locus_tag old_locus_tag gene Name start end strand product note type ID NCBI Sgly_0001 Sgly_0001 Sgly_0001 56 1396 + chromosomal replication initiator protein DnaA COGs: COG0593 ATPase involved in DNA replication initiation~HAMAP: Chromosomal replication control%2C initiator DnaA~InterPro IPR003593: IPR013159: IPR013317: IPR001957~KEGG: dhd:Dhaf_0001 chromosomal replication initiator protein DnaA~PFAM: Chromosomal replication control%2C initiator (DnaA)/regulator (Hda)%3B Chromosomal replication initiator%2C DnaA C-terminal~SMART: Chromosomal replication initiator%2C DnaA C-terminal%3B ATPase%2C AAA+ type%2C core~SPTR: Chromosomal replication initiator protein dnaA%3B~TIGRFAM: Chromosomal replication control%2C initiator DnaA~PFAM: DNA polymerase III polC-type N-terminus%3B domain%3B Bacterial dnaA protein~TIGRFAM: chromosomal replication initiator protein DnaA gene gene0 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0001 Sgly_0002 Sgly_0002 Sgly_0002 1554 2651 + DNA polymerase III%2C beta subunit COGs: COG0592 DNA polymerase sliding clamp subunit (PCNA homolog)~InterPro IPR001001~KEGG: dhd:Dhaf_0002 DNA polymerase III%2C beta subunit~PFAM: DNA polymerase III%2C beta chain~PRIAM: DNA-directed DNA polymerase~SMART: DNA polymerase III%2C beta chain~SPTR: DNA polymerase III beta chain%3B~TIGRFAM: DNA polymerase III%2C beta chain~PFAM: DNA polymerase III beta subunit%2C C-terminal domain%3B DNA polymerase III beta subunit%2C N-terminal domain%3B DNA polymerase III beta subunit%2C central domain~TIGRFAM: DNA polymerase III%2C beta subunit gene gene1 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0002 Sgly_0003 Sgly_0003 Sgly_0003 2656 3756 + DNA replication and repair protein RecF COGs: COG1195 Recombinational DNA repair ATPase (RecF pathway)~HAMAP: DNA replication and repair protein recF~InterPro IPR003395: IPR001238~KEGG: dhd:Dhaf_0003 DNA replication and repair protein RecF~PFAM: RecF/RecN/SMC protein%2C N-terminal~SPTR: DNA replication and repair protein recF%3B~TIGRFAM: DNA-binding%2C RecF~PFAM: RecF/RecN/SMC N terminal domain~TIGRFAM: recF protein gene gene2 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0003 Sgly_0004 Sgly_0004 Sgly_0004 3756 4010 + hypothetical protein KEGG: dhd:Dhaf_0004 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Domain of unknown function (DUF370) gene gene3 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0004 Sgly_0005 Sgly_0005 Sgly_0005 4139 6076 + DNA gyrase subunit B COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit~InterPro IPR003594: IPR001241: IPR013506: IPR006171: IPR 002288: IPR011557~KEGG: dhd:Dhaf_0005 DNA gyrase%2C B subunit~PFAM: DNA topoisomerase%2C type IIA%2C subunit B%2C domain 2%3B ATPase-like%2C ATP-binding domain%3B Toprim domain%3B DNA topoisomerase%2C type IIA%2C subunit B%2C C-terminal~PRIAM: DNA topoisomerase (ATP-hydrolyzing)~SMART: DNA topoisomerase%2C type IIA%2C subunit B/N-terminal%3B ATPase-like%2C ATP-binding domain~SPTR: DNA gyrase subunit B%3B~TIGRFAM: DNA gyrase%2C subunit B~PFAM: Toprim domain%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B DNA gyrase B%3B DNA gyrase B subunit%2C carboxyl terminus~TIGRFAM: DNA gyrase%2C B subunit gene gene4 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0005 Sgly_0006 Sgly_0006 Sgly_0006 6101 8563 + DNA gyrase subunit A COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit~InterPro IPR002205: IPR006691: IPR005743~KEGG: dsy:DSY0006 DNA gyrase subunit A~PFAM: DNA topoisomerase%2C type IIA%2C subunit A/C-terminal%3B DNA gyrase/topoisomerase IV%2C subunit A%2C C-terminal beta-pinwheel~PRIAM: DNA topoisomerase (ATP-hydrolyzing)~SMART: DNA topoisomerase%2C type IIA%2C subunit A/C-terminal~SPTR: DNA gyrase subunit A%3B~TIGRFAM: DNA gyrase%2C subunit A~PFAM: DNA gyrase/topoisomerase IV%2C subunit A%3B DNA gyrase C-terminal domain%2C beta-propeller~TIGRFAM: DNA gyrase%2C A subunit gene gene5 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0006 Sgly_0007 Sgly_0007 Sgly_0007 8619 9506 + pyridoxal phosphate synthase yaaD subunit COGs: COG0214 Pyridoxine biosynthesis enzyme~HAMAP: Vitamin B6 biosynthesis protein~InterPro IPR001852~KEGG: drm:Dred_0617 pyridoxal biosynthesis lyase PdxS~PFAM: Vitamin B6 biosynthesis protein~SPTR: Pyridoxine biosynthesis protein%3B~TIGRFAM: Vitamin B6 biosynthesis protein~PFAM: SOR/SNZ family~TIGRFAM: pyridoxal 5'-phosphate synthase%2C synthase subunit Pdx1 gene gene6 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0007 Sgly_0008 Sgly_0008 Sgly_0008 9508 10089 + pyridoxal phosphate synthase yaaE subunit COGs: COG0311 glutamine amidotransferase involved in pyridoxine biosynthesis~HAMAP: Glutamine amidotransferase subunit pdxT~InterPro IPR002161~KEGG: slp:Slip_0008 SNO glutamine amidotransferase~PFAM: SNO glutamine amidotransferase~SPTR: Glutamine amidotransferase subunit pdxT%3B~TIGRFAM: SNO glutamine amidotransferase~PFAM: SNO glutamine amidotransferase family~TIGRFAM: pyridoxal 5'-phosphate synthase%2C glutaminase subunit Pdx2 gene gene7 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0008 Sgly_0009 Sgly_0009 Sgly_0009 10101 11366 + seryl-tRNA synthetase COGs: COG0172 Seryl-tRNA synthetase~HAMAP: Seryl-tRNA synthetase~InterPro IPR015866: IPR002314: IPR002317~KEGG: dhd:Dhaf_0008 seryl-tRNA synthetase~PFAM: Aminoacyl-tRNA synthetase%2C class II (G/ H/ P/ S)%2C conserved domain%3B Seryl-tRNA synthetase%2C class IIa%2C N-terminal~PRIAM: Serine--tRNA ligase~SPTR: Seryl-tRNA synthetase%3B~TIGRFAM: Seryl-tRNA synthetase%2C class IIa~PFAM: Seryl-tRNA synthetase N-terminal domain%3B tRNA synthetase class II core domain (G%2C H%2C P%2C S and T)~TIGRFAM: seryl-tRNA synthetase gene gene8 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0009 Sgly_0010 Sgly_0010 Sgly_0010 11754 12200 + tRNA-adenosine deaminase COGs: COG0590 Cytosine/adenosine deaminase~InterPro IPR002125~KEGG: dhd:Dhaf_0009 CMP/dCMP deaminase zinc-binding~PFAM: CMP/dCMP deaminase%2C zinc-binding~SPTR: Putative uncharacterized protein%3B~PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region gene gene11 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0010 Sgly_0011 Sgly_0011 Sgly_0011 12640 12885 - pseudogene gene13 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0011 Sgly_0012 Sgly_0012 Sgly_0012 13030 14250 - ATPase COGs: COG1373 ATPase (AAA+ superfamily)~KEGG: dhd:Dhaf_4874 ATPase~SPTR: ATPase gene gene14 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0012 Sgly_0013 Sgly_0013 Sgly_0013 14504 15052 - metallophosphoesterase COGs: COG4186 phosphoesterase or phosphohydrolase~InterPro IPR004843~KEGG: shi:Shel_05520 predicted phosphoesterase or phosphohydrolase~PFAM: Metallophosphoesterase~SPTR: Predicted phosphoesterase or phosphohydrolase gene gene15 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0013 Sgly_0014 Sgly_0014 Sgly_0014 15056 15820 - pseudogene gene16 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0014 Sgly_0015 Sgly_0015 Sgly_0015 16070 16180 + pseudogene gene17 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0015 Sgly_0016 Sgly_0016 Sgly_0016 16989 18200 - integrase family protein COGs: COG4974 Site-specific recombinase XerD~InterPro IPR002104~KEGG: dsy:DSY0010 hypothetical protein~PFAM: Integrase%2C catalytic core%2C phage~SPTR: Putative uncharacterized protein%3B~PFAM: Phage integrase family gene gene19 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0016 Sgly_0017 Sgly_0017 Sgly_0017 18349 18567 - hypothetical protein KEGG: cth:Cthe_0513 DNA binding domain-containing protein~SPTR: Putative uncharacterized protein gene gene20 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0017 Sgly_0018 Sgly_0018 Sgly_0018 18582 18950 - transcriptional modulator of MazE/toxin%2C MazF COGs: COG2337 Growth inhibitor~InterPro IPR003477~KEGG: dsy:DSY0011 hypothetical protein~PFAM: PemK-like protein~SPTR: Putative uncharacterized protein%3B~PFAM: PemK-like protein gene gene21 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0018 Sgly_0019 Sgly_0019 Sgly_0019 19587 20006 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily KEGG: dhd:Dhaf_2435 RNA polymerase%2C sigma-24 subunit%2C ECF subfamily~SPTR: RNA polymerase%2C sigma-24 subunit%2C ECF subfamily%3B~PFAM: Sigma-70%2C region 4 gene gene22 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0019 Sgly_0020 Sgly_0020 Sgly_0020 20585 20792 - pseudogene gene23 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0020 Sgly_0021 Sgly_0021 Sgly_0021 20847 22388 - phospholipase D/Transphosphatidylase COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase~InterPro IPR001736~KEGG: cpy:Cphy_1331 phospholipase D/transphosphatidylase~PFAM: Phospholipase D/Transphosphatidylase~SMART: Phospholipase D/Transphosphatidylase~SPTR:Phosphatidylserine/ phosphatidylglycerophosphate/cardiolipin synthases and related enzymes%3B~PFAM: Phospholipase D Active site motif gene gene24 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0021 Sgly_0022 Sgly_0022 Sgly_0022 22420 22992 - hypothetical protein KEGG: cbb:CLD_3577 putative signal peptidase~SPTR: Putative signal peptidase%3B~PFAM: Signal peptidase (SPase) II gene gene25 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0022 Sgly_0023 Sgly_0023 Sgly_0023 23386 25227 - heavy metal translocating P-type ATPase COGs: COG2217 Cation transport ATPase~InterPro IPR008250: IPR005834: IPR006404: IPR006416: IPR 001757~KEGG: cce:Ccel_0234 cadmium-translocating P-type ATPase~PFAM: ATPase%2C P-type%2C ATPase-associated domain%3B Haloacid dehalogenase-like hydrolase~PRIAM: Cadmium-exporting ATPase~SPTR: Cadmium-exporting ATPase%3B~TIGRFAM: ATPase%2C P-type%2C heavy metal translocating%3B ATPase%2C P-type%2C heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating%3B ATPase%2C P-type%2C K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter~PFAM: E1-E2 ATPase%3B haloacid dehalogenase-like hydrolase~TIGRFAM: heavy metal translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC%3B heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase gene gene26 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0023 Sgly_0024 Sgly_0024 Sgly_0024 25389 25610 - Heavy metal transport/detoxification protein InterPro IPR006121~KEGG: fma:FMG_0054 putative cation-transporting P-type ATPase~PFAM: Heavy metal transport/detoxification protein~SPTR: Cadmium-exporting ATPase%3B~PFAM: Heavy-metal-associated domain gene gene27 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0024 Sgly_0025 Sgly_0025 Sgly_0025 25636 25992 - transcriptional regulator%2C ArsR family COGs: COG0640 transcriptional regulator protein~InterPro IPR001845~KEGG: cpy:Cphy_2129 ArsR family transcriptional regulator~PFAM: HTH transcriptional regulator%2C ArsR~SMART: HTH transcriptional regulator%2C ArsR~SPTR: Cadmium efflux system accessory protein%3B~PFAM: Bacterial regulatory protein%2C arsR family gene gene28 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0025 Sgly_0026 Sgly_0026 Sgly_0026 26381 26776 - protein tyrosine phosphatase COGs: COG0394 Protein-tyrosine-phosphatase~InterPro IPR017867~KEGG: dsy:DSY4671 hypothetical protein~PFAM: Protein-tyrosine phosphatase%2C low molecular weight~SMART: Protein-tyrosine phosphatase%2C low molecular weight~SPTR: Protein tyrosine phosphatase%3B~PFAM: Low molecular weight phosphotyrosine protein phosphatase gene gene29 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0026 Sgly_0027 Sgly_0027 Sgly_0027 26787 28523 - arsenite efflux ATP-binding protein ArsA COGs: COG0003 ATPase involved in chromosome partitioning~InterPro IPR003348~KEGG: dsy:DSY4598 hypothetical protein~PRIAM: Arsenite-transporting ATPase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: ATPase%2C anion-transporting~PFAM: Anion-transporting ATPase~TIGRFAM: arsenite-activated ATPase (arsA)%3B (TC 3.A.4.1.1 gene gene30 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0027 Sgly_0028 Sgly_0028 Sgly_0028 28524 28895 - pseudogene gene31 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0028 Sgly_0029 Sgly_0029 Sgly_0029 28914 29099 - pseudogene gene32 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0029 Sgly_0030 Sgly_0030 Sgly_0030 29100 30152 - arsenical-resistance protein COGs: COG0798 Arsenite efflux pump ACR3 and related permease~InterPro IPR002657: IPR004706~KEGG: dsy:DSY4672 hypothetical protein~PFAM: Bile acid:sodium symporter~SPTR: Arsenical-resistance protein%3B~TIGRFAM: Arsenical-resistance protein ACR3~PFAM: Sodium Bile acid symporter family~TIGRFAM: arsenical-resistance protein gene gene33 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0030 Sgly_0031 Sgly_0031 Sgly_0031 30149 30694 - hypothetical protein KEGG: chy:CHY_1710 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF2703) gene gene34 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0031 Sgly_0032 Sgly_0032 Sgly_0032 30687 31022 - transcriptional regulator%2C ArsR family COGs: COG0640 transcriptional regulator protein~InterPro IPR001845~KEGG: ccb:Clocel_0243 transcriptional regulator%2C ArsR family~PFAM: HTH transcriptional regulator%2C ArsR~SMART: HTH transcriptional regulator%2C ArsR~SPTR: Transcriptional regulator%2C ArsR family%3B~PFAM: Bacterial regulatory protein%2C arsR family gene gene35 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0032 Sgly_0033 Sgly_0033 Sgly_0033 31513 31779 - hypothetical protein KEGG: dsy:DSY0027 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: IclR helix-turn-helix domain gene gene36 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0033 Sgly_0034 Sgly_0034 Sgly_0034 31791 33614 - TRAG family protein COGs: COG3505 Type IV secretory pathway VirD4 protein~InterPro IPR003688~KEGG: dsy:DSY0028 hypothetical protein~PFAM: Ti-type conjugative transfer system%2C TraG-like~SPTR: Putative uncharacterized protein%3B~PFAM: TraG/TraD family gene gene37 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0034 Sgly_0035 Sgly_0035 Sgly_0035 33681 35099 - hypothetical protein KEGG: dsy:DSY0029 hypothetical protein~SPTR: Putative uncharacterized protein gene gene38 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0035 Sgly_0036 Sgly_0036 Sgly_0036 35246 38122 - Sel1 domain protein repeat-containing protein COGs: COG0790 FOG: TPR repeat SEL1 subfamily~InterPro IPR006597~KEGG: dsy:DSY0030 hypothetical protein~PFAM: Sel1-like~SPTR: Putative uncharacterized protein%3B~PFAM: Sel1 repeat gene gene39 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0036 Sgly_0037 Sgly_0037 Sgly_0037 38122 38538 - hypothetical protein KEGG: dsy:DSY0031 hypothetical protein~SPTR: Putative uncharacterized protein gene gene40 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0037 Sgly_0038 Sgly_0038 Sgly_0038 38939 39211 - hypothetical protein KEGG: cim:CIMG_06596 hypothetical protein~SPTR: Putative uncharacterized protein gene gene41 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0038 Sgly_0039 Sgly_0039 Sgly_0039 39208 39468 - hypothetical protein KEGG: cce:Ccel_2747 hypothetical protein~SPTR: Putative uncharacterized protein gene gene42 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0039 Sgly_0040 Sgly_0040 Sgly_0040 39538 41046 - Peptidase M23 COGs: COG0739 Membrane protein related to metalloendopeptidase~InterPro IPR000064: IPR016047~KEGG: dsy:DSY0034 hypothetical protein~PFAM: Peptidase M23%3B NLP/P60~SPTR: Putative uncharacterized protein%3B~PFAM: NlpC/P60 family%3B Peptidase family M23 gene gene43 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0040 Sgly_0041 Sgly_0041 Sgly_0041 41051 41554 - AIG2 family protein InterPro IPR009288~KEGG: dsy:DSY0035 hypothetical protein~PFAM: AIG2-like~SPTR: Putative uncharacterized protein%3B~PFAM: AIG2-like family gene gene44 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0041 Sgly_0042 Sgly_0042 Sgly_0042 41565 42602 - hypothetical protein KEGG: dsy:DSY0036 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Putative amidoligase enzyme gene gene45 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0042 Sgly_0043 Sgly_0043 Sgly_0043 42616 43116 - hypothetical protein KEGG: dsy:DSY0037 hypothetical protein~SPTR: Putative uncharacterized protein gene gene46 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0043 Sgly_0044 Sgly_0044 Sgly_0044 43116 44945 - hypothetical protein COGs: COG3451 Type IV secretory pathway VirB4 protein~KEGG: dsy:DSY0038 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Domain of unknown function DUF87 gene gene47 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0044 Sgly_0045 Sgly_0045 Sgly_0045 45028 45615 - hypothetical protein KEGG: dsy:DSY0042 hypothetical protein~SPTR: Putative uncharacterized protein gene gene48 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0045 Sgly_0046 Sgly_0046 Sgly_0046 45618 45875 - hypothetical protein KEGG: dsy:DSY0043 hypothetical protein~SPTR: Putative uncharacterized protein gene gene49 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0046 Sgly_0047 Sgly_0047 Sgly_0047 45851 48010 - C-5 cytosine-specific DNA methylase COGs: COG0270 Site-specific DNA methylase~InterPro IPR001525~KEGG: dsy:DSY0044 hypothetical protein~PFAM: DNA methylase%2C C-5 cytosine-specific~SPTR: Cytosine-specific methyltransferase%3B~PFAM: C-5 cytosine-specific DNA methylase gene gene50 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0047 Sgly_0048 Sgly_0048 Sgly_0048 48211 49824 + integrase family protein COGs: COG4974 Site-specific recombinase XerD~InterPro IPR002104~KEGG: rha:RHA1_ro08484 integrase/recombinase~PFAM: Integrase%2C catalytic core%2C phage~SPTR: Probable integrase/recombinase%3B~PFAM: Phage integrase family gene gene51 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0048 Sgly_0049 Sgly_0049 Sgly_0049 49821 50789 + integrase family protein COGs: COG4974 Site-specific recombinase XerD~InterPro IPR002104~KEGG: dae:Dtox_1435 integrase family protein~PFAM: Integrase%2C catalytic core%2C phage~SPTR: Putative uncharacterized protein%3B~PFAM: Phage integrase family gene gene52 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0049 Sgly_0050 Sgly_0050 Sgly_0050 50782 51807 + integrase family protein COGs: COG4974 Site-specific recombinase XerD~InterPro IPR004107: IPR002104~KEGG: rha:RHA1_ro08486 integrase/recombinase~PFAM: Integrase%2C catalytic core%2C phage%3B Integrase%2C N-terminal SAM-like%2C phage~SPTR: Site-specific recombinase XerD%3B~PFAM: Phage integrase%2C N-terminal SAM-like domain%3B Phage integrase family gene gene53 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0050 Sgly_0051 Sgly_0051 Sgly_0051 51854 52126 - C-5 cytosine-specific DNA methylase COGs: COG0270 Site-specific DNA methylase~InterPro IPR001525~KEGG: dsy:DSY0044 hypothetical protein~PFAM: DNA methylase%2C C-5 cytosine-specific~SPTR: Cytosine-specific methyltransferase%3B~PFAM: C-5 cytosine-specific DNA methylase gene gene54 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0051 Sgly_0052 Sgly_0052 Sgly_0052 52126 52509 - hypothetical protein KEGG: dsy:DSY4650 hypothetical protein~SPTR: Putative uncharacterized protein gene gene55 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0052 Sgly_0053 Sgly_0053 Sgly_0053 52529 53434 - hypothetical protein KEGG: dsy:DSY0045 hypothetical protein~SPTR: Putative uncharacterized protein gene gene56 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0053 Sgly_0054 Sgly_0054 Sgly_0054 53467 53832 - hypothetical protein KEGG: ptm:GSPATT00022950001 hypothetical protein~SPTR: Chromosome undetermined scaffold_76%2C whole genome shotgun sequence gene gene57 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0054 Sgly_0055 Sgly_0055 Sgly_0055 53891 54229 - hypothetical protein KEGG: lmy:LM5923_1834 hypothetical protein~SPTR: Putative uncharacterized protein gene gene58 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0055 Sgly_0056 Sgly_0056 Sgly_0056 54300 54769 - pseudogene gene59 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0056 Sgly_0057 Sgly_0057 Sgly_0057 54783 56483 - hypothetical protein KEGG: dsy:DSY0052 hypothetical protein~SPTR: Putative uncharacterized protein gene gene60 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0057 Sgly_0058 Sgly_0058 Sgly_0058 56550 57122 - hypothetical protein KEGG: dsy:DSY0053 hypothetical protein~SPTR: Putative uncharacterized protein gene gene61 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0058 Sgly_0059 Sgly_0059 Sgly_0059 57231 57779 - hypothetical protein KEGG: dsy:DSY0054 hypothetical protein~SPTR: Putative uncharacterized protein gene gene62 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0059 Sgly_0060 Sgly_0060 Sgly_0060 57776 58171 - hypothetical protein KEGG: hmo:HM1_0591 hypothetical protein~SPTR: Putative uncharacterized protein gene gene63 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0060 Sgly_0061 Sgly_0061 Sgly_0061 58165 58821 - hypothetical protein KEGG: dsy:DSY0055 hypothetical protein~SPTR: Putative uncharacterized protein gene gene64 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0061 Sgly_0062 Sgly_0062 Sgly_0062 58834 59706 - hypothetical protein KEGG: dsy:DSY0056 hypothetical protein~SPTR: Putative uncharacterized protein gene gene65 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0062 Sgly_0063 Sgly_0063 Sgly_0063 59717 60646 - hypothetical protein KEGG: dsy:DSY0057 hypothetical protein~SPTR: Putative uncharacterized protein gene gene66 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0063 Sgly_0064 Sgly_0064 Sgly_0064 60643 62175 - type II secretion system protein E COGs: COG0630 Type IV secretory pathway VirB11 protein involved in flagella biosynthesis~InterPro IPR001482~KEGG: dsy:DSY0058 hypothetical protein~PFAM: Type II secretion system protein E~SPTR: Putative uncharacterized protein%3B~PFAM: Type II/IV secretion system protein gene gene67 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0064 Sgly_0065 Sgly_0065 Sgly_0065 62169 62984 - hypothetical protein KEGG: lmy:LM5923_1842 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain gene gene68 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0065 Sgly_0066 Sgly_0066 Sgly_0066 62984 63808 - Flp pilus assembly protein CpaB InterPro IPR013974: IPR017592~KEGG: dsy:DSY0060 hypothetical protein~PFAM: SAF domain~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Pilus assembly%2C Flp-type CpaB~PFAM: SAF domain~TIGRFAM: Flp pilus assembly protein CpaB gene gene69 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0066 Sgly_0067 Sgly_0067 Sgly_0067 63837 63971 - hypothetical protein KEGG: cfe:CF0654 hypothetical protein gene gene70 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0067 Sgly_0068 Sgly_0068 Sgly_0068 63968 64420 - peptidase A24A prepilin type IV InterPro IPR000045~KEGG: dsy:DSY0061 hypothetical protein~PFAM: Peptidase A24A%2C prepilin type IV~SPTR: Putative uncharacterized protein%3B~PFAM: Type IV leader peptidase family gene gene71 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0068 Sgly_0069 Sgly_0069 Sgly_0069 64410 64640 - hypothetical protein KEGG: dae:Dtox_1483 hypothetical protein~SPTR: Putative uncharacterized protein gene gene72 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0069 Sgly_0070 Sgly_0070 Sgly_0070 64809 66608 - RNA-directed DNA polymerase (Reverse transcriptase) COGs: COG3344 Retron-type reverse transcriptase~InterPro IPR000477: IPR000442~KEGG: ccb:Clocel_2353 RNA-directed DNA polymerase (reverse transcriptase)~PFAM: RNA-directed DNA polymerase (reverse transcriptase)%3B Intron maturase%2C type II~SPTR: Putative uncharacterized protein%3B~PFAM: Reverse transcriptase (RNA-dependent DNA polymerase)%3B Type II intron maturase gene gene73 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0070 Sgly_0071 Sgly_0071 Sgly_0071 67155 71093 - S-layer domain-containing protein InterPro IPR001119~KEGG: dsy:DSY0062 hypothetical protein~PFAM: S-layer homology domain~SPTR: Putative uncharacterized protein%3B~PFAM: S-layer homology domain gene gene74 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0071 Sgly_0072 Sgly_0072 Sgly_0072 71104 71463 - SpoVG family protein COGs: COG2088 Uncharacterized protein involved in the regulation of septum location~InterPro IPR007170~KEGG: dsy:DSY0063 hypothetical protein~PFAM: Sporulation stage V%2C protein G~SPTR: Putative uncharacterized protein%3B~PFAM: SpoVG gene gene75 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0072 Sgly_0073 Sgly_0073 Sgly_0073 71497 71760 - hypothetical protein KEGG: cce:Ccel_2780 hypothetical protein~SPTR: Putative uncharacterized protein gene gene76 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0073 Sgly_0074 Sgly_0074 Sgly_0074 71817 72371 - hypothetical protein KEGG: dsy:DSY0064 hypothetical protein~SPTR: Putative uncharacterized protein gene gene77 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0074 Sgly_0075 Sgly_0075 Sgly_0075 72413 72985 - hypothetical protein KEGG: dsy:DSY0065 hypothetical protein~SPTR: Putative uncharacterized protein gene gene78 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0075 Sgly_0076 Sgly_0076 Sgly_0076 73049 73879 - D12 class N6 adenine-specific DNA methyltransferase COGs: COG0338 Site-specific DNA methylase~InterPro IPR012327~KEGG: dsy:DSY0067 hypothetical protein~PFAM: D12 class N6 adenine-specific DNA methyltransferase~SPTR: Putative uncharacterized protein%3B~PFAM: D12 class N6 adenine-specific DNA methyltransferase~TIGRFAM: DNA adenine methylase (dam) gene gene79 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0076 Sgly_0077 Sgly_0077 Sgly_0077 73888 74220 - hypothetical protein KEGG: dsy:DSY0068 hypothetical protein~SPTR: Putative uncharacterized protein gene gene80 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0077 Sgly_0078 Sgly_0078 Sgly_0078 74360 74647 - hypothetical protein KEGG: ckl:CKL_3869 hypothetical protein~SPTR: Putative uncharacterized protein gene gene81 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0078 Sgly_0079 Sgly_0079 Sgly_0079 74726 76216 - hypothetical protein KEGG: dhd:Dhaf_2423 hypothetical protein~SPTR: Putative uncharacterized protein gene gene82 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0079 Sgly_0080 Sgly_0080 Sgly_0080 76209 76937 - hypothetical protein KEGG: dsy:DSY0070 hypothetical protein~SPTR: Putative uncharacterized protein gene gene83 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0080 Sgly_0081 Sgly_0081 Sgly_0081 76934 77167 - hypothetical protein KEGG: cce:Ccel_2788 hypothetical protein~SPTR: Putative uncharacterized protein gene gene84 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0081 Sgly_0082 Sgly_0082 Sgly_0082 77257 77847 - hypothetical protein KEGG: dsy:DSY0072 hypothetical protein~SPTR: Putative uncharacterized protein gene gene85 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0082 Sgly_0083 Sgly_0083 Sgly_0083 78252 79535 - integrase family protein COGs: COG4974 Site-specific recombinase XerD~InterPro IPR002104~KEGG: dsy:DSY0010 hypothetical protein~PFAM: Integrase%2C catalytic core%2C phage~SPTR: Putative uncharacterized protein%3B~PFAM: Phage integrase family gene gene86 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0083 Sgly_0084 Sgly_0084 Sgly_0084 79627 79842 - DNA binding domain protein%2C excisionase family InterPro IPR010093~KEGG: cth:Cthe_0513 DNA binding domain-containing protein~SPTR: DNA binding domain%2C excisionase family%3B~TIGRFAM: Excisionase/Xis%2C DNA-binding~TIGRFAM: DNA binding domain%2C excisionase family gene gene87 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0084 Sgly_0085 Sgly_0085 Sgly_0085 80111 81034 + filamentation induced by cAMP protein Fic COGs: COG3177 conserved hypothetical protein~InterPro IPR003812~KEGG: dhd:Dhaf_0086 filamentation induced by cAMP protein Fic~PFAM: Filamentation induced by cAMP/death on curing%2C related~SPTR: Filamentation induced by cAMP protein Fic%3B~PFAM: Fic/DOC family gene gene88 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0085 Sgly_0086 Sgly_0086 Sgly_0086 81193 83370 + hypothetical protein COGs: COG3593 ATP-dependent endonuclease of the OLD family~KEGG: saw:SAHV_0411 hypothetical protein~SPTR: Putative uncharacterized protein gene gene89 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0086 Sgly_0087 Sgly_0087 Sgly_0087 83357 85144 + UvrD/REP helicase COGs: COG0210 Superfamily I DNA and RNA helicase~InterPro IPR000212~KEGG: smb:smi_1319 hypothetical protein~PFAM: DNA helicase%2C UvrD/REP type~SPTR: Putative uncharacterized protein%3B~PFAM: UvrD/REP helicase gene gene90 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0087 Sgly_0088 Sgly_0088 Sgly_0088 85209 85958 + hypothetical protein KEGG: ecy:ECSE_0286 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF2971) gene gene91 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0088 Sgly_0089 Sgly_0089 Sgly_0089 86051 90577 + pentapeptide repeat protein COGs: COG0610 Type I site-specific restriction-modification system R (restriction) subunit and related helicase~InterPro IPR014001: IPR006935: IPR001646~KEGG: mja:MJECL40 type I restriction enzyme subunit R~PFAM: Pentapeptide repeat%3B Restriction endonuclease%2C type I%2C R subunit/Type III%2C Res subunit~SMART: DEAD-like helicase%2C N-terminal~SPTR: Putative type-1 restriction enzyme MjaXP R protein%3B~PFAM: Pentapeptide repeats (8 copies)%3B Type III restriction enzyme%2C res subunit%3B NACHT domain gene gene92 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0089 Sgly_0090 Sgly_0090 Sgly_0090 90827 91558 - IstB domain protein ATP-binding protein COGs: COG1484 DNA replication protein~InterPro IPR003593: IPR002611~KEGG: dsy:DSY0836 hypothetical protein~PFAM: IstB-like ATP-binding protein~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: IstB-like ATP binding protein gene gene93 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0090 Sgly_0091 Sgly_0091 Sgly_0091 91558 93066 - Integrase catalytic region COGs: COG4584 Transposase and inactivated derivatives~InterPro IPR001584~KEGG: bha:BH3965 transposase (22)~PFAM: Integrase%2C catalytic core~SPTR: Integrase catalytic region%3B~PFAM: Integrase core domain gene gene94 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0091 Sgly_0092 Sgly_0092 Sgly_0092 93201 93422 - DNA binding domain protein%2C excisionase family InterPro IPR010093~KEGG: cth:Cthe_0513 DNA binding domain-containing protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Excisionase/Xis%2C DNA-binding~TIGRFAM: DNA binding domain%2C excisionase family gene gene95 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0092 Sgly_0093 Sgly_0093 Sgly_0093 93685 93898 - pseudogene gene96 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0093 Sgly_0094 Sgly_0094 Sgly_0094 94025 95251 + putative GTP-binding protein COGs: COG1373 ATPase (AAA+ superfamily)~KEGG: dhd:Dhaf_0124 putative GTP-binding protein~SPTR: Putative GTP-binding protein gene gene97 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0094 Sgly_0095 Sgly_0095 Sgly_0095 95569 96249 - hypothetical protein KEGG: cpy:Cphy_1439 transposase IS4 family protein~SPTR: Transposase IS4 family protein gene gene98 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0095 Sgly_0096 Sgly_0096 Sgly_0096 96827 97979 - transposase protein InterPro IPR002514~KEGG: cth:Cthe_2772 transposase IS3/IS911~PFAM: Transposase IS3/IS911~SPTR: Transposase IS3/IS911%3B~manually curated~PFAM: Integrase core domain%3B Transposase gene gene99 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0096 Sgly_0097 Sgly_0097 Sgly_0097 98178 98927 + filamentation induced by cAMP protein Fic COGs: COG3177 conserved hypothetical protein~InterPro IPR003812~KEGG: dsy:DSY0147 hypothetical protein~PFAM: Filamentation induced by cAMP/death on curing%2C related~SPTR: Putative uncharacterized protein%3B~PFAM: Fic/DOC family gene gene100 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0097 Sgly_0098 Sgly_0098 Sgly_0098 99053 100156 - hypothetical protein KEGG: aoe:Clos_2182 hypothetical protein~SPTR: Putative uncharacterized protein gene gene101 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0098 Sgly_0099 Sgly_0099 Sgly_0099 100159 100677 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog~InterPro IPR007627: IPR013249: IPR014284~KEGG: aoe:Clos_2183 ECF subfamily RNA polymerase sigma-24 factor~PFAM: RNA polymerase sigma-70 region 2%3B RNA polymerase sigma factor 70%2C region 4 type 2~SPTR: RNA polymerase%2C sigma-24 subunit%2C ECF subfamily%3B~TIGRFAM: RNA polymerase sigma-70~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family gene gene102 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0099 Sgly_0100 Sgly_0100 Sgly_0100 101130 101609 + pseudogene gene103 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0100 Sgly_0101 Sgly_0101 Sgly_0101 101859 102968 + beta-lactamase COGs: COG1680 Beta-lactamase class C and other penicillin binding protein~InterPro IPR001466~KEGG: bmq:BMQ_1731 beta-lactamase~PFAM: Beta-lactamase-related~SPTR: Beta-lactamase%3B~PFAM: Beta-lactamase gene gene104 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0101 Sgly_0102 Sgly_0102 Sgly_0102 103140 103793 + pseudogene gene105 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0102 Sgly_0103 Sgly_0103 Sgly_0103 104718 105290 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog~InterPro IPR007627: IPR013249: IPR014284~KEGG: dhd:Dhaf_3330 RNA polymerase%2C sigma-24 subunit%2C ECF subfamily~PFAM: RNA polymerase sigma factor 70%2C region 4 type 2%3B RNA polymerase sigma-70 region 2~SPTR: RNA polymerase%2C sigma-24 subunit%2C ECF subfamily%3B~TIGRFAM: RNA polymerase sigma-70~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family gene gene106 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0103 Sgly_0104 Sgly_0104 Sgly_0104 105280 106047 + hypothetical protein KEGG: dhd:Dhaf_3329 hypothetical protein~SPTR: Putative uncharacterized protein gene gene107 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0104 Sgly_0105 Sgly_0105 Sgly_0105 106119 106559 + hypothetical protein KEGG: dhd:Dhaf_3328 hypothetical protein~SPTR: Putative uncharacterized protein gene gene108 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0105 Sgly_0106 Sgly_0106 Sgly_0106 106643 107047 + hypothetical protein KEGG: ttm:Tthe_2288 hypothetical protein~SPTR: Putative uncharacterized protein gene gene109 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0106 Sgly_0107 Sgly_0107 Sgly_0107 107155 107985 + hypothetical protein KEGG: ttm:Tthe_2287 hypothetical protein~SPTR: Putative uncharacterized protein gene gene110 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0107 Sgly_0108 Sgly_0108 Sgly_0108 108032 108769 + hypothetical protein KEGG: ttm:Tthe_2286 hypothetical protein~SPTR: Putative uncharacterized protein gene gene111 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0108 Sgly_0109 Sgly_0109 Sgly_0109 108769 109566 + hypothetical protein KEGG: ttm:Tthe_2285 hypothetical protein~SPTR: Putative uncharacterized protein gene gene112 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0109 Sgly_0110 Sgly_0110 Sgly_0110 109594 110235 + ABC transporter related protein COGs: COG1131 ABC-type multidrug transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: ttm:Tthe_2284 ABC transporter related~PFAM: ABC transporter-like~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related%3B~PFAM: ABC transporter gene gene113 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0110 Sgly_0111 Sgly_0111 Sgly_0111 110255 110944 + hypothetical protein KEGG: ttm:Tthe_2283 hypothetical protein~SPTR: Putative uncharacterized protein gene gene114 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0111 Sgly_0112 Sgly_0112 Sgly_0112 111193 112080 + degV family protein COGs: COG1307 conserved hypothetical protein~InterPro IPR003797~KEGG: dhd:Dhaf_0606 DegV family protein~PFAM: DegV~SPTR: DegV family protein%3B~TIGRFAM: DegV~PFAM: Uncharacterised protein%2C DegV family COG1307~TIGRFAM: EDD domain protein%2C DegV family gene gene115 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0112 Sgly_0113 Sgly_0113 Sgly_0113 112213 112641 + GCN5-related N-acetyltransferase InterPro IPR000182~KEGG: dhd:Dhaf_0960 GCN5-related N-acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: GCN5-related N-acetyltransferase%3B~PFAM: Acetyltransferase (GNAT) family gene gene116 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0113 Sgly_0114 Sgly_0114 Sgly_0114 112914 113384 + hypothetical protein KEGG: amt:Amet_2127 hypothetical protein~SPTR: Putative uncharacterized protein gene gene117 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0114 Sgly_0115 Sgly_0115 Sgly_0115 113421 115460 - ferrous iron transport protein B COGs: COG0370 Fe2+ transport system protein B~InterPro IPR002917: IPR011619: IPR011642: IPR011640: IPR 005225: IPR003373~KEGG: cbt:CLH_2778 ferrous iron transport protein B~PFAM: GTP-binding protein%2C HSR1-related%3B Ferrous iron transport protein B%2C N-terminal%3B Nucleoside recognition%3B Ferrous iron transport protein B%2C C-terminal~SPTR: Ferrous iron transport protein B%3B~TIGRFAM: Ferrous iron transport protein B%3B Small GTP-binding protein~PFAM: Ferrous iron transport protein B%3B Ferrous iron transport protein B C terminus%3B Nucleoside recognition~TIGRFAM: ferrous iron transporter FeoB%3B small GTP-binding protein domain gene gene118 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0115 Sgly_0116 Sgly_0116 Sgly_0116 115492 115716 - FeoA family protein COGs: COG1918 Fe2+ transport system protein A~InterPro IPR007167~KEGG: cbt:CLH_2779 hypothetical protein~PFAM: Ferrous iron transporter%2C FeoA subunit~SPTR: Putative uncharacterized protein%3B~PFAM: FeoA domain gene gene119 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0116 Sgly_0117 Sgly_0117 Sgly_0117 115730 115951 - FeoA family protein InterPro IPR007167~KEGG: dhd:Dhaf_3461 FeoA family protein~PFAM: Ferrous iron transporter%2C FeoA subunit~SPTR: Putative uncharacterized protein%3B~PFAM: FeoA domain gene gene120 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0117 Sgly_0118 Sgly_0118 Sgly_0118 115988 117097 - diguanylate cyclase COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain~InterPro IPR000160~KEGG: abo:ABO_1262 GGDEF domain-containing protein~PFAM: Diguanylate cyclase%2C predicted~SMART: Diguanylate cyclase%2C predicted~SPTR: GGDEF domain protein%3B~TIGRFAM: Diguanylate cyclase%2C predicted~PFAM: GGDEF domain~TIGRFAM: diguanylate cyclase (GGDEF) domain gene gene121 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0118 Sgly_0119 Sgly_0119 Sgly_0119 117289 119106 + diguanylate cyclase/phosphodiesterase COGs: COG2200 FOG: EAL domain~InterPro IPR000160: IPR001633~KEGG: cdf:CD1476 putative signaling protein~PFAM: Diguanylate phosphodiesterase%2C predicted%3B Diguanylate cyclase%2C predicted~SMART: Diguanylate phosphodiesterase%2C predicted%3B Diguanylate cyclase%2C predicted~SPTR: Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S)%3B~TIGRFAM: Diguanylate cyclase%2C predicted~PFAM: EAL domain%3B GGDEF domain~TIGRFAM: diguanylate cyclase (GGDEF) domain gene gene122 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0119 Sgly_0120 Sgly_0120 Sgly_0120 119223 119534 - Rubrerythrin InterPro IPR003251~KEGG: mmx:MmarC6_1061 hypothetical protein~PFAM: Rubrerythrin~SPTR: Putative uncharacterized protein%3B~PFAM: Rubrerythrin gene gene123 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0120 Sgly_0121 Sgly_0121 Sgly_0121 119841 121361 + methyl-accepting chemotaxis sensory transducer with Cache sensor COGs: COG0840 Methyl-accepting chemotaxis protein~InterPro IPR004089: IPR004010~KEGG: ttm:Tthe_2066 methyl-accepting chemotaxis sensory transducer with cache sensor~PFAM: Chemotaxis methyl-accepting receptor%2C signalling%3B Cache~SMART: Chemotaxis methyl-accepting receptor%2C signalling~SPTR: Methyl-accepting chemotaxis sensory transducer with Cache sensor%3B~PFAM: Cache domain%3B Methyl-accepting chemotaxis protein (MCP) signaling domain gene gene124 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0121 Sgly_0122 Sgly_0122 Sgly_0122 121864 122490 + Resolvase domain protein InterPro IPR006119~KEGG: bcz:pE33L54_0049 recombinase~PFAM: Resolvase%2C N-terminal~SPTR: Recombinase%3B~PFAM: Resolvase%2C N terminal domain gene gene125 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0122 Sgly_0123 Sgly_0123 Sgly_0123 122792 124840 + NADH dehydrogenase (quinone) COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit~InterPro IPR001750~KEGG: nde:NIDE4265 formate hydrogenlyase%2C membrane subunit~PFAM: NADH:ubiquinone/plastoquinone oxidoreductase~PRIAM: NADH dehydrogenase (quinone)~SPTR: Formate hydrogenlyase%2C membrane subunit%3B~PFAM: NADH-Ubiquinone/plastoquinone (complex I)%2C various chains gene gene126 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0123 Sgly_0124 Sgly_0124 Sgly_0124 124853 125797 + respiratory-chain NADH dehydrogenase subunit 1 COGs: COG0650 Formate hydrogenlyase subunit 4~InterPro IPR001694~KEGG: nde:NIDE4264 putative formate hydrogenlyase%2C membrane subunit~PFAM: NADH:ubiquinone oxidoreductase%2C subunit 1~SPTR: Similar to membrane-bound [NiFe]-hydrogenase-3%2C subunit D%3B~PFAM: NADH dehydrogenase gene gene127 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0124 Sgly_0125 Sgly_0125 Sgly_0125 125802 126458 + hydrogenase%2C membrane subunit 2-like protein COGs: COG4237 Hydrogenase 4 membrane component (E)~KEGG: rci:RCIX2385 hydrogenase%2C membrane subunit 2-like protein~SPTR: Hydrogenase%2C membrane subunit 2-like protein gene gene128 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0125 Sgly_0126 Sgly_0126 Sgly_0126 126464 127924 + NADH dehydrogenase (quinone) COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit~InterPro IPR001750~KEGG: rci:RCIX2384 hydrogenase%2C membrane subunit 1-like protein (EchA-like)~PFAM: NADH:ubiquinone/plastoquinone oxidoreductase~PRIAM: NADH dehydrogenase (quinone)~SPTR: Hydrogenase%2C membrane subunit 1-like protein (EchA-like)%3B~PFAM: NADH-Ubiquinone/plastoquinone (complex I)%2C various chains gene gene129 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0126 Sgly_0127 Sgly_0127 Sgly_0127 127924 129513 + NADH dehydrogenase (ubiquinone) 30 kDa subunit COGs: COG3261 Ni Fe-hydrogenase III large subunit~InterPro IPR001268: IPR001501: IPR001135~KEGG: dae:Dtox_0795 NADH dehydrogenase (ubiquinone) 30 kDa subunit~PFAM: NADH:ubiquinone oxidoreductase%2C 30kDa subunit%3B Nickel-dependent hydrogenase%2C large subunit%3B NADH-quinone oxidoreductase%2C subunit D~SPTR: Similar to membrane-bound [NiFe]-hydrogenase-3%2C large subunit (Chain E)%3B~PFAM: Respiratory-chain NADH dehydrogenase%2C 30 Kd subunit%3B Respiratory-chain NADH dehydrogenase%2C 49 Kd subunit%3B Nickel-dependent hydrogenase gene gene130 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0127 Sgly_0128 Sgly_0128 Sgly_0128 129523 130266 + NADH dehydrogenase (quinone) COGs: COG3260 Ni Fe-hydrogenase III small subunit~InterPro IPR006137~KEGG: cce:Ccel_1686 NADH ubiquinone oxidoreductase 20 kDa subunit~PFAM: NADH:ubiquinone oxidoreductase-like%2C 20kDa subunit~PRIAM: NADH dehydrogenase (quinone)~SPTR: Strongly similar to membrane-bound [NiFe]-hydrogenase-3%2C small subunit (Chain G)%3B~PFAM: NADH ubiquinone oxidoreductase%2C 20 Kd subunit gene gene131 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0128 Sgly_0129 Sgly_0129 Sgly_0129 130509 130898 + toxin secretion/phage lysis holin COGs: COG4824 Phage-related holin (Lysis protein)~InterPro IPR006480~KEGG: amt:Amet_4016 toxin secretion/phage lysis holin~PFAM: Holin%2C toxin secretion/phage lysis~SPTR: Holin%3B~TIGRFAM: Holin%2C toxin secretion/phage lysis~PFAM: Holin family~TIGRFAM: toxin secretion/phage lysis holin gene gene132 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0129 Sgly_0130 Sgly_0130 Sgly_0130 131053 131946 + phosphate ABC transporter substrate-binding protein%2C PhoT family COGs: COG0226 ABC-type phosphate transport system periplasmic component~InterPro IPR006059: IPR011862~KEGG: thx:Thet_0942 phosphate-binding protein~PFAM: Bacterial extracellular solute-binding%2C family 1~SPTR: Phosphate binding protein%3B~TIGRFAM: Phosphate binding protein~PFAM: Bacterial extracellular solute-binding protein~TIGRFAM: phosphate binding protein gene gene133 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0130 Sgly_0131 Sgly_0131 Sgly_0131 132053 132976 + phosphate ABC transporter membrane protein 1%2C PhoT family COGs: COG0573 ABC-type phosphate transport system permease component~InterPro IPR000515: IPR011864~KEGG: tpd:Teth39_0828 phosphate ABC transporter%2C inner membrane subunit PstC~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Phosphate ABC transporter%2C inner membrane subunit PstC%3B~TIGRFAM: Phosphate ABC transporter%2C permease protein PstC~PFAM: Binding-protein-dependent transport system inner membrane component~TIGRFAM: phosphate ABC transporter%2C permease protein PstC%3B phosphate ABC transporter%2C permease protein PstA gene gene134 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0131 Sgly_0132 Sgly_0132 Sgly_0132 132960 133868 + phosphate ABC transporter membrane protein 2%2C PhoT family COGs: COG0581 ABC-type phosphate transport system permease component~InterPro IPR000515: IPR005672~KEGG: tte:TTE1629 ABC-type phosphate transport system%2C permease component~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Phosphate ABC transporter%2C inner membrane subunit PstA%3B~TIGRFAM: Phosphate transport system permease protein 2~PFAM: Binding-protein-dependent transport system inner membrane component~TIGRFAM: phosphate ABC transporter%2C permease protein PstA gene gene135 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0132 Sgly_0133 Sgly_0133 Sgly_0133 133901 134662 + phosphate ABC transporter ATP-binding protein%2C PhoT family COGs: COG1117 ABC-type phosphate transport system ATPase component~InterPro IPR003593: IPR003439: IPR005670~KEGG: cce:Ccel_2104 phosphate ABC transporter%2C ATPase subunit~PFAM: ABC transporter-like~PRIAM: Phosphate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Phosphate ABC transporter%2C ATPase subunit%3B~TIGRFAM: Phosphate transport system permease protein 1~PFAM: ABC transporter~TIGRFAM: phosphate ABC transporter%2C ATP-binding protein gene gene136 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0133 Sgly_0134 Sgly_0134 Sgly_0134 134693 135379 + phosphate uptake regulator%2C PhoU COGs: COG0704 Phosphate uptake regulator~InterPro IPR008170~KEGG: cce:Ccel_2105 phosphate uptake regulator%2C PhoU~PFAM: PhoU~SPTR: Phosphate uptake regulator%2C PhoU%3B~TIGRFAM: PhoU~PFAM: PhoU domain~TIGRFAM: phosphate transport system regulatory protein PhoU gene gene137 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0134 Sgly_0135 Sgly_0135 Sgly_0135 135406 136140 + two component transcriptional regulator%2C winged helix family COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR001789: IPR001867~KEGG: cce:Ccel_2106 two component transcriptional regulator%2C winged helix family~PFAM: Signal transduction response regulator%2C receiver domain%3B Signal transduction response regulator%2C C-terminal~SMART: Signal transduction response regulator%2C receiver domain~SPTR: Two component transcriptional regulator%2C winged helix family%3B~PFAM: Response regulator receiver domain%3B Transcriptional regulatory protein%2C C terminal gene gene138 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0135 Sgly_0136 Sgly_0136 Sgly_0136 136137 137924 + multi-sensor signal transduction histidine kinase COGs: COG5002 Signal transduction histidine kinase~InterPro IPR003660: IPR003661: IPR003594: IPR013767~KEGG: cce:Ccel_2107 histidine kinase~PFAM: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain%3B HAMP linker domain%3B PAS fold~SMART: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain%3B HAMP linker domain~SPTR: Histidine kinase%3B~PFAM: HAMP domain%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain%3B PAS fold~TIGRFAM: PAS domain S-box gene gene139 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0136 Sgly_0137 Sgly_0137 Sgly_0137 137952 139766 - diguanylate cyclase/phosphodiesterase COGs: COG2200 FOG: EAL domain~InterPro IPR001633: IPR000160~KEGG: cbe:Cbei_3303 diguanylate cyclase/phosphodiesterase~PFAM: Diguanylate phosphodiesterase%2C predicted%3B Diguanylate cyclase%2C predicted~SMART: Diguanylate phosphodiesterase%2C predicted%3B Diguanylate cyclase%2C predicted~SPTR: Diguanylate cyclase/phosphodiesterase%3B~PFAM: EAL domain%3B GGDEF domain~TIGRFAM: diguanylate cyclase (GGDEF) domain gene gene140 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0137 Sgly_0138 Sgly_0138 Sgly_0138 139838 140635 - diguanylate phosphodiesterase COGs: COG2200 FOG: EAL domain~InterPro IPR001633~KEGG: cac:CA_C2702 signal transduction protein~PFAM: Diguanylate phosphodiesterase%2C predicted~SMART: Diguanylate phosphodiesterase%2C predicted~SPTR: Possible signal transduction protein (Containing EAL%2C CBS and GGDEF domains)%3B~PFAM: EAL domain gene gene141 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0138 Sgly_0139 Sgly_0139 Sgly_0139 140766 140981 - 4Fe-4S ferredoxin iron-sulfur binding domain protein KEGG: dae:Dtox_2731 4Fe-4S ferredoxin iron-sulfur binding domain protein~SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein%3B~PFAM: 4Fe-4S binding domain gene gene142 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0139 Sgly_0140 Sgly_0140 Sgly_0140 140978 141601 - Lytic transglycosylase catalytic COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains)~InterPro IPR008258~KEGG: cbb:CLD_1248 Slt family transglycosylase~PFAM: Lytic transglycosylase-like%2C catalytic~SPTR: Transglycosylase%2C SLT family%3B~PFAM: Transglycosylase SLT domain gene gene143 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0140 Sgly_0141 Sgly_0141 Sgly_0141 141790 142512 + HAD-superfamily hydrolase%2C subfamily IA%2C variant 1 COGs: COG1011 hydrolase (HAD superfamily)~InterPro IPR005834: IPR006439~KEGG: amr:AM1_3122 haloacid dehalogenase-like hydrolase~PFAM: Haloacid dehalogenase-like hydrolase~SPTR: Haloacid dehalogenase-like hydrolase%3B~TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 1~PFAM: haloacid dehalogenase-like hydrolase~TIGRFAM: haloacid dehalogenase superfamily%2C subfamily IA%2C variant 1 with third motif having Dx(3-4)D or Dx(3-4)E gene gene144 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0141 Sgly_0142 Sgly_0142 Sgly_0142 142748 143767 + secretion protein HlyD family protein COGs: COG1566 Multidrug resistance efflux pump~InterPro IPR006143~KEGG: slp:Slip_0727 secretion protein HlyD family protein~PFAM: Secretion protein HlyD~SPTR: Secretion protein HlyD family protein%3B~PFAM: HlyD family secretion protein gene gene145 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0142 Sgly_0143 Sgly_0143 Sgly_0143 143764 144642 + Sulfate-transporting ATPase COGs: COG1131 ABC-type multidrug transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: drm:Dred_1587 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Sulfate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related%3B~PFAM: ABC transporter gene gene146 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0143 Sgly_0144 Sgly_0144 Sgly_0144 144646 145557 + Sulfate-transporting ATPase COGs: COG1131 ABC-type multidrug transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: pth:PTH_1515 ABC-type multidrug transport system%2C ATPase component~PFAM: ABC transporter-like~PRIAM: Sulfate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC-type multidrug transport system%2C ATPase component%3B~PFAM: ABC transporter gene gene147 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0144 Sgly_0145 Sgly_0145 Sgly_0145 145554 146669 + ABC-2 type transporter COGs: COG0842 ABC-type multidrug transport system permease component~InterPro IPR013525~KEGG: slp:Slip_0730 ABC-2 type transporter~PFAM: ABC-2 type transporter~SPTR: ABC-2 type transporter%3B~PFAM: ABC-2 type transporter~TIGRFAM: ABC transporter efflux protein%2C DrrB family gene gene148 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0145 Sgly_0146 Sgly_0146 Sgly_0146 146680 147249 + regulatory protein TetR InterPro IPR001647~KEGG: pth:PTH_1513 transcriptional regulator~PFAM: Transcription regulator%2C TetR-like%2C DNA-binding%2C bacterial/archaeal~SPTR: Transcriptional regulator%3B~PFAM: Bacterial regulatory proteins%2C tetR family gene gene149 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0146 Sgly_0147 Sgly_0147 Sgly_0147 147401 148945 + Ppx/GppA phosphatase COGs: COG0248 Exopolyphosphatase~InterPro IPR003607: IPR003695: IPR006674~KEGG: pmo:Pmob_0465 exopolyphosphatase-like protein~PFAM: Metal-dependent phosphohydrolase%2C HD subdomain%3B Ppx/GppA phosphatase~SMART: Metal-dependent phosphohydrolase%2C HD domain~SPTR: Exopolyphosphatase-like protein%3B~PFAM: HD domain%3B Ppx/GppA phosphatase family gene gene150 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0147 Sgly_0148 Sgly_0148 Sgly_0148 148935 151016 + Polyphosphate kinase COGs: COG0855 Polyphosphate kinase~HAMAP: Polyphosphate kinase~InterPro IPR003414~KEGG: hmo:HM1_0232 polyphosphate kinase~PFAM: Polyphosphate kinase~PRIAM: Polyphosphate kinase~SPTR: Polyphosphate kinase%3B~TIGRFAM: Polyphosphate kinase~PFAM: Polyphosphate kinase~TIGRFAM: polyphosphate kinase 1 gene gene151 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0148 Sgly_0149 Sgly_0149 Sgly_0149 151093 152589 + Ppx/GppA phosphatase COGs: COG0248 Exopolyphosphatase~InterPro IPR003695~KEGG: drm:Dred_1179 Ppx/GppA phosphatase~PFAM: Ppx/GppA phosphatase~PRIAM: Guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase~SPTR: Ppx/GppA phosphatase%3B~PFAM: Ppx/GppA phosphatase family~TIGRFAM: exopolyphosphatase gene gene152 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0149 Sgly_0150 Sgly_0150 Sgly_0150 153528 154685 + aldo/keto reductase COGs: COG1453 oxidoreductase of the aldo/keto reductase family~InterPro IPR001395~KEGG: tma:TM1183 aldo/keto reductase family oxidoreductase~PFAM: Aldo/keto reductase~SPTR: Oxidoreductase%2C aldo/keto reductase family%3B~PFAM: Aldo/keto reductase family gene gene154 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0150 Sgly_0151 Sgly_0151 Sgly_0151 155070 157346 + diguanylate cyclase COGs: COG2199 FOG: GGDEF domain~InterPro IPR000160~KEGG: slp:Slip_1139 diguanylate cyclase/phosphodiesterase with GAF sensor~PFAM: Diguanylate cyclase%2C predicted~SMART: Diguanylate cyclase%2C predicted~SPTR: Diguanylate cyclase/phosphodiesterase%3B~TIGRFAM: Diguanylate cyclase%2C predicted~PFAM: GGDEF domain~TIGRFAM: diguanylate cyclase (GGDEF) domain gene gene155 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0151 Sgly_0152 Sgly_0152 Sgly_0152 157420 158928 + amine oxidase COGs: COG1233 Phytoene dehydrogenase and related protein~InterPro IPR002937~KEGG: ccb:Clocel_0454 amine oxidase~PFAM: Amine oxidase~SPTR: Amine oxidase%3B~PFAM: Flavin containing amine oxidoreductase gene gene156 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0152 Sgly_0153 Sgly_0153 Sgly_0153 158959 161712 + metallophosphoesterase InterPro IPR004843~KEGG: tit:Thit_1870 metallophosphoesterase~PFAM: Metallophosphoesterase~SPTR: Predicted protein%3B~PFAM: Calcineurin-like phosphoesterase%3B NACHT domain gene gene157 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0153 Sgly_0154 Sgly_0154 Sgly_0154 161748 162572 - protein of unknown function DUF1980 COGs: COG3689 membrane protein~InterPro IPR015402~KEGG: dhd:Dhaf_0048 protein of unknown function DUF1980~PFAM: Protein of unknown function DUF1980~SPTR: Putative uncharacterized protein%3B~PFAM: Domain of unknown function (DUF1980) gene gene158 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0154 Sgly_0155 Sgly_0155 Sgly_0155 162575 164149 - Protein of unknown function DUF318%2C transmembrane COGs: COG0701 permease~InterPro IPR005524~KEGG: dhd:Dhaf_0047 permease~PFAM: Protein of unknown function DUF318%2C transmembrane~SPTR: Permease%3B~PFAM: CobW/HypB/UreG%2C nucleotide-binding domain%3B Predicted permease gene gene159 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0155 Sgly_0156 Sgly_0156 Sgly_0156 164154 165086 - cobalamin synthesis protein P47K COGs: COG0523 Putative GTPase (G3E family)~InterPro IPR003495: IPR011629~KEGG: dhd:Dhaf_0046 cobalamin synthesis protein P47K~PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like%3B Cobalamin (vitamin B12) biosynthesis CobW-like%2C C-terminal~SPTR: Cobalamin synthesis protein P47K%3B~PFAM: CobW/HypB/UreG%2C nucleotide-binding domain%3B Cobalamin synthesis protein cobW C-terminal domain~TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein MobB gene gene160 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0156 Sgly_0157 Sgly_0157 Sgly_0157 165128 165541 - ferric uptake regulator%2C Fur family COGs: COG0735 Fe2+/Zn2+ uptake regulation protein~InterPro IPR002481~KEGG: dsy:DSY0106 hypothetical protein~PFAM: Ferric-uptake regulator~SPTR: Putative uncharacterized protein%3B~PFAM: Ferric uptake regulator family gene gene161 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0157 Sgly_0158 Sgly_0158 Sgly_0158 165660 166484 - ABC-3 protein COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components~InterPro IPR001626~KEGG: vpr:Vpar_0238 ABC-3 protein~PFAM: ABC-3~SPTR: ABC-3 protein%3B~PFAM: ABC 3 transport family gene gene162 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0158 Sgly_0159 Sgly_0159 Sgly_0159 166503 167156 - ABC transporter related protein COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component~InterPro IPR003593: IPR003439~KEGG: vpr:Vpar_0239 ABC transporter related protein~PFAM: ABC transporter-like~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related protein%3B~PFAM: ABC transporter gene gene163 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0159 Sgly_0160 Sgly_0160 Sgly_0160 167299 168210 + periplasmic solute binding protein COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin~InterPro IPR006127~KEGG: clj:CLJU_c37880 putative metal-binding protein~PFAM: ABC transporter metal-binding lipoprotein~SPTR: Putative uncharacterized protein%3B~PFAM: Periplasmic solute binding protein family gene gene164 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0160 Sgly_0161 Sgly_0161 Sgly_0161 168695 170290 + DNA polymerase III%2C tau subunit COGs: COG2812 DNA polymerase III gamma/tau subunits~InterPro IPR003593: IPR003959: IPR012763~KEGG: dhd:Dhaf_0050 DNA polymerase III%2C subunits gamma and tau~PFAM: ATPase%2C AAA-type%2C core~SMART: ATPase%2C AAA+ type%2C core~SPTR: DNA polymerase III%2C subunits gamma and tau%3B~TIGRFAM: DNA polymerase III%2C subunit gamma/ tau~PFAM: ATPase family associated with various cellular activities (AAA)%3B DNA polymerase III subunits gamma and tau domain III~TIGRFAM: DNA polymerase III%2C delta' subunit%3B DNA polymerase III%2C subunit gamma and tau gene gene166 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0161 Sgly_0162 Sgly_0162 Sgly_0162 170356 170691 + UPF0133 protein ybaB COGs: COG0718 conserved hypothetical protein~HAMAP: Uncharacterised protein family UPF0133~InterPro IPR004401~KEGG: dhd:Dhaf_0051 hypothetical protein~PFAM: Uncharacterised protein family UPF0133~SPTR: UPF0133 protein DSY0112%3B~TIGRFAM: Uncharacterised protein family UPF0133~PFAM: Uncharacterised BCR%2C YbaB family COG0718~TIGRFAM: DNA-binding protein%2C YbaB/EbfC family gene gene167 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0162 Sgly_0163 Sgly_0163 Sgly_0163 170716 171312 + DNA replication and repair protein RecR COGs: COG0353 Recombinational DNA repair protein (RecF pathway)~HAMAP: RecR protein~InterPro IPR006154: IPR015967: IPR006171: IPR000093~KEGG: dhd:Dhaf_0052 recombination protein RecR~PFAM: Toprim domain%3B Zinc finger C4-type%2C RecR~SMART: Toprim domain%2C subgroup~SPTR: Recombination protein recR%3B~TIGRFAM: RecR protein~PFAM: Toprim domain%3B RecR protein~TIGRFAM: recombination protein RecR gene gene168 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0163 Sgly_0164 Sgly_0164 Sgly_0164 171411 171665 + sigmaK-factor processing regulatory BofA InterPro IPR010001~KEGG: dsy:DSY0114 hypothetical protein~PFAM: SigmaK-factor processing regulatory BofA~SPTR: Putative uncharacterized protein%3B~PFAM: SigmaK-factor processing regulatory protein BofA~TIGRFAM: pro-sigmaK processing inhibitor BofA gene gene169 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0164 Sgly_0165 Sgly_0165 Sgly_0165 172238 175774 + pyruvate ferredoxin/flavodoxin oxidoreductase COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit~InterPro IPR002880: IPR019752: IPR019456: IPR011766: IPR 011895~KEGG: dhd:Dhaf_0054 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein~PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase%2C N-terminal%3B Pyruvate/ketoisovalerate oxidoreductase%2C catalytic domain%3B Pyruvate-flavodoxin oxidoreductase%2C EKR domain%3B Thiamine pyrophosphate enzyme%2C C-terminal TPP-binding~PRIAM: Pyruvate dehydrogenase (NADP(+))~SPTR: Pyruvate-flavodoxin oxidoreductase%3B~TIGRFAM: Pyruvate-flavodoxin oxidoreductase~PFAM: domain%3B Domain of unknown function%3B Pyruvate ferredoxin/flavodoxin oxidoreductase%3B Thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain~TIGRFAM: pyruvate:ferredoxin (flavodoxin) oxidoreductase%2C homodimeric gene gene170 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0165 Sgly_0166 Sgly_0166 Sgly_0166 175864 176061 - hypothetical protein KEGG: dae:Dtox_0087 hypothetical protein~SPTR: Putative uncharacterized protein gene gene171 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0166 Sgly_0167 Sgly_0167 Sgly_0167 176231 176542 + Sigma-G inhibitor%2C Gin InterPro IPR019700~KEGG: slp:Slip_0044 sigma-G inhibitor%2C Gin~PFAM: Sigma-G inhibitor%2C Gin~SPTR: Sigma-G inhibitor%2C Gin%3B~PFAM: Inhibitor of sigma-G Gin gene gene172 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0167 Sgly_0168 Sgly_0168 Sgly_0168 176597 178048 + Arginine decarboxylase COGs: COG1982 Arginine/lysine/ornithine decarboxylase~InterPro IPR000310: IPR008286~KEGG: dsy:DSY0121 hypothetical protein~PFAM: Orn/Lys/Arg decarboxylase%2C major domain%3B Orn/Lys/Arg decarboxylase%2C C-terminal~PRIAM: Arginine decarboxylase~SPTR: Putative uncharacterized protein%3B~PFAM: Orn/Lys/Arg decarboxylase%2C C-terminal domain%3B Orn/Lys/Arg decarboxylase%2C major domain gene gene173 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0168 Sgly_0169 Sgly_0169 Sgly_0169 178061 178942 + DNA-directed DNA polymerase COGs: COG2812 DNA polymerase III gamma/tau subunits~KEGG: dhd:Dhaf_0061 DNA-directed DNA polymerase~SPTR: DNA-directed DNA polymerase%3B~manually curated gene gene174 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0169 Sgly_0170 Sgly_0170 Sgly_0170 178935 179681 + PSP1 domain protein COGs: COG1774 Uncharacterized homolog of PSP1~InterPro IPR007557~KEGG: dhd:Dhaf_0062 PSP1 domain protein~PFAM: PSP1%2C C-terminal~SPTR: Putative uncharacterized protein%3B~PFAM: PSP1 C-terminal conserved region gene gene175 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0170 Sgly_0171 Sgly_0171 Sgly_0171 179684 179992 + protein of unknown function DUF972 COGs: COG4467 conserved hypothetical protein~InterPro IPR010377~KEGG: dsy:DSY0124 hypothetical protein~PFAM: Protein of unknown function DUF972~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF972) gene gene176 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0171 Sgly_0172 Sgly_0172 Sgly_0172 180010 180879 + Ribosomal RNA small subunit methyltransferase I COGs: COG0313 methyltransferase~HAMAP: Ribosomal RNA small subunit methyltransferase I~InterPro IPR000878: IPR008189~KEGG: dhd:Dhaf_0064 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase~PFAM: Tetrapyrrole methylase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Uncharacterised protein family UPF0011~PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases~TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase%2C YraL family gene gene177 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0172 Sgly_0173 Sgly_0173 Sgly_0173 180923 181180 - transcriptional regulator%2C AbrB family COGs: COG2002 Regulators of stationary/sporulation gene expression~InterPro IPR007159: IPR006339~KEGG: dhd:Dhaf_0065 transcriptional regulator%2C AbrB family~PFAM: Transcription regulator AbrB/SpoV%2C predicted~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Transcription regulator AbrB~PFAM: SpoVT / AbrB like domain~TIGRFAM: looped-hinge helix DNA binding domain%2C AbrB family gene gene178 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0173 Sgly_0174 Sgly_0174 Sgly_0174 181399 183366 + methionyl-tRNA synthetase COGs: COG0143 Methionyl-tRNA synthetase~HAMAP: Methionyl-tRNA synthetase~InterPro IPR015413: IPR002547: IPR002304: IPR004495~KEGG: dhd:Dhaf_0067 methionyl-tRNA synthetase~PFAM: Aminoacyl-tRNA synthetase%2C class I (M)%3B tRNA-binding domain~PRIAM: Methionine--tRNA ligase~SPTR: Methionyl-tRNA synthetase%3B~TIGRFAM: Methionyl-tRNA synthetase%2C class Ia%3B Methionyl-tRNA synthetase%2C class Ia%2C beta subunit%2C C-terminal~PFAM: tRNA synthetases class I (M)%3B Putative tRNA binding domain~TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain%3B methionyl-tRNA synthetase gene gene179 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0174 Sgly_0175 Sgly_0175 Sgly_0175 183363 184127 + hydrolase%2C TatD family COGs: COG0084 Mg-dependent DNase~InterPro IPR001130: IPR015991~KEGG: dhd:Dhaf_0068 hydrolase%2C TatD family~PFAM: Deoxyribonuclease%2C TatD-related~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Deoxyribonuclease%2C TatD Mg-dependent%2C prokaryote~PFAM: TatD related DNase~TIGRFAM: hydrolase%2C TatD family gene gene180 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0175 Sgly_0176 Sgly_0176 Sgly_0176 184163 184879 - protein of unknown function DUF45 COGs: COG1451 metal-dependent hydrolase~InterPro IPR002725~KEGG: dhd:Dhaf_0373 protein of unknown function DUF45~PFAM: Protein of unknown function DUF45~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function DUF45 gene gene181 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0176 Sgly_0177 Sgly_0177 Sgly_0177 184952 185956 - peptidase S26B%2C signal peptidase InterPro IPR019759: IPR001733~KEGG: tsi:TSIB_1249 signal peptidase I~PFAM: Peptidase S24/S26A/S26B%2C conserved region~SPTR: Signal peptidase I%3B~TIGRFAM: Peptidase S26B%2C eukaryotic signal peptidase~PFAM: Peptidase S24-like~TIGRFAM: signal peptidase I%2C archaeal type gene gene182 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0177 Sgly_0178 Sgly_0178 Sgly_0178 186222 186977 - hypothetical protein KEGG: aoe:Clos_0641 hypothetical protein~SPTR: Putative uncharacterized protein gene gene183 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0178 Sgly_0179 Sgly_0179 Sgly_0179 187038 188348 - Radical SAM domain protein COGs: COG4277 DNA-binding protein with the Helix-hairpin-helix motif~InterPro IPR007197~KEGG: hmo:HM1_1854 radical sam domain protein%2C putative~PFAM: Radical SAM~SPTR: Radical sam domain protein%2C putative gene gene184 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0179 Sgly_0180 Sgly_0180 Sgly_0180 188345 188929 - Indolepyruvate ferredoxin oxidoreductase COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit~InterPro IPR019752~KEGG: cth:Cthe_0614 indolepyruvate oxidoreductase subunit beta~PFAM: Pyruvate/ketoisovalerate oxidoreductase%2C catalytic domain~PRIAM: Indolepyruvate ferredoxin oxidoreductase~SPTR: Putative uncharacterized protein%3B~PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase~TIGRFAM: indolepyruvate ferredoxin oxidoreductase%2C beta subunit gene gene185 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0180 Sgly_0181 Sgly_0181 Sgly_0181 188929 190653 - indolepyruvate ferredoxin oxidoreductase%2C alpha subunit COGs: COG4231 Indolepyruvate ferredoxin oxidoreductase alpha and beta subunits~InterPro IPR002880: IPR011766: IPR017721~KEGG: cth:Cthe_0613 thiamine pyrophosphate enzyme-like TPP-binding~PFAM: Thiamine pyrophosphate enzyme%2C C-terminal TPP-binding%3B Pyruvate flavodoxin/ferredoxin oxidoreductase%2C N-terminal~PRIAM: Indolepyruvate ferredoxin oxidoreductase~SPTR: Thiamine pyrophosphate enzyme-like TPP-binding%3B~TIGRFAM: Indolepyruvate ferredoxin oxidoreductase%2C alpha subunit~PFAM: domain%3B Thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain~TIGRFAM: indolepyruvate ferredoxin oxidoreductase%2C alpha subunit gene gene186 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0181 Sgly_0182 Sgly_0182 Sgly_0182 190820 192115 - phenylacetate-CoA ligase COGs: COG1541 Coenzyme F390 synthetase~InterPro IPR000873~KEGG: hmo:HM1_1465 phenylacetate-coa ligase~PFAM: AMP-dependent synthetase/ligase~PRIAM: Phenylacetate--CoA ligase~SPTR: Phenylacetate-coa ligase%3B~PFAM: AMP-binding enzyme gene gene187 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0182 Sgly_0183 Sgly_0183 Sgly_0183 192356 192658 - prevent-host-death family protein InterPro IPR006442~KEGG: tpd:Teth39_1481 prevent-host-death family protein~SPTR: Prevent-host-death family protein%3B~TIGRFAM: Prevent-host-death protein~PFAM: Phd_YefM~TIGRFAM: prevent-host-death family protein gene gene188 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0183 Sgly_0184 Sgly_0184 Sgly_0184 192962 193528 + RNAse M5 COGs: COG1658 Small primase-like protein (Toprim domain)~InterPro IPR006154: IPR006171: IPR004466~KEGG: dhd:Dhaf_0073 primase/topoisomerase like protein~PFAM: Toprim domain~SMART: Toprim domain%2C subgroup~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Primase-related protein~PFAM: Toprim domain~TIGRFAM: ribonuclease M5 gene gene189 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0184 Sgly_0185 Sgly_0185 Sgly_0185 193521 194414 + dimethyladenosine transferase COGs: COG0030 Dimethyladenosine transferase (rRNA methylation)~HAMAP: Ribosomal RNA adenine dimethylase~InterPro IPR020598: IPR001737: IPR011530~KEGG: dhd:Dhaf_0074 dimethyladenosine transferase~PFAM: Ribosomal RNA adenine methylase transferase~SMART: Ribosomal RNA adenine methylase transferase%2C N-terminal~SPTR: Ribosomal RNA small subunit methyltransferase A%3B~TIGRFAM: Ribosomal RNA adenine dimethylase~PFAM: Ribosomal RNA adenine dimethylase~TIGRFAM: dimethyladenosine transferase gene gene190 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0185 Sgly_0186 Sgly_0186 Sgly_0186 194691 196460 + methyl-accepting chemotaxis sensory transducer with Cache sensor COGs: COG0840 Methyl-accepting chemotaxis protein~InterPro IPR003660: IPR004089: IPR013163~KEGG: dhd:Dhaf_0079 methyl-accepting chemotaxis sensory transducer with cache sensor~PFAM: Chemotaxis methyl-accepting receptor%2C signalling%3B HAMP linker domain%3B Cache%2C type 2~SMART: Chemotaxis methyl-accepting receptor%2C signalling%3B HAMP linker domain~SPTR: Putative uncharacterized protein%3B~PFAM: HAMP domain%3B Cache domain%3B Methyl-accepting chemotaxis protein (MCP) signaling domain gene gene191 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0186 Sgly_0187 Sgly_0187 Sgly_0187 196658 197485 + sporulation peptidase YabG InterPro IPR008764~KEGG: dhd:Dhaf_0082 sporulation peptidase YabG~PFAM: Peptidase U57%2C YabG~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Peptidase U57%2C YabG~PFAM: YabG peptidase U57~TIGRFAM: sporulation peptidase YabG gene gene192 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0187 Sgly_0188 Sgly_0188 Sgly_0188 197534 198337 + cyanophycinase COGs: COG4242 Cyanophycinase and related exopeptidase~InterPro IPR005320: IPR011811~KEGG: dhd:Dhaf_0084 cyanophycinase~PFAM: Peptidase S51%2C dipeptidase E~PRIAM: Cyanophycinase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Cyanophycinase~PFAM: Peptidase family S51~TIGRFAM: cyanophycinase gene gene193 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0188 Sgly_0189 Sgly_0189 Sgly_0189 198436 201063 + cyanophycin synthetase COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase~InterPro IPR003135: IPR013651: IPR013221: IPR004101: IPR 011810~KEGG: dsy:DSY0146 cyanophycin synthetase~PFAM: Mur ligase%2C central%3B ATP-grasp fold%2C ATP-dependent carboxylate-amine ligase-type%3B ATP-grasp fold%2C RimK-type%3B Mur ligase%2C C-terminal~PRIAM: Cyanophycin synthase (L-aspartate-adding)~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Cyanophycin synthetase~PFAM: Mur ligase family%2C glutamate ligase domain%3B Phosphoribosylglycinamide synthetase%2C ATP-grasp (A) domain%3B Mur ligase middle domain~TIGRFAM: cyanophycin synthetase%3B glutamate--cysteine ligase/gamma-glutamylcysteine synthetase%2C Streptococcus agalactiae type gene gene194 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0189 Sgly_0190 Sgly_0190 Sgly_0190 201145 202053 + 4-diphosphocytidyl-2-C-methyl-D-erythritolkinase COGs: COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase~HAMAP: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase~InterPro IPR006204: IPR013750: IPR004424~KEGG: dhd:Dhaf_0087 4-diphosphocytidyl-2C-methyl-D-erythritol kinase~PFAM: GHMP kinase%3B GHMP kinase%2C C-terminal~PRIAM: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase~SPTR: 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase%3B~TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase~PFAM: GHMP kinases C terminal%3B GHMP kinases N terminal domain~TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase gene gene195 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0190 Sgly_0191 Sgly_0191 Sgly_0191 202128 202835 + transcriptional regulator%2C GntR family COGs: COG1802 Transcriptional regulators~InterPro IPR000524: IPR011711~KEGG: dhd:Dhaf_0088 transcriptional regulator%2C GntR family~PFAM: GntR%2C C-terminal%3B HTH transcriptional regulator%2C GntR~SMART: HTH transcriptional regulator%2C GntR~SPTR: Putative uncharacterized protein%3B~PFAM: Bacterial regulatory proteins%2C gntR family%3B FCD domain gene gene196 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0191 Sgly_0192 Sgly_0192 Sgly_0192 202866 203681 + purine operon repressor%2C PurR COGs: COG0503 Adenine/guanine phosphoribosyltransferase and related PRPP-binding protein~InterPro IPR015265: IPR000836: IPR010078~KEGG: dhd:Dhaf_0089 pur operon repressor~PFAM: Bacterial purine repressor%2C N-terminal%3B Phosphoribosyltransferase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Pur operon repressor~PFAM: Phosphoribosyl transferase domain%3B Bacterial purine repressor%2C N-terminal~TIGRFAM: pur operon repressor%2C Bacillus subtilis type%3B xanthine phosphoribosyltransferase gene gene197 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0192 Sgly_0193 Sgly_0193 Sgly_0193 203850 204107 + septation protein spoVG COGs: COG2088 Uncharacterized protein involved in the regulation of septum location~HAMAP: septation protein spoVG~InterPro IPR007170~KEGG: dhd:Dhaf_0090 SpoVG family protein~PFAM: Sporulation stage V%2C protein G~SPTR: Putative uncharacterized protein%3B~PFAM: SpoVG gene gene198 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0193 Sgly_0194 Sgly_0194 Sgly_0194 204288 205649 + glucosamine-1-phosphate N-acetyltransferase%3B UDP-N-acetylglucosamine pyrophosphorylase COGs: COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains)~HAMAP: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase~InterPro IPR001228: IPR001451: IPR005882~KEGG: dhd:Dhaf_0091 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase~PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase%3B Bacterial transferase hexapeptide repeat~PRIAM: Glucosamine-1-phosphate N-acetyltransferase~SPTR: Bifunctional protein glmU%3B~TIGRFAM: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase~PFAM: Nucleotidyl transferase~TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase gene gene199 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0194 Sgly_0195 Sgly_0195 Sgly_0195 205665 206606 + ribose-phosphate pyrophosphokinase COGs: COG0462 Phosphoribosylpyrophosphate synthetase~InterPro IPR000836: IPR005946~KEGG: dhd:Dhaf_0092 ribose-phosphate pyrophosphokinase~PFAM: Phosphoribosyltransferase~PRIAM: Ribose-phosphate diphosphokinase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Phosphoribosyl pyrophosphokinase~PFAM: Phosphoribosyl transferase domain~TIGRFAM: ribose-phosphate pyrophosphokinase gene gene200 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0195 Sgly_0196 Sgly_0196 Sgly_0196 206670 207470 - PRC-barrel domain protein COGs: COG3881 conserved hypothetical protein~InterPro IPR007903~KEGG: dhd:Dhaf_0118 PRC-barrel domain protein~PFAM: PRC-barrel~SPTR: Putative uncharacterized protein%3B~PFAM: PRC-barrel domain gene gene201 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0196 Sgly_0197 Sgly_0197 Sgly_0197 207570 208127 + peptidyl-tRNA hydrolase COGs: COG0193 Peptidyl-tRNA hydrolase~HAMAP: Peptidyl-tRNA hydrolase~InterPro IPR001328~KEGG: dhd:Dhaf_0119 peptidyl-tRNA hydrolase~PFAM: Peptidyl-tRNA hydrolase~PRIAM: Aminoacyl-tRNA hydrolase~SPTR: Peptidyl-tRNA hydrolase%3B~TIGRFAM: Peptidyl-tRNA hydrolase~PFAM: Peptidyl-tRNA hydrolase~TIGRFAM: peptidyl-tRNA hydrolase gene gene202 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0197 Sgly_0198 Sgly_0198 Sgly_0198 208272 208448 + hypothetical protein KEGG: dhd:Dhaf_0130 hypothetical protein~SPTR: Putative uncharacterized protein gene gene203 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0198 Sgly_0199 Sgly_0199 Sgly_0199 208515 212063 + transcription-repair coupling factor COGs: COG1197 Transcription-repair coupling factor (superfamily II helicase)~InterPro IPR014001: IPR001650: IPR003711: IPR011545: IPR 005118: IPR004576~KEGG: dsy:DSY0189 hypothetical protein~PFAM: Transcription factor CarD%3B DNA/RNA helicase%2C DEAD/DEAH box type%2C N-terminal%3B DNA/RNA helicase%2C C-terminal%3B Transcription-repair-coupling factor~SMART: DEAD-like helicase%2C N-terminal%3B DNA/RNA helicase%2C C-terminal~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Transcription-repair coupling factor~PFAM: Helicase conserved C-terminal domain%3B TRCF domain%3B CarD-like/TRCF domain%3B DEAD/DEAH box helicase~TIGRFAM: transcription-repair coupling factor (mfd) gene gene204 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0199 Sgly_0200 Sgly_0200 Sgly_0200 212104 213039 + PpiC-type peptidyl-prolyl cis-trans isomerase COGs: COG0760 Parvulin-like peptidyl-prolyl isomerase~InterPro IPR000297~KEGG: dhd:Dhaf_0132 PpiC-type peptidyl-prolyl cis-trans isomerase~PFAM: Peptidyl-prolyl cis-trans isomerase%2C PpiC-type~SPTR: Putative uncharacterized protein%3B~PFAM: PPIC-type PPIASE domain gene gene205 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0200 Sgly_0201 Sgly_0201 Sgly_0201 213284 213832 + transcriptional regulator%2C AbrB family InterPro IPR007159: IPR003018: IPR014213: IPR006339~KEGG: dhd:Dhaf_0133 transcriptional regulator%2C AbrB family~PFAM: Transcription regulator AbrB/SpoV%2C predicted%3B GAF~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Sporulation stage V%2C protein T%3B Transcription regulator AbrB~PFAM: SpoVT / AbrB like domain~TIGRFAM: looped-hinge helix DNA binding domain%2C AbrB family%3B stage V sporulation protein T gene gene206 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0201 Sgly_0202 Sgly_0202 Sgly_0202 213921 215024 + MazG family protein COGs: COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain~InterPro IPR004518: IPR011551~KEGG: tjr:TherJR_0182 MazG family protein~PFAM: NTP pyrophosphohydrolase MazG%2C putative catalytic core~SPTR: MazG family protein%3B~TIGRFAM: NTP pyrophosphohydrolase MazG%2C bacterial~PFAM: MazG nucleotide pyrophosphohydrolase domain~TIGRFAM: MazG family protein gene gene207 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0202 Sgly_0203 Sgly_0203 Sgly_0203 215130 215402 + bacterial nucleoid protein Hbs COGs: COG0776 Bacterial nucleoid DNA-binding protein~InterPro IPR000119~KEGG: dhd:Dhaf_0135 histone family protein DNA-binding protein~PFAM: Histone-like bacterial DNA-binding protein~SMART: Histone-like bacterial DNA-binding protein~SPTR: Putative uncharacterized protein%3B~PFAM: Bacterial DNA-binding protein gene gene208 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0203 Sgly_0204 Sgly_0204 Sgly_0204 215486 215761 + RNA-binding S4 domain protein COGs: COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)~InterPro IPR002942~KEGG: dhd:Dhaf_0136 RNA-binding S4 domain protein~PFAM: RNA-binding S4~SMART: RNA-binding S4~SPTR: Putative uncharacterized protein%3B~PFAM: S4 domain gene gene209 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0204 Sgly_0205 Sgly_0205 Sgly_0205 215936 216217 + sporulation protein YabP InterPro IPR012504~KEGG: dhd:Dhaf_0138 sporulation protein YabP~PFAM: Sporulation protein YabP~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Sporulation protein YabP~PFAM: YabP family~TIGRFAM: sporulation protein YabP gene gene210 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0205 Sgly_0206 Sgly_0206 Sgly_0206 216274 216729 + Spore cortex biosynthesis protein%2C YabQ InterPro IPR019074~KEGG: dsy:DSY0196 hypothetical protein~PFAM: Spore cortex biosynthesis protein%2C YabQ-like~SPTR: Putative uncharacterized protein%3B~PFAM: Spore cortex protein YabQ (Spore_YabQ)~TIGRFAM: spore cortex biosynthesis protein YabQ gene gene211 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0206 Sgly_0207 Sgly_0207 Sgly_0207 216887 217156 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily KEGG: dhd:Dhaf_0140 RNA polymerase%2C sigma-24 subunit%2C ECF subfamily~SPTR: RNA polymerase%2C sigma-24 subunit%2C ECF subfamily%3B~PFAM: Sigma-70%2C region 4 gene gene212 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0207 Sgly_0208 Sgly_0208 Sgly_0208 217119 217454 + Septum formation initiator InterPro IPR007060~KEGG: dhd:Dhaf_0141 septum formation initiator~PFAM: Septum formation initiator~SPTR: Putative uncharacterized protein%3B~PFAM: Septum formation initiator gene gene213 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0208 Sgly_0209 Sgly_0209 Sgly_0209 217705 219831 + protein serine/threonine phosphatase COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit~InterPro IPR001932: IPR010822~KEGG: dsy:DSY0199 hypothetical protein~PFAM: Sporulation stage II%2C protein E C-terminal~PRIAM: Phosphoprotein phosphatase~SMART: Protein phosphatase 2C-related~SPTR: Putative uncharacterized protein%3B~PFAM: Stage II sporulation protein E (SpoIIE)~TIGRFAM: stage II sporulation protein E gene gene214 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0209 Sgly_0210 Sgly_0210 Sgly_0210 219870 221297 + tRNA(Ile)-lysidine synthase COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control~HAMAP: tRNA(Ile)-lysidine synthase~InterPro IPR011063: IPR012795: IPR012796~KEGG: dsy:DSY0200 hypothetical protein~PFAM: PP-loop~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Lysidine-tRNA(Ile) synthetase%2C N-terminal%3B Lysidine-tRNA(Ile) synthetase%2C C-terminal~PFAM: TilS substrate C-terminal domain%3B PP-loop family~TIGRFAM: tRNA(Ile)-lysidine synthetase%2C C-terminal domain%3B tRNA(Ile)-lysidine synthetase%2C N-terminal domain gene gene215 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0210 Sgly_0211 Sgly_0211 Sgly_0211 221402 223339 + membrane protease FtsH catalytic subunit COGs: COG0465 ATP-dependent Zn protease~InterPro IPR003593: IPR003959: IPR000642: IPR005936~KEGG: dhd:Dhaf_0145 ATP-dependent metalloprotease FtsH~PFAM: Peptidase M41%3B ATPase%2C AAA-type%2C core~PRIAM: Microtubule-severing ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Peptidase M41%2C FtsH~PFAM: Peptidase family M41%3B ATPase family associated with various cellular activities (AAA)~TIGRFAM: ATP-dependent metalloprotease FtsH gene gene216 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0211 Sgly_0212 Sgly_0212 Sgly_0212 223371 223823 + nucleoside diphosphate kinase COGs: COG0105 Nucleoside diphosphate kinase~HAMAP: Nucleoside diphosphate kinase%2C core~InterPro IPR001564~KEGG: dhd:Dhaf_0146 nucleoside diphosphate kinase~PFAM: Nucleoside diphosphate kinase%2C core~PRIAM: Nucleoside-diphosphate kinase~SMART: Nucleoside diphosphate kinase%2C core~SPTR: Nucleoside diphosphate kinase%3B~PFAM: Nucleoside diphosphate kinase gene gene217 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0212 Sgly_0213 Sgly_0213 Sgly_0213 223875 224567 + protein of unknown function DUF881 COGs: COG3879 conserved hypothetical protein~InterPro IPR010273~KEGG: dhd:Dhaf_0147 protein of unknown function DUF881~PFAM: Protein of unknown function DUF881%2C bacterial~SPTR: Putative uncharacterized protein%3B~PFAM: Bacterial protein of unknown function (DUF881) gene gene218 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0213 Sgly_0214 Sgly_0214 Sgly_0214 224567 225274 + protein of unknown function DUF881 COGs: COG3879 conserved hypothetical protein~InterPro IPR010273~KEGG: dhd:Dhaf_0148 protein of unknown function DUF881~PFAM: Protein of unknown function DUF881%2C bacterial~SPTR: Putative uncharacterized protein%3B~PFAM: Bacterial protein of unknown function (DUF881) gene gene219 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0214 Sgly_0215 Sgly_0215 Sgly_0215 225396 227066 + Formate-tetrahydrofolate ligase COGs: COG2759 Formyltetrahydrofolate synthetase~HAMAP: Formate-tetrahydrofolate ligase%2C FTHFS~InterPro IPR000559~KEGG: dhd:Dhaf_0149 formate--tetrahydrofolate ligase~PFAM: Formate-tetrahydrofolate ligase%2C FTHFS~PRIAM: Formate--tetrahydrofolate ligase~SPTR: Formate--tetrahydrofolate ligase%3B~PFAM: Formate--tetrahydrofolate ligase gene gene220 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0215 Sgly_0216 Sgly_0216 Sgly_0216 227167 228408 + dihydropteroate synthase COGs: COG0294 Dihydropteroate synthase~InterPro IPR000489: IPR006157: IPR006390: IPR006156~KEGG: dhd:Dhaf_0151 dihydropteroate synthase~PFAM: Dihydropteroate synthase%2C DHPS%3B Dihydroneopterin aldolase~PRIAM: Dihydropteroate synthase.%2C Dihydroneopterin aldolase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Dihydropteroate synthase%3B Dihydroneopterin aldolase%3B Dihydroneopterin aldolase subgroup~PFAM: Pterin binding enzyme%3B Dihydroneopterin aldolase~TIGRFAM: dihydroneopterin aldolase%3B dihydropteroate synthase%3B FolB domain gene gene221 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0216 Sgly_0217 Sgly_0217 Sgly_0217 228405 228875 + 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase COGs: COG0801 7 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase~InterPro IPR000550~KEGG: dhd:Dhaf_0153 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase~PFAM: 7%2C8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase%2C HPPK~PRIAM:2-amino-4-hydroxy-6-hydroxymethyldihydropteri dinediphosphokinase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: 7%2C8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase%2C HPPK~PFAM: 7%2C8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)~TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase gene gene222 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0217 Sgly_0218 Sgly_0218 Sgly_0218 229135 230058 + Domain of unknown function DUF2520-containing protein COGs: COG5495 conserved hypothetical protein~InterPro IPR019665: IPR018931~KEGG: dhd:Dhaf_0154 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein~PFAM: Domain of unknown function DUF2520%3B Putative oxidoreductase/dehydrogenase%2C Rossmann-like domain~SPTR: Putative uncharacterized protein%3B~PFAM: Domain of unknown function (DUF2520)%3B Rossmann-like domain gene gene223 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0218 Sgly_0219 Sgly_0219 Sgly_0219 230055 230918 + pantothenate synthetase COGs: COG0414 Panthothenate synthetase~HAMAP: Pantoate-beta-alanine ligase~InterPro IPR003721~KEGG: dhd:Dhaf_0155 pantoate--beta-alanine ligase~PFAM: Pantoate-beta-alanine ligase~SPTR: Pantothenate synthetase%3B~TIGRFAM: Pantoate-beta-alanine ligase~PFAM: Pantoate-beta-alanine ligase~TIGRFAM: pantoate--beta-alanine ligase gene gene224 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0219 Sgly_0220 Sgly_0220 Sgly_0220 230924 231307 + L-aspartate 1-decarboxylase COGs: COG0853 Aspartate 1-decarboxylase~HAMAP: Aspartate decarboxylase~InterPro IPR003190~KEGG: dhd:Dhaf_0156 aspartate alpha-decarboxylase~PFAM: Aspartate decarboxylase~PRIAM: Aspartate 1-decarboxylase~SPTR: Aspartate 1-decarboxylase%3B~TIGRFAM: Aspartate decarboxylase~PFAM: Aspartate decarboxylase~TIGRFAM: L-aspartate-alpha-decarboxylase gene gene225 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0220 Sgly_0221 Sgly_0221 Sgly_0221 231372 232301 + quinolinate synthetase A COGs: COG0379 Quinolinate synthase~HAMAP: Quinolinate synthase A~InterPro IPR003473~KEGG: pth:PTH_0229 quinolinate synthetase~PFAM: Quinolinate synthetase A~PRIAM: Quinolinate synthase~SPTR: Quinolinate synthase%3B~TIGRFAM: Quinolinate synthetase A~PFAM: Quinolinate synthetase A protein~TIGRFAM: quinolinate synthetase complex%2C A subunit gene gene226 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0221 Sgly_0222 Sgly_0222 Sgly_0222 232323 233942 + L-aspartate oxidase COGs: COG0029 Aspartate oxidase~InterPro IPR003953: IPR004112: IPR005288~KEGG: dhd:Dhaf_0157 L-aspartate oxidase~PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein%2C N-terminal%3B Fumarate reductase/succinate dehydrogenase flavoprotein%2C C-terminal~PRIAM: L-aspartate oxidase~SPTR: L-aspartate oxidase%3B~TIGRFAM: L-aspartate oxidase~PFAM: domain%3B FAD binding domain~TIGRFAM: L-aspartate oxidase gene gene227 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0222 Sgly_0223 Sgly_0223 Sgly_0223 233929 234798 + nicotinate-nucleotide pyrophosphorylase (carboxylating) COGs: COG0157 Nicotinate-nucleotide pyrophosphorylase~InterPro IPR002638: IPR004393~KEGG: dhd:Dhaf_0158 nicotinate-nucleotide pyrophosphorylase~PFAM: Quinolinate phosphoribosyl transferase~PRIAM: Nicotinate-nucleotide diphosphorylase (carboxylating)~SPTR: Nicotinate nucleotide pyrophosphorylase%3B~TIGRFAM: Nicotinate-nucleotide pyrophosphorylase~PFAM: Quinolinate phosphoribosyl transferase%2C C-terminal domain%3B Quinolinate phosphoribosyl transferase%2C N-terminal domain~TIGRFAM: nicotinate-nucleotide pyrophosphorylase gene gene228 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0223 Sgly_0224 Sgly_0224 Sgly_0224 234795 235562 + pantothenate kinase COGs: COG1521 Putative transcriptional regulator protein~HAMAP: Type III pantothenate kinase~InterPro IPR004619~KEGG: dhd:Dhaf_0160 pantothenate kinase~PFAM: Bordetella pertussis Bvg accessory factor~SPTR: Type III pantothenate kinase%3B~TIGRFAM: Bordetella pertussis Bvg accessory factor~PFAM: Bordetella pertussis Bvg accessory factor family~TIGRFAM: pantothenate kinase%2C type III gene gene229 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0224 Sgly_0225 Sgly_0225 Sgly_0225 235634 236599 + tRNA-U20-dihydrouridine synthase COGs: COG0042 tRNA-dihydrouridine synthase~InterPro IPR001269: IPR004652~KEGG: dhd:Dhaf_0161 TIM-barrel protein%2C nifR3 family~PFAM: tRNA-dihydrouridine synthase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: tRNA-dihydrouridine synthase%2C TIM-barrel%2C NifR3~manually curated~PFAM: Dihydrouridine synthase (Dus)~TIGRFAM: putative TIM-barrel protein%2C nifR3 family gene gene230 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0225 Sgly_0226 Sgly_0226 Sgly_0226 236787 237257 + transcription elongation factor GreA COGs: COG0782 Transcription elongation factor~HAMAP: Transcription elongation factor greA~InterPro IPR001437: IPR006359~KEGG: dhd:Dhaf_0162 transcription elongation factor GreA~PFAM: Transcription elongation factor%2C GreA/GreB domain%2C prokaryotic~SPTR: Transcription elongation factor%3B~TIGRFAM: Prokaryotic transcription elongation factor GreA~PFAM: domain%3B Transcription elongation factor%2C GreA/GreB%2C C-term~TIGRFAM: transcription elongation factor GreA gene gene231 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0226 Sgly_0227 Sgly_0227 Sgly_0227 237397 238872 + Lysyl-tRNA synthetase COGs: COG1190 Lysyl-tRNA synthetase (class II)~HAMAP: Lysyl-tRNA synthetase%2C class II~InterPro IPR004365: IPR004364: IPR002313~KEGG: dhd:Dhaf_0163 lysyl-tRNA synthetase~PFAM: Aminoacyl-tRNA synthetase%2C class II (D/K/N)%3B Nucleic acid binding%2C OB-fold%2C tRNA/helicase-type~PRIAM: Lysine--tRNA ligase~SPTR: Lysyl-tRNA synthetase%3B~TIGRFAM: Lysyl-tRNA synthetase%2C class II~PFAM: tRNA synthetases class II (D%2C K and N)%3B OB-fold nucleic acid binding domain~TIGRFAM: lysyl-tRNA synthetase%2C eukaryotic and non-spirochete bacterial gene gene232 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0227 Sgly_0228 Sgly_0228 Sgly_0228 244546 244956 - hypothetical protein KEGG: dhd:Dhaf_2879 hypothetical protein~SPTR: Putative uncharacterized protein gene gene237 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0228 Sgly_0229 Sgly_0229 Sgly_0229 245169 246278 + peptidase T-like protein COGs: COG2195 Di- and tripeptidase~InterPro IPR002933: IPR011650: IPR010162~KEGG: aar:Acear_1716 peptidase T-like protein~PFAM: Peptidase M20%2C dimerisation%3B Peptidase M20~SPTR: Peptidase T-like protein%3B~TIGRFAM: Peptidase M20B%2C peptidase T~PFAM: Peptidase family M20/M25/M40%3B Peptidase dimerisation domain~TIGRFAM: amidohydrolase%3B peptidase T-like protein gene gene238 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0229 Sgly_0230 Sgly_0230 Sgly_0230 246411 246728 + hypothetical protein KEGG: dhd:Dhaf_0176 hypothetical protein~SPTR: Putative uncharacterized protein gene gene239 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0230 Sgly_0231 Sgly_0231 Sgly_0231 246906 248201 + glycosyl transferase family 2 COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis~InterPro IPR001173~KEGG: dhd:Dhaf_0177 glycosyl transferase family 2~PFAM: Glycosyl transferase%2C family 2~SPTR: Glycosyl transferase family 2%3B~PFAM: Glycosyl transferase family 2 gene gene240 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0231 Sgly_0232 Sgly_0232 Sgly_0232 248306 249415 - efflux transporter%2C RND family%2C MFP subunit COGs: COG1566 Multidrug resistance efflux pump~InterPro IPR006143~KEGG: mta:Moth_2322 secretion protein HlyD~PFAM: Secretion protein HlyD~SPTR: Secretion protein HlyD%3B~TIGRFAM: Secretion protein HlyD~PFAM: HlyD family secretion protein~TIGRFAM: RND family efflux transporter%2C MFP subunit gene gene241 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0232 Sgly_0233 Sgly_0233 Sgly_0233 249429 250130 - secretion protein HlyD family protein COGs: COG1566 Multidrug resistance efflux pump~InterPro IPR006143~KEGG: mta:Moth_2323 secretion protein HlyD~PFAM: Secretion protein HlyD~SPTR: Secretion protein HlyD%3B~PFAM: HlyD family secretion protein gene gene242 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0233 Sgly_0234 Sgly_0234 Sgly_0234 250165 251739 - drug resistance transporter%2C EmrB/QacA subfamily COGs: COG2814 Arabinose efflux permease~InterPro IPR011701: IPR004638~KEGG: ttm:Tthe_2574 drug resistance transporter%2C EmrB/QacA subfamily~PFAM: Major facilitator superfamily MFS-1~SPTR: Drug resistance transporter%2C EmrB/QacA subfamily%3B~TIGRFAM: Drug resistance transporter EmrB/QacA subfamily~PFAM: Major Facilitator Superfamily~TIGRFAM: drug resistance transporter%2C EmrB/QacA subfamily gene gene243 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0234 Sgly_0235 Sgly_0235 Sgly_0235 251708 252181 - regulatory protein MarR InterPro IPR000835~KEGG: tte:TTE2515 transcriptional regulator~PFAM: HTH transcriptional regulator%2C MarR~SMART: HTH transcriptional regulator%2C MarR~SPTR: Transcriptional regulator%3B~PFAM: MarR family gene gene244 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0235 Sgly_0236 Sgly_0236 Sgly_0236 253717 254838 + hypothetical protein KEGG: lsp:Bsph_4745 hypothetical protein~SPTR: Putative uncharacterized protein gene gene252 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0236 Sgly_0237 Sgly_0237 Sgly_0237 254943 255678 + pseudogene gene253 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0237 Sgly_0238 Sgly_0238 Sgly_0238 255651 256307 + pseudogene gene254 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0238 Sgly_0239 Sgly_0239 Sgly_0239 256595 256831 + hypothetical protein KEGG: amt:Amet_1381 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: YKOF-related Family gene gene255 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0239 Sgly_0240 Sgly_0240 Sgly_0240 257145 258788 - Hydroxylamine reductase COGs: COG1151 6Fe-6S prismane cluster-containing protein~HAMAP: Hybrid cluster protein~InterPro IPR004137: IPR010048~KEGG: dhd:Dhaf_4539 hydroxylamine reductase~PFAM: Prismane~SPTR: Hydroxylamine reductase%3B~TIGRFAM: Hybrid cluster protein~PFAM: Prismane/CO dehydrogenase family~TIGRFAM: hydroxylamine reductase gene gene256 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0240 Sgly_0241 Sgly_0241 Sgly_0241 258937 259614 + putative transcriptional regulator%2C Crp/Fnr family COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase~InterPro IPR000595~KEGG: cby:CLM_3318 cyclic nucleotide-binding protein~PFAM: Cyclic nucleotide-binding~SMART: Cyclic nucleotide-binding~SPTR: Cyclic nucleotide-binding protein%3B~PFAM: Cyclic nucleotide-binding domain gene gene257 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0241 Sgly_0242 Sgly_0242 Sgly_0242 259609 260676 - uncharacterized membrane protein COGs: COG3949 Uncharacterized membrane protein~KEGG: tjr:TherJR_2224 uncharacterized membrane protein~SPTR: Uncharacterized membrane protein%3B~PFAM: Spore germination protein gene gene258 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0242 Sgly_0243 Sgly_0243 Sgly_0243 260772 261407 + hypothetical protein KEGG: cpy:Cphy_3867 methyl-accepting chemotaxis sensory transducer~SPTR: Methyl-accepting chemotaxis sensory transducer gene gene259 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0243 Sgly_0244 Sgly_0244 Sgly_0244 261510 262322 + Sporulation protein YtxC InterPro IPR014199~KEGG: dhd:Dhaf_0184 sporulation protein YtxC~PFAM: Sporulation protein YtxC~SPTR: Putative uncharacterized protein%3B~PFAM: YtxC-like family~TIGRFAM: putative sporulation protein YtxC gene gene260 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0244 Sgly_0245 Sgly_0245 Sgly_0245 262690 264600 + Ser-tRNA(Thr) hydrolase%3B threonyl-tRNA synthetase COGs: COG0441 Threonyl-tRNA synthetase~InterPro IPR004095: IPR012947: IPR002314: IPR004154: IPR 002320~KEGG: dhd:Dhaf_0185 threonyl-tRNA synthetase~PFAM: Aminoacyl-tRNA synthetase%2C class II (G/ H/ P/ S)%2C conserved domain%3B Threonyl/alanyl tRNA synthetase%2C SAD%3B TGS%3B Anticodon-binding~SPTR: Threonyl-tRNA synthetase%3B~TIGRFAM: Threonyl-tRNA synthetase%2C class IIa~PFAM: Anticodon binding domain%3B Threonyl and Alanyl tRNA synthetase second additional domain%3B tRNA synthetase class II core domain (G%2C H%2C P%2C S and T)%3B TGS domain~TIGRFAM: threonyl-tRNA synthetase gene gene261 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0245 Sgly_0246 Sgly_0246 Sgly_0246 264703 265689 + metal dependent phosphohydrolase COGs: COG3481 HD-superfamily hydrolase~InterPro IPR003607: IPR004365: IPR006674~KEGG: cno:NT01CX_1237 HD domain-containing protein~PFAM: Metal-dependent phosphohydrolase%2C HD subdomain%3B Nucleic acid binding%2C OB-fold%2C tRNA/helicase-type~SMART: Metal-dependent phosphohydrolase%2C HD domain~SPTR: HD domain protein%3B~PFAM: HD domain%3B OB-fold nucleic acid binding domain gene gene262 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0246 Sgly_0247 Sgly_0247 Sgly_0247 265936 266457 + bacterial translation initiation factor 3 (bIF-3) COGs: COG0290 Translation initiation factor 3 (IF-3)~HAMAP: Translation initiation factor IF-3~InterPro IPR019814: IPR019815: IPR001288~KEGG: dhd:Dhaf_0215 translation initiation factor IF-3~PFAM: Translation initiation factor 3%2C N-terminal%3B Translation initiation factor 3%2C C-terminal~SPTR: Translation initiation factor IF-3%3B~TIGRFAM: Translation initiation factor 3~manually curated~PFAM: Translation initiation factor IF-3%2C C-terminal domain%3B Translation initiation factor IF-3%2C N-terminal domain~TIGRFAM: translation initiation factor IF-3 gene gene263 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0247 Sgly_0248 Sgly_0248 Sgly_0248 266479 266676 + LSU ribosomal protein L35P HAMAP: Ribosomal protein L35%2C non-mitochondrial~InterPro IPR021137: IPR001706~KEGG: dhd:Dhaf_0216 50S ribosomal protein L35~PFAM: Ribosomal protein L35~SPTR: 50S ribosomal protein L35%3B~TIGRFAM: Ribosomal protein L35%2C non-mitochondrial~PFAM: Ribosomal protein L35~TIGRFAM: ribosomal protein L35 gene gene264 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0248 Sgly_0249 Sgly_0249 Sgly_0249 266713 267096 + LSU ribosomal protein L20P COGs: COG0292 Ribosomal protein L20~HAMAP: Ribosomal protein L20~InterPro IPR005813~KEGG: mta:Moth_1756 50S ribosomal protein L20~PFAM: Ribosomal protein L20~SPTR: 50S ribosomal protein L20%3B~TIGRFAM: Ribosomal protein L20~PFAM: Ribosomal protein L20~TIGRFAM: ribosomal protein L20 gene gene265 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0249 Sgly_0250 Sgly_0250 Sgly_0250 267192 268013 + tRNA/rRNA methyltransferase (SpoU) COGs: COG0566 rRNA methylase~InterPro IPR013123: IPR001537~KEGG: dhd:Dhaf_0218 tRNA/rRNA methyltransferase (SpoU)~PFAM: tRNA/rRNA methyltransferase%2C SpoU%3B RNA 2-O ribose methyltransferase%2C substrate binding~SPTR: tRNA/rRNA methyltransferase (SpoU)%3B~PFAM: SpoU rRNA Methylase family%3B RNA 2'-O ribose methyltransferase substrate binding gene gene266 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0250 Sgly_0251 Sgly_0251 Sgly_0251 268084 268221 + hypothetical protein gene gene267 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0251 Sgly_0252 Sgly_0252 Sgly_0252 268434 269456 + phenylalanyl-tRNA synthetase%2C alpha subunit COGs: COG0016 Phenylalanyl-tRNA synthetase alpha subunit~HAMAP: Phenylalanyl-tRNA synthetase alpha chain~InterPro IPR004188: IPR002319: IPR004529~KEGG: dhd:Dhaf_0219 phenylalanyl-tRNA synthetase subunit alpha~PFAM: Phenylalanyl-tRNA synthetase alpha chain%3B Phenylalanyl-tRNA synthetase%2C class II%2C N-terminal~SPTR: Phenylalanyl-tRNA synthetase alpha chain%3B~TIGRFAM: Phenylalanyl-tRNA synthetase%2C class IIc%2C alpha subunit~PFAM: tRNA synthetases class II core domain (F)%3B Aminoacyl tRNA synthetase class II%2C N-terminal domain~TIGRFAM: phenylalanyl-tRNA synthetase%2C alpha subunit gene gene268 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0252 Sgly_0253 Sgly_0253 Sgly_0253 269492 271906 + phenylalanyl-tRNA synthetase beta subunit COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit~HAMAP: Phenylalanyl-tRNA synthetase%2C class IIc%2C beta subunit%2C bacterial~InterPro IPR002547: IPR005146: IPR005147: IPR005121: IPR 004532~KEGG: dsy:DSY0272 phenylalanyl-tRNA synthetase subunit beta~PFAM: B3/B4 tRNA-binding domain%3B tRNA-binding domain%3B tRNA synthetase%2C B5%3B Phenylalanyl-tRNA synthetase%2C beta subunit%2C ferrodoxin-fold anticodon-binding~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Phenylalanyl-tRNA synthetase%2C class IIc%2C beta subunit%2C bacterial~PFAM: tRNA synthetase B5 domain%3B Ferredoxin-fold anticodon binding domain%3B B3/4 domain%3B Putative tRNA binding domain~TIGRFAM: phenylalanyl-tRNA synthetase%2C beta subunit%2C non-spirochete bacterial gene gene269 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0253 Sgly_0254 Sgly_0254 Sgly_0254 271971 272231 + protein of unknown function DUF710 InterPro IPR007838~KEGG: dhd:Dhaf_0221 protein of unknown function DUF710~PFAM: Cell division protein ZapA-like~SPTR: Putative uncharacterized protein%3B~PFAM: Cell division protein ZapA gene gene270 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0254 Sgly_0255 Sgly_0255 Sgly_0255 272334 273200 - hypothetical protein COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold~KEGG: dsy:DSY0769 hypothetical protein~SPTR: Putative uncharacterized protein gene gene271 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0255 Sgly_0256 Sgly_0256 Sgly_0256 273325 275898 + peptidase U32 COGs: COG0826 Collagenase and related protease~InterPro IPR001539~KEGG: dhd:Dhaf_0229 peptidase U32~PFAM: Peptidase U32~SPTR: Putative uncharacterized protein%3B~PFAM: Collagenase%3B Peptidase family U32 gene gene272 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0256 Sgly_0257 Sgly_0257 Sgly_0257 275900 278281 + DNA mismatch repair protein%2C MutS family COGs: COG1193 Mismatch repair ATPase (MutS family)~HAMAP: DNA mismatch repair protein MutS%2C type 2~InterPro IPR007696: IPR000432: IPR002625: IPR005747~KEGG: dhd:Dhaf_0230 MutS2 family protein~PFAM: Smr protein/MutS2 C-terminal%3B DNA mismatch repair protein MutS%2C C-terminal~SMART: DNA mismatch repair protein MutS%2C C-terminal%3B DNA mismatch repair protein MutS%2C core%3B Smr protein/MutS2 C-terminal~SPTR: MutS2 protein%3B~TIGRFAM: DNA mismatch repair protein MutS%2C type 2~manually curated~PFAM: MutS domain V%3B Smr domain~TIGRFAM: MutS2 family protein gene gene273 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0257 Sgly_0258 Sgly_0258 Sgly_0258 278404 278637 - hypothetical protein KEGG: dhd:Dhaf_3957 hypothetical protein~SPTR: Uncharacterized Zn-finger protein gene gene274 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0258 Sgly_0259 Sgly_0259 Sgly_0259 278755 279360 - transcriptional regulator%2C TetR family COGs: COG1309 Transcriptional regulator~InterPro IPR001647~KEGG: dsy:DSY2813 hypothetical protein~PFAM: Transcription regulator%2C TetR-like%2C DNA-binding%2C bacterial/archaeal~SPTR: Putative uncharacterized protein%3B~PFAM: Bacterial regulatory proteins%2C tetR family gene gene275 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0259 Sgly_0260 Sgly_0260 Sgly_0260 279404 280654 - integral membrane sensor signal transduction histidine kinase COGs: COG0642 Signal transduction histidine kinase~InterPro IPR003661: IPR003594~KEGG: tjr:TherJR_2639 integral membrane sensor signal transduction histidine kinase~PFAM: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain~SMART: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain~SPTR: Integral membrane sensor signal transduction histidine kinase%3B~PFAM: Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain gene gene276 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0260 Sgly_0261 Sgly_0261 Sgly_0261 280657 281328 - two component transcriptional regulator%2C winged helix family COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR001789: IPR001867~KEGG: tjr:TherJR_2638 two component transcriptional regulator%2C winged helix family~PFAM: Signal transduction response regulator%2C receiver domain%3B Signal transduction response regulator%2C C-terminal~SMART: Signal transduction response regulator%2C receiver domain~SPTR: Two component transcriptional regulator%2C winged helix family%3B~PFAM: Response regulator receiver domain%3B Transcriptional regulatory protein%2C C terminal gene gene277 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0261 Sgly_0262 Sgly_0262 Sgly_0262 281478 284165 - penicillin-binding protein%2C 1A family COGs: COG0744 Membrane carboxypeptidase (penicillin-binding protein)~InterPro IPR001264: IPR001460: IPR011816~KEGG: dhd:Dhaf_0235 penicillin-binding protein%2C 1A family~PFAM: Glycosyl transferase%2C family 51%3B Penicillin-binding protein%2C transpeptidase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Penicillin-binding protein 1A~PFAM: Penicillin binding protein transpeptidase domain%3B Transglycosylase~TIGRFAM: penicillin-binding protein%2C 1A family gene gene278 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0262 Sgly_0263 Sgly_0263 Sgly_0263 284420 285661 + tyrosyl-tRNA synthetase COGs: COG0162 Tyrosyl-tRNA synthetase~HAMAP: Tyrosyl-tRNA synthetase~InterPro IPR002942: IPR002305: IPR002307~KEGG: tjr:TherJR_1862 tyrosyl-tRNA synthetase~PFAM: Aminoacyl-tRNA synthetase%2C class Ib%3B RNA-binding S4~SMART: RNA-binding S4~SPTR: Tyrosyl-tRNA synthetase%3B~TIGRFAM: Tyrosyl-tRNA synthetase%2C class Ib%2C bacterial/mitochondrial~PFAM: S4 domain%3B tRNA synthetases class I (W and Y)~TIGRFAM: tyrosyl-tRNA synthetase gene gene279 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0263 Sgly_0264 Sgly_0264 Sgly_0264 291580 292209 + L-fuculose-phosphate aldolase COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase~InterPro IPR001303~KEGG: mta:Moth_2271 class II aldolase/adducin-like~PFAM: Class II aldolase/adducin%2C N-terminal~PRIAM: L-fuculose-phosphate aldolase~SPTR: Class II aldolase/adducin-like%3B~PFAM: Class II Aldolase and Adducin N-terminal domain~TIGRFAM: L-ribulose-5-phosphate 4-epimerase gene gene285 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0264 Sgly_0265 Sgly_0265 Sgly_0265 292271 293026 + Endoribonuclease L-PSP COGs: COG0251 Putative translation initiation inhibitor yjgF family~InterPro IPR006175~KEGG: pan:PODANSg1735 hypothetical protein~PFAM: Endoribonuclease L-PSP~SPTR: Predicted CDS Pa_5_8950%3B~PFAM: Endoribonuclease L-PSP gene gene286 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0265 Sgly_0266 Sgly_0266 Sgly_0266 293138 294049 + cell envelope-related transcriptional attenuator COGs: COG1316 Transcriptional regulator~InterPro IPR004474~KEGG: tpd:Teth39_1552 cell envelope-related transcriptional attenuator~PFAM: Cell envelope-related transcriptional attenuator~SPTR: Cell envelope-related transcriptional attenuator%3B~TIGRFAM: Cell envelope-related transcriptional attenuator~PFAM: Cell envelope-related transcriptional attenuator domain~TIGRFAM: cell envelope-related function transcriptional attenuator common domain gene gene287 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0266 Sgly_0267 Sgly_0267 Sgly_0267 294117 294608 - hypothetical protein KEGG: dsy:DSY1696 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Coat F domain gene gene288 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0267 Sgly_0268 Sgly_0268 Sgly_0268 294787 295473 + Catalase COGs: COG3546 Mn-containing catalase~InterPro IPR007760~KEGG: chy:CHY_0786 cotJC protein~PFAM: Catalase%2C manganese~PRIAM: Catalase~SPTR: CotJC protein%3B~PFAM: Manganese containing catalase gene gene289 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0268 Sgly_0269 Sgly_0269 Sgly_0269 295689 296120 + hypothetical protein KEGG: rme:Rmet_4662 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1232) gene gene290 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0269 Sgly_0270 Sgly_0270 Sgly_0270 296107 297174 - Cephalosporin-C deacetylase COGs: COG3458 Acetyl esterase (deacetylase)~InterPro IPR008391~KEGG: dhd:Dhaf_0284 acetyl xylan esterase~PFAM: Acetyl xylan esterase~PRIAM: Cephalosporin-C deacetylase~SPTR: Acetyl xylan esterase%3B~PFAM: Acetyl xylan esterase (AXE1) gene gene291 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0270 Sgly_0271 Sgly_0271 Sgly_0271 297437 298348 + UDP-glucose pyrophosphorylase COGs: COG1210 UDP-glucose pyrophosphorylase~InterPro IPR005835: IPR005771~KEGG: nth:Nther_2537 UDP-glucose pyrophosphorylase~PFAM: Nucleotidyl transferase~PRIAM: UTP--glucose-1-phosphate uridylyltransferase~SPTR: UDP-glucose pyrophosphorylase%3B~TIGRFAM: UTP--glucose-1-phosphate uridylyltransferase%2C bacterial/archaeal type~PFAM: Nucleotidyl transferase~TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase gene gene292 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0271 Sgly_0272 Sgly_0272 Sgly_0272 298519 298935 + protein of unknown function DUF805 COGs: COG3152 membrane protein~InterPro IPR008523~KEGG: cte:CT1580 aminopeptidase C%2C putative~PFAM: Protein of unknown function DUF805~SPTR: Aminopeptidase C%2C putative%3B~PFAM: Protein of unknown function (DUF805) gene gene293 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0272 Sgly_0273 Sgly_0273 Sgly_0273 299024 300277 - efflux transporter%2C RND family%2C MFP subunit COGs: COG0845 Membrane-fusion protein~InterPro IPR006143~KEGG: ctc:CTC00484 membrane-associated protein~PFAM: Secretion protein HlyD~SPTR: Conserved membrane-associated protein%3B~TIGRFAM: Secretion protein HlyD~PFAM: HlyD family secretion protein~TIGRFAM: RND family efflux transporter%2C MFP subunit gene gene294 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0273 Sgly_0274 Sgly_0274 Sgly_0274 300323 302917 - protein of unknown function DUF214 InterPro IPR003838~KEGG: ccu:Ccur_03260 predicted membrane protein~PFAM: Protein of unknown function DUF214%2C permase predicted~SPTR: ABC-type transport system%2C involved in lipoprotein release%2C permease component%3B~PFAM: Predicted permease~TIGRFAM: X-X-X-Leu-X-X-Gly heptad repeats gene gene295 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0274 Sgly_0275 Sgly_0275 Sgly_0275 302939 303637 - Phosphonate-transporting ATPase COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: cbe:Cbei_0262 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Phosphonate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter%2C ATP-binding protein%3B~PFAM: ABC transporter gene gene296 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0275 Sgly_0276 Sgly_0276 Sgly_0276 303944 305125 - protein of unknown function DUF214 COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component~InterPro IPR003838~KEGG: msv:Mesil_3303 hypothetical protein~PFAM: Protein of unknown function DUF214%2C permase predicted~SPTR: Putative uncharacterized protein%3B~PFAM: Predicted permease gene gene297 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0276 Sgly_0277 Sgly_0277 Sgly_0277 305100 305801 - Phosphonate-transporting ATPase COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: psl:Psta_0475 ABC transporter related protein~PFAM: ABC transporter-like~PRIAM: Phosphonate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related-protein%3B~PFAM: ABC transporter gene gene298 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0277 Sgly_0278 Sgly_0278 Sgly_0278 305869 306657 - hypothetical protein KEGG: afn:Acfer_1879 hypothetical protein~SPTR: Putative uncharacterized protein gene gene299 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0278 Sgly_0279 Sgly_0279 Sgly_0279 306690 308534 - Alkaline phosphatase COGs: COG1785 Alkaline phosphatase~InterPro IPR001952~KEGG: afn:Acfer_1880 alkaline phosphatase~PFAM: Alkaline phosphatase~PRIAM: Alkaline phosphatase~SMART: Alkaline phosphatase~SPTR: Alkaline phosphatase%3B~PFAM: Alkaline phosphatase gene gene300 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0279 Sgly_0280 Sgly_0280 Sgly_0280 308894 309514 + transcriptional regulator%2C TetR family COGs: COG1309 Transcriptional regulator~InterPro IPR001647~KEGG: ols:Olsu_0226 transcriptional regulator%2C TetR family~PFAM: Transcription regulator%2C TetR-like%2C DNA-binding%2C bacterial/archaeal~SPTR: Transcriptional regulator%2C TetR family%3B~PFAM: Bacterial regulatory proteins%2C tetR family gene gene301 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0280 Sgly_0281 Sgly_0281 Sgly_0281 309553 309648 + hypothetical protein gene gene302 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0281 Sgly_0282 Sgly_0282 Sgly_0282 309719 311548 + Xenobiotic-transporting ATPase COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterPro IPR003593: IPR001140: IPR003439~KEGG: ckr:CKR_3298 hypothetical protein~PFAM: ABC transporter-like%3B ABC transporter%2C transmembrane domain~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC-type multidrug transport system%2C ATPase and permease components%3B~PFAM: ABC transporter transmembrane region%3B ABC transporter gene gene303 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0282 Sgly_0283 Sgly_0283 Sgly_0283 311548 313287 + Xenobiotic-transporting ATPase COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterPro IPR003593: IPR001140: IPR003439~KEGG: ckr:CKR_3299 hypothetical protein~PFAM: ABC transporter-like%3B ABC transporter%2C transmembrane domain~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC-type multidrug transport system%2C ATPase and permease components%3B~PFAM: ABC transporter transmembrane region%3B ABC transporter gene gene304 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0283 Sgly_0284 Sgly_0284 Sgly_0284 313320 313430 + hypothetical protein gene gene305 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0284 Sgly_0285 Sgly_0285 Sgly_0285 313615 315255 + cell wall binding repeat 2-containing protein COGs: COG2247 Putative cell wall-binding domain~InterPro IPR007253: IPR013378~KEGG: clj:CLJU_c05110 putative cell wall-binding protein~PFAM: Putative cell wall binding repeat 2%3B Listeria/Bacterioides repeat~SPTR: Bacterial Ig-like domain (Group 2)%3B~PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt)%3B YodA%3B Putative cell wall binding repeat 2~TIGRFAM: Listeria/Bacterioides repeat gene gene306 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0285 Sgly_0286 Sgly_0286 Sgly_0286 315603 315826 + pseudogene gene307 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0286 Sgly_0287 Sgly_0287 Sgly_0287 315907 316476 - hypothetical protein KEGG: dhd:Dhaf_2834 hypothetical protein~SPTR: Putative uncharacterized protein gene gene308 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0287 Sgly_0288 Sgly_0288 Sgly_0288 316604 316829 + pseudogene gene309 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0288 Sgly_0289 Sgly_0289 Sgly_0289 317161 319419 + protein of unknown function DUF255 COGs: COG1331 Highly conserved protein containing a thioredoxin domain~KEGG: dhd:Dhaf_3335 protein of unknown function DUF255~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function%2C DUF255 gene gene310 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0289 Sgly_0290 Sgly_0290 Sgly_0290 319431 320519 + hypothetical protein KEGG: cth:Cthe_1219 hypothetical protein~SPTR: Putative uncharacterized protein gene gene311 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0290 Sgly_0291 Sgly_0291 Sgly_0291 320535 321140 - NUDIX hydrolase COGs: COG1051 ADP-ribose pyrophosphatase~InterPro IPR000086~KEGG: dsy:DSY0429 hypothetical protein~PFAM: NUDIX hydrolase domain~SPTR: Putative uncharacterized protein%3B~PFAM: NUDIX domain gene gene312 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0291 Sgly_0292 Sgly_0292 Sgly_0292 321318 322133 + hypothetical protein KEGG: pfd:PFDG_04513 predicted protein~SPTR: RESA-like protein with DnaJ domain%2C putative gene gene313 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0292 Sgly_0293 Sgly_0293 Sgly_0293 322363 322836 + transcriptional regulator COGs: COG4463 Transcriptional repressor of class III stress genes~InterPro IPR008463~KEGG: dhd:Dhaf_0386 transcriptional repressor%2C CtsR~PFAM: Firmicute transcriptional repressor of class III stress genes~SPTR: Putative uncharacterized protein%3B~PFAM: Firmicute transcriptional repressor of class III stress genes (CtsR) gene gene314 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0293 Sgly_0294 Sgly_0294 Sgly_0294 322863 323390 + UvrB/UvrC protein COGs: COG3880 Uncharacterized protein with conserved CXXC pairs~InterPro IPR001943~KEGG: dhd:Dhaf_0387 UvrB/UvrC protein~PFAM: UvrB/UvrC protein~SPTR: Putative uncharacterized protein%3B~PFAM: UvrB/uvrC motif gene gene315 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0294 Sgly_0295 Sgly_0295 Sgly_0295 323380 324432 + ATP:guanido phosphotransferase COGs: COG3869 Arginine kinase~HAMAP: ATP:guanido phosphotransferase~InterPro IPR000749~KEGG: dsy:DSY0437 ATP:guanido phosphotransferase~PFAM: ATP:guanido phosphotransferase~SPTR: Putative uncharacterized protein%3B~PFAM: ATP:guanido phosphotransferase%2C C-terminal catalytic domain gene gene316 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0295 Sgly_0296 Sgly_0296 Sgly_0296 324482 327007 + ATPase AAA-2 domain protein COGs: COG0542 ATPase with chaperone activity ATP-binding subunit~InterPro IPR003593: IPR004176: IPR003959: IPR001943: IPR 013093: IPR019489~KEGG: dhd:Dhaf_0389 ATPase AAA-2 domain protein~PFAM: ATPase%2C AAA-2%3B ATPase%2C AAA-type%2C core%3B Clp%2C N-terminal%3B UvrB/UvrC protein%3B Clp ATPase%2C C-terminal~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: AAA domain (Cdc48 subfamily)%3B C-terminal%2C D2-small domain%2C of ClpB protein%3B Clp amino terminal domain%3B ATPase family associated with various cellular activities (AAA)%3B UvrB/uvrC motif gene gene317 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0296 Sgly_0297 Sgly_0297 Sgly_0297 327036 328382 + DNA repair protein RadA COGs: COG1066 ATP-dependent serine protease~InterPro IPR003593: IPR004504~KEGG: dhd:Dhaf_0390 DNA repair protein RadA~SMART: ATPase%2C AAA+ type%2C core~SPTR: DNA repair protein radA%3B~TIGRFAM: DNA repair protein RadA~PFAM: KaiC%3B Lon protease (S16) C-terminal proteolytic domain~TIGRFAM: DNA repair protein RadA gene gene318 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0297 Sgly_0298 Sgly_0298 Sgly_0298 328545 328937 - hypothetical protein KEGG: dhd:Dhaf_0391 hypothetical protein~SPTR: Putative uncharacterized protein gene gene319 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0298 Sgly_0299 Sgly_0299 Sgly_0299 329145 330320 + PilT protein domain protein COGs: COG4956 Integral membrane protein (PIN domain superfamily)~InterPro IPR006596: IPR002716: IPR002792~KEGG: dsy:DSY0442 hypothetical protein~PFAM: PilT protein%2C N-terminal%3B Deoxyribonuclease/rho motif-related TRAM~SMART: Nucleotide binding protein%2C PINc~SPTR: Putative uncharacterized protein%3B~PFAM: TRAM domain%3B PIN domain gene gene320 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0299 Sgly_0300 Sgly_0300 Sgly_0300 330307 331023 + 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase COGs: COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase~HAMAP: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase~InterPro IPR001228~KEGG: dhd:Dhaf_0394 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase~PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase~SPTR: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase%3B~TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase~PFAM: Uncharacterized protein family UPF0007~TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase gene gene321 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0300 Sgly_0301 Sgly_0301 Sgly_0301 331014 331490 + 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase COGs: COG0245 2C-methyl-D-erythritol 2 4-cyclodiphosphate synthase~HAMAP: 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase%2C core~InterPro IPR003526~KEGG: dhd:Dhaf_0395 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase~PFAM: 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase%2C core~SPTR: 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase%3B~TIGRFAM: 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase%2C core~PFAM: YgbB family~TIGRFAM: 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase gene gene322 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0301 Sgly_0302 Sgly_0302 Sgly_0302 331570 333030 + glutamyl-tRNA synthetase COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase~InterPro IPR020058: IPR004527~KEGG: dhd:Dhaf_0396 glutamyl-tRNA synthetase~PFAM: Glutamyl/glutaminyl-tRNA synthetase%2C class Ic%2C catalytic domain~PRIAM: Glutamate--tRNA ligase~SPTR: Glutamyl-tRNA synthetase%3B~TIGRFAM: Glutamyl-tRNA synthetase%2C class Ic%2C bacterial/mitochondrial~PFAM: tRNA synthetases class I (E and Q)%2C catalytic domain~TIGRFAM: glutamyl-tRNA synthetase%2C bacterial family gene gene323 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0302 Sgly_0303 Sgly_0303 Sgly_0303 333052 334482 + cysteinyl-tRNA synthetase COGs: COG0215 Cysteinyl-tRNA synthetase~InterPro IPR015803: IPR015273: IPR002308~KEGG: dhd:Dhaf_0398 cysteinyl-tRNA synthetase~PFAM: Cysteinyl-tRNA synthetase%2C class Ia%2C N-terminal%3B Cysteinyl-tRNA synthetase%2C class Ia%2C DALR~PRIAM: Cysteine--tRNA ligase~SPTR: Cysteinyl-tRNA synthetase%3B~TIGRFAM: Cysteinyl-tRNA synthetase%2C class Ia~PFAM: tRNA synthetases class I (C) catalytic domain%3B DALR domain~TIGRFAM: cysteinyl-tRNA synthetase gene gene324 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0303 Sgly_0304 Sgly_0304 Sgly_0304 334467 334895 + ribonuclease III COGs: COG1939 conserved hypothetical protein~InterPro IPR000999~KEGG: dsy:DSY0448 hypothetical protein~PFAM: Ribonuclease III~SPTR: Putative uncharacterized protein%3B~PFAM: RNase3 domain gene gene325 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0304 Sgly_0305 Sgly_0305 Sgly_0305 334949 335458 + dihydrofolate reductase COGs: COG0262 Dihydrofolate reductase~InterPro IPR001796~KEGG: cth:Cthe_1226 dihydrofolate reductase~PFAM: Dihydrofolate reductase domain~SPTR: Dihydrofolate reductase%3B~PFAM: Dihydrofolate reductase gene gene326 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0305 Sgly_0306 Sgly_0306 Sgly_0306 335451 336224 + RNA methyltransferase%2C TrmH family%2C group 3 COGs: COG0566 rRNA methylase~InterPro IPR013123: IPR001537: IPR004441~KEGG: dhd:Dhaf_0401 RNA methyltransferase%2C TrmH family%2C group 3~PFAM: tRNA/rRNA methyltransferase%2C SpoU%3B RNA 2-O ribose methyltransferase%2C substrate binding~SPTR: Putative uncharacterized protein%3B~TIGRFAM: RNA methyltransferase TrmH%2C group 3~PFAM: SpoU rRNA Methylase family%3B RNA 2'-O ribose methyltransferase substrate binding~TIGRFAM: rRNA methylase%2C putative%2C group 3 gene gene327 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0306 Sgly_0307 Sgly_0307 Sgly_0307 336221 336979 + RNA polymerase%2C sigma 30 subunit%2C SigH COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog~InterPro IPR007627: IPR013249: IPR014218: IPR014284~KEGG: dhd:Dhaf_0402 RNA polymerase factor sigma-70~PFAM: RNA polymerase sigma-70 region 2%3B RNA polymerase sigma factor 70%2C region 4 type 2~SPTR: RNA polymerase%2C sigma-24 subunit%2C ECF subfamily%3B~TIGRFAM: RNA polymerase sigma-H type%3B RNA polymerase sigma-70~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family%3B RNA polymerase sigma-H factor gene gene328 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0307 Sgly_0308 Sgly_0308 Sgly_0308 337353 338945 - Recombinase InterPro IPR006119: IPR011109~KEGG: thx:Thet_2227 recombinase~PFAM: Recombinase%3B Resolvase%2C N-terminal~SPTR: Resolvase domain protein%3B~PFAM: Recombinase%3B Resolvase%2C N terminal domain gene gene332 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0308 Sgly_0309 Sgly_0309 Sgly_0309 338958 340037 - Restriction endonuclease%2C type I%2C R subunit/Type III COGs: COG4748 conserved hypothetical protein~InterPro IPR007409~KEGG: chu:CHU_0499 hypothetical protein~PFAM: Restriction endonuclease%2C type I%2C EcoRI%2C R subunit/Type III%2C Res subunit%2C N-terminal~SPTR: Putative uncharacterized protein%3B~PFAM: Type I restriction enzyme R protein N terminus (HSDR_N) gene gene333 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0309 Sgly_0310 Sgly_0310 Sgly_0310 340064 340669 - phage repressor like transcriptional regulator%2C XRE family COGs: COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidase)~InterPro IPR001387: IPR019759~KEGG: pjd:Pjdr2_1579 transcriptional regulator%2C XRE family~PFAM: Peptidase S24/S26A/S26B%2C conserved region%3B Helix-turn-helix type 3~SMART: Helix-turn-helix type 3~SPTR: Transcriptional regulator%2C XRE family%3B~PFAM: Helix-turn-helix%3B Peptidase S24-like~TIGRFAM: SOS regulatory protein LexA gene gene334 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0310 Sgly_0311 Sgly_0311 Sgly_0311 340843 341061 + hypothetical protein KEGG: lba:Lebu_0403 hypothetical protein~SPTR: Predicted protein gene gene335 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0311 Sgly_0312 Sgly_0312 Sgly_0312 341096 341266 + hypothetical protein gene gene336 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0312 Sgly_0313 Sgly_0313 Sgly_0313 341254 341511 + hypothetical protein KEGG: pop:POPTR_1092635 hypothetical protein~SPTR: Predicted protein gene gene337 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0313 Sgly_0314 Sgly_0314 Sgly_0314 341794 342567 + type I restriction-modification system methyltransferase subunit-like protein KEGG: mno:Mnod_3582 type I restriction-modification system methyltransferase subunit-like protein~SPTR: Type I restriction-modification system methyltransferase subunit-like protein%3B~PFAM: Methyltransferase small domain gene gene338 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0314 Sgly_0315 Sgly_0315 Sgly_0315 342599 343576 + hypothetical protein KEGG: bvi:Bcep1808_1157 hypothetical protein~SPTR: Putative uncharacterized protein gene gene339 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0315 Sgly_0316 Sgly_0316 Sgly_0316 343560 344120 + cell wall hydrolase SleB COGs: COG3773 Cell wall hydrolyses involved in spore germination~InterPro IPR011105~KEGG: hor:Hore_03060 spore cortex-lytic enzyme SleB~PFAM: Cell wall hydrolase%2C SleB~SPTR: Spore cortex-lytic enzyme SleB%3B~PFAM: Cell Wall Hydrolase gene gene340 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0316 Sgly_0317 Sgly_0317 Sgly_0317 344250 344540 + pseudogene gene341 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0317 Sgly_0318 Sgly_0318 Sgly_0318 344572 345135 + hypothetical protein KEGG: mag:amb1515 hypothetical protein~SPTR: Putative uncharacterized protein gene gene342 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0318 Sgly_0319 Sgly_0319 Sgly_0319 345152 345427 + transcriptional regulator%2C AbrB family InterPro IPR007159: IPR006339~KEGG: adg:Adeg_2116 transcriptional regulator%2C AbrB family~PFAM: Transcription regulator AbrB/SpoV%2C predicted~SPTR: Transcriptional regulator%2C AbrB family%3B~TIGRFAM: Transcription regulator AbrB~PFAM: SpoVT / AbrB like domain~TIGRFAM: looped-hinge helix DNA binding domain%2C AbrB family gene gene343 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0319 Sgly_0320 Sgly_0320 Sgly_0320 345424 346716 + SMC domain protein InterPro IPR003395~KEGG: cce:Ccel_3310 SMC domain protein~PFAM: RecF/RecN/SMC protein%2C N-terminal~SPTR: SMC domain protein gene gene344 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0320 Sgly_0321 Sgly_0321 Sgly_0321 346716 347801 + phage protein KEGG: cce:Ccel_3309 phage protein~SPTR: Phage protein gene gene345 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0321 Sgly_0322 Sgly_0322 Sgly_0322 347827 348276 + phage protein KEGG: cce:Ccel_3308 phage protein~SPTR: Phage protein gene gene346 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0322 Sgly_0323 Sgly_0323 Sgly_0323 348279 349892 + type III restriction protein res subunit COGs: COG1061 DNA or RNA helicase of superfamily II~InterPro IPR006935: IPR001650: IPR014001~KEGG: cce:Ccel_3307 type III restriction protein res subunit~PFAM: Restriction endonuclease%2C type I%2C R subunit/Type III%2C Res subunit%3B DNA/RNA helicase%2C C-terminal~SMART: DEAD-like helicase%2C N-terminal%3B DNA/RNA helicase%2C C-terminal~SPTR: Type III restriction protein res subunit%3B~PFAM: Helicase conserved C-terminal domain%3B Type III restriction enzyme%2C res subunit gene gene347 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0323 Sgly_0324 Sgly_0324 Sgly_0324 349876 350508 + hypothetical protein KEGG: spj:MGAS2096_Spy0566 hypothetical protein~SPTR: Putative uncharacterized protein%3B~manually curated gene gene348 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0324 Sgly_0325 Sgly_0325 Sgly_0325 350501 352747 + Primase 2 COGs: COG3598 RecA-family ATPase~InterPro IPR014819~KEGG: cce:Ccel_3304 primase 2~PFAM: Primase%2C C-terminal 2~SPTR: Primase 2%3B~PFAM: Primase C terminal 2 (PriCT-2) gene gene349 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0325 Sgly_0326 Sgly_0326 Sgly_0326 352752 352994 + hypothetical protein KEGG: cin:100181533 similar to Down syndrome cell adhesion molecule CG17800-PAJ gene gene350 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0326 Sgly_0327 Sgly_0327 Sgly_0327 353087 353248 + hypothetical protein gene gene351 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0327 Sgly_0328 Sgly_0328 Sgly_0328 353238 353630 + endodeoxyribonuclease RusA COGs: COG4570 Holliday junction resolvase~InterPro IPR008822~KEGG: cce:Ccel_3302 endodeoxyribonuclease RusA~PFAM: Endodeoxyribonuclease%2C RusA-like~SPTR: Endodeoxyribonuclease RusA%3B~PFAM: Endodeoxyribonuclease RusA gene gene352 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0328 Sgly_0329 Sgly_0329 Sgly_0329 353645 354001 + hypothetical protein KEGG: hor:Hore_03480 hypothetical protein~SPTR: Putative uncharacterized protein gene gene353 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0329 Sgly_0330 Sgly_0330 Sgly_0330 354025 354318 + hypothetical protein KEGG: amt:Amet_2593 hypothetical protein~SPTR: Putative uncharacterized protein gene gene354 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0330 Sgly_0331 Sgly_0331 Sgly_0331 354318 354764 + hypothetical protein KEGG: rlg:Rleg_2705 putative nucleotidyltransferase protein~SPTR: Putative uncharacterized protein gene gene355 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0331 Sgly_0332 Sgly_0332 Sgly_0332 354859 355386 + hypothetical protein KEGG: dsy:DSY2187 hypothetical protein~SPTR: Putative uncharacterized protein gene gene356 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0332 Sgly_0333 Sgly_0333 Sgly_0333 355498 355596 + hypothetical protein gene gene357 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0333 Sgly_0334 Sgly_0334 Sgly_0334 355669 356391 + Terminase small subunit InterPro IPR005335~KEGG: lhk:LHK_01511 hypothetical protein~PFAM: Terminase small subunit~SPTR: Putative uncharacterized protein%3B~PFAM: Terminase small subunit gene gene358 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0334 Sgly_0335 Sgly_0335 Sgly_0335 356384 357706 + putative phage terminase%2C large subunit KEGG: cce:Ccel_3297 putative phage terminase%2C large subunit~SPTR: Putative phage terminase%2C large subunit%3B~PFAM: Terminase-like family~TIGRFAM: phage terminase%2C large subunit%2C PBSX family gene gene359 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0335 Sgly_0336 Sgly_0336 Sgly_0336 357703 359157 + hypothetical protein KEGG: shi:Shel_03460 hypothetical protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: phage portal protein%2C putative%2C A118 family gene gene360 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0336 Sgly_0337 Sgly_0337 Sgly_0337 359159 359443 + hypothetical protein KEGG: dre:336563 wu:fb13g09~SPTR: Putative uncharacterized protein gene gene361 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0337 Sgly_0338 Sgly_0338 Sgly_0338 359450 361267 + minor capsid 2 protein InterPro IPR009319~KEGG: ere:EUBREC_1286 hypothetical protein~PFAM: Phage minor capsid 2~SPTR: Minor capsid 2 protein%3B~PFAM: Phage minor capsid protein 2 gene gene362 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0338 Sgly_0339 Sgly_0339 Sgly_0339 361646 362248 + hypothetical protein KEGG: lin:lin0108 putative scaffolding protein~SPTR: Putative uncharacterized protein%3B~PFAM: Phage minor structural protein GP20 gene gene363 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0339 Sgly_0340 Sgly_0340 Sgly_0340 362264 363145 + hypothetical protein KEGG: ele:Elen_2627 hypothetical protein~SPTR: Putative uncharacterized protein gene gene364 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0340 Sgly_0341 Sgly_0341 Sgly_0341 363161 363403 + hypothetical protein KEGG: rbi:RB2501_01356 hypothetical protein~SPTR: Trigger factor gene gene365 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0341 Sgly_0342 Sgly_0342 Sgly_0342 363406 363738 + hypothetical protein KEGG: cce:Ccel_3289 hypothetical protein~SPTR: Putative uncharacterized protein gene gene366 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0342 Sgly_0343 Sgly_0343 Sgly_0343 363738 364130 + hypothetical protein KEGG: ccb:Clocel_3539 hypothetical protein~SPTR: Putative uncharacterized protein gene gene367 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0343 Sgly_0344 Sgly_0344 Sgly_0344 364127 364570 + hypothetical protein KEGG: ere:EUBREC_1294 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Minor capsid gene gene368 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0344 Sgly_0345 Sgly_0345 Sgly_0345 364567 364992 + hypothetical protein KEGG: ccb:Clocel_3537 hypothetical protein~SPTR: Putative uncharacterized protein gene gene369 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0345 Sgly_0346 Sgly_0346 Sgly_0346 364997 365479 + hypothetical protein KEGG: cbb:CLD_2453 hypothetical protein~SPTR: Putative uncharacterized protein gene gene370 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0346 Sgly_0347 Sgly_0347 Sgly_0347 365534 365977 + hypothetical protein KEGG: ccb:Clocel_3535 hypothetical protein~SPTR: Putative uncharacterized protein gene gene371 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0347 Sgly_0348 Sgly_0348 Sgly_0348 365979 366554 + putative protein GP15 KEGG: ccb:Clocel_3534 putative protein GP15~SPTR: Putative uncharacterized protein%3B~PFAM: Bacteriophage Gp15 protein gene gene372 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0348 Sgly_0349 Sgly_0349 Sgly_0349 366919 367326 - phage protein KEGG: sds:SDEG_1663 phage protein~SPTR: Phage protein gene gene373 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0349 Sgly_0350 Sgly_0350 Sgly_0350 367518 367922 + hypothetical protein KEGG: cin:100182013 similar to fibronectin~SPTR: Hypothetical secreted protein gene gene374 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0350 Sgly_0351 Sgly_0351 Sgly_0351 368041 368157 + hypothetical protein SPTR: Putative uncharacterized protein%3B~manually curated gene gene375 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0351 Sgly_0352 Sgly_0352 Sgly_0352 368207 370753 + hypothetical protein KEGG: pjd:Pjdr2_1552 phage-related protein-like protein~SPTR: Phage-related protein-like protein gene gene376 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0352 Sgly_0353 Sgly_0353 Sgly_0353 370771 371115 + hypothetical protein KEGG: pjd:Pjdr2_1553 hypothetical protein~SPTR: Putative uncharacterized protein gene gene377 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0353 Sgly_0354 Sgly_0354 Sgly_0354 371126 371266 + hypothetical protein KEGG: zma:100273358 hypothetical protein LOC100273358~SPTR: Putative uncharacterized protein gene gene378 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0354 Sgly_0355 Sgly_0355 Sgly_0355 371238 371435 - hypothetical protein KEGG: ptm:GSPATT00033550001 hypothetical protein~SPTR: Putative uncharacterized protein gene gene379 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0355 Sgly_0356 Sgly_0356 Sgly_0356 371508 373136 + hypothetical protein KEGG: pjd:Pjdr2_1554 hypothetical protein~SPTR: Putative uncharacterized protein gene gene380 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0356 Sgly_0357 Sgly_0357 Sgly_0357 373137 373535 + hypothetical protein KEGG: pjd:Pjdr2_1555 hypothetical protein~SPTR: Putative uncharacterized protein gene gene381 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0357 Sgly_0358 Sgly_0358 Sgly_0358 373538 374806 + hypothetical protein KEGG: dhd:Dhaf_1424 hypothetical protein~SPTR: Putative uncharacterized protein gene gene382 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0358 Sgly_0359 Sgly_0359 Sgly_0359 374840 375139 + hypothetical protein KEGG: tye:THEYE_A0557 organic solvent tolerance protein~SPTR: Organic solvent tolerance protein gene gene383 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0359 Sgly_0360 Sgly_0360 Sgly_0360 375142 375408 + hypothetical protein KEGG: sno:Snov_0518 extracellular solute-binding protein family 1~SPTR: Extracellular solute-binding protein family 1 gene gene384 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0360 Sgly_0361 Sgly_0361 Sgly_0361 375374 377125 + hypothetical protein KEGG: pth:PTH_2177 RTX toxins and related Ca2+-binding proteins~SPTR: RTX toxins and related Ca2+-binding proteins%3B~PFAM: Glycosyl hydrolases family 16 gene gene385 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0361 Sgly_0362 Sgly_0362 Sgly_0362 377146 377442 + hypothetical protein KEGG: nmg:Nmag_2587 chromosome segregation protein SMC~SPTR: Putative uncharacterized protein gene gene386 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0362 Sgly_0363 Sgly_0363 Sgly_0363 377461 378219 + N-acetylmuramoyl-L-alanine amidase family 2 InterPro IPR002502~KEGG: xtr:595014 pglyrp1 protein~PFAM: N-acetylmuramoyl-L-alanine amidase%2C family 2~SPTR: Prophage LambdaCh01%2C N-acetylmuramoyl-L-alanine amidase%3B~PFAM: N-acetylmuramoyl-L-alanine amidase gene gene387 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0363 Sgly_0364 Sgly_0364 Sgly_0364 378219 378491 + hypothetical protein KEGG: pcr:Pcryo_0749 transmembrane pair~SPTR: Putative uncharacterized protein gene gene388 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0364 Sgly_0365 Sgly_0365 Sgly_0365 378501 378827 + hypothetical protein KEGG: cpy:Cphy_2850 phage holin~SPTR: Phage holin%2C LL-H family gene gene389 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0365 Sgly_0366 Sgly_0366 Sgly_0366 378912 379136 - hypothetical protein KEGG: pic:PICST_39662 hypothetical protein~SPTR: Helicase%2C putative gene gene390 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0366 Sgly_0367 Sgly_0367 Sgly_0367 379138 379365 - hypothetical protein KEGG: tte:TTE0605 NAD-dependent DNA ligase~SPTR: DNA ligase gene gene391 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0367 Sgly_0368 Sgly_0368 Sgly_0368 379496 380173 + hypothetical protein KEGG: bsu:BSU20950 putative transcriptional regulator%3B phage SPbeta~SPTR: Putative uncharacterized protein yopB gene gene392 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0368 Sgly_0369 Sgly_0369 Sgly_0369 380488 381687 - hypothetical protein COGs: COG2333 hydrolase (metallo-beta-lactamase superfamily)~KEGG: cth:Cthe_2752 beta-lactamase-like protein~SPTR: Beta-lactamase-like protein%3B~PFAM: Metallo-beta-lactamase superfamily gene gene393 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0369 Sgly_0370 Sgly_0370 Sgly_0370 381698 381904 - hypothetical protein KEGG: tte:TTE2431 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF3006) gene gene394 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0370 Sgly_0371 Sgly_0371 Sgly_0371 382148 382390 + hypothetical protein KEGG: fsu:Fisuc_1681 hypothetical protein~SPTR: Predicted protein gene gene395 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0371 Sgly_0372 Sgly_0372 Sgly_0372 382414 384492 + heavy metal translocating P-type ATPase COGs: COG2217 Cation transport ATPase~InterPro IPR008250: IPR005834: IPR006416: IPR001757~KEGG: amu:Amuc_1083 heavy metal translocating P-type ATPase~PFAM: ATPase%2C P-type%2C ATPase-associated domain%3B Haloacid dehalogenase-like hydrolase~PRIAM: Cadmium-exporting ATPase~SPTR: Heavy metal translocating P-type ATPase%3B~TIGRFAM: ATPase%2C P-type%2C heavy metal translocating%3B ATPase%2C P-type%2C K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter~PFAM: E1-E2 ATPase%3B haloacid dehalogenase-like hydrolase~TIGRFAM: heavy metal translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC gene gene396 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0372 Sgly_0373 Sgly_0373 Sgly_0373 384511 384912 + hypothetical protein KEGG: cth:Cthe_0077 hypothetical protein~SPTR: Putative uncharacterized protein gene gene397 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0373 Sgly_0374 Sgly_0374 Sgly_0374 385058 386530 - Methyltransferase type 11 COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis~InterPro IPR013216~KEGG: llk:LLKF_1828 2-heptaprenyl-1%2C4-naphthoquinone methyltransferase~PFAM: Methyltransferase type 11~SPTR: Methyltransferase type 11%3B~PFAM: ubiE/COQ5 methyltransferase family gene gene398 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0374 Sgly_0375 Sgly_0375 Sgly_0375 387060 388979 + methyl-accepting chemotaxis sensory transducer COGs: COG0840 Methyl-accepting chemotaxis protein~InterPro IPR004089~KEGG: ckr:CKR_1969 hypothetical protein~PFAM: Chemotaxis methyl-accepting receptor%2C signalling~SMART: Chemotaxis methyl-accepting receptor%2C signalling~SPTR: Putative uncharacterized protein%3B~PFAM: Iron only hydrogenase large subunit%2C C-terminal domain%3B Methyl-accepting chemotaxis protein (MCP) signaling domain gene gene399 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0375 Sgly_0376 Sgly_0376 Sgly_0376 389176 390036 + Protein of unknown function DUF2179 COGs: COG1284 conserved hypothetical protein~InterPro IPR003740: IPR019264~KEGG: ttm:Tthe_2653 protein of unknown function DUF2179~PFAM: Protein of unknown function DUF2179%3B Protein of unknown function DUF161~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterized BCR%2C YitT family COG1284%3B Uncharacterized protein conserved in bacteria (DUF2179) gene gene400 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0376 Sgly_0377 Sgly_0377 Sgly_0377 390141 390290 + LSU ribosomal protein L33P HAMAP: Ribosomal protein L33~InterPro IPR001705~KEGG: dhd:Dhaf_0403 50S ribosomal protein L33~PFAM: Ribosomal protein L33~SPTR: 50S ribosomal protein L33%3B~TIGRFAM: Ribosomal protein L33~PFAM: Ribosomal protein L33~TIGRFAM: ribosomal protein L33%2C bacterial type gene gene401 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0377 Sgly_0378 Sgly_0378 Sgly_0378 390332 390571 + preprotein translocase%2C SecE subunit InterPro IPR001901: IPR005807~KEGG: dhd:Dhaf_0404 preprotein translocase subunit SecE~PFAM: Protein secE/sec61-gamma protein~SPTR: Preprotein translocase%2C SecE subunit%3B~TIGRFAM: SecE subunit of protein translocation complex~PFAM: SecE/Sec61-gamma subunits of protein translocation complex~TIGRFAM: preprotein translocase%2C SecE subunit%2C bacterial gene gene402 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0378 Sgly_0379 Sgly_0379 Sgly_0379 390607 391134 + transcription antitermination protein nusG COGs: COG0250 Transcription antiterminator~InterPro IPR006645: IPR005824: IPR001062~KEGG: dhd:Dhaf_0405 NusG antitermination factor~PFAM: Transcription antitermination protein%2C NusG%2C N-terminal%3B KOW~SMART: Transcription antitermination protein%2C NusG%2C N-terminal%3B KOW~SPTR: Transcription antitermination protein nusG%3B~TIGRFAM: Transcription antitermination protein%2C NusG~PFAM: Transcription termination factor nusG%3B KOW motif~TIGRFAM: transcription termination/antitermination factor NusG gene gene403 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0379 Sgly_0380 Sgly_0380 Sgly_0380 391187 391612 + LSU ribosomal protein L11P COGs: COG0080 Ribosomal protein L11~InterPro IPR020784: IPR020783: IPR006519: IPR000911~KEGG: dhd:Dhaf_0406 50S ribosomal protein L11~PFAM: Ribosomal protein L11%2C C-terminal%3B Ribosomal protein L11%2C N-terminal~SMART: Ribosomal protein L11~SPTR: 50S ribosomal protein L11%3B~TIGRFAM: Ribosomal protein L11%2C bacterial-type~PFAM: Ribosomal protein L11%2C RNA binding domain%3B Ribosomal protein L11%2C N-terminal domain~TIGRFAM: 50S ribosomal protein L11 gene gene404 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0380 Sgly_0381 Sgly_0381 Sgly_0381 391681 392376 + LSU ribosomal protein L1P COGs: COG0081 Ribosomal protein L1~InterPro IPR002143: IPR005878~KEGG: dhd:Dhaf_0407 50S ribosomal protein L1~PFAM: Ribosomal protein L1~SPTR: 50S ribosomal protein L1%3B~TIGRFAM: Ribosomal protein L1%2C bacterial-type~PFAM: Ribosomal protein L1p/L10e family~TIGRFAM: ribosomal protein L1%2C bacterial/chloroplast gene gene405 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0381 Sgly_0382 Sgly_0382 Sgly_0382 392585 393109 + LSU ribosomal protein L10P COGs: COG0244 Ribosomal protein L10~HAMAP: 50S ribosomal protein L10~InterPro IPR001790~KEGG: dhd:Dhaf_0408 50S ribosomal protein L10~PFAM: Ribosomal protein L10~SPTR: 50S ribosomal protein L10%3B~PFAM: Ribosomal protein L10 gene gene406 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0382 Sgly_0383 Sgly_0383 Sgly_0383 393170 393550 + LSU ribosomal protein L12P COGs: COG0222 Ribosomal protein L7/L12~HAMAP: Ribosomal protein L7/L12~InterPro IPR000206: IPR013823~KEGG: tjr:TherJR_0286 ribosomal protein L7/L12~PFAM: Ribosomal protein L7/L12%2C C-terminal~SPTR: 50S ribosomal protein L7/L12%3B~TIGRFAM: Ribosomal protein L7/L12~PFAM: Ribosomal protein L7/L12 C-terminal domain~TIGRFAM: ribosomal protein L7/L12 gene gene407 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0383 Sgly_0384 Sgly_0384 Sgly_0384 393920 397312 + DNA-directed RNA polymerase subunit beta COGs: COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit~HAMAP: DNA-directed RNA polymerase%2C beta subunit%2C bacterial-type~InterPro IPR010243: IPR007644: IPR007642: IPR007645: IPR 019462: IPR007120: IPR007641~KEGG: dsy:DSY0463 DNA-directed RNA polymerase subunit beta~PFAM: DNA-directed RNA polymerase%2C subunit 2%2C domain 6%3B RNA polymerase Rpb2%2C domain 2%3B RNA polymerase%2C beta subunit%2C protrusion%3B RNA polymerase Rpb2%2C domain 3%3B DNA-directed RNA polymerase%2C beta subunit%2C external 1 domain%3B RNA polymerase Rpb2%2C domain 7~SPTR: DNA-directed RNA polymerase subunit beta%3B~TIGRFAM: DNA-directed RNA polymerase%2C beta subunit%2C bacterial-type~PFAM: RNA polymerase Rpb2%2C domain 3%3B RNA polymerase Rpb2%2C domain 6%3B RNA polymerase beta subunit external 1 domain%3B RNA polymerase Rpb2%2C domain 2%3B RNA polymerase beta subunit%3B RNA polymerase Rpb2%2C domain 7~TIGRFAM: DNA-directed RNA polymerase%2C beta subunit gene gene408 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0384 Sgly_0385 Sgly_0385 Sgly_0385 397358 400849 + DNA-directed RNA polymerase subunit beta' COGs: COG0086 DNA-directed RNA polymerase beta' subunit/160 kD subunit~HAMAP: DNA-directed RNA polymerase%2C subunit beta-prime~InterPro IPR012754: IPR007080: IPR000722: IPR007066: IPR 007083: IPR007081: IPR006592~KEGG: dsy:DSY0464 DNA-directed RNA polymerase subunit beta'~PFAM: RNA polymerase Rpb1%2C domain 1%3B RNA polymerase%2C alpha subunit%3B RNA polymerase Rpb1%2C domain 3%3B RNA polymerase Rpb1%2C domain 4%3B RNA polymerase Rpb1%2C domain 5~SMART: RNA polymerase%2C N-terminal~SPTR: DNA-directed RNA polymerase subunit beta'%3B~TIGRFAM: DNA-directed RNA polymerase%2C subunit beta-prime~PFAM: RNA polymerase Rpb1%2C domain 2%3B RNA polymerase Rpb1%2C domain 4%3B RNA polymerase Rpb1%2C domain 1%3B RNA polymerase Rpb1%2C domain 3%3B RNA polymerase Rpb1%2C domain 5~TIGRFAM: DNA-directed RNA polymerase%2C beta' subunit%2C predominant form gene gene409 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0385 Sgly_0386 Sgly_0386 Sgly_0386 400916 401167 + LSU ribosomal protein L7AE KEGG: dhd:Dhaf_0416 ribosomal protein L7AE family protein~SPTR: Probable ribosomal protein%3B~PFAM: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family gene gene410 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0386 Sgly_0387 Sgly_0387 Sgly_0387 401243 401659 + SSU ribosomal protein S12P COGs: COG0048 Ribosomal protein S12~InterPro IPR006032: IPR005679~KEGG: dhd:Dhaf_0417 30S ribosomal protein S12~PFAM: Ribosomal protein S12/S23~SPTR: 30S ribosomal protein S12%3B~TIGRFAM: Ribosomal protein S12%2C bacterial-type~PFAM: Ribosomal protein S12~TIGRFAM: ribosomal protein S12%2C bacterial/organelle gene gene411 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0387 Sgly_0388 Sgly_0388 Sgly_0388 401707 402177 + SSU ribosomal protein S7P COGs: COG0049 Ribosomal protein S7~InterPro IPR000235: IPR005717~KEGG: dhd:Dhaf_0418 30S ribosomal protein S7~PFAM: Ribosomal protein S7~SPTR: 30S ribosomal protein S7%3B~TIGRFAM: Ribosomal protein S7%2C bacterial-type~PFAM: Ribosomal protein S7p/S5e~TIGRFAM: ribosomal protein S7%2C bacterial/organelle gene gene412 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0388 Sgly_0389 Sgly_0389 Sgly_0389 402223 404301 + translation elongation factor 2 (EF-2/EF-G) COGs: COG0480 Translation elongation factors (GTPase)~InterPro IPR000795: IPR004161: IPR005517: IPR000640: IPR 004540: IPR005225~KEGG: dsy:DSY0468 elongation factor G~PFAM: Protein synthesis factor%2C GTP-binding%3B Translation elongation factor EFTu/EF1A%2C domain 2%3B Translation elongation factor EFG/EF2%2C domain IV%3B Translation elongation factor EFG/EF2%2C C-terminal~SPTR: Elongation factor G%3B~TIGRFAM: Translation elongation factor EFG/EF2%3B Small GTP-binding protein~PFAM: Elongation factor Tu domain 2%3B Elongation factor G C-terminus%3B Elongation factor Tu GTP binding domain%3B Elongation factor G%2C domain IV~TIGRFAM: translation elongation factor EF-G%3B small GTP-binding protein domain gene gene413 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0389 Sgly_0390 Sgly_0390 Sgly_0390 404335 405537 + translation elongation factor 1A (EF-1A/EF-Tu) COGs: COG0050 GTPase - translation elongation factors~InterPro IPR000795: IPR004161: IPR004160: IPR004541: IPR 005225~KEGG: dhd:Dhaf_0420 elongation factor Tu~PFAM: Protein synthesis factor%2C GTP-binding%3B Translation elongation factor EFTu/EF1A%2C domain 2%3B Translation elongation factor EFTu/EF1A%2C C-terminal~SPTR: Elongation factor Tu%3B~TIGRFAM: Translation elongation factor EFTu/EF1A%2C bacterial/organelle%3B Small GTP-binding protein~PFAM: Elongation factor Tu domain 2%3B Elongation factor Tu C-terminal domain%3B Elongation factor Tu GTP binding domain~TIGRFAM: small GTP-binding protein domain%3B translation elongation factor TU gene gene414 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0390 Sgly_0391 Sgly_0391 Sgly_0391 405703 406008 + SSU ribosomal protein S10P COGs: COG0051 Ribosomal protein S10~HAMAP: Ribosomal protein S10 subgroup~InterPro IPR005731: IPR001848~KEGG: dhd:Dhaf_0421 30S ribosomal protein S10~PFAM: Ribosomal protein S10~SPTR: 30S ribosomal protein S10%3B~TIGRFAM: Ribosomal protein S10 subgroup~PFAM: Ribosomal protein S10p/S20e~TIGRFAM: ribosomal protein S10%2C bacterial/organelle gene gene415 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0391 Sgly_0392 Sgly_0392 Sgly_0392 406189 406818 + LSU ribosomal protein L3P COGs: COG0087 Ribosomal protein L3~InterPro IPR000597: IPR019927~KEGG: dsy:DSY0471 50S ribosomal protein L3~PFAM: Ribosomal protein L3~SPTR: 50S ribosomal protein L3%3B~TIGRFAM: Ribosomal protein L3%2C bacterial/organelle-type~PFAM: Ribosomal protein L3~TIGRFAM: 50S ribosomal protein L3%2C bacterial gene gene416 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0392 Sgly_0393 Sgly_0393 Sgly_0393 406843 407472 + LSU ribosomal protein L4P COGs: COG0088 Ribosomal protein L4~InterPro IPR002136~KEGG: dsy:DSY0472 50S ribosomal protein L4~PFAM: Ribosomal protein L4/L1e~SPTR: 50S ribosomal protein L4%3B~PFAM: Ribosomal protein L4/L1 family gene gene417 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0393 Sgly_0394 Sgly_0394 Sgly_0394 407465 407752 + LSU ribosomal protein L23P COGs: COG0089 Ribosomal protein L23~InterPro IPR013025~KEGG: dsy:DSY0473 50S ribosomal protein L23~PFAM: Ribosomal protein L25/L23~SPTR: 50S ribosomal protein L23%3B~PFAM: Ribosomal protein L23 gene gene418 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0394 Sgly_0395 Sgly_0395 Sgly_0395 407784 408611 + LSU ribosomal protein L2P COGs: COG0090 Ribosomal protein L2~InterPro IPR002171: IPR005880~KEGG: dhd:Dhaf_0425 50S ribosomal protein L2~PFAM: Ribosomal protein L2~SPTR: 50S ribosomal protein L2%3B~TIGRFAM: Ribosomal protein L2%2C bacterial-type~PFAM: Ribosomal Proteins L2%2C RNA binding domain%3B Ribosomal Proteins L2%2C C-terminal domain~TIGRFAM: ribosomal protein L2%2C bacterial/organellar gene gene419 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0395 Sgly_0396 Sgly_0396 Sgly_0396 408632 408913 + SSU ribosomal protein S19P COGs: COG0185 Ribosomal protein S19~InterPro IPR002222: IPR005732~KEGG: dhd:Dhaf_0426 30S ribosomal protein S19~PFAM: Ribosomal protein S19/S15~SPTR: 30S ribosomal protein S19%3B~TIGRFAM: Ribosomal protein S19%2C bacterial-type~PFAM: Ribosomal protein S19~TIGRFAM: ribosomal protein S19%2C bacterial/organelle gene gene420 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0396 Sgly_0397 Sgly_0397 Sgly_0397 408936 409277 + LSU ribosomal protein L22P COGs: COG0091 Ribosomal protein L22~InterPro IPR001063: IPR005727~KEGG: dsy:DSY0476 50S ribosomal protein L22~PFAM: Ribosomal protein L22/L17~SPTR: 50S ribosomal protein L22%3B~TIGRFAM: Ribosomal protein L22%2C bacterial-type~PFAM: Ribosomal protein L22p/L17e~TIGRFAM: ribosomal protein L22%2C bacterial type gene gene421 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0397 Sgly_0398 Sgly_0398 Sgly_0398 409282 409944 + SSU ribosomal protein S3P COGs: COG0092 Ribosomal protein S3~InterPro IPR008282: IPR004044: IPR001351: IPR005704: IPR 004087~KEGG: dsy:DSY0477 30S ribosomal protein S3~PFAM: Ribosomal protein S3%2C C-terminal%3B Ribosomal protein S3%2C N-terminal%3B K Homology%2C type 2~SMART: K Homology~SPTR: 30S ribosomal protein S3%3B~TIGRFAM: Ribosomal protein S3%2C bacterial~PFAM: KH domain%3B Ribosomal protein S3%2C C-terminal domain%3B Ribosomal protein S3%2C N-terminal domain~TIGRFAM: ribosomal protein S3%2C bacterial type gene gene422 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0398 Sgly_0399 Sgly_0399 Sgly_0399 409945 410394 + LSU ribosomal protein L16P COGs: COG0197 Ribosomal protein L16/L10E~HAMAP: Ribosomal protein L16~InterPro IPR000114: IPR016180~KEGG: slp:Slip_2230 ribosomal protein L16~PFAM: Ribosomal protein L10e/L16~SPTR: 50S ribosomal protein L16%3B~TIGRFAM: Ribosomal protein L16~PFAM: Ribosomal protein L16p/L10e~TIGRFAM: ribosomal protein L16%2C bacterial/organelle gene gene423 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0399 Sgly_0400 Sgly_0400 Sgly_0400 410381 410581 + LSU ribosomal protein L29P COGs: COG0255 Ribosomal protein L29~InterPro IPR001854~KEGG: dhd:Dhaf_0430 50S ribosomal protein L29~PFAM: Ribosomal protein L29~SPTR: 50S ribosomal protein L29%3B~TIGRFAM: Ribosomal protein L29~PFAM: Ribosomal L29 protein~TIGRFAM: ribosomal protein L29 gene gene424 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0400 Sgly_0401 Sgly_0401 Sgly_0401 410607 410867 + SSU ribosomal protein S17P COGs: COG0186 Ribosomal protein S17~InterPro IPR000266: IPR019984~KEGG: aac:Aaci_2702 30S ribosomal protein S17~PFAM: Ribosomal protein S17~SPTR: 30S ribosomal protein S17%3B~TIGRFAM: Ribosomal protein S17%2C bacterial-type~PFAM: Ribosomal protein S17~TIGRFAM: 30S ribosomal protein S17 gene gene425 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0401 Sgly_0402 Sgly_0402 Sgly_0402 410932 411300 + LSU ribosomal protein L14P COGs: COG0093 Ribosomal protein L14~InterPro IPR000218: IPR005745~KEGG: dsy:DSY0481 50S ribosomal protein L14~PFAM: Ribosomal protein L14b/L23e~SPTR: 50S ribosomal protein L14%3B~TIGRFAM: Ribosomal protein L14%2C bacterial-type~PFAM: Ribosomal protein L14p/L23e~TIGRFAM: ribosomal protein L14%2C bacterial/organelle gene gene426 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0402 Sgly_0403 Sgly_0403 Sgly_0403 411330 411674 + LSU ribosomal protein L24P COGs: COG0198 Ribosomal protein L24~InterPro IPR005824: IPR003256~KEGG: dhd:Dhaf_0433 50S ribosomal protein L24~PFAM: KOW~SMART: KOW~SPTR: 50S ribosomal protein L24%3B~TIGRFAM: Ribosomal protein L24~PFAM: KOW motif~TIGRFAM: ribosomal protein L24%2C bacterial/organelle gene gene427 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0403 Sgly_0404 Sgly_0404 Sgly_0404 411695 412234 + LSU ribosomal protein L5P COGs: COG0094 Ribosomal protein L5~KEGG: tjr:TherJR_0308 ribosomal protein L5~SPTR: 50S ribosomal protein L5%3B~PFAM: ribosomal L5P family C-terminus%3B Ribosomal protein L5 gene gene428 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0404 Sgly_0405 Sgly_0405 Sgly_0405 412254 412439 + SSU ribosomal protein S14P COGs: COG0199 Ribosomal protein S14~InterPro IPR001209~KEGG: dhd:Dhaf_0435 30S ribosomal protein S14~PFAM: Ribosomal protein S14~SPTR: 30S ribosomal protein S14 type Z%3B~PFAM: Ribosomal protein S14p/S29e gene gene429 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0405 Sgly_0406 Sgly_0406 Sgly_0406 412470 412868 + SSU ribosomal protein S8P COGs: COG0096 Ribosomal protein S8~InterPro IPR000630~KEGG: dhd:Dhaf_0436 30S ribosomal protein S8~PFAM: Ribosomal protein S8~SPTR: 30S ribosomal protein S8%3B~PFAM: Ribosomal protein S8 gene gene430 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0406 Sgly_0407 Sgly_0407 Sgly_0407 412886 413428 + LSU ribosomal protein L6P COGs: COG0097 Ribosomal protein L6P/L9E~InterPro IPR020040: IPR019906~KEGG: dhd:Dhaf_0437 50S ribosomal protein L6~PFAM: Ribosomal protein L6%2C alpha-beta domain~SPTR: 50S ribosomal protein L6%3B~TIGRFAM: Ribosomal protein L6%2C bacterial-type~PFAM: Ribosomal protein L6~TIGRFAM: ribosomal protein L6%2C bacterial type gene gene431 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0407 Sgly_0408 Sgly_0408 Sgly_0408 413474 413842 + LSU ribosomal protein L18P COGs: COG0256 Ribosomal protein L18~InterPro IPR005484: IPR004389~KEGG: dsy:DSY0487 50S ribosomal protein L18~PFAM: Ribosomal protein L18/L5~SPTR: 50S ribosomal protein L18%3B~TIGRFAM: Ribosomal protein L18%2C bacterial~PFAM: Ribosomal L18p/L5e family~TIGRFAM: ribosomal protein L18%2C bacterial type gene gene432 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0408 Sgly_0409 Sgly_0409 Sgly_0409 413869 414369 + SSU ribosomal protein S5P COGs: COG0098 Ribosomal protein S5~InterPro IPR013810: IPR005324: IPR005712~KEGG: dhd:Dhaf_0439 30S ribosomal protein S5~PFAM: Ribosomal protein S5%2C N-terminal%3B Ribosomal protein S5%2C C-terminal~SPTR: 30S ribosomal protein S5%3B~TIGRFAM: Ribosomal protein S5%2C bacterial-type~PFAM: Ribosomal protein S5%2C C-terminal domain%3B Ribosomal protein S5%2C N-terminal domain~TIGRFAM: ribosomal protein S5%2C bacterial/organelle type gene gene433 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0409 Sgly_0410 Sgly_0410 Sgly_0410 414415 414858 + LSU ribosomal protein L15P COGs: COG0200 Ribosomal protein L15~InterPro IPR005749~KEGG: dsy:DSY0490 50S ribosomal protein L15~SPTR: 50S ribosomal protein L15%3B~TIGRFAM: Ribosomal protein L15%2C bacterial-type~PFAM: Ribosomal protein L18e/L15~TIGRFAM: ribosomal protein L15%2C bacterial/organelle gene gene434 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0410 Sgly_0411 Sgly_0411 Sgly_0411 414859 416151 + protein translocase subunit secY/sec61 alpha COGs: COG0201 Preprotein translocase subunit SecY~InterPro IPR002208~KEGG: dhd:Dhaf_0442 preprotein translocase subunit SecY~PFAM: SecY protein~SPTR: Preprotein translocase subunit secY%3B~TIGRFAM: SecY protein~PFAM: eubacterial secY protein~TIGRFAM: preprotein translocase%2C SecY subunit gene gene435 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0411 Sgly_0412 Sgly_0412 Sgly_0412 416167 416811 + Adenylate kinase COGs: COG0563 Adenylate kinase and related kinase~HAMAP: Adenylate kinase~InterPro IPR000850: IPR007862: IPR006259~KEGG: dhd:Dhaf_0443 adenylate kinase~PFAM: Adenylate kinase%3B Adenylate kinase%2C active site lid domain~SPTR: Adenylate kinase%3B~TIGRFAM: Adenylate kinase%2C subfamily~PFAM: Adenylate kinase%2C active site lid%3B Adenylate kinase~TIGRFAM: adenylate kinases gene gene436 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0412 Sgly_0413 Sgly_0413 Sgly_0413 416813 417559 + methionine aminopeptidase%2C type I COGs: COG0024 Methionine aminopeptidase~InterPro IPR000994: IPR002467~KEGG: dhd:Dhaf_0444 methionine aminopeptidase%2C type I~PFAM: Peptidase M24%2C structural domain~PRIAM: Methionyl aminopeptidase~SPTR: Methionine aminopeptidase%3B~TIGRFAM: Peptidase M24A%2C methionine aminopeptidase%2C subfamily 1~PFAM: Metallopeptidase family M24~TIGRFAM: methionine aminopeptidase%2C type I gene gene437 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0413 Sgly_0414 Sgly_0414 Sgly_0414 417596 417814 + bacterial translation initiation factor 1 (bIF-1) COGs: COG0361 Translation initiation factor 1 (IF-1)~HAMAP: Translation initiation factor IF-1~InterPro IPR004368: IPR006196~KEGG: drm:Dred_0238 translation initiation factor IF-1~PFAM: S1%2C IF1 type~SPTR: Translation initiation factor IF-1%3B~TIGRFAM: Translation initiation factor IF-1~PFAM: Translation initiation factor 1A / IF-1~TIGRFAM: translation initiation factor IF-1 gene gene438 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0414 Sgly_0415 Sgly_0415 Sgly_0415 417832 417945 + LSU ribosomal protein L36P HAMAP: Ribosomal protein L36~InterPro IPR000473~KEGG: dhd:Dhaf_0446 50S ribosomal protein L36~PFAM: Ribosomal protein L36~SPTR: 50S ribosomal protein L36%3B~TIGRFAM: Ribosomal protein L36~manually curated~PFAM: Ribosomal protein L36~TIGRFAM: ribosomal protein L36%2C bacterial type gene gene439 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0415 Sgly_0416 Sgly_0416 Sgly_0416 418036 418404 + SSU ribosomal protein S13P COGs: COG0099 Ribosomal protein S13~InterPro IPR001892: IPR019980~KEGG: sti:Sthe_1061 ribosomal protein S13~PFAM: Ribosomal protein S13~SPTR: 30S ribosomal protein S13%3B~TIGRFAM: Ribosomal protein S13%2C bacterial-type~PFAM: Ribosomal protein S13/S18~TIGRFAM: 30S ribosomal protein S13 gene gene440 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0416 Sgly_0417 Sgly_0417 Sgly_0417 418419 418808 + SSU ribosomal protein S11P COGs: COG0100 Ribosomal protein S11~InterPro IPR001971: IPR019981~KEGG: dhd:Dhaf_0448 30S ribosomal protein S11~PFAM: Ribosomal protein S11~SPTR: 30S ribosomal protein S11%3B~TIGRFAM: Ribosomal protein S11%2C bacterial-type~PFAM: Ribosomal protein S11~TIGRFAM: 30S ribosomal protein S11 gene gene441 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0417 Sgly_0418 Sgly_0418 Sgly_0418 418826 419455 + SSU ribosomal protein S4P COGs: COG0522 Ribosomal protein S4 and related protein~InterPro IPR001912: IPR002942: IPR005709~KEGG: dhd:Dhaf_0449 30S ribosomal protein S4~PFAM: Ribosomal protein S4%3B RNA-binding S4~SMART: RNA-binding S4~SPTR: 30S ribosomal protein S4%3B~TIGRFAM: Ribosomal protein S4%2C bacterial-type~PFAM: Ribosomal protein S4/S9 N-terminal domain%3B S4 domain~TIGRFAM: ribosomal protein S4%2C bacterial/organelle type gene gene442 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0418 Sgly_0419 Sgly_0419 Sgly_0419 419483 420430 + DNA-directed RNA polymerase subunit alpha COGs: COG0202 DNA-directed RNA polymerase alpha subunit/40 kD subunit~HAMAP: DNA-directed RNA polymerase%2C alpha subunit~InterPro IPR011773: IPR011261: IPR011262: IPR011260: IPR 011263~KEGG: dhd:Dhaf_0450 DNA-directed RNA polymerase subunit alpha~PFAM: DNA-directed RNA polymerase%2C insert%3B DNA-directed RNA polymerase%2C dimerisation%3B RNA polymerase%2C alpha subunit%2C C-terminal~SMART: DNA-directed RNA polymerase%2C RpoA/D/Rpb3-type~SPTR: DNA-directed RNA polymerase subunit alpha%3B~TIGRFAM: DNA-directed RNA polymerase%2C alpha subunit~PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain%3B RNA polymerase Rpb3/RpoA insert domain%3B Bacterial RNA polymerase%2C alpha chain C terminal domain~TIGRFAM: DNA-directed RNA polymerase%2C alpha subunit%2C bacterial and chloroplast-type gene gene443 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0419 Sgly_0420 Sgly_0420 Sgly_0420 420451 420792 + LSU ribosomal protein L17P COGs: COG0203 Ribosomal protein L17~HAMAP: Ribosomal protein L17~InterPro IPR000456~KEGG: mta:Moth_2430 50S ribosomal protein L17~PFAM: Ribosomal protein L17~SPTR: 50S ribosomal protein L17%3B~TIGRFAM: Ribosomal protein L17~PFAM: Ribosomal protein L17~TIGRFAM: ribosomal protein L17 gene gene444 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0420 Sgly_0421 Sgly_0421 Sgly_0421 420863 421666 + tRNA pseudouridine synthase A COGs: COG0101 Pseudouridylate synthase~HAMAP: Pseudouridine synthase I%2C TruA~InterPro IPR001406: IPR020097~KEGG: dsy:DSY0516 hypothetical protein~PFAM: Pseudouridine synthase I%2C TruA%2C alpha/beta domain~SPTR: tRNA pseudouridine synthase A%3B~TIGRFAM: Pseudouridine synthase I%2C TruA~PFAM: tRNA pseudouridine synthase~TIGRFAM: pseudouridylate synthase I gene gene445 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0421 Sgly_0422 Sgly_0422 Sgly_0422 421817 422248 + LSU ribosomal protein L13P COGs: COG0102 Ribosomal protein L13~InterPro IPR005822: IPR005823~KEGG: dhd:Dhaf_0726 50S ribosomal protein L13~PFAM: Ribosomal protein L13~SPTR: 50S ribosomal protein L13%3B~TIGRFAM: Ribosomal protein L13%2C bacterial-type~PFAM: Ribosomal protein L13~TIGRFAM: ribosomal protein L13%2C bacterial type gene gene446 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0422 Sgly_0423 Sgly_0423 Sgly_0423 422269 422664 + SSU ribosomal protein S9P COGs: COG0103 Ribosomal protein S9~InterPro IPR000754~KEGG: dhd:Dhaf_0727 30S ribosomal protein S9~PFAM: Ribosomal protein S9~SPTR: 30S ribosomal protein S9%3B~PFAM: Ribosomal protein S9/S16 gene gene447 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0423 Sgly_0424 Sgly_0424 Sgly_0424 422732 423169 - helix-turn-helix domain protein InterPro IPR001387~KEGG: bpf:BpOF4_06445 hypothetical protein~SMART: Helix-turn-helix type 3~SPTR: Transcriptional regulator%2C XRE family gene gene448 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0424 Sgly_0425 Sgly_0425 Sgly_0425 423906 424592 + integral membrane protein%2C YjbE family COGs: COG0861 Membrane protein TerC possibly involved in tellurium resistance~InterPro IPR005496~KEGG: gyc:GYMC61_1401 integral membrane protein TerC~PFAM: Integral membrane protein TerC~SPTR: Integral membrane protein TerC%3B~TIGRFAM: integral membrane protein%2C YjbE family~PFAM: Integral membrane protein TerC family~TIGRFAM: integral membrane protein%2C YjbE family gene gene449 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0425 Sgly_0426 Sgly_0426 Sgly_0426 424658 425080 + UspA domain-containing protein COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein~InterPro IPR006016~KEGG: dsy:DSY4453 hypothetical protein~PFAM: UspA~SPTR: Putative uncharacterized protein%3B~PFAM: Universal stress protein family gene gene450 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0426 Sgly_0427 Sgly_0427 Sgly_0427 425269 426075 + cell wall hydrolase/autolysin COGs: COG0860 N-acetylmuramoyl-L-alanine amidase~InterPro IPR002508~KEGG: dhd:Dhaf_0751 cell wall hydrolase/autolysin~PFAM: Cell wall hydrolase/autolysin%2C catalytic~SMART: Cell wall hydrolase/autolysin%2C catalytic~SPTR: Putative uncharacterized protein%3B~PFAM: N-acetylmuramoyl-L-alanine amidase~TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD gene gene451 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0427 Sgly_0428 Sgly_0428 Sgly_0428 426332 427513 + amidohydrolase COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase~InterPro IPR002933: IPR011650: IPR010168~KEGG: dhd:Dhaf_0758 amidohydrolase~PFAM: Peptidase M20%3B Peptidase M20%2C dimerisation~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Peptidase M20D%2C amidohydrolase~PFAM: Peptidase dimerisation domain~TIGRFAM: amidohydrolase gene gene452 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0428 Sgly_0429 Sgly_0429 Sgly_0429 427580 428611 + N-acetyl-gamma-glutamyl-phosphate reductase COGs: COG0002 Acetylglutamate semialdehyde dehydrogenase~HAMAP: N-acetyl-gamma-glutamyl-phosphate reductase~InterPro IPR000706: IPR000534: IPR012280~KEGG: dhd:Dhaf_0769 N-acetyl-gamma-glutamyl-phosphate reductase~PFAM: Semialdehyde dehydrogenase%2C NAD-binding%3B Semialdehyde dehydrogenase%2C dimerisation domain~PRIAM: N-acetyl-gamma-glutamyl-phosphate reductase~SPTR: N-acetyl-gamma-glutamyl-phosphate reductase%3B~TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase~PFAM: Semialdehyde dehydrogenase%2C dimerisation domain%3B Semialdehyde dehydrogenase%2C NAD binding domain~TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase%2C common form gene gene453 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0429 Sgly_0430 Sgly_0430 Sgly_0430 428644 429879 + N-acetylglutamate synthase%3B glutamate N-acetyltransferase COGs: COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase)~HAMAP: Arginine biosynthesis protein ArgJ~InterPro IPR002813~KEGG: dsy:DSY0761 hypothetical protein~PFAM: Arginine biosynthesis protein ArgJ~PRIAM: Amino-acid N-acetyltransferase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Arginine biosynthesis protein ArgJ~PFAM: ArgJ family~TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase gene gene454 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0430 Sgly_0431 Sgly_0431 Sgly_0431 429932 430822 + N-acetylglutamate kinase COGs: COG0548 Acetylglutamate kinase~InterPro IPR001048: IPR004662~KEGG: dsy:DSY0762 hypothetical protein~PFAM: Aspartate/glutamate/uridylate kinase~PRIAM: Acetylglutamate kinase~SPTR: Acetylglutamate kinase%3B~TIGRFAM: Acetylglutamate kinase~PFAM: Amino acid kinase family~TIGRFAM: acetylglutamate kinase gene gene455 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0431 Sgly_0432 Sgly_0432 Sgly_0432 430860 432074 + acetylornithine aminotransferase apoenzyme COGs: COG4992 Ornithine/acetylornithine aminotransferase~HAMAP: Acetylornithine/succinyldiaminopimelate aminotransferase~InterPro IPR005814: IPR004636~KEGG: dhd:Dhaf_0772 acetylornithine and succinylornithine aminotransferase~PFAM: Aminotransferase class-III~PRIAM: Acetylornithine transaminase~SPTR: Acetylornithine and succinylornithine aminotransferase%3B~TIGRFAM: Acetylornithine/succinylornithine aminotransferase~PFAM: Aminotransferase class-III~TIGRFAM: acetylornithine and succinylornithine aminotransferases gene gene456 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0432 Sgly_0433 Sgly_0433 Sgly_0433 432183 433283 + carbamoyl-phosphate synthase small subunit COGs: COG0505 Carbamoylphosphate synthase small subunit~InterPro IPR002474: IPR000991: IPR006274~KEGG: dsy:DSY2043 hypothetical protein~PFAM: Carbamoyl phosphate synthase%2C small subunit%2C N-terminal%3B Glutamine amidotransferase class-I%2C C-terminal~PRIAM: Carbamoyl-phosphate synthase (glutamine-hydrolyzing)~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Carbamoyl phosphate synthase%2C small subunit~PFAM: Carbamoyl-phosphate synthase small chain%2C CPSase domain%3B Glutamine amidotransferase class-I~TIGRFAM: carbamoyl-phosphate synthase%2C small subunit gene gene457 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0433 Sgly_0434 Sgly_0434 Sgly_0434 433273 436500 + carbamoyl-phosphate synthase large subunit COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ)~InterPro IPR005481: IPR005479: IPR005480: IPR011607: IPR 006275~KEGG: dsy:DSY2042 hypothetical protein~PFAM: Carbamoyl phosphate synthetase%2C large subunit%2C ATP-binding%3B Carbamoyl phosphate synthase%2C large subunit%2C N-terminal%3B Carbamoyl phosphate synthetase%2C large subunit%2C oligomerisation%3B MGS-like~PRIAM: Carbamoyl-phosphate synthase (ammonia)~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Carbamoyl phosphate synthase%2C large subunit%2C glutamine-dependent~PFAM: Carbamoyl-phosphate synthase L chain%2C ATP binding domain%3B MGS-like domain%3B Carbamoyl-phosphate synthetase large chain%2C oligomerisation domain%3B Carbamoyl-phosphate synthase L chain%2C N-terminal domain~TIGRFAM: carbamoyl-phosphate synthase%2C large subunit gene gene458 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0434 Sgly_0435 Sgly_0435 Sgly_0435 437090 438274 + Aspartate transaminase COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase~InterPro IPR004839~KEGG: aco:Amico_1183 aminotransferase class I and II~PFAM: Aminotransferase%2C class I/II~PRIAM: Aspartate transaminase~SPTR: Aspartate transaminase%3B~PFAM: Aminotransferase class I and II gene gene459 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0435 Sgly_0436 Sgly_0436 Sgly_0436 438422 438628 - hypothetical protein KEGG: tmt:Tmath_0737 protein of unknown function UPF0150~SPTR: Putative uncharacterized protein gene gene460 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0436 Sgly_0437 Sgly_0437 Sgly_0437 438724 438987 - hypothetical protein KEGG: aoe:Clos_1043 hypothetical protein~SPTR: Putative uncharacterized protein gene gene461 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0437 Sgly_0438 Sgly_0438 Sgly_0438 438984 439403 - phage shock protein C%2C PspC COGs: COG1983 Putative stress-responsive transcriptional regulator protein~InterPro IPR007168~KEGG: ttm:Tthe_1095 phage shock protein C%2C PspC~PFAM: PspC~SPTR: Phage shock protein C%2C PspC%3B~PFAM: PspC domain gene gene462 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0438 Sgly_0439 Sgly_0439 Sgly_0439 439645 443934 + CoA-substrate-specific enzyme activase COGs: COG3580 conserved hypothetical protein~InterPro IPR002731: IPR018709: IPR008275~KEGG: swo:Swol_1945 putative activator of (R) -2-hydroxyglutaryl-CoA dehydratase~PFAM: Protein of unknown function DUF2229%2C CoA enzyme activase%3B ATPase%2C BadF/BadG/BcrA/BcrD type~SPTR: Putative activator of (R)-2-hydroxyglutaryl-coA dehydratase%3B~TIGRFAM: CoA enzyme activase~PFAM: 2-hydroxyglutaryl-CoA dehydratase%2C D-component%3B BadF/BadG/BcrA/BcrD ATPase family%3B CoA enzyme activase uncharacterised domain (DUF2229)~TIGRFAM: CoA-substrate-specific enzyme activase%2C putative gene gene463 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0439 Sgly_0440 Sgly_0440 Sgly_0440 444065 444826 + transcriptional regulator%2C LuxR family COGs: COG3860 conserved hypothetical protein~InterPro IPR000792: IPR018656~KEGG: bcy:Bcer98_1417 hypothetical protein~PFAM: Protein of unknown function DUF2087%3B Transcription regulator LuxR%2C C-terminal~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterized protein conserved in bacteria (DUF2087)%3B Bacterial regulatory proteins%2C luxR family gene gene464 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0440 Sgly_0441 Sgly_0441 Sgly_0441 444896 445276 + hypothetical protein KEGG: mxa:MXAN_0975 hypothetical protein~SPTR: Putative uncharacterized protein gene gene465 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0441 Sgly_0442 Sgly_0442 Sgly_0442 445370 446371 - hypothetical protein KEGG: dhd:Dhaf_0793 hypothetical protein~SPTR: Putative uncharacterized protein gene gene466 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0442 Sgly_0443 Sgly_0443 Sgly_0443 446613 447557 + ornithine carbamoyltransferase COGs: COG0078 Ornithine carbamoyltransferase~HAMAP: Ornithine carbamoyltransferase~InterPro IPR002292: IPR006132: IPR006131~KEGG: dhd:Dhaf_0794 ornithine carbamoyltransferase~PFAM: Aspartate/ornithine carbamoyltransferase%2C Asp/Orn-binding domain%3B Aspartate/ornithine carbamoyltransferase%2C carbamoyl-P binding~PRIAM: Ornithine carbamoyltransferase~SPTR: Ornithine carbamoyltransferase%3B~TIGRFAM: Ornithine carbamoyltransferase~PFAM: Aspartate/ornithine carbamoyltransferase%2C carbamoyl-P binding domain%3B Aspartate/ornithine carbamoyltransferase%2C Asp/Orn binding domain~TIGRFAM: ornithine carbamoyltransferase gene gene467 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0443 Sgly_0444 Sgly_0444 Sgly_0444 447576 448784 + argininosuccinate synthase COGs: COG0137 Argininosuccinate synthase~HAMAP: Argininosuccinate synthase~InterPro IPR001518~KEGG: dhd:Dhaf_0795 argininosuccinate synthase~PFAM: Argininosuccinate synthase~PRIAM: Argininosuccinate synthase~SPTR: Argininosuccinate synthase%3B~TIGRFAM: Argininosuccinate synthase~PFAM: Arginosuccinate synthase~TIGRFAM: argininosuccinate synthase gene gene468 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0444 Sgly_0445 Sgly_0445 Sgly_0445 448950 449486 + Chromate transporter COGs: COG2059 Chromate transport protein ChrA~InterPro IPR003370~KEGG: dhd:Dhaf_2840 chromate transporter~PFAM: Chromate transporter region~SPTR: Putative uncharacterized protein%3B~PFAM: Chromate transporter gene gene469 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0445 Sgly_0446 Sgly_0446 Sgly_0446 449518 450057 + Chromate transporter COGs: COG2059 Chromate transport protein ChrA~InterPro IPR003370~KEGG: dhd:Dhaf_2840 chromate transporter~PFAM: Chromate transporter region~SPTR: Putative uncharacterized protein%3B~PFAM: Chromate transporter gene gene470 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0446 Sgly_0447 Sgly_0447 Sgly_0447 450195 451049 - Heat shock protein COGs: COG0501 Zn-dependent protease with chaperone function~HAMAP: protease htpX~InterPro IPR001915~KEGG: tjr:TherJR_0554 peptidase M48 Ste24p~PFAM: Peptidase M48~SPTR: Peptidase M48 Ste24p%3B~PFAM: Peptidase family M48 gene gene471 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0447 Sgly_0448 Sgly_0448 Sgly_0448 451150 451827 - integral membrane protein%2C YjbE family COGs: COG0861 Membrane protein TerC possibly involved in tellurium resistance~InterPro IPR005496~KEGG: drm:Dred_0428 integral membrane protein TerC~PFAM: Integral membrane protein TerC~SPTR: Integral membrane protein TerC%3B~TIGRFAM: integral membrane protein%2C YjbE family~PFAM: Integral membrane protein TerC family~TIGRFAM: integral membrane protein%2C YjbE family gene gene472 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0448 Sgly_0449 Sgly_0449 Sgly_0449 452188 453567 + argininosuccinate lyase COGs: COG0165 Argininosuccinate lyase~HAMAP: Argininosuccinate lyase~InterPro IPR009049: IPR000362~KEGG: dhd:Dhaf_0796 argininosuccinate lyase~PFAM: Fumarate lyase~PRIAM: Argininosuccinate lyase~SPTR: Argininosuccinate lyase%3B~TIGRFAM: Argininosuccinate lyase~PFAM: Lyase~TIGRFAM: argininosuccinate lyase gene gene473 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0449 Sgly_0450 Sgly_0450 Sgly_0450 453890 454444 + hypothetical protein COGs: COG5663 conserved hypothetical protein~KEGG: dhd:Dhaf_0800 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: 5' nucleotidase%2C deoxy (Pyrimidine)%2C cytosolic type C protein (NT5C) gene gene474 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0450 Sgly_0451 Sgly_0451 Sgly_0451 454469 455830 - UDP-N-acetylmuramate--L-alanine ligase COGs: COG0773 UDP-N-acetylmuramate-alanine ligase~HAMAP: UDP-N-acetylmuramate-alanine ligase~InterPro IPR005758: IPR000713: IPR013221: IPR004101~KEGG: dhd:Dhaf_0802 UDP-N-acetylmuramate/alanine ligase~PFAM: Mur ligase%2C central%3B Mur ligase%2C N-terminal%3B Mur ligase%2C C-terminal~PRIAM: UDP-N-acetylmuramate--L-alanine ligase~SPTR: UDP-N-acetylmuramate--L-alanine ligase%3B~TIGRFAM: UDP-N-acetylmuramate-alanine ligase~PFAM: Mur ligase family%2C glutamate ligase domain%3B Mur ligase family%2C catalytic domain%3B Mur ligase middle domain~TIGRFAM: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase%3B UDP-N-acetylmuramate--alanine ligase gene gene475 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0451 Sgly_0452 Sgly_0452 Sgly_0452 456379 456600 - hypothetical protein SPTR: Vitellogenin gene gene476 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0452 Sgly_0453 Sgly_0453 Sgly_0453 456914 457315 + CoA-binding domain protein COGs: COG1832 CoA-binding protein~InterPro IPR003781~KEGG: tle:Tlet_0835 CoA-binding domain-containing protein~PFAM: CoA-binding~SPTR: CoA-binding domain protein%3B~PFAM: CoA binding domain gene gene477 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0453 Sgly_0454 Sgly_0454 Sgly_0454 457404 457970 + signal peptidase I InterPro IPR019759: IPR000223~KEGG: cth:Cthe_2079 thylakoidal processing peptidase~PFAM: Peptidase S24/S26A/S26B%2C conserved region~SPTR: Thylakoidal processing peptidase. Serine peptidase. MEROPS family S26A%3B~TIGRFAM: Peptidase S26A%2C signal peptidase I~PFAM: Peptidase S26%3B Peptidase S24-like~TIGRFAM: signal peptidase I%2C bacterial type gene gene478 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0454 Sgly_0455 Sgly_0455 Sgly_0455 458051 458305 + hypothetical protein KEGG: ssl:SS1G_10280 hypothetical protein~SPTR: Putative uncharacterized protein gene gene479 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0455 Sgly_0456 Sgly_0456 Sgly_0456 458359 458877 + hypothetical protein KEGG: ngr:NAEGRDRAFT_80798 C2 and zinc finger domain-containing protein~SPTR: Putative uncharacterized protein gene gene480 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0456 Sgly_0457 Sgly_0457 Sgly_0457 459092 459325 + protein of unknown function DUF378 COGs: COG2155 conserved hypothetical protein~InterPro IPR007211~KEGG: ccb:Clocel_1593 hypothetical protein~PFAM: Protein of unknown function DUF378~SPTR: Putative uncharacterized protein%3B~PFAM: Domain of unknown function (DUF378) gene gene481 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0457 Sgly_0458 Sgly_0458 Sgly_0458 459422 459502 - pseudogene gene482 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0458 Sgly_0459 Sgly_0459 Sgly_0459 459713 460903 - transposase mutator type COGs: COG3328 Transposase and inactivated derivatives~InterPro IPR001207~KEGG: dap:Dacet_1494 transposase mutator type~PFAM: Transposase%2C mutator type~SPTR: Transposase mutator type%3B~PFAM: Transposase%2C Mutator family gene gene483 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0459 Sgly_0460 Sgly_0460 Sgly_0460 461009 461593 - Di-trans%2Cpoly-cis-decaprenylcistransferase COGs: COG0020 Undecaprenyl pyrophosphate synthase~InterPro IPR001441~KEGG: clj:CLJU_c35470 undecaprenyl pyrophosphate synthase~PFAM:Di-trans-poly-cis-decaprenylcistransferase-lik e~PRIAM: Di-trans%2Cpoly-cis-decaprenylcistransferase~SPTR: Undecaprenyl pyrophosphate synthase%3B~PFAM: Putative undecaprenyl diphosphate synthase~TIGRFAM: undecaprenyl diphosphate synthase gene gene484 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0460 Sgly_0461 Sgly_0461 Sgly_0461 461733 462917 - Aspartate transaminase COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase~InterPro IPR004839~KEGG: cth:Cthe_0580 aspartate aminotransferase~PFAM: Aminotransferase%2C class I/II~PRIAM: Aspartate transaminase~SPTR: Aminotransferase class I and II%3B~PFAM: Aminotransferase class I and II gene gene485 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0461 Sgly_0462 Sgly_0462 Sgly_0462 463075 463782 + RNA polymerase sigma-I factor InterPro IPR007627: IPR014244: IPR014284~KEGG: dhd:Dhaf_4761 putative RNA polymerase sigma factor SigI~PFAM: RNA polymerase sigma-70 region 2~SPTR: Putative uncharacterized protein%3B~TIGRFAM: RNA polymerase sigma-I type%3B RNA polymerase sigma-70~PFAM: Sigma-70 region 2~TIGRFAM: RNA polymerase sigma-I factor%3B RNA polymerase sigma factor%2C sigma-70 family gene gene486 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0462 Sgly_0463 Sgly_0463 Sgly_0463 463785 464876 + hypothetical protein KEGG: dsy:DSY4883 hypothetical protein~SPTR: Putative uncharacterized protein gene gene487 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0463 Sgly_0464 Sgly_0464 Sgly_0464 464978 465889 + hypothetical protein KEGG: thx:Thet_0047 hypothetical protein~SPTR: Putative uncharacterized protein gene gene488 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0464 Sgly_0465 Sgly_0465 Sgly_0465 465992 466411 - hypothetical protein KEGG: tva:TVAG_307050 Repeated sequence found in lipoprotein LPP containing protein~SPTR: Surface protein gene gene489 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0465 Sgly_0466 Sgly_0466 Sgly_0466 466591 466995 + hemerythrin-like metal-binding protein COGs: COG2703 Hemerythrin~InterPro IPR012312: IPR012827~KEGG: tte:TTE0259 hemerythrin~PFAM: Haemerythrin/HHE cation-binding motif~SPTR: Hemerythrin%3B~TIGRFAM: Haemerythrin-like%2C metal-binding~PFAM: Hemerythrin HHE cation binding domain~TIGRFAM: hemerythrin-like metal-binding domain gene gene490 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0466 Sgly_0467 Sgly_0467 Sgly_0467 467354 467500 + hypothetical protein KEGG: dhd:Dhaf_3476 hypothetical protein~SPTR: Putative uncharacterized protein gene gene491 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0467 Sgly_0468 Sgly_0468 Sgly_0468 467599 468681 - Fe(3+)-transporting ATPase COGs: COG1118 ABC-type sulfate/molybdate transport systems ATPase component~InterPro IPR003439: IPR003593~KEGG: clj:CLJU_c22150 putative molybdate ABC transporter ATPase~PFAM: ABC transporter-like~PRIAM: Fe(3+)-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative molybdate ABC transporter%2C ATPase component%3B~PFAM: ABC transporter gene gene492 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0468 Sgly_0469 Sgly_0469 Sgly_0469 468683 469369 - molybdate ABC transporter%2C inner membrane subunit COGs: COG4149 ABC-type molybdate transport system permease component~InterPro IPR000515: IPR011867~KEGG: ckr:CKR_2731 hypothetical protein~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Molybdate ABC transporter%2C permease protein~PFAM: Binding-protein-dependent transport system inner membrane component~TIGRFAM: molybdate ABC transporter%2C permease protein gene gene493 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0469 Sgly_0470 Sgly_0470 Sgly_0470 469446 470237 - molybdenum ABC transporter%2C periplasmic molybdate-binding protein COGs: COG0725 ABC-type molybdate transport system periplasmic component~InterPro IPR006059: IPR005950~KEGG: ckr:CKR_2732 hypothetical protein~PFAM: Bacterial extracellular solute-binding%2C family 1~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Molybdenum ABC transporter%2C periplasmic binding protein~PFAM: Bacterial extracellular solute-binding protein~TIGRFAM: molybdenum ABC transporter%2C periplasmic molybdate-binding protein gene gene494 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0470 Sgly_0471 Sgly_0471 Sgly_0471 470620 471540 + DNA binding domain protein%2C excisionase family COGs: COG1910 Periplasmic molybdate-binding protein/domain~InterPro IPR010093~KEGG: clj:CLJU_c04890 putative molybdate-binding protein~SPTR: DNA binding domain protein%2C excisionase family%3B~TIGRFAM: Excisionase/Xis%2C DNA-binding~TIGRFAM: DNA binding domain%2C excisionase family gene gene495 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0471 Sgly_0472 Sgly_0472 Sgly_0472 471753 471950 + hypothetical protein KEGG: mst:Msp_1095 DNA double-strand break repair protein Rad50 gene gene496 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0472 Sgly_0473 Sgly_0473 Sgly_0473 472268 472501 - hypothetical protein KEGG: cel:T20B6.3 hypothetical protein~SPTR: Putative uncharacterized protein gene gene497 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0473 Sgly_0474 Sgly_0474 Sgly_0474 472843 473730 + pseudouridine synthase%2C RluA family COGs: COG0564 Pseudouridylate synthase 23S RNA-specific~InterPro IPR006145: IPR006225~KEGG: drm:Dred_3230 RluA family pseudouridine synthase~PFAM: Pseudouridine synthase%2C RsuA and RluB/C/D/E/F~SPTR: Pseudouridine synthase%3B~TIGRFAM: Pseudouridine synthase%2C RluC/RluD~PFAM: RNA pseudouridylate synthase~TIGRFAM: pseudouridine synthase%2C RluA family gene gene498 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0474 Sgly_0475 Sgly_0475 Sgly_0475 473740 474690 - Peptide methionine sulfoxide reductase msrB COGs: COG0225 Peptide methionine sulfoxide reductase~HAMAP: Peptide methionine sulfoxide reductase msrB%3B Peptide methionine sulphoxide reductase MsrA~InterPro IPR002569: IPR002579~KEGG: amu:Amuc_0906 methionine-R-sulfoxide reductase~PFAM: Methionine sulphoxide reductase B%3B Peptide methionine sulphoxide reductase MsrA~PRIAM: Peptide-methionine (S)-S-oxide reductase.%2C Peptide-methionine (R)-S-oxide reductase~SPTR: Methionine-R-sulfoxide reductase%3B~TIGRFAM: Methionine sulphoxide reductase B%3B Peptide methionine sulphoxide reductase MsrA~PFAM: SelR domain%3B Peptide methionine sulfoxide reductase~TIGRFAM: methionine-S-sulfoxide reductase%3B methionine-R-sulfoxide reductase gene gene499 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0475 Sgly_0476 Sgly_0476 Sgly_0476 474808 476040 - integral membrane sensor signal transduction histidine kinase COGs: COG0642 Signal transduction histidine kinase~InterPro IPR003661: IPR003594~KEGG: ele:Elen_0372 histidine kinase~PFAM: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain~SMART: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain~SPTR: Putative uncharacterized protein%3B~PFAM: Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain gene gene500 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0476 Sgly_0477 Sgly_0477 Sgly_0477 476037 476714 - two component transcriptional regulator%2C winged helix family COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR001789: IPR001867~KEGG: shi:Shel_13160 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain~PFAM: Signal transduction response regulator%2C receiver domain%3B Signal transduction response regulator%2C C-terminal~SMART: Signal transduction response regulator%2C receiver domain~SPTR: Putative uncharacterized protein%3B~PFAM: Response regulator receiver domain%3B Transcriptional regulatory protein%2C C terminal gene gene501 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0477 Sgly_0478 Sgly_0478 Sgly_0478 476906 477631 + VTC domain-containing protein InterPro IPR018966~KEGG: dhd:Dhaf_2305 hypothetical protein~PFAM: VTC domain~SPTR: VTC domain protein%3B~PFAM: VTC domain gene gene502 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0478 Sgly_0479 Sgly_0479 Sgly_0479 477624 478301 + hypothetical protein KEGG: dhd:Dhaf_2306 hypothetical protein~SPTR: Putative uncharacterized protein gene gene503 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0479 Sgly_0480 Sgly_0480 Sgly_0480 478396 480285 + hypothetical protein KEGG: mpi:Mpet_1171 hypothetical protein~SPTR: Putative lipoprotein gene gene504 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0480 Sgly_0481 Sgly_0481 Sgly_0481 480666 481175 + GCN5-related N-acetyltransferase InterPro IPR000182~KEGG: cwo:Cwoe_5177 GCN5-related N-acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: GCN5-related N-acetyltransferase%3B~PFAM: Acetyltransferase (GNAT) family gene gene506 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0481 Sgly_0482 Sgly_0482 Sgly_0482 481709 482032 - MazG nucleotide pyrophosphohydrolase InterPro IPR004518~KEGG: dhd:Dhaf_0830 MazG nucleotide pyrophosphohydrolase~PFAM: NTP pyrophosphohydrolase MazG%2C putative catalytic core~SPTR: Putative uncharacterized protein%3B~PFAM: MazG nucleotide pyrophosphohydrolase domain gene gene507 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0482 Sgly_0483 Sgly_0483 Sgly_0483 482169 482996 + Conserved hypothetical protein CHP00159 COGs: COG1624 conserved hypothetical protein~InterPro IPR003390: IPR014046~KEGG: dhd:Dhaf_0832 protein of unknown function DUF147~PFAM: DNA integrity scanning protein%2C DisA%2C N-terminal~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Conserved hypothetical protein CHP00159~PFAM: DisA bacterial checkpoint controller nucleotide-binding~TIGRFAM: conserved hypothetical protein TIGR00159 gene gene508 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0483 Sgly_0484 Sgly_0484 Sgly_0484 482993 484303 + YbbR family protein COGs: COG4856 conserved hypothetical protein~InterPro IPR012505~KEGG: dsy:DSY4488 hypothetical protein~PFAM: YbbR-like~SPTR: Putative uncharacterized protein%3B~PFAM: YbbR-like protein gene gene509 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0484 Sgly_0485 Sgly_0485 Sgly_0485 484336 485943 + FAD-dependent pyridine nucleotide-disulfide oxidoreductase COGs: COG2509 Uncharacterized FAD-dependent dehydrogenase~InterPro IPR013027: IPR006076~KEGG: dhd:Dhaf_0834 FAD dependent oxidoreductase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B FAD dependent oxidoreductase~SPTR: Putative uncharacterized protein%3B~PFAM: Pyridine nucleotide-disulphide oxidoreductase gene gene510 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0485 Sgly_0486 Sgly_0486 Sgly_0486 485970 487319 + phosphoglucosamine mutase COGs: COG1109 Phosphomannomutase~InterPro IPR005844: IPR005845: IPR005846: IPR005843: IPR 006352~KEGG: dhd:Dhaf_0835 phosphoglucosamine mutase~PFAM: Alpha-D-phosphohexomutase%2C alpha/beta/alpha domain I%3B Alpha-D-phosphohexomutase%2C alpha/beta/alpha domain II%3B Alpha-D-phosphohexomutase%2C alpha/beta/alpha domain III%3B Alpha-D-phosphohexomutase%2C C-terminal~PRIAM: Phosphoglucosamine mutase~SPTR: Phosphoglucosamine mutase%3B~TIGRFAM: Phosphoglucosamine mutase~PFAM: Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain II%3B Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain III%3B Phosphoglucomutase/phosphomannomutase%2C C-terminal domain%3B Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain I~TIGRFAM: phosphoglucosamine mutase gene gene511 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0486 Sgly_0487 Sgly_0487 Sgly_0487 487875 489698 + glutamine--fructose-6-phosphate transaminase COGs: COG0449 Glucosamine 6-phosphate synthetase contains amidotransferase and phosphosugar isomerase domains~HAMAP: Glucosamine-fructose-6-phosphate aminotransferase%2C isomerising~InterPro IPR005855: IPR000583: IPR001347~KEGG: dhd:Dhaf_0836 glucosamine/fructose-6-phosphate aminotransferase%2C isomerizing~PFAM: Glutamine amidotransferase%2C class-II%3B Sugar isomerase (SIS)~PRIAM: Glutamine--fructose-6-phosphate transaminase (isomerizing)~SPTR: Glucosamine/fructose-6-phosphate aminotransferase%2C isomerizing%3B~TIGRFAM: Glucosamine-fructose-6-phosphate aminotransferase%2C isomerising~PFAM: SIS domain%3B Glutamine amidotransferases class-II~TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing) gene gene512 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0487 Sgly_0488 Sgly_0488 Sgly_0488 489944 491149 + glycine betaine/L-proline ABC transporter%2C ATPase subunit COGs: COG4175 ABC-type proline/glycine betaine transport system ATPase component~InterPro IPR003439: IPR000644: IPR005892: IPR003593~KEGG: dhd:Dhaf_2310 glycine betaine/L-proline ABC transporter%2C ATPase subunit~PFAM: ABC transporter-like%3B Cystathionine beta-synthase%2C core~PRIAM: Quaternary-amine-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core%3B Cystathionine beta-synthase%2C core~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Glycine betaine/L-proline transport ATP-binding subunit~PFAM: ABC transporter%3B CBS domain~TIGRFAM: glycine betaine/L-proline transport ATP binding subunit gene gene513 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0488 Sgly_0489 Sgly_0489 Sgly_0489 491142 491981 + binding-protein-dependent transport systems inner membrane component COGs: COG4176 ABC-type proline/glycine betaine transport system permease component~InterPro IPR000515~KEGG: dhd:Dhaf_2309 binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Putative uncharacterized protein%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene514 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0489 Sgly_0490 Sgly_0490 Sgly_0490 492003 492890 + Substrate-binding region of ABC-type glycine betaine transport system COGs: COG2113 ABC-type proline/glycine betaine transport systems periplasmic components~InterPro IPR007210~KEGG: dhd:Dhaf_2308 substrate-binding region of ABC-type glycine betaine transport system~PFAM: ABC-type glycine betaine transport system%2C substrate-binding domain~SPTR: Putative uncharacterized protein%3B~PFAM: Substrate binding domain of ABC-type glycine betaine transport system gene gene515 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0490 Sgly_0491 Sgly_0491 Sgly_0491 493143 494708 + Cl- channel voltage-gated family protein COGs: COG0038 Chloride channel protein EriC~InterPro IPR001807: IPR006037~KEGG: drm:Dred_2944 Cl-channel%2C voltage-gated family protein~PFAM: Chloride channel%2C voltage gated%3B Regulator of K+ conductance%2C C-terminal~SPTR: Cl-channel%2C voltage-gated family protein%3B~PFAM: Voltage gated chloride channel%3B TrkA-C domain gene gene516 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0491 Sgly_0492 Sgly_0492 Sgly_0492 494759 495415 - TrkA-N domain protein COGs: COG0569 K+ transport systems NAD-binding component~InterPro IPR003148: IPR006037~KEGG: toc:Toce_1400 TrkA-N domain protein~PFAM: Regulator of K+ conductance%2C N-terminal%3B Regulator of K+ conductance%2C C-terminal~SPTR: TrkA-N domain protein%3B~PFAM: TrkA-N domain%3B TrkA-C domain gene gene517 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0492 Sgly_0493 Sgly_0493 Sgly_0493 495425 496789 - potassium uptake protein%2C TrkH family COGs: COG0168 Trk-type K+ transport systems membrane components~InterPro IPR003445: IPR004772~KEGG: chy:CHY_1575 potassium uptake protein KtrB~PFAM: Cation transporter~PRIAM: H(+)-transporting two-sector ATPase~SPTR: Potassium uptake protein KtrB%3B~TIGRFAM: Potassium uptake protein TrkH~PFAM: Cation transport protein~TIGRFAM: potassium uptake protein%2C TrkH family gene gene518 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0493 Sgly_0494 Sgly_0494 Sgly_0494 497074 497691 + thymidylate synthase%2C flavin-dependent COGs: COG1351 alternative thymidylate synthase~InterPro IPR003669~KEGG: dbr:Deba_1514 thymidylate synthase%2C flavin-dependent~PFAM: Thymidylate synthase ThyX~SPTR: ThyX%3B~TIGRFAM: Thymidylate synthase ThyX~PFAM: Thymidylate synthase complementing protein~TIGRFAM: thymidylate synthase%2C flavin-dependent gene gene519 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0494 Sgly_0495 Sgly_0495 Sgly_0495 497778 499517 - VanW family protein COGs: COG2720 Uncharacterized vancomycin resistance protein~InterPro IPR007253: IPR011081: IPR007391~KEGG: dsy:DSY0772 hypothetical protein~PFAM: VanW%3B Bacterial Ig-related%3B Putative cell wall binding repeat 2~SPTR: Putative uncharacterized protein%3B~PFAM: Putative cell wall binding repeat 2%3B Bacterial Ig-like domain (group 4)%3B VanW like protein gene gene520 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0495 Sgly_0496 Sgly_0496 Sgly_0496 499748 500545 + RNA-binding S4 domain protein COGs: COG2302 conserved hypothetical protein contains S4-like domain~InterPro IPR002942~KEGG: cth:Cthe_0789 RNA-binding S4~PFAM: RNA-binding S4~SMART: RNA-binding S4~SPTR: Putative uncharacterized protein%3B~PFAM: S4 domain gene gene521 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0496 Sgly_0497 Sgly_0497 Sgly_0497 500600 501268 - NLP/P60 protein COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein)~InterPro IPR002477: IPR000064~KEGG: dhd:Dhaf_2683 NLP/P60 protein~PFAM: NLP/P60%3B Peptidoglycan binding-like~SPTR: Putative uncharacterized protein%3B~PFAM: NlpC/P60 family%3B Putative peptidoglycan binding domain gene gene522 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0497 Sgly_0498 Sgly_0498 Sgly_0498 501480 502169 + two component transcriptional regulator%2C winged helix family COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR001789: IPR001867~KEGG: toc:Toce_1455 two component transcriptional regulator%2C winged helix family~PFAM: Signal transduction response regulator%2C receiver domain%3B Signal transduction response regulator%2C C-terminal~SMART: Signal transduction response regulator%2C receiver domain~SPTR: Putative uncharacterized protein%3B~PFAM: Response regulator receiver domain%3B Transcriptional regulatory protein%2C C terminal gene gene523 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0498 Sgly_0499 Sgly_0499 Sgly_0499 502170 503924 + multi-sensor signal transduction histidine kinase COGs: COG5002 Signal transduction histidine kinase~InterPro IPR003660: IPR003661: IPR003594~KEGG: toc:Toce_1454 multi-sensor signal transduction histidine kinase~PFAM: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain%3B HAMP linker domain~SMART: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain%3B HAMP linker domain~SPTR: Multi-sensor signal transduction histidine kinase%3B~PFAM: HAMP domain%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain gene gene524 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0499 Sgly_0500 Sgly_0500 Sgly_0500 504113 505180 + sulfate ABC transporter%2C periplasmic sulfate-binding protein COGs: COG1613 ABC-type sulfate transport system periplasmic component~InterPro IPR006059: IPR005669~KEGG: dhd:Dhaf_4118 sulfate ABC transporter%2C periplasmic sulfate-binding protein~PFAM: Bacterial extracellular solute-binding%2C family 1~SPTR: Sulfate ABC transporter%2C periplasmic sulfate-binding protein%3B~TIGRFAM: Thiosulphate-binding protein~PFAM: Bacterial extracellular solute-binding protein~TIGRFAM: sulfate/thiosulfate-binding protein gene gene525 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0500 Sgly_0501 Sgly_0501 Sgly_0501 505311 506162 + sulfate ABC transporter%2C inner membrane subunit CysT COGs: COG0555 ABC-type sulfate transport system permease component~InterPro IPR000515: IPR005667: IPR011865~KEGG: dhd:Dhaf_4117 sulfate ABC transporter%2C inner membrane subunit CysT~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Sulfate ABC transporter%2C inner membrane subunit CysT%3B~TIGRFAM: Sulphate ABC transporter%2C permease protein CysT%3B Sulphate ABC transporter permease protein 2~PFAM: Binding-protein-dependent transport system inner membrane component~TIGRFAM: sulfate ABC transporter%2C permease protein%3B sulfate ABC transporter%2C permease protein CysT gene gene526 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0501 Sgly_0502 Sgly_0502 Sgly_0502 506174 507010 + sulfate ABC transporter%2C inner membrane subunit CysW COGs: COG4208 ABC-type sulfate transport system permease component~InterPro IPR000515: IPR005667: IPR011866~KEGG: dhd:Dhaf_4116 sulfate ABC transporter%2C inner membrane subunit CysW~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Sulfate ABC transporter%2C inner membrane subunit CysW%3B~TIGRFAM: Sulphate ABC transporter%2C permease protein CysW%3B Sulphate ABC transporter permease protein 2~PFAM: Binding-protein-dependent transport system inner membrane component~TIGRFAM: sulfate ABC transporter%2C permease protein CysW%3B sulfate ABC transporter%2C permease protein gene gene527 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0502 Sgly_0503 Sgly_0503 Sgly_0503 507007 508080 + sulfate ABC transporter%2C ATPase subunit COGs: COG1118 ABC-type sulfate/molybdate transport systems ATPase component~InterPro IPR003439: IPR005666: IPR003593~KEGG: dsy:DSY2955 hypothetical protein~PFAM: ABC transporter-like~PRIAM: Sulfate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Sulphate transport system permease protein 1~PFAM: ABC transporter~TIGRFAM: sulfate ABC transporter%2C ATP-binding protein gene gene528 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0503 Sgly_0504 Sgly_0504 Sgly_0504 508164 509363 + ROK family protein COGs: COG1940 Transcriptional regulator/sugar kinase~InterPro IPR000600~KEGG: dhd:Dhaf_4114 ROK family protein~PFAM: ROK~SPTR: ROK family protein%3B~PFAM: ROK family gene gene529 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0504 Sgly_0505 Sgly_0505 Sgly_0505 509408 510118 + phosphoadenylylsulfate reductase (thioredoxin) COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase~InterPro IPR002500: IPR004511: IPR011798~KEGG: cth:Cthe_2535 phosphoadenylylsulfate reductase (thioredoxin)~PFAM: Phosphoadenosine phosphosulphate reductase~PRIAM: Phosphoadenylyl-sulfate reductase (thioredoxin)~SPTR: Adenylylsulfate reductase%2C thioredoxin dependent%3B~TIGRFAM: Adenylylsulphate reductase%2C thioredoxin dependent%3B Phosphoadenosine phosphosulphate reductase CysH-type~PFAM: Phosphoadenosine phosphosulfate reductase family~TIGRFAM: thioredoxin-dependent adenylylsulfate APS reductase%3B phosophoadenylyl-sulfate reductase (thioredoxin) gene gene530 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0505 Sgly_0506 Sgly_0506 Sgly_0506 510184 511062 + sulfate adenylyltransferase subunit 2 COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase~InterPro IPR002500~KEGG: dhd:Dhaf_4112 sulfate adenylyltransferase subunit 2~PFAM: Phosphoadenosine phosphosulphate reductase~PRIAM: Sulfate adenylyltransferase~SPTR: Phosphoadenosine phosphosulfate reductase%3B~PFAM: Phosphoadenosine phosphosulfate reductase family gene gene531 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0506 Sgly_0507 Sgly_0507 Sgly_0507 511064 512860 + sulfate adenylyltransferase subunit 1%3B adenylylsulfate kinase COGs: COG2895 GTPase - Sulfate adenylate transferase subunit 1~InterPro IPR000795: IPR004161: IPR005225: IPR011779~KEGG: cth:Cthe_2537 adenylylsulfate kinase / sulfate adenylyltransferase subunit 1~PFAM: Protein synthesis factor%2C GTP-binding%3B Translation elongation factor EFTu/EF1A%2C domain 2~PRIAM: Sulfate adenylyltransferase~SPTR: Adenylylsulfate kinase / sulfate adenylyltransferase subunit 1%3B~TIGRFAM: Sulphate adenylyltransferase%2C large subunit%3B Small GTP-binding protein~PFAM: Elongation factor Tu GTP binding domain%3B Adenylylsulphate kinase~TIGRFAM: sulfate adenylyltransferase%2C large subunit%3B small GTP-binding protein domain%3B translation elongation factor TU gene gene532 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0507 Sgly_0508 Sgly_0508 Sgly_0508 512966 513175 + thiamine biosynthesis protein ThiS InterPro IPR003749: IPR010035~KEGG: cth:Cthe_2538 thiamine biosynthesis protein ThiS~PFAM: ThiamineS~SPTR: Thiamine biosynthesis protein ThiS%3B~TIGRFAM: ThiS%2C thiamine-biosynthesis~PFAM: ThiS family~TIGRFAM: thiamine biosynthesis protein ThiS gene gene533 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0508 Sgly_0509 Sgly_0509 Sgly_0509 513172 513984 + UBA/THIF-type NAD/FAD binding protein COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2~InterPro IPR000594: IPR007901~KEGG: cth:Cthe_2539 UBA/ThiF-type NAD/FAD binding fold~PFAM: UBA/THIF-type NAD/FAD binding fold%3B MoeZ/MoeB~SPTR: UBA/THIF-type NAD/FAD binding fold%3B~PFAM: MoeZ/MoeB domain%3B ThiF family gene gene534 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0509 Sgly_0510 Sgly_0510 Sgly_0510 514026 514448 + Mov34/MPN/PAD-1 family protein COGs: COG1310 metal-dependent protease of the PAD1/JAB1 superfamily~InterPro IPR000555~KEGG: csc:Csac_1636 Mov34/MPN/PAD-1 family protein~PFAM: Mov34/MPN/PAD-1~SMART: Mov34/MPN/PAD-1~SPTR: Mov34/MPN/PAD-1 family protein%3B~PFAM: Mov34/MPN/PAD-1 family gene gene535 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0510 Sgly_0511 Sgly_0511 Sgly_0511 514449 515315 + nitrite and sulphite reductase 4Fe-4S region COGs: COG2221 Dissimilatory sulfite reductase (desulfoviridin) alpha and beta subunits~InterPro IPR005117: IPR006067~KEGG: cth:Cthe_2541 nitrite and sulphite reductase 4Fe-4S region~PFAM: Nitrite/sulphite reductase 4Fe-4S domain%3B Nitrite/sulphite reductase%2C hemoprotein beta-component%2C ferrodoxin-like~SPTR: Nitrite and sulphite reductase 4Fe-4S region%3B~PFAM: Nitrite and sulphite reductase 4Fe-4S domain%3B Nitrite/Sulfite reductase ferredoxin-like half domain gene gene536 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0511 Sgly_0512 Sgly_0512 Sgly_0512 515312 515560 + SirA-like domain-containing protein InterPro IPR001455~KEGG: dhd:Dhaf_4106 SirA family protein~PFAM: SirA-like~SPTR: Putative uncharacterized protein%3B~PFAM: SirA-like protein gene gene537 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0512 Sgly_0513 Sgly_0513 Sgly_0513 515557 516786 + Cysteine synthase COGs: COG2873 O-acetylhomoserine sulfhydrylase~InterPro IPR000277~KEGG: ttm:Tthe_1589 cysteine synthase~PFAM: Cys/Met metabolism%2C pyridoxal phosphate-dependent enzyme~PRIAM: Cysteine synthase~SPTR: Cysteine synthase%3B~PFAM: Cys/Met metabolism PLP-dependent enzyme gene gene538 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0513 Sgly_0514 Sgly_0514 Sgly_0514 516864 518195 - 4Fe-4S ferredoxin iron-sulfur binding domain protein COGs: COG0348 Polyferredoxin~KEGG: dhd:Dhaf_2488 4Fe-4S ferredoxin iron-sulfur binding domain protein~SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein gene gene539 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0514 Sgly_0515 Sgly_0515 Sgly_0515 518182 518634 - hypothetical protein KEGG: scl:sce6506 hypothetical protein~SPTR: Putative uncharacterized protein gene gene540 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0515 Sgly_0516 Sgly_0516 Sgly_0516 518946 519584 + precorrin-2 dehydrogenase COGs: COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain)~InterPro IPR006367~KEGG: dsy:DSY2227 putative precorrin-2 oxidase~SPTR: Putative precorrin-2 oxidase%3B~TIGRFAM: Sirohaem synthase%2C N-terminal~PFAM: Sirohaem synthase dimerisation region~TIGRFAM: siroheme synthase%2C N-terminal domain gene gene541 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0516 Sgly_0517 Sgly_0517 Sgly_0517 519560 520390 + Glutamyl-tRNA reductase COGs: COG0373 Glutamyl-tRNA reductase~HAMAP: Tetrapyrrole biosynthesis%2C glutamyl-tRNA reductase~InterPro IPR000343: IPR015895: IPR006151~KEGG: dhd:Dhaf_3355 glutamyl-tRNA reductase~PFAM: Tetrapyrrole biosynthesis%2C glutamyl-tRNA reductase%2C N-terminal%3B Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase~SPTR: Glutamyl-tRNA reductase%3B~TIGRFAM: Tetrapyrrole biosynthesis%2C glutamyl-tRNA reductase~PFAM: Shikimate / quinate 5-dehydrogenase%3B Glutamyl-tRNAGlu reductase%2C N-terminal domain~TIGRFAM: glutamyl-tRNA reductase gene gene542 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0517 Sgly_0518 Sgly_0518 Sgly_0518 521023 521457 - helix-turn-helix domain protein InterPro IPR001387~KEGG: amt:Amet_4400 XRE family plasmid maintenance system antidote protein~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3~SPTR: Phage transcriptional regulator%3B~PFAM: Helix-turn-helix gene gene543 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0518 Sgly_0519 Sgly_0519 Sgly_0519 521612 521854 + hypothetical protein KEGG: bss:BSUW23_09720 hypothetical protein~SPTR: Putative uncharacterized protein gene gene544 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0519 Sgly_0520 Sgly_0520 Sgly_0520 521802 522122 + hypothetical protein KEGG: dae:Dtox_4208 hypothetical protein~SPTR: Putative uncharacterized protein gene gene545 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0520 Sgly_0521 Sgly_0521 Sgly_0521 522365 522583 + helix-turn-helix domain protein InterPro IPR001387~KEGG: cac:CA_C3639 CRO repressor-like DNA-binding protein~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3~SPTR: CRO repressor-like DNA-binding protein%3B~PFAM: Helix-turn-helix gene gene546 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0521 Sgly_0522 Sgly_0522 Sgly_0522 522597 522908 + hypothetical protein KEGG: tva:TVAG_193760 DNA-directed RNA polymerase%2C omega subunit family protein~SPTR: DNA-directed RNA polymerase%2C omega subunit family protein gene gene547 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0522 Sgly_0523 Sgly_0523 Sgly_0523 523067 525151 + Transposase-like Mu InterPro IPR001584: IPR015378~KEGG: amt:Amet_0388 transposase~PFAM: Transposase-like%2C Mu%2C C-terminal%3B Integrase%2C catalytic core~SPTR: Mu transposase%2C C-superfamily%3B~PFAM: Mu transposase%2C C-terminal%3B Bacteriophage Mu transposase gene gene548 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0523 Sgly_0524 Sgly_0524 Sgly_0524 525151 526143 + transcriptional regulator%2C XRE family COGs: COG2842 Uncharacterized ATPase putative transposase~KEGG: amt:Amet_4393 hypothetical protein~SPTR: Uncharacterized ATPase%2C putative transposase%3B~PFAM: Helix-turn-helix gene gene549 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0524 Sgly_0525 Sgly_0525 Sgly_0525 526164 526472 + hypothetical protein KEGG: tel:tlr1124 putative branched chain ABC transporter ATP-binding protein~SPTR: GTP-binding protein engA gene gene550 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0525 Sgly_0526 Sgly_0526 Sgly_0526 526472 526984 + prophage MuMc02%2C host-nuclease inhibitor protein KEGG: mca:MCA2948 prophage MuMc02%2C host-nuclease inhibitor protein~SPTR: Bacteriophage Mu Gam like protein%3B~PFAM: Bacteriophage Mu Gam like protein gene gene551 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0526 Sgly_0527 Sgly_0527 Sgly_0527 526996 527466 + hypothetical protein KEGG: amt:Amet_4387 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1018) gene gene552 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0527 Sgly_0528 Sgly_0528 Sgly_0528 527441 527827 + hypothetical protein KEGG: bsb:Bresu_2241 ribosomal protein S21~SPTR: Toxin-antitoxin system%2C toxin component%2C RelE family gene gene553 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0528 Sgly_0529 Sgly_0529 Sgly_0529 527840 529330 + cell wall hydrolase/autolysin COGs: COG0860 N-acetylmuramoyl-L-alanine amidase~InterPro IPR002508~KEGG: cno:NT01CX_2058 hypothetical protein~PFAM: Cell wall hydrolase/autolysin%2C catalytic~SMART: Cell wall hydrolase/autolysin%2C catalytic~SPTR: N-acetylmuramoyl-L-alanine amidase%3B~PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase%3B N-acetylmuramoyl-L-alanine amidase gene gene554 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0529 Sgly_0530 Sgly_0530 Sgly_0530 529349 529678 + Mor transcription activator domain protein InterPro IPR014875~KEGG: amt:Amet_4373 hypothetical protein~PFAM: Mor transcription activator~SPTR: Mor transcription activator family%3B~PFAM: Mor transcription activator family gene gene555 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0530 Sgly_0531 Sgly_0531 Sgly_0531 529799 530233 + hypothetical protein KEGG: amt:Amet_4372 hypothetical protein~SPTR: Putative uncharacterized protein gene gene556 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0531 Sgly_0532 Sgly_0532 Sgly_0532 530246 530542 + hypothetical protein KEGG: amt:Amet_4371 hypothetical protein~SPTR: Predicted protein gene gene557 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0532 Sgly_0533 Sgly_0533 Sgly_0533 530547 530861 + hypothetical protein KEGG: amt:Amet_4370 hypothetical protein~SPTR: Putative uncharacterized protein gene gene558 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0533 Sgly_0534 Sgly_0534 Sgly_0534 530861 531421 + hypothetical protein KEGG: amt:Amet_1950 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF3486) gene gene559 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0534 Sgly_0535 Sgly_0535 Sgly_0535 531414 533174 + phage uncharacterized protein InterPro IPR006517~KEGG: dae:Dtox_4228 phage uncharacterized protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Phage uncharacterised protein%2C C-terminal~PFAM: Terminase-like family~TIGRFAM: phage uncharacterized protein (putative large terminase)%2C C-terminal domain gene gene560 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0535 Sgly_0536 Sgly_0536 Sgly_0536 533189 534802 + protein of unknown function DUF935 COGs: COG4383 Mu-like prophage protein gp29~InterPro IPR009279~KEGG: sat:SYN_02303 Mu-like prophage FluMu protein GP29~PFAM: Protein of unknown function DUF935~SPTR: Phage head morphogenesis protein%3B~PFAM: Protein of unknown function (DUF935) gene gene561 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0536 Sgly_0537 Sgly_0537 Sgly_0537 534795 535538 + phage head morphogenesis protein%2C SPP1 gp7 family COGs: COG2369 conserved hypothetical protein homolog of phage Mu protein gp30~InterPro IPR006528~KEGG: dvu:DVU1119 virion morphogenesis protein~PFAM: Phage putative head morphogenesis protein%2C SPP1 gp7~SPTR: Phage putative head morphogenesis protein%2C SPP1 gp7 family%3B~TIGRFAM: Phage putative head morphogenesis protein%2C SPP1 gp7~PFAM: Phage Mu protein F like protein~TIGRFAM: phage putative head morphogenesis protein%2C SPP1 gp7 family gene gene562 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0537 Sgly_0538 Sgly_0538 Sgly_0538 535676 536731 + Mu-like prophage I protein COGs: COG4388 Mu-like prophage I protein~InterPro IPR019295~KEGG: sat:SYN_02300 Mu-like prophage FluMu I protein~PFAM: Mu-like prophage I protein~SPTR: Putative uncharacterized protein%3B~PFAM: Mu-like prophage I protein gene gene563 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0538 Sgly_0539 Sgly_0539 Sgly_0539 536733 537143 + hypothetical protein KEGG: mag:amb1767 hypothetical protein~SPTR: Hypothetical cytosolic protein gene gene564 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0539 Sgly_0540 Sgly_0540 Sgly_0540 537171 538058 + major head subunit protein COGs: COG4397 Mu-like prophage major head subunit gpT~KEGG: ecg:E2348C_2664 predicted major head subunit protein~SPTR: Putative uncharacterized protein%3B~PFAM: Mu-like prophage major head subunit gpT gene gene565 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0540 Sgly_0541 Sgly_0541 Sgly_0541 538073 538522 + protein of unknown function DUF1320 COGs: COG4387 Mu-like prophage protein gp36~InterPro IPR009752~KEGG: sat:SYN_02296 Mu-like prophage FluMu protein GP36~PFAM: Protein of unknown function DUF1320~SPTR: Predicted protein%3B~PFAM: Protein of unknown function (DUF1320) gene gene566 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0541 Sgly_0542 Sgly_0542 Sgly_0542 538523 539023 + phage virion morphogenesis protein COGs: COG5005 Mu-like prophage protein gpG~InterPro IPR006522~KEGG: dde:Dde_3379 phage virion morphogenesis (putative tail completion) protein~SPTR: Phage virion morphogeneis protein%3B~TIGRFAM: Phage virion morphogenesis (putative tail completion) protein~PFAM: Phage virion morphogenesis family~TIGRFAM: phage virion morphogenesis (putative tail completion) protein gene gene567 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0542 Sgly_0543 Sgly_0543 Sgly_0543 539026 539538 + hypothetical protein KEGG: pmz:HMPREF0659_A7225 hypothetical protein~SPTR: Putative uncharacterized protein gene gene568 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0543 Sgly_0544 Sgly_0544 Sgly_0544 539528 539746 + hypothetical protein KEGG: dvu:DVU1112 hypothetical protein~SPTR: Putative uncharacterized protein gene gene569 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0544 Sgly_0545 Sgly_0545 Sgly_0545 539747 541177 + hypothetical protein KEGG: mrb:Mrub_1955 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF2586) gene gene570 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0545 Sgly_0546 Sgly_0546 Sgly_0546 541197 541634 + hypothetical protein KEGG: dvu:DVU1110 hypothetical protein~SPTR: Putative uncharacterized protein gene gene571 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0546 Sgly_0547 Sgly_0547 Sgly_0547 541669 542049 + hypothetical protein KEGG: dvm:DvMF_1296 hypothetical protein~SPTR: Predicted protein gene gene572 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0547 Sgly_0548 Sgly_0548 Sgly_0548 542067 542255 + hypothetical protein SPTR: Putative uncharacterized protein gene gene573 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0548 Sgly_0549 Sgly_0549 Sgly_0549 542272 542511 - hypothetical protein SPTR: Predicted protein gene gene574 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0549 Sgly_0550 Sgly_0550 Sgly_0550 542563 545001 + phage tail tape measure protein%2C TP901 family InterPro IPR010090~KEGG: dde:Dde_0934 phage tail tape measure protein TP901%2C core region~PFAM: Phage tail tape measure protein TP901%2C core region~SPTR: Phage tail tape measure protein core region%3B~TIGRFAM: Phage tail tape measure protein TP901%2C core region~PFAM: Phage-related minor tail protein~TIGRFAM: phage tail tape measure protein%2C TP901 family%2C core region gene gene575 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0550 Sgly_0551 Sgly_0551 Sgly_0551 545004 545597 + hypothetical protein KEGG: dvm:DvMF_1299 hypothetical protein~SPTR: Putative uncharacterized protein gene gene576 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0551 Sgly_0552 Sgly_0552 Sgly_0552 545614 546369 + hypothetical protein KEGG: coc:Coch_0642 hypothetical protein~SPTR: Putative uncharacterized protein gene gene577 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0552 Sgly_0553 Sgly_0553 Sgly_0553 546387 546671 + hypothetical protein KEGG: mma:MM_2821 tryptophan synthase subunit alpha~SPTR: Predicted protein gene gene578 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0553 Sgly_0554 Sgly_0554 Sgly_0554 546671 547084 + baseplate assembly protein%2C putative KEGG: dvu:DVU1103 baseplate assembly protein%2C putative~SPTR: Predicted protein gene gene579 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0554 Sgly_0555 Sgly_0555 Sgly_0555 547077 548207 + hypothetical protein COGs: COG3299 Uncharacterized homolog of phage Mu protein gp47~KEGG: pmx:PERMA_1809 hypothetical protein~SPTR: Baseplate J family protein%3B~PFAM: Baseplate J-like protein gene gene580 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0555 Sgly_0556 Sgly_0556 Sgly_0556 548212 549051 + hypothetical protein KEGG: pmx:PERMA_1821 hypothetical protein~SPTR: Putative uncharacterized protein gene gene581 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0556 Sgly_0557 Sgly_0557 Sgly_0557 549054 549377 + hypothetical protein KEGG: dae:Dtox_4253 hypothetical protein~SPTR: Putative uncharacterized protein gene gene582 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0557 Sgly_0558 Sgly_0558 Sgly_0558 549361 549675 + hypothetical protein KEGG: bbe:BBR47_53600 hypothetical protein~SPTR: Putative uncharacterized protein gene gene583 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0558 Sgly_0559 Sgly_0559 Sgly_0559 549707 549937 + hypothetical protein KEGG: ath:AT4G04695 CPK31%3B ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase~SPTR: Predicted protein gene gene584 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0559 Sgly_0560 Sgly_0560 Sgly_0560 549918 550253 + hypothetical protein KEGG: drm:Dred_1226 hypothetical protein~SPTR: Predicted protein%3B~PFAM: S23 ribosomal protein gene gene585 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0560 Sgly_0561 Sgly_0561 Sgly_0561 550474 551640 + RNA-directed DNA polymerase (Reverse transcriptase) InterPro IPR000477~KEGG: drm:Dred_1227 RNA-directed DNA polymerase (reverse transcriptase)~PFAM: RNA-directed DNA polymerase (reverse transcriptase)~SPTR: RNA-directed DNA polymerase%3B~PFAM: Reverse transcriptase (RNA-dependent DNA polymerase) gene gene586 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0561 Sgly_0562 Sgly_0562 Sgly_0562 551717 553435 + hypothetical protein KEGG: apr:Apre_0859 hypothetical protein~SPTR: Predicted protein gene gene587 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0562 Sgly_0563 Sgly_0563 Sgly_0563 553435 553623 + hypothetical protein KEGG: ecb:100063098 RUN and FYVE domain containing 2~SPTR: Transcription factor gene gene588 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0563 Sgly_0564 Sgly_0564 Sgly_0564 553623 553760 + hypothetical protein SPTR: Conserved domain protein gene gene589 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0564 Sgly_0565 Sgly_0565 Sgly_0565 553962 554420 - pseudogene gene590 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0565 Sgly_0566 Sgly_0566 Sgly_0566 554497 556305 - Radical SAM domain protein COGs: COG1032 Fe-S oxidoreductase~InterPro IPR006158: IPR007197: IPR006638~KEGG: pca:Pcar_1134 putative Fe-S oxidoreductase~PFAM: Radical SAM%3B Cobalamin (vitamin B12)-binding~SMART: Elongator protein 3/MiaB/NifB~SPTR: Putative Fe-S oxidoreductase%3B~PFAM: Radical SAM superfamily%3B B12 binding domain gene gene591 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0566 Sgly_0567 Sgly_0567 Sgly_0567 556370 557503 - methyltransferase FkbM family InterPro IPR006342~KEGG: dhd:Dhaf_4179 methyltransferase FkbM family~SPTR: Methyltransferase FkbM family%3B~TIGRFAM: Methyltransferase FkbM~TIGRFAM: methyltransferase%2C FkbM family gene gene592 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0567 Sgly_0568 Sgly_0568 Sgly_0568 557556 558692 - methyltransferase FkbM family InterPro IPR006342~KEGG: dhd:Dhaf_4174 methyltransferase FkbM family~SPTR: Methyltransferase FkbM family%3B~TIGRFAM: Methyltransferase FkbM~TIGRFAM: methyltransferase%2C FkbM family gene gene593 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0568 Sgly_0569 Sgly_0569 Sgly_0569 558710 560230 - glycosyl transferase family 2 COGs: COG1216 glycosyltransferase~InterPro IPR001173~KEGG: dhd:Dhaf_4180 glycosyl transferase family 2~PFAM: Glycosyl transferase%2C family 2~SPTR: Glycosyl transferase family 2%3B~PFAM: Glycosyl transferase family 2 gene gene594 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0569 Sgly_0570 Sgly_0570 Sgly_0570 560237 561274 - Radical SAM domain protein COGs: COG0535 Fe-S oxidoreductase~InterPro IPR007197~KEGG: cth:Cthe_2556 radical SAM family protein~PFAM: Radical SAM~SPTR: Radical SAM family protein%3B~PFAM: Radical SAM superfamily gene gene595 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0570 Sgly_0571 Sgly_0571 Sgly_0571 561277 562278 - Radical SAM domain protein COGs: COG0535 Fe-S oxidoreductase~InterPro IPR007197~KEGG: cth:Cthe_2552 radical SAM family protein~PFAM: Radical SAM~SPTR: Radical SAM domain protein%3B~PFAM: Radical SAM superfamily gene gene596 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0571 Sgly_0572 Sgly_0572 Sgly_0572 562288 563313 - Radical SAM domain protein COGs: COG0535 Fe-S oxidoreductase~InterPro IPR007197~KEGG: dhd:Dhaf_4175 radical SAM domain protein~PFAM: Radical SAM~SPTR: Radical SAM domain protein%3B~PFAM: Radical SAM superfamily gene gene597 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0572 Sgly_0573 Sgly_0573 Sgly_0573 563361 564698 - glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: cth:Cthe_2554 glycosyl transferase%2C group 1~PFAM: Glycosyl transferase%2C group 1~SPTR: Putative uncharacterized protein%3B~PFAM: Glycosyl transferases group 1 gene gene598 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0573 Sgly_0574 Sgly_0574 Sgly_0574 564779 565879 - CDP-glucose 4%2C6-dehydratase COGs: COG0451 Nucleoside-diphosphate-sugar epimerase~InterPro IPR001509: IPR013445~KEGG: pru:PRU_0435 CDP-D-glucose-4%2C6-dehydratase~PFAM: NAD-dependent epimerase/dehydratase~PRIAM: CDP-glucose 4%2C6-dehydratase~SPTR: CDP-glucose 4%2C6-dehydratase%3B~TIGRFAM: CDP-glucose 4%2C6-dehydratase~PFAM: NAD dependent epimerase/dehydratase family~TIGRFAM: CDP-glucose 4%2C6-dehydratase gene gene599 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0574 Sgly_0575 Sgly_0575 Sgly_0575 566221 566508 + flagellar biosynthesis anti-sigma factor protein FlgM InterPro IPR007412~KEGG: dsy:DSY3030 hypothetical protein~PFAM: Anti-sigma-28 factor%2C FlgM~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Anti-sigma-28 factor%2C FlgM~PFAM: Anti-sigma-28 factor%2C FlgM~TIGRFAM: flagellar biosynthesis anti-sigma factor FlgM gene gene600 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0575 Sgly_0576 Sgly_0576 Sgly_0576 566509 566988 + FlgN family protein InterPro IPR007809~KEGG: dhd:Dhaf_4196 FlgN family protein~PFAM: FlgN~SPTR: Putative uncharacterized protein%3B~PFAM: FlgN protein gene gene601 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0576 Sgly_0577 Sgly_0577 Sgly_0577 567068 568549 + flagellar hook-associated protein FlgK COGs: COG1256 Flagellar hook-associated protein~InterPro IPR001444: IPR010930: IPR002371~KEGG: dsy:DSY3028 hypothetical protein~PFAM: Protein of unknown function DUF1078%2C C-terminal%3B Flagellar basal body rod protein%2C N-terminal~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Flagellar hook-associated protein%2C FlgK~PFAM: Domain of unknown function (DUF1078)%3B Flagella basal body rod protein~TIGRFAM: flagellar hook-associated protein FlgK gene gene602 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0577 Sgly_0578 Sgly_0578 Sgly_0578 568611 569525 + flagellar hook-associated protein 3 COGs: COG1344 Flagellin and related hook-associated protein~InterPro IPR001492: IPR001029: IPR013384~KEGG: dsy:DSY3027 hypothetical protein~PFAM: Flagellin%2C N-terminal%3B Flagellin%2C C-terminal helical region~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Flagellar hook-associated protein 3~PFAM: Bacterial flagellin N-terminal helical region%3B Bacterial flagellin C-terminal helical region~TIGRFAM: flagellar hook-associated protein 3 gene gene603 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0578 Sgly_0579 Sgly_0579 Sgly_0579 569541 570098 + hypothetical protein KEGG: pjd:Pjdr2_5762 hypothetical protein~SPTR: Putative uncharacterized protein%3B~manually curated gene gene604 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0579 Sgly_0580 Sgly_0580 Sgly_0580 570113 570544 + Flagellar assembly factor fliW COGs: COG1699 conserved hypothetical protein~HAMAP: Flagellar assembly factor FliW~InterPro IPR003775~KEGG: gwc:GWCH70_3027 flagellar assembly protein FliW~PFAM: Flagellar assembly factor FliW~SPTR: Flagellar assembly factor fliW%3B~PFAM: FliW protein gene gene605 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0580 Sgly_0581 Sgly_0581 Sgly_0581 570544 570789 + carbon storage regulator%2C CsrA COGs: COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing)~HAMAP: Carbon storage regulator~InterPro IPR003751~KEGG: tpp:TPASS_0657 carbon storage regulator~PFAM: Carbon storage regulator~SPTR: Carbon storage regulator homolog%3B~TIGRFAM: Carbon storage regulator~PFAM: Global regulator protein family~TIGRFAM: carbon storage regulator (csrA) gene gene606 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0581 Sgly_0582 Sgly_0582 Sgly_0582 571018 571656 + pseudogene gene607 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0582 Sgly_0583 Sgly_0583 Sgly_0583 571734 572510 + glucose-1-phosphate cytidylyltransferase COGs: COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)~InterPro IPR005835: IPR013446~KEGG: dhd:Dhaf_4187 glucose-1-phosphate cytidylyltransferase~PFAM: Nucleotidyl transferase~PRIAM: Glucose-1-phosphate cytidylyltransferase~SPTR: Glucose-1-phosphate cytidylyltransferase%3B~TIGRFAM: Glucose-1-phosphate cytidylyltransferase~PFAM: Nucleotidyl transferase~TIGRFAM: glucose-1-phosphate cytidylyltransferase gene gene608 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0583 Sgly_0584 Sgly_0584 Sgly_0584 572532 574844 + glycosyl transferase family 2 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis~InterPro IPR001173: IPR001440: IPR019734~KEGG: aar:Acear_0254 glycosyl transferase family 2~PFAM: Glycosyl transferase%2C family 2%3B Tetratricopeptide TPR-1~SPTR: Glycosyl transferase family 2%3B~PFAM: Tetratricopeptide repeat%3B Glycosyl transferase family 2 gene gene609 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0584 Sgly_0585 Sgly_0585 Sgly_0585 575050 575871 + flagellin domain protein COGs: COG1344 Flagellin and related hook-associated protein~InterPro IPR001492: IPR001029~KEGG: bse:Bsel_1033 flagellin domain protein~PFAM: Flagellin%2C N-terminal%3B Flagellin%2C C-terminal helical region~SPTR: Flagellin%3B~PFAM: Bacterial flagellin N-terminal helical region%3B Bacterial flagellin C-terminal helical region gene gene610 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0585 Sgly_0586 Sgly_0586 Sgly_0586 575980 576351 + flagellar protein FlaG protein COGs: COG1334 Uncharacterized flagellar protein FlaG~InterPro IPR005186~KEGG: dhd:Dhaf_4161 flagellar protein FlaG protein~PFAM: Flagellar protein FlaG protein~SPTR: Flagellar protein FlaG protein%3B~PFAM: FlaG protein gene gene611 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0586 Sgly_0587 Sgly_0587 Sgly_0587 576370 577869 + flagellar hook-associated 2 domain-containing protein COGs: COG1345 Flagellar capping protein~InterPro IPR003481: IPR010810: IPR010809~KEGG: adg:Adeg_0254 flagellar hook-associated 2 domain protein~PFAM: Flagellar hook-associated 2%2C C-terminal%3B Flagellar hook-associated protein 2%2C N-terminal%3B Flagellin hook%2C IN motif~SPTR: Flagellar hook-associated 2 domain protein%3B~PFAM: Flagellar hook-associated protein 2 C-terminus gene gene612 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0587 Sgly_0588 Sgly_0588 Sgly_0588 578026 578436 + flagellar protein FliS COGs: COG1516 Flagellin-specific chaperone FliS~InterPro IPR003713~KEGG: aar:Acear_0257 Hpt protein~PFAM: Flagellar protein FliS~SPTR: Hpt protein%3B~TIGRFAM: Flagellar protein FliS~PFAM: Flagellar protein FliS~TIGRFAM: flagellar biosynthetic protein FliS gene gene613 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0588 Sgly_0589 Sgly_0589 Sgly_0589 578436 578930 + hypothetical protein KEGG: tva:TVAG_458090 viral A-type inclusion protein~SPTR: Viral A-type inclusion protein%2C putative gene gene614 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0589 Sgly_0590 Sgly_0590 Sgly_0590 579176 581437 + CheA signal transduction histidine kinase COGs: COG0643 Chemotaxis protein histidine kinase and related kinase~InterPro IPR008207: IPR010808: IPR004105: IPR003594: IPR 002545~KEGG: dhd:Dhaf_4155 CheA signal transduction histidine kinase~PFAM: CheW-like protein%3B ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C P2 response regulator-binding%3B Signal transduction histidine kinase%2C phosphotransfer (Hpt) domain%3B Signal transduction histidine kinase%2C subgroup%2C homodimeric~SMART: CheW-like protein%3B Signal transduction histidine kinase%2C phosphotransfer (Hpt) domain%3B ATPase-like%2C ATP-binding domain~SPTR: CheA signal transduction histidine kinase%3B~PFAM: CheW-like domain%3B P2 response regulator binding domain%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B Signal transducing histidine kinase%2C homodimeric domain%3B Hpt domain gene gene615 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0590 Sgly_0591 Sgly_0591 Sgly_0591 581519 581965 + CheW protein COGs: COG0835 Chemotaxis signal transduction protein~InterPro IPR002545~KEGG: dhd:Dhaf_4154 CheW protein~PFAM: CheW-like protein~SMART: CheW-like protein~SPTR: Putative uncharacterized protein%3B~PFAM: CheW-like domain gene gene616 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0591 Sgly_0592 Sgly_0592 Sgly_0592 581949 583085 + response regulator receiver modulated CheB methylesterase COGs: COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain~HAMAP: Chemotaxis response regulator protein-glutamate methylesterase~InterPro IPR001789: IPR000673~KEGG: dsy:DSY2992 hypothetical protein~PFAM: Signal transduction response regulator%2C chemotaxis%2C protein-glutamate methylesterase%3B Signal transduction response regulator%2C receiver domain~SMART: Signal transduction response regulator%2C receiver domain~SPTR: Chemotaxis response regulator protein-glutamate methylesterase%3B~PFAM: CheB methylesterase%3B Response regulator receiver domain gene gene617 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0592 Sgly_0593 Sgly_0593 Sgly_0593 583088 583570 + flagellar basal-body rod protein FlgC COGs: COG1558 Flagellar basal body rod protein~InterPro IPR001444: IPR010930: IPR006299~KEGG: dhd:Dhaf_4152 flagellar basal-body rod protein FlgC~PFAM: Protein of unknown function DUF1078%2C C-terminal%3B Flagellar basal body rod protein%2C N-terminal~SPTR: Flagellar basal-body rod protein FlgC%3B~TIGRFAM: Flagellar basal-body rod protein FlgC~PFAM: Domain of unknown function (DUF1078)%3B Flagella basal body rod protein~TIGRFAM: flagellar basal-body rod protein FlgC gene gene618 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0593 Sgly_0594 Sgly_0594 Sgly_0594 583577 583900 + Flagellar hook-basal body complex protein fliE COGs: COG1677 Flagellar hook-basal body protein~HAMAP: Flagellar hook-basal body complex protein FliE~InterPro IPR001624~KEGG: dsy:DSY2990 hypothetical protein~PFAM: Flagellar hook-basal body complex protein FliE~SPTR: Flagellar hook-basal body complex protein fliE%3B~TIGRFAM: Flagellar hook-basal body complex protein FliE~PFAM: Flagellar hook-basal body complex protein FliE~TIGRFAM: flagellar hook-basal body complex protein FliE gene gene619 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0594 Sgly_0595 Sgly_0595 Sgly_0595 583921 585525 + flagellar M-ring protein FliF COGs: COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein~InterPro IPR006182: IPR013556: IPR000067~KEGG: dsy:DSY2989 hypothetical protein~PFAM: Secretory protein YscJ/FliF%3B Flagellar M-ring C-terminal~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Flagellar FliF M-ring protein~PFAM: Secretory protein of YscJ/FliF family%3B Flagellar M-ring protein C-terminal~TIGRFAM: flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) gene gene620 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0595 Sgly_0596 Sgly_0596 Sgly_0596 585526 586527 + flagellar motor switch protein FliG COGs: COG1536 Flagellar motor switch protein~InterPro IPR000090~KEGG: dhd:Dhaf_4149 flagellar motor switch protein G~PFAM: Flagellar motor switch protein FliG~SPTR: Flagellar motor switch protein FliG%3B~TIGRFAM: Flagellar motor switch protein FliG~PFAM: FliG C-terminal domain~TIGRFAM: flagellar motor switch protein FliG gene gene621 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0596 Sgly_0597 Sgly_0597 Sgly_0597 586511 587317 + Flagellar assembly protein FliH/Type III secretion system HrpE InterPro IPR018035~KEGG: dhd:Dhaf_4148 flagellar assembly protein FliH~PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE~SPTR: Flagellar assembly protein FliH%3B~PFAM: Flagellar assembly protein FliH gene gene622 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0597 Sgly_0598 Sgly_0598 Sgly_0598 587289 588602 + type III secretion system ATPase%2C FliI/YscN COGs: COG1157 Flagellar biosynthesis/type III secretory pathway ATPase~InterPro IPR004100: IPR000194: IPR005714: IPR003593~KEGG: dsy:DSY2986 hypothetical protein~PFAM: ATPase%2C F1/V1/A1 complex%2C alpha/beta subunit%2C nucleotide-binding domain%3B ATPase%2C F1/V1/A1 complex%2C alpha/beta subunit%2C N-terminal~PRIAM: H(+)-transporting two-sector ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~TIGRFAM: flagellar protein export ATPase FliI%3B ATPase%2C type III secretion system%2C FliI/YscN~PFAM: ATP synthase alpha/beta family%2C beta-barrel domain%3B ATP synthase alpha/beta family%2C nucleotide-binding domain~TIGRFAM: ATPase FliI/YscN family%3B flagellar protein export ATPase FliI gene gene623 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0598 Sgly_0599 Sgly_0599 Sgly_0599 588602 589051 + hypothetical protein KEGG: dsy:DSY2985 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Flagellar FliJ protein~TIGRFAM: flagellar export protein FliJ gene gene624 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0599 Sgly_0600 Sgly_0600 Sgly_0600 589048 589254 + flagellar FlbD family protein COGs: COG1582 Uncharacterized protein possibly involved in motility~InterPro IPR009384~KEGG: dhd:Dhaf_4145 flagellar FlbD family protein~PFAM: Flagellar~SPTR: Putative uncharacterized protein%3B~PFAM: Flagellar protein (FlbD) gene gene625 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0600 Sgly_0601 Sgly_0601 Sgly_0601 589251 589688 + flagellar basal body-associated protein FliL InterPro IPR005503~KEGG: dhd:Dhaf_4144 flagellar basal body-associated protein FliL~PFAM: Flagellar basal body-associated protein FliL~SPTR: Flagellar basal body-associated protein FliL%3B~PFAM: Flagellar basal body-associated protein FliL gene gene626 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0601 Sgly_0602 Sgly_0602 Sgly_0602 589761 590759 + flagellar motor switch protein FliM COGs: COG1868 Flagellar motor switch protein~InterPro IPR001689: IPR001543~KEGG: dhd:Dhaf_4143 flagellar motor switch protein FliM~PFAM: Flagellar motor switch protein FliM%3B Surface presentation of antigen (SpoA)~SPTR: Flagellar motor switch protein FliM%3B~TIGRFAM: Flagellar motor switch protein FliM~PFAM: Surface presentation of antigens (SPOA)%3B Flagellar motor switch protein FliM~TIGRFAM: flagellar motor switch protein FliM gene gene627 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0602 Sgly_0603 Sgly_0603 Sgly_0603 590749 591870 + CheC%2C inhibitor of MCP methylation COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation~InterPro IPR007597: IPR001543: IPR012826~KEGG: dhd:Dhaf_4142 CheC%2C inhibitor of MCP methylation / FliN fusion protein~PFAM: Surface presentation of antigen (SpoA)%3B CheC-like protein~SPTR: CheC%2C inhibitor of MCP methylation / FliN fusion protein%3B~TIGRFAM: Flagellar motor switch FliN~PFAM: Surface presentation of antigens (SPOA)%3B CheC-like family~TIGRFAM: flagellar motor switch protein FliM%3B flagellar motor switch protein FliN gene gene628 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0603 Sgly_0604 Sgly_0604 Sgly_0604 591886 592248 + response regulator receiver protein COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains~InterPro IPR001789~KEGG: dhd:Dhaf_4140 response regulator receiver protein~PFAM: Signal transduction response regulator%2C receiver domain~SMART: Signal transduction response regulator%2C receiver domain~SPTR: Putative uncharacterized protein%3B~PFAM: Response regulator receiver domain gene gene629 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0604 Sgly_0605 Sgly_0605 Sgly_0605 592250 592717 + hypothetical protein KEGG: dsy:DSY2979 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Flagellar biosynthesis protein%2C FliO~TIGRFAM: flagellar biosynthetic protein FliO gene gene630 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0605 Sgly_0606 Sgly_0606 Sgly_0606 592714 593466 + flagellar biosynthetic protein FliP COGs: COG1338 Flagellar biosynthesis pathway component FliP~InterPro IPR005838: IPR005837~KEGG: dhd:Dhaf_4138 flagellar biosynthesis protein FliP~PFAM: Type III secretion system inner membrane P protein~SPTR: Flagellar biosynthetic protein FliP%3B~TIGRFAM: Flagellar transport protein FliP~PFAM: FliP family~TIGRFAM: flagellar biosynthetic protein FliP gene gene631 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0606 Sgly_0607 Sgly_0607 Sgly_0607 593494 593766 + flagellar biosynthetic protein FliQ COGs: COG1987 Flagellar biosynthesis pathway component FliQ~InterPro IPR002191: IPR006305~KEGG: dsy:DSY2977 hypothetical protein~PFAM: Bacterial export protein FliQ%2C family 3~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Flagellar biosynthesis protein FliQ~PFAM: Bacterial export proteins%2C family 3~TIGRFAM: flagellar biosynthetic protein FliQ gene gene632 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0607 Sgly_0608 Sgly_0608 Sgly_0608 593781 594560 + flagellar biosynthetic protein FliR COGs: COG1684 Flagellar biosynthesis pathway component FliR~InterPro IPR002010: IPR006303~KEGG: dhd:Dhaf_4136 flagellar biosynthetic protein FliR~PFAM: Type III secretion system inner membrane R protein~SPTR: Flagellar biosynthetic protein fliR%3B~TIGRFAM: Flagellar biosynthesis protein FliR~PFAM: Bacterial export proteins%2C family 1~TIGRFAM: flagellar biosynthetic protein FliR gene gene633 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0608 Sgly_0609 Sgly_0609 Sgly_0609 594548 595615 + flagellar biosynthetic protein FlhB COGs: COG1377 Flagellar biosynthesis pathway component FlhB~InterPro IPR006135: IPR006136~KEGG: dhd:Dhaf_4135 flagellar biosynthetic protein FlhB~PFAM: Type III secretion exporter~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Flagellar biosynthetic protein FlhB~manually curated~PFAM: FlhB HrpN YscU SpaS Family~TIGRFAM: flagellar biosynthetic protein FlhB gene gene634 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0609 Sgly_0610 Sgly_0610 Sgly_0610 595653 597731 + flagellar biosynthesis protein FlhA COGs: COG1298 Flagellar biosynthesis pathway component FlhA~InterPro IPR001712: IPR006301~KEGG: dhd:Dhaf_4134 flagellar biosynthesis protein FlhA~PFAM: Type III secretion system FHIPEP~SPTR: Flagellar biosynthesis protein FlhA%3B~TIGRFAM: Flagellar biosynthesis protein FlhA~PFAM: FHIPEP family~TIGRFAM: flagellar biosynthesis protein FlhA gene gene635 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0610 Sgly_0611 Sgly_0611 Sgly_0611 597721 598911 + flagellar biosynthetic protein FlhF COGs: COG1419 Flagellar GTP-binding protein~InterPro IPR000897: IPR020006: IPR003593~KEGG: dhd:Dhaf_4133 GTP-binding signal recognition particle SRP54 G-domain protein~PFAM: Signal recognition particle%2C SRP54 subunit%2C GTPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Signal-recognition particle (SRP)-type GTPase~PFAM: SRP54-type protein%2C GTPase domain~TIGRFAM: flagellar biosynthetic protein FlhF gene gene636 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0611 Sgly_0612 Sgly_0612 Sgly_0612 598916 599779 + hypothetical protein COGs: COG0455 ATPase involved in chromosome partitioning~KEGG: dsy:DSY2972 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain gene gene637 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0612 Sgly_0613 Sgly_0613 Sgly_0613 599799 600440 + type IV pilus assembly PilZ COGs: COG5581 glycosyltransferase~InterPro IPR009875~KEGG: dhd:Dhaf_4131 type IV pilus assembly PilZ~PFAM: Type IV pilus assembly PilZ~SPTR: Type IV pilus assembly PilZ%3B~PFAM: PilZ domain gene gene638 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0613 Sgly_0614 Sgly_0614 Sgly_0614 600442 601038 + CheC%2C inhibitor of MCP methylation COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation~InterPro IPR007597~KEGG: dhd:Dhaf_4130 CheC%2C inhibitor of MCP methylation~PFAM: CheC-like protein~SPTR: Putative uncharacterized protein%3B~PFAM: CheC-like family gene gene639 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0614 Sgly_0615 Sgly_0615 Sgly_0615 601035 601514 + CheD COGs: COG1871 Chemotaxis protein%3B stimulates methylation of MCP protein~HAMAP: Chemoreceptor glutamine deamidase cheD~InterPro IPR005659~KEGG: dhd:Dhaf_4129 CheD~PFAM: Chemoreceptor glutamine deamidase cheD~PRIAM: Protein-glutamine glutaminase~SPTR: Probable chemoreceptor glutamine deamidase CheD%3B~PFAM: CheD gene gene640 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0615 Sgly_0616 Sgly_0616 Sgly_0616 601514 601918 + hypothetical protein KEGG: dsy:DSY2968 hypothetical protein~SPTR: Putative uncharacterized protein gene gene641 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0616 Sgly_0617 Sgly_0617 Sgly_0617 601896 602660 + RNA polymerase%2C sigma 28 subunit%2C SigD/FliA/WhiG COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit~InterPro IPR007627: IPR007624: IPR007630: IPR014284: IPR 012845~KEGG: dhd:Dhaf_4127 RNA polymerase%2C sigma 28 subunit%2C FliA/WhiG~PFAM: RNA polymerase sigma-70 region 4%3B RNA polymerase sigma-70 region 2%3B RNA polymerase sigma-70 region 3~SPTR: RNA polymerase sigma factor%3B~TIGRFAM: RNA polymerase sigma factor%2C FliA/WhiG%3B RNA polymerase sigma-70~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 3%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C FliA/WhiG family%3B RNA polymerase sigma factor%2C sigma-70 family gene gene642 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0617 Sgly_0618 Sgly_0618 Sgly_0618 602731 604104 + Flagellar hook-length control protein InterPro IPR021136~KEGG: dhd:Dhaf_4126 flagellar hook-length control protein~PFAM: Flagellar hook-length control protein-like%2C C-terminal domain~SPTR: Flagellar hook-length control protein%3B~PFAM: Flagellar hook-length control protein FliK gene gene643 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0618 Sgly_0619 Sgly_0619 Sgly_0619 604131 604565 + flagellar hook capping protein COGs: COG1843 Flagellar hook capping protein~InterPro IPR005648~KEGG: tjr:TherJR_1535 flagellar hook capping protein~PFAM: Flagellar hook capping protein~SPTR: Flagellar hook capping protein%3B~PFAM: Flagellar hook capping protein gene gene644 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0619 Sgly_0620 Sgly_0620 Sgly_0620 604653 605552 + fagellar hook-basal body protein COGs: COG4786 Flagellar basal body rod protein~InterPro IPR001444: IPR010930: IPR020013~KEGG: dsy:DSY2964 hypothetical protein~PFAM: Protein of unknown function DUF1078%2C C-terminal%3B Flagellar basal body rod protein%2C N-terminal~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Fagellar hook-basal body protein%2C FlgE/F/G~PFAM: Domain of unknown function (DUF1078)%3B Flagella basal body rod protein~TIGRFAM: fagellar hook-basal body proteins gene gene645 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0620 Sgly_0621 Sgly_0621 Sgly_0621 605647 606417 + fagellar hook-basal body protein COGs: COG4786 Flagellar basal body rod protein~InterPro IPR001444: IPR010930: IPR020013~KEGG: ddf:DEFDS_2152 flagellar basal-body rod protein FlgG~PFAM: Flagellar basal body rod protein%2C N-terminal%3B Protein of unknown function DUF1078%2C C-terminal~SPTR: Flagellar basal-body rod protein FlgG%3B~TIGRFAM: Fagellar hook-basal body protein%2C FlgE/F/G~PFAM: Domain of unknown function (DUF1078)%3B Flagella basal body rod protein~TIGRFAM: fagellar hook-basal body proteins gene gene646 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0621 Sgly_0622 Sgly_0622 Sgly_0622 606421 606819 + flagellar basal-body rod protein FlgB COGs: COG1815 Flagellar basal body protein~InterPro IPR001444: IPR006300~KEGG: dhd:Dhaf_4122 flagellar basal-body rod protein FlgB~PFAM: Flagellar basal body rod protein%2C N-terminal~SPTR: Flagellar basal-body rod protein FlgB%3B~TIGRFAM: Flagellar basal-body rod protein FlgB~PFAM: Flagella basal body rod protein~TIGRFAM: flagellar basal-body rod protein FlgB gene gene647 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0622 Sgly_0623 Sgly_0623 Sgly_0623 606851 607624 + fagellar hook-basal body protein COGs: COG4786 Flagellar basal body rod protein~InterPro IPR010930: IPR020013~KEGG: dsy:DSY2961 hypothetical protein~PFAM: Protein of unknown function DUF1078%2C C-terminal~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Fagellar hook-basal body protein%2C FlgE/F/G~PFAM: Domain of unknown function (DUF1078)~TIGRFAM: fagellar hook-basal body proteins gene gene648 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0623 Sgly_0624 Sgly_0624 Sgly_0624 607665 608094 + pseudogene gene649 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0624 Sgly_0625 Sgly_0625 Sgly_0625 608159 608611 + hypothetical protein KEGG: pme:NATL1_10021 hypothetical protein~SPTR: Predicted membrane protein gene gene650 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0625 Sgly_0626 Sgly_0626 Sgly_0626 608777 609400 + Negative regulator of genetic competence COGs: COG4862 Negative regulator of genetic competence sporulation and motility~InterPro IPR008681~KEGG: dhd:Dhaf_4102 negative regulator of genetic competence~PFAM: Negative regulator of genetic competence~SPTR: Negative regulator of genetic competence%3B~PFAM: Negative regulator of genetic competence (MecA) gene gene651 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0626 Sgly_0627 Sgly_0627 Sgly_0627 609492 609686 - hypothetical protein KEGG: cby:CLM_2558 transcriptional regulator%2C AbrB family~SPTR: Transcriptional regulator%2C AbrB family gene gene652 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0627 Sgly_0628 Sgly_0628 Sgly_0628 609995 611041 + cell envelope-related transcriptional attenuator COGs: COG1316 Transcriptional regulator~InterPro IPR004474~KEGG: dsy:DSY2942 hypothetical protein~PFAM: Cell envelope-related transcriptional attenuator~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Cell envelope-related transcriptional attenuator~PFAM: Cell envelope-related transcriptional attenuator domain~TIGRFAM: cell envelope-related function transcriptional attenuator common domain gene gene653 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0628 Sgly_0629 Sgly_0629 Sgly_0629 611134 613068 + protein of unknown function DUF342 COGs: COG1315 polymerase most protein contain PALM domain HD hydrolase domain and Zn-ribbon domain~InterPro IPR005646~KEGG: dhd:Dhaf_4099 protein of unknown function DUF342~PFAM: Protein of unknown function DUF342~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF342) gene gene654 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0629 Sgly_0630 Sgly_0630 Sgly_0630 613239 614738 + peptidase U62 modulator of DNA gyrase COGs: COG0312 Zn-dependent protease and their inactivated homologs~InterPro IPR002510~KEGG: dhd:Dhaf_4088 peptidase U62 modulator of DNA gyrase~PFAM: Peptidase U62%2C modulator of DNA gyrase~SPTR: Peptidase U62 modulator of DNA gyrase%3B~PFAM: Putative modulator of DNA gyrase gene gene655 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0630 Sgly_0631 Sgly_0631 Sgly_0631 614735 616060 + peptidase U62 modulator of DNA gyrase COGs: COG0312 Zn-dependent protease and their inactivated homologs~InterPro IPR002510~KEGG: dsy:DSY2930 hypothetical protein~PFAM: Peptidase U62%2C modulator of DNA gyrase~SPTR: Putative uncharacterized protein%3B~PFAM: Putative modulator of DNA gyrase gene gene656 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0631 Sgly_0632 Sgly_0632 Sgly_0632 616092 616850 + histidinol phosphate phosphatase HisJ family COGs: COG1387 Histidinol phosphatase and related hydrolase of the PHP family~InterPro IPR004013: IPR010140~KEGG: dhd:Dhaf_4086 histidinol phosphate phosphatase HisJ family~PFAM: PHP%2C C-terminal~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Histidinol phosphate phosphatase%2C HisJ~PFAM: PHP domain~TIGRFAM: histidinol phosphate phosphatase HisJ family gene gene657 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0632 Sgly_0633 Sgly_0633 Sgly_0633 616990 617151 + hypothetical protein KEGG: dhd:Dhaf_4080 hypothetical protein~SPTR: Putative uncharacterized protein gene gene658 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0633 Sgly_0634 Sgly_0634 Sgly_0634 617304 617474 + ferridoxin KEGG: sat:SYN_03059 ferridoxin~SPTR: Putative uncharacterized protein%3B~PFAM: 4Fe-4S binding domain gene gene659 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0634 Sgly_0635 Sgly_0635 Sgly_0635 617671 618087 + ferric uptake regulator%2C Fur family COGs: COG0735 Fe2+/Zn2+ uptake regulation protein~InterPro IPR002481~KEGG: dhd:Dhaf_4078 ferric uptake regulator%2C Fur family~PFAM: Ferric-uptake regulator~SPTR: Putative uncharacterized protein%3B~PFAM: Ferric uptake regulator family gene gene660 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0635 Sgly_0636 Sgly_0636 Sgly_0636 618149 620272 + beta-galactosidase/beta-glucuronidase-like protein COGs: COG3250 Beta-galactosidase/beta-glucuronidase~KEGG: dhd:Dhaf_4077 beta-galactosidase/beta-glucuronidase-like protein~SPTR: Putative uncharacterized protein%3B~PFAM: domain gene gene661 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0636 Sgly_0637 Sgly_0637 Sgly_0637 620381 620578 + Domain of unknown function DUF1858 InterPro IPR015077~KEGG: dhd:Dhaf_4076 domain of unknown function DUF1858~PFAM: Domain of unknown function DUF1858~SPTR: Putative uncharacterized protein%3B~PFAM: Domain of unknown function (DUF1858) gene gene662 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0637 Sgly_0638 Sgly_0638 Sgly_0638 620721 621995 + Patatin COGs: COG1752 esterase of the alpha-beta hydrolase superfamily~InterPro IPR002641~KEGG: tpd:Teth39_0705 patatin~PFAM: Patatin~SPTR: Patatin%3B~PFAM: Patatin-like phospholipase gene gene663 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0638 Sgly_0639 Sgly_0639 Sgly_0639 622150 622584 + Protein mraZ COGs: COG2001 conserved hypothetical protein~HAMAP: MraZ~InterPro IPR020603: IPR003444~KEGG: dsy:DSY2916 cell division protein MraZ~PFAM: MraZ domain~SPTR: Protein mraZ%3B~TIGRFAM: MraZ~PFAM: MraZ protein~TIGRFAM: mraZ protein gene gene664 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0639 Sgly_0640 Sgly_0640 Sgly_0640 622602 623534 + Ribosomal RNA small subunit methyltransferase H COGs: COG0275 S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis~HAMAP: S-adenosyl-L-methionine-dependent methyltransferase%2C MraW~InterPro IPR002903~KEGG: dhd:Dhaf_4071 S-adenosyl-methyltransferase MraW~PFAM: S-adenosyl-L-methionine-dependent methyltransferase%2C MraW~SPTR: Ribosomal RNA small subunit methyltransferase H%3B~TIGRFAM: S-adenosyl-L-methionine-dependent methyltransferase%2C MraW~PFAM: MraW methylase family~TIGRFAM: S-adenosyl-methyltransferase MraW gene gene665 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0640 Sgly_0641 Sgly_0641 Sgly_0641 623563 624087 + Septum formation initiator InterPro IPR007060~KEGG: dhd:Dhaf_4070 septum formation initiator~PFAM: Septum formation initiator~SPTR: Septum formation initiator%3B~PFAM: Septum formation initiator~TIGRFAM: cell division protein FtsL gene gene666 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0641 Sgly_0642 Sgly_0642 Sgly_0642 624130 626178 + stage V sporulation protein D COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2~InterPro IPR005543: IPR005311: IPR001460: IPR011927~KEGG: dhd:Dhaf_4069 stage V sporulation protein D~PFAM: Penicillin-binding protein%2C transpeptidase%3B Penicillin-binding protein%2C dimerisation domain%3B PASTA~PRIAM: Peptidoglycan glycosyltransferase~SMART: PASTA~SPTR: Stage V sporulation protein D%3B~TIGRFAM: Stage V sporulation protein D~PFAM: Penicillin binding protein transpeptidase domain%3B Penicillin-binding Protein dimerisation domain%3B PASTA domain~TIGRFAM: stage V sporulation protein D gene gene667 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0642 Sgly_0643 Sgly_0643 Sgly_0643 626265 627749 + UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C6-diaminopimelate ligase COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase~HAMAP:UDP-N-acetylmuramoylalanyl-D-glutamate-2%2C6-di aminopimelateligase~InterPro IPR000713: IPR013221: IPR004101: IPR005761~KEGG: dhd:Dhaf_4068 UDP-N-acetylmuramyl-tripeptide synthetase~PFAM: Mur ligase%2C central%3B Mur ligase%2C N-terminal%3B Mur ligase%2C C-terminal~PRIAM:UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C 6-diaminopimelateligase~SPTR: UDP-N-acetylmuramyl-tripeptide synthetase%3B~TIGRFAM:UDP-N-acetylmuramoylalanyl-D-glutamate-2%2C6- diaminopimelateligase~manually curated~PFAM: Mur ligase family%2C glutamate ligase domain%3B Mur ligase family%2C catalytic domain%3B Mur ligase middle domain~TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase gene gene668 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0643 Sgly_0644 Sgly_0644 Sgly_0644 627739 629154 + UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase COGs: COG0770 UDP-N-acetylmuramyl pentapeptide synthase~InterPro IPR000713: IPR013221: IPR004101: IPR005863~KEGG: dhd:Dhaf_4067 UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-diaminopimelate/ D-alanyl-D -alanyl ligase~PFAM: Mur ligase%2C central%3B Mur ligase%2C N-terminal%3B Mur ligase%2C C-terminal~PRIAM:UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-a lanineligase~SPTR:UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-al anineligase%3B~TIGRFAM: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase~PFAM: Mur ligase family%2C glutamate ligase domain%3B Mur ligase family%2C catalytic domain%3B Mur ligase middle domain~TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase gene gene669 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0644 Sgly_0645 Sgly_0645 Sgly_0645 629169 630170 + Phospho-N-acetylmuramoyl-pentapeptide-transferase COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase~HAMAP: Phospho-N-acetylmuramoyl-pentapeptide transferase~InterPro IPR018480: IPR018481: IPR003524~KEGG: dhd:Dhaf_4066 phospho-N-acetylmuramoyl-pentapeptide-transferase~PFAM: Glycosyl transferase%2C family 4%2C conserved region%3B Phospho-N-acetylmuramoyl-pentapeptide transferase%2C conserved site~SPTR:Phospho-N-acetylmuramoyl-pentapeptide-transfer ase%3B~TIGRFAM: Phospho-N-acetylmuramoyl-pentapeptide transferase~PFAM: Glycosyl transferase family 4~TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase gene gene670 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0645 Sgly_0646 Sgly_0646 Sgly_0646 630197 631561 + UDP-N-acetylmuramoylalanine--D-glutamate ligase COGs: COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase~HAMAP: UDP-N-acetylmuramoylalanine-D-glutamate ligase~InterPro IPR013221: IPR004101: IPR005762~KEGG: dhd:Dhaf_4065 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase~PFAM: Mur ligase%2C central%3B Mur ligase%2C C-terminal~SPTR: UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B~TIGRFAM: UDP-N-acetylmuramoylalanine-D-glutamate ligase~PFAM: Mur ligase family%2C glutamate ligase domain%3B Mur ligase middle domain~TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase gene gene671 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0646 Sgly_0647 Sgly_0647 Sgly_0647 631580 632686 + cell division-specific peptidoglycan biosynthesis regulator FtsW COGs: COG0772 Bacterial cell division membrane protein~InterPro IPR001182: IPR013437~KEGG: dsy:DSY2908 hypothetical protein~PFAM: Cell cycle protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Cell division protein FtsW~PFAM: Cell cycle protein~TIGRFAM: rod shape-determining protein RodA%3B stage V sporulation protein E%3B cell division protein FtsW gene gene672 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0647 Sgly_0648 Sgly_0648 Sgly_0648 632698 633807 + UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase COGs: COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase~HAMAP: N-acetylglucosaminyltransferase%2C MurG~InterPro IPR004276: IPR007235: IPR006009~KEGG: dsy:DSY2907 hypothetical protein~PFAM: Glycosyl transferase%2C family 28%3B Glycosyl transferase%2C family 28%2C C-terminal~SPTR:UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B~TIGRFAM: N-acetylglucosaminyltransferase%2C MurG~PFAM: Glycosyltransferase family 28 C-terminal domain%3B Glycosyltransferase family 28 N-terminal domain~TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase gene gene673 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0648 Sgly_0649 Sgly_0649 Sgly_0649 633860 634747 + UDP-N-acetylmuramate dehydrogenase COGs: COG0812 UDP-N-acetylmuramate dehydrogenase~HAMAP: UDP-N-acetylenolpyruvoylglucosamine reductase~InterPro IPR006094: IPR011601: IPR003170~KEGG: dhd:Dhaf_4061 UDP-N-acetylenolpyruvoylglucosamine reductase~PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase%2C C-terminal%3B FAD linked oxidase%2C N-terminal~PRIAM: UDP-N-acetylmuramate dehydrogenase~SPTR: UDP-N-acetylenolpyruvoylglucosamine reductase%3B~TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase~PFAM: FAD binding domain%3B UDP-N-acetylenolpyruvoylglucosamine reductase%2C C-terminal domain~TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase gene gene674 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0649 Sgly_0650 Sgly_0650 Sgly_0650 634766 636031 + UDP-N-acetylglucosamine 1-carboxyvinyltransferase COGs: COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase~HAMAP: UDP-N-acetylglucosamine 1-carboxyvinyltransferase~InterPro IPR001986: IPR005750~KEGG: dhd:Dhaf_4060 UDP-N-acetylglucosamine 1-carboxyvinyltransferase~PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase%2C core~PRIAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase~SPTR: UDP-N-acetylglucosamine 1-carboxyvinyltransferase%3B~TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase~PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)~TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase gene gene675 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0650 Sgly_0651 Sgly_0651 Sgly_0651 636069 636788 + Polypeptide-transport-associated domain protein FtsQ-type COGs: COG1589 Cell division septal protein~InterPro IPR013685: IPR005548~KEGG: dhd:Dhaf_4059 polypeptide-transport-associated domain protein FtsQ-type~PFAM: Polypeptide-transport-associated%2C FtsQ-type%3B Cell division protein FtsQ~SPTR: Polypeptide-transport-associated domain protein FtsQ-type%3B~PFAM: Cell division protein FtsQ%3B POTRA domain%2C FtsQ-type gene gene676 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0651 Sgly_0652 Sgly_0652 Sgly_0652 636809 637138 + protein of unknown function DUF1290 COGs: COG3856 conserved hypothetical protein (small basic protein)~InterPro IPR009709~KEGG: dhd:Dhaf_4058 protein of unknown function DUF1290~PFAM: Protein of unknown function DUF1290~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1290) gene gene677 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0652 Sgly_0653 Sgly_0653 Sgly_0653 637344 638405 + cell division protein FtsZ COGs: COG0206 Cell division GTPase~InterPro IPR003008: IPR018316: IPR000158~KEGG: dhd:Dhaf_4057 cell division protein FtsZ~PFAM: Tubulin/FtsZ%2C GTPase domain%3B Tubulin/FtsZ%2C 2-layer sandwich domain~SPTR: Cell division protein ftsZ%3B~TIGRFAM: Cell division protein FtsZ%2C N-terminal~PFAM: Tubulin/FtsZ family%2C GTPase domain%3B FtsZ family%2C C-terminal domain~TIGRFAM: cell division protein FtsZ gene gene678 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0653 Sgly_0654 Sgly_0654 Sgly_0654 638797 639702 + peptidase U4 sporulation factor SpoIIGA InterPro IPR005081~KEGG: dsy:DSY2896 hypothetical protein~PFAM: Peptidase U4%2C sporulation factor SpoIIGA~SPTR: Putative uncharacterized protein%3B~PFAM: Sporulation factor SpoIIGA~TIGRFAM: sigma-E processing peptidase SpoIIGA gene gene679 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0654 Sgly_0655 Sgly_0655 Sgly_0655 639699 640451 + RNA polymerase%2C sigma 29 subunit%2C SigE COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit~InterPro IPR007627: IPR007630: IPR014200: IPR014284~KEGG: dhd:Dhaf_4054 sporulation sigma factor SigE~PFAM: RNA polymerase sigma-70 region 4%3B RNA polymerase sigma-70 region 2~SPTR: RNA polymerase sigma factor%3B~TIGRFAM: RNA polymerase sigma-E type%3B RNA polymerase sigma-70~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family%3B RNA polymerase sigma-E factor gene gene680 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0655 Sgly_0656 Sgly_0656 Sgly_0656 640509 641282 + RNA polymerase%2C sigma subunit%2C RpsG/SigG COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit~InterPro IPR007627: IPR007624: IPR007630: IPR014212: IPR 014322: IPR014284~KEGG: dhd:Dhaf_4053 sporulation sigma factor SigG~PFAM: RNA polymerase sigma-70 region 2%3B RNA polymerase sigma-70 region 3%3B RNA polymerase sigma-70 region 4~SPTR: RNA polymerase sigma factor%3B~TIGRFAM: RNA polymerase sigma-G type%3B RNA polymerase sigma-B/F/G type%3B RNA polymerase sigma-70~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 3%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma-G factor%3B RNA polymerase sigma factor%2C sigma-70 family%3B RNA polymerase sigma-70 factor%2C sigma-B/F/G subfamily gene gene681 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0656 Sgly_0657 Sgly_0657 Sgly_0657 641327 641584 + sporulation protein%2C YlmC/YmxH family InterPro IPR007903: IPR014238~KEGG: dsy:DSY2893 hypothetical protein~PFAM: PRC-barrel~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Sporulation protein YlmC/YmxH~PFAM: PRC-barrel domain~TIGRFAM: sporulation protein%2C YlmC/YmxH family gene gene682 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0657 Sgly_0658 Sgly_0658 Sgly_0658 641677 642498 + Multi-copper polyphenol oxidoreductase%2C laccase COGs: COG1496 conserved hypothetical protein~InterPro IPR003730~KEGG: dhd:Dhaf_4051 protein of unknown function DUF152~PFAM: Multi-copper polyphenol oxidoreductase%2C laccase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Multi-copper polyphenol oxidoreductase%2C laccase~PFAM: Multi-copper polyphenol oxidoreductase laccase~TIGRFAM: uncharacterized protein%2C YfiH family gene gene683 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0658 Sgly_0659 Sgly_0659 Sgly_0659 642588 643514 + hypothetical protein KEGG: dsy:DSY2889 hypothetical protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: putative membrane fusion protein gene gene684 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0659 Sgly_0660 Sgly_0660 Sgly_0660 643622 644311 + protein of unknown function UPF0001 COGs: COG0325 enzyme with a TIM-barrel fold~InterPro IPR001608: IPR011078~KEGG: dsy:DSY2888 hypothetical protein~PFAM: Alanine racemase%2C N-terminal~SPTR: Putative uncharacterized protein%3B~TIGRFAM: pyridoxal phosphate-dependent enzyme%2C YBL036C type~PFAM: Alanine racemase%2C N-terminal domain~TIGRFAM: pyridoxal phosphate enzyme%2C YggS family gene gene685 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0660 Sgly_0661 Sgly_0661 Sgly_0661 644345 644869 + Cell division protein sepF COGs: COG1799 conserved hypothetical protein~HAMAP: Cell division protein sepF~InterPro IPR007561~KEGG: dsy:DSY2887 hypothetical protein~PFAM: Cell division protein SepF~SPTR: Cell division protein sepF%3B~PFAM: Protein of unknown function (DUF552) gene gene686 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0661 Sgly_0662 Sgly_0662 Sgly_0662 644910 645197 + protein of unknown function YGGT InterPro IPR003425~KEGG: dhd:Dhaf_4045 protein of unknown function YGGT~PFAM: Protein of unknown function YGGT~SPTR: Putative uncharacterized protein%3B~PFAM: YGGT family gene gene687 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0662 Sgly_0663 Sgly_0663 Sgly_0663 645576 648350 + Isoleucyl-tRNA synthetase COGs: COG0060 Isoleucyl-tRNA synthetase~HAMAP: Isoleucyl-tRNA synthetase~InterPro IPR002300: IPR013155: IPR010663: IPR002301~KEGG: dhd:Dhaf_4041 isoleucyl-tRNA synthetase~PFAM: Aminoacyl-tRNA synthetase%2C class Ia%3B Valyl/Leucyl/Isoleucyl-tRNA synthetase%2C class I%2C anticodon-binding%3B DNA glycosylase/AP lyase/isoleucyl tRNA synthetase%2C zinc finger domain~PRIAM: Isoleucine--tRNA ligase~SPTR: Isoleucyl-tRNA synthetase%3B~TIGRFAM: Isoleucyl-tRNA synthetase%2C class Ia~PFAM: tRNA synthetases class I (I%2C L%2C M and V)%3B Anticodon-binding domain%3B Zinc finger found in FPG and IleRS~TIGRFAM: isoleucyl-tRNA synthetase gene gene688 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0663 Sgly_0664 Sgly_0664 Sgly_0664 648509 648820 + hypothetical protein KEGG: bfu:BC1G_14101 hypothetical protein~SPTR: Putative uncharacterized protein gene gene689 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0664 Sgly_0665 Sgly_0665 Sgly_0665 649091 649414 + DNA polymerase beta domain protein region InterPro IPR002934~KEGG: ttm:Tthe_0676 DNA polymerase beta domain protein region~PFAM: Nucleotidyltransferase~SPTR: DNA polymerase beta domain protein region%3B~PFAM: Nucleotidyltransferase domain gene gene690 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0665 Sgly_0666 Sgly_0666 Sgly_0666 649407 649811 + HEPN domain protein COGs: COG2250 conserved hypothetical protein related to C-terminal domain of eukaryotic chaperone SACSIN~InterPro IPR007842~KEGG: ttm:Tthe_0675 HEPN domain protein~PFAM: HEPN~SMART: HEPN~SPTR: HEPN domain protein%3B~manually curated~PFAM: HEPN domain gene gene691 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0666 Sgly_0667 Sgly_0667 Sgly_0667 650105 650965 + methyl-accepting chemotaxis sensory transducer COGs: COG0840 Methyl-accepting chemotaxis protein~InterPro IPR004089~KEGG: dhd:Dhaf_4040 methyl-accepting chemotaxis sensory transducer~PFAM: Chemotaxis methyl-accepting receptor%2C signalling~SMART: Chemotaxis methyl-accepting receptor%2C signalling~SPTR: Putative uncharacterized protein%3B~PFAM: Putative sugar diacid recognition%3B Methyl-accepting chemotaxis protein (MCP) signaling domain gene gene692 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0667 Sgly_0668 Sgly_0668 Sgly_0668 650981 651865 - N-carbamoylputrescine amidase COGs: COG0388 amidohydrolase~InterPro IPR003010: IPR017755~KEGG: cbe:Cbei_1921 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase~PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase~PRIAM: N-carbamoylputrescine amidase~SPTR: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase%3B~TIGRFAM: N-carbamoylputrescine amidase~PFAM: Carbon-nitrogen hydrolase~TIGRFAM: N-carbamoylputrescine amidase gene gene693 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0668 Sgly_0669 Sgly_0669 Sgly_0669 651865 652902 - agmatine deiminase COGs: COG2957 Peptidylarginine deiminase~InterPro IPR007466~KEGG: cbe:Cbei_1922 agmatine deiminase~PFAM: Peptidyl-arginine deiminase%2C Porphyromonas-type~PRIAM: Agmatine deiminase~SPTR: Agmatine deiminase%3B~PFAM: Porphyromonas-type peptidyl-arginine deiminase~TIGRFAM: agmatine deiminase gene gene694 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0669 Sgly_0670 Sgly_0670 Sgly_0670 653053 653784 + 2-phosphosulfolactate phosphatase COGs: COG2045 Phosphosulfolactate phosphohydrolase~HAMAP: 2-phosphosulfolactate phosphatase~InterPro IPR005238~KEGG: sth:STH1711 hypothetical protein~PFAM: 2-phosphosulpholactate phosphatase~SPTR: Probable 2-phosphosulfolactate phosphatase%3B~PFAM: 2-phosphosulpholactate phosphatase gene gene695 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0670 Sgly_0671 Sgly_0671 Sgly_0671 653843 654421 + Propanediol utilization protein COGs: COG4869 Propanediol utilization protein~InterPro IPR008300~KEGG: dhd:Dhaf_4034 propanediol utilization protein~PFAM: Propanediol utilisation protein~SPTR: Putative uncharacterized protein%3B~PFAM: Propanediol utilisation protein PduL gene gene696 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0671 Sgly_0672 Sgly_0672 Sgly_0672 654434 654880 + signal peptidase II COGs: COG0597 Lipoprotein signal peptidase~HAMAP: Peptidase A8%2C signal peptidase II~InterPro IPR001872~KEGG: dhd:Dhaf_4023 lipoprotein signal peptidase~PFAM: Peptidase A8%2C signal peptidase II~SPTR: Lipoprotein signal peptidase%3B~TIGRFAM: Peptidase A8%2C signal peptidase II~PFAM: Signal peptidase (SPase) II~TIGRFAM: lipoprotein signal peptidase gene gene697 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0672 Sgly_0673 Sgly_0673 Sgly_0673 654877 655815 + ribosomal large subunit pseudouridine synthase D COGs: COG0564 Pseudouridylate synthase 23S RNA-specific~InterPro IPR002942: IPR006145: IPR006225~KEGG: dsy:DSY2865 hypothetical protein~PFAM: Pseudouridine synthase%2C RsuA and RluB/C/D/E/F%3B RNA-binding S4~SMART: RNA-binding S4~SPTR: Pseudouridine synthase%3B~TIGRFAM: Pseudouridine synthase%2C RluC/RluD~PFAM: RNA pseudouridylate synthase%3B S4 domain~TIGRFAM: pseudouridine synthase%2C RluA family gene gene698 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0673 Sgly_0674 Sgly_0674 Sgly_0674 655960 656505 + Bifunctional protein pyrR COGs: COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase~HAMAP: Bifunctional protein pyrR~InterPro IPR000836~KEGG: dsy:DSY2863 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase~PFAM: Phosphoribosyltransferase~PRIAM: Uracil phosphoribosyltransferase~SPTR: Putative uncharacterized protein%3B~PFAM: Phosphoribosyl transferase domain gene gene699 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0674 Sgly_0675 Sgly_0675 Sgly_0675 656652 657590 + aspartate carbamoyltransferase COGs: COG0540 Aspartate carbamoyltransferase catalytic chain~HAMAP: Aspartate carbamoyltransferase%2C eukaryotic~InterPro IPR006132: IPR006131: IPR002082~KEGG: dhd:Dhaf_4019 aspartate carbamoyltransferase catalytic subunit~PFAM: Aspartate/ornithine carbamoyltransferase%2C carbamoyl-P binding%3B Aspartate/ornithine carbamoyltransferase%2C Asp/Orn-binding domain~PRIAM: Aspartate carbamoyltransferase~SPTR: Aspartate carbamoyltransferase%3B~TIGRFAM: Aspartate carbamoyltransferase%2C eukaryotic~PFAM: Aspartate/ornithine carbamoyltransferase%2C carbamoyl-P binding domain%3B Aspartate/ornithine carbamoyltransferase%2C Asp/Orn binding domain~TIGRFAM: aspartate carbamoyltransferase gene gene700 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0675 Sgly_0676 Sgly_0676 Sgly_0676 657577 658896 + dihydroorotase COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase~InterPro IPR006680: IPR004722~KEGG: dsy:DSY2861 hypothetical protein~PFAM: Amidohydrolase 1~PRIAM: Dihydroorotase~SPTR: Dihydroorotase%3B~TIGRFAM: Dihydroorotase multifunctional complex type~PFAM: Amidohydrolase family~TIGRFAM: dihydroorotase%2C multifunctional complex type gene gene701 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0676 Sgly_0677 Sgly_0677 Sgly_0677 658970 660067 + carbamoyl-phosphate synthase small subunit COGs: COG0505 Carbamoylphosphate synthase small subunit~InterPro IPR002474: IPR000991: IPR006274~KEGG: dhd:Dhaf_4017 carbamoyl-phosphate synthase%2C small subunit~PFAM: Glutamine amidotransferase class-I%2C C-terminal%3B Carbamoyl phosphate synthase%2C small subunit%2C N-terminal~PRIAM: Carbamoyl-phosphate synthase (glutamine-hydrolyzing)~SPTR: Carbamoyl-phosphate synthase%2C small subunit%3B~TIGRFAM: Carbamoyl phosphate synthase%2C small subunit~PFAM: Carbamoyl-phosphate synthase small chain%2C CPSase domain%3B Glutamine amidotransferase class-I~TIGRFAM: carbamoyl-phosphate synthase%2C small subunit gene gene702 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0677 Sgly_0678 Sgly_0678 Sgly_0678 660060 663248 + carbamoyl-phosphate synthase large subunit COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ)~InterPro IPR005481: IPR005479: IPR005480: IPR011607: IPR 006275~KEGG: dsy:DSY2859 hypothetical protein~PFAM: Carbamoyl phosphate synthetase%2C large subunit%2C ATP-binding%3B Carbamoyl phosphate synthase%2C large subunit%2C N-terminal%3B Carbamoyl phosphate synthetase%2C large subunit%2C oligomerisation%3B MGS-like~PRIAM: Carbamoyl-phosphate synthase (ammonia)~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Carbamoyl phosphate synthase%2C large subunit%2C glutamine-dependent~PFAM: Carbamoyl-phosphate synthase L chain%2C ATP binding domain%3B MGS-like domain%3B Carbamoyl-phosphate synthetase large chain%2C oligomerisation domain%3B Carbamoyl-phosphate synthase L chain%2C N-terminal domain~TIGRFAM: carbamoyl-phosphate synthase%2C large subunit gene gene703 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0678 Sgly_0679 Sgly_0679 Sgly_0679 663269 664096 + Dihydroorotate dehydrogenase%2C electron transfer subunit%2C iron-sulfur cluster binding domain protein COGs: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase~InterPro IPR008333: IPR001433: IPR019480~KEGG: dsy:DSY2858 hypothetical protein~PFAM: Dihydroorotate dehydrogenase%2C electron transfer subunit%2C iron-sulphur cluster binding domain%3B Oxidoreductase FAD/NAD(P)-binding%3B Oxidoreductase%2C FAD-binding domain~SPTR: Putative uncharacterized protein%3B~PFAM: Oxidoreductase FAD-binding domain%3B Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B%3B Oxidoreductase NAD-binding domain gene gene704 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0679 Sgly_0680 Sgly_0680 Sgly_0680 664083 664997 + dihydroorotate oxidase B%2C catalytic subunit COGs: COG0167 Dihydroorotate dehydrogenase~InterPro IPR012135: IPR005720~KEGG: dhd:Dhaf_4014 dihydroorotate dehydrogenase family protein~PFAM: Dihydroorotate dehydrogenase%2C class 1/ 2~PRIAM: Dihydroorotate oxidase~SPTR: Dihydroorotate dehydrogenase family protein%3B~TIGRFAM: Dihydroorotate dehydrogenase%2C class 1%2C core~PFAM: Dihydroorotate dehydrogenase~TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein gene gene705 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0680 Sgly_0681 Sgly_0681 Sgly_0681 665067 665792 + orotidine-5'-phosphate decarboxylase COGs: COG0284 Orotidine-5'-phosphate decarboxylase~InterPro IPR001754: IPR014732~KEGG: dhd:Dhaf_4013 orotidine 5'-phosphate decarboxylase~PFAM: Orotidine 5'-phosphate decarboxylase%2C core~PRIAM: Orotidine-5'-phosphate decarboxylase~SPTR: Orotidine 5'-phosphate decarboxylase%3B~TIGRFAM: Orotidine 5'-phosphate decarboxylase%2C subfamily 1%2C core~PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family~TIGRFAM: orotidine 5'-phosphate decarboxylase%2C subfamily 1 gene gene706 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0681 Sgly_0682 Sgly_0682 Sgly_0682 665828 666406 + orotate phosphoribosyltransferase COGs: COG0461 Orotate phosphoribosyltransferase~InterPro IPR000836: IPR006273~KEGG: dhd:Dhaf_4012 orotate phosphoribosyltransferase~PFAM: Phosphoribosyltransferase~PRIAM: Orotate phosphoribosyltransferase~SPTR: Orotate phosphoribosyltransferase%3B~TIGRFAM: Orotate phosphoribosyltransferase%2C Thermus type~PFAM: Phosphoribosyl transferase domain~TIGRFAM: orotate phosphoribosyltransferase%2C Thermus family%3B orotate phosphoribosyltransferase gene gene707 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0682 Sgly_0683 Sgly_0683 Sgly_0683 666412 666663 - hypothetical protein KEGG: mdo:100023427 hypothetical protein LOC100023427~SPTR: Zinc finger protein%2C putative gene gene708 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0683 Sgly_0684 Sgly_0684 Sgly_0684 666998 667555 - Accessory gene regulator B InterPro IPR006741~KEGG: dhd:Dhaf_0915 accessory gene regulator B~PFAM: Accessory gene regulator B~SMART: Accessory gene regulator B~SPTR: Accessory gene regulator B%3B~manually curated~PFAM: Accessory gene regulator B gene gene709 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0684 Sgly_0685 Sgly_0685 Sgly_0685 667533 668030 - hypothetical protein KEGG: dsy:DSY4414 hypothetical protein~SPTR: Putative uncharacterized protein gene gene710 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0685 Sgly_0686 Sgly_0686 Sgly_0686 668045 669868 - multi-sensor signal transduction histidine kinase COGs: COG0642 Signal transduction histidine kinase~InterPro IPR000014: IPR003661: IPR003594: IPR013656~KEGG: dsy:DSY4412 hypothetical protein~PFAM: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain%3B PAS fold-4~SMART: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain%3B PAS~SPTR: Putative uncharacterized protein%3B~PFAM: Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain%3B PAS fold gene gene711 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0686 Sgly_0687 Sgly_0687 Sgly_0687 670096 671943 - Fibronectin-binding A domain protein COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP~InterPro IPR008616: IPR008532~KEGG: dsy:DSY2750 hypothetical protein~PFAM: Fibronectin-binding A%2C N-terminal%3B Protein of unknown function DUF814~SPTR: Putative uncharacterized protein%3B~PFAM: Domain of unknown function (DUF814)%3B Fibronectin-binding protein A N-terminus (FbpA) gene gene712 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0687 Sgly_0688 Sgly_0688 Sgly_0688 672059 674785 + ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC COGs: COG0474 Cation transport ATPase~InterPro IPR004014: IPR008250: IPR005834: IPR006068: IPR 001757~KEGG: dsy:DSY2749 hypothetical protein~PFAM: ATPase%2C P-type%2C ATPase-associated domain%3B ATPase%2C P-type cation-transporter%2C N-terminal%3B Haloacid dehalogenase-like hydrolase%3B ATPase%2C P-type cation-transporter%2C C-terminal~PRIAM: Calcium-transporting ATPase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: ATPase%2C P-type%2C K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter~PFAM: E1-E2 ATPase%3B Cation transporting ATPase%2C C-terminus%3B Cation transporter/ATPase%2C N-terminus%3B haloacid dehalogenase-like hydrolase~TIGRFAM: plasma-membrane calcium-translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC%3B potassium and/or sodium efflux P-type ATPase%2C fungal-type gene gene713 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0688 Sgly_0689 Sgly_0689 Sgly_0689 674861 675709 + diaminopimelate epimerase COGs: COG0253 Diaminopimelate epimerase~HAMAP: Diaminopimelate epimerase~InterPro IPR001653~KEGG: dsy:DSY2743 hypothetical protein~PFAM: Diaminopimelate epimerase~PRIAM: Diaminopimelate epimerase~SPTR: Diaminopimelate epimerase%3B~TIGRFAM: Diaminopimelate epimerase~PFAM: Diaminopimelate epimerase~TIGRFAM: diaminopimelate epimerase gene gene714 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0689 Sgly_0690 Sgly_0690 Sgly_0690 675842 676720 + Conserved hypothetical protein CHP00255 COGs: COG1561 Uncharacterized stress-induced protein~InterPro IPR013527: IPR013551: IPR005229~KEGG: dsy:DSY2731 hypothetical protein~PFAM: Domain of unknown function DUF1732%3B YicC-like%2C N-terminal~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Conserved hypothetical protein CHP00255~PFAM: YicC-like family%2C N-terminal region%3B Domain of unknown function (DUF1732)~TIGRFAM: conserved hypothetical protein TIGR00255 gene gene715 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0690 Sgly_0691 Sgly_0691 Sgly_0691 676735 677010 + UPF0296 protein COGs: COG2052 conserved hypothetical protein~HAMAP: UPF0296 protein~InterPro IPR007169~KEGG: dhd:Dhaf_3895 hypothetical protein~PFAM: Protein of unknown function DUF370~SPTR: UPF0296 protein Dhaf_3895%3B~PFAM: Domain of unknown function (DUF370) gene gene716 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0691 Sgly_0692 Sgly_0692 Sgly_0692 677013 677612 + guanylate kinase COGs: COG0194 Guanylate kinase~HAMAP: Guanylate kinase%2C sub-group~InterPro IPR008145: IPR008144: IPR017665~KEGG: dsy:DSY2729 guanylate kinase~PFAM: Guanylate kinase~PRIAM: Guanylate kinase~SMART: Guanylate kinase/L-type calcium channel~SPTR: Guanylate kinase%3B~TIGRFAM: Guanylate kinase%2C sub-group~PFAM: Guanylate kinase~TIGRFAM: guanylate kinase gene gene717 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0692 Sgly_0693 Sgly_0693 Sgly_0693 677626 677829 + DNA-directed RNA polymerase subunit omega HAMAP: DNA-directed RNA polymerase%2C omega subunit~InterPro IPR006110: IPR003716~KEGG: dhd:Dhaf_3893 DNA-directed RNA polymerase%2C omega subunit~PFAM: RNA polymerase Rpb6~SPTR: DNA-directed RNA polymerase subunit omega%3B~TIGRFAM: DNA-directed RNA polymerase%2C omega subunit~PFAM: RNA polymerase Rpb6~TIGRFAM: DNA-directed RNA polymerase%2C omega subunit gene gene718 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0693 Sgly_0694 Sgly_0694 Sgly_0694 677829 679022 + Phosphopantothenoylcysteine decarboxylase%3B Phosphopantothenate-cysteine ligase COGs: COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase~InterPro IPR003382: IPR007085: IPR005252~KEGG: dhd:Dhaf_3892 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase~PFAM: DNA/pantothenate metabolism flavoprotein%2C C-terminal%3B Flavoprotein~PRIAM: Phosphopantothenate--cysteine ligase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase~PFAM: DNA / pantothenate metabolism flavoprotein%3B Flavoprotein~TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase%2C prokaryotic gene gene719 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0694 Sgly_0695 Sgly_0695 Sgly_0695 679019 680230 + methionine adenosyltransferase COGs: COG0192 S-adenosylmethionine synthetase~HAMAP: S-adenosylmethionine synthetase~InterPro IPR002133~KEGG: dhd:Dhaf_3891 S-adenosylmethionine synthetase~PFAM: S-adenosylmethionine synthetase~PRIAM: Methionine adenosyltransferase~SPTR: S-adenosylmethionine synthase%3B~TIGRFAM: S-adenosylmethionine synthetase~PFAM: S-adenosylmethionine synthetase%2C C-terminal domain%3B S-adenosylmethionine synthetase%2C central domain%3B S-adenosylmethionine synthetase%2C N-terminal domain~TIGRFAM: S-adenosylmethionine synthetase gene gene720 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0695 Sgly_0696 Sgly_0696 Sgly_0696 680255 681520 + phenylacetate-CoA ligase COGs: COG1541 Coenzyme F390 synthetase~InterPro IPR000873~KEGG: adg:Adeg_0166 phenylacetate--CoA ligase~PFAM: AMP-dependent synthetase/ligase~PRIAM: Phenylacetate--CoA ligase~SPTR: Phenylacetate--CoA ligase%3B~PFAM: AMP-binding enzyme gene gene721 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0696 Sgly_0697 Sgly_0697 Sgly_0697 681544 681945 + ACT domain protein COGs: COG4747 ACT domain-containing protein~InterPro IPR002912~KEGG: aar:Acear_1789 ACT domain protein~PFAM: Amino acid-binding ACT~SPTR: ACT domain protein%3B~PFAM: ACT domain gene gene722 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0697 Sgly_0698 Sgly_0698 Sgly_0698 681945 682118 + hypothetical protein gene gene723 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0698 Sgly_0699 Sgly_0699 Sgly_0699 682199 682753 + manganese containing catalase COGs: COG3546 Mn-containing catalase~InterPro IPR007760~KEGG: dhd:Dhaf_1481 manganese containing catalase~PFAM: Catalase%2C manganese~SPTR: Putative uncharacterized protein%3B~PFAM: Manganese containing catalase gene gene724 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0699 Sgly_0700 Sgly_0700 Sgly_0700 682783 684135 + Cysteine desulfurase COGs: COG0520 Selenocysteine lyase~InterPro IPR000192~KEGG: cbi:CLJ_B0418 aminotransferase%2C class V~PFAM: Aminotransferase%2C class V/Cysteine desulfurase~PRIAM: Cysteine desulfurase~SPTR: Aminotransferase%2C class V%3B~PFAM: Aminotransferase class-V gene gene725 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0700 Sgly_0701 Sgly_0701 Sgly_0701 684539 685063 + hypothetical protein COGs: COG2210 conserved hypothetical protein~KEGG: aoe:Clos_0404 hypothetical protein~SPTR: Putative uncharacterized protein gene gene726 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0701 Sgly_0702 Sgly_0702 Sgly_0702 685144 686526 + Citrate synthase COGs: COG0372 Citrate synthase~InterPro IPR002020~KEGG: dhd:Dhaf_0903 citrate synthase~PFAM: Citrate synthase-like~SPTR: Putative uncharacterized protein%3B~PFAM: Citrate synthase gene gene727 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0702 Sgly_0703 Sgly_0703 Sgly_0703 686834 687007 + 5-oxoprolinase (ATP-hydrolyzing) KEGG: iho:Igni_0292 5-oxoprolinase (ATP-hydrolyzing) gene gene728 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0703 Sgly_0704 Sgly_0704 Sgly_0704 689364 690194 + PRC-barrel domain protein COGs: COG3881 conserved hypothetical protein~InterPro IPR007903~KEGG: dhd:Dhaf_3061 hypothetical protein~PFAM: PRC-barrel~SPTR: Putative uncharacterized protein%3B~PFAM: PRC-barrel domain gene gene729 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0704 Sgly_0705 Sgly_0705 Sgly_0705 690203 691318 + VanW family protein COGs: COG2720 Uncharacterized vancomycin resistance protein~InterPro IPR007391~KEGG: dhd:Dhaf_3060 VanW family protein~PFAM: VanW~SPTR: Putative uncharacterized protein%3B~PFAM: VanW like protein gene gene730 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0705 Sgly_0706 Sgly_0706 Sgly_0706 691456 692013 - hypothetical protein KEGG: dhd:Dhaf_0975 hypothetical protein~SPTR: Putative uncharacterized protein gene gene731 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0706 Sgly_0707 Sgly_0707 Sgly_0707 692250 692585 + TrpR like protein%2C YerC/YecD COGs: COG4496 conserved hypothetical protein~InterPro IPR000831: IPR013368~KEGG: dhd:Dhaf_1488 TrpR like protein%2C YerC/YecD~PFAM: Trp repressor~SPTR: Putative uncharacterized protein%3B~TIGRFAM: TrpR homologue YerC/YecD~PFAM: Trp repressor protein~TIGRFAM: TrpR-related protein YerC/YecD gene gene732 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0707 Sgly_0708 Sgly_0708 Sgly_0708 692655 693824 + ATP phosphoribosyltransferase regulatory subunit COGs: COG3705 ATP phosphoribosyltransferase involved in histidine biosynthesis~HAMAP: ATP phosphoribosyltransferase regulatory subunit~InterPro IPR002314: IPR004517~KEGG: dsy:DSY3916 hypothetical protein~PFAM: Aminoacyl-tRNA synthetase%2C class II (G/ H/ P/ S)%2C conserved domain~PRIAM: Histidine--tRNA ligase~SPTR: ATP phosphoribosyltransferase regulatory subunit%3B~TIGRFAM: Histidyl-tRNA synthetase%2C class IIa%2C putative~PFAM: tRNA synthetase class II core domain (G%2C H%2C P%2C S and T)~TIGRFAM: ATP phosphoribosyltransferase%2C regulatory subunit gene gene733 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0708 Sgly_0709 Sgly_0709 Sgly_0709 693874 694956 + 6-phosphofructokinase COGs: COG0205 6-phosphofructokinase~HAMAP: 6-phosphofructokinase~InterPro IPR000023: IPR012829~KEGG: dhd:Dhaf_2529 6-phosphofructokinase~PFAM: Phosphofructokinase~PRIAM: 6-phosphofructokinase~SPTR: 6-phosphofructokinase%3B~TIGRFAM: Phosphofructokinase%2C pyrophosphate dependent~PFAM: Phosphofructokinase~TIGRFAM: phosphofructokinase gene gene734 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0709 Sgly_0710 Sgly_0710 Sgly_0710 695152 695853 + ATP phosphoribosyltransferase catalytic subunit COGs: COG0040 ATP phosphoribosyltransferase~HAMAP: ATP phosphoribosyltransferase~InterPro IPR013820~KEGG: dhd:Dhaf_1491 ATP phosphoribosyltransferase catalytic subunit~PFAM: ATP phosphoribosyltransferase%2C catalytic domain~PRIAM: ATP phosphoribosyltransferase~SPTR: ATP phosphoribosyltransferase%3B~TIGRFAM: ATP phosphoribosyltransferase%2C catalytic domain~PFAM: ATP phosphoribosyltransferase~TIGRFAM: ATP phosphoribosyltransferase gene gene735 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0710 Sgly_0711 Sgly_0711 Sgly_0711 695850 697130 + histidinol dehydrogenase COGs: COG0141 Histidinol dehydrogenase~HAMAP: Histidinol dehydrogenase%2C prokaryotic-type~InterPro IPR012131~KEGG: dhd:Dhaf_1492 histidinol dehydrogenase~PFAM: Histidinol dehydrogenase%2C prokaryotic-type~PRIAM: Histidinol dehydrogenase~SPTR: Histidinol dehydrogenase%3B~TIGRFAM: Histidinol dehydrogenase%2C prokaryotic-type~PFAM: Histidinol dehydrogenase~TIGRFAM: histidinol dehydrogenase gene gene736 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0711 Sgly_0712 Sgly_0712 Sgly_0712 697127 698191 + histidinol phosphate aminotransferase apoenzyme COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase~HAMAP: Histidinol-phosphate aminotransferase~InterPro IPR004839: IPR005861~KEGG: dhd:Dhaf_1493 histidinol-phosphate aminotransferase~PFAM: Aminotransferase%2C class I/II~PRIAM: Histidinol-phosphate transaminase~SPTR: Histidinol-phosphate aminotransferase%3B~TIGRFAM: Histidinol-phosphate aminotransferase~PFAM: Aminotransferase class I and II~TIGRFAM: histidinol-phosphate aminotransferase gene gene737 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0712 Sgly_0713 Sgly_0713 Sgly_0713 698204 698788 + imidazoleglycerol-phosphate dehydratase COGs: COG0131 Imidazoleglycerol-phosphate dehydratase~HAMAP: Imidazoleglycerol-phosphate dehydratase~InterPro IPR000807~KEGG: dhd:Dhaf_1494 imidazoleglycerol-phosphate dehydratase~PFAM: Imidazoleglycerol-phosphate dehydratase~PRIAM: Imidazoleglycerol-phosphate dehydratase~SPTR: Imidazoleglycerol-phosphate dehydratase%3B~PFAM: Imidazoleglycerol-phosphate dehydratase gene gene738 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0713 Sgly_0714 Sgly_0714 Sgly_0714 698820 699446 + imidazole glycerol phosphate synthase subunit hisH COGs: COG0118 Glutamine amidotransferase~HAMAP: Imidazole glycerol phosphate synthase%2C subunit H~InterPro IPR000991: IPR010139~KEGG: dhd:Dhaf_1495 imidazole glycerol phosphate synthase subunit HisH~PFAM: Glutamine amidotransferase class-I%2C C-terminal~SPTR: Imidazole glycerol phosphate synthase subunit hisH%3B~TIGRFAM: Imidazole glycerol phosphate synthase%2C subunit H~PFAM: Glutamine amidotransferase class-I~TIGRFAM: imidazole glycerol phosphate synthase%2C glutamine amidotransferase subunit gene gene739 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0714 Sgly_0715 Sgly_0715 Sgly_0715 699424 700173 + 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase COGs: COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase~HAMAP:1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase~InterPro IPR006062: IPR006063~KEGG: dhd:Dhaf_1496 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase~PFAM: Histidine biosynthesis~PRIAM:1-(5-phosphoribosyl)-5-((5-phosphoribosylamin o)methylideneamino)imidazole-4-carboxamideisomerase~SPTR:1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase%3B~TIGRFAM: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase~manually curated~PFAM: Histidine biosynthesis protein~TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase gene gene740 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0715 Sgly_0716 Sgly_0716 Sgly_0716 700163 700921 + imidazole glycerol phosphate synthase subunit hisF COGs: COG0107 Imidazoleglycerol-phosphate synthase~HAMAP: Histidine biosynthesis%2C HisF~InterPro IPR006062: IPR004651~KEGG: dhd:Dhaf_1497 imidazole glycerol phosphate synthase subunit HisF~PFAM: Histidine biosynthesis~PRIAM:1-(5-phosphoribosyl)-5-((5-phosphoribosylamin o)methylideneamino)imidazole-4-carboxamideisomerase~SPTR: Imidazole glycerol phosphate synthase subunit hisF%3B~TIGRFAM: Histidine biosynthesis%2C HisF~PFAM: Histidine biosynthesis protein~TIGRFAM: imidazoleglycerol phosphate synthase%2C cyclase subunit gene gene741 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0716 Sgly_0717 Sgly_0717 Sgly_0717 701026 701745 + Phosphoribosyl-ATP pyrophosphatase COGs: COG0139 Phosphoribosyl-AMP cyclohydrolase~HAMAP: Phosphoribosyl-ATP pyrophosphohydrolase%3B Histidine biosynthesis bifunctional protein hisIE~InterPro IPR002496: IPR021130: IPR008179~KEGG: dhd:Dhaf_1498 phosphoribosyl-ATP diphosphatase~PFAM: Phosphoribosyl-AMP cyclohydrolase%3B Phosphoribosyl-ATP pyrophosphohydrolase-like~PRIAM: Phosphoribosyl-AMP cyclohydrolase.%2C Phosphoribosyl-ATP diphosphatase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Phosphoribosyl-ATP pyrophosphohydrolase~PFAM: Phosphoribosyl-ATP pyrophosphohydrolase%3B Phosphoribosyl-AMP cyclohydrolase~TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase gene gene742 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0717 Sgly_0718 Sgly_0718 Sgly_0718 701880 702197 + MazG nucleotide pyrophosphohydrolase InterPro IPR004518~KEGG: dhd:Dhaf_4426 MazG nucleotide pyrophosphohydrolase~PFAM: NTP pyrophosphohydrolase MazG%2C putative catalytic core~SPTR: Putative uncharacterized protein%3B~PFAM: MazG nucleotide pyrophosphohydrolase domain gene gene743 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0718 Sgly_0719 Sgly_0719 Sgly_0719 702219 704456 + ATP-dependent DNA helicase PcrA COGs: COG0210 Superfamily I DNA and RNA helicase~InterPro IPR000212: IPR005751~KEGG: dsy:DSY3891 hypothetical protein~PFAM: DNA helicase%2C UvrD/REP type~SPTR: Putative uncharacterized protein%3B~TIGRFAM: DNA helicase%2C ATP-dependent%2C PcrA type~PFAM: UvrD/REP helicase~TIGRFAM: ATP-dependent DNA helicase PcrA gene gene744 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0719 Sgly_0720 Sgly_0720 Sgly_0720 704470 706485 + DNA ligase COGs: COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)~HAMAP: DNA ligase~InterPro IPR013840: IPR003583: IPR001357: IPR013839: IPR 004150: IPR004149: IPR000445: IPR001679~KEGG: dhd:Dhaf_1517 DNA ligase%2C NAD-dependent~PFAM: NAD-dependent DNA ligase%2C adenylation%3B NAD-dependent DNA ligase%2C OB-fold%3B Zinc-finger%2C NAD-dependent DNA ligase C4-type%3B Helix-hairpin-helix motif%3B BRCT~SMART: NAD-dependent DNA ligase%2C N-terminal%3B Helix-hairpin-helix DNA-binding motif%2C class 1%3B BRCT~SPTR: DNA ligase%3B~TIGRFAM: NAD-dependent DNA ligase~PFAM: NAD-dependent DNA ligase OB-fold domain%3B NAD-dependent DNA ligase adenylation domain%3B NAD-dependent DNA ligase C4 zinc finger domain%3B BRCA1 C Terminus (BRCT) domain~TIGRFAM: DNA ligase%2C NAD-dependent gene gene745 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0720 Sgly_0721 Sgly_0721 Sgly_0721 706555 707541 + glucokinase COGs: COG0837 Glucokinase~InterPro IPR003836~KEGG: dsy:DSY2007 hypothetical protein~PFAM: Glucokinase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Glucokinase~PFAM: Glucokinase~TIGRFAM: glucokinase%2C proteobacterial type gene gene746 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0721 Sgly_0722 Sgly_0722 Sgly_0722 707532 708167 - beta-phosphoglucomutase COGs: COG0637 phosphatase/phosphohexomutase~InterPro IPR005834: IPR010972: IPR010976: IPR006402~KEGG: cpy:Cphy_1021 beta-phosphoglucomutase~PFAM: Haloacid dehalogenase-like hydrolase~PRIAM: Beta-phosphoglucomutase~SPTR: Beta-phosphoglucomutase%3B~TIGRFAM: Beta-phosphoglucomutase%3B Beta-phosphoglucomutase hydrolase%3B HAD-superfamily hydrolase%2C subfamily IA%2C variant 3~manually curated~PFAM: haloacid dehalogenase-like hydrolase~TIGRFAM: beta-phosphoglucomutase family hydrolase%3B beta-phosphoglucomutase%3B haloacid dehalogenase superfamily%2C subfamily IA%2C variant 3 with third motif having DD or ED gene gene747 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0722 Sgly_0723 Sgly_0723 Sgly_0723 708163 710490 - Kojibiose phosphorylase COGs: COG1554 Trehalose and maltose hydrolase (possible phosphorylase)~InterPro IPR005196: IPR005195: IPR005194~KEGG: gym:GYMC10_0477 glycoside hydrolase family 65 central catalytic~PFAM: Glycoside hydrolase family 65%2C central catalytic%3B Glycoside hydrolase family 65%2C N-terminal%3B Glycoside hydrolase%2C family 65%2C C-terminal~PRIAM: Kojibiose phosphorylase~SPTR: Putative uncharacterized protein%3B~PFAM: Glycosyl hydrolase family 65%2C C-terminal domain%3B Glycosyl hydrolase family 65 central catalytic domain%3B Glycosyl hydrolase family 65%2C N-terminal domain gene gene748 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0723 Sgly_0724 Sgly_0724 Sgly_0724 710522 712735 - HAD-superfamily hydrolase%2C subfamily IIB COGs: COG0380 Trehalose-6-phosphate synthase~InterPro IPR001830: IPR003337: IPR006379~KEGG: gfo:GFO_1041 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB~PFAM: Glycosyl transferase%2C family 20%3B Trehalose-phosphatase~PRIAM: Alpha%2Calpha-trehalose-phosphate synthase (UDP-forming).%2C Trehalose-phosphatase~SPTR: Trehalose-6-phosphate synthase%3B~TIGRFAM: HAD-superfamily hydrolase%2C subfamily IIB%3B Trehalose-phosphatase~PFAM: Trehalose-phosphatase%3B Glycosyltransferase family 20~TIGRFAM: trehalose-phosphatase%3B alpha%2Calpha-trehalose-phosphate synthase [UDP-forming]%3B HAD-superfamily hydrolase%2C subfamily IIB gene gene749 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0724 Sgly_0725 Sgly_0725 Sgly_0725 712875 713609 - hypothetical protein KEGG: dhd:Dhaf_0837 hypothetical protein~SPTR: Putative uncharacterized protein gene gene750 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0725 Sgly_0726 Sgly_0726 Sgly_0726 713911 714195 + aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C COGs: COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit~HAMAP: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C~InterPro IPR003837~KEGG: dhd:Dhaf_1518 aspartyl/glutamyl-tRNA amidotransferase subunit C~PFAM: Glu-tRNAGln amidotransferase%2C C subunit~SPTR: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C%3B~TIGRFAM: Glu-tRNAGln amidotransferase%2C C subunit~PFAM: Glu-tRNAGln amidotransferase C subunit~TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase%2C C subunit gene gene751 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0726 Sgly_0727 Sgly_0727 Sgly_0727 714220 715686 + aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase~HAMAP: Glutamyl-tRNA(Gln) amidotransferase A subunit~InterPro IPR000120: IPR004412~KEGG: dhd:Dhaf_1519 aspartyl/glutamyl-tRNA amidotransferase subunit A~PFAM: Amidase~PRIAM: Amidase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase A subunit~PFAM: Amidase~TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase%2C A subunit gene gene752 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0727 Sgly_0728 Sgly_0728 Sgly_0728 715688 717136 + aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B COGs: COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog)~HAMAP: Glutamyl-tRNA(Gln) amidotransferase%2C B subunit~InterPro IPR006075: IPR018027: IPR004413~KEGG: dhd:Dhaf_1520 aspartyl/glutamyl-tRNA amidotransferase subunit B~PFAM: Glutamyl-tRNA(Gln) amidotransferase%2C subunit B/E%2C N-terminal%3B Asn/Gln amidotransferase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase%2C B subunit~PFAM: GatB/GatE catalytic domain%3B GatB domain~TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase%2C B subunit gene gene753 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0728 Sgly_0729 Sgly_0729 Sgly_0729 717208 718368 + homocitrate synthase COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase~InterPro IPR000891: IPR013477~KEGG: chy:CHY_1104 trans-homoaconitate synthase~PFAM: Pyruvate carboxyltransferase~PRIAM: (R)-citramalate synthase~SPTR: Homocitrate synthase%3B~TIGRFAM: Homocitrate synthase NifV-type~PFAM: HMGL-like~TIGRFAM: homocitrate synthase NifV gene gene754 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0729 Sgly_0730 Sgly_0730 Sgly_0730 718365 719045 + Abortive infection protein InterPro IPR003675~KEGG: dhd:Dhaf_1562 abortive infection protein~PFAM: Abortive infection protein~SPTR: Putative uncharacterized protein%3B~PFAM: CAAX amino terminal protease family gene gene755 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0730 Sgly_0731 Sgly_0731 Sgly_0731 719335 720891 + RNA methyltransferase%2C TrmA family COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase~InterPro IPR002792: IPR010280: IPR001566~KEGG: dsy:DSY3765 hypothetical protein~PFAM: Deoxyribonuclease/rho motif-related TRAM%3B (Uracil-5)-methyltransferase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: 23S rRNA methyltransferase/RumA~PFAM: tRNA (Uracil-5-)-methyltransferase%3B TRAM domain~TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA gene gene756 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0731 Sgly_0732 Sgly_0732 Sgly_0732 721123 722112 + RelA/SpoT domain protein InterPro IPR007685~KEGG: fsu:Fisuc_0324 RelA/SpoT domain protein~PFAM: RelA/SpoT~SPTR: Putative uncharacterized protein%3B~PFAM: Region found in RelA / SpoT proteins gene gene757 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0732 Sgly_0733 Sgly_0733 Sgly_0733 722406 723530 + putative inactivated transposase KEGG: ere:EUBREC_3234 putative inactivated transposase~SPTR: Transposase gene gene758 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0733 Sgly_0734 Sgly_0734 Sgly_0734 723555 724673 + pseudogene gene759 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0734 Sgly_0735 Sgly_0735 Sgly_0735 724645 725910 + RHS repeat-associated core domain protein InterPro IPR006530~KEGG: dae:Dtox_0874 YD repeat protein~SPTR: YD repeat protein%3B~TIGRFAM: RHS repeat-associated core domain%3B YD repeat~PFAM: RHS Repeat~TIGRFAM: RHS repeat-associated core domain%3B YD repeat (two copies) gene gene760 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0735 Sgly_0736 Sgly_0736 Sgly_0736 725930 726742 + hypothetical protein KEGG: ccb:Clocel_2707 hypothetical protein~SPTR: Putative uncharacterized protein gene gene761 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0736 Sgly_0737 Sgly_0737 Sgly_0737 727031 728266 + transposase mutator type COGs: COG3328 Transposase and inactivated derivatives~InterPro IPR001207~KEGG: nth:Nther_1079 transposase mutator type~PFAM: Transposase%2C mutator type~SPTR: Transposase%3B~PFAM: Transposase%2C Mutator family gene gene762 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0737 Sgly_0738 Sgly_0738 Sgly_0738 728400 729408 - transposase IS3/IS911 family protein InterPro IPR002514~KEGG: cth:Cthe_2772 transposase IS3/IS911~PFAM: Transposase IS3/IS911~SPTR: Transposase IS3/IS911%3B~manually curated~PFAM: Integrase core domain%3B Transposase gene gene763 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0738 Sgly_0739 Sgly_0739 Sgly_0739 729433 730057 + pseudogene gene764 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0739 Sgly_0740 Sgly_0740 Sgly_0740 730268 730906 + histidine kinase COGs: COG4585 Signal transduction histidine kinase~InterPro IPR003594~KEGG: dsy:DSY2026 hypothetical protein~PFAM: ATPase-like%2C ATP-binding domain~SMART: ATPase-like%2C ATP-binding domain~SPTR: Putative uncharacterized protein%3B~PFAM: Histidine kinase%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase gene gene765 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0740 Sgly_0741 Sgly_0741 Sgly_0741 731174 731857 + two component transcriptional regulator%2C LuxR family COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain~InterPro IPR001789: IPR000792~KEGG: dsy:DSY2018 hypothetical protein~PFAM: Signal transduction response regulator%2C receiver domain%3B Transcription regulator LuxR%2C C-terminal~SMART: Transcription regulator LuxR%2C C-terminal%3B Signal transduction response regulator%2C receiver domain~SPTR: Putative uncharacterized protein%3B~PFAM: Response regulator receiver domain%3B Bacterial regulatory proteins%2C luxR family gene gene766 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0741 Sgly_0742 Sgly_0742 Sgly_0742 732394 733109 + pseudogene gene767 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0742 Sgly_0743 Sgly_0743 Sgly_0743 733165 733404 - pseudogene gene768 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0743 Sgly_0744 Sgly_0744 Sgly_0744 733503 734058 - pseudogene gene769 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0744 Sgly_0745 Sgly_0745 Sgly_0745 734963 735196 + hypothetical protein gene gene770 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0745 Sgly_0746 Sgly_0746 Sgly_0746 735174 735953 - phage repressor like transcriptional regulator%2C XRE family COGs: COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidase)~InterPro IPR001387: IPR019759: IPR006200~KEGG: dhd:Dhaf_2719 SOS-response transcriptional repressor%2C LexA~PFAM: Peptidase S24/S26A/S26B%2C conserved region%3B Helix-turn-helix type 3~SPTR: LexA repressor%3B~TIGRFAM: Peptidase S24%2C LexA repressor~PFAM: Helix-turn-helix%3B Peptidase S24-like~TIGRFAM: SOS regulatory protein LexA gene gene771 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0746 Sgly_0747 Sgly_0747 Sgly_0747 736346 736726 + hypothetical protein KEGG: mbu:Mbur_0635 ABC transporter%2C inner membrane subunit~SPTR: Putative uncharacterized protein gene gene772 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0747 Sgly_0748 Sgly_0748 Sgly_0748 736749 736946 + putative phage regulatory protein KEGG: dhd:Dhaf_4545 putative phage regulatory protein~SPTR: Putative uncharacterized protein gene gene773 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0748 Sgly_0749 Sgly_0749 Sgly_0749 736961 737272 + hypothetical protein KEGG: ehi:EHI_093850 Viral A-type inclusion protein repeat~SPTR: Viral A-type inclusion protein repeat%2C putative gene gene774 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0749 Sgly_0750 Sgly_0750 Sgly_0750 737341 739392 + Transposase-like Mu InterPro IPR001584: IPR015378~KEGG: amt:Amet_0388 transposase~PFAM: Transposase-like%2C Mu%2C C-terminal%3B Integrase%2C catalytic core~SPTR: Transposase%3B~PFAM: Mu transposase%2C C-terminal%3B Bacteriophage Mu transposase gene gene775 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0750 Sgly_0751 Sgly_0751 Sgly_0751 739408 740364 + transcriptional regulator%2C XRE family COGs: COG2842 Uncharacterized ATPase putative transposase~InterPro IPR001387~KEGG: amt:Amet_4393 hypothetical protein~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3~SPTR: Putative uncharacterized protein%3B~PFAM: Helix-turn-helix gene gene776 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0751 Sgly_0752 Sgly_0752 Sgly_0752 740376 740531 + hypothetical protein KEGG: dae:Dtox_4212 hypothetical protein~SPTR: Putative uncharacterized protein gene gene777 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0752 Sgly_0753 Sgly_0753 Sgly_0753 740524 740943 + hypothetical protein KEGG: dsy:DSY2188 hypothetical protein~SPTR: Putative bacteriocin ABC transporter gene gene778 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0753 Sgly_0754 Sgly_0754 Sgly_0754 740943 741287 + hypothetical protein KEGG: bcu:BCAH820_4401 hypothetical protein~SPTR: Putative uncharacterized protein gene gene779 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0754 Sgly_0755 Sgly_0755 Sgly_0755 741293 741568 + hypothetical protein KEGG: cph:Cpha266_0408 ECF subfamily RNA polymerase sigma-24 factor~SPTR: Predicted protein gene gene780 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0755 Sgly_0756 Sgly_0756 Sgly_0756 741582 742460 + cell wall hydrolase/autolysin COGs: COG0860 N-acetylmuramoyl-L-alanine amidase~InterPro IPR002508~KEGG: bld:BLi01974 CwlC~PFAM: Cell wall hydrolase/autolysin%2C catalytic~SMART: Cell wall hydrolase/autolysin%2C catalytic~SPTR: CwlC%3B~PFAM: N-acetylmuramoyl-L-alanine amidase gene gene781 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0756 Sgly_0757 Sgly_0757 Sgly_0757 742457 742657 + hypothetical protein KEGG: tcr:509429.190 hypothetical protein gene gene782 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0757 Sgly_0758 Sgly_0758 Sgly_0758 742672 742842 + hypothetical protein gene gene783 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0758 Sgly_0759 Sgly_0759 Sgly_0759 742826 743086 + transcriptional regulator/antitoxin%2C MazE KEGG: amt:Amet_4389 transcriptional regulator/antitoxin%2C MazE~SPTR: Transcriptional regulator/antitoxin%2C MazE gene gene784 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0759 Sgly_0760 Sgly_0760 Sgly_0760 743079 743744 + hypothetical protein KEGG: amt:Amet_4388 hypothetical protein~SPTR: Putative uncharacterized protein gene gene785 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0760 Sgly_0761 Sgly_0761 Sgly_0761 743746 744180 + hypothetical protein KEGG: amt:Amet_4387 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1018) gene gene786 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0761 Sgly_0762 Sgly_0762 Sgly_0762 744229 744540 + Mor transcription activator domain protein COGs: COG5566 conserved hypothetical protein~InterPro IPR014875~KEGG: dbr:Deba_3275 Mor transcription activator domain protein~PFAM: Mor transcription activator~SPTR: Predicted protein%3B~PFAM: Mor transcription activator family gene gene787 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0762 Sgly_0763 Sgly_0763 Sgly_0763 744737 745186 + hypothetical protein KEGG: amt:Amet_4372 hypothetical protein~SPTR: Putative uncharacterized protein gene gene788 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0763 Sgly_0764 Sgly_0764 Sgly_0764 745201 745527 + hypothetical protein KEGG: amt:Amet_4371 hypothetical protein~SPTR: Putative uncharacterized protein gene gene789 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0764 Sgly_0765 Sgly_0765 Sgly_0765 745529 745822 + hypothetical protein KEGG: amt:Amet_4370 hypothetical protein~SPTR: Putative uncharacterized protein gene gene790 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0765 Sgly_0766 Sgly_0766 Sgly_0766 745830 746390 + hypothetical protein KEGG: amt:Amet_1950 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF3486) gene gene791 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0766 Sgly_0767 Sgly_0767 Sgly_0767 746383 748038 + hypothetical protein COGs: COG5525 Bacteriophage tail assembly protein~KEGG: dal:Dalk_4561 bacteriophage tail assembly protein-like protein~SPTR: Bacteriophage tail assembly protein-like protein%3B~PFAM: Phage terminase large subunit (GpA) gene gene792 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0767 Sgly_0768 Sgly_0768 Sgly_0768 748052 749311 + hypothetical protein KEGG: dap:Dacet_2219 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF935) gene gene793 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0768 Sgly_0769 Sgly_0769 Sgly_0769 749301 750128 + phage head morphogenesis protein%2C SPP1 gp7 family InterPro IPR006528~KEGG: npu:Npun_R2610 SPP1 family phage head morphogenesis protein~PFAM: Phage putative head morphogenesis protein%2C SPP1 gp7~SPTR: Phage putative head morphogenesis protein%2C SPP1 gp7 family%3B~TIGRFAM: Phage putative head morphogenesis protein%2C SPP1 gp7~PFAM: Phage Mu protein F like protein~TIGRFAM: phage putative head morphogenesis protein%2C SPP1 gp7 family gene gene794 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0769 Sgly_0770 Sgly_0770 Sgly_0770 750150 751154 + hypothetical protein KEGG: cjr:CJE0244 Mu-like prophage I protein%2C putative~SPTR: Putative uncharacterized protein%3B~PFAM: Mu-like prophage I protein gene gene795 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0770 Sgly_0771 Sgly_0771 Sgly_0771 751168 751539 + hypothetical protein KEGG: phu:Phum_PHUM135300 hypothetical protein~SPTR: Toxin-antitoxin system%2C toxin component%2C RelE family gene gene796 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0771 Sgly_0772 Sgly_0772 Sgly_0772 751699 753030 + hypothetical protein KEGG: ljo:LJ0314 Lj965 prophage major head protein~SPTR: Putative uncharacterized protein gene gene797 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0772 Sgly_0773 Sgly_0773 Sgly_0773 753088 753516 + hypothetical protein KEGG: sfu:Sfum_1884 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1320) gene gene798 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0773 Sgly_0774 Sgly_0774 Sgly_0774 753513 754109 + hypothetical protein COGs: COG5005 Mu-like prophage protein gpG~KEGG: btr:Btr_2621 hypothetical protein~SPTR: Phage virion morphogenesis protein%3B~PFAM: Phage virion morphogenesis family~TIGRFAM: phage virion morphogenesis (putative tail completion) protein gene gene799 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0774 Sgly_0775 Sgly_0775 Sgly_0775 754111 754584 + hypothetical protein KEGG: sss:SSUSC84_0847 hypothetical protein~SPTR: Putative exported protein gene gene800 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0775 Sgly_0776 Sgly_0776 Sgly_0776 754606 756015 + hypothetical protein COGs: COG3497 Phage tail sheath protein FI~KEGG: cfl:Cfla_2260 tail sheath protein~SPTR: Tail sheath protein%3B~PFAM: Phage tail sheath protein gene gene801 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0776 Sgly_0777 Sgly_0777 Sgly_0777 756028 756297 + hypothetical protein KEGG: emi:Emin_1484 electron transfer flavoprotein alpha subunit~SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein gene gene802 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0777 Sgly_0778 Sgly_0778 Sgly_0778 756275 756709 + hypothetical protein KEGG: hau:Haur_1774 hypothetical protein~SPTR: Putative uncharacterized protein gene gene803 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0778 Sgly_0779 Sgly_0779 Sgly_0779 756730 757068 + hypothetical protein KEGG: erg:ERGA_CDS_08480 putative protease~SPTR: Hypothetical zinc protease gene gene804 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0779 Sgly_0780 Sgly_0780 Sgly_0780 757263 757490 - hypothetical protein KEGG: cfa:478563 solute carrier family 9%2C member 10~SPTR: Inositolphosphorylceramide synthase gene gene805 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0780 Sgly_0781 Sgly_0781 Sgly_0781 757561 759627 + phage tail tape measure protein%2C TP901 family InterPro IPR010090~KEGG: lmy:LM5923_1317 hypothetical protein~PFAM: Phage tail tape measure protein TP901%2C core region~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Phage tail tape measure protein TP901%2C core region~PFAM: Phage-related minor tail protein~TIGRFAM: phage tail tape measure protein%2C TP901 family%2C core region gene gene806 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0781 Sgly_0782 Sgly_0782 Sgly_0782 759650 760219 + Peptidoglycan-binding lysin domain protein InterPro IPR002482: IPR018392~KEGG: dhd:Dhaf_1417 peptidoglycan-binding LysM~PFAM: Peptidoglycan-binding lysin domain~SMART: Peptidoglycan-binding Lysin subgroup~SPTR: Putative uncharacterized protein%3B~PFAM: LysM domain gene gene807 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0782 Sgly_0783 Sgly_0783 Sgly_0783 760231 761295 + hypothetical protein KEGG: bgl:bglu_1g20340 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Phage late control gene D protein (GPD) gene gene808 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0783 Sgly_0784 Sgly_0784 Sgly_0784 761319 761582 + putative phage baseplate assembly protein V KEGG: cbt:CLH_1713 putative phage baseplate assembly protein V~SPTR: Putative phage baseplate assembly protein V%3B~PFAM: Phage-related baseplate assembly protein gene gene809 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0784 Sgly_0785 Sgly_0785 Sgly_0785 761594 761995 + GPW/gp25 family protein InterPro IPR007048~KEGG: mpd:MCP_0320 hypothetical protein~PFAM: GPW/gp25~SPTR: Gp14.1%3B~PFAM: Gene 25-like lysozyme gene gene810 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0785 Sgly_0786 Sgly_0786 Sgly_0786 761985 763094 + Baseplate J family protein COGs: COG3299 Uncharacterized homolog of phage Mu protein gp47~InterPro IPR006949~KEGG: gym:GYMC10_5392 baseplate J family protein~PFAM: Baseplate assembly protein J-like%2C predicted~SPTR: Baseplate J family protein%3B~PFAM: Baseplate J-like protein gene gene811 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0786 Sgly_0787 Sgly_0787 Sgly_0787 763087 763632 + hypothetical protein KEGG: gym:GYMC10_5391 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterized protein conserved in bacteria (DUF2313) gene gene812 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0787 Sgly_0788 Sgly_0788 Sgly_0788 763647 765185 + hypothetical protein KEGG: afl:Aflv_0675 phage-related putative tail protein~SPTR: Phage-related putative tail protein gene gene813 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0788 Sgly_0789 Sgly_0789 Sgly_0789 765185 765517 + hypothetical protein KEGG: sec:SC0572 phosphoribosylaminoimidazole carboxylase ATPase subunit~SPTR: Phosphoribosylaminoimidazole carboxylase AIR carboxylase%2C CO(2)-fixing subunit gene gene814 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0789 Sgly_0790 Sgly_0790 Sgly_0790 765517 765654 + hypothetical protein KEGG: ppe:PEPE_0804 hypothetical protein~SPTR: Phage uncharacterised protein (Phage_XkdX)%3B~PFAM: Phage uncharacterised protein (Phage_XkdX)~TIGRFAM: phage uncharacterized protein%2C XkdX family gene gene815 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0790 Sgly_0791 Sgly_0791 Sgly_0791 765879 766037 + hypothetical protein KEGG: shl:Shal_0840 LuxR family transcriptional regulator~SPTR: Putative uncharacterized protein gene gene816 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0791 Sgly_0792 Sgly_0792 Sgly_0792 766248 766478 + pseudogene gene817 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0792 Sgly_0793 Sgly_0793 Sgly_0793 766480 766653 + pseudogene gene818 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0793 Sgly_0794 Sgly_0794 Sgly_0794 766747 767190 + GCN5-related N-acetyltransferase InterPro IPR000182~KEGG: cbe:Cbei_3943 GCN5-related N-acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: GCN5-related N-acetyltransferase%3B~PFAM: Acetyltransferase (GNAT) family gene gene819 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0794 Sgly_0795 Sgly_0795 Sgly_0795 767367 767492 + pseudogene gene820 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0795 Sgly_0796 Sgly_0796 Sgly_0796 767535 767816 - addiction module toxin%2C RelE/StbE family COGs: COG3041 conserved hypothetical protein~InterPro IPR007712: IPR012753~KEGG: clo:HMPREF0868_1572 toxin-antitoxin system%2C toxin component%2C RelE family~PFAM: Plasmid stabilisation system~SPTR: Toxin-antitoxin system%2C toxin component%2C RelE family%3B~TIGRFAM: Addiction module toxin%2C RelE/StbE~PFAM: Plasmid stabilisation system protein~TIGRFAM: addiction module toxin component%2C YafQ family%3B addiction module toxin%2C RelE/StbE family gene gene821 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0796 Sgly_0797 Sgly_0797 Sgly_0797 767813 768091 - addiction module antitoxin%2C RelB/DinJ family COGs: COG3077 DNA-damage-inducible protein J~InterPro IPR007337~KEGG: cdl:CDR20291_1760 addiction module antitoxin%2C RelB/DinJ family~PFAM: RelB antitoxin~SPTR: Putative uncharacterized protein%3B~TIGRFAM: RelB antitoxin~PFAM: RelB antitoxin~TIGRFAM: addiction module antitoxin%2C RelB/DinJ family gene gene822 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0797 Sgly_0798 Sgly_0798 Sgly_0798 768370 768789 - pseudogene gene823 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0798 Sgly_0799 Sgly_0799 Sgly_0799 768894 769715 + transcriptional regulator%2C MerR family COGs: COG0789 transcriptional regulator protein~InterPro IPR000551: IPR010499~KEGG: amt:Amet_4423 MerR family transcriptional regulator~PFAM: HTH transcriptional regulator%2C MerR%3B Bacterial transcription activator%2C effector binding~SMART: HTH transcriptional regulator%2C MerR~SPTR: Transcriptional regulator%2C MerR family%3B~PFAM: MerR family regulatory protein%3B Bacterial transcription activator%2C effector binding domain gene gene824 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0799 Sgly_0800 Sgly_0800 Sgly_0800 769948 770274 + nitrogen regulatory protein P-II COGs: COG0347 Nitrogen regulatory protein PII~InterPro IPR002187~KEGG: sfu:Sfum_1018 nitrogen regulatory protein P-II~PFAM: Nitrogen regulatory protein PII~SPTR: Nitrogen regulatory protein P-II%3B~PFAM: Nitrogen regulatory protein P-II gene gene825 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0800 Sgly_0801 Sgly_0801 Sgly_0801 770302 770658 + nitrogen regulatory protein P-II COGs: COG0347 Nitrogen regulatory protein PII~InterPro IPR002187~KEGG: ccb:Clocel_2834 nitrogen regulatory protein P-II~PFAM: Nitrogen regulatory protein PII~SPTR: Nitrogen regulatory protein P-II%3B~PFAM: Nitrogen regulatory protein P-II gene gene826 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0801 Sgly_0802 Sgly_0802 Sgly_0802 770747 771799 + aliphatic sulfonates family ABC transporter%2C periplasmic ligand-binding protein COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components~InterPro IPR010067~KEGG: tjr:TherJR_0600 aliphatic sulfonates family ABC transporter%2C periplasmic ligand-binding protein~SPTR: Aliphatic sulfonates family ABC transporter%2C periplasmic ligand-binding protein%3B~TIGRFAM: ABC transporter%2C substrate-binding protein%2C aliphatic sulphonates~PFAM: NMT1/THI5 like~TIGRFAM: ABC transporter%2C substrate-binding protein%2C aliphatic sulfonates family gene gene827 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0802 Sgly_0803 Sgly_0803 Sgly_0803 771815 772606 + binding-protein-dependent transport systems inner membrane component COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component~InterPro IPR000515~KEGG: tjr:TherJR_0601 binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Binding-protein-dependent transport systems inner membrane component%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene828 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0803 Sgly_0804 Sgly_0804 Sgly_0804 772607 773446 + Taurine-transporting ATPase COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: tjr:TherJR_0602 ABC transporter related protein~PFAM: ABC transporter-like~PRIAM: Taurine-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related protein%3B~PFAM: ABC transporter gene gene829 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0804 Sgly_0805 Sgly_0805 Sgly_0805 773633 774370 + urea carboxylase-associated protein 2 COGs: COG3665 conserved hypothetical protein~InterPro IPR018959: IPR017792~KEGG: pjd:Pjdr2_2803 UreA carboxylase-associated protein 2~PFAM: Domain of unknown function DUF1989~SPTR: Urea carboxylase-associated protein 2%3B~TIGRFAM: Urea carboxylase-associated protein 2~PFAM: Domain of unknown function (DUF1989)~TIGRFAM: urea carboxylase-associated protein 2 gene gene830 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0805 Sgly_0806 Sgly_0806 Sgly_0806 774461 775114 + urea carboxylase-associated protein 1 COGs: COG3665 conserved hypothetical protein~InterPro IPR018959: IPR017791~KEGG: pjd:Pjdr2_2804 UreA carboxylase-associated protein 1~PFAM: Domain of unknown function DUF1989~SPTR: Urea carboxylase-associated protein 1%3B~TIGRFAM: Urea carboxylase-associated protein 1~PFAM: Domain of unknown function (DUF1989)~TIGRFAM: urea carboxylase-associated protein 1 gene gene831 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0806 Sgly_0807 Sgly_0807 Sgly_0807 775128 778772 + urea carboxylase COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit~InterPro IPR003778: IPR003833: IPR005481: IPR005479: IPR 005482: IPR000089: IPR014084~KEGG: pjd:Pjdr2_2805 UreA carboxylase~PFAM: Allophanate hydrolase subunit 2%3B Carbamoyl phosphate synthetase%2C large subunit%2C ATP-binding%3B Carbamoyl phosphate synthase%2C large subunit%2C N-terminal%3B Biotin carboxylase%2C C-terminal%3B Allophanate hydrolase subunit 1%3B Biotin/lipoyl attachment~PRIAM: Urea carboxylase~SMART: Allophanate hydrolase subunit 2%3B Allophanate hydrolase subunit 1~SPTR: Urea carboxylase%3B~TIGRFAM: Urea carboxylase%3B Allophanate hydrolase subunit 2~PFAM: Carbamoyl-phosphate synthase L chain%2C ATP binding domain%3B Biotin carboxylase C-terminal domain%3B Allophanate hydrolase subunit 2%3B Allophanate hydrolase subunit 1%3B Carbamoyl-phosphate synthase L chain%2C N-terminal domain%3B Biotin-requiring enzyme~TIGRFAM: urea carboxylase%3B biotin-dependent carboxylase uncharacterized domain gene gene832 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0807 Sgly_0808 Sgly_0808 Sgly_0808 778814 780157 + Allophanate hydrolase COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase~InterPro IPR000120~KEGG: pjd:Pjdr2_2806 allophanate hydrolase~PFAM: Amidase~PRIAM: Allophanate hydrolase~SPTR: Allophanate hydrolase%3B~PFAM: Amidase~TIGRFAM: allophanate hydrolase gene gene833 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0808 Sgly_0809 Sgly_0809 Sgly_0809 780241 780801 + BioY protein COGs: COG1268 conserved hypothetical protein~InterPro IPR003784~KEGG: sta:STHERM_c14470 biotin synthesis protein BioY~PFAM: BioY protein~SPTR: BioY protein%3B~PFAM: BioY family gene gene834 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0809 Sgly_0810 Sgly_0810 Sgly_0810 780816 781568 + Polyamine-transporting ATPase COGs: COG1122 ABC-type cobalt transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: dal:Dalk_0378 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Polyamine-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related%3B~PFAM: ABC transporter~TIGRFAM: cobalt transport protein ATP-binding subunit gene gene835 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0810 Sgly_0811 Sgly_0811 Sgly_0811 781556 782320 + cobalt transport protein COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter~InterPro IPR003339~KEGG: dal:Dalk_0379 cobalt transport protein~PFAM: Cobalt transport protein~SPTR: Cobalt transport protein%3B~PFAM: Cobalt transport protein gene gene836 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0811 Sgly_0812 Sgly_0812 Sgly_0812 782332 783330 + biotin/acetyl-CoA-carboxylase ligase COGs: COG0340 Biotin-(acetyl-CoA carboxylase) ligase~InterPro IPR004143: IPR004408~KEGG: cpf:CPF_0664 BirA bifunctional protein~PFAM: Biotin/lipoate A/B protein ligase~SPTR: BirA bifunctional protein%3B~TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase~PFAM: HTH domain%3B Biotin/lipoate A/B protein ligase family~TIGRFAM: birA%2C biotin-[acetyl-CoA-carboxylase] ligase region%3B BirA biotin operon repressor domain gene gene837 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0812 Sgly_0813 Sgly_0813 Sgly_0813 783414 784949 + ATPase associated with various cellular activities AAA_5 COGs: COG5271 AAA ATPase containing von Willebrand factor type A (vWA) domain~InterPro IPR011704~KEGG: apr:Apre_0603 ATPase associated with various cellular activities AAA_5~PFAM: ATPase%2C AAA-5~SPTR: Possible nitric oxide reductase%3B~PFAM: AAA domain (dynein-related subfamily) gene gene838 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0813 Sgly_0814 Sgly_0814 Sgly_0814 784979 786868 + hypothetical protein KEGG: amt:Amet_1900 hypothetical protein~SPTR: Putative uncharacterized protein gene gene839 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0814 Sgly_0815 Sgly_0815 Sgly_0815 786876 787049 + hypothetical protein gene gene840 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0815 Sgly_0816 Sgly_0816 Sgly_0816 787130 788602 + hypothetical protein KEGG: psa:PST_1420 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF3375) gene gene841 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0816 Sgly_0817 Sgly_0817 Sgly_0817 788627 789235 + hypothetical protein KEGG: sus:Acid_1049 hypothetical protein~SPTR: Putative uncharacterized protein gene gene842 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0817 Sgly_0818 Sgly_0818 Sgly_0818 789232 792636 + putative cytoplasmic protein COGs: COG4913 conserved hypothetical protein~KEGG: sat:SYN_01817 putative cytoplasmic protein~SPTR: Hypothetical cytosolic protein gene gene843 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0818 Sgly_0819 Sgly_0819 Sgly_0819 792617 793795 + hypothetical protein COGs: COG4924 conserved hypothetical protein~KEGG: aeh:Mlg_2293 hypothetical protein~SPTR: Conserved hypothetical cytosolic protein%3B~PFAM: Uncharacterized protein conserved in bacteria N-term (DUF3322)%3B Uncharacterized protein conserved in bacteria C-term(DUF2220) gene gene844 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0819 Sgly_0820 Sgly_0820 Sgly_0820 793969 794157 - pseudogene gene845 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0820 Sgly_0821 Sgly_0821 Sgly_0821 794248 794451 + regulatory protein TetR InterPro IPR001647~KEGG: cbe:Cbei_3861 TetR family transcriptional regulator~PFAM: Transcription regulator%2C TetR-like%2C DNA-binding%2C bacterial/archaeal~SPTR: Transcriptional regulator%2C TetR family%3B~PFAM: Bacterial regulatory proteins%2C tetR family gene gene846 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0821 Sgly_0822 Sgly_0822 Sgly_0822 794625 795020 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog~InterPro IPR007627: IPR014284~KEGG: ckr:CKR_0055 hypothetical protein~PFAM: RNA polymerase sigma-70 region 2~SPTR: Putative uncharacterized protein%3B~TIGRFAM: RNA polymerase sigma-70~PFAM: Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family gene gene847 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0822 Sgly_0823 Sgly_0823 Sgly_0823 795084 795270 + pseudogene gene848 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0823 Sgly_0824 Sgly_0824 Sgly_0824 795272 795664 + hypothetical protein KEGG: cpy:Cphy_1606 hypothetical protein~SPTR: Putative uncharacterized protein gene gene849 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0824 Sgly_0825 Sgly_0825 Sgly_0825 795881 797164 + 4Fe-4S ferredoxin iron-sulfur binding domain protein KEGG: dhd:Dhaf_2122 4Fe-4S ferredoxin iron-sulfur binding domain protein~SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein gene gene850 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0825 Sgly_0826 Sgly_0826 Sgly_0826 797278 797709 + hypothetical protein KEGG: sss:SSUSC84_1333 putative lipoprotein~SPTR: Putative uncharacterized protein gene gene851 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0826 Sgly_0827 Sgly_0827 Sgly_0827 798290 799423 + hypothetical protein KEGG: hmo:HM1_1572 hypothetical protein~SPTR: Putative uncharacterized protein gene gene852 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0827 Sgly_0828 Sgly_0828 Sgly_0828 799594 800070 + hypothetical protein KEGG: cdl:CDR20291_2961 hypothetical protein~SPTR: Putative uncharacterized protein gene gene853 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0828 Sgly_0829 Sgly_0829 Sgly_0829 800484 801110 + Methyltransferase type 11 COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis~InterPro IPR013216~KEGG: dhd:Dhaf_1589 methyltransferase type 11~PFAM: Methyltransferase type 11~SPTR: Putative uncharacterized protein%3B~PFAM: Methyltransferase domain gene gene854 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0829 Sgly_0830 Sgly_0830 Sgly_0830 801351 801995 - ABC transporter related protein COGs: COG1131 ABC-type multidrug transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: cpr:CPR_0053 antibiotic ABC transporter%2C ATP-binding protein~PFAM: ABC transporter-like~SMART: ATPase%2C AAA+ type%2C core~SPTR: Bacitracin transport ATP-binding protein BcrA%3B~PFAM: ABC transporter gene gene855 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0830 Sgly_0831 Sgly_0831 Sgly_0831 802019 802771 - hypothetical protein KEGG: cpr:CPR_0052 hypothetical protein~SPTR: Putative membrane protein gene gene856 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0831 Sgly_0832 Sgly_0832 Sgly_0832 802774 803580 - hypothetical protein KEGG: cpr:CPR_0051 hypothetical protein~SPTR: Putative membrane protein gene gene857 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0832 Sgly_0833 Sgly_0833 Sgly_0833 803564 804364 - hypothetical protein KEGG: cpr:CPR_0050 hypothetical protein~SPTR: Putative uncharacterized protein gene gene858 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0833 Sgly_0834 Sgly_0834 Sgly_0834 804450 804750 + pseudogene gene859 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0834 Sgly_0835 Sgly_0835 Sgly_0835 804831 804986 + hypothetical protein gene gene860 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0835 Sgly_0836 Sgly_0836 Sgly_0836 805133 805540 - hypothetical protein KEGG: pzu:PHZ_c0526 hypothetical protein~SPTR: Putative uncharacterized protein gene gene861 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0836 Sgly_0837 Sgly_0837 Sgly_0837 806051 806701 - two component transcriptional regulator%2C LuxR family COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain~InterPro IPR001789: IPR000792~KEGG: pjd:Pjdr2_1033 two component transcriptional regulator%2C LuxR family~PFAM: Signal transduction response regulator%2C receiver domain%3B Transcription regulator LuxR%2C C-terminal~SMART: Signal transduction response regulator%2C receiver domain%3B Transcription regulator LuxR%2C C-terminal~SPTR: Two component transcriptional regulator%2C LuxR family%3B~PFAM: Response regulator receiver domain%3B Bacterial regulatory proteins%2C luxR family gene gene862 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0837 Sgly_0838 Sgly_0838 Sgly_0838 806717 809059 - putative signal transduction histidine kinase COGs: COG4585 Signal transduction histidine kinase~InterPro IPR003594~KEGG: pjd:Pjdr2_1032 histidine kinase~PFAM: ATPase-like%2C ATP-binding domain~SMART: ATPase-like%2C ATP-binding domain~SPTR: Histidine kinase%3B~PFAM: Histidine kinase%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase gene gene863 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0838 Sgly_0839 Sgly_0839 Sgly_0839 809121 809282 - DNA-directed RNA polymerase specialized sigma factor%2C ComX KEGG: afl:Aflv_0548 DNA-directed RNA polymerase specialized sigma factor%2C ComX~SPTR: DNA-directed RNA polymerase specialized sigma factor%2C ComX%3B~PFAM: Bacillus competence pheromone ComX gene gene864 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0839 Sgly_0840 Sgly_0840 Sgly_0840 809393 810307 - Polyprenyl synthetase COGs: COG0142 Geranylgeranyl pyrophosphate synthase~InterPro IPR000092~KEGG: pjd:Pjdr2_1029 polyprenyl synthetase~PFAM: Polyprenyl synthetase~SPTR: Polyprenyl synthetase%3B~PFAM: Polyprenyl synthetase gene gene865 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0840 Sgly_0841 Sgly_0841 Sgly_0841 810490 810708 + pseudogene gene866 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0841 Sgly_0842 Sgly_0842 Sgly_0842 810769 815085 - amino acid adenylation domain protein COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein~InterPro IPR001242: IPR000873: IPR006163: IPR013120: IPR 010071: IPR010080~KEGG: bcg:BCG9842_B4376 linear gramicidin synthetase subunit D~PFAM: AMP-dependent synthetase/ligase%3B Condensation domain%3B Phosphopantetheine-binding%3B Male sterility%2C NAD-binding~PRIAM: Phenylalanine racemase (ATP-hydrolyzing).%2C Steroid Delta-isomerase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Amino acid adenylation%3B Thioester reductase~PFAM: Male sterility protein%3B Phosphopantetheine attachment site%3B AMP-binding enzyme%3B Condensation domain~TIGRFAM: amino acid adenylation domain%3B thioester reductase domain gene gene867 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0842 Sgly_0843 Sgly_0843 Sgly_0843 815276 817216 - integral membrane sensor hybrid histidine kinase COGs: COG5002 Signal transduction histidine kinase~InterPro IPR003661: IPR003594: IPR001789~KEGG: afw:Anae109_2929 PAS/PAC sensor hybrid histidine kinase~PFAM: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain%3B Signal transduction response regulator%2C receiver domain~SMART: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain%3B Signal transduction response regulator%2C receiver domain~SPTR: PAS/PAC sensor hybrid histidine kinase%3B~PFAM: Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B Response regulator receiver domain%3B His Kinase A (phosphoacceptor) domain gene gene868 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0843 Sgly_0844 Sgly_0844 Sgly_0844 817525 818106 + hypothetical protein KEGG: cbe:Cbei_1925 hypothetical protein~SPTR: Putative uncharacterized protein gene gene869 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0844 Sgly_0845 Sgly_0845 Sgly_0845 818911 820710 + N-6 DNA methylase COGs: COG0286 Type I restriction-modification system methyltransferase subunit~InterPro IPR003356~KEGG: dol:Dole_0276 N-6 DNA methylase~PFAM: DNA methylase%2C adenine-specific~SPTR: Type I restriction-modification%3B~PFAM: N-6 DNA Methylase%3B HsdM N-terminal domain~TIGRFAM: type I restriction system adenine methylase (hsdM) gene gene870 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0845 Sgly_0846 Sgly_0846 Sgly_0846 820707 822038 + restriction modification system DNA specificity domain protein COGs: COG0732 Restriction endonuclease S subunits~InterPro IPR000055~KEGG: mba:Mbar_A1015 hypothetical protein~PFAM: Restriction endonuclease%2C type I%2C S subunit%2C EcoBI~SPTR: Putative uncharacterized protein%3B~PFAM: Type I restriction modification DNA specificity domain gene gene871 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0846 Sgly_0847 Sgly_0847 Sgly_0847 822042 823058 + hypothetical protein KEGG: bmj:BMULJ_03750 hypothetical protein~SPTR: Putative uncharacterized protein gene gene872 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0847 Sgly_0848 Sgly_0848 Sgly_0848 823055 826045 + type III restriction protein res subunit COGs: COG0610 Type I site-specific restriction-modification system R (restriction) subunit and related helicase~InterPro IPR014001: IPR007409: IPR006935~KEGG: nth:Nther_0797 protein of unknown function DUF450~PFAM: Restriction endonuclease%2C type I%2C R subunit/Type III%2C Res subunit%3B Restriction endonuclease%2C type I%2C EcoRI%2C R subunit/Type III%2C Res subunit%2C N-terminal~SMART: DEAD-like helicase%2C N-terminal~SPTR: DEAD/DEAH box helicase%3B~PFAM: Type I restriction enzyme R protein N terminus (HSDR_N)%3B Type III restriction enzyme%2C res subunit gene gene873 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0848 Sgly_0849 Sgly_0849 Sgly_0849 826760 827218 + helix-turn-helix domain protein InterPro IPR001387~KEGG: dhd:Dhaf_4949 hypothetical protein~SMART: Helix-turn-helix type 3~SPTR: Putative uncharacterized protein gene gene874 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0849 Sgly_0850 Sgly_0850 Sgly_0850 827481 828371 + filamentation induced by cAMP protein Fic COGs: COG2184 Protein involved in cell division~InterPro IPR003812~KEGG: pph:Ppha_1247 filamentation induced by cAMP protein Fic~PFAM: Filamentation induced by cAMP/death on curing%2C related~SPTR: Cell filamentation protein%3B~PFAM: Fic/DOC family gene gene875 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0850 Sgly_0851 Sgly_0851 Sgly_0851 829022 829864 + protein of unknown function DUF1616 COGs: COG4743 membrane protein~InterPro IPR011674~KEGG: pth:PTH_0376 hypothetical protein~PFAM: Protein of unknown function DUF1616~SPTR: Predicted membrane protein%3B~PFAM: Protein of unknown function (DUF1616) gene gene876 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0851 Sgly_0852 Sgly_0852 Sgly_0852 830275 831705 + signal transduction histidine kinase regulating citrate/malate metabolism COGs: COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism~InterPro IPR003594~KEGG: dae:Dtox_3198 signal transduction histidine kinase regulating citrate/malate metabolism~PFAM: ATPase-like%2C ATP-binding domain~SMART: ATPase-like%2C ATP-binding domain~SPTR: Signal transduction histidine kinase regulating citrate/malate metabolism%3B~PFAM: Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase gene gene877 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0852 Sgly_0853 Sgly_0853 Sgly_0853 831659 832318 + Accessory gene regulator B InterPro IPR006741~KEGG: dae:Dtox_3199 accessory gene regulator B~PFAM: Accessory gene regulator B~SMART: Accessory gene regulator B~SPTR: Accessory gene regulator B%3B~PFAM: Accessory gene regulator B gene gene878 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0853 Sgly_0854 Sgly_0854 Sgly_0854 832302 832433 + hypothetical protein SPTR: Putative uncharacterized protein gene gene879 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0854 Sgly_0855 Sgly_0855 Sgly_0855 832453 833211 + two component transcriptional regulator%2C LytTR family COGs: COG3279 Response regulator of the LytR/AlgR family~InterPro IPR001789: IPR007492~KEGG: dau:Daud_0746 response regulator receiver protein~PFAM: Signal transduction response regulator%2C receiver domain%3B LytTr%2C DNA-binding domain~SMART: Signal transduction response regulator%2C receiver domain~SPTR: Response regulator receiver protein%3B~PFAM: Response regulator receiver domain%3B LytTr DNA-binding domain gene gene880 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0855 Sgly_0856 Sgly_0856 Sgly_0856 833550 834743 + geranylgeranyl reductase COGs: COG0644 Dehydrogenase (flavoprotein)~InterPro IPR002218: IPR011777~KEGG: pth:PTH_0378 dehydrogenases~PFAM: Glucose-inhibited division protein A-related~SPTR: Dehydrogenases%3B~TIGRFAM: Geranylgeranyl reductase%2C plant/prokaryotic~PFAM: FAD binding domain~TIGRFAM: geranylgeranyl reductase family gene gene881 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0856 Sgly_0857 Sgly_0857 Sgly_0857 834786 835514 + glycosyl transferase family 2 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis~InterPro IPR001173~KEGG: mtp:Mthe_1077 glycosyl transferase family protein~PFAM: Glycosyl transferase%2C family 2~SPTR: Glycosyl transferase%2C family 2%3B~PFAM: Glycosyl transferase family 2 gene gene882 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0857 Sgly_0858 Sgly_0858 Sgly_0858 835544 836719 + glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: mpd:MCP_2706 putative glycosyltransferase~PFAM: Glycosyl transferase%2C group 1~SPTR: Putative glycosyltransferase%3B~PFAM: Glycosyl transferases group 1 gene gene883 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0858 Sgly_0859 Sgly_0859 Sgly_0859 836764 837912 + Radical SAM domain protein COGs: COG0535 Fe-S oxidoreductase~InterPro IPR007197~KEGG: dak:DaAHT2_2410 radical SAM domain protein~PFAM: Radical SAM~SPTR: Radical SAM domain protein%3B~PFAM: Radical SAM superfamily gene gene884 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0859 Sgly_0860 Sgly_0860 Sgly_0860 837934 838923 + Sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) COGs: COG0451 Nucleoside-diphosphate-sugar epimerase~InterPro IPR001509~KEGG: sjp:SJA_C2-02040 oxidoreductase-like protein~PFAM: NAD-dependent epimerase/dehydratase~PRIAM: Sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating)~SPTR: Oxidoreductase-like protein%3B~PFAM: NAD dependent epimerase/dehydratase family gene gene885 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0860 Sgly_0861 Sgly_0861 Sgly_0861 838957 840216 + hypothetical protein COGs: COG2327 conserved hypothetical protein~KEGG: swo:Swol_0123 polysaccharide pyruvyl transferase~SPTR: Pyruvyl-transferase%3B~PFAM: Polysaccharide pyruvyl transferase gene gene886 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0861 Sgly_0862 Sgly_0862 Sgly_0862 840216 841943 + hypothetical protein KEGG: mpd:MCP_0891 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Predicted membrane protein (DUF2206) gene gene887 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0862 Sgly_0863 Sgly_0863 Sgly_0863 842025 843335 + multi antimicrobial extrusion protein MatE COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid~InterPro IPR002528~KEGG: det:DET0215 polysaccharide biosynthesis protein~PFAM: Multi antimicrobial extrusion protein MatE~SPTR: Polysaccharide biosynthesis protein%3B~PFAM: Polysaccharide biosynthesis protein gene gene888 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0863 Sgly_0864 Sgly_0864 Sgly_0864 843385 843930 + Protein of unknown function DUF457%2C transmembrane InterPro IPR007404~KEGG: dae:Dtox_4305 membrane-bound metal-dependent hydrolase~PFAM: Protein of unknown function DUF457%2C transmembrane~SPTR: Membrane-bound metal-dependent hydrolase%3B~PFAM: Predicted membrane-bound metal-dependent hydrolase (DUF457) gene gene889 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0864 Sgly_0865 Sgly_0865 Sgly_0865 843962 845035 + Mannose-1-phosphate guanylyltransferase COGs: COG0836 Mannose-1-phosphate guanylyltransferase~InterPro IPR005835: IPR001538~KEGG: hor:Hore_22860 mannose-1-phosphate guanylyltransferase (GDP)~PFAM: Nucleotidyl transferase%3B Mannose-6-phosphate isomerase%2C type II%2C C-terminal~PRIAM: Mannose-1-phosphate guanylyltransferase~SPTR: Mannose-1-phosphate guanylyltransferase (GDP)%3B~PFAM: Nucleotidyl transferase%3B Mannose-6-phosphate isomerase~TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase gene gene890 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0865 Sgly_0866 Sgly_0866 Sgly_0866 845050 846447 + phosphomannomutase COGs: COG1109 Phosphomannomutase~InterPro IPR005844: IPR005845: IPR005846: IPR005843~KEGG: pth:PTH_0398 phosphomannomutase~PFAM: Alpha-D-phosphohexomutase%2C alpha/beta/alpha domain II%3B Alpha-D-phosphohexomutase%2C alpha/beta/alpha domain I%3B Alpha-D-phosphohexomutase%2C alpha/beta/alpha domain III%3B Alpha-D-phosphohexomutase%2C C-terminal~SPTR: Phosphomannomutase%3B~PFAM: Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain II%3B Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain III%3B Phosphoglucomutase/phosphomannomutase%2C C-terminal domain%3B Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain I gene gene891 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0866 Sgly_0867 Sgly_0867 Sgly_0867 846484 847454 + pseudogene gene892 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0867 Sgly_0868 Sgly_0868 Sgly_0868 847486 848673 + protein of unknown function DUF214 COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component~InterPro IPR003838~KEGG: pth:PTH_0413 ABC-type transport system%2C involved in lipoprotein release%2C permeasecomponent~PFAM: Protein of unknown function DUF214%2C permase predicted~SPTR: ABC-type transport system%2C involved in lipoprotein release%2C permeasecomponent%3B~PFAM: Predicted permease gene gene893 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0868 Sgly_0869 Sgly_0869 Sgly_0869 848693 849361 + Phosphonate-transporting ATPase COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: pth:PTH_0414 peptide ABC transporter ATPase~PFAM: ABC transporter-like~PRIAM: Phosphonate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC-type antimicrobial peptide transport system%2C ATPase component%3B~PFAM: ABC transporter gene gene894 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0869 Sgly_0870 Sgly_0870 Sgly_0870 849380 849499 + hypothetical protein gene gene895 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0870 Sgly_0871 Sgly_0871 Sgly_0871 849546 849815 + hypothetical protein KEGG: pth:PTH_0420 hypothetical protein~SPTR: Hypothetical membrane protein gene gene896 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0871 Sgly_0872 Sgly_0872 Sgly_0872 850326 850698 + pseudogene gene897 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0872 Sgly_0873 Sgly_0873 Sgly_0873 850802 852535 + hypothetical protein KEGG: cce:Ccel_0962 hypothetical protein~SPTR: Putative uncharacterized protein gene gene898 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0873 Sgly_0874 Sgly_0874 Sgly_0874 852536 853864 + hypothetical protein KEGG: ljo:LJ1761 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF2791) gene gene899 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0874 Sgly_0875 Sgly_0875 Sgly_0875 853861 856026 + DEAD/DEAH box helicase domain protein COGs: COG1201 Lhr-like helicase~InterPro IPR014001: IPR001650: IPR011545~KEGG: gym:GYMC10_0223 DEAD/DEAH box helicase domain protein~PFAM: DNA/RNA helicase%2C DEAD/DEAH box type%2C N-terminal%3B DNA/RNA helicase%2C C-terminal~SMART: DEAD-like helicase%2C N-terminal%3B DNA/RNA helicase%2C C-terminal~SPTR: Putative uncharacterized protein%3B~PFAM: Helicase conserved C-terminal domain%3B DEAD/DEAH box helicase gene gene900 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0875 Sgly_0876 Sgly_0876 Sgly_0876 856097 856321 - pseudogene gene901 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0876 Sgly_0877 Sgly_0877 Sgly_0877 856439 857011 - hypothetical protein KEGG: ere:EUBREC_3646 hypothetical protein~SPTR: Putative uncharacterized protein gene gene902 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0877 Sgly_0878 Sgly_0878 Sgly_0878 857365 863718 - S-layer domain-containing protein InterPro IPR001119: IPR002479~KEGG: dhd:Dhaf_2434 cell wall/surface repeat protein~PFAM: S-layer homology domain%3B Putative cell wall binding repeat~SPTR: Peptidoglycan-binding lysin domain protein%3B~PFAM: S-layer homology domain gene gene903 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0878 Sgly_0879 Sgly_0879 Sgly_0879 863737 864099 - hypothetical protein KEGG: swd:Swoo_1457 YD repeat-containing protein~SPTR: Putative uncharacterized protein gene gene904 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0879 Sgly_0880 Sgly_0880 Sgly_0880 864250 866235 - signal transduction histidine kinase regulating citrate/malate metabolism COGs: COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism~InterPro IPR003594~KEGG: eel:EUBELI_00658 hypothetical protein~PFAM: ATPase-like%2C ATP-binding domain~SPTR: Predicted protein%3B~PFAM: Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase gene gene905 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0880 Sgly_0881 Sgly_0881 Sgly_0881 866232 866960 - two component transcriptional regulator%2C LytTR family COGs: COG3279 Response regulator of the LytR/AlgR family~InterPro IPR001789: IPR007492~KEGG: ele:Elen_1697 two component transcriptional regulator%2C LytTR family~PFAM: LytTr%2C DNA-binding domain%3B Signal transduction response regulator%2C receiver domain~SMART: Signal transduction response regulator%2C receiver domain~SPTR: Response regulator of the LytR/AlgR family%3B~PFAM: Response regulator receiver domain%3B LytTr DNA-binding domain gene gene906 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0881 Sgly_0882 Sgly_0882 Sgly_0882 866990 867163 - hypothetical protein KEGG: clj:CLJU_c27160 hypothetical protein~SPTR: Putative uncharacterized protein gene gene907 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0882 Sgly_0883 Sgly_0883 Sgly_0883 867688 868371 + two component transcriptional regulator%2C winged helix family COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR001789: IPR001867~KEGG: dsy:DSY3639 hypothetical protein~PFAM: Signal transduction response regulator%2C receiver domain%3B Signal transduction response regulator%2C C-terminal~SMART: Signal transduction response regulator%2C receiver domain~SPTR: Putative uncharacterized protein%3B~PFAM: Response regulator receiver domain%3B Transcriptional regulatory protein%2C C terminal gene gene908 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0883 Sgly_0884 Sgly_0884 Sgly_0884 868368 869474 + integral membrane sensor signal transduction histidine kinase COGs: COG0642 Signal transduction histidine kinase~InterPro IPR003661: IPR003594~KEGG: dhd:Dhaf_1741 histidine kinase~PFAM: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain~SMART: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain~SPTR: Histidine kinase%3B~PFAM: Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain gene gene909 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0884 Sgly_0885 Sgly_0885 Sgly_0885 869761 871590 - sulfatase COGs: COG1368 Phosphoglycerol transferase and related protein alkaline phosphatase superfamily~InterPro IPR000917~KEGG: dhd:Dhaf_3211 sulfatase~PFAM: Sulfatase~SPTR: Sulfatase%3B~PFAM: Sulfatase gene gene910 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0885 Sgly_0886 Sgly_0886 Sgly_0886 871869 872042 + YcfA family protein InterPro IPR012933~KEGG: npu:Npun_R4600 YcfA family protein~PFAM: YcfA-like~SPTR: YcfA family protein%3B~PFAM: YcfA-like protein gene gene911 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0886 Sgly_0887 Sgly_0887 Sgly_0887 872198 873154 + Phosphonate-transporting ATPase COGs: COG1131 ABC-type multidrug transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: dhd:Dhaf_1742 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Phosphonate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related%3B~PFAM: ABC transporter gene gene912 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0887 Sgly_0888 Sgly_0888 Sgly_0888 873151 873975 + ABC-2 type transporter InterPro IPR013525~KEGG: dhd:Dhaf_1743 ABC-2 type transporter~PFAM: ABC-2 type transporter~SPTR: Putative uncharacterized protein%3B~PFAM: ABC-2 type transporter gene gene913 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0888 Sgly_0889 Sgly_0889 Sgly_0889 874491 875084 + NAD(P)H dehydrogenase (quinone) COGs: COG2249 Putative NADPH-quinone reductase (modulator of drug activity B)~InterPro IPR003680~KEGG: ele:Elen_0321 NAD(P)H dehydrogenase (quinone)~PFAM: Flavodoxin-like fold~SPTR: NAD(P)H dehydrogenase%2C quinone family%3B~PFAM: Flavodoxin-like fold gene gene914 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0889 Sgly_0890 Sgly_0890 Sgly_0890 875135 875260 + hypothetical protein KEGG: tva:TVAG_010540 hypothetical protein~SPTR: Putative uncharacterized protein gene gene915 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0890 Sgly_0891 Sgly_0891 Sgly_0891 875550 876032 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog~InterPro IPR007627: IPR013249: IPR014284~KEGG: gym:GYMC10_0333 RNA polymerase%2C sigma-24 subunit%2C ECF subfamily~PFAM: RNA polymerase sigma factor 70%2C region 4 type 2%3B RNA polymerase sigma-70 region 2~SPTR: RNA polymerase%2C sigma-24 subunit%2C ECF subfamily%3B~TIGRFAM: RNA polymerase sigma-70~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family gene gene916 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0891 Sgly_0892 Sgly_0892 Sgly_0892 876025 877266 + hypothetical protein KEGG: gym:GYMC10_0334 hypothetical protein~SPTR: Putative uncharacterized protein gene gene917 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0892 Sgly_0893 Sgly_0893 Sgly_0893 877413 878129 + protein of unknown function DUF541 COGs: COG2968 conserved hypothetical protein~InterPro IPR007497~KEGG: dae:Dtox_1759 protein of unknown function DUF541~PFAM: Protein of unknown function DUF541~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF541) gene gene918 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0893 Sgly_0894 Sgly_0894 Sgly_0894 878578 879810 - drug resistance transporter%2C Bcr/CflA subfamily COGs: COG2814 Arabinose efflux permease~InterPro IPR011701: IPR004812~KEGG: ckr:CKR_3008 hypothetical protein~PFAM: Major facilitator superfamily MFS-1~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Drug resistance transporter Bcr/CflA subfamily~PFAM: Major Facilitator Superfamily~TIGRFAM: drug resistance transporter%2C Bcr/CflA subfamily%3B Multidrug resistance protein gene gene919 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0894 Sgly_0895 Sgly_0895 Sgly_0895 879807 879974 - hypothetical protein SPTR: Polyketide synthase/peptide synthetase gene gene920 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0895 Sgly_0896 Sgly_0896 Sgly_0896 880302 880946 + DNA-7-methylguanine glycosylase COGs: COG4912 DNA alkylation repair protein~InterPro IPR014825~KEGG: sgo:SGO_1207 DNA alkylation repair enzyme~PFAM: DNA alkylation repair enzyme~SPTR: DNA alkylation repair enzyme%3B~PFAM: DNA alkylation repair enzyme gene gene921 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0896 Sgly_0897 Sgly_0897 Sgly_0897 882007 882675 + hypothetical protein KEGG: dhd:Dhaf_4875 hypothetical protein~SPTR: Putative uncharacterized protein gene gene922 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0897 Sgly_0898 Sgly_0898 Sgly_0898 883130 883837 + GCN5-related N-acetyltransferase COGs: COG3153 acetyltransferase~InterPro IPR000182~KEGG: mba:Mbar_A3726 acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: Putative uncharacterized protein%3B~PFAM: Acetyltransferase (GNAT) family gene gene923 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0898 Sgly_0899 Sgly_0899 Sgly_0899 883846 884590 + pseudogene gene924 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0899 Sgly_0900 Sgly_0900 Sgly_0900 885086 886087 + putative transcriptional regulator COGs: COG2378 transcriptional regulator protein~KEGG: clj:CLJU_c35580 putative transcriptional regulator~SPTR: Predicted transcriptional regulator%3B~PFAM: HTH domain gene gene925 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0900 Sgly_0901 Sgly_0901 Sgly_0901 886484 889000 + metal dependent phosphohydrolase COGs: COG1203 helicase~InterPro IPR001650: IPR006674: IPR006483: IPR006474~KEGG: rrs:RoseRS_4335 CRISPR-associated helicase Cas3~PFAM: Metal-dependent phosphohydrolase%2C HD subdomain%3B DNA/RNA helicase%2C C-terminal~SMART: DNA/RNA helicase%2C C-terminal~SPTR: CRISPR-associated helicase%2C Cas3 family%3B~TIGRFAM: CRISPR-associated HD domain%3B Helicase Cas3%2C CRISPR-associated%2C core~PFAM: HD domain%3B DEAD/DEAH box helicase~TIGRFAM: CRISPR-associated helicase Cas3%3B CRISPR-associated endonuclease Cas3-HD gene gene926 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0901 Sgly_0902 Sgly_0902 Sgly_0902 889013 889732 + CRISPR-associated protein%2C Csd5d family InterPro IPR021124: IPR013422: IPR010155~KEGG: geo:Geob_3415 CRISPR-associated protein Cas5 family~PFAM: CRISPR-associated protein%2C Cas5~SPTR: CRISPR-associated protein%2C CT1134%3B~TIGRFAM: CRISPR-associated protein%2C Cas5d-type%3B CRISPR-associated protein Cas5%2C N-terminal domain~PFAM: CRISPR-associated protein (Cas_Cas5)~TIGRFAM: CRISPR-associated protein Cas5%2C Dvulg subtype%3B CRISPR-associated protein Cas5%2C N-terminal domain gene gene927 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0902 Sgly_0903 Sgly_0903 Sgly_0903 889729 891693 + CRISPR-associated protein%2C Csd1 family InterPro IPR010144~KEGG: rrs:RoseRS_4333 CRISPR-associated RAMP Csd1 family protein~PFAM: CRISPR-associated protein%2C Csd1-type~SPTR: CRISPR-associated protein%2C Csd1 family%3B~TIGRFAM: CRISPR-associated protein%2C Csd1-type~PFAM: CRISPR-associated protein (Cas_Csd1)~TIGRFAM: CRISPR-associated protein%2C Csd1 family gene gene928 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0903 Sgly_0904 Sgly_0904 Sgly_0904 891761 892627 + CRISPR-associated protein%2C Csd2 family COGs: COG3649 Uncharacterized protein predicted to be involved in DNA repair~InterPro IPR006482: IPR013418~KEGG: rrs:RoseRS_4332 CRISPR-associated Csd2 family protein~PFAM: CRISPR-associated protein TM1801~SPTR: CRISPR-associated protein%2C Csd2 family%3B~TIGRFAM: CRISPR-associated protein Csd2%3B CRISPR-associated protein TM1801~PFAM: Family of unknown function (DUF694)~TIGRFAM: CRISPR-associated protein%2C CT1132 family%3B CRISPR-associated protein%2C Csd2 family gene gene929 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0904 Sgly_0905 Sgly_0905 Sgly_0905 892634 893326 + CRISPR-associated exonuclease%2C Cas4 family COGs: COG1468 RecB family exonuclease~InterPro IPR013343~KEGG: drm:Dred_1006 CRISPR-associated Cas4 family protein~SPTR: CRISPR-associated protein Cas4%3B~TIGRFAM: CRISPR-associated protein Cas4~PFAM: Domain of unknown function DUF83~TIGRFAM: CRISPR-associated protein Cas4 gene gene930 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0905 Sgly_0906 Sgly_0906 Sgly_0906 893323 894354 + CRISPR-associated protein%2C Cas1 family COGs: COG1518 Uncharacterized protein predicted to be involved in DNA repair~InterPro IPR002729: IPR019856~KEGG: swo:Swol_0480 hypothetical protein~PFAM: CRISPR-associated protein Cas1~SPTR: CRISPR-associated protein%2C Cas1 family%3B~TIGRFAM: CRISPR-associated protein Cas1%2C DVULG subtype%3B CRISPR-associated protein Cas1~PFAM: CRISPR associated protein Cas1~TIGRFAM: CRISPR-associated endonuclease Cas1%2C DVULG subtype%3B CRISPR-associated endonuclease Cas1 gene gene931 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0906 Sgly_0907 Sgly_0907 Sgly_0907 894365 894670 + CRISPR-associated protein%2C Cas2 family COGs: COG1343 Uncharacterized protein predicted to be involved in DNA repair~InterPro IPR021127~KEGG: tjr:TherJR_1884 CRISPR-associated protein Cas2~SPTR: CRISPR-associated protein Cas2%3B~TIGRFAM: CRISPR associated protein Cas2~PFAM: CRISPR associated protein Cas2~TIGRFAM: CRISPR-associated endoribonuclease Cas2 gene gene932 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0907 Sgly_0908 Sgly_0908 Sgly_0908 897998 898522 + hypothetical protein KEGG: ote:Oter_2564 ribonuclease BN~SPTR: Ribonuclease BN gene gene933 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0908 Sgly_0909 Sgly_0909 Sgly_0909 898580 899857 + O-acetylhomoserine sulfhydrolase COGs: COG2873 O-acetylhomoserine sulfhydrylase~InterPro IPR000277: IPR006235~KEGG: bvu:BVU_0770 O-acetylhomoserine (thiol)-lyase~PFAM: Cys/Met metabolism%2C pyridoxal phosphate-dependent enzyme~PRIAM: Cysteine synthase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase~PFAM: Cys/Met metabolism PLP-dependent enzyme~TIGRFAM: OAH/OAS sulfhydrylase gene gene934 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0909 Sgly_0910 Sgly_0910 Sgly_0910 900103 900552 + regulatory protein MarR InterPro IPR000835~KEGG: dae:Dtox_2550 transcriptional regulator%2C MarR family~PFAM: HTH transcriptional regulator%2C MarR~SMART: HTH transcriptional regulator%2C MarR~SPTR: Transcriptional regulator%2C MarR family%3B~PFAM: MarR family gene gene935 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0910 Sgly_0911 Sgly_0911 Sgly_0911 900859 901071 + pseudogene gene936 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0911 Sgly_0912 Sgly_0912 Sgly_0912 901631 902401 + protein of unknown function DUF81 InterPro IPR002781~KEGG: dsy:DSY3674 hypothetical protein~PFAM: Protein of unknown function DUF81~SPTR: Putative uncharacterized protein%3B~PFAM: Sulfite exporter TauE/SafE gene gene937 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0912 Sgly_0913 Sgly_0913 Sgly_0913 902673 903071 + transcriptional repressor%2C CopY family COGs: COG3682 transcriptional regulator protein~InterPro IPR005650~KEGG: cpo:COPRO5265_1461 penicillinase repressor (regulatory protein BlaI) (beta-lactamaserepressor protein)~PFAM: Penicillinase repressor~SPTR: Penicillinase repressor (Regulatory protein BlaI) (Beta-lactamaserepressor protein)%3B~PFAM: Penicillinase repressor gene gene938 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0913 Sgly_0914 Sgly_0914 Sgly_0914 903064 904746 + peptidase M56 BlaR1 COGs: COG4219 Antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component~InterPro IPR008756~KEGG: cpo:COPRO5265_1460 peptidase%2C M56 family protein~PFAM: Peptidase M56%2C BlaR1~SPTR: Peptidase%2C M56 family protein%3B~PFAM: BlaR1 peptidase M56 gene gene939 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0914 Sgly_0915 Sgly_0915 Sgly_0915 905024 906298 + gamma-D-glutamyl-{L}-meso-diaminopimelate peptidase I COGs: COG2866 carboxypeptidase~InterPro IPR002482: IPR000834: IPR002477: IPR018392~KEGG: cbl:CLK_0816 zinc carboxypeptidase family protein~PFAM: Peptidase M14%2C carboxypeptidase A%3B Peptidoglycan binding-like%3B Peptidoglycan-binding lysin domain~SMART: Peptidase M14%2C carboxypeptidase A%3B Peptidoglycan-binding Lysin subgroup~SPTR: Zinc carboxypeptidase family protein%3B~PFAM: Putative peptidoglycan binding domain%3B Zinc carboxypeptidase%3B LysM domain gene gene940 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0915 Sgly_0916 Sgly_0916 Sgly_0916 906591 907610 - D-alanine--D-alanine ligase COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein~HAMAP: D-alanine--D-alanine ligase~InterPro IPR011127: IPR011095: IPR005905~KEGG: cpy:Cphy_0084 D-alanine--D-alanine ligase~PFAM: D-alanine--D-alanine ligase%2C C-terminal%3B D-alanine--D-alanine ligase%2C N-terminal~PRIAM: D-alanine--D-alanine ligase~SPTR: D-alanine--D-alanine ligase%3B~TIGRFAM: D-alanine--D-alanine ligase~PFAM: D-ala D-ala ligase C-terminus%3B D-ala D-ala ligase N-terminus~TIGRFAM: D-alanine--D-alanine ligase gene gene941 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0916 Sgly_0917 Sgly_0917 Sgly_0917 907948 908511 - regulatory protein TetR InterPro IPR001647~KEGG: cac:CA_C0723 AcrR family transcriptional regulator~PFAM: Transcription regulator%2C TetR-like%2C DNA-binding%2C bacterial/archaeal~SPTR: Transcriptional regulator%2C AcrR family%3B~PFAM: Bacterial regulatory proteins%2C tetR family gene gene942 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0917 Sgly_0918 Sgly_0918 Sgly_0918 908713 909405 + NADPH-dependent FMN reductase COGs: COG0655 Multimeric flavodoxin WrbA~InterPro IPR005025~KEGG: cdl:CDR20291_0414 putative iron-sulfur flavoprotein~PFAM: NADPH-dependent FMN reductase~SPTR: Putative iron-sulfur flavoprotein%3B~PFAM: NADPH-dependent FMN reductase gene gene943 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0918 Sgly_0919 Sgly_0919 Sgly_0919 909916 910695 + RNA-directed DNA polymerase (Reverse transcriptase) COGs: COG3344 Retron-type reverse transcriptase~InterPro IPR000477~KEGG: nth:Nther_2778 RNA-directed DNA polymerase (reverse transcriptase)~PFAM: RNA-directed DNA polymerase (reverse transcriptase)~SPTR: RNA-directed DNA polymerase (Reverse transcriptase)%3B~PFAM: Reverse transcriptase (RNA-dependent DNA polymerase) gene gene944 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0919 Sgly_0920 Sgly_0920 Sgly_0920 910972 911472 + metal-dependent phosphohydrolase HD sub domain protein InterPro IPR006674~KEGG: ccb:Clocel_0535 metal-dependent phosphohydrolase HD sub domain~PFAM: Metal-dependent phosphohydrolase%2C HD subdomain~SPTR: Metal-dependent phosphohydrolase HD sub domain%3B~PFAM: HD domain gene gene945 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0920 Sgly_0921 Sgly_0921 Sgly_0921 911725 912258 + Ferroxidase COGs: COG1528 Ferritin-like protein~InterPro IPR008331~KEGG: cce:Ccel_0043 ferritin Dps family protein~PFAM: Ferritin/Dps protein~PRIAM: Ferroxidase~SPTR: Ferritin Dps family protein%3B~PFAM: Ferritin-like domain gene gene946 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0921 Sgly_0922 Sgly_0922 Sgly_0922 912642 913196 + nitroreductase COGs: COG0778 Nitroreductase~InterPro IPR000415~KEGG: ckr:CKR_0293 hypothetical protein~PFAM: Nitroreductase-like~SPTR: Putative uncharacterized protein%3B~PFAM: Nitroreductase family gene gene947 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0922 Sgly_0923 Sgly_0923 Sgly_0923 913247 913858 + 3-methyladenine DNA glycosylase COGs: COG2094 3-methyladenine DNA glycosylase~HAMAP: Methylpurine-DNA glycosylase (MPG)~InterPro IPR003180~KEGG: dhd:Dhaf_1650 3-methyladenine DNA glycosylase~PFAM: Methylpurine-DNA glycosylase (MPG)~PRIAM: DNA-3-methyladenine glycosylase II~SPTR: Putative 3-methyladenine DNA glycosylase%3B~TIGRFAM: Methylpurine-DNA glycosylase (MPG)~PFAM: Methylpurine-DNA glycosylase (MPG)~TIGRFAM: DNA-3-methyladenine glycosylase (3mg) gene gene948 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0923 Sgly_0924 Sgly_0924 Sgly_0924 913911 915293 - glutamylcysteine synthetase COGs: COG3572 Gamma-glutamylcysteine synthetase~KEGG: mst:Msp_0837 glutamylcysteine synthetase~SPTR: Predicted glutamylcysteine synthetase%3B~PFAM: Glutamate-cysteine ligase family 2(GCS2) gene gene949 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0924 Sgly_0925 Sgly_0925 Sgly_0925 915346 916530 - amidohydrolase COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase~InterPro IPR002933: IPR011650: IPR010168~KEGG: ccb:Clocel_3472 amidohydrolase~PFAM: Peptidase M20%3B Peptidase M20%2C dimerisation~PRIAM: N-acetyldiaminopimelate deacetylase~SPTR: Amidohydrolase%3B~TIGRFAM: Peptidase M20D%2C amidohydrolase~PFAM: Peptidase family M20/M25/M40%3B Peptidase dimerisation domain~TIGRFAM: amidohydrolase gene gene950 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0925 Sgly_0926 Sgly_0926 Sgly_0926 917222 918019 + NUDIX hydrolase InterPro IPR000086~KEGG: rpd:RPD_2109 hypothetical protein~PFAM: NUDIX hydrolase domain~SPTR: NUDIX hydrolase gene gene951 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0926 Sgly_0927 Sgly_0927 Sgly_0927 918074 918523 + pseudogene gene952 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0927 Sgly_0928 Sgly_0928 Sgly_0928 918606 919799 - cystathionine gamma-synthase COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase~InterPro IPR000277~KEGG: blo:BL1559 cystathionine gamma lyase~PFAM: Cys/Met metabolism%2C pyridoxal phosphate-dependent enzyme~PRIAM: Cystathionine gamma-synthase~SPTR: Cystathionine gamma-synthase%3B~PFAM: Cys/Met metabolism PLP-dependent enzyme gene gene953 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0928 Sgly_0929 Sgly_0929 Sgly_0929 920115 920411 + methylated-DNA/protein-cysteinemethyltransferase COGs: COG3695 methylated DNA-protein cysteine methyltransferase~InterPro IPR014048~KEGG: dhd:Dhaf_4686 methylated-DNA/protein-cysteine methyltransferase~PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase%2C DNA binding~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase%2C DNA binding~PFAM: 6-O-methylguanine DNA methyltransferase%2C DNA binding domain~TIGRFAM: O-6-methylguanine DNA methyltransferase gene gene954 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0929 Sgly_0930 Sgly_0930 Sgly_0930 920497 921285 + hypothetical protein KEGG: dae:Dtox_0634 hypothetical protein~SPTR: Putative uncharacterized protein gene gene955 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0930 Sgly_0931 Sgly_0931 Sgly_0931 921728 922609 + hypothetical protein KEGG: ele:Elen_0434 hypothetical protein~SPTR: Putative uncharacterized protein gene gene956 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0931 Sgly_0932 Sgly_0932 Sgly_0932 922879 923697 + helix-turn-helix domain protein InterPro IPR001387: IPR013216~KEGG: dhd:Dhaf_0966 transcriptional regulator%2C XRE family~PFAM: Helix-turn-helix type 3%3B Methyltransferase type 11~SMART: Helix-turn-helix type 3~SPTR: Transcriptional regulator%2C XRE family%3B~PFAM: Helix-turn-helix%3B Tellurite resistance protein TehB gene gene957 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0932 Sgly_0933 Sgly_0933 Sgly_0933 924014 924529 + hypothetical protein KEGG: dhd:Dhaf_1258 hypothetical protein~SPTR: Putative uncharacterized protein gene gene958 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0933 Sgly_0934 Sgly_0934 Sgly_0934 924800 925399 + transglutaminase domain-containing protein COGs: COG1305 Transglutaminase-like protein~InterPro IPR002931~KEGG: mla:Mlab_1055 hypothetical protein~PFAM: Transglutaminase-like~SPTR: Transglutaminase domain protein%3B~PFAM: Transglutaminase-like superfamily gene gene959 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0934 Sgly_0935 Sgly_0935 Sgly_0935 925668 927425 + Xenobiotic-transporting ATPase COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterPro IPR003593: IPR001140: IPR003439~KEGG: afl:Aflv_1326 ABC-type multidrug transport system%2C ATPase and permease component~PFAM: ABC transporter-like%3B ABC transporter%2C transmembrane domain~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related protein%3B~PFAM: ABC transporter%3B ABC transporter transmembrane region gene gene960 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0935 Sgly_0936 Sgly_0936 Sgly_0936 927422 929152 + Xenobiotic-transporting ATPase COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterPro IPR003593: IPR001140: IPR003439~KEGG: bha:BH2335 ABC transporter ATP-binding protein~PFAM: ABC transporter-like%3B ABC transporter%2C transmembrane domain~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related protein%3B~PFAM: ABC transporter transmembrane region%3B ABC transporter gene gene961 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0936 Sgly_0937 Sgly_0937 Sgly_0937 929448 930236 + protein of unknown function DUF990 COGs: COG4587 ABC-type uncharacterized transport system permease component~InterPro IPR010390~KEGG: pjd:Pjdr2_0631 protein of unknown function DUF990~PFAM: Protein of unknown function DUF990~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF990) gene gene962 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0937 Sgly_0938 Sgly_0938 Sgly_0938 930240 931037 + protein of unknown function DUF990 COGs: COG3694 ABC-type uncharacterized transport system permease component~InterPro IPR010390~KEGG: sth:STH3203 hypothetical protein~PFAM: Protein of unknown function DUF990~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF990) gene gene963 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0938 Sgly_0939 Sgly_0939 Sgly_0939 931098 932081 + Phosphonate-transporting ATPase COGs: COG4586 ABC-type uncharacterized transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: sth:STH2664 ABC transporter ATP-binding protein~PFAM: ABC transporter-like~PRIAM: Phosphonate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter ATP-binding protein%3B~PFAM: ABC transporter gene gene964 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0939 Sgly_0940 Sgly_0940 Sgly_0940 932221 932694 + pseudogene gene965 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0940 Sgly_0941 Sgly_0941 Sgly_0941 932752 933192 + GCN5-related N-acetyltransferase InterPro IPR000182~KEGG: dbr:Deba_1308 GCN5-related N-acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: Putative uncharacterized protein%3B~PFAM: Acetyltransferase (GNAT) family gene gene966 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0941 Sgly_0942 Sgly_0942 Sgly_0942 933273 934496 + protein of unknown function DUF1006 COGs: COG3214 conserved hypothetical protein~InterPro IPR009351~KEGG: bbe:BBR47_29660 hypothetical protein~PFAM: Protein of unknown function DUF1006~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1006) gene gene967 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0942 Sgly_0943 Sgly_0943 Sgly_0943 934543 935001 + GCN5-related N-acetyltransferase InterPro IPR000182~KEGG: spe:Spro_3703 GCN5-related N-acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: GCN5-related N-acetyltransferase%3B~PFAM: Acetyltransferase (GNAT) family gene gene968 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0943 Sgly_0944 Sgly_0944 Sgly_0944 935041 935496 + NUDIX hydrolase InterPro IPR000086~KEGG: aoe:Clos_1150 NUDIX hydrolase~PFAM: NUDIX hydrolase domain~SPTR: NUDIX hydrolase%3B~PFAM: NUDIX domain gene gene969 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0944 Sgly_0945 Sgly_0945 Sgly_0945 935658 935789 + UDP-N-acetylglucosamine pyrophosphorylase KEGG: srt:Srot_2687 UDP-N-acetylglucosamine pyrophosphorylase~SPTR: Putative uncharacterized protein gene gene970 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0945 Sgly_0946 Sgly_0946 Sgly_0946 935791 936180 + Glyoxalase/bleomycin resistance protein/dioxygenase InterPro IPR004360~KEGG: ssm:Spirs_4161 glyoxalase/bleomycin resistance protein/dioxygenase~PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase~SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase%3B~PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily gene gene971 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0946 Sgly_0947 Sgly_0947 Sgly_0947 936621 937577 + GCN5-related N-acetyltransferase InterPro IPR000182~KEGG: cbe:Cbei_2368 GCN5-related N-acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: GCN5-related N-acetyltransferase%3B~PFAM: Acetyltransferase (GNAT) family gene gene972 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0947 Sgly_0948 Sgly_0948 Sgly_0948 937753 938286 + protein of unknown function UPF0157 COGs: COG2320 conserved hypothetical protein~InterPro IPR007344~KEGG: cdl:CDR20291_0528 hypothetical protein~PFAM: Uncharacterised protein family UPF0157~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterised protein family (UPF0157) gene gene973 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0948 Sgly_0949 Sgly_0949 Sgly_0949 938400 938882 + flavodoxin KEGG: ttm:Tthe_0874 flavodoxin~SPTR: Flavodoxin%3B~PFAM: NADPH-dependent FMN reductase gene gene974 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0949 Sgly_0950 Sgly_0950 Sgly_0950 938901 939329 + GCN5-related N-acetyltransferase COGs: COG2153 acyltransferase~InterPro IPR000182~KEGG: rsk:RSKD131_2523 GCN5-related N-acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: Acetyltransferase%2C GNAT family%3B~PFAM: Acetyltransferase (GNAT) family gene gene975 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0950 Sgly_0951 Sgly_0951 Sgly_0951 939481 940062 + NUDIX hydrolase COGs: COG1051 ADP-ribose pyrophosphatase~InterPro IPR000086~KEGG: pth:PTH_2671 ADP-ribose pyrophosphatase~PFAM: NUDIX hydrolase domain~SPTR: ADP-ribose pyrophosphatase%3B~PFAM: NUDIX domain gene gene976 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0951 Sgly_0952 Sgly_0952 Sgly_0952 940202 940510 + hypothetical protein KEGG: eca:ECA1768 putative acetyltransferase~SPTR: GCN5-related N-acetyltransferase gene gene977 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0952 Sgly_0953 Sgly_0953 Sgly_0953 940521 941051 + metal dependent phosphohydrolase COGs: COG1896 hydrolase of HD superfamily~KEGG: ttm:Tthe_2227 metal dependent phosphohydrolase~SPTR: Metal dependent phosphohydrolase gene gene978 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0953 Sgly_0954 Sgly_0954 Sgly_0954 941056 941187 + pseudogene gene979 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0954 Sgly_0955 Sgly_0955 Sgly_0955 941284 942207 + peptidase U61 LD-carboxypeptidase A COGs: COG1619 conserved hypothetical protein~InterPro IPR003507~KEGG: gwc:GWCH70_1976 peptidase U61 LD-carboxypeptidase A~PFAM: Peptidase S66%2C LD-carboxypeptidase A~SPTR: Peptidase U61 LD-carboxypeptidase A%3B~PFAM: LD-carboxypeptidase gene gene980 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0955 Sgly_0956 Sgly_0956 Sgly_0956 942306 942962 + HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 COGs: COG0637 phosphatase/phosphohexomutase~InterPro IPR006402: IPR006439: IPR005834~KEGG: gym:GYMC10_3737 HAD-superfamily hydrolase%2C subfamily IA%2C variant 3~PFAM: Haloacid dehalogenase-like hydrolase~SPTR: HAD-superfamily hydrolase%2C subfamily IA%2C variant 3%3B~TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 3%3B HAD-superfamily hydrolase%2C subfamily IA%2C variant 1~PFAM: haloacid dehalogenase-like hydrolase~TIGRFAM: haloacid dehalogenase superfamily%2C subfamily IA%2C variant 3 with third motif having DD or ED%3B beta-phosphoglucomutase family hydrolase%3B haloacid dehalogenase superfamily%2C subfamily IA%2C variant 1 with third motif having Dx(3-4)D or Dx(3-4)E gene gene981 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0956 Sgly_0957 Sgly_0957 Sgly_0957 942977 944098 - Cystathionine beta-lyase COGs: COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities~InterPro IPR004839~KEGG: glo:Glov_2977 aminotransferase class I and II~PFAM: Aminotransferase%2C class I/II~PRIAM: Cystathionine beta-lyase~SPTR: Aminotransferase class I and II%3B~PFAM: Aminotransferase class I and II gene gene982 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0957 Sgly_0958 Sgly_0958 Sgly_0958 944379 945377 + pyridoxal phosphate-dependent enzyme%2C D-cysteine desulfhydrase family COGs: COG2515 1-aminocyclopropane-1-carboxylate deaminase~InterPro IPR005966: IPR001926~KEGG: ckr:CKR_0446 D-cysteine desulfhydrase~PFAM: Pyridoxal phosphate-dependent enzyme%2C beta subunit~PRIAM: 1-aminocyclopropane-1-carboxylate deaminase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Pyridoxal phosphate-dependent deaminase~PFAM: Pyridoxal-phosphate dependent enzyme~TIGRFAM: pyridoxal phosphate-dependent enzymes%2C D-cysteine desulfhydrase family gene gene983 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0958 Sgly_0959 Sgly_0959 Sgly_0959 945546 946124 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog~InterPro IPR014284: IPR007627: IPR013249~KEGG: bcz:BCZK0557 RNA polymerase sigma factor~PFAM: RNA polymerase sigma factor 70%2C region 4 type 2%3B RNA polymerase sigma-70 region 2~SPTR: Sigma-70%2C region 4 subfamily%3B~TIGRFAM: RNA polymerase sigma-70~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family gene gene984 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0959 Sgly_0960 Sgly_0960 Sgly_0960 946117 947067 + hypothetical protein KEGG: dhd:Dhaf_3571 hypothetical protein~SPTR: Putative uncharacterized protein gene gene985 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0960 Sgly_0961 Sgly_0961 Sgly_0961 947064 947810 + hypothetical protein KEGG: hsl:OE4697R hypothetical protein~SPTR: Putative uncharacterized protein gene gene986 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0961 Sgly_0962 Sgly_0962 Sgly_0962 948890 951331 + ATP-dependent DNA ligase LigD polymerase module%3BATP-dependent DNA ligase LigD phosphoesterase module COGs: COG3285 eukaryotic-type DNA primase~InterPro IPR014144: IPR014146: IPR014143: IPR014145: IPR 012310: IPR012309: IPR002755~KEGG: dhd:Dhaf_0568 DNA ligase D~PFAM: ATP dependent DNA ligase%2C central%3B ATP dependent DNA ligase%2C C-terminal%3B DNA primase%2C small subunit~SPTR: DNA ligase D%3B~TIGRFAM: DNA ligase D%3B DNA polymerase LigD%2C ligase domain%3B DNA ligase D%2C 3'-phosphoesterase domain%3B DNA polymerase LigD%2C polymerase domain~PFAM: ATP dependent DNA ligase domain%3B Eukaryotic and archaeal DNA primase small subunit%3B ATP dependent DNA ligase C terminal region~TIGRFAM: DNA polymerase LigD%2C ligase domain%3B DNA ligase D%3B DNA polymerase LigD%2C polymerase domain%3B DNA ligase D%2C 3'-phosphoesterase domain gene gene987 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0962 Sgly_0963 Sgly_0963 Sgly_0963 951550 952584 + Uroporphyrinogen decarboxylase (URO-D) COGs: COG0407 Uroporphyrinogen-III decarboxylase~InterPro IPR000257~KEGG: fpl:Ferp_1758 uroporphyrinogen decarboxylase (URO-D)~PFAM: Uroporphyrinogen decarboxylase (URO-D)~SPTR: Uroporphyrinogen decarboxylase (URO-D)%3B~PFAM: Uroporphyrinogen decarboxylase (URO-D)~TIGRFAM: methyltransferase%2C MtaA/CmuA family gene gene988 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0963 Sgly_0964 Sgly_0964 Sgly_0964 952788 953225 + transcriptional regulator%2C MarR family COGs: COG1846 Transcriptional regulators~InterPro IPR000835~KEGG: cbe:Cbei_0706 MarR family transcriptional regulator~PFAM: HTH transcriptional regulator%2C MarR~SMART: HTH transcriptional regulator%2C MarR~SPTR: Transcriptional regulator%2C MarR family%3B~PFAM: MarR family gene gene989 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0964 Sgly_0965 Sgly_0965 Sgly_0965 953254 954645 + major facilitator superfamily MFS_1 COGs: COG2814 Arabinose efflux permease~InterPro IPR011701~KEGG: ckr:CKR_1385 hypothetical protein~PFAM: Major facilitator superfamily MFS-1~SPTR: Putative uncharacterized protein%3B~PFAM: Major Facilitator Superfamily~TIGRFAM: drug resistance transporter%2C EmrB/QacA subfamily gene gene990 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0965 Sgly_0966 Sgly_0966 Sgly_0966 954875 955201 + nitrogen regulatory protein P-II COGs: COG0347 Nitrogen regulatory protein PII~InterPro IPR002187~KEGG: ckr:CKR_1626 hypothetical protein~PFAM: Nitrogen regulatory protein PII~SPTR: Putative uncharacterized protein%3B~PFAM: Nitrogen regulatory protein P-II gene gene991 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0966 Sgly_0967 Sgly_0967 Sgly_0967 955219 955575 + nitrogen regulatory protein P-II COGs: COG0347 Nitrogen regulatory protein PII~InterPro IPR002187~KEGG: cpb:Cphamn1_1753 nitrogen regulatory protein P-II~PFAM: Nitrogen regulatory protein PII~SPTR: Nitrogen regulatory protein PII%3B~PFAM: Nitrogen regulatory protein P-II gene gene992 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0967 Sgly_0968 Sgly_0968 Sgly_0968 955589 956377 + binding-protein-dependent transport systems inner membrane component COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component~InterPro IPR000515~KEGG: tjr:TherJR_0601 binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: ABC-type nitrate/sulfonate/bicarbonate transport system%2C permease component%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene993 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0968 Sgly_0969 Sgly_0969 Sgly_0969 956430 957275 + Taurine-transporting ATPase COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: tjr:TherJR_0602 ABC transporter related protein~PFAM: ABC transporter-like~PRIAM: Taurine-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Taurine ABC transporter%2C ATP-binding protein%3B~PFAM: ABC transporter gene gene994 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0969 Sgly_0970 Sgly_0970 Sgly_0970 957256 958362 + aliphatic sulfonates family ABC transporter%2C periplasmic ligand-binding protein COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components~InterPro IPR010067: IPR001638~KEGG: tjr:TherJR_0600 aliphatic sulfonates family ABC transporter%2C periplasmic ligand-binding protein~SMART: Extracellular solute-binding protein%2C family 3~SPTR: Aliphatic sulfonates family ABC transporter%2C periplasmic ligand-binding protein%3B~TIGRFAM: ABC transporter%2C substrate-binding protein%2C aliphatic sulphonates~PFAM: NMT1/THI5 like~TIGRFAM: ABC transporter%2C substrate-binding protein%2C aliphatic sulfonates family gene gene995 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0970 Sgly_0971 Sgly_0971 Sgly_0971 958396 959409 + agmatinase COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family~InterPro IPR005925: IPR006035~KEGG: cwo:Cwoe_0990 arginase/agmatinase/formiminoglutamase~PFAM: Ureohydrolase~PRIAM: Agmatinase~SPTR: Putative agmatine ureohydrolase%3B~TIGRFAM: Putative agmatinase~PFAM: Arginase family~TIGRFAM: agmatinase gene gene996 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0971 Sgly_0972 Sgly_0972 Sgly_0972 959453 959758 + nitrogen regulatory protein P-II InterPro IPR002187~KEGG: tsi:TSIB_1114 nitrogen regulatory protein P-II~PFAM: Nitrogen regulatory protein PII~SPTR: Nitrogen regulatory protein P-II%3B~PFAM: Nitrogen regulatory protein P-II gene gene997 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0972 Sgly_0973 Sgly_0973 Sgly_0973 959808 960986 + transcriptional regulator%2C CdaR COGs: COG3835 Sugar diacid utilization regulator~KEGG: cac:CA_C1426 transcriptional regulator~SPTR: Possible transcriptional regulator from leucine-rich protein (LRPR) family%3B~PFAM: Purine catabolism regulatory protein-like family gene gene998 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0973 Sgly_0974 Sgly_0974 Sgly_0974 961011 961313 + Urease subunit gamma COGs: COG0831 Urea amidohydrolase (urease) gamma subunit~HAMAP: Urease%2C gamma subunit~InterPro IPR002026: IPR012010~KEGG: cth:Cthe_1818 urease%2C gamma subunit~PFAM: Urease%2C alpha/gamma subunit~PRIAM: Urease~SPTR: Urease subunit gamma%3B~TIGRFAM: Urease%2C alpha/gamma subunit~PFAM: Urease%2C gamma subunit~TIGRFAM: urease%2C gamma subunit gene gene999 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0974 Sgly_0975 Sgly_0975 Sgly_0975 961327 961704 + Urease subunit beta COGs: COG0832 Urea amidohydrolase (urease) beta subunit~HAMAP: Urease%2C beta subunit~InterPro IPR002019~KEGG: tjr:TherJR_0606 urease%2C beta subunit~PFAM: Urease%2C beta subunit~PRIAM: Urease~SPTR: Urease subunit beta%3B~TIGRFAM: Urease%2C beta subunit~PFAM: Urease beta subunit~TIGRFAM: urease%2C beta subunit gene gene1000 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0975 Sgly_0976 Sgly_0976 Sgly_0976 961701 963416 + Urease subunit alpha COGs: COG0804 Urea amidohydrolase (urease) alpha subunit~HAMAP: Urease%2C alpha subunit~InterPro IPR005848: IPR011612: IPR006680~KEGG: cth:Cthe_1816 urease subunit alpha~PFAM: Amidohydrolase 1%3B Urease alpha-subunit%2C N-terminal~PRIAM: Urease~SPTR: Urease subunit alpha%3B~TIGRFAM: Urease%2C alpha subunit~PFAM: Urease alpha-subunit%2C N-terminal domain%3B Amidohydrolase family~TIGRFAM: urease%2C alpha subunit gene gene1001 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0976 Sgly_0977 Sgly_0977 Sgly_0977 963434 963883 + Urease accessory protein ureE COGs: COG2371 Urease accessory protein UreE~HAMAP: Urease accessory protein UreE~InterPro IPR004029: IPR007864: IPR012406~KEGG: fjo:Fjoh_4834 urease accessory protein UreE~PFAM: UreE urease accessory%2C C-terminal%3B UreE urease accessory%2C N-terminal~SPTR: Urease accessory protein ureE%3B~PFAM: UreE urease accessory protein%2C N-terminal domain%3B UreE urease accessory protein%2C C-terminal domain gene gene1002 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0977 Sgly_0978 Sgly_0978 Sgly_0978 963862 964566 + Urease accessory protein ureF COGs: COG0830 Urease accessory protein UreF~HAMAP: Urease accessory protein UreF~InterPro IPR002639~KEGG: cth:Cthe_1814 urease accessory protein UreF~PFAM: Urease accessory protein UreF~SPTR: Urease accessory protein ureF%3B~PFAM: UreF gene gene1003 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0978 Sgly_0979 Sgly_0979 Sgly_0979 964627 965235 + Urease accessory protein ureG COGs: COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase~HAMAP: Urease accessory protein UreG~InterPro IPR004400: IPR003495~KEGG: cth:Cthe_1813 urease accessory protein UreG~PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like~SPTR: Urease accessory protein ureG%3B~TIGRFAM: Urease accessory protein UreG~PFAM: CobW/HypB/UreG%2C nucleotide-binding domain~TIGRFAM: urease accessory protein UreG%3B hydrogenase accessory protein HypB gene gene1004 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0979 Sgly_0980 Sgly_0980 Sgly_0980 965248 966015 + Urease accessory protein ureD COGs: COG0829 Urease accessory protein UreH~HAMAP: Urease accessory protein UreD~InterPro IPR002669~KEGG: cth:Cthe_1812 urease accessory protein UreD~PFAM: Urease accessory protein UreD~SPTR: Urease accessory protein ureD%3B~PFAM: UreD urease accessory protein gene gene1005 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0980 Sgly_0981 Sgly_0981 Sgly_0981 966198 967676 + methyl-accepting chemotaxis sensory transducer COGs: COG0840 Methyl-accepting chemotaxis protein~InterPro IPR004089~KEGG: dhd:Dhaf_2177 methyl-accepting chemotaxis sensory transducer~PFAM: Chemotaxis methyl-accepting receptor%2C signalling~SMART: Chemotaxis methyl-accepting receptor%2C signalling~SPTR: Putative uncharacterized protein%3B~PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain gene gene1006 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0981 Sgly_0982 Sgly_0982 Sgly_0982 967802 968956 - peptidase S1 and S6 chymotrypsin/Hap COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain~InterPro IPR001478: IPR001254~KEGG: ttm:Tthe_0681 peptidase S1 and S6 chymotrypsin/Hap~PFAM: Peptidase S1/S6%2C chymotrypsin/Hap~SMART: PDZ/DHR/GLGF~SPTR: Putative uncharacterized protein%3B~PFAM: Trypsin%3B PDZ domain (Also known as DHR or GLGF) gene gene1007 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0982 Sgly_0983 Sgly_0983 Sgly_0983 969013 970167 - protein of unknown function DUF214 COGs: COG0577 ABC-type antimicrobial peptide transport system permease component~InterPro IPR003838~KEGG: ccb:Clocel_3453 hypothetical protein~PFAM: Protein of unknown function DUF214%2C permase predicted~SPTR: Putative uncharacterized protein%3B~PFAM: Predicted permease gene gene1008 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0983 Sgly_0984 Sgly_0984 Sgly_0984 970175 970846 - Phosphonate-transporting ATPase COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: ccb:Clocel_3452 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Phosphonate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related%3B~PFAM: ABC transporter gene gene1009 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0984 Sgly_0985 Sgly_0985 Sgly_0985 970860 971861 - biotin/lipoyl attachment domain-containing protein COGs: COG0845 Membrane-fusion protein~KEGG: gct:GC56T3_2852 biotin/lipoyl attachment domain-containing protein~SPTR: Biotin/lipoyl attachment domain-containing protein gene gene1010 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0985 Sgly_0986 Sgly_0986 Sgly_0986 971992 973284 - integral membrane sensor signal transduction histidine kinase COGs: COG0642 Signal transduction histidine kinase~InterPro IPR003661: IPR003594~KEGG: ccb:Clocel_3449 integral membrane sensor signal transduction histidine kinase~PFAM: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain~SMART: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain~SPTR: Histidine kinase%3B~PFAM: Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain gene gene1011 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0986 Sgly_0987 Sgly_0987 Sgly_0987 973277 973963 - two component transcriptional regulator%2C winged helix family COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR001789: IPR001867~KEGG: ccb:Clocel_3448 two component transcriptional regulator%2C winged helix family~PFAM: Signal transduction response regulator%2C receiver domain%3B Signal transduction response regulator%2C C-terminal~SMART: Signal transduction response regulator%2C receiver domain~SPTR: Two component transcriptional regulator%2C winged helix family%3B~PFAM: Response regulator receiver domain%3B Transcriptional regulatory protein%2C C terminal gene gene1012 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0987 Sgly_0988 Sgly_0988 Sgly_0988 974246 974587 + Cupin 2 conserved barrel domain protein COGs: COG1917 conserved hypothetical protein contains double-stranded beta-helix domain~InterPro IPR013096~KEGG: cbi:CLJ_B3178 hypothetical protein~PFAM: Cupin 2%2C conserved barrel~SPTR: Cupin 2 conserved barrel domain protein%3B~PFAM: Cupin domain gene gene1013 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0988 Sgly_0989 Sgly_0989 Sgly_0989 974644 975000 + ArsC family protein COGs: COG1393 Arsenate reductase and related protein glutaredoxin family~InterPro IPR006504: IPR006660~KEGG: cth:Cthe_1508 hypothetical protein~PFAM: Arsenate reductase-like~SPTR: Transcriptional regulator%2C Spx/MgsR family%3B~TIGRFAM: Conserved hypothetical protein%2C ArsC related~PFAM: ArsC family~TIGRFAM: transcriptional regulator%2C Spx/MgsR family gene gene1014 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0989 Sgly_0990 Sgly_0990 Sgly_0990 975378 975731 + type IV pilus assembly PilZ InterPro IPR009875~KEGG: cth:Cthe_0108 type IV pilus assembly PilZ~PFAM: Type IV pilus assembly PilZ~SPTR: Type IV pilus assembly PilZ%3B~PFAM: PilZ domain gene gene1015 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0990 Sgly_0991 Sgly_0991 Sgly_0991 976060 976488 + hypothetical protein KEGG: pjd:Pjdr2_0256 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1016 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0991 Sgly_0992 Sgly_0992 Sgly_0992 976511 977107 + Radical SAM domain protein InterPro IPR007197~KEGG: cdf:CD0392 radical SAM-superfamily protein~PFAM: Radical SAM~SPTR: Radical SAM-superfamily protein%3B~PFAM: Radical SAM superfamily gene gene1017 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0992 Sgly_0993 Sgly_0993 Sgly_0993 977307 978767 + oxidoreductase/nitrogenase component 1 COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains~InterPro IPR000510~KEGG: ckr:CKR_0741 hypothetical protein~PFAM: Nitrogenase/oxidoreductase%2C component 1~SPTR: Putative uncharacterized protein%3B~PFAM: Nitrogenase component 1 type Oxidoreductase gene gene1018 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0993 Sgly_0994 Sgly_0994 Sgly_0994 978760 980091 + oxidoreductase/nitrogenase component 1 COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains~InterPro IPR000510~KEGG: ckr:CKR_0742 hypothetical protein~PFAM: Nitrogenase/oxidoreductase%2C component 1~SPTR: Putative uncharacterized protein%3B~PFAM: Nitrogenase component 1 type Oxidoreductase gene gene1019 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0994 Sgly_0995 Sgly_0995 Sgly_0995 980148 981635 + oxidoreductase/nitrogenase component 1 COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains~InterPro IPR000510~KEGG: fsu:Fisuc_1078 oxidoreductase/nitrogenase component 1~PFAM: Nitrogenase/oxidoreductase%2C component 1~SPTR: Oxidoreductase/nitrogenase component 1%3B~PFAM: Nitrogenase component 1 type Oxidoreductase gene gene1020 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0995 Sgly_0996 Sgly_0996 Sgly_0996 981619 982923 + oxidoreductase/nitrogenase component 1 COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains~InterPro IPR000510~KEGG: fsu:Fisuc_1077 nitrogenase~PFAM: Nitrogenase/oxidoreductase%2C component 1~SPTR: Nitrogenase%3B~PFAM: Nitrogenase component 1 type Oxidoreductase gene gene1021 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0996 Sgly_0997 Sgly_0997 Sgly_0997 982999 983433 + Methyltransferase type 11 InterPro IPR013216~KEGG: cbe:Cbei_2812 methyltransferase type 11~PFAM: Methyltransferase type 11~SPTR: Methyltransferase type 11%3B~PFAM: Methyltransferase domain gene gene1022 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0997 Sgly_0998 Sgly_0998 Sgly_0998 983499 983999 + hypothetical protein KEGG: ajs:Ajs_2730 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1023 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0998 Sgly_0999 Sgly_0999 Sgly_0999 984033 984539 + transposase family protein KEGG: ajs:Ajs_2731 transposase family protein~SPTR: Transposase family protein gene gene1024 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_0999 Sgly_1000 Sgly_1000 Sgly_1000 984540 984961 + pseudogene gene1025 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1000 Sgly_1001 Sgly_1001 Sgly_1001 984978 985418 + hypothetical protein KEGG: dae:Dtox_1473 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1026 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1001 Sgly_1002 Sgly_1002 Sgly_1002 985575 985750 + pseudogene gene1027 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1002 Sgly_1003 Sgly_1003 Sgly_1003 985898 986187 + pseudogene gene1028 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1003 Sgly_1004 Sgly_1004 Sgly_1004 986366 986528 + pseudogene gene1029 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1004 Sgly_1005 Sgly_1005 Sgly_1005 986686 991101 + hypothetical protein KEGG: ptr:472444 sterile alpha motif domain containing 9-like~SPTR: Predicted protein gene gene1030 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1005 Sgly_1006 Sgly_1006 Sgly_1006 991116 991439 + pseudogene gene1031 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1006 Sgly_1007 Sgly_1007 Sgly_1007 991446 992063 + pseudogene gene1032 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1007 Sgly_1008 Sgly_1008 Sgly_1008 992375 992572 + Protein of unknown function DUF2196 COGs: COG4895 conserved hypothetical protein~InterPro IPR019240~KEGG: bpf:BpOF4_07485 hypothetical protein~PFAM: Protein of unknown function DUF2196~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Protein of unknown function DUF2196~PFAM: Uncharacterized conserved protein (DUF2196)~TIGRFAM: conserved hypothetical protein gene gene1033 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1008 Sgly_1009 Sgly_1009 Sgly_1009 992887 993015 - pseudogene gene1034 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1009 Sgly_1010 Sgly_1010 Sgly_1010 993113 993643 - 2'-5' RNA ligase COGs: COG1514 2'-5' RNA ligase~InterPro IPR004175: IPR014051~KEGG: cbl:CLK_2215 2'-5' RNA ligase~PFAM: Phosphoesterase%2C HXTX~SPTR: Putative uncharacterized protein%3B~TIGRFAM: 2'%2C5' RNA ligase~PFAM: 2'%2C5' RNA ligase family~TIGRFAM: 2'-5' RNA ligase gene gene1035 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1010 Sgly_1011 Sgly_1011 Sgly_1011 993667 994077 - formylmethionine deformylase COGs: COG0242 N-formylmethionyl-tRNA deformylase~InterPro IPR000181~KEGG: ele:Elen_0754 formylmethionine deformylase~PFAM: Formylmethionine deformylase~SPTR: Peptide deformylase%3B~PFAM: Polypeptide deformylase~TIGRFAM: peptide deformylase gene gene1036 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1011 Sgly_1012 Sgly_1012 Sgly_1012 994296 996089 - Xenobiotic-transporting ATPase COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterPro IPR003593: IPR001140: IPR003439~KEGG: cac:CA_C2756 MDR-type ABC transporter (membrane associated ATPase)~PFAM: ABC transporter-like%3B ABC transporter%2C transmembrane domain~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: MDR-type ABC transporter (Membrane associated ATPase)%3B~PFAM: ABC transporter transmembrane region%3B ABC transporter gene gene1037 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1012 Sgly_1013 Sgly_1013 Sgly_1013 996031 997803 - Xenobiotic-transporting ATPase COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterPro IPR003593: IPR001140: IPR003439~KEGG: cac:CA_C2755 MDR-type ABC transporter (membrane associated ATPase)~PFAM: ABC transporter-like%3B ABC transporter%2C transmembrane domain~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: MDR-type ABC transporter (Membrane associated ATPase)%3B~PFAM: ABC transporter%3B ABC transporter transmembrane region gene gene1038 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1013 Sgly_1014 Sgly_1014 Sgly_1014 997800 998795 - transcriptional regulator%2C LacI family COGs: COG1609 Transcriptional regulators~InterPro IPR000843~KEGG: ttm:Tthe_1938 transcriptional regulator%2C LacI family~SMART: HTH transcriptional regulator%2C LacI~SPTR: Transcriptional regulator%2C LacI family%3B~PFAM: Bacterial regulatory proteins%2C lacI family gene gene1039 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1014 Sgly_1015 Sgly_1015 Sgly_1015 999170 1000036 + Taurine-transporting ATPase COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: mja:MJ_0412 nitrate transporter protein NrtC homolog CmpC~PFAM: ABC transporter-like~PRIAM: Taurine-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Uncharacterized ABC transporter ATP-binding protein MJ0412%3B~PFAM: ABC transporter gene gene1040 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1015 Sgly_1016 Sgly_1016 Sgly_1016 1000026 1000829 + binding-protein-dependent transport systems inner membrane component COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component~InterPro IPR000515~KEGG: tjr:TherJR_2469 binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Binding-protein-dependent transport systems inner membrane component%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1041 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1016 Sgly_1017 Sgly_1017 Sgly_1017 1000888 1001688 + CoA-substrate-specific enzyme activase COGs: COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)~InterPro IPR008275: IPR002731~KEGG: mpl:Mpal_1148 CoA-substrate-specific enzyme activase~PFAM: ATPase%2C BadF/BadG/BcrA/BcrD type~PRIAM: Benzoyl-CoA reductase~SPTR: CoA-substrate-specific enzyme activase%3B~TIGRFAM: CoA enzyme activase~PFAM: BadF/BadG/BcrA/BcrD ATPase family~TIGRFAM: CoA-substrate-specific enzyme activase%2C putative%3B benzoyl-CoA reductase%2C bzd-type%2C Q subunit%3B benzoyl-CoA reductase%2C bcr type%2C subunit D gene gene1042 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1017 Sgly_1018 Sgly_1018 Sgly_1018 1001690 1002862 + 2-hydroxyglutaryl-CoA dehydratase D-component COGs: COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit BcrC/BadD/HgdB~InterPro IPR010327~KEGG: gur:Gura_3877 2-hydroxyglutaryl-CoA dehydratase%2C D-component~PFAM: 2-hydroxyglutaryl-CoA dehydratase%2C D-component~SPTR: 2-hydroxyglutaryl-CoA dehydratase%2C D-component%3B~PFAM: 2-hydroxyglutaryl-CoA dehydratase%2C D-component gene gene1043 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1018 Sgly_1019 Sgly_1019 Sgly_1019 1002872 1004263 + 2-hydroxyglutaryl-CoA dehydratase D-component COGs: COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit BcrC/BadD/HgdB~InterPro IPR010327~KEGG: mpl:Mpal_1137 2-hydroxyglutaryl-CoA dehydratase D-component~PFAM: 2-hydroxyglutaryl-CoA dehydratase%2C D-component~SPTR: 2-hydroxyglutaryl-CoA dehydratase D-component%3B~PFAM: 2-hydroxyglutaryl-CoA dehydratase%2C D-component gene gene1044 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1019 Sgly_1020 Sgly_1020 Sgly_1020 1004285 1005295 + extracellular solute-binding protein family 3 COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components~InterPro IPR001638~KEGG: gym:GYMC10_5033 NMT1/THI5 like domain protein~SMART: Extracellular solute-binding protein%2C family 3~SPTR: NMT1/THI5 like domain protein%3B~PFAM: NMT1/THI5 like gene gene1045 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1020 Sgly_1021 Sgly_1021 Sgly_1021 1005451 1006668 + major facilitator superfamily MFS_1 InterPro IPR011701~KEGG: dae:Dtox_1613 major facilitator superfamily MFS_1~PFAM: Major facilitator superfamily MFS-1~SPTR: Major facilitator superfamily MFS_1%3B~PFAM: Bacterial protein of unknown function (DUF894) gene gene1046 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1021 Sgly_1022 Sgly_1022 Sgly_1022 1006997 1007710 - peptidase C26 COGs: COG2071 glutamine amidotransferase~InterPro IPR011697~KEGG: bln:Blon_1611 peptidase C26~PFAM: Peptidase C26~SPTR: Glutamine amidotransferase class-I domain protein%3B~PFAM: Peptidase C26 gene gene1047 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1022 Sgly_1023 Sgly_1023 Sgly_1023 1008002 1009336 + hypothetical protein COGs: COG1373 ATPase (AAA+ superfamily)~KEGG: tjr:TherJR_0169 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1048 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1023 Sgly_1024 Sgly_1024 Sgly_1024 1009410 1009922 - GCN5-related N-acetyltransferase COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein~InterPro IPR000182~KEGG: pdi:BDI_1477 acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: Putative uncharacterized protein%3B~PFAM: Acetyltransferase (GNAT) family gene gene1049 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1024 Sgly_1025 Sgly_1025 Sgly_1025 1010182 1010403 - pseudogene gene1050 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1025 Sgly_1026 Sgly_1026 Sgly_1026 1010470 1010676 + hypothetical protein KEGG: clj:CLJU_c27160 hypothetical protein~SPTR: Putative transposase%3B~manually curated gene gene1051 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1026 Sgly_1027 Sgly_1027 Sgly_1027 1010693 1011217 + pseudogene gene1052 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1027 Sgly_1028 Sgly_1028 Sgly_1028 1011201 1011554 + hypothetical protein KEGG: xca:xccb100_1540 hypothetical protein~SPTR: Putative ABC transporter related protein gene gene1053 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1028 Sgly_1029 Sgly_1029 Sgly_1029 1011538 1012194 + hypothetical protein KEGG: bpb:bpr_I0755 HD-GYP/cache domain-containing protein~SPTR: Putative uncharacterized protein gene gene1054 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1029 Sgly_1030 Sgly_1030 Sgly_1030 1012191 1012826 + hypothetical protein KEGG: mpl:Mpal_0500 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1055 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1030 Sgly_1031 Sgly_1031 Sgly_1031 1012985 1013314 + hypothetical protein KEGG: scb:SCAB_10741 putative nitrate/nitrite transporter protein~SPTR: Predicted protein gene gene1056 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1031 Sgly_1032 Sgly_1032 Sgly_1032 1013311 1018167 + S-layer domain-containing protein COGs: COG5263 FOG: Glucan-binding domain (YG repeat)~InterPro IPR003961: IPR003343: IPR001119: IPR002479~KEGG: dhd:Dhaf_2434 cell wall/surface repeat protein~PFAM: S-layer homology domain%3B Bacterial Ig-like%2C group 2%3B Fibronectin%2C type III%3B Putative cell wall binding repeat~SPTR: S-layer domain protein%3B~PFAM: Bacterial Ig-like domain (group 2)%3B Putative cell wall binding repeat%3B S-layer homology domain gene gene1057 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1032 Sgly_1033 Sgly_1033 Sgly_1033 1018349 1018675 - pseudogene gene1058 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1033 Sgly_1034 Sgly_1034 Sgly_1034 1018712 1019155 - hypothetical protein KEGG: dae:Dtox_0397 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1059 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1034 Sgly_1035 Sgly_1035 Sgly_1035 1019333 1021294 - hypothetical protein KEGG: dsy:DSY2017 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1430) gene gene1060 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1035 Sgly_1036 Sgly_1036 Sgly_1036 1021404 1022012 - Phosphonate-transporting ATPase COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: dsy:DSY2016 hypothetical protein~PFAM: ABC transporter-like~PRIAM: Phosphonate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ABC transporter~TIGRFAM: putative bacteriocin export ABC transporter%2C lactococcin 972 group gene gene1061 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1036 Sgly_1037 Sgly_1037 Sgly_1037 1022009 1023979 - hypothetical protein COGs: COG4652 conserved hypothetical protein~KEGG: dsy:DSY2017 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1430) gene gene1062 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1037 Sgly_1038 Sgly_1038 Sgly_1038 1024220 1024813 - hypothetical protein KEGG: sth:STH2001 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1063 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1038 Sgly_1039 Sgly_1039 Sgly_1039 1025933 1026985 - hypothetical protein KEGG: hpb:HELPY_0757 NAD-dependent DNA ligase LigA~SPTR: Putative uncharacterized protein gene gene1064 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1039 Sgly_1040 Sgly_1040 Sgly_1040 1027564 1028172 - Phosphonate-transporting ATPase COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: dsy:DSY2016 hypothetical protein~PFAM: ABC transporter-like~PRIAM: Phosphonate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ABC transporter~TIGRFAM: putative bacteriocin export ABC transporter%2C lactococcin 972 group gene gene1065 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1040 Sgly_1041 Sgly_1041 Sgly_1041 1028169 1030142 - hypothetical protein KEGG: dsy:DSY2017 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1066 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1041 Sgly_1042 Sgly_1042 Sgly_1042 1030789 1031151 - hypothetical protein KEGG: sli:Slin_1014 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1067 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1042 Sgly_1043 Sgly_1043 Sgly_1043 1031156 1031668 - hypothetical protein KEGG: dae:Dtox_0389 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1068 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1043 Sgly_1044 Sgly_1044 Sgly_1044 1032072 1032338 - pseudogene gene1069 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1044 Sgly_1045 Sgly_1045 Sgly_1045 1032609 1033046 - hypothetical protein KEGG: dhd:Dhaf_3809 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1070 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1045 Sgly_1046 Sgly_1046 Sgly_1046 1033051 1033938 - hypothetical protein KEGG: dsy:DSY2653 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1071 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1046 Sgly_1047 Sgly_1047 Sgly_1047 1034007 1034570 - RNA polymerase sigma factor%2C sigma-70 family InterPro IPR014284~KEGG: dhd:Dhaf_3811 RNA polymerase%2C sigma-24 subunit%2C ECF subfamily~SPTR: RNA polymerase%2C sigma-24 subunit%2C ECF subfamily%3B~TIGRFAM: RNA polymerase sigma-70~PFAM: Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family gene gene1072 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1047 Sgly_1048 Sgly_1048 Sgly_1048 1034973 1036133 + hypothetical protein KEGG: hmo:HM1_1572 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1073 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1048 Sgly_1049 Sgly_1049 Sgly_1049 1036426 1038618 - Catalase-peroxidase COGs: COG0376 Catalase (peroxidase I)~HAMAP: Catalase-peroxidase haem~InterPro IPR000763: IPR002016~KEGG: dae:Dtox_0871 catalase/peroxidase HPI~PFAM: Haem peroxidase%2C plant/fungal/bacterial~PRIAM: Catalase~SPTR: Catalase-peroxidase%3B~TIGRFAM: Catalase-peroxidase haem~PFAM: Peroxidase~TIGRFAM: catalase/peroxidase HPI gene gene1074 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1049 Sgly_1050 Sgly_1050 Sgly_1050 1039071 1039214 + pseudogene gene1075 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1050 Sgly_1051 Sgly_1051 Sgly_1051 1039211 1039558 + hypothetical protein KEGG: cpy:Cphy_1791 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1076 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1051 Sgly_1052 Sgly_1052 Sgly_1052 1039565 1040071 + VanZ family protein InterPro IPR006976~KEGG: xce:Xcel_1422 VanZ family protein~PFAM: VanZ-like~SPTR: VanZ family protein%3B~PFAM: VanZ like family gene gene1077 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1052 Sgly_1053 Sgly_1053 Sgly_1053 1040071 1040157 + pseudogene gene1078 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1053 Sgly_1054 Sgly_1054 Sgly_1054 1040147 1040602 - response regulator receiver protein InterPro IPR001789~KEGG: dhd:Dhaf_4095 response regulator receiver protein~PFAM: Signal transduction response regulator%2C receiver domain~SMART: Signal transduction response regulator%2C receiver domain~SPTR: Putative uncharacterized protein%3B~PFAM: Response regulator receiver domain gene gene1079 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1054 Sgly_1055 Sgly_1055 Sgly_1055 1040599 1040952 - helix-turn-helix domain protein InterPro IPR001387~KEGG: dae:Dtox_1519 transcriptional regulator%2C XRE family~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3~SPTR: Putative uncharacterized protein%3B~PFAM: Helix-turn-helix gene gene1080 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1055 Sgly_1056 Sgly_1056 Sgly_1056 1041069 1041665 - hypothetical protein KEGG: bfr:BF2867 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1273) gene gene1081 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1056 Sgly_1057 Sgly_1057 Sgly_1057 1042387 1043619 + DNA polymerase III%2C epsilon subunit COGs: COG0847 DNA polymerase III epsilon subunit and related 3'-5' exonuclease~InterPro IPR006054: IPR006055: IPR013520: IPR001357~KEGG: sna:Snas_2943 exonuclease RNase T and DNA polymerase III~PFAM: Exonuclease%2C RNase T/DNA polymerase III%3B BRCT~SMART: Exonuclease~SPTR: Exonuclease RNase T and DNA polymerase III%3B~TIGRFAM: DNA polymerase III%2C epsilon subunit~PFAM: Exonuclease~TIGRFAM: exonuclease%2C DNA polymerase III%2C epsilon subunit family gene gene1082 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1057 Sgly_1058 Sgly_1058 Sgly_1058 1043680 1049658 + putative DNA helicase COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits~KEGG: pjd:Pjdr2_4661 putative DNA helicase~SPTR: Putative DNA helicase%3B~PFAM: Protein of unknown function (DUF3320) gene gene1083 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1058 Sgly_1059 Sgly_1059 Sgly_1059 1049771 1051837 + hypothetical protein KEGG: hch:HCH_06546 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Archaeal ATPase gene gene1084 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1059 Sgly_1060 Sgly_1060 Sgly_1060 1052099 1052548 + hypothetical protein KEGG: sul:SYO3AOP1_1556 transposase IS116/IS110/IS902 family protein~SPTR: Transposase IS116/IS110/IS902 family protein gene gene1085 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1060 Sgly_1061 Sgly_1061 Sgly_1061 1052813 1053067 + hypothetical protein KEGG: ckr:CKR_2708 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1086 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1061 Sgly_1062 Sgly_1062 Sgly_1062 1053051 1053302 + addiction module antitoxin KEGG: tpd:Teth39_1670 addiction module antitoxin~SPTR: Putative uncharacterized protein gene gene1087 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1062 Sgly_1063 Sgly_1063 Sgly_1063 1053516 1055101 + pseudogene gene1088 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1063 Sgly_1064 Sgly_1064 Sgly_1064 1055293 1057779 - Domain of unknown function DUF2357-containing protein COGs: COG1700 conserved hypothetical protein~InterPro IPR018633: IPR007505~KEGG: dsy:DSY0684 hypothetical protein~PFAM: Domain of unknown function DUF2357%3B Protein of unknown function DUF524~SPTR: Putative uncharacterized protein%3B~PFAM: Domain of unknown function (DUF2357)%3B Protein of unknown function (DUF524) gene gene1089 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1064 Sgly_1065 Sgly_1065 Sgly_1065 1057754 1059976 - ATPase associated with various cellular activities AAA_5 COGs: COG1401 GTPase subunit of restriction endonuclease~InterPro IPR011704~KEGG: tmt:Tmath_1395 ATPase associated with various cellular activities AAA_5~PFAM: ATPase%2C AAA-5~SPTR: ATPase associated with various cellular activities AAA_5%3B~PFAM: AAA domain (dynein-related subfamily)%3B Domain of unknown function (DUF3578) gene gene1090 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1065 Sgly_1066 Sgly_1066 Sgly_1066 1060423 1060794 + hypothetical protein KEGG: tjr:TherJR_1078 tetratricopeptide TPR_2 repeat protein~SPTR: Tetratricopeptide TPR_2 repeat protein gene gene1091 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1066 Sgly_1067 Sgly_1067 Sgly_1067 1061103 1064072 + putative DNA helicase COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits~KEGG: amt:Amet_0224 putative DNA helicase~SPTR: Putative DNA helicase gene gene1092 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1067 Sgly_1068 Sgly_1068 Sgly_1068 1064093 1064501 + pseudogene gene1093 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1068 Sgly_1069 Sgly_1069 Sgly_1069 1064573 1068766 + hypothetical protein COGs: COG5635 NTPase (NACHT family)~KEGG: ana:alr9018 hypothetical protein~SPTR: Alr9018 protein gene gene1094 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1069 Sgly_1070 Sgly_1070 Sgly_1070 1069045 1069194 - hypothetical protein KEGG: dhd:Dhaf_3323 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF2922) gene gene1095 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1070 Sgly_1071 Sgly_1071 Sgly_1071 1069554 1069775 + hypothetical protein KEGG: aae:aq_468 cation efflux system (CzcB-like)~SPTR: Putative uncharacterized protein gene gene1096 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1071 Sgly_1072 Sgly_1072 Sgly_1072 1069772 1070188 + PilT protein domain protein InterPro IPR002716~KEGG: slp:Slip_0190 PilT protein domain protein~PFAM: PilT protein%2C N-terminal~SPTR: Toxin-antitoxin system%2C toxin component%2C PIN family%3B~PFAM: PIN domain gene gene1097 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1072 Sgly_1073 Sgly_1073 Sgly_1073 1070522 1070761 - hypothetical protein KEGG: dhd:Dhaf_3323 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF2922) gene gene1098 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1073 Sgly_1074 Sgly_1074 Sgly_1074 1070793 1071017 - protein of unknown function DUF1659 InterPro IPR012454~KEGG: dhd:Dhaf_3322 protein of unknown function DUF1659~PFAM: Protein of unknown function DUF1659~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1659) gene gene1099 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1074 Sgly_1075 Sgly_1075 Sgly_1075 1071171 1072013 - hypothetical protein KEGG: dhd:Dhaf_3324 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF3102) gene gene1100 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1075 Sgly_1076 Sgly_1076 Sgly_1076 1072207 1072602 + hypothetical protein KEGG: dsy:DSY3841 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1101 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1076 Sgly_1077 Sgly_1077 Sgly_1077 1072592 1073503 - pseudouridine synthase%2C RluA family COGs: COG0564 Pseudouridylate synthase 23S RNA-specific~InterPro IPR006225: IPR006145~KEGG: bts:Btus_2266 pseudouridine synthase%2C RluA family~PFAM: Pseudouridine synthase%2C RsuA and RluB/C/D/E/F~SPTR: Pseudouridine synthase%3B~TIGRFAM: Pseudouridine synthase%2C RluC/RluD~PFAM: RNA pseudouridylate synthase~TIGRFAM: pseudouridine synthase%2C RluA family gene gene1102 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1077 Sgly_1078 Sgly_1078 Sgly_1078 1073571 1074629 - hypothetical protein KEGG: dae:Dtox_1361 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1103 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1078 Sgly_1079 Sgly_1079 Sgly_1079 1074622 1075590 - hypothetical protein KEGG: dae:Dtox_1360 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1104 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1079 Sgly_1080 Sgly_1080 Sgly_1080 1075592 1076101 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog~InterPro IPR014284: IPR007627: IPR013249~KEGG: dae:Dtox_1359 RNA polymerase%2C sigma-24 subunit%2C ECF subfamily~PFAM: RNA polymerase sigma-70 region 2%3B RNA polymerase sigma factor 70%2C region 4 type 2~SPTR: RNA polymerase%2C sigma-24 subunit%2C ECF subfamily%3B~TIGRFAM: RNA polymerase sigma-70~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family%3B RNA polymerase sigma factor%2C SigM family gene gene1105 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1080 Sgly_1081 Sgly_1081 Sgly_1081 1076803 1077162 + hypothetical protein KEGG: ccb:Clocel_2527 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1106 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1081 Sgly_1082 Sgly_1082 Sgly_1082 1077167 1077889 + serine/threonine protein kinase COGs: COG0515 Serine/threonine protein kinase~InterPro IPR020635: IPR002290: IPR017442~KEGG: ccb:Clocel_2526 serine/threonine protein kinase~PFAM: Serine/threonine-protein kinase-like domain~SMART: Serine/threonine-protein kinase domain%3B Tyrosine-protein kinase%2C catalytic domain~SPTR: Serine/threonine protein kinase%3B~PFAM: Protein kinase domain gene gene1107 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1082 Sgly_1083 Sgly_1083 Sgly_1083 1078064 1078480 + DNA polymerase beta domain protein region COGs: COG1669 nucleotidyltransferase~InterPro IPR002934~KEGG: dhd:Dhaf_1803 DNA polymerase beta domain protein region~PFAM: Nucleotidyltransferase~SPTR: DNA polymerase beta domain protein region%3B~PFAM: Nucleotidyltransferase domain gene gene1108 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1083 Sgly_1084 Sgly_1084 Sgly_1084 1078659 1078780 + pseudogene gene1109 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1084 Sgly_1085 Sgly_1085 Sgly_1085 1078797 1078940 + hypothetical protein gene gene1110 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1085 Sgly_1086 Sgly_1086 Sgly_1086 1079037 1079732 + two component transcriptional regulator%2C winged helix family COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR001789: IPR001867~KEGG: bmd:BMD_3900 two-component response regulator CssR~PFAM: Signal transduction response regulator%2C C-terminal%3B Signal transduction response regulator%2C receiver domain~SMART: Signal transduction response regulator%2C receiver domain~SPTR: Two-component response regulator CssR%3B~PFAM: Response regulator receiver domain%3B Transcriptional regulatory protein%2C C terminal gene gene1111 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1086 Sgly_1087 Sgly_1087 Sgly_1087 1080015 1080806 + flagellar hook capping protein COGs: COG1843 Flagellar hook capping protein~InterPro IPR005648~KEGG: cth:Cthe_0472 flagellar hook capping protein~PFAM: Flagellar hook capping protein~SPTR: Flagellar hook capping protein%3B~PFAM: Flagellar hook capping protein gene gene1112 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1087 Sgly_1088 Sgly_1088 Sgly_1088 1080837 1082180 + fagellar hook-basal body protein COGs: COG1749 Flagellar hook protein FlgE~InterPro IPR020013: IPR001444: IPR011491: IPR010930~KEGG: cth:Cthe_0474 protein of unknown function DUF1078-like protein~PFAM: Flagellar basal body FlaE%3B Flagellar basal body rod protein%2C N-terminal%3B Protein of unknown function DUF1078%2C C-terminal~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Fagellar hook-basal body protein%2C FlgE/F/G~PFAM: Domain of unknown function (DUF1078)%3B Flagella basal body rod protein%3B Flagellar basal body protein FlaE~TIGRFAM: fagellar hook-basal body proteins%3B flagellar basal-body rod protein FlgB gene gene1113 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1088 Sgly_1089 Sgly_1089 Sgly_1089 1082223 1083746 + flagellar hook-associated protein FlgK COGs: COG1256 Flagellar hook-associated protein~InterPro IPR002371: IPR001444: IPR010930~KEGG: cth:Cthe_2244 flagellar hook-associated protein FlgK~PFAM: Protein of unknown function DUF1078%2C C-terminal%3B Flagellar basal body rod protein%2C N-terminal~SPTR: Flagellar hook-associated protein FlgK%3B~TIGRFAM: Flagellar hook-associated protein%2C FlgK~PFAM: Domain of unknown function (DUF1078)%3B Flagella basal body rod protein~TIGRFAM: flagellar hook-associated protein FlgK gene gene1114 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1089 Sgly_1090 Sgly_1090 Sgly_1090 1083752 1085290 + flagellar hook-associated protein FlgK COGs: COG1256 Flagellar hook-associated protein~InterPro IPR002371: IPR001444: IPR010930~KEGG: cth:Cthe_2243 flagellar hook-associated protein FlgK~PFAM: Protein of unknown function DUF1078%2C C-terminal%3B Flagellar basal body rod protein%2C N-terminal~SPTR: Flagellar hook-associated protein FlgK%3B~TIGRFAM: Flagellar hook-associated protein%2C FlgK~PFAM: Domain of unknown function (DUF1078)~TIGRFAM: flagellar hook-associated protein FlgK gene gene1115 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1090 Sgly_1091 Sgly_1091 Sgly_1091 1085304 1086680 + flagellar hook-associated protein 3 COGs: COG1344 Flagellin and related hook-associated protein~InterPro IPR013384: IPR001492~KEGG: cth:Cthe_2242 flagellar hook-associated protein FlgL~PFAM: Flagellin%2C N-terminal~SPTR: Flagellar hook-associated protein 3%3B~TIGRFAM: Flagellar hook-associated protein 3~PFAM: Bacterial flagellin N-terminal helical region~TIGRFAM: flagellar hook-associated protein 3 gene gene1116 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1091 Sgly_1092 Sgly_1092 Sgly_1092 1086694 1088595 + flagellar hook-associated 2 domain-containing protein COGs: COG1345 Flagellar capping protein~InterPro IPR003481: IPR010809~KEGG: cth:Cthe_2218 flagellar hook-associated 2-like protein~PFAM: Flagellar hook-associated 2%2C C-terminal%3B Flagellar hook-associated protein 2%2C N-terminal~SPTR: Flagellar hook-associated 2-like protein%3B~PFAM: Flagellar hook-associated protein 2 C-terminus gene gene1117 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1092 Sgly_1093 Sgly_1093 Sgly_1093 1088608 1089039 + cholesterol 24-hydroxylase KEGG: mcc:705843 cholesterol 24-hydroxylase-like~SPTR: cDNA FLJ33567 fis%2C clone BRAMY2010272%2C highly similar to Homo sapiens cholesterol 24-hydroxylase mRNA gene gene1118 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1093 Sgly_1094 Sgly_1094 Sgly_1094 1089147 1089395 + carbon storage regulator InterPro IPR003751~KEGG: cbt:CLH_3180 putative carbon storage regulator~PFAM: Carbon storage regulator~SPTR: Carbon storage regulator%3B~PFAM: Global regulator protein family~TIGRFAM: carbon storage regulator (csrA) gene gene1119 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1094 Sgly_1095 Sgly_1095 Sgly_1095 1089460 1090701 + flagellin domain protein COGs: COG1344 Flagellin and related hook-associated protein~InterPro IPR001492: IPR001029~KEGG: dau:Daud_1781 flagellin domain-containing protein~PFAM: Flagellin%2C N-terminal%3B Flagellin%2C C-terminal helical region~SPTR: Flagellin domain protein%3B~PFAM: Bacterial flagellin N-terminal helical region%3B Bacterial flagellin C-terminal helical region gene gene1120 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1095 Sgly_1096 Sgly_1096 Sgly_1096 1090796 1091200 + flagellar protein FliS COGs: COG1516 Flagellin-specific chaperone FliS~InterPro IPR003713~KEGG: cce:Ccel_0106 flagellar protein FliS~PFAM: Flagellar protein FliS~SPTR: Flagellar protein FliS%3B~TIGRFAM: Flagellar protein FliS~PFAM: Flagellar protein FliS~TIGRFAM: flagellar biosynthetic protein FliS gene gene1121 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1096 Sgly_1097 Sgly_1097 Sgly_1097 1091330 1093339 + integral membrane sensor signal transduction histidine kinase COGs: COG0642 Signal transduction histidine kinase~InterPro IPR003661: IPR003594~KEGG: ckr:CKR_1218 hypothetical protein~PFAM: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain~SMART: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain~SPTR: Putative multi-sensor signal transduction histidine kinase%3B~PFAM: 7TM diverse intracellular signalling%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain gene gene1122 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1097 Sgly_1098 Sgly_1098 Sgly_1098 1093415 1094101 - two component transcriptional regulator%2C winged helix family COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR001789: IPR001867~KEGG: cby:CLM_0936 DNA-binding response regulator~PFAM: Signal transduction response regulator%2C receiver domain%3B Signal transduction response regulator%2C C-terminal~SMART: Signal transduction response regulator%2C receiver domain~SPTR: Putative uncharacterized protein%3B~PFAM: Response regulator receiver domain%3B Transcriptional regulatory protein%2C C terminal gene gene1123 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1098 Sgly_1099 Sgly_1099 Sgly_1099 1094604 1094891 + addiction module antitoxin%2C RelB/DinJ family InterPro IPR007337~KEGG: san:gbs0471 hypothetical protein~PFAM: RelB antitoxin~SPTR: Addiction module antitoxin%2C RelB/DinJ family%3B~TIGRFAM: RelB antitoxin~PFAM: RelB antitoxin~TIGRFAM: addiction module antitoxin%2C RelB/DinJ family gene gene1124 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1099 Sgly_1100 Sgly_1100 Sgly_1100 1094878 1095192 + hypothetical protein KEGG: dae:Dtox_0866 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1125 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1100 Sgly_1101 Sgly_1101 Sgly_1101 1095451 1095750 + hypothetical protein KEGG: dba:Dbac_3131 peptidase A24A domain protein~SPTR: Peptidase A24A domain protein%3B~PFAM: Protein of unknown function (DUF2442) gene gene1126 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1101 Sgly_1102 Sgly_1102 Sgly_1102 1095774 1100597 + cell wall binding repeat 2-containing protein COGs: COG2247 Putative cell wall-binding domain~InterPro IPR007253~KEGG: dsy:DSY1962 hypothetical protein~PFAM: Putative cell wall binding repeat 2~SPTR: Putative uncharacterized protein%3B~PFAM: Putative cell wall binding repeat 2 gene gene1127 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1102 Sgly_1103 Sgly_1103 Sgly_1103 1100964 1101161 + Protein of unknown function DUF2191 InterPro IPR019239~KEGG: tde:TDE0878 hypothetical protein~PFAM: Protein of unknown function DUF2191~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterized protein conserved in bacteria (DUF2191) gene gene1128 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1103 Sgly_1104 Sgly_1104 Sgly_1104 1101164 1101553 + PilT protein domain protein InterPro IPR002716~KEGG: gur:Gura_0946 PilT domain-containing protein~PFAM: PilT protein%2C N-terminal~SPTR: PilT protein domain protein%3B~PFAM: PIN domain gene gene1129 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1104 Sgly_1105 Sgly_1105 Sgly_1105 1101738 1102457 - amino acid ABC transporter membrane protein 2%2C PAAT family COGs: COG0765 ABC-type amino acid transport system permease component~InterPro IPR010065: IPR000515~KEGG: bmd:BMD_1575 putative amino acid ABC transporter permease~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Putative amino acid ABC transporter%2C permease protein%3B~TIGRFAM: Amino acid ABC transporter%2C permease protein%2C 3-TM domain%2C His/Glu/Gln/Arg/opine family~PFAM: Binding-protein-dependent transport system inner membrane component~TIGRFAM: amine acid ABC transporter%2C permease protein%2C 3-TM region%2C His/Glu/Gln/Arg/opine family gene gene1130 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1105 Sgly_1106 Sgly_1106 Sgly_1106 1102473 1103174 - amino acid ABC transporter membrane protein 1%2C PAAT family COGs: COG0765 ABC-type amino acid transport system permease component~InterPro IPR010065: IPR000515~KEGG: bmq:BMQ_1594 putative amino acid ABC transporter%2C permease protein~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Putative amino acid ABC transporter%2C permease protein%3B~TIGRFAM: Amino acid ABC transporter%2C permease protein%2C 3-TM domain%2C His/Glu/Gln/Arg/opine family~PFAM: Binding-protein-dependent transport system inner membrane component~TIGRFAM: amine acid ABC transporter%2C permease protein%2C 3-TM region%2C His/Glu/Gln/Arg/opine family gene gene1131 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1106 Sgly_1107 Sgly_1107 Sgly_1107 1103249 1104097 - amino acid ABC transporter substrate-binding protein%2C PAAT family COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain~InterPro IPR001638~KEGG: bmq:BMQ_1595 putative amino acid ABC transporter%2C amino acid-binding protein~PFAM: Extracellular solute-binding protein%2C family 3~SMART: Extracellular solute-binding protein%2C family 3~SPTR: Putative amino acid ABC transporter%2C amino acid-binding protein%3B~PFAM: Bacterial extracellular solute-binding proteins%2C family 3 gene gene1132 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1107 Sgly_1108 Sgly_1108 Sgly_1108 1104222 1104722 - hypothetical protein KEGG: tsi:TSIB_0170 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1133 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1108 Sgly_1109 Sgly_1109 Sgly_1109 1104747 1105868 - Glycine oxidase COGs: COG0665 Glycine/D-amino acid oxidase (deaminating)~InterPro IPR006076~KEGG: dat:HRM2_29060 SoxB2~PFAM: FAD dependent oxidoreductase~PRIAM: Glycine oxidase~SPTR: FAD dependent oxidoreductase%3B~PFAM: FAD dependent oxidoreductase gene gene1134 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1109 Sgly_1110 Sgly_1110 Sgly_1110 1105861 1106631 - BFD domain protein (2Fe-2S)-binding domain protein InterPro IPR007419~KEGG: ckr:CKR_1804 hypothetical protein~PFAM: BFD-like [2Fe-2S]-binding domain~SPTR: BFD domain protein (2Fe-2S)-binding domain protein%3B~PFAM: BFD-like [2Fe-2S] binding domain gene gene1135 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1110 Sgly_1111 Sgly_1111 Sgly_1111 1106628 1107728 - FAD-dependent pyridine nucleotide-disulfide oxidoreductase COGs: COG0492 Thioredoxin reductase~InterPro IPR013027~KEGG: ckr:CKR_1805 hypothetical protein~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~SPTR: HI0933 family protein%3B~PFAM: Pyridine nucleotide-disulphide oxidoreductase gene gene1136 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1111 Sgly_1112 Sgly_1112 Sgly_1112 1107721 1108041 - hypothetical protein KEGG: ssm:Spirs_2834 hypothetical protein~SPTR: Sarcosine oxidase%2C subunit alpha gene gene1137 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1112 Sgly_1113 Sgly_1113 Sgly_1113 1108133 1109740 - gamma-glutamyltransferase 2 COGs: COG0405 Gamma-glutamyltransferase~InterPro IPR000101~KEGG: sth:STH3166 gamma-glutamyltranspeptidase~PFAM: Gamma-glutamyltranspeptidase~PRIAM: Gamma-glutamyltransferase~SPTR: Gamma-glutamyltransferase%3B~TIGRFAM: Gamma-glutamyltranspeptidase~PFAM: Gamma-glutamyltranspeptidase~TIGRFAM: gamma-glutamyltranspeptidase gene gene1138 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1113 Sgly_1114 Sgly_1114 Sgly_1114 1109789 1110541 - amino acid ABC transporter ATP-binding protein%2C PAAT family COGs: COG1126 ABC-type polar amino acid transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: lsp:Bsph_4684 amino-acid ABC transporter ATP-binding protein~PFAM: ABC transporter-like~PRIAM: Phosphonate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Probable amino-acid ABC transporter ATP-binding protein%3B~PFAM: ABC transporter gene gene1139 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1114 Sgly_1115 Sgly_1115 Sgly_1115 1111241 1112533 + protein of unknown function DUF21 COGs: COG1253 Hemolysins and related protein containing CBS domains~InterPro IPR002550: IPR000644: IPR005170~KEGG: cbe:Cbei_2190 hypothetical protein~PFAM: Protein of unknown function DUF21%3B Cystathionine beta-synthase%2C core%3B Transporter-associated domain~SPTR: Putative uncharacterized protein%3B~PFAM: CBS domain%3B Domain of unknown function DUF21%3B Transporter associated domain gene gene1140 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1115 Sgly_1116 Sgly_1116 Sgly_1116 1112656 1113657 + hypothetical protein COGs: COG1533 DNA repair photolyase~KEGG: swo:Swol_1838 hypothetical protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: spore photoproduct lyase gene gene1141 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1116 Sgly_1117 Sgly_1117 Sgly_1117 1113822 1114166 + hypothetical protein KEGG: pth:PTH_0034 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1142 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1117 Sgly_1118 Sgly_1118 Sgly_1118 1114375 1114527 + hypothetical protein gene gene1143 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1118 Sgly_1119 Sgly_1119 Sgly_1119 1114605 1116527 + putative serine protein kinase%2C PrkA COGs: COG2766 Putative Ser protein kinase~InterPro IPR013153: IPR010650~KEGG: clj:CLJU_c04350 putative serine kinase~PFAM: PrkA AAA%3B PrkA serine kinase~SMART: PrkA AAA~SPTR: Putative kinase PrkA%3B~PFAM: PrkA AAA domain%3B PrkA serine protein kinase C-terminal domain gene gene1144 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1119 Sgly_1120 Sgly_1120 Sgly_1120 1116532 1117728 + UPF0229 protein yeaH COGs: COG2718 conserved hypothetical protein~HAMAP: UPF0229 protein yeaH~InterPro IPR014230: IPR006698~KEGG: cth:Cthe_1204 hypothetical protein~PFAM: Protein of unknown function DUF444~SPTR: UPF0229 protein CLCAR_0966/CcarbDRAFT_1092%3B~TIGRFAM: Sporulation protein YhbH~PFAM: Protein of unknown function (DUF444)~TIGRFAM: sporulation protein YhbH gene gene1145 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1120 Sgly_1121 Sgly_1121 Sgly_1121 1117732 1119072 + SpoVR family protein COGs: COG2719 conserved hypothetical protein~InterPro IPR007390~KEGG: ccb:Clocel_0085 SpoVR family protein~PFAM: Sporulation stage V%2C protein R~SPTR: SpoVR family protein%3B~PFAM: SpoVR like protein gene gene1146 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1121 Sgly_1122 Sgly_1122 Sgly_1122 1119366 1119722 + hypothetical protein KEGG: btb:BMB171_P0134 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1147 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1122 Sgly_1123 Sgly_1123 Sgly_1123 1119725 1119928 + transcriptional regulator%2C XRE family COGs: COG1476 transcriptional regulator protein~InterPro IPR001387~KEGG: clj:CLJU_c19380 hypothetical protein~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3~SPTR: Conserved protein with HTH domain%3B~PFAM: Helix-turn-helix gene gene1148 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1123 Sgly_1124 Sgly_1124 Sgly_1124 1120095 1120490 + hypothetical protein KEGG: ote:Oter_1132 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1149 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1124 Sgly_1125 Sgly_1125 Sgly_1125 1120440 1121735 - major facilitator superfamily MFS_1 COGs: COG2814 Arabinose efflux permease~InterPro IPR011701~KEGG: aci:ACIAD1681 major facilitator superfamily cis%2Ccis-muconate transporter~PFAM: Major facilitator superfamily MFS-1~SPTR: Major facilitator superfamily transporter permease%3B~PFAM: Major Facilitator Superfamily~TIGRFAM: benzoate transport gene gene1150 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1125 Sgly_1126 Sgly_1126 Sgly_1126 1122006 1122467 + MaoC domain protein dehydratase KEGG: htu:Htur_2338 MaoC domain protein dehydratase~SPTR: MaoC domain protein dehydratase gene gene1151 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1126 Sgly_1127 Sgly_1127 Sgly_1127 1122467 1122892 + MaoC domain protein dehydratase COGs: COG2030 Acyl dehydratase~InterPro IPR002539~KEGG: rpt:Rpal_3724 MaoC domain protein dehydratase~PFAM: MaoC-like dehydratase~SPTR: MaoC domain protein dehydratase%3B~PFAM: MaoC like domain gene gene1152 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1127 Sgly_1128 Sgly_1128 Sgly_1128 1123029 1124249 - Formyl-CoA transferase COGs: COG1804 acyl-CoA transferase/carnitine dehydratase~InterPro IPR003673~KEGG: cdl:CDR20291_0366 isocaprenoyl-CoA:2-hydroxyisocaproate CoA-transferase~PFAM: CoA-transferase family III~PRIAM: Formyl-CoA transferase~SPTR: Isocaprenoyl-CoA:2-hydroxyisocaproate CoA-transferase%3B~PFAM: CoA-transferase family III gene gene1153 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1128 Sgly_1129 Sgly_1129 Sgly_1129 1124267 1125790 - o-succinylbenzoate--CoA ligase COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II~InterPro IPR000873~KEGG: rca:Rcas_1775 AMP-dependent synthetase and ligase~PFAM: AMP-dependent synthetase/ligase~PRIAM: o-succinylbenzoate--CoA ligase~SPTR: AMP-dependent synthetase and ligase%3B~PFAM: AMP-binding enzyme gene gene1154 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1129 Sgly_1130 Sgly_1130 Sgly_1130 1126112 1126714 + transcriptional regulator%2C TetR family COGs: COG1309 Transcriptional regulator~InterPro IPR001647~KEGG: cac:CA_C2605 TetR/AcrR family transcriptional regulator~PFAM: Transcription regulator%2C TetR-like%2C DNA-binding%2C bacterial/archaeal~SPTR: Transcriptional regulator (TetR/AcrR family)%3B~PFAM: Bacterial regulatory proteins%2C tetR family%3B YsiA-like protein%2C C-terminal region gene gene1155 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1130 Sgly_1131 Sgly_1131 Sgly_1131 1127079 1128491 + sodium/sulphate symporter COGs: COG0471 Di- and tricarboxylate transporter~InterPro IPR001898~KEGG: pth:PTH_2292 di- and tricarboxylate transporters~PFAM: Sodium/sulphate symporter~SPTR: Putative uncharacterized protein%3B~PFAM: Sodium:sulfate symporter transmembrane region~TIGRFAM: anion transporter gene gene1156 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1131 Sgly_1132 Sgly_1132 Sgly_1132 1128563 1129717 + Butyryl-CoA dehydrogenase COGs: COG1960 Acyl-CoA dehydrogenase~InterPro IPR006092: IPR006091: IPR006090~KEGG: drm:Dred_1490 butyryl-CoA dehydrogenase~PFAM: Acyl-CoA oxidase/dehydrogenase%2C type 1%3B Acyl-CoA oxidase/dehydrogenase%2C central domain%3B Acyl-CoA dehydrogenase%2C N-terminal~PRIAM: Butyryl-CoA dehydrogenase~SPTR: Acyl-CoA dehydrogenases%3B~PFAM: Acyl-CoA dehydrogenase%2C C-terminal domain%3B Acyl-CoA dehydrogenase%2C middle domain%3B Acyl-CoA dehydrogenase%2C N-terminal domain gene gene1157 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1132 Sgly_1133 Sgly_1133 Sgly_1133 1129755 1131038 + Electron-transferring-flavoprotein dehydrogenase COGs: COG0644 Dehydrogenase (flavoprotein)~InterPro IPR006076~KEGG: pth:PTH_0018 dehydrogenases~PFAM: FAD dependent oxidoreductase~PRIAM: Electron-transferring-flavoprotein dehydrogenase~SPTR: Dehydrogenases%3B~PFAM: FAD dependent oxidoreductase gene gene1158 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1133 Sgly_1134 Sgly_1134 Sgly_1134 1131035 1131337 + 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein COGs: COG2440 Ferredoxin-like protein~KEGG: sfu:Sfum_3926 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein~SPTR: 4Fe-4S ferredoxin%2C iron-sulfur binding domain protein gene gene1159 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1134 Sgly_1135 Sgly_1135 Sgly_1135 1131371 1132159 + Electron transfer flavoprotein alpha/beta-subunit COGs: COG2086 Electron transfer flavoprotein beta subunit~InterPro IPR014730~KEGG: clj:CLJU_c39410 electron transfer flavoprotein subunit beta~PFAM: Electron transfer flavoprotein%2C alpha/beta-subunit%2C N-terminal~SPTR: Electron transfer flavoprotein beta-subunit%3B~PFAM: Electron transfer flavoprotein domain gene gene1160 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1135 Sgly_1136 Sgly_1136 Sgly_1136 1132172 1133176 + Electron transfer flavoprotein alpha subunit COGs: COG2025 Electron transfer flavoprotein alpha subunit~InterPro IPR014730: IPR014731~KEGG: clj:CLJU_c39400 electron transfer flavoprotein subunit alpha~PFAM: Electron transfer flavoprotein%2C alpha subunit%2C C-terminal%3B Electron transfer flavoprotein%2C alpha/beta-subunit%2C N-terminal~SPTR: Electron transfer flavoprotein alpha subunit%3B~PFAM: Electron transfer flavoprotein domain%3B Electron transfer flavoprotein FAD-binding domain gene gene1161 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1136 Sgly_1137 Sgly_1137 Sgly_1137 1133383 1133824 + pseudogene gene1162 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1137 Sgly_1138 Sgly_1138 Sgly_1138 1133891 1135270 + Aldehyde Dehydrogenase COGs: COG1012 NAD-dependent aldehyde dehydrogenase~InterPro IPR015590~KEGG: cbb:CLD_3461 aldehyde dehydrogenase family protein~PFAM: Aldehyde dehydrogenase~SPTR: Aldehyde dehydrogenase%3B~PFAM: Aldehyde dehydrogenase family gene gene1163 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1138 Sgly_1139 Sgly_1139 Sgly_1139 1135603 1136751 + DEAD/DEAH box helicase domain protein COGs: COG0513 Superfamily II DNA and RNA helicase~InterPro IPR014001: IPR001650: IPR011545~KEGG: phe:Phep_3476 DEAD/DEAH box helicase domain protein~PFAM: DNA/RNA helicase%2C DEAD/DEAH box type%2C N-terminal%3B DNA/RNA helicase%2C C-terminal~SMART: DEAD-like helicase%2C N-terminal%3B DNA/RNA helicase%2C C-terminal~SPTR: Possible ATP-dependent RNA helicase%3B~PFAM: Helicase conserved C-terminal domain%3B DEAD/DEAH box helicase gene gene1164 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1139 Sgly_1140 Sgly_1140 Sgly_1140 1136917 1137477 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog~InterPro IPR014284: IPR007627: IPR013249~KEGG: cpe:CPE0716 RNA polymerase ECF-type sigma factor~PFAM: RNA polymerase sigma-70 region 2%3B RNA polymerase sigma factor 70%2C region 4 type 2~SPTR: RNA polymerase sigma-70 factor%2C ECF subfamily%3B~TIGRFAM: RNA polymerase sigma-70~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family gene gene1165 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1140 Sgly_1141 Sgly_1141 Sgly_1141 1137464 1138897 + hypothetical protein KEGG: cpe:CPE0717 hypothetical protein~SPTR: Putative uncharacterized protein CPE0717 gene gene1166 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1141 Sgly_1142 Sgly_1142 Sgly_1142 1139089 1139187 - pseudogene gene1167 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1142 Sgly_1143 Sgly_1143 Sgly_1143 1139203 1139499 + pseudogene gene1168 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1143 Sgly_1144 Sgly_1144 Sgly_1144 1139585 1140355 - alpha/beta hydrolase fold protein COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily)~InterPro IPR000073~KEGG: cpf:CPF_0769 alpha/beta fold family hydrolase~PFAM: Alpha/beta hydrolase fold-1~SPTR: Hydrolase%3B~PFAM: alpha/beta hydrolase fold gene gene1169 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1144 Sgly_1145 Sgly_1145 Sgly_1145 1140433 1140723 - hypothetical protein KEGG: ter:Tery_4372 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1170 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1145 Sgly_1146 Sgly_1146 Sgly_1146 1140988 1142253 + hypothetical protein KEGG: bfu:BC1G_15146 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1171 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1146 Sgly_1147 Sgly_1147 Sgly_1147 1142254 1142355 + pseudogene gene1172 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1147 Sgly_1148 Sgly_1148 Sgly_1148 1142383 1143087 + two component transcriptional regulator%2C winged helix family COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR001789: IPR001867~KEGG: btl:BALH_4401 DNA-binding response regulator~PFAM: Signal transduction response regulator%2C receiver domain%3B Signal transduction response regulator%2C C-terminal~SMART: Signal transduction response regulator%2C receiver domain~SPTR: DNA-binding response regulator%3B~PFAM: Response regulator receiver domain%3B Transcriptional regulatory protein%2C C terminal gene gene1173 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1148 Sgly_1149 Sgly_1149 Sgly_1149 1143087 1144067 + integral membrane sensor signal transduction histidine kinase COGs: COG0642 Signal transduction histidine kinase~InterPro IPR003661: IPR003594~KEGG: btb:BMB171_C4475 two component system histidine kinase~PFAM: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain~SMART: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain~SPTR: Putative uncharacterized protein%3B~PFAM: Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase gene gene1174 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1149 Sgly_1150 Sgly_1150 Sgly_1150 1144168 1144929 + Phosphonate-transporting ATPase COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: cby:CLM_0389 peptide ABC transporter%2C Pep4E family%2C ATP-binding protein~PFAM: ABC transporter-like~PRIAM: Phosphonate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related protein%3B~PFAM: ABC transporter gene gene1175 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1150 Sgly_1151 Sgly_1151 Sgly_1151 1144926 1146860 + protein of unknown function DUF214 InterPro IPR003838~KEGG: bcy:Bcer98_3485 hypothetical protein~PFAM: Protein of unknown function DUF214%2C permase predicted~SPTR: ABC transporter permease protein%3B~PFAM: Predicted permease gene gene1176 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1151 Sgly_1152 Sgly_1152 Sgly_1152 1146980 1147612 - regulatory protein TetR InterPro IPR001647~KEGG: cdf:CD0463 TetR family transcriptional regulator~PFAM: Transcription regulator%2C TetR-like%2C DNA-binding%2C bacterial/archaeal~SPTR: Transcriptional regulator%2C TetR family%3B~PFAM: Bacterial regulatory proteins%2C tetR family gene gene1177 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1152 Sgly_1153 Sgly_1153 Sgly_1153 1147742 1147930 + tripartite ATP-independent periplasmic transporter DctQ KEGG: pde:Pden_4716 tripartite ATP-independent periplasmic transporter DctQ~SPTR: Tripartite ATP-independent periplasmic transporter%2C DctQ component gene gene1178 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1153 Sgly_1154 Sgly_1154 Sgly_1154 1148123 1148506 + transcriptional regulator%2C HxlR family COGs: COG1733 transcriptional regulator protein~InterPro IPR002577~KEGG: cdl:CDR20291_1274 putative transcriptional regulator~PFAM: Helix-turn-helix%2C HxlR type~SPTR: Putative transcriptional regulator%3B~PFAM: HxlR-like helix-turn-helix gene gene1179 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1154 Sgly_1155 Sgly_1155 Sgly_1155 1148583 1149131 + isochorismatase hydrolase COGs: COG1335 Amidase related to nicotinamidase~InterPro IPR000868~KEGG: cdl:CDR20291_1273 hypothetical protein~PFAM: Isochorismatase-like~SPTR: Putative isochorismatase (Putative uncharacterized protein)%3B~PFAM: Isochorismatase family gene gene1180 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1155 Sgly_1156 Sgly_1156 Sgly_1156 1149716 1150357 - hypothetical protein KEGG: nth:Nther_0368 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1181 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1156 Sgly_1157 Sgly_1157 Sgly_1157 1150632 1151198 + regulatory protein TetR InterPro IPR001647~KEGG: cac:CA_P0087 TetR/AcrR family transcriptional regulator~PFAM: Transcription regulator%2C TetR-like%2C DNA-binding%2C bacterial/archaeal~SPTR: HTH transcriptional regulator TetR/AcrR family%3B~PFAM: Bacterial regulatory proteins%2C tetR family gene gene1182 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1157 Sgly_1158 Sgly_1158 Sgly_1158 1151200 1152435 + 3-oxoacyl-(acyl-carrier-protein) synthase II COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase~InterPro IPR017568: IPR014030: IPR014031~KEGG: cac:CA_P0088 3-oxoacyl-acyl-carrier protein synthase~PFAM: Beta-ketoacyl synthase%2C N-terminal%3B Beta-ketoacyl synthase%2C C-terminal~PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase II~SPTR: 3-oxoacyl-acyl-carrier protein synthase%3B~TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2~PFAM: Beta-ketoacyl synthase%2C N-terminal domain%3B Beta-ketoacyl synthase%2C C-terminal domain~TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II gene gene1183 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1158 Sgly_1159 Sgly_1159 Sgly_1159 1152540 1153298 - hypothetical protein KEGG: edi:EDI_251580 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1184 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1159 Sgly_1160 Sgly_1160 Sgly_1160 1153493 1154374 + degV family protein COGs: COG1307 conserved hypothetical protein~InterPro IPR003797~KEGG: pmo:Pmob_1310 DegV family protein~PFAM: DegV~SPTR: DegV family protein%3B~TIGRFAM: DegV~PFAM: Uncharacterised protein%2C DegV family COG1307~TIGRFAM: EDD domain protein%2C DegV family gene gene1185 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1160 Sgly_1161 Sgly_1161 Sgly_1161 1154505 1154756 + pseudogene gene1186 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1161 Sgly_1162 Sgly_1162 Sgly_1162 1155193 1155675 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog~InterPro IPR014284: IPR007627: IPR013249~KEGG: dae:Dtox_0859 RNA polymerase%2C sigma-24 subunit%2C ECF subfamily~PFAM: RNA polymerase sigma-70 region 2%3B RNA polymerase sigma factor 70%2C region 4 type 2~SPTR: RNA polymerase%2C sigma-24 subunit%2C ECF subfamily%3B~TIGRFAM: RNA polymerase sigma-70~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family gene gene1187 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1162 Sgly_1163 Sgly_1163 Sgly_1163 1155672 1156001 + hypothetical protein KEGG: dae:Dtox_0858 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1188 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1163 Sgly_1164 Sgly_1164 Sgly_1164 1156020 1156208 + hypothetical protein COGs: COG1129 ABC-type sugar transport system ATPase component~KEGG: ckl:CKL_0068 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1189 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1164 Sgly_1165 Sgly_1165 Sgly_1165 1156312 1157613 + abortive infection protein%2C putative KEGG: cth:Cthe_2132 abortive infection protein%2C putative~SPTR: Abortive infection protein%2C putative gene gene1190 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1165 Sgly_1166 Sgly_1166 Sgly_1166 1157613 1158224 + hypothetical protein KEGG: cth:Cthe_2133 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1191 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1166 Sgly_1167 Sgly_1167 Sgly_1167 1158346 1159017 + protein of unknown function DUF1697 COGs: COG3797 conserved hypothetical protein~InterPro IPR012545~KEGG: pjd:Pjdr2_1914 protein of unknown function DUF1697~PFAM: Protein of unknown function DUF1697~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1697) gene gene1192 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1167 Sgly_1168 Sgly_1168 Sgly_1168 1159224 1159544 + UPF0345 protein yaiE COGs: COG3123 conserved hypothetical protein~HAMAP: Protein of unknown function DUF1255~InterPro IPR009664~KEGG: ccb:Clocel_3895 hypothetical protein~PFAM: Protein of unknown function DUF1255~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1255) gene gene1193 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1168 Sgly_1169 Sgly_1169 Sgly_1169 1159684 1160010 + TfoX domain-containing protein InterPro IPR007076~KEGG: pmz:HMPREF0659_A5556 TfoX N-terminal domain protein~PFAM: TfoX%2C N-terminal~SPTR: Putative uncharacterized protein%3B~PFAM: TfoX N-terminal domain gene gene1194 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1169 Sgly_1170 Sgly_1170 Sgly_1170 1160016 1160891 + hypothetical protein KEGG: cdl:CDR20291_3183 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1195 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1170 Sgly_1171 Sgly_1171 Sgly_1171 1161047 1161268 + pseudogene gene1196 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1171 Sgly_1172 Sgly_1172 Sgly_1172 1161481 1161813 - helix-turn-helix domain protein InterPro IPR001387~KEGG: dhd:Dhaf_2022 transcriptional regulator%2C XRE family~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3~SPTR: Putative uncharacterized protein%3B~PFAM: Helix-turn-helix gene gene1197 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1172 Sgly_1173 Sgly_1173 Sgly_1173 1162052 1164535 + ATP-dependent transcriptional regulator%2C MalT-like%2C LuxR family COGs: COG2909 ATP-dependent transcriptional regulator protein~InterPro IPR000792~KEGG: swo:Swol_1080 ATP-dependent transcriptional regulator-like protein~PFAM: Transcription regulator LuxR%2C C-terminal~SMART: Transcription regulator LuxR%2C C-terminal~SPTR: ATP-dependent transcriptional regulator%2C MalT-like%2C LuxR family%3B~PFAM: Bacterial regulatory proteins%2C luxR family gene gene1198 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1173 Sgly_1174 Sgly_1174 Sgly_1174 1164684 1166753 + CheA signal transduction histidine kinase COGs: COG0643 Chemotaxis protein histidine kinase and related kinase~InterPro IPR008207: IPR003594: IPR002545: IPR004105~KEGG: cce:Ccel_2315 CheA signal transduction histidine kinase~PFAM: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup%2C homodimeric%3B Signal transduction histidine kinase%2C phosphotransfer (Hpt) domain%3B CheW-like protein~SMART: CheW-like protein%3B ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C phosphotransfer (Hpt) domain~SPTR: CheA signal transduction histidine kinase%3B~PFAM: CheW-like domain%3B P2 response regulator binding domain%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B Signal transducing histidine kinase%2C homodimeric domain%3B Hpt domain gene gene1199 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1174 Sgly_1175 Sgly_1175 Sgly_1175 1166806 1167300 + CheW protein COGs: COG0835 Chemotaxis signal transduction protein~InterPro IPR002545~KEGG: dae:Dtox_0612 CheW protein~PFAM: CheW-like protein~SMART: CheW-like protein~SPTR: CheW protein%3B~PFAM: CheW-like domain gene gene1200 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1175 Sgly_1176 Sgly_1176 Sgly_1176 1167315 1168130 + MCP methyltransferase%2C CheR-type COGs: COG1352 Methylase of chemotaxis methyl-accepting protein~InterPro IPR000780~KEGG: cth:Cthe_0808 MCP methyltransferase%2C CheR-type~PFAM: MCP methyltransferase%2C CheR-type~PRIAM: Protein-glutamate O-methyltransferase~SMART: MCP methyltransferase%2C CheR-type~SPTR: MCP methyltransferase%2C CheR-type%3B~PFAM: CheR methyltransferase%2C SAM binding domain%3B CheR methyltransferase%2C all-alpha domain gene gene1201 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1176 Sgly_1177 Sgly_1177 Sgly_1177 1168136 1168729 + CheB methylesterase COGs: COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain~InterPro IPR000673~KEGG: cce:Ccel_2310 CheB methylesterase~PFAM: Signal transduction response regulator%2C chemotaxis%2C protein-glutamate methylesterase~PRIAM: Protein-glutamate methylesterase~SPTR: Response regulator receiver modulated CheB methylesterase%3B~PFAM: CheB methylesterase gene gene1202 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1177 Sgly_1178 Sgly_1178 Sgly_1178 1168739 1169203 + CheD COGs: COG1871 Chemotaxis protein%3B stimulates methylation of MCP protein~KEGG: pca:Pcar_1201 CheD-like chemotaxis protein~SPTR: Probable chemoreceptor glutamine deamidase CheD%3B~PFAM: CheD gene gene1203 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1178 Sgly_1179 Sgly_1179 Sgly_1179 1169223 1171250 + PAS/PAC sensor signal transduction histidine kinase COGs: COG0642 Signal transduction histidine kinase~InterPro IPR000014: IPR003661: IPR003594: IPR013767: IPR 013656~KEGG: cth:Cthe_0806 PAS/PAC sensor hybrid histidine kinase~PFAM: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain%3B PAS fold%3B PAS fold-4~SMART: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain%3B PAS~SPTR: PAS domain S-box domain-containing protein%3B~TIGRFAM: PAS~PFAM: Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain%3B PAS fold~TIGRFAM: PAS domain S-box gene gene1204 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1179 Sgly_1180 Sgly_1180 Sgly_1180 1171254 1171943 + response regulator receiver protein COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR001789~KEGG: dae:Dtox_0617 response regulator receiver protein~PFAM: Signal transduction response regulator%2C receiver domain~SMART: Signal transduction response regulator%2C receiver domain~SPTR: Response regulator receiver domain protein%3B~PFAM: Protein of unknown function (DUF2442)%3B Response regulator receiver domain gene gene1205 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1180 Sgly_1181 Sgly_1181 Sgly_1181 1172066 1173856 + methyl-accepting chemotaxis sensory transducer COGs: COG0840 Methyl-accepting chemotaxis protein~InterPro IPR003660: IPR004089~KEGG: cbt:CLH_2362 methyl-accepting chemotaxis sensory transducer~PFAM: Chemotaxis methyl-accepting receptor%2C signalling%3B HAMP linker domain~SMART: Chemotaxis methyl-accepting receptor%2C signalling%3B HAMP linker domain~SPTR: Methyl-accepting chemotaxis sensory transducer%3B~PFAM: HAMP domain%3B Methyl-accepting chemotaxis protein (MCP) signaling domain gene gene1206 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1181 Sgly_1182 Sgly_1182 Sgly_1182 1174036 1176612 + diguanylate cyclase and metal dependent phosphohydrolase COGs: COG2206 HD-GYP domain~InterPro IPR000014: IPR000160: IPR001610: IPR003607: IPR 013767: IPR013656: IPR006674~KEGG: tai:Taci_0162 diguanylate cyclase and metal dependent phosphohydrolase~PFAM: Diguanylate cyclase%2C predicted%3B PAS fold-4%3B PAS fold%3B Metal-dependent phosphohydrolase%2C HD subdomain~SMART: Diguanylate cyclase%2C predicted%3B PAS%3B PAC motif%3B Metal-dependent phosphohydrolase%2C HD domain~SPTR: Diguanylate cyclase and metal dependent phosphohydrolase%3B~TIGRFAM: Diguanylate cyclase%2C predicted%3B PAS~PFAM: HD domain%3B GGDEF domain%3B PAS fold~TIGRFAM: PAS domain S-box%3B diguanylate cyclase (GGDEF) domain gene gene1207 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1182 Sgly_1183 Sgly_1183 Sgly_1183 1176634 1179225 + diguanylate cyclase and metal dependent phosphohydrolase COGs: COG2206 HD-GYP domain~InterPro IPR000014: IPR000160: IPR006675: IPR003018: IPR 003607: IPR013656: IPR013767: IPR006674~KEGG: amt:Amet_0967 diguanylate cyclase and metal dependent phosphohydrolase~PFAM: Diguanylate cyclase%2C predicted%3B PAS fold%3B PAS fold-4%3B GAF%3B Metal-dependent phosphohydrolase%2C HD subdomain~SMART: Diguanylate cyclase%2C predicted%3B GAF%3B PAS%3B Metal-dependent phosphohydrolase%2C HD domain~SPTR: Diguanylate cyclase and metal dependent phosphohydrolase%3B~TIGRFAM: Diguanylate cyclase%2C predicted%3B PAS%3B HDIG~PFAM: HD domain%3B GGDEF domain%3B PAS fold~TIGRFAM: PAS domain S-box%3B diguanylate cyclase (GGDEF) domain%3B uncharacterized domain HDIG gene gene1208 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1183 Sgly_1184 Sgly_1184 Sgly_1184 1179400 1179486 + pseudogene gene1209 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1184 Sgly_1185 Sgly_1185 Sgly_1185 1179497 1180327 - nitroreductase COGs: COG0778 Nitroreductase~InterPro IPR000415~KEGG: cbe:Cbei_3526 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein~PFAM: Nitroreductase-like~SPTR: 4Fe-4S ferredoxin%2C iron-sulfur binding domain protein%3B~PFAM: Nitroreductase family gene gene1210 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1185 Sgly_1186 Sgly_1186 Sgly_1186 1180330 1181013 - hypothetical protein KEGG: lgs:LEGAS_0965 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1211 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1186 Sgly_1187 Sgly_1187 Sgly_1187 1181325 1182239 - helix-turn-helix%2C type 11 domain-containing protein COGs: COG2378 transcriptional regulator protein~KEGG: cbe:Cbei_3345 helix-turn-helix%2C type 11 domain-containing protein~SPTR: Helix-turn-helix%2C type 11 domain protein%3B~PFAM: HTH domain gene gene1212 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1187 Sgly_1188 Sgly_1188 Sgly_1188 1182850 1183260 + hypothetical protein KEGG: cth:Cthe_1644 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1213 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1188 Sgly_1189 Sgly_1189 Sgly_1189 1183293 1184291 + phage-associated protein-like protein COGs: COG3600 Uncharacterized phage-associated protein~KEGG: cth:Cthe_1643 phage-associated protein-like protein~SPTR: Uncharacterized phage-associated protein-like protein%3B~TIGRFAM: putative zinc finger/helix-turn-helix protein%2C YgiT family%3B YgiT-type zinc finger domain gene gene1214 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1189 Sgly_1190 Sgly_1190 Sgly_1190 1184488 1186983 - protein of unknown function DUF214 InterPro IPR003838~KEGG: dsy:DSY1067 hypothetical protein~PFAM: Protein of unknown function DUF214%2C permase predicted~SPTR: Putative uncharacterized protein%3B~PFAM: Predicted permease gene gene1215 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1190 Sgly_1191 Sgly_1191 Sgly_1191 1186980 1187657 - Phosphonate-transporting ATPase COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: dhd:Dhaf_2148 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Phosphonate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related%3B~PFAM: ABC transporter gene gene1216 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1191 Sgly_1192 Sgly_1192 Sgly_1192 1187796 1188728 - histidine kinase COGs: COG0642 Signal transduction histidine kinase~InterPro IPR003661: IPR003594~KEGG: dhd:Dhaf_2147 histidine kinase~PFAM: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain~SMART: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain~SPTR: Histidine kinase%3B~PFAM: Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain gene gene1217 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1192 Sgly_1193 Sgly_1193 Sgly_1193 1188728 1189411 - two component transcriptional regulator%2C winged helix family COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR001789: IPR001867~KEGG: dhd:Dhaf_2146 two component transcriptional regulator%2C winged helix family~PFAM: Signal transduction response regulator%2C receiver domain%3B Signal transduction response regulator%2C C-terminal~SMART: Signal transduction response regulator%2C receiver domain~SPTR: Putative uncharacterized protein%3B~manually curated~PFAM: Response regulator receiver domain%3B Transcriptional regulatory protein%2C C terminal gene gene1218 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1193 Sgly_1194 Sgly_1194 Sgly_1194 1189938 1191395 + hypothetical protein KEGG: cyt:cce_1597 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Reverse transcriptase (RNA-dependent DNA polymerase) gene gene1219 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1194 Sgly_1195 Sgly_1195 Sgly_1195 1191492 1191860 + hypothetical protein KEGG: cbr:CBG18704 Hypothetical protein CBG18704~SPTR: Putative uncharacterized protein gene gene1220 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1195 Sgly_1196 Sgly_1196 Sgly_1196 1192124 1192387 + transcriptional regulator%2C AbrB family InterPro IPR006339: IPR007159~KEGG: ttm:Tthe_0179 transcriptional regulator%2C AbrB family~PFAM: Transcription regulator AbrB/SpoV%2C predicted~SPTR: Transcriptional regulator%2C AbrB family%3B~TIGRFAM: Transcription regulator AbrB~PFAM: SpoVT / AbrB like domain~TIGRFAM: looped-hinge helix DNA binding domain%2C AbrB family gene gene1221 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1196 Sgly_1197 Sgly_1197 Sgly_1197 1192371 1192811 + protein of unknown function DUF132 InterPro IPR002850: IPR006596~KEGG: ttm:Tthe_0828 PilT protein domain protein~SMART: Nucleotide binding protein%2C PINc~SPTR: PilT protein domain protein%3B~TIGRFAM: Protein of unknown function DUF132~TIGRFAM: probable toxin-antitoxin system toxin component%2C PIN family gene gene1222 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1197 Sgly_1198 Sgly_1198 Sgly_1198 1193295 1194512 + sodium/proton antiporter%2C NhaA family COGs: COG3004 Na+/H+ antiporter~HAMAP: Na+/H+ antiporter NhaA~InterPro IPR004670~KEGG: dhd:Dhaf_3397 Na+/H+ antiporter NhaA~PFAM: Na+/H+ antiporter NhaA~SPTR: Na(+)/H(+) antiporter nhaA%3B~PFAM: Na+/H+ antiporter 1%3B (TC 2.A.33.1.1 gene gene1223 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1198 Sgly_1199 Sgly_1199 Sgly_1199 1194533 1195789 - MscS Mechanosensitive ion channel COGs: COG0668 Small-conductance mechanosensitive channel~InterPro IPR006685~KEGG: aoe:Clos_0935 MscS mechanosensitive ion channel~PFAM: Mechanosensitive ion channel MscS~SPTR: MscS Mechanosensitive ion channel%3B~PFAM: Mechanosensitive ion channel gene gene1224 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1199 Sgly_1200 Sgly_1200 Sgly_1200 1195782 1197980 - HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 COGs: COG0637 phosphatase/phosphohexomutase~InterPro IPR006402: IPR006439: IPR005834: IPR013118~KEGG: ckr:CKR_1932 hypothetical protein~PFAM: Haloacid dehalogenase-like hydrolase%3B Mannitol dehydrogenase%2C C-terminal~SPTR: Putative uncharacterized protein%3B~TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 3%3B HAD-superfamily hydrolase%2C subfamily IA%2C variant 1~PFAM: Mannitol dehydrogenase C-terminal domain%3B haloacid dehalogenase-like hydrolase~TIGRFAM: haloacid dehalogenase superfamily%2C subfamily IA%2C variant 3 with third motif having DD or ED%3B haloacid dehalogenase superfamily%2C subfamily IA%2C variant 1 with third motif having Dx(3-4)D or Dx(3-4)E gene gene1225 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1200 Sgly_1201 Sgly_1201 Sgly_1201 1198555 1199583 + hypothetical protein KEGG: gwc:GWCH70_3091 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1226 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1201 Sgly_1202 Sgly_1202 Sgly_1202 1199795 1202878 - MmpL domain-containing protein COGs: COG2409 drug exporter of the RND superfamily~KEGG: ccb:Clocel_3611 MmpL domain-containing protein~SPTR: MMPL domain protein%3B~PFAM: MMPL family~TIGRFAM: X-X-X-Leu-X-X-Gly heptad repeats gene gene1227 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1202 Sgly_1203 Sgly_1203 Sgly_1203 1203062 1203688 + transcriptional regulator%2C TetR family KEGG: cce:Ccel_2357 transcriptional regulator%2C TetR family~SPTR: Transcriptional regulator%2C TetR family gene gene1228 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1203 Sgly_1204 Sgly_1204 Sgly_1204 1203973 1204380 - response regulator receiver InterPro IPR001789~KEGG: dhd:Dhaf_0512 response regulator receiver and SARP domain protein~PFAM: Signal transduction response regulator%2C receiver domain~SMART: Signal transduction response regulator%2C receiver domain~SPTR: Putative uncharacterized protein%3B~PFAM: Response regulator receiver domain gene gene1229 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1204 Sgly_1205 Sgly_1205 Sgly_1205 1204531 1204860 + helix-turn-helix domain protein InterPro IPR001387~KEGG: ere:EUBREC_2448 hypothetical protein~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3~SPTR: Putative uncharacterized protein%3B~PFAM: Helix-turn-helix gene gene1230 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1205 Sgly_1206 Sgly_1206 Sgly_1206 1204930 1207053 + 2%2C4-dienoyl-CoA reductase (NADPH) COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family~InterPro IPR001155: IPR013027~KEGG: tte:TTE2131 NADH:flavin oxidoreductase~PFAM: NADH:flavin oxidoreductase/NADH oxidase%2C N-terminal%3B FAD-dependent pyridine nucleotide-disulphide oxidoreductase~PRIAM: 2%2C4-dienoyl-CoA reductase (NADPH)~SPTR: NADH:flavin oxidoreductase%3B~PFAM: Pyridine nucleotide-disulphide oxidoreductase%3B NADH:flavin oxidoreductase / NADH oxidase family gene gene1231 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1206 Sgly_1207 Sgly_1207 Sgly_1207 1207201 1208688 - ABC transporter related protein COGs: COG1122 ABC-type cobalt transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: dhd:Dhaf_4772 ABC transporter related~PFAM: ABC transporter-like~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related protein%3B~PFAM: ABC transporter gene gene1232 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1207 Sgly_1208 Sgly_1208 Sgly_1208 1208699 1209437 - pseudogene gene1233 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1208 Sgly_1209 Sgly_1209 Sgly_1209 1209437 1210039 - Conserved hypothetical CHP02185%2C integral membrane protein InterPro IPR011733~KEGG: tde:TDE2624 hypothetical protein~PFAM: Conserved hypothetical CHP02185%2C integral membrane~SPTR: Conserved hypothetical integral membrane protein TIGR02185%3B~TIGRFAM: Conserved hypothetical CHP02185%2C integral membrane~PFAM: Hypothetical bacterial integral membrane protein (Trep_Strep)~TIGRFAM: conserved hypothetical integral membrane protein TIGR02185 gene gene1234 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1209 Sgly_1210 Sgly_1210 Sgly_1210 1210130 1210744 - regulatory protein TetR InterPro IPR001647~KEGG: dsy:DSY4740 hypothetical protein~PFAM: Transcription regulator%2C TetR-like%2C DNA-binding%2C bacterial/archaeal~SPTR: Putative uncharacterized protein%3B~manually curated~PFAM: Bacterial regulatory proteins%2C tetR family gene gene1235 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1210 Sgly_1211 Sgly_1211 Sgly_1211 1211015 1212016 + transcriptional regulator%2C AraC family COGs: COG2207 AraC-type DNA-binding domain-containing protein~InterPro IPR018060: IPR000005~KEGG: cbi:CLJ_B1642 AraC family regulatory protein~PFAM: Helix-turn-helix%2C AraC type~SMART: Helix-turn-helix%2C AraC domain~SPTR: AraC family regulatory protein%3B~PFAM: helix-turn-helix%2C Psq domain%3B Bacterial regulatory helix-turn-helix proteins%2C AraC family gene gene1236 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1211 Sgly_1212 Sgly_1212 Sgly_1212 1212000 1212224 + FeoA family protein InterPro IPR007167~KEGG: fma:FMG_0977 hypothetical protein~PFAM: Ferrous iron transporter%2C FeoA subunit~SPTR: Putative uncharacterized protein%3B~PFAM: FeoA domain gene gene1237 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1212 Sgly_1213 Sgly_1213 Sgly_1213 1212226 1214259 + small GTP-binding protein COGs: COG0370 Fe2+ transport system protein B~InterPro IPR005225: IPR002917: IPR011619: IPR011642: IPR 011640~KEGG: ckr:CKR_1889 hypothetical protein~PFAM: GTP-binding protein%2C HSR1-related%3B Ferrous iron transport protein B%2C N-terminal%3B Nucleoside recognition%3B Ferrous iron transport protein B%2C C-terminal~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Small GTP-binding protein~PFAM: Ferrous iron transport protein B%3B Ferrous iron transport protein B C terminus%3B Nucleoside recognition~TIGRFAM: ferrous iron transporter FeoB%3B small GTP-binding protein domain gene gene1238 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1213 Sgly_1214 Sgly_1214 Sgly_1214 1214272 1214547 + hypothetical protein KEGG: alv:Alvin_1524 protein of unknown function DUF1920~SPTR: Putative uncharacterized protein%3B~PFAM: FeoC like transcriptional regulator gene gene1239 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1214 Sgly_1215 Sgly_1215 Sgly_1215 1214592 1214915 - hypothetical protein KEGG: cpy:Cphy_1606 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1240 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1215 Sgly_1216 Sgly_1216 Sgly_1216 1214917 1215216 - Protein of unknown function DUF2089 InterPro IPR018658~KEGG: cpy:Cphy_1605 hypothetical protein~PFAM: Protein of unknown function DUF2089~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function(DUF2089) gene gene1241 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1216 Sgly_1217 Sgly_1217 Sgly_1217 1215845 1216027 + transcriptional regulator%2C AraC family KEGG: dae:Dtox_0423 transcriptional regulator%2C AraC family~SPTR: Transcriptional regulator%2C AraC family gene gene1242 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1217 Sgly_1218 Sgly_1218 Sgly_1218 1216032 1217624 + transcriptional regulator%2C AraC family COGs: COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain~InterPro IPR018060: IPR000005~KEGG: dae:Dtox_0423 transcriptional regulator%2C AraC family~PFAM: Helix-turn-helix%2C AraC type~SMART: Helix-turn-helix%2C AraC domain~SPTR: Transcriptional regulator%2C AraC family%3B~PFAM: Bacterial regulatory helix-turn-helix proteins%2C AraC family gene gene1243 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1218 Sgly_1219 Sgly_1219 Sgly_1219 1217760 1218263 + hypothetical protein KEGG: tad:TRIADDRAFT_52081 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1244 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1219 Sgly_1220 Sgly_1220 Sgly_1220 1218684 1219121 + hypothetical protein KEGG: sun:SUN_0956 hypothetical protein~SPTR: Ribose ABC transporter%2C periplasmic ribose-binding protein gene gene1245 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1220 Sgly_1221 Sgly_1221 Sgly_1221 1219154 1225426 + Fibronectin type III domain protein COGs: COG5263 FOG: Glucan-binding domain (YG repeat)~InterPro IPR003961: IPR013378: IPR001119: IPR002479~KEGG: dhd:Dhaf_2434 cell wall/surface repeat protein~PFAM: Fibronectin%2C type III%3B Listeria/Bacterioides repeat%3B S-layer homology domain%3B Putative cell wall binding repeat~SPTR: Fibronectin type III domain protein%3B~PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt)%3B S-layer homology domain%3B Fibronectin type III domain gene gene1246 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1221 Sgly_1222 Sgly_1222 Sgly_1222 1226348 1226509 - pseudogene gene1247 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1222 Sgly_1223 Sgly_1223 Sgly_1223 1226568 1227059 - isochorismatase hydrolase COGs: COG1335 Amidase related to nicotinamidase~InterPro IPR000868~KEGG: esi:Exig_1132 isochorismatase hydrolase~PFAM: Isochorismatase-like~SPTR: Isochorismatase family protein%3B~PFAM: Isochorismatase family gene gene1248 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1223 Sgly_1224 Sgly_1224 Sgly_1224 1227180 1228112 + hypothetical protein COGs: COG2378 transcriptional regulator protein~KEGG: lin:lin0464 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: HTH domain gene gene1249 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1224 Sgly_1225 Sgly_1225 Sgly_1225 1228478 1229320 + hypothetical protein KEGG: dhd:Dhaf_2218 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF3102) gene gene1250 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1225 Sgly_1226 Sgly_1226 Sgly_1226 1229412 1229639 + protein of unknown function DUF1659 InterPro IPR012454~KEGG: dhd:Dhaf_2355 protein of unknown function DUF1659~PFAM: Protein of unknown function DUF1659~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1659) gene gene1251 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1226 Sgly_1227 Sgly_1227 Sgly_1227 1229677 1229916 + hypothetical protein KEGG: dhd:Dhaf_3927 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF2922) gene gene1252 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1227 Sgly_1228 Sgly_1228 Sgly_1228 1230220 1232538 - protein of unknown function DUF214 COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component~InterPro IPR003838~KEGG: cdl:CDR20291_0863 hypothetical protein~PFAM: Protein of unknown function DUF214%2C permase predicted~SPTR: Putative uncharacterized protein%3B~PFAM: Predicted permease gene gene1253 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1228 Sgly_1229 Sgly_1229 Sgly_1229 1232535 1233218 - Phosphonate-transporting ATPase COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: ckr:CKR_3132 hypothetical protein~PFAM: ABC transporter-like~PRIAM: Phosphonate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related protein%3B~PFAM: ABC transporter gene gene1254 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1229 Sgly_1230 Sgly_1230 Sgly_1230 1233264 1234316 - integral membrane sensor signal transduction histidine kinase COGs: COG0642 Signal transduction histidine kinase~InterPro IPR003661: IPR003594~KEGG: ckr:CKR_3133 hypothetical protein~PFAM: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain~SMART: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain~SPTR: Integral membrane sensor signal transduction histidine kinase%3B~PFAM: Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain gene gene1255 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1230 Sgly_1231 Sgly_1231 Sgly_1231 1234326 1235012 - two component transcriptional regulator%2C winged helix family COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR001789: IPR001867~KEGG: cbb:CLD_0058 DNA-binding response regulator~PFAM: Signal transduction response regulator%2C receiver domain%3B Signal transduction response regulator%2C C-terminal~SMART: Signal transduction response regulator%2C receiver domain~SPTR: Two component transcriptional regulator%2C winged helix family%3B~PFAM: Response regulator receiver domain%3B Transcriptional regulatory protein%2C C terminal gene gene1256 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1231 Sgly_1232 Sgly_1232 Sgly_1232 1235460 1237292 - Xenobiotic-transporting ATPase COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterPro IPR003593: IPR001140: IPR003439~KEGG: ckr:CKR_0730 hypothetical protein~PFAM: ABC transporter-like%3B ABC transporter%2C transmembrane domain~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ABC transporter transmembrane region%3B ABC transporter gene gene1257 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1232 Sgly_1233 Sgly_1233 Sgly_1233 1237289 1239100 - Xenobiotic-transporting ATPase COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterPro IPR003593: IPR001140: IPR003439~KEGG: ckr:CKR_0729 hypothetical protein~PFAM: ABC transporter-like%3B ABC transporter%2C transmembrane domain~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ABC transporter transmembrane region%3B ABC transporter gene gene1258 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1233 Sgly_1234 Sgly_1234 Sgly_1234 1239170 1239763 - regulatory protein TetR InterPro IPR001647~KEGG: ckr:CKR_0728 hypothetical protein~PFAM: Transcription regulator%2C TetR-like%2C DNA-binding%2C bacterial/archaeal~SPTR: Putative uncharacterized protein%3B~PFAM: Bacterial regulatory proteins%2C tetR family gene gene1259 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1234 Sgly_1235 Sgly_1235 Sgly_1235 1240143 1240844 + regulatory protein TetR InterPro IPR001647~KEGG: bmq:BMQ_3255 transcriptional regulator%2C TetR family~PFAM: Transcription regulator%2C TetR-like%2C DNA-binding%2C bacterial/archaeal~SPTR: Transcriptional regulator%2C TetR family%3B~PFAM: Bacterial regulatory proteins%2C tetR family gene gene1260 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1235 Sgly_1236 Sgly_1236 Sgly_1236 1240831 1241568 + ABC transporter related protein COGs: COG1131 ABC-type multidrug transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: ere:EUBREC_3044 YcbN~PFAM: ABC transporter-like~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ABC transporter gene gene1261 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1236 Sgly_1237 Sgly_1237 Sgly_1237 1241561 1242271 + hypothetical protein KEGG: ere:EUBREC_3043 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1262 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1237 Sgly_1238 Sgly_1238 Sgly_1238 1242268 1242483 + hypothetical protein KEGG: cby:CLM_1402 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1263 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1238 Sgly_1239 Sgly_1239 Sgly_1239 1242736 1242885 + hypothetical protein SPTR: Putative uncharacterized protein gene gene1264 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1239 Sgly_1240 Sgly_1240 Sgly_1240 1243145 1243720 + hypothetical protein KEGG: edi:EDI_213640 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1265 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1240 Sgly_1241 Sgly_1241 Sgly_1241 1243933 1244829 + hypothetical protein KEGG: ccb:Clocel_4234 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Xylose isomerase-like TIM barrel gene gene1266 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1241 Sgly_1242 Sgly_1242 Sgly_1242 1245493 1246659 + hypothetical protein KEGG: hmo:HM1_1572 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1267 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1242 Sgly_1243 Sgly_1243 Sgly_1243 1246708 1247167 + pseudogene gene1268 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1243 Sgly_1244 Sgly_1244 Sgly_1244 1247157 1247312 - pseudogene gene1269 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1244 Sgly_1245 Sgly_1245 Sgly_1245 1247765 1250317 - protein of unknown function DUF214 COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component~InterPro IPR003838~KEGG: cby:CLM_0623 efflux ABC transporter%2C permease protein~PFAM: Protein of unknown function DUF214%2C permase predicted~SPTR: Putative uncharacterized protein%3B~PFAM: Predicted permease gene gene1270 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1245 Sgly_1246 Sgly_1246 Sgly_1246 1250322 1250999 - Sulfate-transporting ATPase COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: cce:Ccel_0557 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Sulfate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related%3B~PFAM: ABC transporter gene gene1271 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1246 Sgly_1247 Sgly_1247 Sgly_1247 1251071 1251988 - histidine kinase COGs: COG0642 Signal transduction histidine kinase~InterPro IPR003661: IPR003594~KEGG: cdf:CD1956 two-component sensor histidine kinase~PFAM: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain~SMART: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain~SPTR: Two-component sensor histidine kinase%3B~PFAM: Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain gene gene1272 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1247 Sgly_1248 Sgly_1248 Sgly_1248 1251991 1252674 - two component transcriptional regulator%2C winged helix family COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR001789: IPR001867~KEGG: cdf:CD1957 two-component response regulator~PFAM: Signal transduction response regulator%2C receiver domain%3B Signal transduction response regulator%2C C-terminal~SMART: Signal transduction response regulator%2C receiver domain~SPTR: Putative uncharacterized protein%3B~PFAM: Response regulator receiver domain%3B Transcriptional regulatory protein%2C C terminal gene gene1273 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1248 Sgly_1249 Sgly_1249 Sgly_1249 1252671 1252865 - transposase KEGG: ckl:CKL_3855 transposase~SPTR: Predicted transposase gene gene1274 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1249 Sgly_1250 Sgly_1250 Sgly_1250 1253373 1254008 - regulatory protein TetR InterPro IPR001647~KEGG: dhd:Dhaf_2118 transcriptional regulator%2C TetR family~PFAM: Transcription regulator%2C TetR-like%2C DNA-binding%2C bacterial/archaeal~SPTR: Transcriptional regulator%2C TetR family%3B~PFAM: Bacterial regulatory proteins%2C tetR family gene gene1275 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1250 Sgly_1251 Sgly_1251 Sgly_1251 1254174 1254926 + Polyamine-transporting ATPase COGs: COG1131 ABC-type multidrug transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: dhd:Dhaf_2117 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Polyamine-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related%3B~PFAM: ABC transporter gene gene1276 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1251 Sgly_1252 Sgly_1252 Sgly_1252 1254913 1255932 + ABC-2 type transporter InterPro IPR013525~KEGG: dhd:Dhaf_2116 ABC-2 type transporter~PFAM: ABC-2 type transporter~SPTR: ABC-2 type transporter%3B~PFAM: ABC-2 type transporter~TIGRFAM: ABC transporter efflux protein%2C DrrB family gene gene1277 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1252 Sgly_1253 Sgly_1253 Sgly_1253 1255956 1256948 + secretion protein HlyD family protein COGs: COG1566 Multidrug resistance efflux pump~InterPro IPR006143~KEGG: dhd:Dhaf_2115 secretion protein HlyD family protein~PFAM: Secretion protein HlyD~SPTR: Secretion protein HlyD family protein%3B~PFAM: HlyD family secretion protein gene gene1278 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1253 Sgly_1254 Sgly_1254 Sgly_1254 1257050 1257517 - transcriptional regulator%2C BadM/Rrf2 family COGs: COG1959 transcriptional regulator protein~InterPro IPR000944~KEGG: ccv:CCV52592_1447 RRF2 family protein~PFAM: Transcription regulator Rrf2~SPTR: RRF2 family protein%3B~PFAM: Transcriptional regulator gene gene1279 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1254 Sgly_1255 Sgly_1255 Sgly_1255 1257664 1258248 + NAD(P)H dehydrogenase (quinone) COGs: COG2249 Putative NADPH-quinone reductase (modulator of drug activity B)~InterPro IPR003680~KEGG: sga:GALLO_0139 putative NADPH-quinone reductase~PFAM: Flavodoxin-like fold~SPTR: Putative NADPH-quinone reductase%3B~PFAM: Flavodoxin-like fold gene gene1280 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1255 Sgly_1256 Sgly_1256 Sgly_1256 1258311 1259126 + 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein KEGG: cbe:Cbei_2720 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein~SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein gene gene1281 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1256 Sgly_1257 Sgly_1257 Sgly_1257 1259514 1259699 + hypothetical protein KEGG: dhd:Dhaf_0507 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1282 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1257 Sgly_1258 Sgly_1258 Sgly_1258 1259800 1260975 + nuclease SbcCD%2C D subunit COGs: COG0420 DNA repair exonuclease~InterPro IPR004593: IPR004843~KEGG: cpy:Cphy_1245 nuclease SbcCD%2C D subunit~PFAM: Metallophosphoesterase~SPTR: Nuclease SbcCD%2C D subunit%3B~TIGRFAM: Exonuclease SbcD~PFAM: Calcineurin-like phosphoesterase%3B Type 5 capsule protein repressor C terminal~TIGRFAM: exonuclease SbcD gene gene1283 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1258 Sgly_1259 Sgly_1259 Sgly_1259 1260972 1264139 + SMC domain-containing protein COGs: COG0419 ATPase involved in DNA repair~KEGG: cpy:Cphy_1246 SMC domain-containing protein~SPTR: SMC domain protein%3B~TIGRFAM: exonuclease SbcC gene gene1284 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1259 Sgly_1260 Sgly_1260 Sgly_1260 1264186 1266048 - heavy metal translocating P-type ATPase COGs: COG2217 Cation transport ATPase~InterPro IPR006404: IPR006416: IPR001757: IPR008250: IPR 005834~KEGG: dae:Dtox_2543 heavy metal translocating P-type ATPase~PFAM: ATPase%2C P-type%2C ATPase-associated domain%3B Haloacid dehalogenase-like hydrolase~PRIAM: Copper-exporting ATPase~SPTR: Heavy metal translocating P-type ATPase%3B~TIGRFAM: ATPase%2C P-type%2C heavy metal translocating%3B ATPase%2C P-type%2C heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating%3B ATPase%2C P-type%2C K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter~PFAM: E1-E2 ATPase%3B haloacid dehalogenase-like hydrolase~TIGRFAM: heavy metal translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC%3B heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase gene gene1285 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1260 Sgly_1261 Sgly_1261 Sgly_1261 1266069 1266359 - protein of unknown function DUF156 COGs: COG1937 conserved hypothetical protein~InterPro IPR003735~KEGG: clj:CLJU_c32140 hypothetical protein~PFAM: Protein of unknown function DUF156~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterised BCR%2C COG1937 gene gene1286 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1261 Sgly_1262 Sgly_1262 Sgly_1262 1266535 1266807 - hypothetical protein KEGG: clj:CLJU_c13990 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: FeoC like transcriptional regulator gene gene1287 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1262 Sgly_1263 Sgly_1263 Sgly_1263 1266821 1268878 - small GTP-binding protein COGs: COG0370 Fe2+ transport system protein B~InterPro IPR005225: IPR002917: IPR011640: IPR011642~KEGG: ckr:CKR_1889 hypothetical protein~PFAM: GTP-binding protein%2C HSR1-related%3B Ferrous iron transport protein B%2C C-terminal%3B Nucleoside recognition~SPTR: Fe2+ transport system protein B%3B~TIGRFAM: Small GTP-binding protein~PFAM: Ferrous iron transport protein B%3B Ferrous iron transport protein B C terminus%3B Nucleoside recognition~TIGRFAM: ferrous iron transporter FeoB%3B small GTP-binding protein domain gene gene1288 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1263 Sgly_1264 Sgly_1264 Sgly_1264 1268878 1269105 - FeoA family protein InterPro IPR007167~KEGG: bpb:bpr_III198 ferrous iron transport protein A FeoA2~PFAM: Ferrous iron transporter%2C FeoA subunit~SPTR: Conserved domain protein%3B~PFAM: FeoA domain gene gene1289 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1264 Sgly_1265 Sgly_1265 Sgly_1265 1270070 1270522 - regulatory protein MarR InterPro IPR000835~KEGG: ssm:Spirs_3509 transcriptional regulator%2C MarR family~PFAM: HTH transcriptional regulator%2C MarR~SMART: HTH transcriptional regulator%2C MarR~SPTR: Transcriptional regulator%2C MarR family%3B~PFAM: MarR family gene gene1290 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1265 Sgly_1266 Sgly_1266 Sgly_1266 1271085 1272152 + hypothetical protein KEGG: pct:PC1_3262 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1292 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1266 Sgly_1267 Sgly_1267 Sgly_1267 1272149 1273063 + CRISPR-associated protein TM1795 family protein InterPro IPR007522~KEGG: ttm:Tthe_0936 CRISPR-associated RAMP protein%2C Cmr1 family~SPTR: CRISPR-associated RAMP protein%2C Cmr1 family%3B~TIGRFAM: CRISPR-associated protein TM1795 family%2C N-terminal~TIGRFAM: CRISPR-associated RAMP protein%2C Cmr1 family gene gene1293 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1267 Sgly_1268 Sgly_1268 Sgly_1268 1273060 1274772 + CRISPR-associated protein%2C Crm2 family COGs: COG1353 hydrolase of the HD superfamily (permuted catalytic motifs)~InterPro IPR013407~KEGG: cts:Ctha_0947 CRISPR-associated protein%2C Crm2 family~SPTR: CRISPR-associated protein%2C Crm2 family%3B~TIGRFAM: CRISPR-associated protein Crm2~PFAM: CRISPR-associated protein~TIGRFAM: CRISPR-associated protein%2C Crm2 family gene gene1294 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1268 Sgly_1269 Sgly_1269 Sgly_1269 1274748 1275902 + CRISPR-associated protein%2C Cmr3 COGs: COG1769 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)~InterPro IPR019117~KEGG: ttm:Tthe_0938 CRISPR-associated protein%2C Cmr3 family~PFAM: CRISPR-associated protein%2C Cmr3~SPTR: CRISPR-associated protein%2C Cmr3 family%3B~PFAM: CRISPR-associated protein (Cas_Cmr3)~TIGRFAM: CRISPR-associated protein%2C Cmr3 family gene gene1295 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1269 Sgly_1270 Sgly_1270 Sgly_1270 1275890 1276837 + CRISPR-associated RAMP protein%2C Cmr4 family COGs: COG1336 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)~InterPro IPR005537: IPR013410~KEGG: cts:Ctha_0944 CRISPR-associated RAMP protein%2C Cmr4 family~PFAM: Protein of unknown function DUF324~SPTR: CRISPR-associated RAMP protein%2C Cmr4 family%3B~TIGRFAM: CRISPR-associated RAMP Cmr4~PFAM: RAMP superfamily~TIGRFAM: CRISPR-associated RAMP protein%2C Cmr4 family gene gene1296 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1270 Sgly_1271 Sgly_1271 Sgly_1271 1276830 1277219 + CRISPR-associated protein%2C Cmr5 family COGs: COG3337 Uncharacterized protein predicted to be involved in DNA repair~InterPro IPR010160~KEGG: gyc:GYMC61_1197 CRISPR-associated protein%2C Cmr5 family~PFAM: CRISPR-associated protein%2C TM1791.1~SPTR: CRISPR-associated protein%2C Cmr5 family%3B~TIGRFAM: CRISPR-associated protein%2C TM1791.1~PFAM: CRISPR-associated protein (Cas_Cmr5)~TIGRFAM: CRISPR-associated protein%2C Cmr5 family gene gene1297 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1271 Sgly_1272 Sgly_1272 Sgly_1272 1277185 1278030 + CRISPR-associated RAMP protein%2C Cmr6 family COGs: COG1604 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)~InterPro IPR005537: IPR010172~KEGG: ttm:Tthe_0942 CRISPR-associated RAMP protein%2C Cmr6 family~PFAM: Protein of unknown function DUF324~SPTR: CRISPR-associated RAMP protein%2C Cmr6 family%3B~TIGRFAM: CRISPR-associated protein%2C TM1791~PFAM: RAMP superfamily~TIGRFAM: CRISPR-associated RAMP protein%2C Cmr6 family gene gene1298 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1272 Sgly_1273 Sgly_1273 Sgly_1273 1278130 1278351 + hypothetical protein KEGG: amt:Amet_3921 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1299 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1273 Sgly_1274 Sgly_1274 Sgly_1274 1278656 1278871 + prevent-host-death family protein InterPro IPR006442~KEGG: tjr:TherJR_0904 prevent-host-death family protein~SPTR: Prevent-host-death family protein%3B~TIGRFAM: Prevent-host-death protein~PFAM: Phd_YefM~TIGRFAM: prevent-host-death family protein gene gene1300 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1274 Sgly_1275 Sgly_1275 Sgly_1275 1278868 1279280 + pseudogene gene1301 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1275 Sgly_1276 Sgly_1276 Sgly_1276 1279436 1279669 - pseudogene gene1302 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1276 Sgly_1277 Sgly_1277 Sgly_1277 1281083 1282138 + hypothetical protein KEGG: dsy:DSY2359 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1303 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1277 Sgly_1278 Sgly_1278 Sgly_1278 1282576 1282935 + transcriptional repressor%2C CopY family COGs: COG3682 transcriptional regulator protein~InterPro IPR005650~KEGG: hmo:HM1_2921 hypothetical protein~PFAM: Penicillinase repressor~SPTR: Putative uncharacterized protein%3B~PFAM: Penicillinase repressor gene gene1304 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1278 Sgly_1279 Sgly_1279 Sgly_1279 1282932 1284605 + peptidase M56 BlaR1 COGs: COG4219 Antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component~InterPro IPR008756~KEGG: ckr:CKR_3089 hypothetical protein~PFAM: Peptidase M56%2C BlaR1~SPTR: Putative uncharacterized protein%3B~PFAM: BlaR1 peptidase M56 gene gene1305 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1279 Sgly_1280 Sgly_1280 Sgly_1280 1284598 1284819 - hypothetical protein KEGG: cfa:484985 olfactory receptor~SPTR: Putative uncharacterized protein gene gene1306 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1280 Sgly_1281 Sgly_1281 Sgly_1281 1285535 1285804 + pseudogene gene1307 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1281 Sgly_1282 Sgly_1282 Sgly_1282 1286088 1286210 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily KEGG: dhd:Dhaf_3330 RNA polymerase%2C sigma-24 subunit%2C ECF subfamily~SPTR: RNA polymerase%2C sigma-24 subunit%2C ECF subfamily gene gene1308 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1282 Sgly_1283 Sgly_1283 Sgly_1283 1286403 1286954 + VanZ family protein InterPro IPR006976~KEGG: cbe:Cbei_3639 VanZ family protein~PFAM: VanZ-like~SPTR: VanZ family protein%3B~PFAM: VanZ like family gene gene1309 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1283 Sgly_1284 Sgly_1284 Sgly_1284 1287015 1287205 - pseudogene gene1310 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1284 Sgly_1285 Sgly_1285 Sgly_1285 1287246 1288499 - hypothetical protein KEGG: dhd:Dhaf_2665 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1311 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1285 Sgly_1286 Sgly_1286 Sgly_1286 1288496 1289386 - Fe(3+)-transporting ATPase COGs: COG1131 ABC-type multidrug transport system ATPase component~InterPro IPR003439: IPR003593~KEGG: dhd:Dhaf_2664 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Fe(3+)-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ABC transporter gene gene1312 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1286 Sgly_1287 Sgly_1287 Sgly_1287 1289409 1290197 - hypothetical protein KEGG: dhd:Dhaf_2663 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1313 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1287 Sgly_1288 Sgly_1288 Sgly_1288 1290198 1290713 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog~InterPro IPR007627: IPR013249: IPR014284~KEGG: dsy:DSY1530 hypothetical protein~PFAM: RNA polymerase sigma-70 region 2%3B RNA polymerase sigma factor 70%2C region 4 type 2~SPTR: Putative uncharacterized protein%3B~TIGRFAM: RNA polymerase sigma-70~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family gene gene1314 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1288 Sgly_1289 Sgly_1289 Sgly_1289 1291168 1291410 + hypothetical protein KEGG: afn:Acfer_1116 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Phd_YefM gene gene1315 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1289 Sgly_1290 Sgly_1290 Sgly_1290 1291407 1292093 + hypothetical protein KEGG: cbt:CLH_2528 putative lipoprotein~SPTR: Putative uncharacterized protein gene gene1316 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1290 Sgly_1291 Sgly_1291 Sgly_1291 1292212 1292571 + transcriptional regulator%2C HxlR family COGs: COG1733 transcriptional regulator protein~InterPro IPR002577~KEGG: clj:CLJU_c32250 putative transcriptional regulator~PFAM: Helix-turn-helix%2C HxlR type~SPTR: Putative uncharacterized protein%3B~PFAM: HxlR-like helix-turn-helix gene gene1317 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1291 Sgly_1292 Sgly_1292 Sgly_1292 1292662 1293084 + pyridoxamine 5'-phosphate oxidase-related FMN-binding protein COGs: COG3871 Uncharacterized stress protein (general stress protein 26)~InterPro IPR011576~KEGG: bth:BT_1384 hypothetical protein~PFAM: Pyridoxamine 5'-phosphate oxidase-like%2C FMN-binding domain~SPTR: Pyridoxamine 5'-phosphate oxidase-related FMN-binding%3B~PFAM: Pyridoxamine 5'-phosphate oxidase gene gene1318 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1292 Sgly_1293 Sgly_1293 Sgly_1293 1293534 1294094 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog~InterPro IPR007627: IPR013249: IPR014284~KEGG: bts:Btus_0293 RNA polymerase%2C sigma-24 subunit%2C ECF subfamily~PFAM: RNA polymerase sigma-70 region 2%3B RNA polymerase sigma factor 70%2C region 4 type 2~SPTR: RNA polymerase sigma C factor%3B~TIGRFAM: RNA polymerase sigma-70~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family gene gene1319 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1293 Sgly_1294 Sgly_1294 Sgly_1294 1294042 1295100 + hypothetical protein KEGG: cbh:CLC_0080 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1320 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1294 Sgly_1295 Sgly_1295 Sgly_1295 1295211 1295567 + hypothetical protein KEGG: dae:Dtox_0648 prevent-host-death family protein~SPTR: Prevent-host-death family protein gene gene1321 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1295 Sgly_1296 Sgly_1296 Sgly_1296 1295825 1296232 - hypothetical protein KEGG: dsy:DSY2157 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1322 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1296 Sgly_1297 Sgly_1297 Sgly_1297 1296326 1296535 - hypothetical protein KEGG: vvi:100249890 hypothetical protein LOC100249890 gene gene1323 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1297 Sgly_1298 Sgly_1298 Sgly_1298 1296618 1296806 - N-acetylglutamate synthase KEGG: saz:Sama_0330 N-acetylglutamate synthase gene gene1324 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1298 Sgly_1299 Sgly_1299 Sgly_1299 1297052 1297831 + transcriptional regulator%2C MerR family COGs: COG0789 transcriptional regulator protein~InterPro IPR000551~KEGG: bpb:bpr_III183 MerR family transcriptional regulator~PFAM: HTH transcriptional regulator%2C MerR~SMART: HTH transcriptional regulator%2C MerR~SPTR: Putative uncharacterized protein%3B~PFAM: MerR family regulatory protein gene gene1325 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1299 Sgly_1300 Sgly_1300 Sgly_1300 1297959 1298891 - hypothetical protein COGs: COG2378 transcriptional regulator protein~KEGG: lin:lin0464 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: HTH domain gene gene1326 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1300 Sgly_1301 Sgly_1301 Sgly_1301 1299001 1299267 + hypothetical protein KEGG: ecb:100070369 similar to kinesin family member 21A~SPTR: Acyl carrier protein phosphodiesterase gene gene1327 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1301 Sgly_1302 Sgly_1302 Sgly_1302 1299540 1300184 + hypothetical protein COGs: COG0426 flavoprotein~KEGG: sew:SeSA_B0086 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Metallo-beta-lactamase superfamily gene gene1328 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1302 Sgly_1303 Sgly_1303 Sgly_1303 1300305 1300543 - pseudogene gene1329 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1303 Sgly_1304 Sgly_1304 Sgly_1304 1300703 1301599 + helix-turn-helix type 11 domain protein COGs: COG2378 transcriptional regulator protein~KEGG: dhd:Dhaf_0764 helix-turn-helix type 11 domain protein~SPTR: Helix-turn-helix type 11 domain protein%3B~PFAM: HTH domain gene gene1330 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1304 Sgly_1305 Sgly_1305 Sgly_1305 1301672 1302112 + transcription activator effector binding protein COGs: COG3708 conserved hypothetical protein~InterPro IPR010499~KEGG: dhd:Dhaf_0763 transcription activator effector binding~PFAM: Bacterial transcription activator%2C effector binding~SPTR: Transcription activator effector binding%3B~PFAM: Bacterial transcription activator%2C effector binding domain gene gene1331 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1305 Sgly_1306 Sgly_1306 Sgly_1306 1302286 1302402 + hypothetical protein gene gene1332 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1306 Sgly_1307 Sgly_1307 Sgly_1307 1302610 1303575 - transcriptional regulator%2C AraC family COGs: COG2207 AraC-type DNA-binding domain-containing protein~InterPro IPR000005: IPR018060~KEGG: dae:Dtox_2680 transcriptional regulator%2C AraC family~PFAM: Helix-turn-helix%2C AraC type~SMART: Helix-turn-helix%2C AraC domain~SPTR: Transcriptional regulator%2C AraC family%3B~PFAM: Bacterial regulatory helix-turn-helix proteins%2C AraC family gene gene1333 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1307 Sgly_1308 Sgly_1308 Sgly_1308 1303710 1304291 + Conserved hypothetical CHP02185%2C integral membrane protein InterPro IPR011733~KEGG: clo:HMPREF0868_0145 conserved hypothetical protein TIGR02185~PFAM: Conserved hypothetical CHP02185%2C integral membrane~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Conserved hypothetical CHP02185%2C integral membrane~PFAM: Hypothetical bacterial integral membrane protein (Trep_Strep)~TIGRFAM: conserved hypothetical integral membrane protein TIGR02185 gene gene1334 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1308 Sgly_1309 Sgly_1309 Sgly_1309 1304288 1306501 + Monosaccharide-transporting ATPase COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase~InterPro IPR003439: IPR003339: IPR003593~KEGG: cbl:CLK_1526 ABC transporter%2C ATP-binding protein~PFAM: ABC transporter-like%3B Cobalt transport protein~PRIAM: Monosaccharide-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter%2C ATP-binding protein%3B~PFAM: ABC transporter%3B Cobalt transport protein gene gene1335 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1309 Sgly_1310 Sgly_1310 Sgly_1310 1306595 1306798 + pseudogene gene1336 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1310 Sgly_1311 Sgly_1311 Sgly_1311 1307082 1307316 - pseudogene gene1337 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1311 Sgly_1312 Sgly_1312 Sgly_1312 1307394 1307591 + transcriptional regulator%2C XRE family COGs: COG1476 transcriptional regulator protein~InterPro IPR001387~KEGG: cbb:CLD_0298 hypothetical protein~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3~SPTR: Putative uncharacterized protein%3B~PFAM: Helix-turn-helix gene gene1338 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1312 Sgly_1313 Sgly_1313 Sgly_1313 1307591 1308082 + hypothetical protein KEGG: llk:LLKF_0306 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1339 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1313 Sgly_1314 Sgly_1314 Sgly_1314 1308140 1309396 + Erythromycin esterase COGs: COG2312 Erythromycin esterase homolog~InterPro IPR007815~KEGG: bbe:BBR47_50440 hypothetical protein~PFAM: Erythromycin esterase~SPTR: Erythromycin esterase%3B~PFAM: Erythromycin esterase gene gene1340 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1314 Sgly_1315 Sgly_1315 Sgly_1315 1309516 1310703 - putative transcriptional regulator%2C GntR family COGs: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs~InterPro IPR004839~KEGG: ckr:CKR_0384 hypothetical protein~PFAM: Aminotransferase%2C class I/II~PRIAM: Aromatic-amino-acid transaminase~SPTR: Putative uncharacterized protein%3B~PFAM: Aminotransferase class I and II gene gene1341 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1315 Sgly_1316 Sgly_1316 Sgly_1316 1310944 1311528 + hypothetical protein KEGG: dsy:DSY0734 hypothetical protein~SPTR: Putative uncharacterized protein%3B~manually curated gene gene1342 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1316 Sgly_1317 Sgly_1317 Sgly_1317 1311746 1312384 - Nickel-transporting ATPase COGs: COG1124 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component~InterPro IPR003439: IPR003593~KEGG: dsy:DSY0385 hypothetical protein~PFAM: ABC transporter-like~PRIAM: Nickel-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ABC transporter gene gene1343 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1317 Sgly_1318 Sgly_1318 Sgly_1318 1312406 1313272 - binding-protein-dependent transport systems inner membrane component COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: dhd:Dhaf_0329 binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Binding-protein-dependent transport systems inner membrane component%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1344 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1318 Sgly_1319 Sgly_1319 Sgly_1319 1313265 1314248 - binding-protein-dependent transport systems inner membrane component COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: dsy:DSY0387 hypothetical protein~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Putative uncharacterized protein%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1345 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1319 Sgly_1320 Sgly_1320 Sgly_1320 1314333 1315931 - extracellular solute-binding protein family 5 COGs: COG0747 ABC-type dipeptide transport system periplasmic component~InterPro IPR000914~KEGG: dsy:DSY0388 hypothetical protein~PFAM: Bacterial extracellular solute-binding protein%2C family 5~SPTR: Putative uncharacterized protein%3B~PFAM: Bacterial extracellular solute-binding proteins%2C family 5 Middle gene gene1346 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1320 Sgly_1321 Sgly_1321 Sgly_1321 1316058 1316246 + hypothetical protein gene gene1347 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1321 Sgly_1322 Sgly_1322 Sgly_1322 1316295 1317434 + hypothetical protein COGs: COG1192 ATPase involved in chromosome partitioning~KEGG: aap:NT05HA_0673 putative lysogenic conversion protein~SPTR: Putative uncharacterized protein%3B~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain gene gene1348 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1322 Sgly_1323 Sgly_1323 Sgly_1323 1317589 1318044 + hypothetical protein KEGG: gym:GYMC10_4446 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1349 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1323 Sgly_1324 Sgly_1324 Sgly_1324 1318510 1319205 + Methyltransferase type 11 COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis~InterPro IPR013216~KEGG: mau:Micau_4361 methyltransferase~PFAM: Methyltransferase type 11~SPTR: Methyltransferase type 11%3B~PFAM: Methyltransferase domain gene gene1350 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1324 Sgly_1325 Sgly_1325 Sgly_1325 1319208 1320011 + hydroxyethylthiazole kinase COGs: COG2145 Hydroxyethylthiazole kinase sugar kinase family~HAMAP: Hydroxyethylthiazole kinase~InterPro IPR000417~KEGG: lil:LA_3365 hydroxyethylthiazole kinase~PFAM: Hydroxyethylthiazole kinase~PRIAM: Hydroxyethylthiazole kinase~SPTR: Hydroxyethylthiazole kinase%3B~TIGRFAM: hydroxyethylthiazole kinase~PFAM: Hydroxyethylthiazole kinase family~TIGRFAM: hydroxyethylthiazole kinase gene gene1351 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1325 Sgly_1326 Sgly_1326 Sgly_1326 1320043 1320216 + protein of unknown function DUF343 InterPro IPR005651~KEGG: rer:RER_32750 hypothetical protein~PFAM: Protein of unknown function DUF343~SPTR: Putative uncharacterized protein%3B~PFAM: Trm112p-like protein gene gene1352 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1326 Sgly_1327 Sgly_1327 Sgly_1327 1320250 1320867 + flavin reductase domain protein FMN-binding protein COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family~InterPro IPR002563~KEGG: bpb:bpr_I0780 flavin reductase domain-containing protein~PFAM: Flavin reductase-like%2C FMN-binding~SPTR: Flavoredoxin%3B~PFAM: Flavin reductase like domain gene gene1353 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1327 Sgly_1328 Sgly_1328 Sgly_1328 1321004 1321282 + pseudogene gene1354 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1328 Sgly_1329 Sgly_1329 Sgly_1329 1321348 1322181 + Polyamine-transporting ATPase COGs: COG1122 ABC-type cobalt transport system ATPase component~InterPro IPR003439: IPR003593~KEGG: cno:NT01CX_1146 cobalt transporter ATP-binding subunit~PFAM: ABC transporter-like~PRIAM: Polyamine-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Cobalt import ATP-binding protein CbiO 1%3B~PFAM: ABC transporter%3B Cobalt ATP-binding cassette C terminal gene gene1355 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1329 Sgly_1330 Sgly_1330 Sgly_1330 1322172 1323026 + Sulfate-transporting ATPase COGs: COG1122 ABC-type cobalt transport system ATPase component~InterPro IPR003439: IPR003593~KEGG: amt:Amet_4446 cobalt transporter ATP-binding subunit~PFAM: ABC transporter-like~PRIAM: Sulfate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related%3B~PFAM: ABC transporter%3B Cobalt ATP-binding cassette C terminal gene gene1356 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1330 Sgly_1331 Sgly_1331 Sgly_1331 1323028 1323834 + cobalt transport protein COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter~InterPro IPR003339~KEGG: ctc:CTC02574 cobalt transport protein CbiQ~PFAM: Cobalt transport protein~SPTR: Cobalt transport protein cbiQ%3B~PFAM: Cobalt transport protein gene gene1357 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1331 Sgly_1332 Sgly_1332 Sgly_1332 1324513 1325088 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog~InterPro IPR007627: IPR013249: IPR014284~KEGG: dhd:Dhaf_2113 RNA polymerase factor sigma-70~PFAM: RNA polymerase sigma-70 region 2%3B RNA polymerase sigma factor 70%2C region 4 type 2~SPTR: RNA polymerase%2C sigma-24 subunit%2C ECF subfamily%3B~TIGRFAM: RNA polymerase sigma-70~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family gene gene1358 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1332 Sgly_1333 Sgly_1333 Sgly_1333 1325091 1326290 + hypothetical protein KEGG: dhd:Dhaf_2114 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1359 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1333 Sgly_1334 Sgly_1334 Sgly_1334 1326516 1326631 + pseudogene gene1360 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1334 Sgly_1335 Sgly_1335 Sgly_1335 1326775 1327806 + helix-turn-helix domain protein InterPro IPR001387~KEGG: ctc:CTC00641 transcriptional regulatory protein~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3~SPTR: Transcriptional regulator%3B~PFAM: Helix-turn-helix gene gene1361 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1335 Sgly_1336 Sgly_1336 Sgly_1336 1327890 1328375 + hypothetical protein KEGG: sub:SUB0278 hypothetical protein~SPTR: Predicted protein gene gene1362 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1336 Sgly_1337 Sgly_1337 Sgly_1337 1328970 1329872 + Sirohydrochlorin cobaltochelatase COGs: COG4822 Cobalamin biosynthesis protein CbiK Co2+ chelatase~InterPro IPR010388~KEGG: mru:mru_0895 cobalt chelatase CbiK~PFAM: Anaerobic cobalt chelatase~PRIAM: Sirohydrochlorin cobaltochelatase~SPTR: Putative uncharacterized protein%3B~PFAM: Cobalt chelatase (CbiK) gene gene1363 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1337 Sgly_1338 Sgly_1338 Sgly_1338 1329978 1330499 + hypothetical protein KEGG: shi:Shel_24810 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1364 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1338 Sgly_1339 Sgly_1339 Sgly_1339 1330571 1331080 + hypothetical protein KEGG: ere:EUBREC_1930 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1365 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1339 Sgly_1340 Sgly_1340 Sgly_1340 1331083 1332255 + periplasmic binding protein COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component~InterPro IPR002491~KEGG: shi:Shel_24460 ABC-type Fe3+-hydroxamate transport system%2C periplasmic component~PFAM: Periplasmic binding protein~SPTR: Putative ferrichrome-binding periplasmic protein%3B~PFAM: Periplasmic binding protein gene gene1366 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1340 Sgly_1341 Sgly_1341 Sgly_1341 1332265 1333296 + transport system permease protein COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component~InterPro IPR000522~KEGG: ere:EUBREC_1928 iron compound ABC transporter%2C permease protein%2C putative~PFAM: Bacterial transport system permease protein~SPTR: Putative uncharacterized protein%3B~PFAM: FecCD transport family gene gene1367 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1341 Sgly_1342 Sgly_1342 Sgly_1342 1333298 1334410 + Iron-chelate-transporting ATPase COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components~InterPro IPR003439: IPR003593~KEGG: ere:EUBREC_1927 ferric enterobactin transport ATP-binding protein FepC~PFAM: ABC transporter-like~PRIAM: Iron-chelate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ABC transporter gene gene1368 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1342 Sgly_1343 Sgly_1343 Sgly_1343 1334958 1335938 + transcriptional regulator%2C AraC family COGs: COG2207 AraC-type DNA-binding domain-containing protein~InterPro IPR000005: IPR018060~KEGG: dhd:Dhaf_4771 transcriptional regulator%2C AraC family~PFAM: Helix-turn-helix%2C AraC type~SMART: Helix-turn-helix%2C AraC domain~SPTR: Transcriptional regulator%2C AraC family%3B~PFAM: Bacterial regulatory helix-turn-helix proteins%2C AraC family gene gene1369 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1343 Sgly_1344 Sgly_1344 Sgly_1344 1335945 1337735 + Xenobiotic-transporting ATPase COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterPro IPR001140: IPR003439: IPR003593~KEGG: cby:CLM_2586 putative ABC transporter%2C ATP-binding/permease protein~PFAM: ABC transporter-like%3B ABC transporter%2C transmembrane domain~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter%2C permease/ATP-binding protein%3B~PFAM: ABC transporter transmembrane region%3B ABC transporter gene gene1370 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1344 Sgly_1345 Sgly_1345 Sgly_1345 1337728 1339473 + Xenobiotic-transporting ATPase COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterPro IPR001140: IPR003439: IPR003593~KEGG: cby:CLM_2585 putative ABC transporter%2C ATP-binding/permease protein~PFAM: ABC transporter-like%3B ABC transporter%2C transmembrane domain~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter%2C permease/ATP-binding protein%3B~PFAM: ABC transporter%3B ABC transporter transmembrane region gene gene1371 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1345 Sgly_1346 Sgly_1346 Sgly_1346 1340157 1340432 + hypothetical protein KEGG: gau:GAU_3538 hypothetical protein~SPTR: Putative glucosyltransferase-T gene gene1372 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1346 Sgly_1347 Sgly_1347 Sgly_1347 1340601 1342748 + peptidase C11 clostripain InterPro IPR005077~KEGG: bpb:bpr_I2934 cysteine protease C11 family protein~PFAM: Peptidase C11%2C clostripain~SPTR: Peptidase C11 clostripain%3B~PFAM: Clostripain family gene gene1373 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1347 Sgly_1348 Sgly_1348 Sgly_1348 1342801 1343589 + hypothetical protein KEGG: ngr:NAEGRDRAFT_54456 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1374 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1348 Sgly_1349 Sgly_1349 Sgly_1349 1343586 1346372 + hypothetical protein KEGG: mar:MAE_11600 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1375 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1349 Sgly_1350 Sgly_1350 Sgly_1350 1346374 1347657 + hypothetical protein KEGG: tmz:Tmz1t_2753 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1376 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1350 Sgly_1351 Sgly_1351 Sgly_1351 1347706 1348584 + hypothetical protein KEGG: ter:Tery_1090 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1377 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1351 Sgly_1352 Sgly_1352 Sgly_1352 1348581 1350311 + Hedgehog/intein hint domain protein InterPro IPR006141: IPR003587~KEGG: pay:PAU_02970 hypothetical protein~SMART: Hedgehog/intein hint%2C N-terminal~SPTR: Putative uncharacterized protein%3B~PFAM: Hint module~TIGRFAM: intein N-terminal splicing region gene gene1378 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1352 Sgly_1353 Sgly_1353 Sgly_1353 1350308 1351414 + hypothetical protein KEGG: ccb:Clocel_3248 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1379 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1353 Sgly_1354 Sgly_1354 Sgly_1354 1351427 1352242 + hypothetical protein KEGG: pfr:PFREUD_18870 Methylmalonyl-CoA carboxytransferase 5S subunit. (transcarboxylase 5S) 505 bp~SPTR: Putative uncharacterized protein gene gene1380 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1354 Sgly_1355 Sgly_1355 Sgly_1355 1352239 1355628 + hypothetical protein KEGG: hau:Haur_1972 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1381 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1355 Sgly_1356 Sgly_1356 Sgly_1356 1355618 1356850 + hypothetical protein KEGG: dan:Dana_GF17556 GF17556 gene product from transcript GF17556-RA~SPTR: Putative uncharacterized protein gene gene1382 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1356 Sgly_1357 Sgly_1357 Sgly_1357 1356999 1358255 + hypothetical protein KEGG: tad:TRIADDRAFT_54622 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1383 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1357 Sgly_1358 Sgly_1358 Sgly_1358 1358471 1359013 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog~InterPro IPR007627: IPR013249: IPR014284~KEGG: cno:NT01CX_1174 ECF subfamily RNA polymerase sigma factor~PFAM: RNA polymerase sigma-70 region 2%3B RNA polymerase sigma factor 70%2C region 4 type 2~SPTR: RNA polymerase sigma-70 factor%2C ECF subfamily%2C putative%3B~TIGRFAM: RNA polymerase sigma-70~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family gene gene1384 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1358 Sgly_1359 Sgly_1359 Sgly_1359 1359000 1359761 + hypothetical protein KEGG: cpf:CPF_1093 hypothetical protein~SPTR: Putative membrane protein gene gene1385 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1359 Sgly_1360 Sgly_1360 Sgly_1360 1359748 1360599 + Sulfate-transporting ATPase COGs: COG1131 ABC-type multidrug transport system ATPase component~InterPro IPR003439: IPR003593~KEGG: cpy:Cphy_0914 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Sulfate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related%3B~PFAM: ABC transporter gene gene1386 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1360 Sgly_1361 Sgly_1361 Sgly_1361 1360596 1361747 + hypothetical protein KEGG: cpy:Cphy_0915 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1387 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1361 Sgly_1362 Sgly_1362 Sgly_1362 1361749 1362978 + hypothetical protein KEGG: cpy:Cphy_0916 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1388 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1362 Sgly_1363 Sgly_1363 Sgly_1363 1363255 1363791 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog~InterPro IPR007627: IPR013249: IPR014284~KEGG: ckr:CKR_1639 hypothetical protein~PFAM: RNA polymerase sigma-70 region 2%3B RNA polymerase sigma factor 70%2C region 4 type 2~SPTR: Putative uncharacterized protein%3B~TIGRFAM: RNA polymerase sigma-70~PFAM: Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family gene gene1389 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1363 Sgly_1364 Sgly_1364 Sgly_1364 1363883 1365085 + major facilitator superfamily MFS_1 COGs: COG2807 Cyanate permease~InterPro IPR011701~KEGG: bld:BLi04347 YycB~PFAM: Major facilitator superfamily MFS-1~SPTR: Cyanate transport system protein%3B~PFAM: Major Facilitator Superfamily~TIGRFAM: cyanate transporter gene gene1390 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1364 Sgly_1365 Sgly_1365 Sgly_1365 1365315 1365536 + hypothetical protein KEGG: dhd:Dhaf_2178 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1391 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1365 Sgly_1366 Sgly_1366 Sgly_1366 1365602 1365694 + pseudogene gene1392 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1366 Sgly_1367 Sgly_1367 Sgly_1367 1365983 1366465 + flavodoxin KEGG: ttm:Tthe_0874 flavodoxin~SPTR: Putative uncharacterized protein%3B~PFAM: Flavodoxin-like fold gene gene1393 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1367 Sgly_1368 Sgly_1368 Sgly_1368 1366567 1366938 + Domain of unknown function DUF1801 COGs: COG5646 conserved hypothetical protein~InterPro IPR014922~KEGG: bld:BLi03403 YdhG~PFAM: Protein of unknown function DUF1801~SPTR: Putative uncharacterized protein ydhG%3B~PFAM: Domain of unknown function (DU1801) gene gene1394 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1368 Sgly_1369 Sgly_1369 Sgly_1369 1366973 1367785 + hypothetical protein COGs: COG3910 ATPase~KEGG: ere:EUBREC_3049 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1395 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1369 Sgly_1370 Sgly_1370 Sgly_1370 1367826 1368245 + Domain of unknown function DUF1801 COGs: COG5646 conserved hypothetical protein~InterPro IPR014922~KEGG: dae:Dtox_0462 hypothetical protein~PFAM: Protein of unknown function DUF1801~SPTR: Putative uncharacterized protein%3B~PFAM: Domain of unknown function (DU1801) gene gene1396 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1370 Sgly_1371 Sgly_1371 Sgly_1371 1368242 1368592 + Uncharacterized conserved protein UCP033199 COGs: COG4898 conserved hypothetical protein~InterPro IPR014580~KEGG: dae:Dtox_0463 hypothetical protein~PFAM: Uncharacterised conserved protein UCP033199~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterized protein conserved in bacteria (DUF2200) gene gene1397 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1371 Sgly_1372 Sgly_1372 Sgly_1372 1368872 1369597 + Methyltransferase type 12 COGs: COG2230 Cyclopropane fatty acid synthase and related methyltransferase~InterPro IPR013217~KEGG: dsy:DSY3477 hypothetical protein~PFAM: Methyltransferase type 12~SPTR: Putative uncharacterized protein%3B~PFAM: Methyltransferase domain gene gene1398 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1372 Sgly_1373 Sgly_1373 Sgly_1373 1369955 1371112 + transcriptional regulator%2C PucR family COGs: COG2508 Regulator of polyketide synthase expression~InterPro IPR012914~KEGG: cbe:Cbei_1935 PucR family transcriptional regulator~PFAM: Purine catabolism PurC-like~SPTR: Putative uncharacterized protein%3B~PFAM: Purine catabolism regulatory protein-like family gene gene1399 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1373 Sgly_1374 Sgly_1374 Sgly_1374 1371263 1372600 + Acetylornithine transaminase COGs: COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase~InterPro IPR005814~KEGG: ckr:CKR_2120 hypothetical protein~PFAM: Aminotransferase class-III~PRIAM: Acetylornithine transaminase~SPTR: Putative uncharacterized protein%3B~PFAM: Aminotransferase class-III gene gene1400 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1374 Sgly_1375 Sgly_1375 Sgly_1375 1372644 1373768 + Alcohol dehydrogenase COGs: COG1454 Alcohol dehydrogenase class IV~InterPro IPR001670~KEGG: cth:Cthe_2579 iron-containing alcohol dehydrogenase~PFAM: Alcohol dehydrogenase%2C iron-type~PRIAM: Alcohol dehydrogenase~SPTR: Iron-containing alcohol dehydrogenase%3B~PFAM: Iron-containing alcohol dehydrogenase gene gene1401 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1375 Sgly_1376 Sgly_1376 Sgly_1376 1373822 1375132 + peptidase dimerization domain protein COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase~InterPro IPR002933: IPR011650~KEGG: cby:CLM_3278 peptidase~PFAM: Peptidase M20%2C dimerisation%3B Peptidase M20~SPTR: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases%3B~PFAM: Peptidase family M20/M25/M40%3B Peptidase dimerisation domain~TIGRFAM: putative selenium metabolism hydrolase gene gene1402 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1376 Sgly_1377 Sgly_1377 Sgly_1377 1375166 1376497 + peptidase dimerization domain protein COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase~InterPro IPR002933: IPR011650~KEGG: aco:Amico_0203 peptidase M20~PFAM: Peptidase M20%2C dimerisation%3B Peptidase M20~SPTR: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases%3B~PFAM: Peptidase family M20/M25/M40%3B Peptidase dimerisation domain~TIGRFAM: putative selenium metabolism hydrolase gene gene1403 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1377 Sgly_1378 Sgly_1378 Sgly_1378 1376565 1377935 + dihydropyrimidinase COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase~InterPro IPR006680: IPR011778~KEGG: cbe:Cbei_1942 dihydropyrimidinase~PFAM: Amidohydrolase 1~PRIAM: Dihydropyrimidinase~SPTR: Dihydropyrimidinase%3B~TIGRFAM: D-hydantoinase~PFAM: Amidohydrolase family%3B Urease alpha-subunit%2C N-terminal domain~TIGRFAM: D-hydantoinase%3B dihydroorotase%2C multifunctional complex type gene gene1404 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1378 Sgly_1379 Sgly_1379 Sgly_1379 1377948 1379456 + dihydroorotate oxidase B%2C catalytic subunit COGs: COG0167 Dihydroorotate dehydrogenase~InterPro IPR012135: IPR005720~KEGG: cbe:Cbei_1943 dihydropyrimidine dehydrogenase~PFAM: Dihydroorotate dehydrogenase%2C class 1/ 2~PRIAM: Dihydropyrimidine dehydrogenase (NADP(+))~SPTR: Dihydroorotate dehydrogenase family protein%3B~TIGRFAM: Dihydroorotate dehydrogenase%2C class 1%2C core~PFAM: Dihydroorotate dehydrogenase~TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein gene gene1405 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1379 Sgly_1380 Sgly_1380 Sgly_1380 1379604 1380374 + Taurine-transporting ATPase COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component~InterPro IPR003439: IPR003593~KEGG: cbe:Cbei_1938 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Taurine-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related protein%3B~PFAM: ABC transporter gene gene1406 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1380 Sgly_1381 Sgly_1381 Sgly_1381 1380377 1381165 + binding-protein-dependent transport systems inner membrane component COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component~InterPro IPR000515~KEGG: cbe:Cbei_1939 binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Binding-protein-dependent transport systems inner membrane component%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1407 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1381 Sgly_1382 Sgly_1382 Sgly_1382 1381168 1381935 + binding-protein-dependent transport systems inner membrane component COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component~InterPro IPR000515~KEGG: cbe:Cbei_1940 binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Binding-protein-dependent transport systems inner membrane component%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1408 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1382 Sgly_1383 Sgly_1383 Sgly_1383 1381962 1383008 + NMT1/THI5-like protein COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components~KEGG: cbe:Cbei_1941 NMT1/THI5-like protein~SPTR: NMT1/THI5-like protein%3B~PFAM: NMT1/THI5 like gene gene1409 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1383 Sgly_1384 Sgly_1384 Sgly_1384 1383494 1384222 + CRISPR-associated protein Cas6 COGs: COG1583 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)~InterPro IPR002743: IPR010156~KEGG: dae:Dtox_0913 CRISPR-associated protein Cas6~PFAM: Protein of unknown function DUF57~SPTR: CRISPR-associated protein Cas6%3B~TIGRFAM: CRISPR-associated protein%2C Cas6~PFAM: CRISPR associated protein Cas6~TIGRFAM: CRISPR-associated endoribonuclease Cas6 gene gene1410 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1384 Sgly_1385 Sgly_1385 Sgly_1385 1384238 1385950 + CRISPR-associated protein CXXC_CXXC region InterPro IPR019121: IPR010180~KEGG: dae:Dtox_0914 CRISPR-associated CXXC_CXXC protein Cst1~PFAM: CRISPR-associated protein%2C CXXC-CXXC region~SPTR: CRISPR-associated CXXC_CXXC protein Cst1%3B~TIGRFAM: CRISPR-associated protein%2C CXXC-CXXC~PFAM: CRISPR-associated protein (Cas_CXXC_CXXC)~TIGRFAM: CRISPR-associated CXXC_CXXC protein Cst1 gene gene1411 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1385 Sgly_1386 Sgly_1386 Sgly_1386 1385947 1386819 + CRISPR-associated autoregulator%2C Cst2 family COGs: COG1857 Uncharacterized protein predicted to be involved in DNA repair~InterPro IPR010154: IPR013414~KEGG: dae:Dtox_0915 CRISPR-associated autoregulator%2C DevR family~SPTR: CRISPR-associated autoregulator%2C DevR family%3B~TIGRFAM: CRISPR-associated regulatory DevR%3B CRISPR-associated negative autoregulator~TIGRFAM: CRISPR-associated autoregulator DevR family%3B CRISPR-associated regulatory protein%2C DevR family gene gene1412 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1386 Sgly_1387 Sgly_1387 Sgly_1387 1386806 1387564 + CRISPR-associated protein%2C Cas5t family InterPro IPR013337: IPR013422~KEGG: dae:Dtox_0916 CRISPR-associated protein Cas5~SPTR: CRISPR-associated protein Cas5%3B~TIGRFAM: CRISPR-associated protein Cas5%2C N-terminal domain%3B CRISPR-associated protein Cas5%2C Tneap type~PFAM: CRISPR-associated protein (Cas_Cas5)~TIGRFAM: CRISPR-associated protein Cas5%2C Tneap subtype%3B CRISPR-associated protein Cas5%2C N-terminal domain gene gene1413 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1387 Sgly_1388 Sgly_1388 Sgly_1388 1387662 1390058 + CRISPR-associated helicase Cas3 COGs: COG1203 helicase~InterPro IPR006483: IPR006474: IPR014001~KEGG: dae:Dtox_0917 CRISPR-associated helicase Cas3~SMART: DEAD-like helicase%2C N-terminal~SPTR: CRISPR-associated helicase Cas3%3B~TIGRFAM: Helicase Cas3%2C CRISPR-associated%2C core%3B CRISPR-associated HD domain~PFAM: HD domain~TIGRFAM: CRISPR-associated helicase Cas3%3B CRISPR-associated endonuclease Cas3-HD gene gene1414 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1388 Sgly_1389 Sgly_1389 Sgly_1389 1390107 1390601 + CRISPR-associated exonuclease%2C Cas4 family COGs: COG1468 RecB family exonuclease~InterPro IPR013343~KEGG: dae:Dtox_0918 CRISPR-associated protein Cas4~SPTR: CRISPR-associated protein Cas4%3B~TIGRFAM: CRISPR-associated protein Cas4~PFAM: Domain of unknown function DUF83~TIGRFAM: CRISPR-associated protein Cas4 gene gene1415 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1389 Sgly_1390 Sgly_1390 Sgly_1390 1390613 1391605 + CRISPR-associated protein%2C Cas1 family COGs: COG1518 Uncharacterized protein predicted to be involved in DNA repair~InterPro IPR002729: IPR019858~KEGG: dae:Dtox_0919 CRISPR-associated protein Cas1~PFAM: CRISPR-associated protein Cas1~SPTR: CRISPR-associated protein Cas1%3B~TIGRFAM: CRISPR-associated protein Cas1%2C HMARI/TNEAP subtype%3B CRISPR-associated protein Cas1~PFAM: CRISPR associated protein Cas1~TIGRFAM: CRISPR-associated endonuclease Cas1%2C HMARI/TNEAP subtype%3B CRISPR-associated endonuclease Cas1 gene gene1416 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1390 Sgly_1391 Sgly_1391 Sgly_1391 1391612 1391890 + CRISPR-associated protein%2C Cas2 family COGs: COG1343 Uncharacterized protein predicted to be involved in DNA repair~InterPro IPR021127~KEGG: dae:Dtox_0920 CRISPR-associated protein Cas2~SPTR: CRISPR-associated protein Cas2%3B~TIGRFAM: CRISPR associated protein Cas2~PFAM: CRISPR associated protein Cas2~TIGRFAM: CRISPR-associated endoribonuclease Cas2 gene gene1417 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1391 Sgly_1392 Sgly_1392 Sgly_1392 1393803 1394090 + transposase IS3/IS911 family protein InterPro IPR002514~KEGG: gtn:GTNG_0758 transposase~PFAM: Transposase IS3/IS911~SPTR: Transposase(AGR_pAT_536p)%3B~PFAM: Transposase gene gene1418 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1392 Sgly_1393 Sgly_1393 Sgly_1393 1394087 1394548 + pseudogene gene1419 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1393 Sgly_1394 Sgly_1394 Sgly_1394 1395006 1396028 - integral membrane sensor signal transduction histidine kinase COGs: COG0642 Signal transduction histidine kinase~InterPro IPR003594~KEGG: aoe:Clos_0983 integral membrane sensor signal transduction histidine kinase~PFAM: ATPase-like%2C ATP-binding domain~SMART: ATPase-like%2C ATP-binding domain~SPTR: Putative uncharacterized protein%3B~PFAM: Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase gene gene1420 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1394 Sgly_1395 Sgly_1395 Sgly_1395 1396025 1396705 - two component transcriptional regulator%2C winged helix family COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR001789: IPR001867~KEGG: aoe:Clos_0982 two component transcriptional regulator~PFAM: Signal transduction response regulator%2C receiver domain%3B Signal transduction response regulator%2C C-terminal~SMART: Signal transduction response regulator%2C receiver domain~SPTR: Putative uncharacterized protein%3B~PFAM: Response regulator receiver domain%3B Transcriptional regulatory protein%2C C terminal gene gene1421 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1395 Sgly_1396 Sgly_1396 Sgly_1396 1396705 1398786 - protein of unknown function DUF214 InterPro IPR003838~KEGG: aoe:Clos_0981 hypothetical protein~PFAM: Protein of unknown function DUF214%2C permase predicted~SPTR: Putative uncharacterized protein%3B~PFAM: Predicted permease gene gene1422 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1396 Sgly_1397 Sgly_1397 Sgly_1397 1398776 1399555 - Phosphonate-transporting ATPase COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component~InterPro IPR003439: IPR003593~KEGG: aoe:Clos_0980 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Phosphonate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ABC transporter gene gene1423 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1397 Sgly_1398 Sgly_1398 Sgly_1398 1399804 1400673 + Radical SAM domain protein COGs: COG1533 DNA repair photolyase~InterPro IPR007197~KEGG: mla:Mlab_0619 hypothetical protein~PFAM: Radical SAM~SPTR: Radical SAM domain protein%3B~PFAM: Radical SAM superfamily gene gene1424 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1398 Sgly_1399 Sgly_1399 Sgly_1399 1400872 1401414 + Peroxiredoxin COGs: COG0386 Glutathione peroxidase~InterPro IPR000889~KEGG: cno:NT01CX_2376 glutathione peroxidase~PFAM: Glutathione peroxidase~PRIAM: Peroxiredoxin~SPTR: Glutathione peroxidase%3B~PFAM: Glutathione peroxidase gene gene1425 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1399 Sgly_1400 Sgly_1400 Sgly_1400 1401429 1401872 + transcriptional regulator%2C MarR family COGs: COG1846 Transcriptional regulators~InterPro IPR000835~KEGG: shi:Shel_20780 transcriptional regulator%2C MarR family~PFAM: HTH transcriptional regulator%2C MarR~SMART: HTH transcriptional regulator%2C MarR~SPTR: Transcriptional regulator%2C MarR family%3B~PFAM: MarR family gene gene1426 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1400 Sgly_1401 Sgly_1401 Sgly_1401 1402018 1402248 - hypothetical protein SPTR: Putative uncharacterized protein gene gene1427 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1401 Sgly_1402 Sgly_1402 Sgly_1402 1402374 1402706 - addiction module antitoxin%2C RelB/DinJ family InterPro IPR007337~KEGG: dae:Dtox_0414 addiction module antitoxin%2C RelB/DinJ family~PFAM: RelB antitoxin~SPTR: Addiction module antitoxin%2C RelB/DinJ family%3B~TIGRFAM: RelB antitoxin~PFAM: RelB antitoxin~TIGRFAM: addiction module antitoxin%2C RelB/DinJ family gene gene1428 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1402 Sgly_1403 Sgly_1403 Sgly_1403 1402771 1404924 + Tex-like protein COGs: COG2183 Transcriptional accessory protein~InterPro IPR018974: IPR003029: IPR006641~KEGG: cth:Cthe_1955 RNA binding S1~PFAM: Tex-like protein%2C N-terminal%3B Ribosomal protein S1%2C RNA binding domain~SMART: Resolvase%2C RNase H-like fold~SPTR: Tex-like protein-like protein%3B~PFAM: Tex-like protein N-terminal domain%3B S1 RNA binding domain~TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region gene gene1429 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1403 Sgly_1404 Sgly_1404 Sgly_1404 1405081 1405935 - ABC-2 type transporter InterPro IPR013525~KEGG: dhd:Dhaf_3239 ABC-2 type transporter~PFAM: ABC-2 type transporter~SPTR: Putative uncharacterized protein%3B~PFAM: ABC-2 type transporter gene gene1430 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1404 Sgly_1405 Sgly_1405 Sgly_1405 1405932 1406846 - Sulfate-transporting ATPase COGs: COG1131 ABC-type multidrug transport system ATPase component~InterPro IPR003439: IPR003593~KEGG: dhd:Dhaf_3238 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Sulfate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ABC transporter gene gene1431 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1405 Sgly_1406 Sgly_1406 Sgly_1406 1406992 1409103 - Catalase COGs: COG0753 Catalase~InterPro IPR018028: IPR010582: IPR002818~KEGG: amt:Amet_0511 catalase~PFAM: Catalase related subgroup%3B Catalase-related immune responsive%3B ThiJ/PfpI~PRIAM: Catalase~SPTR: Catalase%3B~PFAM: Catalase%3B DJ-1/PfpI family%3B Catalase-related immune-responsive gene gene1432 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1406 Sgly_1407 Sgly_1407 Sgly_1407 1409508 1410731 + Radical SAM domain protein COGs: COG0535 Fe-S oxidoreductase~InterPro IPR007197: IPR006638~KEGG: dhd:Dhaf_3352 radical SAM domain protein~PFAM: Radical SAM~SMART: Elongator protein 3/MiaB/NifB~SPTR: Putative uncharacterized protein%3B~PFAM: Radical SAM superfamily gene gene1433 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1407 Sgly_1408 Sgly_1408 Sgly_1408 1410728 1411726 + Radical SAM domain protein COGs: COG0535 Fe-S oxidoreductase~InterPro IPR007197: IPR006638~KEGG: dhd:Dhaf_3350 radical SAM domain protein~PFAM: Radical SAM~SMART: Elongator protein 3/MiaB/NifB~SPTR: Radical SAM domain protein%3B~PFAM: Radical SAM superfamily gene gene1434 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1408 Sgly_1409 Sgly_1409 Sgly_1409 1411726 1412958 + transcriptional regulator%2C AsnC family COGs: COG1522 Transcriptional regulators~InterPro IPR019888~KEGG: dhd:Dhaf_3349 putative transcriptional regulator%2C AsnC family~SMART: Transcription regulator AsnC-type~SPTR: Putative uncharacterized protein gene gene1435 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1409 Sgly_1410 Sgly_1410 Sgly_1410 1413032 1414879 + cell envelope-related transcriptional attenuator COGs: COG1316 Transcriptional regulator~InterPro IPR004474~KEGG: dsy:DSY2942 hypothetical protein~PFAM: Cell envelope-related transcriptional attenuator~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Cell envelope-related transcriptional attenuator~PFAM: Cell envelope-related transcriptional attenuator domain~TIGRFAM: cell envelope-related function transcriptional attenuator common domain gene gene1436 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1410 Sgly_1411 Sgly_1411 Sgly_1411 1415524 1416672 + diguanylate cyclase COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain~InterPro IPR000160~KEGG: ssm:Spirs_4224 diguanylate cyclase~PFAM: Diguanylate cyclase%2C predicted~SMART: Diguanylate cyclase%2C predicted~SPTR: Diguanylate cyclase%3B~TIGRFAM: Diguanylate cyclase%2C predicted~PFAM: GGDEF domain~TIGRFAM: diguanylate cyclase (GGDEF) domain gene gene1437 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1411 Sgly_1412 Sgly_1412 Sgly_1412 1416780 1417346 + hypothetical protein KEGG: ptm:GSPATT00035006001 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1438 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1412 Sgly_1413 Sgly_1413 Sgly_1413 1417340 1417978 - hypothetical protein KEGG: dhd:Dhaf_2503 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1439 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1413 Sgly_1414 Sgly_1414 Sgly_1414 1418182 1418544 - Dinitrogenase iron-molybdenum cofactor biosynthesis protein COGs: COG1433 conserved hypothetical protein~InterPro IPR003731~KEGG: cbe:Cbei_2961 dinitrogenase iron-molybdenum cofactor biosynthesis protein~PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis~SPTR: Dinitrogenase iron-molybdenum cofactor biosynthesis protein%3B~PFAM: Dinitrogenase iron-molybdenum cofactor gene gene1440 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1414 Sgly_1415 Sgly_1415 Sgly_1415 1418701 1419528 + metallo-beta-lactamase family protein COGs: COG1237 Metal-dependent hydrolase of the beta-lactamase superfamily II~KEGG: cpe:CPE0924 metallo-beta-lactamase family protein~SPTR: Putative uncharacterized protein%3B~PFAM: Metallo-beta-lactamase superfamily gene gene1441 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1415 Sgly_1416 Sgly_1416 Sgly_1416 1419701 1420201 + flavin reductase domain protein FMN-binding protein COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family~InterPro IPR002563~KEGG: clj:CLJU_c37820 putative flavoredoxin~PFAM: Flavin reductase-like%2C FMN-binding~SPTR: Putative flavoredoxin%3B~PFAM: Flavin reductase like domain gene gene1442 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1416 Sgly_1417 Sgly_1417 Sgly_1417 1420287 1420946 + protein of unknown function DUF1847 COGs: COG4887 Uncharacterized metal-binding protein~InterPro IPR014997~KEGG: cth:Cthe_2788 hypothetical protein~PFAM: Protein of unknown function DUF1847~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1847) gene gene1443 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1417 Sgly_1418 Sgly_1418 Sgly_1418 1421193 1421675 - regulatory protein MarR InterPro IPR000835~KEGG: ara:Arad_4437 transcriptional regulator protein~PFAM: HTH transcriptional regulator%2C MarR~SMART: HTH transcriptional regulator%2C MarR~SPTR: Transcriptional regulator protein%3B~PFAM: MarR family gene gene1444 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1418 Sgly_1419 Sgly_1419 Sgly_1419 1421679 1422200 - hypothetical protein KEGG: ssa:SSA_0714 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1445 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1419 Sgly_1420 Sgly_1420 Sgly_1420 1422234 1422596 - hypothetical protein KEGG: bbe:BBR47_45440 hypothetical protein~SPTR: Conserved hypothetical membrane protein gene gene1446 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1420 Sgly_1421 Sgly_1421 Sgly_1421 1422745 1423242 + UPF0251 protein COGs: COG1342 DNA-binding protein~HAMAP: UPF0251 protein~InterPro IPR002852~KEGG: cbl:CLK_0815 hypothetical protein~PFAM: Uncharacterised protein family UPF0251~SPTR: UPF0251 protein CLK_0815%3B~PFAM: Protein of unknown function DUF134 gene gene1447 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1421 Sgly_1422 Sgly_1422 Sgly_1422 1423346 1423519 - hypothetical protein KEGG: cbk:CLL_A1320 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1448 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1422 Sgly_1423 Sgly_1423 Sgly_1423 1423678 1424064 + UPF0251 protein COGs: COG1342 DNA-binding protein~HAMAP: UPF0251 protein~InterPro IPR002852~KEGG: amt:Amet_1463 hypothetical protein~PFAM: Uncharacterised protein family UPF0251~SPTR: UPF0251 protein Amet_1463%3B~PFAM: Protein of unknown function DUF134 gene gene1449 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1423 Sgly_1424 Sgly_1424 Sgly_1424 1424149 1425006 + modD protein COGs: COG0157 Nicotinate-nucleotide pyrophosphorylase~InterPro IPR002638: IPR006242~KEGG: clj:CLJU_c38070 nicotinate-nucleotide diphosphorylase~PFAM: Quinolinate phosphoribosyl transferase~PRIAM: Nicotinate-nucleotide diphosphorylase (carboxylating)~SPTR: ModD protein%3B~TIGRFAM: Putative molybdenum utilization protein ModD~PFAM: Quinolinate phosphoribosyl transferase%2C C-terminal domain%3B Quinolinate phosphoribosyl transferase%2C N-terminal domain~TIGRFAM: nicotinate-nucleotide pyrophosphorylase%3B putative molybdenum utilization protein ModD gene gene1450 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1424 Sgly_1425 Sgly_1425 Sgly_1425 1425123 1427156 + sodium/proton antiporter%2C CPA1 family COGs: COG0025 NhaP-type Na+/H+ and K+/H+ antiporter~InterPro IPR006153: IPR004705~KEGG: bmd:BMD_2858 Na+/H+ antiporter~PFAM: Cation/H+ exchanger~SPTR: Na+/H+ antiporter%3B~TIGRFAM: Na+/H+ exchanger%2C yjcE-like%2C bacteria~PFAM: Sodium/hydrogen exchanger family~TIGRFAM: Na+/H+ antiporter%2C bacterial form%3B (TC 2.A.36 gene gene1451 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1425 Sgly_1426 Sgly_1426 Sgly_1426 1427176 1427306 + pseudogene gene1452 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1426 Sgly_1427 Sgly_1427 Sgly_1427 1427618 1429033 + deoxyguanosinetriphosphate triphosphohydrolase COGs: COG0232 dGTP triphosphohydrolase~InterPro IPR006674: IPR006261: IPR003607~KEGG: bgl:bglu_1g01530 deoxyguanosinetriphosphate triphosphohydrolase~PFAM: Metal-dependent phosphohydrolase%2C HD subdomain~SMART: Metal-dependent phosphohydrolase%2C HD domain~SPTR: Deoxyguanosinetriphosphate triphosphohydrolase%3B~TIGRFAM: Deoxyguanosinetriphosphate triphosphohydrolase~PFAM: HD domain~TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase%2C putative gene gene1453 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1427 Sgly_1428 Sgly_1428 Sgly_1428 1429266 1430687 + major facilitator superfamily MFS_1 COGs: COG2814 Arabinose efflux permease~InterPro IPR011701~KEGG: ccb:Clocel_3231 major facilitator superfamily MFS_1~PFAM: Major facilitator superfamily MFS-1~SPTR: Major facilitator superfamily MFS_1%3B~PFAM: Major Facilitator Superfamily~TIGRFAM: drug resistance transporter%2C EmrB/QacA subfamily gene gene1454 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1428 Sgly_1429 Sgly_1429 Sgly_1429 1430770 1431567 + hypothetical protein KEGG: gca:Galf_1496 TIR protein~SPTR: TIR protein gene gene1455 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1429 Sgly_1430 Sgly_1430 Sgly_1430 1431741 1432988 + DNA polymerase IV COGs: COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair~HAMAP: DNA polymerase IV~InterPro IPR001126~KEGG: dsy:DSY3422 hypothetical protein~PFAM: DNA-repair protein%2C UmuC-like~PRIAM: DNA-directed DNA polymerase~SPTR: Putative uncharacterized protein%3B~PFAM: impB/mucB/samB family C-terminal%3B IMS family HHH motif%3B impB/mucB/samB family gene gene1456 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1430 Sgly_1431 Sgly_1431 Sgly_1431 1433000 1433248 + hypothetical protein KEGG: nth:Nther_0281 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1457 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1431 Sgly_1432 Sgly_1432 Sgly_1432 1433446 1433952 + nitroreductase COGs: COG0778 Nitroreductase~InterPro IPR000415~KEGG: cpy:Cphy_1294 nitroreductase~PFAM: Nitroreductase-like~SPTR: Nitroreductase%3B~PFAM: Nitroreductase family gene gene1458 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1432 Sgly_1433 Sgly_1433 Sgly_1433 1433973 1434851 + nitroreductase InterPro IPR000415~KEGG: dhd:Dhaf_2590 nitroreductase~PFAM: Nitroreductase-like~SPTR: Putative uncharacterized protein%3B~PFAM: Nitroreductase family gene gene1459 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1433 Sgly_1434 Sgly_1434 Sgly_1434 1435154 1436452 + O-acetylhomoserine sulfhydrolase COGs: COG2873 O-acetylhomoserine sulfhydrylase~InterPro IPR000277~KEGG: ckr:CKR_1913 hypothetical protein~PFAM: Cys/Met metabolism%2C pyridoxal phosphate-dependent enzyme~PRIAM: Cysteine synthase~SPTR: Putative uncharacterized protein%3B~PFAM: Cys/Met metabolism PLP-dependent enzyme gene gene1460 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1434 Sgly_1435 Sgly_1435 Sgly_1435 1436459 1436959 + GCN5-related N-acetyltransferase InterPro IPR000182~KEGG: dsy:DSY3675 hypothetical protein~PFAM: GCN5-related N-acetyltransferase~SPTR: Putative uncharacterized protein%3B~PFAM: Acetyltransferase (GNAT) family gene gene1461 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1435 Sgly_1436 Sgly_1436 Sgly_1436 1436974 1438449 + oxidoreductase/nitrogenase component 1 COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains~InterPro IPR000510~KEGG: cth:Cthe_1565 nitrogenase~PFAM: Nitrogenase/oxidoreductase%2C component 1~SPTR: Nitrogenase%3B~PFAM: Nitrogenase component 1 type Oxidoreductase gene gene1462 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1436 Sgly_1437 Sgly_1437 Sgly_1437 1438446 1439789 + oxidoreductase/nitrogenase component 1 COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains~InterPro IPR000510~KEGG: cth:Cthe_1566 nitrogenase~PFAM: Nitrogenase/oxidoreductase%2C component 1~SPTR: Nitrogenase%3B~PFAM: Nitrogenase component 1 type Oxidoreductase gene gene1463 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1437 Sgly_1438 Sgly_1438 Sgly_1438 1439893 1441209 + O-acetylhomoserine sulfhydrolase COGs: COG2873 O-acetylhomoserine sulfhydrylase~InterPro IPR000277~KEGG: cth:Cthe_1569 O-acetylhomoserine aminocarboxypropyltransferase~PFAM: Cys/Met metabolism%2C pyridoxal phosphate-dependent enzyme~PRIAM: Cysteine synthase~SPTR: O-acetylhomoserine aminocarboxypropyltransferase%3B~PFAM: Cys/Met metabolism PLP-dependent enzyme gene gene1464 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1438 Sgly_1439 Sgly_1439 Sgly_1439 1441303 1442343 + extracellular solute-binding protein family 3 COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components~InterPro IPR001638~KEGG: cth:Cthe_1570 extracellular solute-binding protein~SMART: Extracellular solute-binding protein%2C family 3~SPTR: Extracellular solute-binding protein%2C family 3%3B~PFAM: NMT1/THI5 like gene gene1465 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1439 Sgly_1440 Sgly_1440 Sgly_1440 1442371 1443393 + binding-protein-dependent transport systems inner membrane component COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component~InterPro IPR000515~KEGG: cth:Cthe_1571 binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Binding-protein-dependent transport systems inner membrane component%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1466 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1440 Sgly_1441 Sgly_1441 Sgly_1441 1443390 1444175 + Taurine-transporting ATPase COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component~InterPro IPR003439: IPR003593~KEGG: cth:Cthe_1572 ABC transporter related protein~PFAM: ABC transporter-like~PRIAM: Taurine-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related protein%3B~PFAM: ABC transporter gene gene1467 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1441 Sgly_1442 Sgly_1442 Sgly_1442 1444273 1444899 - Lysine exporter protein (LYSE/YGGA) InterPro IPR001123~KEGG: bbe:BBR47_43570 hypothetical protein~PFAM: Lysine exporter protein (LYSE/YGGA)~SPTR: Translocator protein%2C LysE family%3B~PFAM: LysE type translocator gene gene1468 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1442 Sgly_1443 Sgly_1443 Sgly_1443 1445181 1445978 + filamentation induced by cAMP protein Fic COGs: COG3177 conserved hypothetical protein~InterPro IPR003812~KEGG: mbu:Mbur_1635 filamentation induced by cAMP protein Fic~PFAM: Filamentation induced by cAMP/death on curing%2C related~SPTR: Putative uncharacterized protein%3B~PFAM: Fic/DOC family gene gene1469 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1443 Sgly_1444 Sgly_1444 Sgly_1444 1446382 1446657 + putative cell wall binding repeat 2-containing protein KEGG: dhd:Dhaf_1937 putative cell wall binding repeat 2-containing protein~SPTR: Putative uncharacterized protein%3B~PFAM: Putative cell wall binding repeat 2 gene gene1470 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1444 Sgly_1445 Sgly_1445 Sgly_1445 1446751 1446960 - hypothetical protein KEGG: nve:NEMVE_v1g114044 hypothetical protein~SPTR: Basic tail salivary tick protein gene gene1471 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1445 Sgly_1446 Sgly_1446 Sgly_1446 1447449 1448018 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog~InterPro IPR007627: IPR013249: IPR014284~KEGG: cbl:CLK_3193 RNA polymerase factor sigma-70~PFAM: RNA polymerase sigma-70 region 2%3B RNA polymerase sigma factor 70%2C region 4 type 2~SPTR: RNA polymerase factor sigma-70%3B~TIGRFAM: RNA polymerase sigma-70~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family gene gene1472 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1446 Sgly_1447 Sgly_1447 Sgly_1447 1448011 1449453 + hypothetical protein KEGG: cby:CLM_0064 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1473 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1447 Sgly_1448 Sgly_1448 Sgly_1448 1449753 1449872 - hypothetical protein KEGG: dhd:Dhaf_3209 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1474 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1448 Sgly_1449 Sgly_1449 Sgly_1449 1449917 1451524 - hypothetical protein KEGG: mac:MA1107 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1475 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1449 Sgly_1450 Sgly_1450 Sgly_1450 1451521 1452228 - ABC transporter related protein COGs: COG1131 ABC-type multidrug transport system ATPase component~InterPro IPR003439: IPR003593~KEGG: mac:MA1106 gliding motility protein~PFAM: ABC transporter-like~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ABC transporter gene gene1476 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1450 Sgly_1451 Sgly_1451 Sgly_1451 1452514 1452888 + transcriptional repressor%2C CopY family COGs: COG3682 transcriptional regulator protein~InterPro IPR005650~KEGG: swo:Swol_0429 CopY family transcriptional regulator~PFAM: Penicillinase repressor~SPTR: Transcriptional repressor%2C CopY family%3B~PFAM: Penicillinase repressor gene gene1477 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1451 Sgly_1452 Sgly_1452 Sgly_1452 1453606 1454139 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog~InterPro IPR007627: IPR013249: IPR014284~KEGG: cdl:CDR20291_3288 hypothetical protein~PFAM: RNA polymerase sigma factor 70%2C region 4 type 2%3B RNA polymerase sigma-70 region 2~SPTR: RNA polymerase sigma-70 factor%3B~TIGRFAM: RNA polymerase sigma-70~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family gene gene1478 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1452 Sgly_1453 Sgly_1453 Sgly_1453 1454136 1454813 + hypothetical protein KEGG: cdl:CDR20291_3287 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1479 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1453 Sgly_1454 Sgly_1454 Sgly_1454 1454906 1455346 + hypothetical protein KEGG: aoe:Clos_0732 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1480 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1454 Sgly_1455 Sgly_1455 Sgly_1455 1455401 1456108 + hypothetical protein KEGG: btk:BT9727_1597 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1481 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1455 Sgly_1456 Sgly_1456 Sgly_1456 1456872 1457336 + transposase-like protein KEGG: sat:SYN_03180 transposase and inactivated derivatives~SPTR: Transposase and inactivated derivatives gene gene1482 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1456 Sgly_1457 Sgly_1457 Sgly_1457 1457387 1458013 + transposase KEGG: rha:RHA1_ro08020 transposase~SPTR: Transposase gene gene1483 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1457 Sgly_1458 Sgly_1458 Sgly_1458 1458163 1458840 + hypothetical protein KEGG: bcu:BCAH820_1175 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1484 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1458 Sgly_1459 Sgly_1459 Sgly_1459 1458982 1460250 + Integrase catalytic region COGs: COG4584 Transposase and inactivated derivatives~InterPro IPR001584~KEGG: bha:BH3965 transposase (22)~PFAM: Integrase%2C catalytic core~SPTR: Integrase catalytic region%3B~PFAM: Integrase core domain gene gene1485 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1459 Sgly_1460 Sgly_1460 Sgly_1460 1460487 1461221 + IstB domain protein ATP-binding protein COGs: COG1484 DNA replication protein~InterPro IPR002611: IPR003593~KEGG: dsy:DSY0836 hypothetical protein~PFAM: IstB-like ATP-binding protein~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: IstB-like ATP binding protein gene gene1486 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1460 Sgly_1461 Sgly_1461 Sgly_1461 1461710 1462044 + pseudogene gene1487 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1461 Sgly_1462 Sgly_1462 Sgly_1462 1462431 1462925 + hypothetical protein KEGG: fsu:Fisuc_1282 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1488 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1462 Sgly_1463 Sgly_1463 Sgly_1463 1462996 1463727 + hypothetical protein KEGG: sad:SAAV_0127 capsular polysaccharide biosynthesis protein Cap5K~SPTR: Capsular polysaccharide synthesis enzyme Cap5K gene gene1489 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1463 Sgly_1464 Sgly_1464 Sgly_1464 1463960 1465204 + proteinase inhibitor I4 serpin COGs: COG4826 Serine protease inhibitor~InterPro IPR000215~KEGG: amt:Amet_2165 proteinase inhibitor I4%2C serpin~PFAM: Protease inhibitor I4%2C serpin~SMART: Protease inhibitor I4%2C serpin~SPTR: Proteinase inhibitor I4%2C serpin%3B~PFAM: Serpin (serine protease inhibitor) gene gene1490 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1464 Sgly_1465 Sgly_1465 Sgly_1465 1465314 1465589 - protein of unknown function DUF156 COGs: COG1937 conserved hypothetical protein~InterPro IPR003735~KEGG: ckr:CKR_2414 hypothetical protein~PFAM: Protein of unknown function DUF156~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterised BCR%2C COG1937 gene gene1491 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1465 Sgly_1466 Sgly_1466 Sgly_1466 1465746 1467608 + heavy metal translocating P-type ATPase COGs: COG2217 Cation transport ATPase~InterPro IPR008250: IPR005834: IPR006404: IPR006416: IPR 001757~KEGG: dhd:Dhaf_0093 heavy metal translocating P-type ATPase~PFAM: ATPase%2C P-type%2C ATPase-associated domain%3B Haloacid dehalogenase-like hydrolase~PRIAM: Copper-exporting ATPase~SPTR: Heavy metal translocating P-type ATPase%3B~TIGRFAM: ATPase%2C P-type%2C heavy metal translocating%3B ATPase%2C P-type%2C heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating%3B ATPase%2C P-type%2C K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter~PFAM: E1-E2 ATPase%3B haloacid dehalogenase-like hydrolase~TIGRFAM: copper-(or silver)-translocating P-type ATPase%3B heavy metal translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC%3B heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase gene gene1492 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1466 Sgly_1467 Sgly_1467 Sgly_1467 1467949 1469247 + protein of unknown function DUF21 COGs: COG1253 Hemolysins and related protein containing CBS domains~InterPro IPR002550: IPR000644: IPR005170~KEGG: cth:Cthe_2870 hypothetical protein~PFAM: Protein of unknown function DUF21%3B Cystathionine beta-synthase%2C core%3B Transporter-associated domain~SPTR: Putative uncharacterized protein%3B~PFAM: CBS domain%3B Domain of unknown function DUF21%3B Transporter associated domain gene gene1493 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1467 Sgly_1468 Sgly_1468 Sgly_1468 1469292 1470263 - hypothetical protein KEGG: tne:Tneu_1608 ribonucleoside-diphosphate reductase%2C adenosylcobalamin-dependent~SPTR: Ribonucleoside-diphosphate reductase gene gene1494 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1468 Sgly_1469 Sgly_1469 Sgly_1469 1470671 1470931 + hypothetical protein KEGG: dhd:Dhaf_0862 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1495 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1469 Sgly_1470 Sgly_1470 Sgly_1470 1470996 1471388 - pyridoxamine 5'-phosphate oxidase-related FMN-binding protein COGs: COG5015 conserved hypothetical protein~InterPro IPR011576~KEGG: clj:CLJU_c37110 putative pyridoxamine 5'-phosphate oxidase-like%2C FMN-binding protein~PFAM: Pyridoxamine 5'-phosphate oxidase-like%2C FMN-binding domain~SPTR: Putative pyridoxamine 5'-phosphate oxidase-related%2C FMN-binding protein%3B~PFAM: Pyridoxamine 5'-phosphate oxidase gene gene1496 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1470 Sgly_1471 Sgly_1471 Sgly_1471 1471501 1473168 - hypothetical protein KEGG: ccb:Clocel_1261 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1497 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1471 Sgly_1472 Sgly_1472 Sgly_1472 1473392 1474735 - Radical SAM domain protein COGs: COG0535 Fe-S oxidoreductase~InterPro IPR007197~KEGG: nth:Nther_0555 radical SAM domain protein~PFAM: Radical SAM~SPTR: Radical SAM domain protein%3B~PFAM: Radical SAM superfamily gene gene1498 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1472 Sgly_1473 Sgly_1473 Sgly_1473 1474932 1475636 - regulatory protein GntR HTH COGs: COG2186 Transcriptional regulators~InterPro IPR000524: IPR011711~KEGG: cpy:Cphy_1313 regulatory protein GntR HTH~PFAM: HTH transcriptional regulator%2C GntR%3B GntR%2C C-terminal~SMART: HTH transcriptional regulator%2C GntR~SPTR: Regulatory protein GntR HTH%3B~PFAM: Bacterial regulatory proteins%2C gntR family%3B FCD domain gene gene1499 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1473 Sgly_1474 Sgly_1474 Sgly_1474 1475976 1477748 + Xenobiotic-transporting ATPase COGs: COG4988 ABC-type transport system involved in cytochrome bd biosynthesis ATPase and permease components~InterPro IPR001140: IPR003439: IPR003593~KEGG: bhy:BHWA1_02345 ABC-type transport system %2C ATPase and permease components~PFAM: ABC transporter-like%3B ABC transporter%2C transmembrane domain~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ABC transporter%3B ABC transporter transmembrane region~TIGRFAM: thiol reductant ABC exporter%2C CydD subunit gene gene1500 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1474 Sgly_1475 Sgly_1475 Sgly_1475 1477745 1479403 + Xenobiotic-transporting ATPase COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterPro IPR003439: IPR003593~KEGG: brm:Bmur_2303 ABC transporter related protein~PFAM: ABC transporter-like~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ABC transporter%3B ABC transporter transmembrane region gene gene1501 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1475 Sgly_1476 Sgly_1476 Sgly_1476 1479490 1480041 + Conserved hypothetical CHP02185%2C integral membrane protein InterPro IPR011733~KEGG: rrs:RoseRS_3102 hypothetical protein~PFAM: Conserved hypothetical CHP02185%2C integral membrane~SPTR: Putative uncharacterized protein%3B~PFAM: Hypothetical bacterial integral membrane protein (Trep_Strep)~TIGRFAM: conserved hypothetical integral membrane protein TIGR02185 gene gene1502 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1476 Sgly_1477 Sgly_1477 Sgly_1477 1480043 1480756 + cobalt transport protein InterPro IPR003339~KEGG: rrs:RoseRS_3101 cobalt transport protein~PFAM: Cobalt transport protein~SPTR: Cobalt transport protein%3B~PFAM: Cobalt transport protein gene gene1503 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1477 Sgly_1478 Sgly_1478 Sgly_1478 1480804 1482252 + Monosaccharide-transporting ATPase COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase~InterPro IPR003439: IPR003593~KEGG: rrs:RoseRS_3100 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Monosaccharide-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related%3B~PFAM: ABC transporter gene gene1504 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1478 Sgly_1479 Sgly_1479 Sgly_1479 1482304 1483119 + NEAr transporter InterPro IPR006635: IPR001367~KEGG: sta:STHERM_c06290 iron-dependent repressor~PFAM: NEAr transporter~SMART: Iron dependent repressor~SPTR: Putative uncharacterized protein%3B~PFAM: Iron dependent repressor%2C N-terminal DNA binding domain gene gene1505 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1479 Sgly_1480 Sgly_1480 Sgly_1480 1483543 1484013 + hypothetical protein KEGG: lmc:Lm4b_02213 hypothetical protein~SPTR: Putative pilin gene gene1506 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1480 Sgly_1481 Sgly_1481 Sgly_1481 1484185 1484697 - flavodoxin family protein KEGG: tde:TDE1177 flavodoxin family protein~SPTR: Flavodoxin family protein gene gene1507 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1481 Sgly_1482 Sgly_1482 Sgly_1482 1485401 1485928 + hypothetical protein KEGG: pcs:Pc18g02900 lysophospholipase phospholipase B plb1-Penicillium chrysogenum~SPTR: Probable phosphate ABC transporter%2C permease protein (PstA) gene gene1508 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1482 Sgly_1483 Sgly_1483 Sgly_1483 1486623 1499642 + cell wall binding repeat 2-containing protein COGs: COG4886 Leucine-rich repeat (LRR) protein~InterPro IPR001611: IPR006635: IPR007253: IPR003591~KEGG: dhd:Dhaf_1699 protein of unknown function DUF1533~PFAM: Putative cell wall binding repeat 2%3B NEAr transporter%3B Leucine-rich repeat~SMART: NEAr transporter%3B Leucine-rich repeat%2C typical subtype~SPTR: Putative uncharacterized protein%3B~PFAM: Putative cell wall binding repeat 2%3B Leucine Rich Repeat%3B Iron Transport-associated domain gene gene1509 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1483 Sgly_1484 Sgly_1484 Sgly_1484 1499741 1500961 + Radical SAM domain protein COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase~InterPro IPR007197: IPR010723: IPR006638~KEGG: tle:Tlet_1247 coproporphyrinogen dehydrogenase~PFAM: Radical SAM%3B HemN%2C C-terminal~SMART: Elongator protein 3/MiaB/NifB~SPTR: Coproporphyrinogen dehydrogenase%3B~PFAM: Radical SAM superfamily%3B HemN C-terminal region gene gene1510 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1484 Sgly_1485 Sgly_1485 Sgly_1485 1500987 1501892 + NEAr transporter InterPro IPR006635~KEGG: spm:spyM18_1867 putative ABC transporter~PFAM: NEAr transporter~SPTR: Putative uncharacterized protein%3B~PFAM: Cell surface heme-binding protein Shp%3B Iron Transport-associated domain gene gene1511 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1485 Sgly_1486 Sgly_1486 Sgly_1486 1501923 1502840 + heme ABC transporter%2C heme-binding protein isdE COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component~InterPro IPR002491: IPR019957~KEGG: sez:Sez_0373 ferrichrome ABC transporter heme substrate-binding lipoprotein~PFAM: Periplasmic binding protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: ABC transporter%2C haem-binding protein IsdE~PFAM: Periplasmic binding protein~TIGRFAM: heme ABC transporter%2C heme-binding protein isdE gene gene1512 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1486 Sgly_1487 Sgly_1487 Sgly_1487 1502846 1503832 + transport system permease protein COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component~InterPro IPR000522~KEGG: pjd:Pjdr2_0794 transport system permease protein~PFAM: Bacterial transport system permease protein~SPTR: Putative uncharacterized protein%3B~PFAM: FecCD transport family gene gene1513 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1487 Sgly_1488 Sgly_1488 Sgly_1488 1503822 1504613 + Iron-chelate-transporting ATPase COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components~InterPro IPR003439: IPR003593~KEGG: sez:Sez_0375 heme ABC transporter ATP-binding protein~PFAM: ABC transporter-like~PRIAM: Iron-chelate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ABC transporter gene gene1514 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1488 Sgly_1489 Sgly_1489 Sgly_1489 1504610 1505455 + iron (metal) dependent repressor%2C DtxR family COGs: COG1321 Mn-dependent transcriptional regulator protein~InterPro IPR000835: IPR001367~KEGG: adg:Adeg_0633 iron (metal) dependent repressor%2C DtxR family~PFAM: HTH transcriptional regulator%2C MarR~SMART: Iron dependent repressor%3B HTH transcriptional regulator%2C MarR~SPTR: Predicted protein%3B~PFAM: Iron dependent repressor%2C N-terminal DNA binding domain gene gene1515 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1489 Sgly_1490 Sgly_1490 Sgly_1490 1505462 1505839 - iron (metal) dependent repressor%2C DtxR family COGs: COG1321 Mn-dependent transcriptional regulator protein~InterPro IPR001367~KEGG: dhd:Dhaf_1581 iron (metal) dependent repressor%2C DtxR family~PFAM: Iron dependent repressor~SMART: Iron dependent repressor~SPTR: Putative uncharacterized protein%3B~PFAM: Iron dependent repressor%2C metal binding and dimerisation domain%3B Iron dependent repressor%2C N-terminal DNA binding domain gene gene1516 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1490 Sgly_1491 Sgly_1491 Sgly_1491 1506005 1507627 - alkyl hydroperoxide reductase F subunit COGs: COG0492 Thioredoxin reductase~InterPro IPR013027: IPR017561~KEGG: dhd:Dhaf_0477 alkyl hydroperoxide reductase F subunit~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~PRIAM: Thioredoxin-disulfide reductase~SPTR: Alkyl hydroperoxide reductase F subunit%3B~TIGRFAM: Putative alkyl hydroperoxide reductase F subunit~PFAM: Pyridine nucleotide-disulphide oxidoreductase~TIGRFAM: putative alkyl hydroperoxide reductase F subunit%3B thioredoxin-disulfide reductase gene gene1517 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1491 Sgly_1492 Sgly_1492 Sgly_1492 1507633 1508196 - peroxiredoxin COGs: COG0450 Peroxiredoxin~InterPro IPR000866: IPR019479: IPR017559~KEGG: dhd:Dhaf_0476 peroxiredoxin~PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen%3B Peroxiredoxin%2C C-terminal~PRIAM: Peroxiredoxin~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Peroxiredoxin~PFAM: C-terminal domain of 1-Cys peroxiredoxin%3B AhpC/TSA family~TIGRFAM: peroxiredoxin gene gene1518 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1492 Sgly_1493 Sgly_1493 Sgly_1493 1508555 1509535 - transcriptional regulator%2C AraC family COGs: COG2207 AraC-type DNA-binding domain-containing protein~InterPro IPR000005: IPR018060~KEGG: cbi:CLJ_B1642 AraC family regulatory protein~PFAM: Helix-turn-helix%2C AraC type~SMART: Helix-turn-helix%2C AraC domain~SPTR: AraC family regulatory protein%3B~PFAM: Bacterial regulatory helix-turn-helix proteins%2C AraC family gene gene1519 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1493 Sgly_1494 Sgly_1494 Sgly_1494 1509613 1511640 - small GTP-binding protein COGs: COG0370 Fe2+ transport system protein B~InterPro IPR002917: IPR011619: IPR011642: IPR011640: IPR 005225~KEGG: ckr:CKR_1889 hypothetical protein~PFAM: GTP-binding protein%2C HSR1-related%3B Ferrous iron transport protein B%2C N-terminal%3B Nucleoside recognition%3B Ferrous iron transport protein B%2C C-terminal~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Small GTP-binding protein~PFAM: Ferrous iron transport protein B%3B Ferrous iron transport protein B C terminus%3B Nucleoside recognition~TIGRFAM: ferrous iron transporter FeoB%3B small GTP-binding protein domain gene gene1520 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1494 Sgly_1495 Sgly_1495 Sgly_1495 1511579 1511872 - FeoA family protein InterPro IPR007167~KEGG: ckr:CKR_1890 hypothetical protein~PFAM: Ferrous iron transporter%2C FeoA subunit~SPTR: Putative uncharacterized protein%3B~manually curated~PFAM: FeoA domain gene gene1521 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1495 Sgly_1496 Sgly_1496 Sgly_1496 1512022 1512522 - iron (metal) dependent repressor%2C DtxR family COGs: COG1321 Mn-dependent transcriptional regulator protein~InterPro IPR001367~KEGG: dhd:Dhaf_0029 iron dependent repressor~PFAM: Iron dependent repressor~SMART: Iron dependent repressor~SPTR: Putative uncharacterized protein%3B~PFAM: Iron dependent repressor%2C metal binding and dimerisation domain%3B Iron dependent repressor%2C N-terminal DNA binding domain gene gene1522 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1496 Sgly_1497 Sgly_1497 Sgly_1497 1512674 1513612 + periplasmic solute binding protein COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin~InterPro IPR006127~KEGG: dhd:Dhaf_0030 periplasmic solute binding protein~PFAM: ABC transporter metal-binding lipoprotein~SPTR: Periplasmic solute binding protein%3B~PFAM: Periplasmic solute binding protein family gene gene1523 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1497 Sgly_1498 Sgly_1498 Sgly_1498 1513630 1514394 + Phosphonate-transporting ATPase COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component~InterPro IPR003439: IPR003593~KEGG: dhd:Dhaf_0031 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Phosphonate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ABC transporter gene gene1524 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1498 Sgly_1499 Sgly_1499 Sgly_1499 1514396 1515319 + ABC-3 protein COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components~InterPro IPR001626~KEGG: dsy:DSY0094 hypothetical protein~PFAM: ABC-3~SPTR: Putative uncharacterized protein%3B~PFAM: ABC 3 transport family gene gene1525 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1499 Sgly_1500 Sgly_1500 Sgly_1500 1515303 1516412 + ABC-3 protein COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components~InterPro IPR001626~KEGG: dhd:Dhaf_0033 ABC-3 protein~PFAM: ABC-3~SPTR: ABC-3 protein%3B~PFAM: ABC 3 transport family gene gene1526 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1500 Sgly_1501 Sgly_1501 Sgly_1501 1516689 1518215 + cell wall binding repeat 2-containing protein COGs: COG2247 Putative cell wall-binding domain~InterPro IPR007253: IPR003709~KEGG: dhd:Dhaf_4160 putative cell wall binding repeat 2-containing protein~PFAM: Putative cell wall binding repeat 2%3B Peptidase M15B/M15C%2C D%2CD-carboxypeptidase VanY/endolysins~SPTR: Putative cell wall binding repeat 2-containing protein%3B~PFAM: Putative cell wall binding repeat 2 gene gene1527 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1501 Sgly_1502 Sgly_1502 Sgly_1502 1518377 1520044 + diguanylate cyclase and metal dependent phosphohydrolase COGs: COG2206 HD-GYP domain~InterPro IPR000160: IPR006674: IPR003607~KEGG: dtu:Dtur_0210 diguanylate cyclase and metal dependent phosphohydrolase~PFAM: Diguanylate cyclase%2C predicted%3B Metal-dependent phosphohydrolase%2C HD subdomain~SMART: Diguanylate cyclase%2C predicted%3B Metal-dependent phosphohydrolase%2C HD domain~SPTR: Diguanylate cyclase and metal dependent phosphohydrolase%3B~TIGRFAM: Diguanylate cyclase%2C predicted~PFAM: HD domain%3B GGDEF domain~TIGRFAM: diguanylate cyclase (GGDEF) domain gene gene1528 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1502 Sgly_1503 Sgly_1503 Sgly_1503 1520041 1520760 - PHP domain protein COGs: COG4464 Capsular polysaccharide biosynthesis protein~InterPro IPR004013~KEGG: cbh:CLC_2561 exopolysaccharide biosynthesis protein~PFAM: PHP%2C C-terminal~SPTR: Putative uncharacterized protein gene gene1529 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1503 Sgly_1504 Sgly_1504 Sgly_1504 1520819 1521541 - capsular exopolysaccharide family COGs: COG0489 ATPase involved in chromosome partitioning~InterPro IPR005702~KEGG: cpe:CPE0492 capsular polysaccharide biosynthsis protein~PRIAM: Non-specific protein-tyrosine kinase~SPTR: Capsular exopolysaccharide family%3B~TIGRFAM: Exopolysaccharide synthesis protein~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain~TIGRFAM: capsular exopolysaccharide family gene gene1530 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1504 Sgly_1505 Sgly_1505 Sgly_1505 1521538 1522293 - lipopolysaccharide biosynthesis protein COGs: COG3944 Capsular polysaccharide biosynthesis protein~InterPro IPR003856~KEGG: tte:TTE0733 capsular polysaccharide biosynthesis homolog YwqC~PFAM: Lipopolysaccharide biosynthesis~SPTR: Putative uncharacterized protein%3B~PFAM: Chain length determinant protein gene gene1531 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1505 Sgly_1506 Sgly_1506 Sgly_1506 1522406 1522549 + hypothetical protein gene gene1532 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1506 Sgly_1507 Sgly_1507 Sgly_1507 1522579 1523604 - UDP-glucose 4-epimerase COGs: COG1087 UDP-glucose 4-epimerase~InterPro IPR001509: IPR005886~KEGG: eel:EUBELI_00151 UDP-glucose 4-epimerase~PFAM: NAD-dependent epimerase/dehydratase~PRIAM: UDP-glucose 4-epimerase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: UDP-glucose 4-epimerase~PFAM: NAD dependent epimerase/dehydratase family~TIGRFAM: UDP-glucose-4-epimerase gene gene1533 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1507 Sgly_1508 Sgly_1508 Sgly_1508 1523654 1524811 - coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein InterPro IPR007525~KEGG: amt:Amet_0212 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein~PFAM: Coenzyme F420 hydrogenase/dehydrogenase beta subunit%2C C-terminal~SPTR: Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (Chain I)%3B~PFAM: Coenzyme F420 hydrogenase/dehydrogenase%2C beta subunit C terminus gene gene1534 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1508 Sgly_1509 Sgly_1509 Sgly_1509 1524789 1526330 - polysaccharide transport protein%2C putative KEGG: bca:BCE_5386 polysaccharide transport protein%2C putative~SPTR: Putative uncharacterized protein gene gene1535 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1509 Sgly_1510 Sgly_1510 Sgly_1510 1526327 1527418 - hypothetical protein KEGG: amt:Amet_0211 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Polysaccharide pyruvyl transferase gene gene1536 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1510 Sgly_1511 Sgly_1511 Sgly_1511 1527426 1528781 - hypothetical protein KEGG: sca:Sca_2352 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1537 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1511 Sgly_1512 Sgly_1512 Sgly_1512 1528819 1530006 - glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: cpe:CPE0486 galactosyl transferase~PFAM: Glycosyl transferase%2C group 1~SPTR: Putative uncharacterized protein%3B~PFAM: Glycosyl transferases group 1 gene gene1538 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1512 Sgly_1513 Sgly_1513 Sgly_1513 1530041 1531135 - hypothetical protein KEGG: fjo:Fjoh_0344 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1539 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1513 Sgly_1514 Sgly_1514 Sgly_1514 1531200 1532381 - glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: gpb:HDN1F_06110 putative glycosyltransferase~PFAM: Glycosyl transferase%2C group 1~SPTR: Glycosyl transferase%2C group 1%3B~manually curated~PFAM: Glycosyl transferases group 1 gene gene1540 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1514 Sgly_1515 Sgly_1515 Sgly_1515 1532388 1533113 - Undecaprenyl-phosphate galactose phosphotransferase COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis~InterPro IPR003362~KEGG: bcb:BCB4264_A5394 glucosyltransferase EpsB~PFAM: Bacterial sugar transferase~PRIAM: Undecaprenyl-phosphate galactose phosphotransferase~SPTR: Glucosyltransferase EpsB%3B~PFAM: Bacterial sugar transferase gene gene1541 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1515 Sgly_1516 Sgly_1516 Sgly_1516 1533135 1533803 - sugar isomerase (SIS) COGs: COG0279 Phosphoheptose isomerase~InterPro IPR001347~KEGG: ssm:Spirs_3065 sugar isomerase (SIS)~PFAM: Sugar isomerase (SIS)~SPTR: Putative uncharacterized protein%3B~PFAM: SIS domain gene gene1542 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1516 Sgly_1517 Sgly_1517 Sgly_1517 1533820 1535109 - histidinol-phosphate phosphatase family protein COGs: COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)~InterPro IPR005835: IPR005834: IPR006543: IPR006549~KEGG: hde:HDEF_0187 hypothetical protein~PFAM: Nucleotidyl transferase%3B Haloacid dehalogenase-like hydrolase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Histidinol-phosphate phosphatase%3B HAD-superfamily hydrolase%2C subfamily IIIA~PFAM: Nucleotidyl transferase%3B haloacid dehalogenase-like hydrolase~TIGRFAM: HAD-superfamily hydrolase%2C subfamily IIIA%3B D%2CD-heptose 1%2C7-bisphosphate phosphatase%3B histidinol-phosphate phosphatase family domain gene gene1543 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1517 Sgly_1518 Sgly_1518 Sgly_1518 1535123 1536136 - GHMP kinase COGs: COG2605 kinase related to galactokinase and mevalonate kinase~InterPro IPR006204: IPR013750~KEGG: mpi:Mpet_1390 GHMP kinase~PFAM: GHMP kinase%3B GHMP kinase%2C C-terminal~SPTR: Predicted kinase related to galactokinase and mevalonate kinase%3B~PFAM: GHMP kinases C terminal%3B GHMP kinases N terminal domain gene gene1544 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1518 Sgly_1519 Sgly_1519 Sgly_1519 1536274 1536771 - hypothetical protein KEGG: ame:408577 phosphotidylinositol 3 kinase 21B ortholog~SPTR: DNA-binding response regulator (Contains REC and AraC-type DNA-binding domain) gene gene1545 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1519 Sgly_1520 Sgly_1520 Sgly_1520 1536927 1538063 - integrase family protein COGs: COG4974 Site-specific recombinase XerD~InterPro IPR002104~KEGG: efa:EF2255 phage integrase family site specific recombinase~PFAM: Integrase%2C catalytic core%2C phage~SPTR: Integrase family protein%3B~PFAM: Phage integrase family gene gene1546 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1520 Sgly_1521 Sgly_1521 Sgly_1521 1538374 1540728 - cadmium-translocating P-type ATPase COGs: COG2217 Cation transport ATPase~InterPro IPR006121: IPR008250: IPR005834: IPR006404: IPR 006416: IPR001757~KEGG: dsy:DSY0829 hypothetical protein~PFAM: ATPase%2C P-type%2C ATPase-associated domain%3B Heavy metal transport/detoxification protein%3B Haloacid dehalogenase-like hydrolase~PRIAM: Cadmium-exporting ATPase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: ATPase%2C P-type%2C heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating%3B ATPase%2C P-type%2C heavy metal translocating%3B ATPase%2C P-type%2C K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter~PFAM: E1-E2 ATPase%3B Heavy-metal-associated domain%3B haloacid dehalogenase-like hydrolase~TIGRFAM: heavy metal translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC%3B heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase gene gene1547 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1521 Sgly_1522 Sgly_1522 Sgly_1522 1540861 1541238 - transcriptional regulator%2C ArsR family COGs: COG0640 transcriptional regulator protein~InterPro IPR001845~KEGG: dhd:Dhaf_0925 transcriptional regulator%2C ArsR family~PFAM: HTH transcriptional regulator%2C ArsR~SMART: HTH transcriptional regulator%2C ArsR~SPTR: Putative uncharacterized protein%3B~PFAM: Bacterial regulatory protein%2C arsR family gene gene1548 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1522 Sgly_1523 Sgly_1523 Sgly_1523 1541505 1545008 + cell wall binding repeat 2-containing protein COGs: COG2247 Putative cell wall-binding domain~InterPro IPR013378: IPR007253~KEGG: dsy:DSY3854 hypothetical protein~PFAM: Putative cell wall binding repeat 2%3B Listeria/Bacterioides repeat~SPTR: Putative uncharacterized protein%3B~PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt)%3B Putative cell wall binding repeat 2~TIGRFAM: Listeria/Bacterioides repeat gene gene1549 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1523 Sgly_1524 Sgly_1524 Sgly_1524 1545103 1545705 - regulatory protein TetR InterPro IPR001647~KEGG: cac:CA_C0724 AcrR family transcriptional regulator~PFAM: Transcription regulator%2C TetR-like%2C DNA-binding%2C bacterial/archaeal~SPTR: Transcriptional regulator%2C AcrR family%3B~PFAM: Bacterial regulatory proteins%2C tetR family gene gene1550 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1524 Sgly_1525 Sgly_1525 Sgly_1525 1545977 1546447 + methylated-DNA/protein-cysteinemethyltransferase COGs: COG0350 Methylated DNA-protein cysteine methyltransferase~InterPro IPR014048~KEGG: dds:Ddes_1160 methylated-DNA/protein-cysteine methyltransferase~PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase%2C DNA binding~SPTR: Methylated-DNA/protein-cysteine methyltransferase%3B~TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase%2C DNA binding~PFAM: 6-O-methylguanine DNA methyltransferase%2C DNA binding domain~TIGRFAM: O-6-methylguanine DNA methyltransferase gene gene1551 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1525 Sgly_1526 Sgly_1526 Sgly_1526 1546440 1547135 + DNA-3-methyladenine glycosylase II COGs: COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase~InterPro IPR003265~KEGG: dds:Ddes_1159 HhH-GPD family protein~PFAM: HhH-GPD domain~SMART: HhH-GPD domain~SPTR: HhH-GPD family protein%3B~PFAM: HhH-GPD superfamily base excision DNA repair protein gene gene1552 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1526 Sgly_1527 Sgly_1527 Sgly_1527 1547318 1547857 + CDP-alcohol phosphatidyltransferase InterPro IPR000462~KEGG: aoe:Clos_2686 CDP-alcohol phosphatidyltransferase~PFAM: CDP-alcohol phosphatidyltransferase~SPTR: CDP-alcohol phosphatidyltransferase%3B~PFAM: CDP-alcohol phosphatidyltransferase gene gene1553 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1527 Sgly_1528 Sgly_1528 Sgly_1528 1547860 1547973 - pseudogene gene1554 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1528 Sgly_1529 Sgly_1529 Sgly_1529 1547973 1548236 - transcriptional regulator%2C AbrB family InterPro IPR007159: IPR006339~KEGG: dsy:DSY3864 hypothetical protein~PFAM: Transcription regulator AbrB/SpoV%2C predicted~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Transcription regulator AbrB~PFAM: SpoVT / AbrB like domain~TIGRFAM: looped-hinge helix DNA binding domain%2C AbrB family gene gene1555 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1529 Sgly_1530 Sgly_1530 Sgly_1530 1548599 1548814 + FeoA family protein InterPro IPR007167~KEGG: aoe:Clos_2715 FeoA family protein~PFAM: Ferrous iron transporter%2C FeoA subunit~SPTR: Putative uncharacterized protein%3B~PFAM: FeoA domain gene gene1556 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1530 Sgly_1531 Sgly_1531 Sgly_1531 1548965 1550977 + ferrous iron transport protein B COGs: COG0370 Fe2+ transport system protein B~InterPro IPR002917: IPR011619: IPR011642: IPR011640: IPR 003373~KEGG: ppr:PBPRB1904 ferrous ion transport protein B~PFAM: GTP-binding protein%2C HSR1-related%3B Ferrous iron transport protein B%2C N-terminal%3B Nucleoside recognition%3B Ferrous iron transport protein B%2C C-terminal~SPTR: Hypothetical ferrous ion transport protein B%3B~TIGRFAM: Ferrous iron transport protein B~PFAM: Ferrous iron transport protein B%3B Ferrous iron transport protein B C terminus%3B Nucleoside recognition~TIGRFAM: ferrous iron transporter FeoB%3B small GTP-binding protein domain gene gene1557 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1531 Sgly_1532 Sgly_1532 Sgly_1532 1550974 1551120 + hypothetical protein KEGG: cdl:CDR20291_1329 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1558 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1532 Sgly_1533 Sgly_1533 Sgly_1533 1551332 1551577 + hypothetical protein KEGG: dhd:Dhaf_4765 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1559 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1533 Sgly_1534 Sgly_1534 Sgly_1534 1551652 1553391 - Xenobiotic-transporting ATPase COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterPro IPR001140: IPR003439: IPR003593~KEGG: cac:CA_C2392 ABC transporter ATPase~PFAM: ABC transporter-like%3B ABC transporter%2C transmembrane domain~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ABC transporter%3B ABC transporter transmembrane region gene gene1560 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1534 Sgly_1535 Sgly_1535 Sgly_1535 1553388 1555118 - Xenobiotic-transporting ATPase COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterPro IPR001140: IPR003439: IPR003593~KEGG: cac:CA_C2393 ABC transporter ATPase~PFAM: ABC transporter-like%3B ABC transporter%2C transmembrane domain~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ABC transporter%3B ABC transporter transmembrane region gene gene1561 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1535 Sgly_1536 Sgly_1536 Sgly_1536 1555344 1556210 + transcriptional regulator%2C LysR family COGs: COG0583 Transcriptional regulator~InterPro IPR000847: IPR005119~KEGG: cac:CA_C2394 LysR family transcriptional regulator~PFAM: LysR%2C substrate-binding%3B HTH transcriptional regulator%2C LysR~SPTR: Transcriptional regulator%3B~PFAM: Bacterial regulatory helix-turn-helix protein%2C lysR family%3B LysR substrate binding domain gene gene1562 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1536 Sgly_1537 Sgly_1537 Sgly_1537 1556642 1557853 + cyclopropane-fatty-acyl-phospholipid synthase COGs: COG2230 Cyclopropane fatty acid synthase and related methyltransferase~InterPro IPR003333~KEGG: ckr:CKR_2194 hypothetical protein~PFAM: Cyclopropane-fatty-acyl-phospholipid synthase~PRIAM: Cyclopropane-fatty-acyl-phospholipid synthase~SPTR: Putative uncharacterized protein%3B~PFAM: Cyclopropane-fatty-acyl-phospholipid synthase gene gene1563 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1537 Sgly_1538 Sgly_1538 Sgly_1538 1558125 1558940 + binding-protein-dependent transport systems inner membrane component COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component~InterPro IPR000515~KEGG: geo:Geob_1660 binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Binding-protein-dependent transport systems inner membrane component%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1564 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1538 Sgly_1539 Sgly_1539 Sgly_1539 1558954 1559742 + Taurine-transporting ATPase COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component~InterPro IPR003439: IPR003593~KEGG: clj:CLJU_c18320 putative nitrate/sulfonate/bicarbonate ABC transporter ATPase~PFAM: ABC transporter-like~PRIAM: Taurine-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Predicted ABC nitrate/sulfonate/bicarbonate family transporter%2C ATPase component%3B~PFAM: ABC transporter gene gene1565 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1539 Sgly_1540 Sgly_1540 Sgly_1540 1559771 1560115 + Protein of unknown function DUF2294 InterPro IPR018745~KEGG: eat:EAT1b_1381 hypothetical protein~PFAM: Protein of unknown function DUF2294~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterized conserved protein (DUF2294) gene gene1566 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1540 Sgly_1541 Sgly_1541 Sgly_1541 1560239 1561495 + hypothetical protein KEGG: geo:Geob_1657 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1567 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1541 Sgly_1542 Sgly_1542 Sgly_1542 1561589 1562080 + hypothetical protein KEGG: geo:Geob_1658 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1568 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1542 Sgly_1543 Sgly_1543 Sgly_1543 1562085 1563095 + aliphatic sulfonates family ABC transporter%2C periplasmic ligand-binding protein COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components~InterPro IPR010067: IPR001638~KEGG: geo:Geob_1659 aliphatic sulfonates family ABC transporter%2C periplsmic ligand-binding protein~SMART: Extracellular solute-binding protein%2C family 3~SPTR: Aliphatic sulfonates family ABC transporter%2C periplsmic ligand-binding protein%3B~TIGRFAM: ABC transporter%2C substrate-binding protein%2C aliphatic sulphonates~PFAM: NMT1/THI5 like~TIGRFAM: ABC transporter%2C substrate-binding protein%2C aliphatic sulfonates family gene gene1569 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1543 Sgly_1544 Sgly_1544 Sgly_1544 1563134 1564498 + Radical SAM domain protein COGs: COG1032 Fe-S oxidoreductase~InterPro IPR006158: IPR007197: IPR006638~KEGG: geo:Geob_1662 radical SAM domain protein~PFAM: Radical SAM%3B Cobalamin (vitamin B12)-binding~SMART: Elongator protein 3/MiaB/NifB~SPTR: Radical SAM domain protein%3B~PFAM: Radical SAM superfamily%3B B12 binding domain gene gene1570 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1544 Sgly_1545 Sgly_1545 Sgly_1545 1564528 1565730 + methionine adenosyltransferase COGs: COG0192 S-adenosylmethionine synthetase~HAMAP: S-adenosylmethionine synthetase~InterPro IPR002133~KEGG: cth:Cthe_2251 methionine adenosyltransferase~PFAM: S-adenosylmethionine synthetase~PRIAM: Methionine adenosyltransferase~SPTR: S-adenosylmethionine synthase%3B~TIGRFAM: S-adenosylmethionine synthetase~PFAM: S-adenosylmethionine synthetase%2C C-terminal domain%3B S-adenosylmethionine synthetase%2C N-terminal domain%3B S-adenosylmethionine synthetase%2C central domain~TIGRFAM: S-adenosylmethionine synthetase gene gene1571 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1545 Sgly_1546 Sgly_1546 Sgly_1546 1566166 1566612 + transcriptional regulator%2C MerR family COGs: COG0789 transcriptional regulator protein~InterPro IPR000551~KEGG: ckr:CKR_2195 hypothetical protein~PFAM: HTH transcriptional regulator%2C MerR~SMART: HTH transcriptional regulator%2C MerR~SPTR: Putative uncharacterized protein%3B~PFAM: MerR family regulatory protein gene gene1572 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1546 Sgly_1547 Sgly_1547 Sgly_1547 1566660 1568351 + major facilitator superfamily MFS_1 InterPro IPR011701~KEGG: ckr:CKR_0064 hypothetical protein~PFAM: Major facilitator superfamily MFS-1~SPTR: Putative uncharacterized protein%3B~PFAM: Major Facilitator Superfamily~TIGRFAM: drug resistance transporter%2C EmrB/QacA subfamily gene gene1573 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1547 Sgly_1548 Sgly_1548 Sgly_1548 1568417 1569265 + protein of unknown function DUF610 YibQ COGs: COG2861 conserved hypothetical protein~InterPro IPR006837~KEGG: amt:Amet_4438 protein of unknown function DUF610%2C YibQ~PFAM: Protein of unknown function DUF610%2C YibQ~SPTR: Putative uncharacterized protein%3B~PFAM: Divergent polysaccharide deacetylase gene gene1574 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1548 Sgly_1549 Sgly_1549 Sgly_1549 1569442 1570017 + hypothetical protein KEGG: dhd:Dhaf_4684 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1575 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1549 Sgly_1550 Sgly_1550 Sgly_1550 1570116 1571192 + glycosyl transferase family 2 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis~InterPro IPR001173~KEGG: amt:Amet_3406 glycosyl transferase family protein~PFAM: Glycosyl transferase%2C family 2~SPTR: Glycosyl transferase%2C family 2%3B~PFAM: Glycosyl transferase family 2 gene gene1576 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1550 Sgly_1551 Sgly_1551 Sgly_1551 1571551 1572000 - hypothetical protein InterPro IPR014874~KEGG: bvu:BVU_0933 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1577 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1551 Sgly_1552 Sgly_1552 Sgly_1552 1572011 1573003 - glycosyl transferase family 2 InterPro IPR001173~KEGG: cbl:CLK_1507 hypothetical protein~PFAM: Glycosyl transferase%2C family 2~SPTR: Putative uncharacterized protein%3B~PFAM: Glycosyl transferase family 2 gene gene1578 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1552 Sgly_1553 Sgly_1553 Sgly_1553 1573040 1574176 - DegT/DnrJ/EryC1/StrS aminotransferase COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis~InterPro IPR000653~KEGG: cby:CLM_2269 aminotransferase%2C DegT/DnrJ/EryC1/StrS family~PFAM: DegT/DnrJ/EryC1/StrS aminotransferase~SPTR: Aminotransferase%2C DegT/DnrJ/EryC1/StrS family%3B~PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family gene gene1579 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1553 Sgly_1554 Sgly_1554 Sgly_1554 1574452 1575516 + glucose-1-phosphate thymidyltransferase COGs: COG1209 dTDP-glucose pyrophosphorylase~InterPro IPR005835: IPR005908~KEGG: cbl:CLK_1511 glucose-1-phosphate thymidylyltransferase~PFAM: Nucleotidyl transferase~PRIAM: Glucose-1-phosphate thymidylyltransferase~SPTR: Glucose-1-phosphate thymidylyltransferase%3B~TIGRFAM: Glucose-1-phosphate thymidylyltransferase%2C short form~PFAM: Nucleotidyl transferase~TIGRFAM: glucose-1-phosphate thymidylylransferase%2C long form gene gene1580 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1554 Sgly_1555 Sgly_1555 Sgly_1555 1575557 1576540 + dTDP-glucose 4%2C6-dehydratase COGs: COG1088 dTDP-D-glucose 4 6-dehydratase~InterPro IPR001509: IPR005888~KEGG: cbh:CLC_2000 dTDP-glucose 4%2C6-dehydratase~PFAM: NAD-dependent epimerase/dehydratase~PRIAM: dTDP-glucose 4%2C6-dehydratase~SPTR: dTDP-glucose 4%2C6-dehydratase%3B~TIGRFAM: dTDP-glucose 4%2C6-dehydratase~PFAM: NAD dependent epimerase/dehydratase family~TIGRFAM: dTDP-glucose 4%2C6-dehydratase gene gene1581 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1555 Sgly_1556 Sgly_1556 Sgly_1556 1576721 1576945 - hypothetical protein KEGG: nvi:100117034 similar to NFX1-type zinc finger-containing protein 1~SPTR: LPXTG-motif cell wall anchor domain protein gene gene1582 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1556 Sgly_1557 Sgly_1557 Sgly_1557 1577284 1578183 + glycosyl transferase family 2 COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis~InterPro IPR001173~KEGG: cby:CLM_2267 hypothetical protein~PFAM: Glycosyl transferase%2C family 2~SPTR: Putative uncharacterized protein%3B~PFAM: Glycosyl transferase family 2 gene gene1583 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1557 Sgly_1558 Sgly_1558 Sgly_1558 1578230 1578883 + sugar O-acyltransferase%2C sialic acid O-acetyltransferase NeuD family COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl)~InterPro IPR001451: IPR020019~KEGG: tte:TTE0666 acetyltransferase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Sialic acid O-acyltransferase%2C NeuD~TIGRFAM: sugar O-acyltransferase%2C sialic acid O-acetyltransferase NeuD family gene gene1584 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1558 Sgly_1559 Sgly_1559 Sgly_1559 1579001 1579228 - acyl carrier protein KEGG: cac:CA_C2198 acyl carrier protein~SPTR: Acyl carrier protein%3B~PFAM: Phosphopantetheine attachment site gene gene1585 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1559 Sgly_1560 Sgly_1560 Sgly_1560 1579230 1580948 - FkbH like protein COGs: COG3882 protein involved in methoxymalonyl-ACP biosynthesis~InterPro IPR010037: IPR010033~KEGG: cac:CA_C2199 hypothetical protein~SPTR: Uncharacterized protein%2C homolog of Cj1302 C.jejuni%3B~TIGRFAM: FkbH%3B HAD-superfamily phosphatase%2C subfamily IIIC~PFAM: NLI interacting factor-like phosphatase~TIGRFAM: FkbH-like domain%3B HAD-superfamily phosphatase%2C subfamily IIIC gene gene1586 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1560 Sgly_1561 Sgly_1561 Sgly_1561 1580948 1581679 - 3-oxoacyl-(acyl-carrier-protein) reductase COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)~InterPro IPR002198~KEGG: bpt:Bpet3787 putative short chain dehydrogenase~PFAM: Short-chain dehydrogenase/reductase SDR~PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase~SPTR: Putative short chain dehydrogenase%3B~PFAM: short chain dehydrogenase gene gene1587 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1561 Sgly_1562 Sgly_1562 Sgly_1562 1581698 1582126 - MaoC domain protein dehydratase COGs: COG2030 Acyl dehydratase~InterPro IPR002539~KEGG: bca:BCE_1425 MaoC family protein~PFAM: MaoC-like dehydratase~SPTR: MaoC domain protein dehydratase%3B~PFAM: MaoC like domain gene gene1588 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1562 Sgly_1563 Sgly_1563 Sgly_1563 1582323 1583225 - hypothetical protein KEGG: ccb:Clocel_1217 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1589 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1563 Sgly_1564 Sgly_1564 Sgly_1564 1583406 1583564 - hypothetical protein KEGG: gem:GM21_2459 O-antigen polymerase~SPTR: O-antigen polymerase gene gene1590 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1564 Sgly_1565 Sgly_1565 Sgly_1565 1583805 1584701 + glycosyl transferase family 2 COGs: COG1216 glycosyltransferase~InterPro IPR001173~KEGG: cbi:CLJ_B2268 hypothetical protein~PFAM: Glycosyl transferase%2C family 2~SPTR: Putative uncharacterized protein%3B~PFAM: Glycosyl transferase family 2 gene gene1591 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1565 Sgly_1566 Sgly_1566 Sgly_1566 1584854 1585510 + sugar O-acyltransferase%2C sialic acid O-acetyltransferase NeuD family COGs: COG1045 Serine acetyltransferase~InterPro IPR001451: IPR020019~KEGG: cbh:CLC_1996 hexapeptide repeat-containing transferase~SPTR: Bacterial transferase%2C hexapeptide repeat family%3B~TIGRFAM: Sialic acid O-acyltransferase%2C NeuD~TIGRFAM: sugar O-acyltransferase%2C sialic acid O-acetyltransferase NeuD family gene gene1592 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1566 Sgly_1567 Sgly_1567 Sgly_1567 1585543 1586682 + glycosyl transferase family 2 InterPro IPR001173~KEGG: cby:CLM_2267 hypothetical protein~PFAM: Glycosyl transferase%2C family 2~SPTR: Putative uncharacterized protein%3B~PFAM: Glycosyl transferase family 2 gene gene1593 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1567 Sgly_1568 Sgly_1568 Sgly_1568 1586857 1587987 + hypothetical protein KEGG: cth:Cthe_1430 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1594 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1568 Sgly_1569 Sgly_1569 Sgly_1569 1588178 1588471 - helix-turn-helix domain protein InterPro IPR001387~KEGG: cdf:CD0509 putative conjugative transposon regulatory protein~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3~SPTR: Putative uncharacterized protein%3B~PFAM: Helix-turn-helix gene gene1595 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1569 Sgly_1570 Sgly_1570 Sgly_1570 1588513 1589121 - transcriptional regulator%2C TetR family COGs: COG1309 Transcriptional regulator~InterPro IPR001647~KEGG: lsg:lse_1018 transcriptional regulator%2C TetR family~PFAM: Transcription regulator%2C TetR-like%2C DNA-binding%2C bacterial/archaeal~SPTR: Hypothetical transcriptional regulator%3B~PFAM: Bacterial regulatory proteins%2C tetR family gene gene1596 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1570 Sgly_1571 Sgly_1571 Sgly_1571 1589278 1590378 + hypothetical protein KEGG: nml:Namu_0614 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Metallo-beta-lactamase superfamily gene gene1597 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1571 Sgly_1572 Sgly_1572 Sgly_1572 1590852 1591089 + pseudogene gene1598 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1572 Sgly_1573 Sgly_1573 Sgly_1573 1591120 1591279 + pseudogene gene1599 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1573 Sgly_1574 Sgly_1574 Sgly_1574 1591690 1593984 + Collagen triple helix repeat-containing protein InterPro IPR008160~KEGG: cbe:Cbei_2587 triple helix repeat-containing collagen~PFAM: Collagen triple helix repeat~SPTR: Collagen triple helix repeat%3B~PFAM: Collagen triple helix repeat (20 copies) gene gene1600 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1574 Sgly_1575 Sgly_1575 Sgly_1575 1594153 1594767 + regulatory protein TetR InterPro IPR001647~KEGG: dhd:Dhaf_4031 transcriptional regulator%2C TetR family~PFAM: Transcription regulator%2C TetR-like%2C DNA-binding%2C bacterial/archaeal~SPTR: Putative uncharacterized protein%3B~PFAM: Bacterial regulatory proteins%2C tetR family gene gene1601 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1575 Sgly_1576 Sgly_1576 Sgly_1576 1594828 1596585 + Xenobiotic-transporting ATPase COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterPro IPR001140: IPR003439: IPR003593~KEGG: ele:Elen_0316 ABC transporter related~PFAM: ABC transporter-like%3B ABC transporter%2C transmembrane domain~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ABC transporter transmembrane region%3B ABC transporter gene gene1602 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1576 Sgly_1577 Sgly_1577 Sgly_1577 1596587 1598311 + Xenobiotic-transporting ATPase COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterPro IPR003439: IPR003593~KEGG: tde:TDE1599 ABC transporter%2C ATP-binding/permease protein~PFAM: ABC transporter-like~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ABC transporter transmembrane region%3B ABC transporter gene gene1603 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1577 Sgly_1578 Sgly_1578 Sgly_1578 1598578 1598961 + iron (metal) dependent repressor%2C DtxR family COGs: COG1321 Mn-dependent transcriptional regulator protein~InterPro IPR001367~KEGG: dhd:Dhaf_1581 iron (metal) dependent repressor%2C DtxR family~PFAM: Iron dependent repressor~SMART: Iron dependent repressor~SPTR: Iron (Metal) dependent repressor%2C DtxR family%3B~PFAM: Iron dependent repressor%2C metal binding and dimerisation domain%3B Iron dependent repressor%2C N-terminal DNA binding domain gene gene1604 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1578 Sgly_1579 Sgly_1579 Sgly_1579 1599237 1601093 + hypothetical protein KEGG: dae:Dtox_1898 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1605 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1579 Sgly_1580 Sgly_1580 Sgly_1580 1601260 1602843 + FAD dependent oxidoreductase COGs: COG0665 Glycine/D-amino acid oxidase (deaminating)~InterPro IPR006076: IPR017941~KEGG: cth:Cthe_1461 FAD dependent oxidoreductase~PFAM: FAD dependent oxidoreductase%3B Rieske [2Fe-2S] iron-sulphur domain~SPTR: FAD dependent oxidoreductase%3B~PFAM: Rieske [2Fe-2S] domain%3B FAD dependent oxidoreductase gene gene1606 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1580 Sgly_1581 Sgly_1581 Sgly_1581 1603149 1604027 + cation diffusion facilitator family transporter COGs: COG0053 Co/Zn/Cd cation transporter~InterPro IPR002524~KEGG: ccb:Clocel_2942 cation diffusion facilitator family transporter~PFAM: Cation efflux protein~SPTR: Cation diffusion facilitator family transporter%3B~TIGRFAM: Cation efflux protein~PFAM: Cation efflux family~TIGRFAM: cation diffusion facilitator family transporter gene gene1607 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1581 Sgly_1582 Sgly_1582 Sgly_1582 1604143 1604676 + hypothetical protein KEGG: swo:Swol_0570 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1608 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1582 Sgly_1583 Sgly_1583 Sgly_1583 1604689 1606227 - glycosyl transferase family 2 InterPro IPR001173~KEGG: bmq:BMQ_pBM50075 glycosyl transferase%2C group 2 family protein~PFAM: Glycosyl transferase%2C family 2~SPTR: Glycosyl transferase%2C group 2 family protein%3B~PFAM: Glycosyl transferase family 2 gene gene1609 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1583 Sgly_1584 Sgly_1584 Sgly_1584 1606425 1607489 + diguanylate cyclase COGs: COG2199 FOG: GGDEF domain~InterPro IPR000160~KEGG: bse:Bsel_2945 diguanylate cyclase~PFAM: Diguanylate cyclase%2C predicted~SMART: Diguanylate cyclase%2C predicted~SPTR: Diguanylate cyclase%3B~TIGRFAM: Diguanylate cyclase%2C predicted~PFAM: GGDEF domain~TIGRFAM: diguanylate cyclase (GGDEF) domain gene gene1610 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1584 Sgly_1585 Sgly_1585 Sgly_1585 1607486 1609309 - amino acid/polyamine/organocation transporter%2C APC superfamily COGs: COG0531 Amino acid transporter~KEGG: tjr:TherJR_2465 hypothetical protein~SPTR: Putative uncharacterized protein%3B (TC 2.A.3 gene gene1611 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1585 Sgly_1586 Sgly_1586 Sgly_1586 1609887 1610405 + phosphoesterase PA-phosphatase related protein InterPro IPR000326~KEGG: tit:Thit_2198 phosphoesterase PA-phosphatase related protein~PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase~SMART: Phosphatidic acid phosphatase type 2/haloperoxidase~SPTR: Phosphoesterase PA-phosphatase related protein%3B~PFAM: PAP2 superfamily gene gene1612 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1586 Sgly_1587 Sgly_1587 Sgly_1587 1610529 1611155 + Lysine exporter protein (LYSE/YGGA) COGs: COG1280 Putative threonine efflux protein~InterPro IPR001123~KEGG: ppd:Ppro_1992 lysine exporter protein LysE/YggA~PFAM: Lysine exporter protein (LYSE/YGGA)~SPTR: Lysine exporter protein (LYSE/YGGA)%3B~PFAM: LysE type translocator gene gene1613 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1587 Sgly_1588 Sgly_1588 Sgly_1588 1611225 1612097 + Radical SAM domain protein COGs: COG1180 Pyruvate-formate lyase-activating enzyme~InterPro IPR007197~KEGG: tye:THEYE_A0925 MoaA/NifB/PqqE family protein~PFAM: Radical SAM~SPTR: MoaA/nifB/pqqE family protein%3B~PFAM: Radical SAM superfamily gene gene1614 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1588 Sgly_1589 Sgly_1589 Sgly_1589 1612150 1613028 + Polyphosphate:AMP phosphotransferase COGs: COG2326 conserved hypothetical protein~InterPro IPR005660~KEGG: str:Sterm_1928 protein of unknown function DUF344~PFAM: Polyphosphate kinase 2~SPTR: Putative uncharacterized protein%3B~TIGRFAM: polyphosphate:nucleotide phosphotransferase%2C PPK2 family~PFAM: Polyphosphate kinase 2 (PPK2)~TIGRFAM: polyphosphate:nucleotide phosphotransferase%2C PPK2 family gene gene1615 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1589 Sgly_1590 Sgly_1590 Sgly_1590 1613133 1613702 + LemA family protein COGs: COG1704 conserved hypothetical protein~InterPro IPR007156~KEGG: dhd:Dhaf_0874 LemA family protein~PFAM: LemA~SPTR: Putative uncharacterized protein%3B~PFAM: LemA family gene gene1616 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1590 Sgly_1591 Sgly_1591 Sgly_1591 1613729 1614499 + protein of unknown function DUF477 COGs: COG1512 Beta-propeller domains of methanol dehydrogenase type~InterPro IPR007621~KEGG: dhd:Dhaf_0875 protein of unknown function DUF477~PFAM: Protein of unknown function DUF477~SPTR: Putative uncharacterized protein%3B~PFAM: Domain of unknown function (DUF477) gene gene1617 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1591 Sgly_1592 Sgly_1592 Sgly_1592 1614596 1614874 + UPF0291 protein COGs: COG4224 conserved hypothetical protein~HAMAP: UPF0291 protein~InterPro IPR009242~KEGG: cpy:Cphy_2602 hypothetical protein~PFAM: Protein of unknown function DUF896%2C bacterial~SPTR: Putative uncharacterized protein%3B~PFAM: Bacterial protein of unknown function (DUF896) gene gene1618 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1592 Sgly_1593 Sgly_1593 Sgly_1593 1615005 1616213 + isocitrate dehydrogenase (NADP) COGs: COG0538 Isocitrate dehydrogenase~InterPro IPR004790: IPR001804~KEGG: dhd:Dhaf_1523 isocitrate dehydrogenase~PFAM: Isocitrate/isopropylmalate dehydrogenase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Isocitrate dehydrogenase NADP-dependent%2C eukaryotic~PFAM: Isocitrate/isopropylmalate dehydrogenase~TIGRFAM: isocitrate dehydrogenase%2C NADP-dependent%2C eukaryotic type gene gene1619 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1593 Sgly_1594 Sgly_1594 Sgly_1594 1616451 1618841 + Fibronectin type III domain protein COGs: COG2247 Putative cell wall-binding domain~InterPro IPR003961: IPR007253~KEGG: dhd:Dhaf_4482 putative cell wall binding repeat 2-containing protein~PFAM: Fibronectin%2C type III%3B Putative cell wall binding repeat 2~SMART: Fibronectin%2C type III~SPTR: Putative cell wall binding repeat 2-containing protein%3B~PFAM: Putative cell wall binding repeat 2%3B Fibronectin type III domain gene gene1620 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1594 Sgly_1595 Sgly_1595 Sgly_1595 1618906 1620780 - UPF0313 protein ygiQ COGs: COG1032 Fe-S oxidoreductase~HAMAP: UPF0313 protein ygiQ~InterPro IPR013704: IPR007197: IPR006638~KEGG: cdl:CDR20291_0851 hypothetical protein~PFAM: Radical SAM N-terminal%3B Radical SAM~SMART: Elongator protein 3/MiaB/NifB~SPTR: Putative radical SAM protein%3B~PFAM: Domain of unknown function (DUF3362)%3B Radical SAM superfamily%3B Radical SAM N-terminal gene gene1621 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1595 Sgly_1596 Sgly_1596 Sgly_1596 1621223 1622614 + exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis~InterPro IPR017475: IPR003362~KEGG: cth:Cthe_1349 undecaprenyl-phosphate galactose phosphotransferase~PFAM: Bacterial sugar transferase~PRIAM: Undecaprenyl-phosphate galactose phosphotransferase~SPTR: Undecaprenyl-phosphate galactose phosphotransferase%3B~TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase~PFAM: Bacterial sugar transferase~TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase gene gene1622 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1596 Sgly_1597 Sgly_1597 Sgly_1597 1622724 1625786 + Fucokinase COGs: COG2605 kinase related to galactokinase and mevalonate kinase~InterPro IPR012887: IPR006204~KEGG: sus:Acid_0569 bifunctional fucokinase/L-fucose-1-P-guanylyltransferase~PFAM: L-fucokinase%3B GHMP kinase~PRIAM: Fucokinase~SPTR: Predicted kinase related to galactokinase and mevalonate kinase%3B~PFAM: GHMP kinases N terminal domain%3B L-fucokinase gene gene1623 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1597 Sgly_1598 Sgly_1598 Sgly_1598 1625788 1626750 + KpsF/GutQ family protein COGs: COG0794 sugar phosphate isomerase involved in capsule formation~InterPro IPR004800: IPR001347: IPR000644~KEGG: slt:Slit_0441 KpsF/GutQ family protein~PFAM: Sugar isomerase (SIS)%3B Cystathionine beta-synthase%2C core~PRIAM: Arabinose-5-phosphate isomerase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: KpsF/GutQ~PFAM: CBS domain%3B SIS domain~TIGRFAM: KpsF/GutQ family protein gene gene1624 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1598 Sgly_1599 Sgly_1599 Sgly_1599 1626769 1627587 + Cof-like hydrolase COGs: COG0561 hydrolase of the HAD superfamily~InterPro IPR000150: IPR006379: IPR013200~KEGG: cpy:Cphy_0779 Cof-like hydrolase~PFAM: HAD superfamily hydrolase-like%2C type 3~SPTR: Cof-like hydrolase%3B~TIGRFAM: Cof protein%3B HAD-superfamily hydrolase%2C subfamily IIB~PFAM: haloacid dehalogenase-like hydrolase~TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily%3B HAD-superfamily hydrolase%2C subfamily IIB gene gene1625 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1599 Sgly_1600 Sgly_1600 Sgly_1600 1627601 1628035 + RbsD or FucU transport COGs: COG4154 Fucose dissimilation pathway protein FucU~InterPro IPR007721~KEGG: ccb:Clocel_1501 RbsD or FucU transport~PFAM: RbsD/FucU transport~SPTR: Fucose operon protein FucU%3B~PFAM: RbsD / FucU transport protein family gene gene1626 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1600 Sgly_1601 Sgly_1601 Sgly_1601 1628091 1629344 + glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: pjd:Pjdr2_0405 glycosyl transferase group 1~PFAM: Glycosyl transferase%2C group 1~SPTR: Glycosyl transferase group 1%3B~PFAM: Glycosyl transferases group 1 gene gene1627 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1601 Sgly_1602 Sgly_1602 Sgly_1602 1629388 1630251 + glycosyl transferase family 2 InterPro IPR001173~KEGG: bpb:bpr_I0813 glycosyl transferase GT2 family protein~PFAM: Glycosyl transferase%2C family 2~SPTR: Glycosyl transferase%2C family 2%3B~PFAM: Glycosyl transferase family 2 gene gene1628 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1602 Sgly_1603 Sgly_1603 Sgly_1603 1630297 1631400 + glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: bpb:bpr_I0818 glycosyl transferase GT4 family protein~PFAM: Glycosyl transferase%2C group 1~SPTR: Glycosyl transferase%2C group 1 family%3B~PFAM: Glycosyl transferases group 1 gene gene1629 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1603 Sgly_1604 Sgly_1604 Sgly_1604 1631407 1632303 + glycosyl transferase family 2 COGs: COG1216 glycosyltransferase~InterPro IPR001173~KEGG: hiq:CGSHiGG_07880 hypothetical protein~PFAM: Glycosyl transferase%2C family 2~SPTR: Glycosyl transferase%3B~PFAM: Glycosyl transferase family 2 gene gene1630 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1604 Sgly_1605 Sgly_1605 Sgly_1605 1632347 1633456 + hypothetical protein KEGG: she:Shewmr4_1324 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1631 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1605 Sgly_1606 Sgly_1606 Sgly_1606 1633495 1634952 + polysaccharide biosynthesis protein COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid~InterPro IPR002797~KEGG: cpy:Cphy_1209 polysaccharide biosynthesis protein~PFAM: Polysaccharide biosynthesis protein~SPTR: Polysaccharide biosynthesis protein%3B~PFAM: Polysaccharide biosynthesis protein gene gene1632 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1606 Sgly_1607 Sgly_1607 Sgly_1607 1635004 1636074 + hypothetical protein KEGG: stl:stu1102 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Polysaccharide pyruvyl transferase gene gene1633 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1607 Sgly_1608 Sgly_1608 Sgly_1608 1636140 1637342 + coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein InterPro IPR007525~KEGG: bth:BT_0386 putative F420H2-dehydrogenase~PFAM: Coenzyme F420 hydrogenase/dehydrogenase beta subunit%2C C-terminal~SPTR: Coenzyme F420-reducing hydrogenase%2C beta subunit%3B~PFAM: Coenzyme F420 hydrogenase/dehydrogenase%2C beta subunit C terminus gene gene1634 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1608 Sgly_1609 Sgly_1609 Sgly_1609 1637423 1639471 + glycosyl transferase family 2 COGs: COG5039 Exopolysaccharide biosynthesis protein~InterPro IPR001173~KEGG: bfs:BF0187 putative glycosyltransferase~PFAM: Glycosyl transferase%2C family 2~SPTR: Putative uncharacterized protein%3B~PFAM: Polysaccharide pyruvyl transferase%3B Glycosyl transferase family 2 gene gene1635 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1609 Sgly_1610 Sgly_1610 Sgly_1610 1639500 1640663 + hypothetical protein KEGG: cpe:CPE0465 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1636 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1610 Sgly_1611 Sgly_1611 Sgly_1611 1640733 1642277 - glycoside hydrolase family 5 COGs: COG2730 Endoglucanase~InterPro IPR001547~KEGG: dtu:Dtur_0670 glycoside hydrolase family 5~PFAM: Glycoside hydrolase%2C family 5~SPTR: Glycoside hydrolase family 5%3B~PFAM: Cellulase (glycosyl hydrolase family 5) gene gene1637 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1611 Sgly_1612 Sgly_1612 Sgly_1612 1642723 1643454 - IstB domain protein ATP-binding protein COGs: COG1484 DNA replication protein~InterPro IPR002611: IPR003593~KEGG: dsy:DSY0836 hypothetical protein~PFAM: IstB-like ATP-binding protein~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: IstB-like ATP binding protein gene gene1638 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1612 Sgly_1613 Sgly_1613 Sgly_1613 1643454 1644962 - Integrase catalytic region COGs: COG4584 Transposase and inactivated derivatives~InterPro IPR001584~KEGG: bha:BH3965 transposase (22)~PFAM: Integrase%2C catalytic core~SPTR: Integrase catalytic region%3B~PFAM: Integrase core domain gene gene1639 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1613 Sgly_1614 Sgly_1614 Sgly_1614 1645359 1646030 + lipopolysaccharide biosynthesis protein COGs: COG3944 Capsular polysaccharide biosynthesis protein~InterPro IPR003856~KEGG: cth:Cthe_1363 lipopolysaccharide biosynthesis~PFAM: Lipopolysaccharide biosynthesis~SPTR: Putative uncharacterized protein%3B~PFAM: Chain length determinant protein gene gene1640 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1614 Sgly_1615 Sgly_1615 Sgly_1615 1646045 1646803 + capsular exopolysaccharide family COGs: COG0489 ATPase involved in chromosome partitioning~InterPro IPR005702~KEGG: cth:Cthe_2653 hypothetical protein~PRIAM: Non-specific protein-tyrosine kinase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Exopolysaccharide synthesis protein~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain~TIGRFAM: capsular exopolysaccharide family gene gene1641 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1615 Sgly_1616 Sgly_1616 Sgly_1616 1646904 1647440 + VanZ family protein KEGG: dhd:Dhaf_4454 VanZ family protein~SPTR: VanZ family protein%3B~PFAM: VanZ like family gene gene1642 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1616 Sgly_1617 Sgly_1617 Sgly_1617 1647527 1649494 + Asparagine synthase (glutamine-hydrolyzing) COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing)~InterPro IPR001962~KEGG: dae:Dtox_2340 asparagine synthase~PFAM: Asparagine synthase~PRIAM: Asparagine synthase (glutamine-hydrolyzing)~SPTR: Asparagine synthase%3B~PFAM: Asparagine synthase gene gene1643 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1617 Sgly_1618 Sgly_1618 Sgly_1618 1649546 1649677 - hypothetical protein KEGG: ppr:PBPRB1892 hypothetical protein gene gene1644 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1618 Sgly_1619 Sgly_1619 Sgly_1619 1649817 1650716 - HPr kinase KEGG: dae:Dtox_3276 HPr kinase~SPTR: HPr kinase gene gene1645 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1619 Sgly_1620 Sgly_1620 Sgly_1620 1650913 1651365 + hypothetical protein KEGG: dae:Dtox_3274 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1646 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1620 Sgly_1621 Sgly_1621 Sgly_1621 1651429 1651731 + hypothetical protein KEGG: ppd:Ppro_0048 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Coenzyme PQQ synthesis protein D (PqqD) gene gene1647 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1621 Sgly_1622 Sgly_1622 Sgly_1622 1651836 1653548 + Xenobiotic-transporting ATPase COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterPro IPR001140: IPR003439: IPR003593~KEGG: bpb:bpr_I2378 ABC transporter ATP-binding/permease~PFAM: ABC transporter-like%3B ABC transporter%2C transmembrane domain~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Probable ABC transporter%3B~PFAM: ABC transporter transmembrane region%3B ABC transporter gene gene1648 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1622 Sgly_1623 Sgly_1623 Sgly_1623 1654157 1655329 + metallophosphoesterase COGs: COG1408 phosphohydrolase~InterPro IPR004843~KEGG: tjr:TherJR_2869 metallophosphoesterase~PFAM: Metallophosphoesterase~SPTR: Metallophosphoesterase%3B~PFAM: Calcineurin-like phosphoesterase gene gene1649 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1623 Sgly_1624 Sgly_1624 Sgly_1624 1655435 1656502 + Lipoprotein LpqB%2C GerMN domain protein InterPro IPR019606~KEGG: dhd:Dhaf_0896 hypothetical protein~PFAM: Lipoprotein LpqB%2C GerMN domain~SPTR: Putative uncharacterized protein%3B~PFAM: Sporulation and spore germination gene gene1650 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1624 Sgly_1625 Sgly_1625 Sgly_1625 1656641 1659265 + calcium-translocating P-type ATPase%2C PMCA-type COGs: COG0474 Cation transport ATPase~InterPro IPR006408: IPR001757: IPR004014: IPR008250: IPR 005834: IPR006068~KEGG: csc:Csac_0369 calcium-translocating P-type ATPase%2C PMCA-type~PFAM: ATPase%2C P-type%2C ATPase-associated domain%3B ATPase%2C P-type cation-transporter%2C N-terminal%3B Haloacid dehalogenase-like hydrolase%3B ATPase%2C P-type cation-transporter%2C C-terminal~PRIAM: Calcium-transporting ATPase~SPTR: Calcium-translocating P-type ATPase%2C PMCA-type%3B~TIGRFAM: ATPase%2C P-type%2C calcium-transporting%2C PMCA-type%3B ATPase%2C P-type%2C K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter~PFAM: E1-E2 ATPase%3B Cation transporting ATPase%2C C-terminus%3B Cation transporter/ATPase%2C N-terminus%3B haloacid dehalogenase-like hydrolase~TIGRFAM: plasma-membrane calcium-translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC%3B potassium and/or sodium efflux P-type ATPase%2C fungal-type gene gene1651 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1625 Sgly_1626 Sgly_1626 Sgly_1626 1659292 1659756 + Guanine deaminase COGs: COG0590 Cytosine/adenosine deaminase~InterPro IPR002125~KEGG: tdn:Suden_1831 guanine deaminase~PFAM: CMP/dCMP deaminase%2C zinc-binding~PRIAM: Guanine deaminase~SPTR: Guanine deaminase%3B~PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region gene gene1652 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1626 Sgly_1627 Sgly_1627 Sgly_1627 1659813 1661393 + diguanylate cyclase and metal dependent phosphohydrolase COGs: COG2206 HD-GYP domain~InterPro IPR000014: IPR000160: IPR006675: IPR013655: IPR 006674: IPR001610: IPR003607~KEGG: cbb:CLD_3030 putative sensory box-containing diguanylate cyclase~PFAM: Diguanylate cyclase%2C predicted%3B PAS fold-3%3B Metal-dependent phosphohydrolase%2C HD subdomain~SMART: Diguanylate cyclase%2C predicted%3B PAC motif%3B Metal-dependent phosphohydrolase%2C HD domain~SPTR: Putative sensory box-containing diguanylate cyclase%3B~TIGRFAM: Diguanylate cyclase%2C predicted%3B PAS%3B HDIG~PFAM: HD domain%3B GGDEF domain%3B PAS fold~TIGRFAM: PAS domain S-box%3B diguanylate cyclase (GGDEF) domain%3B uncharacterized domain HDIG gene gene1653 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1627 Sgly_1628 Sgly_1628 Sgly_1628 1661653 1661811 + hypothetical protein gene gene1654 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1628 Sgly_1629 Sgly_1629 Sgly_1629 1661808 1662836 + 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase COGs: COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase~InterPro IPR006219: IPR006218~KEGG: clj:CLJU_c14780 phospho-2-dehydro-3-deoxyheptonate aldolase~PFAM: DAHP synthetase I/KDSA~PRIAM: 3-deoxy-7-phosphoheptulonate synthase~SPTR: Phospho-2-dehydro-3-deoxyheptonate aldolase%3B~TIGRFAM: DHAP synthase%2C class 1~PFAM: DAHP synthetase I family~TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase gene gene1655 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1629 Sgly_1630 Sgly_1630 Sgly_1630 1663031 1664341 + protein of unknown function DUF21 COGs: COG1253 Hemolysins and related protein containing CBS domains~InterPro IPR002550: IPR000644: IPR005170~KEGG: cth:Cthe_2870 hypothetical protein~PFAM: Protein of unknown function DUF21%3B Cystathionine beta-synthase%2C core%3B Transporter-associated domain~SPTR: Putative uncharacterized protein%3B~PFAM: CBS domain%3B Domain of unknown function DUF21%3B Transporter associated domain gene gene1656 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1630 Sgly_1631 Sgly_1631 Sgly_1631 1664452 1664922 - UspA domain-containing protein COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein~InterPro IPR006016~KEGG: dae:Dtox_0982 UspA domain protein~PFAM: UspA~SPTR: UspA domain protein%3B~PFAM: Universal stress protein family gene gene1657 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1631 Sgly_1632 Sgly_1632 Sgly_1632 1665124 1665984 + degV family protein COGs: COG1307 conserved hypothetical protein~InterPro IPR003797~KEGG: dhd:Dhaf_2385 DegV family protein~PFAM: DegV~SPTR: Putative uncharacterized protein%3B~TIGRFAM: DegV~PFAM: Uncharacterised protein%2C DegV family COG1307~TIGRFAM: EDD domain protein%2C DegV family gene gene1658 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1632 Sgly_1633 Sgly_1633 Sgly_1633 1665992 1666396 + phenylacetic acid degradation-related protein COGs: COG2050 Uncharacterized protein possibly involved in aromatic compounds catabolism~InterPro IPR003736: IPR006683~KEGG: mma:MM_1896 phenylacetic acid degradation protein~PFAM: Thioesterase superfamily~SPTR: Phenylacetic acid degradation protein%3B~TIGRFAM: Phenylacetic acid degradation-related protein~PFAM: Thioesterase superfamily~TIGRFAM: uncharacterized domain 1%3B phenylacetic acid degradation protein PaaD gene gene1659 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1633 Sgly_1634 Sgly_1634 Sgly_1634 1666423 1667376 + 2-dehydropantoate 2-reductase COGs: COG1893 Ketopantoate reductase~InterPro IPR003710: IPR013332: IPR013752~KEGG: msi:Msm_0033 ketopantoate reductase%2C ApbA~PFAM: Ketopantoate reductase ApbA/PanE%2C C-terminal%3B Ketopantoate reductase ApbA/PanE%2C N-terminal~PRIAM: 2-dehydropantoate 2-reductase~SPTR: 2-dehydropantoate 2-reductase%3B~TIGRFAM: Ketopantoate reductase ApbA/PanE~PFAM: Ketopantoate reductase PanE/ApbA%3B Ketopantoate reductase PanE/ApbA C terminal~TIGRFAM: 2-dehydropantoate 2-reductase gene gene1660 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1634 Sgly_1635 Sgly_1635 Sgly_1635 1667526 1668704 + Alcohol dehydrogenase COGs: COG1454 Alcohol dehydrogenase class IV~InterPro IPR001670~KEGG: csc:Csac_0711 iron-containing alcohol dehydrogenase~PFAM: Alcohol dehydrogenase%2C iron-type~PRIAM: Alcohol dehydrogenase~SPTR: Iron-containing alcohol dehydrogenase%3B~PFAM: Iron-containing alcohol dehydrogenase gene gene1661 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1635 Sgly_1636 Sgly_1636 Sgly_1636 1668729 1669943 + major facilitator superfamily MFS_1 COGs: COG2814 Arabinose efflux permease~InterPro IPR011701~KEGG: cbe:Cbei_1954 major facilitator transporter~PFAM: Major facilitator superfamily MFS-1~SPTR: Major facilitator superfamily MFS_1%3B~PFAM: Major Facilitator Superfamily gene gene1662 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1636 Sgly_1637 Sgly_1637 Sgly_1637 1670090 1670620 + hypothetical protein KEGG: pjd:Pjdr2_5552 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1663 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1637 Sgly_1638 Sgly_1638 Sgly_1638 1670840 1672447 + efflux transporter%2C RND family%2C MFP subunit COGs: COG1566 Multidrug resistance efflux pump~InterPro IPR006143~KEGG: dhd:Dhaf_1719 efflux transporter%2C RND family%2C MFP subunit~PFAM: Secretion protein HlyD~SPTR: Efflux transporter%2C RND family%2C MFP subunit%3B~TIGRFAM: Secretion protein HlyD~PFAM: HlyD family secretion protein~TIGRFAM: RND family efflux transporter%2C MFP subunit gene gene1664 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1638 Sgly_1639 Sgly_1639 Sgly_1639 1672461 1673180 + Phosphonate-transporting ATPase COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component~InterPro IPR003439: IPR003593~KEGG: dhd:Dhaf_1720 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Phosphonate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~manually curated~PFAM: ABC transporter gene gene1665 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1639 Sgly_1640 Sgly_1640 Sgly_1640 1673184 1674413 + protein of unknown function DUF214 COGs: COG0577 ABC-type antimicrobial peptide transport system permease component~InterPro IPR003838~KEGG: dsy:DSY3655 hypothetical protein~PFAM: Protein of unknown function DUF214%2C permase predicted~SPTR: Putative uncharacterized protein%3B~PFAM: Predicted permease gene gene1666 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1640 Sgly_1641 Sgly_1641 Sgly_1641 1674428 1676008 + cell wall binding repeat 2-containing protein COGs: COG2247 Putative cell wall-binding domain~InterPro IPR007253~KEGG: dhd:Dhaf_1722 putative cell wall binding repeat 2-containing protein~PFAM: Putative cell wall binding repeat 2~SPTR: Putative uncharacterized protein%3B~PFAM: Putative cell wall binding repeat 2 gene gene1667 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1641 Sgly_1642 Sgly_1642 Sgly_1642 1676117 1677328 + hypothetical protein COGs: COG5542 integral membrane protein~KEGG: tmt:Tmath_0950 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: ALG3 protein gene gene1668 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1642 Sgly_1643 Sgly_1643 Sgly_1643 1677341 1678333 - UDP-galactose 4-epimerase COGs: COG1087 UDP-glucose 4-epimerase~InterPro IPR005886: IPR001509~KEGG: dhd:Dhaf_4455 UDP-glucose 4-epimerase~PFAM: NAD-dependent epimerase/dehydratase~PRIAM: UDP-glucose 4-epimerase~SPTR: UDP-glucose 4-epimerase%3B~TIGRFAM: UDP-glucose 4-epimerase~PFAM: NAD dependent epimerase/dehydratase family~TIGRFAM: UDP-glucose-4-epimerase gene gene1669 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1643 Sgly_1644 Sgly_1644 Sgly_1644 1678605 1679288 + two component transcriptional regulator%2C winged helix family COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR001789: IPR001867~KEGG: dhd:Dhaf_1005 two component transcriptional regulator%2C winged helix family~PFAM: Signal transduction response regulator%2C receiver domain%3B Signal transduction response regulator%2C C-terminal~SMART: Signal transduction response regulator%2C receiver domain~SPTR: Putative uncharacterized protein%3B~PFAM: Response regulator receiver domain%3B Transcriptional regulatory protein%2C C terminal gene gene1670 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1644 Sgly_1645 Sgly_1645 Sgly_1645 1679285 1680793 + integral membrane sensor signal transduction histidine kinase COGs: COG5002 Signal transduction histidine kinase~InterPro IPR003660: IPR003661: IPR003594~KEGG: drm:Dred_0324 integral membrane sensor signal transduction histidine kinase~PFAM: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain%3B HAMP linker domain~SMART: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain%3B HAMP linker domain~SPTR: Integral membrane sensor signal transduction histidine kinase%3B~PFAM: HAMP domain%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain gene gene1671 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1645 Sgly_1646 Sgly_1646 Sgly_1646 1681024 1681974 + glycosyl transferase family 2 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis~InterPro IPR001173~KEGG: bpu:BPUM_3158 glycosyltransferase~PFAM: Glycosyl transferase%2C family 2~SPTR: Glycosyltransferase%3B~PFAM: Glycosyl transferase family 2 gene gene1672 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1646 Sgly_1647 Sgly_1647 Sgly_1647 1681980 1682381 + GtrA family protein COGs: COG2246 membrane protein~InterPro IPR007267~KEGG: mta:Moth_2360 GtrA-like protein~PFAM: GtrA-like protein~SPTR: GtrA family protein%3B~PFAM: GtrA-like protein gene gene1673 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1647 Sgly_1648 Sgly_1648 Sgly_1648 1682412 1683086 + two component transcriptional regulator%2C winged helix family COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR001789: IPR001867~KEGG: tjr:TherJR_2638 two component transcriptional regulator%2C winged helix family~PFAM: Signal transduction response regulator%2C C-terminal%3B Signal transduction response regulator%2C receiver domain~SMART: Signal transduction response regulator%2C receiver domain~SPTR: Two component transcriptional regulator%2C winged helix family%3B~PFAM: Response regulator receiver domain%3B Transcriptional regulatory protein%2C C terminal gene gene1674 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1648 Sgly_1649 Sgly_1649 Sgly_1649 1683194 1684093 + response regulator receiver modulated CheW protein COGs: COG0835 Chemotaxis signal transduction protein~InterPro IPR002545: IPR001789~KEGG: cno:NT01CX_2338 chemotaxis protein CheV-like protein~PFAM: Signal transduction response regulator%2C receiver domain%3B CheW-like protein~SMART: Signal transduction response regulator%2C receiver domain%3B CheW-like protein~SPTR: Putative chemotaxis protein CheV%3B~PFAM: CheW-like domain%3B Response regulator receiver domain gene gene1675 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1649 Sgly_1650 Sgly_1650 Sgly_1650 1684151 1685179 + 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase COGs: COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase~InterPro IPR006219: IPR006218~KEGG: clj:CLJU_c14780 phospho-2-dehydro-3-deoxyheptonate aldolase~PFAM: DAHP synthetase I/KDSA~PRIAM: 3-deoxy-7-phosphoheptulonate synthase~SPTR: Phospho-2-dehydro-3-deoxyheptonate aldolase%3B~TIGRFAM: DHAP synthase%2C class 1~PFAM: DAHP synthetase I family~TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase gene gene1676 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1650 Sgly_1651 Sgly_1651 Sgly_1651 1685414 1685956 + Rubrerythrin COGs: COG1592 Rubrerythrin~InterPro IPR004039: IPR003251~KEGG: drm:Dred_0588 rubrerythrin~PFAM: Rubrerythrin%3B Rubredoxin-type Fe(Cys)4 protein~SPTR: Rubrerythrin%3B~PFAM: Rubrerythrin gene gene1677 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1651 Sgly_1652 Sgly_1652 Sgly_1652 1685959 1686297 + arsenate reductase like protein COGs: COG1393 Arsenate reductase and related protein glutaredoxin family~InterPro IPR006660~KEGG: ckr:CKR_1540 hypothetical protein~PFAM: Arsenate reductase-like~SPTR: Putative uncharacterized protein%3B~PFAM: ArsC family gene gene1678 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1652 Sgly_1653 Sgly_1653 Sgly_1653 1687016 1687789 + thiazole-phosphate synthase COGs: COG2022 Uncharacterized protein of thiazole biosynthesis~HAMAP: Thiazole biosynthesis~InterPro IPR008867~KEGG: cth:Cthe_0598 thiazole synthase~PFAM: Thiazole biosynthesis~SPTR: Thiazole synthase%3B~PFAM: Thiazole biosynthesis protein ThiG gene gene1679 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1653 Sgly_1654 Sgly_1654 Sgly_1654 1687808 1688911 + tyrosine lyase ThiH COGs: COG1060 Thiamine biosynthesis protein ThiH~InterPro IPR012726: IPR007197: IPR010722~KEGG: dae:Dtox_1681 thiazole biosynthesis protein ThiH~PFAM: Biotin/thiamin synthesis-associated protein%3B Radical SAM~SPTR: Thiazole biosynthesis protein ThiH%3B~TIGRFAM: Thiazole biosynthesis ThiH~PFAM: Radical SAM superfamily%3B Biotin and Thiamin Synthesis associated domain~TIGRFAM: thiazole biosynthesis protein ThiH gene gene1680 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1654 Sgly_1655 Sgly_1655 Sgly_1655 1688925 1689575 + thiamine-phosphate diphosphorylase COGs: COG0352 Thiamine monophosphate synthase~HAMAP: Thiamine monophosphate synthase~InterPro IPR003733~KEGG: cth:Cthe_0601 thiamine-phosphate pyrophosphorylase~PFAM: Thiamine monophosphate synthase~SPTR: Thiamine-phosphate pyrophosphorylase%3B~TIGRFAM: Thiamine monophosphate synthase~PFAM: Thiamine monophosphate synthase/TENI~TIGRFAM: thiamine-phosphate pyrophosphorylase gene gene1681 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1655 Sgly_1656 Sgly_1656 Sgly_1656 1689575 1690876 + hydroxymethylpyrimidine synthase COGs: COG0422 Thiamine biosynthesis protein ThiC~HAMAP: Thiamine biosynthesis protein ThiC~InterPro IPR002817~KEGG: cth:Cthe_0602 thiamine biosynthesis protein ThiC~PFAM: Thiamine biosynthesis protein ThiC~SPTR: Phosphomethylpyrimidine synthase%3B~TIGRFAM: Thiamine biosynthesis protein ThiC~PFAM: ThiC family~TIGRFAM: thiamine biosynthesis protein ThiC gene gene1682 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1656 Sgly_1657 Sgly_1657 Sgly_1657 1690939 1691136 + thiamine biosynthesis protein ThiS InterPro IPR010035: IPR003749~KEGG: cth:Cthe_0597 thiamine biosynthesis protein ThiS~PFAM: ThiamineS~SPTR: Thiamine biosynthesis protein ThiS%3B~TIGRFAM: ThiS%2C thiamine-biosynthesis~PFAM: ThiS family~TIGRFAM: thiamine biosynthesis protein ThiS gene gene1683 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1657 Sgly_1658 Sgly_1658 Sgly_1658 1691140 1691949 + UBA/THIF-type NAD/FAD binding protein COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2~InterPro IPR000594: IPR007901~KEGG: mta:Moth_1970 UBA/ThiF-type NAD/FAD binding fold~PFAM: UBA/THIF-type NAD/FAD binding fold%3B MoeZ/MoeB~SPTR: UBA/THIF-type NAD/FAD binding fold%3B~PFAM: MoeZ/MoeB domain%3B ThiF family gene gene1684 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1658 Sgly_1659 Sgly_1659 Sgly_1659 1692217 1692606 + transcriptional regulator%2C GntR family COGs: COG1725 transcriptional regulator protein~InterPro IPR000524~KEGG: tmt:Tmath_2079 transcriptional regulator%2C GntR family~PFAM: HTH transcriptional regulator%2C GntR~SMART: HTH transcriptional regulator%2C GntR~SPTR: Transcriptional regulator%2C GntR family%3B~PFAM: Bacterial regulatory proteins%2C gntR family gene gene1685 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1659 Sgly_1660 Sgly_1660 Sgly_1660 1692603 1693466 + ABC transporter related protein COGs: COG1131 ABC-type multidrug transport system ATPase component~InterPro IPR003439: IPR003593~KEGG: tit:Thit_2159 ABC transporter related protein~PFAM: ABC transporter-like~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related protein%3B~PFAM: ABC transporter gene gene1686 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1660 Sgly_1661 Sgly_1661 Sgly_1661 1693460 1694134 + hypothetical protein KEGG: dhd:Dhaf_2277 transporter protein~SPTR: Putative uncharacterized protein gene gene1687 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1661 Sgly_1662 Sgly_1662 Sgly_1662 1694206 1694895 + hypothetical protein KEGG: slp:Slip_0229 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Yip1 domain gene gene1688 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1662 Sgly_1663 Sgly_1663 Sgly_1663 1694921 1696216 + efflux transporter%2C RND family%2C MFP subunit COGs: COG1566 Multidrug resistance efflux pump~InterPro IPR006143~KEGG: slp:Slip_0228 efflux transporter%2C RND family%2C MFP subunit~PFAM: Secretion protein HlyD~SPTR: Efflux transporter%2C RND family%2C MFP subunit%3B~TIGRFAM: Secretion protein HlyD~PFAM: HlyD family secretion protein~TIGRFAM: RND family efflux transporter%2C MFP subunit gene gene1689 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1663 Sgly_1664 Sgly_1664 Sgly_1664 1696213 1696947 + Phosphonate-transporting ATPase COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component~InterPro IPR003439: IPR003593~KEGG: dae:Dtox_1572 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Phosphonate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related%3B~PFAM: ABC transporter gene gene1690 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1664 Sgly_1665 Sgly_1665 Sgly_1665 1696944 1698128 + protein of unknown function DUF214 COGs: COG0577 ABC-type antimicrobial peptide transport system permease component~InterPro IPR003838~KEGG: slp:Slip_0226 protein of unknown function DUF214~PFAM: Protein of unknown function DUF214%2C permase predicted~SPTR: Putative uncharacterized protein%3B~PFAM: Predicted permease gene gene1691 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1665 Sgly_1666 Sgly_1666 Sgly_1666 1698194 1698316 - hypothetical protein KEGG: cce:Ccel_2466 hypothetical protein~SPTR: Putative uncharacterized protein%3B~manually curated gene gene1692 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1666 Sgly_1667 Sgly_1667 Sgly_1667 1698559 1699305 + hypothetical protein KEGG: dae:Dtox_1719 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1693 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1667 Sgly_1668 Sgly_1668 Sgly_1668 1699376 1699609 + 4-oxalocrotonate tautomerase InterPro IPR004370~KEGG: cth:Cthe_0652 4-oxalocrotonate tautomerase~PFAM: 4-oxalocrotonate tautomerase~SPTR: 4-oxalocrotonate tautomerase%3B~PFAM: Tautomerase enzyme~TIGRFAM: 4-oxalocrotonate tautomerase family enzyme gene gene1694 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1668 Sgly_1669 Sgly_1669 Sgly_1669 1699639 1699791 + hypothetical protein gene gene1695 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1669 Sgly_1670 Sgly_1670 Sgly_1670 1699761 1700768 - phosphate transporter COGs: COG0306 Phosphate/sulphate permease~InterPro IPR001204~KEGG: dhd:Dhaf_4358 phosphate transporter~PFAM: Phosphate transporter~SPTR: Putative uncharacterized protein%3B~PFAM: Phosphate transporter family gene gene1696 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1670 Sgly_1671 Sgly_1671 Sgly_1671 1700761 1701393 - putative phosphate transport regulator COGs: COG1392 Phosphate transport regulator (distant homolog of PhoU)~InterPro IPR018445~KEGG: dhd:Dhaf_4359 protein of unknown function DUF47~PFAM: Putitive phosphate transport regulator~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function DUF47~TIGRFAM: conserved hypothetical protein TIGR00153 gene gene1697 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1671 Sgly_1672 Sgly_1672 Sgly_1672 1701954 1702469 + metal dependent phosphohydrolase InterPro IPR006675: IPR006674: IPR003607~KEGG: ccb:Clocel_0957 hypothetical protein~PFAM: Metal-dependent phosphohydrolase%2C HD subdomain~SMART: Metal-dependent phosphohydrolase%2C HD domain~SPTR: Putative uncharacterized protein%3B~TIGRFAM: HDIG~PFAM: HD domain~TIGRFAM: uncharacterized domain HDIG gene gene1698 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1672 Sgly_1673 Sgly_1673 Sgly_1673 1702610 1703065 + ferric uptake regulator%2C Fur family COGs: COG0735 Fe2+/Zn2+ uptake regulation protein~InterPro IPR002481~KEGG: ttm:Tthe_1266 ferric uptake regulator%2C Fur family~PFAM: Ferric-uptake regulator~SPTR: Ferric uptake regulator%2C Fur family%3B~PFAM: Ferric uptake regulator family gene gene1699 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1673 Sgly_1674 Sgly_1674 Sgly_1674 1703078 1703572 + ybaK/ebsC protein COGs: COG2606 conserved hypothetical protein~InterPro IPR004369: IPR007214~KEGG: afl:Aflv_2797 hypothetical protein~PFAM: YbaK/aminoacyl-tRNA synthetase-associated domain~SPTR: YbaK/ebsC protein%3B~TIGRFAM: Conserved hypothetical protein CHP00011~PFAM: YbaK / prolyl-tRNA synthetases associated domain~TIGRFAM: ybaK/ebsC protein gene gene1700 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1674 Sgly_1675 Sgly_1675 Sgly_1675 1703620 1705071 - cardiolipin synthetase 2 COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase~HAMAP: Cardiolipin synthase~InterPro IPR001736~KEGG: cno:NT01CX_1068 cardiolipin synthetase~PFAM: Phospholipase D/Transphosphatidylase~SMART: Phospholipase D/Transphosphatidylase~SPTR: Cardiolipin synthetase%3B~PFAM: Phospholipase D Active site motif gene gene1701 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1675 Sgly_1676 Sgly_1676 Sgly_1676 1705189 1705833 + hypothetical protein KEGG: drm:Dred_1137 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF2953) gene gene1702 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1676 Sgly_1677 Sgly_1677 Sgly_1677 1705815 1706246 + sporulation protein YtfJ COGs: COG3874 conserved hypothetical protein~InterPro IPR014229~KEGG: tjr:TherJR_1631 sporulation protein YtfJ~PFAM: Sporulation protein YtfJ~SPTR: Sporulation protein YtfJ%3B~TIGRFAM: Sporulation protein YtfJ~PFAM: Sporulation protein YtfJ (Spore_YtfJ)~TIGRFAM: sporulation protein YtfJ gene gene1703 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1677 Sgly_1678 Sgly_1678 Sgly_1678 1706339 1706920 + nucleoside recognition domain protein COGs: COG2715 Uncharacterized membrane protein required for spore maturation in B.subtilis.~InterPro IPR011642~KEGG: dhd:Dhaf_3415 nucleoside recognition domain protein~PFAM: Nucleoside recognition~SPTR: Putative uncharacterized protein%3B~PFAM: Nucleoside recognition gene gene1704 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1678 Sgly_1679 Sgly_1679 Sgly_1679 1706917 1707462 + nucleoside recognition domain protein COGs: COG0700 membrane protein~InterPro IPR011642~KEGG: dhd:Dhaf_3414 nucleoside recognition domain protein~PFAM: Nucleoside recognition~SPTR: Putative uncharacterized protein%3B~PFAM: Nucleoside recognition gene gene1705 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1679 Sgly_1680 Sgly_1680 Sgly_1680 1707554 1708366 + ribosomal large subunit pseudouridine synthase B COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase~InterPro IPR000748: IPR002942: IPR006145~KEGG: dhd:Dhaf_3411 pseudouridine synthase~PFAM: Pseudouridine synthase%2C RsuA and RluB/C/D/E/F%3B RNA-binding S4~SMART: RNA-binding S4~SPTR: Pseudouridine synthase%3B~TIGRFAM: Pseudouridine synthase%2C RsuA/RluB/E/F~PFAM: RNA pseudouridylate synthase%3B S4 domain~TIGRFAM: pseudouridine synthase gene gene1706 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1680 Sgly_1681 Sgly_1681 Sgly_1681 1708464 1709165 + transcriptional regulator%2C GntR family COGs: COG2186 Transcriptional regulators~InterPro IPR000524: IPR011711~KEGG: dhd:Dhaf_3405 GntR domain protein~PFAM: GntR%2C C-terminal%3B HTH transcriptional regulator%2C GntR~SMART: HTH transcriptional regulator%2C GntR~SPTR: Putative uncharacterized protein%3B~PFAM: Bacterial regulatory proteins%2C gntR family%3B FCD domain gene gene1707 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1681 Sgly_1682 Sgly_1682 Sgly_1682 1709339 1710046 + transcriptional regulator%2C GntR family COGs: COG2186 Transcriptional regulators~InterPro IPR000524: IPR011711~KEGG: dhd:Dhaf_3404 GntR domain protein~PFAM: HTH transcriptional regulator%2C GntR%3B GntR%2C C-terminal~SMART: HTH transcriptional regulator%2C GntR~SPTR: Putative uncharacterized protein%3B~PFAM: Bacterial regulatory proteins%2C gntR family%3B FCD domain gene gene1708 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1682 Sgly_1683 Sgly_1683 Sgly_1683 1710084 1711127 + 4Fe-4S ferredoxin iron-sulfur binding domain protein KEGG: dhd:Dhaf_3403 4Fe-4S ferredoxin iron-sulfur binding domain protein~SPTR: Putative uncharacterized protein%3B~PFAM: 4Fe-4S binding domain gene gene1709 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1683 Sgly_1684 Sgly_1684 Sgly_1684 1711145 1712413 + HI0933 family protein COGs: COG2081 flavoprotein~InterPro IPR004792~KEGG: dhd:Dhaf_3399 HI0933 family protein~PFAM: HI0933-like protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: HI0933-like protein~PFAM: HI0933-like protein~TIGRFAM: flavoprotein%2C HI0933 family gene gene1710 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1684 Sgly_1685 Sgly_1685 Sgly_1685 1712436 1712861 + hypothetical protein KEGG: dhd:Dhaf_3398 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1711 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1685 Sgly_1686 Sgly_1686 Sgly_1686 1713033 1713293 + pseudogene gene1712 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1686 Sgly_1687 Sgly_1687 Sgly_1687 1713290 1713670 + chorismate mutase COGs: COG4401 Chorismate mutase~InterPro IPR008243~KEGG: pth:PTH_1630 chorismate mutase~PFAM: Chorismate mutase%2C AroH class~SPTR: Chorismate mutase%3B~TIGRFAM: Chorismate mutase%2C AroH class~PFAM: Chorismate mutase type I~TIGRFAM: monofunctional chorismate mutase%2C gram positive type%2C clade 1 gene gene1713 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1687 Sgly_1688 Sgly_1688 Sgly_1688 1713755 1713931 - hypothetical protein gene gene1714 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1688 Sgly_1689 Sgly_1689 Sgly_1689 1714136 1714801 + Abortive infection protein InterPro IPR003675~KEGG: dhd:Dhaf_3388 abortive infection protein~PFAM: Abortive infection protein~SPTR: Putative uncharacterized protein%3B~PFAM: CAAX amino terminal protease family gene gene1715 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1689 Sgly_1690 Sgly_1690 Sgly_1690 1714874 1715530 + cytidylate kinase COGs: COG0283 Cytidylate kinase~HAMAP: Cytidylate kinase~InterPro IPR003136: IPR000623: IPR011994~KEGG: dhd:Dhaf_3387 cytidylate kinase~PFAM: Cytidylate kinase domain%3B Shikimate kinase~SPTR: Cytidylate kinase%3B~TIGRFAM: Cytidylate kinase~PFAM: Cytidylate kinase%3B Shikimate kinase~TIGRFAM: cytidylate kinase gene gene1716 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1690 Sgly_1691 Sgly_1691 Sgly_1691 1715527 1716111 + phospholipid/glycerol acyltransferase COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase~InterPro IPR002123~KEGG: dhd:Dhaf_3386 1-acyl-sn-glycerol-3-phosphate acyltransferase~PFAM: Phospholipid/glycerol acyltransferase~SMART: Phospholipid/glycerol acyltransferase~SPTR: Putative uncharacterized protein%3B~PFAM: Acyltransferase~TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases gene gene1717 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1691 Sgly_1692 Sgly_1692 Sgly_1692 1716196 1718184 + 4-hydroxy-3-methylbut-2-enyl diphosphate reductase COGs: COG0539 Ribosomal protein S1~HAMAP: LytB protein~InterPro IPR003451: IPR003029~KEGG: dhd:Dhaf_3385 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein~PFAM: LytB protein%3B Ribosomal protein S1%2C RNA binding domain~PRIAM: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase.%2C Polyribonucleotide nucleotidyltransferase~SPTR: Hydroxymethylbutenyl pyrophosphate reductase%3B~TIGRFAM: LytB protein~PFAM: LytB protein%3B S1 RNA binding domain~TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming)%3B ribosomal protein S1 gene gene1718 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1692 Sgly_1693 Sgly_1693 Sgly_1693 1718275 1719435 + cell division-specific peptidoglycan biosynthesis regulator FtsW COGs: COG0772 Bacterial cell division membrane protein~InterPro IPR013437: IPR001182~KEGG: dsy:DSY2254 hypothetical protein~PFAM: Cell cycle protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Cell division protein FtsW~PFAM: Cell cycle protein~TIGRFAM: cell division protein FtsW gene gene1719 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1693 Sgly_1694 Sgly_1694 Sgly_1694 1719432 1720769 + protein of unknown function DUF512 COGs: COG1625 Fe-S oxidoreductase related to NifB/MoaA family~InterPro IPR007549~KEGG: dhd:Dhaf_3382 protein of unknown function DUF512~PFAM: Protein of unknown function DUF512~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF512)~TIGRFAM: putative FeS-containing Cyanobacterial-specific oxidoreductase gene gene1720 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1694 Sgly_1695 Sgly_1695 Sgly_1695 1720762 1722093 + GTP-binding protein engA COGs: COG1160 GTPase~HAMAP: GTP-binding%2C EngA~InterPro IPR016484: IPR005225: IPR002917: IPR003593~KEGG: dsy:DSY2251 GTP-binding protein EngA~PFAM: GTP-binding protein%2C HSR1-related~SMART: ATPase%2C AAA+ type%2C core~SPTR: GTP-binding protein engA%3B~TIGRFAM: GTP-binding%2C EngA%3B Small GTP-binding protein~PFAM: GTPase of unknown function~TIGRFAM: ribosome-associated GTPase EngA%3B small GTP-binding protein domain gene gene1721 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1695 Sgly_1696 Sgly_1696 Sgly_1696 1722093 1722701 + acyl-phosphate glycerol-3-phosphate acyltransferase COGs: COG0344 membrane protein~HAMAP: Protein of unknown function DUF205~InterPro IPR003811: IPR020788~KEGG: dhd:Dhaf_3380 membrane protein~PFAM: Protein of unknown function DUF205~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Membrane protein YgiH~PFAM: Domain of unknown function (DUF205)~TIGRFAM: acyl-phosphate glycerol 3-phosphate acyltransferase gene gene1722 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1696 Sgly_1697 Sgly_1697 Sgly_1697 1722706 1723716 + glycerol 3-phosphate dehydrogenase (NAD(P)+) COGs: COG0240 Glycerol-3-phosphate dehydrogenase~HAMAP: Glycerol-3-phosphate dehydrogenase [NAD(P)+]~InterPro IPR011128: IPR006109~KEGG: dhd:Dhaf_3379 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase~PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase%2C C-terminal%3B NAD-dependent glycerol-3-phosphate dehydrogenase%2C N-terminal~SPTR: Glycerol-3-phosphate dehydrogenase [NAD(P)+]%3B~PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus%3B NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus gene gene1723 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1697 Sgly_1698 Sgly_1698 Sgly_1698 1723891 1725375 + stage IV sporulation protein A InterPro IPR014201~KEGG: dhd:Dhaf_3378 stage IV sporulation protein A~PFAM: Sporulation stage IV%2C protein A~SPTR: Stage IV sporulation protein A%3B~TIGRFAM: Sporulation stage IV%2C protein A~PFAM: Stage IV sporulation protein A (spore_IV_A)~TIGRFAM: stage IV sporulation protein A gene gene1724 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1698 Sgly_1699 Sgly_1699 Sgly_1699 1725533 1725979 + UPF0735 ACT domain-containing protein COGs: COG4492 ACT domain-containing protein~HAMAP: Ligand-binding-predicted%2C ACT~InterPro IPR008310: IPR002912~KEGG: dhd:Dhaf_3377 hypothetical protein~PFAM: Amino acid-binding ACT~SPTR: Amino acid-binding ACT domain protein gene gene1725 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1699 Sgly_1700 Sgly_1700 Sgly_1700 1726006 1726140 + hypothetical protein gene gene1726 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1700 Sgly_1701 Sgly_1701 Sgly_1701 1726187 1727167 + Mg2 transporter protein CorA family protein COGs: COG0598 Mg2+ and Co2+ transporter~InterPro IPR002523~KEGG: cwo:Cwoe_3190 Mg2 transporter protein CorA family protein~PFAM: Mg2+ transporter protein%2C CorA-like~SPTR: Mg2 transporter protein CorA family protein%3B~PFAM: CorA-like Mg2+ transporter protein~TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) gene gene1727 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1701 Sgly_1702 Sgly_1702 Sgly_1702 1727318 1727857 - GCN5-related N-acetyltransferase COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein~InterPro IPR000182~KEGG: ere:EUBREC_3362 putative acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: GCN5-related N-acetyltransferase%3B~PFAM: Acetyltransferase (GNAT) family gene gene1728 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1702 Sgly_1703 Sgly_1703 Sgly_1703 1728284 1728634 - hypothetical protein KEGG: cce:Ccel_2584 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1730 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1703 Sgly_1704 Sgly_1704 Sgly_1704 1728798 1729601 + protein of unknown function DUF124 COGs: COG2013 conserved hypothetical protein~InterPro IPR002838~KEGG: gyc:GYMC61_0564 protein of unknown function DUF124~PFAM: Protein of unknown function DUF124~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Protein of unknown function DUF124~PFAM: Protein of unknown function DUF124~TIGRFAM: conserved hypothetical protein TIGR00266 gene gene1731 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1704 Sgly_1705 Sgly_1705 Sgly_1705 1729813 1731804 + diguanylate cyclase and metal dependent phosphohydrolase COGs: COG2206 HD-GYP domain~InterPro IPR000014: IPR000160: IPR013656: IPR013655: IPR 006674: IPR001610: IPR003607~KEGG: cbb:CLD_3030 putative sensory box-containing diguanylate cyclase~PFAM: Diguanylate cyclase%2C predicted%3B PAS fold-3%3B PAS fold-4%3B Metal-dependent phosphohydrolase%2C HD subdomain~SMART: Diguanylate cyclase%2C predicted%3B PAS%3B PAC motif%3B Metal-dependent phosphohydrolase%2C HD domain~SPTR: Putative sensory box-containing diguanylate cyclase%3B~TIGRFAM: Diguanylate cyclase%2C predicted%3B PAS~PFAM: HD domain%3B GGDEF domain%3B PAS fold~TIGRFAM: PAS domain S-box%3B uncharacterized domain HDIG%3B diguanylate cyclase (GGDEF) domain gene gene1732 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1705 Sgly_1706 Sgly_1706 Sgly_1706 1731799 1732761 - magnesium and cobalt transport protein CorA COGs: COG0598 Mg2+ and Co2+ transporter~InterPro IPR004488: IPR002523~KEGG: gwc:GWCH70_0933 magnesium and cobalt transport protein CorA~PFAM: Mg2+ transporter protein%2C CorA-like~SPTR: Magnesium and cobalt transport protein CorA%3B~TIGRFAM: Magnesium/cobalt transport protein CorA~PFAM: CorA-like Mg2+ transporter protein~TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) gene gene1733 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1706 Sgly_1707 Sgly_1707 Sgly_1707 1732840 1733469 - Iron sulfur domain-containing%2C CDGSH-type COGs: COG3592 conserved hypothetical protein~InterPro IPR018967: IPR006622~KEGG: mmh:Mmah_0480 protein of unknown function DUF1271~PFAM: Iron sulphur-containing domain%2C CDGSH-type~SPTR: Putative uncharacterized protein%3B~PFAM: Iron-binding zinc finger CDGSH type%3B Protein of unknown function (DUF1271) gene gene1734 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1707 Sgly_1708 Sgly_1708 Sgly_1708 1733592 1733930 + TOPRIM domain-containing protein InterPro IPR006171: IPR006154~KEGG: aac:Aaci_0350 toprim domain protein~PFAM: Toprim domain~SMART: Toprim domain%2C subgroup~SPTR: TOPRIM domain protein%3B~PFAM: Toprim domain gene gene1735 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1708 Sgly_1709 Sgly_1709 Sgly_1709 1734038 1734772 + hypothetical protein KEGG: dhd:Dhaf_3364 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1736 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1709 Sgly_1710 Sgly_1710 Sgly_1710 1734823 1735680 + 4-hydroxybenzoate octaprenyltransferase COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase~InterPro IPR006371: IPR000537~KEGG: pth:PTH_1437 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases~PFAM: UbiA prenyltransferase~SPTR: 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases%3B~TIGRFAM: 4-hydroxybenzoate polyprenyltransferase related~PFAM: UbiA prenyltransferase family~TIGRFAM: putative 4-hydroxybenzoate polyprenyltransferase gene gene1737 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1710 Sgly_1711 Sgly_1711 Sgly_1711 1735736 1736500 + Sec-independent protein translocase TatC COGs: COG0805 Sec-independent protein secretion pathway component TatC~InterPro IPR019822: IPR002033~KEGG: dhd:Dhaf_3363 sec-independent protein translocase%2C TatC subunit~PFAM: Sec-independent periplasmic protein translocase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Twin arginine-targeting protein translocase%2C TatC~PFAM: Sec-independent protein translocase protein (TatC)~TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC gene gene1738 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1711 Sgly_1712 Sgly_1712 Sgly_1712 1736514 1736894 + sec-independent translocation protein mttA/Hcf106 InterPro IPR003369~KEGG: dsy:DSY2233 TatA like protein~PFAM: Bacterial sec-independent translocation protein mttA/Hcf106~SPTR: TatA like protein%3B~PFAM: mttA/Hcf106 family~TIGRFAM: twin arginine-targeting protein translocase TatB gene gene1739 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1712 Sgly_1713 Sgly_1713 Sgly_1713 1736900 1737868 + Trans-hexaprenyltranstransferase COGs: COG0142 Geranylgeranyl pyrophosphate synthase~InterPro IPR000092~KEGG: dsy:DSY2232 hypothetical protein~PFAM: Polyprenyl synthetase~PRIAM: Trans-hexaprenyltranstransferase~SPTR: Putative uncharacterized protein%3B~PFAM: Polyprenyl synthetase~TIGRFAM: heptaprenyl diphosphate synthase component II gene gene1740 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1713 Sgly_1714 Sgly_1714 Sgly_1714 1738035 1738826 + protein of unknown function DUF114 KEGG: dhd:Dhaf_3346 protein of unknown function DUF114~SPTR: Putative uncharacterized protein%3B~PFAM: Serine dehydrogenase proteinase gene gene1741 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1714 Sgly_1715 Sgly_1715 Sgly_1715 1738900 1739109 + twin-arginine translocation protein%2C TatA/E family subunit InterPro IPR006312: IPR003369~KEGG: dhd:Dhaf_3345 twin-arginine translocation protein%2C TatA/E family subunit~PFAM: Bacterial sec-independent translocation protein mttA/Hcf106~SPTR: Twin-arginine translocation protein%2C TatA/E family subunit%3B~TIGRFAM: Twin-arginine translocation protein TatA/E~PFAM: mttA/Hcf106 family~TIGRFAM: twin arginine-targeting protein translocase%2C TatA/E family gene gene1742 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1715 Sgly_1716 Sgly_1716 Sgly_1716 1739271 1740011 + 3-oxoacyl-(acyl-carrier-protein) reductase COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)~InterPro IPR002198~KEGG: dhd:Dhaf_3341 short-chain dehydrogenase/reductase SDR~PFAM: Short-chain dehydrogenase/reductase SDR~PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase~SPTR: Short-chain dehydrogenase/reductase SDR%3B~PFAM: short chain dehydrogenase gene gene1743 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1716 Sgly_1717 Sgly_1717 Sgly_1717 1740215 1740772 - protein of unknown function DUF208 COGs: COG1636 conserved hypothetical protein~InterPro IPR003828~KEGG: bhy:BHWA1_02598 hypothetical protein~PFAM: Protein of unknown function DUF208~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterized BCR%2C COG1636 gene gene1744 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1717 Sgly_1718 Sgly_1718 Sgly_1718 1740840 1742945 + RNA methylase COGs: COG0286 Type I restriction-modification system methyltransferase subunit~InterPro IPR000241~KEGG: bse:Bsel_2967 N-6 DNA methylase~PFAM: Putative RNA methylase~SPTR: N-6 DNA methylase%3B~PFAM: N-6 DNA Methylase gene gene1745 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1718 Sgly_1719 Sgly_1719 Sgly_1719 1743003 1743707 + Tetratricopeptide TPR_1 repeat-containing protein InterPro IPR001440: IPR019734~KEGG: cbf:CLI_3622 TPR repeat-containing protein~PFAM: Tetratricopeptide TPR-1~SMART: Tetratricopeptide repeat~SPTR: TPR Domain protein%3B~PFAM: Tetratricopeptide repeat gene gene1746 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1719 Sgly_1720 Sgly_1720 Sgly_1720 1743726 1744634 + polysaccharide deacetylase COGs: COG0726 xylanase/chitin deacetylase~InterPro IPR002509~KEGG: dhd:Dhaf_3615 polysaccharide deacetylase~PFAM: Polysaccharide deacetylase~SPTR: Putative uncharacterized protein%3B~PFAM: Polysaccharide deacetylase gene gene1747 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1720 Sgly_1721 Sgly_1721 Sgly_1721 1745080 1745394 + hypothetical protein KEGG: tva:TVAG_084890 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1748 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1721 Sgly_1722 Sgly_1722 Sgly_1722 1745678 1745914 + hypothetical protein KEGG: dhd:Dhaf_3807 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1750 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1722 Sgly_1723 Sgly_1723 Sgly_1723 1746007 1746567 + 3-octaprenyl-4-hydroxybenzoate carboxy-lyase COGs: COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase~InterPro IPR004507: IPR003382~KEGG: chy:CHY_0680 putative 3-octaprenyl-4-hydroxybenzoate carboxy-lyase~PFAM: Flavoprotein~SPTR: Putative 3-octaprenyl-4-hydroxybenzoate carboxy-lyase%3B~TIGRFAM: Phenylacrylic acid decarboxylase~PFAM: Flavoprotein~TIGRFAM: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases gene gene1751 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1723 Sgly_1724 Sgly_1724 Sgly_1724 1746618 1746965 - Cupin 2 conserved barrel domain protein COGs: COG1917 conserved hypothetical protein contains double-stranded beta-helix domain~InterPro IPR013096~KEGG: hmo:HM1_2283 hypothetical protein~PFAM: Cupin 2%2C conserved barrel~SPTR: Putative uncharacterized protein%3B~PFAM: Cupin domain gene gene1752 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1724 Sgly_1725 Sgly_1725 Sgly_1725 1747134 1747694 + signal peptidase I COGs: COG0681 Signal peptidase I~InterPro IPR000223: IPR019759~KEGG: dhd:Dhaf_3289 signal peptidase I~PFAM: Peptidase S24/S26A/S26B%2C conserved region~PRIAM: Signal peptidase I~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Peptidase S26A%2C signal peptidase I~PFAM: Peptidase S24-like~TIGRFAM: signal peptidase I%2C bacterial type gene gene1753 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1725 Sgly_1726 Sgly_1726 Sgly_1726 1747707 1749122 + protein of unknown function DUF815 COGs: COG2607 ATPase (AAA+ superfamily)~InterPro IPR008533~KEGG: dhd:Dhaf_3284 protein of unknown function DUF815~PFAM: Protein of unknown function DUF815~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF815) gene gene1754 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1726 Sgly_1727 Sgly_1727 Sgly_1727 1749136 1750230 - hypothetical protein COGs: COG2006 conserved hypothetical protein~KEGG: csc:Csac_1323 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Domain of unknown function (DUF362) gene gene1755 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1727 Sgly_1728 Sgly_1728 Sgly_1728 1750398 1752434 + diguanylate cyclase and metal dependent phosphohydrolase COGs: COG2206 HD-GYP domain~InterPro IPR000014: IPR000160: IPR013767: IPR006674: IPR 003607~KEGG: swo:Swol_1469 HD-GYP domain-containing protein~PFAM: Diguanylate cyclase%2C predicted%3B PAS fold%3B Metal-dependent phosphohydrolase%2C HD subdomain~SMART: Diguanylate cyclase%2C predicted%3B Metal-dependent phosphohydrolase%2C HD domain~SPTR: Diguanylate cyclase with PAS/PAC and GAF sensors%3B~TIGRFAM: Diguanylate cyclase%2C predicted%3B PAS~PFAM: HD domain%3B GGDEF domain%3B PAS fold~TIGRFAM: PAS domain S-box%3B diguanylate cyclase (GGDEF) domain gene gene1756 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1728 Sgly_1729 Sgly_1729 Sgly_1729 1752468 1753367 - pseudouridine synthase%2C RluA family COGs: COG0564 Pseudouridylate synthase 23S RNA-specific~InterPro IPR006225: IPR006145~KEGG: dhd:Dhaf_2390 pseudouridine synthase%2C RluA family~PFAM: Pseudouridine synthase%2C RsuA and RluB/C/D/E/F~SPTR: Pseudouridine synthase%3B~TIGRFAM: Pseudouridine synthase%2C RluC/RluD~PFAM: RNA pseudouridylate synthase~TIGRFAM: pseudouridine synthase%2C RluA family gene gene1757 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1729 Sgly_1730 Sgly_1730 Sgly_1730 1753494 1754609 + peptidase M29 aminopeptidase II COGs: COG2309 Leucyl aminopeptidase (aminopeptidase T)~InterPro IPR000787~KEGG: dhd:Dhaf_2391 putative aminopeptidase~PFAM: Peptidase M29%2C aminopeptidase II~SPTR: Putative uncharacterized protein%3B~PFAM: Thermophilic metalloprotease (M29) gene gene1758 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1730 Sgly_1731 Sgly_1731 Sgly_1731 1754636 1755574 + Glyoxylate reductase (NADP(+)) COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase~InterPro IPR006139: IPR006140~KEGG: toc:Toce_1780 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD-binding%3B D-isomer specific 2-hydroxyacid dehydrogenase%2C catalytic domain~PRIAM: Glyoxylate reductase (NADP(+))~SPTR: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein%3B~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain%3B D-isomer specific 2-hydroxyacid dehydrogenase%2C catalytic domain gene gene1759 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1731 Sgly_1732 Sgly_1732 Sgly_1732 1755571 1757172 + tRNA cytidylyltransferase COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase~InterPro IPR002646~KEGG: dhd:Dhaf_2393 polynucleotide adenylyltransferase region~PFAM: Poly A polymerase%2C head domain~PRIAM: tRNA cytidylyltransferase~SPTR: Polynucleotide adenylyltransferase region%3B~PFAM: Poly A polymerase head domain gene gene1760 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1732 Sgly_1733 Sgly_1733 Sgly_1733 1757165 1758328 - Aspartate transaminase COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase~InterPro IPR004839~KEGG: dhd:Dhaf_2403 aminotransferase class I and II~PFAM: Aminotransferase%2C class I/II~PRIAM: Aspartate transaminase~SPTR: Putative uncharacterized protein%3B~PFAM: Aminotransferase class I and II gene gene1761 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1733 Sgly_1734 Sgly_1734 Sgly_1734 1758325 1758819 - transcriptional regulator%2C AsnC family COGs: COG1522 Transcriptional regulators~InterPro IPR019887: IPR019888~KEGG: dhd:Dhaf_2404 transcriptional regulator%2C AsnC family~PFAM: Transcription regulator AsnC-type%2C C-terminal~SMART: Transcription regulator AsnC-type~SPTR: Putative uncharacterized protein%3B~PFAM: AsnC family gene gene1762 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1734 Sgly_1735 Sgly_1735 Sgly_1735 1759007 1759561 + hypothetical protein KEGG: ptm:GSPATT00001072001 hypothetical protein~SPTR: Chromosome undetermined scaffold_2%2C whole genome shotgun sequence gene gene1763 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1735 Sgly_1736 Sgly_1736 Sgly_1736 1759558 1761213 - CoA-disulfide reductase COGs: COG0446 NAD(FAD)-dependent dehydrogenase~InterPro IPR013027: IPR004099: IPR001763~KEGG: ttm:Tthe_0249 FAD-dependent pyridine nucleotide-disulphide oxidoreductase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B Pyridine nucleotide-disulphide oxidoreductase%2C dimerisation%3B Rhodanese-like~PRIAM: CoA-disulfide reductase~SMART: Rhodanese-like~SPTR: Putative uncharacterized protein%3B~PFAM: Pyridine nucleotide-disulphide oxidoreductase%3B Pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain%3B Rhodanese-like domain gene gene1764 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1736 Sgly_1737 Sgly_1737 Sgly_1737 1761349 1763265 - aconitase COGs: COG1048 Aconitase A~InterPro IPR006250: IPR001030: IPR000573~KEGG: tjr:TherJR_2355 aconitate hydratase~PFAM: Aconitase/3-isopropylmalate dehydratase large subunit%2C alpha/beta/alpha%3B Aconitase A/isopropylmalate dehydratase small subunit%2C swivel~SPTR: Aconitate hydratase%3B~TIGRFAM: Aconitase%2C putative~PFAM: Aconitase C-terminal domain%3B Aconitase family (aconitate hydratase)~TIGRFAM: aconitate hydratase%2C putative%2C Aquifex type gene gene1765 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1737 Sgly_1738 Sgly_1738 Sgly_1738 1763415 1763582 + hypothetical protein KEGG: pcb:PC000666.04.0 hypothetical protein~SPTR: Polysaccharide biosynthesis protein gene gene1766 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1738 Sgly_1739 Sgly_1739 Sgly_1739 1763620 1764090 + tRNA/rRNA methyltransferase (SpoU) COGs: COG0219 rRNA methylase (SpoU class)~InterPro IPR001537~KEGG: dhd:Dhaf_2405 tRNA/rRNA methyltransferase (SpoU)~PFAM: tRNA/rRNA methyltransferase%2C SpoU~SPTR: Putative uncharacterized protein%3B~PFAM: SpoU rRNA Methylase family~TIGRFAM: rRNA methylase%2C putative%2C group 2 gene gene1767 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1739 Sgly_1740 Sgly_1740 Sgly_1740 1764116 1765171 + Glycosyl transferase%2C family 4%2C conserved region-containing protein COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase~InterPro IPR018481~KEGG: dhd:Dhaf_2406 glycosyl transferase family 4~PFAM: Glycosyl transferase%2C family 4%2C conserved region~SPTR: Putative uncharacterized protein%3B~PFAM: Glycosyl transferase family 4 gene gene1768 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1740 Sgly_1741 Sgly_1741 Sgly_1741 1765218 1765916 + UPF0173 metal-dependent hydrolase COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold~HAMAP: UPF0173 metal-dependent hydrolase~KEGG: dhd:Dhaf_2407 beta-lactamase domain protein~SPTR: Beta-lactamase domain protein%3B~PFAM: Metallo-beta-lactamase superfamily gene gene1769 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1741 Sgly_1742 Sgly_1742 Sgly_1742 1766262 1766429 + hypothetical protein KEGG: tva:TVAG_043040 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1770 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1742 Sgly_1743 Sgly_1743 Sgly_1743 1766564 1770037 + DNA polymerase III catalytic subunit%2C DnaE type COGs: COG0587 DNA polymerase III alpha subunit~InterPro IPR004805: IPR004013: IPR011708: IPR004365: IPR 003141~KEGG: dsy:DSY1312 hypothetical protein~PFAM: Bacterial DNA polymerase III%2C alpha subunit%3B PHP%2C C-terminal%3B Nucleic acid binding%2C OB-fold%2C tRNA/helicase-type~PRIAM: DNA-directed DNA polymerase~SMART: Polymerase/histidinol phosphatase%2C N-terminal~SPTR: Putative uncharacterized protein%3B~TIGRFAM: DNA polymerase III%2C alpha subunit~PFAM: Bacterial DNA polymerase III alpha subunit%3B PHP domain%3B OB-fold nucleic acid binding domain~TIGRFAM: DNA-directed DNA polymerase III (polc) gene gene1771 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1743 Sgly_1744 Sgly_1744 Sgly_1744 1770097 1770573 + Phosphopantetheine adenylyltransferase COGs: COG0669 Phosphopantetheine adenylyltransferase~HAMAP: Coenzyme A biosynthesis protein~InterPro IPR001980: IPR004821: IPR004820~KEGG: dsy:DSY1313 phosphopantetheine adenylyltransferase~PFAM: Cytidylyltransferase~PRIAM: Pantetheine-phosphate adenylyltransferase~SPTR: Phosphopantetheine adenylyltransferase%3B~TIGRFAM: Coenzyme A biosynthesis protein%3B Cytidyltransferase-related~PFAM: Cytidylyltransferase~TIGRFAM: pantetheine-phosphate adenylyltransferase%2C bacterial%3B cytidyltransferase-related domain gene gene1772 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1744 Sgly_1745 Sgly_1745 Sgly_1745 1770607 1770810 + hypothetical protein KEGG: dhd:Dhaf_2412 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1773 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1745 Sgly_1746 Sgly_1746 Sgly_1746 1770986 1771579 + hypothetical protein KEGG: gct:GC56T3_1789 hypothetical protein~SPTR: Putative uncharacterized protein GK1753 gene gene1774 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1746 Sgly_1747 Sgly_1747 Sgly_1747 1771712 1772095 + transcriptional regulator%2C GntR family COGs: COG1725 transcriptional regulator protein~InterPro IPR000524~KEGG: dsy:DSY0341 hypothetical protein~PFAM: HTH transcriptional regulator%2C GntR~SPTR: Putative uncharacterized protein gene gene1775 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1747 Sgly_1748 Sgly_1748 Sgly_1748 1772092 1772994 + ABC transporter related protein COGs: COG1131 ABC-type multidrug transport system ATPase component~InterPro IPR003439: IPR003593~KEGG: dsy:DSY0342 hypothetical protein~PFAM: ABC transporter-like~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related protein%3B~PFAM: ABC transporter gene gene1776 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1748 Sgly_1749 Sgly_1749 Sgly_1749 1772975 1773688 + hypothetical protein KEGG: amt:Amet_1847 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1777 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1749 Sgly_1750 Sgly_1750 Sgly_1750 1773688 1774434 + hypothetical protein KEGG: taf:THA_263 methyl-accepting chemotaxis protein~SPTR: Putative uncharacterized protein gene gene1778 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1750 Sgly_1751 Sgly_1751 Sgly_1751 1774762 1775343 + transcriptional regulator%2C TetR family COGs: COG1309 Transcriptional regulator~InterPro IPR001647~KEGG: cbb:CLD_0061 transcriptional regulator~PFAM: Transcription regulator%2C TetR-like%2C DNA-binding%2C bacterial/archaeal~SPTR: Transcriptional regulator%3B~PFAM: Bacterial regulatory proteins%2C tetR family gene gene1780 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1751 Sgly_1752 Sgly_1752 Sgly_1752 1775556 1776077 + hypothetical protein KEGG: ckr:CKR_0541 hypothetical protein~SPTR: Metal dependent phophohydrolase gene gene1781 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1752 Sgly_1753 Sgly_1753 Sgly_1753 1776043 1776885 + protein of unknown function DUF1113 COGs: COG4905 membrane protein~InterPro IPR010540~KEGG: cpf:CPF_1398 hypothetical protein~PFAM: Protein of unknown function DUF1113~SPTR: Putative membrane protein%3B~PFAM: Protein of unknown function (DUF1113) gene gene1782 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1753 Sgly_1754 Sgly_1754 Sgly_1754 1776903 1777007 + hypothetical protein gene gene1783 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1754 Sgly_1755 Sgly_1755 Sgly_1755 1777171 1777638 + hypothetical protein KEGG: dhd:Dhaf_0967 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1784 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1755 Sgly_1756 Sgly_1756 Sgly_1756 1778077 1779267 + peptidoglycan-binding LysM KEGG: dhd:Dhaf_2273 peptidoglycan-binding LysM~SPTR: Putative uncharacterized protein gene gene1785 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1756 Sgly_1757 Sgly_1757 Sgly_1757 1779857 1780687 - Peptidase M23 COGs: COG0739 Membrane protein related to metalloendopeptidase~InterPro IPR016047~KEGG: dsy:DSY1575 hypothetical protein~PFAM: Peptidase M23~SPTR: Putative uncharacterized protein%3B~PFAM: Peptidase family M23 gene gene1786 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1757 Sgly_1758 Sgly_1758 Sgly_1758 1780925 1781227 - Peptidoglycan-binding lysin domain protein InterPro IPR018392: IPR002482~KEGG: cmi:CMM_2017 hypothetical protein~PFAM: Peptidoglycan-binding lysin domain~SMART: Peptidoglycan-binding Lysin subgroup~SPTR: Conserved ypothetical protein%3B~PFAM: LysM domain gene gene1787 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1758 Sgly_1759 Sgly_1759 Sgly_1759 1781370 1781984 + SOS-response transcriptional repressor%2C LexA COGs: COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidase)~HAMAP: Peptidase S24%2C LexA repressor~InterPro IPR006200: IPR006199: IPR019759~KEGG: dhd:Dhaf_2719 SOS-response transcriptional repressor%2C LexA~PFAM: LexA%2C DNA-binding domain%3B Peptidase S24/S26A/S26B%2C conserved region~SPTR: LexA repressor%3B~TIGRFAM: Peptidase S24%2C LexA repressor~PFAM: LexA DNA binding domain%3B Peptidase S24-like~TIGRFAM: SOS regulatory protein LexA gene gene1788 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1759 Sgly_1760 Sgly_1760 Sgly_1760 1781981 1783063 - D-alanine--D-alanine ligase COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein~HAMAP: D-alanine--D-alanine ligase~InterPro IPR005905: IPR011127: IPR011095~KEGG: dsy:DSY1579 D-alanyl-alanine synthetase A~PFAM: D-alanine--D-alanine ligase%2C C-terminal%3B D-alanine--D-alanine ligase%2C N-terminal~PRIAM: D-alanine--D-alanine ligase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: D-alanine--D-alanine ligase~PFAM: D-ala D-ala ligase C-terminus%3B D-ala D-ala ligase N-terminus~TIGRFAM: D-alanine--D-alanine ligase gene gene1789 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1760 Sgly_1761 Sgly_1761 Sgly_1761 1783128 1783652 - signal peptidase I InterPro IPR000223: IPR019759~KEGG: dhd:Dhaf_2722 signal peptidase I~PFAM: Peptidase S24/S26A/S26B%2C conserved region~SPTR: Signal peptidase I%3B~TIGRFAM: Peptidase S26A%2C signal peptidase I~PFAM: Peptidase S24-like~TIGRFAM: signal peptidase I%2C bacterial type gene gene1790 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1761 Sgly_1762 Sgly_1762 Sgly_1762 1783660 1784925 - aluminum resistance family protein COGs: COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance~InterPro IPR009651~KEGG: dhd:Dhaf_2723 aluminium resistance family protein~PFAM: Aluminium resistance~SPTR: Aluminium resistance family protein%3B~PFAM: Aluminium resistance protein gene gene1791 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1762 Sgly_1763 Sgly_1763 Sgly_1763 1785098 1785991 - AAA ATPase central domain protein COGs: COG0464 ATPase of the AAA+ class~InterPro IPR003959: IPR003593~KEGG: dhd:Dhaf_2725 AAA ATPase central domain protein~PFAM: ATPase%2C AAA-type%2C core~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ATPase family associated with various cellular activities (AAA)~TIGRFAM: probable Rubsico expression protein CbbX%3B stage V sporulation protein K gene gene1792 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1763 Sgly_1764 Sgly_1764 Sgly_1764 1786090 1787298 + protein of unknown function DUF401 COGs: COG1906 conserved hypothetical protein~InterPro IPR007294~KEGG: gsu:GSU1012 hypothetical protein~PFAM: Protein of unknown function DUF401~SPTR: Membrane protein%2C putative%3B~PFAM: Protein of unknown function (DUF401)~TIGRFAM: converved hypothetical integral membrane protein gene gene1793 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1764 Sgly_1765 Sgly_1765 Sgly_1765 1787413 1787664 - RNA-binding protein Hfq COGs: COG1923 Uncharacterized host factor I protein~HAMAP: Protein hfq~InterPro IPR005001: IPR001163~KEGG: dsy:DSY1586 hypothetical protein~PFAM: Like-Sm ribonucleoprotein (LSM) domain~SPTR: Protein hfq%3B~TIGRFAM: Host factor Hfq~PFAM: LSM domain~TIGRFAM: RNA chaperone Hfq gene gene1794 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1765 Sgly_1766 Sgly_1766 Sgly_1766 1787700 1788647 - tRNA dimethylallyltransferase COGs: COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase~HAMAP: tRNA delta(2)-isopentenylpyrophosphate transferase~InterPro IPR018022: IPR002627~KEGG: dsy:DSY1587 hypothetical protein~PFAM: tRNA isopentenyltransferase~PRIAM: tRNA isopentenyltransferase~SPTR: tRNA dimethylallyltransferase%3B~TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase~PFAM: IPP transferase~TIGRFAM: tRNA isopentenyltransferase (miaA) gene gene1795 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1766 Sgly_1767 Sgly_1767 Sgly_1767 1788662 1789483 - hypothetical protein KEGG: dsy:DSY1588 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF548) gene gene1796 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1767 Sgly_1768 Sgly_1768 Sgly_1768 1789484 1791475 - DNA mismatch repair protein mutL COGs: COG0323 DNA mismatch repair enzyme (predicted ATPase)~HAMAP: DNA mismatch repair protein%2C MutL~InterPro IPR020667: IPR014763: IPR003594: IPR013507: IPR 014790~KEGG: dae:Dtox_2128 DNA mismatch repair protein~PFAM: MutL%2C C-terminal%2C dimerisation%3B DNA mismatch repair protein%2C C-terminal%3B ATPase-like%2C ATP-binding domain~SPTR: DNA mismatch repair protein mutL%3B~TIGRFAM: DNA mismatch repair protein%2C N-terminal~PFAM: Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B MutL C terminal dimerisation domain%3B DNA mismatch repair protein%2C C-terminal domain~TIGRFAM: DNA mismatch repair protein MutL gene gene1797 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1768 Sgly_1769 Sgly_1769 Sgly_1769 1791459 1792814 - histone deacetylase superfamily COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein~InterPro IPR000286~KEGG: dsy:DSY1590 hypothetical protein~PFAM: Histone deacetylase superfamily~SPTR: Putative uncharacterized protein%3B~PFAM: Histone deacetylase domain gene gene1798 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1769 Sgly_1770 Sgly_1770 Sgly_1770 1792807 1794492 - Hydantoinase/oxoprolinase COGs: COG0145 N-methylhydantoinase A/acetone carboxylase beta subunit~InterPro IPR008040: IPR002821~KEGG: dhd:Dhaf_2734 hydantoinase/oxoprolinase~PFAM: Hydantoinase/oxoprolinase%3B Hydantoinaseoxoprolinase%2C N-terminal~SPTR: Hydantoinase/oxoprolinase%3B~PFAM: Hydantoinase/oxoprolinase%3B Hydantoinase/oxoprolinase N-terminal region gene gene1799 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1770 Sgly_1771 Sgly_1771 Sgly_1771 1794528 1797089 - DNA mismatch repair protein MutS COGs: COG0249 Mismatch repair ATPase (MutS family)~HAMAP: DNA mismatch repair protein MutS%2C type 1~InterPro IPR005748: IPR007695: IPR007860: IPR007696: IPR 007861: IPR000432~KEGG: dhd:Dhaf_2735 DNA mismatch repair protein MutS~PFAM: DNA mismatch repair protein MutS%2C C-terminal%3B DNA mismatch repair protein MutS%2C core%3B DNA mismatch repair protein MutS-like%2C N-terminal%3B DNA mismatch repair protein MutS%2C connector%3B DNA mismatch repair protein MutS%2C clamp~SMART: DNA mismatch repair protein MutS%2C C-terminal%3B DNA mismatch repair protein MutS%2C core~SPTR: DNA mismatch repair protein mutS%3B~TIGRFAM: DNA mismatch repair protein MutS%2C type 1~PFAM: MutS family domain IV%3B MutS domain II%3B MutS domain V%3B MutS domain I%3B MutS domain III~TIGRFAM: DNA mismatch repair protein MutS gene gene1800 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1771 Sgly_1772 Sgly_1772 Sgly_1772 1797306 1797953 - hypothetical protein KEGG: pjd:Pjdr2_5037 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1801 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1772 Sgly_1773 Sgly_1773 Sgly_1773 1798092 1798538 - protein of unknown function DUF964 KEGG: aar:Acear_1155 protein of unknown function DUF964~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF964) gene gene1802 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1773 Sgly_1774 Sgly_1774 Sgly_1774 1798630 1799958 - tRNA-i(6)A37 thiotransferase enzyme MiaB COGs: COG0621 2-methylthioadenine synthetase~HAMAP: tRNA-i(6)A37 modification enzyme MiaB~InterPro IPR006463: IPR005839: IPR013848: IPR007197: IPR 002792: IPR006638~KEGG: dsy:DSY1595 (dimethylallyl)adenosine tRNA methylthiotransferase~PFAM: Methylthiotransferase%2C N-terminal%3B Radical SAM%3B Deoxyribonuclease/rho motif-related TRAM~SMART: Elongator protein 3/MiaB/NifB~SPTR: (Dimethylallyl)adenosine tRNA methylthiotransferase miaB%3B~TIGRFAM: Methylthiotransferase%3B tRNA-i(6)A37 modification enzyme MiaB~PFAM: TRAM domain%3B Radical SAM superfamily%3B Uncharacterized protein family UPF0004~TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB%3B RNA modification enzyme%2C MiaB family gene gene1803 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1774 Sgly_1775 Sgly_1775 Sgly_1775 1800082 1800918 - degV family protein COGs: COG1307 conserved hypothetical protein~InterPro IPR003797~KEGG: dhd:Dhaf_2746 DegV family protein~PFAM: DegV~SPTR: DegV family protein%3B~TIGRFAM: DegV~PFAM: Uncharacterised protein%2C DegV family COG1307~TIGRFAM: EDD domain protein%2C DegV family gene gene1804 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1775 Sgly_1776 Sgly_1776 Sgly_1776 1800980 1802059 - cobyrinic acid ac-diamide synthase COGs: COG0455 ATPase involved in chromosome partitioning~KEGG: nth:Nther_1764 cobyrinic acid ac-diamide synthase~SPTR: Cobyrinic acid ac-diamide synthase%3B~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain gene gene1805 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1776 Sgly_1777 Sgly_1777 Sgly_1777 1802187 1803914 - pyruvate kinase COGs: COG0469 Pyruvate kinase~InterPro IPR001697: IPR015793: IPR015794: IPR008279~KEGG: dhd:Dhaf_2755 pyruvate kinase~PFAM: Pyruvate kinase%2C barrel%3B Pyruvate kinase%2C alpha/beta%3B PEP-utilising enzyme%2C mobile domain~PRIAM: Pyruvate kinase.%2C Pyruvate%2C water dikinase~SPTR: Pyruvate kinase%3B~TIGRFAM: Pyruvate kinase~PFAM: Pyruvate kinase%2C barrel domain%3B PEP-utilising enzyme%2C mobile domain%3B Pyruvate kinase%2C alpha/beta domain~TIGRFAM: pyruvate kinase gene gene1806 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1777 Sgly_1778 Sgly_1778 Sgly_1778 1803943 1804956 - glyceraldehyde-3-phosphate dehydrogenase COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase~InterPro IPR006424: IPR020828: IPR020829~KEGG: dhd:Dhaf_2756 glyceraldehyde-3-phosphate dehydrogenase%2C type I~PFAM: Glyceraldehyde 3-phosphate dehydrogenase%2C NAD(P) binding domain%3B Glyceraldehyde 3-phosphate dehydrogenase%2C catalytic domain~PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)~SPTR: Glyceraldehyde 3-phosphate dehydrogenase%3B~TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase%2C type I~PFAM: Glyceraldehyde 3-phosphate dehydrogenase%2C C-terminal domain%3B Glyceraldehyde 3-phosphate dehydrogenase%2C NAD binding domain~TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase%2C type I gene gene1807 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1778 Sgly_1779 Sgly_1779 Sgly_1779 1805083 1806309 - precorrin-6Y C5%2C15-methyltransferase (decarboxylating)%2C CbiT subunit COGs: COG2242 Precorrin-6B methylase 2~InterPro IPR014008: IPR000878~KEGG: dhd:Dhaf_1296 precorrin-6y C5%2C15-methyltransferase (decarboxylating)%2C CbiE subunit~PFAM: Tetrapyrrole methylase~SPTR: Precorrin-6Y C(5%2C15)-methyltransferase%3B~TIGRFAM: Cobalamin (vitamin B12) biosynthesis CbiT%2C precorrin-6Y methyltransferase-core~PFAM: Methyltransferase small domain%3B Tetrapyrrole (Corrin/Porphyrin) Methylases~TIGRFAM: precorrin-6Y C5%2C15-methyltransferase (decarboxylating)%2C CbiT subunit%3B precorrin-6y C5%2C15-methyltransferase (decarboxylating)%2C CbiE subunit gene gene1808 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1779 Sgly_1780 Sgly_1780 Sgly_1780 1806360 1807112 - 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase COGs: COG1691 NCAIR mutase (PurE)-related protein~InterPro IPR000031~KEGG: chy:CHY_1282 hypothetical protein~PFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase~SPTR: Putative uncharacterized protein%3B~PFAM: AIR carboxylase gene gene1809 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1780 Sgly_1781 Sgly_1781 Sgly_1781 1807109 1808116 - Cellulase COGs: COG1363 Cellulase M and related protein~InterPro IPR008007~KEGG: dhd:Dhaf_2766 peptidase M42 family protein~PFAM: Peptidase M42~PRIAM: Cellulase~SPTR: Putative uncharacterized protein%3B~PFAM: M42 glutamyl aminopeptidase gene gene1810 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1781 Sgly_1782 Sgly_1782 Sgly_1782 1808095 1809141 - Cellulase COGs: COG1363 Cellulase M and related protein~InterPro IPR008007~KEGG: dhd:Dhaf_2767 peptidase M42 family protein~PFAM: Peptidase M42~PRIAM: Cellulase~SPTR: Putative uncharacterized protein%3B~PFAM: M42 glutamyl aminopeptidase gene gene1811 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1782 Sgly_1783 Sgly_1783 Sgly_1783 1809132 1810190 - Cellulase COGs: COG1363 Cellulase M and related protein~InterPro IPR008007~KEGG: dhd:Dhaf_2768 peptidase M42 family protein~PFAM: Peptidase M42~PRIAM: Cellulase~SPTR: Putative uncharacterized protein%3B~PFAM: M42 glutamyl aminopeptidase gene gene1812 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1783 Sgly_1784 Sgly_1784 Sgly_1784 1810261 1812207 - Peptidoglycan glycosyltransferase COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2~InterPro IPR005311: IPR001460: IPR005543~KEGG: dhd:Dhaf_2771 peptidoglycan glycosyltransferase~PFAM: Penicillin-binding protein%2C transpeptidase%3B Penicillin-binding protein%2C dimerisation domain%3B PASTA~PRIAM: Peptidoglycan glycosyltransferase~SMART: PASTA~SPTR: Putative uncharacterized protein%3B~PFAM: Penicillin binding protein transpeptidase domain%3B Penicillin-binding Protein dimerisation domain%3B PASTA domain gene gene1813 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1784 Sgly_1785 Sgly_1785 Sgly_1785 1812254 1812382 - hypothetical protein gene gene1814 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1785 Sgly_1786 Sgly_1786 Sgly_1786 1812428 1812997 - Rhomboid family protein COGs: COG0705 membrane protein~InterPro IPR002610~KEGG: dhd:Dhaf_2772 rhomboid family protein~PFAM: Peptidase S54%2C rhomboid~SPTR: Putative uncharacterized protein%3B~PFAM: Rhomboid family gene gene1815 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1786 Sgly_1787 Sgly_1787 Sgly_1787 1813009 1813926 - thioredoxin reductase (NADPH) COGs: COG0492 Thioredoxin reductase~InterPro IPR005982: IPR013027~KEGG: mta:Moth_2420 thioredoxin reductase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~PRIAM: Thioredoxin-disulfide reductase~SPTR: Thioredoxin reductase%3B~TIGRFAM: Thioredoxin reductase~PFAM: Pyridine nucleotide-disulphide oxidoreductase~TIGRFAM: thioredoxin-disulfide reductase gene gene1816 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1787 Sgly_1788 Sgly_1788 Sgly_1788 1814075 1816789 + UPF0182 protein COGs: COG1615 conserved hypothetical protein~HAMAP: Uncharacterised protein family UPF0182~InterPro IPR005372~KEGG: dsy:DSY1630 hypothetical protein~PFAM: Uncharacterised protein family UPF0182~SPTR: UPF0182 protein DSY1630%3B~PFAM: Uncharacterised protein family (UPF0182) gene gene1817 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1788 Sgly_1789 Sgly_1789 Sgly_1789 1816866 1817444 - response regulator receiver and ANTAR domain protein COGs: COG3707 Response regulator with putative antiterminator output domain~InterPro IPR001789: IPR005561~KEGG: sti:Sthe_1603 response regulator receiver and ANTAR domain protein~PFAM: ANTAR%3B Signal transduction response regulator%2C receiver domain~SPTR: Response regulator receiver and ANTAR domain protein%3B~PFAM: Response regulator receiver domain%3B ANTAR domain gene gene1818 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1789 Sgly_1790 Sgly_1790 Sgly_1790 1817691 1818245 - hypothetical protein KEGG: dhd:Dhaf_2784 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1819 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1790 Sgly_1791 Sgly_1791 Sgly_1791 1818360 1819085 - replicative DNA helicase loader DnaI COGs: COG1484 DNA replication protein~InterPro IPR003959: IPR003593~KEGG: dhd:Dhaf_2785 IstB domain protein ATP-binding protein~PFAM: ATPase%2C AAA-type%2C core~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: IstB-like ATP binding protein gene gene1820 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1791 Sgly_1792 Sgly_1792 Sgly_1792 1819151 1819894 - primosome%2C DnaD subunit COGs: COG3935 Putative primosome component and related protein~InterPro IPR006343~KEGG: dhd:Dhaf_2786 primosome%2C DnaD subunit~SPTR: Putative uncharacterized protein%3B~TIGRFAM: DnaD/phage-associated domain~PFAM: Replication initiation and membrane attachment protein (DnaB)~TIGRFAM: DnaD and phage-associated domain gene gene1821 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1792 Sgly_1793 Sgly_1793 Sgly_1793 1820080 1820670 + metal-dependent phosphohydrolase HD sub domain protein InterPro IPR006674: IPR003607~KEGG: dhd:Dhaf_2787 metal dependent phosphohydrolase~PFAM: Metal-dependent phosphohydrolase%2C HD subdomain~SMART: Metal-dependent phosphohydrolase%2C HD domain~SPTR: Putative uncharacterized protein%3B~PFAM: HD domain~TIGRFAM: uncharacterized domain HDIG gene gene1822 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1793 Sgly_1794 Sgly_1794 Sgly_1794 1820672 1822336 - RNA-metabolising metallo-beta-lactamase COGs: COG1236 exonuclease of the beta-lactamase fold involved in RNA processing~InterPro IPR011108~KEGG: dhd:Dhaf_2788 beta-lactamase domain protein~PFAM: RNA-metabolising metallo-beta-lactamase~SPTR: Putative uncharacterized protein%3B~PFAM: Metallo-beta-lactamase superfamily%3B RNA-metabolising metallo-beta-lactamase%3B Beta-Casp domain gene gene1823 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1794 Sgly_1795 Sgly_1795 Sgly_1795 1822435 1823073 - two component transcriptional regulator%2C LuxR family COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain~InterPro IPR001789: IPR000792~KEGG: dhd:Dhaf_2789 two component transcriptional regulator%2C LuxR family~PFAM: Signal transduction response regulator%2C receiver domain%3B Transcription regulator LuxR%2C C-terminal~SMART: Signal transduction response regulator%2C receiver domain%3B Transcription regulator LuxR%2C C-terminal~SPTR: Putative uncharacterized protein%3B~PFAM: Response regulator receiver domain%3B Bacterial regulatory proteins%2C luxR family gene gene1824 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1795 Sgly_1796 Sgly_1796 Sgly_1796 1823066 1824208 - DegS sensor signal transduction histidine kinase COGs: COG4585 Signal transduction histidine kinase~InterPro IPR008595: IPR011712: IPR003594~KEGG: dhd:Dhaf_2790 sensor DegS domain protein~PFAM: Sensor DegS%3B Signal transduction histidine kinase%2C subgroup 3%2C dimerisation and phosphoacceptor domain%3B ATPase-like%2C ATP-binding domain~SPTR: Putative uncharacterized protein%3B~PFAM: Histidine kinase%3B Sensor protein DegS%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase gene gene1825 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1796 Sgly_1797 Sgly_1797 Sgly_1797 1824509 1825033 + GCN5-related N-acetyltransferase COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein~InterPro IPR000182~KEGG: dhd:Dhaf_2807 GCN5-related N-acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: Putative uncharacterized protein%3B~PFAM: Acetyltransferase (GNAT) family gene gene1827 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1797 Sgly_1798 Sgly_1798 Sgly_1798 1825258 1826454 + diaminohydroxyphosphoribosylaminopyrimidine deaminase%3B 5-amino-6-(5-phosphoribosylamino)uracil reductase COGs: COG0117 Pyrimidine deaminase~InterPro IPR004794: IPR011549: IPR002125: IPR002734~KEGG: dhd:Dhaf_2808 riboflavin biosynthesis protein RibD~PFAM: Bacterial bifunctional deaminase-reductase%2C C-terminal%3B CMP/dCMP deaminase%2C zinc-binding~PRIAM: Diaminohydroxyphosphoribosylaminopyrimidine deaminase.%2C 5-amino-6-(5-phosphoribosylamino)uracil reductase~SPTR: Riboflavin biosynthesis protein RibD%3B~TIGRFAM: Riboflavin biosynthesis protein RibD%3B Riboflavin-specific deaminase%2C C-terminal~PFAM: RibD C-terminal domain%3B Cytidine and deoxycytidylate deaminase zinc-binding region~TIGRFAM: riboflavin-specific deaminase C-terminal domain%3B riboflavin biosynthesis protein RibD gene gene1828 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1798 Sgly_1799 Sgly_1799 Sgly_1799 1826474 1827130 + riboflavin synthase%2C alpha subunit COGs: COG0307 Riboflavin synthase alpha chain~InterPro IPR001783~KEGG: dsy:DSY1663 riboflavin synthase subunit alpha~PFAM: Lumazine-binding protein~PRIAM: Riboflavin synthase~SPTR: Riboflavin synthase alpha chain%3B~TIGRFAM: Lumazine-binding protein~PFAM: Lumazine binding domain~TIGRFAM: riboflavin synthase%2C alpha subunit gene gene1829 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1799 Sgly_1800 Sgly_1800 Sgly_1800 1827145 1828362 + 3%2C4-dihydroxy-2-butanone 4-phosphate synthase COGs: COG0108 3 4-dihydroxy-2-butanone 4-phosphate synthase~HAMAP: DHBP synthase RibB%3B GTP cyclohydrolase II~InterPro IPR000926: IPR000422~KEGG: dsy:DSY1664 GTP cyclohydrolase II~PFAM: DHBP synthase RibB%3B GTP cyclohydrolase II~SPTR: GTP cyclohydrolase II%3B~TIGRFAM: GTP cyclohydrolase II%3B DHBP synthase RibB~PFAM: GTP cyclohydrolase II%3B 3%2C4-dihydroxy-2-butanone 4-phosphate synthase~TIGRFAM: GTP cyclohydrolase II%3B 3%2C4-dihydroxy-2-butanone 4-phosphate synthase gene gene1830 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1800 Sgly_1801 Sgly_1801 Sgly_1801 1828411 1828875 + 6%2C7-dimethyl-8-ribityllumazine synthase COGs: COG0054 Riboflavin synthase beta-chain~HAMAP: 6%2C7-dimethyl-8-ribityllumazine synthase~InterPro IPR002180~KEGG: dhd:Dhaf_2811 6%2C7-dimethyl-8-ribityllumazine synthase~PFAM: 6%2C7-dimethyl-8-ribityllumazine synthase~SPTR: 6%2C7-dimethyl-8-ribityllumazine synthase%3B~TIGRFAM: 6%2C7-dimethyl-8-ribityllumazine synthase~PFAM: 6%2C7-dimethyl-8-ribityllumazine synthase~TIGRFAM: 6%2C7-dimethyl-8-ribityllumazine synthase gene gene1831 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1801 Sgly_1802 Sgly_1802 Sgly_1802 1828920 1829657 + alpha/beta hydrolase fold protein COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily)~InterPro IPR000073~KEGG: lcb:LCABL_03550 esterase C~PFAM: Alpha/beta hydrolase fold-1~SPTR: Esterase C%3B~PFAM: alpha/beta hydrolase fold gene gene1832 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1802 Sgly_1803 Sgly_1803 Sgly_1803 1829761 1829955 - hypothetical protein KEGG: tjr:TherJR_2679 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1833 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1803 Sgly_1804 Sgly_1804 Sgly_1804 1829974 1830183 - hypothetical protein KEGG: tjr:TherJR_2678 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1834 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1804 Sgly_1805 Sgly_1805 Sgly_1805 1830307 1832094 - 3-octaprenyl-4hydroxybenzoate decarboxylase COGs: COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylase~InterPro IPR002830~KEGG: tjr:TherJR_2498 UbiD family decarboxylase~PFAM: Carboxylyase-related~SPTR: UbiD family decarboxylase%3B~TIGRFAM: Carboxylyase-related~PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase~TIGRFAM: UbiD family decarboxylases gene gene1835 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1805 Sgly_1806 Sgly_1806 Sgly_1806 1832225 1832773 - nitroreductase COGs: COG0778 Nitroreductase~InterPro IPR000415~KEGG: cbe:Cbei_3083 nitroreductase~PFAM: Nitroreductase-like~SPTR: Nitroreductase%3B~PFAM: Nitroreductase family gene gene1836 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1806 Sgly_1807 Sgly_1807 Sgly_1807 1832880 1833665 - hypothetical protein KEGG: ttm:Tthe_0096 putative ABC transporter%2C permease protein~SPTR: Putative ABC transporter%2C permease protein gene gene1837 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1807 Sgly_1808 Sgly_1808 Sgly_1808 1833659 1834354 - ABC transporter related protein COGs: COG1131 ABC-type multidrug transport system ATPase component~InterPro IPR003439: IPR003593~KEGG: cbf:CLI_0638 ABC transporter%2C ATP-binding protein~PFAM: ABC transporter-like~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related%3B~PFAM: ABC transporter gene gene1838 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1808 Sgly_1809 Sgly_1809 Sgly_1809 1834357 1834716 - transcriptional regulator%2C GntR family COGs: COG1725 transcriptional regulator protein~InterPro IPR000524~KEGG: cno:NT01CX_0788 GntR family transcriptional regulator~PFAM: HTH transcriptional regulator%2C GntR~SMART: HTH transcriptional regulator%2C GntR~SPTR: Transcriptional regulator%2C GntR family%3B~PFAM: Bacterial regulatory proteins%2C gntR family gene gene1839 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1809 Sgly_1810 Sgly_1810 Sgly_1810 1834897 1835316 + hypothetical protein KEGG: tva:TVAG_216830 hypothetical protein~SPTR: Sucrose transporter-like protein%2C putative gene gene1840 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1810 Sgly_1811 Sgly_1811 Sgly_1811 1835457 1836716 + protein-export membrane protein SecD COGs: COG0342 Preprotein translocase subunit SecD~InterPro IPR005791: IPR003335~KEGG: clo:HMPREF0868_0967 protein-export membrane protein SecD~PFAM: SecD/SecF/SecDF export membrane protein~SPTR: Protein-export membrane protein SecD%3B~TIGRFAM: SecD export membrane protein%3B SecD/SecF/SecDF export membrane protein~PFAM: Protein export membrane protein~TIGRFAM: protein-export membrane protein SecD%3B protein-export membrane protein%2C SecD/SecF family gene gene1841 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1811 Sgly_1812 Sgly_1812 Sgly_1812 1836713 1837639 + protein-export membrane protein SecF COGs: COG0341 Preprotein translocase subunit SecF~InterPro IPR005665: IPR003335~KEGG: cce:Ccel_0537 protein-export membrane protein SecF~PFAM: SecD/SecF/SecDF export membrane protein~SPTR: Protein-export membrane protein SecD%3B~TIGRFAM: SecF protein~PFAM: Protein export membrane protein~TIGRFAM: protein-export membrane protein%2C SecD/SecF family%3B protein-export membrane protein SecF gene gene1842 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1812 Sgly_1813 Sgly_1813 Sgly_1813 1837828 1839564 - Xenobiotic-transporting ATPase COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterPro IPR001140: IPR003439: IPR003593~KEGG: cbe:Cbei_3093 ABC transporter related~PFAM: ABC transporter-like%3B ABC transporter%2C transmembrane domain~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter%2C permease/ATP-binding protein%3B~PFAM: ABC transporter transmembrane region%3B ABC transporter gene gene1843 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1813 Sgly_1814 Sgly_1814 Sgly_1814 1839558 1841312 - Xenobiotic-transporting ATPase COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterPro IPR001140: IPR003439: IPR003593~KEGG: cbe:Cbei_3094 ABC transporter related~PFAM: ABC transporter-like%3B ABC transporter%2C transmembrane domain~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Probable ABC transporter%2C ATP-binding/permease protein%3B~PFAM: ABC transporter transmembrane region%3B ABC transporter gene gene1844 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1814 Sgly_1815 Sgly_1815 Sgly_1815 1841297 1842913 - extracellular solute-binding protein family 5 COGs: COG0747 ABC-type dipeptide transport system periplasmic component~InterPro IPR000914~KEGG: dae:Dtox_0351 nickel ABC transporter%2C periplasmic nickel-binding protein~PFAM: Bacterial extracellular solute-binding protein%2C family 5~SPTR: Putative uncharacterized protein%3B~PFAM: Bacterial extracellular solute-binding proteins%2C family 5 Middle~TIGRFAM: nickel ABC transporter%2C periplasmic nickel-binding protein gene gene1845 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1815 Sgly_1816 Sgly_1816 Sgly_1816 1842915 1843679 - Nickel-transporting ATPase COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase~InterPro IPR003439: IPR003593~KEGG: wsu:WS0988 oligopeptide ABC transporter ATP-binding protein~PFAM: ABC transporter-like~PRIAM: Nickel-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: OLIGOPEPTIDE ABC TRANSPORTER ATP-BINDING PROTEIN%3B~PFAM: ABC transporter gene gene1846 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1816 Sgly_1817 Sgly_1817 Sgly_1817 1843673 1844473 - Nickel-transporting ATPase COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component~InterPro IPR003439: IPR013563: IPR003593~KEGG: bld:BLi02814 hypothetical protein~PFAM: ABC transporter-like%3B Oligopeptide/dipeptide ABC transporter%2C C-terminal~PRIAM: Nickel-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Dipeptide ABC transporter (ATP-binding protein)%3B~manually curated~PFAM: ABC transporter gene gene1847 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1817 Sgly_1818 Sgly_1818 Sgly_1818 1844466 1845296 - binding-protein-dependent transport systems inner membrane component COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: dau:Daud_0387 binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: ABC transporter%2C permease protein%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1848 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1818 Sgly_1819 Sgly_1819 Sgly_1819 1845293 1846231 - binding-protein-dependent transport systems inner membrane component COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: amt:Amet_4721 binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Binding-protein-dependent transport systems inner membrane component%3B~manually curated~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1849 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1819 Sgly_1820 Sgly_1820 Sgly_1820 1846350 1847330 - transcriptional regulator%2C AraC family COGs: COG2207 AraC-type DNA-binding domain-containing protein~InterPro IPR000005: IPR018060~KEGG: fjo:Fjoh_4270 helix-turn-helix domain-containing protein~PFAM: Helix-turn-helix%2C AraC type~SMART: Helix-turn-helix%2C AraC domain~SPTR: Transcriptional regulator%2C AraC family%3B~PFAM: Bacterial regulatory helix-turn-helix proteins%2C AraC family gene gene1850 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1820 Sgly_1821 Sgly_1821 Sgly_1821 1847460 1848689 - hypothetical protein COGs: COG0226 ABC-type phosphate transport system periplasmic component~KEGG: bbe:BBR47_14690 hypothetical membrane protein~SPTR: ABC transporter extracellular solute-binding protein gene gene1851 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1821 Sgly_1822 Sgly_1822 Sgly_1822 1848869 1851460 - ATP-dependent chaperone ClpB COGs: COG0542 ATPase with chaperone activity ATP-binding subunit~InterPro IPR017730: IPR004176: IPR003959: IPR013093: IPR 019489: IPR003593~KEGG: dsy:DSY1668 hypothetical protein~PFAM: ATPase%2C AAA-2%3B ATPase%2C AAA-type%2C core%3B Clp%2C N-terminal%3B Clp ATPase%2C C-terminal~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Chaperonin ClpB~PFAM: AAA domain (Cdc48 subfamily)%3B C-terminal%2C D2-small domain%2C of ClpB protein%3B Clp amino terminal domain%3B ATPase family associated with various cellular activities (AAA)~TIGRFAM: ATP-dependent chaperone ClpB gene gene1852 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1822 Sgly_1823 Sgly_1823 Sgly_1823 1851500 1852453 - chaperone DnaJ domain protein COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain~InterPro IPR001623: IPR002939~KEGG: rrs:RoseRS_3094 chaperone DnaJ domain-containing protein~PFAM: Chaperone DnaJ%2C C-terminal%3B Heat shock protein DnaJ%2C N-terminal~SMART: Heat shock protein DnaJ%2C N-terminal~SPTR: Chaperone DnaJ domain protein%3B~PFAM: DnaJ domain%3B DnaJ C terminal region gene gene1853 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1823 Sgly_1824 Sgly_1824 Sgly_1824 1852833 1854728 + peptidoglycan-N-acetylmuramate O-acetyltransferase COGs: COG1835 acyltransferase~InterPro IPR002656~KEGG: dhd:Dhaf_2192 acyltransferase 3~PFAM: Acyltransferase 3~SPTR: Putative uncharacterized protein%3B~PFAM: Acyltransferase family gene gene1854 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1824 Sgly_1825 Sgly_1825 Sgly_1825 1854824 1855522 + two component transcriptional regulator%2C winged helix family COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR001789: IPR001867~KEGG: dhd:Dhaf_2193 two component transcriptional regulator%2C winged helix family~PFAM: Signal transduction response regulator%2C receiver domain%3B Signal transduction response regulator%2C C-terminal~SMART: Signal transduction response regulator%2C receiver domain~SPTR: Putative uncharacterized protein%3B~PFAM: Response regulator receiver domain%3B Transcriptional regulatory protein%2C C terminal gene gene1855 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1825 Sgly_1826 Sgly_1826 Sgly_1826 1855523 1856917 + integral membrane sensor signal transduction histidine kinase COGs: COG0642 Signal transduction histidine kinase~InterPro IPR003660: IPR003661: IPR003594~KEGG: dhd:Dhaf_2194 histidine kinase~PFAM: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain%3B HAMP linker domain~SMART: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain%3B HAMP linker domain~SPTR: Putative uncharacterized protein%3B~PFAM: HAMP domain%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain gene gene1856 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1826 Sgly_1827 Sgly_1827 Sgly_1827 1856910 1858334 + hypothetical protein KEGG: dhd:Dhaf_2195 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1857 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1827 Sgly_1828 Sgly_1828 Sgly_1828 1858362 1860368 - small GTP-binding protein COGs: COG0480 Translation elongation factors (GTPase)~InterPro IPR005225: IPR000795: IPR004161: IPR005517: IPR 000640~KEGG: cno:NT01CX_0282 translation elongation factor G~PFAM: Protein synthesis factor%2C GTP-binding%3B Translation elongation factor EFTu/EF1A%2C domain 2%3B Translation elongation factor EFG/EF2%2C domain IV%3B Translation elongation factor EFG/EF2%2C C-terminal~SPTR: Translation elongation factor G%3B~TIGRFAM: Small GTP-binding protein~PFAM: Elongation factor Tu domain 2%3B Elongation factor G C-terminus%3B Elongation factor Tu GTP binding domain%3B Elongation factor G%2C domain IV~TIGRFAM: translation elongation factor EF-G%3B small GTP-binding protein domain gene gene1858 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1828 Sgly_1829 Sgly_1829 Sgly_1829 1860365 1860949 - Abortive infection protein InterPro IPR003675~KEGG: bha:BH1608 hypothetical protein~PFAM: Abortive infection protein~SPTR: BH1608 protein%3B~PFAM: CAAX amino terminal protease family gene gene1859 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1829 Sgly_1830 Sgly_1830 Sgly_1830 1861131 1861469 + nitrogen regulatory protein P-II COGs: COG0347 Nitrogen regulatory protein PII~InterPro IPR002187~KEGG: tjr:TherJR_0703 nitrogen regulatory protein P-II~PFAM: Nitrogen regulatory protein PII~SPTR: Nitrogen regulatory protein P-II%3B~PFAM: Nitrogen regulatory protein P-II gene gene1860 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1830 Sgly_1831 Sgly_1831 Sgly_1831 1861466 1862410 - MscS Mechanosensitive ion channel COGs: COG0668 Small-conductance mechanosensitive channel~InterPro IPR006685~KEGG: pth:PTH_0619 small-conductance mechanosensitive channel~PFAM: Mechanosensitive ion channel MscS~SPTR: Small-conductance mechanosensitive channel%3B~PFAM: Mechanosensitive ion channel gene gene1861 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1831 Sgly_1832 Sgly_1832 Sgly_1832 1862633 1862833 + small acid-soluble spore protein alpha/beta type InterPro IPR001448~KEGG: dhd:Dhaf_3256 small acid-soluble spore protein alpha/beta type~PFAM: Small acid-soluble spore protein%2C alpha/beta-type~SPTR: Putative uncharacterized protein%3B~PFAM: Small%2C acid-soluble spore proteins%2C alpha/beta type gene gene1862 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1832 Sgly_1833 Sgly_1833 Sgly_1833 1862897 1863493 - metal dependent phosphohydrolase COGs: COG1896 hydrolase of HD superfamily~KEGG: ttm:Tthe_2227 metal dependent phosphohydrolase~SPTR: Metal dependent phosphohydrolase gene gene1863 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1833 Sgly_1834 Sgly_1834 Sgly_1834 1863500 1864393 - RarD protein%2C DMT superfamily transporter COGs: COG2962 permease~InterPro IPR004626: IPR000620~KEGG: bcy:Bcer98_2234 transporter DMT superfamily protein~PFAM: Protein of unknown function DUF6%2C transmembrane~SPTR: RarD protein%2C DMT superfamily transporter%3B~TIGRFAM: RarD protein~PFAM: EamA-like transporter family~TIGRFAM: rarD protein gene gene1864 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1834 Sgly_1835 Sgly_1835 Sgly_1835 1864405 1866114 - glutaminyl-tRNA synthetase COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase~HAMAP: Glutaminyl-tRNA synthetase~InterPro IPR004514: IPR020058: IPR020059~KEGG: slp:Slip_2326 glutaminyl-tRNA synthetase~PFAM: Glutamyl/glutaminyl-tRNA synthetase%2C class Ic%2C catalytic domain%3B Glutamyl/glutaminyl-tRNA synthetase%2C class Ic%2C anti-codon binding domain~PRIAM: Glutamine--tRNA ligase~SPTR: Glutaminyl-tRNA synthetase%3B~TIGRFAM: Glutaminyl-tRNA synthetase%2C class Ic~PFAM: tRNA synthetases class I (E and Q)%2C catalytic domain%3B tRNA synthetases class I (E and Q)%2C anti-codon binding domain~TIGRFAM: glutaminyl-tRNA synthetase gene gene1865 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1835 Sgly_1836 Sgly_1836 Sgly_1836 1866301 1867062 - binding-protein-dependent transport systems inner membrane component COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component~InterPro IPR000515~KEGG: tjr:TherJR_1002 binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Binding-protein-dependent transport systems inner membrane component%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1866 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1836 Sgly_1837 Sgly_1837 Sgly_1837 1867059 1867814 - Taurine-transporting ATPase COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component~InterPro IPR003439: IPR003593~KEGG: tjr:TherJR_1003 ABC transporter related protein~PFAM: ABC transporter-like~PRIAM: Taurine-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related protein%3B~PFAM: ABC transporter gene gene1867 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1837 Sgly_1838 Sgly_1838 Sgly_1838 1867840 1868793 - NLPA lipoprotein COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components~InterPro IPR004872: IPR001638~KEGG: tjr:TherJR_1004 NlpA lipoprotein~PFAM: NLPA lipoprotein~SMART: Extracellular solute-binding protein%2C family 3~SPTR: NLPA lipoprotein%3B~PFAM: NMT1/THI5 like gene gene1868 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1838 Sgly_1839 Sgly_1839 Sgly_1839 1868856 1869446 - hypothetical protein KEGG: dhd:Dhaf_3262 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1869 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1839 Sgly_1840 Sgly_1840 Sgly_1840 1869557 1871158 + gamma-glutamyltransferase 2 COGs: COG0405 Gamma-glutamyltransferase~InterPro IPR000101~KEGG: gct:GC56T3_3325 gamma-glutamyltransferase~PFAM: Gamma-glutamyltranspeptidase~PRIAM: Gamma-glutamyltransferase~SPTR: Gamma-glutamyltransferase%3B~PFAM: Gamma-glutamyltranspeptidase~TIGRFAM: gamma-glutamyltranspeptidase gene gene1870 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1840 Sgly_1841 Sgly_1841 Sgly_1841 1871242 1872411 + Monogalactosyldiacylglycerol synthase COGs: COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase~InterPro IPR009695~KEGG: bmd:BMD_5013 monogalactosyldiacylglycerol (MGDG) synthase~PFAM: Monogalactosyldiacylglycerol synthase~SPTR: Monogalactosyldiacylglycerol (MGDG) synthase%3B~PFAM: Glycosyl transferases group 1%3B Monogalactosyldiacylglycerol (MGDG) synthase gene gene1871 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1841 Sgly_1842 Sgly_1842 Sgly_1842 1872404 1873645 + polysaccharide deacetylase COGs: COG0726 xylanase/chitin deacetylase~InterPro IPR002509~KEGG: drm:Dred_0643 polysaccharide deacetylase~PFAM: Polysaccharide deacetylase~SPTR: Polysaccharide deacetylase%3B~PFAM: Polysaccharide deacetylase gene gene1872 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1842 Sgly_1843 Sgly_1843 Sgly_1843 1873724 1874905 + tryptophan synthase%2C beta chain COGs: COG0133 Tryptophan synthase beta chain~HAMAP: Tryptophan synthase beta chain~InterPro IPR006654: IPR001926~KEGG: drm:Dred_1361 tryptophan synthase subunit beta~PFAM: Pyridoxal phosphate-dependent enzyme%2C beta subunit~PRIAM: Tryptophan synthase~SPTR: Tryptophan synthase%2C beta chain%3B~TIGRFAM: Tryptophan synthase%2C beta chain~PFAM: Pyridoxal-phosphate dependent enzyme~TIGRFAM: tryptophan synthase%2C beta subunit gene gene1873 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1843 Sgly_1844 Sgly_1844 Sgly_1844 1875606 1875896 + SAF domain protein InterPro IPR013974~KEGG: dhd:Dhaf_3274 SAF domain protein~PFAM: SAF domain~SPTR: SAF domain protein%3B~PFAM: SAF domain gene gene1874 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1844 Sgly_1845 Sgly_1845 Sgly_1845 1875914 1877074 + Altronate dehydratase COGs: COG2721 Altronate dehydratase~InterPro IPR007392~KEGG: dhd:Dhaf_3275 altronate dehydratase~PFAM: D-galactarate dehydratase/Altronate hydrolase%2C C-terminal~PRIAM: Altronate dehydratase~SPTR: Putative uncharacterized protein%3B~PFAM: D-galactarate dehydratase / Altronate hydrolase%2C C terminus gene gene1875 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1845 Sgly_1846 Sgly_1846 Sgly_1846 1877355 1879205 + asparagine synthase (glutamine-hydrolyzing) COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing)~InterPro IPR006426: IPR000583: IPR001962~KEGG: dae:Dtox_1034 asparagine synthase (glutamine-hydrolyzing)~PFAM: Asparagine synthase%3B Glutamine amidotransferase%2C class-II~PRIAM: Asparagine synthase (glutamine-hydrolyzing)~SPTR: Asparagine synthase (Glutamine-hydrolyzing)%3B~TIGRFAM: Asparagine synthase%2C glutamine-hydrolyzing~PFAM: Asparagine synthase~TIGRFAM: asparagine synthase (glutamine-hydrolyzing) gene gene1876 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1846 Sgly_1847 Sgly_1847 Sgly_1847 1879273 1879812 - hypothetical protein KEGG: ngr:NAEGRDRAFT_38914 mitochondrial citrate synthetase~SPTR: Putative uncharacterized protein gene gene1877 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1847 Sgly_1848 Sgly_1848 Sgly_1848 1879815 1880921 - plasmid segregation actin-type ATPase ParM KEGG: dhd:Dhaf_3280 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1878 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1848 Sgly_1849 Sgly_1849 Sgly_1849 1881156 1881833 + protein of unknown function DUF421 COGs: COG2323 membrane protein~InterPro IPR007353~KEGG: tjr:TherJR_0421 protein of unknown function DUF421~PFAM: Protein of unknown function DUF421~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF421) gene gene1879 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1849 Sgly_1850 Sgly_1850 Sgly_1850 1881848 1882228 + hypothetical protein KEGG: tjr:TherJR_0420 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1880 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1850 Sgly_1851 Sgly_1851 Sgly_1851 1882318 1883187 + ribonuclease BN COGs: COG1295 membrane protein~InterPro IPR017039: IPR004664~KEGG: pjd:Pjdr2_5284 ribonuclease BN~PFAM: Ribonuclease BN-related~SPTR: Ribonuclease BN%3B~TIGRFAM: Ribonuclease BN~manually curated~PFAM: Ribonuclease BN-like family~TIGRFAM: YihY family protein (not ribonuclease BN) gene gene1881 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1851 Sgly_1852 Sgly_1852 Sgly_1852 1883184 1884437 - diaminopimelate decarboxylase COGs: COG0019 Diaminopimelate decarboxylase~InterPro IPR000183~KEGG: dhd:Dhaf_4876 diaminopimelate decarboxylase~PFAM: Orn/DAP/Arg decarboxylase 2~PRIAM: Diaminopimelate decarboxylase~SPTR: Diaminopimelate decarboxylase%3B~PFAM: Pyridoxal-dependent decarboxylase%2C C-terminal sheet domain%3B Pyridoxal-dependent decarboxylase%2C pyridoxal binding domain~TIGRFAM: diaminopimelate decarboxylase gene gene1882 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1852 Sgly_1853 Sgly_1853 Sgly_1853 1884737 1885300 - condensin subunit ScpB COGs: COG1386 transcriptional regulator protein containing the HTH domain~HAMAP: Segregation and condensation protein B~InterPro IPR005234~KEGG: dsy:DSY2287 hypothetical protein~PFAM: Chromosome segregation/condensation protein ScpB%2C prokaryote~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Chromosome segregation/condensation protein ScpB%2C prokaryote~PFAM: Putative transcriptional regulators (Ypuh-like)~TIGRFAM: segregation and condensation protein B gene gene1883 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1853 Sgly_1854 Sgly_1854 Sgly_1854 1885300 1886073 - condensin subunit ScpA COGs: COG1354 conserved hypothetical protein~InterPro IPR003768~KEGG: dhd:Dhaf_3425 chromosome segregation and condensation protein ScpA~PFAM: Prokaryotic chromosome segregation/condensation protein ScpA~SPTR: Segregation and condensation protein A%3B~PFAM: ScpA/B protein gene gene1884 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1854 Sgly_1855 Sgly_1855 Sgly_1855 1886075 1887043 - tryptophanyl-tRNA synthetase COGs: COG0180 Tryptophanyl-tRNA synthetase~InterPro IPR002306: IPR002305~KEGG: dhd:Dhaf_3426 tryptophanyl-tRNA synthetase~PFAM: Aminoacyl-tRNA synthetase%2C class Ib~PRIAM: Tryptophan--tRNA ligase~SPTR: Tryptophanyl-tRNA synthetase%3B~TIGRFAM: Tryptophanyl-tRNA synthetase%2C class Ib~PFAM: tRNA synthetases class I (W and Y)~TIGRFAM: tryptophanyl-tRNA synthetase gene gene1885 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1855 Sgly_1856 Sgly_1856 Sgly_1856 1887043 1889607 - CBS domain containing protein COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase~InterPro IPR001667: IPR003156: IPR000644: IPR002646~KEGG: dhd:Dhaf_3428 polynucleotide adenylyltransferase region~PFAM: Cystathionine beta-synthase%2C core%3B Phosphoesterase%2C RecJ-like%3B Phosphoesterase%2C DHHA1%3B Poly A polymerase%2C head domain~SMART: Cystathionine beta-synthase%2C core~SPTR: Polynucleotide adenylyltransferase region%3B~PFAM: DHH family%3B CBS domain%3B Poly A polymerase head domain gene gene1886 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1856 Sgly_1857 Sgly_1857 Sgly_1857 1889661 1890005 - hypothetical protein KEGG: dhd:Dhaf_3429 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1887 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1857 Sgly_1858 Sgly_1858 Sgly_1858 1890087 1890404 + hypothetical protein KEGG: tps:THAPSDRAFT_21280 hypothetical protein~SPTR: Putative RNA binding protein with KH domain(S) family member (65.6 kD) (ISS) gene gene1888 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1858 Sgly_1859 Sgly_1859 Sgly_1859 1890417 1891916 - GerA spore germination protein InterPro IPR004995~KEGG: dhd:Dhaf_3436 GerA spore germination protein~PFAM: Bacillus/Clostridium GerA spore germination protein~SPTR: Putative uncharacterized protein%3B~PFAM: Bacillus/Clostridium GerA spore germination protein gene gene1889 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1859 Sgly_1860 Sgly_1860 Sgly_1860 1891913 1892275 - stage V sporulation protein AE InterPro IPR014204: IPR005562~KEGG: dhd:Dhaf_3437 stage V sporulation protein AE~PFAM: SpoVA~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Sporulation stage V%2C protein AE~PFAM: SpoVA protein~TIGRFAM: stage V sporulation protein AE gene gene1890 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1860 Sgly_1861 Sgly_1861 Sgly_1861 1892289 1893296 - stage V sporulation protein AD InterPro IPR010894~KEGG: dhd:Dhaf_3438 stage V sporulation protein AD~PFAM: Stage V sporulation AD~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Stage V sporulation AD~PFAM: Stage V sporulation protein AD (SpoVAD)~TIGRFAM: stage V sporulation protein AD gene gene1891 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1861 Sgly_1862 Sgly_1862 Sgly_1862 1893318 1893785 - stage V sporulation protein AC InterPro IPR014203: IPR005562~KEGG: dhd:Dhaf_3439 stage V sporulation protein AC~PFAM: SpoVA~SPTR: Stage V sporulation protein AC%3B~TIGRFAM: Sporulation stage V%2C protein AC~PFAM: SpoVA protein~TIGRFAM: stage V sporulation protein AC gene gene1892 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1862 Sgly_1863 Sgly_1863 Sgly_1863 1894024 1894338 + anti-sigma-factor antagonist COGs: COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)~InterPro IPR003658: IPR002645~KEGG: dhd:Dhaf_3440 anti-sigma-factor antagonist~PFAM: Sulphate transporter/antisigma-factor antagonist STAS~SPTR: Anti-sigma factor antagonist%3B~TIGRFAM: Anti-sigma factor antagonist~PFAM: STAS domain~TIGRFAM: anti-anti-sigma factor%3B anti-sigma F factor antagonist gene gene1893 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1863 Sgly_1864 Sgly_1864 Sgly_1864 1894360 1894794 + anti-sigma regulatory factor%2C serine/threonine protein kinase COGs: COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase)~InterPro IPR010194: IPR003594~KEGG: dhd:Dhaf_3441 anti-sigma F factor~PFAM: ATPase-like%2C ATP-binding domain~SMART: ATPase-like%2C ATP-binding domain~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Anti-sigma F factor~PFAM: Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase~TIGRFAM: anti-sigma F factor gene gene1894 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1864 Sgly_1865 Sgly_1865 Sgly_1865 1894808 1895581 + RNA polymerase%2C sigma subunit%2C RpoX/SigF COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit~InterPro IPR014236: IPR014322: IPR014284: IPR007627: IPR 007624: IPR007630~KEGG: dhd:Dhaf_3442 RNA polymerase%2C sigma 28 subunit%2C SigF~PFAM: RNA polymerase sigma-70 region 4%3B RNA polymerase sigma-70 region 2%3B RNA polymerase sigma-70 region 3~SPTR: RNA polymerase sigma factor%3B~TIGRFAM: RNA polymerase sigma-F type%3B RNA polymerase sigma-B/F/G type%3B RNA polymerase sigma-70~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 3%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family%3B RNA polymerase sigma-F factor%3B RNA polymerase sigma-70 factor%2C sigma-B/F/G subfamily gene gene1895 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1865 Sgly_1866 Sgly_1866 Sgly_1866 1895613 1896782 - Serine-type D-Ala-D-Ala carboxypeptidase COGs: COG1686 D-alanyl-D-alanine carboxypeptidase~InterPro IPR001967: IPR012907~KEGG: dhd:Dhaf_3443 serine-type D-Ala-D-Ala carboxypeptidase~PFAM: Peptidase S11%2C D-alanyl-D-alanine carboxypeptidase A%3B Peptidase S11%2C D-Ala-D-Ala carboxypeptidase A%2C C-terminal~PRIAM: Serine-type D-Ala-D-Ala carboxypeptidase~SPTR: Putative uncharacterized protein%3B~PFAM: D-alanyl-D-alanine carboxypeptidase%3B Penicillin-binding protein 5%2C C-terminal domain gene gene1896 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1866 Sgly_1867 Sgly_1867 Sgly_1867 1896864 1897343 - CoA-binding protein-like protein COGs: COG1832 CoA-binding protein~KEGG: dhd:Dhaf_3444 CoA-binding protein-like protein~SPTR: CoA-binding protein-like protein gene gene1897 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1867 Sgly_1868 Sgly_1868 Sgly_1868 1897540 1898841 - thymidine phosphorylase COGs: COG0213 Thymidine phosphorylase~InterPro IPR018090: IPR017459: IPR000312: IPR013102~KEGG: afl:Aflv_1000 pyrimidine-nucleoside phosphorylase~PFAM: Glycosyl transferase%2C family 3%3B Glycosyl transferase%2C family 3%2C N-terminal%3B Pyrimidine nucleoside phosphorylase%2C C-terminal~PRIAM: Pyrimidine-nucleoside phosphorylase~SPTR: Pyrimidine-nucleoside phosphorylase%3B~TIGRFAM: Pyrimidine-nucleoside phosphorylase%2C bacterial/eukaryotic~PFAM: Glycosyl transferase family%2C a/b domain%3B Pyrimidine nucleoside phosphorylase C-terminal domain%3B Glycosyl transferase family%2C helical bundle domain~TIGRFAM: pyrimidine-nucleoside phosphorylase gene gene1898 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1868 Sgly_1869 Sgly_1869 Sgly_1869 1898909 1899748 - purine nucleoside phosphorylase I%2C inosine and guanosine-specific COGs: COG0005 Purine nucleoside phosphorylase~InterPro IPR011268: IPR011270: IPR000845~KEGG: dsy:DSY2310 hypothetical protein~PFAM: Nucleoside phosphorylase~PRIAM: Purine-nucleoside phosphorylase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Purine nucleoside phosphorylase I%2C inosine/guanosine-specific%3B Inosine guanosine/xanthosine phosphorylase~PFAM: Phosphorylase superfamily~TIGRFAM: purine nucleoside phosphorylase I%2C inosine and guanosine-specific%3B inosine guanosine and xanthosine phosphorylase family gene gene1899 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1869 Sgly_1870 Sgly_1870 Sgly_1870 1899750 1900937 - Phosphopentomutase COGs: COG1015 Phosphopentomutase~HAMAP: Phosphopentomutase~InterPro IPR010045: IPR006124~KEGG: dhd:Dhaf_3449 phosphopentomutase~PFAM: Metalloenzyme~PRIAM: Phosphopentomutase~SPTR: Phosphopentomutase%3B~TIGRFAM: Phosphopentomutase~PFAM: Metalloenzyme superfamily~TIGRFAM: phosphopentomutase gene gene1900 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1870 Sgly_1871 Sgly_1871 Sgly_1871 1900927 1901874 - tyrosine recombinase XerD subunit COGs: COG4974 Site-specific recombinase XerD~HAMAP: Tyrosine recombinase xerC~InterPro IPR011932: IPR004107: IPR002104~KEGG: dhd:Dhaf_3450 tyrosine recombinase XerD~PFAM: Integrase%2C catalytic core%2C phage%3B Integrase%2C N-terminal SAM-like%2C phage~SPTR: Tyrosine recombinase XerD%3B~TIGRFAM: Tyrosine recombinase XerD~PFAM: Phage integrase%2C N-terminal SAM-like domain%3B Phage integrase family~TIGRFAM: tyrosine recombinase XerD gene gene1901 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1871 Sgly_1872 Sgly_1872 Sgly_1872 1901994 1902593 - stage II sporulation protein M InterPro IPR014196: IPR002798~KEGG: dhd:Dhaf_3462 stage II sporulation protein M~PFAM: Protein of unknown function DUF95%2C transmembrane~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Sporulation stage II%2C protein M~PFAM: Integral membrane protein DUF95~TIGRFAM: stage II sporulation protein M gene gene1902 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1872 Sgly_1873 Sgly_1873 Sgly_1873 1902660 1903223 - NUDIX hydrolase InterPro IPR000086~KEGG: dhd:Dhaf_3464 NUDIX hydrolase~PFAM: NUDIX hydrolase domain~SPTR: Putative uncharacterized protein%3B~PFAM: NUDIX domain gene gene1903 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1873 Sgly_1874 Sgly_1874 Sgly_1874 1903484 1904296 - response regulator receiver protein COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain~InterPro IPR012052: IPR001789: IPR014879~KEGG: dhd:Dhaf_3481 sporulation transcriptional activator Spo0A~PFAM: Sporulation initiation factor Spo0A%2C C-terminal%3B Signal transduction response regulator%2C receiver domain~SMART: Signal transduction response regulator%2C receiver domain~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Sporulation stage 0%2C transcription factor Spo0A~PFAM: Sporulation initiation factor Spo0A C terminal%3B Response regulator receiver domain~TIGRFAM: sporulation transcription factor Spo0A gene gene1904 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1874 Sgly_1875 Sgly_1875 Sgly_1875 1904512 1905753 - SpoIVB peptidase InterPro IPR014219: IPR008763: IPR001478~KEGG: dhd:Dhaf_3482 stage IV sporulation protein B~PFAM: Peptidase S55%2C SpoIVB~PRIAM: SpoIVB peptidase~SMART: PDZ/DHR/GLGF~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Peptidase S55%2C sporulation stage IV%2C protein B~PFAM: SpoIVB peptidase S55~TIGRFAM: stage IV sporulation protein B gene gene1905 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1875 Sgly_1876 Sgly_1876 Sgly_1876 1905981 1906673 + hypothetical protein KEGG: sli:Slin_3605 putative lipoprotein~SPTR: Putative lipoprotein gene gene1906 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1876 Sgly_1877 Sgly_1877 Sgly_1877 1906685 1907032 - hypothetical protein KEGG: cpr:CPR_0955 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: EamA-like transporter family gene gene1907 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1877 Sgly_1878 Sgly_1878 Sgly_1878 1907036 1908328 - dolichyl-phosphate-mannose-protein mannosyltransferase family protein KEGG: cpr:CPR_0954 dolichyl-phosphate-mannose-protein mannosyltransferase family protein~SPTR: Glycosyl transferase gene gene1908 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1878 Sgly_1879 Sgly_1879 Sgly_1879 1908364 1908732 - hypothetical protein KEGG: cth:Cthe_3098 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterized conserved protein (DUF2304) gene gene1909 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1879 Sgly_1880 Sgly_1880 Sgly_1880 1908737 1909447 - glycosyl transferase family 2 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis~InterPro IPR001173~KEGG: cth:Cthe_3099 glycosyl transferase family protein~PFAM: Glycosyl transferase%2C family 2~SPTR: Glycosyl transferase%2C family 2%3B~PFAM: Glycosyl transferase family 2 gene gene1910 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1880 Sgly_1881 Sgly_1881 Sgly_1881 1909626 1911290 - DNA replication and repair protein RecN COGs: COG0497 ATPase involved in DNA repair~InterPro IPR004604: IPR003395: IPR003593~KEGG: dhd:Dhaf_3483 DNA repair protein RecN~PFAM: RecF/RecN/SMC protein%2C N-terminal~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~TIGRFAM: DNA recombination/repair protein RecN~PFAM: RecF/RecN/SMC N terminal domain~TIGRFAM: DNA repair protein RecN gene gene1911 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1881 Sgly_1882 Sgly_1882 Sgly_1882 1911299 1911751 - transcriptional regulator%2C ArgR family COGs: COG1438 Arginine repressor~HAMAP: Arginine repressor~InterPro IPR001669: IPR020899~KEGG: dhd:Dhaf_3484 arginine repressor%2C ArgR~PFAM: Arginine repressor%2C C-terminal~SPTR: Arginine repressor%3B~TIGRFAM: Arginine repressor~PFAM: Arginine repressor%2C C-terminal domain%3B Arginine repressor%2C DNA binding domain~TIGRFAM: arginine repressor gene gene1912 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1882 Sgly_1883 Sgly_1883 Sgly_1883 1911729 1912331 - rRNA methylase InterPro IPR010719~KEGG: dhd:Dhaf_3485 putative rRNA methylase~PFAM: Putative rRNA methylase~SPTR: Putative uncharacterized protein%3B~manually curated~PFAM: Putative rRNA methylase gene gene1913 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1883 Sgly_1884 Sgly_1884 Sgly_1884 1912324 1913139 - inorganic polyphosphate/ATP-NAD kinase COGs: COG0061 sugar kinase~HAMAP: inorganic polyphosphate/ATP-NAD kinase~InterPro IPR002504~KEGG: dhd:Dhaf_3486 ATP-NAD/AcoX kinase~PFAM: ATP-NAD/AcoX kinase~SPTR: Probable inorganic polyphosphate/ATP-NAD kinase%3B~PFAM: ATP-NAD kinase gene gene1914 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1884 Sgly_1885 Sgly_1885 Sgly_1885 1913146 1913964 - hemolysin A COGs: COG1189 rRNA methylase~InterPro IPR004538: IPR002942: IPR002877~KEGG: dsy:DSY2347 hypothetical protein~PFAM: RNA-binding S4%3B Ribosomal RNA methyltransferase RrmJ/FtsJ~SMART: RNA-binding S4~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Haemolysin A~PFAM: S4 domain%3B FtsJ-like methyltransferase~TIGRFAM: hemolysin TlyA family protein gene gene1915 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1885 Sgly_1886 Sgly_1886 Sgly_1886 1914051 1915949 - 1-deoxy-D-xylulose-5-phosphate synthase COGs: COG1154 Deoxyxylulose-5-phosphate synthase~HAMAP: Deoxyxylulose-5-phosphate synthase~InterPro IPR005477: IPR005475: IPR005476~KEGG: dsy:DSY2348 hypothetical protein~PFAM: Transketolase-like%2C pyrimidine-binding domain%3B Transketolase%2C C-terminal~PRIAM: 1-deoxy-D-xylulose-5-phosphate synthase~SPTR: 1-deoxy-D-xylulose-5-phosphate synthase%3B~TIGRFAM: Deoxyxylulose-5-phosphate synthase~PFAM: Dehydrogenase E1 component%3B Transketolase%2C C-terminal domain%3B Transketolase%2C pyrimidine binding domain~TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase gene gene1916 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1886 Sgly_1887 Sgly_1887 Sgly_1887 1915977 1916438 - acid phosphatase/vanadium-dependent haloperoxidase related protein COGs: COG1963 conserved hypothetical protein~InterPro IPR003832~KEGG: dsy:DSY2350 hypothetical protein~PFAM: Acid phosphatase/vanadium-dependent haloperoxidase related~SPTR: Putative uncharacterized protein%3B~PFAM: Divergent PAP2 family gene gene1917 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1887 Sgly_1888 Sgly_1888 Sgly_1888 1916517 1917386 - farnesyl-diphosphate synthase COGs: COG0142 Geranylgeranyl pyrophosphate synthase~InterPro IPR000092~KEGG: dhd:Dhaf_3491 polyprenyl synthetase~PFAM: Polyprenyl synthetase~SPTR: Polyprenyl synthetase%3B~PFAM: Polyprenyl synthetase gene gene1918 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1888 Sgly_1889 Sgly_1889 Sgly_1889 1917373 1917630 - Exodeoxyribonuclease 7 small subunit HAMAP: Exonuclease VII%2C small subunit~InterPro IPR003761~KEGG: dhd:Dhaf_3492 exodeoxyribonuclease VII%2C small subunit~PFAM: Exonuclease VII%2C small subunit~SPTR: Exodeoxyribonuclease 7 small subunit%3B~TIGRFAM: Exonuclease VII%2C small subunit~PFAM: Exonuclease VII small subunit~TIGRFAM: exodeoxyribonuclease VII%2C small subunit gene gene1919 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1889 Sgly_1890 Sgly_1890 Sgly_1890 1917791 1918996 - Exodeoxyribonuclease VII large subunit COGs: COG1570 Exonuclease VII large subunit~HAMAP: Exonuclease VII%2C large subunit~InterPro IPR003753: IPR004365: IPR020579~KEGG: dhd:Dhaf_3493 exodeoxyribonuclease VII%2C large subunit~PFAM: Exonuclease VII%2C large subunit%2C C-terminal%3B Nucleic acid binding%2C OB-fold%2C tRNA/helicase-type~SPTR: Exodeoxyribonuclease 7 large subunit%3B~TIGRFAM: Exonuclease VII%2C large subunit~PFAM: Exonuclease VII%2C large subunit%3B OB-fold nucleic acid binding domain~TIGRFAM: exodeoxyribonuclease VII%2C large subunit gene gene1920 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1890 Sgly_1891 Sgly_1891 Sgly_1891 1919258 1919887 - Formimidoyltetrahydrofolate cyclodeaminase COGs: COG3404 Methenyl tetrahydrofolate cyclohydrolase~InterPro IPR007044~KEGG: dhd:Dhaf_3495 formiminotransferase-cyclodeaminase~PFAM: Cyclodeaminase/cyclohydrolase~PRIAM: Methenyltetrahydrofolate cyclohydrolase~SPTR: Putative uncharacterized protein%3B~PFAM: Formiminotransferase-cyclodeaminase gene gene1921 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1891 Sgly_1892 Sgly_1892 Sgly_1892 1919884 1920741 - 5%2C10-methylenetetrahydrofolate dehydrogenase (NADP+)%3B methenyltetrahydrofolate cyclohydrolase COGs: COG0190 5 10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase~HAMAP: Tetrahydrofolate dehydrogenase/cyclohydrolase~InterPro IPR000672: IPR020630: IPR020631~KEGG: dhd:Dhaf_3496 methylenetetrahydrofolate dehydrogenase (NADP(+))~PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase%2C NAD(P)-binding domain%3B Tetrahydrofolate dehydrogenase/cyclohydrolase%2C catalytic domain~PRIAM: Methylenetetrahydrofolate dehydrogenase (NADP(+))~SPTR: Methylenetetrahydrofolate dehydrogenase (NADP(+))%3B~PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase%2C NAD(P)-binding domain%3B Tetrahydrofolate dehydrogenase/cyclohydrolase%2C catalytic domain gene gene1922 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1892 Sgly_1893 Sgly_1893 Sgly_1893 1921099 1921533 + pyridoxamine 5'-phosphate oxidase-related FMN-binding protein COGs: COG5015 conserved hypothetical protein~InterPro IPR011576~KEGG: cth:Cthe_2635 pyridoxamine 5'-phosphate oxidase-related%2C FMN-binding~PFAM: Pyridoxamine 5'-phosphate oxidase-like%2C FMN-binding domain~SPTR: Pyridoxamine 5'-phosphate oxidase-related%2C FMN-binding%3B~PFAM: Pyridoxamine 5'-phosphate oxidase gene gene1923 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1893 Sgly_1894 Sgly_1894 Sgly_1894 1921567 1922181 + hypothetical protein KEGG: lsp:Bsph_3221 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1924 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1894 Sgly_1895 Sgly_1895 Sgly_1895 1922207 1922724 - pseudogene gene1925 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1895 Sgly_1896 Sgly_1896 Sgly_1896 1922766 1923611 - oxidoreductase FAD/NAD(P)-binding domain protein COGs: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase~InterPro IPR008333: IPR001433: IPR019480~KEGG: mta:Moth_0816 oxidoreductase FAD/NAD(P)-binding~PFAM: Oxidoreductase FAD/NAD(P)-binding%3B Oxidoreductase%2C FAD-binding domain%3B Dihydroorotate dehydrogenase%2C electron transfer subunit%2C iron-sulphur cluster binding domain~SPTR: Oxidoreductase FAD/NAD(P)-binding%3B~PFAM: Oxidoreductase FAD-binding domain%3B Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B%3B Oxidoreductase NAD-binding domain gene gene1926 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1896 Sgly_1897 Sgly_1897 Sgly_1897 1923612 1924604 - 4fe-4S ferredoxin%2C iron-sulfur binding protein%2C putative KEGG: hmo:HM1_2011 4fe-4S ferredoxin%2C iron-sulfur binding protein%2C putative~SPTR: 4fe-4S ferredoxin%2C iron-sulfur binding protein%2C putative%3B~TIGRFAM: sulfite reductase%2C subunit A gene gene1927 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1897 Sgly_1898 Sgly_1898 Sgly_1898 1924617 1925504 - 4Fe-4S ferredoxin%2C iron-sulfur binding protein KEGG: mta:Moth_0814 4Fe-4S ferredoxin%2C iron-sulfur binding~SPTR: 4Fe-4S ferredoxin%2C iron-sulfur binding gene gene1928 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1898 Sgly_1899 Sgly_1899 Sgly_1899 1925492 1925938 - methyl-viologen-reducing hydrogenase delta subunit COGs: COG1908 Coenzyme F420-reducing hydrogenase delta subunit~InterPro IPR003813~KEGG: hmo:HM1_2009 methyl-viologen-reducing hydrogenase domain protein%2C subunit d%2C putative~PFAM: Methyl-viologen-reducing hydrogenase%2C delta subunit~SPTR: Methyl-viologen-reducing hydrogenase domain protein%2C subunit d%2C putative%3B~PFAM: Methyl-viologen-reducing hydrogenase%2C delta subunit gene gene1929 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1899 Sgly_1900 Sgly_1900 Sgly_1900 1925929 1927911 - fumarate reductase/succinate dehydrogenase flavoprotein domain protein COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins~InterPro IPR003953~KEGG: chy:CHY_0930 heterodisulfide reductase%2C subunit A%2C selenocysteine-containing~PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein%2C N-terminal~SPTR: Heterodisulfide reductase%2C subunit A%2C selenocysteine-containing%3B~PFAM: FAD binding domain gene gene1930 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1900 Sgly_1901 Sgly_1901 Sgly_1901 1927908 1928795 - CoB--CoM heterodisulfide reductase COGs: COG2048 Heterodisulfide reductase subunit B~InterPro IPR004017~KEGG: mta:Moth_0810 hypothetical protein~PFAM: Cysteine-rich domain~PRIAM: CoB--CoM heterodisulfide reductase~SPTR: Putative uncharacterized protein%3B~PFAM: Cysteine-rich domain gene gene1931 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1901 Sgly_1902 Sgly_1902 Sgly_1902 1928792 1929361 - 4Fe-4S ferredoxin%2C iron-sulfur binding protein COGs: COG1150 Heterodisulfide reductase subunit C~KEGG: mta:Moth_0809 4Fe-4S ferredoxin%2C iron-sulfur binding~SPTR: 4Fe-4S ferredoxin%2C iron-sulfur binding gene gene1932 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1902 Sgly_1903 Sgly_1903 Sgly_1903 1929726 1930376 - Redox-sensing transcriptional repressor rex COGs: COG2344 AT-rich DNA-binding protein~HAMAP: Redox-sensing transcriptional repressor rex~InterPro IPR009718: IPR003781~KEGG: cth:Cthe_1798 redox-sensing transcriptional repressor REX~PFAM: CoA-binding%3B Rex DNA-binding%2C C-terminal~SPTR: CoA-binding protein%3B~PFAM: CoA binding domain%3B Putative DNA-binding protein N-terminus gene gene1933 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1903 Sgly_1904 Sgly_1904 Sgly_1904 1930363 1931331 - peptidase M22 glycoprotease COGs: COG0533 Metal-dependent protease with possible chaperone activity~InterPro IPR000905~KEGG: dhd:Dhaf_3503 O-sialoglycoprotein endopeptidase~PFAM: Peptidase M22%2C glycoprotease~SPTR: Putative uncharacterized protein%3B~PFAM: Glycoprotease family~TIGRFAM: metallohydrolase%2C glycoprotease/Kae1 family gene gene1934 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1904 Sgly_1905 Sgly_1905 Sgly_1905 1931342 1931782 - NusB antitermination factor COGs: COG0781 Transcription termination factor~HAMAP: N utilization substance protein B-like protein~InterPro IPR011605: IPR006027~KEGG: dhd:Dhaf_3504 NusB antitermination factor~PFAM: NusB/RsmB/TIM44~SPTR: N utilization substance protein B homolog%3B~TIGRFAM: NusB antitermination factor~PFAM: NusB family~TIGRFAM: transcription antitermination factor NusB gene gene1935 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1905 Sgly_1906 Sgly_1906 Sgly_1906 1931826 1932101 - Protein of unknown function DUF2273 InterPro IPR018730~KEGG: nth:Nther_1703 hypothetical protein~PFAM: Protein of unknown function DUF2273~SPTR: Putative uncharacterized protein%3B~PFAM: Small integral membrane protein (DUF2273) gene gene1936 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1906 Sgly_1907 Sgly_1907 Sgly_1907 1932127 1932447 - hypothetical protein KEGG: dhd:Dhaf_3505 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1937 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1907 Sgly_1908 Sgly_1908 Sgly_1908 1932497 1932889 - protein of unknown function DUF322 COGs: COG1302 conserved hypothetical protein~InterPro IPR005531~KEGG: dhd:Dhaf_3506 protein of unknown function DUF322~PFAM: Protein of unknown function DUF322~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF322) gene gene1938 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1908 Sgly_1909 Sgly_1909 Sgly_1909 1932909 1933001 - hypothetical protein gene gene1939 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1909 Sgly_1910 Sgly_1910 Sgly_1910 1933001 1933525 - hypothetical protein KEGG: dsy:DSY2368 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1940 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1910 Sgly_1911 Sgly_1911 Sgly_1911 1933515 1934087 - stage III sporulation protein AG%2C putative KEGG: dhd:Dhaf_3510 stage III sporulation protein AG%2C putative~SPTR: Stage III sporulation protein AG%2C putative%3B~TIGRFAM: stage III sporulation protein AG gene gene1941 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1911 Sgly_1912 Sgly_1912 Sgly_1912 1934139 1934666 - Sporulation stage III protein AF InterPro IPR014245~KEGG: dhd:Dhaf_3511 hypothetical protein~PFAM: Sporulation stage III%2C protein AF~SPTR: Putative uncharacterized protein%3B~PFAM: Stage III sporulation protein AF (Spore_III_AF)~TIGRFAM: stage III sporulation protein AF gene gene1942 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1912 Sgly_1913 Sgly_1913 Sgly_1913 1934727 1935884 - stage III sporulation protein AE InterPro IPR014194~KEGG: dhd:Dhaf_3512 stage III sporulation protein AE~PFAM: Sporulation stage III%2C protein AE~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Sporulation stage III%2C protein AE~PFAM: Stage III sporulation protein AE (spore_III_AE)~TIGRFAM: stage III sporulation protein AE gene gene1943 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1913 Sgly_1914 Sgly_1914 Sgly_1914 1935896 1936282 - stage III sporulation protein AD InterPro IPR014211~KEGG: dhd:Dhaf_3513 stage III sporulation protein AD~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Sporulation stage III%2C protein AD~PFAM: Stage III sporulation protein AC/AD protein family~TIGRFAM: stage III sporulation protein AD gene gene1944 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1914 Sgly_1915 Sgly_1915 Sgly_1915 1936294 1936491 - stage III sporulation protein AC InterPro IPR009570~KEGG: dhd:Dhaf_3514 stage III sporulation protein AC~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Sporulation stage III%2C protein AC~PFAM: Stage III sporulation protein AC/AD protein family~TIGRFAM: stage III sporulation protein AC gene gene1945 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1915 Sgly_1916 Sgly_1916 Sgly_1916 1936507 1937016 - Sporulation stage III protein AB InterPro IPR014198~KEGG: dhd:Dhaf_3515 stage III sporulation protein SpoAB~PFAM: Sporulation stage III%2C protein AB~SPTR: Putative uncharacterized protein%3B~PFAM: Stage III sporulation protein AB (spore_III_AB)~TIGRFAM: stage III sporulation protein AB gene gene1946 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1916 Sgly_1917 Sgly_1917 Sgly_1917 1937007 1938041 - stage III sporulation protein AA COGs: COG3854 conserved hypothetical protein~InterPro IPR014217~KEGG: dhd:Dhaf_3516 stage III sporulation protein AA~SPTR: Stage III sporulation protein AA%3B~TIGRFAM: Sporulation stage III%2C protein AA~TIGRFAM: stage III sporulation protein AA gene gene1947 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1917 Sgly_1918 Sgly_1918 Sgly_1918 1938222 1938779 - translation elongation factor P (EF-P) COGs: COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)~HAMAP: Translation elongation factor P~InterPro IPR011768: IPR013185: IPR001059: IPR015365~KEGG: dhd:Dhaf_3519 elongation factor P~PFAM: Translation elongation factor%2C KOW-like%3B Translation elongation factor P/YeiP%2C central%3B Elongation factor P%2C C-terminal~SPTR: Elongation factor P%3B~TIGRFAM: Translation elongation factor P~PFAM: Elongation factor P%2C C-terminal%3B Elongation factor P (EF-P) KOW-like domain%3B Elongation factor P (EF-P) OB domain~TIGRFAM: translation elongation factor P gene gene1948 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1918 Sgly_1919 Sgly_1919 Sgly_1919 1938825 1939886 - peptidase M24 COGs: COG0006 Xaa-Pro aminopeptidase~InterPro IPR000587: IPR000994~KEGG: drm:Dred_1051 peptidase M24~PFAM: Peptidase M24%2C structural domain%3B Creatinase~SPTR: Uncharacterized peptidase yqhT%3B~PFAM: Metallopeptidase family M24%3B Creatinase/Prolidase N-terminal domain gene gene1949 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1919 Sgly_1920 Sgly_1920 Sgly_1920 1939870 1940340 - 3-dehydroquinate dehydratase COGs: COG0757 3-dehydroquinate dehydratase II~InterPro IPR001874~KEGG: dhd:Dhaf_3520 3-dehydroquinate dehydratase~PFAM: Dehydroquinase%2C class II~PRIAM: 3-dehydroquinate dehydratase~SPTR: 3-dehydroquinate dehydratase%3B~PFAM: Dehydroquinase class II~TIGRFAM: 3-dehydroquinate dehydratase%2C type II gene gene1950 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1920 Sgly_1921 Sgly_1921 Sgly_1921 1940528 1942246 + L-amino-acid oxidase COGs: COG1231 Monoamine oxidase~InterPro IPR002937~KEGG: cce:Ccel_1778 amine oxidase~PFAM: Amine oxidase~PRIAM: L-amino-acid oxidase~SPTR: Amine oxidase%3B~PFAM: Flavin containing amine oxidoreductase gene gene1951 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1921 Sgly_1922 Sgly_1922 Sgly_1922 1942268 1942669 - Peptidoglycan-binding lysin domain protein InterPro IPR002482: IPR018392~KEGG: dhd:Dhaf_3521 peptidoglycan-binding LysM~PFAM: Peptidoglycan-binding lysin domain~SMART: Peptidoglycan-binding Lysin subgroup~SPTR: Peptidoglycan-binding LysM%3B~PFAM: LysM domain gene gene1952 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1922 Sgly_1923 Sgly_1923 Sgly_1923 1942705 1943214 - hypothetical protein KEGG: rpf:Rpic12D_4517 ATP-dependent metalloprotease FtsH~SPTR: VlsE gene gene1953 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1923 Sgly_1924 Sgly_1924 Sgly_1924 1943192 1944523 - hypothetical protein KEGG: dhd:Dhaf_3523 fimbrial assembly family protein~SPTR: Fimbrial assembly family protein%3B~PFAM: Competence protein A~TIGRFAM: general secretion pathway protein L gene gene1954 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1924 Sgly_1925 Sgly_1925 Sgly_1925 1944613 1945398 - Prepilin peptidase COGs: COG1989 Type II secretory pathway prepilin signal peptidase PulO and related peptidase~InterPro IPR010627: IPR000045~KEGG: tte:TTE1266 signal peptidase%2C cleaves prepilin-like proteins~PFAM: Peptidase A24A%2C N-terminal%3B Peptidase A24A%2C prepilin type IV~PRIAM: Prepilin peptidase~SPTR: Signal peptidase%2C cleaves prepilin-like proteins%3B~PFAM: Bacterial Peptidase A24 N-terminal domain%3B Type IV leader peptidase family gene gene1955 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1925 Sgly_1926 Sgly_1926 Sgly_1926 1945380 1945871 - hypothetical protein InterPro IPR012902~KEGG: dhd:Dhaf_3525 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Prokaryotic N-terminal methylation motif~TIGRFAM: general secretion pathway protein G%3B prepilin-type N-terminal cleavage/methylation domain gene gene1956 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1926 Sgly_1927 Sgly_1927 Sgly_1927 1945896 1947059 - Type II secretion system F domain protein COGs: COG1459 Type II secretory pathway component PulF~InterPro IPR018076~KEGG: dsy:DSY2384 hypothetical protein~PFAM: Type II secretion system F domain~SPTR: Putative uncharacterized protein%3B~PFAM: Bacterial type II secretion system protein F domain gene gene1957 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1927 Sgly_1928 Sgly_1928 Sgly_1928 1947082 1948581 - type II secretion system protein E COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB~InterPro IPR003593: IPR007831: IPR001482~KEGG: dsy:DSY2386 hypothetical protein~PFAM: Type II secretion system protein E%3B General secretory system II%2C protein E%2C N-terminal~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: Type II/IV secretion system protein%3B GSPII_E N-terminal domain gene gene1958 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1928 Sgly_1929 Sgly_1929 Sgly_1929 1948578 1948832 - hypothetical protein KEGG: dhd:Dhaf_3529 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1959 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1929 Sgly_1930 Sgly_1930 Sgly_1930 1948958 1949467 - hypothetical protein InterPro IPR012902~KEGG: dsy:DSY2387 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Prokaryotic N-terminal methylation motif~TIGRFAM: prepilin-type N-terminal cleavage/methylation domain gene gene1960 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1930 Sgly_1931 Sgly_1931 Sgly_1931 1949490 1949891 - hypothetical protein KEGG: erg:ERGA_CDS_02440 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1961 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1931 Sgly_1932 Sgly_1932 Sgly_1932 1950017 1950529 - Shikimate kinase COGs: COG0703 Shikimate kinase~HAMAP: Shikimate kinase~InterPro IPR000623~KEGG: dsy:DSY2391 hypothetical protein~PFAM: Shikimate kinase~PRIAM: Shikimate kinase~SPTR: Shikimate kinase%3B~PFAM: Shikimate kinase gene gene1962 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1932 Sgly_1933 Sgly_1933 Sgly_1933 1950607 1951074 - hypothetical protein InterPro IPR012902~KEGG: dhd:Dhaf_3536 hypothetical protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: prepilin-type N-terminal cleavage/methylation domain gene gene1963 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1933 Sgly_1934 Sgly_1934 Sgly_1934 1951025 1951846 - Shikimate dehydrogenase COGs: COG0169 Shikimate 5-dehydrogenase~HAMAP: Shikimate dehydrogenase~InterPro IPR011342: IPR013708: IPR006151~KEGG: dhd:Dhaf_3537 shikimate 5-dehydrogenase~PFAM: Shikimate dehydrogenase substrate binding%2C N-terminal%3B Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase~SPTR: Shikimate 5-dehydrogenase%3B~TIGRFAM: Quinate/shikimate 5-dehydrogenase~PFAM: Shikimate dehydrogenase substrate binding domain%3B Shikimate / quinate 5-dehydrogenase~TIGRFAM: shikimate 5-dehydrogenase gene gene1964 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1934 Sgly_1935 Sgly_1935 Sgly_1935 1951881 1952405 - HAD superfamily (subfamily IIIA) phosphatase%2C TIGR01668 COGs: COG2179 hydrolase of the HAD superfamily~InterPro IPR010021: IPR006549: IPR005834~KEGG: dhd:Dhaf_3538 HAD superfamily (subfamily IIIA) phosphatase%2C TIGR01668~PFAM: Haloacid dehalogenase-like hydrolase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: HAD-superfamily phosphatase%2C subfamily IIIA%3B HAD-superfamily hydrolase%2C subfamily IIIA~PFAM: Protein of unknown function~TIGRFAM: HAD-superfamily hydrolase%2C subfamily IIIA%3B HAD superfamily (subfamily IIIA) phosphatase%2C TIGR01668 gene gene1965 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1935 Sgly_1936 Sgly_1936 Sgly_1936 1952517 1953263 - RNA polymerase%2C sigma 27/28 subunit%2C RpsK/SigK COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit~InterPro IPR014209: IPR014284: IPR007627: IPR007630~KEGG: dhd:Dhaf_3546 sporulation sigma factor SigK~PFAM: RNA polymerase sigma-70 region 2%3B RNA polymerase sigma-70 region 4~SPTR: RNA polymerase sigma factor%3B~TIGRFAM: RNA polymerase sigma-K type%3B RNA polymerase sigma-70~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family%3B RNA polymerase sigma-K factor gene gene1966 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1936 Sgly_1937 Sgly_1937 Sgly_1937 1953479 1954027 - hypothetical protein KEGG: dhd:Dhaf_3547 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1967 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1937 Sgly_1938 Sgly_1938 Sgly_1938 1954047 1954589 - Fimbrial assembly family protein InterPro IPR007813~KEGG: dsy:DSY2405 hypothetical protein~PFAM: Fimbrial assembly~SPTR: Putative uncharacterized protein gene gene1968 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1938 Sgly_1939 Sgly_1939 Sgly_1939 1954586 1955731 - hypothetical protein COGs: COG4972 Tfp pilus assembly protein ATPase PilM~KEGG: dsy:DSY2406 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Competence protein A~TIGRFAM: type IV pilus assembly protein PilM gene gene1969 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1939 Sgly_1940 Sgly_1940 Sgly_1940 1955776 1956072 - hypothetical protein KEGG: dhd:Dhaf_3557 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1970 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1940 Sgly_1941 Sgly_1941 Sgly_1941 1956076 1957326 - peptidase U32 COGs: COG0826 Collagenase and related protease~InterPro IPR001539~KEGG: dhd:Dhaf_3558 peptidase U32~PFAM: Peptidase U32~SPTR: Peptidase U32%3B~PFAM: Peptidase family U32 gene gene1971 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1941 Sgly_1942 Sgly_1942 Sgly_1942 1957347 1958360 - aminodeoxychorismate lyase COGs: COG1559 periplasmic solute-binding protein~InterPro IPR003770~KEGG: dhd:Dhaf_3559 aminodeoxychorismate lyase~PFAM: Uncharacterised protein family YceG-like~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Uncharacterised protein family YceG-like~PFAM: YceG-like family~TIGRFAM: conserved hypothetical protein%2C YceG family gene gene1972 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1942 Sgly_1943 Sgly_1943 Sgly_1943 1958555 1958866 - UPF0473 protein HAMAP: UPF0473 protein~InterPro IPR009711~KEGG: dhd:Dhaf_3561 protein of unknown function DUF1292~PFAM: Protein of unknown function DUF1292~SPTR: UPF0473 protein DSY2417%3B~PFAM: Protein of unknown function (DUF1292) gene gene1973 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1943 Sgly_1944 Sgly_1944 Sgly_1944 1958947 1959351 - Holliday junction resolvase COGs: COG0816 endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)~HAMAP: Resolvase%2C holliday junction-type%2C YqgF-like~InterPro IPR005227: IPR006641~KEGG: dhd:Dhaf_3562 Holliday junction resolvase-like protein~PFAM: Resolvase%2C holliday junction-type%2C YqgF-like~SMART: Resolvase%2C RNase H-like fold~SPTR: Putative Holliday junction resolvase%3B~TIGRFAM: Resolvase%2C holliday junction-type%2C YqgF-like~manually curated~PFAM: Uncharacterised protein family (UPF0081)~TIGRFAM: RNAse H-fold protein YqgF gene gene1974 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1944 Sgly_1945 Sgly_1945 Sgly_1945 1959390 1960334 - aldo/keto reductase COGs: COG1453 oxidoreductase of the aldo/keto reductase family~InterPro IPR001395~KEGG: dsy:DSY2419 hypothetical protein~PFAM: Aldo/keto reductase~SPTR: Putative uncharacterized protein%3B~PFAM: Aldo/keto reductase family gene gene1975 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1945 Sgly_1946 Sgly_1946 Sgly_1946 1960403 1960657 - UPF0297 protein COGs: COG4472 conserved hypothetical protein~HAMAP: UPF0297 protein~InterPro IPR009309~KEGG: dhd:Dhaf_3564 hypothetical protein~PFAM: Protein of unknown function DUF965%2C bacterial~SPTR: UPF0297 protein Dhaf_3564%3B~PFAM: Bacterial protein of unknown function (DUF965) gene gene1976 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1946 Sgly_1947 Sgly_1947 Sgly_1947 1960816 1963443 - alanyl-tRNA synthetase COGs: COG0013 Alanyl-tRNA synthetase~InterPro IPR002318: IPR018164: IPR012947: IPR003156~KEGG: dhd:Dhaf_3565 alanyl-tRNA synthetase~PFAM: Alanyl-tRNA synthetase%2C class IIc%2C N-terminal%3B Threonyl/alanyl tRNA synthetase%2C SAD%3B Phosphoesterase%2C DHHA1~SPTR: Alanyl-tRNA synthetase%3B~TIGRFAM: Alanyl-tRNA synthetase%2C class IIc~PFAM: DHHA1 domain%3B Threonyl and Alanyl tRNA synthetase second additional domain%3B tRNA synthetases class II (A)~TIGRFAM: alanine--tRNA ligase gene gene1977 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1947 Sgly_1948 Sgly_1948 Sgly_1948 1963569 1964618 - protein of unknown function UPF0118 COGs: COG0628 permease~InterPro IPR002549~KEGG: dhd:Dhaf_3575 protein of unknown function UPF0118~PFAM: Uncharacterised protein family UPF0118~SPTR: Putative uncharacterized protein%3B~PFAM: Domain of unknown function DUF20 gene gene1978 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1948 Sgly_1949 Sgly_1949 Sgly_1949 1964709 1964918 - hypothetical protein KEGG: dhd:Dhaf_3577 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1979 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1949 Sgly_1950 Sgly_1950 Sgly_1950 1964924 1965379 - PRC-barrel domain protein COGs: COG3881 conserved hypothetical protein~InterPro IPR007903~KEGG: dhd:Dhaf_3578 hypothetical protein~PFAM: PRC-barrel~SPTR: Putative uncharacterized protein%3B~PFAM: PRC-barrel domain gene gene1980 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1950 Sgly_1951 Sgly_1951 Sgly_1951 1965451 1965825 - FeS cluster assembly scaffold protein NifU COGs: COG0822 NifU homolog involved in Fe-S cluster formation~InterPro IPR017787: IPR002871~KEGG: dhd:Dhaf_3580 FeS cluster assembly scaffold protein NifU~PFAM: NIF system FeS cluster assembly%2C NifU%2C N-terminal~SPTR: FeS cluster assembly scaffold protein NifU%3B~TIGRFAM: NIF system FeS cluster assembly%2C NifU-like~PFAM: NifU-like N terminal domain~TIGRFAM: FeS cluster assembly scaffold IscU%3B FeS cluster assembly scaffold protein NifU%2C Clostridium type gene gene1981 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1951 Sgly_1952 Sgly_1952 Sgly_1952 1965921 1967090 - cysteine desulfurase NifS COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase~InterPro IPR017772: IPR000192~KEGG: dhd:Dhaf_3581 cysteine desulfurase NifS~PFAM: Aminotransferase%2C class V/Cysteine desulfurase~PRIAM: Cysteine desulfurase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Cysteine desulfurase%2C NifS%2C bacterial/archaeal~PFAM: Aminotransferase class-V~TIGRFAM: cysteine desulfurase NifS gene gene1982 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1952 Sgly_1953 Sgly_1953 Sgly_1953 1967107 1967604 - transcriptional regulator%2C BadM/Rrf2 family COGs: COG1959 transcriptional regulator protein~InterPro IPR000944~KEGG: dhd:Dhaf_3582 transcriptional regulator%2C BadM/Rrf2 family~PFAM: Transcription regulator Rrf2~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Transcription regulator Rrf2~manually curated~PFAM: Transcriptional regulator~TIGRFAM: rrf2 family protein (putative transcriptional regulator) gene gene1983 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1953 Sgly_1954 Sgly_1954 Sgly_1954 1967775 1969079 + Recombination protein MgsA COGs: COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase~InterPro IPR003593: IPR003959~KEGG: dhd:Dhaf_3583 recombination factor protein RarA~PFAM: ATPase%2C AAA-type%2C core~SMART: ATPase%2C AAA+ type%2C core~SPTR: AAA ATPase central domain protein%3B~PFAM: MgsA AAA+ ATPase C terminal%3B Holliday junction DNA helicase ruvB N-terminus gene gene1984 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1954 Sgly_1955 Sgly_1955 Sgly_1955 1969260 1969946 - hypothetical protein KEGG: pmx:PERMA_0910 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Predicted metal-binding protein (DUF2103) gene gene1985 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1955 Sgly_1956 Sgly_1956 Sgly_1956 1969953 1970462 - phosphodiesterase%2C MJ0936 family COGs: COG0622 phosphoesterase~InterPro IPR000979: IPR004843~KEGG: dsy:DSY1878 hypothetical protein~PFAM: Metallophosphoesterase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Phosphodiesterase MJ0936~TIGRFAM: phosphoesterase%2C MJ0936 family gene gene1986 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1956 Sgly_1957 Sgly_1957 Sgly_1957 1970561 1970911 - hypothetical protein KEGG: dhd:Dhaf_3038 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1987 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1957 Sgly_1958 Sgly_1958 Sgly_1958 1971074 1971517 + protein of unknown function DUF606 COGs: COG3238 conserved hypothetical protein~InterPro IPR006750~KEGG: dhd:Dhaf_3039 protein of unknown function DUF606~PFAM: Protein of unknown function DUF606~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function%2C DUF606 gene gene1988 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1958 Sgly_1959 Sgly_1959 Sgly_1959 1971514 1972008 - hypothetical protein KEGG: dhd:Dhaf_3040 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1989 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1959 Sgly_1960 Sgly_1960 Sgly_1960 1972167 1973930 + Excinuclease ABC subunit C COGs: COG0322 Nuclease subunit of the excinuclease complex~HAMAP: Excinuclease ABC%2C C subunit~InterPro IPR004791: IPR000305: IPR001943: IPR001162~KEGG: dhd:Dhaf_3041 excinuclease ABC subunit C~PFAM: Excinuclease ABC%2C C subunit%2C C-terminal%3B Excinuclease ABC%2C C subunit%2C N-terminal%3B UvrB/UvrC protein~SMART: Excinuclease ABC%2C C subunit%2C N-terminal~SPTR: UvrABC system protein C%3B~TIGRFAM: Excinuclease ABC%2C C subunit~PFAM: UvrB/uvrC motif%3B UvrC Helix-hairpin-helix N-terminal%3B GIY-YIG catalytic domain~TIGRFAM: excinuclease ABC%2C C subunit gene gene1990 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1960 Sgly_1961 Sgly_1961 Sgly_1961 1974004 1974918 + Peptidase M23 COGs: COG0739 Membrane protein related to metalloendopeptidase~InterPro IPR016047~KEGG: dhd:Dhaf_4435 peptidase M23~PFAM: Peptidase M23~SPTR: Putative uncharacterized protein%3B~PFAM: Peptidase family M23 gene gene1991 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1961 Sgly_1962 Sgly_1962 Sgly_1962 1974921 1975373 + protein of unknown function DUF583 COGs: COG1664 Integral membrane protein CcmA involved in cell shape determination~InterPro IPR007607~KEGG: dhd:Dhaf_4436 protein of unknown function DUF583~PFAM: Protein of unknown function DUF583~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function%2C DUF583 gene gene1992 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1962 Sgly_1963 Sgly_1963 Sgly_1963 1975441 1976691 - adenosylhomocysteinase COGs: COG0499 S-adenosylhomocysteine hydrolase~HAMAP: Adenosylhomocysteinase~InterPro IPR000043: IPR015878~KEGG: dsy:DSY1889 S-adenosyl-L-homocysteine hydrolase~PFAM: S-adenosyl-L-homocysteine hydrolase%2C NAD binding%3B S-adenosyl-L-homocysteine hydrolase~PRIAM: Adenosylhomocysteinase~SPTR: Adenosylhomocysteinase%3B~TIGRFAM: S-adenosyl-L-homocysteine hydrolase~PFAM: S-adenosyl-L-homocysteine hydrolase%2C NAD binding domain%3B S-adenosyl-L-homocysteine hydrolase~TIGRFAM: adenosylhomocysteinase gene gene1993 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1963 Sgly_1964 Sgly_1964 Sgly_1964 1976780 1977622 - ATPase-like%2C ParA/MinD COGs: COG0489 ATPase involved in chromosome partitioning~InterPro IPR019591~KEGG: dhd:Dhaf_3049 Mrp protein~PFAM: ATPase-like%2C ParA/MinD~SPTR: Putative uncharacterized protein%3B~PFAM: ParA/MinD ATPase like%3B Anion-transporting ATPase gene gene1994 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1964 Sgly_1965 Sgly_1965 Sgly_1965 1977733 1979535 - oligopeptidase F COGs: COG1164 Oligoendopeptidase F~InterPro IPR004438: IPR013647: IPR001567~KEGG: dhd:Dhaf_3050 oligoendopeptidase F~PFAM: Peptidase M3A/M3B%2C thimet/oligopeptidase F%3B Peptidase M3B%2C oligopeptidase F%2C N-terminal~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Peptidase M3B%2C oligoendopeptidase F~PFAM: Oligopeptidase F%3B Peptidase family M3~TIGRFAM: oligoendopeptidase F gene gene1995 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1965 Sgly_1966 Sgly_1966 Sgly_1966 1979593 1980069 - adenylate cyclase COGs: COG2954 conserved hypothetical protein~InterPro IPR008172~KEGG: mrb:Mrub_2714 adenylate cyclase~PFAM: Adenylate cyclase~SPTR: Adenylate cyclase gene gene1996 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1966 Sgly_1967 Sgly_1967 Sgly_1967 1980276 1981763 - L-threonine synthase COGs: COG0498 Threonine synthase~InterPro IPR004450: IPR001926~KEGG: dhd:Dhaf_3053 threonine synthase~PFAM: Pyridoxal phosphate-dependent enzyme%2C beta subunit~PRIAM: Threonine synthase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Threonine synthase~PFAM: Pyridoxal-phosphate dependent enzyme~TIGRFAM: threonine synthase gene gene1997 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1967 Sgly_1968 Sgly_1968 Sgly_1968 1981935 1983335 + pseudogene gene1998 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1968 Sgly_1969 Sgly_1969 Sgly_1969 1983364 1983993 + endonuclease III%3B DNA-(apurinic or apyrimidinic site) lyase COGs: COG0177 EndoIII-related endonuclease~InterPro IPR005759: IPR003265: IPR003651~KEGG: clj:CLJU_c39270 endonuclease III~PFAM: HhH-GPD domain%3B Endonuclease III-like%2C iron-sulphur cluster loop motif~PRIAM: DNA-(apurinic or apyrimidinic site) lyase~SMART: HhH-GPD domain%3B Endonuclease III-like%2C iron-sulphur cluster loop motif~SPTR: Endonuclease III%3B~TIGRFAM: Endonuclease III/Nth~PFAM: HhH-GPD superfamily base excision DNA repair protein%3B Helix-hairpin-helix motif~TIGRFAM: endonuclease III gene gene1999 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1969 Sgly_1970 Sgly_1970 Sgly_1970 1984004 1984465 - hypothetical protein KEGG: ctc:CTC01507 methyl-accepting chemotaxis protein~SPTR: Methyl-accepting chemotaxis protein gene gene2000 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1970 Sgly_1971 Sgly_1971 Sgly_1971 1984860 1985651 + NLP/P60 protein COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein)~InterPro IPR000064~KEGG: dhd:Dhaf_3253 NLP/P60 protein~PFAM: NLP/P60~SPTR: Putative uncharacterized protein%3B~PFAM: NlpC/P60 family gene gene2001 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1971 Sgly_1972 Sgly_1972 Sgly_1972 1985872 1987932 - sulfatase COGs: COG1368 Phosphoglycerol transferase and related protein alkaline phosphatase superfamily~InterPro IPR000917~KEGG: bal:BACI_c47770 putative sulfatase~PFAM: Sulfatase~SPTR: Putative uncharacterized protein%3B~PFAM: Sulfatase gene gene2002 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1972 Sgly_1973 Sgly_1973 Sgly_1973 1988472 1989626 - glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: dhd:Dhaf_3604 glycosyl transferase group 1~PFAM: Glycosyl transferase%2C group 1~SPTR: Putative uncharacterized protein%3B~PFAM: Glycosyl transferases group 1 gene gene2003 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1973 Sgly_1974 Sgly_1974 Sgly_1974 1989574 1990209 - hypothetical protein KEGG: ccb:Clocel_0618 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2004 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1974 Sgly_1975 Sgly_1975 Sgly_1975 1990214 1990396 - hypothetical protein SPTR: Transposase IS66 gene gene2005 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1975 Sgly_1976 Sgly_1976 Sgly_1976 1991369 1992559 - transposase mutator type COGs: COG3328 Transposase and inactivated derivatives~InterPro IPR001207~KEGG: dap:Dacet_1494 transposase mutator type~PFAM: Transposase%2C mutator type~SPTR: Transposase mutator type%3B~PFAM: Transposase%2C Mutator family gene gene2006 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1976 Sgly_1977 Sgly_1977 Sgly_1977 1992900 1993088 - hypothetical protein KEGG: cac:CA_C2106 hypothetical protein~SPTR: Predicted membrane protein gene gene2007 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1977 Sgly_1978 Sgly_1978 Sgly_1978 1993192 1993914 - hypothetical protein KEGG: npu:Npun_F0296 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2008 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1978 Sgly_1979 Sgly_1979 Sgly_1979 1994299 1994757 - hypothetical protein KEGG: swo:Swol_0285 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2009 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1979 Sgly_1980 Sgly_1980 Sgly_1980 1994806 1995219 - transcriptional regulator%2C MerR family COGs: COG0789 transcriptional regulator protein~InterPro IPR000551~KEGG: ttm:Tthe_0875 transcriptional regulator%2C MerR family~PFAM: HTH transcriptional regulator%2C MerR~SMART: HTH transcriptional regulator%2C MerR~SPTR: Transcriptional regulator%2C MerR family%3B~PFAM: MerR family regulatory protein%3B MerR%2C DNA binding gene gene2010 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1980 Sgly_1981 Sgly_1981 Sgly_1981 1995285 1996418 - aldo/keto reductase COGs: COG1453 oxidoreductase of the aldo/keto reductase family~InterPro IPR001395~KEGG: ckr:CKR_0282 hypothetical protein~PFAM: Aldo/keto reductase~SPTR: Putative uncharacterized protein%3B~PFAM: Aldo/keto reductase family gene gene2011 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1981 Sgly_1982 Sgly_1982 Sgly_1982 1996605 1998089 - hypothetical protein KEGG: ckr:CKR_3005 hypothetical protein~SPTR: Putative membrane protein gene gene2012 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1982 Sgly_1983 Sgly_1983 Sgly_1983 1998086 1998301 - transcriptional regulator COGs: COG3655 transcriptional regulator protein~InterPro IPR001387~KEGG: cce:Ccel_3417 transcriptional regulator%2C XRE family~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3~SPTR: Putative uncharacterized protein%3B~PFAM: Helix-turn-helix gene gene2013 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1983 Sgly_1984 Sgly_1984 Sgly_1984 1998315 1998761 - hypothetical protein KEGG: sgo:SGO_0186 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF3036) gene gene2014 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1984 Sgly_1985 Sgly_1985 Sgly_1985 1999239 1999502 - protein of unknown function DUF156 COGs: COG1937 conserved hypothetical protein~InterPro IPR003735~KEGG: apr:Apre_0988 protein of unknown function DUF156~PFAM: Protein of unknown function DUF156~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterised BCR%2C COG1937 gene gene2015 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1985 Sgly_1986 Sgly_1986 Sgly_1986 1999534 1999761 - Heavy metal transport/detoxification protein InterPro IPR006121~KEGG: mla:Mlab_1233 hypothetical protein~PFAM: Heavy metal transport/detoxification protein~SPTR: Putative uncharacterized protein%3B~PFAM: Heavy-metal-associated domain gene gene2016 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1986 Sgly_1987 Sgly_1987 Sgly_1987 1999788 2002118 - heavy metal translocating P-type ATPase COGs: COG2217 Cation transport ATPase~InterPro IPR006403: IPR006416: IPR001757: IPR006121: IPR 008250: IPR005834~KEGG: abu:Abu_0480 heavy-metal transporting P-type ATPase~PFAM: ATPase%2C P-type%2C ATPase-associated domain%3B Heavy metal transport/detoxification protein%3B Haloacid dehalogenase-like hydrolase~PRIAM: Copper-exporting ATPase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: ATPase%2C P-type%2C heavy metal translocating%3B ATPase%2C P type%2C cation/copper-transporter%3B ATPase%2C P-type%2C K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter~PFAM: E1-E2 ATPase%3B Heavy-metal-associated domain%3B haloacid dehalogenase-like hydrolase~TIGRFAM: copper-(or silver)-translocating P-type ATPase%3B heavy metal translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC gene gene2017 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1987 Sgly_1988 Sgly_1988 Sgly_1988 2002223 2003701 - ABC transporter related protein COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains~InterPro IPR003593: IPR003439~KEGG: dae:Dtox_1612 ABC transporter related~PFAM: ABC transporter-like~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related%3B~PFAM: ABC transporter gene gene2018 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1988 Sgly_1989 Sgly_1989 Sgly_1989 2003984 2004895 - GCN5-related N-acetyltransferase InterPro IPR000182~KEGG: drm:Dred_2229 hypothetical protein~PFAM: GCN5-related N-acetyltransferase~SPTR: Putative uncharacterized protein%3B~PFAM: Acetyltransferase (GNAT) family gene gene2019 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1989 Sgly_1990 Sgly_1990 Sgly_1990 2004904 2005806 - hypothetical protein COGs: COG4866 conserved hypothetical protein~KEGG: drm:Dred_2230 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterized conserved protein (DUF2156) gene gene2020 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1990 Sgly_1991 Sgly_1991 Sgly_1991 2006155 2006544 + pseudogene gene2021 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1991 Sgly_1992 Sgly_1992 Sgly_1992 2006861 2007142 - Transglycosylase-associated protein InterPro IPR007341~KEGG: fma:FMG_0439 hypothetical protein~PFAM: Transglycosylase-associated protein~SPTR: Membrane protein%3B~PFAM: Transglycosylase associated protein gene gene2022 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1992 Sgly_1993 Sgly_1993 Sgly_1993 2007400 2008323 + RND family efflux transporter MFP subunit COGs: COG0845 Membrane-fusion protein~KEGG: aoe:Clos_1199 RND family efflux transporter MFP subunit~SPTR: Biotin-requiring enzyme gene gene2023 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1993 Sgly_1994 Sgly_1994 Sgly_1994 2008307 2008987 + Phosphonate-transporting ATPase COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: aoe:Clos_1200 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Phosphonate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related%3B~PFAM: ABC transporter gene gene2024 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1994 Sgly_1995 Sgly_1995 Sgly_1995 2008991 2010163 + protein of unknown function DUF214 COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component~InterPro IPR003838~KEGG: aoe:Clos_1201 hypothetical protein~PFAM: Protein of unknown function DUF214%2C permase predicted~SPTR: Putative uncharacterized protein%3B~PFAM: Predicted permease gene gene2025 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1995 Sgly_1996 Sgly_1996 Sgly_1996 2010158 2012005 - diguanylate cyclase/phosphodiesterase COGs: COG2200 FOG: EAL domain~InterPro IPR000160: IPR001633: IPR004010~KEGG: ckr:CKR_1648 hypothetical protein~PFAM: Diguanylate phosphodiesterase%2C predicted%3B Cache%3B Diguanylate cyclase%2C predicted~SMART: Diguanylate cyclase%2C predicted%3B Diguanylate phosphodiesterase%2C predicted~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Diguanylate cyclase%2C predicted~PFAM: EAL domain%3B GGDEF domain~TIGRFAM: diguanylate cyclase (GGDEF) domain gene gene2026 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1996 Sgly_1997 Sgly_1997 Sgly_1997 2012439 2013119 + Uracil-DNA glycosylase COGs: COG0692 Uracil DNA glycosylase~HAMAP: Uracil-DNA glycosylase~InterPro IPR002043: IPR005122~KEGG: dhd:Dhaf_2288 uracil-DNA glycosylase~PFAM: Uracil-DNA glycosylase-like~SPTR: Uracil-DNA glycosylase%3B~TIGRFAM: Uracil-DNA glycosylase~PFAM: Uracil DNA glycosylase superfamily~TIGRFAM: uracil-DNA glycosylase gene gene2027 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1997 Sgly_1998 Sgly_1998 Sgly_1998 2013176 2014102 - hypothetical protein KEGG: clj:CLJU_c15710 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2028 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1998 Sgly_1999 Sgly_1999 Sgly_1999 2014105 2014650 - RNA polymerase%2C sigma-24 subunit%2C RpoE COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog~InterPro IPR014284: IPR007627: IPR013249~KEGG: clj:CLJU_c15700 putative sigma 70 subunit of a RNA polymerase~PFAM: RNA polymerase sigma-70 region 2%3B RNA polymerase sigma factor 70%2C region 4 type 2~SPTR: Predicted sigma 70 subunit of a RNA polymerase%3B~TIGRFAM: RNA polymerase sigma-70~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family%3B RNA polymerase sigma-70 factor%2C TIGR02952 family gene gene2029 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_1999 Sgly_2000 Sgly_2000 Sgly_2000 2014822 2015142 - UPF0145 protein ybjQ COGs: COG0393 conserved hypothetical protein~HAMAP: UPF0145 protein ybjQ~InterPro IPR002765~KEGG: dhd:Dhaf_3855 protein of unknown function DUF74~PFAM: Uncharacterised protein family UPF0145~SPTR: UPF0145 protein Dhaf_3855%3B~PFAM: Domain of unknown function (DUF74) gene gene2030 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2000 Sgly_2001 Sgly_2001 Sgly_2001 2015243 2015698 - protein of unknown function DUF1232 InterPro IPR010652~KEGG: swo:Swol_2259 hypothetical protein~PFAM: Protein of unknown function DUF1232~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1232) gene gene2031 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2001 Sgly_2002 Sgly_2002 Sgly_2002 2015886 2017763 - hypothetical protein KEGG: dae:Dtox_2058 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2032 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2002 Sgly_2003 Sgly_2003 Sgly_2003 2017763 2018539 - Sulfate-transporting ATPase COGs: COG1131 ABC-type multidrug transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: dae:Dtox_2057 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Sulfate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related%3B~PFAM: ABC transporter gene gene2033 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2003 Sgly_2004 Sgly_2004 Sgly_2004 2018799 2019293 + hypothetical protein KEGG: cth:Cthe_0671 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2034 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2004 Sgly_2005 Sgly_2005 Sgly_2005 2019297 2019782 + hypothetical protein KEGG: cth:Cthe_0671 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2035 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2005 Sgly_2006 Sgly_2006 Sgly_2006 2019779 2020972 - peptidase M24 COGs: COG0006 Xaa-Pro aminopeptidase~InterPro IPR000994~KEGG: cce:Ccel_0565 peptidase M24~PFAM: Peptidase M24%2C structural domain~SPTR: Peptidase M24%3B~PFAM: Metallopeptidase family M24%3B Creatinase/Prolidase N-terminal domain gene gene2036 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2006 Sgly_2007 Sgly_2007 Sgly_2007 2021002 2021193 - pseudogene gene2037 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2007 Sgly_2008 Sgly_2008 Sgly_2008 2021200 2021991 - hypothetical protein KEGG: cac:CA_C0467 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF2837) gene gene2038 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2008 Sgly_2009 Sgly_2009 Sgly_2009 2022030 2022137 - hypothetical protein gene gene2039 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2009 Sgly_2010 Sgly_2010 Sgly_2010 2022284 2023657 + MATE efflux family protein COGs: COG0534 Na+-driven multidrug efflux pump~InterPro IPR002528~KEGG: dhd:Dhaf_1652 MATE efflux family protein~PFAM: Multi antimicrobial extrusion protein MatE~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Multi antimicrobial extrusion protein MatE~PFAM: MatE~TIGRFAM: putative efflux protein%2C MATE family gene gene2040 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2010 Sgly_2011 Sgly_2011 Sgly_2011 2023774 2024253 + protein of unknown function DUF456 COGs: COG2839 conserved hypothetical protein~InterPro IPR007403~KEGG: dsy:DSY1414 hypothetical protein~PFAM: Protein of unknown function DUF456~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF456) gene gene2041 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2011 Sgly_2012 Sgly_2012 Sgly_2012 2024456 2024638 - hypothetical protein KEGG: cbe:Cbei_1260 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2042 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2012 Sgly_2013 Sgly_2013 Sgly_2013 2024684 2024989 - helix-turn-helix domain protein InterPro IPR001387~KEGG: drm:Dred_0874 helix-turn-helix domain-containing protein~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3~SPTR: Helix-turn-helix domain protein%3B~PFAM: Helix-turn-helix gene gene2043 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2013 Sgly_2014 Sgly_2014 Sgly_2014 2025124 2025366 + helix-turn-helix domain protein InterPro IPR001387~KEGG: oih:OB1344 hypothetical protein~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3~SPTR: Putative uncharacterized protein%3B~PFAM: Helix-turn-helix gene gene2044 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2014 Sgly_2015 Sgly_2015 Sgly_2015 2025359 2025586 + hypothetical protein KEGG: wch:wcw_0957 putative thymidylate kinase gene gene2045 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2015 Sgly_2016 Sgly_2016 Sgly_2016 2025741 2027231 + IMP dehydrogenase COGs: COG0516 IMP dehydrogenase/GMP reductase~InterPro IPR000644: IPR001093~KEGG: cce:Ccel_0394 inosine 5-monophosphate dehydrogenase~PFAM: IMP dehydrogenase/GMP reductase%3B Cystathionine beta-synthase%2C core~PRIAM: IMP dehydrogenase~SPTR: IMP dehydrogenase/GMP reductase%3B~PFAM: CBS domain%3B IMP dehydrogenase / GMP reductase domain~TIGRFAM: inosine-5'-monophosphate dehydrogenase gene gene2046 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2016 Sgly_2017 Sgly_2017 Sgly_2017 2027300 2027839 - GCN5-related N-acetyltransferase InterPro IPR000182~KEGG: dae:Dtox_3897 GCN5-related N-acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: GCN5-related N-acetyltransferase%3B~PFAM: Acetyltransferase (GNAT) family gene gene2047 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2017 Sgly_2018 Sgly_2018 Sgly_2018 2027878 2028225 - hypothetical protein KEGG: eel:EUBELI_20143 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: PAS fold gene gene2048 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2018 Sgly_2019 Sgly_2019 Sgly_2019 2028324 2029031 - Methyltransferase type 12 COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis~InterPro IPR013217~KEGG: mac:MA1733 hypothetical protein~PFAM: Methyltransferase type 12~SPTR: Putative uncharacterized protein%3B~PFAM: Methyltransferase domain gene gene2049 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2019 Sgly_2020 Sgly_2020 Sgly_2020 2029170 2030039 - 3-oxoacyl-(acyl-carrier-protein) reductase COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)~InterPro IPR002198~KEGG: dsy:DSY1452 hypothetical protein~PFAM: Short-chain dehydrogenase/reductase SDR~PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase~SPTR: Putative uncharacterized protein%3B~PFAM: short chain dehydrogenase gene gene2050 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2020 Sgly_2021 Sgly_2021 Sgly_2021 2030236 2031081 + RNA binding S1 domain protein COGs: COG2996 conserved hypothetical protein~InterPro IPR003029~KEGG: dhd:Dhaf_2903 RNA binding S1 domain protein~PFAM: Ribosomal protein S1%2C RNA binding domain~SPTR: RNA binding S1 domain protein%3B~PFAM: S1 RNA binding domain gene gene2051 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2021 Sgly_2022 Sgly_2022 Sgly_2022 2031128 2033305 - DNA topoisomerase III COGs: COG0550 Topoisomerase IA~InterPro IPR005738: IPR006154: IPR003601: IPR003602: IPR 006171: IPR013497~KEGG: dhd:Dhaf_4786 DNA topoisomerase III~PFAM: DNA topoisomerase%2C type IA%2C central%3B Toprim domain~PRIAM: DNA topoisomerase~SMART: DNA topoisomerase%2C type IA%2C DNA-binding%3B DNA topoisomerase%2C type IA%2C domain 2%3B Toprim domain%2C subgroup~SPTR: DNA topoisomerase%3B~TIGRFAM: DNA topoisomerase III%2C bacterial-type~PFAM: Toprim domain%3B NAD/NADP octopine/nopaline dehydrogenase%2C alpha-helical domain%3B DNA topoisomerase~TIGRFAM: DNA topoisomerase I%2C archaeal%3B DNA topoisomerase III%2C bacteria and conjugative plasmid gene gene2052 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2022 Sgly_2023 Sgly_2023 Sgly_2023 2033397 2033687 - hypothetical protein KEGG: bfo:BRAFLDRAFT_119859 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2053 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2023 Sgly_2024 Sgly_2024 Sgly_2024 2033717 2033947 - hypothetical protein KEGG: nve:NEMVE_v1g9597 hypothetical protein~SPTR: Predicted protein gene gene2054 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2024 Sgly_2025 Sgly_2025 Sgly_2025 2034107 2034205 + hypothetical protein KEGG: dhd:Dhaf_2821 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2055 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2025 Sgly_2026 Sgly_2026 Sgly_2026 2034239 2034352 + hypothetical protein KEGG: dhd:Dhaf_2822 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2056 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2026 Sgly_2027 Sgly_2027 Sgly_2027 2034432 2034746 - hypothetical protein KEGG: cfa:484093 radial spoke head 4 homolog A (Chlamydomonas)~SPTR: Putative uncharacterized protein gene gene2057 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2027 Sgly_2028 Sgly_2028 Sgly_2028 2034751 2035602 - nucleoside recognition domain protein InterPro IPR011642~KEGG: bld:BLi03744 YvoD~PFAM: Nucleoside recognition~SPTR: Conserved membrane protein YvoD%3B~PFAM: Nucleoside recognition gene gene2058 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2028 Sgly_2029 Sgly_2029 Sgly_2029 2035688 2035993 - hypothetical protein KEGG: lmy:LM5923_1823 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2059 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2029 Sgly_2030 Sgly_2030 Sgly_2030 2036107 2037306 - Lactate utilization protein B/C COGs: COG1139 conserved hypothetical protein containing a ferredoxin-like domain~InterPro IPR003741~KEGG: chy:CHY_0147 iron-sulfur cluster-binding protein~PFAM: Lactate utilization protein B/C~SPTR: Iron-sulfur cluster-binding protein%3B~PFAM: Uncharacterised ACR%2C YkgG family COG1556~TIGRFAM: iron-sulfur cluster-binding protein gene gene2060 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2030 Sgly_2031 Sgly_2031 Sgly_2031 2037290 2038294 - protein of unknown function DUF224 cysteine-rich region domain protein COGs: COG0247 Fe-S oxidoreductase~InterPro IPR004017~KEGG: dhd:Dhaf_2911 protein of unknown function DUF224 cysteine-rich region domain protein~PFAM: Cysteine-rich domain~SPTR: Putative uncharacterized protein%3B~manually curated~PFAM: Cysteine-rich domain gene gene2061 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2031 Sgly_2032 Sgly_2032 Sgly_2032 2038553 2039428 + SPFH domain%2C Band 7 family protein COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs~InterPro IPR001107~KEGG: dhd:Dhaf_0815 band 7 protein~PFAM: Band 7 protein~SMART: Band 7 protein~SPTR: Putative uncharacterized protein%3B~PFAM: SPFH domain / Band 7 family gene gene2062 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2032 Sgly_2033 Sgly_2033 Sgly_2033 2039778 2041796 + BclB C-terminal domain protein InterPro IPR021210: IPR008160~KEGG: dhd:Dhaf_0887 collagen triple helix repeat protein~PFAM: Collagen triple helix repeat~SPTR: Collagen triple helix repeat protein%3B~TIGRFAM: Exosporium BclB%2C C-terminal~PFAM: Collagen triple helix repeat (20 copies)~TIGRFAM: BclB C-terminal domain gene gene2063 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2033 Sgly_2034 Sgly_2034 Sgly_2034 2041960 2043639 + Collagen triple helix repeat-containing protein InterPro IPR008160~KEGG: cbe:Cbei_2587 triple helix repeat-containing collagen~PFAM: Collagen triple helix repeat~SPTR: Collagen triple helix repeat protein%3B~PFAM: C1q domain%3B Collagen triple helix repeat (20 copies) gene gene2064 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2034 Sgly_2035 Sgly_2035 Sgly_2035 2043808 2044725 + hypothetical protein KEGG: cce:Ccel_3349 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2065 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2035 Sgly_2036 Sgly_2036 Sgly_2036 2044840 2045409 - hypothetical protein KEGG: ttm:Tthe_2064 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2066 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2036 Sgly_2037 Sgly_2037 Sgly_2037 2045438 2046010 - hypothetical protein KEGG: ttm:Tthe_2064 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2067 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2037 Sgly_2038 Sgly_2038 Sgly_2038 2046235 2047479 + hypothetical protein KEGG: dol:Dole_2286 YadA domain-containing protein~SPTR: Putative uncharacterized protein gene gene2068 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2038 Sgly_2039 Sgly_2039 Sgly_2039 2047624 2049456 + glycosyl transferase family 2 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis~InterPro IPR019734: IPR001173: IPR001440~KEGG: clj:CLJU_c04550 putative glycosyltransferase~PFAM: Glycosyl transferase%2C family 2%3B Tetratricopeptide TPR-1~SMART: Tetratricopeptide repeat~SPTR: Glycosyl transferase family 2%3B~PFAM: Glycosyl transferase family 2%3B Tetratricopeptide repeat gene gene2069 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2039 Sgly_2040 Sgly_2040 Sgly_2040 2049548 2058049 - glycosyltransferase 36 COGs: COG3459 Cellobiose phosphorylase~InterPro IPR009342: IPR010383: IPR010403~KEGG: tte:TTE2146 cyclic beta 1-2 glucan synthetase~PFAM: Glycosyltransferase 36%3B Putative carbohydrate binding%3B Glycosyltransferase 36 associated~SPTR: Glycosyltransferase family 36%3B~PFAM: Uncharacterized protein conserved in bacteria (DUF2329)%3B Glycosyltransferase family 36%3B Putative carbohydrate binding domain%3B Glycosyltransferase 36 associated family gene gene2070 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2040 Sgly_2041 Sgly_2041 Sgly_2041 2058181 2060421 - cell division protein FtsK/SpoIIIE COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein~InterPro IPR003593: IPR002543: IPR018541~KEGG: dhd:Dhaf_2954 cell divisionFtsK/SpoIIIE~PFAM: Cell divisionFtsK/SpoIIIE%3B DNA translocase ftsK gamma~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: Ftsk gamma domain%3B FtsK/SpoIIIE family gene gene2071 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2041 Sgly_2042 Sgly_2042 Sgly_2042 2060461 2061312 - PHP domain protein COGs: COG0613 metal-dependent phosphoesterase (PHP family)~InterPro IPR003141: IPR004013~KEGG: dhd:Dhaf_2957 PHP domain protein~PFAM: PHP%2C C-terminal~SMART: Polymerase/histidinol phosphatase%2C N-terminal~SPTR: Putative uncharacterized protein%3B~PFAM: PHP domain gene gene2072 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2042 Sgly_2043 Sgly_2043 Sgly_2043 2061742 2062977 + transposase mutator type COGs: COG3328 Transposase and inactivated derivatives~InterPro IPR001207~KEGG: nth:Nther_1079 transposase mutator type~PFAM: Transposase%2C mutator type~SPTR: Transposase%3B~PFAM: Transposase%2C Mutator family gene gene2074 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2043 Sgly_2044 Sgly_2044 Sgly_2044 2063762 2064904 - hypothetical protein KEGG: toc:Toce_2214 hypothetical protein~SPTR: Putative lipoprotein gene gene2075 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2044 Sgly_2045 Sgly_2045 Sgly_2045 2064904 2065764 - hypothetical protein KEGG: mta:Moth_0956 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2076 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2045 Sgly_2046 Sgly_2046 Sgly_2046 2065863 2066384 - hypothetical protein KEGG: mta:Moth_0955 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2077 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2046 Sgly_2047 Sgly_2047 Sgly_2047 2066381 2066953 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog~InterPro IPR014284: IPR007627: IPR013249~KEGG: toc:Toce_2217 RNA polymerase%2C sigma-24 subunit%2C ECF subfamily~PFAM: RNA polymerase sigma-70 region 2%3B RNA polymerase sigma factor 70%2C region 4 type 2~SPTR: RNA polymerase%2C sigma-24 subunit%2C ECF subfamily%3B~TIGRFAM: RNA polymerase sigma-70~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family gene gene2078 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2047 Sgly_2048 Sgly_2048 Sgly_2048 2067059 2067448 - hypothetical protein KEGG: ssm:Spirs_3383 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2079 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2048 Sgly_2049 Sgly_2049 Sgly_2049 2067481 2068008 - nitroreductase COGs: COG0778 Nitroreductase~InterPro IPR000415~KEGG: aar:Acear_0810 nitroreductase~PFAM: Nitroreductase-like~SPTR: Nitroreductase%3B~PFAM: Nitroreductase family gene gene2080 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2049 Sgly_2050 Sgly_2050 Sgly_2050 2068178 2069167 - hydrogenase expression/formation protein HypE COGs: COG0309 Hydrogenase maturation factor~InterPro IPR011854: IPR000728: IPR010918~KEGG: cpy:Cphy_1741 hydrogenase expression/formation protein HypE~PFAM: AIR synthase related protein%2C C-terminal%3B AIR synthase related protein~SPTR: Hydrogenase expression/formation protein HypE%3B~TIGRFAM: Hydrogenase expression/formation protein HypE~PFAM: AIR synthase related protein%2C N-terminal domain%3B AIR synthase related protein%2C C-terminal domain~TIGRFAM: hydrogenase expression/formation protein HypE gene gene2081 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2050 Sgly_2051 Sgly_2051 Sgly_2051 2069189 2070232 - hydrogenase expression/formation protein HypD COGs: COG0409 Hydrogenase maturation factor~InterPro IPR002780~KEGG: cth:Cthe_3014 hydrogenase formation HypD protein~PFAM: Hydrogenase formation HypD protein~SPTR: Hydrogenase expression/formation protein HypD%3B~TIGRFAM: Hydrogenase formation HypD protein~PFAM: Hydrogenase formation hypA family~TIGRFAM: hydrogenase expression/formation protein HypD gene gene2082 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2051 Sgly_2052 Sgly_2052 Sgly_2052 2070229 2070447 - hydrogenase assembly chaperone hypC/hupF InterPro IPR001109~KEGG: cth:Cthe_3015 hydrogenase assembly chaperone HypC/HupF~PFAM: Hydrogenase expression/formation protein%2C HupF/HypC~SPTR: Hydrogenase assembly chaperone hypC/hupF%3B~TIGRFAM: Hydrogenase expression/formation protein%2C HupF/HypC~PFAM: HupF/HypC family~TIGRFAM: hydrogenase assembly chaperone HypC/HupF gene gene2083 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2052 Sgly_2053 Sgly_2053 Sgly_2053 2070669 2071319 - hydrogenase accessory protein HypB COGs: COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase~InterPro IPR004392: IPR003495~KEGG: cpy:Cphy_1737 hydrogenase accessory protein HypB~PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like~SPTR: Hydrogenase accessory protein HypB%3B~TIGRFAM: Hydrogenase accessory protein HypB~PFAM: CobW/HypB/UreG%2C nucleotide-binding domain~TIGRFAM: hydrogenase accessory protein HypB gene gene2084 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2053 Sgly_2054 Sgly_2054 Sgly_2054 2071334 2071678 - hydrogenase expression/synthesis HypA COGs: COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)~InterPro IPR000688~KEGG: cth:Cthe_3018 hydrogenase expression/synthesis%2C HypA~PFAM: Hydrogenase nickel incorporation protein HypA/HybF~SPTR: Hydrogenase expression/synthesis%2C HypA%3B~PFAM: Hydrogenase expression/synthesis hypA family~TIGRFAM: hydrogenase nickel insertion protein HypA gene gene2085 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2054 Sgly_2055 Sgly_2055 Sgly_2055 2071671 2072033 - hypothetical protein COGs: COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)~KEGG: mpi:Mpet_0464 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein~SPTR: 4Fe-4S ferredoxin%2C iron-sulfur binding gene gene2086 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2055 Sgly_2056 Sgly_2056 Sgly_2056 2072044 2073126 - ech hydrogenase subunit E COGs: COG3261 Ni Fe-hydrogenase III large subunit~InterPro IPR001501: IPR001135~KEGG: cpy:Cphy_1734 NADH-ubiquinone oxidoreductase chain 49kDa~PFAM: NADH-quinone oxidoreductase%2C subunit D%3B Nickel-dependent hydrogenase%2C large subunit~PRIAM: NADH dehydrogenase (quinone)~SPTR: NADH-ubiquinone oxidoreductase chain 49kDa%3B~PFAM: Respiratory-chain NADH dehydrogenase%2C 49 Kd subunit%3B Nickel-dependent hydrogenase gene gene2087 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2056 Sgly_2057 Sgly_2057 Sgly_2057 2073147 2073512 - NADH dehydrogenase (ubiquinone)%2C 30 kDa subunit KEGG: mbn:Mboo_0027 NADH dehydrogenase (ubiquinone)%2C 30 kDa subunit~SPTR: NADH dehydrogenase (Ubiquinone)%2C 30 kDa subunit%3B~PFAM: Respiratory-chain NADH dehydrogenase%2C 30 Kd subunit gene gene2088 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2057 Sgly_2058 Sgly_2058 Sgly_2058 2073513 2073950 - ech hydrogenase subunit C COGs: COG3260 Ni Fe-hydrogenase III small subunit~InterPro IPR006137~KEGG: mpi:Mpet_0467 NADH ubiquinone oxidoreductase 20 kDa subunit~PFAM: NADH:ubiquinone oxidoreductase-like%2C 20kDa subunit~PRIAM: NADH dehydrogenase (quinone)~SPTR: NADH ubiquinone oxidoreductase%2C 20 kDa subunit%3B~PFAM: NADH ubiquinone oxidoreductase%2C 20 Kd subunit gene gene2089 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2058 Sgly_2059 Sgly_2059 Sgly_2059 2073999 2074856 - ech hydrogenase subunit B COGs: COG0650 Formate hydrogenlyase subunit 4~InterPro IPR001694~KEGG: mem:Memar_0363 respiratory-chain NADH dehydrogenase%2C subunit 1~PFAM: NADH:ubiquinone oxidoreductase%2C subunit 1~SPTR: Ech hydrogenase subunit B%3B~PFAM: NADH dehydrogenase gene gene2090 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2059 Sgly_2060 Sgly_2060 Sgly_2060 2074856 2076751 - ech hydrogenase subunit A COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit~InterPro IPR001750~KEGG: mem:Memar_0364 NADH dehydrogenase (quinone)~PFAM: NADH:ubiquinone/plastoquinone oxidoreductase~PRIAM: NADH dehydrogenase (quinone)~SPTR: Ech hydrogenase subunit A%3B~PFAM: NADH-Ubiquinone/plastoquinone (complex I)%2C various chains%3B NADH-Ubiquinone oxidoreductase (complex I)%2C chain 5 N-terminus gene gene2091 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2060 Sgly_2061 Sgly_2061 Sgly_2061 2077269 2079275 - translation elongation factor 2 (EF-2/EF-G) COGs: COG0480 Translation elongation factors (GTPase)~InterPro IPR004540: IPR005225: IPR000795: IPR004161: IPR 005517: IPR000640~KEGG: dhd:Dhaf_2972 translation elongation factor G~PFAM: Translation elongation factor EFG/EF2%2C domain IV%3B Protein synthesis factor%2C GTP-binding%3B Translation elongation factor EFTu/EF1A%2C domain 2%3B Translation elongation factor EFG/EF2%2C C-terminal~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Translation elongation factor EFG/EF2%3B Small GTP-binding protein~PFAM: Elongation factor G C-terminus%3B Elongation factor Tu GTP binding domain%3B Elongation factor G%2C domain IV~TIGRFAM: translation elongation factor EF-G%3B small GTP-binding protein domain gene gene2092 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2061 Sgly_2062 Sgly_2062 Sgly_2062 2079488 2081026 + stage V sporulation protein B COGs: COG0534 Na+-driven multidrug efflux pump~InterPro IPR014249: IPR002797~KEGG: dhd:Dhaf_2974 stage V sporulation protein B~PFAM: Polysaccharide biosynthesis protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Sporulation stage V%2C protein B~PFAM: Polysaccharide biosynthesis protein~TIGRFAM: stage V sporulation protein B gene gene2093 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2062 Sgly_2063 Sgly_2063 Sgly_2063 2081080 2081328 - hypothetical protein KEGG: dhd:Dhaf_2976 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2094 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2063 Sgly_2064 Sgly_2064 Sgly_2064 2081325 2082101 - 5'-nucleotidase%3B exopolyphosphatase%3B 3'-nucleotidase COGs: COG0496 acid phosphatase~HAMAP: Survival protein SurE-like phosphatase/nucleotidase~InterPro IPR002828~KEGG: dhd:Dhaf_2978 stationary phase survival protein SurE~PFAM: Survival protein SurE-like phosphatase/nucleotidase~SPTR: 5'-nucleotidase surE%3B~TIGRFAM: Survival protein SurE-like phosphatase/nucleotidase~PFAM: Survival protein SurE~TIGRFAM: 5'/3'-nucleotidase SurE gene gene2095 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2064 Sgly_2065 Sgly_2065 Sgly_2065 2082160 2082726 - GTP cyclohydrolase I COGs: COG0302 GTP cyclohydrolase I~HAMAP: GTP cyclohydrolase I~InterPro IPR001474: IPR020602~KEGG: dsy:DSY1825 hypothetical protein~PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase~PRIAM: GTP cyclohydrolase I~SPTR: Putative uncharacterized protein%3B~TIGRFAM: GTP cyclohydrolase I~PFAM: GTP cyclohydrolase I~TIGRFAM: GTP cyclohydrolase I gene gene2096 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2065 Sgly_2066 Sgly_2066 Sgly_2066 2082818 2084005 - Tetratricopeptide TPR_1 repeat-containing protein InterPro IPR019734: IPR001440~KEGG: dhd:Dhaf_2981 tetratricopeptide TPR_2 repeat protein~PFAM: Tetratricopeptide TPR-1~SPTR: Tetratricopeptide TPR_2 repeat protein%3B~PFAM: Tetratricopeptide repeat gene gene2097 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2066 Sgly_2067 Sgly_2067 Sgly_2067 2084196 2085218 + hypothetical protein COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase~KEGG: dsy:DSY1832 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2098 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2067 Sgly_2068 Sgly_2068 Sgly_2068 2085342 2085773 - hypothetical protein KEGG: dhd:Dhaf_2990 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2099 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2068 Sgly_2069 Sgly_2069 Sgly_2069 2085917 2086756 - ketopantoate hydroxymethyltransferase COGs: COG0413 Ketopantoate hydroxymethyltransferase~HAMAP: Ketopantoate hydroxymethyltransferase~InterPro IPR003700~KEGG: ccb:Clocel_3770 3-methyl-2-oxobutanoate hydroxymethyltransferase~PFAM: Ketopantoate hydroxymethyltransferase~PRIAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase~SPTR: 3-methyl-2-oxobutanoate hydroxymethyltransferase%3B~TIGRFAM: Ketopantoate hydroxymethyltransferase~PFAM: Ketopantoate hydroxymethyltransferase~TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase gene gene2100 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2069 Sgly_2070 Sgly_2070 Sgly_2070 2086873 2087241 + hypothetical protein KEGG: dhd:Dhaf_2991 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2101 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2070 Sgly_2071 Sgly_2071 Sgly_2071 2087228 2088016 - Prolipoprotein diacylglyceryl transferase COGs: COG0682 Prolipoprotein diacylglyceryltransferase~HAMAP: Prolipoprotein diacylglyceryl transferase~InterPro IPR001640~KEGG: bts:Btus_2154 prolipoprotein diacylglyceryl transferase~PFAM: Prolipoprotein diacylglyceryl transferase~SPTR: Prolipoprotein diacylglyceryl transferase%3B~TIGRFAM: Prolipoprotein diacylglyceryl transferase~PFAM: Prolipoprotein diacylglyceryl transferase~TIGRFAM: prolipoprotein diacylglyceryl transferase gene gene2102 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2071 Sgly_2072 Sgly_2072 Sgly_2072 2088019 2090133 - cell division protein FtsA COGs: COG0849 Actin-like ATPase involved in cell division~InterPro IPR003494~KEGG: dhd:Dhaf_2994 cell division protein~PFAM: Cell division protein FtsA domain~SPTR: Cell division protein%3B~PFAM: Cell division protein FtsA~TIGRFAM: cell division protein FtsA gene gene2103 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2072 Sgly_2073 Sgly_2073 Sgly_2073 2090166 2091134 - 6-phosphofructokinase COGs: COG0205 6-phosphofructokinase~HAMAP: 6-phosphofructokinase~InterPro IPR012828: IPR000023~KEGG: dhd:Dhaf_2995 6-phosphofructokinase~PFAM: Phosphofructokinase~PRIAM: 6-phosphofructokinase~SPTR: 6-phosphofructokinase%3B~TIGRFAM: 6-phosphofructokinase~PFAM: Phosphofructokinase~TIGRFAM: 6-phosphofructokinase gene gene2104 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2073 Sgly_2074 Sgly_2074 Sgly_2074 2091177 2091773 - Chromosomal replication initiator DnaA COGs: COG0593 ATPase involved in DNA replication initiation~InterPro IPR003593: IPR013317~KEGG: dhd:Dhaf_2996 chromosomal replication initiator DnaA domain protein~PFAM: Chromosomal replication control%2C initiator (DnaA)/regulator (Hda)~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: Bacterial dnaA protein gene gene2105 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2074 Sgly_2075 Sgly_2075 Sgly_2075 2091822 2093183 - L-glutamine synthetase COGs: COG0174 Glutamine synthetase~InterPro IPR004809: IPR008147: IPR008146~KEGG: hmo:HM1_2353 glutamine synthetase%2C type I~PFAM: Glutamine synthetase%2C catalytic domain%3B Glutamine synthetase%2C beta-Grasp~PRIAM: Glutamate--ammonia ligase~SPTR: Glutamine synthetase%3B~TIGRFAM: Glutamine synthetase type I~PFAM: Glutamine synthetase%2C catalytic domain%3B Glutamine synthetase%2C beta-Grasp domain~TIGRFAM: glutamine synthetase%2C type I gene gene2106 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2075 Sgly_2076 Sgly_2076 Sgly_2076 2093180 2093707 - hypothetical protein KEGG: dhd:Dhaf_3009 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2107 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2076 Sgly_2077 Sgly_2077 Sgly_2077 2093786 2095039 - Tetratricopeptide TPR_1 repeat-containing protein InterPro IPR019734: IPR001440~KEGG: dhd:Dhaf_3010 TPR repeat-containing protein~PFAM: Tetratricopeptide TPR-1~SPTR: Putative uncharacterized protein%3B~PFAM: Tetratricopeptide repeat gene gene2108 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2077 Sgly_2078 Sgly_2078 Sgly_2078 2095188 2095445 + hypothetical protein KEGG: dhd:Dhaf_3011 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2109 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2078 Sgly_2079 Sgly_2079 Sgly_2079 2095572 2096345 + polysaccharide deacetylase COGs: COG0726 xylanase/chitin deacetylase~InterPro IPR002509~KEGG: dhd:Dhaf_3012 polysaccharide deacetylase~PFAM: Polysaccharide deacetylase~SPTR: Putative uncharacterized protein%3B~PFAM: Polysaccharide deacetylase~TIGRFAM: polysaccharide deacetylase family sporulation protein PdaB gene gene2110 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2079 Sgly_2080 Sgly_2080 Sgly_2080 2096356 2097213 - Protein of unknown function DUF2179 COGs: COG1284 conserved hypothetical protein~InterPro IPR003740: IPR019264~KEGG: dhd:Dhaf_3014 protein of unknown function DUF161~PFAM: Protein of unknown function DUF2179%3B Protein of unknown function DUF161~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterized BCR%2C YitT family COG1284%3B Uncharacterized protein conserved in bacteria (DUF2179) gene gene2111 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2080 Sgly_2081 Sgly_2081 Sgly_2081 2098367 2099209 + RNA polymerase%2C sigma subunit%2C ECF family COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog~InterPro IPR014284: IPR007627~KEGG: ele:Elen_2074 RNA polymerase%2C sigma-24 subunit%2C ECF subfamily~PFAM: RNA polymerase sigma-70 region 2~SPTR: Putative uncharacterized protein%3B~TIGRFAM: RNA polymerase sigma-70~PFAM: Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family gene gene2113 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2081 Sgly_2082 Sgly_2082 Sgly_2082 2099221 2099901 + Conserved hypothetical protein CHP02453 COGs: COG5587 conserved hypothetical protein~InterPro IPR012808~KEGG: ele:Elen_2075 hypothetical protein~PFAM: Conserved hypothetical protein CHP02453~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Conserved hypothetical protein CHP02453~PFAM: Conserved hypothetical protein (DUF2461)~TIGRFAM: conserved hypothetical protein TIGR02453 gene gene2114 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2082 Sgly_2083 Sgly_2083 Sgly_2083 2099916 2100095 + pseudogene gene2115 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2083 Sgly_2084 Sgly_2084 Sgly_2084 2100144 2100992 + Peptidase M23 COGs: COG0739 Membrane protein related to metalloendopeptidase~InterPro IPR016047~KEGG: nth:Nther_0268 peptidase M23~PFAM: Peptidase M23~SPTR: Putative uncharacterized protein%3B~manually curated~PFAM: Peptidase family M23 gene gene2116 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2084 Sgly_2085 Sgly_2085 Sgly_2085 2101028 2101627 + hypothetical protein KEGG: pac:PPA0380 hyalorunate lyase~SPTR: Putative uncharacterized protein gene gene2117 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2085 Sgly_2086 Sgly_2086 Sgly_2086 2101821 2102351 - hypothetical protein KEGG: aoe:Clos_2225 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF2812) gene gene2118 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2086 Sgly_2087 Sgly_2087 Sgly_2087 2102332 2102673 - transcriptional regulator%2C PadR family InterPro IPR005149~KEGG: aoe:Clos_2226 PadR-like family transcriptional regulator~PFAM: Transcription regulator PadR N-terminal-like~SPTR: Transcriptional regulator%2C PadR-like family%3B~PFAM: Transcriptional regulator PadR-like family gene gene2119 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2087 Sgly_2088 Sgly_2088 Sgly_2088 2102914 2103147 - pseudogene gene2120 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2088 Sgly_2089 Sgly_2089 Sgly_2089 2103316 2103948 - Thymidylate kinase COGs: COG0125 Thymidylate kinase~HAMAP: Thymidylate kinase~InterPro IPR018094: IPR000062~KEGG: mxa:MXAN_3412 thymidylate kinase~PFAM: Thymidylate kinase-like~PRIAM: dTMP kinase~SPTR: Thymidylate kinase%3B~TIGRFAM: Thymidylate kinase~PFAM: Thymidylate kinase~TIGRFAM: thymidylate kinase gene gene2121 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2089 Sgly_2090 Sgly_2090 Sgly_2090 2104187 2104981 - response regulator receiver protein COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR012052: IPR001789: IPR014879~KEGG: dhd:Dhaf_3021 sporulation transcriptional activator Spo0A~PFAM: Sporulation initiation factor Spo0A%2C C-terminal%3B Signal transduction response regulator%2C receiver domain~SMART: Signal transduction response regulator%2C receiver domain~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Sporulation stage 0%2C transcription factor Spo0A~PFAM: Sporulation initiation factor Spo0A C terminal%3B Response regulator receiver domain~TIGRFAM: sporulation transcription factor Spo0A gene gene2122 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2090 Sgly_2091 Sgly_2091 Sgly_2091 2105363 2105551 - ferredoxin COGs: COG1141 Ferredoxin~KEGG: cac:CA_C3621 ferredoxin~SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein%3B~PFAM: Protein of unknown function (DUF1271) gene gene2123 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2091 Sgly_2092 Sgly_2092 Sgly_2092 2105610 2105732 - hypothetical protein gene gene2124 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2092 Sgly_2093 Sgly_2093 Sgly_2093 2106025 2106372 - hypothetical protein KEGG: dhd:Dhaf_3027 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2125 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2093 Sgly_2094 Sgly_2094 Sgly_2094 2106455 2106979 - CDP-diacylglycerol--serine O-phosphatidyltransferase COGs: COG1183 Phosphatidylserine synthase~InterPro IPR004533: IPR000462~KEGG: dhd:Dhaf_3028 CDP-diacylglycerol/serine O-phosphatidyltransferase~PFAM: CDP-alcohol phosphatidyltransferase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase~PFAM: CDP-alcohol phosphatidyltransferase~TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase gene gene2126 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2094 Sgly_2095 Sgly_2095 Sgly_2095 2107049 2109676 - helicase c2 COGs: COG1199 Rad3-related DNA helicase~InterPro IPR014001: IPR006554: IPR006555~KEGG: dhd:Dhaf_3029 DnaQ family exonuclease/DinG family helicase~SMART: Helicase%2C ATP-dependent%2C c2 type%3B DEAD-like helicase%2C N-terminal%3B Helicase-like%2C DEXD box c2 type~SPTR: Putative uncharacterized protein%3B~PFAM: DEAD_2%3B DEAD/DEAH box helicase~TIGRFAM: DnaQ family exonuclease/DinG family helicase%2C putative gene gene2127 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2095 Sgly_2096 Sgly_2096 Sgly_2096 2109860 2110177 + hypothetical protein KEGG: dhd:Dhaf_3033 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2128 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2096 Sgly_2097 Sgly_2097 Sgly_2097 2110207 2110512 - type III secretion exporter COGs: COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB~InterPro IPR006135~KEGG: dhd:Dhaf_3034 FlhB domain-containing protein~PFAM: Type III secretion exporter~SPTR: Putative uncharacterized protein%3B~PFAM: FlhB HrpN YscU SpaS Family~TIGRFAM: flhB C-terminus-related protein gene gene2129 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2097 Sgly_2098 Sgly_2098 Sgly_2098 2110496 2112226 - hypothetical protein KEGG: dhd:Dhaf_3035 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2130 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2098 Sgly_2099 Sgly_2099 Sgly_2099 2112237 2112380 - hypothetical protein gene gene2131 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2099 Sgly_2100 Sgly_2100 Sgly_2100 2112411 2112734 - thioredoxin COGs: COG3118 Thioredoxin domain-containing protein~InterPro IPR005746: IPR013766~KEGG: dsy:DSY2429 hypothetical protein~PFAM: Thioredoxin domain~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Thioredoxin~PFAM: Thioredoxin~TIGRFAM: thioredoxin gene gene2132 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2100 Sgly_2101 Sgly_2101 Sgly_2101 2112755 2113063 - protein of unknown function DUF156 COGs: COG1937 conserved hypothetical protein~InterPro IPR003735~KEGG: dhd:Dhaf_3585 protein of unknown function DUF156~PFAM: Protein of unknown function DUF156~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterised BCR%2C COG1937 gene gene2133 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2101 Sgly_2102 Sgly_2102 Sgly_2102 2113174 2114970 - aspartyl-tRNA synthetase COGs: COG0173 Aspartyl-tRNA synthetase~InterPro IPR004524: IPR004365: IPR004364: IPR004115~KEGG: dhd:Dhaf_3586 aspartyl-tRNA synthetase~PFAM: Aminoacyl-tRNA synthetase%2C class II (D/K/N)%3B Nucleic acid binding%2C OB-fold%2C tRNA/helicase-type%3B GAD domain~PRIAM: Aspartate--tRNA ligase~SPTR: Aspartyl-tRNA synthetase%3B~TIGRFAM: Aspartyl-tRNA synthetase%2C class IIb%2C bacterial/mitochondrial type~PFAM: GAD domain%3B tRNA synthetases class II (D%2C K and N)%3B OB-fold nucleic acid binding domain~TIGRFAM: aspartyl-tRNA synthetase%2C bacterial type gene gene2134 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2102 Sgly_2103 Sgly_2103 Sgly_2103 2115038 2116306 - histidyl-tRNA synthetase COGs: COG0124 Histidyl-tRNA synthetase~HAMAP: Histidyl-tRNA synthetase%2C class IIa%2C subgroup~InterPro IPR015807: IPR002314: IPR004154~KEGG: dhd:Dhaf_3587 histidyl-tRNA synthetase~PFAM: Aminoacyl-tRNA synthetase%2C class II (G/ H/ P/ S)%2C conserved domain%3B Anticodon-binding~PRIAM: Histidine--tRNA ligase~SPTR: Histidyl-tRNA synthetase%3B~TIGRFAM: Histidyl-tRNA synthetase%2C class IIa%2C subgroup~PFAM: Anticodon binding domain%3B tRNA synthetase class II core domain (G%2C H%2C P%2C S and T)~TIGRFAM: histidyl-tRNA synthetase gene gene2135 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2103 Sgly_2104 Sgly_2104 Sgly_2104 2116379 2117935 - Coproporphyrinogen dehydrogenase COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase~InterPro IPR006638: IPR007197~KEGG: dhd:Dhaf_3606 coproporphyrinogen III oxidase~PFAM: Radical SAM~PRIAM: Coproporphyrinogen dehydrogenase~SMART: Elongator protein 3/MiaB/NifB~SPTR: Putative uncharacterized protein%3B~PFAM: Radical SAM superfamily gene gene2136 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2104 Sgly_2105 Sgly_2105 Sgly_2105 2117925 2118566 - beta-lactamase domain protein COGs: COG0491 Zn-dependent hydrolase including glyoxylase~KEGG: dhd:Dhaf_3607 beta-lactamase domain protein~SPTR: Putative uncharacterized protein%3B~PFAM: Metallo-beta-lactamase superfamily gene gene2137 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2105 Sgly_2106 Sgly_2106 Sgly_2106 2118582 2119031 - D-tyrosyl-tRNA(Tyr) deacylase COGs: COG1490 D-Tyr-tRNAtyr deacylase~HAMAP: D-tyrosyl-tRNA(Tyr) deacylase~InterPro IPR003732~KEGG: tna:CTN_1854 D-tyrosyl-tRNA(Tyr) deacylase~PFAM: D-tyrosyl-tRNA(Tyr) deacylase~SPTR: D-tyrosyl-tRNA(Tyr) deacylase%3B~TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase~PFAM: D-Tyr-tRNA(Tyr) deacylase~TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase gene gene2138 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2106 Sgly_2107 Sgly_2107 Sgly_2107 2119047 2121203 - (p)ppGpp synthetase I%2C SpoT/RelA COGs: COG0317 Guanosine polyphosphate pyrophosphohydrolase/synthetase~InterPro IPR004811: IPR003607: IPR006674: IPR007685: IPR 004095~KEGG: dhd:Dhaf_3609 (p)ppGpp synthetase I%2C SpoT/RelA~PFAM: RelA/SpoT%3B Metal-dependent phosphohydrolase%2C HD subdomain%3B TGS~PRIAM: GTP diphosphokinase~SMART: Metal-dependent phosphohydrolase%2C HD domain~SPTR: Putative uncharacterized protein%3B~TIGRFAM: RelA/SpoT protein~PFAM: HD domain%3B TGS domain%3B Region found in RelA / SpoT proteins~TIGRFAM: (p)ppGpp synthetase%2C RelA/SpoT family gene gene2139 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2107 Sgly_2108 Sgly_2108 Sgly_2108 2121210 2123219 - single-stranded-DNA-specific exonuclease RecJ COGs: COG0608 Single-stranded DNA-specific exonuclease~InterPro IPR004610: IPR001667: IPR003156~KEGG: dhd:Dhaf_3611 single-stranded-DNA-specific exonuclease RecJ~PFAM: Phosphoesterase%2C RecJ-like%3B Phosphoesterase%2C DHHA1~SPTR: Single-stranded-DNA-specific exonuclease RecJ%3B~TIGRFAM: Bacterial RecJ exonuclease~PFAM: DHH family%3B DHHA1 domain~TIGRFAM: single-stranded-DNA-specific exonuclease RecJ gene gene2140 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2108 Sgly_2109 Sgly_2109 Sgly_2109 2123216 2123584 - hypothetical protein COGs: COG5416 Uncharacterized integral membrane protein~KEGG: dhd:Dhaf_4434 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1049)%3B Ctr copper transporter family gene gene2141 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2109 Sgly_2110 Sgly_2110 Sgly_2110 2123660 2124103 - hypothetical protein KEGG: dhd:Dhaf_3612 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2142 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2110 Sgly_2111 Sgly_2111 Sgly_2111 2124281 2124778 - acetolactate synthase%2C small subunit COGs: COG0440 Acetolactate synthase small (regulatory) subunit~InterPro IPR004789: IPR002912: IPR019455~KEGG: dhd:Dhaf_3616 acetolactate synthase 3 regulatory subunit~PFAM: Acetolactate synthase%2C small subunit%2C C-terminal%3B Amino acid-binding ACT~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Acetolactate synthase%2C small subunit~PFAM: ACT domain%3B Small subunit of acetolactate synthase~TIGRFAM: acetolactate synthase%2C small subunit gene gene2143 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2111 Sgly_2112 Sgly_2112 Sgly_2112 2124784 2126475 - acetolactate synthase%2C large subunit COGs: COG0028 Thiamine pyrophosphate-requiring protein~InterPro IPR012846: IPR012001: IPR012000: IPR011766~KEGG: dhd:Dhaf_3617 acetolactate synthase%2C large subunit%2C biosynthetic type~PFAM: Thiamine pyrophosphate enzyme%2C N-terminal TPP-binding domain%3B Thiamine pyrophosphate enzyme%2C central domain%3B Thiamine pyrophosphate enzyme%2C C-terminal TPP-binding~PRIAM: Acetolactate synthase~SPTR: Acetolactate synthase%3B~TIGRFAM: Acetolactate synthase%2C large subunit%2C biosynthetic~PFAM: Thiamine pyrophosphate enzyme%2C central domain%3B Thiamine pyrophosphate enzyme%2C N-terminal TPP binding domain%3B Thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain~TIGRFAM: acetolactate synthase%2C large subunit%2C biosynthetic type gene gene2144 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2112 Sgly_2113 Sgly_2113 Sgly_2113 2126615 2127352 - metallo-beta-lactamase superfamily protein COGs: COG1234 Metal-dependent hydrolase of the beta-lactamase superfamily III~KEGG: cno:NT01CX_0832 metallo-beta-lactamase superfamily protein~SPTR: YhfI%3B~PFAM: Metallo-beta-lactamase superfamily gene gene2145 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2113 Sgly_2114 Sgly_2114 Sgly_2114 2127518 2128510 - protein-export membrane protein SecF COGs: COG0341 Preprotein translocase subunit SecF~InterPro IPR005665: IPR003335~KEGG: dhd:Dhaf_3618 protein-export membrane protein SecD~PFAM: SecD/SecF/SecDF export membrane protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: SecF protein%3B SecD/SecF/SecDF export membrane protein~PFAM: Protein export membrane protein~TIGRFAM: protein-export membrane protein%2C SecD/SecF family%3B protein-export membrane protein SecF gene gene2146 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2114 Sgly_2115 Sgly_2115 Sgly_2115 2128512 2129759 - protein-export membrane protein SecD COGs: COG0342 Preprotein translocase subunit SecD~InterPro IPR005791: IPR003335~KEGG: dhd:Dhaf_3618 protein-export membrane protein SecD~PFAM: SecD/SecF/SecDF export membrane protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: SecD export membrane protein%3B SecD/SecF/SecDF export membrane protein~PFAM: Protein export membrane protein%3B SecD/SecF GG Motif~TIGRFAM: protein-export membrane protein SecD%3B protein-export membrane protein%2C SecD/SecF family gene gene2147 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2115 Sgly_2116 Sgly_2116 Sgly_2116 2129940 2130233 - preprotein translocase%2C YajC subunit COGs: COG1862 Preprotein translocase subunit YajC~InterPro IPR003849~KEGG: mta:Moth_1693 protein translocase subunit YajC~PFAM: YajC~SPTR: Protein translocase subunit yajC%3B~TIGRFAM: YajC~PFAM: Preprotein translocase subunit~TIGRFAM: preprotein translocase%2C YajC subunit gene gene2148 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2116 Sgly_2117 Sgly_2117 Sgly_2117 2130315 2131469 - tRNA-guanine transglycosylase COGs: COG0343 Queuine/archaeosine tRNA-ribosyltransferase~HAMAP: Queuine tRNA-ribosyltransferase~InterPro IPR004803: IPR002616~KEGG: dhd:Dhaf_3622 queuine tRNA-ribosyltransferase~PFAM: Queuine/other tRNA-ribosyltransferase~PRIAM: tRNA-guanine transglycosylase~SPTR: Queuine tRNA-ribosyltransferase%3B~TIGRFAM: Queuine tRNA-ribosyltransferase%3B Queuine/other tRNA-ribosyltransferase~PFAM: Queuine tRNA-ribosyltransferase~TIGRFAM: tRNA-guanine transglycosylases%2C various specificities%3B tRNA-guanine transglycosylase%2C queuosine-34-forming gene gene2149 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2117 Sgly_2118 Sgly_2118 Sgly_2118 2131517 2132539 - S-adenosylmethionine--tRNA ribosyltransferase-isomerase COGs: COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase)~HAMAP: Queuosine biosynthesis protein~InterPro IPR003699~KEGG: dhd:Dhaf_3623 S-adenosylmethionine:tRNA ribosyltransferase-isomerase~PFAM: Queuosine biosynthesis protein~SPTR: S-adenosylmethionine:tRNA ribosyltransferase-isomerase%3B~TIGRFAM: Queuosine biosynthesis protein~PFAM: Queuosine biosynthesis protein~TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase gene gene2150 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2118 Sgly_2119 Sgly_2119 Sgly_2119 2132582 2133952 - SpoIID/LytB domain protein COGs: COG2385 Sporulation protein and related protein~InterPro IPR013486: IPR013693~KEGG: dhd:Dhaf_3624 SpoIID/LytB domain protein~PFAM: Sporulation stage II protein D%2C amidase enhancer LytB N-terminal~SPTR: SpoIID/LytB domain protein%3B~TIGRFAM: Sporulation stage II protein D%2C amidase enhancer LytB~PFAM: Stage II sporulation protein~TIGRFAM: SpoIID/LytB domain gene gene2151 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2119 Sgly_2120 Sgly_2120 Sgly_2120 2134020 2135021 - Holliday junction DNA helicase subunit RuvB COGs: COG2255 Holliday junction resolvasome helicase subunit~HAMAP: DNA helicase%2C Holliday junction RuvB type~InterPro IPR004605: IPR003593: IPR008824: IPR003959: IPR 008823~KEGG: dhd:Dhaf_3625 Holliday junction DNA helicase RuvB~PFAM: DNA helicase%2C Holliday junction RuvB type%2C C-terminal%3B ATPase%2C AAA-type%2C core%3B DNA helicase%2C Holliday junction RuvB type%2C N-terminal~SMART: ATPase%2C AAA+ type%2C core~SPTR: Holliday junction ATP-dependent DNA helicase ruvB%3B~TIGRFAM: DNA helicase%2C Holliday junction RuvB type~PFAM: Holliday junction DNA helicase ruvB C-terminus%3B Holliday junction DNA helicase ruvB N-terminus~TIGRFAM: Holliday junction DNA helicase%2C RuvB subunit gene gene2152 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2120 Sgly_2121 Sgly_2121 Sgly_2121 2135043 2135645 - Holliday junction ATP-dependent DNA helicase ruvA COGs: COG0632 Holliday junction resolvasome DNA-binding subunit~HAMAP: Bacterial DNA recombination protein RuvA~InterPro IPR000085: IPR003583: IPR013849: IPR011114~KEGG: dsy:DSY2467 hypothetical protein~PFAM: DNA helicase%2C Holliday junction RuvA type%2C domain I%2C bacterial%3B DNA helicase%2C Holliday junction RuvA type%2C domain III%2C C-terminal~SMART: Helix-hairpin-helix DNA-binding motif%2C class 1~SPTR: Holliday junction ATP-dependent DNA helicase ruvA%3B~TIGRFAM: Bacterial DNA recombination protein RuvA~PFAM: RuvA%2C C-terminal domain%3B RuvA N terminal domain~TIGRFAM: Holliday junction DNA helicase%2C RuvA subunit gene gene2153 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2121 Sgly_2122 Sgly_2122 Sgly_2122 2135663 2136133 - Crossover junction endodeoxyribonuclease ruvC COGs: COG0817 Holliday junction resolvasome endonuclease subunit~HAMAP: Crossover junction endodeoxyribonuclease RuvC~InterPro IPR002176~KEGG: dhd:Dhaf_3627 Holliday junction resolvase~PFAM: Crossover junction endodeoxyribonuclease RuvC~PRIAM: Crossover junction endodeoxyribonuclease~SPTR: Crossover junction endodeoxyribonuclease ruvC%3B~TIGRFAM: Crossover junction endodeoxyribonuclease RuvC~PFAM: Crossover junction endodeoxyribonuclease RuvC~TIGRFAM: crossover junction endodeoxyribonuclease RuvC gene gene2154 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2122 Sgly_2123 Sgly_2123 Sgly_2123 2136172 2136927 - UPF0082 protein yeeN COGs: COG0217 conserved hypothetical protein~HAMAP: Protein of unknown function DUF28~InterPro IPR002876~KEGG: dhd:Dhaf_3629 hypothetical protein~PFAM: Protein of unknown function DUF28~SPTR: UPF0082 protein Dhaf_3629%3B~TIGRFAM: Protein of unknown function DUF28~PFAM: Domain of unknown function DUF28~TIGRFAM: DNA-binding regulatory protein%2C YebC/PmpR family gene gene2155 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2123 Sgly_2124 Sgly_2124 Sgly_2124 2137053 2139533 - (NiFe) hydrogenase maturation protein HypF COGs: COG0068 Hydrogenase maturation factor~InterPro IPR004421: IPR001792: IPR011125: IPR006070~KEGG: dhd:Dhaf_3636 (NiFe) hydrogenase maturation protein HypF~PFAM: Sua5/YciO/YrdC%2C N-terminal%3B Acylphosphatase-like%3B Zinc finger%2C HypF-type~SPTR: Hydrogenase maturation protein hypF%3B~TIGRFAM: Hydrogenase maturation factor%2C HypF-type~PFAM: HypF finger%3B yrdC domain%3B Acylphosphatase~TIGRFAM: [NiFe] hydrogenase maturation protein HypF gene gene2156 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2124 Sgly_2125 Sgly_2125 Sgly_2125 2139608 2140609 - filamentation induced by cAMP protein Fic COGs: COG3177 conserved hypothetical protein~InterPro IPR003812~KEGG: dde:Dde_2494 hypothetical protein~PFAM: Filamentation induced by cAMP/death on curing%2C related~SPTR: Fic family protein%3B~PFAM: Fic/DOC family gene gene2157 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2125 Sgly_2126 Sgly_2126 Sgly_2126 2141083 2142828 - Xenobiotic-transporting ATPase COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterPro IPR003593: IPR001140: IPR003439~KEGG: ckr:CKR_2160 hypothetical protein~PFAM: ABC transporter-like%3B ABC transporter%2C transmembrane domain~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ABC transporter%3B ABC transporter transmembrane region gene gene2158 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2126 Sgly_2127 Sgly_2127 Sgly_2127 2142821 2144587 - Xenobiotic-transporting ATPase COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterPro IPR003593: IPR001140: IPR003439~KEGG: ckr:CKR_2161 hypothetical protein~PFAM: ABC transporter-like%3B ABC transporter%2C transmembrane domain~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ABC transporter%3B ABC transporter transmembrane region gene gene2159 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2127 Sgly_2128 Sgly_2128 Sgly_2128 2144776 2146380 - extracellular solute-binding protein family 5 COGs: COG0747 ABC-type dipeptide transport system periplasmic component~InterPro IPR000914~KEGG: apr:Apre_0689 extracellular solute-binding protein family 5~PFAM: Bacterial extracellular solute-binding protein%2C family 5~SPTR: Putative uncharacterized protein%3B~PFAM: Bacterial extracellular solute-binding proteins%2C family 5 Middle~TIGRFAM: nickel ABC transporter%2C periplasmic nickel-binding protein gene gene2160 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2128 Sgly_2129 Sgly_2129 Sgly_2129 2146411 2147112 - Fe(3+)-transporting ATPase COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase~InterPro IPR003593: IPR003439~KEGG: apr:Apre_1770 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Fe(3+)-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ABC transporter gene gene2161 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2129 Sgly_2130 Sgly_2130 Sgly_2130 2147085 2147888 - Nickel-transporting ATPase COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: apr:Apre_1769 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Nickel-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ABC transporter gene gene2162 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2130 Sgly_2131 Sgly_2131 Sgly_2131 2147881 2148678 - binding-protein-dependent transport systems inner membrane component COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: apr:Apre_1768 binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Putative uncharacterized protein%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2163 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2131 Sgly_2132 Sgly_2132 Sgly_2132 2148675 2149631 - binding-protein-dependent transport systems inner membrane component COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: apr:Apre_1767 binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Putative uncharacterized protein%3B~manually curated~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2164 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2132 Sgly_2133 Sgly_2133 Sgly_2133 2149766 2150725 - transcriptional regulator%2C AraC family COGs: COG2207 AraC-type DNA-binding domain-containing protein~InterPro IPR018060: IPR000005~KEGG: cbh:CLC_2207 AraC family transcriptional regulator~PFAM: Helix-turn-helix%2C AraC type~SMART: Helix-turn-helix%2C AraC domain~SPTR: Putative uncharacterized protein%3B~manually curated~PFAM: Bacterial regulatory helix-turn-helix proteins%2C AraC family gene gene2165 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2133 Sgly_2134 Sgly_2134 Sgly_2134 2150795 2150959 - pseudogene gene2166 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2134 Sgly_2135 Sgly_2135 Sgly_2135 2151168 2152997 - DNA mismatch repair protein MutS domain protein COGs: COG0249 Mismatch repair ATPase (MutS family)~InterPro IPR007696: IPR000432~KEGG: cac:CA_C3563 mismatch repair protein MutS-like ATPase~PFAM: DNA mismatch repair protein MutS%2C C-terminal~SMART: DNA mismatch repair protein MutS%2C C-terminal%3B DNA mismatch repair protein MutS%2C core~SPTR: Mismatch repair protein MutS-like ATPase%3B~PFAM: MutS domain V%3B MutS domain III gene gene2167 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2135 Sgly_2136 Sgly_2136 Sgly_2136 2153387 2153899 + hypothetical protein KEGG: cth:Cthe_0359 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1113) gene gene2168 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2136 Sgly_2137 Sgly_2137 Sgly_2137 2154092 2154973 - transcriptional regulator%2C AraC family COGs: COG2207 AraC-type DNA-binding domain-containing protein~InterPro IPR018060: IPR000005~KEGG: gka:GK0170 AraC/XylS family transcriptional regulator~PFAM: Helix-turn-helix%2C AraC type~SMART: Helix-turn-helix%2C AraC domain~SPTR: Transcriptional regulator%2C AraC family%3B~PFAM: Bacterial regulatory helix-turn-helix proteins%2C AraC family gene gene2169 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2137 Sgly_2138 Sgly_2138 Sgly_2138 2155309 2155458 + hypothetical protein SPTR: Putative uncharacterized protein gene gene2170 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2138 Sgly_2139 Sgly_2139 Sgly_2139 2155659 2155823 - pseudogene gene2171 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2139 Sgly_2140 Sgly_2140 Sgly_2140 2155873 2156262 - hypothetical protein KEGG: ptm:GSPATT00037355001 hypothetical protein~SPTR: Chromosome undetermined scaffold_168%2C whole genome shotgun sequence gene gene2172 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2140 Sgly_2141 Sgly_2141 Sgly_2141 2156281 2158194 - RHS repeat-associated core domain protein InterPro IPR006530~KEGG: ccb:Clocel_0562 YD repeat-containing protein~PFAM: YD repeat~SPTR: YD repeat-containing protein%3B~TIGRFAM: RHS repeat-associated core domain%3B YD repeat~PFAM: RHS Repeat~TIGRFAM: RHS repeat-associated core domain%3B YD repeat (two copies) gene gene2173 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2141 Sgly_2142 Sgly_2142 Sgly_2142 2158433 2158987 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog~InterPro IPR014284: IPR013249~KEGG: ttm:Tthe_2290 RNA polymerase%2C sigma-24 subunit%2C ECF subfamily~PFAM: RNA polymerase sigma factor 70%2C region 4 type 2~SPTR: RNA polymerase%2C sigma-24 subunit%2C ECF subfamily%3B~TIGRFAM: RNA polymerase sigma-70~manually curated~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family gene gene2174 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2142 Sgly_2143 Sgly_2143 Sgly_2143 2158980 2159723 + hypothetical protein KEGG: ttm:Tthe_2291 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2175 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2143 Sgly_2144 Sgly_2144 Sgly_2144 2159999 2160439 + hypothetical protein KEGG: dae:Dtox_0397 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2176 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2144 Sgly_2145 Sgly_2145 Sgly_2145 2160436 2160903 + hypothetical protein KEGG: dae:Dtox_0397 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2177 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2145 Sgly_2146 Sgly_2146 Sgly_2146 2166766 2167755 - aliphatic sulfonates family ABC transporter%2C periplasmic ligand-binding protein COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components~InterPro IPR010067: IPR001638~KEGG: dhd:Dhaf_3641 aliphatic sulfonates family ABC transporter%2C periplsmic ligand-binding protein~PFAM: Extracellular solute-binding protein%2C family 3~SMART: Extracellular solute-binding protein%2C family 3~SPTR: Putative uncharacterized protein%3B~TIGRFAM: ABC transporter%2C substrate-binding protein%2C aliphatic sulphonates~PFAM: NMT1/THI5 like~TIGRFAM: ABC transporter%2C substrate-binding protein%2C aliphatic sulfonates family gene gene2183 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2146 Sgly_2147 Sgly_2147 Sgly_2147 2167924 2168688 - Taurine-transporting ATPase COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: dar:Daro_0079 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Taurine-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Taurine ABC transporter%2C ATP-binding protein%3B~PFAM: ABC transporter gene gene2184 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2147 Sgly_2148 Sgly_2148 Sgly_2148 2168673 2169467 - binding-protein-dependent transport systems inner membrane component COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component~InterPro IPR000515~KEGG: dhd:Dhaf_3643 binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Binding-protein-dependent transport systems inner membrane component%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2185 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2148 Sgly_2149 Sgly_2149 Sgly_2149 2169540 2170796 - glutamate-5-semialdehyde dehydrogenase COGs: COG0014 Gamma-glutamyl phosphate reductase~HAMAP: Glutamate-5-semialdehyde dehydrogenase~InterPro IPR000965: IPR012134: IPR015590~KEGG: dsy:DSY1387 gamma-glutamyl phosphate reductase~PFAM: Aldehyde dehydrogenase~PRIAM: Glutamate-5-semialdehyde dehydrogenase~SPTR: Gamma-glutamyl phosphate reductase%3B~TIGRFAM: Gamma-glutamyl phosphate reductase GPR~PFAM: Aldehyde dehydrogenase family~TIGRFAM: gamma-glutamyl phosphate reductase gene gene2186 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2149 Sgly_2150 Sgly_2150 Sgly_2150 2170866 2171981 - glutamate 5-kinase COGs: COG0263 Glutamate 5-kinase~HAMAP: Glutamate 5-kinase~InterPro IPR005715: IPR002478: IPR001048~KEGG: dhd:Dhaf_2501 glutamate 5-kinase~PFAM: Aspartate/glutamate/uridylate kinase%3B Pseudouridine synthase/archaeosine transglycosylase~SMART: Pseudouridine synthase/archaeosine transglycosylase~SPTR: Glutamate 5-kinase%3B~TIGRFAM: Glutamate 5-kinase%2C ProB-related~PFAM: Amino acid kinase family%3B PUA domain~TIGRFAM: glutamate 5-kinase%3B uncharacterized domain 2 gene gene2187 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2150 Sgly_2151 Sgly_2151 Sgly_2151 2171974 2172777 - pyrroline-5-carboxylate reductase COGs: COG0345 Pyrroline-5-carboxylate reductase~InterPro IPR000304: IPR004455~KEGG: dhd:Dhaf_2500 pyrroline-5-carboxylate reductase~PFAM: NADP oxidoreductase%2C coenzyme F420-dependent~PRIAM: Pyrroline-5-carboxylate reductase~SPTR: Pyrroline-5-carboxylate reductase%3B~TIGRFAM: Delta 1-pyrroline-5-carboxylate reductase~PFAM: NADP oxidoreductase coenzyme F420-dependent~TIGRFAM: pyrroline-5-carboxylate reductase gene gene2188 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2151 Sgly_2152 Sgly_2152 Sgly_2152 2172901 2173962 - 3-isopropylmalate dehydrogenase COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase~HAMAP: Isopropylmalate dehydrogenase~InterPro IPR004429: IPR001804~KEGG: dhd:Dhaf_2487 3-isopropylmalate dehydrogenase~PFAM: Isocitrate/isopropylmalate dehydrogenase~PRIAM: 3-isopropylmalate dehydrogenase~SPTR: 3-isopropylmalate dehydrogenase%3B~TIGRFAM: Isopropylmalate dehydrogenase~PFAM: Isocitrate/isopropylmalate dehydrogenase~TIGRFAM: 3-isopropylmalate dehydrogenase gene gene2189 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2152 Sgly_2153 Sgly_2153 Sgly_2153 2173955 2174443 - 3-isopropylmalate dehydratase%2C small subunit COGs: COG0066 3-isopropylmalate dehydratase small subunit~HAMAP: 3-isopropylmalate dehydratase small subunit~InterPro IPR011824: IPR011827: IPR000573~KEGG: dhd:Dhaf_2486 3-isopropylmalate dehydratase%2C small subunit~PFAM: Aconitase A/isopropylmalate dehydratase small subunit%2C swivel~PRIAM: (R)-2-methylmalate dehydratase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: 3-isopropylmalate dehydratase%2C small subunit%2C bacterial-like%3B 3-isopropylmalate dehydratase%2C small subunit%2C subgroup~PFAM: Aconitase C-terminal domain~TIGRFAM: 3-isopropylmalate dehydratase%2C small subunit gene gene2190 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2153 Sgly_2154 Sgly_2154 Sgly_2154 2174436 2175710 - 3-isopropylmalate dehydratase%2C large subunit COGs: COG0065 3-isopropylmalate dehydratase large subunit~HAMAP: Homoaconitase/3-isopropylmalate dehydratase%2C large subunit%2C prokaryotic~InterPro IPR011823: IPR011826: IPR006251: IPR001030~KEGG: dhd:Dhaf_2485 3-isopropylmalate dehydratase large subunit~PFAM: Aconitase/3-isopropylmalate dehydratase large subunit%2C alpha/beta/alpha~SPTR: 3-isopropylmalate dehydratase large subunit%3B~TIGRFAM: 3-isopropylmalate dehydratase%2C large subunit%2C prokaryotic%3B Homoaconitase/3-isopropylmalate dehydratase%2C large subunit%2C prokaryotic%3B Homoaconitase/3-isopropylmalate dehydratase%2C large subunit%2C subgroup~PFAM: Aconitase family (aconitate hydratase)~TIGRFAM: 3-isopropylmalate dehydratase%2C large subunit%3B homoaconitate hydratase family protein gene gene2191 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2154 Sgly_2155 Sgly_2155 Sgly_2155 2175840 2177372 - 2-isopropylmalate synthase COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase~InterPro IPR005671: IPR000891: IPR013709~KEGG: drm:Dred_0285 2-isopropylmalate synthase~PFAM: Pyruvate carboxyltransferase%3B 2-isopropylmalate synthase LeuA%2C allosteric (dimerisation) domain~PRIAM: 2-isopropylmalate synthase~SPTR: 2-isopropylmalate synthase%3B~TIGRFAM: Bacterial 2-isopropylmalate synthase~PFAM: HMGL-like%3B LeuA allosteric (dimerisation) domain~TIGRFAM: 2-isopropylmalate synthase%2C bacterial type gene gene2192 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2155 Sgly_2156 Sgly_2156 Sgly_2156 2177441 2178439 - ketol-acid reductoisomerase COGs: COG0059 Ketol-acid reductoisomerase~HAMAP: Ketol-acid reductoisomerase~InterPro IPR013023: IPR013116: IPR000506~KEGG: dhd:Dhaf_2484 ketol-acid reductoisomerase~PFAM: Acetohydroxy acid isomeroreductase%2C catalytic%3B Acetohydroxy acid isomeroreductase C-terminal~PRIAM: Ketol-acid reductoisomerase~SPTR: Ketol-acid reductoisomerase%3B~TIGRFAM: Acetohydroxy acid isomeroreductase~PFAM: Acetohydroxy acid isomeroreductase%2C catalytic domain~TIGRFAM: ketol-acid reductoisomerase gene gene2193 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2156 Sgly_2157 Sgly_2157 Sgly_2157 2178488 2178967 - acetolactate synthase%2C small subunit COGs: COG0440 Acetolactate synthase small (regulatory) subunit~InterPro IPR004789: IPR002912: IPR019455~KEGG: dhd:Dhaf_2483 acetolactate synthase%2C small subunit~PFAM: Acetolactate synthase%2C small subunit%2C C-terminal%3B Amino acid-binding ACT~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Acetolactate synthase%2C small subunit~PFAM: ACT domain%3B Small subunit of acetolactate synthase~TIGRFAM: acetolactate synthase%2C small subunit gene gene2194 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2157 Sgly_2158 Sgly_2158 Sgly_2158 2178973 2180715 - acetolactate synthase%2C large subunit COGs: COG0028 Thiamine pyrophosphate-requiring protein~InterPro IPR012846: IPR012001: IPR012000: IPR011766~KEGG: dhd:Dhaf_2482 acetolactate synthase%2C large subunit%2C biosynthetic type~PFAM: Thiamine pyrophosphate enzyme%2C N-terminal TPP-binding domain%3B Thiamine pyrophosphate enzyme%2C central domain%3B Thiamine pyrophosphate enzyme%2C C-terminal TPP-binding~PRIAM: Acetolactate synthase~SPTR: Acetolactate synthase%3B~TIGRFAM: Acetolactate synthase%2C large subunit%2C biosynthetic~PFAM: Thiamine pyrophosphate enzyme%2C central domain%3B Thiamine pyrophosphate enzyme%2C N-terminal TPP binding domain%3B Thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain~TIGRFAM: acetolactate synthase%2C large subunit%2C biosynthetic type gene gene2195 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2158 Sgly_2159 Sgly_2159 Sgly_2159 2180718 2182415 - dihydroxyacid dehydratase COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase~HAMAP: Dihydroxy-acid dehydratase~InterPro IPR004404: IPR000581~KEGG: dhd:Dhaf_2481 dihydroxy-acid dehydratase~PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase~PRIAM: Dihydroxy-acid dehydratase~SPTR: Dihydroxy-acid dehydratase%3B~TIGRFAM: Dihydroxy-acid dehydratase~PFAM: Dehydratase family~TIGRFAM: dihydroxy-acid dehydratase gene gene2196 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2159 Sgly_2160 Sgly_2160 Sgly_2160 2182429 2183301 - branched chain amino acid aminotransferase apoenzyme COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase~InterPro IPR005785: IPR001544~KEGG: pth:PTH_0525 branched-chain amino acid aminotransferase~PFAM: Aminotransferase%2C class IV~PRIAM: D-amino-acid transaminase~SPTR: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase%3B~TIGRFAM: Branched-chain amino acid aminotransferase I~PFAM: Aminotransferase class IV~TIGRFAM: D-amino acid aminotransferase%3B branched-chain amino acid aminotransferase%2C group I gene gene2197 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2160 Sgly_2161 Sgly_2161 Sgly_2161 2183611 2184915 + homoserine dehydrogenase COGs: COG0460 Homoserine dehydrogenase~InterPro IPR005106: IPR001342: IPR002912~KEGG: dhd:Dhaf_2479 homoserine dehydrogenase~PFAM: Homoserine dehydrogenase%2C catalytic%3B Aspartate/homoserine dehydrogenase%2C NAD-binding%3B Amino acid-binding ACT~SPTR: Homoserine dehydrogenase%3B~PFAM: Homoserine dehydrogenase%2C NAD binding domain%3B Homoserine dehydrogenase%3B ACT domain gene gene2198 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2161 Sgly_2162 Sgly_2162 Sgly_2162 2185017 2185922 + homoserine kinase COGs: COG0083 Homoserine kinase~HAMAP: Homoserine kinase~InterPro IPR000870: IPR006204: IPR013750~KEGG: dhd:Dhaf_2478 homoserine kinase~PFAM: GHMP kinase%3B GHMP kinase%2C C-terminal~SPTR: Homoserine kinase%3B~TIGRFAM: Homoserine kinase~PFAM: GHMP kinases C terminal%3B GHMP kinases N terminal domain~TIGRFAM: homoserine kinase gene gene2199 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2162 Sgly_2163 Sgly_2163 Sgly_2163 2185924 2186493 - Lytic transglycosylase catalytic COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains)~InterPro IPR008258~KEGG: dhd:Dhaf_2473 lytic transglycosylase catalytic~PFAM: Lytic transglycosylase-like%2C catalytic~SPTR: Putative uncharacterized protein%3B~PFAM: Transglycosylase SLT domain gene gene2200 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2163 Sgly_2164 Sgly_2164 Sgly_2164 2186731 2187321 - Dephospho-CoA kinase COGs: COG0237 Dephospho-CoA kinase~HAMAP: Dephospho-CoA kinase~InterPro IPR001977~KEGG: dtu:Dtur_0883 dephospho-CoA kinase~PFAM: Dephospho-CoA kinase~PRIAM: Dephospho-CoA kinase~SPTR: Dephospho-CoA kinase%3B~TIGRFAM: Dephospho-CoA kinase~PFAM: Dephospho-CoA kinase~TIGRFAM: dephospho-CoA kinase gene gene2201 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2164 Sgly_2165 Sgly_2165 Sgly_2165 2187333 2188019 - sporulation protein YtaF COGs: COG1971 membrane protein~InterPro IPR014205: IPR003810~KEGG: dhd:Dhaf_2471 sporulation protein YtaF~PFAM: Protein of unknown function DUF204~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Sporulation protein YtaF~PFAM: Domain of unknown function DUF~TIGRFAM: putative sporulation protein YtaF gene gene2202 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2165 Sgly_2166 Sgly_2166 Sgly_2166 2188071 2189951 - ABC transporter related protein COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains~InterPro IPR003593: IPR003439~KEGG: dhd:Dhaf_2470 ABC transporter related~PFAM: ABC transporter-like~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ABC transporter gene gene2203 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2166 Sgly_2167 Sgly_2167 Sgly_2167 2189973 2190794 - DNA-(apurinic or apyrimidinic site) lyase%3B Formamidopyrimidine-DNA glycosylase COGs: COG0266 Formamidopyrimidine-DNA glycosylase~HAMAP: Formamidopyrimidine-DNA glycosylase~InterPro IPR000191: IPR020629: IPR012319: IPR015886~KEGG: dhd:Dhaf_2469 formamidopyrimidine-DNA glycosylase~PFAM: DNA glycosylase/AP lyase%2C catalytic domain%3B DNA glycosylase/AP lyase%2C H2TH DNA-binding~PRIAM: DNA-formamidopyrimidine glycosylase~SPTR: Formamidopyrimidine-DNA glycosylase%3B~TIGRFAM: DNA glycosylase/AP lyase~PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain%3B Formamidopyrimidine-DNA glycosylase N-terminal domain%3B Zinc finger found in FPG and IleRS~TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg) gene gene2204 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2167 Sgly_2168 Sgly_2168 Sgly_2168 2190890 2193607 - DNA polymerase I COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains~InterPro IPR018320: IPR002421: IPR008918: IPR001098: IPR 020046: IPR020047~KEGG: dsy:DSY1340 hypothetical protein~PFAM: DNA-directed DNA polymerase%2C family A%2C palm domain%3B 5'-3' exonuclease%2C N-terminal resolvase-like domain%3B 5'-3' exonuclease%2C SAM-fold domain~SMART: 5'-3' exonuclease%2C N-terminal%3B Helix-hairpin-helix motif%2C class 2%3B DNA-directed DNA polymerase%2C family A%2C palm domain~SPTR: Putative uncharacterized protein%3B~TIGRFAM: DNA polymerase 1~PFAM: 5'-3' exonuclease%2C C-terminal SAM fold%3B 5'-3' exonuclease%2C N-terminal resolvase-like domain%3B DNA polymerase family A~TIGRFAM: DNA polymerase I gene gene2205 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2168 Sgly_2169 Sgly_2169 Sgly_2169 2193795 2193929 + hypothetical protein gene gene2206 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2169 Sgly_2170 Sgly_2170 Sgly_2170 2194469 2195623 + 2-isopropylmalate synthase COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase~InterPro IPR000891~KEGG: dae:Dtox_2011 pyruvate carboxyltransferase~PFAM: Pyruvate carboxyltransferase~PRIAM: 2-isopropylmalate synthase~SPTR: Pyruvate carboxyltransferase%3B~PFAM: HMGL-like gene gene2207 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2170 Sgly_2171 Sgly_2171 Sgly_2171 2195691 2196323 - protein of unknown function UPF0029 COGs: COG1739 conserved hypothetical protein~InterPro IPR015796: IPR001498: IPR015269~KEGG: dhd:Dhaf_3065 protein of unknown function UPF0029~PFAM: Uncharacterised protein family UPF0029%2C Impact%2C N-terminal%3B Uncharacterised protein family UPF0029%2C Impact%2C C-terminal~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Uncharacterised protein family UPF0029%2C Impact~PFAM: Uncharacterized protein family UPF0029%3B Domain of unknown function (DUF1949)~TIGRFAM: uncharacterized protein%2C YigZ family gene gene2208 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2171 Sgly_2172 Sgly_2172 Sgly_2172 2196412 2196789 - Thioesterase superfamily COGs: COG5496 thioesterase~InterPro IPR006683~KEGG: dhd:Dhaf_3066 thioesterase superfamily protein~PFAM: Thioesterase superfamily~SPTR: Putative uncharacterized protein%3B~PFAM: Thioesterase superfamily gene gene2209 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2172 Sgly_2173 Sgly_2173 Sgly_2173 2196921 2197883 - Auxin Efflux Carrier COGs: COG0679 permease~InterPro IPR004776~KEGG: amt:Amet_3396 auxin efflux carrier~PFAM: Auxin efflux carrier~SPTR: Auxin Efflux Carrier%3B~PFAM: Membrane transport protein gene gene2210 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2173 Sgly_2174 Sgly_2174 Sgly_2174 2198119 2198538 - CBS domain containing protein COGs: COG0517 FOG: CBS domain~InterPro IPR000644~KEGG: cac:CA_C0678 CBS domain-containing protein~PFAM: Cystathionine beta-synthase%2C core~SMART: Cystathionine beta-synthase%2C core~SPTR: CBS domains%3B~PFAM: CBS domain gene gene2211 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2174 Sgly_2175 Sgly_2175 Sgly_2175 2198891 2200156 + ammonium transporter COGs: COG0004 Ammonia permease~InterPro IPR001905~KEGG: tjr:TherJR_0702 ammonium transporter~PFAM: Ammonium transporter~SPTR: Ammonium transporter%3B~TIGRFAM: Ammonium transporter~PFAM: Ammonium Transporter Family~TIGRFAM: ammonium transporter%3B (TC 1.A.11 gene gene2212 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2175 Sgly_2176 Sgly_2176 Sgly_2176 2200281 2201666 - PhoH family protein COGs: COG1875 ATPase related to phosphate starvation-inducible protein PhoH~InterPro IPR006596: IPR003714~KEGG: cth:Cthe_1304 PhoH-like protein~PFAM: PhoH-like protein~SMART: Nucleotide binding protein%2C PINc~SPTR: PhoH-like protein%3B~PFAM: PhoH-like protein gene gene2213 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2176 Sgly_2177 Sgly_2177 Sgly_2177 2201808 2202524 - demethylmenaquinone methyltransferase COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis~HAMAP: UbiE/COQ5 methyltransferase~InterPro IPR004033~KEGG: dsy:DSY1907 ubiquinone/menaquinone biosynthesis methlytransferase~PFAM: UbiE/COQ5 methyltransferase~SPTR: Menaquinone biosynthesis methyltransferase ubiE%3B~TIGRFAM: UbiE/COQ5 methyltransferase~PFAM: ubiE/COQ5 methyltransferase family~TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases gene gene2214 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2177 Sgly_2178 Sgly_2178 Sgly_2178 2202705 2202977 + Late competence development protein ComFB InterPro IPR019657~KEGG: dhd:Dhaf_3069 putative ComF operon protein~PFAM: Late competence development protein ComFB~SPTR: Putative uncharacterized protein%3B~PFAM: Late competence development protein ComFB gene gene2215 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2178 Sgly_2179 Sgly_2179 Sgly_2179 2203178 2205427 + DEAD/DEAH box helicase domain protein COGs: COG4581 Superfamily II RNA helicase~InterPro IPR014001: IPR001650: IPR011545: IPR012961~KEGG: dhd:Dhaf_3073 DEAD/DEAH box helicase domain protein~PFAM: DNA/RNA helicase%2C DEAD/DEAH box type%2C N-terminal%3B DNA/RNA helicase%2C C-terminal%3B DSH%2C C-terminal~SMART: DEAD-like helicase%2C N-terminal%3B DNA/RNA helicase%2C C-terminal~SPTR: DEAD/DEAH box helicase domain protein%3B~PFAM: DEAD/DEAH box helicase%3B DSHCT (NUC185) domain gene gene2216 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2179 Sgly_2180 Sgly_2180 Sgly_2180 2205717 2206673 - hypothetical protein KEGG: dae:Dtox_2026 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2217 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2180 Sgly_2181 Sgly_2181 Sgly_2181 2207014 2207430 + Penicillinase repressor InterPro IPR005650~KEGG: pjd:Pjdr2_5602 transcriptional repressor%2C CopY family~PFAM: Penicillinase repressor~SPTR: Putative uncharacterized protein%3B~PFAM: Penicillinase repressor gene gene2218 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2181 Sgly_2182 Sgly_2182 Sgly_2182 2207436 2208629 + peptidase M56 BlaR1 COGs: COG4219 Antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component~InterPro IPR008756~KEGG: toc:Toce_0330 peptidase M56 BlaR1~PFAM: Peptidase M56%2C BlaR1~SPTR: Putative uncharacterized protein%3B~PFAM: BlaR1 peptidase M56 gene gene2219 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2182 Sgly_2183 Sgly_2183 Sgly_2183 2208842 2210023 - Polysulphide reductase NrfD COGs: COG5557 Polysulphide reductase~InterPro IPR005614~KEGG: dhd:Dhaf_4619 polysulphide reductase NrfD~PFAM: Polysulphide reductase%2C NrfD~SPTR: Polysulphide reductase NrfD%3B~PFAM: Polysulphide reductase%2C NrfD gene gene2220 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2183 Sgly_2184 Sgly_2184 Sgly_2184 2210050 2210856 - 4Fe-4S ferredoxin iron-sulfur binding domain protein COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1~KEGG: dhd:Dhaf_4620 4Fe-4S ferredoxin iron-sulfur binding domain protein~SPTR: Putative hydrogenase iron-sulfur subunit%3B~PFAM: 4Fe-4S binding domain gene gene2221 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2184 Sgly_2185 Sgly_2185 Sgly_2185 2210879 2212444 - hydrogenase%2C Fe-only COGs: COG4624 Iron only hydrogenase large subunit C-terminal domain~InterPro IPR006311: IPR013352: IPR004108: IPR003149~KEGG: dhd:Dhaf_4621 hydrogenase%2C Fe-only~PFAM: Iron hydrogenase%2C large subunit%2C C-terminal%3B Iron hydrogenase%2C small subunit-like~PRIAM: Ferredoxin hydrogenase~SPTR: Hydrogenase%2C Fe-only%3B~TIGRFAM: Iron hydrogenase%2C subset%3B Twin-arginine translocation pathway%2C signal sequence~PFAM: Iron only hydrogenase large subunit%2C C-terminal domain%3B Iron hydrogenase small subunit~TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence%3B hydrogenases%2C Fe-only gene gene2222 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2185 Sgly_2186 Sgly_2186 Sgly_2186 2212780 2213961 - Polysulphide reductase NrfD COGs: COG5557 Polysulphide reductase~InterPro IPR005614~KEGG: dhd:Dhaf_4619 polysulphide reductase NrfD~PFAM: Polysulphide reductase%2C NrfD~SPTR: Polysulphide reductase NrfD%3B~PFAM: Polysulphide reductase%2C NrfD gene gene2223 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2186 Sgly_2187 Sgly_2187 Sgly_2187 2213988 2214794 - 4Fe-4S ferredoxin iron-sulfur binding domain protein COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1~KEGG: dhd:Dhaf_4620 4Fe-4S ferredoxin iron-sulfur binding domain protein~SPTR: Putative hydrogenase iron-sulfur subunit%3B~PFAM: 4Fe-4S binding domain gene gene2224 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2187 Sgly_2188 Sgly_2188 Sgly_2188 2214814 2216391 - hydrogenase%2C Fe-only COGs: COG4624 Iron only hydrogenase large subunit C-terminal domain~InterPro IPR006311: IPR013352: IPR004108: IPR003149~KEGG: dsy:DSY4712 putative hydrogenase large subunit~PFAM: Iron hydrogenase%2C large subunit%2C C-terminal%3B Iron hydrogenase%2C small subunit-like~PRIAM: Ferredoxin hydrogenase~SPTR: Putative hydrogenase large subunit%3B~TIGRFAM: Iron hydrogenase%2C subset%3B Twin-arginine translocation pathway%2C signal sequence~PFAM: Iron only hydrogenase large subunit%2C C-terminal domain%3B Iron hydrogenase small subunit~TIGRFAM: hydrogenases%2C Fe-only gene gene2225 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2188 Sgly_2189 Sgly_2189 Sgly_2189 2216809 2217036 - hypothetical protein KEGG: phu:Phum_PHUM548930 equilibrative nucleoside transporter%2C putative gene gene2226 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2189 Sgly_2190 Sgly_2190 Sgly_2190 2217453 2218718 - Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) COGs: COG0281 Malic enzyme~InterPro IPR012301: IPR012302~KEGG: dhd:Dhaf_3085 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))~PFAM: Malic enzyme%2C NAD-binding%3B Malic enzyme%2C N-terminal~PRIAM: Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))~SPTR: Putative uncharacterized protein%3B~PFAM: Malic enzyme%2C NAD binding domain%3B Malic enzyme%2C N-terminal domain gene gene2227 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2190 Sgly_2191 Sgly_2191 Sgly_2191 2218925 2219824 - Citryl-CoA lyase COGs: COG2301 Citrate lyase beta subunit~InterPro IPR005000~KEGG: dhd:Dhaf_3086 citryl-CoA lyase~PFAM: HpcH/HpaI aldolase~PRIAM: Citryl-CoA lyase~SPTR: Putative uncharacterized protein%3B~PFAM: HpcH/HpaI aldolase/citrate lyase family gene gene2228 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2191 Sgly_2192 Sgly_2192 Sgly_2192 2219919 2220812 - Succinate--CoA ligase (ADP-forming) COGs: COG0074 Succinyl-CoA synthetase alpha subunit~InterPro IPR003781: IPR005811~KEGG: dhd:Dhaf_3087 CoA-binding domain protein~PFAM: CoA-binding%3B ATP-citrate lyase/succinyl-CoA ligase~PRIAM: Succinate--CoA ligase (ADP-forming)~SPTR: Putative uncharacterized protein%3B~PFAM: CoA binding domain%3B CoA-ligase~TIGRFAM: succinyl-CoA synthetase%2C alpha subunit gene gene2229 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2192 Sgly_2193 Sgly_2193 Sgly_2193 2220845 2221135 - hypothetical protein KEGG: dhd:Dhaf_3088 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2230 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2193 Sgly_2194 Sgly_2194 Sgly_2194 2221144 2222418 - succinyl-CoA synthetase (ADP-forming) beta subunit COGs: COG0045 Succinyl-CoA synthetase beta subunit~InterPro IPR013650~KEGG: dhd:Dhaf_3089 succinate--CoA ligase (ADP-forming)~PFAM: ATP-grasp fold%2C succinyl-CoA synthetase-type~PRIAM: Succinate--CoA ligase (ADP-forming)~SPTR: Putative uncharacterized protein%3B~PFAM: ATP-grasp domain~TIGRFAM: succinyl-CoA synthetase%2C beta subunit gene gene2231 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2194 Sgly_2195 Sgly_2195 Sgly_2195 2222663 2223109 - RNase HI COGs: COG0328 Ribonuclease HI~HAMAP: Ribonuclease H~InterPro IPR002156~KEGG: mta:Moth_0619 ribonuclease H~PFAM: Ribonuclease H~PRIAM: Ribonuclease H~SPTR: Ribonuclease H%3B~PFAM: RNase H gene gene2232 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2195 Sgly_2196 Sgly_2196 Sgly_2196 2223172 2223630 - N-acetylglutamate synthase COGs: COG1246 N-acetylglutamate synthase and related acetyltransferase~InterPro IPR000182~KEGG: tjr:TherJR_2288 GCN5-related N-acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: GCN5-related N-acetyltransferase%3B~PFAM: Acetyltransferase (GNAT) family gene gene2233 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2196 Sgly_2197 Sgly_2197 Sgly_2197 2223775 2224974 - hypothetical protein KEGG: dhd:Dhaf_3093 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2234 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2197 Sgly_2198 Sgly_2198 Sgly_2198 2225157 2225813 - phosphate uptake regulator%2C PhoU COGs: COG0704 Phosphate uptake regulator~InterPro IPR008170~KEGG: dsy:DSY4120 hypothetical protein~PFAM: PhoU~SPTR: Putative uncharacterized protein%3B~TIGRFAM: PhoU~PFAM: PhoU domain~TIGRFAM: phosphate transport system regulatory protein PhoU gene gene2235 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2198 Sgly_2199 Sgly_2199 Sgly_2199 2225847 2226539 - type IV pilus assembly PilZ InterPro IPR009875~KEGG: aoe:Clos_2256 type IV pilus assembly PilZ~PFAM: Type IV pilus assembly PilZ~SPTR: Type IV pilus assembly PilZ%3B~PFAM: PilZ domain gene gene2236 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2199 Sgly_2200 Sgly_2200 Sgly_2200 2226736 2227230 + hypothetical protein KEGG: dhd:Dhaf_3096 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: HD domain gene gene2237 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2200 Sgly_2201 Sgly_2201 Sgly_2201 2227327 2229288 - acetyl-coenzyme A synthetase COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase~InterPro IPR000873: IPR011904~KEGG: dhd:Dhaf_0467 acetate/CoA ligase~PFAM: AMP-dependent synthetase/ligase~PRIAM: Acetate--CoA ligase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Acetate--CoA ligase~PFAM: Domain of unknown function (DUF3448)%3B AMP-binding enzyme~TIGRFAM: acetate--CoA ligase gene gene2238 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2201 Sgly_2202 Sgly_2202 Sgly_2202 2229704 2229949 - hypothetical protein KEGG: drm:Dred_1912 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2239 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2202 Sgly_2203 Sgly_2203 Sgly_2203 2229976 2231175 - LL-diaminopimelate aminotransferase apoenzyme COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase~InterPro IPR004839~KEGG: dhd:Dhaf_3098 aminotransferase class I and II~PFAM: Aminotransferase%2C class I/II~PRIAM: LL-diaminopimelate aminotransferase~SPTR: Aminotransferase class I and II%3B~PFAM: Aminotransferase class I and II gene gene2240 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2203 Sgly_2204 Sgly_2204 Sgly_2204 2231191 2232045 - PHP domain protein COGs: COG0613 metal-dependent phosphoesterase (PHP family)~InterPro IPR004013: IPR003141~KEGG: dsy:DSY1936 hypothetical protein~PFAM: PHP%2C C-terminal~SMART: Polymerase/histidinol phosphatase%2C N-terminal~SPTR: Putative uncharacterized protein%3B~PFAM: PHP domain gene gene2241 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2204 Sgly_2205 Sgly_2205 Sgly_2205 2232082 2233035 - dipeptidase COGs: COG2355 Zn-dependent dipeptidase microsomal dipeptidase homolog~InterPro IPR008257~KEGG: dhd:Dhaf_3100 membrane dipeptidase~PFAM: Peptidase M19%2C renal dipeptidase~PRIAM: Membrane dipeptidase~SPTR: Membrane dipeptidase%3B~PFAM: Membrane dipeptidase (Peptidase family M19) gene gene2242 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2205 Sgly_2206 Sgly_2206 Sgly_2206 2233121 2233381 - Stage V sporulation protein S COGs: COG2359 conserved hypothetical protein~InterPro IPR007347~KEGG: dhd:Dhaf_3101 stage V sporulation protein S~PFAM: Stage V sporulation protein S~SPTR: Putative uncharacterized protein%3B~PFAM: Stage V sporulation protein S (SpoVS) gene gene2243 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2206 Sgly_2207 Sgly_2207 Sgly_2207 2233516 2234319 - Conserved hypothetical protein CHP00282 COGs: COG1692 conserved hypothetical protein~InterPro IPR004843: IPR005235~KEGG: dsy:DSY1939 hypothetical protein~PFAM: Metallophosphoesterase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Conserved hypothetical protein CHP00282~TIGRFAM: metallophosphoesterase%2C MG_246/BB_0505 family gene gene2244 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2207 Sgly_2208 Sgly_2208 Sgly_2208 2234319 2234831 - hypothetical protein KEGG: dhd:Dhaf_3103 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2245 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2208 Sgly_2209 Sgly_2209 Sgly_2209 2235018 2236565 - metal dependent phosphohydrolase COGs: COG1418 HD superfamily hydrolase~HAMAP: 2%2C3-cyclic-nucleotide 2-phosphodiesterase~InterPro IPR018111: IPR006674: IPR004087: IPR003607: IPR 017705: IPR006675~KEGG: dhd:Dhaf_3104 phosphodiesterase~PFAM: Metal-dependent phosphohydrolase%2C HD subdomain%3B K Homology%2C type 1%2C subgroup~SMART: Metal-dependent phosphohydrolase%2C HD domain%3B K Homology~SPTR: RNA binding metal dependent phosphohydrolase%3B~TIGRFAM: 2%2C3-cyclic-nucleotide 2-phosphodiesterase%3B HDIG~PFAM: KH domain%3B HD domain%3B Domain of unknown function (DUF3552)~TIGRFAM: conserved hypothetical protein YmdA/YtgF%3B uncharacterized domain HDIG gene gene2246 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2209 Sgly_2210 Sgly_2210 Sgly_2210 2236885 2237358 - Regulatory protein recX COGs: COG2137 conserved hypothetical protein~HAMAP: Regulatory protein recX~InterPro IPR003783~KEGG: dsy:DSY1942 hypothetical protein~PFAM: Regulatory protein RecX~SPTR: Putative uncharacterized protein%3B~PFAM: RecX family gene gene2247 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2210 Sgly_2211 Sgly_2211 Sgly_2211 2237373 2238419 - RecA protein COGs: COG0468 RecA/RadA recombinase~HAMAP: DNA recombination and repair protein RecA~InterPro IPR013765: IPR003593~KEGG: dhd:Dhaf_3106 RecA protein~PFAM: DNA recombination and repair protein RecA~SMART: ATPase%2C AAA+ type%2C core~SPTR: Protein recA%3B~TIGRFAM: DNA recombination and repair protein RecA~PFAM: recA bacterial DNA recombination protein~TIGRFAM: protein RecA gene gene2248 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2211 Sgly_2212 Sgly_2212 Sgly_2212 2238549 2239784 - competence/damage-inducible protein cinA COGs: COG1058 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA~InterPro IPR001453: IPR008136: IPR008135~KEGG: dhd:Dhaf_3119 competence/damage-inducible protein CinA~PFAM: CinA%2C C-terminal%3B Molybdopterin binding~SPTR: Competence/damage-inducible protein CinA%3B~TIGRFAM: Competence-induced protein CinA%3B CinA%2C C-terminal~PFAM: Probable molybdopterin binding domain%3B Competence-damaged protein~TIGRFAM: competence/damage-inducible protein CinA N-terminal domain%3B competence/damage-inducible protein CinA C-terminal domain%3B molybdenum cofactor synthesis domain gene gene2249 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2212 Sgly_2213 Sgly_2213 Sgly_2213 2239965 2240585 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase COGs: COG0558 Phosphatidylglycerophosphate synthase~InterPro IPR000462: IPR004570~KEGG: dhd:Dhaf_3123 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase~PFAM: CDP-alcohol phosphatidyltransferase~PRIAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase~SPTR: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase%3B~TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase~PFAM: CDP-alcohol phosphatidyltransferase~TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase gene gene2250 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2213 Sgly_2214 Sgly_2214 Sgly_2214 2240579 2241907 - SSU ribosomal protein S12P methylthiotransferase COGs: COG0621 2-methylthioadenine synthetase~HAMAP: Ribosomal protein S12 methylthiotransferase RimO~InterPro IPR013848: IPR007197: IPR005918: IPR006638: IPR 005839: IPR005840~KEGG: dsy:DSY1966 hypothetical protein~PFAM: Methylthiotransferase%2C N-terminal%3B Radical SAM%3B Conantokin%2C conserved site~SMART: Elongator protein 3/MiaB/NifB~SPTR: Ribosomal protein S12 methylthiotransferase rimO%3B~TIGRFAM: Ribosomal protein S12 methylthiotransferase RimO%3B Methylthiotransferase~PFAM: Radical SAM superfamily%3B Uncharacterized protein family UPF0004~TIGRFAM: MiaB-like tRNA modifying enzyme YliG%2C TIGR01125%3B RNA modification enzyme%2C MiaB family gene gene2251 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2214 Sgly_2215 Sgly_2215 Sgly_2215 2242025 2242876 - phosphate binding protein COGs: COG0226 ABC-type phosphate transport system periplasmic component~InterPro IPR011862~KEGG: drm:Dred_2106 phosphate binding protein~SPTR: Phosphate binding protein%3B~TIGRFAM: Phosphate binding protein~PFAM: LysR substrate binding domain~TIGRFAM: phosphate binding protein gene gene2252 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2215 Sgly_2216 Sgly_2216 Sgly_2216 2242952 2243722 - transcriptional regulator%2C XRE family COGs: COG1426 conserved hypothetical protein~KEGG: dhd:Dhaf_3128 transcriptional regulator%2C XRE family~SPTR: Transcriptional regulator%2C XRE family gene gene2253 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2216 Sgly_2217 Sgly_2217 Sgly_2217 2243899 2246157 - DNA translocase FtsK COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein~InterPro IPR002543: IPR018541: IPR003593~KEGG: dsy:DSY1973 hypothetical protein~PFAM: Cell divisionFtsK/SpoIIIE%3B DNA translocase ftsK gamma~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: Ftsk gamma domain%3B FtsK/SpoIIIE family gene gene2254 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2217 Sgly_2218 Sgly_2218 Sgly_2218 2246283 2248031 - alpha-phosphoglucomutase COGs: COG1109 Phosphomannomutase~InterPro IPR005844: IPR005845~KEGG: dhd:Dhaf_2815 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I~PFAM: Alpha-D-phosphohexomutase%2C alpha/beta/alpha domain I%3B Alpha-D-phosphohexomutase%2C alpha/beta/alpha domain II~SPTR: Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I%3B~PFAM: Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain III%3B Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain II%3B Phosphoglucomutase/phosphomannomutase%2C C-terminal domain%3B Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain I gene gene2255 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2218 Sgly_2219 Sgly_2219 Sgly_2219 2248123 2249820 - glucose-6-phosphate isomerase COGs: COG0166 Glucose-6-phosphate isomerase~HAMAP: Phosphoglucose isomerase (PGI)~InterPro IPR001672~KEGG: dsy:DSY2034 glucose-6-phosphate isomerase~PFAM: Phosphoglucose isomerase (PGI)~SPTR: Glucose-6-phosphate isomerase%3B~PFAM: Phosphoglucose isomerase gene gene2256 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2219 Sgly_2220 Sgly_2220 Sgly_2220 2250381 2250749 + transcriptional repressor%2C CopY family COGs: COG3682 transcriptional regulator protein~InterPro IPR005650~KEGG: toc:Toce_0329 transcriptional repressor%2C CopY family~PFAM: Penicillinase repressor~SPTR: Transcriptional repressor%2C CopY family%3B~PFAM: Penicillinase repressor gene gene2257 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2220 Sgly_2221 Sgly_2221 Sgly_2221 2256564 2258282 - Urease subunit alpha COGs: COG0804 Urea amidohydrolase (urease) alpha subunit~HAMAP: Urease%2C alpha subunit~InterPro IPR011612: IPR006680: IPR005848~KEGG: cth:Cthe_1816 urease subunit alpha~PFAM: Amidohydrolase 1%3B Urease alpha-subunit%2C N-terminal~PRIAM: Urease~SPTR: Urease subunit alpha%3B~TIGRFAM: Urease%2C alpha subunit~PFAM: Urease alpha-subunit%2C N-terminal domain%3B Amidohydrolase family~TIGRFAM: urease%2C alpha subunit gene gene2262 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2221 Sgly_2222 Sgly_2222 Sgly_2222 2258288 2258656 - Urease subunit beta COGs: COG0832 Urea amidohydrolase (urease) beta subunit~HAMAP: Urease%2C beta subunit~InterPro IPR002019~KEGG: cth:Cthe_1817 urease%2C beta subunit~PFAM: Urease%2C beta subunit~PRIAM: Urease~SPTR: Urease subunit beta%3B~TIGRFAM: Urease%2C beta subunit~PFAM: Urease beta subunit~TIGRFAM: urease%2C beta subunit gene gene2263 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2222 Sgly_2223 Sgly_2223 Sgly_2223 2258671 2258973 - Urease subunit gamma COGs: COG0831 Urea amidohydrolase (urease) gamma subunit~HAMAP: Urease%2C gamma subunit~InterPro IPR002026: IPR012010~KEGG: cth:Cthe_1818 urease%2C gamma subunit~PFAM: Urease%2C alpha/gamma subunit~PRIAM: Urease~SPTR: Urease subunit gamma%3B~TIGRFAM: Urease%2C alpha/gamma subunit~PFAM: Urease%2C gamma subunit~TIGRFAM: urease%2C gamma subunit gene gene2264 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2223 Sgly_2224 Sgly_2224 Sgly_2224 2259011 2259703 - urea ABC transporter ATP-binding protein COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component~InterPro IPR003439: IPR003593: IPR017780~KEGG: cth:Cthe_1819 ABC transporter related protein~PFAM: ABC transporter-like~PRIAM: Sulfate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Urea ABC transporter%2C ATP-binding protein UrtE%3B~TIGRFAM: ABC transporter%2C urea%2C ATP-binding protein%2C UrtE~PFAM: ABC transporter~TIGRFAM: urea ABC transporter%2C ATP-binding protein UrtE gene gene2265 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2224 Sgly_2225 Sgly_2225 Sgly_2225 2259696 2260451 - urea ABC transporter ATP-binding protein COGs: COG4674 Uncharacterized ABC-type transport system ATPase component~InterPro IPR003439: IPR003593: IPR017781~KEGG: cth:Cthe_1820 ABC transporter related protein~PFAM: ABC transporter-like~SMART: ATPase%2C AAA+ type%2C core~SPTR: Urea ABC transporter%2C ATP-binding protein UrtD%3B~TIGRFAM: ABC transporter%2C urea%2C ATP-binding protein%2C UrtD~PFAM: ABC transporter%3B Branched-chain amino acid ATP-binding cassette transporter~TIGRFAM: urea ABC transporter%2C ATP-binding protein UrtD gene gene2266 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2225 Sgly_2226 Sgly_2226 Sgly_2226 2260496 2261581 - urea ABC transporter membrane protein COGs: COG4177 ABC-type branched-chain amino acid transport system permease component~InterPro IPR001851: IPR017778~KEGG: cth:Cthe_1821 inner-membrane translocator~PFAM: Bacterial inner-membrane translocator~SPTR: Urea ABC transporter%2C permease protein UrtC%3B~TIGRFAM: ABC transporter%2C urea%2C permease protein%2C UrtC~PFAM: Branched-chain amino acid transport system / permease component~TIGRFAM: urea ABC transporter%2C permease protein UrtC gene gene2267 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2226 Sgly_2227 Sgly_2227 Sgly_2227 2261612 2262520 - urea ABC transporter membrane protein COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components~InterPro IPR001851: IPR017779~KEGG: cth:Cthe_1822 inner-membrane translocator~PFAM: Bacterial inner-membrane translocator~SPTR: Inner-membrane translocator%3B~TIGRFAM: ABC transporter%2C urea%2C permease protein%2C UrtB~PFAM: Branched-chain amino acid transport system / permease component~TIGRFAM: urea ABC transporter%2C permease protein UrtB gene gene2268 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2227 Sgly_2228 Sgly_2228 Sgly_2228 2262654 2263898 - urea-binding protein COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component~InterPro IPR001828: IPR017777~KEGG: cth:Cthe_1823 extracellular ligand-binding receptor~PFAM: Extracellular ligand-binding receptor~SPTR: Extracellular ligand-binding receptor%3B~TIGRFAM: ABC transporter%2C urea%2C substrate-binding%2C UrtA~PFAM: Receptor family ligand binding region~TIGRFAM: urea ABC transporter%2C urea binding protein gene gene2269 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2228 Sgly_2229 Sgly_2229 Sgly_2229 2264186 2265265 - two component transcriptional regulator%2C AraC family COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain~InterPro IPR001789: IPR000005: IPR018060~KEGG: cth:Cthe_1824 two component AraC family transcriptional regulator~PFAM: Signal transduction response regulator%2C receiver domain%3B Helix-turn-helix%2C AraC type~SMART: Signal transduction response regulator%2C receiver domain%3B Helix-turn-helix%2C AraC domain~SPTR: Two component transcriptional regulator%2C AraC family%3B~PFAM: Response regulator receiver domain%3B Bacterial regulatory helix-turn-helix proteins%2C AraC family gene gene2270 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2229 Sgly_2230 Sgly_2230 Sgly_2230 2265518 2268202 - multi-sensor hybrid histidine kinase COGs: COG0642 Signal transduction histidine kinase~InterPro IPR003660: IPR003661: IPR003594: IPR001789: IPR 008207~KEGG: cth:Cthe_1825 Hpt sensor hybrid histidine kinase~PFAM: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain%3B HAMP linker domain%3B Signal transduction response regulator%2C receiver domain%3B Signal transduction histidine kinase%2C phosphotransfer (Hpt) domain~SMART: Signal transduction response regulator%2C receiver domain%3B ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain~SPTR: Multi-sensor hybrid histidine kinase%3B~PFAM: Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B Response regulator receiver domain%3B His Kinase A (phosphoacceptor) domain%3B Hpt domain gene gene2271 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2230 Sgly_2231 Sgly_2231 Sgly_2231 2268416 2269504 + response regulator receiver sensor signal transduction histidine kinase COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase)~InterPro IPR001789: IPR003661: IPR003594~KEGG: cth:Cthe_1826 response regulator receiver sensor signal transduction histidine kinase~PFAM: Signal transduction response regulator%2C receiver domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain%3B ATPase-like%2C ATP-binding domain~SMART: Signal transduction response regulator%2C receiver domain%3B ATPase-like%2C ATP-binding domain~SPTR: Response regulator receiver sensor signal transduction histidine kinase%3B~PFAM: Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B Response regulator receiver domain%3B His Kinase A (phosphoacceptor) domain gene gene2272 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2231 Sgly_2232 Sgly_2232 Sgly_2232 2271066 2272730 - Ribocuclease J COGs: COG0595 hydrolase of the metallo-beta-lactamase superfamily~InterPro IPR011108: IPR004613~KEGG: dsy:DSY2497 hypothetical protein~PFAM: RNA-metabolising metallo-beta-lactamase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Ribonuclease J~PFAM: Metallo-beta-lactamase superfamily%3B RNA-metabolising metallo-beta-lactamase~TIGRFAM: conserved hypothetical protein gene gene2287 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2232 Sgly_2233 Sgly_2233 Sgly_2233 2273173 2274060 - dihydrodipicolinate synthase COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase~HAMAP: Dihydrodipicolinate synthase~InterPro IPR002220: IPR005263~KEGG: dsy:DSY2498 hypothetical protein~PFAM: Dihydrodipicolinate synthetase~PRIAM: Dihydrodipicolinate synthase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Dihydrodipicolinate synthase subfamily~PFAM: Dihydrodipicolinate synthetase family~TIGRFAM: dihydrodipicolinate synthase gene gene2288 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2233 Sgly_2234 Sgly_2234 Sgly_2234 2274106 2275335 - aspartate kinase COGs: COG0527 Aspartokinase~InterPro IPR001048: IPR002912: IPR001341: IPR005260~KEGG: dhd:Dhaf_3659 aspartate kinase I~PFAM: Aspartate/glutamate/uridylate kinase%3B Amino acid-binding ACT~SPTR: Aspartokinase%3B~TIGRFAM: Aspartate kinase%2C monofunctional class%3B Aspartate kinase domain~PFAM: Amino acid kinase family~TIGRFAM: aspartate kinase%2C monofunctional class%3B aspartate kinase gene gene2289 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2234 Sgly_2235 Sgly_2235 Sgly_2235 2275355 2276347 - aspartate semialdehyde dehydrogenase COGs: COG0136 Aspartate-semialdehyde dehydrogenase~InterPro IPR000534: IPR012280: IPR005986~KEGG: dhd:Dhaf_3660 aspartate-semialdehyde dehydrogenase~PFAM: Semialdehyde dehydrogenase%2C dimerisation domain%3B Semialdehyde dehydrogenase%2C NAD-binding~PRIAM: Aspartate-semialdehyde dehydrogenase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Aspartate-semialdehyde dehydrogenase%2C bacterial~PFAM: Semialdehyde dehydrogenase%2C dimerisation domain%3B Semialdehyde dehydrogenase%2C NAD binding domain~TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) gene gene2290 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2235 Sgly_2236 Sgly_2236 Sgly_2236 2276451 2277044 - dipicolinic acid synthetase%2C B subunit InterPro IPR003382: IPR014214~KEGG: dhd:Dhaf_3661 dipicolinate synthase subunit B~PFAM: Flavoprotein~SPTR: Dipicolinic acid synthetase%2C B subunit%3B~TIGRFAM: Dipicolinic acid synthetase%2C subunit B~PFAM: Flavoprotein~TIGRFAM: dipicolinic acid synthetase%2C B subunit gene gene2291 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2236 Sgly_2237 Sgly_2237 Sgly_2237 2277034 2277981 - dipicolinate synthase subunit A KEGG: dhd:Dhaf_3662 dipicolinate synthase subunit A~SPTR: Putative uncharacterized protein%3B~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain~TIGRFAM: dipicolinic acid synthetase%2C A subunit gene gene2292 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2237 Sgly_2238 Sgly_2238 Sgly_2238 2278065 2278868 - dihydrodipicolinate reductase COGs: COG0289 Dihydrodipicolinate reductase~HAMAP: Dihydrodipicolinate reductase%2C bacterial/plant~InterPro IPR000846: IPR011770~KEGG: dhd:Dhaf_3663 dihydrodipicolinate reductase~PFAM: Dihydrodipicolinate reductase~PRIAM: Dihydrodipicolinate reductase~SPTR: Dihydrodipicolinate reductase%3B~TIGRFAM: Dihydrodipicolinate reductase%2C bacterial/plant~manually curated~PFAM: Dihydrodipicolinate reductase%2C N-terminus%3B Dihydrodipicolinate reductase%2C C-terminus~TIGRFAM: dihydrodipicolinate reductase gene gene2293 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2238 Sgly_2239 Sgly_2239 Sgly_2239 2278993 2279253 - sporulation protein%2C YlmC/YmxH family InterPro IPR014238~KEGG: dhd:Dhaf_3664 sporulation protein%2C YlmC/YmxH family~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Sporulation protein YlmC/YmxH~PFAM: PRC-barrel domain~TIGRFAM: sporulation protein%2C YlmC/YmxH family gene gene2294 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2239 Sgly_2240 Sgly_2240 Sgly_2240 2279253 2279570 - hypothetical protein KEGG: dhd:Dhaf_3665 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2295 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2240 Sgly_2241 Sgly_2241 Sgly_2241 2279676 2280173 - deoxyUTP pyrophosphatase COGs: COG0756 dUTPase~InterPro IPR008180~KEGG: mpe:MYPE1000 deoxyuridine 5'triphosphate nucleotidohydrolase dUTPase~PFAM: DeoxyUTP pyrophosphatase domain~SPTR: Deoxyuridine 5'-triphosphate nucleotidohydrolase%3B~PFAM: dUTPase~TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) gene gene2296 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2241 Sgly_2242 Sgly_2242 Sgly_2242 2280190 2281512 - processing peptidase COGs: COG0612 Zn-dependent peptidase~InterPro IPR011765: IPR007863~KEGG: dhd:Dhaf_3667 peptidase M16 domain protein~PFAM: Peptidase M16%2C N-terminal%3B Peptidase M16%2C C-terminal~PRIAM: processing peptidase~SPTR: Peptidase M16 domain protein%3B~PFAM: Peptidase M16 inactive domain%3B Insulinase (Peptidase family M16) gene gene2297 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2242 Sgly_2243 Sgly_2243 Sgly_2243 2281538 2282416 - Serine-type D-Ala-D-Ala carboxypeptidase COGs: COG1686 D-alanyl-D-alanine carboxypeptidase~InterPro IPR001967~KEGG: dhd:Dhaf_3668 serine-type D-Ala-D-Ala carboxypeptidase~PFAM: Peptidase S11%2C D-alanyl-D-alanine carboxypeptidase A~PRIAM: Serine-type D-Ala-D-Ala carboxypeptidase~SPTR: Serine-type D-Ala-D-Ala carboxypeptidase%3B~PFAM: D-alanyl-D-alanine carboxypeptidase gene gene2298 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2243 Sgly_2244 Sgly_2244 Sgly_2244 2282465 2283214 - polysaccharide deacetylase COGs: COG0726 xylanase/chitin deacetylase~InterPro IPR002509~KEGG: dsy:DSY2508 hypothetical protein~PFAM: Polysaccharide deacetylase~SPTR: Putative uncharacterized protein%3B~PFAM: Polysaccharide deacetylase gene gene2299 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2244 Sgly_2245 Sgly_2245 Sgly_2245 2283299 2285440 - Polyribonucleotide nucleotidyltransferase COGs: COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)~HAMAP: Polyribonucleotide nucleotidyltransferase~InterPro IPR001247: IPR015847: IPR015848: IPR018111: IPR 003029: IPR004087: IPR012162~KEGG: dhd:Dhaf_3670 polynucleotide phosphorylase/polyadenylase~PFAM: Exoribonuclease%2C phosphorolytic domain 1%3B Exoribonuclease%2C phosphorolytic domain 2%3B Polynucleotide phosphorylase%2C phosphorolytic RNA-binding%2C bacterial/organelle-type%3B K Homology%2C type 1%2C subgroup%3B Ribosomal protein S1%2C RNA binding domain~PRIAM: Polyribonucleotide nucleotidyltransferase~SPTR: Polyribonucleotide nucleotidyltransferase%3B~TIGRFAM: Polyribonucleotide nucleotidyltransferase~PFAM: KH domain%3B S1 RNA binding domain%3B 3' exoribonuclease family%2C domain 1%3B 3' exoribonuclease family%2C domain 2%3B Polyribonucleotide nucleotidyltransferase%2C RNA binding domain~TIGRFAM: polyribonucleotide nucleotidyltransferase gene gene2300 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2245 Sgly_2246 Sgly_2246 Sgly_2246 2285597 2285863 - SSU ribosomal protein S15P COGs: COG0184 Ribosomal protein S15P/S13E~InterPro IPR000589: IPR005290~KEGG: dhd:Dhaf_3671 30S ribosomal protein S15~PFAM: Ribosomal protein S15~SPTR: 30S ribosomal protein S15%3B~TIGRFAM: Ribosomal protein S15%2C bacterial-type~PFAM: Ribosomal protein S15~TIGRFAM: ribosomal protein S15%2C bacterial/organelle gene gene2301 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2246 Sgly_2247 Sgly_2247 Sgly_2247 2285963 2286895 - riboflavin kinase%3B FMN adenylyltransferase COGs: COG0196 FAD synthase~InterPro IPR015864: IPR015865: IPR004821: IPR002606~KEGG: dhd:Dhaf_3672 riboflavin biosynthesis protein RibF~PFAM: Riboflavin kinase%3B FAD synthetase~PRIAM: FAD synthetase.%2C Riboflavin kinase~SPTR: FAD synthase%3B~TIGRFAM: Riboflavin kinase/FAD synthetase%3B Cytidyltransferase-related~PFAM: Riboflavin kinase%3B FAD synthetase~TIGRFAM: riboflavin kinase/FMN adenylyltransferase%3B cytidyltransferase-related domain gene gene2302 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2247 Sgly_2248 Sgly_2248 Sgly_2248 2286932 2287828 - tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase~HAMAP: tRNA pseudouridine synthase B~InterPro IPR002501: IPR014780~KEGG: dsy:DSY2514 hypothetical protein~PFAM: Pseudouridine synthase II%2C TruB%2C N-terminal~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Pseudouridine synthase II%2C TruB%2C N-terminal%2C bacterial-type~PFAM: TruB family pseudouridylate synthase (N terminal domain)~TIGRFAM: tRNA pseudouridine 55 synthase gene gene2303 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2248 Sgly_2249 Sgly_2249 Sgly_2249 2287812 2288798 - phosphoesterase RecJ domain protein COGs: COG0618 Exopolyphosphatase-related protein~InterPro IPR001667: IPR003156~KEGG: dhd:Dhaf_3674 phosphoesterase RecJ domain protein~PFAM: Phosphoesterase%2C RecJ-like%3B Phosphoesterase%2C DHHA1~SPTR: Phosphoesterase RecJ domain protein%3B~PFAM: DHH family%3B DHHA1 domain gene gene2304 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2249 Sgly_2250 Sgly_2250 Sgly_2250 2288779 2289153 - ribosome-binding factor A COGs: COG0858 Ribosome-binding factor A~HAMAP: Ribosome-binding factor A~InterPro IPR000238~KEGG: dhd:Dhaf_3675 ribosome-binding factor A~PFAM: Ribosome-binding factor A~SPTR: Ribosome-binding factor A%3B~TIGRFAM: Ribosome-binding factor A~PFAM: Ribosome-binding factor A~TIGRFAM: ribosome-binding factor A gene gene2305 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2250 Sgly_2251 Sgly_2251 Sgly_2251 2289179 2291920 - bacterial translation initiation factor 2 (bIF-2) COGs: COG0532 Translation initiation factor 2 (IF-2%3B GTPase)~InterPro IPR006847: IPR000795: IPR004161: IPR000178: IPR 005225~KEGG: dhd:Dhaf_3676 translation initiation factor IF-2~PFAM: Protein synthesis factor%2C GTP-binding%3B Translation initiation factor IF-2%2C N-terminal%3B Translation elongation factor EFTu/EF1A%2C domain 2~SPTR: Translation initiation factor IF-2%3B~TIGRFAM: Initiation factor 2%3B Small GTP-binding protein~PFAM: Elongation factor Tu domain 2%3B Translation-initiation factor 2%3B Translation initiation factor IF-2%2C N-terminal region%3B Elongation factor Tu GTP binding domain~TIGRFAM: small GTP-binding protein domain%3B translation initiation factor IF-2 gene gene2306 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2251 Sgly_2252 Sgly_2252 Sgly_2252 2291944 2292246 - LSU ribosomal protein L7AE InterPro IPR004038~KEGG: dhd:Dhaf_3677 ribosomal protein L7Ae/L30e/S12e/Gadd45~PFAM: Ribosomal protein L7Ae/L30e/S12e/Gadd45~SPTR: Ribosomal protein L7Ae/L30e/S12e/Gadd45%3B~PFAM: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family gene gene2307 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2252 Sgly_2253 Sgly_2253 Sgly_2253 2292243 2292509 - protein of unknown function DUF448 COGs: COG2740 nucleic-acid-binding protein implicated in transcription termination~InterPro IPR007393~KEGG: dhd:Dhaf_3678 protein of unknown function DUF448~PFAM: Protein of unknown function DUF448~SPTR: Putative uncharacterized protein%3B~manually curated~PFAM: Protein of unknown function (DUF448) gene gene2308 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2253 Sgly_2254 Sgly_2254 Sgly_2254 2292528 2293817 - NusA antitermination factor COGs: COG0195 Transcription elongation factor~InterPro IPR013735: IPR003029: IPR010213~KEGG: dhd:Dhaf_3679 NusA antitermination factor~PFAM: Transcription factor NusA%2C N-terminal%3B Ribosomal protein S1%2C RNA binding domain~SPTR: NusA antitermination factor%3B~TIGRFAM: Transcription termination factor NusA~PFAM: NusA N-terminal domain%3B S1 RNA binding domain~TIGRFAM: transcription termination factor NusA gene gene2309 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2254 Sgly_2255 Sgly_2255 Sgly_2255 2293836 2294294 - Ribosome maturation factor rimP HAMAP: Uncharacterised protein family UPF0090%2C bacteria~InterPro IPR003728: IPR020790~KEGG: dsy:DSY2521 hypothetical protein~PFAM: Uncharacterised protein family UPF0090~SPTR: Ribosome maturation factor rimP%3B~PFAM: Uncharacterised BCR%2C YhbC family COG0779 gene gene2310 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2255 Sgly_2256 Sgly_2256 Sgly_2256 2294433 2298185 - DNA polymerase III%2C alpha subunit COGs: COG2176 DNA polymerase III alpha subunit (gram-positive type)~InterPro IPR004365: IPR004013: IPR011708: IPR003141: IPR 006308~KEGG: hmo:HM1_2272 DNA polymerase III%2C alpha subunit%2C gram-positive type~PFAM: Bacterial DNA polymerase III%2C alpha subunit%3B PHP%2C C-terminal%3B Nucleic acid binding%2C OB-fold%2C tRNA/helicase-type~PRIAM: DNA-directed DNA polymerase~SMART: Polymerase/histidinol phosphatase%2C N-terminal~SPTR: DNA polymerase iii%2C alpha subunit%2C gram-positive type%3B~TIGRFAM: DNA polymerase III%2C alpha subunit%2C Gram-positive type~PFAM: DNA polymerase III polC-type N-terminus%3B Bacterial DNA polymerase III alpha subunit%3B PHP domain~TIGRFAM: DNA polymerase III%2C alpha chain%2C Gram-positive type gene gene2311 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2256 Sgly_2257 Sgly_2257 Sgly_2257 2298261 2299976 - Prolyl-tRNA synthetase COGs: COG0442 Prolyl-tRNA synthetase~HAMAP: Prolyl-tRNA synthetase~InterPro IPR002314: IPR007214: IPR004154: IPR004500~KEGG: dhd:Dhaf_3699 prolyl-tRNA synthetase~PFAM: Aminoacyl-tRNA synthetase%2C class II (G/ H/ P/ S)%2C conserved domain%3B YbaK/aminoacyl-tRNA synthetase-associated domain%3B Anticodon-binding~SPTR: Prolyl-tRNA synthetase%3B~TIGRFAM: Prolyl-tRNA synthetase%2C class IIa%2C bacterial~PFAM: YbaK / prolyl-tRNA synthetases associated domain%3B Anticodon binding domain%3B tRNA synthetase class II core domain (G%2C H%2C P%2C S and T)~TIGRFAM: prolyl-tRNA synthetase%2C family II gene gene2312 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2257 Sgly_2258 Sgly_2258 Sgly_2258 2299973 2301067 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase COGs: COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis~HAMAP: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase%2C bacterial-type~InterPro IPR004588~KEGG: dhd:Dhaf_3700 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase~PFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase%2C bacterial-type~SPTR: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase%3B~TIGRFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase%2C bacterial-type~PFAM: GcpE protein~TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase gene gene2313 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2258 Sgly_2259 Sgly_2259 Sgly_2259 2301142 2302200 - membrane-associated zinc metalloprotease COGs: COG0750 membrane-associated Zn-dependent protease 1~InterPro IPR008915: IPR001478: IPR004387~KEGG: dsy:DSY2538 hypothetical protein~PFAM: Peptidase M50%3B PDZ/DHR/GLGF~SMART: PDZ/DHR/GLGF~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Peptidase M50%2C putative membrane-associated zinc metallopeptidase~PFAM: Peptidase family M50%3B PDZ domain (Also known as DHR or GLGF)~TIGRFAM: RIP metalloprotease RseP gene gene2314 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2259 Sgly_2260 Sgly_2260 Sgly_2260 2302243 2303397 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase COGs: COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase~HAMAP: 1-deoxy-D-xylulose 5-phosphate reductoisomerase~InterPro IPR013512: IPR013644: IPR003821~KEGG: dhd:Dhaf_3702 1-deoxy-D-xylulose 5-phosphate reductoisomerase~PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase%2C N-terminal%3B 1-deoxy-D-xylulose 5-phosphate reductoisomerase%2C C-terminal~PRIAM: 1-deoxy-D-xylulose-5-phosphate reductoisomerase~SPTR: 1-deoxy-D-xylulose 5-phosphate reductoisomerase%3B~TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase~PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase%3B 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal~TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase gene gene2315 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2260 Sgly_2261 Sgly_2261 Sgly_2261 2303405 2304514 - sporulation integral membrane protein YtvI COGs: COG0628 permease~InterPro IPR002549: IPR014227~KEGG: dhd:Dhaf_3703 sporulation integral membrane protein YtvI~PFAM: Uncharacterised protein family UPF0118~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Sporulation integral membrane protein YtvI~PFAM: Domain of unknown function DUF20~TIGRFAM: sporulation integral membrane protein YtvI gene gene2316 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2261 Sgly_2262 Sgly_2262 Sgly_2262 2304549 2305343 - phosphatidate cytidylyltransferase COGs: COG0575 CDP-diglyceride synthetase~InterPro IPR000374~KEGG: dsy:DSY2541 hypothetical protein~PFAM: Phosphatidate cytidylyltransferase~SPTR: Phosphatidate cytidylyltransferase%3B~PFAM: Cytidylyltransferase family gene gene2317 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2262 Sgly_2263 Sgly_2263 Sgly_2263 2305346 2306161 - Undecaprenyl pyrophosphate synthetase COGs: COG0020 Undecaprenyl pyrophosphate synthase~HAMAP:Di-trans-poly-cis-decaprenylcistransferase-li ke~InterPro IPR001441~KEGG: drm:Dred_1973 undecaprenyl diphosphate synthase~PFAM:Di-trans-poly-cis-decaprenylcistransferase-lik e~PRIAM: Di-trans%2Cpoly-cis-decaprenylcistransferase~SPTR: Undecaprenyl pyrophosphate synthetase%3B~TIGRFAM:Di-trans-poly-cis-decaprenylcistransferase- like~PFAM: Putative undecaprenyl diphosphate synthase~TIGRFAM: undecaprenyl diphosphate synthase gene gene2318 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2263 Sgly_2264 Sgly_2264 Sgly_2264 2306189 2306389 - hypothetical protein KEGG: sth:STH1495 hypothetical protein gene gene2319 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2264 Sgly_2265 Sgly_2265 Sgly_2265 2306392 2306949 - ribosome recycling factor COGs: COG0233 Ribosome recycling factor~HAMAP: Ribosome recycling factor%2C bacterial-like~InterPro IPR002661: IPR015998~KEGG: dhd:Dhaf_3706 ribosome recycling factor~PFAM: Ribosome recycling factor~SPTR: Ribosome-recycling factor%3B~TIGRFAM: Ribosome recycling factor~PFAM: Ribosome recycling factor~TIGRFAM: ribosome recycling factor gene gene2320 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2265 Sgly_2266 Sgly_2266 Sgly_2266 2306951 2307667 - uridylate kinase COGs: COG0528 Uridylate kinase~InterPro IPR001048: IPR015963~KEGG: dhd:Dhaf_3707 uridylate kinase~PFAM: Aspartate/glutamate/uridylate kinase~SPTR: Uridylate kinase%3B~TIGRFAM: Uridylate kinase%2C bacteria~PFAM: Amino acid kinase family~TIGRFAM: uridylate kinase gene gene2321 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2266 Sgly_2267 Sgly_2267 Sgly_2267 2307783 2308436 - translation elongation factor Ts (EF-Ts) COGs: COG0264 Translation elongation factor Ts~HAMAP: Translation elongation factor EFTs/EF1B~InterPro IPR000449: IPR014039: IPR001816~KEGG: dhd:Dhaf_3708 elongation factor Ts~PFAM: Translation elongation factor EFTs/EF1B%2C dimerisation%3B Ubiquitin-associated/translation elongation factor EF1B%2C N-terminal~SPTR: Elongation factor Ts%3B~TIGRFAM: Translation elongation factor EFTs/EF1B~PFAM: Elongation factor TS%3B UBA/TS-N domain~TIGRFAM: translation elongation factor Ts gene gene2322 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2267 Sgly_2268 Sgly_2268 Sgly_2268 2308511 2309311 - SSU ribosomal protein S2P COGs: COG0052 Ribosomal protein S2~InterPro IPR001865: IPR005706~KEGG: dhd:Dhaf_3709 30S ribosomal protein S2~PFAM: Ribosomal protein S2~SPTR: 30S ribosomal protein S2%3B~TIGRFAM: Ribosomal protein S2%2C bacteria/mitochondria/plastid~PFAM: Ribosomal protein S2~TIGRFAM: ribosomal protein S2%2C bacterial type gene gene2323 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2268 Sgly_2269 Sgly_2269 Sgly_2269 2309390 2309842 - hypothetical protein KEGG: dhd:Dhaf_3710 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2324 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2269 Sgly_2270 Sgly_2270 Sgly_2270 2309870 2310655 - GTP-sensing pleiotropic transcriptional repressor CodY COGs: COG4465 Pleiotropic transcriptional repressor~InterPro IPR010312: IPR013198: IPR014154~KEGG: dhd:Dhaf_3711 transcriptional repressor CodY~PFAM: GTP-sensing transcriptional pleiotropic repressor CodY%2C N-terminal%3B GTP-sensing helix-turn-helix%2C CodY%2C C-terminal~SPTR: Putative uncharacterized protein%3B~TIGRFAM: GTP-sensing transcriptional pleiotropic repressor CodY~PFAM: CodY helix-turn-helix domain%3B CodY GAF-like domain~TIGRFAM: GTP-sensing transcriptional pleiotropic repressor CodY gene gene2325 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2270 Sgly_2271 Sgly_2271 Sgly_2271 2310744 2312126 - ATP-dependent hsl protease ATP-binding subunit hslU COGs: COG1220 ATP-dependent protease HslVU (ClpYQ) ATPase subunit~HAMAP: Heat shock protein HslU~InterPro IPR013093: IPR003593: IPR004491~KEGG: dhd:Dhaf_3712 ATP-dependent protease ATP-binding subunit HslU~PFAM: ATPase%2C AAA-2~SMART: ATPase%2C AAA+ type%2C core~SPTR: ATP-dependent protease ATPase subunit HslU%3B~TIGRFAM: Heat shock protein HslU~PFAM: AAA domain (Cdc48 subfamily)%3B C-terminal%2C D2-small domain%2C of ClpB protein%3B ATPase family associated with various cellular activities (AAA)~TIGRFAM: ATP-dependent protease HslVU%2C ATPase subunit gene gene2326 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2271 Sgly_2272 Sgly_2272 Sgly_2272 2312144 2312674 - ATP dependent peptidase CodWX%2C CodW component COGs: COG5405 ATP-dependent protease HslVU (ClpYQ) peptidase subunit~HAMAP: ATP-dependent protease hslV~InterPro IPR001353~KEGG: dhd:Dhaf_3713 ATP-dependent protease peptidase subunit~PFAM: Proteasome%2C subunit alpha/beta~SPTR: ATP-dependent protease subunit HslV%3B~TIGRFAM: ATP-dependent protease HslVU%2C peptidase subunit~PFAM: Proteasome subunit~TIGRFAM: ATP-dependent protease HslVU%2C peptidase subunit gene gene2327 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2272 Sgly_2273 Sgly_2273 Sgly_2273 2312821 2313723 - Tyrosine recombinase xerC COGs: COG4974 Site-specific recombinase XerD~HAMAP: Tyrosine recombinase xerC~InterPro IPR004107: IPR002104~KEGG: dhd:Dhaf_3715 integrase family protein~PFAM: Integrase%2C catalytic core%2C phage%3B Integrase%2C N-terminal SAM-like%2C phage~SPTR: Integrase family protein%3B~PFAM: Phage integrase%2C N-terminal SAM-like domain%3B Phage integrase family~TIGRFAM: tyrosine recombinase XerC gene gene2328 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2273 Sgly_2274 Sgly_2274 Sgly_2274 2313710 2315044 - Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO COGs: COG1206 NAD(FAD)-utilizing enzyme possibly involved in translation~HAMAP:Methylenetetrahydrofolate--tRNA-(uracil-5-)-m ethyltransferase%2CTrmFO~InterPro IPR002218: IPR004417~KEGG: dhd:Dhaf_3716 tRNA (uracil-5-)-methyltransferase Gid~PFAM: Glucose-inhibited division protein A-related~PRIAM:Methylenetetrahydrofolate--tRNA-(uracil-5-)-m ethyltransferase(FADH(2)-oxidizing)~SPTR:Methylenetetrahydrofolate--tRNA-(uracil-5-)-me thyltransferasetrmFO%3B~TIGRFAM:Methylenetetrahydrofolate--tRNA-(uracil-5-) -methyltransferase%2CTrmFO~PFAM: Glucose inhibited division protein A~TIGRFAM: tRNA:m(5)U-54 methyltransferase gene gene2329 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2274 Sgly_2275 Sgly_2275 Sgly_2275 2315067 2317166 - DNA topoisomerase I COGs: COG0550 Topoisomerase IA~InterPro IPR006171: IPR013497: IPR013498: IPR006154: IPR 003601: IPR003602: IPR005733~KEGG: dhd:Dhaf_3717 DNA topoisomerase I~PFAM: DNA topoisomerase%2C type IA%2C central%3B Toprim domain%3B DNA topoisomerase%2C type IA%2C zn finger~PRIAM: DNA topoisomerase~SMART: DNA topoisomerase%2C type IA%2C DNA-binding%3B DNA topoisomerase%2C type IA%2C domain 2%3B Toprim domain%2C subgroup~SPTR: DNA topoisomerase%3B~TIGRFAM: DNA topoisomerase I%2C bacterial-type~PFAM: Toprim domain%3B Topoisomerase DNA binding C4 zinc finger%3B DNA topoisomerase~TIGRFAM: DNA topoisomerase I%2C bacterial gene gene2330 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2275 Sgly_2276 Sgly_2276 Sgly_2276 2317217 2318368 - DNA protecting protein DprA COGs: COG0758 Rossmann fold nucleotide-binding protein involved in DNA uptake~InterPro IPR003488~KEGG: dhd:Dhaf_3718 DNA protecting protein DprA~PFAM: DNA recombination-mediator protein A~SPTR: Putative uncharacterized protein%3B~TIGRFAM: DNA recombination-mediator protein A~PFAM: DNA recombination-mediator protein A~TIGRFAM: DNA protecting protein DprA gene gene2331 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2276 Sgly_2277 Sgly_2277 Sgly_2277 2318404 2319231 - Endonuclease IV COGs: COG0648 Endonuclease IV~InterPro IPR012307: IPR001719~KEGG: dsy:DSY2560 hypothetical protein~PFAM: Xylose isomerase%2C TIM barrel domain~SMART: Endodeoxyribonuclease IV~SPTR: Putative uncharacterized protein%3B~PFAM: Xylose isomerase-like TIM barrel gene gene2332 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2277 Sgly_2278 Sgly_2278 Sgly_2278 2319272 2320855 - D-3-phosphoglycerate dehydrogenase COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase~InterPro IPR006139: IPR006140: IPR002912: IPR006236~KEGG: chy:CHY_2698 D-3-phosphoglycerate dehydrogenase~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD-binding%3B D-isomer specific 2-hydroxyacid dehydrogenase%2C catalytic domain%3B Amino acid-binding ACT~PRIAM: Phosphoglycerate dehydrogenase~SPTR: D-3-phosphoglycerate dehydrogenase%3B~TIGRFAM: D-3-phosphoglycerate dehydrogenase~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain%3B ACT domain%3B D-isomer specific 2-hydroxyacid dehydrogenase%2C catalytic domain~TIGRFAM: D-3-phosphoglycerate dehydrogenase gene gene2333 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2278 Sgly_2279 Sgly_2279 Sgly_2279 2321182 2321835 - NLP/P60 protein COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein)~InterPro IPR000064~KEGG: dhd:Dhaf_3043 NLP/P60 protein~PFAM: NLP/P60~SPTR: NLP/P60 protein%3B~PFAM: NlpC/P60 family gene gene2334 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2279 Sgly_2280 Sgly_2280 Sgly_2280 2322043 2322312 + small acid-soluble spore protein alpha/beta type InterPro IPR001448~KEGG: adg:Adeg_1463 small acid-soluble spore protein alpha/beta type~PFAM: Small acid-soluble spore protein%2C alpha/beta-type~SPTR: Small acid-soluble spore protein alpha/beta type%3B~PFAM: Small%2C acid-soluble spore proteins%2C alpha/beta type gene gene2335 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2280 Sgly_2281 Sgly_2281 Sgly_2281 2322373 2323128 - UBA/THIF-type NAD/FAD binding protein COGs: COG1179 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 1~InterPro IPR000594~KEGG: dhd:Dhaf_1368 UBA/ThiF-type NAD/FAD binding protein~PFAM: UBA/THIF-type NAD/FAD binding fold~SPTR: UBA/THIF-type NAD/FAD binding protein%3B~PFAM: ThiF family gene gene2336 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2281 Sgly_2282 Sgly_2282 Sgly_2282 2323125 2324183 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain~HAMAP: tRNA-specific 2-thiouridylase~InterPro IPR004506~KEGG: tjr:TherJR_1911 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase~SPTR: tRNA-specific 2-thiouridylase mnmA%3B~TIGRFAM: tRNA-specific 2-thiouridylase~PFAM: tRNA methyl transferase~TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase gene gene2337 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2282 Sgly_2283 Sgly_2283 Sgly_2283 2324249 2325040 - Protein fdhD COGs: COG1526 Uncharacterized protein required for formate dehydrogenase activity~HAMAP: Protein fdhD~InterPro IPR003786~KEGG: pth:PTH_2610 hypothetical protein~PFAM: Formate dehydrogenase%2C subunit FdhD~SPTR: Protein fdhD homolog%3B~TIGRFAM: Formate dehydrogenase%2C subunit FdhD~PFAM: FdhD/NarQ family~TIGRFAM: formate dehydrogenase family accessory protein FdhD gene gene2338 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2283 Sgly_2284 Sgly_2284 Sgly_2284 2325217 2325933 + serine O-acetyltransferase COGs: COG1045 Serine acetyltransferase~InterPro IPR001451: IPR005881~KEGG: adg:Adeg_0402 serine O-acetyltransferase~PRIAM: Serine O-acetyltransferase~SPTR: Serine O-acetyltransferase%3B~TIGRFAM: Serine O-acetyltransferase~PFAM: Serine acetyltransferase%2C N-terminal~TIGRFAM: serine O-acetyltransferase gene gene2339 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2284 Sgly_2285 Sgly_2285 Sgly_2285 2326030 2326974 - 2-nitropropane dioxygenase NPD COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase~InterPro IPR004136~KEGG: hmo:HM1_2167 2-nitropropane dioxygenase~PFAM: 2-nitropropane dioxygenase%2C NPD~SPTR: 2-nitropropane dioxygenase%3B~PFAM: 2-nitropropane dioxygenase gene gene2340 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2285 Sgly_2286 Sgly_2286 Sgly_2286 2327294 2328118 + DNA end-binding protein Ku COGs: COG1273 conserved hypothetical protein~HAMAP: DNA repair protein~InterPro IPR006164: IPR009187~KEGG: bbe:BBR47_36410 YkoV protein~PFAM: DNA helicase%2C ATP-dependent%2C Ku type~SMART: DNA helicase%2C ATP-dependent%2C Ku type~SPTR: YkoV protein%3B~TIGRFAM: Ku%2C prokaryotic type~PFAM: Ku70/Ku80 beta-barrel domain~TIGRFAM: Ku protein%2C prokaryotic gene gene2341 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2286 Sgly_2287 Sgly_2287 Sgly_2287 2328360 2328866 + hypothetical protein KEGG: amt:Amet_3741 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2342 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2287 Sgly_2288 Sgly_2288 Sgly_2288 2328948 2330003 + hypothetical protein KEGG: dhd:Dhaf_4294 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: PEGA domain gene gene2343 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2288 Sgly_2289 Sgly_2289 Sgly_2289 2330054 2330896 - VanW family protein COGs: COG2720 Uncharacterized vancomycin resistance protein~InterPro IPR007391~KEGG: dhd:Dhaf_1773 VanW family protein~PFAM: VanW~SPTR: VanW family protein%3B~PFAM: VanW like protein gene gene2344 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2289 Sgly_2290 Sgly_2290 Sgly_2290 2330950 2331276 - UPF0060 membrane protein ynfA COGs: COG1742 conserved hypothetical protein~HAMAP: Uncharacterised protein family UPF0060~InterPro IPR003844~KEGG: dsy:DSY4629 hypothetical protein~PFAM: Uncharacterised protein family UPF0060~SPTR: UPF0060 membrane protein DSY4629%3B~PFAM: Uncharacterised BCR%2C YnfA/UPF0060 family gene gene2345 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2290 Sgly_2291 Sgly_2291 Sgly_2291 2331371 2331835 - GCN5-related N-acetyltransferase InterPro IPR000182~KEGG: dfe:Dfer_1018 GCN5-related N-acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: GCN5-related N-acetyltransferase%3B~PFAM: Acetyltransferase (GNAT) family gene gene2346 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2291 Sgly_2292 Sgly_2292 Sgly_2292 2331887 2333131 - hypothetical protein KEGG: bfo:BRAFLDRAFT_67949 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2347 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2292 Sgly_2293 Sgly_2293 Sgly_2293 2333174 2334244 - hypothetical protein KEGG: cyp:PCC8801_3617 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2348 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2293 Sgly_2294 Sgly_2294 Sgly_2294 2334320 2335846 - Mg chelatase%2C subunit ChlI COGs: COG0606 ATPase with chaperone activity~InterPro IPR000523: IPR003593: IPR004482~KEGG: dhd:Dhaf_3733 Mg chelatase%2C subunit ChlI~PFAM: Magnesium chelatase%2C ChlI subunit~SMART: ATPase%2C AAA+ type%2C core~SPTR: Mg chelatase%2C subunit ChlI%3B~TIGRFAM: Mg chelatase-related protein~PFAM: Magnesium chelatase%2C subunit ChlI~TIGRFAM: Mg chelatase-related protein gene gene2349 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2294 Sgly_2295 Sgly_2295 Sgly_2295 2335983 2337752 - methyl-accepting chemotaxis sensory transducer with Cache sensor COGs: COG0840 Methyl-accepting chemotaxis protein~InterPro IPR013163: IPR003660: IPR004089~KEGG: dhd:Dhaf_0079 methyl-accepting chemotaxis sensory transducer with cache sensor~PFAM: Chemotaxis methyl-accepting receptor%2C signalling%3B HAMP linker domain%3B Cache%2C type 2~SMART: Chemotaxis methyl-accepting receptor%2C signalling%3B HAMP linker domain~SPTR: Putative uncharacterized protein%3B~PFAM: HAMP domain%3B Cache domain%3B Methyl-accepting chemotaxis protein (MCP) signaling domain gene gene2350 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2295 Sgly_2296 Sgly_2296 Sgly_2296 2338435 2338539 - pseudogene gene2351 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2296 Sgly_2297 Sgly_2297 Sgly_2297 2338596 2338961 - UPF0102 protein yraN COGs: COG0792 endonuclease distantly related to Holliday junction resolvase~HAMAP: Uncharacterised protein family UPF0102~InterPro IPR003509~KEGG: dhd:Dhaf_3740 protein of unknown function UPF0102~PFAM: Uncharacterised protein family UPF0102~SPTR: UPF0102 protein Dhaf_3740%3B~TIGRFAM: Uncharacterised protein family UPF0102~PFAM: Uncharacterised protein family UPF0102~TIGRFAM: conserved hypothetical protein TIGR00252 gene gene2352 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2297 Sgly_2298 Sgly_2298 Sgly_2298 2338993 2339676 - RNase HII COGs: COG0164 Ribonuclease HII~InterPro IPR001352~KEGG: dhd:Dhaf_3752 ribonuclease HII~PFAM: Ribonuclease HII/HIII~PRIAM: Ribonuclease H~SPTR: Ribonuclease HII%3B~manually curated~PFAM: Ribonuclease HII gene gene2353 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2298 Sgly_2299 Sgly_2299 Sgly_2299 2339673 2340500 - Ras superfamily GTP-binding protein YlqF COGs: COG1161 GTPase~InterPro IPR002917: IPR019991~KEGG: dhd:Dhaf_3753 GTP1/OBG protein~PFAM: GTP-binding protein%2C HSR1-related~SPTR: GTP1/OBG protein%3B~TIGRFAM: GTP-binding protein%2C ribosome biogenesis%2C YlqF~PFAM: GTPase of unknown function~TIGRFAM: ribosome biogenesis GTP-binding protein YlqF gene gene2354 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2299 Sgly_2300 Sgly_2300 Sgly_2300 2340586 2340927 - LSU ribosomal protein L19P COGs: COG0335 Ribosomal protein L19~HAMAP: Ribosomal protein L19~InterPro IPR001857~KEGG: dhd:Dhaf_3755 50S ribosomal protein L19~PFAM: Ribosomal protein L19~SPTR: Predicted protein%3B~TIGRFAM: Ribosomal protein L19~PFAM: Ribosomal protein L19~TIGRFAM: ribosomal protein L19%2C bacterial type gene gene2355 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2300 Sgly_2301 Sgly_2301 Sgly_2301 2341059 2341619 - Protein of unknown function DUF2168 COGs: COG4752 conserved hypothetical protein~InterPro IPR019230~KEGG: dhd:Dhaf_3756 hypothetical protein~PFAM: Protein of unknown function DUF2168~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterized protein conserved in bacteria (DUF2168) gene gene2356 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2301 Sgly_2302 Sgly_2302 Sgly_2302 2341656 2342468 - tRNA (Guanine37-N(1)-) methyltransferase COGs: COG0336 tRNA-(guanine-N1)-methyltransferase~HAMAP: tRNA (guanine-N1-)-methyltransferase%2C bacteria~InterPro IPR016009: IPR002649~KEGG: dsy:DSY2594 tRNA (guanine-N(1)-)-methyltransferase~PFAM: tRNA (guanine-N1-)-methyltransferase~PRIAM: tRNA (guanine-N(1)-)-methyltransferase~SPTR: tRNA (guanine-N(1)-)-methyltransferase%3B~TIGRFAM: tRNA (guanine-N1-)-methyltransferase%2C bacteria~PFAM: tRNA (Guanine-1)-methyltransferase~TIGRFAM: tRNA (guanine-N1)-methyltransferase gene gene2357 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2302 Sgly_2303 Sgly_2303 Sgly_2303 2342481 2342990 - 16S rRNA processing protein RimM COGs: COG0806 RimM protein required for 16S rRNA processing~HAMAP: 16S rRNA processing protein RimM~InterPro IPR002676: IPR007903: IPR011961~KEGG: dsy:DSY2595 hypothetical protein~PFAM: RimM protein%3B PRC-barrel~SPTR: Ribosome maturation factor rimM%3B~TIGRFAM: 16S rRNA processing protein RimM~PFAM: RimM N-terminal domain~TIGRFAM: 16S rRNA processing protein RimM gene gene2358 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2303 Sgly_2304 Sgly_2304 Sgly_2304 2343074 2343304 - RNA-binding protein (KH domain) COGs: COG1837 RNA-binding protein (contains KH domain)~HAMAP: Uncharacterised protein family UPF0109%2C bacterial~InterPro IPR020627~KEGG: dhd:Dhaf_3759 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2359 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2304 Sgly_2305 Sgly_2305 Sgly_2305 2343322 2343588 - SSU ribosomal protein S16P COGs: COG0228 Ribosomal protein S16~HAMAP: Ribosomal protein S16~InterPro IPR000307~KEGG: dhd:Dhaf_3760 30S ribosomal protein S16~PFAM: Ribosomal protein S16~SPTR: 30S ribosomal protein S16%3B~TIGRFAM: Ribosomal protein S16~PFAM: Ribosomal protein S16~TIGRFAM: ribosomal protein S16 gene gene2360 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2305 Sgly_2306 Sgly_2306 Sgly_2306 2343664 2345049 - signal recognition particle subunit FFH/SRP54 (srp54) COGs: COG0541 Signal recognition particle GTPase~InterPro IPR013822: IPR000897: IPR004125: IPR003593: IPR 004780~KEGG: dhd:Dhaf_3761 signal recognition particle protein~PFAM: Signal recognition particle%2C SRP54 subunit%2C GTPase%3B Signal recognition particle%2C SRP54 subunit%2C helical bundle%3B Signal recognition particle%2C SRP54 subunit%2C M-domain~SMART: ATPase%2C AAA+ type%2C core~SPTR: Signal recognition particle protein%3B~TIGRFAM: Signal recognition particle%2C SRP~PFAM: SRP54-type protein%2C GTPase domain%3B SRP54-type protein%2C helical bundle domain%3B Signal peptide binding domain~TIGRFAM: signal recognition particle protein gene gene2361 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2306 Sgly_2307 Sgly_2307 Sgly_2307 2345107 2345472 - UPF0122 protein COGs: COG2739 conserved hypothetical protein~HAMAP: UPF0122 protein~InterPro IPR007394~KEGG: dhd:Dhaf_3762 putative helix-turn-helix protein YlxM/p13 family protein~PFAM: Putative helix-turn-helix protein%2C YlxM/p13-like~SPTR: UPF0122 protein DSY2600%3B~PFAM: Putative helix-turn-helix protein%2C YlxM / p13 like gene gene2362 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2307 Sgly_2308 Sgly_2308 Sgly_2308 2345603 2346904 - 5-methylthioadenosine/S-adenosylhomocysteine deaminase COGs: COG0402 Cytosine deaminase and related metal-dependent hydrolase~HAMAP: 5-methylthioadenosine/S-adenosylhomocysteine deaminase~InterPro IPR006680~KEGG: dsy:DSY2601 hypothetical protein~PFAM: Amidohydrolase 1~PRIAM: S-adenosylhomocysteine deaminase~SPTR: 5-methylthioadenosine/S-adenosylhomocysteine deaminase%3B~PFAM: Amidohydrolase family gene gene2363 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2308 Sgly_2309 Sgly_2309 Sgly_2309 2346950 2347984 - methylthioribose-1-phosphate isomerase COGs: COG0182 translation initiation factor 2B subunit eIF-2B alpha/beta/delta family~HAMAP: Methylthioribose-1-phosphate isomerase~InterPro IPR000649: IPR005251: IPR011559~KEGG: dhd:Dhaf_3765 translation initiation factor%2C aIF-2BI family~PFAM: Initiation factor 2B related~PRIAM: S-methyl-5-thioribose-1-phosphate isomerase~SPTR: Methylthioribose-1-phosphate isomerase%3B~TIGRFAM: Putative translation initiation factor%2C aIF-2BI/5-methylthioribose-1-phosphate isomerase%3B Initiation factor 2B alpha/beta/delta~PFAM: Initiation factor 2 subunit family~TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins%3B S-methyl-5-thioribose-1-phosphate isomerase gene gene2364 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2309 Sgly_2310 Sgly_2310 Sgly_2310 2348315 2349244 - signal recognition particle-docking protein FtsY COGs: COG0552 Signal recognition particle GTPase~InterPro IPR013822: IPR000897: IPR003593: IPR004390~KEGG: dhd:Dhaf_3767 signal recognition particle-docking protein FtsY~PFAM: Signal recognition particle%2C SRP54 subunit%2C GTPase%3B Signal recognition particle%2C SRP54 subunit%2C helical bundle~SMART: ATPase%2C AAA+ type%2C core~SPTR: Signal recognition particle-docking protein FtsY%3B~TIGRFAM: Cell division transporter substrate-binding protein FtsY~PFAM: SRP54-type protein%2C GTPase domain%3B SRP54-type protein%2C helical bundle domain~TIGRFAM: signal recognition particle-docking protein FtsY gene gene2365 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2310 Sgly_2311 Sgly_2311 Sgly_2311 2349269 2352865 - chromosome segregation protein SMC COGs: COG1196 Chromosome segregation ATPase~InterPro IPR003395: IPR010935: IPR011890~KEGG: dsy:DSY2655 hypothetical protein~PFAM: RecF/RecN/SMC protein%2C N-terminal%3B SMCs flexible hinge~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Chromosome segregation protein SMC~PFAM: RecF/RecN/SMC N terminal domain%3B SMC proteins Flexible Hinge Domain~TIGRFAM: chromosome segregation protein SMC%2C common bacterial type gene gene2366 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2311 Sgly_2312 Sgly_2312 Sgly_2312 2352862 2353641 - RNAse III COGs: COG0571 dsRNA-specific ribonuclease~HAMAP: Ribonuclease III%2C bacterial~InterPro IPR000999: IPR001159: IPR011907~KEGG: dhd:Dhaf_3813 ribonuclease III~PFAM: Ribonuclease III%3B Double-stranded RNA binding~PRIAM: Ribonuclease III~SMART: Ribonuclease III%3B Double-stranded RNA binding~SPTR: Ribonuclease III%3B~TIGRFAM: Ribonuclease III%2C bacterial~PFAM: RNase3 domain%3B Double-stranded RNA binding motif~TIGRFAM: ribonuclease III%2C bacterial gene gene2367 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2312 Sgly_2313 Sgly_2313 Sgly_2313 2353701 2353928 - Acyl carrier protein HAMAP: Acyl carrier protein (ACP)~InterPro IPR006163: IPR003231~KEGG: dhd:Dhaf_3816 acyl carrier protein~PFAM: Phosphopantetheine-binding~SPTR: Acyl carrier protein%3B~TIGRFAM: Acyl carrier protein (ACP)~PFAM: Phosphopantetheine attachment site~TIGRFAM: acyl carrier protein gene gene2368 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2313 Sgly_2314 Sgly_2314 Sgly_2314 2354044 2355057 - phosphate:acyl-(acyl carrier protein) acyltransferase COGs: COG0416 Fatty acid/phospholipid biosynthesis enzyme~HAMAP: Phospholipid biosynthesis protein%2C PlsX like~InterPro IPR003664: IPR012281~KEGG: dhd:Dhaf_3821 putative glycerol-3-phosphate acyltransferase PlsX~PFAM: Fatty acid synthesis plsX protein~SPTR: Phosphate acyltransferase%3B~TIGRFAM: Phospholipid biosynthesis protein%2C PlsX like~PFAM: Fatty acid synthesis protein~TIGRFAM: fatty acid/phospholipid synthesis protein PlsX gene gene2369 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2314 Sgly_2315 Sgly_2315 Sgly_2315 2355137 2355316 - LSU ribosomal protein L32P COGs: COG0333 Ribosomal protein L32~HAMAP: Ribosomal protein L32p~InterPro IPR002677~KEGG: dhd:Dhaf_3824 50S ribosomal protein L32~PFAM: Ribosomal protein L32p~SPTR: 50S ribosomal protein L32%3B~TIGRFAM: Ribosomal protein L32p~PFAM: Ribosomal L32p protein family~TIGRFAM: ribosomal protein L32 gene gene2370 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2315 Sgly_2316 Sgly_2316 Sgly_2316 2355320 2355835 - protein of unknown function DUF177 COGs: COG1399 metal-binding possibly nucleic acid-binding protein~InterPro IPR003772~KEGG: dhd:Dhaf_3825 protein of unknown function DUF177~PFAM: Protein of unknown function DUF177~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterized ACR%2C COG1399 gene gene2371 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2316 Sgly_2317 Sgly_2317 Sgly_2317 2355842 2357107 - acetate kinase COGs: COG0282 Acetate kinase~HAMAP: Acetate kinase~InterPro IPR000890: IPR004372~KEGG: dhd:Dhaf_3826 acetate kinase~PFAM: Acetate/butyrate kinase~PRIAM: Acetate kinase~SPTR: Acetate kinase%3B~TIGRFAM: Acetate kinase~PFAM: Acetokinase family~TIGRFAM: acetate kinase gene gene2372 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2317 Sgly_2318 Sgly_2318 Sgly_2318 2357350 2358528 + sporulation integral membrane protein YlbJ COGs: COG3314 conserved hypothetical protein~InterPro IPR011642: IPR014226~KEGG: dsy:DSY2670 hypothetical protein~PFAM: Nucleoside recognition~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Sporulation integral membrane protein YlbJ~PFAM: Nucleoside recognition~TIGRFAM: sporulation integral membrane protein YlbJ gene gene2373 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2318 Sgly_2319 Sgly_2319 Sgly_2319 2358567 2359055 - hypothetical protein KEGG: dsy:DSY2671 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2374 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2319 Sgly_2320 Sgly_2320 Sgly_2320 2359057 2359617 - methyltransferase COGs: COG0742 N6-adenine-specific methylase~InterPro IPR004398~KEGG: dhd:Dhaf_3830 methyltransferase~PFAM: Conserved hypothetical protein CHP00095~SPTR: Methyltransferase%3B~TIGRFAM: Conserved hypothetical protein CHP00095~PFAM: Conserved hypothetical protein 95~TIGRFAM: RNA methyltransferase%2C RsmD family gene gene2375 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2320 Sgly_2321 Sgly_2321 Sgly_2321 2359840 2360826 + spore protease InterPro IPR005080~KEGG: dsy:DSY2673 germination protease~PFAM: Peptidase A25%2C germination protease~PRIAM: GPR endopeptidase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Peptidase A25%2C germination protease~PFAM: Germination protease~TIGRFAM: GPR endopeptidase gene gene2376 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2321 Sgly_2322 Sgly_2322 Sgly_2322 2360831 2361634 - amidohydrolase 2 COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold~InterPro IPR006992~KEGG: tjr:TherJR_1661 amidohydrolase 2~PFAM: Amidohydrolase 2~SPTR: Putative uncharacterized protein%3B~PFAM: Amidohydrolase gene gene2377 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2322 Sgly_2323 Sgly_2323 Sgly_2323 2361839 2361958 - hypothetical protein PFAM: Small%2C acid-soluble spore proteins%2C alpha/beta type gene gene2378 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2323 Sgly_2324 Sgly_2324 Sgly_2324 2362115 2364421 - ATP-dependent DNA helicase RecG COGs: COG1200 RecG-like helicase~InterPro IPR004365: IPR011545: IPR001650: IPR014001: IPR 004609~KEGG: dhd:Dhaf_3834 ATP-dependent DNA helicase RecG~PFAM: DNA/RNA helicase%2C DEAD/DEAH box type%2C N-terminal%3B Nucleic acid binding%2C OB-fold%2C tRNA/helicase-type%3B DNA/RNA helicase%2C C-terminal~SMART: DEAD-like helicase%2C N-terminal%3B DNA/RNA helicase%2C C-terminal~SPTR: ATP-dependent DNA helicase RecG%3B~TIGRFAM: DNA helicase%2C ATP-dependent%2C RecG~PFAM: Helicase conserved C-terminal domain%3B DEAD/DEAH box helicase~TIGRFAM: ATP-dependent DNA helicase RecG gene gene2379 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2324 Sgly_2325 Sgly_2325 Sgly_2325 2364523 2365392 - L-serine ammonia-lyase COGs: COG1760 L-serine deaminase~InterPro IPR005130: IPR004642~KEGG: dsy:DSY2675 hypothetical protein~PFAM: Serine dehydratase-like%2C alpha subunit~PRIAM: L-serine ammonia-lyase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Serine dehydratase%2C alpha subunit~PFAM: Serine dehydratase alpha chain~TIGRFAM: L-serine dehydratase%2C iron-sulfur-dependent%2C alpha subunit gene gene2380 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2325 Sgly_2326 Sgly_2326 Sgly_2326 2365406 2366077 - L-serine ammonia-lyase COGs: COG1760 L-serine deaminase~InterPro IPR005131: IPR002912: IPR004643~KEGG: dhd:Dhaf_3836 L-serine dehydratase%2C iron-sulfur-dependent%2C beta subunit~PFAM: Serine dehydratase beta chain%3B Amino acid-binding ACT~PRIAM: L-serine ammonia-lyase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Iron-sulphur-dependent L-serine dehydratase beta subunit~PFAM: ACT domain%3B Serine dehydratase beta chain~TIGRFAM: L-serine dehydratase%2C iron-sulfur-dependent%2C beta subunit gene gene2381 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2326 Sgly_2327 Sgly_2327 Sgly_2327 2366244 2367938 - DAK2 domain fusion protein YloV COGs: COG1461 kinase related to dihydroxyacetone kinase~InterPro IPR004007: IPR019986~KEGG: dhd:Dhaf_3837 Dak phosphatase~PFAM: Dak phosphatase~SPTR: Dak phosphatase%3B~TIGRFAM: DAK2 domain-containing protein YloV~PFAM: DAK2 domain~TIGRFAM: DAK2 domain fusion protein YloV gene gene2382 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2327 Sgly_2328 Sgly_2328 Sgly_2328 2367980 2368336 - protein of unknown function DUF322 COGs: COG1302 conserved hypothetical protein~InterPro IPR005531~KEGG: dsy:DSY2678 hypothetical protein~PFAM: Protein of unknown function DUF322~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF322) gene gene2383 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2328 Sgly_2329 Sgly_2329 Sgly_2329 2368595 2368786 + LSU ribosomal protein L28P COGs: COG0227 Ribosomal protein L28~HAMAP: Ribosomal protein L28~InterPro IPR001383~KEGG: dhd:Dhaf_3839 50S ribosomal protein L28~PFAM: Ribosomal protein L28~SPTR: 50S ribosomal protein L28%3B~TIGRFAM: Ribosomal protein L28~PFAM: Ribosomal L28 family~TIGRFAM: ribosomal protein L28 gene gene2384 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2329 Sgly_2330 Sgly_2330 Sgly_2330 2368903 2369304 - hypothetical protein KEGG: aau:AAur_2195 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2385 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2330 Sgly_2331 Sgly_2331 Sgly_2331 2369324 2369983 - thiamine pyrophosphokinase COGs: COG1564 Thiamine pyrophosphokinase~InterPro IPR007371: IPR006282~KEGG: dhd:Dhaf_3841 thiamine pyrophosphokinase~PFAM: Thiamin pyrophosphokinase%2C catalytic domain~SPTR: Thiamine pyrophosphokinase%3B~TIGRFAM: Thiamin pyrophosphokinase~PFAM: Thiamin pyrophosphokinase%2C vitamin B1 binding domain%3B Thiamin pyrophosphokinase%2C catalytic domain~TIGRFAM: thiamine pyrophosphokinase gene gene2386 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2331 Sgly_2332 Sgly_2332 Sgly_2332 2369999 2370655 - ribulose-5-phosphate 3-epimerase COGs: COG0036 Pentose-5-phosphate-3-epimerase~InterPro IPR000056~KEGG: dhd:Dhaf_3842 ribulose-phosphate 3-epimerase~PFAM: Ribulose-phosphate 3-epimerase~PRIAM: Ribulose-phosphate 3-epimerase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Ribulose-phosphate 3-epimerase~PFAM: Ribulose-phosphate 3 epimerase family~TIGRFAM: ribulose-phosphate 3-epimerase gene gene2387 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2332 Sgly_2333 Sgly_2333 Sgly_2333 2370763 2371635 - ribosome biogenesis GTPase RsgA COGs: COG1162 GTPase~HAMAP: ribosome biogenesis GTPase RsgA~InterPro IPR004881~KEGG: dhd:Dhaf_3843 ribosome small subunit-dependent GTPase A~PFAM: GTPase EngC~SPTR: Ribosome small subunit-dependent GTPase A%3B~TIGRFAM: GTPase EngC~PFAM: Protein of unknown function%2C DUF258~TIGRFAM: ribosome small subunit-dependent GTPase A gene gene2388 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2333 Sgly_2334 Sgly_2334 Sgly_2334 2371675 2373306 - serine/threonine protein kinase with PASTA sensor(s) COGs: COG0515 Serine/threonine protein kinase~InterPro IPR017442: IPR005543: IPR020635: IPR002290~KEGG: dhd:Dhaf_3844 serine/threonine protein kinase with PASTA sensor(s)~PFAM: Serine/threonine-protein kinase-like domain%3B PASTA~PRIAM: Mitogen-activated protein kinase kinase kinase~SMART: Serine/threonine-protein kinase domain%3B Tyrosine-protein kinase%2C catalytic domain%3B PASTA~SPTR: Putative uncharacterized protein%3B~PFAM: Protein kinase domain%3B PASTA domain gene gene2389 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2334 Sgly_2335 Sgly_2335 Sgly_2335 2373307 2374725 - penicillin-binding protein transpeptidase COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2~InterPro IPR001460~KEGG: dhd:Dhaf_3845 peptidoglycan glycosyltransferase~PFAM: Penicillin-binding protein%2C transpeptidase~SPTR: Putative uncharacterized protein%3B~PFAM: Penicillin binding protein transpeptidase domain gene gene2390 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2335 Sgly_2336 Sgly_2336 Sgly_2336 2374722 2376008 - cell elongation-specific peptidoglycan biosynthesis regulator RodA COGs: COG0772 Bacterial cell division membrane protein~InterPro IPR001182~KEGG: dhd:Dhaf_3846 cell cycle protein~PFAM: Cell cycle protein~SPTR: Putative uncharacterized protein%3B~PFAM: Cell cycle protein gene gene2391 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2336 Sgly_2337 Sgly_2337 Sgly_2337 2376012 2376734 - protein serine/threonine phosphatase COGs: COG0631 Serine/threonine protein phosphatase~InterPro IPR014045: IPR001932~KEGG: dhd:Dhaf_3847 protein serine/threonine phosphatase~PFAM: Protein phosphatase 2C%2C N-terminal~SMART: Protein phosphatase 2C-related~SPTR: Putative uncharacterized protein%3B~PFAM: Protein phosphatase 2C gene gene2392 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2337 Sgly_2338 Sgly_2338 Sgly_2338 2376721 2377164 - FHA domain containing protein COGs: COG1716 FOG: FHA domain~InterPro IPR000253~KEGG: dhd:Dhaf_3848 FHA domain containing protein~PFAM: Forkhead-associated~SMART: Forkhead-associated~SPTR: Putative uncharacterized protein%3B~PFAM: FHA domain gene gene2393 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2338 Sgly_2339 Sgly_2339 Sgly_2339 2377184 2377966 - FHA domain containing protein COGs: COG1716 FOG: FHA domain~InterPro IPR000253~KEGG: dhd:Dhaf_3849 FHA domain containing protein~PFAM: Forkhead-associated~SMART: Forkhead-associated~SPTR: FHA domain containing protein%3B~PFAM: Protein of unknown function (DUF2662)%3B FHA domain gene gene2394 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2339 Sgly_2340 Sgly_2340 Sgly_2340 2377971 2379026 - 23S rRNA m(2)A-2503 methyltransferase COGs: COG0820 Fe-S-cluster redox enzyme~HAMAP: Ribosomal RNA large subunit methyltransferase RlmN%3B~InterPro IPR007197: IPR004383~KEGG: dsy:DSY2691 hypothetical protein~PFAM: Radical SAM~SPTR: Ribosomal RNA large subunit methyltransferase N%3B~TIGRFAM: Ribosomal RNA large subunit methyltransferase RlmN%3B~manually curated~PFAM: Radical SAM superfamily~TIGRFAM: radical SAM enzyme%2C Cfr family gene gene2395 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2340 Sgly_2341 Sgly_2341 Sgly_2341 2379055 2380440 - sun protein COGs: COG0144 tRNA and rRNA cytosine-C5-methylase~InterPro IPR006027: IPR001678: IPR004573: IPR011023~KEGG: dsy:DSY2692 hypothetical protein~PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p%3B NusB/RsmB/TIM44~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Fmu%2C rRNA SAM-dependent methyltransferase%3B Nop2p~PFAM: NOL1/NOP2/sun family%3B NusB family~TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB%3B NOL1/NOP2/sun family putative RNA methylase gene gene2396 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2341 Sgly_2342 Sgly_2342 Sgly_2342 2380421 2381407 - methionyl-tRNA formyltransferase COGs: COG0223 Methionyl-tRNA formyltransferase~HAMAP: Methionyl-tRNA formyltransferase~InterPro IPR002376: IPR005793: IPR005794~KEGG: dsy:DSY2693 hypothetical protein~PFAM: Formyl transferase%2C N-terminal%3B Formyl transferase%2C C-terminal~PRIAM: Methionyl-tRNA formyltransferase~SPTR: Methionyl-tRNA formyltransferase%3B~TIGRFAM: Methionyl-tRNA formyltransferase~PFAM: Formyl transferase%3B Formyl transferase%2C C-terminal domain~TIGRFAM: methionyl-tRNA formyltransferase gene gene2397 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2342 Sgly_2343 Sgly_2343 Sgly_2343 2381493 2381945 - peptide deformylase COGs: COG0242 N-formylmethionyl-tRNA deformylase~HAMAP: Formylmethionine deformylase~InterPro IPR000181~KEGG: tjr:TherJR_1797 peptide deformylase~PFAM: Formylmethionine deformylase~PRIAM: Peptide deformylase~SPTR: Peptide deformylase%3B~TIGRFAM: Formylmethionine deformylase~PFAM: Polypeptide deformylase~TIGRFAM: peptide deformylase gene gene2398 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2343 Sgly_2344 Sgly_2344 Sgly_2344 2382039 2384336 - primosomal protein N' COGs: COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase~InterPro IPR006935: IPR001650: IPR014001: IPR005259~KEGG: dhd:Dhaf_3854 primosomal protein N'~PFAM: Restriction endonuclease%2C type I%2C R subunit/Type III%2C Res subunit%3B DNA/RNA helicase%2C C-terminal~SMART: DEAD-like helicase%2C N-terminal%3B DNA/RNA helicase%2C C-terminal~SPTR: Primosomal protein N'%3B~TIGRFAM: Primosomal protein n~PFAM: Helicase conserved C-terminal domain%3B Type III restriction enzyme%2C res subunit~TIGRFAM: primosomal protein N' gene gene2399 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2344 Sgly_2345 Sgly_2345 Sgly_2345 2384609 2386534 - N-acetylmuramoyl-L-alanine amidase family 2 COGs: COG2247 Putative cell wall-binding domain~InterPro IPR007253: IPR002502~KEGG: clj:CLJU_c22330 putative cell wall-binding protein~PFAM: N-acetylmuramoyl-L-alanine amidase%2C family 2%3B Putative cell wall binding repeat 2~SMART: N-acetylmuramoyl-L-alanine amidase%2C family 2~SPTR: Predicted cell wall binding protein%3B~PFAM: Putative cell wall binding repeat 2%3B N-acetylmuramoyl-L-alanine amidase gene gene2400 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2345 Sgly_2346 Sgly_2346 Sgly_2346 2386841 2387584 - methylenetetrahydrofolate reductase COGs: COG0685 5 10-methylenetetrahydrofolate reductase~InterPro IPR003171~KEGG: hmo:HM1_1450 5%2C10-methylenetetrahydrofolate reductase~PFAM: Methylenetetrahydrofolate reductase~SPTR: Methylenetetrahydrofolate reductase%3B~PFAM: Methylenetetrahydrofolate reductase gene gene2401 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2346 Sgly_2347 Sgly_2347 Sgly_2347 2387722 2388486 + antibiotic resistance transcriptional regulator%2C MerR family COGs: COG0789 transcriptional regulator protein~InterPro IPR000551: IPR015358: IPR012925~KEGG: cbi:CLJ_B0960 transcriptional activator TipA~PFAM: TipAS antibiotic-recognition%3B HTH transcriptional regulator%2C MerR%3B Transcription regulator MerR%2C DNA binding~SMART: HTH transcriptional regulator%2C MerR~SPTR: Transcriptional activator TipA%3B~PFAM: MerR%2C DNA binding%3B MerR family regulatory protein%3B TipAS antibiotic-recognition domain gene gene2402 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2347 Sgly_2348 Sgly_2348 Sgly_2348 2388591 2389067 - hypothetical protein KEGG: chy:CHY_0609 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2403 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2348 Sgly_2349 Sgly_2349 Sgly_2349 2389303 2390583 - phosphoribosylamine--glycine ligase COGs: COG0151 Phosphoribosylamine-glycine ligase~HAMAP: Phosphoribosylglycinamide synthetase~InterPro IPR020562: IPR020561: IPR020560: IPR000115~KEGG: dhd:Dhaf_1480 phosphoribosylamine/glycine ligase~PFAM: Phosphoribosylglycinamide synthetase%2C ATP-grasp (A) domain%3B Phosphoribosylglycinamide synthetase%2C N-domain%3B Phosphoribosylglycinamide synthetase%2C C-domain~PRIAM: Phosphoribosylamine--glycine ligase~SPTR: Phosphoribosylamine/glycine ligase%3B~TIGRFAM: Phosphoribosylglycinamide synthetase~PFAM: Phosphoribosylglycinamide synthetase%2C N domain%3B Phosphoribosylglycinamide synthetase%2C ATP-grasp (A) domain%3B Phosphoribosylglycinamide synthetase%2C C domain~TIGRFAM: phosphoribosylamine--glycine ligase gene gene2404 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2349 Sgly_2350 Sgly_2350 Sgly_2350 2390733 2390816 - pseudogene gene2405 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2350 Sgly_2351 Sgly_2351 Sgly_2351 2390834 2391127 - 4Fe-4S ferredoxin iron-sulfur binding domain protein KEGG: geo:Geob_2482 4Fe-4S ferredoxin iron-sulfur binding domain protein~SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein%3B~PFAM: 4Fe-4S binding domain gene gene2406 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2351 Sgly_2352 Sgly_2352 Sgly_2352 2391143 2392201 - CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein)-like protein COGs: COG1456 CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein)~KEGG: geo:Geob_2483 CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein)-like protein~SPTR: CO dehydrogenase/acetyl-CoA synthase gamma subunit (Corrinoid Fe-S protein)-like protein%3B~PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit gene gene2407 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2352 Sgly_2353 Sgly_2353 Sgly_2353 2392198 2392515 - transcriptional regulator%2C ArsR family COGs: COG0640 transcriptional regulator protein~InterPro IPR001845~KEGG: dhd:Dhaf_3114 transcriptional regulator%2C ArsR family~PFAM: HTH transcriptional regulator%2C ArsR~SMART: HTH transcriptional regulator%2C ArsR~SPTR: Transcriptional regulator%2C ArsR family%3B~PFAM: Bacterial regulatory protein%2C arsR family gene gene2408 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2353 Sgly_2354 Sgly_2354 Sgly_2354 2392750 2394291 - IMP cyclohydrolase%3B phosphoribosylaminoimidazolecarboxamide formyltransferase COGs: COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)~HAMAP: Bifunctional purine biosynthesis protein purH~InterPro IPR011607: IPR013982: IPR002695~KEGG: dhd:Dhaf_1478 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase~PFAM: AICARFT/IMPCHase bienzyme%2C transformylase domain%3B MGS-like~PRIAM: Phosphoribosylaminoimidazolecarboxamide formyltransferase~SMART: AICARFT/IMPCHase bienzyme%2C transformylase domain~SPTR: Bifunctional purine biosynthesis protein purH%3B~TIGRFAM: AICARFT/IMPCHase bienzyme~PFAM: AICARFT/IMPCHase bienzyme%3B MGS-like domain~TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase gene gene2409 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2354 Sgly_2355 Sgly_2355 Sgly_2355 2394409 2395026 - formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase COGs: COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN~InterPro IPR002376: IPR004607~KEGG: dsy:DSY3928 hypothetical protein~PFAM: Formyl transferase%2C N-terminal~PRIAM: Phosphoribosylglycinamide formyltransferase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Phosphoribosylglycinamide formyltransferase~PFAM: Formyl transferase~TIGRFAM: phosphoribosylglycinamide formyltransferase%2C formyltetrahydrofolate-dependent gene gene2410 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2355 Sgly_2356 Sgly_2356 Sgly_2356 2395023 2396039 - phosphoribosylformylglycinamidine cyclo-ligase COGs: COG0150 Phosphoribosylaminoimidazole (AIR) synthetase~InterPro IPR000728: IPR010918: IPR004733~KEGG: dhd:Dhaf_1476 phosphoribosylaminoimidazole synthetase~PFAM: AIR synthase related protein%2C C-terminal%3B AIR synthase related protein~PRIAM: Phosphoribosylformylglycinamidine cyclo-ligase~SPTR: Phosphoribosylformylglycinamidine cyclo-ligase%3B~TIGRFAM: Phosphoribosylformylglycinamidine cyclo-ligase~PFAM: AIR synthase related protein%2C N-terminal domain%3B AIR synthase related protein%2C C-terminal domain~TIGRFAM: phosphoribosylaminoimidazole synthetase gene gene2411 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2356 Sgly_2357 Sgly_2357 Sgly_2357 2396071 2397471 - amidophosphoribosyltransferase COGs: COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase~InterPro IPR000583: IPR000836: IPR005854~KEGG: dhd:Dhaf_1475 amidophosphoribosyltransferase~PFAM: Glutamine amidotransferase%2C class-II%3B Phosphoribosyltransferase~PRIAM: Amidophosphoribosyltransferase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Amidophosphoribosyl transferase~PFAM: Phosphoribosyl transferase domain%3B Glutamine amidotransferases class-II~TIGRFAM: amidophosphoribosyltransferase gene gene2412 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2357 Sgly_2358 Sgly_2358 Sgly_2358 2397497 2399689 - phosphoribosylformylglycinamidine synthase subunit II COGs: COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase synthetase domain~HAMAP: Phosphoribosylformylglycinamidine synthase II~InterPro IPR000728: IPR010918: IPR010074~KEGG: drm:Dred_2366 phosphoribosylformylglycinamidine synthase II~PFAM: AIR synthase related protein%2C C-terminal%3B AIR synthase related protein~PRIAM: Phosphoribosylformylglycinamidine synthase~SPTR: Phosphoribosylformylglycinamidine synthase 2%3B~TIGRFAM: Phosphoribosylformylglycinamidine synthase II~PFAM: AIR synthase related protein%2C N-terminal domain%3B AIR synthase related protein%2C C-terminal domain~TIGRFAM: phosphoribosylformylglycinamidine synthase II gene gene2413 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2358 Sgly_2359 Sgly_2359 Sgly_2359 2399679 2400386 - phosphoribosylformylglycinamidine synthase subunit I COGs: COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase glutamine amidotransferase domain~HAMAP: Phosphoribosylformylglycinamidine synthase I~InterPro IPR011698: IPR010075~KEGG: lin:lin1882 phosphoribosylformylglycinamidine synthase I~PFAM: CobB/CobQ-like glutamine amidotransferase~PRIAM: Phosphoribosylformylglycinamidine synthase~SPTR: Phosphoribosylformylglycinamidine synthase 1%3B~TIGRFAM: Phosphoribosylformylglycinamidine synthase I~PFAM: CobB/CobQ-like glutamine amidotransferase domain~TIGRFAM: phosphoribosylformylglycinamidine synthase I gene gene2414 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2359 Sgly_2360 Sgly_2360 Sgly_2360 2400388 2400630 - phosphoribosylformylglycinamidine synthase%2C purS COGs: COG1828 Phosphoribosylformylglycinamidine (FGAM) synthase PurS component~InterPro IPR003850~KEGG: cts:Ctha_0209 phosphoribosylformylglycinamidine synthase%2C PurS~PFAM: Phosphoribosylformylglycinamidine synthetase%2C PurS subunit~SPTR: Phosphoribosylformylglycinamidine synthase%2C purS%3B~TIGRFAM: Phosphoribosylformylglycinamidine synthetase%2C PurS subunit~PFAM: Phosphoribosylformylglycinamidine (FGAM) synthase~TIGRFAM: phosphoribosylformylglycinamidine synthase%2C purS protein gene gene2415 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2360 Sgly_2361 Sgly_2361 Sgly_2361 2400623 2401342 - phosphoribosylaminoimidazole-succinocarboxamide synthase COGs: COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase~HAMAP: SAICAR synthetase~InterPro IPR001636~KEGG: dsy:DSY3931 phosphoribosylaminoimidazole-succinocarboxamide synthase~PFAM: SAICAR synthetase~PRIAM: Phosphoribosylaminoimidazolesuccinocarboxamide synthase~SPTR: Phosphoribosylaminoimidazole-succinocarboxamide synthase%3B~TIGRFAM: SAICAR synthetase~PFAM: SAICAR synthetase~TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase gene gene2416 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2361 Sgly_2362 Sgly_2362 Sgly_2362 2401430 2402731 - Adenylosuccinate lyase COGs: COG0015 Adenylosuccinate lyase~InterPro IPR000362: IPR019468: IPR004769~KEGG: dhd:Dhaf_1473 adenylosuccinate lyase~PFAM: Fumarate lyase%3B Adenylosuccinate lyase%2C C-terminal~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Adenylosuccinate lyase~PFAM: Lyase%3B Adenylosuccinate lyase C-terminus~TIGRFAM: adenylosuccinate lyase gene gene2417 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2362 Sgly_2363 Sgly_2363 Sgly_2363 2402745 2403248 - 5-(carboxyamino)imidazole ribonucleotide mutase COGs: COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase~InterPro IPR000031~KEGG: dhd:Dhaf_1472 phosphoribosylaminoimidazole carboxylase%2C catalytic subunit~PFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase~PFAM: AIR carboxylase~TIGRFAM: phosphoribosylaminoimidazole carboxylase%2C PurE protein gene gene2418 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2363 Sgly_2364 Sgly_2364 Sgly_2364 2403451 2404521 - metal dependent phosphohydrolase COGs: COG2206 HD-GYP domain~InterPro IPR006674: IPR003607~KEGG: dsy:DSY2161 hypothetical protein~PFAM: Metal-dependent phosphohydrolase%2C HD subdomain~SMART: Metal-dependent phosphohydrolase%2C HD domain~SPTR: Putative uncharacterized protein%3B~PFAM: HD domain~TIGRFAM: uncharacterized domain HDIG gene gene2419 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2364 Sgly_2365 Sgly_2365 Sgly_2365 2404974 2405861 - hypothetical protein KEGG: dhd:Dhaf_1151 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2420 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2365 Sgly_2366 Sgly_2366 Sgly_2366 2405993 2406484 - hypothetical protein KEGG: lpp:lpp1158 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2421 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2366 Sgly_2367 Sgly_2367 Sgly_2367 2406621 2407010 - endoribonuclease L-PSP COGs: COG0251 Putative translation initiation inhibitor yjgF family~InterPro IPR006175: IPR006056~KEGG: cth:Cthe_2798 endoribonuclease L-PSP~PFAM: Endoribonuclease L-PSP~SPTR: Endoribonuclease L-PSP%3B~TIGRFAM: YjgF-like protein~PFAM: Endoribonuclease L-PSP~TIGRFAM: endoribonuclease L-PSP%2C putative gene gene2422 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2367 Sgly_2368 Sgly_2368 Sgly_2368 2407047 2407865 - Conserved hypothetical protein CHP00268 COGs: COG1606 ATP-utilizing protein of the PP-loop superfamily~InterPro IPR011063: IPR005232~KEGG: cth:Cthe_1841 hypothetical protein~PFAM: PP-loop~SPTR: PP-loop domain protein%3B~TIGRFAM: Conserved hypothetical protein CHP00268~PFAM: Asparagine synthase~TIGRFAM: conserved hypothetical protein TIGR00268 gene gene2423 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2368 Sgly_2369 Sgly_2369 Sgly_2369 2408017 2408718 - ferredoxin KEGG: ctc:CTC01972 ferredoxin~SPTR: 4Fe-4S binding domain protein%3B~PFAM: 4Fe-4S binding domain gene gene2424 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2369 Sgly_2370 Sgly_2370 Sgly_2370 2408882 2409778 - Prephenate dehydratase COGs: COG0077 Prephenate dehydratase~InterPro IPR001086: IPR002912~KEGG: clj:CLJU_c29130 bifunctional chorismate mutase/prephenate dehydratase~PFAM: Prephenate dehydratase%3B Amino acid-binding ACT~PRIAM: Prephenate dehydratase~SPTR: Bifunctional chorismate mutase/ prephenate dehydratase%3B~PFAM: Prephenate dehydratase gene gene2425 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2370 Sgly_2371 Sgly_2371 Sgly_2371 2409780 2410880 - chorismate synthase COGs: COG0082 Chorismate synthase~InterPro IPR000453~KEGG: cac:CA_C0896 chorismate synthase~PFAM: Chorismate synthase~PRIAM: Chorismate synthase~SPTR: Chorismate synthase%3B~TIGRFAM: Chorismate synthase~PFAM: Chorismate synthase~TIGRFAM: chorismate synthase gene gene2426 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2371 Sgly_2372 Sgly_2372 Sgly_2372 2410873 2412189 - 3-phosphoshikimate 1-carboxyvinyltransferase COGs: COG0128 5-enolpyruvylshikimate-3-phosphate synthase~HAMAP: 3-phosphoshikimate 1-carboxyvinyltransferase%2C subgroup~InterPro IPR001986: IPR006264~KEGG: cno:NT01CX_0624 3-phosphoshikimate 1-carboxyvinyltransferase~PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase%2C core~PRIAM: 3-phosphoshikimate 1-carboxyvinyltransferase~SPTR: 3-phosphoshikimate 1-carboxyvinyltransferase%3B~TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase%2C subgroup~PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)~TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase gene gene2427 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2372 Sgly_2373 Sgly_2373 Sgly_2373 2412259 2413320 - 3-dehydroquinate synthase COGs: COG0337 3-dehydroquinate synthetase~HAMAP: 3-dehydroquinate synthase AroB%2C subgroup~InterPro IPR002658: IPR016037~KEGG: cno:NT01CX_0625 3-dehydroquinate synthase~PFAM: 3-dehydroquinate synthase AroB~PRIAM: 3-dehydroquinate synthase~SPTR: 3-dehydroquinate synthase%3B~TIGRFAM: 3-dehydroquinate synthase AroB%2C subgroup~PFAM: 3-dehydroquinate synthase~TIGRFAM: 3-dehydroquinate synthase gene gene2428 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2373 Sgly_2374 Sgly_2374 Sgly_2374 2413322 2414194 - Prephenate dehydrogenase COGs: COG0287 Prephenate dehydrogenase~InterPro IPR003099~KEGG: cno:NT01CX_0626 prephenate dehydrogenase~PFAM: Prephenate dehydrogenase~PRIAM: Prephenate dehydrogenase~SPTR: Prephenate dehydrogenase%3B~PFAM: Prephenate dehydrogenase gene gene2429 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2374 Sgly_2375 Sgly_2375 Sgly_2375 2414326 2415198 - 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase~InterPro IPR006218: IPR006268~KEGG: clj:CLJU_c29180 phospho-2-dehydro-3-deoxyheptonate aldolase~PFAM: DAHP synthetase I/KDSA~PRIAM: 3-deoxy-7-phosphoheptulonate synthase~SPTR: Phospho-2-dehydro-3-deoxyheptonate aldolase%3B~TIGRFAM: Phospho-2-dehydro-3-deoxyheptonate aldolase%2C subtype 2~PFAM: DAHP synthetase I family~TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase gene gene2430 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2375 Sgly_2376 Sgly_2376 Sgly_2376 2415588 2416877 - RmuC-domain protein COGs: COG1322 conserved hypothetical protein~InterPro IPR003798~KEGG: slp:Slip_1314 protein of unknown function DUF195~PFAM: RmuC~SPTR: Putative uncharacterized protein%3B~PFAM: RmuC family gene gene2431 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2376 Sgly_2377 Sgly_2377 Sgly_2377 2417106 2417792 + spore cortex-lytic enzyme COGs: COG3773 Cell wall hydrolyses involved in spore germination~InterPro IPR002477: IPR011105: IPR014224~KEGG: dhd:Dhaf_4849 spore cortex-lytic enzyme~PFAM: Cell wall hydrolase%2C SleB%3B Peptidoglycan binding-like~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Spore cortex-lytic enzyme SleB~PFAM: Putative peptidoglycan binding domain%3B Cell Wall Hydrolase~TIGRFAM: spore cortex-lytic enzyme gene gene2432 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2377 Sgly_2378 Sgly_2378 Sgly_2378 2417804 2419180 + Propeptide PepSY amd peptidase M4 InterPro IPR005075~KEGG: dhd:Dhaf_4848 propeptide PepSY amd peptidase M4~PFAM: Peptidase M4%2C propeptide%2C PepSY~SPTR: Putative uncharacterized protein%3B~TIGRFAM: germination protein YpeB gene gene2433 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2378 Sgly_2379 Sgly_2379 Sgly_2379 2419229 2420470 - natural resistance-associated macrophage protein COGs: COG1914 Mn2+ and Fe2+ transporter of the NRAMP family~InterPro IPR001046~KEGG: ttm:Tthe_2723 natural resistance-associated macrophage protein~PFAM: Natural resistance-associated macrophage protein~SPTR: Natural resistance-associated macrophage protein%3B~PFAM: Natural resistance-associated macrophage protein~TIGRFAM: NRAMP (natural resistance-associated macrophage protein) metal ion transporters gene gene2434 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2379 Sgly_2380 Sgly_2380 Sgly_2380 2420476 2421729 - MgtE intracellular region COGs: COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain)~InterPro IPR006668: IPR000644~KEGG: csc:Csac_1222 MgtE intracellular region~PFAM: Magnesium transporter%2C MgtE intracellular domain%3B Cystathionine beta-synthase%2C core~SPTR: MgtE intracellular region%3B~PFAM: MgtE intracellular N domain%3B CBS domain%3B PRC-barrel domain gene gene2435 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2380 Sgly_2381 Sgly_2381 Sgly_2381 2422117 2422656 - Rubrerythrin InterPro IPR003251~KEGG: aoe:Clos_0687 rubrerythrin~PFAM: Rubrerythrin~SPTR: Rubrerythrin%3B~PFAM: Rubrerythrin gene gene2436 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2381 Sgly_2382 Sgly_2382 Sgly_2382 2422826 2423476 - CHAP domain containing protein InterPro IPR007921~KEGG: cac:CA_C1526 amidase~PFAM: Cysteine%2C histidine-dependent amidohydrolase/peptidase~SPTR: Amidase%2C related to GSP of E.coli%3B~PFAM: CHAP domain gene gene2437 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2382 Sgly_2383 Sgly_2383 Sgly_2383 2423664 2423855 - hypothetical protein COGs: COG4877 conserved hypothetical protein~KEGG: oih:OB0884 hypothetical protein~SPTR: Hypothetical conserved protein gene gene2438 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2383 Sgly_2384 Sgly_2384 Sgly_2384 2423870 2424721 - band 7 protein COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs~InterPro IPR001107~KEGG: dae:Dtox_2916 band 7 protein~PFAM: Band 7 protein~SMART: Band 7 protein~SPTR: Band 7 protein%3B~PFAM: SPFH domain / Band 7 family gene gene2439 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2384 Sgly_2385 Sgly_2385 Sgly_2385 2425111 2425920 + phosphomethylpyrimidine kinase COGs: COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase~InterPro IPR013749: IPR004399~KEGG: aoe:Clos_2695 phosphomethylpyrimidine kinase~PFAM: Phosphomethylpyrimidine kinase type-1~PRIAM: Phosphomethylpyrimidine kinase~SPTR: Phosphomethylpyrimidine kinase%3B~TIGRFAM: Phosphomethylpyrimidine kinase type-2~PFAM: Phosphomethylpyrimidine kinase~TIGRFAM: phosphomethylpyrimidine kinase gene gene2440 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2385 Sgly_2386 Sgly_2386 Sgly_2386 2425910 2427121 + hydroxymethylpyrimidine transporter CytX COGs: COG1457 Purine-cytosine permease and related protein~InterPro IPR001248: IPR012732~KEGG: cbk:CLL_A1800 probable hydroxymethylpyrimidine transporter CytX~PFAM: Permease%2C cytosine/purines%2C uracil%2C thiamine%2C allantoin~SPTR: Putative hydroxymethylpyrimidine transporter CytX%3B~TIGRFAM: Hydroxymethylpyrimidine transporter CytX~PFAM: Permease for cytosine/purines%2C uracil%2C thiamine%2C allantoin~TIGRFAM: NCS1 nucleoside transporter family%3B probable hydroxymethylpyrimidine transporter CytX gene gene2441 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2386 Sgly_2387 Sgly_2387 Sgly_2387 2427156 2427968 + hydroxyethylthiazole kinase COGs: COG2145 Hydroxyethylthiazole kinase sugar kinase family~HAMAP: Hydroxyethylthiazole kinase~InterPro IPR000417~KEGG: cbe:Cbei_4488 hydroxyethylthiazole kinase~PFAM: Hydroxyethylthiazole kinase~PRIAM: Hydroxyethylthiazole kinase~SPTR: Hydroxyethylthiazole kinase%3B~TIGRFAM: hydroxyethylthiazole kinase~PFAM: Hydroxyethylthiazole kinase family~TIGRFAM: hydroxyethylthiazole kinase gene gene2442 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2387 Sgly_2388 Sgly_2388 Sgly_2388 2427961 2428584 + thiamine-phosphate diphosphorylase COGs: COG0352 Thiamine monophosphate synthase~HAMAP: Thiamine monophosphate synthase~InterPro IPR003733~KEGG: aoe:Clos_2693 thiamine-phosphate pyrophosphorylase~PFAM: Thiamine monophosphate synthase~SPTR: Thiamine-phosphate pyrophosphorylase%3B~TIGRFAM: Thiamine monophosphate synthase~PFAM: Thiamine monophosphate synthase/TENI~TIGRFAM: thiamine-phosphate pyrophosphorylase gene gene2443 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2388 Sgly_2389 Sgly_2389 Sgly_2389 2428612 2429325 + 1-acyl-sn-glycerol-3-phosphate acyltransferase COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase~InterPro IPR002123: IPR004552~KEGG: cbt:CLH_3257 1-acyl-sn-glycerol-3-phosphate acyltransferase~PFAM: Phospholipid/glycerol acyltransferase~SMART: Phospholipid/glycerol acyltransferase~SPTR: 1-acyl-sn-glycerol-3-phosphate acyltransferase%3B~TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase~PFAM: Acyltransferase~TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases gene gene2444 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2389 Sgly_2390 Sgly_2390 Sgly_2390 2429617 2431842 + formate acetyltransferase COGs: COG1882 Pyruvate-formate lyase~InterPro IPR004184: IPR001150: IPR005949~KEGG: hor:Hore_23170 formate acetyltransferase~PFAM: Pyruvate formate-lyase%2C PFL%3B Formate C-acetyltransferase glycine radical~PRIAM: Formate C-acetyltransferase~SPTR: Formate acetyltransferase%3B~TIGRFAM: Formate acetyltransferase~PFAM: Glycine radical%3B Pyruvate formate lyase~TIGRFAM: formate acetyltransferase 1 gene gene2445 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2390 Sgly_2391 Sgly_2391 Sgly_2391 2431883 2432629 + pyruvate formate-lyase activating enzyme COGs: COG1180 Pyruvate-formate lyase-activating enzyme~InterPro IPR007197: IPR012838~KEGG: hor:Hore_23160 pyruvate formate-lyase activating enzyme~PFAM: Radical SAM~PRIAM: [Formate-C-acetyltransferase]-activating enzyme~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Pyruvate formate-lyase activating~PFAM: Radical SAM superfamily~TIGRFAM: pyruvate formate-lyase 1-activating enzyme%3B glycyl-radical enzyme activating protein family gene gene2446 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2391 Sgly_2392 Sgly_2392 Sgly_2392 2432649 2433740 - spore germination protein InterPro IPR004761~KEGG: cob:COB47_2331 spore germination protein~PFAM: Spore germination GerAB~SPTR: Spore germination protein%3B~TIGRFAM: Spore germination GerAB~PFAM: Spore germination protein~TIGRFAM: spore germination protein (amino acid permease) gene gene2447 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2392 Sgly_2393 Sgly_2393 Sgly_2393 2433733 2435079 - germination protein%2C Ger(x)C family InterPro IPR008844~KEGG: aar:Acear_2081 germination protein%2C Ger(X)C family~PFAM: Spore germination GerAC~SPTR: Germination protein%2C Ger(X)C family%3B~TIGRFAM: Spore germination GerAC~PFAM: Spore germination B3/ GerAC like%2C C-terminal~TIGRFAM: germination protein%2C Ger(x)C family gene gene2448 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2393 Sgly_2394 Sgly_2394 Sgly_2394 2435143 2436726 - GerA spore germination protein InterPro IPR004995~KEGG: cac:CA_P0020 spore germination protein%2C GrkA~PFAM: Bacillus/Clostridium GerA spore germination protein~SPTR: Spore germination protein%2C GRKA%3B~PFAM: Bacillus/Clostridium GerA spore germination protein gene gene2449 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2394 Sgly_2395 Sgly_2395 Sgly_2395 2436851 2436958 + hypothetical protein KEGG: dhd:Dhaf_3614 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2450 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2395 Sgly_2396 Sgly_2396 Sgly_2396 2437301 2438527 - LL-diaminopimelate aminotransferase apoenzyme COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase~HAMAP: LL-diaminopimelate aminotransferase~InterPro IPR004839: IPR019942~KEGG: dae:Dtox_2324 L%2CL-diaminopimelate aminotransferase~PFAM: Aminotransferase%2C class I/II~PRIAM: LL-diaminopimelate aminotransferase~SPTR: Aminotransferase class I and II%3B~TIGRFAM: LL-diaminopimelate aminotransferase%2C plant-related~PFAM: Aminotransferase class I and II~TIGRFAM: LL-diaminopimelate aminotransferase gene gene2451 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2396 Sgly_2397 Sgly_2397 Sgly_2397 2438622 2439872 - dolichyl-phosphate-mannose-protein mannosyltransferase family protein COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family~KEGG: cpr:CPR_0954 dolichyl-phosphate-mannose-protein mannosyltransferase family protein~SPTR: Dolichyl-phosphate-mannose-protein mannosyltransferase family protein%3B~PFAM: Alg9-like mannosyltransferase family gene gene2452 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2397 Sgly_2398 Sgly_2398 Sgly_2398 2440766 2441920 - NGG1p interacting factor 3 protein%2C NIF3 COGs: COG3323 conserved hypothetical protein~InterPro IPR002678~KEGG: dhd:Dhaf_4214 protein of unknown function DUF34~PFAM: NGG1p interacting factor 3%2C NIF3~SPTR: Putative uncharacterized protein%3B~TIGRFAM: NGG1p interacting factor 3%2C NIF3~PFAM: NIF3 (NGG1p interacting factor 3)~TIGRFAM: dinuclear metal center protein%2C YbgI/SA1388 family gene gene2454 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2398 Sgly_2399 Sgly_2399 Sgly_2399 2441899 2442732 - protein of unknown function DUF633 COGs: COG2384 SAM-dependent methyltransferase~InterPro IPR006901~KEGG: dsy:DSY3046 hypothetical protein~PFAM: Protein of unknown function DUF633~SPTR: Putative uncharacterized protein%3B~PFAM: Family of unknown function (DUF633) gene gene2455 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2399 Sgly_2400 Sgly_2400 Sgly_2400 2443223 2443315 - hypothetical protein gene gene2458 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2400 Sgly_2401 Sgly_2401 Sgly_2401 2443612 2444790 - RNA polymerase%2C sigma 70 subunit%2C RpoD subfamily COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)~InterPro IPR007127: IPR009042: IPR007627: IPR007624: IPR 007630: IPR014284: IPR012760~KEGG: dhd:Dhaf_4216 RNA polymerase sigma factor RpoD~PFAM: RNA polymerase sigma-70 region 3%3B RNA polymerase sigma-70 region 2%3B RNA polymerase sigma-70 region 1.2%3B RNA polymerase sigma factor 70%2C region 1.1%3B RNA polymerase sigma-70 region 4~SPTR: RNA polymerase sigma factor%3B~TIGRFAM: RNA polymerase sigma factor RpoD%2C C-terminal%3B RNA polymerase sigma-70~PFAM: Sigma-70%2C region 4%3B Sigma-70 factor%2C region 1.1%3B Sigma-70 region 3%3B Sigma-70 region 2%3B Sigma-70 factor%2C region 1.2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family%3B RNA polymerase sigma factor RpoD%2C C-terminal domain gene gene2459 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2401 Sgly_2402 Sgly_2402 Sgly_2402 2444777 2446609 - DNA primase COGs: COG0358 DNA primase~InterPro IPR002694: IPR013264: IPR006171: IPR019475: IPR 006154: IPR006295~KEGG: dhd:Dhaf_4217 DNA primase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: DNA primase%2C DnaG~PFAM: Toprim domain%3B DNA primase catalytic core%2C N-terminal domain%3B CHC2 zinc finger%3B DnaB-helicase binding domain of primase~TIGRFAM: DNA primase%2C catalytic core gene gene2460 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2402 Sgly_2403 Sgly_2403 Sgly_2403 2446750 2447745 - deoxyguanosinetriphosphate triphosphohydrolase COGs: COG0232 dGTP triphosphohydrolase~InterPro IPR006674: IPR003607: IPR006261~KEGG: dsy:DSY3050 deoxyguanosinetriphosphate triphosphohydrolase-like protein~PFAM: Metal-dependent phosphohydrolase%2C HD subdomain~SMART: Metal-dependent phosphohydrolase%2C HD domain~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Deoxyguanosinetriphosphate triphosphohydrolase~PFAM: HD domain~TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase%2C putative gene gene2461 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2403 Sgly_2404 Sgly_2404 Sgly_2404 2447981 2448301 - small multidrug resistance protein COGs: COG2076 Membrane transporter of cations and cationic drugs~InterPro IPR000390~KEGG: ckr:CKR_2177 hypothetical protein~PFAM: Small multidrug resistance protein~SPTR: Putative uncharacterized protein%3B~PFAM: Small Multidrug Resistance protein gene gene2462 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2404 Sgly_2405 Sgly_2405 Sgly_2405 2448702 2449118 + GreA/GreB family elongation factor COGs: COG0782 Transcription elongation factor~InterPro IPR001437~KEGG: dhd:Dhaf_4883 GreA/GreB family elongation factor~PFAM: Transcription elongation factor%2C GreA/GreB domain%2C prokaryotic~SPTR: Putative uncharacterized protein%3B~PFAM: Transcription elongation factor%2C GreA/GreB%2C C-term gene gene2463 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2405 Sgly_2406 Sgly_2406 Sgly_2406 2449170 2449646 - transcription activator effector binding protein COGs: COG3449 DNA gyrase inhibitor~InterPro IPR010499~KEGG: cby:CLM_0797 DNA gyrase inhibitory protein%2C GyrI~PFAM: Bacterial transcription activator%2C effector binding~SPTR: DNA gyrase inhibitory protein%2C GyrI%3B~PFAM: Bacterial transcription activator%2C effector binding domain gene gene2464 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2406 Sgly_2407 Sgly_2407 Sgly_2407 2449896 2450111 - hypothetical protein KEGG: ttm:Tthe_1878 protein of unknown function UPF0150~SPTR: Putative uncharacterized protein%3B~PFAM: HicB family gene gene2465 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2407 Sgly_2408 Sgly_2408 Sgly_2408 2450170 2450570 - pseudogene gene2466 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2408 Sgly_2409 Sgly_2409 Sgly_2409 2450554 2450829 - transcriptional regulator%2C AbrB family InterPro IPR007159: IPR006339~KEGG: swo:Swol_1976 regulators of stationary/sporulation gene expression~PFAM: Transcription regulator AbrB/SpoV%2C predicted~SPTR: Regulators of stationary/sporulation gene expression%3B~TIGRFAM: Transcription regulator AbrB~PFAM: SpoVT / AbrB like domain~TIGRFAM: looped-hinge helix DNA binding domain%2C AbrB family gene gene2467 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2409 Sgly_2410 Sgly_2410 Sgly_2410 2451335 2451652 - pseudogene gene2468 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2410 Sgly_2411 Sgly_2411 Sgly_2411 2451649 2451954 - addiction module antitoxin%2C RelB/DinJ family InterPro IPR007337~KEGG: sak:SAK_0743 prophage LambdaSa04%2C RelB antitoxin family protein~PFAM: RelB antitoxin~SPTR: Putative uncharacterized protein%3B~TIGRFAM: RelB antitoxin~PFAM: RelB antitoxin~TIGRFAM: addiction module antitoxin%2C RelB/DinJ family gene gene2469 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2411 Sgly_2412 Sgly_2412 Sgly_2412 2452216 2452872 - addiction module toxin%2C RelE/StbE family COGs: COG3041 conserved hypothetical protein~InterPro IPR012753~KEGG: dhd:Dhaf_2525 hypothetical protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Addiction module toxin%2C RelE/StbE~TIGRFAM: addiction module toxin component%2C YafQ family%3B addiction module toxin%2C RelE/StbE family gene gene2470 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2412 Sgly_2413 Sgly_2413 Sgly_2413 2452859 2453149 - addiction module antitoxin%2C RelB/DinJ family COGs: COG3077 DNA-damage-inducible protein J~InterPro IPR007337~KEGG: clo:HMPREF0868_0245 putative toxin-antitoxin system%2C antitoxin component%2C ribbon-helix-helix domain protein~PFAM: RelB antitoxin~SPTR: Toxin-antitoxin system%2C antitoxin component%2C ribbon-helix-helix fold protein%3B~TIGRFAM: RelB antitoxin~PFAM: RelB antitoxin~TIGRFAM: addiction module antitoxin%2C RelB/DinJ family gene gene2471 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2413 Sgly_2414 Sgly_2414 Sgly_2414 2453569 2456241 - pyruvate phosphate dikinase COGs: COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase~InterPro IPR002192: IPR008279: IPR000121: IPR010121~KEGG: dhd:Dhaf_4251 pyruvate phosphate dikinase~PFAM: Pyruvate phosphate dikinase%2C PEP/pyruvate-binding%3B PEP-utilising enzyme%2C mobile domain%3B PEP-utilising enzyme~PRIAM: Pyruvate%2C phosphate dikinase~SPTR: Pyruvate%2C phosphate dikinase%3B~TIGRFAM: Pyruvate%2C phosphate dikinase~PFAM: PEP-utilising enzyme%2C mobile domain%3B PEP-utilising enzyme%2C TIM barrel domain%3B Pyruvate phosphate dikinase%2C PEP/pyruvate binding domain~TIGRFAM: pyruvate%2C phosphate dikinase gene gene2472 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2414 Sgly_2415 Sgly_2415 Sgly_2415 2456244 2457056 - phosphotransferase ydiA COGs: COG1806 conserved hypothetical protein~HAMAP: Protein of unknown function DUF299%2C phosphotransferase%2C predicted~InterPro IPR005177~KEGG: dhd:Dhaf_4252 hypothetical protein~PFAM: Protein of unknown function DUF299%2C phosphotransferase%2C predicted~SPTR: Putative phosphotransferase Dhaf_4252%3B~PFAM: Domain of unknown function (DUF299) gene gene2473 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2415 Sgly_2416 Sgly_2416 Sgly_2416 2457103 2457735 - CBS domain containing protein InterPro IPR000644~KEGG: dhd:Dhaf_4253 helix-turn-helix type 11 domain protein~PFAM: Cystathionine beta-synthase%2C core~SMART: Cystathionine beta-synthase%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: HTH domain%3B CBS domain gene gene2474 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2416 Sgly_2417 Sgly_2417 Sgly_2417 2458010 2460082 - glycyl-tRNA synthetase beta chain COGs: COG0751 Glycyl-tRNA synthetase beta subunit~HAMAP: Glycyl-tRNA synthetase%2C class IIc%2C beta subunit~InterPro IPR002311: IPR008909: IPR015944~KEGG: dhd:Dhaf_4254 glycyl-tRNA synthetase%2C beta subunit~PFAM: Glycyl-tRNA synthetase%2C class IIc%2C beta subunit%2C N-terminal%3B DALR anticodon binding~PRIAM: Glycine--tRNA ligase~SPTR: Glycyl-tRNA synthetase beta subunit%3B~TIGRFAM: Glycyl-tRNA synthetase%2C class IIc%2C beta subunit~PFAM: Glycyl-tRNA synthetase beta subunit%3B DALR anticodon binding domain~TIGRFAM: glycyl-tRNA synthetase%2C tetrameric type%2C beta subunit gene gene2475 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2417 Sgly_2418 Sgly_2418 Sgly_2418 2460087 2460968 - glycyl-tRNA synthetase alpha chain COGs: COG0752 Glycyl-tRNA synthetase alpha subunit~HAMAP: Glycyl-tRNA synthetase%2C class IIc%2C alpha subunit~InterPro IPR002310~KEGG: dhd:Dhaf_4255 glycyl-tRNA synthetase subunit alpha~PFAM: Glycyl-tRNA synthetase%2C class IIc%2C alpha subunit~PRIAM: Glycine--tRNA ligase~SPTR: Glycyl-tRNA synthetase alpha subunit%3B~TIGRFAM: Glycyl-tRNA synthetase%2C class IIc%2C alpha subunit~PFAM: Glycyl-tRNA synthetase alpha subunit~TIGRFAM: glycyl-tRNA synthetase%2C tetrameric type%2C alpha subunit gene gene2476 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2418 Sgly_2419 Sgly_2419 Sgly_2419 2461299 2462042 - DNA replication and repair protein RecO COGs: COG1381 Recombinational DNA repair protein (RecF pathway)~HAMAP: DNA repair protein recO~InterPro IPR003717~KEGG: dsy:DSY3103 hypothetical protein~PFAM: Recombination protein O%2C RecO~SPTR: DNA repair protein recO%3B~TIGRFAM: Recombination protein O%2C RecO~PFAM: Recombination protein O C terminal%3B Recombination protein O N terminal~TIGRFAM: DNA repair protein RecO gene gene2477 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2419 Sgly_2420 Sgly_2420 Sgly_2420 2462064 2462714 - Deoxyribose-phosphate aldolase COGs: COG0274 Deoxyribose-phosphate aldolase~HAMAP: Deoxyribose-phosphate aldolase~InterPro IPR002915: IPR011343~KEGG: dhd:Dhaf_4274 deoxyribose-phosphate aldolase~PFAM: Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase~PRIAM: Deoxyribose-phosphate aldolase~SPTR: Deoxyribose-phosphate aldolase%3B~TIGRFAM: Deoxyribose-phosphate aldolase~PFAM: DeoC/LacD family aldolase~TIGRFAM: deoxyribose-phosphate aldolase gene gene2478 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2420 Sgly_2421 Sgly_2421 Sgly_2421 2462778 2463695 - GTP-binding protein Era-like-protein COGs: COG1159 GTPase~HAMAP: GTP-binding protein Era~InterPro IPR002917: IPR004044: IPR005225: IPR005662~KEGG: dsy:DSY3105 hypothetical protein~PFAM: GTP-binding protein%2C HSR1-related%3B K Homology%2C type 2~SPTR: GTP-binding protein era homolog%3B~TIGRFAM: GTP-binding protein Era%3B Small GTP-binding protein~PFAM: KH domain%3B GTPase of unknown function~TIGRFAM: GTP-binding protein Era%3B small GTP-binding protein domain gene gene2479 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2421 Sgly_2422 Sgly_2422 Sgly_2422 2463701 2464114 - cytidine deaminase COGs: COG0295 Cytidine deaminase~InterPro IPR002125: IPR006262~KEGG: dhd:Dhaf_4276 cytidine deaminase~PFAM: CMP/dCMP deaminase%2C zinc-binding~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Cytidine deaminase%2C homotetrameric~PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region~TIGRFAM: cytidine deaminase%2C homotetrameric gene gene2480 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2422 Sgly_2423 Sgly_2423 Sgly_2423 2464119 2464517 - diacylglycerol kinase COGs: COG0818 Diacylglycerol kinase~InterPro IPR000829~KEGG: lsg:lse_1381 hypothetical protein~PFAM: Diacylglycerol kinase%2C prokaryotic~SPTR: DgkA protein%3B~PFAM: Prokaryotic diacylglycerol kinase gene gene2481 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2423 Sgly_2424 Sgly_2424 Sgly_2424 2464528 2465034 - metalloprotease ybeY COGs: COG0319 metal-dependent hydrolase~HAMAP: Uncharacterised protein family UPF0054~InterPro IPR002036~KEGG: dhd:Dhaf_4278 protein of unknown function UPF0054~PFAM: Uncharacterised protein family UPF0054~SPTR: Putative metalloprotease Dhaf_4278%3B~TIGRFAM: Uncharacterised protein family UPF0054~PFAM: Uncharacterized protein family UPF0054~TIGRFAM: metalloprotein%2C YbeY/UPF0054 family gene gene2482 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2424 Sgly_2425 Sgly_2425 Sgly_2425 2465024 2467366 - metal dependent phosphohydrolase COGs: COG1480 membrane-associated HD superfamily hydrolase~InterPro IPR011621: IPR006674: IPR003607: IPR006675~KEGG: dsy:DSY3110 hypothetical protein~PFAM: Metal-dependent phosphohydrolase%2C 7TM intracellular domain%3B Metal-dependent phosphohydrolase%2C HD subdomain~SMART: Metal-dependent phosphohydrolase%2C HD domain~SPTR: Putative uncharacterized protein%3B~TIGRFAM: HDIG~PFAM: 7TM-HD extracellular%3B HD domain%3B 7TM receptor with intracellular HD hydrolase~TIGRFAM: uncharacterized domain HDIG gene gene2483 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2425 Sgly_2426 Sgly_2426 Sgly_2426 2467408 2468388 - PhoH family protein COGs: COG1702 Phosphate starvation-inducible protein PhoH predicted ATPase~InterPro IPR003714~KEGG: dhd:Dhaf_4280 PhoH family protein~PFAM: PhoH-like protein~SPTR: Putative uncharacterized protein%3B~PFAM: PhoH-like protein gene gene2484 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2426 Sgly_2427 Sgly_2427 Sgly_2427 2468411 2469613 - sporulation protein YqfD InterPro IPR010690~KEGG: dhd:Dhaf_4281 sporulation protein YqfD~PFAM: Putative stage IV sporulation YqfD~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Putative stage IV sporulation YqfD~PFAM: Putative stage IV sporulation protein YqfD~TIGRFAM: sporulation protein YqfD gene gene2485 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2427 Sgly_2428 Sgly_2428 Sgly_2428 2469614 2469892 - sporulation protein YqfC KEGG: dhd:Dhaf_4282 sporulation protein YqfC~SPTR: Sporulation protein YqfC%3B~PFAM: YabP family~TIGRFAM: sporulation protein YqfC gene gene2486 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2428 Sgly_2429 Sgly_2429 Sgly_2429 2470063 2470512 - GatB/YqeY domain-containing protein COGs: COG1610 conserved hypothetical protein~InterPro IPR019004~KEGG: dhd:Dhaf_4291 GatB/YqeY domain-containing protein~SPTR: Putative uncharacterized protein%3B~PFAM: Yqey-like protein gene gene2487 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2429 Sgly_2430 Sgly_2430 Sgly_2430 2470528 2470704 - SSU ribosomal protein S21P HAMAP: Ribosomal protein S21~InterPro IPR001911~KEGG: dhd:Dhaf_4292 30S ribosomal protein S21~PFAM: Ribosomal protein S21~SPTR: 30S ribosomal protein S21%3B~TIGRFAM: Ribosomal protein S21~PFAM: Ribosomal protein S21~TIGRFAM: ribosomal protein S21 gene gene2488 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2430 Sgly_2431 Sgly_2431 Sgly_2431 2470810 2471154 - histidine triad (HIT) protein COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase~InterPro IPR001310~KEGG: dhd:Dhaf_4293 histidine triad (HIT) protein~PFAM: Histidine triad (HIT) protein~SPTR: Putative uncharacterized protein%3B~PFAM: HIT domain gene gene2489 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2431 Sgly_2432 Sgly_2432 Sgly_2432 2471200 2472054 - hypothetical protein KEGG: mxa:MXAN_0668 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2490 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2432 Sgly_2433 Sgly_2433 Sgly_2433 2472146 2473540 - RNA modification enzyme%2C MiaB family COGs: COG0621 2-methylthioadenine synthetase~InterPro IPR013848: IPR007197: IPR006638: IPR005839: IPR 006467~KEGG: dhd:Dhaf_4295 RNA modification enzyme%2C MiaB family~PFAM: Methylthiotransferase%2C N-terminal%3B Radical SAM~SMART: Elongator protein 3/MiaB/NifB~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Methylthiotransferase%3B MiaB-like tRNA modifying enzyme~PFAM: Radical SAM superfamily%3B Uncharacterized protein family UPF0004~TIGRFAM: MiaB-like tRNA modifying enzyme%3B RNA modification enzyme%2C MiaB family gene gene2491 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2433 Sgly_2434 Sgly_2434 Sgly_2434 2473537 2474274 - Ribosomal RNA small subunit methyltransferase E COGs: COG1385 conserved hypothetical protein~InterPro IPR006700~KEGG: dhd:Dhaf_4296 protein of unknown function DUF558~PFAM: Ribosomal RNA small subunit methyltransferase E~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Ribosomal RNA small subunit methyltransferase E~PFAM: RNA methyltransferase~TIGRFAM: RNA methyltransferase%2C RsmE family gene gene2492 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2434 Sgly_2435 Sgly_2435 Sgly_2435 2474267 2475205 - (LSU ribosomal protein L11P)-lysine N-methyltransferase COGs: COG2264 Ribosomal protein L11 methylase~HAMAP: Ribosomal protein L11 methyltransferase~InterPro IPR010456: IPR004498~KEGG: dsy:DSY3128 ribosomal protein L11 methyltransferase~PFAM: Ribosomal L11 methyltransferase~SPTR: Ribosomal protein L11 methyltransferase%3B~TIGRFAM: Ribosomal protein L11 methyltransferase~PFAM: Ribosomal protein L11 methyltransferase (PrmA)~TIGRFAM: ribosomal protein L11 methyltransferase gene gene2493 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2435 Sgly_2436 Sgly_2436 Sgly_2436 2475260 2476402 - Chaperone protein dnaJ COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain~HAMAP: Chaperone DnaJ~InterPro IPR001623: IPR001305: IPR002939: IPR012724~KEGG: dhd:Dhaf_4298 chaperone protein DnaJ~PFAM: Chaperone DnaJ%2C C-terminal%3B Heat shock protein DnaJ%2C N-terminal%3B Heat shock protein DnaJ%2C cysteine-rich domain~SMART: Heat shock protein DnaJ%2C N-terminal~SPTR: Chaperone protein dnaJ%3B~TIGRFAM: Chaperone DnaJ~PFAM: DnaJ C terminal region%3B DnaJ central domain (4 repeats)%3B DnaJ domain~TIGRFAM: chaperone protein DnaJ gene gene2494 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2436 Sgly_2437 Sgly_2437 Sgly_2437 2476574 2478436 - Chaperone protein dnaK COGs: COG0443 Molecular chaperone~HAMAP: Chaperone DnaK~InterPro IPR013126: IPR012725~KEGG: dhd:Dhaf_4299 chaperone protein DnaK~PFAM: Heat shock protein 70~SPTR: Chaperone protein dnaK%3B~TIGRFAM: Chaperone DnaK~PFAM: Hsp70 protein~TIGRFAM: chaperone protein DnaK gene gene2495 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2437 Sgly_2438 Sgly_2438 Sgly_2438 2478520 2479053 - Protein grpE COGs: COG0576 Molecular chaperone GrpE (heat shock protein)~HAMAP: GrpE nucleotide exchange factor~InterPro IPR000740~KEGG: dhd:Dhaf_4300 GrpE protein~PFAM: GrpE nucleotide exchange factor~SPTR: Protein grpE%3B~PFAM: GrpE gene gene2496 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2438 Sgly_2439 Sgly_2439 Sgly_2439 2479084 2480121 - heat-inducible transcription repressor HrcA COGs: COG1420 Transcriptional regulator of heat shock gene~HAMAP: Winged helix-turn-helix transcription repressor%2C HrcA~InterPro IPR021153: IPR002571~KEGG: dhd:Dhaf_4301 heat-inducible transcription repressor HrcA~PFAM: Winged helix-turn-helix transcription repressor%2C HrcA%2C C-terminal~SPTR: Heat-inducible transcription repressor hrcA%3B~TIGRFAM: Winged helix-turn-helix transcription repressor%2C HrcA~PFAM: HrcA protein C terminal domain~TIGRFAM: heat shock gene repressor HrcA gene gene2497 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2439 Sgly_2440 Sgly_2440 Sgly_2440 2480223 2481404 - oxygen-independent coproporphyrinogen III oxidase COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase~InterPro IPR007197: IPR010723: IPR006638: IPR004559~KEGG: dhd:Dhaf_4306 oxygen-independent coproporphyrinogen III oxidase~PFAM: Radical SAM%3B HemN%2C C-terminal~SMART: Elongator protein 3/MiaB/NifB~SPTR: Oxygen-independent coproporphyrinogen III oxidase%3B~TIGRFAM: Putative oxygen-independent coproporphyrinogen III oxidase~PFAM: Radical SAM superfamily%3B HemN C-terminal region~TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase gene gene2498 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2440 Sgly_2441 Sgly_2441 Sgly_2441 2481434 2483239 - GTP-binding protein LepA COGs: COG0481 Membrane GTPase LepA~HAMAP: GTP-binding protein LepA~InterPro IPR000795: IPR004161: IPR000640: IPR013842: IPR 005225: IPR006297~KEGG: dhd:Dhaf_4307 GTP-binding protein LepA~PFAM: GTP-binding protein LepA%2C C-terminal%3B Protein synthesis factor%2C GTP-binding%3B Translation elongation factor EFTu/EF1A%2C domain 2%3B Translation elongation factor EFG/EF2%2C C-terminal~SPTR: GTP-binding protein lepA%3B~TIGRFAM: GTP-binding protein LepA%3B Small GTP-binding protein~PFAM: Elongation factor Tu domain 2%3B Elongation factor G C-terminus%3B Elongation factor Tu GTP binding domain%3B GTP-binding protein LepA C-terminus~TIGRFAM: GTP-binding protein LepA%3B small GTP-binding protein domain gene gene2499 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2441 Sgly_2442 Sgly_2442 Sgly_2442 2483405 2484988 - integral membrane protein MviN COGs: COG0728 membrane protein putative virulence factor~InterPro IPR004268~KEGG: dhd:Dhaf_4312 integral membrane protein MviN~PFAM: Flagellin assembly%2C membrane protein MviN~SPTR: Integral membrane protein MviN%3B~TIGRFAM: Flagellin assembly%2C membrane protein MviN~PFAM: MviN-like protein~TIGRFAM: integral membrane protein MviN gene gene2500 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2442 Sgly_2443 Sgly_2443 Sgly_2443 2485029 2486045 - stage II sporulation protein P InterPro IPR010897~KEGG: dhd:Dhaf_4313 stage II sporulation protein P~PFAM: Sporulation stage II%2C protein P~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Sporulation stage II%2C protein P~PFAM: Stage II sporulation protein P (SpoIIP)~TIGRFAM: stage II sporulation protein P gene gene2501 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2443 Sgly_2444 Sgly_2444 Sgly_2444 2486194 2486472 + SSU ribosomal protein S20P HAMAP: Ribosomal protein S20~InterPro IPR002583~KEGG: dhd:Dhaf_4315 30S ribosomal protein S20~PFAM: Ribosomal protein S20~SPTR: 30S ribosomal protein S20%3B~TIGRFAM: Ribosomal protein S20~PFAM: Ribosomal protein S20~TIGRFAM: ribosomal protein S20 gene gene2502 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2444 Sgly_2445 Sgly_2445 Sgly_2445 2486597 2487388 - ADP-ribosylation/Crystallin J1 COGs: COG1397 ADP-ribosylglycohydrolase~InterPro IPR005502~KEGG: hmo:HM1_2922 ADP-ribosyl glycohydrolase%2C putative~PFAM: ADP-ribosylation/Crystallin J1~SPTR: Type I restriction-modification system methyltransferase subunit%3B~PFAM: ADP-ribosylglycohydrolase gene gene2503 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2445 Sgly_2446 Sgly_2446 Sgly_2446 2487438 2488472 - DNA polymerase III%2C delta subunit COGs: COG1466 DNA polymerase III delta subunit~InterPro IPR010372: IPR005790~KEGG: dsy:DSY3146 hypothetical protein~PFAM: DNA polymerase III%2C delta~SPTR: Putative uncharacterized protein%3B~TIGRFAM: DNA polymerase III%2C delta subunit~PFAM: DNA polymerase III%2C delta subunit~TIGRFAM: DNA polymerase III%2C delta subunit gene gene2504 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2446 Sgly_2447 Sgly_2447 Sgly_2447 2488462 2488668 - hypothetical protein KEGG: syf:Synpcc7942_1080 K+ transporter trk gene gene2505 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2447 Sgly_2448 Sgly_2448 Sgly_2448 2488743 2489261 - Peptidylprolyl isomerase COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family~InterPro IPR002130~KEGG: cbe:Cbei_0033 peptidylprolyl isomerase~PFAM: Peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type~PRIAM: Peptidylprolyl isomerase~SPTR: Peptidyl-prolyl cis-trans isomerase%3B~PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD gene gene2506 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2448 Sgly_2449 Sgly_2449 Sgly_2449 2489331 2491706 - DNA internalization-related competence protein ComEC/Rec2 COGs: COG2333 hydrolase (metallo-beta-lactamase superfamily)~InterPro IPR004477: IPR004797~KEGG: dhd:Dhaf_4317 ComEC/Rec2-related protein~PFAM: ComEC/Rec2-related protein~SPTR: ComEC/Rec2-related protein%3B~TIGRFAM: Competence protein ComEC/Rec2%3B ComEC/Rec2-related protein~PFAM: Competence protein%3B Metallo-beta-lactamase superfamily~TIGRFAM: ComEC/Rec2-related protein%3B DNA internalization-related competence protein ComEC/Rec2 gene gene2507 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2449 Sgly_2450 Sgly_2450 Sgly_2450 2491710 2492285 - competence protein ComEA helix-hairpin-helix repeat protein COGs: COG1555 DNA uptake protein and related DNA-binding protein~InterPro IPR019554: IPR000445: IPR003583: IPR004509~KEGG: dsy:DSY3148 hypothetical protein~PFAM: Soluble ligand binding domain%3B Helix-hairpin-helix motif~SMART: Helix-hairpin-helix DNA-binding motif%2C class 1~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Competence protein ComEA%2C helix-hairpin-helix domain~PFAM: SLBB domain%3B Helix-hairpin-helix motif~TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region%3B comEA protein gene gene2508 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2450 Sgly_2451 Sgly_2451 Sgly_2451 2492511 2494175 + cell wall binding repeat 2-containing protein COGs: COG2247 Putative cell wall-binding domain~InterPro IPR007253~KEGG: clj:CLJU_c22350 putative cell wall-binding protein~PFAM: Putative cell wall binding repeat 2~SPTR: Predicted cell wall binding protein%3B~PFAM: Putative cell wall binding repeat 2 gene gene2509 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2451 Sgly_2452 Sgly_2452 Sgly_2452 2494255 2496738 - leucyl-tRNA synthetase COGs: COG0495 Leucyl-tRNA synthetase~InterPro IPR002300: IPR013155: IPR002302~KEGG: dhd:Dhaf_4328 leucyl-tRNA synthetase~PFAM: Aminoacyl-tRNA synthetase%2C class Ia%3B Valyl/Leucyl/Isoleucyl-tRNA synthetase%2C class I%2C anticodon-binding~PRIAM: Valine--tRNA ligase.%2C Leucine--tRNA ligase~SPTR: Leucyl-tRNA synthetase%3B~TIGRFAM: Leucyl-tRNA synthetase%2C class Ia%2C bacterial/mitochondrial~PFAM: tRNA synthetases class I (I%2C L%2C M and V)%3B Anticodon-binding domain~TIGRFAM: leucyl-tRNA synthetase%2C eubacterial and mitochondrial family gene gene2510 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2452 Sgly_2453 Sgly_2453 Sgly_2453 2496806 2497153 - iojap-like protein COGs: COG0799 Iojap protein~InterPro IPR004394~KEGG: dhd:Dhaf_4329 iojap-like protein~PFAM: Iojap-related protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Iojap-related protein~PFAM: Domain of unknown function DUF143~TIGRFAM: iojap-like ribosome-associated protein gene gene2511 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2453 Sgly_2454 Sgly_2454 Sgly_2454 2497156 2497773 - metal dependent phosphohydrolase COGs: COG1713 HD superfamily hydrolase involved in NAD metabolism~InterPro IPR006674: IPR003607: IPR005249~KEGG: dsy:DSY3160 hypothetical protein~PFAM: Metal-dependent phosphohydrolase%2C HD subdomain~SMART: Metal-dependent phosphohydrolase%2C HD domain~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Conserved hypothetical protein CHP00488~PFAM: HD domain~TIGRFAM: putative HD superfamily hydrolase of NAD metabolism gene gene2512 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2454 Sgly_2455 Sgly_2455 Sgly_2455 2497983 2498237 - RNP-1 like RNA-binding protein COGs: COG0724 RNA-binding protein (RRM domain)~InterPro IPR000504~KEGG: dhd:Dhaf_4331 RNP-1 like RNA-binding protein~PFAM: RNA recognition motif%2C RNP-1~SMART: RNA recognition motif%2C RNP-1~SPTR: RNP-1 like RNA-binding protein%3B~PFAM: RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain) gene gene2513 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2455 Sgly_2456 Sgly_2456 Sgly_2456 2498323 2498964 - nicotinate-nucleotide adenylyltransferase COGs: COG1057 Nicotinic acid mononucleotide adenylyltransferase~HAMAP: Probable nicotinate-nucleotide adenylyltransferase~InterPro IPR004820: IPR004821: IPR005248~KEGG: dsy:DSY3161 nicotinic acid mononucleotide adenylyltransferase~PFAM: Cytidylyltransferase~PRIAM: Nicotinate-nucleotide adenylyltransferase~SPTR: Probable nicotinate-nucleotide adenylyltransferase%3B~TIGRFAM: Probable nicotinate-nucleotide adenylyltransferase%3B Cytidyltransferase-related~PFAM: Cytidylyltransferase%3B Cytidylyltransferase C-terminal domain (DUF2432)~TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase%3B cytidyltransferase-related domain gene gene2514 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2456 Sgly_2457 Sgly_2457 Sgly_2457 2498989 2499279 - RNA-binding%2C CRM domain protein COGs: COG1534 RNA-binding protein containing KH domain possibly ribosomal protein~InterPro IPR001890: IPR017924~KEGG: dhd:Dhaf_4333 protein of unknown function UPF0044~PFAM: RNA-binding%2C CRM domain~SPTR: Putative uncharacterized protein%3B~TIGRFAM: RNA-binding%2C CRM domain%2C prokaryote~PFAM: CRS1 / YhbY (CRM) domain~TIGRFAM: putative RNA-binding protein%2C YhbY family gene gene2515 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2457 Sgly_2458 Sgly_2458 Sgly_2458 2499282 2500559 - GTPase obg COGs: COG0536 GTPase~HAMAP: GTPase obg~InterPro IPR006169: IPR002917: IPR015349: IPR014100: IPR 005225~KEGG: dhd:Dhaf_4334 GTPase ObgE~PFAM: GTP1/OBG subdomain%3B GTP-binding protein%2C HSR1-related%3B GTP-binding protein GTP1/OBG%2C C-terminal~SPTR: GTPase obg%3B~TIGRFAM: GTP-binding protein Obg/CgtA%3B Small GTP-binding protein%3B GTP-binding protein GTP1/OBG%2C C-terminal~PFAM: GTPase of unknown function%3B Domain of unknown function (DUF1967)%3B GTP1/OBG~TIGRFAM: Obg family GTPase CgtA%3B Obg family GTPase CgtA%2C C-terminal extension%3B small GTP-binding protein domain gene gene2516 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2458 Sgly_2459 Sgly_2459 Sgly_2459 2500606 2501100 - signal transduction histidine kinase regulating citrate/malate metabolism KEGG: dhd:Dhaf_4335 signal transduction histidine kinase regulating citrate/malate metabolism~SPTR: Putative uncharacterized protein gene gene2517 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2459 Sgly_2460 Sgly_2460 Sgly_2460 2501168 2501443 - LSU ribosomal protein L27P COGs: COG0211 Ribosomal protein L27~HAMAP: Ribosomal protein L27~InterPro IPR001684~KEGG: dhd:Dhaf_4336 50S ribosomal protein L27~PFAM: Ribosomal protein L27~SPTR: 50S ribosomal protein L27%3B~TIGRFAM: Ribosomal protein L27~PFAM: Ribosomal L27 protein~TIGRFAM: ribosomal protein L27 gene gene2518 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2460 Sgly_2461 Sgly_2461 Sgly_2461 2501512 2501823 - LSU ribosomal protein L21P COGs: COG0261 Ribosomal protein L21~HAMAP: Ribosomal protein L21~InterPro IPR001787~KEGG: cno:NT01CX_0081 50S ribosomal protein L21~PFAM: Ribosomal protein L21~SPTR: 50S ribosomal protein L21%3B~TIGRFAM: Ribosomal protein L21~PFAM: Ribosomal prokaryotic L21 protein~TIGRFAM: ribosomal protein L21 gene gene2519 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2461 Sgly_2462 Sgly_2462 Sgly_2462 2501998 2502765 - Protein of unknown function DUF2344 COGs: COG5011 conserved hypothetical protein~InterPro IPR018768~KEGG: dhd:Dhaf_4340 radical sam protein%2C putative~PFAM: Protein of unknown function DUF2344~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterized protein conserved in bacteria (DUF2344) gene gene2520 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2462 Sgly_2463 Sgly_2463 Sgly_2463 2502725 2504629 - Radical SAM domain protein COGs: COG1032 Fe-S oxidoreductase~InterPro IPR007197: IPR006638~KEGG: dsy:DSY3169 hypothetical protein~PFAM: Radical SAM~SMART: Elongator protein 3/MiaB/NifB~SPTR: Putative uncharacterized protein%3B~PFAM: Radical SAM superfamily gene gene2521 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2463 Sgly_2464 Sgly_2464 Sgly_2464 2504718 2505629 - peptidase M50 COGs: COG1994 Zn-dependent protease~InterPro IPR008915~KEGG: dhd:Dhaf_4342 peptidase M50~PFAM: Peptidase M50~SPTR: Putative uncharacterized protein%3B~PFAM: Peptidase family M50 gene gene2522 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2464 Sgly_2465 Sgly_2465 Sgly_2465 2505652 2506407 - Peptidase M23 COGs: COG4942 Membrane-bound metallopeptidase~InterPro IPR016047~KEGG: dhd:Dhaf_4343 peptidase M23~PFAM: Peptidase M23~SPTR: Putative uncharacterized protein%3B~PFAM: Peptidase family M23 gene gene2523 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2465 Sgly_2466 Sgly_2466 Sgly_2466 2506547 2507719 - rod shape-determining protein RodA COGs: COG0772 Bacterial cell division membrane protein~InterPro IPR001182: IPR011923~KEGG: dsy:DSY3172 hypothetical protein~PFAM: Cell cycle protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Rod shape-determining protein RodA~PFAM: Cell cycle protein~TIGRFAM: rod shape-determining protein RodA gene gene2524 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2466 Sgly_2467 Sgly_2467 Sgly_2467 2507926 2508219 - cell division topological specificity factor MinE HAMAP: Septum formation topological specificity factor MinE~InterPro IPR005527~KEGG: dhd:Dhaf_4345 cell division topological specificity factor MinE~PFAM: Septum formation topological specificity factor MinE~SPTR: Cell division topological specificity factor%3B~TIGRFAM: Septum formation topological specificity factor MinE~PFAM: Septum formation topological specificity factor MinE~TIGRFAM: cell division topological specificity factor MinE gene gene2525 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2467 Sgly_2468 Sgly_2468 Sgly_2468 2508249 2509028 - septum site-determining protein MinD COGs: COG2894 Septum formation inhibitor-activating ATPase~InterPro IPR010223~KEGG: dhd:Dhaf_4346 septum site-determining protein MinD~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Septum site-determining protein MinD~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain~TIGRFAM: septum site-determining protein MinD gene gene2526 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2468 Sgly_2469 Sgly_2469 Sgly_2469 2509207 2511273 - peptidoglycan glycosyltransferase COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2~InterPro IPR005311: IPR001460: IPR017790~KEGG: dhd:Dhaf_4348 penicillin-binding protein 2~PFAM: Penicillin-binding protein%2C transpeptidase%3B Penicillin-binding protein%2C dimerisation domain~PRIAM: Peptidoglycan glycosyltransferase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Penicillin-binding protein 2~PFAM: Penicillin binding protein transpeptidase domain%3B Penicillin-binding Protein dimerisation domain~TIGRFAM: penicillin-binding protein 2 gene gene2527 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2469 Sgly_2470 Sgly_2470 Sgly_2470 2511298 2511807 - rod shape-determining protein MreD InterPro IPR007227~KEGG: dhd:Dhaf_4349 rod shape-determining protein MreD~PFAM: Cell shape-determining protein MreD~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Cell shape-determining protein MreD~PFAM: rod shape-determining protein MreD~TIGRFAM: rod shape-determining protein MreD gene gene2528 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2470 Sgly_2471 Sgly_2471 Sgly_2471 2511807 2512673 - rod shape-determining protein MreC COGs: COG1792 Cell shape-determining protein~InterPro IPR007221: IPR005223~KEGG: dsy:DSY3178 hypothetical protein~PFAM: Rod shape-determining protein MreC~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Rod shape-determining protein MreC%2C subtype~PFAM: rod shape-determining protein MreC~TIGRFAM: rod shape-determining protein MreC gene gene2529 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2471 Sgly_2472 Sgly_2472 Sgly_2472 2512691 2513707 - rod shape-determining protein MreB COGs: COG1077 Actin-like ATPase involved in cell morphogenesis~InterPro IPR004753~KEGG: dhd:Dhaf_4351 rod shape-determining protein MreB~PFAM: Cell shape determining protein MreB/Mrl~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Cell shape determining protein MreB/Mrl~PFAM: MreB/Mbl protein~TIGRFAM: cell shape determining protein%2C MreB/Mrl family gene gene2530 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2472 Sgly_2473 Sgly_2473 Sgly_2473 2513806 2514498 - DNA replication and repair protein RadC COGs: COG2003 DNA repair protein~InterPro IPR001405~KEGG: dhd:Dhaf_4352 DNA repair protein RadC~PFAM: Uncharacterised protein family%2C RadC-like~SPTR: UPF0758 protein Dhaf_4352%3B~TIGRFAM: Uncharacterised protein family%2C RadC-like~manually curated~PFAM: Protein of unknown function (DUF2466)~TIGRFAM: DNA repair protein radc gene gene2531 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2473 Sgly_2474 Sgly_2474 Sgly_2474 2514528 2515130 - Septum formation protein Maf COGs: COG0424 Nucleotide-binding protein implicated in inhibition of septum formation~HAMAP: Maf-like protein~InterPro IPR003697~KEGG: dhd:Dhaf_4353 maf protein~PFAM: Maf-like protein~SPTR: Maf-like protein Dhaf_4353%3B~TIGRFAM: Maf-like protein~PFAM: Maf-like protein~TIGRFAM: MAF protein gene gene2532 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2474 Sgly_2475 Sgly_2475 Sgly_2475 2515255 2516850 - 2-isopropylmalate synthase/homocitrate synthase family protein COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase~InterPro IPR000891: IPR013709: IPR005675~KEGG: dth:DICTH_1068 putative alpha-isopropylmalate/homocitrate synthase family transferase~PFAM: 2-isopropylmalate synthase LeuA%2C allosteric (dimerisation) domain%3B Pyruvate carboxyltransferase~PRIAM: (R)-citramalate synthase~SPTR: 2-isopropylmalate synthase/homocitrate synthase family protein%3B~TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase related~PFAM: LeuA allosteric (dimerisation) domain%3B HMGL-like~TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein gene gene2533 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2475 Sgly_2476 Sgly_2476 Sgly_2476 2517004 2517636 - Redox-sensing transcriptional repressor rex COGs: COG2344 AT-rich DNA-binding protein~HAMAP: Redox-sensing transcriptional repressor rex~InterPro IPR009718: IPR003781~KEGG: dhd:Dhaf_4356 redox-sensing transcriptional repressor REX~PFAM: CoA-binding%3B Rex DNA-binding%2C C-terminal~SPTR: Redox-sensing transcriptional repressor rex%3B~PFAM: CoA binding domain%3B Putative DNA-binding protein N-terminus gene gene2534 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2476 Sgly_2477 Sgly_2477 Sgly_2477 2517776 2518498 - hypothetical protein KEGG: dhd:Dhaf_4357 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2535 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2477 Sgly_2478 Sgly_2478 Sgly_2478 2518607 2520430 - cell wall binding repeat 2-containing protein COGs: COG2247 Putative cell wall-binding domain~InterPro IPR007253~KEGG: clj:CLJU_c17000 putative cell wall-binding protein~PFAM: Putative cell wall binding repeat 2~SPTR: Putative uncharacterized protein%3B~PFAM: Putative cell wall binding repeat 2 gene gene2536 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2478 Sgly_2479 Sgly_2479 Sgly_2479 2520550 2521887 - FolC bifunctional protein COGs: COG0285 Folylpolyglutamate synthase~InterPro IPR013221: IPR004101: IPR001645~KEGG: dsy:DSY3187 hypothetical protein~PFAM: Mur ligase%2C central%3B Mur ligase%2C C-terminal~PRIAM: Tetrahydrofolate synthase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Folylpolyglutamate synthetase~PFAM: Mur ligase family%2C glutamate ligase domain%3B Mur ligase middle domain~TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase gene gene2537 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2479 Sgly_2480 Sgly_2480 Sgly_2480 2521913 2524591 - valyl-tRNA synthetase COGs: COG0525 Valyl-tRNA synthetase~HAMAP: Valyl-tRNA synthetase~InterPro IPR002300: IPR013155: IPR019499: IPR002303~KEGG: dsy:DSY3188 valyl-tRNA synthetase~PFAM: Aminoacyl-tRNA synthetase%2C class Ia%3B Valyl/Leucyl/Isoleucyl-tRNA synthetase%2C class I%2C anticodon-binding%3B Valyl-tRNA synthetase%2C class Ia%2C tRNA binding arm~PRIAM: Valine--tRNA ligase~SPTR: Valyl-tRNA synthetase%3B~TIGRFAM: Valyl-tRNA synthetase%2C class Ia~PFAM: tRNA synthetases class I (I%2C L%2C M and V)%3B Anticodon-binding domain%3B Valyl tRNA synthetase tRNA binding arm~TIGRFAM: valyl-tRNA synthetase gene gene2538 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2480 Sgly_2481 Sgly_2481 Sgly_2481 2524967 2525317 - protein of unknown function DUF6 transmembrane InterPro IPR000620~KEGG: mta:Moth_2476 transporter~PFAM: Protein of unknown function DUF6%2C transmembrane~SPTR: Transporter%3B~PFAM: EamA-like transporter family gene gene2539 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2481 Sgly_2482 Sgly_2482 Sgly_2482 2525318 2526049 - glycosyl transferase family 2 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis~InterPro IPR001173~KEGG: hmo:HM1_0450 glycosyl transferase%2C family 2~PFAM: Glycosyl transferase%2C family 2~SPTR: Glycosyl transferase%2C family 2%3B~PFAM: Glycosyl transferase family 2 gene gene2540 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2482 Sgly_2483 Sgly_2483 Sgly_2483 2526046 2527527 - glycosyl transferase family 39 COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family~InterPro IPR003342~KEGG: hmo:HM1_0452 dolichyl-phosphate-mannose-protein mannosyltransferase%2C putative~PFAM: Glycosyl transferase%2C family 39~SPTR: Dolichyl-phosphate-mannose-protein mannosyltransferase%2C putative gene gene2541 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2483 Sgly_2484 Sgly_2484 Sgly_2484 2527658 2528092 - hypothetical protein KEGG: dhd:Dhaf_4364 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2542 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2484 Sgly_2485 Sgly_2485 Sgly_2485 2528239 2528709 - hypothetical protein KEGG: cgt:cgR_1598 aconitate hydratase~SPTR: Putative uncharacterized protein gene gene2543 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2485 Sgly_2486 Sgly_2486 Sgly_2486 2528720 2529373 - GTP-binding protein engB COGs: COG0218 GTPase~HAMAP: GTP-binding protein%2C ribosome biogenesis%2C YsxC~InterPro IPR002917: IPR019987: IPR005225~KEGG: dhd:Dhaf_4367 ribosome biogenesis GTP-binding protein YsxC~PFAM: GTP-binding protein%2C HSR1-related~SPTR: Probable GTP-binding protein engB%3B~TIGRFAM: GTP-binding protein%2C ribosome biogenesis%2C YsxC%3B Small GTP-binding protein~PFAM: GTPase of unknown function~TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB%3B small GTP-binding protein domain gene gene2544 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2486 Sgly_2487 Sgly_2487 Sgly_2487 2529411 2531825 - ATP-dependent proteinase COGs: COG0466 ATP-dependent Lon protease~InterPro IPR003111: IPR003959: IPR003593: IPR004815~KEGG: dhd:Dhaf_4368 ATP-dependent protease La~PFAM: Peptidase S16%2C lon N-terminal%3B ATPase%2C AAA-type%2C core~PRIAM: Endopeptidase La~SMART: Peptidase S16%2C lon N-terminal%3B ATPase%2C AAA+ type%2C core~SPTR: ATP-dependent protease La%3B~TIGRFAM: Peptidase S16%2C ATP-dependent protease La~PFAM: ATP-dependent protease La (LON) domain%3B ATPase family associated with various cellular activities (AAA)%3B Lon protease (S16) C-terminal proteolytic domain~TIGRFAM: ATP-dependent protease La gene gene2545 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2487 Sgly_2488 Sgly_2488 Sgly_2488 2531891 2533600 - ATP-dependent protease LonB COGs: COG1067 ATP-dependent protease~InterPro IPR003959: IPR003593: IPR014251~KEGG: dhd:Dhaf_4369 sigma 54 interacting domain protein~PFAM: ATPase%2C AAA-type%2C core~PRIAM: Endopeptidase La~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Sporulation protease LonB~PFAM: ATPase family associated with various cellular activities (AAA)%3B Lon protease (S16) C-terminal proteolytic domain~TIGRFAM: ATP-dependent protease LonB gene gene2546 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2488 Sgly_2489 Sgly_2489 Sgly_2489 2533773 2534321 - hypothetical protein KEGG: aar:Acear_1236 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2547 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2489 Sgly_2490 Sgly_2490 Sgly_2490 2534547 2535800 - ATP-dependent Clp protease ATP-binding subunit ClpX COGs: COG1219 ATP-dependent protease Clp ATPase subunit~HAMAP: Clp protease%2C ATP-binding subunit ClpX~InterPro IPR010603: IPR013093: IPR019489: IPR003593: IPR 004487~KEGG: dhd:Dhaf_4377 ATP-dependent protease ATP-binding subunit ClpX~PFAM: ATPase%2C AAA-2%3B Zinc finger%2C C4-type%3B Clp ATPase%2C C-terminal~SMART: ATPase%2C AAA+ type%2C core~SPTR: ATP-dependent Clp protease ATP-binding subunit ClpX%3B~TIGRFAM: Clp protease%2C ATP-binding subunit ClpX~PFAM: AAA domain (Cdc48 subfamily)%3B C-terminal%2C D2-small domain%2C of ClpB protein%3B ClpX C4-type zinc finger~TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX) gene gene2548 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2490 Sgly_2491 Sgly_2491 Sgly_2491 2535842 2537179 - Trigger factor COGs: COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)~HAMAP: Trigger factor~InterPro IPR008881: IPR001179: IPR008880: IPR005215~KEGG: dhd:Dhaf_4378 trigger factor~PFAM: Trigger factor%2C ribosome-binding%2C bacterial%3B Peptidyl-prolyl cis-trans isomerase%2C FKBP-type%3B Trigger factor%2C C-terminal%2C bacterial~SPTR: Trigger factor%3B~TIGRFAM: Trigger factor~PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase%3B Bacterial trigger factor protein (TF)%3B Bacterial trigger factor protein (TF) C-terminus~TIGRFAM: trigger factor gene gene2549 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2491 Sgly_2492 Sgly_2492 Sgly_2492 2537360 2538529 - Monogalactosyldiacylglycerol synthase COGs: COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase~InterPro IPR009695: IPR001296~KEGG: dhd:Dhaf_3178 monogalactosyldiacylglycerol synthase~PFAM: Monogalactosyldiacylglycerol synthase%3B Glycosyl transferase%2C group 1~PRIAM: Monogalactosyldiacylglycerol synthase~SPTR: Monogalactosyldiacylglycerol synthase%3B~PFAM: Glycosyltransferase family 28 C-terminal domain%3B Monogalactosyldiacylglycerol (MGDG) synthase gene gene2550 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2492 Sgly_2493 Sgly_2493 Sgly_2493 2538724 2539371 - channel protein%2C hemolysin III family COGs: COG1272 membrane protein hemolysin III homolog~InterPro IPR004254: IPR005744~KEGG: swo:Swol_1904 membrane protein%2C hemolysin III-like protein~PFAM: Hly-III related~SPTR: Membrane protein%2C hemolysin III-like protein%3B~TIGRFAM: HylII~PFAM: Haemolysin-III related~TIGRFAM: channel protein%2C hemolysin III family gene gene2551 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2493 Sgly_2494 Sgly_2494 Sgly_2494 2539590 2540087 + Domain of unknown function DUF1836 InterPro IPR014975~KEGG: cno:NT01CX_2306 hypothetical protein~PFAM: Protein of unknown function DUF1836~SPTR: Putative uncharacterized protein%3B~PFAM: Domain of unknown function (DUF1836) gene gene2552 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2494 Sgly_2495 Sgly_2495 Sgly_2495 2540177 2542303 - glycosyl transferase family 39 COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family~InterPro IPR003342~KEGG: ckr:CKR_1254 hypothetical protein~PFAM: Glycosyl transferase%2C family 39~SPTR: Putative uncharacterized protein%3B~PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase gene gene2553 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2495 Sgly_2496 Sgly_2496 Sgly_2496 2542710 2543108 + Uncharacterized protein family UPF0150 InterPro IPR005357~KEGG: dsy:DSY3841 hypothetical protein~PFAM: Uncharacterised protein family UPF0150~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterised protein family (UPF0150) gene gene2554 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2496 Sgly_2497 Sgly_2497 Sgly_2497 2543450 2543782 - pseudogene gene2556 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2497 Sgly_2498 Sgly_2498 Sgly_2498 2543921 2544280 - Dinitrogenase iron-molybdenum cofactor biosynthesis protein COGs: COG1433 conserved hypothetical protein~InterPro IPR003731~KEGG: dsy:DSY3437 hypothetical protein~PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis~SPTR: Putative uncharacterized protein%3B~PFAM: Dinitrogenase iron-molybdenum cofactor gene gene2557 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2498 Sgly_2499 Sgly_2499 Sgly_2499 2544258 2545118 - ATPase-like%2C ParA/MinD COGs: COG0489 ATPase involved in chromosome partitioning~InterPro IPR019591~KEGG: dsy:DSY3438 hypothetical protein~PFAM: ATPase-like%2C ParA/MinD~SPTR: Putative uncharacterized protein%3B~PFAM: ParA/MinD ATPase like gene gene2558 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2499 Sgly_2500 Sgly_2500 Sgly_2500 2545165 2546052 - cobyrinic acid ac-diamide synthase COGs: COG1149 MinD superfamily P-loop ATPase containing an inserted ferredoxin domain~KEGG: dhd:Dhaf_1984 cobyrinic acid ac-diamide synthase~SPTR: Putative uncharacterized protein%3B~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain%3B 4Fe-4S binding domain gene gene2559 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2500 Sgly_2501 Sgly_2501 Sgly_2501 2546030 2546887 - cobyrinic acid a%2Cc-diamide synthase COGs: COG1149 MinD superfamily P-loop ATPase containing an inserted ferredoxin domain~KEGG: amt:Amet_1465 cobyrinic acid a%2Cc-diamide synthase~SPTR: Cobyrinic acid a%2Cc-diamide synthase%3B~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain gene gene2560 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2501 Sgly_2502 Sgly_2502 Sgly_2502 2546889 2547257 - Dinitrogenase iron-molybdenum cofactor biosynthesis protein COGs: COG1433 conserved hypothetical protein~InterPro IPR003731~KEGG: amt:Amet_1464 dinitrogenase iron-molybdenum cofactor biosynthesis protein~PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis~SPTR: Dinitrogenase iron-molybdenum cofactor biosynthesis protein%3B~PFAM: Dinitrogenase iron-molybdenum cofactor gene gene2561 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2502 Sgly_2503 Sgly_2503 Sgly_2503 2547352 2547573 - hypothetical protein KEGG: ppd:Ppro_1956 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2562 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2503 Sgly_2504 Sgly_2504 Sgly_2504 2547859 2548605 - hypothetical protein KEGG: clj:CLJU_c37960 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Domain of unknown function (DUF364) gene gene2563 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2504 Sgly_2505 Sgly_2505 Sgly_2505 2548645 2549739 - Sulfate-transporting ATPase COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components~InterPro IPR003593: IPR003439~KEGG: dae:Dtox_3449 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Sulfate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related%3B~PFAM: ABC transporter gene gene2564 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2505 Sgly_2506 Sgly_2506 Sgly_2506 2549736 2550551 - NifC-like ABC-type porter COGs: COG0555 ABC-type sulfate transport system permease component~InterPro IPR000515: IPR006469~KEGG: dae:Dtox_3448 NifC-like ABC-type porter~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: NifC-like ABC-type porter%3B~TIGRFAM: NifC-like ABC-type porter~PFAM: Binding-protein-dependent transport system inner membrane component~TIGRFAM: NifC-like ABC-type porter gene gene2565 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2506 Sgly_2507 Sgly_2507 Sgly_2507 2550526 2551311 - molybdenum ABC transporter%2C periplasmic molybdate-binding protein COGs: COG0725 ABC-type molybdate transport system periplasmic component~InterPro IPR006059: IPR005950~KEGG: dae:Dtox_3447 molybdenum ABC transporter%2C periplasmic molybdate-binding protein~PFAM: Bacterial extracellular solute-binding%2C family 1~SPTR: Molybdenum ABC transporter%2C periplasmic molybdate-binding protein%3B~TIGRFAM: Molybdenum ABC transporter%2C periplasmic binding protein~TIGRFAM: molybdenum ABC transporter%2C periplasmic molybdate-binding protein gene gene2566 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2507 Sgly_2508 Sgly_2508 Sgly_2508 2551801 2552187 - UPF0251 protein COGs: COG1342 DNA-binding protein~HAMAP: UPF0251 protein~InterPro IPR002852~KEGG: amt:Amet_1463 hypothetical protein~PFAM: Uncharacterised protein family UPF0251~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function DUF134 gene gene2567 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2508 Sgly_2509 Sgly_2509 Sgly_2509 2553103 2554113 + aliphatic sulfonates family ABC transporter%2C periplasmic ligand-binding protein COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components~KEGG: gwc:GWCH70_2622 aliphatic sulfonates family ABC transporter%2C periplsmic ligand-binding protein~SPTR: Taurine-binding periplasmic protein (Sulfate starvation-induced protein 1) (SSI1)%3B~PFAM: NMT1/THI5 like gene gene2568 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2509 Sgly_2510 Sgly_2510 Sgly_2510 2554228 2555016 + Taurine-transporting ATPase COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: tjr:TherJR_1472 ABC transporter related protein~PFAM: ABC transporter-like~PRIAM: Taurine-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related protein%3B~PFAM: ABC transporter gene gene2569 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2510 Sgly_2511 Sgly_2511 Sgly_2511 2555013 2555993 + Asparaginase COGs: COG0252 L-asparaginase/ Glu-tRNAGln amidotransferase subunit D~InterPro IPR006034~KEGG: cbk:CLL_A1207 L-asparaginase%2C type II~PFAM: Asparaginase/glutaminase~PRIAM: Asparaginase~SPTR: L-asparaginase%2C type II%3B~PFAM: Asparaginase gene gene2570 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2511 Sgly_2512 Sgly_2512 Sgly_2512 2556017 2556796 + binding-protein-dependent transport systems inner membrane component COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component~InterPro IPR000515~KEGG: rci:RCIX445 putative ABC-type sulfonate import system%2C permease component~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Putative ABC-type sulfonate import system%2C permease component%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2571 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2512 Sgly_2513 Sgly_2513 Sgly_2513 2556821 2557576 + transcriptional regulator%2C GntR family COGs: COG2188 Transcriptional regulators~InterPro IPR000524: IPR011663~KEGG: gyc:GYMC61_0406 transcriptional regulator%2C GntR family~PFAM: UbiC transcription regulator-associated%3B HTH transcriptional regulator%2C GntR~SMART: HTH transcriptional regulator%2C GntR~SPTR: Transcriptional regulator%2C GntR family%3B~PFAM: Bacterial regulatory proteins%2C gntR family%3B UTRA domain gene gene2572 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2513 Sgly_2514 Sgly_2514 Sgly_2514 2557652 2558395 + protein of unknown function DUF81 InterPro IPR002781~KEGG: kko:Kkor_1718 protein of unknown function DUF81~PFAM: Protein of unknown function DUF81~SPTR: Putative uncharacterized protein%3B~PFAM: Sulfite exporter TauE/SafE gene gene2573 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2514 Sgly_2515 Sgly_2515 Sgly_2515 2558468 2558935 + hypothetical protein KEGG: fjo:Fjoh_2850 DEAD/DEAH box helicase domain-containing protein~SPTR: Putative uncharacterized protein gene gene2574 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2515 Sgly_2516 Sgly_2516 Sgly_2516 2559004 2559930 - hypothetical protein KEGG: hmg:100212101 hypothetical protein LOC100212101~SPTR: Gram positive anchor domain protein gene gene2575 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2516 Sgly_2517 Sgly_2517 Sgly_2517 2560209 2561624 - D-lactate dehydrogenase (cytochrome) COGs: COG0277 FAD/FMN-containing dehydrogenase~InterPro IPR006094: IPR004113~KEGG: dhd:Dhaf_4382 D-lactate dehydrogenase (cytochrome)~PFAM: FAD-linked oxidase%2C C-terminal%3B FAD linked oxidase%2C N-terminal~PRIAM: D-lactate dehydrogenase (cytochrome)~SPTR: Putative uncharacterized protein%3B~PFAM: FAD binding domain%3B FAD linked oxidases%2C C-terminal domain~TIGRFAM: glycolate oxidase%2C subunit GlcD gene gene2577 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2517 Sgly_2518 Sgly_2518 Sgly_2518 2561652 2562929 - FAD linked oxidase domain protein COGs: COG0277 FAD/FMN-containing dehydrogenase~InterPro IPR006094: IPR004113~KEGG: dhd:Dhaf_4383 FAD linked oxidase domain protein~PFAM: FAD linked oxidase%2C N-terminal%3B FAD-linked oxidase%2C C-terminal~SPTR: Putative uncharacterized protein%3B~PFAM: FAD binding domain%3B FAD linked oxidases%2C C-terminal domain gene gene2578 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2518 Sgly_2519 Sgly_2519 Sgly_2519 2563027 2564262 - protein of unknown function DUF224 cysteine-rich region domain protein COGs: COG0247 Fe-S oxidoreductase~InterPro IPR004017~KEGG: dhd:Dhaf_4384 protein of unknown function DUF224 cysteine-rich region domain protein~PFAM: Cysteine-rich domain~SPTR: Putative uncharacterized protein%3B~PFAM: Cysteine-rich domain gene gene2579 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2519 Sgly_2520 Sgly_2520 Sgly_2520 2564465 2565349 - 3-hydroxyisobutyrate dehydrogenase COGs: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase~InterPro IPR006115~KEGG: sth:STH938 3-hydroxyisobutyrate dehydrogenase~PFAM: 6-phosphogluconate dehydrogenase%2C NAD-binding~PRIAM: 3-hydroxyisobutyrate dehydrogenase~SPTR: 3-hydroxyisobutyrate dehydrogenase%3B~PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase gene gene2580 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2520 Sgly_2521 Sgly_2521 Sgly_2521 2565541 2566479 - 1-deoxy-D-xylulose-5-phosphate synthase COGs: COG3958 Transketolase C-terminal subunit~InterPro IPR005475: IPR005476~KEGG: tjr:TherJR_2764 transketolase central region~PFAM: Transketolase%2C C-terminal%3B Transketolase-like%2C pyrimidine-binding domain~PRIAM: 1-deoxy-D-xylulose-5-phosphate synthase~SPTR: Transketolase central region%3B~PFAM: Transketolase%2C C-terminal domain%3B Transketolase%2C pyrimidine binding domain gene gene2581 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2521 Sgly_2522 Sgly_2522 Sgly_2522 2566481 2567305 - transketolase subunit A COGs: COG3959 Transketolase N-terminal subunit~InterPro IPR005474~KEGG: ate:Athe_2060 transketolase domain protein~PFAM: Transketolase%2C N-terminal~PRIAM: Transketolase~SPTR: Transketolase domain protein%3B~PFAM: Transketolase%2C thiamine diphosphate binding domain gene gene2582 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2522 Sgly_2523 Sgly_2523 Sgly_2523 2567512 2568141 - hypothetical protein KEGG: dhd:Dhaf_4385 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2583 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2523 Sgly_2524 Sgly_2524 Sgly_2524 2568329 2569117 - transcriptional regulator%2C IclR family COGs: COG1414 Transcriptional regulator~InterPro IPR005471: IPR014757~KEGG: dhd:Dhaf_4386 transcriptional regulator%2C IclR family~PFAM: Transcription regulator IclR%2C C-terminal%3B Transcription regulator IclR%2C N-terminal~SMART: Transcription regulator IclR%2C N-terminal~SPTR: Transcriptional regulator%2C IclR family%3B~PFAM: IclR helix-turn-helix domain%3B Bacterial transcriptional regulator gene gene2584 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2524 Sgly_2525 Sgly_2525 Sgly_2525 2569413 2569616 - pseudogene gene2585 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2525 Sgly_2526 Sgly_2526 Sgly_2526 2569687 2570115 - Mov34/MPN/PAD-1 family protein COGs: COG1310 metal-dependent protease of the PAD1/JAB1 superfamily~InterPro IPR000555~KEGG: cth:Cthe_2540 Mov34/MPN/PAD-1~PFAM: Mov34/MPN/PAD-1~SMART: Mov34/MPN/PAD-1~SPTR: Mov34/MPN/PAD-1%3B~PFAM: Mov34/MPN/PAD-1 family gene gene2586 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2526 Sgly_2527 Sgly_2527 Sgly_2527 2570124 2570930 - UBA/THIF-type NAD/FAD binding protein COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2~InterPro IPR000594: IPR007901~KEGG: eel:EUBELI_00643 thiamine biosynthesis protein ThiF~PFAM: UBA/THIF-type NAD/FAD binding fold%3B MoeZ/MoeB~SPTR: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2%3B~PFAM: MoeZ/MoeB domain%3B ThiF family gene gene2587 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2527 Sgly_2528 Sgly_2528 Sgly_2528 2570930 2571136 - thiamine biosynthesis protein ThiS InterPro IPR003749: IPR010035~KEGG: eel:EUBELI_00642 thiamine biosynthesis ThiS~PFAM: ThiamineS~SPTR: Thiamine biosynthesis protein ThiS%3B~TIGRFAM: ThiS%2C thiamine-biosynthesis~PFAM: ThiS family~TIGRFAM: thiamine biosynthesis protein ThiS gene gene2588 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2528 Sgly_2529 Sgly_2529 Sgly_2529 2571240 2571485 - SirA-like domain-containing protein InterPro IPR001455~KEGG: eel:EUBELI_00640 hypothetical protein~PFAM: SirA-like~SPTR: Predicted redox protein%2C regulator of disulfide bond formation%3B~PFAM: SirA-like protein gene gene2589 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2529 Sgly_2530 Sgly_2530 Sgly_2530 2571478 2572347 - nitrite and sulphite reductase 4Fe-4S region COGs: COG2221 Dissimilatory sulfite reductase (desulfoviridin) alpha and beta subunits~InterPro IPR005117: IPR006067~KEGG: ere:EUBREC_0895 sulfite reductase%2C beta subunit~PFAM: Nitrite/sulphite reductase 4Fe-4S domain%3B Nitrite/sulphite reductase%2C hemoprotein beta-component%2C ferrodoxin-like~SPTR: Putative uncharacterized protein%3B~PFAM: Nitrite and sulphite reductase 4Fe-4S domain%3B 4Fe-4S binding domain%3B Nitrite/Sulfite reductase ferredoxin-like half domain gene gene2590 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2530 Sgly_2531 Sgly_2531 Sgly_2531 2572373 2573416 - transcriptional regulator%2C LacI family COGs: COG1609 Transcriptional regulators~InterPro IPR000843: IPR001761~KEGG: pjd:Pjdr2_5567 transcriptional regulator%2C LacI family~PFAM: HTH transcriptional regulator%2C LacI%3B Periplasmic binding protein/LacI transcriptional regulator~SMART: HTH transcriptional regulator%2C LacI~SPTR: Putative HTH-type transcriptional repressor PurR%3B~PFAM: Bacterial regulatory proteins%2C lacI family%3B family gene gene2591 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2531 Sgly_2532 Sgly_2532 Sgly_2532 2573545 2574459 - glycyl-radical enzyme activating protein family COGs: COG1180 Pyruvate-formate lyase-activating enzyme~InterPro IPR007197: IPR012839~KEGG: cbi:CLJ_B3456 glycyl-radical enzyme activating family protein~PFAM: Radical SAM~PRIAM: [Formate-C-acetyltransferase]-activating enzyme~SPTR: Glycyl-radical enzyme activating protein family%3B~TIGRFAM: Glycyl radical enzyme-activating~PFAM: Radical SAM superfamily~TIGRFAM: glycyl-radical enzyme activating protein family gene gene2592 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2532 Sgly_2533 Sgly_2533 Sgly_2533 2574446 2576677 - pyruvate formate-lyase PFL COGs: COG1882 Pyruvate-formate lyase~InterPro IPR004184: IPR001150~KEGG: ddf:DEFDS_2103 pyruvate formate-lyase~PFAM: Pyruvate formate-lyase%2C PFL%3B Formate C-acetyltransferase glycine radical~SPTR: Pyruvate formate-lyase%3B~PFAM: Glycine radical%3B Pyruvate formate lyase gene gene2593 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2533 Sgly_2534 Sgly_2534 Sgly_2534 2576777 2577715 - 4-hydroxyphenylacetate decarboxylase subunit A COGs: COG1180 Pyruvate-formate lyase-activating enzyme~InterPro IPR007197: IPR012839~KEGG: cbt:CLH_1869 glycyl-radical enzyme activating protein family~PFAM: Radical SAM~PRIAM: [Formate-C-acetyltransferase]-activating enzyme~SPTR: Glycyl-radical enzyme activating protein family%3B~TIGRFAM: Glycyl radical enzyme-activating~PFAM: Radical SAM superfamily~TIGRFAM: glycyl-radical enzyme activating protein family gene gene2594 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2534 Sgly_2535 Sgly_2535 Sgly_2535 2577712 2577975 - 4-hydroxyphenylacetate decarboxylase%2C regulatory subunit KEGG: cdl:CDR20291_0153 4-hydroxyphenylacetate decarboxylase%2C regulatory subunit~SPTR: 4-hydroxyphenylacetate decarboxylase%2C regulatory subunit gene gene2595 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2535 Sgly_2536 Sgly_2536 Sgly_2536 2578018 2580720 - 4-hydroxyphenylacetate decarboxylase subunit B COGs: COG1882 Pyruvate-formate lyase~InterPro IPR004184: IPR001150~KEGG: cbk:CLL_A1723 4-hydroxyphenylacetate decarboxylase%2C catalytic subunit~PFAM: Pyruvate formate-lyase%2C PFL%3B Formate C-acetyltransferase glycine radical~SPTR: 4-hydroxyphenylacetate decarboxylase%2C catalytic subunit%3B~PFAM: Glycine radical%3B Pyruvate formate lyase gene gene2596 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2536 Sgly_2537 Sgly_2537 Sgly_2537 2580740 2581753 - Uroporphyrinogen decarboxylase (URO-D) COGs: COG0407 Uroporphyrinogen-III decarboxylase~InterPro IPR000257~KEGG: cth:Cthe_2786 methylcobalamin:coenzyme M methyltransferase~PFAM: Uroporphyrinogen decarboxylase (URO-D)~SPTR: Methyltransferase MtaA/CmuA family%3B~PFAM: Uroporphyrinogen decarboxylase (URO-D)~TIGRFAM: methyltransferase%2C MtaA/CmuA family gene gene2597 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2537 Sgly_2538 Sgly_2538 Sgly_2538 2581758 2582423 - Methionine synthase COGs: COG5012 cobalamin binding protein~InterPro IPR003759: IPR006158~KEGG: cth:Cthe_2784 cobalamin B12-binding protein~PFAM: Cobalamin (vitamin B12)-binding%3B Methionine synthase%2C cobalamin (vitamin B12)-binding module%2C cap~PRIAM: Methionine synthase~SPTR: Cobalamin B12-binding domain protein%3B~PFAM: B12 binding domain~TIGRFAM: methyltransferase cognate corrinoid proteins%2C Methanosarcina family%3B methylmalonyl-CoA mutase C-terminal domain gene gene2598 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2538 Sgly_2539 Sgly_2539 Sgly_2539 2582450 2583502 - Uroporphyrinogen decarboxylase (URO-D) COGs: COG0407 Uroporphyrinogen-III decarboxylase~InterPro IPR000257~KEGG: geo:Geob_2498 uroporphyrinogen decarboxylase (URO-D)~PFAM: Uroporphyrinogen decarboxylase (URO-D)~SPTR: Uroporphyrinogen decarboxylase (URO-D)%3B~PFAM: Uroporphyrinogen decarboxylase (URO-D)~TIGRFAM: methyltransferase%2C MtaA/CmuA family gene gene2599 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2539 Sgly_2540 Sgly_2540 Sgly_2540 2583499 2584272 - hypothetical protein KEGG: cbh:CLC_1529 putative methylcobalamin:coenzyme M methyltransferase~SPTR: Uroporphyrinogen decarboxylase family protein%3B~PFAM: Uroporphyrinogen decarboxylase (URO-D) gene gene2600 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2540 Sgly_2541 Sgly_2541 Sgly_2541 2584283 2585947 - ferredoxin COGs: COG3894 Uncharacterized metal-binding protein~InterPro IPR001041~KEGG: cth:Cthe_2787 ferredoxin~PFAM: Ferredoxin~SPTR: Ferredoxin%3B~PFAM: 2Fe-2S iron-sulfur cluster binding domain gene gene2601 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2541 Sgly_2542 Sgly_2542 Sgly_2542 2586014 2587042 - Uroporphyrinogen decarboxylase (URO-D) COGs: COG0407 Uroporphyrinogen-III decarboxylase~InterPro IPR000257~KEGG: mmz:MmarC7_0076 uroporphyrinogen decarboxylase~PFAM: Uroporphyrinogen decarboxylase (URO-D)~SPTR: Uroporphyrinogen decarboxylase (URO-D)%3B~PFAM: Uroporphyrinogen decarboxylase (URO-D)~TIGRFAM: methyltransferase%2C MtaA/CmuA family gene gene2602 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2542 Sgly_2543 Sgly_2543 Sgly_2543 2587055 2588086 - hypothetical protein COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components~KEGG: mpl:Mpal_1134 NMT1/THI5 like domain protein~SPTR: NMT1/THI5 like domain protein%3B~PFAM: NMT1/THI5 like gene gene2603 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2543 Sgly_2544 Sgly_2544 Sgly_2544 2588103 2589698 - Rhodanese-like protein COGs: COG0607 Rhodanese-related sulfurtransferase~InterPro IPR001763~KEGG: bbr:BB4882 hypothetical protein~PFAM: Rhodanese-like~SMART: Rhodanese-like~SPTR: Putative uncharacterized protein%3B~PFAM: Rhodanese-like domain gene gene2604 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2544 Sgly_2545 Sgly_2545 Sgly_2545 2589711 2590484 - binding-protein-dependent transport systems inner membrane component COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component~InterPro IPR000515~KEGG: mpl:Mpal_1145 binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Binding-protein-dependent transport systems inner membrane component%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2605 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2545 Sgly_2546 Sgly_2546 Sgly_2546 2590484 2591320 - Taurine-transporting ATPase COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: ckr:CKR_0943 hypothetical protein~PFAM: ABC transporter-like~PRIAM: Taurine-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related%3B~PFAM: ABC transporter gene gene2606 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2546 Sgly_2547 Sgly_2547 Sgly_2547 2592486 2593049 - DoxX family protein InterPro IPR011637~KEGG: sth:STH2431 hypothetical protein~PFAM: DoxX~SPTR: Putative uncharacterized protein%3B~PFAM: DoxX gene gene2609 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2547 Sgly_2548 Sgly_2548 Sgly_2548 2593185 2593385 + pseudogene gene2610 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2548 Sgly_2549 Sgly_2549 Sgly_2549 2593389 2594600 - L-threonine synthase COGs: COG0498 Threonine synthase~InterPro IPR001926: IPR004450~KEGG: drm:Dred_0615 threonine synthase~PFAM: Pyridoxal phosphate-dependent enzyme%2C beta subunit~PRIAM: Threonine synthase~SPTR: L-threonine synthase%3B~TIGRFAM: Threonine synthase~PFAM: Pyridoxal-phosphate dependent enzyme~TIGRFAM: threonine synthase gene gene2611 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2549 Sgly_2550 Sgly_2550 Sgly_2550 2594633 2594938 - hypothetical protein KEGG: dhd:Dhaf_4209 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2612 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2550 Sgly_2551 Sgly_2551 Sgly_2551 2595227 2595919 + YheO-like domain-containing protein COGs: COG2964 conserved hypothetical protein~InterPro IPR013559~KEGG: adg:Adeg_0108 YheO domain protein~PFAM: YheO-like~SPTR: YheO domain protein%3B~PFAM: YheO-like PAS domain gene gene2613 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2551 Sgly_2552 Sgly_2552 Sgly_2552 2595944 2597083 - peptidase M20 COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase~InterPro IPR002933: IPR011650~KEGG: bbe:BBR47_06280 hypothetical protein~PFAM: Peptidase M20%3B Peptidase M20%2C dimerisation~SPTR: Putative uncharacterized protein%3B~PFAM: Peptidase family M20/M25/M40%3B Peptidase dimerisation domain gene gene2614 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2552 Sgly_2553 Sgly_2553 Sgly_2553 2597106 2599049 - Acylaminoacyl-peptidase COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase~InterPro IPR011659~KEGG: bsu:BSU32230 putative acylaminoacyl-peptidase~PFAM: WD40-like Beta Propeller~PRIAM: Acylaminoacyl-peptidase~SPTR: Uncharacterized peptidase yuxL%3B~PFAM: Prolyl oligopeptidase family%3B WD40-like Beta Propeller Repeat gene gene2615 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2553 Sgly_2554 Sgly_2554 Sgly_2554 2599049 2600080 - oligopeptide/dipeptide ABC transporter%2C ATPase subunit COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase~InterPro IPR003593: IPR003439: IPR013563: IPR010066~KEGG: cob:COB47_1722 oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter-like%3B Oligopeptide/dipeptide ABC transporter%2C C-terminal~PRIAM: Nickel-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Oligopeptide/dipeptide ABC transporter%2C ATPase subunit%3B~TIGRFAM: Oligopeptide/dipeptide ABC transporter%2C ATP-binding protein%2C C-terminal~PFAM: ABC transporter%3B Oligopeptide/dipeptide transporter%2C C-terminal region~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATP-binding protein%2C C-terminal domain gene gene2616 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2554 Sgly_2555 Sgly_2555 Sgly_2555 2600080 2601123 - oligopeptide/dipeptide ABC transporter%2C ATPase subunit COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component~InterPro IPR003593: IPR003439: IPR013563: IPR010066~KEGG: toc:Toce_0617 oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter-like%3B Oligopeptide/dipeptide ABC transporter%2C C-terminal~PRIAM: Nickel-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Oligopeptide/dipeptide ABC transporter%2C ATPase subunit%3B~TIGRFAM: Oligopeptide/dipeptide ABC transporter%2C ATP-binding protein%2C C-terminal~PFAM: ABC transporter%3B Oligopeptide/dipeptide transporter%2C C-terminal region~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATP-binding protein%2C C-terminal domain gene gene2617 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2555 Sgly_2556 Sgly_2556 Sgly_2556 2601165 2602016 - polysaccharide deacetylase COGs: COG0726 xylanase/chitin deacetylase~InterPro IPR002509~KEGG: ara:Arad_8913 polysaccharide deacetylase~PFAM: Polysaccharide deacetylase~SPTR: Polysaccharide deacetylase%3B~PFAM: Polysaccharide deacetylase gene gene2618 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2556 Sgly_2557 Sgly_2557 Sgly_2557 2602030 2602818 - 3-oxoacyl-(acyl-carrier-protein) reductase COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)~InterPro IPR002198~KEGG: ara:Arad_8912 oxidoreductase protein~PFAM: Short-chain dehydrogenase/reductase SDR~PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase~SPTR: Oxidoreductase protein%3B~PFAM: short chain dehydrogenase gene gene2619 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2557 Sgly_2558 Sgly_2558 Sgly_2558 2602834 2603733 - binding-protein-dependent transport systems inner membrane component COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: ara:Arad_8911 dipeptide ABC transporter~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Dipeptide ABC transporter%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2620 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2558 Sgly_2559 Sgly_2559 Sgly_2559 2603730 2604659 - binding-protein-dependent transport systems inner membrane component COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: ara:Arad_8910 peptide ABC transporter~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Peptide ABC transporter%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2621 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2559 Sgly_2560 Sgly_2560 Sgly_2560 2604725 2606254 - extracellular solute-binding protein family 5 COGs: COG0747 ABC-type dipeptide transport system periplasmic component~InterPro IPR000914~KEGG: ara:Arad_9199 dipeptide ABC transporter~PFAM: Bacterial extracellular solute-binding protein%2C family 5~SPTR: Dipeptide ABC transporter%3B~PFAM: Bacterial extracellular solute-binding proteins%2C family 5 Middle gene gene2622 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2560 Sgly_2561 Sgly_2561 Sgly_2561 2606741 2606848 - hypothetical protein SPTR: U5 small nuclear ribonucleoprotein%2C putative gene gene2623 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2561 Sgly_2562 Sgly_2562 Sgly_2562 2607077 2607766 + sortase KEGG: blj:BLD_1458 sortase~SPTR: Putative uncharacterized protein gene gene2624 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2562 Sgly_2563 Sgly_2563 Sgly_2563 2607732 2608373 + helix-turn-helix domain protein InterPro IPR001387~KEGG: bll:BLJ_2022 putative transcriptional regulator~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3~SPTR: Putative uncharacterized protein%3B~PFAM: Helix-turn-helix gene gene2625 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2563 Sgly_2564 Sgly_2564 Sgly_2564 2608377 2608547 + pseudogene gene2626 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2564 Sgly_2565 Sgly_2565 Sgly_2565 2608649 2608750 + pseudogene gene2627 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2565 Sgly_2566 Sgly_2566 Sgly_2566 2608841 2608987 + pseudogene gene2628 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2566 Sgly_2567 Sgly_2567 Sgly_2567 2609375 2610520 + filamentation induced by cAMP protein Fic COGs: COG3177 conserved hypothetical protein~InterPro IPR003812~KEGG: eel:EUBELI_20234 hypothetical protein~PFAM: Filamentation induced by cAMP/death on curing%2C related~SPTR: Putative uncharacterized protein%3B~PFAM: Fic/DOC family gene gene2629 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2567 Sgly_2568 Sgly_2568 Sgly_2568 2610934 2611533 - helix-turn-helix domain protein InterPro IPR001387~KEGG: ssa:SSA_0405 XRE family transcriptional regulator~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3~SPTR: Predicted transcriptional regulators%3B~PFAM: Helix-turn-helix gene gene2630 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2568 Sgly_2569 Sgly_2569 Sgly_2569 2611869 2612321 - hypothetical protein KEGG: dsy:DSY3405 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2631 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2569 Sgly_2570 Sgly_2570 Sgly_2570 2612314 2613468 - AAA ATPase central domain protein COGs: COG0464 ATPase of the AAA+ class~InterPro IPR003593: IPR003959~KEGG: dsy:DSY3406 hypothetical protein~PFAM: ATPase%2C AAA-type%2C core~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ATPase family associated with various cellular activities (AAA) gene gene2632 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2570 Sgly_2571 Sgly_2571 Sgly_2571 2614240 2614845 - Nucleoside-triphosphatase rdgB COGs: COG0127 Xanthosine triphosphate pyrophosphatase~HAMAP: Nucleoside-triphosphatase~InterPro IPR020922: IPR002637~KEGG: dsy:DSY3221 hypothetical protein~PFAM: Ham1-like protein~PRIAM: Nucleoside-triphosphatase~SPTR: Nucleoside-triphosphatase%3B~TIGRFAM: Ham1-like protein~PFAM: Ham1 family~TIGRFAM: non-canonical purine NTP pyrophosphatase%2C rdgB/HAM1 family gene gene2634 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2571 Sgly_2572 Sgly_2572 Sgly_2572 2614896 2615636 - RNAse PH COGs: COG0689 RNase PH~HAMAP: Ribonuclease phosphorolytic%2C bacterial-type~InterPro IPR002381: IPR001247: IPR015847~KEGG: dsy:DSY3222 hypothetical protein~PFAM: Exoribonuclease%2C phosphorolytic domain 1%3B Exoribonuclease%2C phosphorolytic domain 2~PRIAM: tRNA nucleotidyltransferase~SPTR: Ribonuclease PH%3B~TIGRFAM: Ribonuclease phosphorolytic%2C bacterial-type~PFAM: 3' exoribonuclease family%2C domain 1%3B 3' exoribonuclease family%2C domain 2~TIGRFAM: ribonuclease PH gene gene2635 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2572 Sgly_2573 Sgly_2573 Sgly_2573 2615659 2616363 - integral membrane protein TIGR01906 InterPro IPR010178~KEGG: thx:Thet_1883 integral membrane protein TIGR01906~PFAM: Integral membrane protein 1906~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Integral membrane protein 1906~PFAM: Protein of unknown function (DUF1461)~TIGRFAM: integral membrane protein TIGR01906 gene gene2636 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2573 Sgly_2574 Sgly_2574 Sgly_2574 2616417 2617076 - O-methyltransferase family 3 COGs: COG4122 O-methyltransferase~InterPro IPR002935~KEGG: dhd:Dhaf_4391 O-methyltransferase family 3~PFAM: O-methyltransferase%2C family 3~SPTR: O-methyltransferase family 3%3B~PFAM: O-methyltransferase gene gene2637 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2574 Sgly_2575 Sgly_2575 Sgly_2575 2617143 2618705 + RNA methylase%2C NOL1/NOP2/sun family COGs: COG0144 tRNA and rRNA cytosine-C5-methylase~InterPro IPR001678: IPR011023~KEGG: gym:GYMC10_4583 Fmu (Sun) domain protein~PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p~SPTR: NOL1/NOP2/sun family protein%3B~TIGRFAM: Nop2p~PFAM: NOL1/NOP2/sun family~TIGRFAM: NOL1/NOP2/sun family putative RNA methylase gene gene2638 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2575 Sgly_2576 Sgly_2576 Sgly_2576 2618711 2619295 - hydro-lyase%2C Fe-S type%2C tartrate/fumarate subfamily%2C beta subunit COGs: COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I C-terminal domain~InterPro IPR004647~KEGG: dhd:Dhaf_4396 hydro-lyase%2C Fe-S type%2C tartrate/fumarate subfamily%2C beta subunit~PFAM: Fe-S hydro-lyase%2C tartrate dehydratase beta-type%2C catalytic domain~PRIAM: Fumarate hydratase~SPTR: Hydro-lyase%2C Fe-S type%2C tartrate/fumarate subfamily%2C beta subunit%3B~TIGRFAM: Fe-S hydro-lyase%2C tartrate dehydratase beta-type%2C catalytic domain~PFAM: Fumarase C-terminus~TIGRFAM: hydro-lyases%2C Fe-S type%2C tartrate/fumarate subfamily%2C beta region gene gene2639 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2576 Sgly_2577 Sgly_2577 Sgly_2577 2619288 2620151 - fumarase alpha subunit COGs: COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I N-terminal domain~InterPro IPR004646~KEGG: dhd:Dhaf_4397 fumarate hydratase~PFAM: Fe-S hydro-lyase%2C tartrate dehydratase alpha-type%2C catalytic domain~PRIAM: Fumarate hydratase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Fe-S hydro-lyase%2C tartrate dehydratase alpha-type%2C catalytic domain~PFAM: Fumarate hydratase (Fumerase)~TIGRFAM: hydro-lyases%2C Fe-S type%2C tartrate/fumarate subfamily%2C alpha region gene gene2640 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2577 Sgly_2578 Sgly_2578 Sgly_2578 2620180 2621094 - glutamate racemase COGs: COG0796 Glutamate racemase~HAMAP: Glutamate racemase~InterPro IPR004391: IPR015942~KEGG: dsy:DSY3237 hypothetical protein~PFAM: Asp/Glu/hydantoin racemase~PRIAM: Glutamate racemase~SPTR: Glutamate racemase%3B~TIGRFAM: Glutamate racemase~PFAM: Asp/Glu/Hydantoin racemase~TIGRFAM: glutamate racemase gene gene2641 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2578 Sgly_2579 Sgly_2579 Sgly_2579 2621270 2621707 - regulatory protein MarR InterPro IPR000835~KEGG: dhd:Dhaf_4406 transcriptional regulator%2C MarR family~PFAM: HTH transcriptional regulator%2C MarR~SMART: HTH transcriptional regulator%2C MarR~SPTR: Putative uncharacterized protein%3B~PFAM: MarR family gene gene2642 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2579 Sgly_2580 Sgly_2580 Sgly_2580 2621891 2622583 - Lipoprotein LpqB%2C GerMN domain protein InterPro IPR019606~KEGG: dhd:Dhaf_4407 hypothetical protein~PFAM: Lipoprotein LpqB%2C GerMN domain~SPTR: Putative uncharacterized protein%3B~PFAM: Sporulation and spore germination gene gene2643 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2580 Sgly_2581 Sgly_2581 Sgly_2581 2622650 2623252 - stage II sporulation protein R InterPro IPR014202~KEGG: dhd:Dhaf_4409 stage II sporulation protein R~PFAM: Sporulation stage II%2C protein R~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Sporulation stage II%2C protein R~PFAM: Stage II sporulation protein R (spore_II_R)~TIGRFAM: stage II sporulation protein R gene gene2644 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2581 Sgly_2582 Sgly_2582 Sgly_2582 2623383 2624138 + zinc/iron permease COGs: COG0428 divalent heavy-metal cations transporter~InterPro IPR003689~KEGG: dsy:DSY3243 hypothetical protein~PFAM: Zinc/iron permease~SPTR: Putative uncharacterized protein%3B~PFAM: ZIP Zinc transporter gene gene2645 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2582 Sgly_2583 Sgly_2583 Sgly_2583 2624249 2624944 - lipolytic protein G-D-S-L family COGs: COG2755 Lysophospholipase L1 and related esterase~InterPro IPR001087~KEGG: dhd:Dhaf_4411 lipolytic protein G-D-S-L family~PFAM: Lipase%2C GDSL~SPTR: Putative uncharacterized protein%3B~PFAM: GDSL-like Lipase/Acylhydrolase gene gene2646 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2583 Sgly_2584 Sgly_2584 Sgly_2584 2625208 2625486 - hypothetical protein KEGG: tgu:100221545 similar to Nuclear receptor binding SET domain protein 1~SPTR: Chromosome 15 SCAF14992%2C whole genome shotgun sequence gene gene2647 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2584 Sgly_2585 Sgly_2585 Sgly_2585 2625806 2626303 + hypothetical protein KEGG: dhd:Dhaf_4420 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF964) gene gene2648 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2585 Sgly_2586 Sgly_2586 Sgly_2586 2626383 2627237 - hypothetical protein KEGG: dhd:Dhaf_4424 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2649 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2586 Sgly_2587 Sgly_2587 Sgly_2587 2627343 2628014 - cell wall hydrolase SleB COGs: COG3773 Cell wall hydrolyses involved in spore germination~InterPro IPR011105~KEGG: dhd:Dhaf_4425 cell wall hydrolase SleB~PFAM: Cell wall hydrolase%2C SleB~SPTR: Putative uncharacterized protein%3B~PFAM: Cell Wall Hydrolase gene gene2650 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2587 Sgly_2588 Sgly_2588 Sgly_2588 2628128 2629810 - carboxyl-terminal protease COGs: COG0793 Periplasmic protease~InterPro IPR001478: IPR005151: IPR004447~KEGG: dhd:Dhaf_4427 carboxyl-terminal protease~PFAM: Peptidase S41%3B PDZ/DHR/GLGF~SMART: Peptidase S41%3B PDZ/DHR/GLGF~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Peptidase S41A%2C C-terminal peptidase~PFAM: Peptidase family S41%3B PDZ domain (Also known as DHR or GLGF)~TIGRFAM: C-terminal peptidase (prc) gene gene2651 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2588 Sgly_2589 Sgly_2589 Sgly_2589 2629998 2631071 + sporulation integral membrane protein YtvI COGs: COG0628 permease~InterPro IPR002549: IPR014227~KEGG: dhd:Dhaf_2924 sporulation integral membrane protein YtvI~PFAM: Uncharacterised protein family UPF0118~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Sporulation integral membrane protein YtvI~PFAM: Domain of unknown function DUF20~TIGRFAM: sporulation integral membrane protein YtvI gene gene2652 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2589 Sgly_2590 Sgly_2590 Sgly_2590 2631083 2631667 - regulatory protein TetR InterPro IPR001647~KEGG: amt:Amet_0189 TetR family transcriptional regulator~PFAM: Transcription regulator%2C TetR-like%2C DNA-binding%2C bacterial/archaeal~SPTR: Transcriptional regulator%2C TetR family%3B~PFAM: Bacterial regulatory proteins%2C tetR family gene gene2653 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2590 Sgly_2591 Sgly_2591 Sgly_2591 2631735 2634992 - acriflavin resistance protein COGs: COG0841 Cation/multidrug efflux pump~InterPro IPR001036~KEGG: dhd:Dhaf_4520 acriflavin resistance protein~PFAM: Acriflavin resistance protein~SPTR: Acriflavin resistance protein%3B~PFAM: AcrB/AcrD/AcrF family~TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium) gene gene2654 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2591 Sgly_2592 Sgly_2592 Sgly_2592 2634989 2636203 - efflux transporter%2C RND family%2C MFP subunit COGs: COG0845 Membrane-fusion protein~InterPro IPR006143~KEGG: dsy:DSY3360 hypothetical protein~PFAM: Secretion protein HlyD~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Secretion protein HlyD~PFAM: HlyD family secretion protein~TIGRFAM: RND family efflux transporter%2C MFP subunit gene gene2655 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2592 Sgly_2593 Sgly_2593 Sgly_2593 2636446 2636583 - hypothetical protein SPTR: Conserved domain protein gene gene2656 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2593 Sgly_2594 Sgly_2594 Sgly_2594 2636583 2636771 - hypothetical protein KEGG: ecb:100063098 RUN and FYVE domain containing 2~SPTR: Transcription factor gene gene2657 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2594 Sgly_2595 Sgly_2595 Sgly_2595 2636771 2638489 - hypothetical protein KEGG: apr:Apre_0859 hypothetical protein~SPTR: Predicted protein gene gene2658 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2595 Sgly_2596 Sgly_2596 Sgly_2596 2638566 2639732 - RNA-directed DNA polymerase (Reverse transcriptase) InterPro IPR000477~KEGG: drm:Dred_1227 RNA-directed DNA polymerase (reverse transcriptase)~PFAM: RNA-directed DNA polymerase (reverse transcriptase)~SPTR: RNA-directed DNA polymerase%3B~PFAM: Reverse transcriptase (RNA-dependent DNA polymerase) gene gene2659 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2596 Sgly_2597 Sgly_2597 Sgly_2597 2639953 2640288 - hypothetical protein KEGG: drm:Dred_1226 hypothetical protein~SPTR: Predicted protein%3B~PFAM: S23 ribosomal protein gene gene2660 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2597 Sgly_2598 Sgly_2598 Sgly_2598 2640269 2640499 - hypothetical protein KEGG: ath:AT4G04695 CPK31%3B ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase~SPTR: Predicted protein gene gene2661 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2598 Sgly_2599 Sgly_2599 Sgly_2599 2640531 2640845 - hypothetical protein KEGG: bbe:BBR47_53600 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2662 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2599 Sgly_2600 Sgly_2600 Sgly_2600 2640829 2641152 - hypothetical protein KEGG: dae:Dtox_4253 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2663 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2600 Sgly_2601 Sgly_2601 Sgly_2601 2641155 2641994 - hypothetical protein KEGG: pmx:PERMA_1821 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2664 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2601 Sgly_2602 Sgly_2602 Sgly_2602 2641999 2643129 - hypothetical protein COGs: COG3299 Uncharacterized homolog of phage Mu protein gp47~KEGG: pmx:PERMA_1809 hypothetical protein~SPTR: Baseplate J family protein%3B~PFAM: Baseplate J-like protein gene gene2665 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2602 Sgly_2603 Sgly_2603 Sgly_2603 2643122 2643535 - baseplate assembly protein%2C putative KEGG: dvu:DVU1103 baseplate assembly protein%2C putative~SPTR: Predicted protein gene gene2666 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2603 Sgly_2604 Sgly_2604 Sgly_2604 2643535 2643819 - hypothetical protein KEGG: mma:MM_2821 tryptophan synthase subunit alpha~SPTR: Predicted protein gene gene2667 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2604 Sgly_2605 Sgly_2605 Sgly_2605 2643837 2644592 - hypothetical protein KEGG: coc:Coch_0642 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2668 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2605 Sgly_2606 Sgly_2606 Sgly_2606 2644609 2645202 - hypothetical protein KEGG: dvm:DvMF_1299 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2669 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2606 Sgly_2607 Sgly_2607 Sgly_2607 2645205 2647643 - phage tail tape measure protein%2C TP901 family InterPro IPR010090~KEGG: dde:Dde_0934 phage tail tape measure protein TP901%2C core region~PFAM: Phage tail tape measure protein TP901%2C core region~SPTR: Phage tail tape measure protein core region%3B~TIGRFAM: Phage tail tape measure protein TP901%2C core region~PFAM: Phage-related minor tail protein~TIGRFAM: phage tail tape measure protein%2C TP901 family%2C core region gene gene2670 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2607 Sgly_2608 Sgly_2608 Sgly_2608 2647695 2647934 + hypothetical protein SPTR: Predicted protein gene gene2671 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2608 Sgly_2609 Sgly_2609 Sgly_2609 2647951 2648139 - hypothetical protein SPTR: Putative uncharacterized protein gene gene2672 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2609 Sgly_2610 Sgly_2610 Sgly_2610 2648157 2648537 - hypothetical protein KEGG: dvm:DvMF_1296 hypothetical protein~SPTR: Predicted protein gene gene2673 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2610 Sgly_2611 Sgly_2611 Sgly_2611 2648572 2649009 - hypothetical protein KEGG: dvu:DVU1110 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2674 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2611 Sgly_2612 Sgly_2612 Sgly_2612 2649029 2650459 - hypothetical protein KEGG: mrb:Mrub_1955 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF2586) gene gene2675 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2612 Sgly_2613 Sgly_2613 Sgly_2613 2650460 2650678 - hypothetical protein KEGG: dvu:DVU1112 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2676 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2613 Sgly_2614 Sgly_2614 Sgly_2614 2650668 2651180 - hypothetical protein KEGG: pmz:HMPREF0659_A7225 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2677 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2614 Sgly_2615 Sgly_2615 Sgly_2615 2651183 2651683 - phage virion morphogenesis protein COGs: COG5005 Mu-like prophage protein gpG~InterPro IPR006522~KEGG: dde:Dde_3379 phage virion morphogenesis (putative tail completion) protein~SPTR: Phage virion morphogeneis protein%3B~TIGRFAM: Phage virion morphogenesis (putative tail completion) protein~PFAM: Phage virion morphogenesis family~TIGRFAM: phage virion morphogenesis (putative tail completion) protein gene gene2678 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2615 Sgly_2616 Sgly_2616 Sgly_2616 2651684 2652133 - protein of unknown function DUF1320 COGs: COG4387 Mu-like prophage protein gp36~InterPro IPR009752~KEGG: sat:SYN_02296 Mu-like prophage FluMu protein GP36~PFAM: Protein of unknown function DUF1320~SPTR: Predicted protein%3B~PFAM: Protein of unknown function (DUF1320) gene gene2679 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2616 Sgly_2617 Sgly_2617 Sgly_2617 2652148 2653035 - major head subunit protein COGs: COG4397 Mu-like prophage major head subunit gpT~KEGG: ecg:E2348C_2664 predicted major head subunit protein~SPTR: Putative uncharacterized protein%3B~PFAM: Mu-like prophage major head subunit gpT gene gene2680 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2617 Sgly_2618 Sgly_2618 Sgly_2618 2653063 2653473 - hypothetical protein KEGG: mag:amb1767 hypothetical protein~SPTR: Hypothetical cytosolic protein gene gene2681 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2618 Sgly_2619 Sgly_2619 Sgly_2619 2653475 2654530 - Mu-like prophage I protein COGs: COG4388 Mu-like prophage I protein~InterPro IPR019295~KEGG: sat:SYN_02300 Mu-like prophage FluMu I protein~PFAM: Mu-like prophage I protein~SPTR: Putative uncharacterized protein%3B~PFAM: Mu-like prophage I protein gene gene2682 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2619 Sgly_2620 Sgly_2620 Sgly_2620 2654668 2655411 - phage head morphogenesis protein%2C SPP1 gp7 family COGs: COG2369 conserved hypothetical protein homolog of phage Mu protein gp30~InterPro IPR006528~KEGG: dvu:DVU1119 virion morphogenesis protein~PFAM: Phage putative head morphogenesis protein%2C SPP1 gp7~SPTR: Phage putative head morphogenesis protein%2C SPP1 gp7 family%3B~TIGRFAM: Phage putative head morphogenesis protein%2C SPP1 gp7~PFAM: Phage Mu protein F like protein~TIGRFAM: phage putative head morphogenesis protein%2C SPP1 gp7 family gene gene2683 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2620 Sgly_2621 Sgly_2621 Sgly_2621 2655404 2657017 - protein of unknown function DUF935 COGs: COG4383 Mu-like prophage protein gp29~InterPro IPR009279~KEGG: sat:SYN_02303 Mu-like prophage FluMu protein GP29~PFAM: Protein of unknown function DUF935~SPTR: Phage head morphogenesis protein%3B~PFAM: Protein of unknown function (DUF935) gene gene2684 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2621 Sgly_2622 Sgly_2622 Sgly_2622 2657032 2658792 - phage uncharacterized protein InterPro IPR006517~KEGG: dae:Dtox_4228 phage uncharacterized protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Phage uncharacterised protein%2C C-terminal~PFAM: Terminase-like family~TIGRFAM: phage uncharacterized protein (putative large terminase)%2C C-terminal domain gene gene2685 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2622 Sgly_2623 Sgly_2623 Sgly_2623 2658785 2659345 - hypothetical protein KEGG: amt:Amet_1950 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF3486) gene gene2686 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2623 Sgly_2624 Sgly_2624 Sgly_2624 2659345 2659659 - hypothetical protein KEGG: amt:Amet_4370 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2687 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2624 Sgly_2625 Sgly_2625 Sgly_2625 2659664 2659960 - hypothetical protein KEGG: amt:Amet_4371 hypothetical protein~SPTR: Predicted protein gene gene2688 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2625 Sgly_2626 Sgly_2626 Sgly_2626 2659973 2660407 - hypothetical protein KEGG: amt:Amet_4372 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2689 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2626 Sgly_2627 Sgly_2627 Sgly_2627 2660463 2660579 + hypothetical protein gene gene2690 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2627 Sgly_2628 Sgly_2628 Sgly_2628 2660528 2660857 - Mor transcription activator domain protein InterPro IPR014875~KEGG: amt:Amet_4373 hypothetical protein~PFAM: Mor transcription activator~SPTR: Mor transcription activator family%3B~PFAM: Mor transcription activator family gene gene2691 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2628 Sgly_2629 Sgly_2629 Sgly_2629 2660876 2662366 - cell wall hydrolase/autolysin COGs: COG0860 N-acetylmuramoyl-L-alanine amidase~InterPro IPR002508~KEGG: cno:NT01CX_2058 hypothetical protein~PFAM: Cell wall hydrolase/autolysin%2C catalytic~SMART: Cell wall hydrolase/autolysin%2C catalytic~SPTR: N-acetylmuramoyl-L-alanine amidase%3B~PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase%3B N-acetylmuramoyl-L-alanine amidase gene gene2692 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2629 Sgly_2630 Sgly_2630 Sgly_2630 2662379 2662765 - hypothetical protein KEGG: bsb:Bresu_2241 ribosomal protein S21~SPTR: Toxin-antitoxin system%2C toxin component%2C RelE family gene gene2693 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2630 Sgly_2631 Sgly_2631 Sgly_2631 2662740 2663210 - hypothetical protein KEGG: amt:Amet_4387 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1018) gene gene2694 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2631 Sgly_2632 Sgly_2632 Sgly_2632 2663222 2663734 - prophage MuMc02%2C host-nuclease inhibitor protein KEGG: mca:MCA2948 prophage MuMc02%2C host-nuclease inhibitor protein~SPTR: Bacteriophage Mu Gam like protein%3B~PFAM: Bacteriophage Mu Gam like protein gene gene2695 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2632 Sgly_2633 Sgly_2633 Sgly_2633 2663734 2664042 - hypothetical protein KEGG: tel:tlr1124 putative branched chain ABC transporter ATP-binding protein~SPTR: GTP-binding protein engA gene gene2696 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2633 Sgly_2634 Sgly_2634 Sgly_2634 2664063 2665055 - transcriptional regulator%2C XRE family COGs: COG2842 Uncharacterized ATPase putative transposase~KEGG: amt:Amet_4393 hypothetical protein~SPTR: Uncharacterized ATPase%2C putative transposase%3B~PFAM: Helix-turn-helix gene gene2697 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2634 Sgly_2635 Sgly_2635 Sgly_2635 2665055 2667139 - Transposase-like Mu InterPro IPR001584: IPR015378~KEGG: amt:Amet_0388 transposase~PFAM: Transposase-like%2C Mu%2C C-terminal%3B Integrase%2C catalytic core~SPTR: Mu transposase%2C C-superfamily%3B~PFAM: Mu transposase%2C C-terminal%3B Bacteriophage Mu transposase gene gene2698 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2635 Sgly_2636 Sgly_2636 Sgly_2636 2667298 2667609 - hypothetical protein KEGG: tva:TVAG_193760 DNA-directed RNA polymerase%2C omega subunit family protein~SPTR: DNA-directed RNA polymerase%2C omega subunit family protein gene gene2699 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2636 Sgly_2637 Sgly_2637 Sgly_2637 2667623 2667841 - helix-turn-helix domain protein InterPro IPR001387~KEGG: cac:CA_C3639 CRO repressor-like DNA-binding protein~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3~SPTR: CRO repressor-like DNA-binding protein%3B~PFAM: Helix-turn-helix gene gene2700 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2637 Sgly_2638 Sgly_2638 Sgly_2638 2668084 2668365 - hypothetical protein KEGG: dae:Dtox_4208 hypothetical protein~SPTR: Putative uncharacterized protein%3B~manually curated gene gene2701 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2638 Sgly_2639 Sgly_2639 Sgly_2639 2668352 2668594 - hypothetical protein KEGG: bss:BSUW23_09720 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2702 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2639 Sgly_2640 Sgly_2640 Sgly_2640 2668749 2669183 + helix-turn-helix domain protein InterPro IPR001387~KEGG: amt:Amet_4400 XRE family plasmid maintenance system antidote protein~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3~SPTR: Phage transcriptional regulator%3B~PFAM: Helix-turn-helix gene gene2703 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2640 Sgly_2641 Sgly_2641 Sgly_2641 2669861 2670472 + pseudogene gene2704 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2641 Sgly_2642 Sgly_2642 Sgly_2642 2670610 2671512 + NAD-dependent epimerase/dehydratase COGs: COG0451 Nucleoside-diphosphate-sugar epimerase~InterPro IPR001509~KEGG: dhd:Dhaf_4183 NAD-dependent epimerase/dehydratase~PFAM: NAD-dependent epimerase/dehydratase~SPTR: NAD-dependent epimerase/dehydratase%3B~PFAM: NAD dependent epimerase/dehydratase family gene gene2705 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2642 Sgly_2643 Sgly_2643 Sgly_2643 2671530 2672078 + dTDP-4-dehydrorhamnose 3%2C5-epimerase COGs: COG1898 dTDP-4-dehydrorhamnose 3 5-epimerase~InterPro IPR000888~KEGG: cth:Cthe_2560 dTDP-4-dehydrorhamnose 3%2C5-epimerase~PFAM: dTDP-4-dehydrorhamnose 3%2C5-epimerase related~PRIAM: dTDP-4-dehydrorhamnose 3%2C5-epimerase~SPTR: dTDP-4-dehydrorhamnose 3%2C5-epimerase%3B~TIGRFAM: dTDP-4-dehydrorhamnose 3%2C5-epimerase related~PFAM: dTDP-4-dehydrorhamnose 3%2C5-epimerase~TIGRFAM: dTDP-4-dehydrorhamnose 3%2C5-epimerase gene gene2706 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2643 Sgly_2644 Sgly_2644 Sgly_2644 2672139 2672501 - sensory box histidine kinase KEGG: cbh:CLC_0398 sensory box histidine kinase~SPTR: Putative uncharacterized protein gene gene2707 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2644 Sgly_2645 Sgly_2645 Sgly_2645 2672522 2673442 - Radical SAM domain protein InterPro IPR007197~KEGG: cbh:CLC_2585 hypothetical protein~PFAM: Radical SAM~SPTR: Putative uncharacterized protein gene gene2708 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2645 Sgly_2646 Sgly_2646 Sgly_2646 2673807 2674226 + glycosyl transferase family 2 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis~InterPro IPR001173~KEGG: cbi:CLJ_B2953 glycosyl transferase%2C group 2 family protein~PFAM: Glycosyl transferase%2C family 2~SPTR: Glycosyl transferase%2C group 2 family%3B~PFAM: Glycosyl transferase family 2 gene gene2709 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2646 Sgly_2647 Sgly_2647 Sgly_2647 2674228 2674303 - pseudogene gene2710 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2647 Sgly_2648 Sgly_2648 Sgly_2648 2674463 2675242 + MotA/TolQ/ExbB proton channel COGs: COG1291 Flagellar motor component~InterPro IPR002898~KEGG: dsy:DSY3032 hypothetical protein~PFAM: MotA/TolQ/ExbB proton channel~SPTR: Putative uncharacterized protein%3B~PFAM: MotA/TolQ/ExbB proton channel family gene gene2711 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2648 Sgly_2649 Sgly_2649 Sgly_2649 2675256 2676077 + OmpA/MotB domain protein COGs: COG1360 Flagellar motor protein~InterPro IPR006665~KEGG: dhd:Dhaf_4200 OmpA/MotB domain protein~PFAM: Outer membrane protein%2C OmpA/MotB%2C C-terminal~SPTR: Putative uncharacterized protein%3B~PFAM: OmpA family gene gene2712 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2649 Sgly_2650 Sgly_2650 Sgly_2650 2676071 2677108 - peptidase M28 COGs: COG2234 aminopeptidase~InterPro IPR007484~KEGG: dsy:DSY3034 hypothetical protein~PFAM: Peptidase M28~SPTR: Putative uncharacterized protein%3B~PFAM: Peptidase family M28 gene gene2713 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2650 Sgly_2651 Sgly_2651 Sgly_2651 2677140 2677583 + protein of unknown function DUF327 COGs: COG1728 conserved hypothetical protein~InterPro IPR005585~KEGG: dhd:Dhaf_4202 protein of unknown function DUF327~PFAM: Protein of unknown function DUF327~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF327) gene gene2714 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2651 Sgly_2652 Sgly_2652 Sgly_2652 2677636 2678436 + MCP methyltransferase%2C CheR-type COGs: COG1352 Methylase of chemotaxis methyl-accepting protein~InterPro IPR000780~KEGG: dhd:Dhaf_4203 MCP methyltransferase%2C CheR-type~PFAM: MCP methyltransferase%2C CheR-type~PRIAM: Protein-glutamate O-methyltransferase~SMART: MCP methyltransferase%2C CheR-type~SPTR: MCP methyltransferase%2C CheR-type%3B~PFAM: CheR methyltransferase%2C SAM binding domain%3B CheR methyltransferase%2C all-alpha domain gene gene2715 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2652 Sgly_2653 Sgly_2653 Sgly_2653 2678605 2679711 + sporulation integral membrane protein YtvI COGs: COG0628 permease~InterPro IPR002549: IPR014227~KEGG: dhd:Dhaf_2924 sporulation integral membrane protein YtvI~PFAM: Uncharacterised protein family UPF0118~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Sporulation integral membrane protein YtvI~PFAM: Domain of unknown function DUF20~TIGRFAM: sporulation integral membrane protein YtvI gene gene2716 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2653 Sgly_2654 Sgly_2654 Sgly_2654 2679762 2680775 - Phosphonate-transporting ATPase COGs: COG4586 ABC-type uncharacterized transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: pjd:Pjdr2_3171 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Phosphonate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter%2C ATP-binding protein%3B~PFAM: ABC transporter gene gene2717 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2654 Sgly_2655 Sgly_2655 Sgly_2655 2680726 2681574 - protein of unknown function DUF990 COGs: COG3694 ABC-type uncharacterized transport system permease component~InterPro IPR010390~KEGG: pjd:Pjdr2_0630 protein of unknown function DUF990~PFAM: Protein of unknown function DUF990~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF990) gene gene2718 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2655 Sgly_2656 Sgly_2656 Sgly_2656 2681564 2682331 - hypothetical protein KEGG: bcg:BCG9842_B3394 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2719 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2656 Sgly_2657 Sgly_2657 Sgly_2657 2682426 2682629 - hypothetical protein KEGG: spu:373313 fibropellin I gene gene2720 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2657 Sgly_2658 Sgly_2658 Sgly_2658 2682818 2683027 - helix-turn-helix domain protein InterPro IPR001387~KEGG: dhd:Dhaf_1442 transcriptional regulator%2C XRE family~PFAM: Helix-turn-helix type 3~SPTR: Transcriptional regulator%2C XRE family%3B~PFAM: Helix-turn-helix gene gene2721 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2658 Sgly_2659 Sgly_2659 Sgly_2659 2683024 2683360 - pseudogene gene2722 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2659 Sgly_2660 Sgly_2660 Sgly_2660 2683415 2683840 - Uncharacterized protein family UPF0150 InterPro IPR005357~KEGG: swo:Swol_1660 hypothetical protein~PFAM: Uncharacterised protein family UPF0150~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterised protein family (UPF0150) gene gene2723 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2660 Sgly_2661 Sgly_2661 Sgly_2661 2683908 2684063 - YcfA family protein InterPro IPR012933~KEGG: swo:Swol_1661 hypothetical protein~PFAM: YcfA-like~SPTR: Putative uncharacterized protein%3B~PFAM: YcfA-like protein gene gene2724 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2661 Sgly_2662 Sgly_2662 Sgly_2662 2684241 2685137 + integrase family protein InterPro IPR002104~KEGG: shi:Shel_19160 site-specific recombinase XerD~PFAM: Integrase%2C catalytic core%2C phage~SPTR: Integrase%3B~PFAM: Phage integrase family gene gene2725 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2662 Sgly_2663 Sgly_2663 Sgly_2663 2685360 2685677 - helix-turn-helix domain protein InterPro IPR001387~KEGG: dhd:Dhaf_1442 transcriptional regulator%2C XRE family~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3~SPTR: Transcriptional regulator%2C XRE family%3B~PFAM: Helix-turn-helix gene gene2726 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2663 Sgly_2664 Sgly_2664 Sgly_2664 2685679 2686038 - protein of unknown function DUF891 COGs: COG4679 Phage-related protein~InterPro IPR009241~KEGG: dhd:Dhaf_1441 protein of unknown function DUF891~PFAM: Protein of unknown function DUF891~SPTR: Putative uncharacterized protein%3B~PFAM: Phage derived protein Gp49-like (DUF891) gene gene2727 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2664 Sgly_2665 Sgly_2665 Sgly_2665 2686105 2686308 - hypothetical protein KEGG: cth:Cthe_1655 hypothetical protein~SPTR: Cytosine-specific methyltransferase%3B~PFAM: Helix-turn-helix gene gene2728 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2665 Sgly_2666 Sgly_2666 Sgly_2666 2686714 2687091 + hypothetical protein KEGG: ele:Elen_2592 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2729 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2666 Sgly_2667 Sgly_2667 Sgly_2667 2687088 2687681 + hypothetical protein KEGG: pfh:PFHG_02356 conserved hypothetical protein~SPTR: Putative uncharacterized protein gene gene2730 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2667 Sgly_2668 Sgly_2668 Sgly_2668 2687668 2688441 + pseudogene gene2731 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2668 Sgly_2669 Sgly_2669 Sgly_2669 2688541 2690073 - GMP synthase (glutamine-hydrolyzing) COGs: COG0519 GMP synthase PP-ATPase domain/subunit~HAMAP: GMP synthase [glutamine-hydrolyzing]~InterPro IPR000991: IPR001674: IPR004739~KEGG: dhd:Dhaf_1438 GMP synthase~PFAM: GMP synthase%2C C-terminal%3B Glutamine amidotransferase class-I%2C C-terminal~PRIAM: GMP synthase (glutamine-hydrolyzing)~SPTR: GMP synthase%2C large subunit%3B~TIGRFAM: GMP synthase%2C C-terminal%3B GMP synthase%2C N-terminal~PFAM: Glutamine amidotransferase class-I%3B GMP synthase C terminal domain%3B NAD synthase~TIGRFAM: GMP synthase (glutamine-hydrolyzing)%2C C-terminal domain or B subunit%3B GMP synthase (glutamine-hydrolyzing)%2C N-terminal domain or A subunit gene gene2732 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2669 Sgly_2670 Sgly_2670 Sgly_2670 2690144 2690689 - hypoxanthine phosphoribosyltransferase COGs: COG0634 Hypoxanthine-guanine phosphoribosyltransferase~InterPro IPR000836: IPR005904~KEGG: dhd:Dhaf_1437 hypoxanthine phosphoribosyltransferase~PFAM: Phosphoribosyltransferase~PRIAM: Hypoxanthine phosphoribosyltransferase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Hypoxanthine phosphoribosyl transferase~PFAM: Phosphoribosyl transferase domain~TIGRFAM: hypoxanthine phosphoribosyltransferase gene gene2733 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2670 Sgly_2671 Sgly_2671 Sgly_2671 2690843 2691511 - hypothetical protein KEGG: dhd:Dhaf_1436 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2734 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2671 Sgly_2672 Sgly_2672 Sgly_2672 2691772 2693385 + ABC transporter related protein COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains~InterPro IPR003593: IPR003439~KEGG: drm:Dred_1485 ABC transporter related~PFAM: ABC transporter-like~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ABC transporter gene gene2735 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2672 Sgly_2673 Sgly_2673 Sgly_2673 2693647 2693814 - pseudogene gene2736 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2673 Sgly_2674 Sgly_2674 Sgly_2674 2693943 2694323 - hypothetical protein KEGG: bts:Btus_0359 hypothetical protein~SPTR: Predicted protein gene gene2737 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2674 Sgly_2675 Sgly_2675 Sgly_2675 2694560 2694805 + pseudogene gene2738 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2675 Sgly_2676 Sgly_2676 Sgly_2676 2694896 2696539 - 60 kDa chaperonin COGs: COG0459 Chaperonin GroEL (HSP60 family)~HAMAP: Chaperonin Cpn60~InterPro IPR001844: IPR002423~KEGG: dsy:DSY3960 chaperonin GroEL~PFAM: Chaperonin Cpn60/TCP-1~SPTR: 60 kDa chaperonin%3B~TIGRFAM: Chaperonin Cpn60~PFAM: TCP-1/cpn60 chaperonin family~TIGRFAM: chaperonin GroL gene gene2739 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2676 Sgly_2677 Sgly_2677 Sgly_2677 2696606 2696890 - 10 kDa chaperonin COGs: COG0234 Co-chaperonin GroES (HSP10)~HAMAP: Chaperonin Cpn10%2C subgroup~InterPro IPR001476: IPR020818~KEGG: dhd:Dhaf_1405 co-chaperonin GroES~PFAM: Chaperonin Cpn10~SPTR: 10 kDa chaperonin%3B~PFAM: Chaperonin 10 Kd subunit gene gene2740 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2677 Sgly_2678 Sgly_2678 Sgly_2678 2697132 2697542 - hypothetical protein KEGG: sth:STH2955 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2741 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2678 Sgly_2679 Sgly_2679 Sgly_2679 2697572 2697904 - nitrogen regulatory protein P-II COGs: COG0347 Nitrogen regulatory protein PII~InterPro IPR002187~KEGG: tal:Thal_1311 nitrogen regulatory protein P-II~PFAM: Nitrogen regulatory protein PII~SPTR: Nitrogen regulatory protein P-II%3B~PFAM: Nitrogen regulatory protein P-II gene gene2742 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2679 Sgly_2680 Sgly_2680 Sgly_2680 2697891 2698523 - Molybdopterin-guanine dinucleotide biosynthesis protein A COGs: COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A~HAMAP: Molybdopterin-guanine dinucleotide biosynthesis protein A~KEGG: dhd:Dhaf_1399 molybdopterin-guanine dinucleotide biosynthesis protein A~SPTR: Probable molybdopterin-guanine dinucleotide biosynthesis protein A gene gene2743 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2680 Sgly_2681 Sgly_2681 Sgly_2681 2698520 2698777 - glutaredoxin InterPro IPR002109~KEGG: ttr:Tter_0505 glutaredoxin-like protein%2C YruB-family~PFAM: Glutaredoxin~SPTR: Glutaredoxin-like protein%2C YruB-family%3B~PFAM: Glutaredoxin gene gene2744 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2681 Sgly_2682 Sgly_2682 Sgly_2682 2698871 2699704 - degV family protein COGs: COG1307 conserved hypothetical protein~InterPro IPR003797~KEGG: cob:COB47_1913 DegV family protein~PFAM: DegV~SPTR: DegV family protein%3B~TIGRFAM: DegV~PFAM: Uncharacterised protein%2C DegV family COG1307~TIGRFAM: EDD domain protein%2C DegV family gene gene2745 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2682 Sgly_2683 Sgly_2683 Sgly_2683 2699762 2700229 - transcriptional regulator%2C MarR family COGs: COG1846 Transcriptional regulators~InterPro IPR000835~KEGG: cbl:CLK_3078 MarR family transcriptional regulator~PFAM: HTH transcriptional regulator%2C MarR~SMART: HTH transcriptional regulator%2C MarR~SPTR: Transcriptional regulator%2C MarR family%3B~PFAM: MarR family gene gene2746 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2683 Sgly_2684 Sgly_2684 Sgly_2684 2700374 2701198 - protein of unknown function DUF88 KEGG: dhd:Dhaf_1404 protein of unknown function DUF88~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function DUF88 gene gene2747 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2684 Sgly_2685 Sgly_2685 Sgly_2685 2701343 2704027 - NAD-dependent formate dehydrogenase catalytic subunit COGs: COG3383 Uncharacterized anaerobic dehydrogenase~InterPro IPR001041: IPR019574: IPR006963: IPR006656: IPR 006657: IPR006478~KEGG: dhd:Dhaf_1398 formate dehydrogenase%2C alpha subunit~PFAM: Molybdopterin oxidoreductase%3B Molybdopterin oxidoreductase%2C Fe4S4 domain%3B NADH:ubiquinone oxidoreductase%2C subunit G%2C iron-sulphur binding%3B Ferredoxin%3B Molydopterin dinucleotide-binding domain~PRIAM: Nitrate reductase~SPTR: Formate dehydrogenase%2C alpha subunit%3B~TIGRFAM: Formate dehydrogenase%2C alpha subunit~PFAM: Molybdopterin oxidoreductase%3B NADH-ubiquinone oxidoreductase-G iron-sulfur binding region%3B Molydopterin dinucleotide binding domain%3B Molybdopterin oxidoreductase Fe4S4 domain~TIGRFAM: formate dehydrogenase%2C alpha subunit%2C archaeal-type gene gene2748 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2685 Sgly_2686 Sgly_2686 Sgly_2686 2704051 2706003 - NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit~InterPro IPR011538: IPR019554: IPR019575~KEGG: dsy:DSY3970 NADH dehydrogenase I chain F~PFAM: NADH:ubiquinone oxidoreductase%2C 51kDa subunit%3B Soluble ligand binding domain%3B NADH ubiquinone oxidoreductase%2C F subunit%2C iron sulphur binding~PRIAM: NADH dehydrogenase (quinone)~SPTR: NADH dehydrogenase I chain F%3B~PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region%3B 4Fe-4S binding domain%3B Respiratory-chain NADH dehydrogenase 24 Kd subunit%3B Respiratory-chain NADH dehydrogenase 51 Kd subunit%3B SLBB domain gene gene2749 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2686 Sgly_2687 Sgly_2687 Sgly_2687 2706016 2706501 - NADH dehydrogenase subunit E COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit~InterPro IPR002023~KEGG: chy:CHY_0731 Fe-hydrogenase%2C gamma subunit~PFAM: NADH:ubiquinone oxidoreductase%2C 24kDa subunit~PRIAM: NADH dehydrogenase (quinone)~SPTR: Fe-hydrogenase%2C gamma subunit%3B~PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit gene gene2750 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2687 Sgly_2688 Sgly_2688 Sgly_2688 2706548 2707123 - 5-formyltetrahydrofolate cyclo-ligase COGs: COG0212 5-formyltetrahydrofolate cyclo-ligase~InterPro IPR002698~KEGG: dhd:Dhaf_1395 5-formyltetrahydrofolate cyclo-ligase~PFAM: 5-formyltetrahydrofolate cyclo-ligase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase~PFAM: 5-formyltetrahydrofolate cyclo-ligase family~TIGRFAM: 5%2C10-methenyltetrahydrofolate synthetase gene gene2751 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2688 Sgly_2689 Sgly_2689 Sgly_2689 2707460 2708479 - O-sialoglycoprotein endopeptidase COGs: COG0533 Metal-dependent protease with possible chaperone activity~HAMAP: O-sialoglycoprotein endopeptidase~InterPro IPR000905: IPR017861~KEGG: dhd:Dhaf_1393 putative DNA-binding/iron metalloprotein/AP endonuclease~PFAM: Peptidase M22%2C glycoprotease~PRIAM: O-sialoglycoprotein endopeptidase~SPTR: Metalloendopeptidase%2C glycoprotease family%3B~TIGRFAM: putative glycoprotease GCP%3B Peptidase M22%2C glycoprotease%2C subgroup~PFAM: Glycoprotease family~TIGRFAM: putative glycoprotease GCP%3B metallohydrolase%2C glycoprotease/Kae1 family gene gene2752 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2689 Sgly_2690 Sgly_2690 Sgly_2690 2708510 2709001 - (SSU ribosomal protein S18P)-alanine acetyltransferase COGs: COG0456 Acetyltransferase~InterPro IPR000182: IPR006464~KEGG: dhd:Dhaf_1392 ribosomal-protein-alanine acetyltransferase~PFAM: GCN5-related N-acetyltransferase~PRIAM: Ribosomal-protein-alanine N-acetyltransferase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Ribosomal-protein-alanine acetyltransferase~PFAM: Acetyltransferase (GNAT) family~TIGRFAM: ribosomal-protein-alanine acetyltransferase gene gene2753 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2690 Sgly_2691 Sgly_2691 Sgly_2691 2709013 2709765 - universal protein YeaZ COGs: COG1214 Inactive homolog of metal-dependent protease putative molecular chaperone~InterPro IPR000905~KEGG: dhd:Dhaf_1391 peptidase M22 glycoprotease~PFAM: Peptidase M22%2C glycoprotease~SPTR: Putative uncharacterized protein%3B~TIGRFAM: universal protein YeaZ~PFAM: Glycoprotease family~TIGRFAM: universal bacterial protein YeaZ gene gene2754 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2691 Sgly_2692 Sgly_2692 Sgly_2692 2709831 2710292 - Uncharacterized protein family UPF0079%2C ATPase COGs: COG0802 ATPase or kinase~InterPro IPR003442~KEGG: dhd:Dhaf_1390 protein of unknown function UPF0079~PFAM: Uncharacterised protein family UPF0079%2C ATPase bacteria~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Uncharacterised protein family UPF0079%2C ATPase bacteria~PFAM: Uncharacterised P-loop hydrolase UPF0079~TIGRFAM: ATPase%2C YjeE family gene gene2755 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2692 Sgly_2693 Sgly_2693 Sgly_2693 2710298 2711545 - amidohydrolase COGs: COG1228 Imidazolonepropionase and related amidohydrolase~InterPro IPR006680~KEGG: dsy:DSY3978 hypothetical protein~PFAM: Amidohydrolase 1~SPTR: Putative uncharacterized protein%3B~PFAM: Amidohydrolase family gene gene2756 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2693 Sgly_2694 Sgly_2694 Sgly_2694 2711711 2712061 - transcriptional modulator of MazE/toxin%2C MazF COGs: COG2337 Growth inhibitor~InterPro IPR003477~KEGG: dhd:Dhaf_1348 transcriptional modulator of MazE/toxin%2C MazF~PFAM: PemK-like protein~SPTR: Putative uncharacterized protein%3B~PFAM: PemK-like protein gene gene2757 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2694 Sgly_2695 Sgly_2695 Sgly_2695 2712051 2712338 - transcriptional regulator%2C CopG family KEGG: dhd:Dhaf_1347 putative transcriptional regulator%2C CopG family~SPTR: Putative uncharacterized protein gene gene2758 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2695 Sgly_2696 Sgly_2696 Sgly_2696 2712487 2713221 - CobB/CobQ domain protein glutamine amidotransferase COGs: COG3442 glutamine amidotransferase~InterPro IPR011698~KEGG: dhd:Dhaf_1346 CobB/CobQ domain protein glutamine amidotransferase~PFAM: CobB/CobQ-like glutamine amidotransferase~SPTR: Putative uncharacterized protein%3B~PFAM: CobB/CobQ-like glutamine amidotransferase domain gene gene2759 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2696 Sgly_2697 Sgly_2697 Sgly_2697 2713218 2714618 - domain of unknown function DUF1727 COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase~InterPro IPR013221: IPR013564~KEGG: dsy:DSY4019 hypothetical protein~PFAM: Domain of unknown function DUF1727%3B Mur ligase%2C central~SPTR: Putative uncharacterized protein%3B~PFAM: Domain of unknown function (DUF1727)%3B Mur ligase middle domain gene gene2760 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2697 Sgly_2698 Sgly_2698 Sgly_2698 2714908 2715423 + transferase hexapeptide repeat containing protein COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily~InterPro IPR001451~KEGG: dsy:DSY4021 hypothetical protein~PFAM: Bacterial transferase hexapeptide repeat~SPTR: Putative uncharacterized protein gene gene2761 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2698 Sgly_2699 Sgly_2699 Sgly_2699 2715608 2716234 - metal dependent phosphohydrolase COGs: COG2206 HD-GYP domain~InterPro IPR003607: IPR006674~KEGG: thx:Thet_1770 metal dependent phosphohydrolase~PFAM: Metal-dependent phosphohydrolase%2C HD subdomain~SMART: Metal-dependent phosphohydrolase%2C HD domain~SPTR: Metal dependent phosphohydrolase%3B~PFAM: HD domain~TIGRFAM: uncharacterized domain HDIG gene gene2762 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2699 Sgly_2700 Sgly_2700 Sgly_2700 2716244 2716552 - hypothetical protein KEGG: dhd:Dhaf_4685 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterized protein conserved in bacteria (DUF2325) gene gene2763 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2700 Sgly_2701 Sgly_2701 Sgly_2701 2716848 2718332 - glutamate synthase (NADH) small subunit COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase~InterPro IPR013027: IPR006005~KEGG: dae:Dtox_3757 glutamate synthase%2C NADH/NADPH%2C small subunit~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~PRIAM: Glutamate synthase (NADH)~SPTR: Glutamate synthase%2C NADH/NADPH%2C small subunit%3B~TIGRFAM: Glutamate synthase%2C NADH/NADPH%2C small subunit 1~PFAM: Pyridine nucleotide-disulphide oxidoreductase~TIGRFAM: glutamate synthases%2C NADH/NADPH%2C small subunit gene gene2764 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2701 Sgly_2702 Sgly_2702 Sgly_2702 2718372 2722928 - glutamate synthase (NADH) large subunit COGs: COG0069 Glutamate synthase domain 2~InterPro IPR000583: IPR006982: IPR002932: IPR002489~KEGG: dae:Dtox_3758 glutamate synthase (ferredoxin)~PFAM: Glutamate synthase%2C central-C%3B Glutamine amidotransferase%2C class-II%3B Glutamate synthase%2C central-N%3B Glutamate synthase%2C alpha subunit%2C C-terminal~PRIAM: Glutamate synthase (ferredoxin)~SPTR: Glutamate synthase (Ferredoxin)%3B~PFAM: Conserved region in glutamate synthase%3B GXGXG motif%3B Glutamate synthase central domain%3B Glutamine amidotransferases class-II gene gene2765 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2702 Sgly_2703 Sgly_2703 Sgly_2703 2723233 2724363 - alanine racemase COGs: COG0787 Alanine racemase~HAMAP: Alanine racemase~InterPro IPR000821: IPR001608: IPR011079~KEGG: dhd:Dhaf_1342 alanine racemase~PFAM: Alanine racemase%2C N-terminal%3B Alanine racemase%2C C-terminal~PRIAM: Alanine racemase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Alanine racemase~PFAM: Alanine racemase%2C C-terminal domain%3B Alanine racemase%2C N-terminal domain~TIGRFAM: alanine racemase gene gene2766 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2703 Sgly_2704 Sgly_2704 Sgly_2704 2724395 2725966 - YjeF-related protein COGs: COG0063 sugar kinase~InterPro IPR004443: IPR000631~KEGG: dsy:DSY4023 hypothetical protein~PFAM: YjeF-related protein%2C N-terminal%3B Uncharacterised protein family%2C carbohydrate kinase-related~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Uncharacterised protein family%2C carbohydrate kinase-related%3B YjeF-related protein%2C N-terminal~PFAM: YjeF-related protein N-terminus%3B Carbohydrate kinase~TIGRFAM: yjeF N-terminal region%3B yjeF C-terminal region%2C hydroxyethylthiazole kinase-related gene gene2767 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2704 Sgly_2705 Sgly_2705 Sgly_2705 2725987 2726343 - Holo-(acyl-carrier-protein) synthase COGs: COG0736 Phosphopantetheinyl transferase (holo-ACP synthase)~HAMAP: Holo-[acyl-carrier-protein] synthase~InterPro IPR008278: IPR002582: IPR004568~KEGG: dhd:Dhaf_1340 holo-acyl-carrier-protein synthase~PFAM: 4'-phosphopantetheinyl transferase~SPTR: Holo-[acyl-carrier-protein] synthase%3B~TIGRFAM: Phosphopantethiene-protein transferase%3B Holo-[acyl carrier protein] synthase~PFAM: 4'-phosphopantetheinyl transferase superfamily~TIGRFAM: phosphopantethiene--protein transferase domain%3B holo-[acyl-carrier-protein] synthase gene gene2768 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2705 Sgly_2706 Sgly_2706 Sgly_2706 2726427 2727149 - transcriptional regulator%2C GntR family COGs: COG2188 Transcriptional regulators~InterPro IPR000524: IPR006037~KEGG: dhd:Dhaf_1338 transcriptional regulator%2C GntR family~PFAM: Regulator of K+ conductance%2C C-terminal%3B HTH transcriptional regulator%2C GntR~SMART: HTH transcriptional regulator%2C GntR~SPTR: Putative uncharacterized protein%3B~PFAM: Bacterial regulatory proteins%2C gntR family%3B TrkA-C domain gene gene2769 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2706 Sgly_2707 Sgly_2707 Sgly_2707 2727309 2728559 + glutamate 2%2C3-aminomutase COGs: COG1509 Lysine 2 3-aminomutase~InterPro IPR007197: IPR003739~KEGG: dhd:Dhaf_1337 lysine 2%2C3-aminomutase YodO family protein~PFAM: Radical SAM~PRIAM: Lysine 2%2C3-aminomutase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Protein of unknown function DUF160~PFAM: Lysine-2%2C3-aminomutase~TIGRFAM: KamA family protein gene gene2770 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2707 Sgly_2708 Sgly_2708 Sgly_2708 2728544 2729482 - Conserved hypothetical protein CHP01212 COGs: COG1242 Fe-S oxidoreductase~InterPro IPR006638: IPR007197: IPR005911~KEGG: bha:BH3284 hypothetical protein~PFAM: Radical SAM~SMART: Elongator protein 3/MiaB/NifB~SPTR: BH3284 protein%3B~TIGRFAM: Conserved hypothetical protein CHP01212~PFAM: Radical SAM superfamily~TIGRFAM: radical SAM protein%2C TIGR01212 family gene gene2771 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2708 Sgly_2709 Sgly_2709 Sgly_2709 2729651 2731873 + diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain~InterPro IPR000014: IPR001610: IPR000160: IPR001633: IPR 013767~KEGG: tjr:TherJR_0997 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)~PFAM: Diguanylate phosphodiesterase%2C predicted%3B Diguanylate cyclase%2C predicted%3B PAS fold~SMART: Diguanylate phosphodiesterase%2C predicted%3B Diguanylate cyclase%2C predicted%3B PAC motif%3B PAS~SPTR: Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S)%3B~TIGRFAM: Diguanylate cyclase%2C predicted%3B PAS~PFAM: EAL domain%3B GGDEF domain%3B PAS fold~TIGRFAM: PAS domain S-box%3B diguanylate cyclase (GGDEF) domain gene gene2772 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2709 Sgly_2710 Sgly_2710 Sgly_2710 2731977 2733230 - ammonium transporter COGs: COG0004 Ammonia permease~InterPro IPR001905~KEGG: drm:Dred_2862 ammonium transporter~PFAM: Ammonium transporter~SPTR: Ammonium transporter%3B~TIGRFAM: Ammonium transporter~PFAM: Ammonium Transporter Family~TIGRFAM: ammonium transporter%3B (TC 1.A.11 gene gene2773 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2710 Sgly_2711 Sgly_2711 Sgly_2711 2733430 2734692 - AMMECR1 domain protein COGs: COG2078 conserved hypothetical protein~InterPro IPR004183: IPR002733~KEGG: dsy:DSY1550 hypothetical protein~PFAM: AMMECR1%3B Extradiol ring-cleavage dioxygenase%2C class III enzyme%2C subunit B~SPTR: Putative uncharacterized protein%3B~TIGRFAM: AMMECR1~PFAM: AMMECR1%3B Catalytic LigB subunit of aromatic ring-opening dioxygenase~TIGRFAM: uncharacterized protein%2C PH0010 family gene gene2774 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2711 Sgly_2712 Sgly_2712 Sgly_2712 2735137 2737227 + glutamine synthetase catalytic region COGs: COG3968 Uncharacterized protein related to glutamine synthetase~InterPro IPR008146~KEGG: tit:Thit_1275 glutamine synthetase catalytic region~PFAM: Glutamine synthetase%2C catalytic domain~SPTR: Glutamine synthetase catalytic region%3B~PFAM: Glutamine synthetase%2C catalytic domain%3B Glutamine synthetase type III N terminal gene gene2775 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2712 Sgly_2713 Sgly_2713 Sgly_2713 2737265 2737366 - hypothetical protein gene gene2776 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2713 Sgly_2714 Sgly_2714 Sgly_2714 2737351 2737872 - UPF0316 protein COGs: COG4843 conserved hypothetical protein~HAMAP: UPF0316 protein~InterPro IPR019264~KEGG: dhd:Dhaf_3052 hypothetical protein~PFAM: Protein of unknown function DUF2179~SPTR: UPF0316 protein Dhaf_3052%3B~PFAM: Uncharacterized protein conserved in bacteria (DUF2179) gene gene2777 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2714 Sgly_2715 Sgly_2715 Sgly_2715 2738224 2738478 + hypothetical protein KEGG: cdl:CDR20291_2059 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2778 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2715 Sgly_2716 Sgly_2716 Sgly_2716 2738774 2740237 + iron-only hydrogenase maturation protein HydG COGs: COG1060 Thiamine biosynthesis protein ThiH~InterPro IPR007197: IPR010722~KEGG: slp:Slip_0120 biotin and thiamin synthesis associated~PFAM: Biotin/thiamin synthesis-associated protein%3B Radical SAM~SPTR: Biotin and thiamin synthesis associated%3B~PFAM: Radical SAM superfamily%3B Biotin and Thiamin Synthesis associated domain~TIGRFAM: thiazole biosynthesis protein ThiH gene gene2779 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2716 Sgly_2717 Sgly_2717 Sgly_2717 2740360 2741763 + fumarase COGs: COG1027 Aspartate ammonia-lyase~InterPro IPR000362: IPR018951~KEGG: pth:PTH_0981 aspartate ammonia-lyase~PFAM: Fumarate lyase%3B Fumarase C%2C C-terminal~PRIAM: Aspartate ammonia-lyase~SPTR: Aspartate ammonia-lyase%3B~PFAM: Fumarase C C-terminus%3B Lyase~TIGRFAM: aspartate ammonia-lyase gene gene2780 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2717 Sgly_2718 Sgly_2718 Sgly_2718 2741792 2743045 + iron-only hydrogenase maturation protein HydF COGs: COG1160 GTPase~InterPro IPR002917: IPR005225~KEGG: pth:PTH_0982 GTPase~PFAM: GTP-binding protein%2C HSR1-related~SPTR: Predicted GTPase%3B~TIGRFAM: Small GTP-binding protein~PFAM: GTPase of unknown function~TIGRFAM: small GTP-binding protein domain gene gene2781 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2718 Sgly_2719 Sgly_2719 Sgly_2719 2743030 2743710 - two component transcriptional regulator%2C LuxR family COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain~InterPro IPR001789: IPR000792~KEGG: dhd:Dhaf_0100 two component transcriptional regulator%2C LuxR family~PFAM: Transcription regulator LuxR%2C C-terminal%3B Signal transduction response regulator%2C receiver domain~SMART: Transcription regulator LuxR%2C C-terminal%3B Signal transduction response regulator%2C receiver domain~SPTR: Two component transcriptional regulator%2C LuxR family%3B~PFAM: Response regulator receiver domain%3B Bacterial regulatory proteins%2C luxR family gene gene2782 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2719 Sgly_2720 Sgly_2720 Sgly_2720 2743769 2746129 - putative signal transduction histidine kinase COGs: COG4585 Signal transduction histidine kinase~InterPro IPR003594~KEGG: dhd:Dhaf_0099 histidine kinase~PFAM: ATPase-like%2C ATP-binding domain~SPTR: Histidine kinase gene gene2783 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2720 Sgly_2721 Sgly_2721 Sgly_2721 2746110 2747051 - Polyprenyl synthetase COGs: COG0142 Geranylgeranyl pyrophosphate synthase~InterPro IPR000092~KEGG: dhd:Dhaf_0098 geranylgeranyl pyrophosphate synthase-like protein~PFAM: Polyprenyl synthetase~SPTR: Putative uncharacterized protein%3B~PFAM: Polyprenyl synthetase gene gene2784 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2721 Sgly_2722 Sgly_2722 Sgly_2722 2747059 2747253 - hypothetical protein KEGG: dhd:Dhaf_0097 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2785 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2722 Sgly_2723 Sgly_2723 Sgly_2723 2747490 2747876 - hypothetical protein KEGG: dae:Dtox_2519 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2786 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2723 Sgly_2724 Sgly_2724 Sgly_2724 2747895 2748257 - Protein of unknown function DUF2089 COGs: COG3877 conserved hypothetical protein~InterPro IPR018658~KEGG: aoe:Clos_0021 hypothetical protein~PFAM: Protein of unknown function DUF2089~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function(DUF2089) gene gene2787 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2724 Sgly_2725 Sgly_2725 Sgly_2725 2749093 2749761 - anaerobic ribonucleoside-triphosphate reductase activating protein COGs: COG1180 Pyruvate-formate lyase-activating enzyme~InterPro IPR007197: IPR012840~KEGG: bpb:bpr_III031 anaerobic ribonucleoside triphosphate reductase activating protein NrdG2~PFAM: Radical SAM~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Ribonucleoside-triphosphate reductase%2C anaerobic-like~PFAM: Radical SAM superfamily~TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein gene gene2788 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2725 Sgly_2726 Sgly_2726 Sgly_2726 2749774 2751897 - anaerobic ribonucleoside-triphosphate reductase COGs: COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase~InterPro IPR005144: IPR012833~KEGG: thx:Thet_1768 anaerobic ribonucleoside-triphosphate reductase~PFAM: ATP-cone~SPTR: Anaerobic ribonucleoside-triphosphate reductase%3B~TIGRFAM: Ribonucleoside-triphosphate reductase%2C anaerobic~PFAM: ATP cone domain~TIGRFAM: anaerobic ribonucleoside-triphosphate reductase gene gene2789 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2726 Sgly_2727 Sgly_2727 Sgly_2727 2751930 2752394 - Transcriptional repressor nrdR COGs: COG1327 transcriptional regulator protein consists of a Zn-ribbon and ATP-cone domains~HAMAP: Ribonucleotide reductase regulator NrdR-like~InterPro IPR003796: IPR005144~KEGG: dhd:Dhaf_0266 transcriptional regulator NrdR~PFAM: ATP-cone~SPTR: Transcriptional repressor nrdR%3B~TIGRFAM: Ribonucleotide reductase regulator NrdR-like~PFAM: ATP cone domain~TIGRFAM: transcriptional regulator NrdR gene gene2790 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2727 Sgly_2728 Sgly_2728 Sgly_2728 2752708 2755275 + alcohol dehydrogenase AdhE%3B acetaldehyde dehydrogenase COGs: COG1454 Alcohol dehydrogenase class IV~InterPro IPR001670~KEGG: afl:Aflv_2814 bifunctional acetaldehyde-CoA/alcohol dehydrogenase~PFAM: Alcohol dehydrogenase%2C iron-type~PRIAM: Acetaldehyde dehydrogenase (acetylating)~SPTR: Iron-containing alcohol dehydrogenase%3B~PFAM: Aldehyde dehydrogenase family%3B Iron-containing alcohol dehydrogenase gene gene2791 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2728 Sgly_2729 Sgly_2729 Sgly_2729 2755376 2756146 + hypothetical protein KEGG: hsa:100128719 hypothetical LOC100128719~SPTR: Putative uncharacterized protein gene gene2792 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2729 Sgly_2730 Sgly_2730 Sgly_2730 2756235 2757380 - hypothetical protein KEGG: dhd:Dhaf_2837 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2793 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2730 Sgly_2731 Sgly_2731 Sgly_2731 2757373 2757876 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog~InterPro IPR007627: IPR013249: IPR014284~KEGG: dhd:Dhaf_2838 RNA polymerase%2C sigma-24 subunit%2C ECF subfamily~PFAM: RNA polymerase sigma-70 region 2%3B RNA polymerase sigma factor 70%2C region 4 type 2~SPTR: RNA polymerase%2C sigma-24 subunit%2C ECF subfamily%3B~TIGRFAM: RNA polymerase sigma-70~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family gene gene2794 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2731 Sgly_2732 Sgly_2732 Sgly_2732 2758151 2759035 - pyridoxal phosphate synthase yaaD subunit COGs: COG0214 Pyridoxine biosynthesis enzyme~HAMAP: Vitamin B6 biosynthesis protein~InterPro IPR001852~KEGG: tjr:TherJR_0010 pyridoxine biosynthesis protein~PFAM: Vitamin B6 biosynthesis protein~SPTR: Pyridoxal biosynthesis lyase pdxS%3B~TIGRFAM: Vitamin B6 biosynthesis protein~PFAM: SOR/SNZ family~TIGRFAM: pyridoxal 5'-phosphate synthase%2C synthase subunit Pdx1 gene gene2795 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2732 Sgly_2733 Sgly_2733 Sgly_2733 2759093 2760022 - cysteine synthase COGs: COG0031 Cysteine synthase~InterPro IPR001926: IPR005856: IPR005859~KEGG: gur:Gura_3859 cysteine synthase A~PFAM: Pyridoxal phosphate-dependent enzyme%2C beta subunit~PRIAM: Cysteine synthase~SPTR: Cysteine synthase%3B~TIGRFAM: Cysteine synthase A%3B Cysteine synthase K/M~PFAM: Pyridoxal-phosphate dependent enzyme~TIGRFAM: cysteine synthase A%3B cysteine synthases gene gene2796 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2733 Sgly_2734 Sgly_2734 Sgly_2734 2760143 2761072 - cysteine synthase COGs: COG0031 Cysteine synthase~InterPro IPR001926: IPR005856: IPR005859~KEGG: pth:PTH_0247 cysteine synthase~PFAM: Pyridoxal phosphate-dependent enzyme%2C beta subunit~PRIAM: Cysteine synthase~SPTR: Cysteine synthase%3B~TIGRFAM: Cysteine synthase A%3B Cysteine synthase K/M~PFAM: Pyridoxal-phosphate dependent enzyme~TIGRFAM: cysteine synthase A%3B cysteine synthases gene gene2797 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2734 Sgly_2735 Sgly_2735 Sgly_2735 2761276 2762538 - major facilitator superfamily MFS_1 COGs: COG2814 Arabinose efflux permease~InterPro IPR011701~KEGG: ccb:Clocel_1141 hypothetical protein~PFAM: Major facilitator superfamily MFS-1~SPTR: Putative uncharacterized protein%3B~PFAM: Bacterial protein of unknown function (DUF894) gene gene2798 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2735 Sgly_2736 Sgly_2736 Sgly_2736 2762552 2763727 - GCN5-related N-acetyltransferase COGs: COG4552 acetyltransferase involved in intracellular survival and related acetyltransferase~InterPro IPR000182~KEGG: cyc:PCC7424_5250 GCN5-related N-acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: GCN5-related N-acetyltransferase%3B~PFAM: Acetyltransferase (GNAT) family gene gene2799 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2736 Sgly_2737 Sgly_2737 Sgly_2737 2763803 2764372 - nitroreductase COGs: COG0778 Nitroreductase~InterPro IPR000415~KEGG: hmo:HM1_3019 nitroreductase family protein~PFAM: Nitroreductase-like~SPTR: Nitroreductase family protein%3B~PFAM: Nitroreductase family gene gene2800 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2737 Sgly_2738 Sgly_2738 Sgly_2738 2764785 2765351 + putative cytoplasmic protein COGs: COG1751 conserved hypothetical protein~KEGG: dae:Dtox_0888 putative cytoplasmic protein~SPTR: Putative cytoplasmic protein%3B~manually curated~PFAM: Pyruvate kinase%2C alpha/beta domain gene gene2801 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2738 Sgly_2739 Sgly_2739 Sgly_2739 2765382 2765954 - Phosphinothricin acetyltransferase COGs: COG1247 Sortase and related acyltransferase~InterPro IPR000182~KEGG: hje:HacjB3_14900 phosphinothricin N-acetyltransferase~PFAM: GCN5-related N-acetyltransferase~PRIAM: Phosphinothricin acetyltransferase~SPTR: Phosphinothricin N-acetyltransferase%3B~PFAM: Acetyltransferase (GNAT) family gene gene2802 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2739 Sgly_2740 Sgly_2740 Sgly_2740 2766048 2767319 - major facilitator superfamily MFS_1 COGs: COG2271 Sugar phosphate permease~InterPro IPR011701~KEGG: bid:Bind_1234 major facilitator transporter~PFAM: Major facilitator superfamily MFS-1~SPTR: Major facilitator superfamily MFS_1%3B~PFAM: Major Facilitator Superfamily gene gene2803 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2740 Sgly_2741 Sgly_2741 Sgly_2741 2767419 2767865 - GCN5-related N-acetyltransferase InterPro IPR000182~KEGG: amt:Amet_1419 GCN5-related N-acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: GCN5-related N-acetyltransferase%3B~PFAM: Acetyltransferase (GNAT) family gene gene2804 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2741 Sgly_2742 Sgly_2742 Sgly_2742 2768003 2768965 - cysteine synthase COGs: COG0031 Cysteine synthase~InterPro IPR001926: IPR005856: IPR005859~KEGG: cth:Cthe_1840 cysteine synthase~PFAM: Pyridoxal phosphate-dependent enzyme%2C beta subunit~PRIAM: Cysteine synthase~SPTR: Cysteine synthase A%3B~TIGRFAM: Cysteine synthase A%3B Cysteine synthase K/M~PFAM: Pyridoxal-phosphate dependent enzyme~TIGRFAM: cysteine synthase A%3B cysteine synthases gene gene2805 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2742 Sgly_2743 Sgly_2743 Sgly_2743 2769018 2770547 - oxidoreductase/nitrogenase component 1 COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains~InterPro IPR000510~KEGG: dsy:DSY4009 putative nitrogenase iron-molybdenum protein alpha chain~PFAM: Nitrogenase/oxidoreductase%2C component 1~SPTR: Putative nitrogenase iron-molybdenum protein alpha chain%3B~PFAM: Nitrogenase component 1 type Oxidoreductase gene gene2806 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2743 Sgly_2744 Sgly_2744 Sgly_2744 2770566 2771909 - oxidoreductase/nitrogenase component 1 COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains~InterPro IPR000510~KEGG: geo:Geob_2540 nitrogenase~PFAM: Nitrogenase/oxidoreductase%2C component 1~SPTR: Nitrogenase%3B~PFAM: Nitrogenase component 1 type Oxidoreductase gene gene2807 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2744 Sgly_2745 Sgly_2745 Sgly_2745 2772229 2772795 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog~InterPro IPR007627: IPR013249: IPR014284~KEGG: dhd:Dhaf_3330 RNA polymerase%2C sigma-24 subunit%2C ECF subfamily~PFAM: RNA polymerase sigma factor 70%2C region 4 type 2%3B RNA polymerase sigma-70 region 2~SPTR: RNA polymerase%2C sigma-24 subunit%2C ECF subfamily%3B~TIGRFAM: RNA polymerase sigma-70~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family gene gene2808 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2745 Sgly_2746 Sgly_2746 Sgly_2746 2772792 2773562 + hypothetical protein KEGG: dhd:Dhaf_3329 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2809 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2746 Sgly_2747 Sgly_2747 Sgly_2747 2773654 2774088 + hypothetical protein KEGG: dhd:Dhaf_3328 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2810 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2747 Sgly_2748 Sgly_2748 Sgly_2748 2774329 2775090 + hypothetical protein KEGG: cpe:PCP29 hypothetical protein~SPTR: Putative uncharacterized protein PCP29 gene gene2811 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2748 Sgly_2749 Sgly_2749 Sgly_2749 2775084 2776352 + hypothetical protein KEGG: cob:COB47_1203 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2812 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2749 Sgly_2750 Sgly_2750 Sgly_2750 2776466 2776915 + pseudogene gene2813 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2750 Sgly_2751 Sgly_2751 Sgly_2751 2776969 2777622 + hypothetical protein KEGG: dhd:Dhaf_0986 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Peptidase C39 family gene gene2814 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2751 Sgly_2752 Sgly_2752 Sgly_2752 2777738 2778778 - hypothetical protein KEGG: dsy:DSY2649 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2815 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2752 Sgly_2753 Sgly_2753 Sgly_2753 2778916 2779644 - hypothetical protein KEGG: dsy:DSY2649 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2816 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2753 Sgly_2754 Sgly_2754 Sgly_2754 2779598 2779957 - pseudogene gene2817 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2754 Sgly_2755 Sgly_2755 Sgly_2755 2780087 2780836 - hypothetical protein KEGG: ttm:Tthe_2291 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2818 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2755 Sgly_2756 Sgly_2756 Sgly_2756 2780829 2781389 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog~InterPro IPR007627: IPR013249: IPR014284~KEGG: ttm:Tthe_2290 RNA polymerase%2C sigma-24 subunit%2C ECF subfamily~PFAM: RNA polymerase sigma-70 region 2%3B RNA polymerase sigma factor 70%2C region 4 type 2~SPTR: RNA polymerase%2C sigma-24 subunit%2C ECF subfamily%3B~TIGRFAM: RNA polymerase sigma-70~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family gene gene2819 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2756 Sgly_2757 Sgly_2757 Sgly_2757 2781796 2782602 - hypothetical protein COGs: COG3315 O-Methyltransferase involved in polyketide biosynthesis~KEGG: ckr:CKR_0062 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Leucine carboxyl methyltransferase gene gene2820 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2757 Sgly_2758 Sgly_2758 Sgly_2758 2782634 2784436 - Xenobiotic-transporting ATPase COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterPro IPR003593: IPR003439~KEGG: dhd:Dhaf_4630 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ABC transporter transmembrane region%3B ABC transporter gene gene2821 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2758 Sgly_2759 Sgly_2759 Sgly_2759 2784454 2786196 - Xenobiotic-transporting ATPase COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterPro IPR003593: IPR001140: IPR003439~KEGG: dhd:Dhaf_4629 ABC transporter related~PFAM: ABC transporter-like%3B ABC transporter%2C transmembrane domain~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related%3B~PFAM: ABC transporter transmembrane region%3B ABC transporter gene gene2822 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2759 Sgly_2760 Sgly_2760 Sgly_2760 2786350 2786958 - transcriptional regulator%2C TetR family COGs: COG1309 Transcriptional regulator~InterPro IPR001647~KEGG: ssm:Spirs_3496 transcriptional regulator%2C TetR family~PFAM: Transcription regulator%2C TetR-like%2C DNA-binding%2C bacterial/archaeal~SPTR: Putative uncharacterized protein%3B~PFAM: Bacterial regulatory proteins%2C tetR family gene gene2823 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2760 Sgly_2761 Sgly_2761 Sgly_2761 2787299 2788318 - hypothetical protein COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components~KEGG: cbe:Cbei_0611 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein~SPTR: ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein%3B~PFAM: NMT1/THI5 like gene gene2824 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2761 Sgly_2762 Sgly_2762 Sgly_2762 2788352 2789188 - binding-protein-dependent transport systems inner membrane component COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component~InterPro IPR000515~KEGG: ckr:CKR_0945 hypothetical protein~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Putative uncharacterized protein%3B~manually curated~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2825 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2762 Sgly_2763 Sgly_2763 Sgly_2763 2789190 2790152 - binding-protein-dependent transport systems inner membrane component COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component~InterPro IPR000515~KEGG: ckr:CKR_0944 hypothetical protein~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Putative uncharacterized protein%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2826 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2763 Sgly_2764 Sgly_2764 Sgly_2764 2790256 2791344 - ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components~KEGG: geo:Geob_2470 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein~SPTR: ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein%3B~PFAM: NMT1/THI5 like gene gene2827 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2764 Sgly_2765 Sgly_2765 Sgly_2765 2791505 2792293 - binding-protein-dependent transport systems inner membrane component COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component~InterPro IPR000515~KEGG: geo:Geob_2490 binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Binding-protein-dependent transport systems inner membrane component%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2828 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2765 Sgly_2766 Sgly_2766 Sgly_2766 2792344 2793126 - binding-protein-dependent transport systems inner membrane component COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component~InterPro IPR000515~KEGG: geo:Geob_2489 binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Binding-protein-dependent transport systems inner membrane component%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2829 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2766 Sgly_2767 Sgly_2767 Sgly_2767 2793270 2794169 - Taurine-transporting ATPase COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: geo:Geob_2492 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Taurine-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related%3B~PFAM: ABC transporter gene gene2830 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2767 Sgly_2768 Sgly_2768 Sgly_2768 2794405 2795343 - nitroreductase COGs: COG0778 Nitroreductase~InterPro IPR000415~KEGG: gur:Gura_3871 hypothetical protein~PFAM: Nitroreductase-like~SPTR: Putative uncharacterized protein%3B~PFAM: Nitroreductase family gene gene2831 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2768 Sgly_2769 Sgly_2769 Sgly_2769 2795871 2796272 + Dinitrogenase iron-molybdenum cofactor biosynthesis protein InterPro IPR003731~KEGG: geo:Geob_2497 dinitrogenase iron-molybdenum cofactor biosynthesis protein~PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis~SPTR: Dinitrogenase iron-molybdenum cofactor biosynthesis protein%3B~PFAM: Dinitrogenase iron-molybdenum cofactor gene gene2832 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2769 Sgly_2770 Sgly_2770 Sgly_2770 2796269 2796937 - HAD-superfamily hydrolase%2C subfamily IA%2C variant 1 COGs: COG0546 phosphatase~InterPro IPR005834: IPR006439~KEGG: amu:Amuc_0718 HAD-superfamily hydrolase%2C subfamily IA%2C variant 1~PFAM: Haloacid dehalogenase-like hydrolase~SPTR: Haloacid dehalogenase domain protein hydrolase%3B~TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 1~PFAM: haloacid dehalogenase-like hydrolase~TIGRFAM: haloacid dehalogenase superfamily%2C subfamily IA%2C variant 1 with third motif having Dx(3-4)D or Dx(3-4)E gene gene2833 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2770 Sgly_2771 Sgly_2771 Sgly_2771 2797003 2797458 - hypothetical protein KEGG: ssl:SS1G_02708 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2834 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2771 Sgly_2772 Sgly_2772 Sgly_2772 2797545 2799038 - oxidoreductase/nitrogenase component 1 COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains~InterPro IPR000510~KEGG: geo:Geob_2539 nitrogenase~PFAM: Nitrogenase/oxidoreductase%2C component 1~SPTR: Nitrogenase%3B~PFAM: Nitrogenase component 1 type Oxidoreductase gene gene2835 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2772 Sgly_2773 Sgly_2773 Sgly_2773 2799043 2800377 - oxidoreductase/nitrogenase component 1 COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains~InterPro IPR000510~KEGG: geo:Geob_2540 nitrogenase~PFAM: Nitrogenase/oxidoreductase%2C component 1~SPTR: Nitrogenase%3B~PFAM: Nitrogenase component 1 type Oxidoreductase gene gene2836 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2773 Sgly_2774 Sgly_2774 Sgly_2774 2800580 2801218 - two component transcriptional regulator%2C LuxR family COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain~InterPro IPR001789: IPR000792~KEGG: gym:GYMC10_3653 two component transcriptional regulator%2C LuxR family~PFAM: Signal transduction response regulator%2C receiver domain%3B Transcription regulator LuxR%2C C-terminal~SMART: Signal transduction response regulator%2C receiver domain%3B Transcription regulator LuxR%2C C-terminal~SPTR: Two component transcriptional regulator%2C LuxR family%3B~PFAM: Response regulator receiver domain%3B Bacterial regulatory proteins%2C luxR family gene gene2837 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2774 Sgly_2775 Sgly_2775 Sgly_2775 2801437 2802918 - oxidoreductase/nitrogenase component 1 COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains~InterPro IPR000510~KEGG: geo:Geob_2500 nitrogenase~PFAM: Nitrogenase/oxidoreductase%2C component 1~SPTR: Nitrogenase%3B~PFAM: Nitrogenase component 1 type Oxidoreductase gene gene2838 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2775 Sgly_2776 Sgly_2776 Sgly_2776 2802945 2804261 - oxidoreductase/nitrogenase component 1 COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains~InterPro IPR000510~KEGG: ckr:CKR_0742 hypothetical protein~PFAM: Nitrogenase/oxidoreductase%2C component 1~SPTR: Putative uncharacterized protein%3B~PFAM: Nitrogenase component 1 type Oxidoreductase gene gene2839 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2776 Sgly_2777 Sgly_2777 Sgly_2777 2804331 2805665 - oxidoreductase/nitrogenase component 1 COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains~InterPro IPR000510~KEGG: geo:Geob_2491 nitrogenase~PFAM: Nitrogenase/oxidoreductase%2C component 1~SPTR: Nitrogenase%3B~PFAM: Nitrogenase component 1 type Oxidoreductase gene gene2840 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2777 Sgly_2778 Sgly_2778 Sgly_2778 2805672 2807171 - oxidoreductase/nitrogenase component 1 COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains~InterPro IPR000510~KEGG: geo:Geob_2460 nitrogenase~PFAM: Nitrogenase/oxidoreductase%2C component 1~SPTR: Nitrogenase%3B~PFAM: Nitrogenase component 1 type Oxidoreductase gene gene2841 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2778 Sgly_2779 Sgly_2779 Sgly_2779 2807373 2809331 - Ig domain protein COGs: COG2836 conserved hypothetical protein~InterPro IPR011080~KEGG: ckr:CKR_0963 hypothetical protein~PFAM: Bacterial Ig-like~SPTR: Putative uncharacterized protein%3B~PFAM: Bacterial Ig-like domain (group 3) gene gene2842 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2779 Sgly_2780 Sgly_2780 Sgly_2780 2809446 2811176 - cell wall binding repeat 2-containing protein COGs: COG2247 Putative cell wall-binding domain~InterPro IPR007253~KEGG: clj:CLJU_c24750 putative cell wall-binding protein~PFAM: Putative cell wall binding repeat 2~SPTR: Predicted cell wall binding protein%3B~PFAM: Putative cell wall binding repeat 2 gene gene2843 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2780 Sgly_2781 Sgly_2781 Sgly_2781 2811311 2812147 - integral membrane sensor signal transduction histidine kinase COGs: COG4585 Signal transduction histidine kinase~InterPro IPR011712: IPR003594~KEGG: gym:GYMC10_3654 integral membrane sensor signal transduction histidine kinase~PFAM: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 3%2C dimerisation and phosphoacceptor domain~SPTR: Integral membrane sensor signal transduction histidine kinase%3B~PFAM: Histidine kinase%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase gene gene2844 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2781 Sgly_2782 Sgly_2782 Sgly_2782 2812557 2814875 + heavy metal translocating P-type ATPase COGs: COG2217 Cation transport ATPase~InterPro IPR006121: IPR008250: IPR005834: IPR006403: IPR 006416: IPR001757~KEGG: ckr:CKR_1972 hypothetical protein~PFAM: ATPase%2C P-type%2C ATPase-associated domain%3B Heavy metal transport/detoxification protein%3B Haloacid dehalogenase-like hydrolase~PRIAM: Copper-exporting ATPase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: ATPase%2C P-type%2C heavy metal translocating%3B ATPase%2C P type%2C cation/copper-transporter%3B ATPase%2C P-type%2C K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter~PFAM: E1-E2 ATPase%3B Heavy-metal-associated domain%3B haloacid dehalogenase-like hydrolase~TIGRFAM: copper-(or silver)-translocating P-type ATPase%3B heavy metal translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC gene gene2845 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2782 Sgly_2783 Sgly_2783 Sgly_2783 2814959 2815315 + hypothetical protein KEGG: vsa:VSAL_I0571 integral membrane protein~SPTR: Integral membrane protein gene gene2846 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2783 Sgly_2784 Sgly_2784 Sgly_2784 2815591 2816814 + cysteine synthase%3B cystathionine gamma-synthase COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase~InterPro IPR000277~KEGG: dsy:DSY3983 hypothetical protein~PFAM: Cys/Met metabolism%2C pyridoxal phosphate-dependent enzyme~SPTR: Putative uncharacterized protein%3B~PFAM: Cys/Met metabolism PLP-dependent enzyme gene gene2847 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2784 Sgly_2785 Sgly_2785 Sgly_2785 2816865 2818013 + cystathionine beta-lyase COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase~InterPro IPR000277~KEGG: amt:Amet_3706 cystathionine gamma-synthase~PFAM: Cys/Met metabolism%2C pyridoxal phosphate-dependent enzyme~SPTR: Cystathionine gamma-synthase%3B~PFAM: Cys/Met metabolism PLP-dependent enzyme gene gene2848 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2785 Sgly_2786 Sgly_2786 Sgly_2786 2818111 2819451 - oxidoreductase/nitrogenase component 1 COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains~InterPro IPR000510~KEGG: geo:Geob_2540 nitrogenase~PFAM: Nitrogenase/oxidoreductase%2C component 1~SPTR: Nitrogenase%3B~PFAM: Nitrogenase component 1 type Oxidoreductase gene gene2849 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2786 Sgly_2787 Sgly_2787 Sgly_2787 2819452 2820966 - oxidoreductase/nitrogenase component 1 COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains~InterPro IPR000510~KEGG: geo:Geob_2539 nitrogenase~PFAM: Nitrogenase/oxidoreductase%2C component 1~SPTR: Nitrogenase%3B~PFAM: Nitrogenase component 1 type Oxidoreductase gene gene2850 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2787 Sgly_2788 Sgly_2788 Sgly_2788 2821140 2821793 - Methionine synthase B12-binding module cap domain protein COGs: COG5012 cobalamin binding protein~InterPro IPR003759: IPR006158~KEGG: cth:Cthe_2784 cobalamin B12-binding protein~PFAM: Methionine synthase%2C cobalamin (vitamin B12)-binding module%2C cap%3B Cobalamin (vitamin B12)-binding~SPTR: Cobalamin B12-binding protein%3B~PFAM: B12 binding domain~TIGRFAM: methyltransferase cognate corrinoid proteins%2C Methanosarcina family gene gene2851 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2788 Sgly_2789 Sgly_2789 Sgly_2789 2821820 2822875 - Uroporphyrinogen decarboxylase (URO-D) COGs: COG0407 Uroporphyrinogen-III decarboxylase~InterPro IPR000257~KEGG: fpl:Ferp_1758 uroporphyrinogen decarboxylase (URO-D)~PFAM: Uroporphyrinogen decarboxylase (URO-D)~SPTR: Uroporphyrinogen decarboxylase (URO-D)%3B~PFAM: Uroporphyrinogen decarboxylase (URO-D)~TIGRFAM: methyltransferase%2C MtaA/CmuA family gene gene2852 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2789 Sgly_2790 Sgly_2790 Sgly_2790 2823044 2824000 - cysteine synthase COGs: COG0031 Cysteine synthase~InterPro IPR001926: IPR005859: IPR005856~KEGG: cth:Cthe_1840 cysteine synthase~PFAM: Pyridoxal phosphate-dependent enzyme%2C beta subunit~PRIAM: Cysteine synthase~SPTR: Cysteine synthase%3B~TIGRFAM: Cysteine synthase A%3B Cysteine synthase K/M~PFAM: Pyridoxal-phosphate dependent enzyme~TIGRFAM: cysteine synthase A%3B cysteine synthases gene gene2853 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2790 Sgly_2791 Sgly_2791 Sgly_2791 2824071 2824337 - hypothetical protein COGs: COG4378 conserved hypothetical protein~KEGG: aoe:Clos_1708 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterized protein conserved in bacteria (DUF2325) gene gene2854 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2791 Sgly_2792 Sgly_2792 Sgly_2792 2824492 2825790 - oxidoreductase/nitrogenase component 1 COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains~InterPro IPR000510~KEGG: geo:Geob_2501 nitrogenase~PFAM: Nitrogenase/oxidoreductase%2C component 1~SPTR: Nitrogenase%3B~PFAM: Nitrogenase component 1 type Oxidoreductase gene gene2855 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2792 Sgly_2793 Sgly_2793 Sgly_2793 2825798 2827255 - oxidoreductase/nitrogenase component 1 COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains~InterPro IPR000510~KEGG: fsu:Fisuc_1078 oxidoreductase/nitrogenase component 1~PFAM: Nitrogenase/oxidoreductase%2C component 1~SPTR: Oxidoreductase/nitrogenase component 1%3B~PFAM: Nitrogenase component 1 type Oxidoreductase gene gene2856 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2793 Sgly_2794 Sgly_2794 Sgly_2794 2827298 2828455 - Glycerol dehydrogenase COGs: COG0371 Glycerol dehydrogenase~InterPro IPR002658~KEGG: tjr:TherJR_0633 iron-containing alcohol dehydrogenase~PFAM: 3-dehydroquinate synthase AroB~PRIAM: Glycerol dehydrogenase~SPTR: Iron-containing alcohol dehydrogenase%3B~PFAM: Iron-containing alcohol dehydrogenase gene gene2857 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2794 Sgly_2795 Sgly_2795 Sgly_2795 2828777 2829871 + Histidinol-phosphate aminotransferase COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase~HAMAP: Histidinol-phosphate aminotransferase~InterPro IPR005861: IPR004839~KEGG: csc:Csac_2697 histidinol-phosphate aminotransferase~PFAM: Aminotransferase%2C class I/II~PRIAM: Histidinol-phosphate transaminase~SPTR: Histidinol-phosphate aminotransferase%3B~TIGRFAM: Histidinol-phosphate aminotransferase~PFAM: Aminotransferase class I and II~TIGRFAM: histidinol-phosphate aminotransferase gene gene2858 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2795 Sgly_2796 Sgly_2796 Sgly_2796 2830157 2832577 + cell wall binding repeat 2-containing protein COGs: COG2247 Putative cell wall-binding domain~InterPro IPR011432: IPR007253~KEGG: mac:MA3471 hypothetical protein~PFAM: Putative cell wall binding repeat 2%3B Protein of unknown function DUF1533~SPTR: Putative uncharacterized protein%3B~PFAM: The GLUG motif%3B Putative cell wall binding repeat 2%3B Protein of unknown function (DUF1533) gene gene2859 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2796 Sgly_2797 Sgly_2797 Sgly_2797 2832895 2833521 + VanZ family protein InterPro IPR006976~KEGG: clj:CLJU_c10800 VanZ like protein~PFAM: VanZ-like~SPTR: VanZ like protein%3B~PFAM: VanZ like family gene gene2860 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2797 Sgly_2798 Sgly_2798 Sgly_2798 2833559 2835304 - Xenobiotic-transporting ATPase COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterPro IPR003593: IPR003439~KEGG: shi:Shel_25700 ABC-type multidrug transport system%2C ATPase and permease component~PFAM: ABC transporter-like~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC-type multidrug transport system%2C ATPase and permease components%3B~PFAM: ABC transporter transmembrane region%3B ABC transporter gene gene2861 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2798 Sgly_2799 Sgly_2799 Sgly_2799 2835306 2837051 - Xenobiotic-transporting ATPase COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterPro IPR003593: IPR001140: IPR003439~KEGG: shi:Shel_25690 ABC-type multidrug transport system%2C ATPase and permease component~PFAM: ABC transporter-like%3B ABC transporter%2C transmembrane domain~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ABC transporter transmembrane region%3B ABC transporter gene gene2862 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2799 Sgly_2800 Sgly_2800 Sgly_2800 2837267 2838289 - transcriptional regulator%2C AraC family COGs: COG2207 AraC-type DNA-binding domain-containing protein~InterPro IPR018060: IPR000005~KEGG: ckr:CKR_3297 hypothetical protein~PFAM: Helix-turn-helix%2C AraC type~SMART: Helix-turn-helix%2C AraC domain~SPTR: Putative uncharacterized protein%3B~PFAM: Bacterial regulatory helix-turn-helix proteins%2C AraC family gene gene2863 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2800 Sgly_2801 Sgly_2801 Sgly_2801 2838512 2840064 - pseudogene gene2864 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2801 Sgly_2802 Sgly_2802 Sgly_2802 2840353 2841186 + methyl-accepting chemotaxis sensory transducer COGs: COG0840 Methyl-accepting chemotaxis protein~InterPro IPR004089~KEGG: clj:CLJU_c17500 putative chemotaxis sensory transducer~PFAM: Chemotaxis methyl-accepting receptor%2C signalling~SMART: Chemotaxis methyl-accepting receptor%2C signalling~SPTR: Methyl-accepting chemotaxis protein signaling domain protein%3B~PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain gene gene2865 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2802 Sgly_2803 Sgly_2803 Sgly_2803 2841305 2841646 - Dinitrogenase iron-molybdenum cofactor biosynthesis protein InterPro IPR003731~KEGG: cbe:Cbei_0627 dinitrogenase iron-molybdenum cofactor biosynthesis protein~PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis~SPTR: Dinitrogenase iron-molybdenum cofactor biosynthesis protein%3B~PFAM: Dinitrogenase iron-molybdenum cofactor gene gene2866 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2803 Sgly_2804 Sgly_2804 Sgly_2804 2841767 2842645 - Nitrogenase iron protein COGs: COG1348 Nitrogenase subunit NifH (ATPase)~HAMAP: Nitrogenase iron protein NifH~InterPro IPR005977: IPR000392~KEGG: dhd:Dhaf_1353 nitrogenase iron protein~PFAM: Nitrogenase iron protein%2C subunit NifH/Protochlorophyllide reductase%2C subunit ChlL~PRIAM: Nitrogenase~SPTR: Nitrogenase iron protein 2%3B~TIGRFAM: Nitrogenase iron protein NifH~PFAM: 4Fe-4S iron sulfur cluster binding proteins%2C NifH/frxC family~TIGRFAM: nitrogenase iron protein gene gene2867 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2804 Sgly_2805 Sgly_2805 Sgly_2805 2842878 2843048 - Protein of unknown function DUF2292 InterPro IPR018743~KEGG: ckr:CKR_0743 hypothetical protein~PFAM: Protein of unknown function DUF2292~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterized small protein (DUF2292) gene gene2868 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2805 Sgly_2806 Sgly_2806 Sgly_2806 2843140 2843304 - Protein of unknown function DUF2292 InterPro IPR018743~KEGG: cbe:Cbei_0619 hypothetical protein~PFAM: Protein of unknown function DUF2292~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterized small protein (DUF2292) gene gene2869 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2806 Sgly_2807 Sgly_2807 Sgly_2807 2843439 2844269 - NLPA lipoprotein COGs: COG1464 ABC-type metal ion transport system periplasmic component/surface antigen~InterPro IPR004872~KEGG: ckr:CKR_0740 hypothetical protein~PFAM: NLPA lipoprotein~SPTR: Putative uncharacterized protein%3B~PFAM: NLPA lipoprotein~TIGRFAM: lipoprotein%2C YaeC family gene gene2870 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2807 Sgly_2808 Sgly_2808 Sgly_2808 2844328 2845002 - binding-protein-dependent transport systems inner membrane component COGs: COG2011 ABC-type metal ion transport system permease component~InterPro IPR000515~KEGG: pjd:Pjdr2_1624 binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Binding-protein-dependent transport systems inner membrane component%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2871 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2808 Sgly_2809 Sgly_2809 Sgly_2809 2844999 2845778 - Phosphonate-transporting ATPase COGs: COG1135 ABC-type metal ion transport system ATPase component~InterPro IPR003593: IPR003439~KEGG: cbe:Cbei_0624 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Phosphonate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related%3B~PFAM: ABC transporter gene gene2872 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2809 Sgly_2810 Sgly_2810 Sgly_2810 2845791 2846681 - Radical SAM domain protein COGs: COG0535 Fe-S oxidoreductase~InterPro IPR006638: IPR007197~KEGG: cbe:Cbei_0628 radical SAM domain-containing protein~PFAM: Radical SAM~SMART: Elongator protein 3/MiaB/NifB~SPTR: Radical SAM domain protein%3B~PFAM: Radical SAM superfamily~TIGRFAM: nitrogenase cofactor biosynthesis protein NifB gene gene2873 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2810 Sgly_2811 Sgly_2811 Sgly_2811 2846880 2848013 - cystathionine beta-lyase COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase~InterPro IPR000277~KEGG: amt:Amet_3706 cystathionine gamma-synthase~PFAM: Cys/Met metabolism%2C pyridoxal phosphate-dependent enzyme~SPTR: Cystathionine gamma-synthase%3B~PFAM: Cys/Met metabolism PLP-dependent enzyme gene gene2874 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2811 Sgly_2812 Sgly_2812 Sgly_2812 2848170 2849897 - methyl-accepting chemotaxis sensory transducer COGs: COG0840 Methyl-accepting chemotaxis protein~InterPro IPR003660: IPR004089~KEGG: clj:CLJU_c15520 putative methyl-accepting chemotaxis protein~PFAM: Chemotaxis methyl-accepting receptor%2C signalling%3B HAMP linker domain~SMART: Chemotaxis methyl-accepting receptor%2C signalling%3B HAMP linker domain~SPTR: Predicted methyl-accepting chemotaxis protein%3B~PFAM: HAMP domain%3B Methyl-accepting chemotaxis protein (MCP) signaling domain gene gene2875 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2812 Sgly_2813 Sgly_2813 Sgly_2813 2850037 2853522 - methionine synthase (B12-dependent) COGs: COG1410 Methionine synthase I cobalamin-binding domain~InterPro IPR003726: IPR000489: IPR003759: IPR006158: IPR 004223: IPR011822~KEGG: bbe:BBR47_22030 5-methyltetrahydrofolate--homocysteine methyltransferase~PFAM: Homocysteine S-methyltransferase%3B Dihydropteroate synthase%2C DHPS%3B Methionine synthase%2C cobalamin (vitamin B12)-binding module%2C cap%3B Cobalamin (vitamin B12)-binding%3B Vitamin B12-dependent methionine synthase%2C activation domain~PRIAM: Methionine synthase~SPTR: 5-methyltetrahydrofolate--homocysteine methyltransferase%3B~TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase~PFAM: Pterin binding enzyme%3B Vitamin B12 dependent methionine synthase%2C activation domain%3B B12 binding domain%3B Homocysteine S-methyltransferase~TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase%3B methylmalonyl-CoA mutase C-terminal domain gene gene2876 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2813 Sgly_2814 Sgly_2814 Sgly_2814 2853714 2855627 - carbon-monoxide dehydrogenase%2C catalytic subunit COGs: COG1151 6Fe-6S prismane cluster-containing protein~InterPro IPR004137: IPR010047~KEGG: clj:CLJU_c17910 carbon monoxide dehydrogenase catalytic subunit~PFAM: Prismane~PRIAM: Carbon-monoxide dehydrogenase (acceptor)~SPTR: Carbon monoxide dehydrogenase%2C catalytic subunit%3B~TIGRFAM: Carbon-monoxide dehydrogenase%2C catalytic subunit~PFAM: Prismane/CO dehydrogenase family~TIGRFAM: carbon-monoxide dehydrogenase%2C catalytic subunit gene gene2877 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2814 Sgly_2815 Sgly_2815 Sgly_2815 2855758 2856060 - protein of unknown function DUF77 COGs: COG0011 conserved hypothetical protein~InterPro IPR002767~KEGG: fma:FMG_1489 hypothetical protein~PFAM: Protein of unknown function DUF77~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Protein of unknown function DUF77~PFAM: Domain of unknown function DUF77~TIGRFAM: uncharacterized protein%2C MTH1187 family gene gene2878 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2815 Sgly_2816 Sgly_2816 Sgly_2816 2856137 2858011 - Chaperone protein htpG COGs: COG0326 Molecular chaperone HSP90 family~HAMAP: Chaperone protein htpG~InterPro IPR003594: IPR020576: IPR001404~KEGG: dhd:Dhaf_3230 heat shock protein 90~PFAM: Heat shock protein Hsp90%2C C-terminal%3B ATPase-like%2C ATP-binding domain~SPTR: Chaperone protein htpG%3B~PFAM: Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B Hsp90 protein gene gene2879 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2816 Sgly_2817 Sgly_2817 Sgly_2817 2858036 2859091 - metal dependent phosphohydrolase COGs: COG2206 HD-GYP domain~InterPro IPR006674: IPR003607: IPR006675~KEGG: cce:Ccel_0497 metal dependent phosphohydrolase~PFAM: Metal-dependent phosphohydrolase%2C HD subdomain~SMART: Metal-dependent phosphohydrolase%2C HD domain~SPTR: Metal dependent phosphohydrolase%3B~TIGRFAM: HDIG~PFAM: HD domain~TIGRFAM: uncharacterized domain HDIG gene gene2880 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2817 Sgly_2818 Sgly_2818 Sgly_2818 2859271 2859909 - SNARE associated Golgi protein-like protein COGs: COG0586 membrane-associated protein~InterPro IPR015414~KEGG: cbe:Cbei_3249 SNARE associated golgi protein~PFAM: SNARE associated Golgi protein~SPTR: SNARE associated Golgi protein%3B~PFAM: SNARE associated Golgi protein gene gene2881 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2818 Sgly_2819 Sgly_2819 Sgly_2819 2860060 2860311 - hypothetical protein KEGG: hmo:HM1_1285 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2882 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2819 Sgly_2820 Sgly_2820 Sgly_2820 2860550 2861953 + Peptidase M23 COGs: COG0739 Membrane protein related to metalloendopeptidase~InterPro IPR018392: IPR011098: IPR016047: IPR002482~KEGG: dsy:DSY1605 hypothetical protein~PFAM: Peptidase M23%3B G5%3B Peptidoglycan-binding lysin domain~SMART: Peptidoglycan-binding Lysin subgroup~SPTR: Putative uncharacterized protein%3B~PFAM: Peptidase family M23%3B G5 domain%3B LysM domain gene gene2883 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2820 Sgly_2821 Sgly_2821 Sgly_2821 2862286 2862438 + hypothetical protein gene gene2884 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2821 Sgly_2822 Sgly_2822 Sgly_2822 2862438 2862656 + hypothetical protein KEGG: phu:Phum_PHUM397030 hypothetical protein~SPTR: Ribonucleoside-diphosphate reductase gene gene2885 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2822 Sgly_2823 Sgly_2823 Sgly_2823 2862628 2863398 + binding-protein-dependent transport systems inner membrane component COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component~InterPro IPR000515~KEGG: geo:Geob_2489 binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Binding-protein-dependent transport systems inner membrane component%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2886 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2823 Sgly_2824 Sgly_2824 Sgly_2824 2863469 2864245 + binding-protein-dependent transport systems inner membrane component COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component~InterPro IPR000515~KEGG: cbe:Cbei_0615 binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Binding-protein-dependent transport systems inner membrane component%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2887 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2824 Sgly_2825 Sgly_2825 Sgly_2825 2864305 2865405 + ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components~KEGG: cbe:Cbei_0616 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein~SPTR: ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein%3B~PFAM: NMT1/THI5 like gene gene2888 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2825 Sgly_2826 Sgly_2826 Sgly_2826 2865435 2866541 + ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components~KEGG: cbe:Cbei_0616 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein~SPTR: ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein%3B~PFAM: NMT1/THI5 like gene gene2889 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2826 Sgly_2827 Sgly_2827 Sgly_2827 2866652 2867737 + binding-protein-dependent transport systems inner membrane component COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component~InterPro IPR000515~KEGG: ckr:CKR_0944 hypothetical protein~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Putative uncharacterized protein%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2890 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2827 Sgly_2828 Sgly_2828 Sgly_2828 2867764 2868516 + binding-protein-dependent transport systems inner membrane component COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component~InterPro IPR000515~KEGG: geo:Geob_2494 binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Binding-protein-dependent transport systems inner membrane component%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2891 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2828 Sgly_2829 Sgly_2829 Sgly_2829 2868741 2870570 + GTP-binding protein TypA COGs: COG1217 membrane GTPase involved in stress response~InterPro IPR000795: IPR004161: IPR000640: IPR005225: IPR 006298~KEGG: dhd:Dhaf_2726 GTP-binding protein TypA~PFAM: Protein synthesis factor%2C GTP-binding%3B Translation elongation factor EFTu/EF1A%2C domain 2%3B Translation elongation factor EFG/EF2%2C C-terminal~SPTR: GTP-binding protein TypA%3B~TIGRFAM: GTP-binding protein TypA%3B Small GTP-binding protein~PFAM: Elongation factor Tu domain 2%3B Elongation factor G C-terminus%3B Elongation factor Tu GTP binding domain~TIGRFAM: GTP-binding protein TypA/BipA%3B small GTP-binding protein domain gene gene2892 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2829 Sgly_2830 Sgly_2830 Sgly_2830 2870678 2871148 - NADPH-dependent 7-cyano-7-deazaguanine reductase COGs: COG0780 Enzyme related to GTP cyclohydrolase I~HAMAP: Nitrile oxidoreductase%2C NADPH-dependent%2C QueF~InterPro IPR020602: IPR016856~KEGG: vpr:Vpar_0139 7-cyano-7-deazaguanine reductase~PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase~PRIAM: PreQ(1) synthase~SPTR: NADPH-dependent 7-cyano-7-deazaguanine reductase%3B~TIGRFAM: Nitrile oxidoreductase%2C NADPH-dependent%2C QueF~PFAM: GTP cyclohydrolase I~TIGRFAM: 7-cyano-7-deazaguanine reductase gene gene2893 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2830 Sgly_2831 Sgly_2831 Sgly_2831 2871231 2871680 - transcriptional regulator%2C BadM/Rrf2 family COGs: COG1959 transcriptional regulator protein~InterPro IPR000944~KEGG: slp:Slip_0309 transcriptional regulator%2C BadM/Rrf2 family~PFAM: Transcription regulator Rrf2~SPTR: Transcriptional regulator%2C BadM/Rrf2 family%3B~TIGRFAM: Transcription regulator Rrf2~PFAM: Transcriptional regulator~TIGRFAM: rrf2 family protein (putative transcriptional regulator) gene gene2894 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2831 Sgly_2832 Sgly_2832 Sgly_2832 2871957 2873111 - 2-isopropylmalate synthase COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase~InterPro IPR000891~KEGG: dae:Dtox_2011 pyruvate carboxyltransferase~PFAM: Pyruvate carboxyltransferase~PRIAM: 2-isopropylmalate synthase~SPTR: Pyruvate carboxyltransferase%3B~PFAM: HMGL-like gene gene2895 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2832 Sgly_2833 Sgly_2833 Sgly_2833 2873142 2873840 - Nitrogenase iron-iron accessory protein AnfO InterPro IPR014287~KEGG: dae:Dtox_1032 hypothetical protein~PFAM: Nitrogenase iron-iron%2C accessory protein AnfO~SPTR: Putative uncharacterized protein%3B~PFAM: Iron only nitrogenase protein AnfO (AnfO_nitrog)~TIGRFAM: Fe-only nitrogenase accessory protein AnfO gene gene2896 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2833 Sgly_2834 Sgly_2834 Sgly_2834 2873859 2874758 - Radical SAM domain protein COGs: COG0535 Fe-S oxidoreductase~InterPro IPR007197: IPR006638~KEGG: dae:Dtox_1030 radical SAM domain protein~PFAM: Radical SAM~SMART: Elongator protein 3/MiaB/NifB~SPTR: Radical SAM domain protein%3B~PFAM: Radical SAM superfamily~TIGRFAM: nitrogenase cofactor biosynthesis protein NifB gene gene2897 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2834 Sgly_2835 Sgly_2835 Sgly_2835 2874809 2876182 - oxidoreductase/nitrogenase component 1 COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains~InterPro IPR000510~KEGG: dae:Dtox_1029 nitrogenase~PFAM: Nitrogenase/oxidoreductase%2C component 1~SPTR: Nitrogenase%3B~PFAM: Nitrogenase component 1 type Oxidoreductase gene gene2898 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2835 Sgly_2836 Sgly_2836 Sgly_2836 2876145 2877545 - nitrogenase MoFe cofactor biosynthesis protein NifE COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains~InterPro IPR000510: IPR005973~KEGG: drm:Dred_2816 nitrogenase MoFe cofactor biosynthesis protein NifE~PFAM: Nitrogenase/oxidoreductase%2C component 1~SPTR: Nitrogenase MoFe cofactor biosynthesis protein NifE%3B~TIGRFAM: Nitrogenase MoFe cofactor biosynthesis protein NifE~PFAM: Nitrogenase component 1 type Oxidoreductase~TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifE gene gene2899 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2836 Sgly_2837 Sgly_2837 Sgly_2837 2877659 2877925 - ferredoxin III%2C nif-specific InterPro IPR014283~KEGG: hmo:HM1_0860 ferredoxin III%2C nif-specific%2C putative~SPTR: Ferredoxin iii%2C nif-specific%2C putative%3B~TIGRFAM: Ferredoxin III 4[4Fe-4S]%2C nif-specific~PFAM: 4Fe-4S binding domain~TIGRFAM: ferredoxin III%2C nif-specific gene gene2900 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2837 Sgly_2838 Sgly_2838 Sgly_2838 2877925 2878308 - nitrogen fixation protein NifX InterPro IPR003731: IPR013480~KEGG: hmo:HM1_0861 NifX~PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis~SPTR: NifX%3B~TIGRFAM: Nitrogen fixation protein NifX~PFAM: Dinitrogenase iron-molybdenum cofactor~TIGRFAM: nitrogen fixation protein NifX gene gene2901 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2838 Sgly_2839 Sgly_2839 Sgly_2839 2878351 2879808 - Mo-nitrogenase MoFe protein subunit NifK COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains~InterPro IPR000510: IPR005976~KEGG: hmo:HM1_0864 dinitrogenase molybdenum-iron protein beta subunit NifK~PFAM: Nitrogenase/oxidoreductase%2C component 1~PRIAM: Nitrogenase~SPTR: Dinitrogenase molybdenum-iron protein beta subunit nifk%3B~TIGRFAM: Nitrogenase molybdenum-iron protein beta chain~PFAM: Nitrogenase component 1 type Oxidoreductase~TIGRFAM: nitrogenase molybdenum-iron protein beta chain gene gene2902 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2839 Sgly_2840 Sgly_2840 Sgly_2840 2879805 2881265 - Mo-nitrogenase MoFe protein subunit NifD precursor COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains~InterPro IPR000510: IPR005972: IPR010143~KEGG: hmo:HM1_0865 dinitrogenase molybdenum-iron protein alpha subunit NifD~PFAM: Nitrogenase/oxidoreductase%2C component 1~SPTR: Nitrogenase protein alpha chain%3B~TIGRFAM: Nitrogenase molybdenum-iron protein alpha chain%3B Nitrogenase component 1%2C alpha chain~PFAM: Nitrogenase component 1 type Oxidoreductase~TIGRFAM: nitrogenase component I%2C alpha chain%3B nitrogenase alpha chain%3B nitrogenase molybdenum-iron protein alpha chain gene gene2903 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2840 Sgly_2841 Sgly_2841 Sgly_2841 2881338 2882192 - Mo-nitrogenase iron protein subunit NifH COGs: COG1348 Nitrogenase subunit NifH (ATPase)~HAMAP: Nitrogenase iron protein NifH~InterPro IPR000392: IPR005977~KEGG: hmo:HM1_0866 dinitrogenase iron protein NifH~PFAM: Nitrogenase iron protein%2C subunit NifH/Protochlorophyllide reductase%2C subunit ChlL~PRIAM: Nitrogenase~SPTR: Nitrogenase iron protein%3B~TIGRFAM: Nitrogenase iron protein NifH~PFAM: 4Fe-4S iron sulfur cluster binding proteins%2C NifH/frxC family~TIGRFAM: nitrogenase iron protein gene gene2904 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2841 Sgly_2842 Sgly_2842 Sgly_2842 2882242 2882628 - nitrogen regulatory protein P-II COGs: COG0347 Nitrogen regulatory protein PII~InterPro IPR002187~KEGG: hmo:HM1_0867 nitrogen regulatory protein p-II~PFAM: Nitrogen regulatory protein PII~SPTR: Nitrogen regulatory protein p-ii%3B~PFAM: Nitrogen regulatory protein P-II gene gene2905 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2842 Sgly_2843 Sgly_2843 Sgly_2843 2882643 2882960 - nitrogen regulatory protein P-II COGs: COG0347 Nitrogen regulatory protein PII~InterPro IPR002187~KEGG: hmo:HM1_0868 nitrogen regulatory protein p-II~PFAM: Nitrogen regulatory protein PII~SPTR: Nitrogen regulatory protein p-ii%3B~PFAM: Nitrogen regulatory protein P-II gene gene2906 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2843 Sgly_2844 Sgly_2844 Sgly_2844 2882908 2883102 - hypothetical protein KEGG: tva:TVAG_050150 hypothetical protein gene gene2907 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2844 Sgly_2845 Sgly_2845 Sgly_2845 2883574 2884122 - pyridoxamine 5'-phosphate oxidase-related FMN-binding protein COGs: COG3467 flavin-nucleotide-binding protein~InterPro IPR011576~KEGG: ckr:CKR_0324 hypothetical protein~PFAM: Pyridoxamine 5'-phosphate oxidase-like%2C FMN-binding domain~SPTR: Putative uncharacterized protein%3B~PFAM: Pyridoxamine 5'-phosphate oxidase gene gene2908 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2845 Sgly_2846 Sgly_2846 Sgly_2846 2884127 2884837 - glutamine amidotransferase class-I COGs: COG0518 GMP synthase - Glutamine amidotransferase domain~InterPro IPR000991~KEGG: ckr:CKR_0323 hypothetical protein~PFAM: Glutamine amidotransferase class-I%2C C-terminal~SPTR: Putative uncharacterized protein%3B~PFAM: Glutamine amidotransferase class-I gene gene2909 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2846 Sgly_2847 Sgly_2847 Sgly_2847 2884839 2885237 - hypothetical protein KEGG: dda:Dd703_2614 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2910 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2847 Sgly_2848 Sgly_2848 Sgly_2848 2885364 2886752 - Fe-only nitrogenase FeFe protein subunit AnfK COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains~InterPro IPR000510: IPR014280~KEGG: ckr:CKR_0322 hypothetical protein~PFAM: Nitrogenase/oxidoreductase%2C component 1~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Nitrogenase iron-iron%2C beta subunit~PFAM: Nitrogenase component 1 type Oxidoreductase~TIGRFAM: Fe-only nitrogenase%2C beta subunit gene gene2911 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2848 Sgly_2849 Sgly_2849 Sgly_2849 2886820 2887170 - Fe-only nitrogenase FeFe protein subunit AnfG InterPro IPR004349: IPR014278~KEGG: ckr:CKR_0321 hypothetical protein~PFAM: Vanadium/alternative nitrogenase delta subunit~PRIAM: Nitrogenase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Nitrogenase iron-iron%2C delta subunit~PFAM: Vanadium/alternative nitrogenase delta subunit~TIGRFAM: Fe-only nitrogenase%2C delta subunit gene gene2912 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2849 Sgly_2850 Sgly_2850 Sgly_2850 2887185 2888750 - Fe-only nitrogenase FeFe protein subunit AnfD precursor COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains~InterPro IPR000510: IPR011290: IPR005974: IPR010143~KEGG: ckr:CKR_0320 hypothetical protein~PFAM: Nitrogenase/oxidoreductase%2C component 1~PRIAM: Nitrogenase~SPTR: Nitrogenase protein alpha chain%3B~TIGRFAM: Nitrogenase iron-iron protein%2C alpha chain%3B Nitrogenase alpha chain%3B Nitrogenase component 1%2C alpha chain~PFAM: Nitrogenase component 1 type Oxidoreductase~TIGRFAM: nitrogenase component I%2C alpha chain%3B nitrogenase alpha chain%3B nitrogenase iron-iron protein%2C alpha chain gene gene2913 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2850 Sgly_2851 Sgly_2851 Sgly_2851 2888765 2889145 - nitrogen regulatory protein P-II COGs: COG0347 Nitrogen regulatory protein PII~InterPro IPR002187~KEGG: mac:MA1211 P-II family nitrogen regulatory protein~PFAM: Nitrogen regulatory protein PII~SPTR: P-II family nitrogen regulatory protein%3B~PFAM: Nitrogen regulatory protein P-II gene gene2914 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2851 Sgly_2852 Sgly_2852 Sgly_2852 2889158 2889475 - nitrogen regulatory protein P-II COGs: COG0347 Nitrogen regulatory protein PII~InterPro IPR002187~KEGG: mac:MA1212 P-II family nitrogen regulatory protein~PFAM: Nitrogen regulatory protein PII~SPTR: P-II family nitrogen regulatory protein%3B~PFAM: Nitrogen regulatory protein P-II gene gene2915 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2852 Sgly_2853 Sgly_2853 Sgly_2853 2889516 2890340 - Nitrogenase iron protein COGs: COG1348 Nitrogenase subunit NifH (ATPase)~HAMAP: Nitrogenase iron protein NifH~InterPro IPR000392: IPR005977~KEGG: cts:Ctha_1828 nitrogenase iron protein~PFAM: Nitrogenase iron protein%2C subunit NifH/Protochlorophyllide reductase%2C subunit ChlL~PRIAM: Nitrogenase~SPTR: Nitrogenase iron protein 3%3B~TIGRFAM: Nitrogenase iron protein NifH~PFAM: 4Fe-4S iron sulfur cluster binding proteins%2C NifH/frxC family~TIGRFAM: nitrogenase iron protein gene gene2916 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2853 Sgly_2854 Sgly_2854 Sgly_2854 2890661 2891935 + DNA binding domain protein%2C excisionase family COGs: COG1910 Periplasmic molybdate-binding protein/domain~InterPro IPR010093~KEGG: ckr:CKR_2727 hypothetical protein~SPTR: DNA binding domain protein%2C excisionase family%3B~TIGRFAM: Excisionase/Xis%2C DNA-binding~TIGRFAM: DNA binding domain%2C excisionase family gene gene2917 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2854 Sgly_2855 Sgly_2855 Sgly_2855 2892404 2893060 + 4Fe-4S ferredoxin iron-sulfur binding domain protein KEGG: cce:Ccel_0631 4Fe-4S ferredoxin iron-sulfur binding domain protein~SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein gene gene2918 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2855 Sgly_2856 Sgly_2856 Sgly_2856 2893178 2894338 + putative menaquinone biosynthesis protein COGs: COG1060 Thiamine biosynthesis protein ThiH~InterPro IPR007197: IPR006638: IPR020050~KEGG: slp:Slip_1167 radical SAM domain protein~PFAM: Radical SAM~SMART: Elongator protein 3/MiaB/NifB~SPTR: Radical SAM domain protein%3B~TIGRFAM: putative menaquinone biosynthesis protein%3B FO synthase%2C subunit 2~PFAM: Radical SAM superfamily~TIGRFAM: putative menaquinone biosynthesis protein%2C SCO4494 family%3B radical SAM domain protein%2C CofH subfamily gene gene2919 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2856 Sgly_2857 Sgly_2857 Sgly_2857 2894323 2895168 + protein of unknown function DUF178 COGs: COG1427 periplasmic solute-binding protein~InterPro IPR003773~KEGG: swo:Swol_1158 hypothetical protein~PFAM: Protein of unknown function DUF178~SPTR: Putative uncharacterized protein%3B~PFAM: Putative periplasminc binding protein (DUF178) gene gene2920 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2857 Sgly_2858 Sgly_2858 Sgly_2858 2895234 2896295 + menaquinone biosynthesis protein COGs: COG1060 Thiamine biosynthesis protein ThiH~InterPro IPR007197: IPR020050~KEGG: swo:Swol_1159 hypothetical protein~PFAM: Radical SAM~SPTR: Putative uncharacterized protein%3B~TIGRFAM: menaquinone biosynthesis protein%3B FO synthase%2C subunit 2~PFAM: Radical SAM superfamily~TIGRFAM: radical SAM domain protein%2C CofH subfamily%3B menaquinone biosynthesis protein%2C SCO4550 family gene gene2921 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2858 Sgly_2859 Sgly_2859 Sgly_2859 2896304 2898145 - homocysteine S-methyltransferase COGs: COG0646 Methionine synthase I (cobalamin-dependent) methyltransferase domain~InterPro IPR003726: IPR003171~KEGG: ckr:CKR_1635 bifunctional homocysteine S-methyltransferase/5%2C10-methylenetetrahydrofolate reductase protein~PFAM: Homocysteine S-methyltransferase%3B Methylenetetrahydrofolate reductase~SPTR: Methylenetetrahydrofolate reductase%3B~PFAM: Methylenetetrahydrofolate reductase%3B Homocysteine S-methyltransferase gene gene2922 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2859 Sgly_2860 Sgly_2860 Sgly_2860 2898142 2900436 - methionine synthase (B12-independent) COGs: COG0620 Methionine synthase II (cobalamin-independent)~HAMAP:5-methyltetrahydropteroyltriglutamate--homocy steineS-methyltransferase~InterPro IPR013215: IPR002629: IPR006276~KEGG: ckr:CKR_1636 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase~PFAM: Methionine synthase%2C vitamin-B12 independent%3B Cobalamin (vitamin B12)-independent methionine synthase MetE%2C N-terminal~PRIAM:5-methyltetrahydropteroyltriglutamate--homocy steineS-methyltransferase~SPTR:5-methyltetrahydropteroyltriglutamate--homocys teinemethyltransferase%3B~TIGRFAM:5-methyltetrahydropteroyltriglutamate--homo cysteineS-methyltransferase~PFAM: Cobalamin-independent synthase%2C N-terminal domain%3B Cobalamin-independent synthase%2C Catalytic domain~TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase gene gene2923 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2860 Sgly_2861 Sgly_2861 Sgly_2861 2900609 2901526 - transcriptional regulator%2C LysR family COGs: COG0583 Transcriptional regulator~InterPro IPR000847~KEGG: ccb:Clocel_0500 transcriptional regulator%2C LysR family~PFAM: HTH transcriptional regulator%2C LysR~SPTR: Transcriptional regulator%2C LysR family%3B~PFAM: Bacterial regulatory helix-turn-helix protein%2C lysR family%3B LysR substrate binding domain gene gene2924 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2861 Sgly_2862 Sgly_2862 Sgly_2862 2901619 2901954 - protein of unknown function DUF156 COGs: COG1937 conserved hypothetical protein~InterPro IPR003735~KEGG: clj:CLJU_c32140 hypothetical protein~PFAM: Protein of unknown function DUF156~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterised BCR%2C COG1937 gene gene2925 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2862 Sgly_2863 Sgly_2863 Sgly_2863 2902197 2903486 - O-acetylhomoserine sulfhydrolase COGs: COG2873 O-acetylhomoserine sulfhydrylase~InterPro IPR000277: IPR006235~KEGG: cth:Cthe_1842 O-acetylhomoserine/O-acetylserine sulfhydrylase~PFAM: Cys/Met metabolism%2C pyridoxal phosphate-dependent enzyme~PRIAM: Cysteine synthase~SPTR: O-acetylhomoserine/O-acetylserine sulfhydrylase%3B~TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase~PFAM: Cys/Met metabolism PLP-dependent enzyme~TIGRFAM: OAH/OAS sulfhydrylase gene gene2926 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2863 Sgly_2864 Sgly_2864 Sgly_2864 2903604 2905589 - NH(3)-dependent NAD(+) synthetase COGs: COG0171 NAD synthase~InterPro IPR003010: IPR003694~KEGG: cac:CA_C1782 NAD synthetase~PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase~PRIAM: NAD(+) synthase (glutamine-hydrolyzing)~SPTR: NH(3)-dependent NAD(+) synthase (NadE) fused to amidohydrolase domain%3B~TIGRFAM: NAD+ synthase~PFAM: NAD synthase%3B Carbon-nitrogen hydrolase~TIGRFAM: NAD+ synthetase gene gene2927 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2864 Sgly_2865 Sgly_2865 Sgly_2865 2905793 2906614 - Aminodeoxychorismate lyase COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase~InterPro IPR001544~KEGG: dae:Dtox_4189 aminotransferase class IV~PFAM: Aminotransferase%2C class IV~PRIAM: Aminodeoxychorismate lyase~SPTR: Aminotransferase class IV%3B~PFAM: Aminotransferase class IV gene gene2928 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2865 Sgly_2866 Sgly_2866 Sgly_2866 2906633 2906818 - hypothetical protein KEGG: hla:Hlac_2389 histidine kinase~SPTR: Histidine kinase gene gene2929 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2866 Sgly_2867 Sgly_2867 Sgly_2867 2906818 2907018 - pseudogene gene2930 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2867 Sgly_2868 Sgly_2868 Sgly_2868 2907228 2908721 - para-aminobenzoate synthase%2C subunit I COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I~InterPro IPR006805: IPR015890: IPR005802~KEGG: amt:Amet_2158 para-aminobenzoate synthase%2C subunit I~PFAM: Chorismate binding%2C C-terminal%3B Anthranilate synthase component I%2C N-terminal~PRIAM: Anthranilate synthase~SPTR: Para-aminobenzoate synthase%2C subunit I%3B~TIGRFAM: Para-aminobenzoate synthase%2C component I~PFAM: Anthranilate synthase component I%2C N terminal region%3B chorismate binding enzyme~TIGRFAM: aminodeoxychorismate synthase%2C component I%2C bacterial clade gene gene2931 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2868 Sgly_2869 Sgly_2869 Sgly_2869 2908772 2909578 - tryptophan synthase%2C alpha chain COGs: COG0159 Tryptophan synthase alpha chain~HAMAP: Tryptophan synthase%2C alpha chain~InterPro IPR002028~KEGG: amt:Amet_1083 tryptophan synthase subunit alpha~PFAM: Tryptophan synthase%2C alpha chain~PRIAM: Tryptophan synthase~SPTR: Tryptophan synthase alpha chain%3B~TIGRFAM: Tryptophan synthase%2C alpha chain~PFAM: Tryptophan synthase alpha chain~TIGRFAM: tryptophan synthase%2C alpha subunit gene gene2932 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2869 Sgly_2870 Sgly_2870 Sgly_2870 2909568 2910767 - tryptophan synthase%2C beta chain COGs: COG0133 Tryptophan synthase beta chain~HAMAP: Tryptophan synthase beta chain~InterPro IPR001926: IPR006654~KEGG: cce:Ccel_3218 tryptophan synthase subunit beta~PFAM: Pyridoxal phosphate-dependent enzyme%2C beta subunit~PRIAM: Tryptophan synthase~SPTR: Tryptophan synthase%2C beta subunit%3B~TIGRFAM: Tryptophan synthase%2C beta chain~PFAM: Pyridoxal-phosphate dependent enzyme~TIGRFAM: tryptophan synthase%2C beta subunit gene gene2933 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2870 Sgly_2871 Sgly_2871 Sgly_2871 2910760 2911425 - phosphoribosylanthranilate isomerase COGs: COG0135 Phosphoribosylanthranilate isomerase~InterPro IPR001240~KEGG: cth:Cthe_0871 phosphoribosylanthranilate isomerase~PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI)~PRIAM: Phosphoribosylanthranilate isomerase~SPTR: N-(5'-phosphoribosyl)anthranilate isomerase%3B~PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase gene gene2934 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2871 Sgly_2872 Sgly_2872 Sgly_2872 2911416 2912201 - indole-3-glycerol phosphate synthase COGs: COG0134 Indole-3-glycerol phosphate synthase~InterPro IPR013798~KEGG: cth:Cthe_0872 indole-3-glycerol-phosphate synthase~PFAM: Indole-3-glycerol phosphate synthase~PRIAM: Indole-3-glycerol-phosphate synthase~SPTR: Putative uncharacterized protein%3B~PFAM: Indole-3-glycerol phosphate synthase gene gene2935 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2872 Sgly_2873 Sgly_2873 Sgly_2873 2912198 2913229 - anthranilate phosphoribosyltransferase COGs: COG0547 Anthranilate phosphoribosyltransferase~HAMAP: Anthranilate phosphoribosyl transferase~InterPro IPR017459: IPR000312: IPR005940~KEGG: cth:Cthe_0873 anthranilate phosphoribosyltransferase~PFAM: Glycosyl transferase%2C family 3%3B Glycosyl transferase%2C family 3%2C N-terminal~PRIAM: Anthranilate phosphoribosyltransferase~SPTR: Anthranilate phosphoribosyltransferase%3B~TIGRFAM: Anthranilate phosphoribosyl transferase~PFAM: Glycosyl transferase family%2C a/b domain%3B Glycosyl transferase family%2C helical bundle domain~TIGRFAM: anthranilate phosphoribosyltransferase gene gene2936 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2873 Sgly_2874 Sgly_2874 Sgly_2874 2913226 2913810 - anthranilate synthase%2C component II COGs: COG0512 Anthranilate/para-aminobenzoate synthase component II~InterPro IPR000991: IPR006221~KEGG: cth:Cthe_0874 anthranilate synthase%2C component II~PFAM: Glutamine amidotransferase class-I%2C C-terminal~PRIAM: Anthranilate synthase~SPTR: Anthranilate synthase%2C component II%3B~TIGRFAM: Glutamine amidotransferase of anthranilate synthase~PFAM: Glutamine amidotransferase class-I~TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase gene gene2937 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2874 Sgly_2875 Sgly_2875 Sgly_2875 2913807 2915291 - anthranilate synthase%2C component I COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I~InterPro IPR006805: IPR015890: IPR005256~KEGG: cth:Cthe_0875 anthranilate synthase%2C component I~PFAM: Chorismate binding%2C C-terminal%3B Anthranilate synthase component I%2C N-terminal~PRIAM: Anthranilate synthase~SPTR: Anthranilate synthase%2C component I%3B~TIGRFAM: Anthranilate synthase component I~PFAM: Anthranilate synthase component I%2C N terminal region%3B chorismate binding enzyme~TIGRFAM: anthranilate synthase component I%2C non-proteobacterial lineages gene gene2938 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2875 Sgly_2876 Sgly_2876 Sgly_2876 2915727 2916971 - YibE/F family protein COGs: COG5438 multitransmembrane protein~InterPro IPR012507~KEGG: cno:NT01CX_0212 hypothetical protein~PFAM: YibE/F-like~SPTR: YibE/F family protein%3B~PFAM: YibE/F-like protein gene gene2939 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2876 Sgly_2877 Sgly_2877 Sgly_2877 2917296 2917736 + regulatory protein MarR InterPro IPR000835~KEGG: cbl:CLK_2797 MarR family transcriptional regulator~PFAM: HTH transcriptional regulator%2C MarR~SMART: HTH transcriptional regulator%2C MarR~SPTR: Transcriptional regulator%2C MarR family%3B~PFAM: MarR family gene gene2940 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2877 Sgly_2878 Sgly_2878 Sgly_2878 2917720 2918949 + major facilitator superfamily MFS_1 InterPro IPR011701~KEGG: dhd:Dhaf_1114 major facilitator superfamily MFS_1~PFAM: Major facilitator superfamily MFS-1~SPTR: Major facilitator superfamily MFS_1%3B~PFAM: Bacterial protein of unknown function (DUF894) gene gene2941 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2878 Sgly_2879 Sgly_2879 Sgly_2879 2918993 2919625 - Precorrin-8X methylmutase CbiC/CobH COGs: COG2082 Precorrin isomerase~InterPro IPR003722~KEGG: mru:mru_0894 precorrin-8X methylmutase CbiC~PFAM: Cobalamin (vitamin B12) biosynthesis CobH/CbiC%2C precorrin-8X methylmutase%2C core~SPTR: Precorrin isomerase%3B~PFAM: Precorrin-8X methylmutase gene gene2942 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2879 Sgly_2880 Sgly_2880 Sgly_2880 2919618 2921138 - adenosylcobyric acid synthase (glutamine-hydrolysing) COGs: COG1492 Cobyric acid synthase~HAMAP: Cobyric acid synthase CobQ~InterPro IPR011698: IPR004459~KEGG: cce:Ccel_1284 cobyric acid synthase~PFAM: CobB/CobQ-like glutamine amidotransferase~SPTR: Cobyric acid synthase%3B~TIGRFAM: Cobyric acid synthase CobQ~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain%3B CobB/CobQ-like glutamine amidotransferase domain~TIGRFAM: cobyric acid synthase CobQ gene gene2943 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2880 Sgly_2881 Sgly_2881 Sgly_2881 2921154 2922284 - Phosphoglycerate mutase COGs: COG3635 phosphoglycerate mutase AP superfamily~InterPro IPR019304: IPR006124~KEGG: apo:Arcpr_1280 proposed homoserine kinase~PFAM: 2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase%3B Metalloenzyme~PRIAM: Phosphoglycerate mutase~SPTR: Proposed homoserine kinase%3B~PFAM: Metalloenzyme superfamily%3B 2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase~TIGRFAM: 2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase%2C archaeal form gene gene2944 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2881 Sgly_2882 Sgly_2882 Sgly_2882 2922259 2923347 - aminotransferase class I and II COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase~InterPro IPR004839~KEGG: cce:Ccel_1287 aminotransferase class I and II~PFAM: Aminotransferase%2C class I/II~SPTR: Putative uncharacterized protein%3B~PFAM: Aminotransferase class I and II~TIGRFAM: L-threonine-O-3-phosphate decarboxylase%3B histidinol-phosphate aminotransferase gene gene2945 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2882 Sgly_2883 Sgly_2883 Sgly_2883 2923364 2924329 - adenosylcobinamide-phosphate synthase COGs: COG1270 Cobalamin biosynthesis protein CobD/CbiB~HAMAP: Cobalamin biosynthesis protein cbiB~InterPro IPR004485~KEGG: cce:Ccel_1286 cobalamin biosynthesis protein CobD~PFAM: Cobalamin (vitamin B12) biosynthesis CbiB~SPTR: Cobalamin biosynthesis protein CobD%3B~TIGRFAM: Cobalamin (vitamin B12) biosynthesis CbiB~PFAM: CobD/Cbib protein~TIGRFAM: cobalamin biosynthesis protein CobD gene gene2946 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2883 Sgly_2884 Sgly_2884 Sgly_2884 2924406 2925791 - hydrogenobyrinic acid a%2Cc-diamide synthase (glutamine-hydrolysing)%3B cobyrinate a%2Cc-diamide synthase COGs: COG1797 Cobyrinic acid a c-diamide synthase~HAMAP: Cobyrinic acid a%2Cc-diamide synthase CbiA~InterPro IPR011698: IPR004484~KEGG: cce:Ccel_1283 cobyrinic acid a%2Cc-diamide synthase~PFAM: CobB/CobQ-like glutamine amidotransferase~SPTR: Cobyrinic acid a%2Cc-diamide synthase%3B~TIGRFAM: Cobyrinic acid a%2Cc-diamide synthase CbiA~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain%3B CobB/CobQ-like glutamine amidotransferase domain~TIGRFAM: cobyrinic acid a%2Cc-diamide synthase gene gene2947 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2884 Sgly_2885 Sgly_2885 Sgly_2885 2925788 2927002 - precorrin-6y C5%2C15-methyltransferase (decarboxylating)%2C CbiE subunit COGs: COG2242 Precorrin-6B methylase 2~InterPro IPR000878: IPR012818: IPR014008~KEGG: cpy:Cphy_1379 precorrin-6x reductase~PFAM: Tetrapyrrole methylase~PRIAM: Precorrin-6Y C(5%2C15)-methyltransferase (decarboxylating)~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Cobalamin (vitamin B12) biosynthesis CbiE%2C precorrin-6Y methyltransferase%2C core%3B Cobalamin (vitamin B12) biosynthesis CbiT%2C precorrin-6Y methyltransferase-core~PFAM: Ribosomal RNA adenine dimethylase%3B Tetrapyrrole (Corrin/Porphyrin) Methylases~TIGRFAM: precorrin-6Y C5%2C15-methyltransferase (decarboxylating)%2C CbiT subunit%3B precorrin-6y C5%2C15-methyltransferase (decarboxylating)%2C CbiE subunit gene gene2948 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2885 Sgly_2886 Sgly_2886 Sgly_2886 2927019 2927381 - cobalamin (vitamin B12) biosynthesis CbiX protein COGs: COG2138 conserved hypothetical protein~InterPro IPR002762~KEGG: cce:Ccel_1281 cobalamin (vitamin B12) biosynthesis CbiX protein~PFAM: Cobalamin (vitamin B12) biosynthesis CbiX~SPTR: Cobalamin (Vitamin B12) biosynthesis CbiX protein%3B~PFAM: CbiX gene gene2949 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2886 Sgly_2887 Sgly_2887 Sgly_2887 2927405 2928685 - glutamate-1-semialdehyde 2%2C1-aminomutase COGs: COG0001 Glutamate-1-semialdehyde aminotransferase~HAMAP: Glutamate-1-semialdehyde 2%2C1-aminomutase~InterPro IPR005814: IPR004639~KEGG: cpy:Cphy_1373 glutamate-1-semialdehyde aminotransferase~PFAM: Aminotransferase class-III~PRIAM: Glutamate-1-semialdehyde 2%2C1-aminomutase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Tetrapyrrole biosynthesis%2C glutamate-1-semialdehyde aminotransferase~PFAM: Aminotransferase class-III~TIGRFAM: glutamate-1-semialdehyde-2%2C1-aminomutase gene gene2950 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2887 Sgly_2888 Sgly_2888 Sgly_2888 2928685 2929668 - porphobilinogen synthase COGs: COG0113 Delta-aminolevulinic acid dehydratase~InterPro IPR001731~KEGG: cpy:Cphy_1788 delta-aminolevulinic acid dehydratase~PFAM: Tetrapyrrole biosynthesis%2C porphobilinogen synthase~PRIAM: Porphobilinogen synthase~SPTR: Delta-aminolevulinic acid dehydratase%3B~manually curated~PFAM: Delta-aminolevulinic acid dehydratase gene gene2951 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2888 Sgly_2889 Sgly_2889 Sgly_2889 2929589 2930479 - precorrin-6x reductase COGs: COG2099 Precorrin-6x reductase~InterPro IPR003723~KEGG: cce:Ccel_1276 precorrin-6x reductase~PFAM: Cobalamin (vitamin B12) biosynthesis CobK/CbiJ%2C precorrin-6x reductase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobK/CbiJ%2C precorrin-6x reductase~PFAM: Precorrin-6x reductase CbiJ/CobK~TIGRFAM: precorrin-6x reductase gene gene2952 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2889 Sgly_2890 Sgly_2890 Sgly_2890 2930466 2931200 - precorrin-3 methyltransferase COGs: COG1010 Precorrin-3B methylase~InterPro IPR000878: IPR006363~KEGG: cpy:Cphy_1378 precorrin-3B C17-methyltransferase~PFAM: Tetrapyrrole methylase~PRIAM: Precorrin-3B C(17)-methyltransferase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobJ/CibH%2C precorrin-3B C17-methyltransferase%2C core~PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases~TIGRFAM: precorrin-3B C17-methyltransferase gene gene2953 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2890 Sgly_2891 Sgly_2891 Sgly_2891 2931228 2932268 - cobalamin (vitamin B12) biosynthesis CbiG protein COGs: COG2073 Cobalamin biosynthesis protein CbiG~InterPro IPR002750~KEGG: cpy:Cphy_1377 cobalamin (vitamin B12) biosynthesis CbiG protein~PFAM: Cobalamin (vitamin B12) biosynthesis CbiG%2C core~SPTR: Cobalamin (Vitamin B12) biosynthesis CbiG protein%3B~PFAM: Cobalamin biosynthesis central region%3B Cobalamin synthesis G C-terminus%3B Cobalamin synthesis G N-terminal gene gene2954 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2891 Sgly_2892 Sgly_2892 Sgly_2892 2932265 2933020 - precorrin-4 C11-methyltransferase COGs: COG2875 Precorrin-4 methylase~InterPro IPR000878: IPR006362~KEGG: cce:Ccel_1272 precorrin-4 C11-methyltransferase~PFAM: Tetrapyrrole methylase~PRIAM: Precorrin-4 C(11)-methyltransferase~SPTR: Precorrin-4 C11-methyltransferase%3B~TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobM/CbiF%2C precorrin-4 C11-methyltransferase%2C core~PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases~TIGRFAM: precorrin-4 C11-methyltransferase gene gene2955 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2892 Sgly_2893 Sgly_2893 Sgly_2893 2933017 2933730 - precorrin-2 C20-methyltransferase%3B cobalt-factor II C20-methyltransferase COGs: COG2243 Precorrin-2 methylase~InterPro IPR000878: IPR006364~KEGG: cpy:Cphy_1375 precorrin-2 C20-methyltransferase~PFAM: Tetrapyrrole methylase~PRIAM: Precorrin-2 C(20)-methyltransferase~SPTR: Precorrin-2 C20-methyltransferase%3B~TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobI/CbiL%2C precorrin-2 C20-methyltransferase%2C core~PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases~TIGRFAM: precorrin-2 C20-methyltransferase gene gene2956 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2893 Sgly_2894 Sgly_2894 Sgly_2894 2933727 2934863 - cobalt-precorrin-6A synthase (deacetylating) COGs: COG1903 Cobalamin biosynthesis protein CbiD~HAMAP: Cobalamin (vitamin B12) biosynthesis CbiD~InterPro IPR002748~KEGG: shi:Shel_21220 cobalamin biosynthesis protein CbiD~PFAM: Cobalamin (vitamin B12) biosynthesis CbiD~SPTR: Putative cobalt-precorrin-6A synthase [deacetylating]%3B~TIGRFAM: Cobalamin (vitamin B12) biosynthesis CbiD~PFAM: CbiD~TIGRFAM: cobalamin biosynthesis protein CbiD gene gene2957 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2894 Sgly_2895 Sgly_2895 Sgly_2895 2934882 2935727 - cobalt ABC transporter%2C ATPase subunit COGs: COG1122 ABC-type cobalt transport system ATPase component~InterPro IPR003439: IPR003593: IPR005876~KEGG: cpf:CPF_0188 cobalt transporter ATP-binding subunit~PFAM: ABC transporter-like~PRIAM: Phosphonate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Cobalt ABC transporter%2C ATP-binding protein%3B~TIGRFAM: Cobalt transport protein ATP-binding subunit~PFAM: ABC transporter%3B Cobalt ATP-binding cassette C terminal~TIGRFAM: cobalt transport protein ATP-binding subunit gene gene2958 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2895 Sgly_2896 Sgly_2896 Sgly_2896 2935724 2936521 - cobalt ABC transporter%2C inner membrane subunit CbiQ COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter~InterPro IPR003339: IPR012809~KEGG: dhd:Dhaf_2603 cobalt ABC transporter%2C inner membrane subunit CbiQ~PFAM: Cobalt transport protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Cobalt ABC transporter CbiQ%2C permease subunit~PFAM: Cobalt transport protein~TIGRFAM: cobalt ABC transporter%2C permease protein CbiQ gene gene2959 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2896 Sgly_2897 Sgly_2897 Sgly_2897 2936518 2936838 - Cobalt transport protein cbiN COGs: COG1930 ABC-type cobalt transport system periplasmic component~HAMAP: Cobalt transport protein cbiN~InterPro IPR003705~KEGG: cno:NT01CX_1330 cobalt transport protein CbiN~PFAM: Cobalt transport protein CbiN~SPTR: Cobalt transport protein cbiN%3B~TIGRFAM: Cobalt transport protein CbiN~PFAM: Cobalt transport protein component CbiN~TIGRFAM: cobalt transport protein gene gene2960 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2897 Sgly_2898 Sgly_2898 Sgly_2898 2936845 2937588 - cobalamin biosynthesis protein CbiM COGs: COG0310 ABC-type Co2+ transport system permease component~InterPro IPR002751: IPR018024~KEGG: dhd:Dhaf_2601 cobalt transport protein CbiM~PFAM: Cobalamin (vitamin B12) biosynthesis CbiM~SPTR: Cobalamin biosynthesis protein CbiM%3B~TIGRFAM: Cobalamin (vitamin B12) biosynthesis CbiM%2C related~PFAM: Cobalt uptake substrate-specific transmembrane region~TIGRFAM: cobalamin biosynthesis protein CbiM gene gene2961 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2898 Sgly_2899 Sgly_2899 Sgly_2899 2937624 2938151 - cob(I)yrinic acid a%2Cc-diamide adenosyltransferase COGs: COG2109 ATP:corrinoid adenosyltransferase~InterPro IPR003724~KEGG: cce:Ccel_1333 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP~PFAM: Adenosylcobalamin biosynthesis%2C ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR~SPTR: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP%3B~PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP~TIGRFAM: cob(I)alamin adenosyltransferase gene gene2962 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2899 Sgly_2900 Sgly_2900 Sgly_2900 2938196 2938591 - cobalbumin biosynthesis protein COGs: COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase~InterPro IPR003203~KEGG: cbe:Cbei_1266 cobalamin biosynthesis protein CobU%2C putative%2C truncation~PFAM: Cobinamide kinase/cobinamide phosphate guanyltransferase~SPTR: Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase%3B~PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase gene gene2963 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2900 Sgly_2901 Sgly_2901 Sgly_2901 2938640 2939398 - Cobalamin synthase COGs: COG0368 Cobalamin-5-phosphate synthase~HAMAP: Cobalamin (vitamin B12) biosynthesis CobS%2C cobalamin-5-phosphate synthase~InterPro IPR003805~KEGG: bmq:BMQ_1998 adenosylcobinamide-GDP ribazoletransferase~PFAM: Cobalamin (vitamin B12) biosynthesis CobS%2C cobalamin-5-phosphate synthase~SPTR: Cobalamin synthase%3B~TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobS%2C cobalamin-5-phosphate synthase~PFAM: Cobalamin-5-phosphate synthase~TIGRFAM: cobalamin 5'-phosphate synthase/cobalamin synthase gene gene2964 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2901 Sgly_2902 Sgly_2902 Sgly_2902 2939406 2939984 - cobalbumin biosynthesis protein COGs: COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase~InterPro IPR003203~KEGG: bmd:BMD_1953 bifunctional adenosylcobalamin biosynthesis protein CobU~PFAM: Cobinamide kinase/cobinamide phosphate guanyltransferase~SPTR: Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase%3B~PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase gene gene2965 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2902 Sgly_2903 Sgly_2903 Sgly_2903 2940021 2941091 - Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase COGs: COG2038 NaMN:DMB phosphoribosyltransferase~HAMAP: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase%2C core%2C prokaryotic~InterPro IPR003200: IPR017846~KEGG: cno:NT01CX_2077 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase~PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like%2C core~PRIAM: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase~SPTR: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase%3B~TIGRFAM:Nicotinate-nucleotide- dimethylbenzimidazole phosphoribosyltransferase%2C core%2C prokaryotic~PFAM: Phosphoribosyltransferase~TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase gene gene2966 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2903 Sgly_2904 Sgly_2904 Sgly_2904 2941610 2942044 + iron (metal) dependent repressor%2C DtxR family COGs: COG1321 Mn-dependent transcriptional regulator protein~InterPro IPR001367~KEGG: drm:Dred_2721 iron dependent repressor~PFAM: Iron dependent repressor~SMART: Iron dependent repressor~SPTR: Iron dependent repressor%3B~PFAM: Iron dependent repressor%2C metal binding and dimerisation domain%3B Iron dependent repressor%2C N-terminal DNA binding domain gene gene2967 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2904 Sgly_2905 Sgly_2905 Sgly_2905 2942101 2943501 - nucleoside recognition domain protein COGs: COG0370 Fe2+ transport system protein B~InterPro IPR011619: IPR011642: IPR011640~KEGG: dsy:DSY2609 hypothetical protein~PFAM: Nucleoside recognition%3B Ferrous iron transport protein B%2C N-terminal%3B Ferrous iron transport protein B%2C C-terminal~SPTR: Putative uncharacterized protein%3B~PFAM: Ferrous iron transport protein B C terminus%3B Nucleoside recognition gene gene2968 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2905 Sgly_2906 Sgly_2906 Sgly_2906 2943498 2944280 - small GTP-binding protein COGs: COG0370 Fe2+ transport system protein B~InterPro IPR002917: IPR011619: IPR005225~KEGG: dsy:DSY2610 hypothetical protein~PFAM: GTP-binding protein%2C HSR1-related%3B Ferrous iron transport protein B%2C N-terminal~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Small GTP-binding protein~PFAM: Ferrous iron transport protein B~TIGRFAM: small GTP-binding protein domain gene gene2969 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2906 Sgly_2907 Sgly_2907 Sgly_2907 2944315 2944575 - FeoA family protein COGs: COG1918 Fe2+ transport system protein A~InterPro IPR007167~KEGG: cth:Cthe_1403 hypothetical protein~PFAM: Ferrous iron transporter%2C FeoA subunit~SPTR: FeoA%3B~PFAM: FeoA domain gene gene2970 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2907 Sgly_2908 Sgly_2908 Sgly_2908 2944807 2945520 - hypothetical protein KEGG: tde:TDE0272 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2971 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2908 Sgly_2909 Sgly_2909 Sgly_2909 2945471 2947222 - Xenobiotic-transporting ATPase COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterPro IPR001140: IPR003439: IPR003593~KEGG: amt:Amet_3807 ABC transporter related~PFAM: ABC transporter-like%3B ABC transporter%2C transmembrane domain~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related%3B~PFAM: ABC transporter%3B ABC transporter transmembrane region gene gene2972 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2909 Sgly_2910 Sgly_2910 Sgly_2910 2947215 2949044 - Xenobiotic-transporting ATPase COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterPro IPR001140: IPR003439: IPR003593~KEGG: amt:Amet_3808 ABC transporter related~PFAM: ABC transporter-like%3B ABC transporter%2C transmembrane domain~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related%3B~PFAM: ABC transporter%3B ABC transporter transmembrane region gene gene2973 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2910 Sgly_2911 Sgly_2911 Sgly_2911 2949319 2949909 - hypothetical protein KEGG: ctc:CTC00431 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2974 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2911 Sgly_2912 Sgly_2912 Sgly_2912 2950059 2950490 - flavodoxin COGs: COG0426 flavoprotein~InterPro IPR008254: IPR010087~KEGG: dhd:Dhaf_0741 flavodoxin~PFAM: Flavodoxin/nitric oxide synthase~SPTR: Flavodoxin%3B~TIGRFAM: Flavodoxin%2C short chain~PFAM: Flavodoxin~TIGRFAM: flavodoxin%2C short chain gene gene2975 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2912 Sgly_2913 Sgly_2913 Sgly_2913 2950516 2950701 - hypothetical protein gene gene2976 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2913 Sgly_2914 Sgly_2914 Sgly_2914 2951027 2952760 - NAD(P)-dependent iron-only hydrogenase catalytic subunit COGs: COG4624 Iron only hydrogenase large subunit C-terminal domain~InterPro IPR001041: IPR019574: IPR004108: IPR003149: IPR 013352~KEGG: cce:Ccel_2467 hydrogenase%2C Fe-only~PFAM: Iron hydrogenase%2C large subunit%2C C-terminal%3B NADH:ubiquinone oxidoreductase%2C subunit G%2C iron-sulphur binding%3B Ferredoxin%3B Iron hydrogenase%2C small subunit-like~SPTR: Hydrogenase%2C Fe-only%3B~TIGRFAM: Iron hydrogenase%2C subset~PFAM: Iron only hydrogenase large subunit%2C C-terminal domain%3B NADH-ubiquinone oxidoreductase-G iron-sulfur binding region%3B Iron hydrogenase small subunit~TIGRFAM: hydrogenases%2C Fe-only gene gene2977 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2914 Sgly_2915 Sgly_2915 Sgly_2915 2952763 2954046 - NADH dehydrogenase subunit F COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit~InterPro IPR011538: IPR019554: IPR019575~KEGG: tna:CTN_0458 NADP-reducing hydrogenase%2C subunit C~PFAM: NADH:ubiquinone oxidoreductase%2C 51kDa subunit%3B Soluble ligand binding domain%3B NADH ubiquinone oxidoreductase%2C F subunit%2C iron sulphur binding~PRIAM: NADH dehydrogenase (quinone)~SPTR: NADH dehydrogenase (Quinone)%3B~PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region%3B Respiratory-chain NADH dehydrogenase 51 Kd subunit%3B SLBB domain gene gene2978 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2915 Sgly_2916 Sgly_2916 Sgly_2916 2954046 2954510 - NADH dehydrogenase (quinone) COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit~InterPro IPR002023~KEGG: sat:SYN_02139 NADH-quinone oxidoreductase chain F~PFAM: NADH:ubiquinone oxidoreductase%2C 24kDa subunit~PRIAM: NADH dehydrogenase (quinone)~SPTR: NADH dehydrogenase (Ubiquinone) 24 kDa subunit%3B~PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit gene gene2979 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2916 Sgly_2917 Sgly_2917 Sgly_2917 2954941 2956704 - ATP-dependent DNA helicase%2C RecQ-like protein COGs: COG0514 Superfamily II DNA helicase~InterPro IPR011545: IPR001650: IPR018982: IPR002121: IPR 014001: IPR006293: IPR018329~KEGG: dhd:Dhaf_2928 ATP-dependent DNA helicase RecQ~PFAM: RQC domain%3B DNA/RNA helicase%2C C-terminal%3B DNA/RNA helicase%2C DEAD/DEAH box type%2C N-terminal%3B Helicase/RNase D C-terminal%2C HRDC domain~SMART: DNA/RNA helicase%2C C-terminal%3B DEAD-like helicase%2C N-terminal%3B Helicase/RNase D C-terminal%2C HRDC domain~SPTR: ATP-dependent DNA helicase RecQ%3B~TIGRFAM: DNA helicase%2C ATP-dependent%2C RecQ type%2C bacterial%3B DNA helicase%2C ATP-dependent%2C RecQ type%2C N-terminal~PFAM: Helicase conserved C-terminal domain%3B RQC domain%3B HRDC domain%3B DEAD/DEAH box helicase~TIGRFAM: ATP-dependent DNA helicase RecQ%3B ATP-dependent DNA helicase%2C RecQ family gene gene2980 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2917 Sgly_2918 Sgly_2918 Sgly_2918 2956897 2958633 + Xenobiotic-transporting ATPase COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterPro IPR001140: IPR003439: IPR003593~KEGG: dhd:Dhaf_2528 ABC transporter related~PFAM: ABC transporter-like%3B ABC transporter%2C transmembrane domain~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ABC transporter transmembrane region%3B ABC transporter gene gene2981 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2918 Sgly_2919 Sgly_2919 Sgly_2919 2958673 2959326 - peptidase M50 COGs: COG1994 Zn-dependent protease~InterPro IPR008915~KEGG: cce:Ccel_1748 peptidase M50~PFAM: Peptidase M50~SPTR: Peptidase M50%3B~PFAM: Peptidase family M50 gene gene2982 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2919 Sgly_2920 Sgly_2920 Sgly_2920 2959308 2959703 - NUDIX hydrolase COGs: COG1051 ADP-ribose pyrophosphatase~InterPro IPR000086~KEGG: cac:CA_C2828 MutT/NUDIX family hydrolase/pyrophosphatase~PFAM: NUDIX hydrolase domain~SPTR: Putative uncharacterized protein%3B~PFAM: NUDIX domain~TIGRFAM: mutator mutT protein gene gene2983 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2920 Sgly_2921 Sgly_2921 Sgly_2921 2959781 2961019 - nucleic acid binding OB-fold tRNA/helicase-type InterPro IPR004365~KEGG: pcb:PC000361.00.0 hypothetical protein~PFAM: Nucleic acid binding%2C OB-fold%2C tRNA/helicase-type~SPTR: Putative uncharacterized protein%3B~PFAM: OB-fold nucleic acid binding domain gene gene2984 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2921 Sgly_2922 Sgly_2922 Sgly_2922 2961138 2963495 - diguanylate cyclase and metal dependent phosphohydrolase COGs: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain~InterPro IPR013656: IPR000160: IPR006674: IPR000014~KEGG: mta:Moth_0689 putative PAS/PAC sensor protein~PFAM: Diguanylate cyclase%2C predicted%3B PAS fold-4%3B Metal-dependent phosphohydrolase%2C HD subdomain~SMART: Diguanylate cyclase%2C predicted%3B PAS~SPTR: Putative PAS/PAC sensor protein%3B~TIGRFAM: Diguanylate cyclase%2C predicted%3B PAS~PFAM: HD domain%3B GGDEF domain%3B Putative sugar diacid recognition%3B PAS fold~TIGRFAM: PAS domain S-box%3B diguanylate cyclase (GGDEF) domain gene gene2985 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2922 Sgly_2923 Sgly_2923 Sgly_2923 2963634 2964374 - two component transcriptional regulator%2C winged helix family COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR001789: IPR001867~KEGG: dhd:Dhaf_2918 two component transcriptional regulator%2C winged helix family~PFAM: Signal transduction response regulator%2C receiver domain%3B Signal transduction response regulator%2C C-terminal~SMART: Signal transduction response regulator%2C receiver domain~SPTR: Putative uncharacterized protein%3B~PFAM: Response regulator receiver domain%3B Transcriptional regulatory protein%2C C terminal gene gene2986 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2923 Sgly_2924 Sgly_2924 Sgly_2924 2964361 2965842 - integral membrane sensor signal transduction histidine kinase COGs: COG0642 Signal transduction histidine kinase~InterPro IPR003660: IPR003661: IPR003594~KEGG: dsy:DSY1767 hypothetical protein~PFAM: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain%3B HAMP linker domain~SMART: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain%3B HAMP linker domain~SPTR: Putative uncharacterized protein%3B~PFAM: HAMP domain%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain gene gene2987 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2924 Sgly_2925 Sgly_2925 Sgly_2925 2965852 2966604 - membrane spanning protein KEGG: dhd:Dhaf_2921 membrane spanning protein~SPTR: Putative uncharacterized protein gene gene2988 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2925 Sgly_2926 Sgly_2926 Sgly_2926 2966576 2967403 - ABC transporter related protein COGs: COG1131 ABC-type multidrug transport system ATPase component~InterPro IPR003439: IPR003593~KEGG: dhd:Dhaf_2922 ABC transporter related~PFAM: ABC transporter-like~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ABC transporter gene gene2989 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2926 Sgly_2927 Sgly_2927 Sgly_2927 2967438 2968679 - hypothetical protein KEGG: dhd:Dhaf_2923 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2990 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2927 Sgly_2928 Sgly_2928 Sgly_2928 2968773 2969966 - major facilitator superfamily MFS_1 COGs: COG2814 Arabinose efflux permease~InterPro IPR011701~KEGG: cbe:Cbei_1923 major facilitator transporter~PFAM: Major facilitator superfamily MFS-1~SPTR: Major facilitator superfamily MFS_1%3B~PFAM: Major Facilitator Superfamily gene gene2991 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2928 Sgly_2929 Sgly_2929 Sgly_2929 2969988 2970701 - glutamine amidotransferase class-I COGs: COG0518 GMP synthase - Glutamine amidotransferase domain~InterPro IPR000991~KEGG: ccb:Clocel_3264 glutamine amidotransferase class-I~PFAM: Glutamine amidotransferase class-I%2C C-terminal~SPTR: Glutamine amidotransferase class-I%3B~PFAM: Glutamine amidotransferase class-I gene gene2992 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2929 Sgly_2930 Sgly_2930 Sgly_2930 2970743 2974564 - ATP-dependent helicase/nuclease subunit A COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)~HAMAP: ATP-dependent helicase/nuclease subunit A~InterPro IPR000212: IPR014152~KEGG: cth:Cthe_2039 DNA helicase/exodeoxyribonuclease V%2C subunit A~PFAM: DNA helicase%2C UvrD/REP type~SPTR: ATP-dependent helicase/nuclease subunit A%3B~TIGRFAM: DNA helicase (recombination )%2C AddA type~PFAM: UvrD/REP helicase~TIGRFAM: recombination helicase AddA%2C Firmicutes type gene gene2993 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2930 Sgly_2931 Sgly_2931 Sgly_2931 2974557 2978000 - DNA helicase/exodeoxyribonuclease V%2C subunit B COGs: COG3857 ATP-dependent nuclease subunit B~HAMAP: ATP-dependent helicase/deoxyribonuclease subunit B~InterPro IPR014140~KEGG: cth:Cthe_2040 DNA helicase/exodeoxyribonuclease V%2C subunit B~SPTR: ATP-dependent nuclease subunit B%3B~TIGRFAM: ATP-dependent nuclease subunit AddB~PFAM: Exodeoxyribonuclease V%2C gamma subunit~TIGRFAM: ATP-dependent nuclease subunit B gene gene2994 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2931 Sgly_2932 Sgly_2932 Sgly_2932 2978058 2978399 - transcriptional regulator%2C HxlR family COGs: COG1733 transcriptional regulator protein~InterPro IPR002577~KEGG: clj:CLJU_c26360 putative transcriptional regulator~PFAM: Helix-turn-helix%2C HxlR type~SPTR: Transcriptional regulator%2C HxlR family%3B~PFAM: HxlR-like helix-turn-helix gene gene2995 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2932 Sgly_2933 Sgly_2933 Sgly_2933 2978597 2979178 + NADPH-dependent FMN reductase COGs: COG0655 Multimeric flavodoxin WrbA~InterPro IPR005025~KEGG: deg:DehalGT_0983 NADPH-dependent FMN reductase~PFAM: NADPH-dependent FMN reductase~SPTR: Putative iron-sulfur flavoprotein%3B~PFAM: NADPH-dependent FMN reductase gene gene2996 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2933 Sgly_2934 Sgly_2934 Sgly_2934 2979271 2980167 + Phosphatidylserine decarboxylase proenzyme COGs: COG0688 Phosphatidylserine decarboxylase~HAMAP: Phosphatidylserine decarboxylase proenzyme~InterPro IPR003817: IPR005221~KEGG: amt:Amet_4198 phosphatidylserine decarboxylase~PFAM: Phosphatidylserine decarboxylase-related~PRIAM: Phosphatidylserine decarboxylase~SPTR: Phosphatidylserine decarboxylase%3B~TIGRFAM: Phosphatidylserine decarboxylase~PFAM: Phosphatidylserine decarboxylase~TIGRFAM: phosphatidylserine decarboxylase precursor gene gene2997 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2934 Sgly_2935 Sgly_2935 Sgly_2935 2980183 2982354 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain~InterPro IPR013655: IPR000160: IPR001633: IPR001610: IPR 000014~KEGG: tte:TTE1081 diguanylate cyclase/phosphodiesterase~PFAM: Diguanylate phosphodiesterase%2C predicted%3B Diguanylate cyclase%2C predicted%3B PAS fold-3~PRIAM: Diguanylate kinase~SMART: Diguanylate phosphodiesterase%2C predicted%3B Diguanylate cyclase%2C predicted%3B PAC motif~SPTR: PAS fold family protein%3B~TIGRFAM: Diguanylate cyclase%2C predicted%3B PAS~PFAM: EAL domain%3B GGDEF domain%3B PAS fold~TIGRFAM: PAS domain S-box%3B diguanylate cyclase (GGDEF) domain gene gene2998 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2935 Sgly_2936 Sgly_2936 Sgly_2936 2982530 2985970 + pyruvate carboxylase COGs: COG1038 Pyruvate carboxylase~InterPro IPR005481: IPR005479: IPR005482: IPR000891: IPR 003379: IPR000089: IPR005930~KEGG: swo:Swol_0519 pyruvate carboxylase~PFAM: Carbamoyl phosphate synthetase%2C large subunit%2C ATP-binding%3B Carbamoyl phosphate synthase%2C large subunit%2C N-terminal%3B Biotin carboxylase%2C C-terminal%3B Pyruvate carboxyltransferase%3B Carboxylase%2C conserved domain%3B Biotin/lipoyl attachment~PRIAM: Pyruvate carboxylase~SPTR: Pyruvate carboxylase%2C PYKA%3B~TIGRFAM: Pyruvate carboxylase~PFAM: Carbamoyl-phosphate synthase L chain%2C ATP binding domain%3B HMGL-like%3B Biotin carboxylase C-terminal domain%3B Carbamoyl-phosphate synthase L chain%2C N-terminal domain%3B Biotin-requiring enzyme%3B Conserved carboxylase domain~TIGRFAM: pyruvate carboxylase gene gene2999 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2936 Sgly_2937 Sgly_2937 Sgly_2937 2986090 2986794 + Sigma 54 interacting domain protein COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component~InterPro IPR003439: IPR003593~KEGG: dsy:DSY4805 hypothetical protein~PFAM: ABC transporter-like~PRIAM: Phosphonate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ABC transporter gene gene3000 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2937 Sgly_2938 Sgly_2938 Sgly_2938 2986867 2989242 + protein of unknown function DUF214 COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component~InterPro IPR003838~KEGG: dhd:Dhaf_4677 protein of unknown function DUF214~PFAM: Protein of unknown function DUF214%2C permase predicted~SPTR: Putative uncharacterized protein%3B~manually curated~PFAM: Predicted permease gene gene3001 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2938 Sgly_2939 Sgly_2939 Sgly_2939 2989325 2990641 + efflux transporter%2C RND family%2C MFP subunit COGs: COG1566 Multidrug resistance efflux pump~InterPro IPR000089: IPR006143~KEGG: dhd:Dhaf_4678 efflux transporter%2C RND family%2C MFP subunit~PFAM: Biotin/lipoyl attachment~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Secretion protein HlyD~PFAM: HlyD family secretion protein~TIGRFAM: RND family efflux transporter%2C MFP subunit gene gene3002 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2939 Sgly_2940 Sgly_2940 Sgly_2940 2990973 2991110 - hypothetical protein SPTR: Conserved domain protein gene gene3003 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2940 Sgly_2941 Sgly_2941 Sgly_2941 2991110 2991298 - hypothetical protein KEGG: ecb:100063098 RUN and FYVE domain containing 2~SPTR: Transcription factor gene gene3004 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2941 Sgly_2942 Sgly_2942 Sgly_2942 2991298 2993016 - hypothetical protein KEGG: apr:Apre_0859 hypothetical protein~SPTR: Predicted protein gene gene3005 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2942 Sgly_2943 Sgly_2943 Sgly_2943 2993093 2994259 - RNA-directed DNA polymerase (Reverse transcriptase) InterPro IPR000477~KEGG: drm:Dred_1227 RNA-directed DNA polymerase (reverse transcriptase)~PFAM: RNA-directed DNA polymerase (reverse transcriptase)~SPTR: RNA-directed DNA polymerase%3B~PFAM: Reverse transcriptase (RNA-dependent DNA polymerase) gene gene3006 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2943 Sgly_2944 Sgly_2944 Sgly_2944 2994480 2994815 - hypothetical protein KEGG: drm:Dred_1226 hypothetical protein~SPTR: Predicted protein%3B~PFAM: S23 ribosomal protein gene gene3007 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2944 Sgly_2945 Sgly_2945 Sgly_2945 2994796 2995026 - hypothetical protein KEGG: ath:AT4G04695 CPK31%3B ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase~SPTR: Predicted protein gene gene3008 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2945 Sgly_2946 Sgly_2946 Sgly_2946 2995058 2995372 - hypothetical protein KEGG: bbe:BBR47_53600 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3009 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2946 Sgly_2947 Sgly_2947 Sgly_2947 2995356 2995679 - hypothetical protein KEGG: dae:Dtox_4253 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3010 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2947 Sgly_2948 Sgly_2948 Sgly_2948 2995682 2996521 - hypothetical protein KEGG: pmx:PERMA_1821 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3011 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2948 Sgly_2949 Sgly_2949 Sgly_2949 2996526 2997656 - hypothetical protein COGs: COG3299 Uncharacterized homolog of phage Mu protein gp47~KEGG: pmx:PERMA_1809 hypothetical protein~SPTR: Baseplate J family protein%3B~PFAM: Baseplate J-like protein gene gene3012 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2949 Sgly_2950 Sgly_2950 Sgly_2950 2997649 2998062 - baseplate assembly protein%2C putative KEGG: dvu:DVU1103 baseplate assembly protein%2C putative~SPTR: Predicted protein gene gene3013 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2950 Sgly_2951 Sgly_2951 Sgly_2951 2998062 2998346 - hypothetical protein KEGG: mma:MM_2821 tryptophan synthase subunit alpha~SPTR: Predicted protein gene gene3014 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2951 Sgly_2952 Sgly_2952 Sgly_2952 2998364 2999119 - hypothetical protein KEGG: coc:Coch_0642 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3015 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2952 Sgly_2953 Sgly_2953 Sgly_2953 2999136 2999729 - hypothetical protein KEGG: dvm:DvMF_1299 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3016 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2953 Sgly_2954 Sgly_2954 Sgly_2954 2999732 3002170 - phage tail tape measure protein%2C TP901 family InterPro IPR010090~KEGG: dde:Dde_0934 phage tail tape measure protein TP901%2C core region~PFAM: Phage tail tape measure protein TP901%2C core region~SPTR: Phage tail tape measure protein core region%3B~TIGRFAM: Phage tail tape measure protein TP901%2C core region~PFAM: Phage-related minor tail protein~TIGRFAM: phage tail tape measure protein%2C TP901 family%2C core region gene gene3017 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2954 Sgly_2955 Sgly_2955 Sgly_2955 3002222 3002461 + hypothetical protein SPTR: Predicted protein gene gene3018 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2955 Sgly_2956 Sgly_2956 Sgly_2956 3002478 3002666 - hypothetical protein SPTR: Putative uncharacterized protein gene gene3019 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2956 Sgly_2957 Sgly_2957 Sgly_2957 3002684 3003064 - hypothetical protein KEGG: dvm:DvMF_1296 hypothetical protein~SPTR: Predicted protein gene gene3020 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2957 Sgly_2958 Sgly_2958 Sgly_2958 3003099 3003536 - hypothetical protein KEGG: dvu:DVU1110 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3021 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2958 Sgly_2959 Sgly_2959 Sgly_2959 3003556 3004986 - hypothetical protein KEGG: mrb:Mrub_1955 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF2586) gene gene3022 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2959 Sgly_2960 Sgly_2960 Sgly_2960 3004987 3005205 - hypothetical protein KEGG: dvu:DVU1112 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3023 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2960 Sgly_2961 Sgly_2961 Sgly_2961 3005195 3005707 - hypothetical protein KEGG: pmz:HMPREF0659_A7225 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3024 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2961 Sgly_2962 Sgly_2962 Sgly_2962 3005710 3006210 - phage virion morphogenesis protein COGs: COG5005 Mu-like prophage protein gpG~InterPro IPR006522~KEGG: dde:Dde_3379 phage virion morphogenesis (putative tail completion) protein~SPTR: Phage virion morphogeneis protein%3B~TIGRFAM: Phage virion morphogenesis (putative tail completion) protein~PFAM: Phage virion morphogenesis family~TIGRFAM: phage virion morphogenesis (putative tail completion) protein gene gene3025 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2962 Sgly_2963 Sgly_2963 Sgly_2963 3006211 3006660 - protein of unknown function DUF1320 COGs: COG4387 Mu-like prophage protein gp36~InterPro IPR009752~KEGG: sat:SYN_02296 Mu-like prophage FluMu protein GP36~PFAM: Protein of unknown function DUF1320~SPTR: Predicted protein%3B~PFAM: Protein of unknown function (DUF1320) gene gene3026 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2963 Sgly_2964 Sgly_2964 Sgly_2964 3006675 3007562 - major head subunit protein COGs: COG4397 Mu-like prophage major head subunit gpT~KEGG: ecg:E2348C_2664 predicted major head subunit protein~SPTR: Putative uncharacterized protein%3B~PFAM: Mu-like prophage major head subunit gpT gene gene3027 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2964 Sgly_2965 Sgly_2965 Sgly_2965 3007590 3008000 - hypothetical protein KEGG: mag:amb1767 hypothetical protein~SPTR: Hypothetical cytosolic protein gene gene3028 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2965 Sgly_2966 Sgly_2966 Sgly_2966 3008002 3009057 - Mu-like prophage I protein COGs: COG4388 Mu-like prophage I protein~InterPro IPR019295~KEGG: sat:SYN_02300 Mu-like prophage FluMu I protein~PFAM: Mu-like prophage I protein~SPTR: Putative uncharacterized protein%3B~PFAM: Mu-like prophage I protein gene gene3029 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2966 Sgly_2967 Sgly_2967 Sgly_2967 3009195 3009938 - phage head morphogenesis protein%2C SPP1 gp7 family COGs: COG2369 conserved hypothetical protein homolog of phage Mu protein gp30~InterPro IPR006528~KEGG: dvu:DVU1119 virion morphogenesis protein~PFAM: Phage putative head morphogenesis protein%2C SPP1 gp7~SPTR: Phage putative head morphogenesis protein%2C SPP1 gp7 family%3B~TIGRFAM: Phage putative head morphogenesis protein%2C SPP1 gp7~PFAM: Phage Mu protein F like protein~TIGRFAM: phage putative head morphogenesis protein%2C SPP1 gp7 family gene gene3030 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2967 Sgly_2968 Sgly_2968 Sgly_2968 3009931 3011544 - protein of unknown function DUF935 COGs: COG4383 Mu-like prophage protein gp29~InterPro IPR009279~KEGG: sat:SYN_02303 Mu-like prophage FluMu protein GP29~PFAM: Protein of unknown function DUF935~SPTR: Phage head morphogenesis protein%3B~PFAM: Protein of unknown function (DUF935) gene gene3031 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2968 Sgly_2969 Sgly_2969 Sgly_2969 3011559 3013319 - phage uncharacterized protein InterPro IPR006517~KEGG: dae:Dtox_4228 phage uncharacterized protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Phage uncharacterised protein%2C C-terminal~PFAM: Terminase-like family~TIGRFAM: phage uncharacterized protein (putative large terminase)%2C C-terminal domain gene gene3032 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2969 Sgly_2970 Sgly_2970 Sgly_2970 3013312 3013872 - hypothetical protein KEGG: amt:Amet_1950 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF3486) gene gene3033 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2970 Sgly_2971 Sgly_2971 Sgly_2971 3013872 3014186 - hypothetical protein KEGG: amt:Amet_4370 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3034 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2971 Sgly_2972 Sgly_2972 Sgly_2972 3014191 3014487 - hypothetical protein KEGG: amt:Amet_4371 hypothetical protein~SPTR: Predicted protein gene gene3035 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2972 Sgly_2973 Sgly_2973 Sgly_2973 3014500 3014934 - hypothetical protein KEGG: amt:Amet_4372 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3036 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2973 Sgly_2974 Sgly_2974 Sgly_2974 3014990 3015106 + hypothetical protein gene gene3037 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2974 Sgly_2975 Sgly_2975 Sgly_2975 3015055 3015384 - Mor transcription activator domain protein InterPro IPR014875~KEGG: amt:Amet_4373 hypothetical protein~PFAM: Mor transcription activator~SPTR: Mor transcription activator family%3B~PFAM: Mor transcription activator family gene gene3038 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2975 Sgly_2976 Sgly_2976 Sgly_2976 3015403 3016893 - cell wall hydrolase/autolysin COGs: COG0860 N-acetylmuramoyl-L-alanine amidase~InterPro IPR002508~KEGG: cno:NT01CX_2058 hypothetical protein~PFAM: Cell wall hydrolase/autolysin%2C catalytic~SMART: Cell wall hydrolase/autolysin%2C catalytic~SPTR: N-acetylmuramoyl-L-alanine amidase%3B~PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase%3B N-acetylmuramoyl-L-alanine amidase gene gene3039 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2976 Sgly_2977 Sgly_2977 Sgly_2977 3016906 3017292 - hypothetical protein KEGG: bsb:Bresu_2241 ribosomal protein S21~SPTR: Toxin-antitoxin system%2C toxin component%2C RelE family gene gene3040 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2977 Sgly_2978 Sgly_2978 Sgly_2978 3017267 3017737 - hypothetical protein KEGG: amt:Amet_4387 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1018) gene gene3041 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2978 Sgly_2979 Sgly_2979 Sgly_2979 3017749 3018261 - prophage MuMc02%2C host-nuclease inhibitor protein KEGG: mca:MCA2948 prophage MuMc02%2C host-nuclease inhibitor protein~SPTR: Bacteriophage Mu Gam like protein%3B~PFAM: Bacteriophage Mu Gam like protein gene gene3042 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2979 Sgly_2980 Sgly_2980 Sgly_2980 3018261 3018569 - hypothetical protein KEGG: tel:tlr1124 putative branched chain ABC transporter ATP-binding protein~SPTR: GTP-binding protein engA gene gene3043 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2980 Sgly_2981 Sgly_2981 Sgly_2981 3018590 3019582 - transcriptional regulator%2C XRE family COGs: COG2842 Uncharacterized ATPase putative transposase~KEGG: amt:Amet_4393 hypothetical protein~SPTR: Uncharacterized ATPase%2C putative transposase%3B~PFAM: Helix-turn-helix gene gene3044 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2981 Sgly_2982 Sgly_2982 Sgly_2982 3019582 3021666 - Transposase-like Mu InterPro IPR001584: IPR015378~KEGG: amt:Amet_0388 transposase~PFAM: Transposase-like%2C Mu%2C C-terminal%3B Integrase%2C catalytic core~SPTR: Mu transposase%2C C-superfamily%3B~PFAM: Mu transposase%2C C-terminal%3B Bacteriophage Mu transposase gene gene3045 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2982 Sgly_2983 Sgly_2983 Sgly_2983 3021825 3022136 - hypothetical protein KEGG: tva:TVAG_193760 DNA-directed RNA polymerase%2C omega subunit family protein~SPTR: DNA-directed RNA polymerase%2C omega subunit family protein gene gene3046 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2983 Sgly_2984 Sgly_2984 Sgly_2984 3022150 3022368 - helix-turn-helix domain protein InterPro IPR001387~KEGG: cac:CA_C3639 CRO repressor-like DNA-binding protein~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3~SPTR: CRO repressor-like DNA-binding protein%3B~PFAM: Helix-turn-helix gene gene3047 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2984 Sgly_2985 Sgly_2985 Sgly_2985 3022611 3022931 - hypothetical protein KEGG: dae:Dtox_4208 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3048 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2985 Sgly_2986 Sgly_2986 Sgly_2986 3022879 3023121 - hypothetical protein KEGG: bss:BSUW23_09720 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3049 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2986 Sgly_2987 Sgly_2987 Sgly_2987 3023276 3023710 + helix-turn-helix domain protein InterPro IPR001387~KEGG: amt:Amet_4400 XRE family plasmid maintenance system antidote protein~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3~SPTR: Phage transcriptional regulator%3B~PFAM: Helix-turn-helix gene gene3050 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2987 Sgly_2988 Sgly_2988 Sgly_2988 3024587 3024811 + protein of unknown function DUF1659 InterPro IPR012454~KEGG: dhd:Dhaf_3322 protein of unknown function DUF1659~PFAM: Protein of unknown function DUF1659~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1659) gene gene3051 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2988 Sgly_2989 Sgly_2989 Sgly_2989 3024845 3025072 + hypothetical protein KEGG: dhd:Dhaf_3323 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF2922) gene gene3052 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2989 Sgly_2990 Sgly_2990 Sgly_2990 3025179 3026363 - ABC-2 type transporter COGs: COG0842 ABC-type multidrug transport system permease component~InterPro IPR013525~KEGG: tjr:TherJR_0264 ABC-2 type transporter~PFAM: ABC-2 type transporter~SPTR: ABC-2 type transporter%3B~PFAM: ABC-2 type transporter gene gene3053 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2990 Sgly_2991 Sgly_2991 Sgly_2991 3026377 3027396 - secretion protein HlyD family protein COGs: COG1566 Multidrug resistance efflux pump~InterPro IPR006143~KEGG: ttm:Tthe_2580 secretion protein HlyD family protein~PFAM: Secretion protein HlyD~SPTR: Secretion protein%2C HlyD family%3B~PFAM: HlyD family secretion protein gene gene3054 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2991 Sgly_2992 Sgly_2992 Sgly_2992 3027427 3028068 - transcriptional regulator%2C TetR family COGs: COG1309 Transcriptional regulator~InterPro IPR001647~KEGG: drm:Dred_3059 TetR family transcriptional regulator~PFAM: Transcription regulator%2C TetR-like%2C DNA-binding%2C bacterial/archaeal~SPTR: Transcriptional regulator%2C TetR family%3B~PFAM: Bacterial regulatory proteins%2C tetR family gene gene3055 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2992 Sgly_2993 Sgly_2993 Sgly_2993 3028296 3030467 - cell wall binding repeat 2-containing protein COGs: COG2247 Putative cell wall-binding domain~InterPro IPR003961: IPR007253~KEGG: dhd:Dhaf_4482 putative cell wall binding repeat 2-containing protein~PFAM: Putative cell wall binding repeat 2%3B Fibronectin%2C type III~SMART: Fibronectin%2C type III~SPTR: Putative cell wall binding repeat 2-containing protein%3B~PFAM: Putative cell wall binding repeat 2%3B Fibronectin type III domain gene gene3056 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2993 Sgly_2994 Sgly_2994 Sgly_2994 3030708 3031850 - hypothetical protein KEGG: dat:HRM2_33200 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3057 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2994 Sgly_2995 Sgly_2995 Sgly_2995 3031964 3032359 - hypothetical protein KEGG: gyc:GYMC61_3282 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3058 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2995 Sgly_2996 Sgly_2996 Sgly_2996 3032883 3036551 - cell wall binding repeat 2-containing protein InterPro IPR007253~KEGG: dsy:DSY3329 hypothetical protein~PFAM: Putative cell wall binding repeat 2~SPTR: Putative uncharacterized protein%3B~PFAM: Putative cell wall binding repeat 2 gene gene3059 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2996 Sgly_2997 Sgly_2997 Sgly_2997 3037140 3039782 - Subtilisin COGs: COG1404 Subtilisin-like serine protease~InterPro IPR000209: IPR007253~KEGG: tjr:TherJR_2324 peptidase S8 and S53 subtilisin kexin sedolisin~PFAM: Peptidase S8/S53%2C subtilisin/kexin/sedolisin%3B Putative cell wall binding repeat 2~PRIAM: Subtilisin~SPTR: Peptidase S8 and S53 subtilisin kexin sedolisin%3B~PFAM: Putative cell wall binding repeat 2%3B Subtilase family gene gene3060 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2997 Sgly_2998 Sgly_2998 Sgly_2998 3039967 3042030 + glycoside hydrolase family 18 COGs: COG3858 glycosyl hydrolase~InterPro IPR007253: IPR001223: IPR011583~KEGG: dhd:Dhaf_4489 glycoside hydrolase family 18~PFAM: Glycoside hydrolase%2C family 18%2C catalytic domain%3B Putative cell wall binding repeat 2~SMART: Chitinase II~SPTR: Glycoside hydrolase family 18%3B~PFAM: Glycosyl hydrolases family 18%3B Putative cell wall binding repeat 2 gene gene3061 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2998 Sgly_2999 Sgly_2999 Sgly_2999 3042141 3042767 - Undecaprenyl-phosphate galactose phosphotransferase COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis~InterPro IPR003362~KEGG: dhd:Dhaf_4500 undecaprenyl-phosphate galactose phosphotransferase~PFAM: Bacterial sugar transferase~PRIAM: Undecaprenyl-phosphate galactose phosphotransferase~SPTR: Undecaprenyl-phosphate galactose phosphotransferase%3B~PFAM: Bacterial sugar transferase gene gene3062 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_2999 Sgly_3000 Sgly_3000 Sgly_3000 3042781 3043950 - Glutamine--scyllo-inositol transaminase COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis~InterPro IPR000653~KEGG: mpd:MCP_0774 putative aminotransferase~PFAM: DegT/DnrJ/EryC1/StrS aminotransferase~PRIAM: Glutamine--scyllo-inositol transaminase~SPTR: Putative aminotransferase%3B~PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family gene gene3063 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3000 Sgly_3001 Sgly_3001 Sgly_3001 3043983 3045221 - glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: dhd:Dhaf_4499 glycosyl transferase group 1~PFAM: Glycosyl transferase%2C group 1~SPTR: Glycosyl transferase group 1%3B~PFAM: Glycosyl transferases group 1 gene gene3064 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3001 Sgly_3002 Sgly_3002 Sgly_3002 3045242 3046570 - O-antigen polymerase InterPro IPR007016~KEGG: dhd:Dhaf_4498 O-antigen polymerase~PFAM: O-antigen ligase-related~SPTR: O-antigen polymerase%3B~PFAM: O-Antigen ligase gene gene3065 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3002 Sgly_3003 Sgly_3003 Sgly_3003 3046594 3048015 - polysaccharide biosynthesis protein COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid~InterPro IPR002797~KEGG: dsy:DSY3339 hypothetical protein~PFAM: Polysaccharide biosynthesis protein~SPTR: Putative uncharacterized protein%3B~PFAM: Polysaccharide biosynthesis protein gene gene3066 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3003 Sgly_3004 Sgly_3004 Sgly_3004 3048038 3049276 - glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: dhd:Dhaf_4495 glycosyl transferase group 1~PFAM: Glycosyl transferase%2C group 1~SPTR: Glycosyl transferase group 1%3B~PFAM: Glycosyl transferases group 1 gene gene3067 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3004 Sgly_3005 Sgly_3005 Sgly_3005 3049284 3050456 - glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: saf:SULAZ_0352 glycosyltransferase~PFAM: Glycosyl transferase%2C group 1~SPTR: Glycosyltransferase%3B~PFAM: Glycosyl transferases group 1 gene gene3068 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3005 Sgly_3006 Sgly_3006 Sgly_3006 3050453 3051811 - hypothetical protein KEGG: dhd:Dhaf_4494 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3069 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3006 Sgly_3007 Sgly_3007 Sgly_3007 3051859 3052971 - Glutamine--scyllo-inositol transaminase COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis~InterPro IPR000653~KEGG: dhd:Dhaf_4493 glutamine--scyllo-inositol transaminase~PFAM: DegT/DnrJ/EryC1/StrS aminotransferase~PRIAM: Glutamine--scyllo-inositol transaminase~SPTR: Putative uncharacterized protein%3B~PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family gene gene3070 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3007 Sgly_3008 Sgly_3008 Sgly_3008 3053052 3053918 - transferase hexapeptide repeat containing protein COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl)~InterPro IPR001451~KEGG: dhd:Dhaf_4502 UDP-3-O-(3-hydroxymyristoyl)-like protein~PFAM: Bacterial transferase hexapeptide repeat~SPTR: UDP-3-O-(3-hydroxymyristoyl)-like protein%3B~PFAM: Bacterial transferase hexapeptide (three repeats) gene gene3071 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3008 Sgly_3009 Sgly_3009 Sgly_3009 3054159 3055208 - oxidoreductase domain protein COGs: COG0673 dehydrogenase and related protein~InterPro IPR000683: IPR004104~KEGG: dsy:DSY3345 hypothetical protein~PFAM: Oxidoreductase%2C N-terminal%3B Oxidoreductase%2C C-terminal~SPTR: Putative uncharacterized protein%3B~PFAM: Oxidoreductase family%2C NAD-binding Rossmann fold%3B Oxidoreductase family%2C C-terminal alpha/beta domain gene gene3072 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3009 Sgly_3010 Sgly_3010 Sgly_3010 3055224 3056579 - nucleotide sugar dehydrogenase COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase~InterPro IPR001732: IPR014026: IPR014027: IPR017476~KEGG: dhd:Dhaf_4504 nucleotide sugar dehydrogenase~PFAM: UDP-glucose/GDP-mannose dehydrogenase%2C N-terminal%3B UDP-glucose/GDP-mannose dehydrogenase%2C dimerisation%3B UDP-glucose/GDP-mannose dehydrogenase%2C C-terminal~PRIAM: UDP-glucose 6-dehydrogenase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Nucleotide sugar dehydrogenase~PFAM: UDP-glucose/GDP-mannose dehydrogenase family%2C NAD binding domain%3B UDP-glucose/GDP-mannose dehydrogenase family%2C central domain%3B UDP-glucose/GDP-mannose dehydrogenase family%2C UDP binding domain~TIGRFAM: nucleotide sugar dehydrogenase gene gene3073 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3010 Sgly_3011 Sgly_3011 Sgly_3011 3056631 3058469 - polysaccharide biosynthesis protein CapD COGs: COG1086 nucleoside-diphosphate sugar epimerase~InterPro IPR003781: IPR003869~KEGG: dsy:DSY3347 hypothetical protein~PFAM: Polysaccharide biosynthesis protein CapD-like%3B CoA-binding~SPTR: Putative uncharacterized protein%3B~PFAM: Polysaccharide biosynthesis protein gene gene3074 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3011 Sgly_3012 Sgly_3012 Sgly_3012 3058688 3060301 - Lytic transglycosylase catalytic COGs: COG2247 Putative cell wall-binding domain~InterPro IPR008258: IPR007253~KEGG: dsy:DSY3348 hypothetical protein~PFAM: Lytic transglycosylase-like%2C catalytic%3B Putative cell wall binding repeat 2~SPTR: Putative uncharacterized protein%3B~PFAM: Transglycosylase SLT domain%3B Putative cell wall binding repeat 2 gene gene3075 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3012 Sgly_3013 Sgly_3013 Sgly_3013 3060534 3062171 - cell wall binding repeat 2-containing protein COGs: COG2247 Putative cell wall-binding domain~InterPro IPR008258: IPR007253~KEGG: dsy:DSY3348 hypothetical protein~PFAM: Putative cell wall binding repeat 2%3B Lytic transglycosylase-like%2C catalytic~SPTR: Putative uncharacterized protein%3B~PFAM: Transglycosylase SLT domain%3B Putative cell wall binding repeat 2 gene gene3076 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3013 Sgly_3014 Sgly_3014 Sgly_3014 3062321 3063004 - hypothetical protein KEGG: dhd:Dhaf_4508 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3077 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3014 Sgly_3015 Sgly_3015 Sgly_3015 3063281 3063946 - protein of unknown function DUF1648 COGs: COG5658 integral membrane protein~InterPro IPR012867~KEGG: dhd:Dhaf_4509 protein of unknown function DUF1648~PFAM: Protein of unknown function DUF1648~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1648) gene gene3078 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3015 Sgly_3016 Sgly_3016 Sgly_3016 3063956 3064237 - transcriptional regulator%2C ArsR family COGs: COG0640 transcriptional regulator protein~InterPro IPR001845~KEGG: cbt:CLH_1991 transcriptional regulator ArsR family~PFAM: HTH transcriptional regulator%2C ArsR~SMART: HTH transcriptional regulator%2C ArsR~SPTR: Transcriptional regulator ArsR family%3B~PFAM: Bacterial regulatory protein%2C arsR family gene gene3079 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3016 Sgly_3017 Sgly_3017 Sgly_3017 3065421 3067397 - metallophosphoesterase InterPro IPR004843~KEGG: sun:SUN_0863 hypothetical protein~PFAM: Metallophosphoesterase~SPTR: Metallophosphoesterase%3B~PFAM: Calcineurin-like phosphoesterase gene gene3080 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3017 Sgly_3018 Sgly_3018 Sgly_3018 3067562 3068827 - ATP-binding region ATPase domain protein InterPro IPR003594~KEGG: dhd:Dhaf_2424 signal transduction histidine kinase regulating citrate/malate metabolism~PFAM: ATPase-like%2C ATP-binding domain~SPTR: Putative uncharacterized protein gene gene3081 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3018 Sgly_3019 Sgly_3019 Sgly_3019 3068827 3069561 - response regulator receiver protein COGs: COG3279 Response regulator of the LytR/AlgR family~InterPro IPR001789~KEGG: dsy:DSY1957 hypothetical protein~PFAM: Signal transduction response regulator%2C receiver domain~SMART: Signal transduction response regulator%2C receiver domain~SPTR: Two component transcriptional regulator%2C LytTR family%3B~PFAM: Response regulator receiver domain gene gene3082 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3019 Sgly_3020 Sgly_3020 Sgly_3020 3069773 3070507 - hypothetical protein KEGG: dhd:Dhaf_4512 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3083 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3020 Sgly_3021 Sgly_3021 Sgly_3021 3070702 3071607 - UDP-glucose pyrophosphorylase COGs: COG1210 UDP-glucose pyrophosphorylase~InterPro IPR005835: IPR005771~KEGG: dhd:Dhaf_4514 UTP-glucose-1-phosphate uridylyltransferase~PFAM: Nucleotidyl transferase~PRIAM: UTP--glucose-1-phosphate uridylyltransferase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: UTP--glucose-1-phosphate uridylyltransferase%2C bacterial/archaeal type~PFAM: Nucleotidyl transferase~TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase gene gene3084 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3021 Sgly_3022 Sgly_3022 Sgly_3022 3071858 3072466 - ATP-dependent Clp protease proteolytic subunit ClpP COGs: COG0740 Protease subunit of ATP-dependent Clp protease~HAMAP: ATP-dependent Clp protease proteolytic subunit~InterPro IPR001907~KEGG: dhd:Dhaf_4515 ATP-dependent Clp protease%2C proteolytic subunit ClpP~PFAM: Peptidase S14%2C ClpP~PRIAM: Endopeptidase Clp~SPTR: ATP-dependent Clp protease proteolytic subunit%3B~TIGRFAM: Peptidase S14%2C ClpP~PFAM: Clp protease~TIGRFAM: ATP-dependent Clp protease%2C proteolytic subunit ClpP gene gene3085 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3022 Sgly_3023 Sgly_3023 Sgly_3023 3072670 3072831 + hypothetical protein gene gene3086 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3023 Sgly_3024 Sgly_3024 Sgly_3024 3073188 3074876 + L-lactate transport COGs: COG1620 L-lactate permease~InterPro IPR003804~KEGG: bgf:BC1003_2066 L-lactate transport~PFAM: L-lactate permease~SPTR: L-lactate transport%3B~TIGRFAM: L-lactate permease~PFAM: L-lactate permease~TIGRFAM: L-lactate transport gene gene3087 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3024 Sgly_3025 Sgly_3025 Sgly_3025 3075379 3077061 + L-lactate transport COGs: COG1620 L-lactate permease~InterPro IPR003804~KEGG: bgf:BC1003_2066 L-lactate transport~PFAM: L-lactate permease~SPTR: L-lactate transport%3B~TIGRFAM: L-lactate permease~PFAM: L-lactate permease~TIGRFAM: L-lactate transport gene gene3088 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3025 Sgly_3026 Sgly_3026 Sgly_3026 3077244 3077990 + hypothetical protein KEGG: mpd:MCP_1484 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3089 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3026 Sgly_3027 Sgly_3027 Sgly_3027 3078306 3079259 - acetyl-CoA carboxylase carboxyltransferase subunit alpha COGs: COG0825 Acetyl-CoA carboxylase alpha subunit~HAMAP: Acetyl-CoA carboxylase%2C alpha subunit~InterPro IPR020582: IPR001095~KEGG: cno:NT01CX_0931 acetyl-CoA carboxylase%2C carboxyl transferase%2C alpha subunit~PFAM: Acetyl-CoA carboxylase%2C alpha subunit%2C conserved region~PRIAM: Acetyl-CoA carboxylase~SPTR: Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha%3B~TIGRFAM: Acetyl-CoA carboxylase%2C alpha subunit~PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit~TIGRFAM: acetyl-CoA carboxylase%2C carboxyl transferase%2C alpha subunit gene gene3090 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3027 Sgly_3028 Sgly_3028 Sgly_3028 3079281 3080153 - Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta COGs: COG0777 Acetyl-CoA carboxylase beta subunit~HAMAP: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta~InterPro IPR000022: IPR000438~KEGG: cno:NT01CX_0930 acetyl-CoA carboxylase%2C carboxyl transferase%2C beta subunit~PFAM: Carboxyl transferase~PRIAM: Acetyl-CoA carboxylase~SPTR: Acetyl-CoA carboxylase%2C carboxyl transferase%2C beta subunit%3B~TIGRFAM: Acetyl-CoA carboxylase carboxyl transferase%2C beta subunit~PFAM: Carboxyl transferase domain~TIGRFAM: acetyl-CoA carboxylase%2C carboxyl transferase%2C beta subunit gene gene3091 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3028 Sgly_3029 Sgly_3029 Sgly_3029 3080195 3081538 - acetyl-CoA carboxylase%2C biotin carboxylase COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit~InterPro IPR005481: IPR005479: IPR005482: IPR004549~KEGG: cac:CA_C3570 biotin carboxylase~PFAM: Carbamoyl phosphate synthetase%2C large subunit%2C ATP-binding%3B Carbamoyl phosphate synthase%2C large subunit%2C N-terminal%3B Biotin carboxylase%2C C-terminal~PRIAM: Pyruvate carboxylase~SPTR: Biotin carboxylase%3B~TIGRFAM: Acetyl-CoA carboxylase%2C biotin carboxylase~PFAM: Carbamoyl-phosphate synthase L chain%2C ATP binding domain%3B Biotin carboxylase C-terminal domain%3B Carbamoyl-phosphate synthase L chain%2C N-terminal domain~TIGRFAM: acetyl-CoA carboxylase%2C biotin carboxylase subunit gene gene3092 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3029 Sgly_3030 Sgly_3030 Sgly_3030 3081609 3082034 - (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase COGs: COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase~HAMAP: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ~InterPro IPR013114: IPR010084~KEGG: cno:NT01CX_0928 (3R)-hydroxymyristoyl-ACP dehydratase~PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase%2C FabA/FabZ~SPTR: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase%3B~TIGRFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ~PFAM: FabA-like domain~TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ gene gene3093 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3030 Sgly_3031 Sgly_3031 Sgly_3031 3082058 3082519 - acetyl-CoA carboxylase%2C biotin carboxyl carrier protein COGs: COG0511 Biotin carboxyl carrier protein~InterPro IPR000089: IPR001249~KEGG: lmh:LMHCC_1215 acetyl-CoA carboxylase%2C biotin carboxyl carrier protein~PFAM: Biotin/lipoyl attachment~SPTR: Acetyl-CoA carboxylase%2C biotin carboxyl carrier protein%3B~TIGRFAM: Acetyl-CoA biotin carboxyl carrier~PFAM: Biotin-requiring enzyme~TIGRFAM: acetyl-CoA carboxylase%2C biotin carboxyl carrier protein gene gene3094 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3031 Sgly_3032 Sgly_3032 Sgly_3032 3082520 3083764 - 3-oxoacyl-(acyl-carrier-protein) synthase II COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase~InterPro IPR014030: IPR014031: IPR017568~KEGG: cno:NT01CX_0926 3-oxoacyl-(acyl carrier protein) synthase II~PFAM: Beta-ketoacyl synthase%2C N-terminal%3B Beta-ketoacyl synthase%2C C-terminal~PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase II~SPTR: 3-oxoacyl-[acyl-carrier-protein] synthase 2%3B~TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2~PFAM: Beta-ketoacyl synthase%2C N-terminal domain%3B Beta-ketoacyl synthase%2C C-terminal domain~TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II gene gene3095 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3032 Sgly_3033 Sgly_3033 Sgly_3033 3083777 3084517 - 3-oxoacyl-(acyl-carrier-protein) reductase COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)~InterPro IPR002198: IPR011284~KEGG: cbt:CLH_1084 3-ketoacyl-(acyl-carrier-protein) reductase~PFAM: Short-chain dehydrogenase/reductase SDR~PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase~SPTR: 3-oxoacyl-[acyl-carrier-protein] reductase%3B~TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase~PFAM: short chain dehydrogenase~TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase gene gene3096 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3033 Sgly_3034 Sgly_3034 Sgly_3034 3084549 3085490 - (Acyl-carrier-protein) S-malonyltransferase COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase~InterPro IPR014043: IPR004410~KEGG: cno:NT01CX_0924 malonyl CoA-acyl carrier protein transacylase~PFAM: Acyl transferase~PRIAM: [Acyl-carrier-protein] S-malonyltransferase~SPTR: Malonyl CoA-acyl carrier protein transacylase%3B~TIGRFAM: Malonyl CoA-acyl carrier protein transacylase~PFAM: Acyl transferase domain~TIGRFAM: malonyl CoA-acyl carrier protein transacylase gene gene3097 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3034 Sgly_3035 Sgly_3035 Sgly_3035 3085493 3086440 - enoyl-(acyl-carrier-protein) reductase II COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase~InterPro IPR004136: IPR017569~KEGG: cac:CA_C3576 2-nitropropane dioxygenase-like protein~PFAM: 2-nitropropane dioxygenase%2C NPD~SPTR: Dioxygenase related to 2-nitropropane dioxygenase%3B~TIGRFAM: Enoyl-(acyl-carrier-protein) reductase II%2C putative~PFAM: 2-nitropropane dioxygenase~TIGRFAM: putative enoyl-(acyl-carrier-protein) reductase II gene gene3098 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3035 Sgly_3036 Sgly_3036 Sgly_3036 3086440 3086682 - Acyl carrier protein HAMAP: Acyl carrier protein (ACP)~InterPro IPR006163: IPR003231~KEGG: csc:Csac_1606 acyl carrier protein~PFAM: Phosphopantetheine-binding~SPTR: Acyl carrier protein%3B~TIGRFAM: Acyl carrier protein (ACP)~PFAM: Phosphopantetheine attachment site~TIGRFAM: acyl carrier protein gene gene3099 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3036 Sgly_3037 Sgly_3037 Sgly_3037 3086716 3087693 - 3-oxoacyl-(acyl-carrier-protein) synthase III COGs: COG0332 3-oxoacyl-(acyl-carrier-protein)~HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH)~InterPro IPR013751: IPR013747: IPR004655~KEGG: cno:NT01CX_0921 3-oxoacyl-(acyl carrier protein) synthase III~PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III%3B 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal~PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase I~SPTR: 3-oxoacyl-[acyl-carrier-protein] synthase 3%3B~TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH)~PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal%3B 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III~TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III gene gene3100 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3037 Sgly_3038 Sgly_3038 Sgly_3038 3087731 3088174 - transcriptional regulator%2C MarR family COGs: COG1846 Transcriptional regulators~InterPro IPR000835~KEGG: cno:NT01CX_0920 MarR family transcriptional regulator~PFAM: HTH transcriptional regulator%2C MarR~SMART: HTH transcriptional regulator%2C MarR~SPTR: Transcriptional regulator%2C MarR family%3B~PFAM: MarR family gene gene3101 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3038 Sgly_3039 Sgly_3039 Sgly_3039 3088538 3090520 + hypothetical protein COGs: COG0531 Amino acid transporter~KEGG: chy:CHY_0618 hypothetical protein~SPTR: Putative membrane protein gene gene3102 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3039 Sgly_3040 Sgly_3040 Sgly_3040 3090554 3091138 - hypothetical protein KEGG: gym:GYMC10_5435 ion transport 2 domain protein~SPTR: Ion transport 2 domain protein gene gene3103 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3040 Sgly_3041 Sgly_3041 Sgly_3041 3091281 3092891 + L-lactate permease%2C putative COGs: COG1620 L-lactate permease~KEGG: gsu:GSU0226 L-lactate permease%2C putative~SPTR: L-lactate permease%3B~PFAM: L-lactate permease gene gene3104 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3041 Sgly_3042 Sgly_3042 Sgly_3042 3092888 3093517 - cyclase family protein COGs: COG1878 metal-dependent hydrolase~InterPro IPR007325~KEGG: cpc:Cpar_2028 cyclase family protein~PFAM: Putative cyclase~SPTR: Cyclase family protein%3B~PFAM: Putative cyclase gene gene3105 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3042 Sgly_3043 Sgly_3043 Sgly_3043 3093651 3094187 - Rubrerythrin COGs: COG1592 Rubrerythrin~InterPro IPR003251: IPR004039~KEGG: csc:Csac_2430 rubrerythrin~PFAM: Rubrerythrin%3B Rubredoxin-type Fe(Cys)4 protein~SPTR: Rubrerythrin%3B~PFAM: Rubrerythrin gene gene3106 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3043 Sgly_3044 Sgly_3044 Sgly_3044 3094221 3094604 - desulfoferrodoxin COGs: COG2033 Desulfoferrodoxin~InterPro IPR004462: IPR002742: IPR004793~KEGG: hor:Hore_05310 desulfoferrodoxin~PFAM: Desulfoferrodoxin%2C ferrous iron-binding domain%3B Desulfoferrodoxin Dfx~SPTR: Desulfoferrodoxin%3B~TIGRFAM: Desulfoferrodoxin%3B Desulfoferrodoxin Dfx%3B Desulfoferrodoxin%2C ferrous iron-binding domain~PFAM: Desulfoferrodoxin%3B Desulfoferrodoxin%2C N-terminal domain~TIGRFAM: desulfoferrodoxin FeS4 iron-binding domain%3B desulfoferrodoxin%3B desulfoferrodoxin ferrous iron-binding domain gene gene3107 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3044 Sgly_3045 Sgly_3045 Sgly_3045 3094579 3095763 - flavodoxin/nitric oxide synthase COGs: COG0426 flavoprotein~InterPro IPR008254~KEGG: hmo:HM1_0548 rubredoxin-oxygen oxidoreductase%2C putative~PFAM: Flavodoxin/nitric oxide synthase~SPTR: Rubredoxin-oxygen oxidoreductase%2C putative%3B~PFAM: Metallo-beta-lactamase superfamily%3B Flavodoxin gene gene3108 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3045 Sgly_3046 Sgly_3046 Sgly_3046 3095781 3096515 - flavin reductase domain protein FMN-binding protein COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family~InterPro IPR002563: IPR004039~KEGG: ckr:CKR_2483 hypothetical protein~PFAM: Flavin reductase-like%2C FMN-binding%3B Rubredoxin-type Fe(Cys)4 protein~SPTR: Rubredoxin%3B~manually curated~PFAM: Rubredoxin%3B Flavin reductase like domain gene gene3109 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3046 Sgly_3047 Sgly_3047 Sgly_3047 3096687 3096956 - hypothetical protein KEGG: fno:Fnod_0241 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3110 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3047 Sgly_3048 Sgly_3048 Sgly_3048 3097095 3097415 - alkylhydroperoxidase like protein%2C AhpD family InterPro IPR003779: IPR004675~KEGG: toc:Toce_1666 carboxymuconolactone decarboxylase~PFAM: Carboxymuconolactone decarboxylase~SPTR: Carboxymuconolactone decarboxylase%3B~TIGRFAM: Alkylhydroperoxidase AhpD core~PFAM: Carboxymuconolactone decarboxylase family~TIGRFAM: alkylhydroperoxidase AhpD family core domain gene gene3111 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3048 Sgly_3049 Sgly_3049 Sgly_3049 3097700 3099256 + DEAD/DEAH box helicase domain protein COGs: COG0513 Superfamily II DNA and RNA helicase~InterPro IPR011545: IPR001650: IPR014001~KEGG: drm:Dred_2292 DEAD/DEAH box helicase domain-containing protein~PFAM: DNA/RNA helicase%2C DEAD/DEAH box type%2C N-terminal%3B DNA/RNA helicase%2C C-terminal~SMART: DEAD-like helicase%2C N-terminal%3B DNA/RNA helicase%2C C-terminal~SPTR: DEAD/DEAH box helicase domain protein%3B~PFAM: Helicase conserved C-terminal domain%3B DEAD/DEAH box helicase gene gene3112 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3049 Sgly_3050 Sgly_3050 Sgly_3050 3099383 3100258 - transcriptional regulator%2C LysR family COGs: COG0583 Transcriptional regulator~InterPro IPR000847: IPR005119~KEGG: gym:GYMC10_1345 transcriptional regulator%2C LysR family~PFAM: LysR%2C substrate-binding%3B HTH transcriptional regulator%2C LysR~SPTR: LysR substrate-binding%3B~PFAM: Bacterial regulatory helix-turn-helix protein%2C lysR family%3B LysR substrate binding domain gene gene3113 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3050 Sgly_3051 Sgly_3051 Sgly_3051 3100390 3101592 + major facilitator superfamily MFS_1 COGs: COG2807 Cyanate permease~InterPro IPR011701~KEGG: bld:BLi04347 YycB~PFAM: Major facilitator superfamily MFS-1~SPTR: Cyanate transport system protein%3B~PFAM: Major Facilitator Superfamily~TIGRFAM: cyanate transporter gene gene3114 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3051 Sgly_3052 Sgly_3052 Sgly_3052 3101624 3102058 + UspA domain-containing protein COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein~InterPro IPR006016~KEGG: tpe:Tpen_1466 UspA domain-containing protein~PFAM: UspA~SPTR: UspA domain protein%3B~PFAM: Universal stress protein family gene gene3115 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3052 Sgly_3053 Sgly_3053 Sgly_3053 3102067 3102309 + pseudogene gene3116 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3053 Sgly_3054 Sgly_3054 Sgly_3054 3102464 3102697 + hypothetical protein SPTR: Putative uncharacterized protein gene gene3117 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3054 Sgly_3055 Sgly_3055 Sgly_3055 3102694 3108249 + S-layer domain-containing protein COGs: COG5263 FOG: Glucan-binding domain (YG repeat)~InterPro IPR001119: IPR002479~KEGG: dhd:Dhaf_2434 cell wall/surface repeat protein~PFAM: S-layer homology domain%3B Putative cell wall binding repeat~SPTR: Peptidoglycan-binding lysin domain protein%3B~PFAM: Putative cell wall binding repeat%3B S-layer homology domain gene gene3118 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3055 Sgly_3056 Sgly_3056 Sgly_3056 3108475 3110457 - Xenobiotic-transporting ATPase COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterPro IPR001140: IPR003439: IPR003593~KEGG: cbe:Cbei_2094 ABC transporter%2C transmembrane region~PFAM: ABC transporter%2C transmembrane domain%3B ABC transporter-like~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter%2C transmembrane region%3B~PFAM: ABC transporter transmembrane region%3B ABC transporter gene gene3119 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3056 Sgly_3057 Sgly_3057 Sgly_3057 3110454 3112181 - Xenobiotic-transporting ATPase COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterPro IPR001140: IPR003439: IPR003593~KEGG: gym:GYMC10_5997 ABC transporter related protein~PFAM: ABC transporter-like%3B ABC transporter%2C transmembrane domain~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter%3B~PFAM: ABC transporter transmembrane region%3B ABC transporter gene gene3120 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3057 Sgly_3058 Sgly_3058 Sgly_3058 3112222 3112677 - regulatory protein MarR InterPro IPR000835~KEGG: cbe:Cbei_2092 transcriptional regulator%2C TrmB~PFAM: HTH transcriptional regulator%2C MarR~SMART: HTH transcriptional regulator%2C MarR~SPTR: Transcriptional regulator%2C TrmB%3B~PFAM: MarR family gene gene3121 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3058 Sgly_3059 Sgly_3059 Sgly_3059 3112949 3113353 - Uncharacterized protein family UPF0150 InterPro IPR005357~KEGG: drm:Dred_1551 hypothetical protein~PFAM: Uncharacterised protein family UPF0150~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterised protein family (UPF0150) gene gene3122 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3059 Sgly_3060 Sgly_3060 Sgly_3060 3113398 3113580 - YcfA family protein InterPro IPR012933~KEGG: clj:CLJU_c31450 hypothetical protein~PFAM: YcfA-like~SPTR: Phage protein%3B~PFAM: YcfA-like protein gene gene3123 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3060 Sgly_3061 Sgly_3061 Sgly_3061 3113739 3114434 - LrgB family protein COGs: COG1346 Putative effector of murein hydrolase~InterPro IPR007300~KEGG: bpu:BPUM_3487 murein hydrolase LrgB~PFAM: LrgB-like protein~SPTR: Membrane protein%2C putative%3B~PFAM: LrgB-like family~TIGRFAM: conserved hypothetical protein TIGR00659 gene gene3124 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3061 Sgly_3062 Sgly_3062 Sgly_3062 3114434 3114871 - LrgA family protein COGs: COG1380 Putative effector of murein hydrolase LrgA~InterPro IPR005538~KEGG: bsu:BSU38320 holin-like protein~PFAM: LrgA~SPTR: Holin-like protein%3B~PFAM: LrgA family gene gene3125 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3062 Sgly_3063 Sgly_3063 Sgly_3063 3115294 3115866 - flavin reductase domain protein FMN-binding protein COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family~InterPro IPR002563~KEGG: dba:Dbac_3486 flavin reductase domain protein FMN-binding~PFAM: Flavin reductase-like%2C FMN-binding~SPTR: Flavin reductase domain protein FMN-binding%3B~PFAM: Flavin reductase like domain gene gene3126 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3063 Sgly_3064 Sgly_3064 Sgly_3064 3115943 3117019 - iron-only hydrogenase maturation protein HydE COGs: COG0502 Biotin synthase~InterPro IPR007197: IPR006638~KEGG: cbl:CLK_3055 biotin synthase~PFAM: Radical SAM~SMART: Elongator protein 3/MiaB/NifB~SPTR: Radical SAM domain-containing protein%3B~PFAM: Radical SAM superfamily gene gene3127 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3064 Sgly_3065 Sgly_3065 Sgly_3065 3117038 3117955 - homoserine O-succinyltransferase COGs: COG1897 Homoserine trans-succinylase~HAMAP: Homoserine O-succinyltransferase~InterPro IPR005697~KEGG: cth:Cthe_1845 homoserine O-succinyltransferase~PFAM: Homoserine O-succinyltransferase~PRIAM: Homoserine O-succinyltransferase~SPTR: Homoserine O-succinyltransferase%3B~TIGRFAM: Homoserine O-succinyltransferase~PFAM: Homoserine O-succinyltransferase~TIGRFAM: homoserine O-succinyltransferase gene gene3128 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3065 Sgly_3066 Sgly_3066 Sgly_3066 3118068 3119069 + hypothetical protein KEGG: bts:Btus_2590 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3129 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3066 Sgly_3067 Sgly_3067 Sgly_3067 3119285 3119836 - phenylacetic acid degradation-related protein InterPro IPR006683: IPR003736~KEGG: cdl:CDR20291_0846 putative thioesterase~PFAM: Thioesterase superfamily~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Phenylacetic acid degradation-related protein~PFAM: Thioesterase superfamily~TIGRFAM: uncharacterized domain 1 gene gene3131 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3067 Sgly_3068 Sgly_3068 Sgly_3068 3120093 3121061 + hypothetical protein COGs: COG4632 Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase~KEGG: ttm:Tthe_2499 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Predicted periplasmic protein (DUF2233) gene gene3132 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3068 Sgly_3069 Sgly_3069 Sgly_3069 3121071 3122054 + hypothetical protein KEGG: ttm:Tthe_2498 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3133 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3069 Sgly_3070 Sgly_3070 Sgly_3070 3122276 3124543 + UvrD/REP helicase COGs: COG3973 Superfamily I DNA and RNA helicase~InterPro IPR000212~KEGG: dhd:Dhaf_2268 ATP-dependent DNA helicase replicase~PFAM: DNA helicase%2C UvrD/REP type~SPTR: Putative uncharacterized protein%3B~PFAM: UvrD/REP helicase gene gene3134 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3070 Sgly_3071 Sgly_3071 Sgly_3071 3124593 3125273 + Peptidoglycan-binding lysin domain protein InterPro IPR018392: IPR002482~KEGG: slp:Slip_1660 Mn-containing catalase~PFAM: Peptidoglycan-binding lysin domain~SMART: Peptidoglycan-binding Lysin subgroup~SPTR: Mn-containing catalase%3B~PFAM: Ferritin-like domain%3B LysM domain gene gene3135 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3071 Sgly_3072 Sgly_3072 Sgly_3072 3125249 3125494 - Excinuclease ABC C subunit domain protein COGs: COG2827 endonuclease containing a URI domain~InterPro IPR000305~KEGG: cbl:CLK_2762 GIY-YIG domain-containing protein~PFAM: Excinuclease ABC%2C C subunit%2C N-terminal~SMART: Excinuclease ABC%2C C subunit%2C N-terminal~SPTR: GIY-YIG domain protein%3B~PFAM: GIY-YIG catalytic domain gene gene3136 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3072 Sgly_3073 Sgly_3073 Sgly_3073 3125524 3126726 - diguanylate cyclase COGs: COG2199 FOG: GGDEF domain~InterPro IPR000160~KEGG: slp:Slip_0516 diguanylate cyclase~PFAM: Diguanylate cyclase%2C predicted~SMART: Diguanylate cyclase%2C predicted~SPTR: Diguanylate cyclase%3B~TIGRFAM: Diguanylate cyclase%2C predicted~PFAM: GGDEF domain~TIGRFAM: diguanylate cyclase (GGDEF) domain gene gene3137 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3073 Sgly_3074 Sgly_3074 Sgly_3074 3126714 3127148 - MOSC domain containing protein COGs: COG2258 conserved hypothetical protein~InterPro IPR005302~KEGG: cbe:Cbei_1991 MOSC domain-containing protein~PFAM: Molybdenum cofactor sulfurase%2C C-terminal~SPTR: MOSC domain containing protein%3B~PFAM: MOSC domain gene gene3138 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3074 Sgly_3075 Sgly_3075 Sgly_3075 3127162 3127659 - molybdopterin-guanine dinucleotide biosynthesis protein B COGs: COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein~InterPro IPR004435~KEGG: dae:Dtox_3499 molybdopterin-guanine dinucleotide biosynthesis protein B~SPTR: Molybdopterin-guanine dinucleotide biosynthesis protein B%3B~TIGRFAM: Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB)%2C conserved domain~PFAM: Molybdopterin guanine dinucleotide synthesis protein B~TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein MobB gene gene3139 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3075 Sgly_3076 Sgly_3076 Sgly_3076 3127688 3128188 - molybdopterin adenylyltransferase COGs: COG0521 Molybdopterin biosynthesis protein~InterPro IPR001453: IPR020817~KEGG: hmo:HM1_0061 molybdenum cofactor biosynthesis protein%2C putative~PFAM: Molybdopterin binding~SPTR: Molybdenum cofactor biosynthesis protein%2C putative%3B~TIGRFAM: Molybdenum cofactor synthesis~PFAM: Probable molybdopterin binding domain~TIGRFAM: molybdenum cofactor synthesis domain gene gene3140 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3076 Sgly_3077 Sgly_3077 Sgly_3077 3128207 3128683 - GTP cyclohydrolase subunit MoaC COGs: COG0315 Molybdenum cofactor biosynthesis enzyme~InterPro IPR002820~KEGG: tjr:TherJR_0760 molybdenum cofactor biosynthesis protein C~PFAM: Molybdopterin cofactor biosynthesis C (MoaC) domain~SPTR: Molybdenum cofactor biosynthesis protein C%3B~TIGRFAM: Molybdopterin cofactor biosynthesis C (MoaC) domain~PFAM: MoaC family~TIGRFAM: molybdenum cofactor biosynthesis protein MoaC gene gene3141 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3077 Sgly_3078 Sgly_3078 Sgly_3078 3128690 3129646 - GTP cyclohydrolase subunit MoaA COGs: COG2896 Molybdenum cofactor biosynthesis protein~InterPro IPR007197: IPR010505: IPR006638: IPR013483~KEGG: dhd:Dhaf_1930 molybdenum cofactor biosynthesis protein A~PFAM: Radical SAM%3B Molybdenum cofactor synthesis C-terminal~SMART: Elongator protein 3/MiaB/NifB~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Molybdenum cofactor biosynthesis protein A~PFAM: Molybdenum Cofactor Synthesis C%3B Radical SAM superfamily~TIGRFAM: molybdenum cofactor biosynthesis protein A%2C bacterial gene gene3142 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3078 Sgly_3079 Sgly_3079 Sgly_3079 3129681 3130706 - molybdopterin binding domain protein COGs: COG0303 Molybdopterin biosynthesis enzyme~InterPro IPR001453~KEGG: cbl:CLK_0402 putative molybdopterin binding protein~PFAM: Molybdopterin binding~SPTR: Molybdopterin binding domain protein%3B~PFAM: Probable molybdopterin binding domain~TIGRFAM: molybdenum cofactor synthesis domain gene gene3143 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3079 Sgly_3080 Sgly_3080 Sgly_3080 3130776 3132116 - molybdenum cofactor synthesis domain protein COGs: COG0303 Molybdopterin biosynthesis enzyme~InterPro IPR005110: IPR001453: IPR005111: IPR020817~KEGG: amt:Amet_0996 molybdenum cofactor synthesis domain-containing protein~PFAM: MoeA%2C N-terminal and linker domain%3B Molybdopterin binding%3B MoeA%2C C-terminal%2C domain IV~SPTR: Molybdenum cofactor synthesis domain%3B~TIGRFAM: Molybdenum cofactor synthesis~PFAM: Probable molybdopterin binding domain%3B MoeA N-terminal region (domain I and II)%3B MoeA C-terminal region (domain IV)~TIGRFAM: molybdenum cofactor synthesis domain gene gene3144 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3080 Sgly_3081 Sgly_3081 Sgly_3081 3132150 3132635 - metal dependent phosphohydrolase%2C HD region COGs: COG0317 Guanosine polyphosphate pyrophosphohydrolase/synthetase~KEGG: pfo:Pfl01_2133 metal dependent phosphohydrolase%2C HD region~SPTR: Putative uncharacterized protein gene gene3145 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3081 Sgly_3082 Sgly_3082 Sgly_3082 3132778 3134013 - phenylacetate-CoA ligase COGs: COG1541 Coenzyme F390 synthetase~InterPro IPR000873~KEGG: cce:Ccel_1392 coenzyme F390 synthetase~PFAM: AMP-dependent synthetase/ligase~PRIAM: Phenylacetate--CoA ligase~SPTR: Phenylacetate--CoA ligase%3B~PFAM: AMP-binding enzyme gene gene3146 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3082 Sgly_3083 Sgly_3083 Sgly_3083 3134024 3134662 - Indolepyruvate ferredoxin oxidoreductase COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit~InterPro IPR019752~KEGG: cce:Ccel_1390 pyruvate ferredoxin/flavodoxin oxidoreductase~PFAM: Pyruvate/ketoisovalerate oxidoreductase%2C catalytic domain~PRIAM: Indolepyruvate ferredoxin oxidoreductase~SPTR: Indolepyruvate ferredoxin oxidoreductase%3B~PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase~TIGRFAM: indolepyruvate ferredoxin oxidoreductase%2C beta subunit gene gene3147 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3083 Sgly_3084 Sgly_3084 Sgly_3084 3134644 3136512 - indolepyruvate ferredoxin oxidoreductase%2C alpha subunit COGs: COG4231 Indolepyruvate ferredoxin oxidoreductase alpha and beta subunits~InterPro IPR002880: IPR011766: IPR017721~KEGG: cce:Ccel_1389 indolepyruvate ferredoxin oxidoreductase%2C alpha subunit~PFAM: Thiamine pyrophosphate enzyme%2C C-terminal TPP-binding%3B Pyruvate flavodoxin/ferredoxin oxidoreductase%2C N-terminal~PRIAM: Indolepyruvate ferredoxin oxidoreductase~SPTR: Indolepyruvate ferredoxin oxidoreductase%2C alpha subunit%3B~TIGRFAM: Indolepyruvate ferredoxin oxidoreductase%2C alpha subunit~PFAM: domain%3B Thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain~TIGRFAM: indolepyruvate ferredoxin oxidoreductase%2C alpha subunit gene gene3148 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3084 Sgly_3085 Sgly_3085 Sgly_3085 3136531 3137310 - cobalt transport protein COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter~InterPro IPR003339~KEGG: pth:PTH_1659 ABC-type cobalt transport system%2C permease component CbiQ and related transporters~PFAM: Cobalt transport protein~SPTR: Cobalt transport protein%3B~PFAM: Cobalt transport protein gene gene3149 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3085 Sgly_3086 Sgly_3086 Sgly_3086 3137307 3138128 - Phosphonate-transporting ATPase COGs: COG1122 ABC-type cobalt transport system ATPase component~InterPro IPR003439: IPR003593~KEGG: pth:PTH_1658 ABC-type cobalt transport system%2C ATPase component~PFAM: ABC transporter-like~PRIAM: Phosphonate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC-type cobalt transport system%2C ATPase component%3B~PFAM: ABC transporter gene gene3150 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3086 Sgly_3087 Sgly_3087 Sgly_3087 3138132 3138980 - Phosphonate-transporting ATPase COGs: COG1122 ABC-type cobalt transport system ATPase component~InterPro IPR003439: IPR003593~KEGG: apv:Apar_0681 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Phosphonate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related protein%3B~PFAM: ABC transporter%3B Cobalt ATP-binding cassette C terminal gene gene3151 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3087 Sgly_3088 Sgly_3088 Sgly_3088 3138985 3139551 - hypothetical protein KEGG: hmo:HM1_0776 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3152 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3088 Sgly_3089 Sgly_3089 Sgly_3089 3140063 3141214 - glycerate kinase COGs: COG1929 Glycerate kinase~InterPro IPR004381~KEGG: dhd:Dhaf_3291 glycerate kinase~PFAM: Glycerate kinase~PRIAM: Glycerate kinase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Glycerate kinase~PFAM: Glycerate kinase family~TIGRFAM: glycerate kinase gene gene3153 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3089 Sgly_3090 Sgly_3090 Sgly_3090 3141324 3142217 - tartronate semialdehyde reductase COGs: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase~InterPro IPR006115: IPR006398~KEGG: dhd:Dhaf_1173 tartronate semialdehyde reductase~PFAM: 6-phosphogluconate dehydrogenase%2C NAD-binding~PRIAM: 2-hydroxy-3-oxopropionate reductase~SPTR: 2-hydroxy-3-oxopropionate reductase%3B~TIGRFAM: 2-hydroxy-3-oxopropionate reductase~PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase~TIGRFAM: 3-hydroxyisobutyrate dehydrogenase%3B 2-hydroxy-3-oxopropionate reductase gene gene3154 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3090 Sgly_3091 Sgly_3091 Sgly_3091 3142304 3143089 - Hydroxypyruvate isomerase COGs: COG3622 Hydroxypyruvate isomerase~InterPro IPR012307~KEGG: bge:BC1002_1353 hydroxypyruvate isomerase~PFAM: Xylose isomerase%2C TIM barrel domain~PRIAM: Hydroxypyruvate isomerase~SPTR: Hydroxypyruvate isomerase%3B~PFAM: Xylose isomerase-like TIM barrel gene gene3155 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3091 Sgly_3092 Sgly_3092 Sgly_3092 3143282 3145048 - Acetolactate synthase COGs: COG0028 Thiamine pyrophosphate-requiring protein~InterPro IPR012001: IPR012000: IPR011766~KEGG: dhd:Dhaf_1175 acetolactate synthase~PFAM: Thiamine pyrophosphate enzyme%2C N-terminal TPP-binding domain%3B Thiamine pyrophosphate enzyme%2C central domain%3B Thiamine pyrophosphate enzyme%2C C-terminal TPP-binding~PRIAM: Acetolactate synthase~SPTR: Acetolactate synthase%3B~PFAM: Thiamine pyrophosphate enzyme%2C central domain%3B Thiamine pyrophosphate enzyme%2C N-terminal TPP binding domain%3B Thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain~TIGRFAM: acetolactate synthase%2C large subunit%2C biosynthetic type gene gene3156 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3092 Sgly_3093 Sgly_3093 Sgly_3093 3145673 3146233 - Phosphoglycerate mutase COGs: COG0406 Fructose-2 6-bisphosphatase~InterPro IPR013078~KEGG: adg:Adeg_1465 alpha-ribazole phosphatase~PFAM: Histidine phosphatase superfamily%2C clade-1~SPTR: Alpha-ribazole phosphatase%3B~PFAM: Phosphoglycerate mutase family gene gene3157 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3093 Sgly_3094 Sgly_3094 Sgly_3094 3146477 3147934 + drug resistance transporter%2C EmrB/QacA subfamily COGs: COG2814 Arabinose efflux permease~InterPro IPR011701: IPR004638~KEGG: tjr:TherJR_0520 drug resistance transporter%2C EmrB/QacA subfamily~PFAM: Major facilitator superfamily MFS-1~SPTR: Drug resistance transporter%2C EmrB/QacA subfamily%3B~TIGRFAM: Drug resistance transporter EmrB/QacA subfamily~PFAM: Major Facilitator Superfamily~TIGRFAM: drug resistance transporter%2C EmrB/QacA subfamily gene gene3158 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3094 Sgly_3095 Sgly_3095 Sgly_3095 3148075 3148419 - hypothetical protein KEGG: dsy:DSY4923 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3159 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3095 Sgly_3096 Sgly_3096 Sgly_3096 3148477 3149241 - N-acetylmuramoyl-L-alanine amidase family 2 COGs: COG5632 N-acetylmuramoyl-L-alanine amidase~InterPro IPR002502~KEGG: dhd:Dhaf_0822 N-acetylmuramoyl-L-alanine amidase family 2~PFAM: N-acetylmuramoyl-L-alanine amidase%2C family 2~SMART: N-acetylmuramoyl-L-alanine amidase%2C family 2~SPTR: Putative uncharacterized protein%3B~PFAM: N-acetylmuramoyl-L-alanine amidase gene gene3160 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3096 Sgly_3097 Sgly_3097 Sgly_3097 3149492 3150100 - formylmethanofuran dehydrogenase subunit E region COGs: COG2191 Formylmethanofuran dehydrogenase subunit E~InterPro IPR003814: IPR001781~KEGG: hmo:HM1_1872 formylmethanofuran dehydrogenase%2C subunit E~PFAM: Formylmethanofuran dehydrogenase%2C subunit E domain%3B Zinc finger%2C LIM-type~SPTR: Formylmethanofuran dehydrogenase%2C subunit e%3B~PFAM: Prokaryotic dksA/traR C4-type zinc finger%3B FmdE%2C Molybdenum formylmethanofuran dehydrogenase operon gene gene3161 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3097 Sgly_3098 Sgly_3098 Sgly_3098 3150121 3151227 - periplasmic binding protein COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component~InterPro IPR002491~KEGG: clj:CLJU_c38000 putative metal ion (Fe 3+) ABC transporter ATPase~PFAM: Periplasmic binding protein~SPTR: Predicted metal ion (Fe 3+) ABC transporter%2C ATPase component%3B~PFAM: Periplasmic binding protein gene gene3162 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3098 Sgly_3099 Sgly_3099 Sgly_3099 3151294 3152046 - Phosphonate-transporting ATPase COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components~InterPro IPR003439: IPR003593~KEGG: clj:CLJU_c38030 putative iron ABC transporter ATPase~PFAM: ABC transporter-like~PRIAM: Phosphonate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Predicted iron ABC transporter%2C ATPase component%3B~PFAM: ABC transporter gene gene3163 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3099 Sgly_3100 Sgly_3100 Sgly_3100 3152043 3153089 - transport system permease protein COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component~InterPro IPR000522~KEGG: clj:CLJU_c38040 putative iron ABC transporter permease~PFAM: Bacterial transport system permease protein~SPTR: Predicted iron ABC transporter%2C permease component%3B~PFAM: FecCD transport family gene gene3164 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3100 Sgly_3101 Sgly_3101 Sgly_3101 3153093 3153539 - Uncharacterized protein family UPF0066 COGs: COG1720 conserved hypothetical protein~InterPro IPR001378~KEGG: tit:Thit_1670 protein of unknown function UPF0066~PFAM: Uncharacterised protein family UPF0066~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Uncharacterised protein family UPF0066~PFAM: Uncharacterised protein family UPF0066~TIGRFAM: probable methyltransferase%2C YaeB/AF_0241 family gene gene3165 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3101 Sgly_3102 Sgly_3102 Sgly_3102 3153551 3154153 - Nickel-transporting ATPase COGs: COG1124 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component~InterPro IPR003439: IPR003593~KEGG: dsy:DSY4092 hypothetical protein~PFAM: ABC transporter-like~PRIAM: Nickel-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~PFAM: ABC transporter gene gene3166 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3102 Sgly_3103 Sgly_3103 Sgly_3103 3154143 3155072 - oligopeptide/dipeptide ABC transporter%2C ATPase subunit COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component~InterPro IPR003439: IPR013563: IPR003593: IPR010066~KEGG: dhd:Dhaf_1863 oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter-like%3B Oligopeptide/dipeptide ABC transporter%2C C-terminal~SMART: ATPase%2C AAA+ type%2C core~SPTR: Oligopeptide/dipeptide ABC transporter%2C ATPase subunit%3B~TIGRFAM: Oligopeptide/dipeptide ABC transporter%2C ATP-binding protein%2C C-terminal~PFAM: ABC transporter%3B Oligopeptide/dipeptide transporter%2C C-terminal region~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATP-binding protein%2C C-terminal domain gene gene3167 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3103 Sgly_3104 Sgly_3104 Sgly_3104 3155099 3155356 - pseudogene gene3168 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3104 Sgly_3105 Sgly_3105 Sgly_3105 3155642 3156706 + protein of unknown function DUF939 COGs: COG4129 membrane protein~KEGG: dhd:Dhaf_2854 protein of unknown function DUF939~SPTR: Putative uncharacterized protein%3B~PFAM: Bacterial protein of unknown function (DUF939) gene gene3169 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3105 Sgly_3106 Sgly_3106 Sgly_3106 3156809 3157441 - SNARE associated Golgi protein-like protein COGs: COG0586 membrane-associated protein~InterPro IPR015414~KEGG: cce:Ccel_0665 SNARE associated Golgi protein~PFAM: SNARE associated Golgi protein~SPTR: SNARE associated Golgi protein%3B~PFAM: SNARE associated Golgi protein gene gene3170 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3106 Sgly_3107 Sgly_3107 Sgly_3107 3157610 3159217 + Na+/Picotransporter COGs: COG1283 Na+/phosphate symporter~InterPro IPR003841~KEGG: mta:Moth_1817 Na/Pi cotransporter II-related~PFAM: Na/Pi-cotransporter~SPTR: Na/Pi cotransporter II-related%3B~PFAM: PhoU domain%3B Na+/Pi-cotransporter~TIGRFAM: Na/Pi-cotransporter gene gene3171 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3107 Sgly_3108 Sgly_3108 Sgly_3108 3159268 3159879 - Radical SAM domain protein COGs: COG0602 Organic radical activating protein~InterPro IPR007197~KEGG: mar:MAE_25790 hypothetical protein~PFAM: Radical SAM~SPTR: Radical SAM domain protein%3B~PFAM: Radical SAM superfamily gene gene3172 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3108 Sgly_3109 Sgly_3109 Sgly_3109 3159857 3160243 - queuosine biosynthesis protein QueD COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase~InterPro IPR007115~KEGG: tit:Thit_2036 6-pyruvoyl tetrahydropterin synthase and hypothetical protein~PFAM: 6-pyruvoyl tetrahydropterin synthase-related~SPTR: Putative uncharacterized protein%3B~TIGRFAM: queuosine biosynthesis protein QueD~PFAM: 6-pyruvoyl tetrahydropterin synthase~TIGRFAM: queuosine biosynthesis protein QueD%3B 6-pyruvoyl tetrahydropterin synthase/QueD family protein gene gene3173 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3109 Sgly_3110 Sgly_3110 Sgly_3110 3160249 3160944 - exsB protein COGs: COG0603 PP-loop superfamily ATPase~InterPro IPR018317: IPR004479~KEGG: eel:EUBELI_20136 queuosine biosynthesis protein QueC~PFAM: Queuosine synthesis-like~SPTR: PreQ(0) biosynthesis protein QueC%3B~TIGRFAM: Exoenzyme S synthesis protein B/queuosine synthesis~PFAM: ExsB~TIGRFAM: exsB protein gene gene3174 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3110 Sgly_3111 Sgly_3111 Sgly_3111 3161215 3161994 + histidinol phosphate phosphatase HisJ family COGs: COG1387 Histidinol phosphatase and related hydrolase of the PHP family~InterPro IPR004013: IPR010140~KEGG: hmo:HM1_1034 histidinol-phosphatase~PFAM: PHP%2C C-terminal~PRIAM: Histidinol-phosphatase~SPTR: Histidinol phosphate phosphatase%2C hisj family%2C putative%3B~TIGRFAM: Histidinol phosphate phosphatase%2C HisJ~PFAM: PHP domain~TIGRFAM: histidinol phosphate phosphatase HisJ family gene gene3175 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3111 Sgly_3112 Sgly_3112 Sgly_3112 3162009 3163520 - uroporphyrinogen-III C-methyltransferase%3B uroporphyrinogen-III synthase COGs: COG0007 Uroporphyrinogen-III methylase~InterPro IPR000878: IPR003754: IPR006366~KEGG: dsy:DSY2224 hypothetical protein~PFAM: Tetrapyrrole methylase%3B Tetrapyrrole biosynthesis%2C uroporphyrinogen III synthase~PRIAM: Uroporphyrinogen-III C-methyltransferase.%2C Uroporphyrinogen-III synthase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Uroporphyrin-III C-methyltransferase%2C C-terminal~PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases%3B Uroporphyrinogen-III synthase HemD~TIGRFAM: uroporphyrin-III C-methyltransferase gene gene3176 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3112 Sgly_3113 Sgly_3113 Sgly_3113 3163523 3164440 - hydroxymethylbilane synthase COGs: COG0181 Porphobilinogen deaminase~HAMAP: Tetrapyrrole biosynthesis%2C hydroxymethylbilane synthase~InterPro IPR000860~KEGG: dhd:Dhaf_3354 porphobilinogen deaminase~PFAM: Tetrapyrrole biosynthesis%2C hydroxymethylbilane synthase~SPTR: Porphobilinogen deaminase%3B~TIGRFAM: Tetrapyrrole biosynthesis%2C hydroxymethylbilane synthase~PFAM: Porphobilinogen deaminase%2C C-terminal domain%3B Porphobilinogen deaminase%2C dipyromethane cofactor binding domain~TIGRFAM: porphobilinogen deaminase gene gene3177 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3113 Sgly_3114 Sgly_3114 Sgly_3114 3164437 3165024 - pseudogene gene3178 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3114 Sgly_3115 Sgly_3115 Sgly_3115 3165193 3165330 - hypothetical protein SPTR: Conserved domain protein gene gene3179 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3115 Sgly_3116 Sgly_3116 Sgly_3116 3165330 3165518 - hypothetical protein KEGG: ecb:100063098 RUN and FYVE domain containing 2~SPTR: Transcription factor gene gene3180 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3116 Sgly_3117 Sgly_3117 Sgly_3117 3165518 3167236 - hypothetical protein KEGG: apr:Apre_0859 hypothetical protein~SPTR: Predicted protein gene gene3181 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3117 Sgly_3118 Sgly_3118 Sgly_3118 3167313 3168479 - RNA-directed DNA polymerase (Reverse transcriptase) InterPro IPR000477~KEGG: drm:Dred_1227 RNA-directed DNA polymerase (reverse transcriptase)~PFAM: RNA-directed DNA polymerase (reverse transcriptase)~SPTR: RNA-directed DNA polymerase%3B~PFAM: Reverse transcriptase (RNA-dependent DNA polymerase) gene gene3182 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3118 Sgly_3119 Sgly_3119 Sgly_3119 3168700 3169035 - hypothetical protein KEGG: drm:Dred_1226 hypothetical protein~SPTR: Predicted protein%3B~PFAM: S23 ribosomal protein gene gene3183 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3119 Sgly_3120 Sgly_3120 Sgly_3120 3169016 3169246 - hypothetical protein KEGG: ath:AT4G04695 CPK31%3B ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase~SPTR: Predicted protein gene gene3184 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3120 Sgly_3121 Sgly_3121 Sgly_3121 3169278 3169592 - hypothetical protein KEGG: bbe:BBR47_53600 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3185 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3121 Sgly_3122 Sgly_3122 Sgly_3122 3169576 3169899 - hypothetical protein KEGG: dae:Dtox_4253 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3186 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3122 Sgly_3123 Sgly_3123 Sgly_3123 3169902 3170741 - hypothetical protein KEGG: pmx:PERMA_1821 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3187 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3123 Sgly_3124 Sgly_3124 Sgly_3124 3170746 3171876 - hypothetical protein COGs: COG3299 Uncharacterized homolog of phage Mu protein gp47~KEGG: pmx:PERMA_1809 hypothetical protein~SPTR: Baseplate J family protein%3B~PFAM: Baseplate J-like protein gene gene3188 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3124 Sgly_3125 Sgly_3125 Sgly_3125 3171869 3172282 - baseplate assembly protein%2C putative KEGG: dvu:DVU1103 baseplate assembly protein%2C putative~SPTR: Predicted protein gene gene3189 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3125 Sgly_3126 Sgly_3126 Sgly_3126 3172282 3172566 - hypothetical protein KEGG: mma:MM_2821 tryptophan synthase subunit alpha~SPTR: Predicted protein gene gene3190 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3126 Sgly_3127 Sgly_3127 Sgly_3127 3172584 3173339 - hypothetical protein KEGG: coc:Coch_0642 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3191 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3127 Sgly_3128 Sgly_3128 Sgly_3128 3173356 3173949 - hypothetical protein KEGG: dvm:DvMF_1299 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3192 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3128 Sgly_3129 Sgly_3129 Sgly_3129 3173952 3176390 - phage tail tape measure protein%2C TP901 family InterPro IPR010090~KEGG: dde:Dde_0934 phage tail tape measure protein TP901%2C core region~PFAM: Phage tail tape measure protein TP901%2C core region~SPTR: Phage tail tape measure protein core region%3B~TIGRFAM: Phage tail tape measure protein TP901%2C core region~PFAM: Phage-related minor tail protein~TIGRFAM: phage tail tape measure protein%2C TP901 family%2C core region gene gene3193 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3129 Sgly_3130 Sgly_3130 Sgly_3130 3176442 3176681 + hypothetical protein SPTR: Predicted protein gene gene3194 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3130 Sgly_3131 Sgly_3131 Sgly_3131 3176698 3176886 - hypothetical protein SPTR: Putative uncharacterized protein gene gene3195 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3131 Sgly_3132 Sgly_3132 Sgly_3132 3176904 3177284 - hypothetical protein KEGG: dvm:DvMF_1296 hypothetical protein~SPTR: Predicted protein gene gene3196 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3132 Sgly_3133 Sgly_3133 Sgly_3133 3177319 3177756 - hypothetical protein KEGG: dvu:DVU1110 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3197 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3133 Sgly_3134 Sgly_3134 Sgly_3134 3177776 3179206 - hypothetical protein KEGG: mrb:Mrub_1955 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF2586) gene gene3198 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3134 Sgly_3135 Sgly_3135 Sgly_3135 3179207 3179425 - hypothetical protein KEGG: dvu:DVU1112 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3199 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3135 Sgly_3136 Sgly_3136 Sgly_3136 3179415 3179927 - hypothetical protein KEGG: pmz:HMPREF0659_A7225 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3200 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3136 Sgly_3137 Sgly_3137 Sgly_3137 3179930 3180430 - phage virion morphogenesis protein COGs: COG5005 Mu-like prophage protein gpG~InterPro IPR006522~KEGG: dde:Dde_3379 phage virion morphogenesis (putative tail completion) protein~SPTR: Phage virion morphogeneis protein%3B~TIGRFAM: Phage virion morphogenesis (putative tail completion) protein~PFAM: Phage virion morphogenesis family~TIGRFAM: phage virion morphogenesis (putative tail completion) protein gene gene3201 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3137 Sgly_3138 Sgly_3138 Sgly_3138 3180431 3180880 - protein of unknown function DUF1320 COGs: COG4387 Mu-like prophage protein gp36~InterPro IPR009752~KEGG: sat:SYN_02296 Mu-like prophage FluMu protein GP36~PFAM: Protein of unknown function DUF1320~SPTR: Predicted protein%3B~PFAM: Protein of unknown function (DUF1320) gene gene3202 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3138 Sgly_3139 Sgly_3139 Sgly_3139 3180895 3181782 - major head subunit protein COGs: COG4397 Mu-like prophage major head subunit gpT~KEGG: ecg:E2348C_2664 predicted major head subunit protein~SPTR: Putative uncharacterized protein%3B~PFAM: Mu-like prophage major head subunit gpT gene gene3203 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3139 Sgly_3140 Sgly_3140 Sgly_3140 3181810 3182220 - hypothetical protein KEGG: mag:amb1767 hypothetical protein~SPTR: Hypothetical cytosolic protein gene gene3204 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3140 Sgly_3141 Sgly_3141 Sgly_3141 3182222 3183277 - Mu-like prophage I protein COGs: COG4388 Mu-like prophage I protein~InterPro IPR019295~KEGG: sat:SYN_02300 Mu-like prophage FluMu I protein~PFAM: Mu-like prophage I protein~SPTR: Putative uncharacterized protein%3B~PFAM: Mu-like prophage I protein gene gene3205 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3141 Sgly_3142 Sgly_3142 Sgly_3142 3183415 3184158 - phage head morphogenesis protein%2C SPP1 gp7 family COGs: COG2369 conserved hypothetical protein homolog of phage Mu protein gp30~InterPro IPR006528~KEGG: dvu:DVU1119 virion morphogenesis protein~PFAM: Phage putative head morphogenesis protein%2C SPP1 gp7~SPTR: Phage putative head morphogenesis protein%2C SPP1 gp7 family%3B~TIGRFAM: Phage putative head morphogenesis protein%2C SPP1 gp7~PFAM: Phage Mu protein F like protein~TIGRFAM: phage putative head morphogenesis protein%2C SPP1 gp7 family gene gene3206 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3142 Sgly_3143 Sgly_3143 Sgly_3143 3184151 3185764 - protein of unknown function DUF935 COGs: COG4383 Mu-like prophage protein gp29~InterPro IPR009279~KEGG: sat:SYN_02303 Mu-like prophage FluMu protein GP29~PFAM: Protein of unknown function DUF935~SPTR: Phage head morphogenesis protein%3B~PFAM: Protein of unknown function (DUF935) gene gene3207 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3143 Sgly_3144 Sgly_3144 Sgly_3144 3185779 3187539 - phage uncharacterized protein InterPro IPR006517~KEGG: dae:Dtox_4228 phage uncharacterized protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Phage uncharacterised protein%2C C-terminal~PFAM: Terminase-like family~TIGRFAM: phage uncharacterized protein (putative large terminase)%2C C-terminal domain gene gene3208 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3144 Sgly_3145 Sgly_3145 Sgly_3145 3187532 3188092 - hypothetical protein KEGG: amt:Amet_1950 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF3486) gene gene3209 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3145 Sgly_3146 Sgly_3146 Sgly_3146 3188092 3188406 - hypothetical protein KEGG: amt:Amet_4370 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3210 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3146 Sgly_3147 Sgly_3147 Sgly_3147 3188411 3188707 - hypothetical protein KEGG: amt:Amet_4371 hypothetical protein~SPTR: Predicted protein gene gene3211 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3147 Sgly_3148 Sgly_3148 Sgly_3148 3188720 3189154 - hypothetical protein KEGG: amt:Amet_4372 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3212 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3148 Sgly_3149 Sgly_3149 Sgly_3149 3189210 3189326 + hypothetical protein gene gene3213 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3149 Sgly_3150 Sgly_3150 Sgly_3150 3189275 3189604 - Mor transcription activator domain protein InterPro IPR014875~KEGG: amt:Amet_4373 hypothetical protein~PFAM: Mor transcription activator~SPTR: Mor transcription activator family%3B~PFAM: Mor transcription activator family gene gene3214 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3150 Sgly_3151 Sgly_3151 Sgly_3151 3189623 3191113 - cell wall hydrolase/autolysin COGs: COG0860 N-acetylmuramoyl-L-alanine amidase~InterPro IPR002508~KEGG: cno:NT01CX_2058 hypothetical protein~PFAM: Cell wall hydrolase/autolysin%2C catalytic~SMART: Cell wall hydrolase/autolysin%2C catalytic~SPTR: N-acetylmuramoyl-L-alanine amidase%3B~PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase%3B N-acetylmuramoyl-L-alanine amidase gene gene3215 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3151 Sgly_3152 Sgly_3152 Sgly_3152 3191126 3191512 - hypothetical protein KEGG: bsb:Bresu_2241 ribosomal protein S21~SPTR: Toxin-antitoxin system%2C toxin component%2C RelE family gene gene3216 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3152 Sgly_3153 Sgly_3153 Sgly_3153 3191487 3191957 - hypothetical protein KEGG: amt:Amet_4387 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1018) gene gene3217 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3153 Sgly_3154 Sgly_3154 Sgly_3154 3191969 3192481 - prophage MuMc02%2C host-nuclease inhibitor protein KEGG: mca:MCA2948 prophage MuMc02%2C host-nuclease inhibitor protein~SPTR: Bacteriophage Mu Gam like protein%3B~PFAM: Bacteriophage Mu Gam like protein gene gene3218 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3154 Sgly_3155 Sgly_3155 Sgly_3155 3192481 3192789 - hypothetical protein KEGG: tel:tlr1124 putative branched chain ABC transporter ATP-binding protein~SPTR: GTP-binding protein engA gene gene3219 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3155 Sgly_3156 Sgly_3156 Sgly_3156 3192810 3193802 - transcriptional regulator%2C XRE family COGs: COG2842 Uncharacterized ATPase putative transposase~KEGG: amt:Amet_4393 hypothetical protein~SPTR: Uncharacterized ATPase%2C putative transposase%3B~PFAM: Helix-turn-helix gene gene3220 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3156 Sgly_3157 Sgly_3157 Sgly_3157 3193802 3195886 - Transposase-like Mu InterPro IPR001584: IPR015378~KEGG: amt:Amet_0388 transposase~PFAM: Transposase-like%2C Mu%2C C-terminal%3B Integrase%2C catalytic core~SPTR: Mu transposase%2C C-superfamily%3B~PFAM: Mu transposase%2C C-terminal%3B Bacteriophage Mu transposase gene gene3221 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3157 Sgly_3158 Sgly_3158 Sgly_3158 3196045 3196356 - hypothetical protein KEGG: tva:TVAG_193760 DNA-directed RNA polymerase%2C omega subunit family protein~SPTR: DNA-directed RNA polymerase%2C omega subunit family protein gene gene3222 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3158 Sgly_3159 Sgly_3159 Sgly_3159 3196370 3196588 - helix-turn-helix domain protein InterPro IPR001387~KEGG: cac:CA_C3639 CRO repressor-like DNA-binding protein~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3~SPTR: CRO repressor-like DNA-binding protein%3B~PFAM: Helix-turn-helix gene gene3223 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3159 Sgly_3160 Sgly_3160 Sgly_3160 3196831 3197112 - hypothetical protein KEGG: dae:Dtox_4208 hypothetical protein~SPTR: Putative uncharacterized protein%3B~manually curated gene gene3224 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3160 Sgly_3161 Sgly_3161 Sgly_3161 3197099 3197341 - hypothetical protein KEGG: bss:BSUW23_09720 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3225 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3161 Sgly_3162 Sgly_3162 Sgly_3162 3197496 3197930 + helix-turn-helix domain protein InterPro IPR001387~KEGG: amt:Amet_4400 XRE family plasmid maintenance system antidote protein~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3~SPTR: Phage transcriptional regulator%3B~PFAM: Helix-turn-helix gene gene3226 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3162 Sgly_3163 Sgly_3163 Sgly_3163 3198580 3200013 - response regulator receiver modulated metal dependent phosphohydrolase COGs: COG2206 HD-GYP domain~InterPro IPR001789: IPR006674: IPR003607~KEGG: cth:Cthe_0725 response regulator receiver modulated metal dependent phosphohydrolase~PFAM: Metal-dependent phosphohydrolase%2C HD subdomain%3B Signal transduction response regulator%2C receiver domain~SMART: Signal transduction response regulator%2C receiver domain%3B Metal-dependent phosphohydrolase%2C HD domain~SPTR: Response regulator receiver modulated metal dependent phosphohydrolase%3B~PFAM: Domain of unknown function (DUF3369)%3B HD domain%3B Response regulator receiver domain~TIGRFAM: uncharacterized domain HDIG gene gene3227 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3163 Sgly_3164 Sgly_3164 Sgly_3164 3200010 3201851 - integral membrane sensor signal transduction histidine kinase COGs: COG0642 Signal transduction histidine kinase~InterPro IPR003594~KEGG: cce:Ccel_2145 histidine kinase~PFAM: ATPase-like%2C ATP-binding domain~SMART: ATPase-like%2C ATP-binding domain~SPTR: Putative uncharacterized protein%3B~PFAM: Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase~TIGRFAM: PAS domain S-box gene gene3228 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3164 Sgly_3165 Sgly_3165 Sgly_3165 3201880 3206229 - amino acid adenylation domain protein COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein~InterPro IPR001242: IPR000873: IPR006163: IPR013120: IPR 010071: IPR010080~KEGG: bcg:BCG9842_B4376 linear gramicidin synthetase subunit D~PFAM: AMP-dependent synthetase/ligase%3B Condensation domain%3B Phosphopantetheine-binding%3B Male sterility%2C NAD-binding~PRIAM: Phenylalanine racemase (ATP-hydrolyzing)~SPTR: Amino acid adenylation domain protein%3B~TIGRFAM: Amino acid adenylation%3B Thioester reductase~PFAM: Male sterility protein%3B Phosphopantetheine attachment site%3B AMP-binding enzyme%3B Condensation domain~TIGRFAM: amino acid adenylation domain%3B thioester reductase domain gene gene3229 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3165 Sgly_3166 Sgly_3166 Sgly_3166 3206457 3206828 - protein of unknown function DUF307 InterPro IPR005185~KEGG: rca:Rcas_2965 hypothetical protein~PFAM: Protein of unknown function DUF307~SPTR: Putative uncharacterized protein%3B~PFAM: Domain of unknown function (DUF307) gene gene3230 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3166 Sgly_3167 Sgly_3167 Sgly_3167 3206825 3207397 - NAD(P)H dehydrogenase (quinone) COGs: COG0431 flavoprotein~InterPro IPR005025~KEGG: rci:RRC291 NADPH-dependent FMN reductase~PFAM: NADPH-dependent FMN reductase~PRIAM: NAD(P)H dehydrogenase (quinone)~SPTR: NADPH dehydrogenase quinone:NADPH dependent FMN reductase%3B~PFAM: NADPH-dependent FMN reductase gene gene3231 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3167 Sgly_3168 Sgly_3168 Sgly_3168 3207422 3207847 - UspA domain-containing protein COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein~InterPro IPR006016~KEGG: dhd:Dhaf_0384 UspA domain protein~PFAM: UspA~SPTR: Putative uncharacterized protein%3B~PFAM: Universal stress protein family gene gene3232 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3168 Sgly_3169 Sgly_3169 Sgly_3169 3207967 3208836 - hypothetical protein COGs: COG2107 periplasmic solute-binding protein~KEGG: drm:Dred_3234 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Putative periplasminc binding protein (DUF178) gene gene3233 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3169 Sgly_3170 Sgly_3170 Sgly_3170 3208836 3209492 - futalosine nucleosidase COGs: COG0775 Nucleoside phosphorylase~InterPro IPR000845: IPR019963~KEGG: dau:Daud_0261 hypothetical protein~PFAM: Nucleoside phosphorylase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Futalosine nucleosidase~PFAM: Phosphorylase superfamily~TIGRFAM: futalosine nucleosidase gene gene3234 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3170 Sgly_3171 Sgly_3171 Sgly_3171 3209505 3210071 - hypothetical protein KEGG: lpp:lpp0028 hypothetical protein~SPTR:2-nonaprenyl-3-methyl-6-methoxy-1%2C4-benzoquino lhydroxylase%3B~PFAM: Ubiquinone biosynthesis protein COQ7 gene gene3235 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3171 Sgly_3172 Sgly_3172 Sgly_3172 3210131 3211588 - integral membrane sensor signal transduction histidine kinase COGs: COG0642 Signal transduction histidine kinase~InterPro IPR003660: IPR003661: IPR003594~KEGG: tjr:TherJR_2683 integral membrane sensor signal transduction histidine kinase~PFAM: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain%3B HAMP linker domain~SMART: ATPase-like%2C ATP-binding domain%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor domain%3B HAMP linker domain~SPTR: Integral membrane sensor signal transduction histidine kinase%3B~PFAM: HAMP domain%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain gene gene3236 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3172 Sgly_3173 Sgly_3173 Sgly_3173 3211557 3212243 - two component transcriptional regulator%2C winged helix family COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR001789: IPR001867~KEGG: tjr:TherJR_2684 two component transcriptional regulator%2C winged helix family~PFAM: Signal transduction response regulator%2C receiver domain%3B Signal transduction response regulator%2C C-terminal~SMART: Signal transduction response regulator%2C receiver domain~SPTR: Two component transcriptional regulator%2C winged helix family%3B~PFAM: Response regulator receiver domain%3B Transcriptional regulatory protein%2C C terminal gene gene3237 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3173 Sgly_3174 Sgly_3174 Sgly_3174 3212386 3212967 - hypothetical protein KEGG: clj:CLJU_c17300 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3238 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3174 Sgly_3175 Sgly_3175 Sgly_3175 3213120 3213290 - protein of unknown function DUF1540 InterPro IPR011437~KEGG: cce:Ccel_2311 protein of unknown function DUF1540~PFAM: Protein of unknown function DUF1540~SPTR: Putative uncharacterized protein%3B~PFAM: Domain of Unknown Function (DUF1540) gene gene3239 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3175 Sgly_3176 Sgly_3176 Sgly_3176 3213429 3214283 - spermidine synthase COGs: COG0421 Spermidine synthase~HAMAP: Spermidine synthase~InterPro IPR001045~KEGG: dhd:Dhaf_0182 spermidine synthase~PFAM: Spermine synthase~SPTR: Spermidine synthase%3B~TIGRFAM: Spermine synthase~PFAM: Spermine/spermidine synthase~TIGRFAM: spermidine synthase gene gene3240 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3176 Sgly_3177 Sgly_3177 Sgly_3177 3214287 3215738 - arginine decarboxylase COGs: COG1982 Arginine/lysine/ornithine decarboxylase~InterPro IPR000310: IPR008286~KEGG: dsy:DSY0236 hypothetical protein~PFAM: Orn/Lys/Arg decarboxylase%2C major domain%3B Orn/Lys/Arg decarboxylase%2C C-terminal~PRIAM: Arginine decarboxylase~SPTR: Putative uncharacterized protein%3B~PFAM: Orn/Lys/Arg decarboxylase%2C C-terminal domain%3B Orn/Lys/Arg decarboxylase%2C major domain gene gene3241 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3177 Sgly_3178 Sgly_3178 Sgly_3178 3215832 3216965 - carboxynorspermidine decarboxylase COGs: COG0019 Diaminopimelate decarboxylase~InterPro IPR000183: IPR005730~KEGG: bha:BH3958 carboxynorspermidine decarboxylase~PFAM: Orn/DAP/Arg decarboxylase 2~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Carboxynorspermidine decarboxylase~manually curated~PFAM: Pyridoxal-dependent decarboxylase%2C C-terminal sheet domain~TIGRFAM: carboxynorspermidine decarboxylase gene gene3242 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3178 Sgly_3179 Sgly_3179 Sgly_3179 3216965 3218164 - carboxynorspermidine dehydrogenase COGs: COG1748 Saccharopine dehydrogenase and related protein~InterPro IPR005097~KEGG: bha:BH3957 hypothetical protein~PFAM: Saccharopine dehydrogenase / Homospermidine synthase~SPTR: Saccharopine dehydrogenase%3B~PFAM: Saccharopine dehydrogenase gene gene3243 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3179 Sgly_3180 Sgly_3180 Sgly_3180 3218703 3219317 - lipolytic protein G-D-S-L family COGs: COG2755 Lysophospholipase L1 and related esterase~InterPro IPR001087~KEGG: dhd:Dhaf_4289 lipolytic protein G-D-S-L family~PFAM: Lipase%2C GDSL~SPTR: Hrd4-2%3B~PFAM: GDSL-like Lipase/Acylhydrolase gene gene3244 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3180 Sgly_3181 Sgly_3181 Sgly_3181 3219549 3219656 + hypothetical protein KEGG: dhd:Dhaf_2822 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3245 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3181 Sgly_3182 Sgly_3182 Sgly_3182 3219691 3219831 + hypothetical protein KEGG: dhd:Dhaf_3476 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3246 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3182 Sgly_3183 Sgly_3183 Sgly_3183 3219980 3220735 - metal dependent phosphohydrolase COGs: COG2206 HD-GYP domain~InterPro IPR006674: IPR003607: IPR006675~KEGG: dhd:Dhaf_0175 metal dependent phosphohydrolase~PFAM: Metal-dependent phosphohydrolase%2C HD subdomain~SMART: Metal-dependent phosphohydrolase%2C HD domain~SPTR: Putative uncharacterized protein%3B~TIGRFAM: HDIG~PFAM: HD domain~TIGRFAM: uncharacterized domain HDIG gene gene3247 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3183 Sgly_3184 Sgly_3184 Sgly_3184 3221030 3221590 + integrase family protein InterPro IPR002104~KEGG: dhd:Dhaf_0174 integrase family protein~PFAM: Integrase%2C catalytic core%2C phage~SPTR: Putative uncharacterized protein%3B~PFAM: Phage integrase family gene gene3248 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3184 Sgly_3185 Sgly_3185 Sgly_3185 3221876 3222961 - A/G-specific adenine glycosylase COGs: COG1194 A/G-specific DNA glycosylase~InterPro IPR003265: IPR003651: IPR005760~KEGG: aoe:Clos_2291 A/G-specific adenine glycosylase~PFAM: HhH-GPD domain%3B Endonuclease III-like%2C iron-sulphur cluster loop motif~SMART: HhH-GPD domain~SPTR: Putative uncharacterized protein%3B~TIGRFAM: A/G-specific adenine glycosylase MutY%2C bacterial form~PFAM: HhH-GPD superfamily base excision DNA repair protein%3B Helix-hairpin-helix motif~TIGRFAM: A/G-specific adenine glycosylase gene gene3249 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3185 Sgly_3186 Sgly_3186 Sgly_3186 3223185 3223397 - molybdenum-pterin binding protein COGs: COG3585 Molybdopterin-binding protein~InterPro IPR005116: IPR004606~KEGG: aap:NT05HA_0786 hypothetical protein~PFAM: Transport-associated OB%2C type 1~SPTR: Molybdopterin-binding protein%3B~TIGRFAM: Molybdenum-pterin binding~PFAM: TOBE domain~TIGRFAM: molybdenum-pterin binding domain gene gene3250 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3186 Sgly_3187 Sgly_3187 Sgly_3187 3223580 3224389 + Chloride peroxidase COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily)~InterPro IPR000073~KEGG: ctc:CTC01150 non-heme chloroperoxidase~PFAM: Alpha/beta hydrolase fold-1~PRIAM: Chloride peroxidase~SPTR: Alpha/beta hydrolase fold protein%3B~PFAM: alpha/beta hydrolase fold gene gene3251 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3187 Sgly_3188 Sgly_3188 Sgly_3188 3224424 3225509 - metal dependent phosphohydrolase COGs: COG2206 HD-GYP domain~InterPro IPR006674: IPR003607~KEGG: cac:CA_C3650 HD-GYP domain-containing protein~PFAM: Metal-dependent phosphohydrolase%2C HD subdomain~SMART: Metal-dependent phosphohydrolase%2C HD domain~SPTR: HD domain protein%3B~PFAM: HD domain~TIGRFAM: uncharacterized domain HDIG gene gene3252 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3188 Sgly_3189 Sgly_3189 Sgly_3189 3226098 3226298 + transcriptional regulator%2C XRE family COGs: COG1476 transcriptional regulator protein~InterPro IPR001387~KEGG: cbi:CLJ_B0515 hypothetical protein~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3~SPTR: Putative uncharacterized protein%3B~PFAM: Helix-turn-helix gene gene3253 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3189 Sgly_3190 Sgly_3190 Sgly_3190 3226295 3226783 + hypothetical protein KEGG: llk:LLKF_0306 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3254 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3190 Sgly_3191 Sgly_3191 Sgly_3191 3226821 3227189 - Endoribonuclease L-PSP COGs: COG0251 Putative translation initiation inhibitor yjgF family~InterPro IPR006175~KEGG: ccb:Clocel_1618 endoribonuclease L-PSP~PFAM: Endoribonuclease L-PSP~SPTR: Endoribonuclease L-PSP%3B~PFAM: Endoribonuclease L-PSP gene gene3255 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3191 Sgly_3192 Sgly_3192 Sgly_3192 3227265 3228182 - helix-turn-helix type 11 domain-containing protein COGs: COG2378 transcriptional regulator protein~KEGG: cpy:Cphy_2042 helix-turn-helix type 11 domain-containing protein~SPTR: Putative uncharacterized protein%3B~PFAM: HTH domain gene gene3256 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3192 Sgly_3193 Sgly_3193 Sgly_3193 3228362 3229540 - major facilitator superfamily MFS_1 COGs: COG0738 Fucose permease~InterPro IPR011701~KEGG: cpy:Cphy_2115 major facilitator transporter~PFAM: Major facilitator superfamily MFS-1~SPTR: Major facilitator superfamily MFS_1%3B~PFAM: Major Facilitator Superfamily gene gene3257 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3193 Sgly_3194 Sgly_3194 Sgly_3194 3229737 3230300 - metal dependent phosphohydrolase COGs: COG2316 hydrolase (HD superfamily)~InterPro IPR006675~KEGG: cce:Ccel_3184 metal dependent phophohydrolase~SPTR: Metal dependent phophohydrolase%3B~TIGRFAM: HDIG~TIGRFAM: uncharacterized domain HDIG gene gene3258 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3194 Sgly_3195 Sgly_3195 Sgly_3195 3230358 3230675 - hypothetical protein KEGG: dau:Daud_0754 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3259 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3195 Sgly_3196 Sgly_3196 Sgly_3196 3230902 3231555 - SNARE associated Golgi protein-like protein COGs: COG0586 membrane-associated protein~InterPro IPR015414~KEGG: cce:Ccel_1169 SNARE associated Golgi protein~PFAM: SNARE associated Golgi protein~SPTR: SNARE associated Golgi protein%3B~PFAM: SNARE associated Golgi protein gene gene3260 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3196 Sgly_3197 Sgly_3197 Sgly_3197 3231606 3232028 - UspA domain-containing protein COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein~InterPro IPR006016~KEGG: dsy:DSY4453 hypothetical protein~PFAM: UspA~SPTR: Putative uncharacterized protein%3B~PFAM: Universal stress protein family gene gene3261 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3197 Sgly_3198 Sgly_3198 Sgly_3198 3232135 3232812 - integral membrane protein%2C YjbE family COGs: COG0861 Membrane protein TerC possibly involved in tellurium resistance~InterPro IPR005496~KEGG: gtn:GTNG_0523 hypothetical protein~PFAM: Integral membrane protein TerC~SPTR: Integral membrane protein TerC%3B~TIGRFAM: integral membrane protein%2C YjbE family~PFAM: Integral membrane protein TerC family~TIGRFAM: integral membrane protein%2C YjbE family gene gene3262 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3198 Sgly_3199 Sgly_3199 Sgly_3199 3233197 3234483 - hypothetical protein KEGG: gym:GYMC10_1090 Ig domain protein group 2 domain protein~SPTR: Putative uncharacterized protein gene gene3263 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3199 Sgly_3200 Sgly_3200 Sgly_3200 3235302 3235556 + pseudogene gene3264 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3200 Sgly_3201 Sgly_3201 Sgly_3201 3235869 3236378 - HNH nuclease InterPro IPR003615~KEGG: cbb:CLD_2270 hypothetical protein~SMART: HNH nuclease~SPTR: Putative uncharacterized protein%3B~PFAM: HNH endonuclease gene gene3265 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3201 Sgly_3202 Sgly_3202 Sgly_3202 3236678 3236947 - pseudogene gene3266 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3202 Sgly_3203 Sgly_3203 Sgly_3203 3237090 3237512 - nucleotidyltransferase substrate binding protein%2C HI0074 family InterPro IPR010235~KEGG: dhd:Dhaf_0348 nucleotidyltransferase substrate binding protein%2C HI0074 family~PFAM: Nucleotidyltransferase substrate binding protein%2C HI0074~SPTR: Nucleotidyltransferase substrate binding protein%2C HI0074 family%3B~TIGRFAM: Nucleotidyltransferase substrate binding protein%2C HI0074~PFAM: Nucleotidyltransferase substrate binding protein like~TIGRFAM: nucleotidyltransferase substrate binding protein%2C HI0074 family gene gene3267 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3203 Sgly_3205 Sgly_3205 Sgly_3205 3238719 3239711 - hypothetical protein KEGG: bcy:Bcer98_2036 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3269 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3205 Sgly_3206 Sgly_3206 Sgly_3206 3239766 3240236 - SsrA-binding protein COGs: COG0691 tmRNA-binding protein~HAMAP: SsrA-binding protein~InterPro IPR000037~KEGG: dhd:Dhaf_4712 SsrA-binding protein~PFAM: SsrA-binding protein~SPTR: SsrA-binding protein%3B~TIGRFAM: SsrA-binding protein~PFAM: SmpB protein~TIGRFAM: SsrA-binding protein gene gene3270 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3206 Sgly_3207 Sgly_3207 Sgly_3207 3240443 3241204 - putative esterase/lipase COGs: COG1647 Esterase/lipase~KEGG: nth:Nther_2012 putative esterase/lipase~SPTR: Carboxylesterase%3B~PFAM: BAAT / Acyl-CoA thioester hydrolase C terminal gene gene3271 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3207 Sgly_3208 Sgly_3208 Sgly_3208 3241413 3242015 + Methyltransferase type 11 COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis~InterPro IPR013216~KEGG: tte:TTE0594 SAM-dependent methyltransferase~PFAM: Methyltransferase type 11~SPTR: SAM-dependent methyltransferases%3B~PFAM: Methyltransferase domain gene gene3272 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3208 Sgly_3209 Sgly_3209 Sgly_3209 3242121 3244121 - Pyrophosphate-energized proton pump COGs: COG3808 Inorganic pyrophosphatase~HAMAP: Pyrophosphate-energized proton pump~InterPro IPR004131~KEGG: dhd:Dhaf_4713 membrane-bound proton-translocating pyrophosphatase~PFAM: Inorganic H+ pyrophosphatase~PRIAM: Inorganic diphosphatase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Inorganic H+ pyrophosphatase~PFAM: Inorganic H+ pyrophosphatase~TIGRFAM: vacuolar-type H(+)-translocating pyrophosphatase gene gene3273 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3209 Sgly_3210 Sgly_3210 Sgly_3210 3244199 3244429 - protein translocase subunit secG InterPro IPR004692~KEGG: hmo:HM1_1317 preprotein translocase%2C SecG subunit~PFAM: Preprotein translocase SecG subunit~SPTR: Preprotein translocase%2C secg subunit%3B~TIGRFAM: Preprotein translocase SecG subunit~PFAM: Preprotein translocase SecG subunit~TIGRFAM: protein translocase%2C SecG subunit gene gene3274 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3210 Sgly_3211 Sgly_3211 Sgly_3211 3244672 3245946 - enolase COGs: COG0148 Enolase~HAMAP: Enolase~InterPro IPR020811: IPR020810: IPR000941~KEGG: dsy:DSY4838 phosphopyruvate hydratase~PFAM: Enolase%2C C-terminal%3B Enolase%2C N-terminal~PRIAM: Phosphopyruvate hydratase~SPTR: Enolase 2%3B~TIGRFAM: Enolase~PFAM: Enolase%2C N-terminal domain%3B Enolase%2C C-terminal TIM barrel domain~TIGRFAM: phosphopyruvate hydratase gene gene3275 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3211 Sgly_3212 Sgly_3212 Sgly_3212 3245968 3247596 - phosphoglycerate mutase COGs: COG0696 Phosphoglyceromutase~HAMAP: Phosphoglycerate mutase%2C 2%2C3-bisphosphoglycerate-independent~InterPro IPR011258: IPR006124: IPR005995~KEGG: hmo:HM1_1315 phosphoglyceromutase~PFAM: BPG-independent PGAM%2C N-terminal%3B Metalloenzyme~PRIAM: Phosphoglycerate mutase~SPTR: 2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase%3B~TIGRFAM: Phosphoglycerate mutase%2C 2%2C3-bisphosphoglycerate-independent~PFAM: Metalloenzyme superfamily%3B BPG-independent PGAM N-terminus (iPGM_N)~TIGRFAM: 2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase gene gene3276 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3212 Sgly_3213 Sgly_3213 Sgly_3213 3247613 3248368 - triosephosphate isomerase COGs: COG0149 Triosephosphate isomerase~InterPro IPR000652~KEGG: dhd:Dhaf_4717 triose-phosphate isomerase~PFAM: Triosephosphate isomerase~PRIAM: Triose-phosphate isomerase~SPTR: Triosephosphate isomerase%3B~TIGRFAM: Triosephosphate isomerase~manually curated~PFAM: Triosephosphate isomerase~TIGRFAM: triosephosphate isomerase gene gene3277 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3213 Sgly_3214 Sgly_3214 Sgly_3214 3248392 3249576 - phosphoglycerate kinase COGs: COG0126 3-phosphoglycerate kinase~HAMAP: Phosphoglycerate kinase~InterPro IPR001576~KEGG: dhd:Dhaf_4718 phosphoglycerate kinase~PFAM: Phosphoglycerate kinase~PRIAM: Phosphoglycerate kinase~SPTR: Phosphoglycerate kinase%3B~PFAM: Phosphoglycerate kinase gene gene3278 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3214 Sgly_3215 Sgly_3215 Sgly_3215 3249721 3251451 - Na+/Picotransporter COGs: COG1283 Na+/phosphate symporter~InterPro IPR003841~KEGG: mta:Moth_1817 Na/Pi cotransporter II-related~PFAM: Na/Pi-cotransporter~SPTR: Na/Pi cotransporter II-related%3B~PFAM: Na+/Pi-cotransporter~TIGRFAM: Na/Pi-cotransporter gene gene3279 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3215 Sgly_3216 Sgly_3216 Sgly_3216 3251481 3252419 - sporulation transcription regulator whiA COGs: COG1481 conserved hypothetical protein~HAMAP: sporulation transcription regulator whiA~InterPro IPR018478: IPR003802~KEGG: dhd:Dhaf_4720 protein of unknown function DUF199~PFAM: Sporulation regulator WhiA%3B Sporulation regulator WhiA%2C N-terminal~SPTR: Putative sporulation transcription regulator whiA%3B~TIGRFAM: Sporulation regulator WhiA~PFAM: Sporulation Regulator WhiA N terminal%3B Sporulation Regulator WhiA C terminal domain~TIGRFAM: conserved hypothetical protein gene gene3280 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3216 Sgly_3217 Sgly_3217 Sgly_3217 3252461 3253828 - Uncharacterized protein family UPF0052 COGs: COG0391 conserved hypothetical protein~InterPro IPR002882: IPR010119~KEGG: dhd:Dhaf_4721 protein of unknown function UPF0052 and CofD~PFAM: LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Uncharacterised protein family UPF0052~PFAM: Uncharacterised protein family UPF0052~TIGRFAM: conserved hypothetical protein%2C cofD-related gene gene3281 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3217 Sgly_3218 Sgly_3218 Sgly_3218 3253867 3254730 - UPF0042 nucleotide-binding protein yhbJ COGs: COG1660 P-loop-containing kinase~HAMAP: ATPase%2C P-loop-containing~InterPro IPR005337~KEGG: dhd:Dhaf_4722 hypothetical protein~SPTR: UPF0042 nucleotide-binding protein DSY4845%3B~PFAM: P-loop ATPase protein family gene gene3282 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3218 Sgly_3219 Sgly_3219 Sgly_3219 3254769 3255947 - hypothetical protein COGs: COG1653 ABC-type sugar transport system periplasmic component~KEGG: dsy:DSY4846 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3283 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3219 Sgly_3220 Sgly_3220 Sgly_3220 3255977 3257776 - Radical SAM domain protein COGs: COG1032 Fe-S oxidoreductase~InterPro IPR006158: IPR007197: IPR006638~KEGG: dsy:DSY4847 hypothetical protein~PFAM: Radical SAM%3B Cobalamin (vitamin B12)-binding~SMART: Elongator protein 3/MiaB/NifB~SPTR: Putative uncharacterized protein%3B~PFAM: Radical SAM superfamily%3B B12 binding domain gene gene3284 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3220 Sgly_3221 Sgly_3221 Sgly_3221 3257778 3258602 - Cof-like hydrolase COGs: COG0561 hydrolase of the HAD superfamily~InterPro IPR013200: IPR000150: IPR006379~KEGG: dsy:DSY4852 hypothetical protein~PFAM: HAD superfamily hydrolase-like%2C type 3~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Cof protein%3B HAD-superfamily hydrolase%2C subfamily IIB~PFAM: haloacid dehalogenase-like hydrolase~TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily%3B Sucrose-phosphate phosphatase subfamily%3B HAD-superfamily hydrolase%2C subfamily IIB%3B sucrose-phosphate phosphatase-like hydrolase%2C Archaeal gene gene3285 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3221 Sgly_3222 Sgly_3222 Sgly_3222 3258842 3259618 + Peptidoglycan-binding domain 1 protein COGs: COG3409 Putative peptidoglycan-binding domain-containing protein~InterPro IPR002477~KEGG: dsy:DSY1780 hypothetical protein~PFAM: Peptidoglycan binding-like~SPTR: Putative uncharacterized protein%3B~PFAM: Putative peptidoglycan binding domain gene gene3286 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3222 Sgly_3223 Sgly_3223 Sgly_3223 3259762 3260247 - Rubrerythrin COGs: COG1592 Rubrerythrin~InterPro IPR003251: IPR004039~KEGG: tjr:TherJR_1577 rubrerythrin~PFAM: Rubrerythrin%3B Rubredoxin-type Fe(Cys)4 protein~SPTR: Rubrerythrin%3B~PFAM: Rubrerythrin gene gene3287 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3223 Sgly_3224 Sgly_3224 Sgly_3224 3260328 3262121 + GTP-binding proten HflX COGs: COG2262 GTPase~InterPro IPR002917: IPR016496: IPR005225~KEGG: cce:Ccel_0178 GTP-binding proten HflX~PFAM: GTP-binding protein%2C HSR1-related~SPTR: GTP-binding proten HflX%3B~TIGRFAM: GTP-binding protein%2C HflX%3B Small GTP-binding protein~PFAM: GTPase of unknown function~TIGRFAM: GTP-binding protein HflX%3B small GTP-binding protein domain gene gene3288 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3224 Sgly_3225 Sgly_3225 Sgly_3225 3262233 3263051 - adenosylmethionine decarboxylase proenzyme COGs: COG1586 S-adenosylmethionine decarboxylase~HAMAP: S-adenosylmethionine decarboxylase%2C bacterial~InterPro IPR003826: IPR009165~KEGG: hmo:HM1_1062 S-adenosylmethionine decarboxylase~PFAM: S-adenosylmethionine decarboxylase%2C bacterial/archaeal~PRIAM: Adenosylmethionine decarboxylase~SPTR: S-adenosylmethionine decarboxylase proenzyme%3B~TIGRFAM: S-adenosylmethionine decarboxylase%2C bacterial~PFAM: S-adenosylmethionine decarboxylase~TIGRFAM: S-adenosylmethionine decarboxylase proenzyme%2C Escherichia coli form gene gene3289 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3225 Sgly_3226 Sgly_3226 Sgly_3226 3263051 3263152 - hypothetical protein gene gene3290 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3226 Sgly_3227 Sgly_3227 Sgly_3227 3263202 3263663 - Acetyltransferase%2C GNAT family InterPro IPR000182~KEGG: dae:Dtox_2879 GCN5-related N-acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: GCN5-related N-acetyltransferase%3B~PFAM: Acetyltransferase (GNAT) family gene gene3291 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3227 Sgly_3228 Sgly_3228 Sgly_3228 3263695 3264354 - NUDIX hydrolase InterPro IPR000086~KEGG: ant:Arnit_2388 NUDIX hydrolase~PFAM: NUDIX hydrolase domain~SPTR: NUDIX hydrolase%3B~PFAM: NUDIX domain gene gene3292 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3228 Sgly_3229 Sgly_3229 Sgly_3229 3264579 3266165 - citrate lyase%2C alpha subunit COGs: COG3051 Citrate lyase alpha subunit~InterPro IPR006472~KEGG: dsy:DSY3038 hypothetical protein~PFAM: Citrate lyase%2C alpha subunit~PRIAM: Citrate CoA-transferase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Citrate lyase%2C alpha subunit~manually curated~PFAM: Citrate lyase%2C alpha subunit (CitF)~TIGRFAM: citrate lyase%2C alpha subunit gene gene3293 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3229 Sgly_3230 Sgly_3230 Sgly_3230 3266149 3266856 - Citryl-CoA lyase COGs: COG2301 Citrate lyase beta subunit~InterPro IPR005000~KEGG: clj:CLJU_c40570 citrate lyase subunit beta~PFAM: HpcH/HpaI aldolase~PRIAM: Citryl-CoA lyase~SPTR: Citrate lyase beta chain%3B~PFAM: HpcH/HpaI aldolase/citrate lyase family gene gene3294 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3230 Sgly_3231 Sgly_3231 Sgly_3231 3266861 3267160 - citrate lyase acyl carrier protein COGs: COG3052 Citrate lyase gamma subunit~InterPro IPR006495~KEGG: dhd:Dhaf_4208 citrate lyase subunit gamma~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Citrate lyase acyl carrier protein CitD~PFAM: Malonate decarboxylase delta subunit (MdcD)~TIGRFAM: citrate lyase acyl carrier protein gene gene3295 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3231 Sgly_3232 Sgly_3232 Sgly_3232 3267640 3267939 + hypothetical protein KEGG: dhd:Dhaf_1141 hypothetical protein~SPTR: Putative uncharacterized protein%3B~manually curated gene gene3296 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3232 Sgly_3233 Sgly_3233 Sgly_3233 3268080 3268610 - hypothetical protein KEGG: dsy:DSY2533 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3297 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3233 Sgly_3234 Sgly_3234 Sgly_3234 3268781 3269602 - Undecaprenyl-diphosphatase COGs: COG1968 Uncharacterized bacitracin resistance protein~HAMAP: Bacitracin resistance protein BacA~InterPro IPR003824~KEGG: clj:CLJU_c06220 undecaprenyl-diphosphatase~PFAM: Bacitracin resistance protein BacA~SPTR: Undecaprenyl-diphosphatase%3B~TIGRFAM: Bacitracin resistance protein BacA~PFAM: Bacitracin resistance protein BacA~TIGRFAM: undecaprenyl-diphosphatase UppP gene gene3298 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3234 Sgly_3235 Sgly_3235 Sgly_3235 3269629 3270279 - protein of unknown function DUF218 COGs: COG2949 Uncharacterized membrane protein~InterPro IPR003848~KEGG: dae:Dtox_0889 protein of unknown function DUF218~PFAM: Protein of unknown function DUF218~SPTR: Putative uncharacterized protein%3B~PFAM: DUF218 domain gene gene3299 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3235 Sgly_3236 Sgly_3236 Sgly_3236 3270758 3271507 + methionine aminopeptidase%2C type I COGs: COG0024 Methionine aminopeptidase~InterPro IPR000994: IPR002467~KEGG: clj:CLJU_c35780 methionine aminopeptidase~PFAM: Peptidase M24%2C structural domain~PRIAM: Methionyl aminopeptidase~SPTR: Methionine aminopeptidase%3B~TIGRFAM: Peptidase M24A%2C methionine aminopeptidase%2C subfamily 1~PFAM: Metallopeptidase family M24~TIGRFAM: methionine aminopeptidase%2C type I gene gene3300 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3236 Sgly_3237 Sgly_3237 Sgly_3237 3271732 3272088 + hypothetical protein KEGG: nth:Nther_0344 nitrogen regulatory protein P-II~SPTR: PII family protein gene gene3301 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3237 Sgly_3238 Sgly_3238 Sgly_3238 3272263 3273591 + possible tyrosine transporter P-protein COGs: COG1055 Na+/H+ antiporter NhaD and related arsenite permease~InterPro IPR004680~KEGG: bca:BCE_5050 arsenical pump family protein~PFAM: Divalent ion symporter~SPTR: Citrate transporter%3B~PFAM: Citrate transporter%3B (TC 2.A.45.2.1 gene gene3302 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3238 Sgly_3239 Sgly_3239 Sgly_3239 3273592 3273765 - hypothetical protein gene gene3303 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3239 Sgly_3240 Sgly_3240 Sgly_3240 3273879 3274367 + transcriptional regulator%2C CarD family COGs: COG1329 Transcriptional regulators similar to M. xanthus CarD~InterPro IPR003711~KEGG: dsy:DSY2041 hypothetical protein~PFAM: Transcription factor CarD~SPTR: Putative uncharacterized protein%3B~PFAM: CarD-like/TRCF domain gene gene3304 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3240 Sgly_3241 Sgly_3241 Sgly_3241 3274338 3275135 - hypothetical protein KEGG: pic:PICST_40556 riboflavin synthase~SPTR: Riboflavin synthase gene gene3305 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3241 Sgly_3242 Sgly_3242 Sgly_3242 3275163 3276236 - ribosome biogenesis GTPase RsgA COGs: COG1162 GTPase~HAMAP: ribosome biogenesis GTPase RsgA~InterPro IPR004881~KEGG: drm:Dred_0751 ribosome small subunit-dependent GTPase A~PFAM: GTPase EngC~SPTR: Ribosome small subunit-dependent GTPase A%3B~TIGRFAM: GTPase EngC~PFAM: Protein of unknown function%2C DUF258~TIGRFAM: ribosome small subunit-dependent GTPase A gene gene3306 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3242 Sgly_3243 Sgly_3243 Sgly_3243 3276311 3276931 - Carbonate dehydratase COGs: COG0288 Carbonic anhydrase~InterPro IPR001765~KEGG: dhd:Dhaf_2660 carbonate dehydratase~PFAM: Carbonic anhydrase~PRIAM: Carbonate dehydratase~SPTR: Carbonic anhydrase%3B~PFAM: Carbonic anhydrase gene gene3307 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3243 Sgly_3244 Sgly_3244 Sgly_3244 3277304 3280138 - Excinuclease ABC subunit A COGs: COG0178 Excinuclease ATPase subunit~HAMAP: UvrABC system protein A~InterPro IPR003439: IPR004602~KEGG: dsy:DSY4856 hypothetical protein~PFAM: ABC transporter-like~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Excinuclease ABC%2C A subunit~PFAM: ABC transporter~TIGRFAM: excinuclease ABC%2C A subunit gene gene3308 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3244 Sgly_3245 Sgly_3245 Sgly_3245 3280235 3282361 - Excinuclease ABC subunit B COGs: COG0556 Helicase subunit of the DNA excision repair complex~HAMAP: Excinuclease ABC%2C B subunit~InterPro IPR006935: IPR001650: IPR001943: IPR004807: IPR 014001~KEGG: dsy:DSY4858 excinuclease ABC subunit B~PFAM: DNA/RNA helicase%2C C-terminal%3B Restriction endonuclease%2C type I%2C R subunit/Type III%2C Res subunit%3B UvrB/UvrC protein~SMART: DEAD-like helicase%2C N-terminal%3B DNA/RNA helicase%2C C-terminal~SPTR: UvrABC system protein B%3B~TIGRFAM: Excinuclease ABC%2C B subunit~PFAM: Helicase conserved C-terminal domain%3B UvrB/uvrC motif%3B Type III restriction enzyme%2C res subunit%3B Ultra-violet resistance protein B~TIGRFAM: excinuclease ABC%2C B subunit gene gene3309 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3245 Sgly_3246 Sgly_3246 Sgly_3246 3282510 3283526 - hypothetical protein KEGG: dsy:DSY4860 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3310 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3246 Sgly_3247 Sgly_3247 Sgly_3247 3283618 3284802 - C-terminal processing peptidase-3 COGs: COG0793 Periplasmic protease~InterPro IPR001478: IPR005151: IPR004447~KEGG: dhd:Dhaf_4739 carboxyl-terminal protease~PFAM: Peptidase S41%3B PDZ/DHR/GLGF~SMART: Peptidase S41%3B PDZ/DHR/GLGF~SPTR: Carboxyl-terminal protease%3B~TIGRFAM: Peptidase S41A%2C C-terminal peptidase~PFAM: Peptidase family S41%3B PDZ domain (Also known as DHR or GLGF)~TIGRFAM: C-terminal peptidase (prc) gene gene3311 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3247 Sgly_3248 Sgly_3248 Sgly_3248 3284857 3285993 - Peptidase M23 COGs: COG0739 Membrane protein related to metalloendopeptidase~InterPro IPR016047~KEGG: dhd:Dhaf_4740 peptidase M23~PFAM: Peptidase M23~SPTR: Peptidase M23%3B~PFAM: Peptidase family M23 gene gene3312 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3248 Sgly_3249 Sgly_3249 Sgly_3249 3286075 3286959 - protein of unknown function DUF214 COGs: COG2177 Cell division protein~InterPro IPR003838~KEGG: dsy:DSY4864 hypothetical protein~PFAM: Protein of unknown function DUF214%2C permase predicted~SPTR: Putative uncharacterized protein%3B~PFAM: Predicted permease gene gene3313 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3249 Sgly_3250 Sgly_3250 Sgly_3250 3286949 3287635 - cell division ATP-binding protein FtsE COGs: COG2884 ATPase involved in cell division~InterPro IPR003439: IPR003593: IPR005286~KEGG: dhd:Dhaf_4742 cell division ATP-binding protein FtsE~PFAM: ABC transporter-like~PRIAM: Polyamine-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Cell division ATP-binding protein FtsE~PFAM: ABC transporter~TIGRFAM: cell division ATP-binding protein FtsE gene gene3314 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3250 Sgly_3251 Sgly_3251 Sgly_3251 3287781 3288722 - transketolase subunit B COGs: COG3958 Transketolase C-terminal subunit~InterPro IPR005475: IPR005476~KEGG: dhd:Dhaf_4744 transketolase central region~PFAM: Transketolase-like%2C pyrimidine-binding domain%3B Transketolase%2C C-terminal~PRIAM: 1-deoxy-D-xylulose-5-phosphate synthase~SPTR: Transketolase central region%3B~PFAM: Transketolase%2C C-terminal domain%3B Transketolase%2C pyrimidine binding domain gene gene3315 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3251 Sgly_3252 Sgly_3252 Sgly_3252 3288719 3289552 - transketolase subunit A COGs: COG3959 Transketolase N-terminal subunit~InterPro IPR005474~KEGG: dhd:Dhaf_4745 transketolase domain protein~PFAM: Transketolase%2C N-terminal~PRIAM: Transketolase~SPTR: Transketolase domain protein%3B~PFAM: Transketolase%2C thiamine diphosphate binding domain gene gene3316 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3252 Sgly_3253 Sgly_3253 Sgly_3253 3289595 3290711 - bacterial peptide chain release factor 2 (bRF-2) KEGG: dhd:Dhaf_4746 hypothetical protein~SPTR: Peptide chain release factor 2%3B~manually curated~PFAM: PCRF domain%3B RF-1 domain~TIGRFAM: peptide chain release factor 2 gene gene3317 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3253 Sgly_3254 Sgly_3254 Sgly_3254 3291043 3292971 + cell wall binding repeat 2-containing protein COGs: COG2247 Putative cell wall-binding domain~InterPro IPR007253~KEGG: dhd:Dhaf_4160 putative cell wall binding repeat 2-containing protein~PFAM: Putative cell wall binding repeat 2~SPTR: Putative cell wall binding repeat 2-containing protein%3B~PFAM: Putative cell wall binding repeat 2 gene gene3318 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3254 Sgly_3255 Sgly_3255 Sgly_3255 3292982 3293095 - pseudogene gene3319 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3255 Sgly_3256 Sgly_3256 Sgly_3256 3293384 3295435 - cell wall binding repeat 2-containing protein COGs: COG2247 Putative cell wall-binding domain~InterPro IPR007253~KEGG: dhd:Dhaf_1937 putative cell wall binding repeat 2-containing protein~PFAM: Putative cell wall binding repeat 2~SPTR: Putative uncharacterized protein%3B~PFAM: Putative cell wall binding repeat 2 gene gene3320 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3256 Sgly_3257 Sgly_3257 Sgly_3257 3295703 3298207 - protein translocase subunit secA COGs: COG0653 Preprotein translocase subunit SecA (ATPase RNA helicase)~HAMAP: SecA protein~InterPro IPR011115: IPR011130: IPR011116: IPR004027: IPR 000185~KEGG: dhd:Dhaf_4747 preprotein translocase%2C SecA subunit~PFAM: SecA DEAD-like%3B SecA preprotein%2C cross-linking domain%3B SecA Wing/Scaffold%3B SEC-C motif~SPTR: Protein translocase subunit secA%3B~TIGRFAM: SecA protein~PFAM: SecA DEAD-like domain%3B SecA preprotein cross-linking domain%3B SEC-C motif%3B SecA Wing and Scaffold domain~TIGRFAM: preprotein translocase%2C SecA subunit gene gene3321 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3257 Sgly_3258 Sgly_3258 Sgly_3258 3298397 3298942 - SSU ribosomal protein S30P%3Bsigma 54 modulation protein COGs: COG1544 Ribosome-associated protein Y (PSrp-1)~InterPro IPR003489~KEGG: dhd:Dhaf_4748 sigma 54 modulation protein/ribosomal protein S30EA~PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein~PFAM: Sigma 54 modulation protein / S30EA ribosomal protein~TIGRFAM: ribosomal subunit interface protein gene gene3322 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3258 Sgly_3259 Sgly_3259 Sgly_3259 3299239 3299979 - phosphoribosyltransferase COGs: COG1040 amidophosphoribosyltransferase~InterPro IPR000836~KEGG: dhd:Dhaf_4754 phosphoribosyltransferase~PFAM: Phosphoribosyltransferase~SPTR: Phosphoribosyltransferase%3B~PFAM: Phosphoribosyl transferase domain~TIGRFAM: comF family protein gene gene3323 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3259 Sgly_3260 Sgly_3260 Sgly_3260 3299979 3301715 - helicase domain protein COGs: COG4098 Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein)~InterPro IPR006935: IPR001650: IPR014001~KEGG: dhd:Dhaf_4755 helicase domain protein~PFAM: DNA/RNA helicase%2C C-terminal%3B Restriction endonuclease%2C type I%2C R subunit/Type III%2C Res subunit~SMART: DEAD-like helicase%2C N-terminal%3B DNA/RNA helicase%2C C-terminal~SPTR: Helicase domain protein%3B~PFAM: Helicase conserved C-terminal domain%3B DEAD/DEAH box helicase gene gene3324 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3260 Sgly_3261 Sgly_3261 Sgly_3261 3301663 3301965 - hypothetical protein KEGG: hmg:100214120 similar to receptor for egg jelly 5 gene gene3325 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3261 Sgly_3262 Sgly_3262 Sgly_3262 3301985 3303229 - hypothetical protein KEGG: sth:STH2700 O-antigen biosynthesis-related protein~SPTR: O-antigen biosynthesis-related protein gene gene3326 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3262 Sgly_3263 Sgly_3263 Sgly_3263 3303332 3304459 + glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: dhd:Dhaf_4759 glycosyl transferase group 1~PFAM: Glycosyl transferase%2C group 1~SPTR: Glycosyl transferase group 1%3B~PFAM: Glycosyl transferases group 1 gene gene3327 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3263 Sgly_3264 Sgly_3264 Sgly_3264 3304463 3305200 - glycosyl transferase%2C WecB/TagA/CpsF family COGs: COG1922 Teichoic acid biosynthesis protein~InterPro IPR004629~KEGG: dhd:Dhaf_4762 glycosyl transferase%2C WecB/TagA/CpsF family~PFAM: Glycosyl transferase WecB/TagA/CpsF~PRIAM: N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Glycosyl transferase WecB/TagA/CpsF~PFAM: Glycosyl transferase WecB/TagA/CpsF family~TIGRFAM: bacterial polymer biosynthesis proteins%2C WecB/TagA/CpsF family gene gene3328 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3264 Sgly_3265 Sgly_3265 Sgly_3265 3305228 3306262 - rod shape-determining protein MreB COGs: COG1077 Actin-like ATPase involved in cell morphogenesis~InterPro IPR004753~KEGG: dhd:Dhaf_4763 rod shape-determining protein Mbl~PFAM: Cell shape determining protein MreB/Mrl~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Cell shape determining protein MreB/Mrl~PFAM: MreB/Mbl protein~TIGRFAM: cell shape determining protein%2C MreB/Mrl family gene gene3329 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3265 Sgly_3266 Sgly_3266 Sgly_3266 3306433 3306693 - sporulation transcriptional regulator SpoIIID InterPro IPR014208~KEGG: dsy:DSY4887 hypothetical protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Sporulation stage III%2C transcriptional regulator SpoIIID~PFAM: Stage III sporulation protein D~TIGRFAM: sporulation transcriptional regulator SpoIIID gene gene3330 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3266 Sgly_3267 Sgly_3267 Sgly_3267 3306879 3307832 - stage II sporulation protein D COGs: COG2385 Sporulation protein and related protein~InterPro IPR013693: IPR014225: IPR013486~KEGG: dsy:DSY4908 hypothetical protein~PFAM: Sporulation stage II protein D%2C amidase enhancer LytB N-terminal~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Sporulation stage II%2C protein D firmicutes%3B Sporulation stage II protein D%2C amidase enhancer LytB~PFAM: Stage II sporulation protein~TIGRFAM: SpoIID/LytB domain%3B stage II sporulation protein D gene gene3331 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3267 Sgly_3268 Sgly_3268 Sgly_3268 3307927 3309201 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase COGs: COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase~HAMAP: UDP-N-acetylglucosamine 1-carboxyvinyltransferase~InterPro IPR001986: IPR005750~KEGG: dhd:Dhaf_4788 UDP-N-acetylglucosamine 1-carboxyvinyltransferase~PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase%2C core~PRIAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase~PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)~TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase gene gene3332 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3268 Sgly_3269 Sgly_3269 Sgly_3269 3309229 3309903 - hypothetical protein KEGG: dhd:Dhaf_4789 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3333 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3269 Sgly_3270 Sgly_3270 Sgly_3270 3310097 3310507 - ATP synthase F1 subcomplex epsilon subunit COGs: COG0355 F0F1-type ATP synthase epsilon subunit (mitochondrial delta subunit)~HAMAP: ATPase%2C F1 complex%2C delta/epsilon subunit~InterPro IPR020546: IPR020547: IPR001469~KEGG: dhd:Dhaf_4790 F0F1 ATP synthase subunit epsilon~PFAM: ATPase%2C F1 complex%2C delta/epsilon subunit%2C N-terminal%3B ATPase%2C F1 complex%2C delta/epsilon subunit%2C C-terminal~SPTR: ATP synthase epsilon chain%3B~TIGRFAM: ATPase%2C F1 complex%2C delta/epsilon subunit~PFAM: ATP synthase%2C Delta/Epsilon chain%2C beta-sandwich domain%3B ATP synthase%2C Delta/Epsilon chain%2C long alpha-helix domain~TIGRFAM: ATP synthase%2C F1 epsilon subunit (delta in mitochondria) gene gene3334 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3270 Sgly_3271 Sgly_3271 Sgly_3271 3310511 3311914 - ATP synthase F1 subcomplex beta subunit COGs: COG0055 F0F1-type ATP synthase beta subunit~HAMAP: ATPase%2C F1 complex%2C beta subunit~InterPro IPR004100: IPR000194: IPR000793: IPR005722: IPR 003593~KEGG: dhd:Dhaf_4791 F0F1 ATP synthase subunit beta~PFAM: ATPase%2C F1/V1/A1 complex%2C alpha/beta subunit%2C nucleotide-binding domain%3B ATPase%2C F1/V1/A1 complex%2C alpha/beta subunit%2C N-terminal%3B ATPase%2C F1/V1/A1 complex%2C alpha/beta subunit%2C C-terminal~SMART: ATPase%2C AAA+ type%2C core~SPTR: ATP synthase subunit beta%3B~TIGRFAM: ATPase%2C F1 complex%2C beta subunit~PFAM: ATP synthase alpha/beta family%2C beta-barrel domain%3B ATP synthase alpha/beta chain%2C C terminal domain%3B ATP synthase alpha/beta family%2C nucleotide-binding domain~TIGRFAM: ATP synthase%2C F1 beta subunit gene gene3335 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3271 Sgly_3272 Sgly_3272 Sgly_3272 3311954 3312802 - ATP synthase F1 subcomplex gamma subunit COGs: COG0224 F0F1-type ATP synthase gamma subunit~HAMAP: ATP synthase gamma chain~InterPro IPR000131~KEGG: dsy:DSY4913 F0F1 ATP synthase subunit gamma~PFAM: ATPase%2C F1 complex%2C gamma subunit~SPTR: ATP synthase gamma chain%3B~TIGRFAM: ATPase%2C F1 complex%2C gamma subunit~PFAM: ATP synthase~TIGRFAM: ATP synthase%2C F1 gamma subunit gene gene3336 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3272 Sgly_3273 Sgly_3273 Sgly_3273 3312822 3314330 - ATP synthase F1 subcomplex alpha subunit COGs: COG0056 F0F1-type ATP synthase alpha subunit~HAMAP: ATPase%2C F1 complex%2C alpha subunit~InterPro IPR004100: IPR000194: IPR000793: IPR005294~KEGG: dhd:Dhaf_4793 F0F1 ATP synthase subunit alpha~PFAM: ATPase%2C F1/V1/A1 complex%2C alpha/beta subunit%2C nucleotide-binding domain%3B ATPase%2C F1/V1/A1 complex%2C alpha/beta subunit%2C N-terminal%3B ATPase%2C F1/V1/A1 complex%2C alpha/beta subunit%2C C-terminal~SPTR: ATP synthase subunit alpha%3B~TIGRFAM: ATPase%2C F1 complex%2C alpha subunit~PFAM: ATP synthase alpha/beta family%2C beta-barrel domain%3B ATP synthase alpha/beta family%2C nucleotide-binding domain%3B ATP synthase alpha/beta chain%2C C terminal domain~TIGRFAM: proton translocating ATP synthase%2C F1 alpha subunit gene gene3337 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3273 Sgly_3274 Sgly_3274 Sgly_3274 3314335 3314904 - ATP synthase subunit delta COGs: COG0712 F0F1-type ATP synthase delta subunit (mitochondrial oligomycin sensitivity protein)~HAMAP: ATPase%2C F1 complex%2C OSCP/delta subunit~InterPro IPR000711~KEGG: dhd:Dhaf_4794 F0F1 ATP synthase subunit delta~PFAM: ATPase%2C F1 complex%2C OSCP/delta subunit~SPTR: ATP synthase subunit delta%3B~TIGRFAM: ATPase%2C F1 complex%2C OSCP/delta subunit~PFAM: ATP synthase delta (OSCP) subunit~TIGRFAM: ATP synthase%2C F1 delta subunit gene gene3338 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3274 Sgly_3275 Sgly_3275 Sgly_3275 3314898 3315455 - ATP synthase F0 subcomplex B subunit COGs: COG0711 F0F1-type ATP synthase subunit b~HAMAP: ATP synthase subunit b~InterPro IPR002146: IPR005864~KEGG: dhd:Dhaf_4795 ATP synthase F0%2C B subunit~PFAM: ATPase%2C F0 complex%2C subunit B/B'%2C bacterial/chloroplast~SPTR: ATP synthase subunit b%3B~TIGRFAM: ATPase%2C F0 complex%2C subunit B%2C bacterial~PFAM: ATP synthase B/B' CF(0)~TIGRFAM: ATP synthase%2C F0 subunit b gene gene3339 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3275 Sgly_3276 Sgly_3276 Sgly_3276 3315514 3315744 - ATP synthase F0 subcomplex C subunit HAMAP: ATPase%2C F0 complex%2C subunit C~InterPro IPR002379: IPR000454: IPR005953~KEGG: dhd:Dhaf_4796 ATP synthase F0%2C C subunit~PFAM: ATPase%2C F0/V0 complex%2C subunit C~SPTR: ATP synthase subunit c%3B~TIGRFAM: ATPase%2C F0 complex%2C subunit C%2C bacterial/chloroplast~PFAM: ATP synthase subunit C~TIGRFAM: ATP synthase%2C F0 subunit c gene gene3340 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3276 Sgly_3277 Sgly_3277 Sgly_3277 3315830 3316570 - ATP synthase F0 subcomplex A subunit COGs: COG0356 F0F1-type ATP synthase subunit a~HAMAP: ATP synthase subunit a~InterPro IPR000568~KEGG: dsy:DSY4918 ATP synthase F0 A subunit~PFAM: ATPase%2C F0 complex%2C subunit A~SPTR: ATP synthase subunit a%3B~TIGRFAM: ATPase%2C F0 complex%2C subunit A~PFAM: ATP synthase A chain~TIGRFAM: ATP synthase subunit 6 (eukaryotes)%2Calso subunit A (prokaryotes) gene gene3341 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3277 Sgly_3278 Sgly_3278 Sgly_3278 3316578 3316931 - ATP synthase I KEGG: dhd:Dhaf_4798 ATP synthase I~SPTR: ATP synthase I gene gene3342 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3278 Sgly_3279 Sgly_3279 Sgly_3279 3316921 3317157 - hypothetical protein KEGG: dhd:Dhaf_4799 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Putative F0F1-ATPase subunit (ATPase_gene1) gene gene3343 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3279 Sgly_3280 Sgly_3280 Sgly_3280 3317330 3318472 - UDP-N-Acetylglucosamine 2-epimerase COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase~InterPro IPR003331~KEGG: dhd:Dhaf_4822 UDP-N-acetylglucosamine 2-epimerase~PFAM: UDP-N-acetylglucosamine 2-epimerase~PRIAM: UDP-N-acetylglucosamine 2-epimerase~SPTR: UDP-N-acetylglucosamine 2-epimerase%3B~TIGRFAM: UDP-N-acetylglucosamine 2-epimerase~PFAM: UDP-N-acetylglucosamine 2-epimerase~TIGRFAM: UDP-N-acetylglucosamine 2-epimerase gene gene3344 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3280 Sgly_3281 Sgly_3281 Sgly_3281 3318543 3318989 - CMP/dCMP deaminase zinc-binding protein COGs: COG2131 Deoxycytidylate deaminase~InterPro IPR002125~KEGG: dbr:Deba_2384 CMP/dCMP deaminase zinc-binding protein~PFAM: CMP/dCMP deaminase%2C zinc-binding~SPTR: CMP/dCMP deaminase zinc-binding%3B~PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region gene gene3345 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3281 Sgly_3282 Sgly_3282 Sgly_3282 3319120 3319542 - hemerythrin HHE cation binding domain protein KEGG: dhd:Dhaf_1009 hemerythrin HHE cation binding domain protein~SPTR: Hemerythrin HHE cation binding domain protein gene gene3346 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3282 Sgly_3283 Sgly_3283 Sgly_3283 3319571 3320830 - serine hydroxymethyltransferase COGs: COG0112 Glycine/serine hydroxymethyltransferase~InterPro IPR001085~KEGG: dsy:DSY4927 serine hydroxymethyltransferase~PFAM: Serine hydroxymethyltransferase~PRIAM: Glycine hydroxymethyltransferase~SPTR: Serine hydroxymethyltransferase%3B~PFAM: Serine hydroxymethyltransferase gene gene3347 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3283 Sgly_3284 Sgly_3284 Sgly_3284 3320915 3321355 - ribose-5-phosphate isomerase COGs: COG0698 Ribose 5-phosphate isomerase RpiB~InterPro IPR003500: IPR004785~KEGG: dsy:DSY4929 hypothetical protein~PFAM: Ribose/galactose isomerase~PRIAM: Galactose-6-phosphate isomerase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Ribose/galactose isomerase%3B Ribose 5-phosphate isomerase B~PFAM: Ribose/Galactose Isomerase~TIGRFAM: ribose 5-phosphate isomerase B%3B sugar-phosphate isomerases%2C RpiB/LacA/LacB family gene gene3348 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3284 Sgly_3285 Sgly_3285 Sgly_3285 3321355 3321807 - protein tyrosine phosphatase COGs: COG0394 Protein-tyrosine-phosphatase~InterPro IPR017867~KEGG: dhd:Dhaf_4829 protein tyrosine phosphatase~PFAM: Protein-tyrosine phosphatase%2C low molecular weight~SMART: Protein-tyrosine phosphatase%2C low molecular weight~SPTR: Protein tyrosine phosphatase%3B~PFAM: Low molecular weight phosphotyrosine protein phosphatase gene gene3349 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3285 Sgly_3286 Sgly_3286 Sgly_3286 3321844 3322413 - UPF0059 membrane protein yebN COGs: COG1971 membrane protein~HAMAP: UPF0059 membrane protein yebN~InterPro IPR003810~KEGG: pth:PTH_2827 hypothetical protein~PFAM: Protein of unknown function DUF204~SPTR: UPF0059 membrane protein PTH_2827%3B~PFAM: Domain of unknown function DUF gene gene3350 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3286 Sgly_3287 Sgly_3287 Sgly_3287 3322465 3323571 - translation factor SUA5 COGs: COG0009 Putative translation factor (SUA5)~InterPro IPR006070: IPR005145: IPR004388~KEGG: dsy:DSY4932 hypothetical protein~PFAM: Sua5/YciO/YrdC%2C N-terminal%3B SUA5~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Sua5/YciO/YrdC/YwlC~PFAM: yrdC domain%3B SUA5 domain~TIGRFAM: Sua5/YciO/YrdC/YwlC family protein gene gene3351 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3287 Sgly_3288 Sgly_3288 Sgly_3288 3323577 3324440 - protein-(glutamine-N5) methyltransferase%2C release factor-specific COGs: COG2890 Methylase of polypeptide chain release factors~InterPro IPR007848: IPR004556: IPR019874~KEGG: dhd:Dhaf_4832 modification methylase%2C HemK family~PFAM: Methyltransferase small~PRIAM: Site-specific DNA-methyltransferase (adenine-specific)~SPTR: Modification methylase%2C HemK family%3B~TIGRFAM: Protein-(glutamine-N5) methyltransferase%2C release factor-specific%3B Modification methylase HemK~PFAM: Methyltransferase small domain~TIGRFAM: protein-(glutamine-N5) methyltransferase%2C ribosomal protein L3-specific%3B HemK family putative methylases%3B HemK-related putative methylase%3B protein-(glutamine-N5) methyltransferase%2C release factor-specific gene gene3352 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3288 Sgly_3289 Sgly_3289 Sgly_3289 3324457 3325527 - bacterial peptide chain release factor 1 (bRF-1) COGs: COG0216 Protein chain release factor A~HAMAP: Peptide chain release factor 1~InterPro IPR005139: IPR000352: IPR004373~KEGG: dsy:DSY4934 peptide chain release factor 1~PFAM: Class I peptide chain release factor%3B Peptide chain release factor~SPTR: Peptide chain release factor 1%3B~TIGRFAM: Peptide chain release factor 1~PFAM: PCRF domain%3B RF-1 domain~TIGRFAM: peptide chain release factor 1 gene gene3353 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3289 Sgly_3290 Sgly_3290 Sgly_3290 3325543 3326421 - protein of unknown function DUF1385 COGs: COG3872 metal-dependent protein~InterPro IPR010787~KEGG: dae:Dtox_0063 protein of unknown function DUF1385~PFAM: Protein of unknown function DUF1385~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1385) gene gene3354 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3290 Sgly_3291 Sgly_3291 Sgly_3291 3326503 3326703 - LSU ribosomal protein L31P COGs: COG0254 Ribosomal protein L31~HAMAP: 50S ribosomal protein L31~InterPro IPR002150~KEGG: dhd:Dhaf_4835 50S ribosomal protein L31~PFAM: Ribosomal protein L31~SPTR: 50S ribosomal protein L31%3B~TIGRFAM: Ribosomal protein L31~manually curated~PFAM: Ribosomal protein L31~TIGRFAM: ribosomal protein L31 gene gene3355 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3291 Sgly_3292 Sgly_3292 Sgly_3292 3326812 3327786 - fructose-1%2C6-bisphosphatase%2C class II COGs: COG1494 Fructose-1 6-bisphosphatase/sedoheptulose 1 7-bisphosphatase and related protein~InterPro IPR004464~KEGG: dhd:Dhaf_4837 fructose 1%2C6-bisphosphatase II~PFAM: GlpX~PRIAM: Fructose-bisphosphatase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: GlpX~PFAM: Bacterial fructose-1%2C6-bisphosphatase%2C glpX-encoded~TIGRFAM: fructose-1%2C6-bisphosphatase%2C class II gene gene3356 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3292 Sgly_3293 Sgly_3293 Sgly_3293 3327867 3328505 - transaldolase COGs: COG0176 Transaldolase~HAMAP: transaldolase~InterPro IPR001585: IPR004731~KEGG: dhd:Dhaf_4838 transaldolase~PFAM: Transaldolase~SPTR: Probable transaldolase%3B~TIGRFAM: Transaldolase C~PFAM: Transaldolase~TIGRFAM: fructose-6-phosphate aldolase%2C TalC/MipB family gene gene3357 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3293 Sgly_3294 Sgly_3294 Sgly_3294 3328576 3329430 - fructose-bisphosphate aldolase COGs: COG0191 Fructose/tagatose bisphosphate aldolase~InterPro IPR000771: IPR011289~KEGG: dhd:Dhaf_4839 fructose-1%2C6-bisphosphate aldolase~PFAM: Ketose-bisphosphate aldolase%2C class-II~PRIAM: Tagatose-bisphosphate aldolase~SPTR: Fructose-1%2C6-bisphosphate aldolase%2C class II%3B~TIGRFAM: Fructose-1%2C6-bisphosphate aldolase%2C class II%3B Ketose-bisphosphate aldolase%2C class-II~PFAM: Fructose-bisphosphate aldolase class-II~TIGRFAM: ketose-bisphosphate aldolases%3B fructose-1%2C6-bisphosphate aldolase%2C class II%2C various bacterial and amitochondriate protist gene gene3358 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3294 Sgly_3295 Sgly_3295 Sgly_3295 3329450 3330130 - hypothetical protein KEGG: dhd:Dhaf_4840 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3359 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3295 Sgly_3296 Sgly_3296 Sgly_3296 3330208 3330579 - response regulator receiver protein COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains~InterPro IPR001789~KEGG: dsy:DSY4941 hypothetical protein~PFAM: Signal transduction response regulator%2C receiver domain~SMART: Signal transduction response regulator%2C receiver domain~SPTR: Putative uncharacterized protein%3B~PFAM: Response regulator receiver domain gene gene3360 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3296 Sgly_3297 Sgly_3297 Sgly_3297 3330585 3331808 - Alanine racemase COGs: COG0787 Alanine racemase~HAMAP: Alanine racemase~InterPro IPR001608: IPR011079: IPR000821~KEGG: dsy:DSY4942 hypothetical protein~PFAM: Alanine racemase%2C N-terminal%3B Alanine racemase%2C C-terminal~PRIAM: Alanine racemase~SPTR: Alanine racemase%3B~TIGRFAM: Alanine racemase~PFAM: Alanine racemase%2C C-terminal domain%3B Alanine racemase%2C N-terminal domain~TIGRFAM: alanine racemase gene gene3361 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3297 Sgly_3298 Sgly_3298 Sgly_3298 3331808 3332884 - Methicillin resistance protein COGs: COG2348 Uncharacterized protein involved in methicillin resistance~InterPro IPR003447~KEGG: dhd:Dhaf_4843 methicillin resistance protein~PFAM: Methicillin resistance protein~SPTR: Methicillin resistance protein%3B~PFAM: FemAB family gene gene3362 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3298 Sgly_3299 Sgly_3299 Sgly_3299 3332967 3334580 - CTP synthase COGs: COG0504 CTP synthase (UTP-ammonia lyase)~HAMAP: CTP synthase~InterPro IPR017456: IPR000991: IPR004468~KEGG: dhd:Dhaf_4844 CTP synthetase~PFAM: CTP synthase%2C N-terminal%3B Glutamine amidotransferase class-I%2C C-terminal~PRIAM: CTP synthase~SPTR: CTP synthase%3B~TIGRFAM: CTP synthase~PFAM: Glutamine amidotransferase class-I%3B CTP synthase N-terminus~TIGRFAM: CTP synthase gene gene3363 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3299 Sgly_3300 Sgly_3300 Sgly_3300 3334628 3336313 - arginyl-tRNA synthetase COGs: COG0018 Arginyl-tRNA synthetase~HAMAP: Arginyl-tRNA synthetase%2C class Ic~InterPro IPR005148: IPR015945: IPR008909: IPR001278~KEGG: dhd:Dhaf_4846 arginyl-tRNA synthetase~PFAM: Arginyl-tRNA synthetase%2C class Ic%2C core%3B Arginyl tRNA synthetase%2C class Ic%2C N-terminal%3B DALR anticodon binding~PRIAM: Arginine--tRNA ligase~SPTR: Arginyl-tRNA synthetase%3B~TIGRFAM: Arginyl-tRNA synthetase%2C class Ic~PFAM: DALR anticodon binding domain%3B Arginyl tRNA synthetase N terminal domain%3B tRNA synthetases class I (R)~TIGRFAM: arginyl-tRNA synthetase gene gene3364 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3300 Sgly_3301 Sgly_3301 Sgly_3301 3336487 3337926 - Propeptide PepSY amd peptidase M4 InterPro IPR005075~KEGG: dhd:Dhaf_4848 propeptide PepSY amd peptidase M4~PFAM: Peptidase M4%2C propeptide%2C PepSY~SPTR: Putative uncharacterized protein%3B~TIGRFAM: germination protein YpeB gene gene3365 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3301 Sgly_3302 Sgly_3302 Sgly_3302 3337938 3338642 - spore cortex-lytic enzyme COGs: COG3773 Cell wall hydrolyses involved in spore germination~InterPro IPR002477: IPR011105: IPR014224~KEGG: dhd:Dhaf_4849 spore cortex-lytic enzyme~PFAM: Cell wall hydrolase%2C SleB%3B Peptidoglycan binding-like~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Spore cortex-lytic enzyme SleB~PFAM: Putative peptidoglycan binding domain%3B Cell Wall Hydrolase~TIGRFAM: spore cortex-lytic enzyme gene gene3366 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3302 Sgly_3303 Sgly_3303 Sgly_3303 3338872 3340047 - Alanine--glyoxylate transaminase COGs: COG0075 Serine-pyruvate aminotransferase/ aspartate aminotransferase~InterPro IPR000192~KEGG: dhd:Dhaf_4850 alanine--glyoxylate transaminase~PFAM: Aminotransferase%2C class V/Cysteine desulfurase~PRIAM: Alanine--glyoxylate transaminase~SPTR: Putative uncharacterized protein%3B~PFAM: Aminotransferase class-V gene gene3367 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3303 Sgly_3304 Sgly_3304 Sgly_3304 3340175 3340900 - Protein of unknown function DUF2225 COGs: COG1655 conserved hypothetical protein~InterPro IPR018708: IPR019734~KEGG: afl:Aflv_2407 hypothetical protein~PFAM: Protein of unknown function DUF2225~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterized protein conserved in bacteria (DUF2225) gene gene3368 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3304 Sgly_3305 Sgly_3305 Sgly_3305 3340933 3342084 - rRNA (guanine-N(2)-)-methyltransferase COGs: COG0116 N6-adenine-specific DNA methylase~InterPro IPR004114: IPR000241~KEGG: dsy:DSY2076 hypothetical protein~PFAM: Putative RNA methylase%3B THUMP~PRIAM: rRNA (guanine-N(2)-)-methyltransferase~SPTR: Putative uncharacterized protein%3B~PFAM: Putative RNA methylase family UPF0020%3B THUMP domain gene gene3369 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3305 Sgly_3306 Sgly_3306 Sgly_3306 3342420 3342794 + response regulator receiver protein COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains~InterPro IPR001789~KEGG: ade:Adeh_0776 response regulator receiver domain-containing protein~PFAM: Signal transduction response regulator%2C receiver domain~SMART: Signal transduction response regulator%2C receiver domain~SPTR: Response regulator receiver domain protein (CheY-like)%3B~PFAM: Response regulator receiver domain gene gene3370 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3306 Sgly_3307 Sgly_3307 Sgly_3307 3342997 3344073 - diguanylate cyclase COGs: COG2199 FOG: GGDEF domain~InterPro IPR000160~KEGG: ddf:DEFDS_0866 hypothetical protein~PFAM: Diguanylate cyclase%2C predicted~SMART: Diguanylate cyclase%2C predicted~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Diguanylate cyclase%2C predicted~PFAM: GGDEF domain~TIGRFAM: diguanylate cyclase (GGDEF) domain gene gene3371 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3307 Sgly_3308 Sgly_3308 Sgly_3308 3344316 3345398 + C4-dicarboxylate transporter/malic acid transport protein COGs: COG1275 Tellurite resistance protein and related permease~InterPro IPR004695~KEGG: dhd:Dhaf_0897 C4-dicarboxylate transporter/malic acid transport protein~PFAM: C4-dicarboxylate transporter/malic acid transport protein~SPTR: C4-dicarboxylate transporter/malic acid transport protein%3B~PFAM: C4-dicarboxylate transporter/malic acid transport protein~TIGRFAM: C4-dicarboxylate transporter/malic acid transport protein gene gene3372 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3308 Sgly_3309 Sgly_3309 Sgly_3309 3345506 3345880 + CrcB-like protein COGs: COG0239 Integral membrane protein possibly involved in chromosome condensation~HAMAP: Camphor resistance CrcB protein~InterPro IPR003691~KEGG: aca:ACP_3316 CrcB protein~PFAM: Camphor resistance CrcB protein~SPTR: Protein crcB homolog%3B~TIGRFAM: Camphor resistance CrcB protein~PFAM: CrcB-like protein~TIGRFAM: crcB protein gene gene3373 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3309 Sgly_3310 Sgly_3310 Sgly_3310 3345944 3347119 - UPF0272 protein COGs: COG1641 conserved hypothetical protein~HAMAP: UPF0272 protein~InterPro IPR002822~KEGG: ckr:CKR_0284 hypothetical protein~PFAM: Protein of unknown function DUF111~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Protein of unknown function DUF111~PFAM: Protein of unknown function DUF111~TIGRFAM: conserved hypothetical protein TIGR00299 gene gene3374 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3310 Sgly_3311 Sgly_3311 Sgly_3311 3347150 3349273 - diguanylate cyclase and metal dependent phosphohydrolase COGs: COG2206 HD-GYP domain~InterPro IPR013656: IPR000160: IPR006674: IPR000014~KEGG: pth:PTH_2004 hypothetical protein~PFAM: Diguanylate cyclase%2C predicted%3B PAS fold-4%3B Metal-dependent phosphohydrolase%2C HD subdomain~SMART: Diguanylate cyclase%2C predicted~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Diguanylate cyclase%2C predicted%3B PAS~PFAM: HD domain%3B GGDEF domain%3B PAS fold~TIGRFAM: PAS domain S-box%3B diguanylate cyclase (GGDEF) domain gene gene3375 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3311 Sgly_3312 Sgly_3312 Sgly_3312 3349584 3350276 - protein of unknown function UPF0016 COGs: COG2119 membrane protein~InterPro IPR001727~KEGG: hmo:HM1_0223 hypothetical membrane protein~PFAM: Uncharacterised protein family UPF0016~SPTR: Hypothetical membrane protein%3B~PFAM: Uncharacterized protein family UPF0016 gene gene3376 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3312 Sgly_3313 Sgly_3313 Sgly_3313 3350529 3351590 - Alcohol dehydrogenase (NADP(+)) COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase~InterPro IPR013154: IPR013149~KEGG: abu:Abu_1042 NADP-dependent alcohol dehydrogenase~PFAM: Alcohol dehydrogenase%2C zinc-binding%3B Alcohol dehydrogenase GroES-like~PRIAM: Alcohol dehydrogenase (NADP(+))~SPTR: Alcohol dehydrogenase zinc-binding domain protein%3B~PFAM: Alcohol dehydrogenase GroES-like domain%3B Zinc-binding dehydrogenase gene gene3377 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3313 Sgly_3314 Sgly_3314 Sgly_3314 3351885 3352562 - Deoxyribose-phosphate aldolase COGs: COG0274 Deoxyribose-phosphate aldolase~HAMAP: Deoxyribose-phosphate aldolase~InterPro IPR002915: IPR011343~KEGG: smd:Smed_2469 deoxyribose-phosphate aldolase~PFAM: Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase~PRIAM: Deoxyribose-phosphate aldolase~SPTR: Deoxyribose-phosphate aldolase%3B~TIGRFAM: Deoxyribose-phosphate aldolase~PFAM: DeoC/LacD family aldolase~TIGRFAM: deoxyribose-phosphate aldolase gene gene3378 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3314 Sgly_3315 Sgly_3315 Sgly_3315 3352578 3353297 - transcriptional regulator%2C GntR family COGs: COG2188 Transcriptional regulators~InterPro IPR000524: IPR011663~KEGG: gct:GC56T3_1227 transcriptional regulator%2C GntR family~PFAM: UbiC transcription regulator-associated%3B HTH transcriptional regulator%2C GntR~SMART: HTH transcriptional regulator%2C GntR~SPTR: Transcriptional regulator%2C GntR family%3B~PFAM: Bacterial regulatory proteins%2C gntR family%3B UTRA domain gene gene3379 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3315 Sgly_3316 Sgly_3316 Sgly_3316 3353396 3353878 - Ribosomal RNA large subunit methyltransferase H COGs: COG1576 conserved hypothetical protein~HAMAP: SPOUT methyltransferase%2C predicted~InterPro IPR003742: IPR016051~KEGG: dsy:DSY5015 rRNA large subunit methyltransferase~PFAM: SPOUT methyltransferase%2C predicted~SPTR: Ribosomal RNA large subunit methyltransferase H%3B~TIGRFAM: Conserved hypothetical protein CHP00246~PFAM: Predicted SPOUT methyltransferase~TIGRFAM: rRNA large subunit m3Psi methyltransferase RlmH gene gene3380 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3316 Sgly_3317 Sgly_3317 Sgly_3317 3353949 3355208 - metal dependent phosphohydrolase COGs: COG2206 HD-GYP domain~InterPro IPR006674: IPR003607: IPR006675~KEGG: dsy:DSY3225 hypothetical protein~PFAM: Metal-dependent phosphohydrolase%2C HD subdomain~SMART: Metal-dependent phosphohydrolase%2C HD domain~SPTR: Putative uncharacterized protein%3B~TIGRFAM: HDIG~PFAM: HD domain~TIGRFAM: uncharacterized domain HDIG gene gene3381 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3317 Sgly_3318 Sgly_3318 Sgly_3318 3355408 3355626 + small acid-soluble spore protein alpha/beta type InterPro IPR001448~KEGG: cce:Ccel_1444 small acid-soluble spore protein alpha/beta type~PFAM: Small acid-soluble spore protein%2C alpha/beta-type~SPTR: Small acid-soluble spore protein alpha/beta type%3B~PFAM: Small%2C acid-soluble spore proteins%2C alpha/beta type gene gene3382 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3318 Sgly_3319 Sgly_3319 Sgly_3319 3355718 3359965 - CoA-substrate-specific enzyme activase COGs: COG3580 conserved hypothetical protein~InterPro IPR002731: IPR018709: IPR008275~KEGG: cth:Cthe_1329 putative CoA-substrate-specific enzyme activase~PFAM: Protein of unknown function DUF2229%2C CoA enzyme activase%3B ATPase%2C BadF/BadG/BcrA/BcrD type~SPTR: CoA-substrate-specific enzyme activase%3B~TIGRFAM: CoA enzyme activase~PFAM: 2-hydroxyglutaryl-CoA dehydratase%2C D-component%3B BadF/BadG/BcrA/BcrD ATPase family%3B CoA enzyme activase uncharacterised domain (DUF2229)~TIGRFAM: CoA-substrate-specific enzyme activase%2C putative gene gene3383 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3319 Sgly_3320 Sgly_3320 Sgly_3320 3360266 3361417 - peptidase S1 and S6 chymotrypsin/Hap COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain~InterPro IPR001254: IPR001478~KEGG: dhd:Dhaf_4915 2-alkenal reductase~PFAM: Peptidase S1/S6%2C chymotrypsin/Hap%3B PDZ/DHR/GLGF~SMART: PDZ/DHR/GLGF~SPTR: Putative uncharacterized protein%3B~PFAM: Trypsin%3B PDZ domain (Also known as DHR or GLGF) gene gene3384 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3320 Sgly_3321 Sgly_3321 Sgly_3321 3361443 3362231 - hypothetical protein COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I~KEGG: dsy:DSY5017 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Metallo-beta-lactamase superfamily gene gene3385 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3321 Sgly_3322 Sgly_3322 Sgly_3322 3362413 3364428 - Trimethylamine-N-oxide reductase (cytochrome c) COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing~InterPro IPR006963: IPR006656: IPR006657~KEGG: dsy:DSY5019 putative anaerobic dehydrogenase~PFAM: Molybdopterin oxidoreductase%3B Molybdopterin oxidoreductase%2C Fe4S4 domain%3B Molydopterin dinucleotide-binding domain~PRIAM: Trimethylamine-N-oxide reductase (cytochrome c)~SPTR: Putative anaerobic dehydrogenase%3B~PFAM: Molybdopterin oxidoreductase%3B Molydopterin dinucleotide binding domain%3B Molybdopterin oxidoreductase Fe4S4 domain gene gene3386 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3322 Sgly_3323 Sgly_3323 Sgly_3323 3364441 3365913 - Radical SAM domain protein COGs: COG0641 Arylsulfatase regulator (Fe-S oxidoreductase)~InterPro IPR007197~KEGG: dhd:Dhaf_4919 radical SAM domain protein~PFAM: Radical SAM~SPTR: Putative uncharacterized protein%3B~PFAM: Radical SAM superfamily gene gene3387 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3323 Sgly_3324 Sgly_3324 Sgly_3324 3366095 3366235 - hypothetical protein KEGG: dhd:Dhaf_4920 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3388 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3324 Sgly_3325 Sgly_3325 Sgly_3325 3366251 3366826 - hypothetical protein KEGG: dhd:Dhaf_4921 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3389 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3325 Sgly_3326 Sgly_3326 Sgly_3326 3367540 3368298 - Phosphonate-transporting ATPase COGs: COG1122 ABC-type cobalt transport system ATPase component~InterPro IPR003439: IPR003593~KEGG: cth:Cthe_1801 ABC transporter related protein~PFAM: ABC transporter-like~PRIAM: Phosphonate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related protein%3B~PFAM: ABC transporter~TIGRFAM: cobalt transport protein ATP-binding subunit gene gene3393 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3326 Sgly_3327 Sgly_3327 Sgly_3327 3368299 3369108 - cobalt ABC transporter%2C inner membrane subunit CbiQ COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter~InterPro IPR003339: IPR012809~KEGG: cth:Cthe_1802 cobalt ABC transporter%2C inner membrane subunit CbiQ~PFAM: Cobalt transport protein~SPTR: Cobalt ABC transporter%2C inner membrane subunit CbiQ%3B~TIGRFAM: Cobalt ABC transporter CbiQ%2C permease subunit~PFAM: Cobalt transport protein~TIGRFAM: cobalt ABC transporter%2C permease protein CbiQ gene gene3394 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3327 Sgly_3328 Sgly_3328 Sgly_3328 3369172 3370227 - cobalamin (vitamin B12) biosynthesis CbiM protein COGs: COG0310 ABC-type Co2+ transport system permease component~InterPro IPR002751~KEGG: cbt:CLH_1576 cobalamin~PFAM: Cobalamin (vitamin B12) biosynthesis CbiM~SPTR: Cobalamin%3B~PFAM: Cobalt uptake substrate-specific transmembrane region~TIGRFAM: cobalamin biosynthesis protein CbiM gene gene3395 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3328 Sgly_3329 Sgly_3329 Sgly_3329 3370404 3371036 - tRNA (guanine-N(7)-)-methyltransferase COGs: COG0220 S-adenosylmethionine-dependent methyltransferase~HAMAP: tRNA (guanine-N-7) methyltransferase~InterPro IPR003358~KEGG: dhd:Dhaf_3167 tRNA (guanine-N(7)-)-methyltransferase~PFAM: tRNA (guanine-N-7) methyltransferase~SPTR: tRNA (guanine-N(7)-)-methyltransferase%3B~TIGRFAM: tRNA (guanine-N-7) methyltransferase~PFAM: Putative methyltransferase~TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase gene gene3396 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3329 Sgly_3330 Sgly_3330 Sgly_3330 3371258 3372856 + Prenyltransferase/squalene oxidase InterPro IPR001330~KEGG: dhd:Dhaf_4682 hypothetical protein~PFAM: Prenyltransferase/squalene oxidase~SPTR: Putative uncharacterized protein gene gene3397 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3330 Sgly_3331 Sgly_3331 Sgly_3331 3372884 3373759 + ABC transporter related protein COGs: COG1131 ABC-type multidrug transport system ATPase component~InterPro IPR003439: IPR003593~KEGG: dhd:Dhaf_2171 ABC transporter related~PFAM: ABC transporter-like~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related%3B~PFAM: ABC transporter gene gene3398 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3331 Sgly_3332 Sgly_3332 Sgly_3332 3373796 3374605 + hypothetical protein KEGG: dsy:DSY1092 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3399 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3332 Sgly_3333 Sgly_3333 Sgly_3333 3374630 3375256 - two component transcriptional regulator%2C LuxR family COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain~InterPro IPR001789: IPR000792~KEGG: amt:Amet_4202 two component LuxR family transcriptional regulator~PFAM: Signal transduction response regulator%2C receiver domain%3B Transcription regulator LuxR%2C C-terminal~SMART: Signal transduction response regulator%2C receiver domain%3B Transcription regulator LuxR%2C C-terminal~SPTR: Two component transcriptional regulator%2C LuxR family%3B~PFAM: Response regulator receiver domain%3B Bacterial regulatory proteins%2C luxR family gene gene3400 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3333 Sgly_3334 Sgly_3334 Sgly_3334 3375257 3376339 - integral membrane sensor signal transduction histidine kinase COGs: COG4585 Signal transduction histidine kinase~InterPro IPR011712: IPR003594~KEGG: amt:Amet_4203 integral membrane sensor signal transduction histidine kinase~PFAM: Signal transduction histidine kinase%2C subgroup 3%2C dimerisation and phosphoacceptor domain%3B ATPase-like%2C ATP-binding domain~SMART: ATPase-like%2C ATP-binding domain~SPTR: Integral membrane sensor signal transduction histidine kinase%3B~PFAM: Histidine kinase%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase gene gene3401 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3334 Sgly_3335 Sgly_3335 Sgly_3335 3376445 3377179 - glycosyl transferase family 2 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis~InterPro IPR001173~KEGG: bca:BCE_3442 glycosyl transferase%2C group 2 family protein~PFAM: Glycosyl transferase%2C family 2~SPTR: Glycosyl transferase%2C group 2%3B~PFAM: Glycosyl transferase family 2 gene gene3402 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3335 Sgly_3336 Sgly_3336 Sgly_3336 3377265 3377399 - pseudogene gene3403 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3336 Sgly_3337 Sgly_3337 Sgly_3337 3377420 3378517 - ABC-2 type transporter InterPro IPR013525~KEGG: cno:NT01CX_1312 ABC transporter%2C permease protein%2C putative~PFAM: ABC-2 type transporter~SPTR: ABC transporter%2C permease protein%2C putative%3B~PFAM: ABC-2 type transporter gene gene3404 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3337 Sgly_3338 Sgly_3338 Sgly_3338 3378514 3379638 - hypothetical protein KEGG: amt:Amet_4205 ABC-2 type transporter~SPTR: ABC-2 type transporter gene gene3405 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3338 Sgly_3339 Sgly_3339 Sgly_3339 3379652 3380815 - Fe(3+)-transporting ATPase COGs: COG1131 ABC-type multidrug transport system ATPase component~InterPro IPR003439: IPR003593~KEGG: amt:Amet_4206 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Fe(3+)-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related%3B~PFAM: ABC transporter gene gene3406 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3339 Sgly_3340 Sgly_3340 Sgly_3340 3380812 3381300 - pyridoxamine 5'-phosphate oxidase-related%2C FMN-binding protein KEGG: maq:Maqu_2925 pyridoxamine 5'-phosphate oxidase-related%2C FMN-binding~SPTR: Pyridoxamine 5'-phosphate oxidase-related%2C FMN-binding%3B~PFAM: Pyridoxamine 5'-phosphate oxidase gene gene3407 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3340 Sgly_3341 Sgly_3341 Sgly_3341 3381300 3381833 - hypothetical protein KEGG: gdj:Gdia_1063 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3408 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3341 Sgly_3342 Sgly_3342 Sgly_3342 3381827 3383179 - cell division membrane protein-like protein COGs: COG0772 Bacterial cell division membrane protein~KEGG: dhd:Dhaf_0962 cell division membrane protein-like protein~SPTR: Cell division membrane protein-like protein%3B~PFAM: Cell cycle protein gene gene3409 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3342 Sgly_3343 Sgly_3343 Sgly_3343 3383166 3383510 - transcriptional regulator%2C PadR family COGs: COG1695 transcriptional regulator protein~InterPro IPR005149~KEGG: dsy:DSY4371 hypothetical protein~PFAM: Transcription regulator PadR N-terminal-like~SPTR: Putative uncharacterized protein%3B~PFAM: Transcriptional regulator PadR-like family gene gene3410 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3343 Sgly_3344 Sgly_3344 Sgly_3344 3384067 3385353 - Adenylosuccinate synthetase COGs: COG0104 Adenylosuccinate synthase~HAMAP: Adenylosuccinate synthetase~InterPro IPR001114~KEGG: chy:CHY_2670 adenylosuccinate synthetase~PFAM: Adenylosuccinate synthetase~PRIAM: Adenylosuccinate synthase~SMART: Adenylosuccinate synthetase~SPTR: Adenylosuccinate synthetase%3B~TIGRFAM: Adenylosuccinate synthetase~PFAM: Adenylosuccinate synthetase~TIGRFAM: adenylosuccinate synthase gene gene3412 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3344 Sgly_3345 Sgly_3345 Sgly_3345 3385511 3386836 - primary replicative DNA helicase COGs: COG0305 Replicative DNA helicase~InterPro IPR007693: IPR007694: IPR003593: IPR007692~KEGG: dhd:Dhaf_4929 replicative DNA helicase~PFAM: DNA helicase%2C DnaB-like%2C C-terminal%3B DNA helicase%2C DnaB-like%2C N-terminal~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~TIGRFAM: DNA helicase%2C DnaB type~PFAM: DnaB-like helicase N terminal domain%3B DnaB-like helicase C terminal domain~TIGRFAM: replicative DNA helicase gene gene3413 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3345 Sgly_3346 Sgly_3346 Sgly_3346 3386918 3388840 - Sigma 54 interacting domain protein COGs: COG1067 ATP-dependent protease~InterPro IPR003959: IPR003593: IPR014252~KEGG: dhd:Dhaf_4930 sigma 54 interacting domain protein~PFAM: ATPase%2C AAA-type%2C core~PRIAM: Endopeptidase La~SMART: ATPase%2C AAA+ type%2C core~SPTR: Sigma 54 interacting domain protein%3B~TIGRFAM: Sporulation protease LonC~PFAM: ATPase family associated with various cellular activities (AAA)%3B Lon protease (S16) C-terminal proteolytic domain~TIGRFAM: lon-related putative ATP-dependent protease%3B ATP-dependent protease%2C Lon family gene gene3414 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3346 Sgly_3347 Sgly_3347 Sgly_3347 3388848 3389294 - LSU ribosomal protein L9P COGs: COG0359 Ribosomal protein L9~HAMAP: Ribosomal protein L9%2C bacteria/chloroplast~InterPro IPR020070: IPR020069: IPR020594~KEGG: dhd:Dhaf_4931 50S ribosomal protein L9~PFAM: Ribosomal protein L9%2C C-terminal%3B Ribosomal protein L9%2C N-terminal~SPTR: 50S ribosomal protein L9%3B~TIGRFAM: Ribosomal protein L9%2C bacteria/chloroplast~PFAM: Ribosomal protein L9%2C N-terminal domain%3B Ribosomal protein L9%2C C-terminal domain~TIGRFAM: ribosomal protein L9 gene gene3415 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3347 Sgly_3348 Sgly_3348 Sgly_3348 3389291 3390256 - Protein of unknown function DUF2232%2C membrane InterPro IPR018710~KEGG: dhd:Dhaf_4932 hypothetical protein~PFAM: Protein of unknown function DUF2232%2C membrane~SPTR: Putative uncharacterized protein%3B~PFAM: Predicted membrane protein (DUF2232) gene gene3416 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3348 Sgly_3349 Sgly_3349 Sgly_3349 3390269 3390586 - hypothetical protein KEGG: dhd:Dhaf_4933 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3417 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3349 Sgly_3350 Sgly_3350 Sgly_3350 3390701 3390946 - SSU ribosomal protein S18P COGs: COG0238 Ribosomal protein S18~HAMAP: Ribosomal protein S18~InterPro IPR001648~KEGG: dhd:Dhaf_4934 30S ribosomal protein S18~PFAM: Ribosomal protein S18~SPTR: 30S ribosomal protein S18%3B~TIGRFAM: Ribosomal protein S18~PFAM: Ribosomal protein S18~TIGRFAM: ribosomal protein S18 gene gene3418 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3350 Sgly_3351 Sgly_3351 Sgly_3351 3390995 3391399 - single-strand binding protein COGs: COG0629 Single-stranded DNA-binding protein~InterPro IPR000424: IPR011344~KEGG: dhd:Dhaf_4935 single-strand binding protein~PFAM: Primosome PriB/single-strand DNA-binding~SPTR: Single-stranded DNA-binding protein%3B~TIGRFAM: Single-strand DNA-binding~PFAM: Single-strand binding protein family~TIGRFAM: single stranded DNA-binding protein (ssb) gene gene3419 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3351 Sgly_3352 Sgly_3352 Sgly_3352 3391415 3391699 - SSU ribosomal protein S6P COGs: COG0360 Ribosomal protein S6~HAMAP: Ribosomal protein S6%2C bacterial-like~InterPro IPR020814: IPR000529~KEGG: dhd:Dhaf_4936 30S ribosomal protein S6~PFAM: Ribosomal protein S6%2C bacterial-like~SPTR: 30S ribosomal protein S6%3B~TIGRFAM: Ribosomal protein S6~PFAM: Ribosomal protein S6~TIGRFAM: ribosomal protein S6 gene gene3420 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3352 Sgly_3353 Sgly_3353 Sgly_3353 3391807 3392907 - GTP-binding protein YchF COGs: COG0012 GTPase probable translation factor~InterPro IPR002917: IPR013029: IPR004396~KEGG: dhd:Dhaf_4937 GTP-dependent nucleic acid-binding protein EngD~PFAM: Protein of unknown function DUF933%3B GTP-binding protein%2C HSR1-related~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Conserved hypothetical protein CHP00092~PFAM: GTPase of unknown function%3B Protein of unknown function (DUF933)~TIGRFAM: GTP-binding protein YchF gene gene3421 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3353 Sgly_3354 Sgly_3354 Sgly_3354 3393012 3393221 - protein of unknown function DUF951 COGs: COG4481 conserved hypothetical protein~InterPro IPR009296~KEGG: dhd:Dhaf_4938 protein of unknown function DUF951~PFAM: Protein of unknown function DUF951%2C bacterial~SPTR: Putative uncharacterized protein%3B~PFAM: Bacterial protein of unknown function (DUF951) gene gene3422 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3354 Sgly_3355 Sgly_3355 Sgly_3355 3393247 3393918 - hypothetical protein KEGG: dhd:Dhaf_4939 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Colicin V production protein gene gene3423 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3355 Sgly_3356 Sgly_3356 Sgly_3356 3394002 3395186 - Extracellular ligand-binding receptor COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component~InterPro IPR001828~KEGG: gka:GK2980 branched chain amino acid ABC transporter (substrate-binding protein)~PFAM: Extracellular ligand-binding receptor~SPTR: Extracellular ligand-binding receptor%3B~PFAM: Receptor family ligand binding region gene gene3424 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3356 Sgly_3357 Sgly_3357 Sgly_3357 3395327 3395572 + hypothetical protein KEGG: vpr:Vpar_0344 hypothetical protein~SPTR: Hypothetical cytosolic protein%3B~PFAM: Protein of unknown function (DUF3343) gene gene3425 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3357 Sgly_3358 Sgly_3358 Sgly_3358 3395569 3396777 + cysteine desulfurase family protein COGs: COG0520 Selenocysteine lyase~InterPro IPR000192: IPR010969~KEGG: vpr:Vpar_0342 cysteine desulfurase family protein~PFAM: Aminotransferase%2C class V/Cysteine desulfurase~PRIAM: Cysteine desulfurase~SPTR: Cysteine desulfurase family protein%3B~TIGRFAM: Cysteine desulfurase-related%2C unknown function~PFAM: Aminotransferase class-V~TIGRFAM: cysteine desulfurase family protein gene gene3426 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3358 Sgly_3359 Sgly_3359 Sgly_3359 3397159 3397719 + sporulation protein YyaC InterPro IPR009665~KEGG: dhd:Dhaf_4946 sporulation protein YyaC~PFAM: Protein of unknown function DUF1256~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Protein of unknown function DUF1256~PFAM: Protein of unknown function (DUF1256)~TIGRFAM: putative sporulation protein YyaC gene gene3427 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3359 Sgly_3360 Sgly_3360 Sgly_3360 3397720 3398220 - hypothetical protein KEGG: dhd:Dhaf_4951 hypothetical protein~SPTR: Putative uncharacterized protein gene gene3428 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3360 Sgly_3361 Sgly_3361 Sgly_3361 3398286 3399173 - chromosome segregation DNA-binding protein COGs: COG1475 transcriptional regulator protein~InterPro IPR003115: IPR004437~KEGG: dhd:Dhaf_4953 ParB-like partition protein~PFAM: ParB-like nuclease~SMART: ParB-like nuclease~SPTR: ParB-like partition protein%3B~TIGRFAM: ParB-like partition protein~PFAM: ParB-like nuclease domain~TIGRFAM: ParB-like partition proteins gene gene3429 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3361 Sgly_3362 Sgly_3362 Sgly_3362 3399166 3399927 - chromosome segregation ATPase COGs: COG1192 ATPase involved in chromosome partitioning~KEGG: dsy:DSY5052 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain gene gene3430 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3362 Sgly_3363 Sgly_3363 Sgly_3363 3400099 3400854 - Ribosomal RNA small subunit methyltransferase G COGs: COG0357 S-adenosylmethionine-dependent methyltransferase involved in cell division~HAMAP: rRNA small subunit methyltransferase G~InterPro IPR003682~KEGG: dhd:Dhaf_4955 methyltransferase GidB~PFAM: rRNA small subunit methyltransferase G~SPTR: Ribosomal RNA small subunit methyltransferase G%3B~TIGRFAM: rRNA small subunit methyltransferase G~PFAM: rRNA small subunit methyltransferase G~TIGRFAM: 16S rRNA methyltransferase GidB gene gene3431 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3363 Sgly_3364 Sgly_3364 Sgly_3364 3400847 3402766 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG COGs: COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division~HAMAP: Glucose-inhibited division protein A~InterPro IPR002218: IPR004416~KEGG: dsy:DSY5054 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA~PFAM: Glucose-inhibited division protein A-related~SPTR: tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG%3B~TIGRFAM: Glucose-inhibited division protein A~PFAM: Glucose inhibited division protein A~TIGRFAM: glucose-inhibited division protein A gene gene3432 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3364 Sgly_3365 Sgly_3365 Sgly_3365 3402776 3404176 - tRNA modification GTPase trmE COGs: COG0486 GTPase~HAMAP: tRNA modification GTPase TrmE~InterPro IPR018948: IPR002917: IPR004520: IPR005225~KEGG: dsy:DSY5055 hypothetical protein~PFAM: GTP-binding protein TrmE%2C N-terminal%3B GTP-binding protein%2C HSR1-related~SPTR: tRNA modification GTPase mnmE%3B~TIGRFAM: tRNA modification GTPase TrmE%3B Small GTP-binding protein~PFAM: GTPase of unknown function%3B GTP-binding protein TrmE N-terminus~TIGRFAM: small GTP-binding protein domain%3B tRNA modification GTPase TrmE gene gene3433 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3365 Sgly_3366 Sgly_3366 Sgly_3366 3404222 3404965 - single-stranded nucleic acid binding R3H domain-containing protein COGs: COG1847 RNA-binding protein~InterPro IPR001374~KEGG: dhd:Dhaf_4958 single-stranded nucleic acid binding R3H domain protein~PFAM: Single-stranded nucleic acid binding R3H~SMART: Single-stranded nucleic acid binding R3H~SPTR: Putative uncharacterized protein%3B~PFAM: R3H domain gene gene3434 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3366 Sgly_3367 Sgly_3367 Sgly_3367 3404995 3405687 - membrane protein insertase%2C YidC/Oxa1 family COGs: COG0706 Preprotein translocase subunit YidC~InterPro IPR001708: IPR020001~KEGG: dhd:Dhaf_4959 60 kDa inner membrane insertion protein~PFAM: Membrane insertion protein%2C OxaA/YidC~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Membrane insertion protein%2C OxaA/YidC%2C core~PFAM: 60Kd inner membrane protein~TIGRFAM: membrane protein insertase%2C YidC/Oxa1 family%2C C-terminal domain gene gene3435 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3367 Sgly_3368 Sgly_3368 Sgly_3368 3405699 3405923 - UPF0161 protein yidD COGs: COG0759 conserved hypothetical protein~HAMAP: Protein of unknown function DUF37~InterPro IPR002696~KEGG: dsy:DSY5058 hypothetical protein~PFAM: Protein of unknown function DUF37~SPTR: UPF0161 protein DSY5058%3B~TIGRFAM: Protein of unknown function DUF37~PFAM: Domain of unknown function DUF37~TIGRFAM: conserved hypothetical protein YidD gene gene3436 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3368 Sgly_3369 Sgly_3369 Sgly_3369 3405913 3406293 - Ribonuclease P protein component COGs: COG0594 RNase P protein component~HAMAP: Ribonuclease P~InterPro IPR000100~KEGG: dsy:DSY5059 ribonuclease P protein component~PFAM: Ribonuclease P~SPTR: Ribonuclease P protein component%3B~TIGRFAM: Ribonuclease P~PFAM: Ribonuclease P~TIGRFAM: ribonuclease P protein component%2C eubacterial gene gene3437 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3369 Sgly_3370 Sgly_3370 Sgly_3370 3406305 3406439 - LSU ribosomal protein L34P HAMAP: 50S ribosomal protein L34~InterPro IPR000271~KEGG: drm:Dred_3329 50S ribosomal protein L34~PFAM: Ribosomal protein L34~SPTR: 50S ribosomal protein L34%3B~TIGRFAM: Ribosomal protein L34~manually curated~PFAM: Ribosomal protein L34~TIGRFAM: ribosomal protein L34%2C bacterial type gene gene3438 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_3370 Sgly_R0001 Sgly_R0001 Sgly_R0001 11448 11536 + tRNA-Ser tRNA gene9 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0001 Sgly_R0002 Sgly_R0002 Sgly_R0002 11611 11689 + tRNA-Arg tRNA gene10 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0002 Sgly_R0003 Sgly_R0003 Sgly_R0003 12329 12420 + tRNA-Ser tRNA gene12 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0003 Sgly_R0004 Sgly_R0004 Sgly_R0004 16704 16792 + tRNA-Ser tRNA gene18 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0004 Sgly_R0005 Sgly_R0005 Sgly_R0005 152722 152815 + tRNA-Ser tRNA gene153 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0005 Sgly_R0006 Sgly_R0006 Sgly_R0006 168444 168555 + RNA component of signal recognition particle gene gene165 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0006 Sgly_R0007 Sgly_R0007 Sgly_R0007 239229 240782 + 16S ribosomal RNA rRNA gene233 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0007 Sgly_R0008 Sgly_R0008 Sgly_R0008 240924 240999 + tRNA-Ala tRNA gene234 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0008 Sgly_R0009 Sgly_R0009 Sgly_R0009 241206 244243 + 23S ribosomal RNA rRNA gene235 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0009 Sgly_R0010 Sgly_R0010 Sgly_R0010 244355 244459 + 5S ribosomal RNA rRNA gene236 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0010 Sgly_R0011 Sgly_R0011 Sgly_R0011 252397 252472 + tRNA-Val tRNA gene245 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0011 Sgly_R0012 Sgly_R0012 Sgly_R0012 252478 252553 + tRNA-Asp tRNA gene246 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0012 Sgly_R0013 Sgly_R0013 Sgly_R0013 252557 252632 + tRNA-Phe tRNA gene247 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0013 Sgly_R0014 Sgly_R0014 Sgly_R0014 252642 252716 + tRNA-Gly tRNA gene248 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0014 Sgly_R0015 Sgly_R0015 Sgly_R0015 252727 252801 + tRNA-Cys tRNA gene249 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0015 Sgly_R0016 Sgly_R0016 Sgly_R0016 252808 252896 + tRNA-Leu tRNA gene250 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0016 Sgly_R0017 Sgly_R0017 Sgly_R0017 252904 252980 + tRNA-Val tRNA gene251 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0017 Sgly_R0018 Sgly_R0018 Sgly_R0018 286007 287560 + 16S ribosomal RNA rRNA gene280 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0018 Sgly_R0019 Sgly_R0019 Sgly_R0019 287702 287778 + tRNA-Ile tRNA gene281 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0019 Sgly_R0020 Sgly_R0020 Sgly_R0020 287796 287871 + tRNA-Ala tRNA gene282 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0020 Sgly_R0021 Sgly_R0021 Sgly_R0021 288090 291127 + 23S ribosomal RNA rRNA gene283 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0021 Sgly_R0022 Sgly_R0022 Sgly_R0022 291239 291343 + 5S ribosomal RNA rRNA gene284 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0022 Sgly_R0023 Sgly_R0023 Sgly_R0023 337115 337190 + tRNA-Thr tRNA gene329 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0023 Sgly_R0024 Sgly_R0024 Sgly_R0024 337201 337284 + tRNA-Tyr tRNA gene330 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0024 Sgly_R0025 Sgly_R0025 Sgly_R0025 337300 337374 + tRNA-Met tRNA gene331 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0025 Sgly_R0026 Sgly_R0026 Sgly_R0026 480352 480426 - tRNA-Thr tRNA gene505 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0026 Sgly_R0027 Sgly_R0027 Sgly_R0027 1270979 1271054 + tRNA-Ala tRNA gene1291 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0027 Sgly_R0028 Sgly_R0028 Sgly_R0028 1728087 1728164 - tRNA-Pro tRNA gene1729 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0028 Sgly_R0029 Sgly_R0029 Sgly_R0029 1745452 1745538 + tRNA-Leu tRNA gene1749 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0029 Sgly_R0030 Sgly_R0030 Sgly_R0030 1774487 1774573 + tRNA-Leu tRNA gene1779 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0030 Sgly_R0031 Sgly_R0031 Sgly_R0031 1824341 1824417 + tRNA-Pro tRNA gene1826 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0031 Sgly_R0032 Sgly_R0032 Sgly_R0032 2061475 2061548 + tRNA-Trp tRNA gene2073 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0032 Sgly_R0033 Sgly_R0033 Sgly_R0033 2097288 2097363 + tRNA-Arg tRNA gene2112 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0033 Sgly_R0034 Sgly_R0034 Sgly_R0034 2161035 2161139 - 5S ribosomal RNA rRNA gene2178 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0034 Sgly_R0035 Sgly_R0035 Sgly_R0035 2161251 2164288 - 23S ribosomal RNA rRNA gene2179 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0035 Sgly_R0036 Sgly_R0036 Sgly_R0036 2164507 2164582 - tRNA-Ala tRNA gene2180 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0036 Sgly_R0037 Sgly_R0037 Sgly_R0037 2164600 2164676 - tRNA-Ile tRNA gene2181 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0037 Sgly_R0038 Sgly_R0038 Sgly_R0038 2164818 2166371 - 16S ribosomal RNA rRNA gene2182 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0038 Sgly_R0039 Sgly_R0039 Sgly_R0039 2250899 2251003 - 5S ribosomal RNA rRNA gene2258 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0039 Sgly_R0040 Sgly_R0040 Sgly_R0040 2251115 2254152 - 23S ribosomal RNA rRNA gene2259 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0040 Sgly_R0041 Sgly_R0041 Sgly_R0041 2254359 2254434 - tRNA-Ala tRNA gene2260 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0041 Sgly_R0042 Sgly_R0042 Sgly_R0042 2254576 2256128 - 16S ribosomal RNA rRNA gene2261 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0042 Sgly_R0043 Sgly_R0043 Sgly_R0043 2269585 2269658 - tRNA-Gly tRNA gene2273 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0043 Sgly_R0044 Sgly_R0044 Sgly_R0044 2269665 2269741 - tRNA-Met tRNA gene2274 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0044 Sgly_R0045 Sgly_R0045 Sgly_R0045 2269743 2269817 - tRNA-Asn tRNA gene2275 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0045 Sgly_R0046 Sgly_R0046 Sgly_R0046 2269825 2269915 - tRNA-Ser tRNA gene2276 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0046 Sgly_R0047 Sgly_R0047 Sgly_R0047 2269939 2270023 - tRNA-Leu tRNA gene2277 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0047 Sgly_R0048 Sgly_R0048 Sgly_R0048 2270035 2270110 - tRNA-Thr tRNA gene2278 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0048 Sgly_R0049 Sgly_R0049 Sgly_R0049 2270126 2270202 - tRNA-Arg tRNA gene2279 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0049 Sgly_R0050 Sgly_R0050 Sgly_R0050 2270218 2270292 - tRNA-Gly tRNA gene2280 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0050 Sgly_R0051 Sgly_R0051 Sgly_R0051 2270302 2270377 - tRNA-Lys tRNA gene2281 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0051 Sgly_R0052 Sgly_R0052 Sgly_R0052 2270402 2270477 - tRNA-Lys tRNA gene2282 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0052 Sgly_R0053 Sgly_R0053 Sgly_R0053 2270489 2270564 - tRNA-Gln tRNA gene2283 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0053 Sgly_R0054 Sgly_R0054 Sgly_R0054 2270669 2270744 - tRNA-Asp tRNA gene2284 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0054 Sgly_R0055 Sgly_R0055 Sgly_R0055 2270797 2270872 - tRNA-Val tRNA gene2285 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0055 Sgly_R0056 Sgly_R0056 Sgly_R0056 2270879 2270954 - tRNA-Glu tRNA gene2286 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0056 Sgly_R0057 Sgly_R0057 Sgly_R0057 2440100 2440455 - RNA component of RNaseP Bacterial RNase P class A as predicted by Rfam (RF00010)%2C score 287.46 gene gene2453 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0057 Sgly_R0058 Sgly_R0058 Sgly_R0058 2442973 2443047 - tRNA-Met tRNA gene2456 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0058 Sgly_R0059 Sgly_R0059 Sgly_R0059 2443056 2443130 - tRNA-Asn tRNA gene2457 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0059 Sgly_R0060 Sgly_R0060 Sgly_R0060 2543255 2543337 + tRNA-Leu tRNA gene2555 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0060 Sgly_R0061 Sgly_R0061 Sgly_R0061 2560001 2560074 - tRNA-Gln tRNA gene2576 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0061 Sgly_R0062 Sgly_R0062 Sgly_R0062 2591965 2592040 - tRNA-His tRNA gene2607 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0062 Sgly_R0063 Sgly_R0063 Sgly_R0063 2592050 2592126 - tRNA-Arg tRNA gene2608 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0063 Sgly_R0064 Sgly_R0064 Sgly_R0064 2614052 2614128 - tRNA-Pro tRNA gene2633 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0064 Sgly_R0065 Sgly_R0065 Sgly_R0065 3119097 3119277 + 6S RNA 6S / SsrS RNA as predicted by Rfam (RF00013)%2C score 62.75 ncRNA gene3130 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0065 Sgly_R0066 Sgly_R0066 Sgly_R0066 3237493 3237798 - DNA polymerase beta domain protein region InterPro IPR002934~KEGG: dhd:Dhaf_0347 DNA polymerase beta domain protein region~PFAM: Nucleotidyltransferase~SPTR: DNA polymerase beta domain protein region%3B~tmRNA as predicted by Rfam (RF00023)%2C score 182.33~PFAM: Nucleotidyltransferase domain gene gene3268 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0066 Sgly_R0067 Sgly_R0067 Sgly_R0067 3366922 3366996 - tRNA-Gly tRNA gene3390 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0067 Sgly_R0068 Sgly_R0068 Sgly_R0068 3367284 3367359 - tRNA-Phe tRNA gene3391 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0068 Sgly_R0069 Sgly_R0069 Sgly_R0069 3367364 3367439 - tRNA-Glu tRNA gene3392 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0069 Sgly_R0070 Sgly_R0070 Sgly_R0070 3383870 3383945 - tRNA-Lys tRNA gene3411 http://www.ncbi.nlm.nih.gov/gene/?term=Sgly_R0070