Swol_0001 PF00308 Bacterial dnaA protein Swol_0001 PF08299 Bacterial dnaA protein helix-turn-helix Swol_0001 PF11638 DnaA N-terminal domain Swol_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain Swol_0002 PF02767 DNA polymerase III beta subunit, central domain Swol_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain Swol_0003 PF02463 RecF/RecN/SMC N terminal domain Swol_0004 PF04025 Swol_0004 Swol_0005 PF00204 DNA gyrase B Swol_0005 PF00986 DNA gyrase B subunit, carboxyl terminus Swol_0005 PF01751 Toprim domain Swol_0005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_0006 PF00521 DNA gyrase/topoisomerase IV, subunit A Swol_0006 PF03989 DNA gyrase C-terminal domain, beta-propeller Swol_0007 PF01680 SOR/SNZ family Swol_0008 PF00266 Aminotransferase class-V Swol_0009 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Swol_0009 PF01842 ACT domain Swol_0009 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Swol_0010 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Swol_0010 PF02403 Seryl-tRNA synthetase N-terminal domain Swol_0011 PF00990 GGDEF domain Swol_0011 PF08448 PAS fold Swol_0011 PF13487 HD domain Swol_0012 PF08495 Swol_0012 Swol_0012 PF10442 Swol_0012 Swol_0013 PF14437 Swol_0013 Swol_0014 PF02646 Swol_0014 Swol_0015 PF02578 Multi-copper polyphenol oxidoreductase laccase Swol_0018 PF12705 PD-(D/E)XK nuclease superfamily Swol_0021 PF01555 DNA methylase Swol_0022 PF03358 NADPH-dependent FMN reductase Swol_0023 PF01695 IstB-like ATP binding protein Swol_0024 PF00665 Integrase core domain Swol_0025 PF03061 Thioesterase superfamily Swol_0026 PF00440 Bacterial regulatory proteins, tetR family Swol_0027 PF13173 AAA domain Swol_0027 PF13635 Swol_0027 Swol_0028 PF01170 Putative RNA methylase family UPF0020 Swol_0028 PF02926 THUMP domain Swol_0029 PF02625 XdhC and CoxI family Swol_0029 PF13478 XdhC Rossmann domain Swol_0030 PF12169 DNA polymerase III subunits gamma and tau domain III Swol_0030 PF13177 DNA polymerase III, delta subunit Swol_0031 PF02575 YbaB/EbfC DNA-binding family Swol_0032 PF00633 Helix-hairpin-helix motif Swol_0032 PF02132 RecR protein Swol_0032 PF13662 Toprim domain Swol_0033 PF10704 Swol_0033 Swol_0034 PF07441 Swol_0034 Swol_0036 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Swol_0036 PF17147 Swol_0036 Swol_0037 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Swol_0038 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Swol_0039 PF01276 Orn/Lys/Arg decarboxylase, major domain Swol_0039 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Swol_0040 PF02223 Thymidylate kinase Swol_0041 PF03885 Protein of unknown function (DUF327) Swol_0042 PF13177 DNA polymerase III, delta subunit Swol_0043 PF04468 Swol_0043 Swol_0044 PF06156 Swol_0044 Swol_0045 PF05175 Methyltransferase small domain Swol_0046 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Swol_0047 PF04014 Antidote-toxin recognition MazE Swol_0049 PF00133 tRNA synthetases class I (I, L, M and V) Swol_0049 PF01588 Putative tRNA binding domain Swol_0049 PF08264 Anticodon-binding domain of tRNA Swol_0049 PF09334 tRNA synthetases class I (M) Swol_0050 PF01026 TatD related DNase Swol_0051 PF03990 Swol_0051 Swol_0051 PF06725 3D domain Swol_0051 PF07501 G5 domain Swol_0052 PF09580 Swol_0052 Swol_0053 PF00398 Ribosomal RNA adenine dimethylase Swol_0054 PF04308 Swol_0054 Swol_0055 PF06257 Protein of unknown function (DUF1021) Swol_0058 PF13692 Glycosyl transferases group 1 Swol_0059 PF03452 Anp1 Swol_0062 PF01734 Patatin-like phospholipase Swol_0063 PF09551 Swol_0063 Swol_0064 PF00288 GHMP kinases N terminal domain Swol_0064 PF08544 GHMP kinases C terminal Swol_0065 PF00392 Bacterial regulatory proteins, gntR family Swol_0065 PF07729 FCD domain Swol_0066 PF12804 MobA-like NTP transferase domain Swol_0067 PF00132 Bacterial transferase hexapeptide (six repeats) Swol_0067 PF12804 MobA-like NTP transferase domain Swol_0068 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Swol_0068 PF14572 Phosphoribosyl synthetase-associated domain Swol_0069 PF01386 Ribosomal L25p family Swol_0069 PF14693 Ribosomal protein TL5, C-terminal domain Swol_0070 PF01195 Peptidyl-tRNA hydrolase Swol_0073 PF00270 DEAD/DEAH box helicase Swol_0073 PF00271 Helicase conserved C-terminal domain Swol_0073 PF02559 CarD-like/TRCF domain Swol_0073 PF03461 TRCF domain Swol_0074 PF03845 Swol_0074 Swol_0075 PF05504 Spore germination B3/ GerAC like, C-terminal Swol_0077 PF05504 Spore germination B3/ GerAC like, C-terminal Swol_0078 PF03323 Swol_0078 Swol_0079 PF03845 Swol_0079 Swol_0080 PF04014 Antidote-toxin recognition MazE Swol_0080 PF15714 Swol_0080 Swol_0081 PF01943 Swol_0081 Swol_0081 PF14667 Polysaccharide biosynthesis C-terminal domain Swol_0082 PF03819 MazG nucleotide pyrophosphohydrolase domain Swol_0083 PF00216 Bacterial DNA-binding protein Swol_0084 PF01479 S4 domain Swol_0085 PF07873 YabP family Swol_0086 PF09578 Swol_0086 Swol_0088 PF04977 Septum formation initiator Swol_0089 PF00575 S1 RNA binding domain Swol_0090 PF02541 Ppx/GppA phosphatase family Swol_0091 PF01226 Formate/nitrite transporter Swol_0093 PF07228 Stage II sporulation protein E (SpoIIE) Swol_0094 PF01171 PP-loop family Swol_0094 PF11734 TilS substrate C-terminal domain Swol_0095 PF00004 ATPase family associated with various cellular activities (AAA) Swol_0095 PF01434 Peptidase family M41 Swol_0095 PF06480 FtsH Extracellular Swol_0096 PF01966 HD domain Swol_0097 PF00809 Pterin binding enzyme Swol_0098 PF02152 Dihydroneopterin aldolase Swol_0099 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Swol_0100 PF10727 Rossmann-like domain Swol_0100 PF10728 Domain of unknown function (DUF2520) Swol_0101 PF02548 Ketopantoate hydroxymethyltransferase Swol_0102 PF02569 Pantoate-beta-alanine ligase Swol_0103 PF02261 Aspartate decarboxylase Swol_0104 PF02445 Quinolinate synthetase A protein Swol_0105 PF00890 FAD binding domain Swol_0105 PF02910 Fumarate reductase flavoprotein C-term Swol_0107 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Swol_0107 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Swol_0108 PF02632 BioY family Swol_0109 PF03309 Type III pantothenate kinase Swol_0110 PF01207 Dihydrouridine synthase (Dus) Swol_0115 PF01272 Transcription elongation factor, GreA/GreB, C-term Swol_0115 PF03449 Transcription elongation factor, N-terminal Swol_0116 PF00152 tRNA synthetases class II (D, K and N) Swol_0116 PF01336 OB-fold nucleic acid binding domain Swol_0117 PF03062 Swol_0117 Swol_0122 PF03023 Swol_0122 Swol_0123 PF04230 Swol_0123 Swol_0124 PF00953 Glycosyl transferase family 4 Swol_0125 PF03816 Cell envelope-related transcriptional attenuator domain Swol_0126 PF01520 N-acetylmuramoyl-L-alanine amidase Swol_0126 PF07833 Copper amine oxidase N-terminal domain Swol_0126 PF08239 Bacterial SH3 domain Swol_0127 PF04932 Swol_0127 Swol_0128 PF02719 Polysaccharide biosynthesis protein Swol_0128 PF13727 CoA-binding domain Swol_0129 PF06695 Swol_0129 Swol_0130 PF00082 Subtilase family Swol_0130 PF00395 S-layer homology domain Swol_0131 PF13490 Putative zinc-finger Swol_0132 PF04542 Sigma-70 region 2 Swol_0132 PF08281 Sigma-70, region 4 Swol_0133 PF07833 Copper amine oxidase N-terminal domain Swol_0134 PF02321 Outer membrane efflux protein Swol_0136 PF01797 Transposase IS200 like Swol_0137 PF07833 Copper amine oxidase N-terminal domain Swol_0138 PF01609 Transposase DDE domain Swol_0138 PF05598 Swol_0138 Swol_0139 PF07833 Copper amine oxidase N-terminal domain Swol_0140 PF07833 Copper amine oxidase N-terminal domain Swol_0141 PF00395 S-layer homology domain Swol_0141 PF13290 Swol_0141 Swol_0145 PF01909 Nucleotidyltransferase domain Swol_0146 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Swol_0146 PF08388 Swol_0146 Swol_0147 PF04754 Swol_0147 Swol_0148 PF01797 Transposase IS200 like Swol_0149 PF03354 Swol_0149 Swol_0150 PF04221 RelB antitoxin Swol_0151 PF05016 Plasmid stabilisation system protein Swol_0152 PF13751 Swol_0152 Swol_0155 PF00872 Swol_0155 Swol_0158 PF01966 HD domain Swol_0159 PF13274 Swol_0159 Swol_0160 PF02661 Fic/DOC family Swol_0161 PF00415 Regulator of chromosome condensation (RCC1) repeat Swol_0161 PF12733 Swol_0161 Swol_0161 PF13540 Regulator of chromosome condensation (RCC1) repeat Swol_0162 PF00082 Subtilase family Swol_0162 PF02368 Bacterial Ig-like domain (group 2) Swol_0164 PF01797 Transposase IS200 like Swol_0165 PF13205 Bacterial Ig-like domain Swol_0165 PF13290 Swol_0165 Swol_0165 PF13360 PQQ-like domain Swol_0165 PF13570 PQQ-like domain Swol_0165 PF13753 Putative flagellar system-associated repeat Swol_0166 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Swol_0166 PF08388 Swol_0166 Swol_0168 PF03572 Peptidase family S41 Swol_0168 PF13180 PDZ domain Swol_0169 PF01841 Transglutaminase-like superfamily Swol_0169 PF12733 Swol_0169 Swol_0170 PF13205 Bacterial Ig-like domain Swol_0172 PF05345 Putative Ig domain Swol_0173 PF03704 Bacterial transcriptional activator domain Swol_0174 PF03160 Calx-beta domain Swol_0175 PF16576 Swol_0175 Swol_0176 PF00873 AcrB/AcrD/AcrF family Swol_0177 PF00440 Bacterial regulatory proteins, tetR family Swol_0178 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Swol_0178 PF08388 Swol_0178 Swol_0179 PF00529 HlyD family secretion protein Swol_0179 PF16576 Swol_0179 Swol_0180 PF00005 ABC transporter Swol_0181 PF12698 ABC-2 family transporter protein Swol_0182 PF12698 ABC-2 family transporter protein Swol_0184 PF02350 UDP-N-acetylglucosamine 2-epimerase Swol_0185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_0185 PF05384 Swol_0185 Swol_0185 PF07730 Histidine kinase Swol_0186 PF00072 Response regulator receiver domain Swol_0186 PF00196 Bacterial regulatory proteins, luxR family Swol_0188 PF00156 Phosphoribosyl transferase domain Swol_0190 PF04316 Anti-sigma-28 factor, FlgM Swol_0191 PF05130 FlgN protein Swol_0192 PF00460 Flagella basal body rod protein Swol_0192 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Swol_0193 PF00669 Bacterial flagellin N-terminal helical region Swol_0193 PF00700 Bacterial flagellin C-terminal helical region Swol_0195 PF02623 FliW protein Swol_0196 PF02599 Global regulator protein family Swol_0197 PF02465 Swol_0197 Swol_0197 PF07195 Swol_0197 Swol_0197 PF07196 Flagellin hook IN motif Swol_0198 PF00669 Bacterial flagellin N-terminal helical region Swol_0198 PF00700 Bacterial flagellin C-terminal helical region Swol_0199 PF01973 Swol_0199 Swol_0200 PF13302 Acetyltransferase (GNAT) domain Swol_0201 PF02348 Cytidylyltransferase Swol_0202 PF00248 Aldo/keto reductase family Swol_0203 PF00202 Aminotransferase class-III Swol_0204 PF13304 AAA domain Swol_0205 PF14103 Swol_0205 Swol_0206 PF01909 Nucleotidyltransferase domain Swol_0208 PF00551 Formyl transferase Swol_0209 PF13847 Methyltransferase domain Swol_0210 PF03102 NeuB family Swol_0210 PF08666 SAF domain Swol_0211 PF02585 GlcNAc-PI de-N-acetylase Swol_0212 PF04101 Glycosyltransferase family 28 C-terminal domain Swol_0216 PF01934 Protein of unknown function DUF86 Swol_0219 PF07927 YcfA-like protein Swol_0220 PF08780 Nucleotidyltransferase substrate binding protein like Swol_0221 PF01909 Nucleotidyltransferase domain Swol_0222 PF11144 Swol_0222 Swol_0223 PF13614 AAA domain Swol_0225 PF04014 Antidote-toxin recognition MazE Swol_0226 PF01850 PIN domain Swol_0227 PF02719 Polysaccharide biosynthesis protein Swol_0228 PF01370 NAD dependent epimerase/dehydratase family Swol_0229 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Swol_0230 PF14070 Swol_0230 Swol_0232 PF02561 Flagellar protein FliS Swol_0233 PF03646 FlaG protein Swol_0236 PF13451 Swol_0236 Swol_0237 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Swol_0237 PF16321 Swol_0237 Swol_0238 PF01043 SecA preprotein cross-linking domain Swol_0238 PF02810 SEC-C motif Swol_0238 PF07516 SecA Wing and Scaffold domain Swol_0238 PF07517 SecA DEAD-like domain Swol_0239 PF01618 Swol_0239 Swol_0240 PF00691 OmpA family Swol_0240 PF13677 Swol_0240 Swol_0241 PF00472 RF-1 domain Swol_0241 PF03462 PCRF domain Swol_0243 PF00456 Transketolase, thiamine diphosphate binding domain Swol_0244 PF02779 Transketolase, pyrimidine binding domain Swol_0244 PF02780 Transketolase, C-terminal domain Swol_0245 PF00005 ABC transporter Swol_0246 PF02687 Swol_0246 Swol_0247 PF01551 Peptidase family M23 Swol_0248 PF03572 Peptidase family S41 Swol_0248 PF13180 PDZ domain Swol_0249 PF13180 PDZ domain Swol_0251 PF00271 Helicase conserved C-terminal domain Swol_0251 PF02151 UvrB/uvrC motif Swol_0251 PF04851 Type III restriction enzyme, res subunit Swol_0251 PF12344 Ultra-violet resistance protein B Swol_0254 PF01541 GIY-YIG catalytic domain Swol_0254 PF02151 UvrB/uvrC motif Swol_0254 PF08459 UvrC Helix-hairpin-helix N-terminal Swol_0254 PF14520 Helix-hairpin-helix domain Swol_0255 PF04020 Swol_0255 Swol_0257 PF12784 Swol_0257 Swol_0257 PF14261 Swol_0257 Swol_0258 PF08282 haloacid dehalogenase-like hydrolase Swol_0259 PF00480 ROK family Swol_0260 PF10432 Bacterial phospho-glucose isomerase C-terminal region Swol_0262 PF03668 Swol_0262 Swol_0263 PF01933 Uncharacterised protein family UPF0052 Swol_0264 PF02650 WhiA C-terminal HTH domain Swol_0264 PF10298 WhiA N-terminal LAGLIDADG-like domain Swol_0264 PF14527 WhiA LAGLIDADG-like domain Swol_0265 PF00309 Swol_0265 Swol_0265 PF04552 Sigma-54, DNA binding domain Swol_0265 PF04963 Sigma-54 factor, core binding domain Swol_0266 PF00766 Electron transfer flavoprotein FAD-binding domain Swol_0266 PF01012 Electron transfer flavoprotein domain Swol_0267 PF01012 Electron transfer flavoprotein domain Swol_0268 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Swol_0268 PF02770 Acyl-CoA dehydrogenase, middle domain Swol_0268 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Swol_0269 PF01047 MarR family Swol_0271 PF04198 Putative sugar-binding domain Swol_0272 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Swol_0272 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Swol_0273 PF00162 Phosphoglycerate kinase Swol_0274 PF00121 Triosephosphate isomerase Swol_0275 PF01676 Metalloenzyme superfamily Swol_0275 PF06415 BPG-independent PGAM N-terminus (iPGM_N) Swol_0276 PF00113 Enolase, C-terminal TIM barrel domain Swol_0276 PF03952 Enolase, N-terminal domain Swol_0277 PF03840 Preprotein translocase SecG subunit Swol_0278 PF12146 Putative lysophospholipase Swol_0279 PF01966 HD domain Swol_0280 PF00575 S1 RNA binding domain Swol_0280 PF00773 RNB domain Swol_0280 PF08206 Ribonuclease B OB domain Swol_0281 PF01668 SmpB protein Swol_0283 PF12802 MarR family Swol_0284 PF02517 CAAX protease self-immunity Swol_0286 PF15781 Swol_0286 Swol_0290 PF05598 Swol_0290 Swol_0290 PF13751 Swol_0290 Swol_0291 PF00144 Beta-lactamase Swol_0293 PF00395 S-layer homology domain Swol_0293 PF13385 Concanavalin A-like lectin/glucanases superfamily Swol_0294 PF00144 Beta-lactamase Swol_0294 PF00395 S-layer homology domain Swol_0296 PF12833 Helix-turn-helix domain Swol_0298 PF00395 S-layer homology domain Swol_0298 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) Swol_0302 PF00270 DEAD/DEAH box helicase Swol_0302 PF00271 Helicase conserved C-terminal domain Swol_0304 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Swol_0304 PF08388 Swol_0304 Swol_0305 PF00753 Metallo-beta-lactamase superfamily Swol_0305 PF07521 RNA-metabolising metallo-beta-lactamase Swol_0305 PF10996 Beta-Casp domain Swol_0306 PF00158 Sigma-54 interaction domain Swol_0306 PF00989 PAS fold Swol_0306 PF02954 Bacterial regulatory protein, Fis family Swol_0306 PF13426 PAS domain Swol_0307 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Swol_0307 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Swol_0308 PF00108 Thiolase, N-terminal domain Swol_0308 PF02803 Thiolase, C-terminal domain Swol_0309 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Swol_0309 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Swol_0310 PF05598 Swol_0310 Swol_0310 PF13751 Swol_0310 Swol_0311 PF00375 Sodium:dicarboxylate symporter family Swol_0313 PF01554 MatE Swol_0314 PF00005 ABC transporter Swol_0315 PF00528 Binding-protein-dependent transport system inner membrane component Swol_0316 PF00497 Bacterial extracellular solute-binding proteins, family 3 Swol_0317 PF00395 S-layer homology domain Swol_0317 PF07550 Swol_0317 Swol_0318 PF01926 50S ribosome-binding GTPase Swol_0320 PF14276 Swol_0320 Swol_0321 PF04239 Protein of unknown function (DUF421) Swol_0322 PF00027 Cyclic nucleotide-binding domain Swol_0323 PF00005 ABC transporter Swol_0324 PF02653 Swol_0324 Swol_0325 PF04392 ABC transporter substrate binding protein Swol_0327 PF03061 Thioesterase superfamily Swol_0329 PF06808 Swol_0329 Swol_0330 PF04290 Swol_0330 Swol_0331 PF03480 Bacterial extracellular solute-binding protein, family 7 Swol_0333 PF01661 Macro domain Swol_0334 PF00072 Response regulator receiver domain Swol_0336 PF00989 PAS fold Swol_0336 PF00990 GGDEF domain Swol_0337 PF01590 GAF domain Swol_0337 PF01966 HD domain Swol_0337 PF13487 HD domain Swol_0338 PF12706 Beta-lactamase superfamily domain Swol_0339 PF00005 ABC transporter Swol_0340 PF00528 Binding-protein-dependent transport system inner membrane component Swol_0341 PF13379 NMT1-like family Swol_0342 PF03109 Swol_0342 Swol_0343 PF00211 Adenylate and Guanylate cyclase catalytic domain Swol_0343 PF05226 Swol_0343 Swol_0344 PF03775 Septum formation inhibitor MinC, C-terminal domain Swol_0345 PF03776 Septum formation topological specificity factor MinE Swol_0346 PF13614 AAA domain Swol_0347 PF03618 Swol_0347 Swol_0348 PF01966 HD domain Swol_0351 PF13197 Swol_0351 Swol_0352 PF16983 Swol_0352 Swol_0353 PF00672 HAMP domain Swol_0353 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_0353 PF02743 Cache domain Swol_0353 PF13690 Chemotaxis phosphatase CheX Swol_0355 PF00072 Response regulator receiver domain Swol_0356 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Swol_0358 PF00591 Glycosyl transferase family, a/b domain Swol_0358 PF02885 Glycosyl transferase family, helical bundle domain Swol_0359 PF00218 Indole-3-glycerol phosphate synthase Swol_0360 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Swol_0361 PF00291 Pyridoxal-phosphate dependent enzyme Swol_0362 PF00290 Tryptophan synthase alpha chain Swol_0363 PF00793 DAHP synthetase I family Swol_0364 PF00117 Glutamine amidotransferase class-I Swol_0364 PF00425 chorismate binding enzyme Swol_0364 PF04715 Anthranilate synthase component I, N terminal region Swol_0365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Swol_0365 PF00672 HAMP domain Swol_0365 PF12729 Swol_0365 Swol_0366 PF06541 Swol_0366 Swol_0367 PF01713 Smr domain Swol_0368 PF00580 UvrD/REP helicase N-terminal domain Swol_0368 PF13361 UvrD-like helicase C-terminal domain Swol_0369 PF00533 BRCA1 C Terminus (BRCT) domain Swol_0369 PF01653 NAD-dependent DNA ligase adenylation domain Swol_0369 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Swol_0369 PF03120 NAD-dependent DNA ligase OB-fold domain Swol_0369 PF12826 Helix-hairpin-helix motif Swol_0369 PF14520 Helix-hairpin-helix domain Swol_0371 PF04474 Swol_0371 Swol_0372 PF02686 Glu-tRNAGln amidotransferase C subunit Swol_0373 PF01425 Amidase Swol_0374 PF02637 GatB domain Swol_0374 PF02934 GatB/GatE catalytic domain Swol_0375 PF00682 HMGL-like Swol_0376 PF00330 Aconitase family (aconitate hydratase) Swol_0377 PF00694 Aconitase C-terminal domain Swol_0378 PF00180 Isocitrate/isopropylmalate dehydrogenase Swol_0380 PF02219 Methylenetetrahydrofolate reductase Swol_0381 PF00072 Response regulator receiver domain Swol_0381 PF00512 His Kinase A (phospho-acceptor) domain Swol_0381 PF01627 Hpt domain Swol_0381 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_0382 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Swol_0382 PF07833 Copper amine oxidase N-terminal domain Swol_0383 PF01184 Swol_0383 Swol_0384 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Swol_0384 PF02770 Acyl-CoA dehydrogenase, middle domain Swol_0384 PF12806 Swol_0384 Swol_0385 PF13411 MerR HTH family regulatory protein Swol_0386 PF00012 Hsp70 protein Swol_0390 PF05708 Orthopoxvirus protein of unknown function (DUF830) Swol_0392 PF06769 Plasmid encoded toxin Txe Swol_0393 PF04221 RelB antitoxin Swol_0394 PF13534 4Fe-4S dicluster domain Swol_0395 PF02754 Swol_0395 Swol_0396 PF12831 FAD dependent oxidoreductase Swol_0397 PF00037 4Fe-4S binding domain Swol_0397 PF07992 Pyridine nucleotide-disulphide oxidoreductase Swol_0397 PF12838 4Fe-4S dicluster domain Swol_0398 PF02662 Swol_0398 Swol_0399 PF02662 Swol_0399 Swol_0400 PF13534 4Fe-4S dicluster domain Swol_0401 PF17179 Swol_0401 Swol_0402 PF00175 Oxidoreductase NAD-binding domain Swol_0402 PF00970 Oxidoreductase FAD-binding domain Swol_0402 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Swol_0403 PF00528 Binding-protein-dependent transport system inner membrane component Swol_0404 PF00528 Binding-protein-dependent transport system inner membrane component Swol_0405 PF01547 Bacterial extracellular solute-binding protein Swol_0406 PF00148 Nitrogenase component 1 type Oxidoreductase Swol_0407 PF00148 Nitrogenase component 1 type Oxidoreductase Swol_0408 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Swol_0409 PF00005 ABC transporter Swol_0410 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component Swol_0411 PF01869 BadF/BadG/BcrA/BcrD ATPase family Swol_0412 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component Swol_0413 PF12683 Protein of unknown function (DUF3798) Swol_0414 PF00005 ABC transporter Swol_0415 PF02653 Swol_0415 Swol_0416 PF02653 Swol_0416 Swol_0417 PF01208 Uroporphyrinogen decarboxylase (URO-D) Swol_0418 PF02310 B12 binding domain Swol_0418 PF02607 B12 binding domain Swol_0419 PF01208 Uroporphyrinogen decarboxylase (URO-D) Swol_0420 PF00111 2Fe-2S iron-sulfur cluster binding domain Swol_0420 PF14574 Domain of unknown function (DUF4445) Swol_0421 PF02492 CobW/HypB/UreG, nucleotide-binding domain Swol_0421 PF07683 Cobalamin synthesis protein cobW C-terminal domain Swol_0422 PF01208 Uroporphyrinogen decarboxylase (URO-D) Swol_0423 PF13407 Periplasmic binding protein domain Swol_0424 PF02653 Swol_0424 Swol_0425 PF02653 Swol_0425 Swol_0426 PF00005 ABC transporter Swol_0427 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component Swol_0428 PF01869 BadF/BadG/BcrA/BcrD ATPase family Swol_0429 PF03965 Penicillinase repressor Swol_0430 PF00665 Integrase core domain Swol_0430 PF13276 Swol_0430 Swol_0431 PF05569 BlaR1 peptidase M56 Swol_0432 PF06769 Plasmid encoded toxin Txe Swol_0433 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Swol_0435 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Swol_0436 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Swol_0436 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Swol_0437 PF00158 Sigma-54 interaction domain Swol_0437 PF02954 Bacterial regulatory protein, Fis family Swol_0438 PF00753 Metallo-beta-lactamase superfamily Swol_0440 PF00202 Aminotransferase class-III Swol_0441 PF06938 Protein of unknown function (DUF1285) Swol_0442 PF02645 Uncharacterised protein, DegV family COG1307 Swol_0443 PF04055 Radical SAM superfamily Swol_0444 PF00072 Response regulator receiver domain Swol_0444 PF04397 LytTr DNA-binding domain Swol_0446 PF13519 von Willebrand factor type A domain Swol_0447 PF10646 Swol_0447 Swol_0449 PF01177 Asp/Glu/Hydantoin racemase Swol_0450 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component Swol_0452 PF01869 BadF/BadG/BcrA/BcrD ATPase family Swol_0453 PF01138 3' exoribonuclease family, domain 1 Swol_0453 PF03725 3' exoribonuclease family, domain 2 Swol_0454 PF01725 Ham1 family Swol_0455 PF12850 Calcineurin-like phosphoesterase superfamily domain Swol_0456 PF00158 Sigma-54 interaction domain Swol_0456 PF02954 Bacterial regulatory protein, Fis family Swol_0456 PF13426 PAS domain Swol_0459 PF05239 PRC-barrel domain Swol_0460 PF07501 G5 domain Swol_0460 PF12229 Putative peptidoglycan binding domain Swol_0461 PF02583 Metal-sensitive transcriptional repressor Swol_0462 PF00085 Thioredoxin Swol_0463 PF05496 Holliday junction DNA helicase ruvB N-terminus Swol_0463 PF12002 MgsA AAA+ ATPase C terminal Swol_0463 PF16193 Swol_0463 Swol_0464 PF03054 tRNA methyl transferase Swol_0465 PF05239 PRC-barrel domain Swol_0467 PF01594 Swol_0467 Swol_0468 PF01411 tRNA synthetases class II (A) Swol_0468 PF02272 DHHA1 domain Swol_0468 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Swol_0469 PF06135 Swol_0469 Swol_0470 PF03652 Uncharacterised protein family (UPF0081) Swol_0471 PF06949 Swol_0471 Swol_0472 PF04294 Swol_0472 Swol_0472 PF07501 G5 domain Swol_0472 PF12229 Putative peptidoglycan binding domain Swol_0473 PF02618 YceG-like family Swol_0474 PF01136 Swol_0474 Swol_0474 PF16325 Swol_0474 Swol_0475 PF00271 Helicase conserved C-terminal domain Swol_0475 PF04851 Type III restriction enzyme, res subunit Swol_0476 PF09704 CRISPR-associated protein (Cas_Cas5) Swol_0477 PF09709 Swol_0477 Swol_0478 PF05107 Swol_0478 Swol_0479 PF01930 Domain of unknown function DUF83 Swol_0480 PF01867 CRISPR associated protein Cas1 Swol_0481 PF09827 CRISPR associated protein Cas2 Swol_0482 PF05015 Plasmid maintenance system killer protein Swol_0483 PF01381 Helix-turn-helix Swol_0483 PF06114 Domain of unknown function (DUF955) Swol_0484 PF01695 IstB-like ATP binding protein Swol_0485 PF00665 Integrase core domain Swol_0486 PF16256 Swol_0486 Swol_0488 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Swol_0488 PF02770 Acyl-CoA dehydrogenase, middle domain Swol_0488 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Swol_0489 PF00905 Penicillin binding protein transpeptidase domain Swol_0489 PF03717 Penicillin-binding Protein dimerisation domain Swol_0490 PF00012 Hsp70 protein Swol_0491 PF00226 DnaJ domain Swol_0491 PF01556 DnaJ C terminal domain Swol_0492 PF13591 MerR HTH family regulatory protein Swol_0493 PF00004 ATPase family associated with various cellular activities (AAA) Swol_0493 PF02861 Clp amino terminal domain Swol_0493 PF07724 AAA domain (Cdc48 subfamily) Swol_0493 PF10431 C-terminal, D2-small domain, of ClpB protein Swol_0495 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Swol_0496 PF05016 Plasmid stabilisation system protein Swol_0497 PF01131 DNA topoisomerase Swol_0497 PF01751 Toprim domain Swol_0499 PF01909 Nucleotidyltransferase domain Swol_0500 PF05168 HEPN domain Swol_0501 PF04542 Sigma-70 region 2 Swol_0502 PF12183 Restriction endonuclease NotI Swol_0503 PF02086 D12 class N6 adenine-specific DNA methyltransferase Swol_0506 PF02371 Swol_0506 Swol_0507 PF00580 UvrD/REP helicase N-terminal domain Swol_0507 PF13361 UvrD-like helicase C-terminal domain Swol_0508 PF14355 Swol_0508 Swol_0511 PF00270 DEAD/DEAH box helicase Swol_0511 PF00271 Helicase conserved C-terminal domain Swol_0511 PF09369 Swol_0511 Swol_0512 PF02384 N-6 DNA Methylase Swol_0512 PF12161 HsdM N-terminal domain Swol_0514 PF05598 Swol_0514 Swol_0514 PF13751 Swol_0514 Swol_0515 PF01420 Type I restriction modification DNA specificity domain Swol_0516 PF00271 Helicase conserved C-terminal domain Swol_0516 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) Swol_0516 PF04851 Type III restriction enzyme, res subunit Swol_0516 PF08463 Swol_0516 Swol_0516 PF13643 Swol_0516 Swol_0517 PF04542 Sigma-70 region 2 Swol_0517 PF04545 Sigma-70, region 4 Swol_0519 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain Swol_0519 PF00364 Biotin-requiring enzyme Swol_0519 PF00682 HMGL-like Swol_0519 PF02436 Conserved carboxylase domain Swol_0519 PF02785 Biotin carboxylase C-terminal domain Swol_0519 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Swol_0521 PF01609 Transposase DDE domain Swol_0521 PF05598 Swol_0521 Swol_0522 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain Swol_0522 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain Swol_0523 PF09419 Swol_0523 Swol_0524 PF08501 Shikimate dehydrogenase substrate binding domain Swol_0525 PF12019 Type II transport protein GspH Swol_0526 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Swol_0527 PF01264 Chorismate synthase Swol_0528 PF01202 Shikimate kinase Swol_0529 PF01761 3-dehydroquinate synthase Swol_0531 PF00437 Type II/IV secretion system protein Swol_0532 PF00437 Type II/IV secretion system protein Swol_0533 PF00482 Type II secretion system (T2SS), protein F Swol_0534 PF07963 Prokaryotic N-terminal methylation motif Swol_0536 PF07963 Prokaryotic N-terminal methylation motif Swol_0537 PF14341 Swol_0537 Swol_0538 PF01478 Type IV leader peptidase family Swol_0538 PF06750 Swol_0538 Swol_0539 PF11104 Type IV pilus assembly protein PilM; Swol_0540 PF05137 Swol_0540 Swol_0542 PF01523 Putative modulator of DNA gyrase Swol_0543 PF01523 Putative modulator of DNA gyrase Swol_0544 PF01220 Dehydroquinase class II Swol_0545 PF00557 Metallopeptidase family M24 Swol_0545 PF01321 Creatinase/Prolidase N-terminal domain Swol_0546 PF01132 Elongation factor P (EF-P) OB domain Swol_0546 PF08207 Elongation factor P (EF-P) KOW-like domain Swol_0546 PF09285 Elongation factor P, C-terminal Swol_0548 PF01909 Nucleotidyltransferase domain Swol_0549 PF01934 Protein of unknown function DUF86 Swol_0551 PF09548 Swol_0551 Swol_0552 PF06686 Swol_0552 Swol_0553 PF06686 Swol_0553 Swol_0554 PF09546 Swol_0554 Swol_0555 PF09581 Swol_0555 Swol_0557 PF12685 SpoIIIAH-like protein Swol_0558 PF00364 Biotin-requiring enzyme Swol_0558 PF00682 HMGL-like Swol_0558 PF02436 Conserved carboxylase domain Swol_0559 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain Swol_0559 PF02785 Biotin carboxylase C-terminal domain Swol_0559 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Swol_0561 PF03780 Swol_0561 Swol_0563 PF10031 Swol_0563 Swol_0564 PF01029 NusB family Swol_0565 PF00814 Glycoprotease family Swol_0566 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Swol_0566 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Swol_0567 PF02601 Swol_0567 Swol_0567 PF13742 Swol_0567 Swol_0568 PF02609 Exonuclease VII small subunit Swol_0569 PF00348 Polyprenyl synthetase Swol_0572 PF05534 Swol_0572 Swol_0572 PF15919 Swol_0572 Swol_0573 PF07927 YcfA-like protein Swol_0575 PF01554 MatE Swol_0576 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Swol_0577 PF05016 Plasmid stabilisation system protein Swol_0582 PF02779 Transketolase, pyrimidine binding domain Swol_0582 PF02780 Transketolase, C-terminal domain Swol_0582 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Swol_0583 PF01479 S4 domain Swol_0583 PF01728 FtsJ-like methyltransferase Swol_0584 PF01513 ATP-NAD kinase Swol_0585 PF01316 Arginine repressor, DNA binding domain Swol_0585 PF02863 Arginine repressor, C-terminal domain Swol_0587 PF02463 RecF/RecN/SMC N terminal domain Swol_0588 PF00011 Hsp20/alpha crystallin family Swol_0589 PF05580 Swol_0589 Swol_0590 PF00072 Response regulator receiver domain Swol_0590 PF08769 Sporulation initiation factor Spo0A C terminal Swol_0591 PF12555 Swol_0591 Swol_0592 PF11382 Swol_0592 Swol_0593 PF00535 Glycosyl transferase family 2 Swol_0594 PF00953 Glycosyl transferase family 4 Swol_0595 PF01546 Peptidase family M20/M25/M40 Swol_0595 PF07687 Peptidase dimerisation domain Swol_0596 PF12982 Swol_0596 Swol_0597 PF00293 NUDIX domain Swol_0598 PF13263 PHP-associated Swol_0600 PF00072 Response regulator receiver domain Swol_0600 PF00990 GGDEF domain Swol_0601 PF00072 Response regulator receiver domain Swol_0601 PF00512 His Kinase A (phospho-acceptor) domain Swol_0601 PF01590 GAF domain Swol_0601 PF01627 Hpt domain Swol_0601 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_0601 PF08447 PAS fold Swol_0601 PF08448 PAS fold Swol_0601 PF13426 PAS domain Swol_0602 PF00571 CBS domain Swol_0602 PF01368 DHH family Swol_0602 PF02833 DHHA2 domain Swol_0603 PF01909 Nucleotidyltransferase domain Swol_0604 PF01934 Protein of unknown function DUF86 Swol_0605 PF01944 Swol_0605 Swol_0607 PF00589 Phage integrase family Swol_0607 PF02899 Phage integrase, N-terminal SAM-like domain Swol_0608 PF01676 Metalloenzyme superfamily Swol_0609 PF00591 Glycosyl transferase family, a/b domain Swol_0609 PF02885 Glycosyl transferase family, helical bundle domain Swol_0609 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Swol_0612 PF00768 D-alanyl-D-alanine carboxypeptidase Swol_0612 PF07943 Penicillin-binding protein 5, C-terminal domain Swol_0613 PF01740 STAS domain Swol_0614 PF13581 Histidine kinase-like ATPase domain Swol_0615 PF04539 Sigma-70 region 3 Swol_0615 PF04542 Sigma-70 region 2 Swol_0615 PF04545 Sigma-70, region 4 Swol_0616 PF14879 Swol_0616 Swol_0617 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Swol_0617 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Swol_0617 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Swol_0618 PF01370 NAD dependent epimerase/dehydratase family Swol_0619 PF01370 NAD dependent epimerase/dehydratase family Swol_0620 PF15919 Swol_0620 Swol_0621 PF07927 YcfA-like protein Swol_0622 PF00852 Glycosyltransferase family 10 (fucosyltransferase) Swol_0623 PF00122 E1-E2 ATPase Swol_0623 PF00689 Cation transporting ATPase, C-terminus Swol_0623 PF00690 Cation transporter/ATPase, N-terminus Swol_0623 PF00702 haloacid dehalogenase-like hydrolase Swol_0624 PF00535 Glycosyl transferase family 2 Swol_0625 PF07311 Dodecin Swol_0626 PF03862 Swol_0626 Swol_0627 PF07451 Stage V sporulation protein AD (SpoVAD) Swol_0628 PF03862 Swol_0628 Swol_0629 PF03323 Swol_0629 Swol_0631 PF09989 Swol_0631 Swol_0632 PF01869 BadF/BadG/BcrA/BcrD ATPase family Swol_0633 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Swol_0633 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Swol_0633 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Swol_0634 PF01370 NAD dependent epimerase/dehydratase family Swol_0635 PF00535 Glycosyl transferase family 2 Swol_0636 PF13524 Glycosyl transferases group 1 Swol_0638 PF01909 Nucleotidyltransferase domain Swol_0639 PF08543 Phosphomethylpyrimidine kinase Swol_0640 PF02110 Hydroxyethylthiazole kinase family Swol_0641 PF02581 Thiamine monophosphate synthase/TENI Swol_0642 PF12710 haloacid dehalogenase-like hydrolase Swol_0643 PF01964 ThiC family Swol_0644 PF00291 Pyridoxal-phosphate dependent enzyme Swol_0645 PF12847 Methyltransferase domain Swol_0646 PF01784 NIF3 (NGG1p interacting factor 3) Swol_0647 PF01966 HD domain Swol_0648 PF00216 Bacterial DNA-binding protein Swol_0649 PF00111 2Fe-2S iron-sulfur cluster binding domain Swol_0649 PF14574 Domain of unknown function (DUF4445) Swol_0650 PF00378 Enoyl-CoA hydratase/isomerase family Swol_0651 PF13561 Enoyl-(Acyl carrier protein) reductase Swol_0652 PF06245 Swol_0652 Swol_0654 PF01699 Sodium/calcium exchanger protein Swol_0655 PF06133 Protein of unknown function (DUF964) Swol_0656 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin Swol_0657 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Swol_0657 PF10531 SLBB domain Swol_0657 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Swol_0657 PF12838 4Fe-4S dicluster domain Swol_0658 PF00037 4Fe-4S binding domain Swol_0658 PF07992 Pyridine nucleotide-disulphide oxidoreductase Swol_0658 PF13510 2Fe-2S iron-sulfur cluster binding domain Swol_0658 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Swol_0659 PF13145 PPIC-type PPIASE domain Swol_0659 PF13624 SurA N-terminal domain Swol_0660 PF01475 Ferric uptake regulator family Swol_0661 PF02421 Ferrous iron transport protein B Swol_0661 PF07664 Swol_0661 Swol_0661 PF07670 Nucleoside recognition Swol_0662 PF04023 FeoA domain Swol_0663 PF10609 ParA/MinD ATPase like Swol_0664 PF00005 ABC transporter Swol_0665 PF01458 Uncharacterized protein family (UPF0051) Swol_0666 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Swol_0666 PF03466 LysR substrate binding domain Swol_0667 PF01862 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) Swol_0668 PF01564 Spermine/spermidine synthase Swol_0668 PF17284 Swol_0668 Swol_0669 PF00491 Arginase family Swol_0670 PF02915 Rubrerythrin Swol_0672 PF00579 tRNA synthetases class I (W and Y) Swol_0674 PF02675 S-adenosylmethionine decarboxylase Swol_0675 PF00108 Thiolase, N-terminal domain Swol_0675 PF02803 Thiolase, C-terminal domain Swol_0676 PF00348 Polyprenyl synthetase Swol_0677 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Swol_0678 PF01040 UbiA prenyltransferase family Swol_0679 PF02441 Flavoprotein Swol_0680 PF00348 Polyprenyl synthetase Swol_0681 PF00902 Sec-independent protein translocase protein (TatC) Swol_0682 PF02416 mttA/Hcf106 family Swol_0683 PF10414 Sirohaem synthase dimerisation region Swol_0683 PF13241 Putative NAD(P)-binding Swol_0683 PF14824 Sirohaem biosynthesis protein central Swol_0685 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Swol_0685 PF03900 Porphobilinogen deaminase, C-terminal domain Swol_0687 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Swol_0687 PF02602 Uroporphyrinogen-III synthase HemD Swol_0688 PF04055 Radical SAM superfamily Swol_0688 PF13186 Iron-sulfur cluster-binding domain Swol_0688 PF13353 4Fe-4S single cluster domain Swol_0690 PF00490 Delta-aminolevulinic acid dehydratase Swol_0691 PF04055 Radical SAM superfamily Swol_0691 PF13186 Iron-sulfur cluster-binding domain Swol_0691 PF13353 4Fe-4S single cluster domain Swol_0692 PF13404 AsnC-type helix-turn-helix domain Swol_0693 PF13404 AsnC-type helix-turn-helix domain Swol_0694 PF00202 Aminotransferase class-III Swol_0695 PF01739 CheR methyltransferase, SAM binding domain Swol_0695 PF03705 CheR methyltransferase, all-alpha domain Swol_0696 PF01012 Electron transfer flavoprotein domain Swol_0697 PF00766 Electron transfer flavoprotein FAD-binding domain Swol_0697 PF01012 Electron transfer flavoprotein domain Swol_0698 PF02665 Nitrate reductase gamma subunit Swol_0698 PF02754 Swol_0698 Swol_0698 PF13183 4Fe-4S dicluster domain Swol_0699 PF01467 Cytidylyltransferase Swol_0700 PF12910 Antitoxin of toxin-antitoxin stability system N-terminal Swol_0702 PF05635 23S rRNA-intervening sequence protein Swol_0703 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Swol_0704 PF00132 Bacterial transferase hexapeptide (six repeats) Swol_0705 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Swol_0705 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Swol_0705 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Swol_0706 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Swol_0706 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Swol_0707 PF16363 Swol_0707 Swol_0708 PF01266 FAD dependent oxidoreductase Swol_0709 PF01609 Transposase DDE domain Swol_0709 PF05598 Swol_0709 Swol_0710 PF01370 NAD dependent epimerase/dehydratase family Swol_0711 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Swol_0712 PF00733 Asparagine synthase Swol_0712 PF13537 Glutamine amidotransferase domain Swol_0713 PF08241 Methyltransferase domain Swol_0715 PF13480 Acetyltransferase (GNAT) domain Swol_0716 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Swol_0717 PF00551 Formyl transferase Swol_0717 PF02911 Formyl transferase, C-terminal domain Swol_0718 PF05598 Swol_0718 Swol_0718 PF13751 Swol_0718 Swol_0720 PF01609 Transposase DDE domain Swol_0720 PF05598 Swol_0720 Swol_0722 PF13440 Swol_0722 Swol_0722 PF14667 Polysaccharide biosynthesis C-terminal domain Swol_0724 PF01548 Swol_0724 Swol_0724 PF02371 Swol_0724 Swol_0725 PF00534 Glycosyl transferases group 1 Swol_0725 PF13439 Glycosyltransferase Family 4 Swol_0726 PF02719 Polysaccharide biosynthesis protein Swol_0726 PF08485 Polysaccharide biosynthesis protein C-terminal Swol_0727 PF04321 RmlD substrate binding domain Swol_0728 PF02350 UDP-N-acetylglucosamine 2-epimerase Swol_0729 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family Swol_0730 PF00534 Glycosyl transferases group 1 Swol_0730 PF13579 Glycosyl transferase 4-like domain Swol_0731 PF00953 Glycosyl transferase family 4 Swol_0732 PF02698 DUF218 domain Swol_0734 PF01695 IstB-like ATP binding protein Swol_0734 PF08483 Swol_0734 Swol_0736 PF00589 Phage integrase family Swol_0736 PF02899 Phage integrase, N-terminal SAM-like domain Swol_0737 PF00665 Integrase core domain Swol_0738 PF00589 Phage integrase family Swol_0738 PF02899 Phage integrase, N-terminal SAM-like domain Swol_0739 PF00589 Phage integrase family Swol_0740 PF00589 Phage integrase family Swol_0741 PF01609 Transposase DDE domain Swol_0741 PF05598 Swol_0741 Swol_0743 PF04892 Swol_0743 Swol_0744 PF13614 AAA domain Swol_0746 PF14072 Swol_0746 Swol_0748 PF04754 Swol_0748 Swol_0749 PF14261 Swol_0749 Swol_0750 PF05685 Putative restriction endonuclease Swol_0751 PF00483 Nucleotidyl transferase Swol_0752 PF12841 Swol_0752 Swol_0753 PF11148 Swol_0753 Swol_0754 PF07872 Swol_0754 Swol_0755 PF00395 S-layer homology domain Swol_0755 PF07532 Swol_0755 Swol_0755 PF13290 Swol_0755 Swol_0756 PF01471 Putative peptidoglycan binding domain Swol_0756 PF06725 3D domain Swol_0757 PF00830 Ribosomal L28 family Swol_0758 PF03780 Swol_0758 Swol_0759 PF02734 DAK2 domain Swol_0759 PF13684 Dihydroxyacetone kinase family Swol_0760 PF00269 Small, acid-soluble spore proteins, alpha/beta type Swol_0761 PF03418 Germination protease Swol_0765 PF01734 Patatin-like phospholipase Swol_0766 PF05636 HIGH Nucleotidyl Transferase Swol_0767 PF01515 Phosphate acetyl/butaryl transferase Swol_0768 PF00871 Acetokinase family Swol_0769 PF02620 Swol_0769 Swol_0770 PF01783 Ribosomal L32p protein family Swol_0771 PF02504 Fatty acid synthesis protein Swol_0772 PF00550 Phosphopantetheine attachment site Swol_0773 PF00035 Double-stranded RNA binding motif Swol_0773 PF14622 Ribonuclease-III-like Swol_0774 PF04055 Radical SAM superfamily Swol_0774 PF16199 Swol_0774 Swol_0775 PF02237 Biotin protein ligase C terminal domain Swol_0775 PF03099 Biotin/lipoate A/B protein ligase family Swol_0775 PF08279 HTH domain Swol_0776 PF02463 RecF/RecN/SMC N terminal domain Swol_0776 PF06470 SMC proteins Flexible Hinge Domain Swol_0777 PF00448 SRP54-type protein, GTPase domain Swol_0777 PF02881 SRP54-type protein, helical bundle domain Swol_0778 PF01048 Phosphorylase superfamily Swol_0779 PF01008 Initiation factor 2 subunit family Swol_0780 PF00596 Class II Aldolase and Adducin N-terminal domain Swol_0781 PF01979 Amidohydrolase family Swol_0782 PF03205 Molybdopterin guanine dinucleotide synthesis protein B Swol_0783 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin Swol_0784 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Swol_0784 PF10531 SLBB domain Swol_0784 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Swol_0785 PF00384 Molybdopterin oxidoreductase Swol_0785 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Swol_0785 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Swol_0785 PF13510 2Fe-2S iron-sulfur cluster binding domain Swol_0785 PF14697 4Fe-4S dicluster domain Swol_0786 PF00384 Molybdopterin oxidoreductase Swol_0786 PF01568 Molydopterin dinucleotide binding domain Swol_0787 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Swol_0787 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Swol_0788 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Swol_0788 PF02770 Acyl-CoA dehydrogenase, middle domain Swol_0788 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Swol_0789 PF00108 Thiolase, N-terminal domain Swol_0789 PF02803 Thiolase, C-terminal domain Swol_0790 PF00378 Enoyl-CoA hydratase/isomerase family Swol_0791 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Swol_0791 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Swol_0792 PF00158 Sigma-54 interaction domain Swol_0792 PF00989 PAS fold Swol_0792 PF02954 Bacterial regulatory protein, Fis family Swol_0792 PF13426 PAS domain Swol_0793 PF00989 PAS fold Swol_0794 PF07927 YcfA-like protein Swol_0796 PF04216 Protein involved in formate dehydrogenase formation Swol_0797 PF01292 Prokaryotic cytochrome b561 Swol_0798 PF13247 4Fe-4S dicluster domain Swol_0799 PF00384 Molybdopterin oxidoreductase Swol_0799 PF01568 Molydopterin dinucleotide binding domain Swol_0800 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Swol_0801 PF00994 Probable molybdopterin binding domain Swol_0801 PF03453 MoeA N-terminal region (domain I and II) Swol_0801 PF03454 MoeA C-terminal region (domain IV) Swol_0801 PF12727 PBP superfamily domain Swol_0802 PF00994 Probable molybdopterin binding domain Swol_0802 PF03453 MoeA N-terminal region (domain I and II) Swol_0802 PF03454 MoeA C-terminal region (domain IV) Swol_0803 PF00717 Peptidase S24-like Swol_0803 PF01381 Helix-turn-helix Swol_0805 PF01368 DHH family Swol_0805 PF02272 DHHA1 domain Swol_0806 PF02824 TGS domain Swol_0806 PF04607 Region found in RelA / SpoT proteins Swol_0806 PF13291 ACT domain Swol_0806 PF13328 HD domain Swol_0807 PF02580 D-Tyr-tRNA(Tyr) deacylase Swol_0808 PF00753 Metallo-beta-lactamase superfamily Swol_0809 PF00793 DAHP synthetase I family Swol_0810 PF00800 Prephenate dehydratase Swol_0810 PF01842 ACT domain Swol_0811 PF03129 Anticodon binding domain Swol_0811 PF13393 Histidyl-tRNA synthetase Swol_0812 PF00152 tRNA synthetases class II (D, K and N) Swol_0812 PF01336 OB-fold nucleic acid binding domain Swol_0812 PF02938 GAD domain Swol_0813 PF00899 ThiF family Swol_0814 PF00730 HhH-GPD superfamily base excision DNA repair protein Swol_0815 PF00501 AMP-binding enzyme Swol_0815 PF14535 AMP-binding enzyme C-terminal domain Swol_0816 PF01842 ACT domain Swol_0817 PF02381 MraZ protein Swol_0819 PF04977 Septum formation initiator Swol_0820 PF00905 Penicillin binding protein transpeptidase domain Swol_0820 PF03717 Penicillin-binding Protein dimerisation domain Swol_0820 PF03793 PASTA domain Swol_0821 PF01225 Mur ligase family, catalytic domain Swol_0821 PF02875 Mur ligase family, glutamate ligase domain Swol_0821 PF08245 Mur ligase middle domain Swol_0822 PF01225 Mur ligase family, catalytic domain Swol_0822 PF02875 Mur ligase family, glutamate ligase domain Swol_0822 PF08245 Mur ligase middle domain Swol_0823 PF00953 Glycosyl transferase family 4 Swol_0823 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Swol_0824 PF02875 Mur ligase family, glutamate ligase domain Swol_0824 PF08245 Mur ligase middle domain Swol_0825 PF01098 Swol_0825 Swol_0826 PF03033 Glycosyltransferase family 28 N-terminal domain Swol_0826 PF04101 Glycosyltransferase family 28 C-terminal domain Swol_0827 PF01225 Mur ligase family, catalytic domain Swol_0827 PF02875 Mur ligase family, glutamate ligase domain Swol_0827 PF08245 Mur ligase middle domain Swol_0828 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Swol_0829 PF08478 POTRA domain, FtsQ-type Swol_0830 PF05949 Bacterial protein of unknown function (DUF881) Swol_0831 PF06947 Swol_0831 Swol_0832 PF02491 SHS2 domain inserted in FTSA Swol_0832 PF14450 Cell division protein FtsA Swol_0833 PF00091 Tubulin/FtsZ family, GTPase domain Swol_0833 PF12327 FtsZ family, C-terminal domain Swol_0834 PF03419 Swol_0834 Swol_0835 PF04542 Sigma-70 region 2 Swol_0835 PF04545 Sigma-70, region 4 Swol_0836 PF04539 Sigma-70 region 3 Swol_0836 PF04542 Sigma-70 region 2 Swol_0836 PF04545 Sigma-70, region 4 Swol_0838 PF01555 DNA methylase Swol_0839 PF02481 DNA recombination-mediator protein A Swol_0840 PF01131 DNA topoisomerase Swol_0840 PF01396 Swol_0840 Swol_0840 PF01751 Toprim domain Swol_0841 PF01134 Glucose inhibited division protein A Swol_0842 PF00589 Phage integrase family Swol_0842 PF02899 Phage integrase, N-terminal SAM-like domain Swol_0843 PF00227 Proteasome subunit Swol_0844 PF07724 AAA domain (Cdc48 subfamily) Swol_0844 PF10431 C-terminal, D2-small domain, of ClpB protein Swol_0845 PF06018 CodY GAF-like domain Swol_0845 PF08222 CodY helix-turn-helix domain Swol_0846 PF00460 Flagella basal body rod protein Swol_0847 PF00460 Flagella basal body rod protein Swol_0847 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Swol_0848 PF02049 Swol_0848 Swol_0849 PF01514 Secretory protein of YscJ/FliF family Swol_0849 PF08345 Swol_0849 Swol_0851 PF02108 Swol_0851 Swol_0852 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Swol_0852 PF02874 ATP synthase alpha/beta family, beta-barrel domain Swol_0853 PF02050 Flagellar FliJ protein Swol_0854 PF03448 MgtE intracellular N domain Swol_0855 PF02120 Flagellar hook-length control protein FliK Swol_0856 PF03963 Swol_0856 Swol_0857 PF12611 Swol_0857 Swol_0858 PF00460 Flagella basal body rod protein Swol_0858 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Swol_0858 PF07559 Flagellar basal body protein FlaE Swol_0859 PF06289 Swol_0859 Swol_0860 PF03748 Swol_0860 Swol_0861 PF01052 Surface presentation of antigens (SPOA) Swol_0861 PF02154 Flagellar motor switch protein FliM Swol_0862 PF01052 Surface presentation of antigens (SPOA) Swol_0862 PF04509 CheC-like family Swol_0863 PF00072 Response regulator receiver domain Swol_0864 PF04347 Swol_0864 Swol_0865 PF00813 Swol_0865 Swol_0866 PF01313 Swol_0866 Swol_0867 PF01311 Swol_0867 Swol_0868 PF01312 FlhB HrpN YscU SpaS Family Swol_0869 PF00771 FHIPEP family Swol_0870 PF00448 SRP54-type protein, GTPase domain Swol_0871 PF13614 AAA domain Swol_0872 PF07238 PilZ domain Swol_0872 PF12945 Flagellar protein YcgR Swol_0873 PF00072 Response regulator receiver domain Swol_0873 PF01339 CheB methylesterase Swol_0874 PF01584 CheW-like domain Swol_0874 PF01627 Hpt domain Swol_0874 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_0874 PF02895 Signal transducing histidine kinase, homodimeric domain Swol_0874 PF07194 P2 response regulator binding domain Swol_0875 PF01584 CheW-like domain Swol_0876 PF04509 CheC-like family Swol_0877 PF03975 CheD chemotactic sensory transduction Swol_0878 PF04539 Sigma-70 region 3 Swol_0878 PF04542 Sigma-70 region 2 Swol_0878 PF04545 Sigma-70, region 4 Swol_0879 PF03961 Swol_0879 Swol_0881 PF04760 Translation initiation factor IF-2, N-terminal region Swol_0882 PF00318 Ribosomal protein S2 Swol_0883 PF00889 Elongation factor TS Swol_0884 PF00696 Amino acid kinase family Swol_0885 PF01765 Ribosome recycling factor Swol_0886 PF01255 Putative undecaprenyl diphosphate synthase Swol_0887 PF01148 Cytidylyltransferase family Swol_0888 PF01594 Swol_0888 Swol_0889 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Swol_0889 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal Swol_0889 PF13288 DXP reductoisomerase C-terminal domain Swol_0890 PF02163 Peptidase family M50 Swol_0890 PF13180 PDZ domain Swol_0891 PF04551 GcpE protein Swol_0892 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Swol_0892 PF03129 Anticodon binding domain Swol_0892 PF04073 Aminoacyl-tRNA editing domain Swol_0894 PF02308 Swol_0894 Swol_0895 PF02811 PHP domain Swol_0895 PF07733 Bacterial DNA polymerase III alpha subunit Swol_0895 PF14480 Swol_0895 Swol_0895 PF14579 Helix-hairpin-helix motif Swol_0896 PF02576 Uncharacterised BCR, YhbC family COG0779 Swol_0896 PF17384 Swol_0896 Swol_0897 PF00575 S1 RNA binding domain Swol_0897 PF08529 NusA N-terminal domain Swol_0897 PF13184 NusA-like KH domain Swol_0898 PF04296 Protein of unknown function (DUF448) Swol_0900 PF00009 Elongation factor Tu GTP binding domain Swol_0900 PF04760 Translation initiation factor IF-2, N-terminal region Swol_0900 PF11987 Translation-initiation factor 2 Swol_0901 PF02033 Ribosome-binding factor A Swol_0902 PF01368 DHH family Swol_0902 PF02272 DHHA1 domain Swol_0903 PF01509 TruB family pseudouridylate synthase (N terminal domain) Swol_0903 PF09157 Pseudouridine synthase II TruB, C-terminal Swol_0903 PF16198 Swol_0903 Swol_0904 PF01687 Riboflavin kinase Swol_0904 PF06574 FAD synthetase Swol_0905 PF00312 Ribosomal protein S15 Swol_0906 PF00013 KH domain Swol_0906 PF00575 S1 RNA binding domain Swol_0906 PF01138 3' exoribonuclease family, domain 1 Swol_0906 PF03725 3' exoribonuclease family, domain 2 Swol_0906 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Swol_0907 PF04294 Swol_0907 Swol_0908 PF01522 Polysaccharide deacetylase Swol_0909 PF00768 D-alanyl-D-alanine carboxypeptidase Swol_0909 PF07943 Penicillin-binding protein 5, C-terminal domain Swol_0910 PF00675 Insulinase (Peptidase family M16) Swol_0910 PF05193 Peptidase M16 inactive domain Swol_0911 PF00692 dUTPase Swol_0912 PF05239 PRC-barrel domain Swol_0913 PF02386 Cation transport protein Swol_0914 PF02080 TrkA-C domain Swol_0914 PF02254 TrkA-N domain Swol_0916 PF00478 IMP dehydrogenase / GMP reductase domain Swol_0916 PF00571 CBS domain Swol_0917 PF02308 Swol_0917 Swol_0918 PF00269 Small, acid-soluble spore proteins, alpha/beta type Swol_0919 PF04055 Radical SAM superfamily Swol_0920 PF01865 Protein of unknown function DUF47 Swol_0921 PF00905 Penicillin binding protein transpeptidase domain Swol_0921 PF00912 Transglycosylase Swol_0922 PF03591 Swol_0922 Swol_0923 PF05437 Swol_0923 Swol_0924 PF00753 Metallo-beta-lactamase superfamily Swol_0925 PF05362 Lon protease (S16) C-terminal proteolytic domain Swol_0925 PF13654 AAA domain Swol_0927 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Swol_0927 PF17202 Swol_0927 Swol_0928 PF09963 Swol_0928 Swol_0929 PF12146 Putative lysophospholipase Swol_0930 PF00749 tRNA synthetases class I (E and Q), catalytic domain Swol_0931 PF09560 Swol_0931 Swol_0933 PF01717 Cobalamin-independent synthase, Catalytic domain Swol_0933 PF08267 Cobalamin-independent synthase, N-terminal domain Swol_0934 PF02219 Methylenetetrahydrofolate reductase Swol_0935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Swol_0935 PF03466 LysR substrate binding domain Swol_0936 PF01022 Bacterial regulatory protein, arsR family Swol_0937 PF06953 Arsenical resistance operon trans-acting repressor ArsD Swol_0938 PF02374 Anion-transporting ATPase Swol_0939 PF01758 Sodium Bile acid symporter family Swol_0940 PF16654 Swol_0940 Swol_0941 PF00005 ABC transporter Swol_0943 PF02687 Swol_0943 Swol_0943 PF12704 MacB-like periplasmic core domain Swol_0944 PF04542 Sigma-70 region 2 Swol_0946 PF10135 Swol_0946 Swol_0947 PF00460 Flagella basal body rod protein Swol_0947 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Swol_0948 PF05239 PRC-barrel domain Swol_0949 PF03477 ATP cone domain Swol_0951 PF00072 Response regulator receiver domain Swol_0951 PF00486 Transcriptional regulatory protein, C terminal Swol_0952 PF00512 His Kinase A (phospho-acceptor) domain Swol_0952 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_0952 PF08448 PAS fold Swol_0953 PF01168 Alanine racemase, N-terminal domain Swol_0954 PF04472 Protein of unknown function (DUF552) Swol_0955 PF03807 NADP oxidoreductase coenzyme F420-dependent Swol_0955 PF14748 Pyrroline-5-carboxylate reductase dimerisation Swol_0956 PF02325 Swol_0956 Swol_0957 PF01136 Swol_0957 Swol_0958 PF05103 DivIVA protein Swol_0959 PF02594 Uncharacterised ACR, YggU family COG1872 Swol_0960 PF00892 EamA-like transporter family Swol_0961 PF00633 Helix-hairpin-helix motif Swol_0961 PF00730 HhH-GPD superfamily base excision DNA repair protein Swol_0962 PF00133 tRNA synthetases class I (I, L, M and V) Swol_0962 PF06827 Zinc finger found in FPG and IleRS Swol_0962 PF08264 Anticodon-binding domain of tRNA Swol_0964 PF01258 Prokaryotic dksA/traR C4-type zinc finger Swol_0965 PF00534 Glycosyl transferases group 1 Swol_0965 PF13439 Glycosyltransferase Family 4 Swol_0966 PF08245 Mur ligase middle domain Swol_0966 PF08353 Swol_0966 Swol_0967 PF07685 CobB/CobQ-like glutamine amidotransferase domain Swol_0968 PF00348 Polyprenyl synthetase Swol_0969 PF10776 Swol_0969 Swol_0970 PF05979 Bacterial protein of unknown function (DUF896) Swol_0971 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Swol_0971 PF00672 HAMP domain Swol_0971 PF14827 Sensory domain of two-component sensor kinase Swol_0972 PF00919 Uncharacterized protein family UPF0004 Swol_0972 PF01938 TRAM domain Swol_0972 PF04055 Radical SAM superfamily Swol_0973 PF06133 Protein of unknown function (DUF964) Swol_0974 PF00488 MutS domain V Swol_0974 PF01624 MutS domain I Swol_0974 PF05188 MutS domain II Swol_0974 PF05190 MutS family domain IV Swol_0974 PF05192 MutS domain III Swol_0975 PF01968 Hydantoinase/oxoprolinase Swol_0975 PF05378 Swol_0975 Swol_0976 PF00850 Histone deacetylase domain Swol_0977 PF01119 DNA mismatch repair protein, C-terminal domain Swol_0977 PF08676 MutL C terminal dimerisation domain Swol_0977 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_0978 PF04445 Putative SAM-dependent methyltransferase Swol_0979 PF01715 IPP transferase Swol_0980 PF17209 Swol_0980 Swol_0983 PF00004 ATPase family associated with various cellular activities (AAA) Swol_0984 PF13173 AAA domain Swol_0984 PF13635 Swol_0984 Swol_0986 PF08843 Nucleotidyl transferase of unknown function (DUF1814) Swol_0988 PF08849 Putative inner membrane protein (DUF1819) Swol_0993 PF04471 Restriction endonuclease Swol_0995 PF01527 Transposase Swol_0996 PF00665 Integrase core domain Swol_0996 PF13276 Swol_0996 Swol_0998 PF08665 Swol_0998 Swol_0999 PF05362 Lon protease (S16) C-terminal proteolytic domain Swol_0999 PF13337 Swol_0999 Swol_1000 PF01230 HIT domain Swol_1001 PF00271 Helicase conserved C-terminal domain Swol_1001 PF04851 Type III restriction enzyme, res subunit Swol_1002 PF03683 Swol_1002 Swol_1005 PF06838 Methionine gamma-lyase Swol_1006 PF04306 Swol_1006 Swol_1007 PF00120 Glutamine synthetase, catalytic domain Swol_1007 PF03951 Glutamine synthetase, beta-Grasp domain Swol_1008 PF00717 Peptidase S24-like Swol_1008 PF01726 LexA DNA binding domain Swol_1009 PF15919 Swol_1009 Swol_1010 PF07927 YcfA-like protein Swol_1011 PF01171 PP-loop family Swol_1012 PF02754 Swol_1012 Swol_1012 PF13183 4Fe-4S dicluster domain Swol_1013 PF01565 FAD binding domain Swol_1013 PF02913 FAD linked oxidases, C-terminal domain Swol_1014 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Swol_1014 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Swol_1015 PF01565 FAD binding domain Swol_1015 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Swol_1016 PF02310 B12 binding domain Swol_1016 PF04055 Radical SAM superfamily Swol_1016 PF13311 Swol_1016 Swol_1017 PF02256 Iron hydrogenase small subunit Swol_1017 PF02906 Iron only hydrogenase large subunit, C-terminal domain Swol_1017 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Swol_1017 PF13187 4Fe-4S dicluster domain Swol_1017 PF13510 2Fe-2S iron-sulfur cluster binding domain Swol_1018 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Swol_1018 PF10531 SLBB domain Swol_1018 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Swol_1019 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin Swol_1020 PF04055 Radical SAM superfamily Swol_1020 PF06968 Biotin and Thiamin Synthesis associated domain Swol_1022 PF04055 Radical SAM superfamily Swol_1022 PF06968 Biotin and Thiamin Synthesis associated domain Swol_1024 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Swol_1024 PF10531 SLBB domain Swol_1024 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Swol_1025 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin Swol_1026 PF00994 Probable molybdopterin binding domain Swol_1026 PF03453 MoeA N-terminal region (domain I and II) Swol_1026 PF03454 MoeA C-terminal region (domain IV) Swol_1027 PF00994 Probable molybdopterin binding domain Swol_1028 PF00384 Molybdopterin oxidoreductase Swol_1028 PF01568 Molydopterin dinucleotide binding domain Swol_1029 PF00384 Molybdopterin oxidoreductase Swol_1029 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Swol_1029 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Swol_1029 PF12838 4Fe-4S dicluster domain Swol_1029 PF13510 2Fe-2S iron-sulfur cluster binding domain Swol_1030 PF02634 FdhD/NarQ family Swol_1031 PF01066 CDP-alcohol phosphatidyltransferase Swol_1032 PF00293 NUDIX domain Swol_1033 PF02146 Sir2 family Swol_1034 PF00877 NlpC/P60 family Swol_1035 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Swol_1035 PF08388 Swol_1035 Swol_1038 PF00112 Papain family cysteine protease Swol_1039 PF04367 Swol_1039 Swol_1040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_1040 PF02906 Iron only hydrogenase large subunit, C-terminal domain Swol_1041 PF00072 Response regulator receiver domain Swol_1041 PF01966 HD domain Swol_1043 PF00395 S-layer homology domain Swol_1043 PF02368 Bacterial Ig-like domain (group 2) Swol_1043 PF14478 Domain of unknown function (DUF4430) Swol_1044 PF14478 Domain of unknown function (DUF4430) Swol_1045 PF02361 Cobalt transport protein Swol_1046 PF00005 ABC transporter Swol_1047 PF07155 ECF-type riboflavin transporter, S component Swol_1048 PF01228 Glycine radical Swol_1048 PF02901 Pyruvate formate lyase Swol_1049 PF04055 Radical SAM superfamily Swol_1049 PF13353 4Fe-4S single cluster domain Swol_1050 PF02645 Uncharacterised protein, DegV family COG1307 Swol_1051 PF01545 Cation efflux family Swol_1051 PF16916 Swol_1051 Swol_1052 PF10646 Swol_1052 Swol_1052 PF10648 Swol_1052 Swol_1053 PF08447 PAS fold Swol_1053 PF10114 Swol_1053 Swol_1054 PF00512 His Kinase A (phospho-acceptor) domain Swol_1054 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_1054 PF13426 PAS domain Swol_1055 PF01797 Transposase IS200 like Swol_1056 PF01609 Transposase DDE domain Swol_1056 PF05598 Swol_1056 Swol_1059 PF00005 ABC transporter Swol_1060 PF14898 Swol_1060 Swol_1061 PF00753 Metallo-beta-lactamase superfamily Swol_1062 PF01510 N-acetylmuramoyl-L-alanine amidase Swol_1063 PF12953 Swol_1063 Swol_1064 PF03030 Inorganic H+ pyrophosphatase Swol_1067 PF00753 Metallo-beta-lactamase superfamily Swol_1068 PF01522 Polysaccharide deacetylase Swol_1069 PF01522 Polysaccharide deacetylase Swol_1070 PF00497 Bacterial extracellular solute-binding proteins, family 3 Swol_1071 PF00528 Binding-protein-dependent transport system inner membrane component Swol_1072 PF00005 ABC transporter Swol_1074 PF04221 RelB antitoxin Swol_1075 PF15738 Swol_1075 Swol_1076 PF02368 Bacterial Ig-like domain (group 2) Swol_1076 PF03442 Carbohydrate binding domain X2 Swol_1076 PF07581 Swol_1076 Swol_1076 PF13290 Swol_1076 Swol_1077 PF10387 Protein of unknown function (DUF2442) Swol_1078 PF02368 Bacterial Ig-like domain (group 2) Swol_1078 PF07581 Swol_1078 Swol_1078 PF13290 Swol_1078 Swol_1079 PF10387 Protein of unknown function (DUF2442) Swol_1080 PF00196 Bacterial regulatory proteins, luxR family Swol_1082 PF00571 CBS domain Swol_1082 PF01769 Divalent cation transporter Swol_1082 PF03448 MgtE intracellular N domain Swol_1083 PF08445 FR47-like protein Swol_1084 PF00501 AMP-binding enzyme Swol_1084 PF00550 Phosphopantetheine attachment site Swol_1084 PF00668 Condensation domain Swol_1084 PF07993 Male sterility protein Swol_1084 PF13193 AMP-binding enzyme C-terminal domain Swol_1085 PF01648 4'-phosphopantetheinyl transferase superfamily Swol_1086 PF00082 Subtilase family Swol_1087 PF08812 Swol_1087 Swol_1088 PF04286 Swol_1088 Swol_1089 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Swol_1089 PF02824 TGS domain Swol_1089 PF03129 Anticodon binding domain Swol_1089 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Swol_1090 PF00707 Translation initiation factor IF-3, C-terminal domain Swol_1090 PF05198 Translation initiation factor IF-3, N-terminal domain Swol_1091 PF01632 Ribosomal protein L35 Swol_1092 PF00453 Ribosomal protein L20 Swol_1093 PF00588 SpoU rRNA Methylase family Swol_1093 PF08032 RNA 2'-O ribose methyltransferase substrate binding Swol_1094 PF01409 tRNA synthetases class II core domain (F) Swol_1094 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Swol_1095 PF01409 tRNA synthetases class II core domain (F) Swol_1095 PF03147 Ferredoxin-fold anticodon binding domain Swol_1095 PF03483 B3/4 domain Swol_1095 PF03484 tRNA synthetase B5 domain Swol_1096 PF02156 Glycosyl hydrolase family 26 Swol_1097 PF00571 CBS domain Swol_1099 PF00561 alpha/beta hydrolase fold Swol_1100 PF01464 Transglycosylase SLT domain Swol_1101 PF00485 Phosphoribulokinase / Uridine kinase family Swol_1102 PF01909 Nucleotidyltransferase domain Swol_1103 PF01934 Protein of unknown function DUF86 Swol_1104 PF05164 Cell division protein ZapA Swol_1105 PF02811 PHP domain Swol_1105 PF14520 Helix-hairpin-helix domain Swol_1105 PF14716 Helix-hairpin-helix domain Swol_1106 PF04239 Protein of unknown function (DUF421) Swol_1107 PF01136 Swol_1107 Swol_1107 PF12392 Swol_1107 Swol_1108 PF00488 MutS domain V Swol_1108 PF01713 Smr domain Swol_1109 PF00905 Penicillin binding protein transpeptidase domain Swol_1109 PF00912 Transglycosylase Swol_1110 PF00579 tRNA synthetases class I (W and Y) Swol_1110 PF01479 S4 domain Swol_1112 PF00265 Thymidine kinase Swol_1113 PF02592 Swol_1113 Swol_1116 PF07728 AAA domain (dynein-related subfamily) Swol_1116 PF12102 Domain of unknown function (DUF3578) Swol_1117 PF04411 Swol_1117 Swol_1117 PF09823 Swol_1117 Swol_1118 PF00873 AcrB/AcrD/AcrF family Swol_1119 PF03459 TOBE domain Swol_1121 PF04055 Radical SAM superfamily Swol_1121 PF12544 Lysine-2,3-aminomutase Swol_1121 PF13394 4Fe-4S single cluster domain Swol_1122 PF02735 Ku70/Ku80 beta-barrel domain Swol_1123 PF01068 ATP dependent DNA ligase domain Swol_1123 PF04679 ATP dependent DNA ligase C terminal region Swol_1125 PF07690 Major Facilitator Superfamily Swol_1127 PF07454 Swol_1127 Swol_1128 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Swol_1128 PF05221 S-adenosyl-L-homocysteine hydrolase Swol_1130 PF03061 Thioesterase superfamily Swol_1131 PF11823 Swol_1131 Swol_1132 PF04851 Type III restriction enzyme, res subunit Swol_1132 PF13307 Helicase C-terminal domain Swol_1133 PF12670 Swol_1133 Swol_1134 PF12804 MobA-like NTP transferase domain Swol_1135 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Swol_1135 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Swol_1136 PF00111 2Fe-2S iron-sulfur cluster binding domain Swol_1136 PF01799 [2Fe-2S] binding domain Swol_1137 PF00941 FAD binding domain in molybdopterin dehydrogenase Swol_1137 PF03450 CO dehydrogenase flavoprotein C-terminal domain Swol_1138 PF02625 XdhC and CoxI family Swol_1138 PF13478 XdhC Rossmann domain Swol_1139 PF02535 Swol_1139 Swol_1140 PF04657 Swol_1140 Swol_1142 PF12705 PD-(D/E)XK nuclease superfamily Swol_1142 PF13361 UvrD-like helicase C-terminal domain Swol_1144 PF00501 AMP-binding enzyme Swol_1145 PF11339 Swol_1145 Swol_1146 PF00580 UvrD/REP helicase N-terminal domain Swol_1146 PF12705 PD-(D/E)XK nuclease superfamily Swol_1146 PF13361 UvrD-like helicase C-terminal domain Swol_1147 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Swol_1147 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Swol_1148 PF14084 Swol_1148 Swol_1149 PF00717 Peptidase S24-like Swol_1150 PF01975 Survival protein SurE Swol_1152 PF00009 Elongation factor Tu GTP binding domain Swol_1152 PF00679 Elongation factor G C-terminus Swol_1152 PF03144 Elongation factor Tu domain 2 Swol_1152 PF03764 Elongation factor G, domain IV Swol_1152 PF14492 Elongation Factor G, domain II Swol_1154 PF00924 Mechanosensitive ion channel Swol_1155 PF01820 D-ala D-ala ligase N-terminus Swol_1155 PF07478 D-ala D-ala ligase C-terminus Swol_1157 PF04055 Radical SAM superfamily Swol_1158 PF02621 Menaquinone biosynthesis Swol_1159 PF04055 Radical SAM superfamily Swol_1160 PF01048 Phosphorylase superfamily Swol_1161 PF03699 Swol_1161 Swol_1162 PF13472 GDSL-like Lipase/Acylhydrolase family Swol_1163 PF03054 tRNA methyl transferase Swol_1163 PF05670 Swol_1163 Swol_1164 PF04463 Swol_1164 Swol_1166 PF01609 Transposase DDE domain Swol_1166 PF05598 Swol_1166 Swol_1167 PF14398 Swol_1167 Swol_1168 PF14398 Swol_1168 Swol_1169 PF13180 PDZ domain Swol_1169 PF13365 Trypsin-like peptidase domain Swol_1170 PF00365 Phosphofructokinase Swol_1171 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Swol_1171 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Swol_1172 PF10882 Swol_1172 Swol_1173 PF01926 50S ribosome-binding GTPase Swol_1173 PF06071 Protein of unknown function (DUF933) Swol_1174 PF14398 Swol_1174 Swol_1175 PF14395 Swol_1175 Swol_1176 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family Swol_1177 PF04456 Protein of unknown function (DUF503) Swol_1178 PF00999 Sodium/hydrogen exchanger family Swol_1178 PF02080 TrkA-C domain Swol_1178 PF02254 TrkA-N domain Swol_1180 PF00501 AMP-binding enzyme Swol_1180 PF13193 AMP-binding enzyme C-terminal domain Swol_1181 PF02558 Ketopantoate reductase PanE/ApbA Swol_1181 PF08546 Ketopantoate reductase PanE/ApbA C terminal Swol_1183 PF04221 RelB antitoxin Swol_1184 PF00395 S-layer homology domain Swol_1185 PF04011 LemA family Swol_1186 PF04536 TLP18 Swol_1187 PF01497 Periplasmic binding protein Swol_1189 PF13205 Bacterial Ig-like domain Swol_1190 PF03459 TOBE domain Swol_1191 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Swol_1191 PF03466 LysR substrate binding domain Swol_1192 PF03845 Swol_1192 Swol_1193 PF05504 Spore germination B3/ GerAC like, C-terminal Swol_1194 PF03323 Swol_1194 Swol_1195 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Swol_1196 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Swol_1196 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Swol_1197 PF06866 Swol_1197 Swol_1198 PF00155 Aminotransferase class I and II Swol_1199 PF01564 Spermine/spermidine synthase Swol_1199 PF17284 Swol_1199 Swol_1201 PF00772 DnaB-like helicase N terminal domain Swol_1201 PF03796 DnaB-like helicase C terminal domain Swol_1202 PF07261 Replication initiation and membrane attachment Swol_1203 PF00753 Metallo-beta-lactamase superfamily Swol_1203 PF07521 RNA-metabolising metallo-beta-lactamase Swol_1203 PF10996 Beta-Casp domain Swol_1205 PF00155 Aminotransferase class I and II Swol_1206 PF01037 AsnC family Swol_1207 PF03109 Swol_1207 Swol_1209 PF01259 SAICAR synthetase Swol_1210 PF03372 Endonuclease/Exonuclease/phosphatase family Swol_1211 PF10609 ParA/MinD ATPase like Swol_1212 PF04542 Sigma-70 region 2 Swol_1212 PF08281 Sigma-70, region 4 Swol_1213 PF13490 Putative zinc-finger Swol_1214 PF00009 Elongation factor Tu GTP binding domain Swol_1214 PF00679 Elongation factor G C-terminus Swol_1214 PF03144 Elongation factor Tu domain 2 Swol_1214 PF03764 Elongation factor G, domain IV Swol_1214 PF14492 Elongation Factor G, domain II Swol_1215 PF00857 Isochorismatase family Swol_1216 PF13649 Methyltransferase domain Swol_1219 PF00885 6,7-dimethyl-8-ribityllumazine synthase Swol_1220 PF00925 GTP cyclohydrolase II Swol_1220 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Swol_1221 PF00677 Lumazine binding domain Swol_1222 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Swol_1222 PF01872 RibD C-terminal domain Swol_1223 PF00834 Ribulose-phosphate 3 epimerase family Swol_1224 PF03193 Protein of unknown function, DUF258 Swol_1224 PF16745 Swol_1224 Swol_1225 PF00069 Protein kinase domain Swol_1225 PF03793 PASTA domain Swol_1226 PF13672 Protein phosphatase 2C Swol_1227 PF04055 Radical SAM superfamily Swol_1227 PF13394 4Fe-4S single cluster domain Swol_1228 PF01029 NusB family Swol_1228 PF01189 NOL1/NOP2/sun family Swol_1228 PF17125 Swol_1228 Swol_1229 PF04298 Swol_1229 Swol_1230 PF01976 Swol_1230 Swol_1231 PF00551 Formyl transferase Swol_1231 PF02911 Formyl transferase, C-terminal domain Swol_1232 PF01327 Polypeptide deformylase Swol_1233 PF00270 DEAD/DEAH box helicase Swol_1233 PF00271 Helicase conserved C-terminal domain Swol_1234 PF00438 S-adenosylmethionine synthetase, N-terminal domain Swol_1234 PF02772 S-adenosylmethionine synthetase, central domain Swol_1234 PF02773 S-adenosylmethionine synthetase, C-terminal domain Swol_1235 PF02441 Flavoprotein Swol_1235 PF04127 DNA / pantothenate metabolism flavoprotein Swol_1236 PF01192 RNA polymerase Rpb6 Swol_1237 PF00625 Guanylate kinase Swol_1238 PF04025 Swol_1238 Swol_1239 PF03755 Swol_1239 Swol_1239 PF08340 Swol_1239 Swol_1240 PF00122 E1-E2 ATPase Swol_1240 PF00689 Cation transporting ATPase, C-terminus Swol_1240 PF00690 Cation transporter/ATPase, N-terminus Swol_1240 PF00702 haloacid dehalogenase-like hydrolase Swol_1241 PF00561 alpha/beta hydrolase fold Swol_1242 PF01575 MaoC like domain Swol_1244 PF09602 Swol_1244 Swol_1247 PF00877 NlpC/P60 family Swol_1247 PF01476 LysM domain Swol_1248 PF02811 PHP domain Swol_1249 PF01244 Membrane dipeptidase (Peptidase family M19) Swol_1250 PF04232 Stage V sporulation protein S (SpoVS) Swol_1251 PF13277 YmdB-like protein Swol_1253 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Swol_1253 PF08388 Swol_1253 Swol_1254 PF00013 KH domain Swol_1254 PF01966 HD domain Swol_1254 PF12072 Swol_1254 Swol_1255 PF00154 recA bacterial DNA recombination protein Swol_1256 PF02834 LigT like Phosphoesterase Swol_1257 PF00994 Probable molybdopterin binding domain Swol_1257 PF02464 Competence-damaged protein Swol_1258 PF00004 ATPase family associated with various cellular activities (AAA) Swol_1258 PF01434 Peptidase family M41 Swol_1260 PF00395 S-layer homology domain Swol_1261 PF01066 CDP-alcohol phosphatidyltransferase Swol_1262 PF00919 Uncharacterized protein family UPF0004 Swol_1262 PF04055 Radical SAM superfamily Swol_1263 PF13413 Helix-turn-helix domain Swol_1263 PF13464 Swol_1263 Swol_1264 PF00294 pfkB family carbohydrate kinase Swol_1264 PF13412 Winged helix-turn-helix DNA-binding Swol_1265 PF01580 FtsK/SpoIIIE family Swol_1265 PF09397 Ftsk gamma domain Swol_1265 PF13491 Swol_1265 Swol_1266 PF02673 Swol_1266 Swol_1267 PF00574 Clp protease Swol_1268 PF00753 Metallo-beta-lactamase superfamily Swol_1268 PF07521 RNA-metabolising metallo-beta-lactamase Swol_1269 PF00701 Dihydrodipicolinate synthetase family Swol_1270 PF01118 Semialdehyde dehydrogenase, NAD binding domain Swol_1270 PF02774 Semialdehyde dehydrogenase, dimerisation domain Swol_1271 PF02441 Flavoprotein Swol_1272 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Swol_1272 PF16924 Swol_1272 Swol_1273 PF01113 Dihydrodipicolinate reductase, N-terminus Swol_1273 PF05173 Dihydrodipicolinate reductase, C-terminus Swol_1275 PF05670 Swol_1275 Swol_1275 PF05833 Fibronectin-binding protein A N-terminus (FbpA) Swol_1277 PF00156 Phosphoribosyl transferase domain Swol_1278 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Swol_1279 PF01180 Dihydroorotate dehydrogenase Swol_1280 PF00175 Oxidoreductase NAD-binding domain Swol_1280 PF00970 Oxidoreductase FAD-binding domain Swol_1280 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Swol_1281 PF02142 MGS-like domain Swol_1281 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Swol_1281 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Swol_1282 PF00117 Glutamine amidotransferase class-I Swol_1282 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Swol_1283 PF01979 Amidohydrolase family Swol_1284 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Swol_1284 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Swol_1285 PF00156 Phosphoribosyl transferase domain Swol_1286 PF00849 RNA pseudouridylate synthase Swol_1286 PF01479 S4 domain Swol_1287 PF01252 Swol_1287 Swol_1288 PF00665 Integrase core domain Swol_1289 PF01695 IstB-like ATP binding protein Swol_1290 PF04647 Swol_1290 Swol_1292 PF00753 Metallo-beta-lactamase superfamily Swol_1293 PF12697 Alpha/beta hydrolase family Swol_1294 PF08369 Proto-chlorophyllide reductase 57 kD subunit Swol_1294 PF08821 Swol_1294 Swol_1295 PF02082 Transcriptional regulator Swol_1297 PF01934 Protein of unknown function DUF86 Swol_1298 PF01909 Nucleotidyltransferase domain Swol_1299 PF00589 Phage integrase family Swol_1300 PF07992 Pyridine nucleotide-disulphide oxidoreductase Swol_1301 PF01676 Metalloenzyme superfamily Swol_1301 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Swol_1302 PF00291 Pyridoxal-phosphate dependent enzyme Swol_1302 PF14821 Threonine synthase N terminus Swol_1303 PF10881 Swol_1303 Swol_1304 PF02368 Bacterial Ig-like domain (group 2) Swol_1309 PF05133 Phage portal protein, SPP1 Gp6-like Swol_1310 PF17289 Swol_1310 Swol_1314 PF17236 Swol_1314 Swol_1316 PF00589 Phage integrase family Swol_1316 PF13495 Phage integrase, N-terminal SAM-like domain Swol_1317 PF00696 Amino acid kinase family Swol_1317 PF01842 ACT domain Swol_1317 PF13840 ACT domain Swol_1318 PF00288 GHMP kinases N terminal domain Swol_1318 PF08544 GHMP kinases C terminal Swol_1319 PF00742 Homoserine dehydrogenase Swol_1319 PF01842 ACT domain Swol_1319 PF03447 Homoserine dehydrogenase, NAD binding domain Swol_1320 PF00989 PAS fold Swol_1320 PF01966 HD domain Swol_1321 PF00989 PAS fold Swol_1321 PF01590 GAF domain Swol_1321 PF08448 PAS fold Swol_1321 PF13487 HD domain Swol_1322 PF09547 Swol_1322 Swol_1323 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Swol_1323 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Swol_1324 PF02660 Swol_1324 Swol_1325 PF01926 50S ribosome-binding GTPase Swol_1325 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Swol_1326 PF04459 Swol_1326 Swol_1327 PF00072 Response regulator receiver domain Swol_1328 PF00072 Response regulator receiver domain Swol_1328 PF00512 His Kinase A (phospho-acceptor) domain Swol_1328 PF00989 PAS fold Swol_1328 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_1328 PF13426 PAS domain Swol_1329 PF00072 Response regulator receiver domain Swol_1329 PF01339 CheB methylesterase Swol_1330 PF01739 CheR methyltransferase, SAM binding domain Swol_1330 PF03705 CheR methyltransferase, all-alpha domain Swol_1331 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Swol_1332 PF01627 Hpt domain Swol_1332 PF02895 Signal transducing histidine kinase, homodimeric domain Swol_1332 PF07194 P2 response regulator binding domain Swol_1333 PF00072 Response regulator receiver domain Swol_1334 PF00440 Bacterial regulatory proteins, tetR family Swol_1334 PF08359 YsiA-like protein, C-terminal region Swol_1335 PF11385 Swol_1335 Swol_1336 PF11385 Swol_1336 Swol_1338 PF14045 Swol_1338 Swol_1339 PF07454 Swol_1339 Swol_1340 PF07758 Swol_1340 Swol_1341 PF01070 FMN-dependent dehydrogenase Swol_1343 PF01609 Transposase DDE domain Swol_1343 PF05598 Swol_1343 Swol_1344 PF00575 S1 RNA binding domain Swol_1344 PF02401 LytB protein Swol_1345 PF01553 Acyltransferase Swol_1346 PF02224 Cytidylate kinase Swol_1347 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Swol_1348 PF00793 DAHP synthetase I family Swol_1349 PF01842 ACT domain Swol_1349 PF02153 Prephenate dehydrogenase Swol_1350 PF02875 Mur ligase family, glutamate ligase domain Swol_1350 PF08245 Mur ligase middle domain Swol_1350 PF08443 RimK-like ATP-grasp domain Swol_1351 PF03575 Peptidase family S51 Swol_1352 PF01979 Amidohydrolase family Swol_1353 PF00355 Rieske [2Fe-2S] domain Swol_1353 PF01266 FAD dependent oxidoreductase Swol_1354 PF07690 Major Facilitator Superfamily Swol_1355 PF01575 MaoC like domain Swol_1356 PF01575 MaoC like domain Swol_1357 PF01276 Orn/Lys/Arg decarboxylase, major domain Swol_1357 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Swol_1358 PF04294 Swol_1358 Swol_1359 PF00892 EamA-like transporter family Swol_1361 PF05559 Swol_1361 Swol_1362 PF00817 impB/mucB/samB family Swol_1362 PF11798 IMS family HHH motif Swol_1362 PF11799 impB/mucB/samB family C-terminal domain Swol_1363 PF08279 HTH domain Swol_1363 PF13280 Swol_1363 Swol_1364 PF06445 GyrI-like small molecule binding domain Swol_1366 PF13489 Methyltransferase domain Swol_1367 PF00005 ABC transporter Swol_1369 PF01022 Bacterial regulatory protein, arsR family Swol_1370 PF11369 Swol_1370 Swol_1372 PF12910 Antitoxin of toxin-antitoxin stability system N-terminal Swol_1374 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Swol_1375 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Swol_1375 PF17147 Swol_1375 Swol_1376 PF14697 4Fe-4S dicluster domain Swol_1377 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Swol_1378 PF01436 NHL repeat Swol_1378 PF03442 Carbohydrate binding domain X2 Swol_1378 PF05345 Putative Ig domain Swol_1379 PF12799 Leucine Rich repeats (2 copies) Swol_1379 PF13306 Leucine rich repeats (6 copies) Swol_1380 PF13687 Swol_1380 Swol_1381 PF00793 DAHP synthetase I family Swol_1382 PF00392 Bacterial regulatory proteins, gntR family Swol_1383 PF00005 ABC transporter Swol_1384 PF13346 Swol_1384 Swol_1387 PF00583 Acetyltransferase (GNAT) family Swol_1388 PF00793 DAHP synthetase I family Swol_1390 PF00392 Bacterial regulatory proteins, gntR family Swol_1391 PF07853 Swol_1391 Swol_1392 PF13026 Protein of unknown function (DUF3887) Swol_1393 PF00795 Carbon-nitrogen hydrolase Swol_1394 PF01894 Uncharacterised protein family UPF0047 Swol_1395 PF07736 Chorismate mutase type I Swol_1396 PF09021 HutP Swol_1398 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Swol_1399 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Swol_1400 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Swol_1400 PF17147 Swol_1400 Swol_1401 PF12838 4Fe-4S dicluster domain Swol_1403 PF08668 HDOD domain Swol_1405 PF02277 Phosphoribosyltransferase Swol_1406 PF00849 RNA pseudouridylate synthase Swol_1406 PF01479 S4 domain Swol_1408 PF01227 GTP cyclohydrolase I Swol_1409 PF01268 Formate--tetrahydrofolate ligase Swol_1410 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Swol_1411 PF05016 Plasmid stabilisation system protein Swol_1412 PF07670 Nucleoside recognition Swol_1413 PF07670 Nucleoside recognition Swol_1414 PF09579 Swol_1414 Swol_1415 PF11167 Swol_1415 Swol_1416 PF09350 Swol_1416 Swol_1417 PF04079 Putative transcriptional regulators (Ypuh-like) Swol_1418 PF02616 ScpA/B protein Swol_1419 PF02163 Peptidase family M50 Swol_1420 PF00571 CBS domain Swol_1420 PF01368 DHH family Swol_1420 PF01743 Poly A polymerase head domain Swol_1420 PF12627 Probable RNA and SrmB- binding site of polymerase A Swol_1421 PF11136 Swol_1421 Swol_1422 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Swol_1422 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Swol_1423 PF06305 Swol_1423 Swol_1424 PF02355 Protein export membrane protein Swol_1424 PF07549 SecD/SecF GG Motif Swol_1425 PF02355 Protein export membrane protein Swol_1425 PF07549 SecD/SecF GG Motif Swol_1426 PF01966 HD domain Swol_1427 PF02699 Preprotein translocase subunit Swol_1428 PF01702 Queuine tRNA-ribosyltransferase Swol_1429 PF02547 Queuosine biosynthesis protein Swol_1430 PF02677 Swol_1430 Swol_1431 PF05491 Holliday junction DNA helicase ruvB C-terminus Swol_1431 PF05496 Holliday junction DNA helicase ruvB N-terminus Swol_1432 PF01330 RuvA N terminal domain Swol_1432 PF07499 RuvA, C-terminal domain Swol_1432 PF14520 Helix-hairpin-helix domain Swol_1433 PF02075 Crossover junction endodeoxyribonuclease RuvC Swol_1435 PF01709 Transcriptional regulator Swol_1436 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family Swol_1437 PF02540 NAD synthase Swol_1438 PF00291 Pyridoxal-phosphate dependent enzyme Swol_1440 PF00037 4Fe-4S binding domain Swol_1440 PF09383 NIL domain Swol_1441 PF01837 Swol_1441 Swol_1442 PF00809 Pterin binding enzyme Swol_1442 PF02310 B12 binding domain Swol_1442 PF02574 Homocysteine S-methyltransferase Swol_1442 PF02607 B12 binding domain Swol_1443 PF02416 mttA/Hcf106 family Swol_1444 PF04020 Swol_1444 Swol_1445 PF01078 Magnesium chelatase, subunit ChlI Swol_1445 PF13335 Swol_1445 Swol_1445 PF13541 Subunit ChlI of Mg-chelatase Swol_1446 PF13690 Chemotaxis phosphatase CheX Swol_1447 PF13690 Chemotaxis phosphatase CheX Swol_1448 PF00072 Response regulator receiver domain Swol_1449 PF00072 Response regulator receiver domain Swol_1449 PF01339 CheB methylesterase Swol_1450 PF01584 CheW-like domain Swol_1451 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Swol_1452 PF00012 Hsp70 protein Swol_1453 PF04212 MIT (microtubule interacting and transport) domain Swol_1454 PF13614 AAA domain Swol_1455 PF01584 CheW-like domain Swol_1455 PF01627 Hpt domain Swol_1455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_1455 PF02895 Signal transducing histidine kinase, homodimeric domain Swol_1456 PF00072 Response regulator receiver domain Swol_1457 PF01739 CheR methyltransferase, SAM binding domain Swol_1457 PF03705 CheR methyltransferase, all-alpha domain Swol_1462 PF04851 Type III restriction enzyme, res subunit Swol_1463 PF01555 DNA methylase Swol_1464 PF13443 Cro/C1-type HTH DNA-binding domain Swol_1465 PF03288 Poxvirus D5 protein-like Swol_1465 PF08706 Swol_1465 Swol_1466 PF05065 Phage capsid family Swol_1467 PF00239 Resolvase, N terminal domain Swol_1467 PF07508 Recombinase Swol_1467 PF13408 Recombinase zinc beta ribbon domain Swol_1467 PF14287 Swol_1467 Swol_1468 PF03109 Swol_1468 Swol_1469 PF00990 GGDEF domain Swol_1469 PF01590 GAF domain Swol_1469 PF08447 PAS fold Swol_1469 PF08448 PAS fold Swol_1469 PF13487 HD domain Swol_1472 PF00005 ABC transporter Swol_1473 PF01032 FecCD transport family Swol_1474 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Swol_1474 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Swol_1475 PF02021 Uncharacterised protein family UPF0102 Swol_1476 PF01312 FlhB HrpN YscU SpaS Family Swol_1478 PF01351 Ribonuclease HII Swol_1479 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Swol_1479 PF07992 Pyridine nucleotide-disulphide oxidoreductase Swol_1480 PF00753 Metallo-beta-lactamase superfamily Swol_1481 PF01144 Coenzyme A transferase Swol_1483 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Swol_1483 PF02770 Acyl-CoA dehydrogenase, middle domain Swol_1483 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Swol_1484 PF00378 Enoyl-CoA hydratase/isomerase family Swol_1485 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Swol_1485 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Swol_1486 PF00108 Thiolase, N-terminal domain Swol_1486 PF02803 Thiolase, C-terminal domain Swol_1487 PF00158 Sigma-54 interaction domain Swol_1487 PF00571 CBS domain Swol_1487 PF00989 PAS fold Swol_1487 PF13426 PAS domain Swol_1489 PF09587 Bacterial capsule synthesis protein PGA_cap Swol_1490 PF01926 50S ribosome-binding GTPase Swol_1491 PF01245 Ribosomal protein L19 Swol_1492 PF09936 SAM-dependent RNA methyltransferase Swol_1493 PF01746 tRNA (Guanine-1)-methyltransferase Swol_1494 PF01782 RimM N-terminal domain Swol_1494 PF05239 PRC-barrel domain Swol_1496 PF13083 KH domain Swol_1497 PF00886 Ribosomal protein S16 Swol_1498 PF00448 SRP54-type protein, GTPase domain Swol_1498 PF02881 SRP54-type protein, helical bundle domain Swol_1498 PF02978 Signal peptide binding domain Swol_1499 PF04297 Putative helix-turn-helix protein, YlxM / p13 like Swol_1500 PF02645 Uncharacterised protein, DegV family COG1307 Swol_1502 PF01966 HD domain Swol_1504 PF13487 HD domain Swol_1505 PF02639 Swol_1505 Swol_1506 PF03698 Swol_1506 Swol_1507 PF00140 Sigma-70 factor, region 1 Swol_1507 PF03979 Sigma-70 factor, region 1 Swol_1507 PF04539 Sigma-70 region 3 Swol_1507 PF04542 Sigma-70 region 2 Swol_1507 PF04545 Sigma-70, region 4 Swol_1508 PF01807 CHC2 zinc finger Swol_1508 PF08275 DNA primase catalytic core, N-terminal domain Swol_1508 PF10410 DnaB-helicase binding domain of primase Swol_1508 PF13155 Toprim-like Swol_1509 PF01966 HD domain Swol_1509 PF13286 Phosphohydrolase-associated domain Swol_1510 PF03358 NADPH-dependent FMN reductase Swol_1511 PF03961 Swol_1511 Swol_1512 PF00391 PEP-utilising enzyme, mobile domain Swol_1512 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Swol_1512 PF02896 PEP-utilising enzyme, TIM barrel domain Swol_1513 PF03618 Swol_1513 Swol_1514 PF00571 CBS domain Swol_1514 PF08279 HTH domain Swol_1515 PF02092 Swol_1515 Swol_1515 PF05746 DALR anticodon binding domain Swol_1516 PF02091 Glycyl-tRNA synthetase alpha subunit Swol_1518 PF01471 Putative peptidoglycan binding domain Swol_1519 PF01578 Swol_1519 Swol_1520 PF05140 Swol_1520 Swol_1521 PF02335 Cytochrome c552 Swol_1522 PF03264 NapC/NirT cytochrome c family, N-terminal region Swol_1523 PF00881 Nitroreductase family Swol_1525 PF09335 Swol_1525 Swol_1527 PF03706 Swol_1527 Swol_1528 PF05685 Putative restriction endonuclease Swol_1529 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Swol_1529 PF14697 4Fe-4S dicluster domain Swol_1530 PF00037 4Fe-4S binding domain Swol_1530 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Swol_1531 PF02579 Dinitrogenase iron-molybdenum cofactor Swol_1532 PF02579 Dinitrogenase iron-molybdenum cofactor Swol_1533 PF03232 Swol_1533 Swol_1534 PF00753 Metallo-beta-lactamase superfamily Swol_1535 PF01325 Iron dependent repressor, N-terminal DNA binding domain Swol_1535 PF02742 Iron dependent repressor, metal binding and dimerisation domain Swol_1536 PF04016 Domain of unknown function (DUF364) Swol_1537 PF04023 FeoA domain Swol_1538 PF02421 Ferrous iron transport protein B Swol_1539 PF07664 Swol_1539 Swol_1539 PF07670 Nucleoside recognition Swol_1541 PF15919 Swol_1541 Swol_1542 PF01381 Helix-turn-helix Swol_1543 PF01381 Helix-turn-helix Swol_1543 PF06114 Domain of unknown function (DUF955) Swol_1545 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Swol_1546 PF13175 AAA ATPase domain Swol_1547 PF04851 Type III restriction enzyme, res subunit Swol_1548 PF01555 DNA methylase Swol_1549 PF14335 Swol_1549 Swol_1550 PF00176 SNF2 family N-terminal domain Swol_1550 PF00271 Helicase conserved C-terminal domain Swol_1550 PF13091 PLD-like domain Swol_1551 PF09720 Swol_1551 Swol_1553 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Swol_1554 PF00005 ABC transporter Swol_1555 PF00528 Binding-protein-dependent transport system inner membrane component Swol_1556 PF13531 Bacterial extracellular solute-binding protein Swol_1557 PF12727 PBP superfamily domain Swol_1557 PF12728 Helix-turn-helix domain Swol_1558 PF02565 Recombination protein O C terminal Swol_1558 PF11967 Recombination protein O N terminal Swol_1560 PF01791 DeoC/LacD family aldolase Swol_1561 PF01926 50S ribosome-binding GTPase Swol_1561 PF07650 KH domain Swol_1562 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Swol_1563 PF01219 Prokaryotic diacylglycerol kinase Swol_1564 PF02130 Uncharacterized protein family UPF0054 Swol_1565 PF01966 HD domain Swol_1565 PF07697 Swol_1565 Swol_1565 PF07698 Swol_1565 Swol_1566 PF02562 PhoH-like protein Swol_1567 PF06898 Swol_1567 Swol_1568 PF07873 YabP family Swol_1569 PF15919 Swol_1569 Swol_1570 PF01850 PIN domain Swol_1572 PF01230 HIT domain Swol_1573 PF01165 Ribosomal protein S21 Swol_1574 PF00919 Uncharacterized protein family UPF0004 Swol_1574 PF04055 Radical SAM superfamily Swol_1575 PF04452 RNA methyltransferase Swol_1576 PF06325 Ribosomal protein L11 methyltransferase (PrmA) Swol_1577 PF00226 DnaJ domain Swol_1577 PF00684 DnaJ central domain Swol_1577 PF01556 DnaJ C terminal domain Swol_1578 PF00012 Hsp70 protein Swol_1579 PF01025 GrpE Swol_1581 PF01628 HrcA protein C terminal domain Swol_1582 PF04055 Radical SAM superfamily Swol_1582 PF06969 HemN C-terminal domain Swol_1583 PF00009 Elongation factor Tu GTP binding domain Swol_1583 PF00679 Elongation factor G C-terminus Swol_1583 PF03144 Elongation factor Tu domain 2 Swol_1583 PF06421 GTP-binding protein LepA C-terminus Swol_1584 PF03023 Swol_1584 Swol_1586 PF07454 Swol_1586 Swol_1587 PF01649 Ribosomal protein S20 Swol_1588 PF06144 DNA polymerase III, delta subunit Swol_1589 PF03061 Thioesterase superfamily Swol_1590 PF00999 Sodium/hydrogen exchanger family Swol_1590 PF02080 TrkA-C domain Swol_1591 PF01979 Amidohydrolase family Swol_1592 PF05598 Swol_1592 Swol_1592 PF13751 Swol_1592 Swol_1593 PF01979 Amidohydrolase family Swol_1594 PF00395 S-layer homology domain Swol_1594 PF02872 5'-nucleotidase, C-terminal domain Swol_1594 PF09587 Bacterial capsule synthesis protein PGA_cap Swol_1595 PF00753 Metallo-beta-lactamase superfamily Swol_1595 PF03772 Swol_1595 Swol_1595 PF13567 Swol_1595 Swol_1596 PF10531 SLBB domain Swol_1596 PF12836 Helix-hairpin-helix motif Swol_1598 PF00027 Cyclic nucleotide-binding domain Swol_1598 PF09986 Swol_1598 Swol_1599 PF00133 tRNA synthetases class I (I, L, M and V) Swol_1599 PF08264 Anticodon-binding domain of tRNA Swol_1599 PF09334 tRNA synthetases class I (M) Swol_1599 PF13603 Leucyl-tRNA synthetase, Domain 2 Swol_1600 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Swol_1601 PF02410 Oligomerisation domain Swol_1602 PF01966 HD domain Swol_1603 PF01467 Cytidylyltransferase Swol_1605 PF00291 Pyridoxal-phosphate dependent enzyme Swol_1606 PF09335 Swol_1606 Swol_1607 PF00171 Aldehyde dehydrogenase family Swol_1608 PF00696 Amino acid kinase family Swol_1608 PF01472 PUA domain Swol_1609 PF01018 GTP1/OBG Swol_1609 PF01926 50S ribosome-binding GTPase Swol_1609 PF09269 Domain of unknown function (DUF1967) Swol_1610 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain Swol_1611 PF01016 Ribosomal L27 protein Swol_1612 PF04327 Protein of unknown function (DUF464) Swol_1613 PF00829 Ribosomal prokaryotic L21 protein Swol_1614 PF10150 Ribonuclease E/G family Swol_1615 PF10105 Swol_1615 Swol_1616 PF04055 Radical SAM superfamily Swol_1617 PF02163 Peptidase family M50 Swol_1618 PF01551 Peptidase family M23 Swol_1620 PF00005 ABC transporter Swol_1621 PF00392 Bacterial regulatory proteins, gntR family Swol_1622 PF00990 GGDEF domain Swol_1622 PF07695 Swol_1622 Swol_1623 PF11738 Protein of unknown function (DUF3298) Swol_1623 PF13739 Domain of unknown function (DUF4163) Swol_1625 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Swol_1625 PF05685 Putative restriction endonuclease Swol_1626 PF00465 Iron-containing alcohol dehydrogenase Swol_1628 PF05683 Fumarase C-terminus Swol_1629 PF05681 Swol_1629 Swol_1630 PF08239 Bacterial SH3 domain Swol_1630 PF12849 PBP superfamily domain Swol_1631 PF00005 ABC transporter Swol_1632 PF00528 Binding-protein-dependent transport system inner membrane component Swol_1633 PF06803 Swol_1633 Swol_1634 PF01098 Swol_1634 Swol_1635 PF03776 Septum formation topological specificity factor MinE Swol_1636 PF13614 AAA domain Swol_1637 PF03775 Septum formation inhibitor MinC, C-terminal domain Swol_1638 PF00905 Penicillin binding protein transpeptidase domain Swol_1638 PF03717 Penicillin-binding Protein dimerisation domain Swol_1639 PF04093 Swol_1639 Swol_1640 PF04085 rod shape-determining protein MreC Swol_1641 PF06723 MreB/Mbl protein Swol_1642 PF04002 RadC-like JAB domain Swol_1643 PF02545 Maf-like protein Swol_1644 PF14209 Swol_1644 Swol_1645 PF02629 CoA binding domain Swol_1645 PF06971 Putative DNA-binding protein N-terminus Swol_1646 PF01384 Swol_1646 Swol_1647 PF01865 Protein of unknown function DUF47 Swol_1648 PF02875 Mur ligase family, glutamate ligase domain Swol_1648 PF08245 Mur ligase middle domain Swol_1649 PF00133 tRNA synthetases class I (I, L, M and V) Swol_1649 PF08264 Anticodon-binding domain of tRNA Swol_1649 PF10458 Valyl tRNA synthetase tRNA binding arm Swol_1651 PF02810 SEC-C motif Swol_1651 PF09722 Swol_1651 Swol_1652 PF01926 50S ribosome-binding GTPase Swol_1653 PF00004 ATPase family associated with various cellular activities (AAA) Swol_1653 PF02190 ATP-dependent protease La (LON) domain Swol_1653 PF05362 Lon protease (S16) C-terminal proteolytic domain Swol_1654 PF00004 ATPase family associated with various cellular activities (AAA) Swol_1654 PF05362 Lon protease (S16) C-terminal proteolytic domain Swol_1655 PF06689 ClpX C4-type zinc finger Swol_1655 PF07724 AAA domain (Cdc48 subfamily) Swol_1655 PF10431 C-terminal, D2-small domain, of ClpB protein Swol_1656 PF00574 Clp protease Swol_1657 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Swol_1657 PF05697 Bacterial trigger factor protein (TF) Swol_1657 PF05698 Bacterial trigger factor protein (TF) C-terminus Swol_1658 PF01471 Putative peptidoglycan binding domain Swol_1659 PF01145 SPFH domain / Band 7 family Swol_1660 PF15919 Swol_1660 Swol_1661 PF07927 YcfA-like protein Swol_1662 PF13174 Tetratricopeptide repeat Swol_1663 PF01471 Putative peptidoglycan binding domain Swol_1663 PF03734 L,D-transpeptidase catalytic domain Swol_1664 PF01258 Prokaryotic dksA/traR C4-type zinc finger Swol_1664 PF02663 FmdE, Molybdenum formylmethanofuran dehydrogenase operon Swol_1665 PF04016 Domain of unknown function (DUF364) Swol_1665 PF13938 Domain of unknown function (DUF4213) Swol_1667 PF12146 Putative lysophospholipase Swol_1670 PF00817 impB/mucB/samB family Swol_1670 PF11799 impB/mucB/samB family C-terminal domain Swol_1671 PF01741 Large-conductance mechanosensitive channel, MscL Swol_1672 PF13649 Methyltransferase domain Swol_1673 PF01497 Periplasmic binding protein Swol_1674 PF04055 Radical SAM superfamily Swol_1675 PF01497 Periplasmic binding protein Swol_1676 PF01032 FecCD transport family Swol_1677 PF04055 Radical SAM superfamily Swol_1679 PF01497 Periplasmic binding protein Swol_1680 PF00512 His Kinase A (phospho-acceptor) domain Swol_1680 PF00672 HAMP domain Swol_1680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_1681 PF00072 Response regulator receiver domain Swol_1681 PF00486 Transcriptional regulatory protein, C terminal Swol_1683 PF00005 ABC transporter Swol_1684 PF02492 CobW/HypB/UreG, nucleotide-binding domain Swol_1685 PF13343 Bacterial extracellular solute-binding protein Swol_1686 PF08241 Methyltransferase domain Swol_1687 PF01497 Periplasmic binding protein Swol_1688 PF08241 Methyltransferase domain Swol_1689 PF04055 Radical SAM superfamily Swol_1690 PF01497 Periplasmic binding protein Swol_1691 PF01497 Periplasmic binding protein Swol_1692 PF04016 Domain of unknown function (DUF364) Swol_1692 PF13938 Domain of unknown function (DUF4213) Swol_1693 PF00994 Probable molybdopterin binding domain Swol_1693 PF03453 MoeA N-terminal region (domain I and II) Swol_1694 PF00005 ABC transporter Swol_1695 PF01032 FecCD transport family Swol_1696 PF09992 Predicted periplasmic protein (DUF2233) Swol_1697 PF00403 Heavy-metal-associated domain Swol_1698 PF00122 E1-E2 ATPase Swol_1698 PF00403 Heavy-metal-associated domain Swol_1698 PF00702 haloacid dehalogenase-like hydrolase Swol_1699 PF00158 Sigma-54 interaction domain Swol_1699 PF01590 GAF domain Swol_1699 PF02954 Bacterial regulatory protein, Fis family Swol_1699 PF13426 PAS domain Swol_1700 PF13510 2Fe-2S iron-sulfur cluster binding domain Swol_1700 PF14697 4Fe-4S dicluster domain Swol_1701 PF00037 4Fe-4S binding domain Swol_1701 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin Swol_1701 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Swol_1701 PF10531 SLBB domain Swol_1701 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Swol_1702 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin Swol_1703 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Swol_1703 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Swol_1704 PF12837 4Fe-4S binding domain Swol_1704 PF13247 4Fe-4S dicluster domain Swol_1705 PF13751 Swol_1705 Swol_1706 PF00899 ThiF family Swol_1707 PF02597 ThiS family Swol_1708 PF11213 Protein of unknown function (DUF3006) Swol_1709 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Swol_1709 PF08388 Swol_1709 Swol_1710 PF00753 Metallo-beta-lactamase superfamily Swol_1710 PF02805 Metal binding domain of Ada Swol_1711 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Swol_1711 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Swol_1712 PF02706 Chain length determinant protein Swol_1712 PF13807 Swol_1712 Swol_1713 PF16576 Swol_1713 Swol_1714 PF02687 Swol_1714 Swol_1714 PF12704 MacB-like periplasmic core domain Swol_1715 PF00005 ABC transporter Swol_1716 PF00092 von Willebrand factor type A domain Swol_1716 PF07090 Protein of unknown function (DUF1355) Swol_1716 PF13519 von Willebrand factor type A domain Swol_1717 PF07584 Swol_1717 Swol_1717 PF13519 von Willebrand factor type A domain Swol_1718 PF01882 Swol_1718 Swol_1719 PF07726 ATPase family associated with various cellular activities (AAA) Swol_1722 PF12679 Swol_1722 Swol_1723 PF00005 ABC transporter Swol_1723 PF13732 Swol_1723 Swol_1726 PF10057 Swol_1726 Swol_1727 PF00107 Zinc-binding dehydrogenase Swol_1727 PF08240 Alcohol dehydrogenase GroES-like domain Swol_1728 PF01909 Nucleotidyltransferase domain Swol_1729 PF01934 Protein of unknown function DUF86 Swol_1730 PF13476 AAA domain Swol_1730 PF13558 Putative exonuclease SbcCD, C subunit Swol_1731 PF00149 Calcineurin-like phosphoesterase Swol_1731 PF12320 Type 5 capsule protein repressor C-terminal domain Swol_1732 PF01471 Putative peptidoglycan binding domain Swol_1732 PF03572 Peptidase family S41 Swol_1732 PF13180 PDZ domain Swol_1733 PF00557 Metallopeptidase family M24 Swol_1734 PF14371 Swol_1734 Swol_1735 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Swol_1735 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Swol_1736 PF00528 Binding-protein-dependent transport system inner membrane component Swol_1737 PF00005 ABC transporter Swol_1738 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Swol_1739 PF00528 Binding-protein-dependent transport system inner membrane component Swol_1740 PF00005 ABC transporter Swol_1742 PF00395 S-layer homology domain Swol_1743 PF13360 PQQ-like domain Swol_1744 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Swol_1744 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Swol_1745 PF01609 Transposase DDE domain Swol_1746 PF09659 Swol_1746 Swol_1747 PF01609 Transposase DDE domain Swol_1747 PF05598 Swol_1747 Swol_1748 PF09827 CRISPR associated protein Cas2 Swol_1749 PF01867 CRISPR associated protein Cas1 Swol_1750 PF01548 Swol_1750 Swol_1750 PF02371 Swol_1750 Swol_1751 PF10040 Uncharacterized conserved protein (DUF2276) Swol_1752 PF03787 RAMP superfamily Swol_1754 PF03787 RAMP superfamily Swol_1755 PF03750 Swol_1755 Swol_1756 PF01966 HD domain Swol_1757 PF05598 Swol_1757 Swol_1757 PF13751 Swol_1757 Swol_1758 PF04239 Protein of unknown function (DUF421) Swol_1760 PF00753 Metallo-beta-lactamase superfamily Swol_1761 PF09826 Swol_1761 Swol_1762 PF11738 Protein of unknown function (DUF3298) Swol_1762 PF13739 Domain of unknown function (DUF4163) Swol_1763 PF00571 CBS domain Swol_1763 PF01595 Swol_1763 Swol_1763 PF03471 Transporter associated domain Swol_1764 PF01502 Phosphoribosyl-AMP cyclohydrolase Swol_1764 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Swol_1765 PF00977 Histidine biosynthesis protein Swol_1766 PF00977 Histidine biosynthesis protein Swol_1767 PF00475 Imidazoleglycerol-phosphate dehydratase Swol_1768 PF00815 Histidinol dehydrogenase Swol_1769 PF01634 ATP phosphoribosyltransferase Swol_1770 PF13393 Histidyl-tRNA synthetase Swol_1771 PF01371 Trp repressor protein Swol_1772 PF01966 HD domain Swol_1774 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Swol_1774 PF02843 Phosphoribosylglycinamide synthetase, C domain Swol_1774 PF02844 Phosphoribosylglycinamide synthetase, N domain Swol_1775 PF01808 AICARFT/IMPCHase bienzyme Swol_1775 PF02142 MGS-like domain Swol_1776 PF00551 Formyl transferase Swol_1777 PF00586 AIR synthase related protein, N-terminal domain Swol_1777 PF02769 AIR synthase related protein, C-terminal domain Swol_1778 PF00156 Phosphoribosyl transferase domain Swol_1778 PF13537 Glutamine amidotransferase domain Swol_1779 PF00206 Lyase Swol_1779 PF10397 Adenylosuccinate lyase C-terminus Swol_1780 PF00731 AIR carboxylase Swol_1781 PF01674 Lipase (class 2) Swol_1783 PF02915 Rubrerythrin Swol_1784 PF00117 Glutamine amidotransferase class-I Swol_1784 PF00958 GMP synthase C terminal domain Swol_1784 PF02540 NAD synthase Swol_1785 PF00156 Phosphoribosyl transferase domain Swol_1787 PF00120 Glutamine synthetase, catalytic domain Swol_1787 PF03951 Glutamine synthetase, beta-Grasp domain Swol_1788 PF02624 YcaO-like family Swol_1789 PF00881 Nitroreductase family Swol_1791 PF04542 Sigma-70 region 2 Swol_1791 PF08281 Sigma-70, region 4 Swol_1792 PF02979 Nitrile hydratase, alpha chain Swol_1793 PF07228 Stage II sporulation protein E (SpoIIE) Swol_1793 PF07694 5TMR of 5TMR-LYT Swol_1794 PF13581 Histidine kinase-like ATPase domain Swol_1795 PF01740 STAS domain Swol_1796 PF01636 Phosphotransferase enzyme family Swol_1796 PF01740 STAS domain Swol_1798 PF00395 S-layer homology domain Swol_1799 PF12627 Probable RNA and SrmB- binding site of polymerase A Swol_1799 PF13735 tRNA nucleotidyltransferase domain 2 putative Swol_1800 PF06541 Swol_1800 Swol_1802 PF09827 CRISPR associated protein Cas2 Swol_1803 PF01867 CRISPR associated protein Cas1 Swol_1804 PF01930 Domain of unknown function DUF83 Swol_1805 PF00270 DEAD/DEAH box helicase Swol_1805 PF00271 Helicase conserved C-terminal domain Swol_1806 PF09704 CRISPR-associated protein (Cas_Cas5) Swol_1807 PF05107 Swol_1807 Swol_1809 PF01881 CRISPR associated protein Cas6 Swol_1811 PF00155 Aminotransferase class I and II Swol_1813 PF01743 Poly A polymerase head domain Swol_1813 PF12627 Probable RNA and SrmB- binding site of polymerase A Swol_1813 PF13735 tRNA nucleotidyltransferase domain 2 putative Swol_1814 PF13478 XdhC Rossmann domain Swol_1815 PF13478 XdhC Rossmann domain Swol_1816 PF12804 MobA-like NTP transferase domain Swol_1817 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Swol_1817 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Swol_1818 PF00111 2Fe-2S iron-sulfur cluster binding domain Swol_1818 PF01799 [2Fe-2S] binding domain Swol_1819 PF00941 FAD binding domain in molybdopterin dehydrogenase Swol_1819 PF03450 CO dehydrogenase flavoprotein C-terminal domain Swol_1820 PF01554 MatE Swol_1821 PF12727 PBP superfamily domain Swol_1821 PF12728 Helix-turn-helix domain Swol_1822 PF04216 Protein involved in formate dehydrogenase formation Swol_1823 PF01292 Prokaryotic cytochrome b561 Swol_1824 PF13247 4Fe-4S dicluster domain Swol_1825 PF00384 Molybdopterin oxidoreductase Swol_1825 PF01568 Molydopterin dinucleotide binding domain Swol_1826 PF00384 Molybdopterin oxidoreductase Swol_1826 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Swol_1827 PF00994 Probable molybdopterin binding domain Swol_1827 PF03453 MoeA N-terminal region (domain I and II) Swol_1828 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Swol_1828 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Swol_1829 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin Swol_1830 PF00384 Molybdopterin oxidoreductase Swol_1830 PF01568 Molydopterin dinucleotide binding domain Swol_1831 PF00384 Molybdopterin oxidoreductase Swol_1831 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Swol_1831 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Swol_1831 PF12838 4Fe-4S dicluster domain Swol_1831 PF13510 2Fe-2S iron-sulfur cluster binding domain Swol_1832 PF00037 4Fe-4S binding domain Swol_1832 PF13247 4Fe-4S dicluster domain Swol_1833 PF07992 Pyridine nucleotide-disulphide oxidoreductase Swol_1834 PF13247 4Fe-4S dicluster domain Swol_1835 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Swol_1835 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Swol_1837 PF01850 PIN domain Swol_1839 PF00144 Beta-lactamase Swol_1840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Swol_1841 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Swol_1841 PF02770 Acyl-CoA dehydrogenase, middle domain Swol_1841 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Swol_1843 PF16107 Swol_1843 Swol_1844 PF00149 Calcineurin-like phosphoesterase Swol_1845 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Swol_1845 PF06833 Malonate decarboxylase gamma subunit (MdcE) Swol_1846 PF01039 Carboxyl transferase domain Swol_1847 PF07977 FabA-like domain Swol_1848 PF00109 Beta-ketoacyl synthase, N-terminal domain Swol_1848 PF02801 Beta-ketoacyl synthase, C-terminal domain Swol_1849 PF00550 Phosphopantetheine attachment site Swol_1850 PF13561 Enoyl-(Acyl carrier protein) reductase Swol_1851 PF00698 Acyl transferase domain Swol_1852 PF03060 Nitronate monooxygenase Swol_1853 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Swol_1853 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Swol_1854 PF03060 Nitronate monooxygenase Swol_1855 PF00118 TCP-1/cpn60 chaperonin family Swol_1856 PF00166 Chaperonin 10 Kd subunit Swol_1857 PF00994 Probable molybdopterin binding domain Swol_1859 PF01967 MoaC family Swol_1860 PF04055 Radical SAM superfamily Swol_1860 PF06463 Molybdenum Cofactor Synthesis C Swol_1860 PF13353 4Fe-4S single cluster domain Swol_1862 PF01957 NfeD-like C-terminal, partner-binding Swol_1863 PF01145 SPFH domain / Band 7 family Swol_1864 PF01812 5-formyltetrahydrofolate cyclo-ligase family Swol_1865 PF01790 Swol_1865 Swol_1866 PF00814 Glycoprotease family Swol_1867 PF00583 Acetyltransferase (GNAT) family Swol_1868 PF00814 Glycoprotease family Swol_1869 PF02367 Uncharacterised P-loop hydrolase UPF0079 Swol_1870 PF03167 Uracil DNA glycosylase superfamily Swol_1871 PF00704 Glycosyl hydrolases family 18 Swol_1871 PF07833 Copper amine oxidase N-terminal domain Swol_1872 PF01979 Amidohydrolase family Swol_1874 PF02559 CarD-like/TRCF domain Swol_1876 PF02452 PemK-like protein Swol_1877 PF04014 Antidote-toxin recognition MazE Swol_1878 PF07722 Peptidase C26 Swol_1879 PF02452 PemK-like protein Swol_1881 PF01609 Transposase DDE domain Swol_1881 PF05598 Swol_1881 Swol_1882 PF00842 Alanine racemase, C-terminal domain Swol_1882 PF01168 Alanine racemase, N-terminal domain Swol_1883 PF00571 CBS domain Swol_1884 PF01256 Carbohydrate kinase Swol_1884 PF03853 YjeF-related protein N-terminus Swol_1885 PF01648 4'-phosphopantetheinyl transferase superfamily Swol_1886 PF01584 CheW-like domain Swol_1887 PF01206 Sulfurtransferase TusA Swol_1887 PF02635 DsrE/DsrF-like family Swol_1888 PF01471 Putative peptidoglycan binding domain Swol_1888 PF03734 L,D-transpeptidase catalytic domain Swol_1889 PF00950 Swol_1889 Swol_1890 PF00005 ABC transporter Swol_1891 PF01297 Periplasmic solute binding protein family Swol_1892 PF01475 Ferric uptake regulator family Swol_1893 PF09335 Swol_1893 Swol_1894 PF01966 HD domain Swol_1896 PF07875 Swol_1896 Swol_1897 PF00270 DEAD/DEAH box helicase Swol_1897 PF00271 Helicase conserved C-terminal domain Swol_1897 PF03880 DbpA RNA binding domain Swol_1899 PF00150 Cellulase (glycosyl hydrolase family 5) Swol_1900 PF00534 Glycosyl transferases group 1 Swol_1900 PF13439 Glycosyltransferase Family 4 Swol_1901 PF02645 Uncharacterised protein, DegV family COG1307 Swol_1902 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Swol_1902 PF07992 Pyridine nucleotide-disulphide oxidoreductase Swol_1904 PF03006 Swol_1904 Swol_1906 PF09579 Swol_1906 Swol_1907 PF00692 dUTPase Swol_1908 PF00535 Glycosyl transferase family 2 Swol_1908 PF13231 Swol_1908 Swol_1909 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Swol_1909 PF08388 Swol_1909 Swol_1910 PF13561 Enoyl-(Acyl carrier protein) reductase Swol_1911 PF01184 Swol_1911 Swol_1912 PF00266 Aminotransferase class-V Swol_1913 PF02588 Swol_1913 Swol_1913 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Swol_1914 PF00483 Nucleotidyl transferase Swol_1914 PF01050 Mannose-6-phosphate isomerase Swol_1915 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Swol_1915 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Swol_1915 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Swol_1915 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Swol_1916 PF00534 Glycosyl transferases group 1 Swol_1916 PF13439 Glycosyltransferase Family 4 Swol_1918 PF00512 His Kinase A (phospho-acceptor) domain Swol_1918 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_1918 PF08447 PAS fold Swol_1918 PF13426 PAS domain Swol_1919 PF04041 Domain of unknown function (DUF377) Swol_1920 PF01432 Peptidase family M3 Swol_1920 PF08439 Oligopeptidase F Swol_1921 PF03816 Cell envelope-related transcriptional attenuator domain Swol_1922 PF01926 50S ribosome-binding GTPase Swol_1922 PF13167 Swol_1922 Swol_1922 PF16360 Swol_1922 Swol_1923 PF02596 Swol_1923 Swol_1924 PF00395 S-layer homology domain Swol_1925 PF00037 4Fe-4S binding domain Swol_1925 PF02906 Iron only hydrogenase large subunit, C-terminal domain Swol_1926 PF02256 Iron hydrogenase small subunit Swol_1926 PF10518 TAT (twin-arginine translocation) pathway signal sequence Swol_1927 PF01292 Prokaryotic cytochrome b561 Swol_1931 PF00158 Sigma-54 interaction domain Swol_1931 PF00989 PAS fold Swol_1931 PF13426 PAS domain Swol_1932 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Swol_1932 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Swol_1933 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Swol_1933 PF02770 Acyl-CoA dehydrogenase, middle domain Swol_1933 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Swol_1933 PF12806 Swol_1933 Swol_1934 PF00108 Thiolase, N-terminal domain Swol_1934 PF02803 Thiolase, C-terminal domain Swol_1935 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Swol_1935 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Swol_1936 PF00378 Enoyl-CoA hydratase/isomerase family Swol_1938 PF00989 PAS fold Swol_1938 PF08448 PAS fold Swol_1938 PF13426 PAS domain Swol_1939 PF08984 Domain of unknown function (DUF1858) Swol_1940 PF13524 Glycosyl transferases group 1 Swol_1942 PF01370 NAD dependent epimerase/dehydratase family Swol_1945 PF01869 BadF/BadG/BcrA/BcrD ATPase family Swol_1945 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component Swol_1945 PF09989 Swol_1945 Swol_1946 PF13451 Swol_1946 Swol_1947 PF02361 Cobalt transport protein Swol_1948 PF00005 ABC transporter Swol_1949 PF00005 ABC transporter Swol_1950 PF02361 Cobalt transport protein Swol_1951 PF00005 ABC transporter Swol_1952 PF00005 ABC transporter Swol_1953 PF09819 Swol_1953 Swol_1954 PF07009 Protein of unknown function (DUF1312) Swol_1955 PF07456 Swol_1955 Swol_1956 PF02424 ApbE family Swol_1957 PF12801 Swol_1957 Swol_1958 PF00174 Oxidoreductase molybdopterin binding domain Swol_1959 PF04205 FMN-binding domain Swol_1961 PF00174 Oxidoreductase molybdopterin binding domain Swol_1961 PF13287 Swol_1961 Swol_1962 PF13287 Swol_1962 Swol_1963 PF00395 S-layer homology domain Swol_1963 PF13287 Swol_1963 Swol_1964 PF09919 Swol_1964 Swol_1965 PF01618 Swol_1965 Swol_1966 PF02368 Bacterial Ig-like domain (group 2) Swol_1966 PF13287 Swol_1966 Swol_1967 PF00149 Calcineurin-like phosphoesterase Swol_1967 PF00395 S-layer homology domain Swol_1967 PF07550 Swol_1967 Swol_1967 PF13290 Swol_1967 Swol_1967 PF16656 Swol_1967 Swol_1968 PF13290 Swol_1968 Swol_1969 PF00589 Phage integrase family Swol_1971 PF05016 Plasmid stabilisation system protein Swol_1972 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Swol_1973 PF11136 Swol_1973 Swol_1974 PF03099 Biotin/lipoate A/B protein ligase family Swol_1974 PF10437 Bacterial lipoate protein ligase C-terminus Swol_1975 PF01850 PIN domain Swol_1976 PF04014 Antidote-toxin recognition MazE Swol_1977 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Swol_1977 PF08388 Swol_1977 Swol_1978 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Swol_1978 PF07992 Pyridine nucleotide-disulphide oxidoreductase Swol_1980 PF02347 Glycine cleavage system P-protein Swol_1981 PF02347 Glycine cleavage system P-protein Swol_1982 PF01597 Glycine cleavage H-protein Swol_1983 PF01571 Aminomethyltransferase folate-binding domain Swol_1983 PF08669 Glycine cleavage T-protein C-terminal barrel domain Swol_1984 PF13539 D-alanyl-D-alanine carboxypeptidase Swol_1985 PF07883 Cupin domain Swol_1986 PF13205 Bacterial Ig-like domain Swol_1987 PF07550 Swol_1987 Swol_1988 PF02368 Bacterial Ig-like domain (group 2) Swol_1988 PF07833 Copper amine oxidase N-terminal domain Swol_1990 PF00174 Oxidoreductase molybdopterin binding domain Swol_1991 PF00395 S-layer homology domain Swol_1992 PF00149 Calcineurin-like phosphoesterase Swol_1992 PF16656 Swol_1992 Swol_1994 PF02586 Uncharacterised ACR, COG2135 Swol_1995 PF01894 Uncharacterised protein family UPF0047 Swol_1996 PF00027 Cyclic nucleotide-binding domain Swol_1997 PF00583 Acetyltransferase (GNAT) family Swol_1997 PF13581 Histidine kinase-like ATPase domain Swol_1998 PF05987 Swol_1998 Swol_2001 PF01609 Transposase DDE domain Swol_2003 PF06114 Domain of unknown function (DUF955) Swol_2004 PF01381 Helix-turn-helix Swol_2006 PF13271 Swol_2006 Swol_2007 PF04465 Swol_2007 Swol_2008 PF12686 Swol_2008 Swol_2009 PF06634 Swol_2009 Swol_2010 PF00176 SNF2 family N-terminal domain Swol_2010 PF00271 Helicase conserved C-terminal domain Swol_2010 PF13020 Swol_2010 Swol_2012 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Swol_2013 PF01464 Transglycosylase SLT domain Swol_2014 PF01121 Dephospho-CoA kinase Swol_2015 PF02659 Swol_2015 Swol_2016 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Swol_2016 PF06827 Zinc finger found in FPG and IleRS Swol_2016 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Swol_2017 PF00476 DNA polymerase family A Swol_2017 PF01367 5'-3' exonuclease, C-terminal SAM fold Swol_2017 PF01612 3'-5' exonuclease Swol_2017 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Swol_2018 PF13490 Putative zinc-finger Swol_2019 PF04542 Sigma-70 region 2 Swol_2019 PF08281 Sigma-70, region 4 Swol_2020 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) Swol_2021 PF03576 Peptidase family S58 Swol_2023 PF00535 Glycosyl transferase family 2 Swol_2025 PF04041 Domain of unknown function (DUF377) Swol_2027 PF00488 MutS domain V Swol_2028 PF01471 Putative peptidoglycan binding domain Swol_2029 PF00158 Sigma-54 interaction domain Swol_2029 PF02954 Bacterial regulatory protein, Fis family Swol_2029 PF13426 PAS domain Swol_2030 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Swol_2030 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Swol_2031 PF00378 Enoyl-CoA hydratase/isomerase family Swol_2033 PF01381 Helix-turn-helix Swol_2034 PF04994 TfoX C-terminal domain Swol_2037 PF05685 Putative restriction endonuclease Swol_2037 PF12728 Helix-turn-helix domain Swol_2038 PF00005 ABC transporter Swol_2039 PF16949 Swol_2039 Swol_2040 PF00224 Pyruvate kinase, barrel domain Swol_2040 PF00391 PEP-utilising enzyme, mobile domain Swol_2040 PF02887 Pyruvate kinase, alpha/beta domain Swol_2041 PF00365 Phosphofructokinase Swol_2042 PF02081 Tryptophan RNA-binding attenuator protein Swol_2043 PF01336 OB-fold nucleic acid binding domain Swol_2043 PF02811 PHP domain Swol_2043 PF07733 Bacterial DNA polymerase III alpha subunit Swol_2043 PF14579 Helix-hairpin-helix motif Swol_2044 PF04073 Aminoacyl-tRNA editing domain Swol_2045 PF00269 Small, acid-soluble spore proteins, alpha/beta type Swol_2046 PF13419 Haloacid dehalogenase-like hydrolase Swol_2047 PF02627 Carboxymuconolactone decarboxylase family Swol_2049 PF01694 Rhomboid family Swol_2051 PF00108 Thiolase, N-terminal domain Swol_2051 PF02803 Thiolase, C-terminal domain Swol_2052 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Swol_2052 PF02770 Acyl-CoA dehydrogenase, middle domain Swol_2052 PF12806 Swol_2052 Swol_2053 PF00158 Sigma-54 interaction domain Swol_2053 PF00571 CBS domain Swol_2053 PF13188 PAS domain Swol_2053 PF13426 PAS domain Swol_2054 PF00753 Metallo-beta-lactamase superfamily Swol_2054 PF07992 Pyridine nucleotide-disulphide oxidoreductase Swol_2058 PF04542 Sigma-70 region 2 Swol_2058 PF08281 Sigma-70, region 4 Swol_2060 PF00672 HAMP domain Swol_2060 PF02743 Cache domain Swol_2060 PF07228 Stage II sporulation protein E (SpoIIE) Swol_2061 PF01554 MatE Swol_2062 PF13466 STAS domain Swol_2063 PF01471 Putative peptidoglycan binding domain Swol_2064 PF03062 Swol_2064 Swol_2065 PF00196 Bacterial regulatory proteins, luxR family Swol_2067 PF00004 ATPase family associated with various cellular activities (AAA) Swol_2070 PF08487 Swol_2070 Swol_2070 PF13768 von Willebrand factor type A domain Swol_2071 PF13411 MerR HTH family regulatory protein Swol_2072 PF13087 AAA domain Swol_2074 PF01527 Transposase Swol_2075 PF00176 SNF2 family N-terminal domain Swol_2075 PF00271 Helicase conserved C-terminal domain Swol_2079 PF00665 Integrase core domain Swol_2079 PF13276 Swol_2079 Swol_2080 PF12710 haloacid dehalogenase-like hydrolase Swol_2082 PF01810 Swol_2082 Swol_2083 PF01925 Swol_2083 Swol_2084 PF12146 Putative lysophospholipase Swol_2085 PF13538 UvrD-like helicase C-terminal domain Swol_2085 PF13604 AAA domain Swol_2085 PF14490 Helix-hairpin-helix containing domain Swol_2085 PF14520 Helix-hairpin-helix domain Swol_2086 PF00122 E1-E2 ATPase Swol_2086 PF00403 Heavy-metal-associated domain Swol_2086 PF00702 haloacid dehalogenase-like hydrolase Swol_2087 PF01022 Bacterial regulatory protein, arsR family Swol_2088 PF01206 Sulfurtransferase TusA Swol_2089 PF04143 Swol_2089 Swol_2090 PF02001 Swol_2090 Swol_2091 PF03600 Citrate transporter Swol_2092 PF00990 GGDEF domain Swol_2092 PF13188 PAS domain Swol_2092 PF13426 PAS domain Swol_2093 PF00155 Aminotransferase class I and II Swol_2094 PF00005 ABC transporter Swol_2095 PF02492 CobW/HypB/UreG, nucleotide-binding domain Swol_2096 PF08984 Domain of unknown function (DUF1858) Swol_2096 PF13343 Bacterial extracellular solute-binding protein Swol_2097 PF01497 Periplasmic binding protein Swol_2099 PF01380 SIS domain Swol_2100 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Swol_2100 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Swol_2100 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Swol_2100 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Swol_2101 PF13450 NAD(P)-binding Rossmann-like domain Swol_2102 PF07949 YbbR-like protein Swol_2103 PF02457 DisA bacterial checkpoint controller nucleotide-binding Swol_2104 PF04263 Thiamin pyrophosphokinase, catalytic domain Swol_2104 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain Swol_2105 PF12838 4Fe-4S dicluster domain Swol_2106 PF00072 Response regulator receiver domain Swol_2106 PF00989 PAS fold Swol_2106 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_2106 PF13426 PAS domain Swol_2107 PF00588 SpoU rRNA Methylase family Swol_2108 PF08486 Swol_2108 Swol_2109 PF00892 EamA-like transporter family Swol_2110 PF00005 ABC transporter Swol_2110 PF12399 Branched-chain amino acid ATP-binding cassette transporter Swol_2111 PF02653 Swol_2111 Swol_2112 PF02653 Swol_2112 Swol_2113 PF13458 Periplasmic binding protein Swol_2114 PF03692 Swol_2114 Swol_2115 PF00075 RNase H Swol_2116 PF10719 Swol_2116 Swol_2117 PF09723 Swol_2117 Swol_2118 PF02517 CAAX protease self-immunity Swol_2121 PF00766 Electron transfer flavoprotein FAD-binding domain Swol_2121 PF01012 Electron transfer flavoprotein domain Swol_2122 PF01012 Electron transfer flavoprotein domain Swol_2123 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase Swol_2124 PF01494 FAD binding domain Swol_2126 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Swol_2126 PF02770 Acyl-CoA dehydrogenase, middle domain Swol_2126 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Swol_2127 PF01047 MarR family Swol_2128 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Swol_2128 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Swol_2129 PF00378 Enoyl-CoA hydratase/isomerase family Swol_2130 PF00072 Response regulator receiver domain Swol_2130 PF13487 HD domain Swol_2131 PF00072 Response regulator receiver domain Swol_2132 PF00512 His Kinase A (phospho-acceptor) domain Swol_2132 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_2132 PF08447 PAS fold Swol_2132 PF08448 PAS fold Swol_2132 PF13426 PAS domain Swol_2133 PF05762 VWA domain containing CoxE-like protein Swol_2134 PF00004 ATPase family associated with various cellular activities (AAA) Swol_2135 PF03486 HI0933-like protein Swol_2137 PF00132 Bacterial transferase hexapeptide (six repeats) Swol_2137 PF00483 Nucleotidyl transferase Swol_2139 PF00682 HMGL-like Swol_2139 PF08502 LeuA allosteric (dimerisation) domain Swol_2140 PF00180 Isocitrate/isopropylmalate dehydrogenase Swol_2141 PF00694 Aconitase C-terminal domain Swol_2142 PF00330 Aconitase family (aconitate hydratase) Swol_2143 PF00682 HMGL-like Swol_2143 PF08502 LeuA allosteric (dimerisation) domain Swol_2144 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Swol_2144 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain Swol_2145 PF10369 Small subunit of acetolactate synthase Swol_2145 PF13710 ACT domain Swol_2146 PF00205 Thiamine pyrophosphate enzyme, central domain Swol_2146 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Swol_2146 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Swol_2147 PF00920 Dehydratase family Swol_2148 PF01063 Aminotransferase class IV Swol_2150 PF01966 HD domain Swol_2151 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Swol_2151 PF02743 Cache domain Swol_2152 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Swol_2152 PF02743 Cache domain Swol_2154 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Swol_2154 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Swol_2154 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Swol_2154 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Swol_2156 PF10131 Swol_2156 Swol_2157 PF00535 Glycosyl transferase family 2 Swol_2157 PF04138 Swol_2157 Swol_2158 PF00535 Glycosyl transferase family 2 Swol_2160 PF01242 6-pyruvoyl tetrahydropterin synthase Swol_2160 PF10131 Swol_2160 Swol_2162 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Swol_2162 PF00672 HAMP domain Swol_2162 PF02743 Cache domain Swol_2164 PF00881 Nitroreductase family Swol_2166 PF03600 Citrate transporter Swol_2167 PF01145 SPFH domain / Band 7 family Swol_2168 PF01814 Hemerythrin HHE cation binding domain Swol_2169 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) Swol_2170 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Swol_2170 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Swol_2171 PF00850 Histone deacetylase domain Swol_2172 PF07690 Major Facilitator Superfamily Swol_2174 PF00583 Acetyltransferase (GNAT) family Swol_2175 PF00586 AIR synthase related protein, N-terminal domain Swol_2175 PF02769 AIR synthase related protein, C-terminal domain Swol_2176 PF00512 His Kinase A (phospho-acceptor) domain Swol_2176 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_2177 PF00072 Response regulator receiver domain Swol_2177 PF00486 Transcriptional regulatory protein, C terminal Swol_2178 PF09359 VTC domain Swol_2179 PF16316 Swol_2179 Swol_2180 PF08757 Swol_2180 Swol_2181 PF00578 AhpC/TSA family Swol_2182 PF00578 AhpC/TSA family Swol_2182 PF10417 C-terminal domain of 1-Cys peroxiredoxin Swol_2183 PF00395 S-layer homology domain Swol_2183 PF02368 Bacterial Ig-like domain (group 2) Swol_2184 PF13365 Trypsin-like peptidase domain Swol_2185 PF12773 Swol_2185 Swol_2186 PF02915 Rubrerythrin Swol_2189 PF00027 Cyclic nucleotide-binding domain Swol_2189 PF13545 Crp-like helix-turn-helix domain Swol_2190 PF03063 Prismane/CO dehydrogenase family Swol_2191 PF07883 Cupin domain Swol_2192 PF01797 Transposase IS200 like Swol_2195 PF00872 Swol_2195 Swol_2196 PF01844 HNH endonuclease Swol_2198 PF01797 Transposase IS200 like Swol_2199 PF04860 Phage portal protein Swol_2200 PF00665 Integrase core domain Swol_2201 PF01527 Transposase Swol_2202 PF05717 Swol_2202 Swol_2203 PF03050 Swol_2203 Swol_2203 PF13005 Swol_2203 Swol_2203 PF13007 Swol_2203 Swol_2203 PF13817 Swol_2203 Swol_2205 PF01695 IstB-like ATP binding protein Swol_2206 PF13470 Swol_2206 Swol_2207 PF03235 Swol_2207 Swol_2207 PF07510 Swol_2207 Swol_2208 PF03235 Swol_2208 Swol_2209 PF01527 Transposase Swol_2210 PF05717 Swol_2210 Swol_2211 PF03050 Swol_2211 Swol_2211 PF13005 Swol_2211 Swol_2211 PF13007 Swol_2211 Swol_2211 PF13817 Swol_2211 Swol_2212 PF03235 Swol_2212 Swol_2214 PF07205 Swol_2214 Swol_2216 PF01695 IstB-like ATP binding protein Swol_2218 PF00665 Integrase core domain Swol_2219 PF01695 IstB-like ATP binding protein Swol_2222 PF00665 Integrase core domain Swol_2222 PF13276 Swol_2222 Swol_2223 PF01527 Transposase Swol_2225 PF01938 TRAM domain Swol_2225 PF05958 tRNA (Uracil-5-)-methyltransferase Swol_2226 PF12850 Calcineurin-like phosphoesterase superfamily domain Swol_2228 PF02653 Swol_2228 Swol_2230 PF00005 ABC transporter Swol_2230 PF00664 ABC transporter transmembrane region Swol_2230 PF03412 Peptidase C39 family Swol_2231 PF00005 ABC transporter Swol_2231 PF00664 ABC transporter transmembrane region Swol_2232 PF09860 Swol_2232 Swol_2234 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Swol_2235 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Swol_2235 PF17147 Swol_2235 Swol_2236 PF00037 4Fe-4S binding domain Swol_2237 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Swol_2238 PF01609 Transposase DDE domain Swol_2240 PF07690 Major Facilitator Superfamily Swol_2241 PF01906 Putative heavy-metal-binding Swol_2243 PF00005 ABC transporter Swol_2244 PF00392 Bacterial regulatory proteins, gntR family Swol_2245 PF05742 Swol_2245 Swol_2248 PF06114 Domain of unknown function (DUF955) Swol_2252 PF00589 Phage integrase family Swol_2252 PF14659 Phage integrase, N-terminal SAM-like domain Swol_2253 PF00082 Subtilase family Swol_2254 PF00004 ATPase family associated with various cellular activities (AAA) Swol_2255 PF01863 Protein of unknown function DUF45 Swol_2256 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) Swol_2256 PF04851 Type III restriction enzyme, res subunit Swol_2257 PF01420 Type I restriction modification DNA specificity domain Swol_2258 PF02384 N-6 DNA Methylase Swol_2258 PF12161 HsdM N-terminal domain Swol_2259 PF06803 Swol_2259 Swol_2260 PF13155 Toprim-like Swol_2262 PF04002 RadC-like JAB domain Swol_2263 PF09588 YqaJ-like viral recombinase domain Swol_2267 PF00589 Phage integrase family Swol_2267 PF14659 Phage integrase, N-terminal SAM-like domain Swol_2269 PF13676 TIR domain Swol_2271 PF04794 YdjC-like protein Swol_2272 PF04055 Radical SAM superfamily Swol_2272 PF13353 4Fe-4S single cluster domain Swol_2273 PF03477 ATP cone domain Swol_2273 PF13597 Anaerobic ribonucleoside-triphosphate reductase Swol_2275 PF02661 Fic/DOC family Swol_2278 PF02493 MORN repeat Swol_2279 PF13280 Swol_2279 Swol_2280 PF13393 Histidyl-tRNA synthetase Swol_2281 PF03050 Swol_2281 Swol_2281 PF13005 Swol_2281 Swol_2281 PF13007 Swol_2281 Swol_2281 PF13817 Swol_2281 Swol_2282 PF05717 Swol_2282 Swol_2284 PF03129 Anticodon binding domain Swol_2286 PF07833 Copper amine oxidase N-terminal domain Swol_2287 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Swol_2287 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Swol_2288 PF00202 Aminotransferase class-III Swol_2289 PF00696 Amino acid kinase family Swol_2290 PF01960 ArgJ family Swol_2291 PF01118 Semialdehyde dehydrogenase, NAD binding domain Swol_2291 PF02774 Semialdehyde dehydrogenase, dimerisation domain Swol_2292 PF01980 Uncharacterised protein family UPF0066 Swol_2293 PF04055 Radical SAM superfamily Swol_2294 PF01871 AMMECR1 Swol_2294 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Swol_2295 PF01520 N-acetylmuramoyl-L-alanine amidase Swol_2296 PF02493 MORN repeat Swol_2297 PF00380 Ribosomal protein S9/S16 Swol_2298 PF00572 Ribosomal protein L13 Swol_2299 PF01416 tRNA pseudouridine synthase Swol_2300 PF02361 Cobalt transport protein Swol_2301 PF00005 ABC transporter Swol_2302 PF00005 ABC transporter Swol_2303 PF01196 Ribosomal protein L17 Swol_2304 PF01000 RNA polymerase Rpb3/RpoA insert domain Swol_2304 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Swol_2304 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Swol_2305 PF00163 Ribosomal protein S4/S9 N-terminal domain Swol_2305 PF01479 S4 domain Swol_2306 PF00411 Ribosomal protein S11 Swol_2307 PF00416 Ribosomal protein S13/S18 Swol_2308 PF00444 Ribosomal protein L36 Swol_2309 PF01176 Translation initiation factor 1A / IF-1 Swol_2311 PF00557 Metallopeptidase family M24 Swol_2312 PF00406 Adenylate kinase Swol_2312 PF05191 Adenylate kinase, active site lid Swol_2313 PF00344 SecY translocase Swol_2314 PF00828 Ribosomal protein L18e/L15 Swol_2315 PF00327 Ribosomal protein L30p/L7e Swol_2316 PF00333 Ribosomal protein S5, N-terminal domain Swol_2316 PF03719 Ribosomal protein S5, C-terminal domain Swol_2317 PF00861 Ribosomal L18p/L5e family Swol_2318 PF00347 Ribosomal protein L6 Swol_2319 PF00410 Ribosomal protein S8 Swol_2320 PF00253 Ribosomal protein S14p/S29e Swol_2321 PF00281 Ribosomal protein L5 Swol_2321 PF00673 ribosomal L5P family C-terminus Swol_2322 PF00467 KOW motif Swol_2322 PF17136 Swol_2322 Swol_2323 PF00238 Ribosomal protein L14p/L23e Swol_2324 PF00366 Ribosomal protein S17 Swol_2325 PF00831 Ribosomal L29 protein Swol_2326 PF00252 Ribosomal protein L16p/L10e Swol_2327 PF00189 Ribosomal protein S3, C-terminal domain Swol_2327 PF07650 KH domain Swol_2328 PF00237 Ribosomal protein L22p/L17e Swol_2329 PF00203 Ribosomal protein S19 Swol_2330 PF00181 Ribosomal Proteins L2, RNA binding domain Swol_2330 PF03947 Ribosomal Proteins L2, C-terminal domain Swol_2331 PF00276 Ribosomal protein L23 Swol_2332 PF00573 Ribosomal protein L4/L1 family Swol_2333 PF00297 Ribosomal protein L3 Swol_2334 PF00338 Ribosomal protein S10p/S20e Swol_2335 PF00009 Elongation factor Tu GTP binding domain Swol_2335 PF03143 Elongation factor Tu C-terminal domain Swol_2335 PF03144 Elongation factor Tu domain 2 Swol_2336 PF00009 Elongation factor Tu GTP binding domain Swol_2336 PF00679 Elongation factor G C-terminus Swol_2336 PF03144 Elongation factor Tu domain 2 Swol_2336 PF03764 Elongation factor G, domain IV Swol_2336 PF14492 Elongation Factor G, domain II Swol_2337 PF00177 Ribosomal protein S7p/S5e Swol_2338 PF00164 Ribosomal protein S12/S23 Swol_2339 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Swol_2340 PF00623 RNA polymerase Rpb1, domain 2 Swol_2340 PF04983 RNA polymerase Rpb1, domain 3 Swol_2340 PF04997 RNA polymerase Rpb1, domain 1 Swol_2340 PF04998 RNA polymerase Rpb1, domain 5 Swol_2340 PF05000 RNA polymerase Rpb1, domain 4 Swol_2341 PF00562 RNA polymerase Rpb2, domain 6 Swol_2341 PF04560 RNA polymerase Rpb2, domain 7 Swol_2341 PF04561 RNA polymerase Rpb2, domain 2 Swol_2341 PF04563 RNA polymerase beta subunit Swol_2341 PF04565 RNA polymerase Rpb2, domain 3 Swol_2341 PF10385 RNA polymerase beta subunit external 1 domain Swol_2343 PF00542 Ribosomal protein L7/L12 C-terminal domain Swol_2343 PF16320 Swol_2343 Swol_2344 PF00466 Ribosomal protein L10 Swol_2345 PF00687 Ribosomal protein L1p/L10e family Swol_2346 PF00298 Ribosomal protein L11, RNA binding domain Swol_2346 PF03946 Ribosomal protein L11, N-terminal domain Swol_2347 PF02357 Transcription termination factor nusG Swol_2348 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Swol_2349 PF00471 Ribosomal protein L33 Swol_2350 PF00009 Elongation factor Tu GTP binding domain Swol_2350 PF03143 Elongation factor Tu C-terminal domain Swol_2350 PF03144 Elongation factor Tu domain 2 Swol_2351 PF04542 Sigma-70 region 2 Swol_2351 PF08281 Sigma-70, region 4 Swol_2352 PF00588 SpoU rRNA Methylase family Swol_2352 PF08032 RNA 2'-O ribose methyltransferase substrate binding Swol_2353 PF02511 Thymidylate synthase complementing protein Swol_2354 PF00636 Ribonuclease III domain Swol_2356 PF00132 Bacterial transferase hexapeptide (six repeats) Swol_2357 PF00749 tRNA synthetases class I (E and Q), catalytic domain Swol_2358 PF06207 Swol_2358 Swol_2360 PF02542 YgbB family Swol_2361 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Swol_2362 PF13638 PIN domain Swol_2363 PF00258 Flavodoxin Swol_2363 PF00753 Metallo-beta-lactamase superfamily Swol_2363 PF06902 Divergent 4Fe-4S mono-cluster Swol_2365 PF00633 Helix-hairpin-helix motif Swol_2365 PF02457 DisA bacterial checkpoint controller nucleotide-binding Swol_2365 PF10635 DisA bacterial checkpoint controller linker region Swol_2366 PF13481 AAA domain Swol_2366 PF13541 Subunit ChlI of Mg-chelatase Swol_2367 PF00004 ATPase family associated with various cellular activities (AAA) Swol_2367 PF02151 UvrB/uvrC motif Swol_2367 PF02861 Clp amino terminal domain Swol_2367 PF07724 AAA domain (Cdc48 subfamily) Swol_2367 PF10431 C-terminal, D2-small domain, of ClpB protein Swol_2368 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain Swol_2369 PF02151 UvrB/uvrC motif Swol_2370 PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) Swol_2371 PF14450 Cell division protein FtsA Swol_2372 PF03808 Swol_2372 Swol_2373 PF00460 Flagella basal body rod protein Swol_2373 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Swol_2374 PF06723 MreB/Mbl protein Swol_2375 PF12116 Stage III sporulation protein D Swol_2376 PF08486 Swol_2376 Swol_2377 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Swol_2378 PF08680 Protein of unknown function (DUF1779) Swol_2381 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Swol_2381 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Swol_2382 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Swol_2382 PF02874 ATP synthase alpha/beta family, beta-barrel domain Swol_2383 PF00231 ATP synthase Swol_2384 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Swol_2384 PF00306 ATP synthase alpha/beta chain, C terminal domain Swol_2384 PF02874 ATP synthase alpha/beta family, beta-barrel domain Swol_2385 PF00213 ATP synthase delta (OSCP) subunit Swol_2386 PF00430 ATP synthase B/B' CF(0) Swol_2387 PF00137 ATP synthase subunit C Swol_2388 PF00119 ATP synthase A chain Swol_2389 PF09527 Swol_2389 Swol_2390 PF03819 MazG nucleotide pyrophosphohydrolase domain Swol_2391 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Swol_2392 PF00464 Serine hydroxymethyltransferase Swol_2393 PF01451 Low molecular weight phosphotyrosine protein phosphatase Swol_2394 PF02659 Swol_2394 Swol_2395 PF01300 Telomere recombination Swol_2395 PF03481 Putative GTP-binding controlling metal-binding Swol_2396 PF13847 Methyltransferase domain Swol_2397 PF00472 RF-1 domain Swol_2397 PF03462 PCRF domain Swol_2398 PF07136 Swol_2398 Swol_2399 PF01197 Ribosomal protein L31 Swol_2400 PF00072 Response regulator receiver domain Swol_2400 PF04397 LytTr DNA-binding domain Swol_2401 PF14501 GHKL domain Swol_2401 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain Swol_2402 PF01145 SPFH domain / Band 7 family Swol_2403 PF03473 MOSC domain Swol_2404 PF01966 HD domain Swol_2405 PF04055 Radical SAM superfamily Swol_2406 PF01476 LysM domain Swol_2406 PF01551 Peptidase family M23 Swol_2407 PF01966 HD domain Swol_2408 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Swol_2408 PF07497 Rho termination factor, RNA-binding domain Swol_2408 PF07498 Rho termination factor, N-terminal domain Swol_2409 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Swol_2410 PF00923 Transaldolase Swol_2411 PF01116 Fructose-bisphosphate aldolase class-II Swol_2412 PF00072 Response regulator receiver domain Swol_2413 PF04893 Swol_2413 Swol_2415 PF01343 Peptidase family S49 Swol_2416 PF00842 Alanine racemase, C-terminal domain Swol_2416 PF01168 Alanine racemase, N-terminal domain Swol_2417 PF02388 FemAB family Swol_2418 PF00117 Glutamine amidotransferase class-I Swol_2418 PF06418 CTP synthase N-terminus Swol_2419 PF13483 Beta-lactamase superfamily domain Swol_2421 PF00750 tRNA synthetases class I (R) Swol_2421 PF03485 Arginyl tRNA synthetase N terminal domain Swol_2421 PF05746 DALR anticodon binding domain Swol_2423 PF01433 Peptidase family M1 Swol_2424 PF01590 GAF domain Swol_2424 PF01966 HD domain Swol_2425 PF13686 DsrE/DsrF/DrsH-like family Swol_2426 PF13274 Swol_2426 Swol_2427 PF15723 Swol_2427 Swol_2428 PF01541 GIY-YIG catalytic domain Swol_2429 PF00266 Aminotransferase class-V Swol_2430 PF00005 ABC transporter Swol_2430 PF09383 NIL domain Swol_2431 PF00528 Binding-protein-dependent transport system inner membrane component Swol_2432 PF03180 NLPA lipoprotein Swol_2433 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Swol_2434 PF03061 Thioesterase superfamily Swol_2435 PF00989 PAS fold Swol_2435 PF00990 GGDEF domain Swol_2435 PF08447 PAS fold Swol_2436 PF00037 4Fe-4S binding domain Swol_2436 PF02256 Iron hydrogenase small subunit Swol_2436 PF02906 Iron only hydrogenase large subunit, C-terminal domain Swol_2436 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Swol_2436 PF13510 2Fe-2S iron-sulfur cluster binding domain Swol_2438 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Swol_2439 PF13641 Glycosyltransferase like family 2 Swol_2440 PF13646 HEAT repeats Swol_2441 PF00072 Response regulator receiver domain Swol_2443 PF12706 Beta-lactamase superfamily domain Swol_2444 PF00534 Glycosyl transferases group 1 Swol_2445 PF02585 GlcNAc-PI de-N-acetylase Swol_2446 PF16576 Swol_2446 Swol_2447 PF00005 ABC transporter Swol_2448 PF00005 ABC transporter Swol_2449 PF12698 ABC-2 family transporter protein Swol_2450 PF00440 Bacterial regulatory proteins, tetR family Swol_2451 PF05598 Swol_2451 Swol_2451 PF13751 Swol_2451 Swol_2452 PF00484 Carbonic anhydrase Swol_2453 PF13091 PLD-like domain Swol_2453 PF13396 Swol_2453 Swol_2454 PF00696 Amino acid kinase family Swol_2456 PF16576 Swol_2456 Swol_2457 PF00005 ABC transporter Swol_2458 PF02687 Swol_2458 Swol_2458 PF12704 MacB-like periplasmic core domain Swol_2459 PF00749 tRNA synthetases class I (E and Q), catalytic domain Swol_2459 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain Swol_2460 PF00578 AhpC/TSA family Swol_2462 PF12801 Swol_2462 Swol_2462 PF13746 4Fe-4S dicluster domain Swol_2463 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Swol_2463 PF08388 Swol_2463 Swol_2464 PF01906 Putative heavy-metal-binding Swol_2465 PF01609 Transposase DDE domain Swol_2465 PF05598 Swol_2465 Swol_2466 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Swol_2466 PF05685 Putative restriction endonuclease Swol_2467 PF02590 Predicted SPOUT methyltransferase Swol_2468 PF13205 Bacterial Ig-like domain Swol_2469 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Swol_2470 PF13485 Peptidase MA superfamily Swol_2471 PF07992 Pyridine nucleotide-disulphide oxidoreductase Swol_2472 PF01476 LysM domain Swol_2472 PF01551 Peptidase family M23 Swol_2472 PF07501 G5 domain Swol_2473 PF04055 Radical SAM superfamily Swol_2473 PF13186 Iron-sulfur cluster-binding domain Swol_2473 PF13353 4Fe-4S single cluster domain Swol_2474 PF01850 PIN domain Swol_2475 PF04014 Antidote-toxin recognition MazE Swol_2476 PF13343 Bacterial extracellular solute-binding protein Swol_2477 PF00528 Binding-protein-dependent transport system inner membrane component Swol_2478 PF00005 ABC transporter Swol_2479 PF13343 Bacterial extracellular solute-binding protein Swol_2480 PF00528 Binding-protein-dependent transport system inner membrane component Swol_2481 PF00005 ABC transporter Swol_2481 PF08402 TOBE domain Swol_2482 PF02811 PHP domain Swol_2482 PF13263 PHP-associated Swol_2483 PF00990 GGDEF domain Swol_2483 PF08447 PAS fold Swol_2483 PF13426 PAS domain Swol_2483 PF13487 HD domain Swol_2486 PF01497 Periplasmic binding protein Swol_2487 PF13205 Bacterial Ig-like domain Swol_2488 PF05362 Lon protease (S16) C-terminal proteolytic domain Swol_2488 PF13337 Swol_2488 Swol_2489 PF08665 Swol_2489 Swol_2493 PF07669 Eco57I restriction-modification methylase Swol_2495 PF08747 Domain of unknown function (DUF1788) Swol_2496 PF08849 Putative inner membrane protein (DUF1819) Swol_2497 PF00395 S-layer homology domain Swol_2498 PF00326 Prolyl oligopeptidase family Swol_2499 PF03358 NADPH-dependent FMN reductase Swol_2500 PF01436 NHL repeat Swol_2500 PF12799 Leucine Rich repeats (2 copies) Swol_2500 PF13620 Carboxypeptidase regulatory-like domain Swol_2502 PF01609 Transposase DDE domain Swol_2502 PF05598 Swol_2502 Swol_2504 PF01927 Swol_2504 Swol_2505 PF04255 Protein of unknown function (DUF433) Swol_2508 PF13683 Swol_2508 Swol_2509 PF00665 Integrase core domain Swol_2510 PF01527 Transposase Swol_2514 PF10040 Uncharacterized conserved protein (DUF2276) Swol_2515 PF09827 CRISPR associated protein Cas2 Swol_2516 PF01867 CRISPR associated protein Cas1 Swol_2517 PF01930 Domain of unknown function DUF83 Swol_2518 PF00271 Helicase conserved C-terminal domain Swol_2518 PF01966 HD domain Swol_2518 PF04851 Type III restriction enzyme, res subunit Swol_2519 PF09704 CRISPR-associated protein (Cas_Cas5) Swol_2520 PF05107 Swol_2520 Swol_2521 PF09484 Swol_2521 Swol_2522 PF09484 Swol_2522 Swol_2524 PF03787 RAMP superfamily Swol_2526 PF03787 RAMP superfamily Swol_2527 PF03787 RAMP superfamily Swol_2529 PF09002 Domain of unknown function (DUF1887) Swol_2533 PF00709 Adenylosuccinate synthetase Swol_2534 PF00004 ATPase family associated with various cellular activities (AAA) Swol_2534 PF05362 Lon protease (S16) C-terminal proteolytic domain Swol_2535 PF01281 Ribosomal protein L9, N-terminal domain Swol_2535 PF03948 Ribosomal protein L9, C-terminal domain Swol_2536 PF09991 Swol_2536 Swol_2537 PF12643 Swol_2537 Swol_2538 PF01084 Ribosomal protein S18 Swol_2539 PF00436 Single-strand binding protein family Swol_2540 PF01250 Ribosomal protein S6 Swol_2541 PF06107 Swol_2541 Swol_2542 PF00586 AIR synthase related protein, N-terminal domain Swol_2542 PF02769 AIR synthase related protein, C-terminal domain Swol_2543 PF02127 Aminopeptidase I zinc metalloprotease (M18) Swol_2544 PF02674 Swol_2544 Swol_2545 PF09335 Swol_2545 Swol_2546 PF00989 PAS fold Swol_2546 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Swol_2546 PF08447 PAS fold Swol_2546 PF08448 PAS fold Swol_2546 PF13426 PAS domain Swol_2547 PF00072 Response regulator receiver domain Swol_2547 PF13487 HD domain Swol_2548 PF02661 Fic/DOC family Swol_2551 PF00571 CBS domain Swol_2551 PF01842 ACT domain Swol_2552 PF00005 ABC transporter Swol_2553 PF00005 ABC transporter Swol_2553 PF12399 Branched-chain amino acid ATP-binding cassette transporter Swol_2554 PF02653 Swol_2554 Swol_2555 PF02653 Swol_2555 Swol_2556 PF13458 Periplasmic binding protein Swol_2557 PF01869 BadF/BadG/BcrA/BcrD ATPase family Swol_2558 PF09989 Swol_2558 Swol_2559 PF09989 Swol_2559 Swol_2560 PF00009 Elongation factor Tu GTP binding domain Swol_2560 PF03144 Elongation factor Tu domain 2 Swol_2560 PF09106 Elongation factor SelB, winged helix Swol_2560 PF09107 Elongation factor SelB, winged helix Swol_2561 PF03841 L-seryl-tRNA selenium transferase Swol_2561 PF12390 Swol_2561 Swol_2563 PF06866 Swol_2563 Swol_2564 PF04519 Swol_2564 Swol_2565 PF01551 Peptidase family M23 Swol_2566 PF00378 Enoyl-CoA hydratase/isomerase family Swol_2567 PF02195 ParB-like nuclease domain Swol_2568 PF13614 AAA domain Swol_2569 PF02195 ParB-like nuclease domain Swol_2570 PF02527 rRNA small subunit methyltransferase G Swol_2571 PF01134 Glucose inhibited division protein A Swol_2571 PF13932 GidA associated domain 3 Swol_2572 PF01926 50S ribosome-binding GTPase Swol_2572 PF10396 GTP-binding protein TrmE N-terminus Swol_2572 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE Swol_2573 PF01424 R3H domain Swol_2573 PF13083 KH domain Swol_2573 PF14804 Jag N-terminus Swol_2575 PF01809 Swol_2575 Swol_2576 PF00825 Ribonuclease P Swol_2577 PF00468 Ribosomal protein L34