locus-tag class description Swol_0001 PF11638 DnaA N-terminal domain Swol_0001 PF08299 Bacterial dnaA protein helix-turn-helix Swol_0001 PF00308 Bacterial dnaA protein Swol_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain Swol_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain Swol_0002 PF02767 DNA polymerase III beta subunit, central domain Swol_0003 PF02463 RecF/RecN/SMC N terminal domain Swol_0005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_0005 PF01751 Toprim domain Swol_0005 PF00204 DNA gyrase B Swol_0005 PF00986 DNA gyrase B subunit, carboxyl terminus Swol_0006 PF03989 DNA gyrase C-terminal domain, beta-propeller Swol_0006 PF00521 DNA gyrase/topoisomerase IV, subunit A Swol_0007 PF01680 SOR/SNZ family Swol_0008 PF00266 Aminotransferase class-V Swol_0009 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Swol_0009 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Swol_0009 PF01842 ACT domain Swol_0010 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Swol_0010 PF02403 Seryl-tRNA synthetase N-terminal domain Swol_0011 PF00072 Response regulator receiver domain Swol_0013 PF14437 MafB19-like deaminase Swol_0014 PF02646 RmuC family Swol_0023 PF01695 IstB-like ATP binding protein Swol_0026 PF17932 Tetracyclin repressor-like, C-terminal domain Swol_0026 PF00440 Bacterial regulatory proteins, tetR family Swol_0028 PF02926 THUMP domain Swol_0028 PF01170 Putative RNA methylase family UPF0020 Swol_0030 PF12169 DNA polymerase III subunits gamma and tau domain III Swol_0031 PF02575 YbaB/EbfC DNA-binding family Swol_0032 PF13662 Toprim domain Swol_0032 PF02132 RecR protein Swol_0032 PF00633 Helix-hairpin-helix motif Swol_0039 PF01276 Orn/Lys/Arg decarboxylase, major domain Swol_0039 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Swol_0040 PF02223 Thymidylate kinase Swol_0042 PF09115 DNA polymerase III, delta subunit, C terminal Swol_0043 PF04468 PSP1 C-terminal conserved region Swol_0044 PF06156 Initiation control protein YabA Swol_0045 PF05175 Methyltransferase small domain Swol_0046 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Swol_0047 PF18277 AbrB C-terminal domain Swol_0047 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Swol_0049 PF08264 Anticodon-binding domain of tRNA Swol_0049 PF09334 tRNA synthetases class I (M) Swol_0049 PF01588 Putative tRNA binding domain Swol_0050 PF01026 TatD related DNase Swol_0051 PF06725 3D domain Swol_0051 PF03990 G5-linked-Ubiquitin-like domain Swol_0051 PF07501 G5 domain Swol_0053 PF00398 Ribosomal RNA adenine dimethylase Swol_0054 PF04308 Ribonuclease H-like Swol_0055 PF06257 Biofilm formation stimulator VEG Swol_0062 PF01734 Patatin-like phospholipase Swol_0063 PF09551 Stage II sporulation protein R (spore_II_R) Swol_0064 PF08544 GHMP kinases C terminal Swol_0064 PF00288 GHMP kinases N terminal domain Swol_0065 PF07729 FCD domain Swol_0065 PF00392 Bacterial regulatory proteins, gntR family Swol_0067 PF12804 MobA-like NTP transferase domain Swol_0067 PF00132 Bacterial transferase hexapeptide (six repeats) Swol_0068 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Swol_0068 PF14572 Phosphoribosyl synthetase-associated domain Swol_0069 PF01386 Ribosomal L25p family Swol_0069 PF14693 Ribosomal protein TL5, C-terminal domain Swol_0070 PF01195 Peptidyl-tRNA hydrolase Swol_0073 PF02559 CarD-like/TRCF domain Swol_0073 PF00270 DEAD/DEAH box helicase Swol_0073 PF00271 Helicase conserved C-terminal domain Swol_0073 PF03461 TRCF domain Swol_0073 PF17757 UvrB interaction domain Swol_0078 PF03323 Bacillus/Clostridium GerA spore germination protein Swol_0080 PF15714 Stage V sporulation protein T C-terminal, transcription factor Swol_0080 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Swol_0081 PF14667 Polysaccharide biosynthesis C-terminal domain Swol_0081 PF01943 Polysaccharide biosynthesis protein Swol_0082 PF03819 MazG nucleotide pyrophosphohydrolase domain Swol_0083 PF00216 Bacterial DNA-binding protein Swol_0084 PF01479 S4 domain Swol_0089 PF00575 S1 RNA binding domain Swol_0090 PF02541 Ppx/GppA phosphatase family Swol_0090 PF01761 3-dehydroquinate synthase Swol_0091 PF01226 Formate/nitrite transporter Swol_0093 PF07228 Stage II sporulation protein E (SpoIIE) Swol_0094 PF01171 PP-loop family Swol_0094 PF11734 TilS substrate C-terminal domain Swol_0095 PF01434 Peptidase family M41 Swol_0095 PF06480 FtsH Extracellular Swol_0095 PF00004 ATPase family associated with various cellular activities (AAA) Swol_0095 PF17862 AAA+ lid domain Swol_0096 PF01909 Nucleotidyltransferase domain Swol_0096 PF01966 HD domain Swol_0096 PF08335 GlnD PII-uridylyltransferase Swol_0097 PF00809 Pterin binding enzyme Swol_0098 PF02152 Dihydroneopterin aldolase Swol_0099 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Swol_0101 PF02548 Ketopantoate hydroxymethyltransferase Swol_0102 PF02569 Pantoate-beta-alanine ligase Swol_0103 PF02261 Aspartate decarboxylase Swol_0104 PF02445 Quinolinate synthetase A protein Swol_0105 PF00890 FAD binding domain Swol_0105 PF02910 Fumarate reductase flavoprotein C-term Swol_0107 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Swol_0107 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Swol_0108 PF02632 BioY family Swol_0109 PF03309 Type III pantothenate kinase Swol_0110 PF01207 Dihydrouridine synthase (Dus) Swol_0115 PF01272 Transcription elongation factor, GreA/GreB, C-term Swol_0115 PF03449 Transcription elongation factor, N-terminal Swol_0116 PF01336 OB-fold nucleic acid binding domain Swol_0116 PF00152 tRNA synthetases class II (D, K and N) Swol_0117 PF03062 MBOAT, membrane-bound O-acyltransferase family Swol_0122 PF03023 Lipid II flippase MurJ Swol_0124 PF00953 Glycosyl transferase family 4 Swol_0125 PF03816 Cell envelope-related transcriptional attenuator domain Swol_0126 PF01520 N-acetylmuramoyl-L-alanine amidase Swol_0126 PF01520 N-acetylmuramoyl-L-alanine amidase Swol_0126 PF08239 Bacterial SH3 domain Swol_0126 PF08239 Bacterial SH3 domain Swol_0128 PF02719 Polysaccharide biosynthesis protein Swol_0132 PF04542 Sigma-70 region 2 Swol_0132 PF08281 Sigma-70, region 4 Swol_0146 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Swol_0146 PF01348 Type II intron maturase Swol_0147 PF04754 Putative transposase, YhgA-like Swol_0149 PF03354 Phage Terminase Swol_0154 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Swol_0154 PF01348 Type II intron maturase Swol_0155 PF00872 Transposase, Mutator family Swol_0158 PF01966 HD domain Swol_0160 PF03543 Yersinia/Haemophilus virulence surface antigen Swol_0160 PF05860 haemagglutination activity domain Swol_0160 PF13332 Hemagglutinin repeat Swol_0160 PF02661 Fic/DOC family Swol_0160 PF13018 Extended Signal Peptide of Type V secretion system Swol_0162 PF00082 Subtilase family Swol_0166 PF01348 Type II intron maturase Swol_0166 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Swol_0168 PF03572 Peptidase family S41 Swol_0168 PF00595 PDZ domain Swol_0173 PF17874 MalT-like TPR region Swol_0173 PF00196 Bacterial regulatory proteins, luxR family Swol_0176 PF00873 AcrB/AcrD/AcrF family Swol_0178 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Swol_0178 PF01348 Type II intron maturase Swol_0180 PF00005 ABC transporter Swol_0184 PF02350 UDP-N-acetylglucosamine 2-epimerase Swol_0185 PF07730 Histidine kinase Swol_0185 PF05384 Sensor protein DegS Swol_0185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_0186 PF00196 Bacterial regulatory proteins, luxR family Swol_0186 PF00072 Response regulator receiver domain Swol_0188 PF00156 Phosphoribosyl transferase domain Swol_0192 PF07196 Flagellin hook IN motif Swol_0192 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Swol_0192 PF07196 Flagellin hook IN motif Swol_0192 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Swol_0193 PF00700 Bacterial flagellin C-terminal helical region Swol_0193 PF00669 Bacterial flagellin N-terminal helical region Swol_0195 PF02623 FliW protein Swol_0196 PF02599 Global regulator protein family Swol_0197 PF07195 Flagellar hook-associated protein 2 C-terminus Swol_0197 PF07195 Flagellar hook-associated protein 2 C-terminus Swol_0197 PF02465 Flagellar hook-associated protein 2 N-terminus Swol_0197 PF02465 Flagellar hook-associated protein 2 N-terminus Swol_0198 PF00700 Bacterial flagellin C-terminal helical region Swol_0198 PF00700 Bacterial flagellin C-terminal helical region Swol_0198 PF00669 Bacterial flagellin N-terminal helical region Swol_0198 PF00669 Bacterial flagellin N-terminal helical region Swol_0200 PF13302 Acetyltransferase (GNAT) domain Swol_0201 PF02348 Cytidylyltransferase Swol_0203 PF00202 Aminotransferase class-III Swol_0210 PF03102 NeuB family Swol_0210 PF08666 SAF domain Swol_0211 PF02585 GlcNAc-PI de-N-acetylase Swol_0212 PF03033 Glycosyltransferase family 28 N-terminal domain Swol_0212 PF04101 Glycosyltransferase family 28 C-terminal domain Swol_0221 PF01909 Nucleotidyltransferase domain Swol_0223 PF13614 AAA domain Swol_0227 PF02719 Polysaccharide biosynthesis protein Swol_0228 PF16363 GDP-mannose 4,6 dehydratase Swol_0229 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Swol_0237 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus Swol_0237 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Swol_0238 PF02810 SEC-C motif Swol_0238 PF07517 SecA DEAD-like domain Swol_0238 PF01043 SecA preprotein cross-linking domain Swol_0238 PF07516 SecA Wing and Scaffold domain Swol_0239 PF01618 MotA/TolQ/ExbB proton channel family Swol_0240 PF13677 Membrane MotB of proton-channel complex MotA/MotB Swol_0240 PF00691 OmpA family Swol_0241 PF03462 PCRF domain Swol_0241 PF00472 RF-1 domain Swol_0243 PF00456 Transketolase, thiamine diphosphate binding domain Swol_0244 PF02779 Transketolase, pyrimidine binding domain Swol_0244 PF02780 Transketolase, C-terminal domain Swol_0245 PF00005 ABC transporter Swol_0246 PF18075 FtsX extracellular domain Swol_0246 PF02687 FtsX-like permease family Swol_0247 PF01464 Transglycosylase SLT domain Swol_0247 PF10145 Phage-related minor tail protein Swol_0247 PF01551 Peptidase family M23 Swol_0248 PF13180 PDZ domain Swol_0248 PF03572 Peptidase family S41 Swol_0249 PF13180 PDZ domain Swol_0251 PF00271 Helicase conserved C-terminal domain Swol_0251 PF17757 UvrB interaction domain Swol_0251 PF04851 Type III restriction enzyme, res subunit Swol_0251 PF02151 UvrB/uvrC motif Swol_0251 PF12344 Ultra-violet resistance protein B Swol_0252 PF17760 UvrA interaction domain Swol_0252 PF17755 UvrA DNA-binding domain Swol_0254 PF01541 GIY-YIG catalytic domain Swol_0254 PF02151 UvrB/uvrC motif Swol_0254 PF08459 UvrC Helix-hairpin-helix N-terminal Swol_0255 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV Swol_0259 PF01047 MarR family Swol_0259 PF00480 ROK family Swol_0260 PF01380 SIS domain Swol_0260 PF10432 Bacterial phospho-glucose isomerase C-terminal SIS domain Swol_0262 PF03668 P-loop ATPase protein family Swol_0263 PF01933 Uncharacterised protein family UPF0052 Swol_0264 PF02650 WhiA C-terminal HTH domain Swol_0264 PF10298 WhiA N-terminal LAGLIDADG-like domain Swol_0264 PF14527 WhiA LAGLIDADG-like domain Swol_0265 PF04963 Sigma-54 factor, core binding domain Swol_0265 PF00309 Sigma-54 factor, Activator interacting domain (AID) Swol_0265 PF04552 Sigma-54, DNA binding domain Swol_0266 PF00766 Electron transfer flavoprotein FAD-binding domain Swol_0266 PF01012 Electron transfer flavoprotein domain Swol_0266 PF13237 4Fe-4S dicluster domain Swol_0267 PF01012 Electron transfer flavoprotein domain Swol_0268 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Swol_0268 PF02770 Acyl-CoA dehydrogenase, middle domain Swol_0268 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Swol_0269 PF01047 MarR family Swol_0271 PF04198 Putative sugar-binding domain Swol_0272 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Swol_0272 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Swol_0273 PF00162 Phosphoglycerate kinase Swol_0274 PF00121 Triosephosphate isomerase Swol_0275 PF01676 Metalloenzyme superfamily Swol_0275 PF06415 BPG-independent PGAM N-terminus (iPGM_N) Swol_0276 PF03952 Enolase, N-terminal domain Swol_0276 PF00113 Enolase, C-terminal TIM barrel domain Swol_0277 PF03840 Preprotein translocase SecG subunit Swol_0280 PF00575 S1 RNA binding domain Swol_0280 PF00773 RNB domain Swol_0280 PF08206 Ribonuclease B OB domain Swol_0280 PF17876 Cold shock domain Swol_0281 PF01668 SmpB protein Swol_0291 PF00144 Beta-lactamase Swol_0293 PF00395 S-layer homology domain Swol_0293 PF00128 Alpha amylase, catalytic domain Swol_0293 PF02903 Alpha amylase, N-terminal ig-like domain Swol_0294 PF11954 Domain of unknown function (DUF3471) Swol_0294 PF00144 Beta-lactamase Swol_0298 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) Swol_0298 PF07581 The GLUG motif Swol_0304 PF01348 Type II intron maturase Swol_0304 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Swol_0305 PF10996 Beta-Casp domain Swol_0305 PF00753 Metallo-beta-lactamase superfamily Swol_0305 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Swol_0306 PF00158 Sigma-54 interaction domain Swol_0306 PF00989 PAS fold Swol_0306 PF02954 Bacterial regulatory protein, Fis family Swol_0307 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Swol_0307 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Swol_0308 PF02803 Thiolase, C-terminal domain Swol_0308 PF00108 Thiolase, N-terminal domain Swol_0309 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Swol_0309 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Swol_0311 PF00375 Sodium:dicarboxylate symporter family Swol_0313 PF01554 MatE Swol_0314 PF00005 ABC transporter Swol_0315 PF00528 Binding-protein-dependent transport system inner membrane component Swol_0316 PF00497 Bacterial extracellular solute-binding proteins, family 3 Swol_0317 PF00150 Cellulase (glycosyl hydrolase family 5) Swol_0317 PF00395 S-layer homology domain Swol_0317 PF03424 Carbohydrate binding domain (family 17/28) Swol_0318 PF01926 50S ribosome-binding GTPase Swol_0318 PF12631 MnmE helical domain Swol_0318 PF10396 GTP-binding protein TrmE N-terminus Swol_0321 PF04239 Protein of unknown function (DUF421) Swol_0323 PF00005 ABC transporter Swol_0324 PF02653 Branched-chain amino acid transport system / permease component Swol_0329 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Swol_0333 PF01661 Macro domain Swol_0334 PF08769 Sporulation initiation factor Spo0A C terminal Swol_0334 PF00072 Response regulator receiver domain Swol_0336 PF00563 EAL domain Swol_0336 PF03707 Bacterial signalling protein N terminal repeat Swol_0336 PF00990 Diguanylate cyclase, GGDEF domain Swol_0337 PF00072 Response regulator receiver domain Swol_0339 PF00005 ABC transporter Swol_0340 PF00528 Binding-protein-dependent transport system inner membrane component Swol_0342 PF03109 ABC1 family Swol_0343 PF00211 Adenylate and Guanylate cyclase catalytic domain Swol_0343 PF00072 Response regulator receiver domain Swol_0344 PF03775 Septum formation inhibitor MinC, C-terminal domain Swol_0345 PF03776 Septum formation topological specificity factor MinE Swol_0346 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Swol_0347 PF03618 Kinase/pyrophosphorylase Swol_0348 PF01966 HD domain Swol_0352 PF00916 Sulfate permease family Swol_0352 PF01740 STAS domain Swol_0353 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_0353 PF07194 P2 response regulator binding domain Swol_0353 PF01627 Hpt domain Swol_0353 PF02895 Signal transducing histidine kinase, homodimeric domain Swol_0353 PF01584 CheW-like domain Swol_0355 PF00072 Response regulator receiver domain Swol_0356 PF12557 Cob(I)alamin adenosyltransferase N terminal Swol_0356 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Swol_0358 PF02885 Glycosyl transferase family, helical bundle domain Swol_0358 PF00591 Glycosyl transferase family, a/b domain Swol_0359 PF00218 Indole-3-glycerol phosphate synthase Swol_0360 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Swol_0361 PF00291 Pyridoxal-phosphate dependent enzyme Swol_0362 PF00290 Tryptophan synthase alpha chain Swol_0363 PF18152 DAHP synthase ferredoxin-like domain Swol_0363 PF00793 DAHP synthetase I family Swol_0364 PF04715 Anthranilate synthase component I, N terminal region Swol_0364 PF00425 chorismate binding enzyme Swol_0364 PF00117 Glutamine amidotransferase class-I Swol_0365 PF02743 Cache domain Swol_0365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Swol_0365 PF00672 HAMP domain Swol_0368 PF13361 UvrD-like helicase C-terminal domain Swol_0368 PF00580 UvrD/REP helicase N-terminal domain Swol_0369 PF03120 NAD-dependent DNA ligase OB-fold domain Swol_0369 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Swol_0369 PF12826 Helix-hairpin-helix motif Swol_0369 PF00533 BRCA1 C Terminus (BRCT) domain Swol_0369 PF01653 NAD-dependent DNA ligase adenylation domain Swol_0371 PF04474 Protein of unknown function (DUF554) Swol_0372 PF02686 Glu-tRNAGln amidotransferase C subunit Swol_0373 PF01425 Amidase Swol_0374 PF02637 GatB domain Swol_0374 PF02934 GatB/GatE catalytic domain Swol_0375 PF00682 HMGL-like Swol_0376 PF00330 Aconitase family (aconitate hydratase) Swol_0377 PF00694 Aconitase C-terminal domain Swol_0378 PF00180 Isocitrate/isopropylmalate dehydrogenase Swol_0380 PF02219 Methylenetetrahydrofolate reductase Swol_0381 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_0381 PF00512 His Kinase A (phospho-acceptor) domain Swol_0381 PF09308 LuxQ, periplasmic Swol_0381 PF00072 Response regulator receiver domain Swol_0384 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Swol_0384 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Swol_0384 PF12806 Acetyl-CoA dehydrogenase C-terminal like Swol_0384 PF02770 Acyl-CoA dehydrogenase, middle domain Swol_0392 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system Swol_0396 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Swol_0396 PF07992 Pyridine nucleotide-disulphide oxidoreductase Swol_0402 PF00970 Oxidoreductase FAD-binding domain Swol_0402 PF00111 2Fe-2S iron-sulfur cluster binding domain Swol_0402 PF00175 Oxidoreductase NAD-binding domain Swol_0403 PF00528 Binding-protein-dependent transport system inner membrane component Swol_0404 PF00528 Binding-protein-dependent transport system inner membrane component Swol_0408 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Swol_0409 PF00005 ABC transporter Swol_0409 PF17912 MalK OB fold domain Swol_0409 PF03459 TOBE domain Swol_0410 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component Swol_0411 PF01869 BadF/BadG/BcrA/BcrD ATPase family Swol_0412 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component Swol_0414 PF00005 ABC transporter Swol_0417 PF01208 Uroporphyrinogen decarboxylase (URO-D) Swol_0418 PF02310 B12 binding domain Swol_0418 PF02607 B12 binding domain Swol_0420 PF00175 Oxidoreductase NAD-binding domain Swol_0420 PF00111 2Fe-2S iron-sulfur cluster binding domain Swol_0420 PF00970 Oxidoreductase FAD-binding domain Swol_0421 PF02492 CobW/HypB/UreG, nucleotide-binding domain Swol_0421 PF07683 Cobalamin synthesis protein cobW C-terminal domain Swol_0423 PF13407 Periplasmic binding protein domain Swol_0424 PF02653 Branched-chain amino acid transport system / permease component Swol_0425 PF02653 Branched-chain amino acid transport system / permease component Swol_0426 PF00005 ABC transporter Swol_0427 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component Swol_0428 PF01869 BadF/BadG/BcrA/BcrD ATPase family Swol_0430 PF00665 Integrase core domain Swol_0430 PF13333 Integrase core domain Swol_0432 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system Swol_0435 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Swol_0435 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Swol_0436 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Swol_0436 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Swol_0437 PF00158 Sigma-54 interaction domain Swol_0437 PF02954 Bacterial regulatory protein, Fis family Swol_0437 PF00989 PAS fold Swol_0438 PF00753 Metallo-beta-lactamase superfamily Swol_0440 PF00202 Aminotransferase class-III Swol_0442 PF02645 Uncharacterised protein, DegV family COG1307 Swol_0443 PF04055 Radical SAM superfamily Swol_0443 PF00919 Uncharacterized protein family UPF0004 Swol_0444 PF04397 LytTr DNA-binding domain Swol_0444 PF00072 Response regulator receiver domain Swol_0445 PF17863 AAA lid domain Swol_0445 PF01078 Magnesium chelatase, subunit ChlI Swol_0446 PF01078 Magnesium chelatase, subunit ChlI Swol_0446 PF13519 von Willebrand factor type A domain Swol_0446 PF17863 AAA lid domain Swol_0449 PF01177 Asp/Glu/Hydantoin racemase Swol_0452 PF01869 BadF/BadG/BcrA/BcrD ATPase family Swol_0453 PF03725 3' exoribonuclease family, domain 2 Swol_0453 PF01138 3' exoribonuclease family, domain 1 Swol_0454 PF01725 Ham1 family Swol_0456 PF00158 Sigma-54 interaction domain Swol_0456 PF02954 Bacterial regulatory protein, Fis family Swol_0456 PF00989 PAS fold Swol_0461 PF02583 Metal-sensitive transcriptional repressor Swol_0462 PF00085 Thioredoxin Swol_0463 PF00004 ATPase family associated with various cellular activities (AAA) Swol_0463 PF12002 MgsA AAA+ ATPase C terminal Swol_0463 PF16193 AAA C-terminal domain Swol_0467 PF01594 AI-2E family transporter Swol_0468 PF02272 DHHA1 domain Swol_0468 PF01411 tRNA synthetases class II (A) Swol_0468 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Swol_0469 PF06135 IreB regulatory phosphoprotein Swol_0470 PF03652 Holliday junction resolvase Swol_0471 PF06949 Protein of unknown function (DUF1292) Swol_0472 PF04294 VanW like protein Swol_0473 PF02618 YceG-like family Swol_0476 PF09704 CRISPR-associated protein (Cas_Cas5) Swol_0480 PF01867 CRISPR associated protein Cas1 Swol_0481 PF09827 CRISPR associated protein Cas2 Swol_0483 PF01381 Helix-turn-helix Swol_0484 PF01695 IstB-like ATP binding protein Swol_0488 PF02770 Acyl-CoA dehydrogenase, middle domain Swol_0488 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Swol_0488 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Swol_0489 PF03793 PASTA domain Swol_0489 PF03717 Penicillin-binding Protein dimerisation domain Swol_0489 PF00905 Penicillin binding protein transpeptidase domain Swol_0490 PF00012 Hsp70 protein Swol_0491 PF01556 DnaJ C terminal domain Swol_0491 PF00226 DnaJ domain Swol_0493 PF17871 AAA lid domain Swol_0493 PF02861 Clp amino terminal domain, pathogenicity island component Swol_0493 PF10431 C-terminal, D2-small domain, of ClpB protein Swol_0493 PF07724 AAA domain (Cdc48 subfamily) Swol_0493 PF00004 ATPase family associated with various cellular activities (AAA) Swol_0497 PF01751 Toprim domain Swol_0497 PF01131 DNA topoisomerase Swol_0501 PF04545 Sigma-70, region 4 Swol_0501 PF04542 Sigma-70 region 2 Swol_0503 PF02086 D12 class N6 adenine-specific DNA methyltransferase Swol_0506 PF01548 Transposase Swol_0506 PF02371 Transposase IS116/IS110/IS902 family Swol_0507 PF00580 UvrD/REP helicase N-terminal domain Swol_0507 PF13361 UvrD-like helicase C-terminal domain Swol_0511 PF00271 Helicase conserved C-terminal domain Swol_0511 PF00270 DEAD/DEAH box helicase Swol_0512 PF12161 HsdM N-terminal domain Swol_0512 PF02384 N-6 DNA Methylase Swol_0516 PF04851 Type III restriction enzyme, res subunit Swol_0516 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) Swol_0516 PF00271 Helicase conserved C-terminal domain Swol_0516 PF08463 EcoEI R protein C-terminal Swol_0517 PF04545 Sigma-70, region 4 Swol_0517 PF04542 Sigma-70 region 2 Swol_0518 PF02504 Fatty acid synthesis protein Swol_0519 PF00289 Biotin carboxylase, N-terminal domain Swol_0519 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Swol_0519 PF02436 Conserved carboxylase domain Swol_0519 PF00682 HMGL-like Swol_0519 PF02785 Biotin carboxylase C-terminal domain Swol_0519 PF00364 Biotin-requiring enzyme Swol_0524 PF08501 Shikimate dehydrogenase substrate binding domain Swol_0524 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Swol_0526 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Swol_0527 PF01264 Chorismate synthase Swol_0528 PF01202 Shikimate kinase Swol_0529 PF01761 3-dehydroquinate synthase Swol_0531 PF00437 Type II/IV secretion system protein Swol_0532 PF00437 Type II/IV secretion system protein Swol_0533 PF00482 Type II secretion system (T2SS), protein F Swol_0534 PF14245 Type IV pilin PilA Swol_0534 PF07963 Prokaryotic N-terminal methylation motif Swol_0538 PF01478 Type IV leader peptidase family Swol_0538 PF06750 Bacterial Peptidase A24 N-terminal domain Swol_0542 PF01523 Putative modulator of DNA gyrase Swol_0543 PF01523 Putative modulator of DNA gyrase Swol_0544 PF01220 Dehydroquinase class II Swol_0545 PF00557 Metallopeptidase family M24 Swol_0545 PF01321 Creatinase/Prolidase N-terminal domain Swol_0546 PF01132 Elongation factor P (EF-P) OB domain Swol_0546 PF08207 Elongation factor P (EF-P) KOW-like domain Swol_0546 PF09285 Elongation factor P, C-terminal Swol_0553 PF06686 Stage III sporulation protein AC/AD protein family Swol_0554 PF09546 Stage III sporulation protein AE (spore_III_AE) Swol_0558 PF00364 Biotin-requiring enzyme Swol_0558 PF02436 Conserved carboxylase domain Swol_0558 PF00682 HMGL-like Swol_0559 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Swol_0559 PF02785 Biotin carboxylase C-terminal domain Swol_0559 PF00289 Biotin carboxylase, N-terminal domain Swol_0561 PF03780 Asp23 family, cell envelope-related function Swol_0564 PF01029 NusB family Swol_0565 PF00814 Glycoprotease family Swol_0566 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Swol_0566 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Swol_0567 PF13742 OB-fold nucleic acid binding domain Swol_0567 PF02601 Exonuclease VII, large subunit Swol_0568 PF02609 Exonuclease VII small subunit Swol_0569 PF00348 Polyprenyl synthetase Swol_0575 PF01554 MatE Swol_0582 PF02780 Transketolase, C-terminal domain Swol_0582 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Swol_0582 PF02779 Transketolase, pyrimidine binding domain Swol_0583 PF01479 S4 domain Swol_0583 PF01728 FtsJ-like methyltransferase Swol_0584 PF01513 ATP-NAD kinase Swol_0585 PF01316 Arginine repressor, DNA binding domain Swol_0585 PF02863 Arginine repressor, C-terminal domain Swol_0587 PF02463 RecF/RecN/SMC N terminal domain Swol_0588 PF00011 Hsp20/alpha crystallin family Swol_0589 PF05580 SpoIVB peptidase S55 Swol_0589 PF17820 PDZ domain Swol_0590 PF08769 Sporulation initiation factor Spo0A C terminal Swol_0590 PF00072 Response regulator receiver domain Swol_0592 PF11382 Copper transport outer membrane protein, MctB Swol_0593 PF00535 Glycosyl transferase family 2 Swol_0595 PF07687 Peptidase dimerisation domain Swol_0595 PF01546 Peptidase family M20/M25/M40 Swol_0597 PF00293 NUDIX domain Swol_0600 PF00990 Diguanylate cyclase, GGDEF domain Swol_0600 PF00072 Response regulator receiver domain Swol_0601 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Swol_0601 PF01627 Hpt domain Swol_0601 PF00072 Response regulator receiver domain Swol_0601 PF00512 His Kinase A (phospho-acceptor) domain Swol_0601 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_0601 PF00672 HAMP domain Swol_0602 PF02833 DHHA2 domain Swol_0602 PF07085 DRTGG domain Swol_0602 PF01368 DHH family Swol_0602 PF00571 CBS domain Swol_0605 PF01944 Stage II sporulation protein M Swol_0607 PF02899 Phage integrase, N-terminal SAM-like domain Swol_0607 PF00589 Phage integrase family Swol_0608 PF01676 Metalloenzyme superfamily Swol_0609 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Swol_0609 PF00591 Glycosyl transferase family, a/b domain Swol_0609 PF02885 Glycosyl transferase family, helical bundle domain Swol_0612 PF07943 Penicillin-binding protein 5, C-terminal domain Swol_0612 PF00768 D-alanyl-D-alanine carboxypeptidase Swol_0613 PF01740 STAS domain Swol_0614 PF13581 Histidine kinase-like ATPase domain Swol_0615 PF04542 Sigma-70 region 2 Swol_0615 PF04539 Sigma-70 region 3 Swol_0615 PF04545 Sigma-70, region 4 Swol_0617 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Swol_0617 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Swol_0617 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Swol_0618 PF16363 GDP-mannose 4,6 dehydratase Swol_0619 PF01370 NAD dependent epimerase/dehydratase family Swol_0620 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system Swol_0623 PF00690 Cation transporter/ATPase, N-terminus Swol_0623 PF00689 Cation transporting ATPase, C-terminus Swol_0626 PF03862 SpoVAC/SpoVAEB sporulation membrane protein Swol_0627 PF07451 Stage V sporulation protein AD (SpoVAD) Swol_0628 PF03862 SpoVAC/SpoVAEB sporulation membrane protein Swol_0629 PF03323 Bacillus/Clostridium GerA spore germination protein Swol_0632 PF01869 BadF/BadG/BcrA/BcrD ATPase family Swol_0633 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Swol_0633 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Swol_0633 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Swol_0639 PF08543 Phosphomethylpyrimidine kinase Swol_0640 PF02110 Hydroxyethylthiazole kinase family Swol_0641 PF02581 Thiamine monophosphate synthase Swol_0643 PF01964 Radical SAM ThiC family Swol_0644 PF00291 Pyridoxal-phosphate dependent enzyme Swol_0646 PF01784 NIF3 (NGG1p interacting factor 3) Swol_0647 PF01966 HD domain Swol_0647 PF11871 Domain of unknown function (DUF3391) Swol_0648 PF00216 Bacterial DNA-binding protein Swol_0650 PF00378 Enoyl-CoA hydratase/isomerase Swol_0653 PF02811 PHP domain Swol_0655 PF06133 Control of competence regulator ComK, YlbF/YmcA Swol_0657 PF00037 4Fe-4S binding domain Swol_0657 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Swol_0657 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Swol_0658 PF07992 Pyridine nucleotide-disulphide oxidoreductase Swol_0658 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Swol_0658 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Swol_0659 PF13145 PPIC-type PPIASE domain Swol_0660 PF01475 Ferric uptake regulator family Swol_0661 PF07664 Ferrous iron transport protein B C terminus Swol_0661 PF02421 Ferrous iron transport protein B Swol_0661 PF07670 Nucleoside recognition Swol_0663 PF10609 NUBPL iron-transfer P-loop NTPase Swol_0664 PF00005 ABC transporter Swol_0665 PF01458 Uncharacterized protein family (UPF0051) Swol_0666 PF00005 ABC transporter Swol_0666 PF03466 LysR substrate binding domain Swol_0669 PF00491 Arginase family Swol_0670 PF02915 Rubrerythrin Swol_0672 PF00579 tRNA synthetases class I (W and Y) Swol_0674 PF02675 S-adenosylmethionine decarboxylase Swol_0675 PF00108 Thiolase, N-terminal domain Swol_0675 PF02803 Thiolase, C-terminal domain Swol_0677 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Swol_0678 PF01040 UbiA prenyltransferase family Swol_0680 PF00348 Polyprenyl synthetase Swol_0681 PF00902 Sec-independent protein translocase protein (TatC) Swol_0682 PF02416 mttA/Hcf106 family Swol_0683 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Swol_0683 PF14824 Sirohaem biosynthesis protein central Swol_0683 PF10414 Sirohaem synthase dimerisation region Swol_0685 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Swol_0685 PF03900 Porphobilinogen deaminase, C-terminal domain Swol_0688 PF04055 Radical SAM superfamily Swol_0688 PF13186 Iron-sulfur cluster-binding domain Swol_0690 PF00490 Delta-aminolevulinic acid dehydratase Swol_0691 PF13186 Iron-sulfur cluster-binding domain Swol_0691 PF04055 Radical SAM superfamily Swol_0693 PF17805 AsnC-like ligand binding domain Swol_0694 PF00202 Aminotransferase class-III Swol_0695 PF03705 CheR methyltransferase, all-alpha domain Swol_0695 PF01739 CheR methyltransferase, SAM binding domain Swol_0696 PF01012 Electron transfer flavoprotein domain Swol_0697 PF01012 Electron transfer flavoprotein domain Swol_0697 PF00766 Electron transfer flavoprotein FAD-binding domain Swol_0698 PF02665 Nitrate reductase gamma subunit Swol_0698 PF13183 4Fe-4S dicluster domain Swol_0698 PF02754 Cysteine-rich domain Swol_0699 PF01467 Cytidylyltransferase-like Swol_0703 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Swol_0704 PF00132 Bacterial transferase hexapeptide (six repeats) Swol_0705 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Swol_0705 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Swol_0705 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Swol_0706 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Swol_0706 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Swol_0707 PF01370 NAD dependent epimerase/dehydratase family Swol_0708 PF01266 FAD dependent oxidoreductase Swol_0710 PF16363 GDP-mannose 4,6 dehydratase Swol_0711 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Swol_0712 PF00733 Asparagine synthase Swol_0712 PF13537 Glutamine amidotransferase domain Swol_0717 PF02911 Formyl transferase, C-terminal domain Swol_0717 PF00551 Formyl transferase Swol_0726 PF02719 Polysaccharide biosynthesis protein Swol_0726 PF08485 Polysaccharide biosynthesis protein C-terminal Swol_0727 PF04321 RmlD substrate binding domain Swol_0731 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Swol_0731 PF00953 Glycosyl transferase family 4 Swol_0734 PF01695 IstB-like ATP binding protein Swol_0736 PF02899 Phage integrase, N-terminal SAM-like domain Swol_0736 PF00589 Phage integrase family Swol_0738 PF00589 Phage integrase family Swol_0738 PF02899 Phage integrase, N-terminal SAM-like domain Swol_0739 PF00589 Phage integrase family Swol_0739 PF02899 Phage integrase, N-terminal SAM-like domain Swol_0740 PF00589 Phage integrase family Swol_0744 PF13614 AAA domain Swol_0751 PF00483 Nucleotidyl transferase Swol_0751 PF01050 Mannose-6-phosphate isomerase Swol_0756 PF07501 G5 domain Swol_0756 PF03990 G5-linked-Ubiquitin-like domain Swol_0756 PF06725 3D domain Swol_0757 PF00830 Ribosomal L28 family Swol_0758 PF03780 Asp23 family, cell envelope-related function Swol_0759 PF02734 DAK2 domain Swol_0759 PF13684 Dihydroxyacetone kinase family Swol_0760 PF00269 Small, acid-soluble spore proteins, alpha/beta type Swol_0761 PF03418 Germination protease Swol_0764 PF07670 Nucleoside recognition Swol_0765 PF01734 Patatin-like phospholipase Swol_0766 PF05636 HIGH Nucleotidyl Transferase Swol_0767 PF01515 Phosphate acetyl/butaryl transferase Swol_0768 PF00871 Acetokinase family Swol_0770 PF01783 Ribosomal L32p protein family Swol_0771 PF02504 Fatty acid synthesis protein Swol_0772 PF00550 Phosphopantetheine attachment site Swol_0773 PF00035 Double-stranded RNA binding motif Swol_0773 PF14622 Ribonuclease-III-like Swol_0775 PF02237 Biotin protein ligase C terminal domain Swol_0775 PF03099 Biotin/lipoate A/B protein ligase family Swol_0775 PF08279 HTH domain Swol_0776 PF06470 SMC proteins Flexible Hinge Domain Swol_0776 PF02463 RecF/RecN/SMC N terminal domain Swol_0777 PF02881 SRP54-type protein, helical bundle domain Swol_0777 PF00448 SRP54-type protein, GTPase domain Swol_0778 PF01048 Phosphorylase superfamily Swol_0779 PF01008 Initiation factor 2 subunit family Swol_0780 PF00596 Class II Aldolase and Adducin N-terminal domain Swol_0781 PF01979 Amidohydrolase family Swol_0784 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Swol_0784 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Swol_0784 PF00037 4Fe-4S binding domain Swol_0785 PF13237 4Fe-4S dicluster domain Swol_0785 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Swol_0785 PF01568 Molydopterin dinucleotide binding domain Swol_0785 PF00384 Molybdopterin oxidoreductase Swol_0785 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Swol_0786 PF00384 Molybdopterin oxidoreductase Swol_0786 PF01568 Molydopterin dinucleotide binding domain Swol_0786 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Swol_0787 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Swol_0787 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Swol_0788 PF02770 Acyl-CoA dehydrogenase, middle domain Swol_0788 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Swol_0788 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Swol_0790 PF00378 Enoyl-CoA hydratase/isomerase Swol_0791 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Swol_0791 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Swol_0792 PF02954 Bacterial regulatory protein, Fis family Swol_0792 PF00989 PAS fold Swol_0792 PF00158 Sigma-54 interaction domain Swol_0797 PF01292 Prokaryotic cytochrome b561 Swol_0798 PF12800 4Fe-4S binding domain Swol_0798 PF13247 4Fe-4S dicluster domain Swol_0798 PF09163 Formate dehydrogenase N, transmembrane Swol_0799 PF00384 Molybdopterin oxidoreductase Swol_0799 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Swol_0799 PF01568 Molydopterin dinucleotide binding domain Swol_0800 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Swol_0800 PF00384 Molybdopterin oxidoreductase Swol_0800 PF01568 Molydopterin dinucleotide binding domain Swol_0801 PF03453 MoeA N-terminal region (domain I and II) Swol_0801 PF03454 MoeA C-terminal region (domain IV) Swol_0801 PF00994 Probable molybdopterin binding domain Swol_0802 PF00994 Probable molybdopterin binding domain Swol_0802 PF03454 MoeA C-terminal region (domain IV) Swol_0802 PF03453 MoeA N-terminal region (domain I and II) Swol_0805 PF01368 DHH family Swol_0805 PF10141 Single-strand DNA-specific exonuclease, C terminal domain Swol_0805 PF02272 DHHA1 domain Swol_0805 PF17768 RecJ OB domain Swol_0806 PF04607 Region found in RelA / SpoT proteins Swol_0806 PF13291 ACT domain Swol_0806 PF02824 TGS domain Swol_0807 PF02580 D-Tyr-tRNA(Tyr) deacylase Swol_0808 PF00753 Metallo-beta-lactamase superfamily Swol_0809 PF18152 DAHP synthase ferredoxin-like domain Swol_0809 PF00793 DAHP synthetase I family Swol_0810 PF01842 ACT domain Swol_0810 PF00800 Prephenate dehydratase Swol_0811 PF03129 Anticodon binding domain Swol_0811 PF13393 Histidyl-tRNA synthetase Swol_0812 PF01336 OB-fold nucleic acid binding domain Swol_0812 PF00152 tRNA synthetases class II (D, K and N) Swol_0812 PF02938 GAD domain Swol_0813 PF00899 ThiF family Swol_0814 PF00730 HhH-GPD superfamily base excision DNA repair protein Swol_0814 PF00633 Helix-hairpin-helix motif Swol_0814 PF10576 Iron-sulfur binding domain of endonuclease III Swol_0815 PF00501 AMP-binding enzyme Swol_0815 PF14535 AMP-binding enzyme C-terminal domain Swol_0817 PF02381 MraZ protein, putative antitoxin-like Swol_0820 PF00905 Penicillin binding protein transpeptidase domain Swol_0820 PF03717 Penicillin-binding Protein dimerisation domain Swol_0820 PF03793 PASTA domain Swol_0821 PF01225 Mur ligase family, catalytic domain Swol_0821 PF02875 Mur ligase family, glutamate ligase domain Swol_0821 PF08245 Mur ligase middle domain Swol_0822 PF01225 Mur ligase family, catalytic domain Swol_0822 PF02875 Mur ligase family, glutamate ligase domain Swol_0822 PF08245 Mur ligase middle domain Swol_0823 PF00953 Glycosyl transferase family 4 Swol_0824 PF08245 Mur ligase middle domain Swol_0824 PF02875 Mur ligase family, glutamate ligase domain Swol_0825 PF01098 Cell cycle protein Swol_0826 PF03033 Glycosyltransferase family 28 N-terminal domain Swol_0826 PF04101 Glycosyltransferase family 28 C-terminal domain Swol_0827 PF08245 Mur ligase middle domain Swol_0827 PF01225 Mur ligase family, catalytic domain Swol_0827 PF02875 Mur ligase family, glutamate ligase domain Swol_0828 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Swol_0829 PF08478 POTRA domain, FtsQ-type Swol_0829 PF03799 Cell division protein FtsQ Swol_0831 PF06947 Protein of unknown function (DUF1290) Swol_0832 PF02491 SHS2 domain inserted in FTSA Swol_0833 PF12327 FtsZ family, C-terminal domain Swol_0833 PF00091 Tubulin/FtsZ family, GTPase domain Swol_0834 PF03419 Sporulation factor SpoIIGA Swol_0835 PF04545 Sigma-70, region 4 Swol_0835 PF04542 Sigma-70 region 2 Swol_0836 PF04542 Sigma-70 region 2 Swol_0836 PF04539 Sigma-70 region 3 Swol_0836 PF04545 Sigma-70, region 4 Swol_0838 PF01555 DNA methylase Swol_0839 PF17782 DprA winged helix domain Swol_0839 PF02481 DNA recombination-mediator protein A Swol_0840 PF01396 Topoisomerase DNA binding C4 zinc finger Swol_0840 PF01751 Toprim domain Swol_0840 PF01131 DNA topoisomerase Swol_0841 PF01134 Glucose inhibited division protein A Swol_0842 PF02899 Phage integrase, N-terminal SAM-like domain Swol_0842 PF00589 Phage integrase family Swol_0843 PF00227 Proteasome subunit Swol_0844 PF07724 AAA domain (Cdc48 subfamily) Swol_0844 PF10431 C-terminal, D2-small domain, of ClpB protein Swol_0845 PF08222 CodY helix-turn-helix domain Swol_0845 PF06018 CodY GAF-like domain Swol_0846 PF00460 Flagella basal body rod protein Swol_0847 PF00460 Flagella basal body rod protein Swol_0847 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Swol_0848 PF02049 Flagellar hook-basal body complex protein FliE Swol_0849 PF08345 Flagellar M-ring protein C-terminal Swol_0849 PF01514 Secretory protein of YscJ/FliF family Swol_0852 PF02874 ATP synthase alpha/beta family, beta-barrel domain Swol_0852 PF18269 T3SS EscN ATPase C-terminal domain Swol_0852 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Swol_0856 PF03963 Flagellar hook capping protein - N-terminal region Swol_0858 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Swol_0858 PF00460 Flagella basal body rod protein Swol_0858 PF07559 Flagellar basal body protein FlaE Swol_0861 PF02154 Flagellar motor switch protein FliM Swol_0861 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Swol_0862 PF04509 CheC-like family Swol_0862 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Swol_0863 PF00072 Response regulator receiver domain Swol_0865 PF00813 FliP family Swol_0866 PF01313 Bacterial export proteins, family 3 Swol_0867 PF01311 Bacterial export proteins, family 1 Swol_0868 PF01312 FlhB HrpN YscU SpaS Family Swol_0869 PF00771 FHIPEP family Swol_0870 PF00448 SRP54-type protein, GTPase domain Swol_0871 PF10609 NUBPL iron-transfer P-loop NTPase Swol_0873 PF01339 CheB methylesterase Swol_0873 PF00072 Response regulator receiver domain Swol_0874 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_0874 PF02895 Signal transducing histidine kinase, homodimeric domain Swol_0874 PF01584 CheW-like domain Swol_0874 PF07194 P2 response regulator binding domain Swol_0874 PF01627 Hpt domain Swol_0875 PF01584 CheW-like domain Swol_0876 PF04509 CheC-like family Swol_0877 PF03975 CheD chemotactic sensory transduction Swol_0878 PF04545 Sigma-70, region 4 Swol_0878 PF04542 Sigma-70 region 2 Swol_0878 PF04539 Sigma-70 region 3 Swol_0881 PF11987 Translation-initiation factor 2 Swol_0881 PF04760 Translation initiation factor IF-2, N-terminal region Swol_0881 PF00009 Elongation factor Tu GTP binding domain Swol_0882 PF00318 Ribosomal protein S2 Swol_0883 PF00889 Elongation factor TS Swol_0884 PF00696 Amino acid kinase family Swol_0885 PF01765 Ribosome recycling factor Swol_0886 PF01255 Putative undecaprenyl diphosphate synthase Swol_0888 PF01594 AI-2E family transporter Swol_0889 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Swol_0889 PF13288 DXP reductoisomerase C-terminal domain Swol_0889 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Swol_0890 PF17820 PDZ domain Swol_0890 PF02163 Peptidase family M50 Swol_0891 PF04551 GcpE protein Swol_0892 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Swol_0892 PF03129 Anticodon binding domain Swol_0892 PF04073 Aminoacyl-tRNA editing domain Swol_0894 PF02308 MgtC family Swol_0895 PF11490 DNA polymerase III polC-type N-terminus II Swol_0895 PF14579 Helix-hairpin-helix motif Swol_0895 PF00929 Exonuclease Swol_0895 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Swol_0895 PF07733 Bacterial DNA polymerase III alpha NTPase domain Swol_0895 PF02811 PHP domain Swol_0896 PF17384 RimP C-terminal SH3 domain Swol_0896 PF02576 RimP N-terminal domain Swol_0897 PF13184 NusA-like KH domain Swol_0897 PF00575 S1 RNA binding domain Swol_0897 PF08529 NusA N-terminal domain Swol_0898 PF04296 Protein of unknown function (DUF448) Swol_0900 PF04760 Translation initiation factor IF-2, N-terminal region Swol_0900 PF11987 Translation-initiation factor 2 Swol_0900 PF00009 Elongation factor Tu GTP binding domain Swol_0901 PF02033 Ribosome-binding factor A Swol_0902 PF02272 DHHA1 domain Swol_0902 PF01368 DHH family Swol_0903 PF16198 tRNA pseudouridylate synthase B C-terminal domain Swol_0903 PF01509 TruB family pseudouridylate synthase (N terminal domain) Swol_0903 PF09157 Pseudouridine synthase II TruB, C-terminal Swol_0904 PF06574 FAD synthetase Swol_0904 PF01687 Riboflavin kinase Swol_0905 PF00312 Ribosomal protein S15 Swol_0906 PF00575 S1 RNA binding domain Swol_0906 PF03725 3' exoribonuclease family, domain 2 Swol_0906 PF00013 KH domain Swol_0906 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Swol_0906 PF01138 3' exoribonuclease family, domain 1 Swol_0908 PF01522 Polysaccharide deacetylase Swol_0909 PF00768 D-alanyl-D-alanine carboxypeptidase Swol_0909 PF07943 Penicillin-binding protein 5, C-terminal domain Swol_0910 PF05193 Peptidase M16 inactive domain Swol_0910 PF00675 Insulinase (Peptidase family M16) Swol_0911 PF00692 dUTPase Swol_0913 PF02386 Cation transport protein Swol_0914 PF02254 TrkA-N domain Swol_0914 PF02080 TrkA-C domain Swol_0916 PF00478 IMP dehydrogenase / GMP reductase domain Swol_0916 PF00571 CBS domain Swol_0917 PF02308 MgtC family Swol_0918 PF00269 Small, acid-soluble spore proteins, alpha/beta type Swol_0921 PF00905 Penicillin binding protein transpeptidase domain Swol_0921 PF00912 Transglycosylase Swol_0922 PF03591 AzlC protein Swol_0925 PF13654 AAA domain Swol_0925 PF05362 Lon protease (S16) C-terminal proteolytic domain Swol_0927 PF00672 HAMP domain Swol_0927 PF17202 Single cache domain 3 Swol_0927 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Swol_0930 PF00749 tRNA synthetases class I (E and Q), catalytic domain Swol_0933 PF08267 Cobalamin-independent synthase, N-terminal domain Swol_0933 PF01717 Cobalamin-independent synthase, Catalytic domain Swol_0934 PF02219 Methylenetetrahydrofolate reductase Swol_0935 PF03466 LysR substrate binding domain Swol_0935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Swol_0936 PF01022 Bacterial regulatory protein, arsR family Swol_0937 PF06953 Arsenical resistance operon trans-acting repressor ArsD Swol_0938 PF02374 Anion-transporting ATPase Swol_0939 PF01758 Sodium Bile acid symporter family Swol_0940 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain Swol_0940 PF01118 Semialdehyde dehydrogenase, NAD binding domain Swol_0941 PF00005 ABC transporter Swol_0943 PF02687 FtsX-like permease family Swol_0943 PF12704 MacB-like periplasmic core domain Swol_0946 PF10135 Rod binding protein Swol_0946 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Swol_0947 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Swol_0947 PF00460 Flagella basal body rod protein Swol_0948 PF05239 PRC-barrel domain Swol_0949 PF03477 ATP cone domain Swol_0951 PF00072 Response regulator receiver domain Swol_0951 PF00486 Transcriptional regulatory protein, C terminal Swol_0952 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_0952 PF00512 His Kinase A (phospho-acceptor) domain Swol_0952 PF00989 PAS fold Swol_0952 PF16736 Single Cache-like Swol_0953 PF01168 Alanine racemase, N-terminal domain Swol_0954 PF04472 Cell division protein SepF Swol_0955 PF14748 Pyrroline-5-carboxylate reductase dimerisation Swol_0955 PF03807 NADP oxidoreductase coenzyme F420-dependent Swol_0956 PF02325 YGGT family Swol_0957 PF01136 Peptidase family U32 Swol_0957 PF12392 Collagenase Swol_0958 PF05103 DivIVA protein Swol_0959 PF02594 Uncharacterised ACR, YggU family COG1872 Swol_0961 PF10576 Iron-sulfur binding domain of endonuclease III Swol_0961 PF00633 Helix-hairpin-helix motif Swol_0961 PF00730 HhH-GPD superfamily base excision DNA repair protein Swol_0962 PF06827 Zinc finger found in FPG and IleRS Swol_0962 PF00133 tRNA synthetases class I (I, L, M and V) Swol_0962 PF08264 Anticodon-binding domain of tRNA Swol_0964 PF01258 Prokaryotic dksA/traR C4-type zinc finger Swol_0965 PF00534 Glycosyl transferases group 1 Swol_0965 PF13439 Glycosyltransferase Family 4 Swol_0966 PF08353 Domain of unknown function (DUF1727) Swol_0966 PF08245 Mur ligase middle domain Swol_0967 PF07685 CobB/CobQ-like glutamine amidotransferase domain Swol_0968 PF00348 Polyprenyl synthetase Swol_0969 PF10776 Protein of unknown function (DUF2600) Swol_0970 PF05979 Bacterial protein of unknown function (DUF896) Swol_0971 PF00672 HAMP domain Swol_0971 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Swol_0971 PF02743 Cache domain Swol_0972 PF00919 Uncharacterized protein family UPF0004 Swol_0972 PF04055 Radical SAM superfamily Swol_0972 PF01938 TRAM domain Swol_0974 PF05188 MutS domain II Swol_0974 PF01624 MutS domain I Swol_0974 PF05190 MutS family domain IV Swol_0974 PF00488 MutS domain V Swol_0974 PF05192 MutS domain III Swol_0976 PF00850 Histone deacetylase domain Swol_0977 PF01119 DNA mismatch repair protein, C-terminal domain Swol_0977 PF08676 MutL C terminal dimerisation domain Swol_0978 PF04445 Putative SAM-dependent methyltransferase Swol_0980 PF17209 Hfq protein Swol_0983 PF17866 AAA lid domain Swol_0983 PF00004 ATPase family associated with various cellular activities (AAA) Swol_0984 PF13173 AAA domain Swol_0984 PF13635 Domain of unknown function (DUF4143) Swol_0999 PF00004 ATPase family associated with various cellular activities (AAA) Swol_0999 PF02190 ATP-dependent protease La (LON) substrate-binding domain Swol_0999 PF05362 Lon protease (S16) C-terminal proteolytic domain Swol_1000 PF01230 HIT domain Swol_1005 PF06838 Methionine gamma-lyase Swol_1007 PF03951 Glutamine synthetase, beta-Grasp domain Swol_1007 PF00120 Glutamine synthetase, catalytic domain Swol_1008 PF00717 Peptidase S24-like Swol_1008 PF01726 LexA DNA binding domain Swol_1009 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system Swol_1011 PF01171 PP-loop family Swol_1012 PF02754 Cysteine-rich domain Swol_1013 PF01565 FAD binding domain Swol_1013 PF02913 FAD linked oxidases, C-terminal domain Swol_1014 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Swol_1014 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Swol_1015 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Swol_1015 PF01565 FAD binding domain Swol_1017 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Swol_1017 PF00037 4Fe-4S binding domain Swol_1017 PF02906 Iron only hydrogenase large subunit, C-terminal domain Swol_1017 PF02256 Iron hydrogenase small subunit Swol_1018 PF00037 4Fe-4S binding domain Swol_1018 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Swol_1018 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Swol_1020 PF06968 Biotin and Thiamin Synthesis associated domain Swol_1020 PF04055 Radical SAM superfamily Swol_1024 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Swol_1024 PF00037 4Fe-4S binding domain Swol_1024 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Swol_1026 PF03454 MoeA C-terminal region (domain IV) Swol_1026 PF03453 MoeA N-terminal region (domain I and II) Swol_1026 PF00994 Probable molybdopterin binding domain Swol_1028 PF00384 Molybdopterin oxidoreductase Swol_1028 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Swol_1028 PF01568 Molydopterin dinucleotide binding domain Swol_1029 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Swol_1029 PF12838 4Fe-4S dicluster domain Swol_1029 PF00384 Molybdopterin oxidoreductase Swol_1029 PF01568 Molydopterin dinucleotide binding domain Swol_1029 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Swol_1030 PF02634 FdhD/NarQ family Swol_1031 PF01066 CDP-alcohol phosphatidyltransferase Swol_1033 PF02146 Sir2 family Swol_1035 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Swol_1040 PF08447 PAS fold Swol_1040 PF00512 His Kinase A (phospho-acceptor) domain Swol_1040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_1040 PF00989 PAS fold Swol_1041 PF00072 Response regulator receiver domain Swol_1041 PF01966 HD domain Swol_1046 PF00005 ABC transporter Swol_1048 PF02901 Pyruvate formate lyase-like Swol_1048 PF01228 Glycine radical Swol_1049 PF04055 Radical SAM superfamily Swol_1050 PF02645 Uncharacterised protein, DegV family COG1307 Swol_1051 PF16916 Dimerisation domain of Zinc Transporter Swol_1051 PF01545 Cation efflux family Swol_1054 PF00989 PAS fold Swol_1054 PF00512 His Kinase A (phospho-acceptor) domain Swol_1054 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_1054 PF13426 PAS domain Swol_1054 PF13188 PAS domain Swol_1059 PF00005 ABC transporter Swol_1064 PF03030 Inorganic H+ pyrophosphatase Swol_1068 PF01522 Polysaccharide deacetylase Swol_1069 PF13739 Deacetylase PdaC Swol_1069 PF01522 Polysaccharide deacetylase Swol_1069 PF11738 Protein of unknown function (DUF3298) Swol_1070 PF00497 Bacterial extracellular solute-binding proteins, family 3 Swol_1071 PF00528 Binding-protein-dependent transport system inner membrane component Swol_1072 PF00005 ABC transporter Swol_1076 PF07581 The GLUG motif Swol_1076 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) Swol_1078 PF07581 The GLUG motif Swol_1078 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) Swol_1080 PF00196 Bacterial regulatory proteins, luxR family Swol_1080 PF17874 MalT-like TPR region Swol_1082 PF03448 MgtE intracellular N domain Swol_1082 PF01769 Divalent cation transporter Swol_1082 PF00571 CBS domain Swol_1084 PF00668 Condensation domain Swol_1084 PF13193 AMP-binding enzyme C-terminal domain Swol_1084 PF00501 AMP-binding enzyme Swol_1084 PF00550 Phosphopantetheine attachment site Swol_1085 PF01648 4'-phosphopantetheinyl transferase superfamily Swol_1086 PF00082 Subtilase family Swol_1088 PF04286 Protein of unknown function (DUF445) Swol_1089 PF03129 Anticodon binding domain Swol_1089 PF02824 TGS domain Swol_1089 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Swol_1089 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Swol_1090 PF05198 Translation initiation factor IF-3, N-terminal domain Swol_1090 PF00707 Translation initiation factor IF-3, C-terminal domain Swol_1091 PF01632 Ribosomal protein L35 Swol_1092 PF00453 Ribosomal protein L20 Swol_1093 PF08032 RNA 2'-O ribose methyltransferase substrate binding Swol_1093 PF00588 SpoU rRNA Methylase family Swol_1094 PF01409 tRNA synthetases class II core domain (F) Swol_1094 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Swol_1095 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Swol_1095 PF01588 Putative tRNA binding domain Swol_1095 PF03147 Ferredoxin-fold anticodon binding domain Swol_1095 PF03484 tRNA synthetase B5 domain Swol_1095 PF03483 B3/4 domain Swol_1097 PF00571 CBS domain Swol_1097 PF00478 IMP dehydrogenase / GMP reductase domain Swol_1099 PF00561 alpha/beta hydrolase fold Swol_1100 PF01464 Transglycosylase SLT domain Swol_1101 PF03129 Anticodon binding domain Swol_1101 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Swol_1101 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Swol_1101 PF02824 TGS domain Swol_1104 PF05164 Cell division protein ZapA Swol_1105 PF14716 Helix-hairpin-helix domain Swol_1105 PF14791 DNA polymerase beta thumb Swol_1105 PF02811 PHP domain Swol_1106 PF04239 Protein of unknown function (DUF421) Swol_1107 PF12392 Collagenase Swol_1107 PF01136 Peptidase family U32 Swol_1108 PF00488 MutS domain V Swol_1108 PF01713 Smr domain Swol_1109 PF00905 Penicillin binding protein transpeptidase domain Swol_1109 PF00912 Transglycosylase Swol_1110 PF00579 tRNA synthetases class I (W and Y) Swol_1110 PF01479 S4 domain Swol_1112 PF00265 Thymidine kinase Swol_1118 PF00873 AcrB/AcrD/AcrF family Swol_1122 PF02735 Ku70/Ku80 beta-barrel domain Swol_1123 PF01068 ATP dependent DNA ligase domain Swol_1123 PF13298 DNA polymerase Ligase (LigD) Swol_1123 PF04679 ATP dependent DNA ligase C terminal region Swol_1124 PF04679 ATP dependent DNA ligase C terminal region Swol_1124 PF13298 DNA polymerase Ligase (LigD) Swol_1124 PF01068 ATP dependent DNA ligase domain Swol_1128 PF05221 S-adenosyl-L-homocysteine hydrolase Swol_1128 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Swol_1132 PF04851 Type III restriction enzyme, res subunit Swol_1132 PF13307 Helicase C-terminal domain Swol_1135 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Swol_1135 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Swol_1136 PF01799 [2Fe-2S] binding domain Swol_1136 PF00111 2Fe-2S iron-sulfur cluster binding domain Swol_1138 PF13478 XdhC Rossmann domain Swol_1138 PF02625 XdhC and CoxI family Swol_1139 PF02535 ZIP Zinc transporter Swol_1142 PF12705 PD-(D/E)XK nuclease superfamily Swol_1144 PF13193 AMP-binding enzyme C-terminal domain Swol_1144 PF00668 Condensation domain Swol_1144 PF00501 AMP-binding enzyme Swol_1144 PF00550 Phosphopantetheine attachment site Swol_1146 PF12705 PD-(D/E)XK nuclease superfamily Swol_1146 PF00580 UvrD/REP helicase N-terminal domain Swol_1146 PF13361 UvrD-like helicase C-terminal domain Swol_1147 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Swol_1147 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Swol_1149 PF10502 Signal peptidase, peptidase S26 Swol_1150 PF01975 Survival protein SurE Swol_1152 PF03764 Elongation factor G, domain IV Swol_1152 PF03144 Elongation factor Tu domain 2 Swol_1152 PF14492 Elongation Factor G, domain II Swol_1152 PF00009 Elongation factor Tu GTP binding domain Swol_1152 PF00679 Elongation factor G C-terminus Swol_1154 PF00924 Mechanosensitive ion channel Swol_1155 PF01820 D-ala D-ala ligase N-terminus Swol_1155 PF07478 D-ala D-ala ligase C-terminus Swol_1157 PF04055 Radical SAM superfamily Swol_1158 PF02621 Menaquinone biosynthesis Swol_1159 PF04055 Radical SAM superfamily Swol_1160 PF01048 Phosphorylase superfamily Swol_1161 PF03699 Uncharacterised protein family (UPF0182) Swol_1164 PF04463 Protein of unknown function (DUF523) Swol_1169 PF13180 PDZ domain Swol_1170 PF00365 Phosphofructokinase Swol_1171 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Swol_1171 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Swol_1173 PF06071 Protein of unknown function (DUF933) Swol_1173 PF01926 50S ribosome-binding GTPase Swol_1174 PF14398 YheC/D like ATP-grasp Swol_1178 PF00999 Sodium/hydrogen exchanger family Swol_1178 PF02254 TrkA-N domain Swol_1180 PF00501 AMP-binding enzyme Swol_1180 PF13193 AMP-binding enzyme C-terminal domain Swol_1185 PF04011 LemA family Swol_1190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Swol_1190 PF03459 TOBE domain Swol_1191 PF03466 LysR substrate binding domain Swol_1191 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Swol_1193 PF05504 Spore germination B3/ GerAC like, C-terminal Swol_1194 PF03323 Bacillus/Clostridium GerA spore germination protein Swol_1198 PF00155 Aminotransferase class I and II Swol_1199 PF17284 Spermidine synthase tetramerisation domain Swol_1201 PF14528 LAGLIDADG-like domain Swol_1201 PF03796 DnaB-like helicase C terminal domain Swol_1201 PF00772 DnaB-like helicase N terminal domain Swol_1203 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Swol_1203 PF10996 Beta-Casp domain Swol_1203 PF00753 Metallo-beta-lactamase superfamily Swol_1205 PF00155 Aminotransferase class I and II Swol_1206 PF01037 Lrp/AsnC ligand binding domain Swol_1207 PF03109 ABC1 family Swol_1209 PF01259 SAICAR synthetase Swol_1210 PF03372 Endonuclease/Exonuclease/phosphatase family Swol_1211 PF10609 NUBPL iron-transfer P-loop NTPase Swol_1214 PF00679 Elongation factor G C-terminus Swol_1214 PF03144 Elongation factor Tu domain 2 Swol_1214 PF00009 Elongation factor Tu GTP binding domain Swol_1214 PF14492 Elongation Factor G, domain II Swol_1214 PF03764 Elongation factor G, domain IV Swol_1216 PF13649 Methyltransferase domain Swol_1219 PF00885 6,7-dimethyl-8-ribityllumazine synthase Swol_1220 PF00925 GTP cyclohydrolase II Swol_1220 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Swol_1221 PF00677 Lumazine binding domain Swol_1222 PF01872 RibD C-terminal domain Swol_1222 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Swol_1223 PF00834 Ribulose-phosphate 3 epimerase family Swol_1224 PF16745 RsgA N-terminal domain Swol_1224 PF03193 RsgA GTPase Swol_1225 PF03793 PASTA domain Swol_1225 PF00069 Protein kinase domain Swol_1227 PF04055 Radical SAM superfamily Swol_1228 PF01189 16S rRNA methyltransferase RsmB/F Swol_1228 PF01029 NusB family Swol_1229 PF04298 Putative neutral zinc metallopeptidase Swol_1231 PF02911 Formyl transferase, C-terminal domain Swol_1231 PF00551 Formyl transferase Swol_1232 PF01327 Polypeptide deformylase Swol_1233 PF18074 Primosomal protein N C-terminal domain Swol_1233 PF04851 Type III restriction enzyme, res subunit Swol_1233 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Swol_1233 PF00271 Helicase conserved C-terminal domain Swol_1233 PF17764 3′ DNA-binding domain (3′BD) Swol_1234 PF00438 S-adenosylmethionine synthetase, N-terminal domain Swol_1234 PF02773 S-adenosylmethionine synthetase, C-terminal domain Swol_1234 PF02772 S-adenosylmethionine synthetase, central domain Swol_1235 PF02441 Flavoprotein Swol_1235 PF04127 DNA / pantothenate metabolism flavoprotein Swol_1236 PF01192 RNA polymerase Rpb6 Swol_1237 PF00625 Guanylate kinase Swol_1238 PF04025 Domain of unknown function (DUF370) Swol_1239 PF03755 YicC-like family, N-terminal region Swol_1239 PF08340 Domain of unknown function (DUF1732) Swol_1240 PF00690 Cation transporter/ATPase, N-terminus Swol_1240 PF00689 Cation transporting ATPase, C-terminus Swol_1241 PF00561 alpha/beta hydrolase fold Swol_1242 PF01575 MaoC like domain Swol_1247 PF00877 NlpC/P60 family Swol_1247 PF01476 LysM domain Swol_1248 PF02811 PHP domain Swol_1250 PF04232 Stage V sporulation protein S (SpoVS) Swol_1251 PF13277 YmdB-like protein Swol_1253 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Swol_1254 PF00013 KH domain Swol_1254 PF01966 HD domain Swol_1254 PF12072 Domain of unknown function (DUF3552) Swol_1255 PF00154 recA bacterial DNA recombination protein Swol_1256 PF02834 LigT like Phosphoesterase Swol_1257 PF02464 Competence-damaged protein Swol_1257 PF18146 Damage-inducible protein CinA KH domain Swol_1257 PF00994 Probable molybdopterin binding domain Swol_1261 PF01066 CDP-alcohol phosphatidyltransferase Swol_1262 PF04055 Radical SAM superfamily Swol_1262 PF18693 TRAM domain Swol_1262 PF00919 Uncharacterized protein family UPF0004 Swol_1264 PF00294 pfkB family carbohydrate kinase Swol_1265 PF01580 FtsK/SpoIIIE family Swol_1265 PF09397 Ftsk gamma domain Swol_1265 PF17854 FtsK alpha domain Swol_1266 PF02673 Bacitracin resistance protein BacA Swol_1267 PF00574 Clp protease Swol_1268 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Swol_1268 PF00753 Metallo-beta-lactamase superfamily Swol_1268 PF17770 Ribonuclease J C-terminal domain Swol_1269 PF00701 Dihydrodipicolinate synthetase family Swol_1270 PF01118 Semialdehyde dehydrogenase, NAD binding domain Swol_1270 PF02774 Semialdehyde dehydrogenase, dimerisation domain Swol_1271 PF02441 Flavoprotein Swol_1272 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Swol_1272 PF16924 Dipicolinate synthase subunit A N-terminal domain Swol_1273 PF01113 Dihydrodipicolinate reductase, N-terminus Swol_1273 PF05173 Dihydrodipicolinate reductase, C-terminus Swol_1277 PF00156 Phosphoribosyl transferase domain Swol_1278 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Swol_1279 PF01180 Dihydroorotate dehydrogenase Swol_1280 PF00970 Oxidoreductase FAD-binding domain Swol_1280 PF00175 Oxidoreductase NAD-binding domain Swol_1280 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Swol_1281 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Swol_1281 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Swol_1281 PF02142 MGS-like domain Swol_1282 PF00117 Glutamine amidotransferase class-I Swol_1282 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Swol_1283 PF01979 Amidohydrolase family Swol_1284 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Swol_1284 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Swol_1285 PF00156 Phosphoribosyl transferase domain Swol_1286 PF01479 S4 domain Swol_1286 PF00849 RNA pseudouridylate synthase Swol_1287 PF01252 Signal peptidase (SPase) II Swol_1289 PF01695 IstB-like ATP binding protein Swol_1290 PF04647 Accessory gene regulator B Swol_1294 PF08369 Proto-chlorophyllide reductase 57 kD subunit Swol_1294 PF00148 Nitrogenase component 1 type Oxidoreductase Swol_1295 PF02082 Transcriptional regulator Swol_1297 PF01934 Protein of unknown function DUF86 Swol_1299 PF02899 Phage integrase, N-terminal SAM-like domain Swol_1299 PF00589 Phage integrase family Swol_1300 PF07992 Pyridine nucleotide-disulphide oxidoreductase Swol_1301 PF01676 Metalloenzyme superfamily Swol_1301 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Swol_1302 PF00291 Pyridoxal-phosphate dependent enzyme Swol_1302 PF14821 Threonine synthase N terminus Swol_1316 PF02899 Phage integrase, N-terminal SAM-like domain Swol_1316 PF00589 Phage integrase family Swol_1317 PF00696 Amino acid kinase family Swol_1317 PF13840 ACT domain Swol_1318 PF08544 GHMP kinases C terminal Swol_1318 PF00288 GHMP kinases N terminal domain Swol_1319 PF01842 ACT domain Swol_1319 PF00742 Homoserine dehydrogenase Swol_1319 PF03447 Homoserine dehydrogenase, NAD binding domain Swol_1320 PF00072 Response regulator receiver domain Swol_1321 PF01966 HD domain Swol_1321 PF00072 Response regulator receiver domain Swol_1322 PF09547 Stage IV sporulation protein A (spore_IV_A) Swol_1323 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Swol_1323 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Swol_1324 PF02660 Glycerol-3-phosphate acyltransferase Swol_1325 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Swol_1325 PF01926 50S ribosome-binding GTPase Swol_1327 PF00486 Transcriptional regulatory protein, C terminal Swol_1327 PF00072 Response regulator receiver domain Swol_1328 PF01627 Hpt domain Swol_1328 PF00072 Response regulator receiver domain Swol_1328 PF00512 His Kinase A (phospho-acceptor) domain Swol_1328 PF17149 Periplasmic sensor domain found in signal transduction proteins Swol_1328 PF00672 HAMP domain Swol_1328 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_1329 PF01339 CheB methylesterase Swol_1329 PF00072 Response regulator receiver domain Swol_1330 PF03705 CheR methyltransferase, all-alpha domain Swol_1330 PF01739 CheR methyltransferase, SAM binding domain Swol_1331 PF02203 Tar ligand binding domain homologue Swol_1331 PF00672 HAMP domain Swol_1331 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Swol_1332 PF01584 CheW-like domain Swol_1332 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_1332 PF01627 Hpt domain Swol_1332 PF02895 Signal transducing histidine kinase, homodimeric domain Swol_1332 PF07194 P2 response regulator binding domain Swol_1333 PF00072 Response regulator receiver domain Swol_1334 PF02909 Tetracyclin repressor-like, C-terminal domain Swol_1334 PF00440 Bacterial regulatory proteins, tetR family Swol_1338 PF14045 YIEGIA protein Swol_1341 PF01070 FMN-dependent dehydrogenase Swol_1344 PF02401 LytB protein Swol_1344 PF00575 S1 RNA binding domain Swol_1346 PF02224 Cytidylate kinase Swol_1347 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Swol_1348 PF18152 DAHP synthase ferredoxin-like domain Swol_1348 PF00793 DAHP synthetase I family Swol_1349 PF02153 Prephenate dehydrogenase Swol_1349 PF01842 ACT domain Swol_1350 PF02875 Mur ligase family, glutamate ligase domain Swol_1350 PF08443 RimK-like ATP-grasp domain Swol_1350 PF08245 Mur ligase middle domain Swol_1351 PF03575 Peptidase family S51 Swol_1352 PF01979 Amidohydrolase family Swol_1353 PF01266 FAD dependent oxidoreductase Swol_1353 PF00355 Rieske [2Fe-2S] domain Swol_1354 PF07690 Major Facilitator Superfamily Swol_1355 PF01575 MaoC like domain Swol_1356 PF01575 MaoC like domain Swol_1357 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Swol_1357 PF01276 Orn/Lys/Arg decarboxylase, major domain Swol_1363 PF08279 HTH domain Swol_1363 PF13280 WYL domain Swol_1367 PF00005 ABC transporter Swol_1373 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Swol_1374 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Swol_1375 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Swol_1375 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Swol_1377 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Swol_1381 PF00793 DAHP synthetase I family Swol_1381 PF18152 DAHP synthase ferredoxin-like domain Swol_1382 PF00392 Bacterial regulatory proteins, gntR family Swol_1383 PF00005 ABC transporter Swol_1388 PF00793 DAHP synthetase I family Swol_1388 PF18152 DAHP synthase ferredoxin-like domain Swol_1390 PF00392 Bacterial regulatory proteins, gntR family Swol_1390 PF00155 Aminotransferase class I and II Swol_1393 PF00795 Carbon-nitrogen hydrolase Swol_1395 PF07736 Chorismate mutase type I Swol_1403 PF08668 HDOD domain Swol_1406 PF01479 S4 domain Swol_1406 PF00849 RNA pseudouridylate synthase Swol_1408 PF01227 GTP cyclohydrolase I Swol_1409 PF01268 Formate--tetrahydrofolate ligase Swol_1412 PF07670 Nucleoside recognition Swol_1413 PF07670 Nucleoside recognition Swol_1414 PF09579 Sporulation protein YtfJ (Spore_YtfJ) Swol_1415 PF11167 Protein of unknown function (DUF2953) Swol_1417 PF04079 Segregation and condensation complex subunit ScpB Swol_1418 PF02616 Segregation and condensation protein ScpA Swol_1419 PF02163 Peptidase family M50 Swol_1420 PF01743 Poly A polymerase head domain Swol_1420 PF13735 tRNA nucleotidyltransferase domain 2 putative Swol_1420 PF12627 Probable RNA and SrmB- binding site of polymerase A Swol_1422 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Swol_1422 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Swol_1424 PF02355 Protein export membrane protein Swol_1424 PF07549 SecD/SecF GG Motif Swol_1425 PF07549 SecD/SecF GG Motif Swol_1425 PF02355 Protein export membrane protein Swol_1427 PF02699 Preprotein translocase subunit Swol_1428 PF01702 Queuine tRNA-ribosyltransferase Swol_1429 PF02547 Queuosine biosynthesis protein Swol_1430 PF02677 Epoxyqueuosine reductase QueH Swol_1431 PF17864 RuvB AAA lid domain Swol_1431 PF05491 RuvB C-terminal winged helix domain Swol_1431 PF05496 Holliday junction DNA helicase RuvB P-loop domain Swol_1432 PF01330 RuvA N terminal domain Swol_1432 PF07499 RuvA, C-terminal domain Swol_1433 PF02075 Crossover junction endodeoxyribonuclease RuvC Swol_1435 PF01709 Transcriptional regulator Swol_1436 PF07298 NnrU protein Swol_1437 PF02540 NAD synthase Swol_1438 PF00291 Pyridoxal-phosphate dependent enzyme Swol_1442 PF02310 B12 binding domain Swol_1442 PF02965 Vitamin B12 dependent methionine synthase, activation domain Swol_1442 PF02607 B12 binding domain Swol_1442 PF02574 Homocysteine S-methyltransferase Swol_1442 PF00809 Pterin binding enzyme Swol_1443 PF02416 mttA/Hcf106 family Swol_1445 PF01078 Magnesium chelatase, subunit ChlI Swol_1445 PF13335 Magnesium chelatase, subunit ChlI C-terminal Swol_1446 PF13690 Chemotaxis phosphatase CheX Swol_1448 PF00072 Response regulator receiver domain Swol_1449 PF01339 CheB methylesterase Swol_1449 PF00072 Response regulator receiver domain Swol_1450 PF01584 CheW-like domain Swol_1451 PF00672 HAMP domain Swol_1451 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Swol_1451 PF12729 Four helix bundle sensory module for signal transduction Swol_1452 PF00012 Hsp70 protein Swol_1454 PF13614 AAA domain Swol_1455 PF01627 Hpt domain Swol_1455 PF07194 P2 response regulator binding domain Swol_1455 PF02895 Signal transducing histidine kinase, homodimeric domain Swol_1455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_1455 PF01584 CheW-like domain Swol_1457 PF01739 CheR methyltransferase, SAM binding domain Swol_1457 PF03705 CheR methyltransferase, all-alpha domain Swol_1463 PF01555 DNA methylase Swol_1463 PF18273 Type III R-M EcoP15I C-terminal domain Swol_1468 PF03109 ABC1 family Swol_1469 PF00072 Response regulator receiver domain Swol_1469 PF01966 HD domain Swol_1472 PF00005 ABC transporter Swol_1474 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Swol_1474 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Swol_1475 PF02021 Uncharacterised protein family UPF0102 Swol_1476 PF01312 FlhB HrpN YscU SpaS Family Swol_1478 PF01351 Ribonuclease HII Swol_1479 PF07992 Pyridine nucleotide-disulphide oxidoreductase Swol_1479 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Swol_1481 PF01144 Coenzyme A transferase Swol_1483 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Swol_1483 PF02770 Acyl-CoA dehydrogenase, middle domain Swol_1483 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Swol_1484 PF00378 Enoyl-CoA hydratase/isomerase Swol_1485 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Swol_1485 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Swol_1486 PF00108 Thiolase, N-terminal domain Swol_1486 PF02803 Thiolase, C-terminal domain Swol_1487 PF02954 Bacterial regulatory protein, Fis family Swol_1487 PF00158 Sigma-54 interaction domain Swol_1487 PF00989 PAS fold Swol_1489 PF09587 Bacterial capsule synthesis protein PGA_cap Swol_1490 PF01926 50S ribosome-binding GTPase Swol_1491 PF01245 Ribosomal protein L19 Swol_1492 PF09936 SAM-dependent RNA methyltransferase Swol_1493 PF01746 tRNA (Guanine-1)-methyltransferase Swol_1494 PF01782 RimM N-terminal domain Swol_1494 PF05239 PRC-barrel domain Swol_1497 PF00886 Ribosomal protein S16 Swol_1498 PF02881 SRP54-type protein, helical bundle domain Swol_1498 PF00448 SRP54-type protein, GTPase domain Swol_1498 PF02978 Signal peptide binding domain Swol_1499 PF04297 Putative helix-turn-helix protein, YlxM / p13 like Swol_1500 PF02645 Uncharacterised protein, DegV family COG1307 Swol_1502 PF11871 Domain of unknown function (DUF3391) Swol_1502 PF01966 HD domain Swol_1504 PF01966 HD domain Swol_1504 PF11871 Domain of unknown function (DUF3391) Swol_1505 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 Swol_1507 PF00140 Sigma-70 factor, region 1.2 Swol_1507 PF04539 Sigma-70 region 3 Swol_1507 PF03979 Sigma-70 factor, region 1.1 Swol_1507 PF04545 Sigma-70, region 4 Swol_1507 PF04542 Sigma-70 region 2 Swol_1508 PF10410 DnaB-helicase binding domain of primase Swol_1508 PF01807 CHC2 zinc finger Swol_1508 PF08275 DNA primase catalytic core, N-terminal domain Swol_1509 PF13286 Phosphohydrolase-associated domain Swol_1509 PF01966 HD domain Swol_1512 PF00391 PEP-utilising enzyme, mobile domain Swol_1512 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Swol_1512 PF02896 PEP-utilising enzyme, TIM barrel domain Swol_1513 PF03618 Kinase/pyrophosphorylase Swol_1514 PF08279 HTH domain Swol_1514 PF00571 CBS domain Swol_1515 PF02092 Glycyl-tRNA synthetase beta subunit Swol_1515 PF05746 DALR anticodon binding domain Swol_1516 PF02091 Glycyl-tRNA synthetase alpha subunit Swol_1519 PF01578 Cytochrome C assembly protein Swol_1520 PF05140 ResB-like family Swol_1521 PF02335 Cytochrome c552 Swol_1523 PF00881 Nitroreductase family Swol_1525 PF09335 SNARE associated Golgi protein Swol_1538 PF07670 Nucleoside recognition Swol_1538 PF07664 Ferrous iron transport protein B C terminus Swol_1538 PF02421 Ferrous iron transport protein B Swol_1538 PF17910 FeoB cytosolic helical domain Swol_1539 PF07664 Ferrous iron transport protein B C terminus Swol_1539 PF07670 Nucleoside recognition Swol_1539 PF02421 Ferrous iron transport protein B Swol_1539 PF17910 FeoB cytosolic helical domain Swol_1541 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system Swol_1547 PF04851 Type III restriction enzyme, res subunit Swol_1547 PF08774 VRR-NUC domain Swol_1548 PF01555 DNA methylase Swol_1548 PF18273 Type III R-M EcoP15I C-terminal domain Swol_1554 PF00005 ABC transporter Swol_1554 PF08402 TOBE domain Swol_1555 PF00528 Binding-protein-dependent transport system inner membrane component Swol_1557 PF12727 PBP superfamily domain Swol_1558 PF11967 Recombination protein O N terminal Swol_1558 PF02565 Recombination protein O C terminal Swol_1560 PF01791 DeoC/LacD family aldolase Swol_1561 PF07650 KH domain Swol_1561 PF01926 50S ribosome-binding GTPase Swol_1562 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Swol_1563 PF01219 Prokaryotic diacylglycerol kinase Swol_1564 PF02130 Uncharacterized protein family UPF0054 Swol_1565 PF07698 7TM receptor with intracellular HD hydrolase Swol_1565 PF07697 7TM-HD extracellular Swol_1565 PF01966 HD domain Swol_1566 PF02562 PhoH-like protein Swol_1568 PF07873 YabP family Swol_1572 PF01230 HIT domain Swol_1573 PF01165 Ribosomal protein S21 Swol_1574 PF00919 Uncharacterized protein family UPF0004 Swol_1574 PF04055 Radical SAM superfamily Swol_1574 PF01938 TRAM domain Swol_1575 PF04452 RNA methyltransferase Swol_1578 PF00012 Hsp70 protein Swol_1579 PF01025 GrpE Swol_1581 PF01628 HrcA protein C terminal domain Swol_1582 PF04055 Radical SAM superfamily Swol_1583 PF03144 Elongation factor Tu domain 2 Swol_1583 PF00009 Elongation factor Tu GTP binding domain Swol_1583 PF06421 GTP-binding protein LepA C-terminus Swol_1583 PF00679 Elongation factor G C-terminus Swol_1584 PF03023 Lipid II flippase MurJ Swol_1587 PF01649 Ribosomal protein S20 Swol_1589 PF03061 Thioesterase superfamily Swol_1590 PF03471 Transporter associated domain Swol_1590 PF00999 Sodium/hydrogen exchanger family Swol_1590 PF02080 TrkA-C domain Swol_1591 PF01979 Amidohydrolase family Swol_1593 PF01979 Amidohydrolase family Swol_1594 PF02872 5'-nucleotidase, C-terminal domain Swol_1594 PF00149 Calcineurin-like phosphoesterase Swol_1595 PF00753 Metallo-beta-lactamase superfamily Swol_1595 PF13567 Domain of unknown function (DUF4131) Swol_1595 PF03772 Competence protein Swol_1598 PF13302 Acetyltransferase (GNAT) domain Swol_1598 PF00027 Cyclic nucleotide-binding domain Swol_1599 PF13603 Leucyl-tRNA synthetase, Domain 2 Swol_1599 PF09334 tRNA synthetases class I (M) Swol_1599 PF00133 tRNA synthetases class I (I, L, M and V) Swol_1599 PF08264 Anticodon-binding domain of tRNA Swol_1600 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Swol_1600 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Swol_1602 PF01966 HD domain Swol_1603 PF01467 Cytidylyltransferase-like Swol_1605 PF00291 Pyridoxal-phosphate dependent enzyme Swol_1607 PF00171 Aldehyde dehydrogenase family Swol_1608 PF01472 PUA domain Swol_1608 PF00696 Amino acid kinase family Swol_1609 PF09269 Domain of unknown function (DUF1967) Swol_1609 PF01018 GTP1/OBG Swol_1609 PF01926 50S ribosome-binding GTPase Swol_1611 PF01016 Ribosomal L27 protein Swol_1612 PF04327 Cysteine protease Prp Swol_1613 PF00829 Ribosomal prokaryotic L21 protein Swol_1614 PF10150 Ribonuclease E/G family Swol_1614 PF00575 S1 RNA binding domain Swol_1616 PF00919 Uncharacterized protein family UPF0004 Swol_1616 PF01938 TRAM domain Swol_1616 PF04055 Radical SAM superfamily Swol_1617 PF00571 CBS domain Swol_1617 PF02163 Peptidase family M50 Swol_1620 PF00005 ABC transporter Swol_1621 PF00392 Bacterial regulatory proteins, gntR family Swol_1622 PF00990 Diguanylate cyclase, GGDEF domain Swol_1622 PF01590 GAF domain Swol_1622 PF00563 EAL domain Swol_1622 PF00360 Phytochrome region Swol_1626 PF00465 Iron-containing alcohol dehydrogenase Swol_1628 PF05683 Fumarase C-terminus Swol_1629 PF05681 Fumarate hydratase (Fumerase) Swol_1630 PF12849 PBP superfamily domain Swol_1631 PF00005 ABC transporter Swol_1632 PF00528 Binding-protein-dependent transport system inner membrane component Swol_1634 PF01098 Cell cycle protein Swol_1635 PF03776 Septum formation topological specificity factor MinE Swol_1636 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Swol_1637 PF03775 Septum formation inhibitor MinC, C-terminal domain Swol_1638 PF03717 Penicillin-binding Protein dimerisation domain Swol_1638 PF00905 Penicillin binding protein transpeptidase domain Swol_1642 PF04002 RadC-like JAB domain Swol_1643 PF02545 Maf-like protein Swol_1645 PF02629 CoA binding domain Swol_1645 PF06971 Putative DNA-binding protein N-terminus Swol_1646 PF01384 Phosphate transporter family Swol_1648 PF02875 Mur ligase family, glutamate ligase domain Swol_1648 PF08245 Mur ligase middle domain Swol_1649 PF08264 Anticodon-binding domain of tRNA Swol_1649 PF00133 tRNA synthetases class I (I, L, M and V) Swol_1649 PF10458 Valyl tRNA synthetase tRNA binding arm Swol_1651 PF07517 SecA DEAD-like domain Swol_1651 PF01043 SecA preprotein cross-linking domain Swol_1651 PF02810 SEC-C motif Swol_1651 PF07516 SecA Wing and Scaffold domain Swol_1652 PF01926 50S ribosome-binding GTPase Swol_1653 PF02190 ATP-dependent protease La (LON) substrate-binding domain Swol_1653 PF05362 Lon protease (S16) C-terminal proteolytic domain Swol_1653 PF00004 ATPase family associated with various cellular activities (AAA) Swol_1654 PF00004 ATPase family associated with various cellular activities (AAA) Swol_1654 PF05362 Lon protease (S16) C-terminal proteolytic domain Swol_1655 PF06689 ClpX C4-type zinc finger Swol_1655 PF07724 AAA domain (Cdc48 subfamily) Swol_1655 PF10431 C-terminal, D2-small domain, of ClpB protein Swol_1656 PF00574 Clp protease Swol_1657 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Swol_1657 PF05697 Bacterial trigger factor protein (TF) Swol_1657 PF05698 Bacterial trigger factor protein (TF) C-terminus Swol_1659 PF01145 SPFH domain / Band 7 family Swol_1663 PF03734 L,D-transpeptidase catalytic domain Swol_1663 PF01476 LysM domain Swol_1667 PF12146 Serine aminopeptidase, S33 Swol_1668 PF01966 HD domain Swol_1671 PF01741 Large-conductance mechanosensitive channel, MscL Swol_1675 PF01497 Periplasmic binding protein Swol_1680 PF00672 HAMP domain Swol_1680 PF00512 His Kinase A (phospho-acceptor) domain Swol_1680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_1681 PF00486 Transcriptional regulatory protein, C terminal Swol_1681 PF00072 Response regulator receiver domain Swol_1683 PF00005 ABC transporter Swol_1683 PF12704 MacB-like periplasmic core domain Swol_1683 PF02687 FtsX-like permease family Swol_1686 PF05175 Methyltransferase small domain Swol_1686 PF08468 Methyltransferase small domain N-terminal Swol_1693 PF00994 Probable molybdopterin binding domain Swol_1693 PF03453 MoeA N-terminal region (domain I and II) Swol_1693 PF03454 MoeA C-terminal region (domain IV) Swol_1694 PF00005 ABC transporter Swol_1697 PF00403 Heavy-metal-associated domain Swol_1698 PF00403 Heavy-metal-associated domain Swol_1699 PF02954 Bacterial regulatory protein, Fis family Swol_1699 PF13426 PAS domain Swol_1699 PF00158 Sigma-54 interaction domain Swol_1701 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Swol_1701 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Swol_1701 PF00037 4Fe-4S binding domain Swol_1703 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Swol_1703 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Swol_1704 PF12800 4Fe-4S binding domain Swol_1704 PF13247 4Fe-4S dicluster domain Swol_1706 PF00899 ThiF family Swol_1709 PF01348 Type II intron maturase Swol_1709 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Swol_1710 PF13567 Domain of unknown function (DUF4131) Swol_1710 PF00753 Metallo-beta-lactamase superfamily Swol_1710 PF03772 Competence protein Swol_1711 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Swol_1711 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Swol_1712 PF02706 Chain length determinant protein Swol_1712 PF13807 G-rich domain on putative tyrosine kinase Swol_1715 PF12704 MacB-like periplasmic core domain Swol_1715 PF02687 FtsX-like permease family Swol_1715 PF00005 ABC transporter Swol_1717 PF07584 Aerotolerance regulator N-terminal Swol_1717 PF00092 von Willebrand factor type A domain Swol_1719 PF07726 ATPase family associated with various cellular activities (AAA) Swol_1719 PF17863 AAA lid domain Swol_1723 PF00005 ABC transporter Swol_1727 PF00107 Zinc-binding dehydrogenase Swol_1727 PF08240 Alcohol dehydrogenase GroES-like domain Swol_1727 PF13823 Alcohol dehydrogenase GroES-associated Swol_1730 PF13476 AAA domain Swol_1731 PF00149 Calcineurin-like phosphoesterase Swol_1731 PF12320 Type 5 capsule protein repressor C-terminal domain Swol_1732 PF01471 Putative peptidoglycan binding domain Swol_1732 PF03572 Peptidase family S41 Swol_1732 PF17820 PDZ domain Swol_1733 PF00557 Metallopeptidase family M24 Swol_1735 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Swol_1735 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Swol_1736 PF00528 Binding-protein-dependent transport system inner membrane component Swol_1737 PF00571 CBS domain Swol_1737 PF00005 ABC transporter Swol_1739 PF00528 Binding-protein-dependent transport system inner membrane component Swol_1740 PF00005 ABC transporter Swol_1744 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Swol_1744 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Swol_1749 PF01867 CRISPR associated protein Cas1 Swol_1749 PF01930 Domain of unknown function DUF83 Swol_1751 PF10040 CRISPR-associated endoribonuclease Cas6 Swol_1752 PF03787 RAMP superfamily Swol_1753 PF17953 CRISPR Csm4 C-terminal domain Swol_1754 PF03787 RAMP superfamily Swol_1755 PF03750 Csm2 Type III-A Swol_1756 PF18211 Csm1 subunit domain B Swol_1758 PF04239 Protein of unknown function (DUF421) Swol_1760 PF00753 Metallo-beta-lactamase superfamily Swol_1763 PF00571 CBS domain Swol_1763 PF01595 Cyclin M transmembrane N-terminal domain Swol_1763 PF03471 Transporter associated domain Swol_1764 PF01502 Phosphoribosyl-AMP cyclohydrolase Swol_1764 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Swol_1765 PF00977 Histidine biosynthesis protein Swol_1766 PF00977 Histidine biosynthesis protein Swol_1767 PF00475 Imidazoleglycerol-phosphate dehydratase Swol_1768 PF00815 Histidinol dehydrogenase Swol_1769 PF01634 ATP phosphoribosyltransferase Swol_1770 PF13393 Histidyl-tRNA synthetase Swol_1771 PF01371 Trp repressor protein Swol_1774 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Swol_1774 PF02844 Phosphoribosylglycinamide synthetase, N domain Swol_1774 PF02843 Phosphoribosylglycinamide synthetase, C domain Swol_1775 PF02142 MGS-like domain Swol_1775 PF01808 AICARFT/IMPCHase bienzyme Swol_1776 PF00551 Formyl transferase Swol_1777 PF02769 AIR synthase related protein, C-terminal domain Swol_1777 PF00586 AIR synthase related protein, N-terminal domain Swol_1778 PF00156 Phosphoribosyl transferase domain Swol_1779 PF10397 Adenylosuccinate lyase C-terminus Swol_1779 PF00206 Lyase Swol_1780 PF00731 AIR carboxylase Swol_1784 PF02540 NAD synthase Swol_1784 PF00117 Glutamine amidotransferase class-I Swol_1784 PF00958 GMP synthase C terminal domain Swol_1787 PF03951 Glutamine synthetase, beta-Grasp domain Swol_1787 PF00120 Glutamine synthetase, catalytic domain Swol_1793 PF07228 Stage II sporulation protein E (SpoIIE) Swol_1793 PF00672 HAMP domain Swol_1795 PF01740 STAS domain Swol_1802 PF09827 CRISPR associated protein Cas2 Swol_1803 PF01867 CRISPR associated protein Cas1 Swol_1805 PF17757 UvrB interaction domain Swol_1805 PF02151 UvrB/uvrC motif Swol_1805 PF00271 Helicase conserved C-terminal domain Swol_1805 PF12344 Ultra-violet resistance protein B Swol_1805 PF04851 Type III restriction enzyme, res subunit Swol_1811 PF00155 Aminotransferase class I and II Swol_1813 PF01743 Poly A polymerase head domain Swol_1813 PF13735 tRNA nucleotidyltransferase domain 2 putative Swol_1813 PF12627 Probable RNA and SrmB- binding site of polymerase A Swol_1815 PF13478 XdhC Rossmann domain Swol_1815 PF02625 XdhC and CoxI family Swol_1816 PF12804 MobA-like NTP transferase domain Swol_1816 PF00132 Bacterial transferase hexapeptide (six repeats) Swol_1817 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Swol_1817 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Swol_1818 PF01799 [2Fe-2S] binding domain Swol_1818 PF00111 2Fe-2S iron-sulfur cluster binding domain Swol_1819 PF00941 FAD binding domain in molybdopterin dehydrogenase Swol_1819 PF03450 CO dehydrogenase flavoprotein C-terminal domain Swol_1821 PF12728 Helix-turn-helix domain Swol_1821 PF12727 PBP superfamily domain Swol_1824 PF13247 4Fe-4S dicluster domain Swol_1824 PF09163 Formate dehydrogenase N, transmembrane Swol_1825 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Swol_1825 PF00384 Molybdopterin oxidoreductase Swol_1825 PF01568 Molydopterin dinucleotide binding domain Swol_1826 PF00384 Molybdopterin oxidoreductase Swol_1826 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Swol_1826 PF01568 Molydopterin dinucleotide binding domain Swol_1827 PF03453 MoeA N-terminal region (domain I and II) Swol_1827 PF03454 MoeA C-terminal region (domain IV) Swol_1827 PF00994 Probable molybdopterin binding domain Swol_1828 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Swol_1828 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Swol_1828 PF00037 4Fe-4S binding domain Swol_1830 PF01568 Molydopterin dinucleotide binding domain Swol_1830 PF00384 Molybdopterin oxidoreductase Swol_1830 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Swol_1831 PF12838 4Fe-4S dicluster domain Swol_1831 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Swol_1831 PF00384 Molybdopterin oxidoreductase Swol_1831 PF01568 Molydopterin dinucleotide binding domain Swol_1831 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Swol_1832 PF13247 4Fe-4S dicluster domain Swol_1832 PF12800 4Fe-4S binding domain Swol_1833 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Swol_1833 PF07992 Pyridine nucleotide-disulphide oxidoreductase Swol_1839 PF11954 Domain of unknown function (DUF3471) Swol_1839 PF00144 Beta-lactamase Swol_1840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Swol_1841 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Swol_1841 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Swol_1841 PF02770 Acyl-CoA dehydrogenase, middle domain Swol_1844 PF00149 Calcineurin-like phosphoesterase Swol_1845 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Swol_1846 PF01039 Carboxyl transferase domain Swol_1846 PF17848 Acetyl-coA carboxylase zinc finger domain Swol_1847 PF07977 FabA-like domain Swol_1848 PF00109 Beta-ketoacyl synthase, N-terminal domain Swol_1848 PF02801 Beta-ketoacyl synthase, C-terminal domain Swol_1849 PF00550 Phosphopantetheine attachment site Swol_1851 PF00698 Acyl transferase domain Swol_1852 PF03060 Nitronate monooxygenase Swol_1853 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Swol_1853 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Swol_1854 PF03060 Nitronate monooxygenase Swol_1855 PF00118 TCP-1/cpn60 chaperonin family Swol_1856 PF00166 Chaperonin 10 Kd subunit Swol_1857 PF00994 Probable molybdopterin binding domain Swol_1859 PF01967 MoaC family Swol_1860 PF04055 Radical SAM superfamily Swol_1860 PF06463 Molybdenum Cofactor Synthesis C Swol_1863 PF01145 SPFH domain / Band 7 family Swol_1864 PF01812 5-formyltetrahydrofolate cyclo-ligase family Swol_1865 PF01790 Prolipoprotein diacylglyceryl transferase Swol_1866 PF00814 Glycoprotease family Swol_1867 PF00583 Acetyltransferase (GNAT) family Swol_1868 PF00814 Glycoprotease family Swol_1869 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Swol_1870 PF03167 Uracil DNA glycosylase superfamily Swol_1871 PF01476 LysM domain Swol_1871 PF00704 Glycosyl hydrolases family 18 Swol_1872 PF13382 Adenine deaminase C-terminal domain Swol_1872 PF01979 Amidohydrolase family Swol_1876 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system Swol_1878 PF07722 Peptidase C26 Swol_1879 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system Swol_1880 PF01402 Ribbon-helix-helix protein, copG family Swol_1882 PF01168 Alanine racemase, N-terminal domain Swol_1882 PF00842 Alanine racemase, C-terminal domain Swol_1883 PF00478 IMP dehydrogenase / GMP reductase domain Swol_1883 PF00571 CBS domain Swol_1884 PF03853 YjeF-related protein N-terminus Swol_1884 PF01256 Carbohydrate kinase Swol_1885 PF01648 4'-phosphopantetheinyl transferase superfamily Swol_1886 PF01584 CheW-like domain Swol_1888 PF01476 LysM domain Swol_1888 PF03734 L,D-transpeptidase catalytic domain Swol_1889 PF00950 ABC 3 transport family Swol_1890 PF00005 ABC transporter Swol_1891 PF01297 Zinc-uptake complex component A periplasmic Swol_1893 PF09335 SNARE associated Golgi protein Swol_1894 PF11871 Domain of unknown function (DUF3391) Swol_1894 PF01966 HD domain Swol_1897 PF00270 DEAD/DEAH box helicase Swol_1897 PF00271 Helicase conserved C-terminal domain Swol_1900 PF00534 Glycosyl transferases group 1 Swol_1900 PF00862 Sucrose synthase Swol_1901 PF02645 Uncharacterised protein, DegV family COG1307 Swol_1902 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Swol_1902 PF07992 Pyridine nucleotide-disulphide oxidoreductase Swol_1904 PF03006 Haemolysin-III related Swol_1907 PF00692 dUTPase Swol_1908 PF00535 Glycosyl transferase family 2 Swol_1909 PF01348 Type II intron maturase Swol_1909 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Swol_1912 PF00266 Aminotransferase class-V Swol_1913 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Swol_1913 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Swol_1914 PF01050 Mannose-6-phosphate isomerase Swol_1914 PF00483 Nucleotidyl transferase Swol_1915 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Swol_1915 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Swol_1915 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Swol_1915 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Swol_1918 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_1918 PF00989 PAS fold Swol_1918 PF13188 PAS domain Swol_1918 PF13426 PAS domain Swol_1918 PF00512 His Kinase A (phospho-acceptor) domain Swol_1919 PF04041 beta-1,4-mannooligosaccharide phosphorylase Swol_1920 PF01432 Peptidase family M3 Swol_1920 PF08439 Oligopeptidase F Swol_1921 PF03816 Cell envelope-related transcriptional attenuator domain Swol_1922 PF16360 GTP-binding GTPase Middle Region Swol_1922 PF01926 50S ribosome-binding GTPase Swol_1922 PF13167 GTP-binding GTPase N-terminal Swol_1925 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Swol_1925 PF02256 Iron hydrogenase small subunit Swol_1925 PF02906 Iron only hydrogenase large subunit, C-terminal domain Swol_1925 PF00037 4Fe-4S binding domain Swol_1926 PF02906 Iron only hydrogenase large subunit, C-terminal domain Swol_1926 PF00037 4Fe-4S binding domain Swol_1926 PF02256 Iron hydrogenase small subunit Swol_1926 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Swol_1931 PF02954 Bacterial regulatory protein, Fis family Swol_1931 PF00989 PAS fold Swol_1931 PF00158 Sigma-54 interaction domain Swol_1932 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Swol_1932 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Swol_1933 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Swol_1933 PF12806 Acetyl-CoA dehydrogenase C-terminal like Swol_1933 PF02770 Acyl-CoA dehydrogenase, middle domain Swol_1933 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Swol_1934 PF02803 Thiolase, C-terminal domain Swol_1934 PF00108 Thiolase, N-terminal domain Swol_1935 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Swol_1935 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Swol_1936 PF00378 Enoyl-CoA hydratase/isomerase Swol_1938 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_1938 PF00512 His Kinase A (phospho-acceptor) domain Swol_1938 PF00989 PAS fold Swol_1938 PF13188 PAS domain Swol_1938 PF13426 PAS domain Swol_1942 PF16363 GDP-mannose 4,6 dehydratase Swol_1945 PF01869 BadF/BadG/BcrA/BcrD ATPase family Swol_1947 PF02361 Cobalt transport protein Swol_1948 PF00005 ABC transporter Swol_1949 PF00005 ABC transporter Swol_1951 PF00005 ABC transporter Swol_1952 PF00005 ABC transporter Swol_1956 PF02424 ApbE family Swol_1967 PF00395 S-layer homology domain Swol_1967 PF02903 Alpha amylase, N-terminal ig-like domain Swol_1967 PF00128 Alpha amylase, catalytic domain Swol_1974 PF10437 Bacterial lipoate protein ligase C-terminus Swol_1974 PF03099 Biotin/lipoate A/B protein ligase family Swol_1977 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Swol_1978 PF07992 Pyridine nucleotide-disulphide oxidoreductase Swol_1978 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Swol_1980 PF02347 Glycine cleavage system P-protein Swol_1981 PF02347 Glycine cleavage system P-protein Swol_1982 PF01597 Glycine cleavage H-protein Swol_1983 PF08669 Glycine cleavage T-protein C-terminal barrel domain Swol_1983 PF01571 Aminomethyltransferase folate-binding domain Swol_1994 PF02586 SOS response associated peptidase (SRAP) Swol_1995 PF01894 Uncharacterised protein family UPF0047 Swol_1997 PF13581 Histidine kinase-like ATPase domain Swol_2004 PF01381 Helix-turn-helix Swol_2010 PF00271 Helicase conserved C-terminal domain Swol_2010 PF00176 SNF2 family N-terminal domain Swol_2012 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Swol_2013 PF14718 Soluble lytic murein transglycosylase L domain Swol_2013 PF01464 Transglycosylase SLT domain Swol_2014 PF01121 Dephospho-CoA kinase Swol_2015 PF02659 Putative manganese efflux pump Swol_2016 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Swol_2016 PF06827 Zinc finger found in FPG and IleRS Swol_2016 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Swol_2017 PF00476 DNA polymerase family A Swol_2017 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Swol_2017 PF01367 5'-3' exonuclease, C-terminal SAM fold Swol_2019 PF08281 Sigma-70, region 4 Swol_2019 PF04542 Sigma-70 region 2 Swol_2020 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) Swol_2021 PF03576 Peptidase family S58 Swol_2023 PF13181 Tetratricopeptide repeat Swol_2023 PF00535 Glycosyl transferase family 2 Swol_2027 PF01624 MutS domain I Swol_2027 PF05188 MutS domain II Swol_2027 PF05192 MutS domain III Swol_2027 PF05190 MutS family domain IV Swol_2027 PF00488 MutS domain V Swol_2029 PF02954 Bacterial regulatory protein, Fis family Swol_2029 PF00158 Sigma-54 interaction domain Swol_2029 PF13426 PAS domain Swol_2030 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Swol_2030 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Swol_2031 PF00378 Enoyl-CoA hydratase/isomerase Swol_2033 PF01381 Helix-turn-helix Swol_2034 PF04993 TfoX N-terminal domain Swol_2034 PF04994 TfoX C-terminal domain Swol_2038 PF00005 ABC transporter Swol_2040 PF00391 PEP-utilising enzyme, mobile domain Swol_2040 PF00224 Pyruvate kinase, barrel domain Swol_2040 PF02887 Pyruvate kinase, alpha/beta domain Swol_2041 PF00365 Phosphofructokinase Swol_2042 PF02081 Tryptophan RNA-binding attenuator protein Swol_2043 PF14579 Helix-hairpin-helix motif Swol_2043 PF01336 OB-fold nucleic acid binding domain Swol_2043 PF07733 Bacterial DNA polymerase III alpha NTPase domain Swol_2043 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Swol_2043 PF02811 PHP domain Swol_2044 PF04073 Aminoacyl-tRNA editing domain Swol_2046 PF13419 Haloacid dehalogenase-like hydrolase Swol_2051 PF00108 Thiolase, N-terminal domain Swol_2051 PF02803 Thiolase, C-terminal domain Swol_2052 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Swol_2052 PF02770 Acyl-CoA dehydrogenase, middle domain Swol_2052 PF12806 Acetyl-CoA dehydrogenase C-terminal like Swol_2053 PF02954 Bacterial regulatory protein, Fis family Swol_2053 PF00989 PAS fold Swol_2053 PF00158 Sigma-54 interaction domain Swol_2054 PF00258 Flavodoxin Swol_2054 PF00753 Metallo-beta-lactamase superfamily Swol_2058 PF08281 Sigma-70, region 4 Swol_2058 PF04542 Sigma-70 region 2 Swol_2060 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain Swol_2060 PF07228 Stage II sporulation protein E (SpoIIE) Swol_2062 PF01740 STAS domain Swol_2064 PF03062 MBOAT, membrane-bound O-acyltransferase family Swol_2065 PF00196 Bacterial regulatory proteins, luxR family Swol_2065 PF00072 Response regulator receiver domain Swol_2067 PF00004 ATPase family associated with various cellular activities (AAA) Swol_2067 PF17866 AAA lid domain Swol_2071 PF13411 MerR HTH family regulatory protein Swol_2075 PF00271 Helicase conserved C-terminal domain Swol_2075 PF00176 SNF2 family N-terminal domain Swol_2079 PF00665 Integrase core domain Swol_2079 PF13333 Integrase core domain Swol_2083 PF01925 Sulfite exporter TauE/SafE Swol_2085 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain Swol_2085 PF13538 UvrD-like helicase C-terminal domain Swol_2085 PF14490 Helix-hairpin-helix containing domain Swol_2087 PF01022 Bacterial regulatory protein, arsR family Swol_2090 PF02001 Protein of unknown function DUF134 Swol_2091 PF03600 Citrate transporter Swol_2092 PF00990 Diguanylate cyclase, GGDEF domain Swol_2092 PF08448 PAS fold Swol_2093 PF00155 Aminotransferase class I and II Swol_2094 PF00005 ABC transporter Swol_2095 PF02492 CobW/HypB/UreG, nucleotide-binding domain Swol_2099 PF01380 SIS domain Swol_2100 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Swol_2100 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Swol_2100 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Swol_2100 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Swol_2103 PF02457 DisA bacterial checkpoint controller nucleotide-binding Swol_2105 PF12838 4Fe-4S dicluster domain Swol_2106 PF13188 PAS domain Swol_2106 PF00072 Response regulator receiver domain Swol_2106 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_2106 PF00512 His Kinase A (phospho-acceptor) domain Swol_2106 PF08448 PAS fold Swol_2107 PF00588 SpoU rRNA Methylase family Swol_2108 PF08486 Stage II sporulation protein Swol_2110 PF00005 ABC transporter Swol_2110 PF12399 Branched-chain amino acid ATP-binding cassette transporter Swol_2111 PF02653 Branched-chain amino acid transport system / permease component Swol_2111 PF11862 Domain of unknown function (DUF3382) Swol_2112 PF02653 Branched-chain amino acid transport system / permease component Swol_2113 PF13458 Periplasmic binding protein Swol_2115 PF00075 RNase H Swol_2121 PF01012 Electron transfer flavoprotein domain Swol_2121 PF00766 Electron transfer flavoprotein FAD-binding domain Swol_2122 PF01012 Electron transfer flavoprotein domain Swol_2124 PF01494 FAD binding domain Swol_2126 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Swol_2126 PF02770 Acyl-CoA dehydrogenase, middle domain Swol_2126 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Swol_2127 PF01047 MarR family Swol_2128 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Swol_2128 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Swol_2129 PF00378 Enoyl-CoA hydratase/isomerase Swol_2130 PF00072 Response regulator receiver domain Swol_2131 PF00072 Response regulator receiver domain Swol_2132 PF00360 Phytochrome region Swol_2132 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_2132 PF00512 His Kinase A (phospho-acceptor) domain Swol_2132 PF01590 GAF domain Swol_2132 PF08446 PAS fold Swol_2134 PF01434 Peptidase family M41 Swol_2134 PF17862 AAA+ lid domain Swol_2134 PF00004 ATPase family associated with various cellular activities (AAA) Swol_2137 PF00483 Nucleotidyl transferase Swol_2139 PF00682 HMGL-like Swol_2139 PF08502 LeuA allosteric (dimerisation) domain Swol_2140 PF00180 Isocitrate/isopropylmalate dehydrogenase Swol_2141 PF00694 Aconitase C-terminal domain Swol_2142 PF00330 Aconitase family (aconitate hydratase) Swol_2143 PF08502 LeuA allosteric (dimerisation) domain Swol_2143 PF00682 HMGL-like Swol_2144 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Swol_2144 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Swol_2145 PF10369 Small subunit of acetolactate synthase Swol_2146 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Swol_2146 PF00205 Thiamine pyrophosphate enzyme, central domain Swol_2146 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Swol_2148 PF01063 Amino-transferase class IV Swol_2150 PF00672 HAMP domain Swol_2150 PF01966 HD domain Swol_2151 PF02743 Cache domain Swol_2151 PF00672 HAMP domain Swol_2151 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Swol_2152 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Swol_2152 PF02743 Cache domain Swol_2152 PF00672 HAMP domain Swol_2154 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Swol_2154 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Swol_2154 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Swol_2154 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Swol_2157 PF00535 Glycosyl transferase family 2 Swol_2158 PF00535 Glycosyl transferase family 2 Swol_2162 PF02743 Cache domain Swol_2162 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Swol_2162 PF00672 HAMP domain Swol_2164 PF00881 Nitroreductase family Swol_2166 PF03600 Citrate transporter Swol_2168 PF01814 Hemerythrin HHE cation binding domain Swol_2170 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Swol_2170 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Swol_2171 PF00850 Histone deacetylase domain Swol_2175 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Swol_2175 PF00586 AIR synthase related protein, N-terminal domain Swol_2175 PF02769 AIR synthase related protein, C-terminal domain Swol_2176 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_2176 PF00512 His Kinase A (phospho-acceptor) domain Swol_2177 PF00486 Transcriptional regulatory protein, C terminal Swol_2177 PF00072 Response regulator receiver domain Swol_2181 PF10417 C-terminal domain of 1-Cys peroxiredoxin Swol_2181 PF00578 AhpC/TSA family Swol_2182 PF10417 C-terminal domain of 1-Cys peroxiredoxin Swol_2182 PF00578 AhpC/TSA family Swol_2184 PF13180 PDZ domain Swol_2184 PF17820 PDZ domain Swol_2190 PF03063 Prismane/CO dehydrogenase family Swol_2199 PF04860 Phage portal protein Swol_2202 PF05717 IS66 Orf2 like protein Swol_2203 PF13005 zinc-finger binding domain of transposase IS66 Swol_2203 PF03050 Transposase IS66 family Swol_2203 PF13817 IS66 C-terminal element Swol_2203 PF13007 Transposase C of IS166 homeodomain Swol_2205 PF01695 IstB-like ATP binding protein Swol_2210 PF05717 IS66 Orf2 like protein Swol_2211 PF13007 Transposase C of IS166 homeodomain Swol_2211 PF03050 Transposase IS66 family Swol_2211 PF13005 zinc-finger binding domain of transposase IS66 Swol_2211 PF13817 IS66 C-terminal element Swol_2216 PF08299 Bacterial dnaA protein helix-turn-helix Swol_2216 PF00308 Bacterial dnaA protein Swol_2217 PF00665 Integrase core domain Swol_2219 PF01695 IstB-like ATP binding protein Swol_2220 PF00665 Integrase core domain Swol_2225 PF05958 tRNA (Uracil-5-)-methyltransferase Swol_2225 PF01938 TRAM domain Swol_2230 PF03412 Peptidase C39 family Swol_2230 PF00005 ABC transporter Swol_2230 PF00664 ABC transporter transmembrane region Swol_2231 PF00664 ABC transporter transmembrane region Swol_2231 PF00005 ABC transporter Swol_2231 PF03412 Peptidase C39 family Swol_2234 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Swol_2235 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Swol_2235 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Swol_2241 PF01906 Putative heavy-metal-binding Swol_2243 PF13732 Domain of unknown function (DUF4162) Swol_2243 PF00005 ABC transporter Swol_2244 PF00392 Bacterial regulatory proteins, gntR family Swol_2252 PF00589 Phage integrase family Swol_2252 PF14659 Phage integrase, N-terminal SAM-like domain Swol_2254 PF17862 AAA+ lid domain Swol_2254 PF00004 ATPase family associated with various cellular activities (AAA) Swol_2254 PF01434 Peptidase family M41 Swol_2256 PF18766 SWI2/SNF2 ATPase Swol_2256 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) Swol_2256 PF11867 Domain of unknown function (DUF3387) Swol_2262 PF12826 Helix-hairpin-helix motif Swol_2262 PF04002 RadC-like JAB domain Swol_2263 PF09588 YqaJ-like viral recombinase domain Swol_2267 PF00589 Phage integrase family Swol_2267 PF02899 Phage integrase, N-terminal SAM-like domain Swol_2271 PF04794 YdjC-like protein Swol_2280 PF13393 Histidyl-tRNA synthetase Swol_2281 PF03050 Transposase IS66 family Swol_2281 PF13817 IS66 C-terminal element Swol_2281 PF13007 Transposase C of IS166 homeodomain Swol_2281 PF13005 zinc-finger binding domain of transposase IS66 Swol_2284 PF13393 Histidyl-tRNA synthetase Swol_2284 PF03129 Anticodon binding domain Swol_2287 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Swol_2287 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Swol_2288 PF00202 Aminotransferase class-III Swol_2289 PF00696 Amino acid kinase family Swol_2290 PF01960 ArgJ family Swol_2291 PF01118 Semialdehyde dehydrogenase, NAD binding domain Swol_2291 PF02774 Semialdehyde dehydrogenase, dimerisation domain Swol_2292 PF01980 tRNA-methyltransferase O Swol_2294 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Swol_2294 PF01871 AMMECR1 Swol_2295 PF01520 N-acetylmuramoyl-L-alanine amidase Swol_2297 PF00380 Ribosomal protein S9/S16 Swol_2298 PF00572 Ribosomal protein L13 Swol_2299 PF01416 tRNA pseudouridine synthase Swol_2300 PF02361 Cobalt transport protein Swol_2301 PF00005 ABC transporter Swol_2302 PF00005 ABC transporter Swol_2303 PF01196 Ribosomal protein L17 Swol_2304 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Swol_2304 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Swol_2304 PF01000 RNA polymerase Rpb3/RpoA insert domain Swol_2305 PF00163 Ribosomal protein S4/S9 N-terminal domain Swol_2305 PF01479 S4 domain Swol_2306 PF00411 Ribosomal protein S11 Swol_2307 PF00416 Ribosomal protein S13/S18 Swol_2308 PF00444 Ribosomal protein L36 Swol_2309 PF01176 Translation initiation factor 1A / IF-1 Swol_2311 PF00557 Metallopeptidase family M24 Swol_2312 PF05191 Adenylate kinase, active site lid Swol_2313 PF00344 SecY translocase Swol_2314 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Swol_2315 PF00327 Ribosomal protein L30p/L7e Swol_2316 PF03719 Ribosomal protein S5, C-terminal domain Swol_2316 PF00333 Ribosomal protein S5, N-terminal domain Swol_2317 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Swol_2318 PF00347 Ribosomal protein L6 Swol_2319 PF00410 Ribosomal protein S8 Swol_2321 PF00673 ribosomal L5P family C-terminus Swol_2321 PF00281 Ribosomal protein L5 Swol_2322 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Swol_2322 PF00467 KOW motif Swol_2323 PF00238 Ribosomal protein L14p/L23e Swol_2324 PF00366 Ribosomal protein S17 Swol_2325 PF00831 Ribosomal L29 protein Swol_2326 PF00252 Ribosomal protein L16p/L10e Swol_2327 PF07650 KH domain Swol_2327 PF00189 Ribosomal protein S3, C-terminal domain Swol_2328 PF00237 Ribosomal protein L22p/L17e Swol_2329 PF00203 Ribosomal protein S19 Swol_2330 PF03947 Ribosomal Proteins L2, C-terminal domain Swol_2330 PF00181 Ribosomal Proteins L2, RNA binding domain Swol_2331 PF00276 Ribosomal protein L23 Swol_2332 PF00573 Ribosomal protein L4/L1 family Swol_2333 PF00297 Ribosomal protein L3 Swol_2334 PF00338 Ribosomal protein S10p/S20e Swol_2335 PF00009 Elongation factor Tu GTP binding domain Swol_2335 PF03144 Elongation factor Tu domain 2 Swol_2335 PF03143 Elongation factor Tu C-terminal domain Swol_2336 PF14492 Elongation Factor G, domain II Swol_2336 PF00009 Elongation factor Tu GTP binding domain Swol_2336 PF00679 Elongation factor G C-terminus Swol_2336 PF03764 Elongation factor G, domain IV Swol_2336 PF03144 Elongation factor Tu domain 2 Swol_2337 PF00177 Ribosomal protein S7p/S5e Swol_2338 PF00164 Ribosomal protein S12/S23 Swol_2339 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Swol_2340 PF00623 RNA polymerase Rpb1, domain 2 Swol_2340 PF04983 RNA polymerase Rpb1, domain 3 Swol_2340 PF04997 RNA polymerase Rpb1, domain 1 Swol_2340 PF05000 RNA polymerase Rpb1, domain 4 Swol_2340 PF04998 RNA polymerase Rpb1, domain 5 Swol_2341 PF04560 RNA polymerase Rpb2, domain 7 Swol_2341 PF00562 RNA polymerase Rpb2, domain 6 Swol_2341 PF04563 RNA polymerase beta subunit Swol_2341 PF04561 RNA polymerase Rpb2, domain 2 Swol_2341 PF04565 RNA polymerase Rpb2, domain 3 Swol_2341 PF10385 RNA polymerase beta subunit external 1 domain Swol_2343 PF00542 Ribosomal protein L7/L12 C-terminal domain Swol_2343 PF16320 Ribosomal protein L7/L12 dimerisation domain Swol_2344 PF00466 Ribosomal protein L10 Swol_2345 PF00687 Ribosomal protein L1p/L10e family Swol_2346 PF03946 Ribosomal protein L11, N-terminal domain Swol_2346 PF00298 Ribosomal protein L11, RNA binding domain Swol_2347 PF02357 Transcription termination factor nusG Swol_2347 PF00467 KOW motif Swol_2349 PF00471 Ribosomal protein L33 Swol_2350 PF03143 Elongation factor Tu C-terminal domain Swol_2350 PF03144 Elongation factor Tu domain 2 Swol_2350 PF00009 Elongation factor Tu GTP binding domain Swol_2351 PF04542 Sigma-70 region 2 Swol_2351 PF08281 Sigma-70, region 4 Swol_2352 PF00588 SpoU rRNA Methylase family Swol_2352 PF08032 RNA 2'-O ribose methyltransferase substrate binding Swol_2353 PF02511 Thymidylate synthase complementing protein Swol_2354 PF00636 Ribonuclease III domain Swol_2356 PF00132 Bacterial transferase hexapeptide (six repeats) Swol_2357 PF00749 tRNA synthetases class I (E and Q), catalytic domain Swol_2358 PF06207 Protein of unknown function (DUF1002) Swol_2360 PF02542 YgbB family Swol_2361 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Swol_2363 PF00258 Flavodoxin Swol_2363 PF00753 Metallo-beta-lactamase superfamily Swol_2365 PF02457 DisA bacterial checkpoint controller nucleotide-binding Swol_2365 PF10635 DisA bacterial checkpoint controller linker region Swol_2365 PF00633 Helix-hairpin-helix motif Swol_2366 PF18073 Rubredoxin metal binding domain Swol_2367 PF17871 AAA lid domain Swol_2367 PF02861 Clp amino terminal domain, pathogenicity island component Swol_2367 PF10431 C-terminal, D2-small domain, of ClpB protein Swol_2367 PF07724 AAA domain (Cdc48 subfamily) Swol_2367 PF00004 ATPase family associated with various cellular activities (AAA) Swol_2368 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain Swol_2369 PF02151 UvrB/uvrC motif Swol_2370 PF17727 CtsR C-terminal dimerization domain Swol_2370 PF05848 CtsR N-terminal HTH domain Swol_2371 PF02491 SHS2 domain inserted in FTSA Swol_2372 PF03808 Glycosyl transferase WecB/TagA/CpsF family Swol_2373 PF00460 Flagella basal body rod protein Swol_2373 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Swol_2375 PF12116 Stage III sporulation protein D Swol_2376 PF08486 Stage II sporulation protein Swol_2377 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Swol_2381 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Swol_2381 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Swol_2382 PF02874 ATP synthase alpha/beta family, beta-barrel domain Swol_2382 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Swol_2383 PF00231 ATP synthase Swol_2384 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Swol_2384 PF02874 ATP synthase alpha/beta family, beta-barrel domain Swol_2384 PF00306 ATP synthase alpha/beta chain, C terminal domain Swol_2385 PF00213 ATP synthase delta (OSCP) subunit Swol_2386 PF00430 ATP synthase B/B' CF(0) Swol_2387 PF00137 ATP synthase subunit C Swol_2388 PF00119 ATP synthase A chain Swol_2392 PF00464 Serine hydroxymethyltransferase Swol_2393 PF01451 Low molecular weight phosphotyrosine protein phosphatase Swol_2394 PF02659 Putative manganese efflux pump Swol_2395 PF01300 Telomere recombination Swol_2395 PF03481 Putative GTP-binding controlling metal-binding Swol_2396 PF05175 Methyltransferase small domain Swol_2396 PF17827 PrmC N-terminal domain Swol_2397 PF00472 RF-1 domain Swol_2397 PF03462 PCRF domain Swol_2398 PF07136 Protein of unknown function (DUF1385) Swol_2399 PF01197 Ribosomal protein L31 Swol_2400 PF00072 Response regulator receiver domain Swol_2400 PF04397 LytTr DNA-binding domain Swol_2404 PF01336 OB-fold nucleic acid binding domain Swol_2404 PF01966 HD domain Swol_2406 PF01551 Peptidase family M23 Swol_2407 PF01966 HD domain Swol_2408 PF07498 Rho termination factor, N-terminal domain Swol_2408 PF07497 Rho termination factor, RNA-binding domain Swol_2408 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Swol_2409 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Swol_2410 PF00923 Transaldolase/Fructose-6-phosphate aldolase Swol_2411 PF01116 Fructose-bisphosphate aldolase class-II Swol_2412 PF00072 Response regulator receiver domain Swol_2415 PF01343 Peptidase family S49 Swol_2416 PF01168 Alanine racemase, N-terminal domain Swol_2416 PF00842 Alanine racemase, C-terminal domain Swol_2417 PF02388 FemAB family Swol_2418 PF00117 Glutamine amidotransferase class-I Swol_2418 PF06418 CTP synthase N-terminus Swol_2421 PF00750 tRNA synthetases class I (R) Swol_2421 PF05746 DALR anticodon binding domain Swol_2421 PF03485 Arginyl tRNA synthetase N terminal domain Swol_2424 PF00072 Response regulator receiver domain Swol_2425 PF13686 DsrE/DsrF/DrsH-like family Swol_2428 PF01541 GIY-YIG catalytic domain Swol_2429 PF00266 Aminotransferase class-V Swol_2430 PF00005 ABC transporter Swol_2430 PF09383 NIL domain Swol_2431 PF00528 Binding-protein-dependent transport system inner membrane component Swol_2432 PF03180 NLPA lipoprotein Swol_2433 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Swol_2435 PF00990 Diguanylate cyclase, GGDEF domain Swol_2436 PF02906 Iron only hydrogenase large subunit, C-terminal domain Swol_2436 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Swol_2436 PF00037 4Fe-4S binding domain Swol_2436 PF02256 Iron hydrogenase small subunit Swol_2439 PF00535 Glycosyl transferase family 2 Swol_2441 PF00486 Transcriptional regulatory protein, C terminal Swol_2441 PF00072 Response regulator receiver domain Swol_2443 PF00753 Metallo-beta-lactamase superfamily Swol_2445 PF02585 GlcNAc-PI de-N-acetylase Swol_2447 PF00005 ABC transporter Swol_2448 PF00005 ABC transporter Swol_2450 PF00440 Bacterial regulatory proteins, tetR family Swol_2453 PF13396 Phospholipase_D-nuclease N-terminal Swol_2453 PF13091 PLD-like domain Swol_2454 PF00696 Amino acid kinase family Swol_2456 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Swol_2457 PF12704 MacB-like periplasmic core domain Swol_2457 PF02687 FtsX-like permease family Swol_2457 PF00005 ABC transporter Swol_2458 PF12704 MacB-like periplasmic core domain Swol_2458 PF02687 FtsX-like permease family Swol_2459 PF00749 tRNA synthetases class I (E and Q), catalytic domain Swol_2459 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain Swol_2460 PF00578 AhpC/TSA family Swol_2462 PF12801 4Fe-4S binding domain Swol_2462 PF04205 FMN-binding domain Swol_2463 PF01348 Type II intron maturase Swol_2463 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Swol_2464 PF01906 Putative heavy-metal-binding Swol_2467 PF02590 Predicted SPOUT methyltransferase Swol_2469 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Swol_2471 PF07992 Pyridine nucleotide-disulphide oxidoreductase Swol_2472 PF08525 Opacity-associated protein A N-terminal motif Swol_2472 PF01551 Peptidase family M23 Swol_2472 PF01476 LysM domain Swol_2477 PF00528 Binding-protein-dependent transport system inner membrane component Swol_2478 PF00005 ABC transporter Swol_2478 PF08402 TOBE domain Swol_2480 PF00528 Binding-protein-dependent transport system inner membrane component Swol_2481 PF00005 ABC transporter Swol_2481 PF08402 TOBE domain Swol_2483 PF00072 Response regulator receiver domain Swol_2483 PF01966 HD domain Swol_2497 PF00395 S-layer homology domain Swol_2498 PF07676 WD40-like Beta Propeller Repeat Swol_2498 PF00326 Prolyl oligopeptidase family Swol_2498 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region Swol_2515 PF09827 CRISPR associated protein Cas2 Swol_2516 PF01867 CRISPR associated protein Cas1 Swol_2518 PF18395 Cas3 C-terminal domain Swol_2518 PF00270 DEAD/DEAH box helicase Swol_2518 PF18019 HD domain Swol_2533 PF00709 Adenylosuccinate synthetase Swol_2534 PF00004 ATPase family associated with various cellular activities (AAA) Swol_2534 PF05362 Lon protease (S16) C-terminal proteolytic domain Swol_2535 PF03948 Ribosomal protein L9, C-terminal domain Swol_2535 PF01281 Ribosomal protein L9, N-terminal domain Swol_2538 PF01084 Ribosomal protein S18 Swol_2539 PF00436 Single-strand binding protein family Swol_2540 PF01250 Ribosomal protein S6 Swol_2542 PF02769 AIR synthase related protein, C-terminal domain Swol_2542 PF00586 AIR synthase related protein, N-terminal domain Swol_2543 PF02127 Aminopeptidase I zinc metalloprotease (M18) Swol_2545 PF09335 SNARE associated Golgi protein Swol_2546 PF13426 PAS domain Swol_2546 PF13188 PAS domain Swol_2546 PF00989 PAS fold Swol_2546 PF00512 His Kinase A (phospho-acceptor) domain Swol_2546 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_2547 PF00158 Sigma-54 interaction domain Swol_2547 PF00072 Response regulator receiver domain Swol_2547 PF02954 Bacterial regulatory protein, Fis family Swol_2551 PF00571 CBS domain Swol_2552 PF00005 ABC transporter Swol_2553 PF00005 ABC transporter Swol_2553 PF12399 Branched-chain amino acid ATP-binding cassette transporter Swol_2554 PF11862 Domain of unknown function (DUF3382) Swol_2554 PF02653 Branched-chain amino acid transport system / permease component Swol_2555 PF02653 Branched-chain amino acid transport system / permease component Swol_2556 PF13458 Periplasmic binding protein Swol_2557 PF01869 BadF/BadG/BcrA/BcrD ATPase family Swol_2560 PF09107 Elongation factor SelB, winged helix Swol_2560 PF09105 Elongation factor SelB, winged helix Swol_2560 PF03144 Elongation factor Tu domain 2 Swol_2560 PF00009 Elongation factor Tu GTP binding domain Swol_2560 PF09106 Elongation factor SelB, winged helix Swol_2561 PF03841 L-seryl-tRNA selenium transferase Swol_2561 PF12390 Selenocysteine synthase N terminal Swol_2563 PF06866 Protein of unknown function (DUF1256) Swol_2565 PF01476 LysM domain Swol_2565 PF08525 Opacity-associated protein A N-terminal motif Swol_2565 PF01551 Peptidase family M23 Swol_2566 PF00378 Enoyl-CoA hydratase/isomerase Swol_2567 PF02195 ParB-like nuclease domain Swol_2567 PF17762 HTH domain found in ParB protein Swol_2568 PF13614 AAA domain Swol_2569 PF02195 ParB-like nuclease domain Swol_2569 PF17762 HTH domain found in ParB protein Swol_2570 PF02527 rRNA small subunit methyltransferase G Swol_2571 PF01134 Glucose inhibited division protein A Swol_2571 PF13932 GidA associated domain Swol_2572 PF12631 MnmE helical domain Swol_2572 PF10396 GTP-binding protein TrmE N-terminus Swol_2572 PF01926 50S ribosome-binding GTPase Swol_2573 PF14804 Jag N-terminus Swol_2573 PF01424 R3H domain Swol_2575 PF01809 Putative membrane protein insertion efficiency factor Swol_2576 PF00825 Ribonuclease P Swol_2577 PF00468 Ribosomal protein L34