Swol_0001 SM00382 ATPases associated with a variety of cellular activities Swol_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain Swol_0002 SM00480 DNA polymerase III beta subunit Swol_0005 SM00387 Histidine kinase-like ATPases Swol_0005 SM00433 TopoisomeraseII Swol_0006 SM00434 DNA Topoisomerase IV Swol_0011 SM00267 diguanylate cyclase Swol_0012 SM00897 FIST N domain Swol_0012 SM01204 Swol_0012 Swol_0023 SM00382 ATPases associated with a variety of cellular activities Swol_0028 SM00981 Swol_0028 Swol_0030 SM00382 ATPases associated with a variety of cellular activities Swol_0032 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Swol_0047 SM00966 SpoVT / AbrB like domain Swol_0051 SM01208 Swol_0051 Swol_0053 SM00650 Ribosomal RNA adenine dimethylases Swol_0065 SM00345 helix_turn_helix gluconate operon transcriptional repressor Swol_0065 SM00895 Swol_0065 Swol_0068 SM01400 Swol_0068 Swol_0073 SM00487 DEAD-like helicases superfamily Swol_0073 SM00490 helicase superfamily c-terminal domain Swol_0073 SM00982 Swol_0073 Swol_0073 SM01058 CarD-like/TRCF domain Swol_0080 SM00966 SpoVT / AbrB like domain Swol_0083 SM00411 bacterial (prokaryotic) histone like domain Swol_0084 SM00363 S4 RNA-binding domain Swol_0089 SM00316 Ribosomal protein S1-like RNA-binding domain Swol_0093 SM00331 Sigma factor PP2C-like phosphatases Swol_0094 SM00977 TilS substrate C-terminal domain Swol_0095 SM00382 ATPases associated with a variety of cellular activities Swol_0096 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Swol_0098 SM00905 Dihydroneopterin aldolase Swol_0126 SM00287 Bacterial SH3 domain homologues Swol_0126 SM00646 Swol_0126 Swol_0136 SM01321 Swol_0136 Swol_0148 SM01321 Swol_0148 Swol_0158 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Swol_0162 SM00635 Bacterial Ig-like domain 2 Swol_0164 SM01321 Swol_0164 Swol_0165 SM00564 beta-propeller repeat Swol_0168 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Swol_0168 SM00245 tail specific protease Swol_0169 SM00460 Transglutaminase/protease-like homologues Swol_0173 SM00028 Tetratricopeptide repeats Swol_0173 SM01043 Bacterial transcriptional activator domain Swol_0174 SM00237 Domains in Na-Ca exchangers and integrin-beta4 Swol_0180 SM00382 ATPases associated with a variety of cellular activities Swol_0185 SM00387 Histidine kinase-like ATPases Swol_0186 SM00421 helix_turn_helix, Lux Regulon Swol_0186 SM00448 cheY-homologous receiver domain Swol_0210 SM00858 Swol_0210 Swol_0225 SM00966 SpoVT / AbrB like domain Swol_0238 SM00957 SecA DEAD-like domain Swol_0238 SM00958 SecA preprotein cross-linking domain Swol_0241 SM00937 Swol_0241 Swol_0244 SM00861 Transketolase, pyrimidine binding domain Swol_0245 SM00382 ATPases associated with a variety of cellular activities Swol_0248 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Swol_0248 SM00245 tail specific protease Swol_0249 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Swol_0251 SM00487 DEAD-like helicases superfamily Swol_0251 SM00490 helicase superfamily c-terminal domain Swol_0252 SM00382 ATPases associated with a variety of cellular activities Swol_0254 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Swol_0254 SM00465 GIY-YIG type nucleases (URI domain) Swol_0266 SM00893 Electron transfer flavoprotein domain Swol_0267 SM00893 Electron transfer flavoprotein domain Swol_0269 SM00347 helix_turn_helix multiple antibiotic resistance protein Swol_0272 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Swol_0276 SM01192 Swol_0276 Swol_0276 SM01193 Swol_0276 Swol_0279 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Swol_0280 SM00316 Ribosomal protein S1-like RNA-binding domain Swol_0280 SM00357 Cold shock protein domain Swol_0280 SM00955 Swol_0280 Swol_0283 SM00347 helix_turn_helix multiple antibiotic resistance protein Swol_0287 SM00966 SpoVT / AbrB like domain Swol_0296 SM00342 helix_turn_helix, arabinose operon control protein Swol_0302 SM00487 DEAD-like helicases superfamily Swol_0305 SM00849 Metallo-beta-lactamase superfamily Swol_0305 SM01027 Beta-Casp domain Swol_0306 SM00091 PAS domain Swol_0306 SM00382 ATPases associated with a variety of cellular activities Swol_0314 SM00382 ATPases associated with a variety of cellular activities Swol_0316 SM00062 Bacterial periplasmic substrate-binding proteins Swol_0323 SM00382 ATPases associated with a variety of cellular activities Swol_0333 SM00506 Appr-1"-p processing enzyme Swol_0334 SM00448 cheY-homologous receiver domain Swol_0336 SM00091 PAS domain Swol_0336 SM00267 diguanylate cyclase Swol_0337 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Swol_0337 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Swol_0338 SM00849 Metallo-beta-lactamase superfamily Swol_0339 SM00382 ATPases associated with a variety of cellular activities Swol_0343 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain Swol_0343 SM01080 Swol_0343 Swol_0348 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Swol_0353 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Swol_0353 SM00387 Histidine kinase-like ATPases Swol_0355 SM00448 cheY-homologous receiver domain Swol_0365 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Swol_0365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Swol_0367 SM00463 Small MutS-related domain Swol_0369 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Swol_0369 SM00292 breast cancer carboxy-terminal domain Swol_0369 SM00532 Ligase N family Swol_0374 SM00845 GatB domain Swol_0378 SM01329 Swol_0378 Swol_0381 SM00387 Histidine kinase-like ATPases Swol_0381 SM00388 His Kinase A (phosphoacceptor) domain Swol_0381 SM00448 cheY-homologous receiver domain Swol_0385 SM00422 helix_turn_helix, mercury resistance Swol_0409 SM00382 ATPases associated with a variety of cellular activities Swol_0414 SM00382 ATPases associated with a variety of cellular activities Swol_0418 SM01018 B12 binding domain Swol_0421 SM00833 Cobalamin synthesis protein cobW C-terminal domain Swol_0426 SM00382 ATPases associated with a variety of cellular activities Swol_0437 SM00382 ATPases associated with a variety of cellular activities Swol_0438 SM00849 Metallo-beta-lactamase superfamily Swol_0443 SM00729 Elongator protein 3, MiaB family, Radical SAM Swol_0444 SM00448 cheY-homologous receiver domain Swol_0444 SM00850 LytTr DNA-binding domain Swol_0445 SM00382 ATPases associated with a variety of cellular activities Swol_0446 SM00327 von Willebrand factor (vWF) type A domain Swol_0447 SM00909 Sporulation and spore germination Swol_0456 SM00091 PAS domain Swol_0456 SM00382 ATPases associated with a variety of cellular activities Swol_0460 SM01208 Swol_0460 Swol_0463 SM00382 ATPases associated with a variety of cellular activities Swol_0468 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Swol_0470 SM00732 Likely ribonuclease with RNase H fold. Swol_0472 SM01208 Swol_0472 Swol_0475 SM00487 DEAD-like helicases superfamily Swol_0483 SM00530 Helix-turn-helix XRE-family like proteins Swol_0484 SM00382 ATPases associated with a variety of cellular activities Swol_0491 SM00271 DnaJ molecular chaperone homology domain Swol_0493 SM00382 ATPases associated with a variety of cellular activities Swol_0493 SM01086 C-terminal, D2-small domain, of ClpB protein Swol_0497 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Swol_0497 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Swol_0497 SM00493 Swol_0497 Swol_0500 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain Swol_0511 SM00487 DEAD-like helicases superfamily Swol_0511 SM00490 helicase superfamily c-terminal domain Swol_0516 SM00487 DEAD-like helicases superfamily Swol_0519 SM00878 Biotin carboxylase C-terminal domain Swol_0531 SM00382 ATPases associated with a variety of cellular activities Swol_0532 SM00382 ATPases associated with a variety of cellular activities Swol_0546 SM00841 Elongation factor P, C-terminal Swol_0546 SM01185 Swol_0546 Swol_0559 SM00878 Biotin carboxylase C-terminal domain Swol_0582 SM00861 Transketolase, pyrimidine binding domain Swol_0583 SM00363 S4 RNA-binding domain Swol_0590 SM00448 cheY-homologous receiver domain Swol_0600 SM00267 diguanylate cyclase Swol_0600 SM00448 cheY-homologous receiver domain Swol_0601 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Swol_0601 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Swol_0601 SM00091 PAS domain Swol_0601 SM00387 Histidine kinase-like ATPases Swol_0601 SM00388 His Kinase A (phosphoacceptor) domain Swol_0601 SM00448 cheY-homologous receiver domain Swol_0602 SM00116 Domain in cystathionine beta-synthase and other proteins. Swol_0602 SM01131 Swol_0602 Swol_0609 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain Swol_0612 SM00936 Penicillin-binding protein 5, C-terminal domain Swol_0614 SM00387 Histidine kinase-like ATPases Swol_0617 SM00984 UDP binding domain Swol_0623 SM00831 Cation transporter/ATPase, N-terminus Swol_0633 SM00984 UDP binding domain Swol_0647 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Swol_0648 SM00411 bacterial (prokaryotic) histone like domain Swol_0657 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Swol_0662 SM00899 Swol_0662 Swol_0664 SM00382 ATPases associated with a variety of cellular activities Swol_0688 SM00729 Elongator protein 3, MiaB family, Radical SAM Swol_0690 SM01004 Delta-aminolevulinic acid dehydratase Swol_0691 SM00729 Elongator protein 3, MiaB family, Radical SAM Swol_0693 SM00344 helix_turn_helix ASNC type Swol_0695 SM00138 Methyltransferase, chemotaxis proteins Swol_0696 SM00893 Electron transfer flavoprotein domain Swol_0697 SM00893 Electron transfer flavoprotein domain Swol_0705 SM00984 UDP binding domain Swol_0759 SM01120 Swol_0759 Swol_0759 SM01121 Swol_0759 Swol_0773 SM00358 Double-stranded RNA binding motif Swol_0773 SM00535 Ribonuclease III family Swol_0774 SM00729 Elongator protein 3, MiaB family, Radical SAM Swol_0776 SM00968 SMC proteins Flexible Hinge Domain Swol_0777 SM00382 ATPases associated with a variety of cellular activities Swol_0777 SM00962 SRP54-type protein, GTPase domain Swol_0777 SM00963 SRP54-type protein, helical bundle domain Swol_0780 SM01007 Class II Aldolase and Adducin N-terminal domain Swol_0784 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Swol_0785 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Swol_0785 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Swol_0792 SM00091 PAS domain Swol_0792 SM00382 ATPases associated with a variety of cellular activities Swol_0793 SM00091 PAS domain Swol_0800 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Swol_0801 SM00852 Probable molybdopterin binding domain Swol_0802 SM00852 Probable molybdopterin binding domain Swol_0803 SM00530 Helix-turn-helix XRE-family like proteins Swol_0806 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Swol_0806 SM00954 Region found in RelA / SpoT proteins Swol_0808 SM00849 Metallo-beta-lactamase superfamily Swol_0814 SM00478 endonuclease III Swol_0814 SM00525 Swol_0814 Swol_0820 SM00740 Swol_0820 Swol_0832 SM00842 Cell division protein FtsA Swol_0833 SM00864 Tubulin/FtsZ family, GTPase domain Swol_0833 SM00865 Tubulin/FtsZ family, C-terminal domain Swol_0840 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Swol_0840 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Swol_0840 SM00493 Swol_0840 Swol_0844 SM00382 ATPases associated with a variety of cellular activities Swol_0844 SM01086 C-terminal, D2-small domain, of ClpB protein Swol_0852 SM00382 ATPases associated with a variety of cellular activities Swol_0863 SM00448 cheY-homologous receiver domain Swol_0870 SM00382 ATPases associated with a variety of cellular activities Swol_0870 SM00962 SRP54-type protein, GTPase domain Swol_0873 SM00448 cheY-homologous receiver domain Swol_0874 SM00073 Histidine Phosphotransfer domain Swol_0874 SM00260 Two component signalling adaptor domain Swol_0874 SM00387 Histidine kinase-like ATPases Swol_0874 SM01231 Swol_0874 Swol_0875 SM00260 Two component signalling adaptor domain Swol_0890 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Swol_0895 SM00481 DNA polymerase alpha chain like domain Swol_0897 SM00316 Ribosomal protein S1-like RNA-binding domain Swol_0897 SM00322 K homology RNA-binding domain Swol_0904 SM00904 Riboflavin kinase Swol_0905 SM01387 Swol_0905 Swol_0906 SM00316 Ribosomal protein S1-like RNA-binding domain Swol_0906 SM00322 K homology RNA-binding domain Swol_0909 SM00936 Penicillin-binding protein 5, C-terminal domain Swol_0916 SM00116 Domain in cystathionine beta-synthase and other proteins. Swol_0916 SM01240 Swol_0916 Swol_0919 SM00729 Elongator protein 3, MiaB family, Radical SAM Swol_0924 SM00849 Metallo-beta-lactamase superfamily Swol_0927 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Swol_0927 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Swol_0936 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Swol_0938 SM00382 ATPases associated with a variety of cellular activities Swol_0941 SM00382 ATPases associated with a variety of cellular activities Swol_0951 SM00448 cheY-homologous receiver domain Swol_0951 SM00862 Transcriptional regulatory protein, C terminal Swol_0952 SM00091 PAS domain Swol_0952 SM00387 Histidine kinase-like ATPases Swol_0952 SM00388 His Kinase A (phosphoacceptor) domain Swol_0959 SM01152 Swol_0959 Swol_0961 SM00478 endonuclease III Swol_0961 SM00525 Swol_0961 Swol_0971 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Swol_0971 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Swol_0972 SM00729 Elongator protein 3, MiaB family, Radical SAM Swol_0974 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Swol_0974 SM00534 ATPase domain of DNA mismatch repair MUTS family Swol_0977 SM00853 MutL C terminal dimerisation domain Swol_0977 SM01340 Swol_0977 Swol_0983 SM00382 ATPases associated with a variety of cellular activities Swol_1001 SM00487 DEAD-like helicases superfamily Swol_1001 SM00490 helicase superfamily c-terminal domain Swol_1007 SM01230 Swol_1007 Swol_1016 SM00729 Elongator protein 3, MiaB family, Radical SAM Swol_1017 SM00902 Iron hydrogenase small subunit Swol_1017 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Swol_1018 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Swol_1020 SM00729 Elongator protein 3, MiaB family, Radical SAM Swol_1020 SM00876 Biotin and Thiamin Synthesis associated domain Swol_1022 SM00876 Biotin and Thiamin Synthesis associated domain Swol_1024 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Swol_1026 SM00852 Probable molybdopterin binding domain Swol_1027 SM00852 Probable molybdopterin binding domain Swol_1029 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Swol_1029 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Swol_1038 SM00645 Papain family cysteine protease Swol_1040 SM00387 Histidine kinase-like ATPases Swol_1040 SM00388 His Kinase A (phosphoacceptor) domain Swol_1041 SM00448 cheY-homologous receiver domain Swol_1041 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Swol_1046 SM00382 ATPases associated with a variety of cellular activities Swol_1052 SM00909 Sporulation and spore germination Swol_1053 SM00091 PAS domain Swol_1054 SM00091 PAS domain Swol_1054 SM00387 Histidine kinase-like ATPases Swol_1054 SM00388 His Kinase A (phosphoacceptor) domain Swol_1055 SM01321 Swol_1055 Swol_1059 SM00382 ATPases associated with a variety of cellular activities Swol_1061 SM00849 Metallo-beta-lactamase superfamily Swol_1062 SM00644 Swol_1062 Swol_1067 SM00849 Metallo-beta-lactamase superfamily Swol_1070 SM00062 Bacterial periplasmic substrate-binding proteins Swol_1070 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Swol_1072 SM00382 ATPases associated with a variety of cellular activities Swol_1076 SM00635 Bacterial Ig-like domain 2 Swol_1078 SM00635 Bacterial Ig-like domain 2 Swol_1080 SM00421 helix_turn_helix, Lux Regulon Swol_1082 SM00924 MgtE intracellular N domain Swol_1089 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Swol_1093 SM00967 RNA 2'-O ribose methyltransferase substrate binding Swol_1095 SM00873 B3/4 domain Swol_1095 SM00874 tRNA synthetase B5 domain Swol_1095 SM00896 Ferredoxin-fold anticodon binding domain Swol_1097 SM00116 Domain in cystathionine beta-synthase and other proteins. Swol_1105 SM00481 DNA polymerase alpha chain like domain Swol_1105 SM00483 DNA polymerase X family Swol_1108 SM00463 Small MutS-related domain Swol_1108 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Swol_1108 SM00534 ATPase domain of DNA mismatch repair MUTS family Swol_1110 SM00363 S4 RNA-binding domain Swol_1122 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen Swol_1128 SM00996 S-adenosyl-L-homocysteine hydrolase Swol_1128 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Swol_1132 SM00487 DEAD-like helicases superfamily Swol_1132 SM00491 Swol_1132 Swol_1135 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Swol_1137 SM01092 CO dehydrogenase flavoprotein C-terminal domain Swol_1152 SM00838 Elongation factor G C-terminus Swol_1152 SM00889 Elongation factor G, domain IV Swol_1157 SM00729 Elongator protein 3, MiaB family, Radical SAM Swol_1169 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Swol_1203 SM00849 Metallo-beta-lactamase superfamily Swol_1203 SM01027 Beta-Casp domain Swol_1206 SM00344 helix_turn_helix ASNC type Swol_1214 SM00838 Elongation factor G C-terminus Swol_1214 SM00889 Elongation factor G, domain IV Swol_1225 SM00220 Serine/Threonine protein kinases, catalytic domain Swol_1225 SM00740 Swol_1225 Swol_1226 SM00331 Sigma factor PP2C-like phosphatases Swol_1226 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Swol_1233 SM00487 DEAD-like helicases superfamily Swol_1233 SM00490 helicase superfamily c-terminal domain Swol_1236 SM01409 Swol_1236 Swol_1237 SM00072 Guanylate kinase homologues. Swol_1240 SM00831 Cation transporter/ATPase, N-terminus Swol_1247 SM00257 Lysin motif Swol_1248 SM00481 DNA polymerase alpha chain like domain Swol_1254 SM00322 K homology RNA-binding domain Swol_1254 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Swol_1255 SM00382 ATPases associated with a variety of cellular activities Swol_1257 SM00852 Probable molybdopterin binding domain Swol_1258 SM00382 ATPases associated with a variety of cellular activities Swol_1262 SM00729 Elongator protein 3, MiaB family, Radical SAM Swol_1265 SM00382 ATPases associated with a variety of cellular activities Swol_1265 SM00843 Swol_1265 Swol_1268 SM00849 Metallo-beta-lactamase superfamily Swol_1269 SM01130 Swol_1269 Swol_1270 SM00859 Semialdehyde dehydrogenase, NAD binding domain Swol_1278 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family Swol_1281 SM00851 MGS-like domain Swol_1281 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Swol_1282 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain Swol_1286 SM00363 S4 RNA-binding domain Swol_1289 SM00382 ATPases associated with a variety of cellular activities Swol_1290 SM00793 Accessory gene regulator B Swol_1292 SM00849 Metallo-beta-lactamase superfamily Swol_1294 SM01078 Swol_1294 Swol_1320 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Swol_1320 SM00091 PAS domain Swol_1320 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Swol_1321 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Swol_1321 SM00091 PAS domain Swol_1321 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Swol_1324 SM01207 Swol_1324 Swol_1325 SM00382 ATPases associated with a variety of cellular activities Swol_1327 SM00448 cheY-homologous receiver domain Swol_1328 SM00091 PAS domain Swol_1328 SM00387 Histidine kinase-like ATPases Swol_1328 SM00388 His Kinase A (phosphoacceptor) domain Swol_1328 SM00448 cheY-homologous receiver domain Swol_1329 SM00448 cheY-homologous receiver domain Swol_1330 SM00138 Methyltransferase, chemotaxis proteins Swol_1331 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Swol_1332 SM00073 Histidine Phosphotransfer domain Swol_1332 SM01231 Swol_1332 Swol_1333 SM00448 cheY-homologous receiver domain Swol_1344 SM00316 Ribosomal protein S1-like RNA-binding domain Swol_1345 SM00563 Phosphate acyltransferases Swol_1358 SM01208 Swol_1358 Swol_1364 SM00871 Bacterial transcription activator, effector binding domain Swol_1367 SM00382 ATPases associated with a variety of cellular activities Swol_1370 SM01325 Swol_1370 Swol_1379 SM00365 Leucine-rich repeat, SDS22-like subfamily Swol_1379 SM00369 Leucine-rich repeats, typical (most populated) subfamily Swol_1382 SM00345 helix_turn_helix gluconate operon transcriptional repressor Swol_1383 SM00382 ATPases associated with a variety of cellular activities Swol_1390 SM00345 helix_turn_helix gluconate operon transcriptional repressor Swol_1403 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Swol_1406 SM00363 S4 RNA-binding domain Swol_1420 SM00116 Domain in cystathionine beta-synthase and other proteins. Swol_1427 SM01323 Swol_1427 Swol_1431 SM00382 ATPases associated with a variety of cellular activities Swol_1432 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Swol_1440 SM00930 Swol_1440 Swol_1442 SM01018 B12 binding domain Swol_1445 SM00382 ATPases associated with a variety of cellular activities Swol_1448 SM00448 cheY-homologous receiver domain Swol_1449 SM00448 cheY-homologous receiver domain Swol_1450 SM00260 Two component signalling adaptor domain Swol_1451 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Swol_1455 SM00073 Histidine Phosphotransfer domain Swol_1455 SM00260 Two component signalling adaptor domain Swol_1455 SM00387 Histidine kinase-like ATPases Swol_1455 SM01231 Swol_1455 Swol_1456 SM00448 cheY-homologous receiver domain Swol_1457 SM00138 Methyltransferase, chemotaxis proteins Swol_1465 SM00885 D5 N terminal like Swol_1467 SM00857 Resolvase, N terminal domain Swol_1469 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Swol_1469 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Swol_1469 SM00091 PAS domain Swol_1469 SM00267 diguanylate cyclase Swol_1472 SM00382 ATPases associated with a variety of cellular activities Swol_1480 SM00849 Metallo-beta-lactamase superfamily Swol_1481 SM00882 Coenzyme A transferase Swol_1487 SM00091 PAS domain Swol_1487 SM00116 Domain in cystathionine beta-synthase and other proteins. Swol_1487 SM00382 ATPases associated with a variety of cellular activities Swol_1489 SM00854 Bacterial capsule synthesis protein PGA_cap Swol_1498 SM00382 ATPases associated with a variety of cellular activities Swol_1498 SM00962 SRP54-type protein, GTPase domain Swol_1498 SM00963 SRP54-type protein, helical bundle domain Swol_1502 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Swol_1504 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Swol_1508 SM00400 zinc finger Swol_1508 SM00493 Swol_1508 Swol_1509 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Swol_1514 SM00116 Domain in cystathionine beta-synthase and other proteins. Swol_1515 SM00836 DALR anticodon binding domain Swol_1534 SM00849 Metallo-beta-lactamase superfamily Swol_1535 SM00529 Helix-turn-helix diphteria tox regulatory element Swol_1537 SM00899 Swol_1537 Swol_1542 SM00530 Helix-turn-helix XRE-family like proteins Swol_1543 SM00530 Helix-turn-helix XRE-family like proteins Swol_1550 SM00487 DEAD-like helicases superfamily Swol_1550 SM00490 helicase superfamily c-terminal domain Swol_1554 SM00382 ATPases associated with a variety of cellular activities Swol_1560 SM01133 Swol_1560 Swol_1565 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Swol_1574 SM00729 Elongator protein 3, MiaB family, Radical SAM Swol_1577 SM00271 DnaJ molecular chaperone homology domain Swol_1582 SM00729 Elongator protein 3, MiaB family, Radical SAM Swol_1583 SM00838 Elongation factor G C-terminus Swol_1595 SM00849 Metallo-beta-lactamase superfamily Swol_1596 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Swol_1598 SM00100 Cyclic nucleotide-monophosphate binding domain Swol_1602 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Swol_1608 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Swol_1614 SM00316 Ribosomal protein S1-like RNA-binding domain Swol_1616 SM00729 Elongator protein 3, MiaB family, Radical SAM Swol_1620 SM00382 ATPases associated with a variety of cellular activities Swol_1621 SM00345 helix_turn_helix gluconate operon transcriptional repressor Swol_1622 SM00267 diguanylate cyclase Swol_1630 SM00287 Bacterial SH3 domain homologues Swol_1631 SM00382 ATPases associated with a variety of cellular activities Swol_1645 SM00881 CoA binding domain Swol_1653 SM00382 ATPases associated with a variety of cellular activities Swol_1653 SM00464 Found in ATP-dependent protease La (LON) Swol_1654 SM00382 ATPases associated with a variety of cellular activities Swol_1655 SM00382 ATPases associated with a variety of cellular activities Swol_1655 SM00994 ClpX C4-type zinc finger Swol_1655 SM01086 C-terminal, D2-small domain, of ClpB protein Swol_1659 SM00244 prohibitin homologues Swol_1662 SM00028 Tetratricopeptide repeats Swol_1674 SM00729 Elongator protein 3, MiaB family, Radical SAM Swol_1680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Swol_1680 SM00387 Histidine kinase-like ATPases Swol_1680 SM00388 His Kinase A (phosphoacceptor) domain Swol_1681 SM00448 cheY-homologous receiver domain Swol_1681 SM00862 Transcriptional regulatory protein, C terminal Swol_1683 SM00382 ATPases associated with a variety of cellular activities Swol_1693 SM00852 Probable molybdopterin binding domain Swol_1694 SM00382 ATPases associated with a variety of cellular activities Swol_1699 SM00091 PAS domain Swol_1699 SM00382 ATPases associated with a variety of cellular activities Swol_1701 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Swol_1703 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain Swol_1710 SM00849 Metallo-beta-lactamase superfamily Swol_1715 SM00382 ATPases associated with a variety of cellular activities Swol_1716 SM00327 von Willebrand factor (vWF) type A domain Swol_1719 SM00382 ATPases associated with a variety of cellular activities Swol_1723 SM00382 ATPases associated with a variety of cellular activities Swol_1732 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Swol_1732 SM00245 tail specific protease Swol_1737 SM00382 ATPases associated with a variety of cellular activities Swol_1740 SM00382 ATPases associated with a variety of cellular activities Swol_1743 SM00564 beta-propeller repeat Swol_1760 SM00849 Metallo-beta-lactamase superfamily Swol_1763 SM01091 Transporter associated domain Swol_1772 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Swol_1774 SM01209 Swol_1774 Swol_1774 SM01210 Swol_1774 Swol_1775 SM00798 AICARFT/IMPCHase bienzyme Swol_1775 SM00851 MGS-like domain Swol_1779 SM00998 Adenylosuccinate lyase C-terminus Swol_1780 SM01001 AIR carboxylase Swol_1787 SM01230 Swol_1787 Swol_1793 SM00331 Sigma factor PP2C-like phosphatases Swol_1799 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Swol_1805 SM00487 DEAD-like helicases superfamily Swol_1805 SM00490 helicase superfamily c-terminal domain Swol_1817 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Swol_1819 SM01092 CO dehydrogenase flavoprotein C-terminal domain Swol_1826 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Swol_1827 SM00852 Probable molybdopterin binding domain Swol_1828 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Swol_1831 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Swol_1831 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Swol_1835 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain Swol_1840 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Swol_1848 SM00825 Beta-ketoacyl synthase Swol_1850 SM00822 Swol_1850 Swol_1851 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Swol_1856 SM00883 Chaperonin 10 Kd subunit Swol_1857 SM00852 Probable molybdopterin binding domain Swol_1860 SM00729 Elongator protein 3, MiaB family, Radical SAM Swol_1863 SM00244 prohibitin homologues Swol_1870 SM00986 Uracil DNA glycosylase superfamily Swol_1870 SM00987 UreE urease accessory protein, C-terminal domain Swol_1871 SM00636 Swol_1871 Swol_1874 SM01058 CarD-like/TRCF domain Swol_1875 SM00347 helix_turn_helix multiple antibiotic resistance protein Swol_1877 SM00966 SpoVT / AbrB like domain Swol_1882 SM01005 Alanine racemase, C-terminal domain Swol_1883 SM00116 Domain in cystathionine beta-synthase and other proteins. Swol_1886 SM00260 Two component signalling adaptor domain Swol_1890 SM00382 ATPases associated with a variety of cellular activities Swol_1894 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Swol_1897 SM00487 DEAD-like helicases superfamily Swol_1897 SM00490 helicase superfamily c-terminal domain Swol_1910 SM00822 Swol_1910 Swol_1918 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Swol_1918 SM00091 PAS domain Swol_1918 SM00387 Histidine kinase-like ATPases Swol_1918 SM00388 His Kinase A (phosphoacceptor) domain Swol_1926 SM00902 Iron hydrogenase small subunit Swol_1931 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Swol_1931 SM00091 PAS domain Swol_1931 SM00382 ATPases associated with a variety of cellular activities Swol_1938 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Swol_1938 SM00091 PAS domain Swol_1948 SM00382 ATPases associated with a variety of cellular activities Swol_1949 SM00382 ATPases associated with a variety of cellular activities Swol_1951 SM00382 ATPases associated with a variety of cellular activities Swol_1952 SM00382 ATPases associated with a variety of cellular activities Swol_1959 SM00900 Swol_1959 Swol_1966 SM00635 Bacterial Ig-like domain 2 Swol_1975 SM00670 Large family of predicted nucleotide-binding domains Swol_1976 SM00966 SpoVT / AbrB like domain Swol_1988 SM00635 Bacterial Ig-like domain 2 Swol_1996 SM00100 Cyclic nucleotide-monophosphate binding domain Swol_2004 SM00530 Helix-turn-helix XRE-family like proteins Swol_2010 SM00487 DEAD-like helicases superfamily Swol_2010 SM00490 helicase superfamily c-terminal domain Swol_2016 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain Swol_2016 SM01232 Swol_2016 Swol_2017 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs Swol_2017 SM00475 5'-3' exonuclease Swol_2017 SM00482 DNA polymerase A domain Swol_2023 SM00028 Tetratricopeptide repeats Swol_2027 SM00534 ATPase domain of DNA mismatch repair MUTS family Swol_2029 SM00091 PAS domain Swol_2029 SM00382 ATPases associated with a variety of cellular activities Swol_2033 SM00530 Helix-turn-helix XRE-family like proteins Swol_2038 SM00382 ATPases associated with a variety of cellular activities Swol_2043 SM00481 DNA polymerase alpha chain like domain Swol_2053 SM00091 PAS domain Swol_2053 SM00116 Domain in cystathionine beta-synthase and other proteins. Swol_2053 SM00382 ATPases associated with a variety of cellular activities Swol_2054 SM00849 Metallo-beta-lactamase superfamily Swol_2060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Swol_2060 SM00331 Sigma factor PP2C-like phosphatases Swol_2065 SM00421 helix_turn_helix, Lux Regulon Swol_2067 SM00382 ATPases associated with a variety of cellular activities Swol_2070 SM00327 von Willebrand factor (vWF) type A domain Swol_2070 SM00609 Vault protein Inter-alpha-Trypsin domain Swol_2071 SM00422 helix_turn_helix, mercury resistance Swol_2075 SM00487 DEAD-like helicases superfamily Swol_2075 SM00490 helicase superfamily c-terminal domain Swol_2085 SM00382 ATPases associated with a variety of cellular activities Swol_2087 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Swol_2092 SM00091 PAS domain Swol_2092 SM00267 diguanylate cyclase Swol_2094 SM00382 ATPases associated with a variety of cellular activities Swol_2104 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain Swol_2106 SM00091 PAS domain Swol_2106 SM00387 Histidine kinase-like ATPases Swol_2106 SM00388 His Kinase A (phosphoacceptor) domain Swol_2106 SM00448 cheY-homologous receiver domain Swol_2110 SM00382 ATPases associated with a variety of cellular activities Swol_2117 SM00834 Putative regulatory protein Swol_2121 SM00893 Electron transfer flavoprotein domain Swol_2122 SM00893 Electron transfer flavoprotein domain Swol_2127 SM00347 helix_turn_helix multiple antibiotic resistance protein Swol_2130 SM00448 cheY-homologous receiver domain Swol_2130 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Swol_2131 SM00448 cheY-homologous receiver domain Swol_2132 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Swol_2132 SM00091 PAS domain Swol_2132 SM00387 Histidine kinase-like ATPases Swol_2132 SM00388 His Kinase A (phosphoacceptor) domain Swol_2134 SM00382 ATPases associated with a variety of cellular activities Swol_2139 SM00917 LeuA allosteric (dimerisation) domain Swol_2140 SM01329 Swol_2140 Swol_2143 SM00917 LeuA allosteric (dimerisation) domain Swol_2150 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Swol_2151 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Swol_2151 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Swol_2152 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Swol_2152 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Swol_2162 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Swol_2162 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Swol_2167 SM00244 prohibitin homologues Swol_2170 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Swol_2176 SM00387 Histidine kinase-like ATPases Swol_2176 SM00388 His Kinase A (phosphoacceptor) domain Swol_2177 SM00448 cheY-homologous receiver domain Swol_2177 SM00862 Transcriptional regulatory protein, C terminal Swol_2183 SM00635 Bacterial Ig-like domain 2 Swol_2192 SM01321 Swol_2192 Swol_2198 SM01321 Swol_2198 Swol_2205 SM00382 ATPases associated with a variety of cellular activities Swol_2219 SM00382 ATPases associated with a variety of cellular activities Swol_2230 SM00382 ATPases associated with a variety of cellular activities Swol_2231 SM00382 ATPases associated with a variety of cellular activities Swol_2243 SM00382 ATPases associated with a variety of cellular activities Swol_2244 SM00345 helix_turn_helix gluconate operon transcriptional repressor Swol_2254 SM00382 ATPases associated with a variety of cellular activities Swol_2256 SM00487 DEAD-like helicases superfamily Swol_2269 SM00255 Toll - interleukin 1 - resistance Swol_2272 SM00729 Elongator protein 3, MiaB family, Radical SAM Swol_2278 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. Swol_2291 SM00859 Semialdehyde dehydrogenase, NAD binding domain Swol_2295 SM00646 Swol_2295 Swol_2296 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. Swol_2301 SM00382 ATPases associated with a variety of cellular activities Swol_2302 SM00382 ATPases associated with a variety of cellular activities Swol_2304 SM00662 RNA polymerases D Swol_2305 SM00363 S4 RNA-binding domain Swol_2305 SM01390 Swol_2305 Swol_2309 SM00316 Ribosomal protein S1-like RNA-binding domain Swol_2322 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Swol_2323 SM01374 Swol_2323 Swol_2327 SM00322 K homology RNA-binding domain Swol_2330 SM01382 Swol_2330 Swol_2330 SM01383 Swol_2330 Swol_2334 SM01403 Swol_2334 Swol_2336 SM00838 Elongation factor G C-terminus Swol_2336 SM00889 Elongation factor G, domain IV Swol_2340 SM00663 RNA polymerase I subunit A N-terminus Swol_2346 SM00649 Ribosomal protein L11/L12 Swol_2347 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Swol_2347 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Swol_2352 SM00967 RNA 2'-O ribose methyltransferase substrate binding Swol_2354 SM00535 Ribonuclease III family Swol_2362 SM00670 Large family of predicted nucleotide-binding domains Swol_2363 SM00849 Metallo-beta-lactamase superfamily Swol_2366 SM00382 ATPases associated with a variety of cellular activities Swol_2367 SM00382 ATPases associated with a variety of cellular activities Swol_2367 SM01086 C-terminal, D2-small domain, of ClpB protein Swol_2371 SM00842 Cell division protein FtsA Swol_2382 SM00382 ATPases associated with a variety of cellular activities Swol_2393 SM00226 Low molecular weight phosphatase family Swol_2397 SM00937 Swol_2397 Swol_2400 SM00448 cheY-homologous receiver domain Swol_2400 SM00850 LytTr DNA-binding domain Swol_2401 SM00387 Histidine kinase-like ATPases Swol_2402 SM00244 prohibitin homologues Swol_2404 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Swol_2406 SM00257 Lysin motif Swol_2407 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Swol_2408 SM00357 Cold shock protein domain Swol_2408 SM00382 ATPases associated with a variety of cellular activities Swol_2408 SM00959 Rho termination factor, N-terminal domain Swol_2412 SM00448 cheY-homologous receiver domain Swol_2416 SM01005 Alanine racemase, C-terminal domain Swol_2421 SM00836 DALR anticodon binding domain Swol_2421 SM01016 Arginyl tRNA synthetase N terminal dom Swol_2424 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Swol_2430 SM00382 ATPases associated with a variety of cellular activities Swol_2430 SM00930 Swol_2430 Swol_2435 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Swol_2435 SM00091 PAS domain Swol_2436 SM00902 Iron hydrogenase small subunit Swol_2436 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Swol_2440 SM00567 E-Z type HEAT repeats Swol_2441 SM00448 cheY-homologous receiver domain Swol_2443 SM00849 Metallo-beta-lactamase superfamily Swol_2447 SM00382 ATPases associated with a variety of cellular activities Swol_2448 SM00382 ATPases associated with a variety of cellular activities Swol_2452 SM00947 Carbonic anhydrase Swol_2453 SM00155 Phospholipase D. Active site motifs. Swol_2457 SM00382 ATPases associated with a variety of cellular activities Swol_2472 SM00257 Lysin motif Swol_2472 SM01208 Swol_2472 Swol_2475 SM00966 SpoVT / AbrB like domain Swol_2478 SM00382 ATPases associated with a variety of cellular activities Swol_2481 SM00382 ATPases associated with a variety of cellular activities Swol_2482 SM00481 DNA polymerase alpha chain like domain Swol_2483 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Swol_2483 SM00091 PAS domain Swol_2483 SM00267 diguanylate cyclase Swol_2483 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Swol_2500 SM00365 Leucine-rich repeat, SDS22-like subfamily Swol_2500 SM00369 Leucine-rich repeats, typical (most populated) subfamily Swol_2533 SM00788 Adenylosuccinate synthetase Swol_2534 SM00382 ATPases associated with a variety of cellular activities Swol_2546 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Swol_2546 SM00091 PAS domain Swol_2546 SM00387 Histidine kinase-like ATPases Swol_2547 SM00448 cheY-homologous receiver domain Swol_2551 SM00116 Domain in cystathionine beta-synthase and other proteins. Swol_2552 SM00382 ATPases associated with a variety of cellular activities Swol_2553 SM00382 ATPases associated with a variety of cellular activities Swol_2567 SM00470 ParB-like nuclease domain Swol_2569 SM00470 ParB-like nuclease domain Swol_2571 SM01228 Swol_2571 Swol_2573 SM00393 Putative single-stranded nucleic acids-binding domain Swol_2573 SM01245 Swol_2573 Swol_2575 SM01234 Swol_2575