locus-tag class description Pcar_0001 PF00308 Bacterial dnaA protein Pcar_0001 PF08299 Bacterial dnaA protein helix-turn-helix Pcar_0001 PF11638 DnaA N-terminal domain Pcar_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain Pcar_0002 PF02767 DNA polymerase III beta subunit, central domain Pcar_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain Pcar_0003 PF02463 RecF/RecN/SMC N terminal domain Pcar_0004 PF01751 Toprim domain Pcar_0004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_0004 PF18053 DNA gyrase B subunit insert domain Pcar_0004 PF00986 DNA gyrase B subunit, carboxyl terminus Pcar_0004 PF00204 DNA gyrase B Pcar_0005 PF03989 DNA gyrase C-terminal domain, beta-propeller Pcar_0005 PF00521 DNA gyrase/topoisomerase IV, subunit A Pcar_0007 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Pcar_0007 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Pcar_0009 PF00633 Helix-hairpin-helix motif Pcar_0009 PF00730 HhH-GPD superfamily base excision DNA repair protein Pcar_0010 PF00912 Transglycosylase Pcar_0010 PF00905 Penicillin binding protein transpeptidase domain Pcar_0010 PF17092 Penicillin-binding protein OB-like domain Pcar_0011 PF00155 Aminotransferase class I and II Pcar_0015 PF00119 ATP synthase A chain Pcar_0016 PF00137 ATP synthase subunit C Pcar_0019 PF01139 tRNA-splicing ligase RtcB Pcar_0021 PF01592 NifU-like N terminal domain Pcar_0022 PF07681 DoxX Pcar_0023 PF06733 DEAD_2 Pcar_0023 PF13307 Helicase C-terminal domain Pcar_0024 PF01370 NAD dependent epimerase/dehydratase family Pcar_0027 PF00004 ATPase family associated with various cellular activities (AAA) Pcar_0027 PF05362 Lon protease (S16) C-terminal proteolytic domain Pcar_0027 PF02190 ATP-dependent protease La (LON) substrate-binding domain Pcar_0028 PF00586 AIR synthase related protein, N-terminal domain Pcar_0028 PF02769 AIR synthase related protein, C-terminal domain Pcar_0029 PF05227 CHASE3 domain Pcar_0029 PF00672 HAMP domain Pcar_0029 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Pcar_0031 PF07194 P2 response regulator binding domain Pcar_0031 PF01627 Hpt domain Pcar_0031 PF02895 Signal transducing histidine kinase, homodimeric domain Pcar_0031 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_0031 PF01584 CheW-like domain Pcar_0032 PF03548 Outer membrane lipoprotein carrier protein LolA Pcar_0033 PF04461 Protein of unknown function (DUF520) Pcar_0034 PF04055 Radical SAM superfamily Pcar_0034 PF18693 TRAM domain Pcar_0034 PF00919 Uncharacterized protein family UPF0004 Pcar_0035 PF02424 ApbE family Pcar_0038 PF00664 ABC transporter transmembrane region Pcar_0038 PF00005 ABC transporter Pcar_0039 PF00664 ABC transporter transmembrane region Pcar_0039 PF00005 ABC transporter Pcar_0040 PF00486 Transcriptional regulatory protein, C terminal Pcar_0040 PF00072 Response regulator receiver domain Pcar_0041 PF00474 Sodium:solute symporter family Pcar_0046 PF12334 Rickettsia outer membrane protein B Pcar_0046 PF03797 Autotransporter beta-domain Pcar_0047 PF01022 Bacterial regulatory protein, arsR family Pcar_0048 PF02754 Cysteine-rich domain Pcar_0050 PF00266 Aminotransferase class-V Pcar_0051 PF04324 BFD-like [2Fe-2S] binding domain Pcar_0051 PF01106 NifU-like domain Pcar_0051 PF01592 NifU-like N terminal domain Pcar_0052 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Pcar_0052 PF00672 HAMP domain Pcar_0052 PF17200 Single Cache domain 2 Pcar_0053 PF00989 PAS fold Pcar_0053 PF00512 His Kinase A (phospho-acceptor) domain Pcar_0053 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_0053 PF00672 HAMP domain Pcar_0054 PF03633 Glycosyl hydrolase family 65, C-terminal domain Pcar_0054 PF03636 Glycosyl hydrolase family 65, N-terminal domain Pcar_0054 PF02358 Trehalose-phosphatase Pcar_0054 PF03632 Glycosyl hydrolase family 65 central catalytic domain Pcar_0056 PF00072 Response regulator receiver domain Pcar_0056 PF04397 LytTr DNA-binding domain Pcar_0057 PF03063 Prismane/CO dehydrogenase family Pcar_0058 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Pcar_0059 PF13247 4Fe-4S dicluster domain Pcar_0060 PF07992 Pyridine nucleotide-disulphide oxidoreductase Pcar_0061 PF13190 PDGLE domain Pcar_0061 PF01891 Cobalt uptake substrate-specific transmembrane region Pcar_0062 PF00999 Sodium/hydrogen exchanger family Pcar_0064 PF16325 Peptidase family U32 C-terminal domain Pcar_0064 PF01136 Peptidase family U32 Pcar_0065 PF04002 RadC-like JAB domain Pcar_0066 PF01734 Patatin-like phospholipase Pcar_0067 PF00571 CBS domain Pcar_0067 PF01769 Divalent cation transporter Pcar_0067 PF03448 MgtE intracellular N domain Pcar_0069 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Pcar_0069 PF07992 Pyridine nucleotide-disulphide oxidoreductase Pcar_0071 PF03466 LysR substrate binding domain Pcar_0071 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Pcar_0078 PF01613 Flavin reductase like domain Pcar_0080 PF08003 Protein of unknown function (DUF1698) Pcar_0081 PF13847 Methyltransferase domain Pcar_0084 PF02915 Rubrerythrin Pcar_0085 PF02080 TrkA-C domain Pcar_0085 PF02254 TrkA-N domain Pcar_0086 PF02386 Cation transport protein Pcar_0087 PF17760 UvrA interaction domain Pcar_0087 PF17755 UvrA DNA-binding domain Pcar_0088 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Pcar_0089 PF09312 SurA N-terminal domain Pcar_0089 PF00639 PPIC-type PPIASE domain Pcar_0090 PF00639 PPIC-type PPIASE domain Pcar_0091 PF02559 CarD-like/TRCF domain Pcar_0091 PF00270 DEAD/DEAH box helicase Pcar_0091 PF00271 Helicase conserved C-terminal domain Pcar_0091 PF03461 TRCF domain Pcar_0091 PF17757 UvrB interaction domain Pcar_0092 PF02445 Quinolinate synthetase A protein Pcar_0093 PF02416 mttA/Hcf106 family Pcar_0094 PF00902 Sec-independent protein translocase protein (TatC) Pcar_0095 PF00360 Phytochrome region Pcar_0095 PF00990 Diguanylate cyclase, GGDEF domain Pcar_0095 PF01590 GAF domain Pcar_0095 PF00563 EAL domain Pcar_0096 PF00005 ABC transporter Pcar_0097 PF01061 ABC-2 type transporter Pcar_0099 PF00271 Helicase conserved C-terminal domain Pcar_0099 PF04851 Type III restriction enzyme, res subunit Pcar_0099 PF02151 UvrB/uvrC motif Pcar_0099 PF12344 Ultra-violet resistance protein B Pcar_0099 PF17757 UvrB interaction domain Pcar_0100 PF01406 tRNA synthetases class I (C) catalytic domain Pcar_0100 PF09190 DALR domain Pcar_0101 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain Pcar_0101 PF00749 tRNA synthetases class I (E and Q), catalytic domain Pcar_0102 PF02542 YgbB family Pcar_0103 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Pcar_0104 PF02559 CarD-like/TRCF domain Pcar_0106 PF01556 DnaJ C terminal domain Pcar_0106 PF00226 DnaJ domain Pcar_0106 PF00684 DnaJ central domain Pcar_0107 PF00012 Hsp70 protein Pcar_0108 PF01025 GrpE Pcar_0109 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding Pcar_0109 PF01628 HrcA protein C terminal domain Pcar_0110 PF04055 Radical SAM superfamily Pcar_0110 PF06969 HemN C-terminal domain Pcar_0111 PF03600 Citrate transporter Pcar_0112 PF00795 Carbon-nitrogen hydrolase Pcar_0114 PF07992 Pyridine nucleotide-disulphide oxidoreductase Pcar_0130 PF00482 Type II secretion system (T2SS), protein F Pcar_0131 PF00437 Type II/IV secretion system protein Pcar_0131 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Pcar_0136 PF03958 Bacterial type II/III secretion system short domain Pcar_0136 PF11741 AMIN domain Pcar_0136 PF07660 Secretin and TonB N terminus short domain Pcar_0136 PF00263 Bacterial type II and III secretion system protein Pcar_0138 PF07963 Prokaryotic N-terminal methylation motif Pcar_0138 PF14245 Type IV pilin PilA Pcar_0142 PF13018 Extended Signal Peptide of Type V secretion system Pcar_0142 PF03895 YadA-like membrane anchor domain Pcar_0142 PF05658 Head domain of trimeric autotransporter adhesin Pcar_0142 PF05662 Coiled stalk of trimeric autotransporter adhesin Pcar_0144 PF15975 Flotillin Pcar_0144 PF01145 SPFH domain / Band 7 family Pcar_0148 PF01497 Periplasmic binding protein Pcar_0150 PF13649 Methyltransferase domain Pcar_0153 PF01497 Periplasmic binding protein Pcar_0154 PF01032 FecCD transport family Pcar_0155 PF00005 ABC transporter Pcar_0157 PF13847 Methyltransferase domain Pcar_0161 PF01914 MarC family integral membrane protein Pcar_0167 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family Pcar_0167 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain Pcar_0169 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Pcar_0169 PF02875 Mur ligase family, glutamate ligase domain Pcar_0169 PF08245 Mur ligase middle domain Pcar_0172 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Pcar_0175 PF13180 PDZ domain Pcar_0175 PF17820 PDZ domain Pcar_0176 PF00158 Sigma-54 interaction domain Pcar_0176 PF02954 Bacterial regulatory protein, Fis family Pcar_0176 PF01590 GAF domain Pcar_0177 PF02080 TrkA-C domain Pcar_0177 PF02254 TrkA-N domain Pcar_0178 PF00999 Sodium/hydrogen exchanger family Pcar_0181 PF00072 Response regulator receiver domain Pcar_0181 PF08448 PAS fold Pcar_0181 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_0181 PF00512 His Kinase A (phospho-acceptor) domain Pcar_0181 PF13188 PAS domain Pcar_0182 PF02677 Epoxyqueuosine reductase QueH Pcar_0183 PF01022 Bacterial regulatory protein, arsR family Pcar_0186 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) Pcar_0188 PF01103 Surface antigen Pcar_0188 PF07244 Surface antigen variable number repeat Pcar_0188 PF17243 POTRA domain TamA domain 1 Pcar_0189 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Pcar_0189 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Pcar_0189 PF00205 Thiamine pyrophosphate enzyme, central domain Pcar_0190 PF13520 Amino acid permease Pcar_0192 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Pcar_0195 PF07715 TonB-dependent Receptor Plug Domain Pcar_0195 PF00593 TonB dependent receptor Pcar_0197 PF14492 Elongation Factor G, domain II Pcar_0197 PF03764 Elongation factor G, domain IV Pcar_0197 PF00009 Elongation factor Tu GTP binding domain Pcar_0197 PF03144 Elongation factor Tu domain 2 Pcar_0197 PF00679 Elongation factor G C-terminus Pcar_0199 PF03099 Biotin/lipoate A/B protein ligase family Pcar_0199 PF12706 Beta-lactamase superfamily domain Pcar_0200 PF00883 Cytosol aminopeptidase family, catalytic domain Pcar_0200 PF02789 Cytosol aminopeptidase family, N-terminal domain Pcar_0201 PF00313 'Cold-shock' DNA-binding domain Pcar_0202 PF13393 Histidyl-tRNA synthetase Pcar_0203 PF00709 Adenylosuccinate synthetase Pcar_0204 PF00075 RNase H Pcar_0205 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Pcar_0206 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Pcar_0206 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Pcar_0206 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Pcar_0208 PF10531 SLBB domain Pcar_0208 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Pcar_0208 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Pcar_0209 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Pcar_0209 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Pcar_0209 PF00384 Molybdopterin oxidoreductase Pcar_0210 PF00146 NADH dehydrogenase Pcar_0211 PF12838 4Fe-4S dicluster domain Pcar_0212 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Pcar_0213 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Pcar_0214 PF00361 Proton-conducting membrane transporter Pcar_0214 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Pcar_0215 PF00361 Proton-conducting membrane transporter Pcar_0216 PF00361 Proton-conducting membrane transporter Pcar_0219 PF02464 Competence-damaged protein Pcar_0219 PF18146 Damage-inducible protein CinA KH domain Pcar_0219 PF00994 Probable molybdopterin binding domain Pcar_0220 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Pcar_0220 PF00111 2Fe-2S iron-sulfur cluster binding domain Pcar_0220 PF01799 [2Fe-2S] binding domain Pcar_0220 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Pcar_0221 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Pcar_0221 PF07992 Pyridine nucleotide-disulphide oxidoreductase Pcar_0223 PF01209 ubiE/COQ5 methyltransferase family Pcar_0225 PF04055 Radical SAM superfamily Pcar_0225 PF06463 Molybdenum Cofactor Synthesis C Pcar_0227 PF02625 XdhC and CoxI family Pcar_0227 PF13478 XdhC Rossmann domain Pcar_0230 PF00528 Binding-protein-dependent transport system inner membrane component Pcar_0231 PF03459 TOBE domain Pcar_0231 PF00005 ABC transporter Pcar_0234 PF00266 Aminotransferase class-V Pcar_0237 PF00462 Glutaredoxin Pcar_0238 PF02219 Methylenetetrahydrofolate reductase Pcar_0238 PF02574 Homocysteine S-methyltransferase Pcar_0240 PF00834 Ribulose-phosphate 3 epimerase family Pcar_0241 PF01189 16S rRNA methyltransferase RsmB/F Pcar_0241 PF01029 NusB family Pcar_0242 PF01435 Peptidase family M48 Pcar_0244 PF02911 Formyl transferase, C-terminal domain Pcar_0244 PF00551 Formyl transferase Pcar_0245 PF01327 Polypeptide deformylase Pcar_0246 PF02629 CoA binding domain Pcar_0246 PF00549 CoA-ligase Pcar_0247 PF08442 ATP-grasp domain Pcar_0247 PF00549 CoA-ligase Pcar_0248 PF00923 Transaldolase/Fructose-6-phosphate aldolase Pcar_0250 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Pcar_0251 PF00465 Iron-containing alcohol dehydrogenase Pcar_0252 PF00899 ThiF family Pcar_0255 PF00465 Iron-containing alcohol dehydrogenase Pcar_0256 PF03453 MoeA N-terminal region (domain I and II) Pcar_0256 PF03454 MoeA C-terminal region (domain IV) Pcar_0256 PF00994 Probable molybdopterin binding domain Pcar_0257 PF00465 Iron-containing alcohol dehydrogenase Pcar_0258 PF13188 PAS domain Pcar_0258 PF13426 PAS domain Pcar_0258 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_0258 PF00989 PAS fold Pcar_0258 PF00512 His Kinase A (phospho-acceptor) domain Pcar_0259 PF02954 Bacterial regulatory protein, Fis family Pcar_0259 PF00072 Response regulator receiver domain Pcar_0259 PF00158 Sigma-54 interaction domain Pcar_0260 PF02508 Rnf-Nqr subunit, membrane protein Pcar_0261 PF04205 FMN-binding domain Pcar_0262 PF03116 NQR2, RnfD, RnfE family Pcar_0263 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Pcar_0263 PF13375 RnfC Barrel sandwich hybrid domain Pcar_0263 PF13237 4Fe-4S dicluster domain Pcar_0263 PF10531 SLBB domain Pcar_0264 PF04060 Putative Fe-S cluster Pcar_0264 PF13187 4Fe-4S dicluster domain Pcar_0265 PF02508 Rnf-Nqr subunit, membrane protein Pcar_0266 PF00202 Aminotransferase class-III Pcar_0267 PF00005 ABC transporter Pcar_0267 PF02687 FtsX-like permease family Pcar_0267 PF12704 MacB-like periplasmic core domain Pcar_0268 PF00005 ABC transporter Pcar_0268 PF02687 FtsX-like permease family Pcar_0268 PF12704 MacB-like periplasmic core domain Pcar_0269 PF12704 MacB-like periplasmic core domain Pcar_0269 PF02687 FtsX-like permease family Pcar_0269 PF00005 ABC transporter Pcar_0270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Pcar_0271 PF13091 PLD-like domain Pcar_0272 PF01773 Na+ dependent nucleoside transporter N-terminus Pcar_0272 PF07662 Na+ dependent nucleoside transporter C-terminus Pcar_0272 PF07670 Nucleoside recognition Pcar_0273 PF04286 Protein of unknown function (DUF445) Pcar_0276 PF00132 Bacterial transferase hexapeptide (six repeats) Pcar_0276 PF00483 Nucleotidyl transferase Pcar_0277 PF01430 Hsp33 protein Pcar_0278 PF00581 Rhodanese-like domain Pcar_0286 PF08359 YsiA-like protein, C-terminal region Pcar_0286 PF00440 Bacterial regulatory proteins, tetR family Pcar_0287 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Pcar_0287 PF00529 HlyD membrane-fusion protein of T1SS Pcar_0288 PF00873 AcrB/AcrD/AcrF family Pcar_0289 PF02321 Outer membrane efflux protein Pcar_0290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_0290 PF08447 PAS fold Pcar_0290 PF08448 PAS fold Pcar_0291 PF02391 MoaE protein Pcar_0293 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Pcar_0293 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Pcar_0296 PF01230 HIT domain Pcar_0297 PF02696 Uncharacterized ACR, YdiU/UPF0061 family Pcar_0299 PF12282 Signal transduction histidine kinase Pcar_0299 PF07568 Histidine kinase Pcar_0299 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_0302 PF01027 Inhibitor of apoptosis-promoting Bax1 Pcar_0304 PF00266 Aminotransferase class-V Pcar_0308 PF04055 Radical SAM superfamily Pcar_0309 PF00248 Aldo/keto reductase family Pcar_0311 PF16998 17 kDa outer membrane surface antigen Pcar_0311 PF05433 Glycine zipper 2TM domain Pcar_0312 PF00072 Response regulator receiver domain Pcar_0312 PF00486 Transcriptional regulatory protein, C terminal Pcar_0313 PF00148 Nitrogenase component 1 type Oxidoreductase Pcar_0314 PF00148 Nitrogenase component 1 type Oxidoreductase Pcar_0315 PF04891 NifQ Pcar_0316 PF01040 UbiA prenyltransferase family Pcar_0318 PF02441 Flavoprotein Pcar_0319 PF04055 Radical SAM superfamily Pcar_0320 PF04055 Radical SAM superfamily Pcar_0321 PF00155 Aminotransferase class I and II Pcar_0322 PF00633 Helix-hairpin-helix motif Pcar_0322 PF00730 HhH-GPD superfamily base excision DNA repair protein Pcar_0322 PF14815 NUDIX domain Pcar_0323 PF01612 3'-5' exonuclease Pcar_0323 PF00570 HRDC domain Pcar_0324 PF10415 Fumarase C C-terminus Pcar_0324 PF00206 Lyase Pcar_0326 PF02403 Seryl-tRNA synthetase N-terminal domain Pcar_0326 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Pcar_0327 PF14437 MafB19-like deaminase Pcar_0328 PF03880 DbpA RNA binding domain Pcar_0328 PF00270 DEAD/DEAH box helicase Pcar_0328 PF00271 Helicase conserved C-terminal domain Pcar_0330 PF08240 Alcohol dehydrogenase GroES-like domain Pcar_0330 PF00107 Zinc-binding dehydrogenase Pcar_0334 PF02641 Uncharacterized ACR, COG1993 Pcar_0336 PF01590 GAF domain Pcar_0336 PF00158 Sigma-54 interaction domain Pcar_0336 PF02954 Bacterial regulatory protein, Fis family Pcar_0337 PF13667 ThiC-associated domain Pcar_0337 PF01964 Radical SAM ThiC family Pcar_0339 PF05690 Thiazole biosynthesis protein ThiG Pcar_0340 PF06968 Biotin and Thiamin Synthesis associated domain Pcar_0340 PF04055 Radical SAM superfamily Pcar_0341 PF01513 ATP-NAD kinase Pcar_0342 PF08543 Phosphomethylpyrimidine kinase Pcar_0342 PF02581 Thiamine monophosphate synthase Pcar_0343 PF00676 Dehydrogenase E1 component Pcar_0344 PF02779 Transketolase, pyrimidine binding domain Pcar_0344 PF02780 Transketolase, C-terminal domain Pcar_0345 PF02817 e3 binding domain Pcar_0345 PF00364 Biotin-requiring enzyme Pcar_0345 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Pcar_0346 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family Pcar_0346 PF04055 Radical SAM superfamily Pcar_0347 PF07992 Pyridine nucleotide-disulphide oxidoreductase Pcar_0347 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pcar_0349 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Pcar_0349 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pcar_0350 PF03099 Biotin/lipoate A/B protein ligase family Pcar_0351 PF00561 alpha/beta hydrolase fold Pcar_0355 PF13249 Squalene-hopene cyclase N-terminal domain Pcar_0355 PF13243 Squalene-hopene cyclase C-terminal domain Pcar_0356 PF00072 Response regulator receiver domain Pcar_0356 PF00158 Sigma-54 interaction domain Pcar_0356 PF02954 Bacterial regulatory protein, Fis family Pcar_0357 PF00011 Hsp20/alpha crystallin family Pcar_0358 PF00011 Hsp20/alpha crystallin family Pcar_0359 PF00004 ATPase family associated with various cellular activities (AAA) Pcar_0359 PF10431 C-terminal, D2-small domain, of ClpB protein Pcar_0359 PF02861 Clp amino terminal domain, pathogenicity island component Pcar_0359 PF17871 AAA lid domain Pcar_0359 PF07724 AAA domain (Cdc48 subfamily) Pcar_0360 PF00072 Response regulator receiver domain Pcar_0360 PF00486 Transcriptional regulatory protein, C terminal Pcar_0361 PF00672 HAMP domain Pcar_0361 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_0361 PF00512 His Kinase A (phospho-acceptor) domain Pcar_0365 PF13533 Biotin-lipoyl like Pcar_0366 PF12704 MacB-like periplasmic core domain Pcar_0366 PF02687 FtsX-like permease family Pcar_0366 PF00005 ABC transporter Pcar_0367 PF12704 MacB-like periplasmic core domain Pcar_0367 PF02687 FtsX-like permease family Pcar_0367 PF00005 ABC transporter Pcar_0368 PF00270 DEAD/DEAH box helicase Pcar_0368 PF00271 Helicase conserved C-terminal domain Pcar_0369 PF00011 Hsp20/alpha crystallin family Pcar_0372 PF00313 'Cold-shock' DNA-binding domain Pcar_0374 PF12169 DNA polymerase III subunits gamma and tau domain III Pcar_0375 PF02575 YbaB/EbfC DNA-binding family Pcar_0376 PF02132 RecR protein Pcar_0376 PF13662 Toprim domain Pcar_0377 PF10371 Domain of unknown function Pcar_0377 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Pcar_0377 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Pcar_0377 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Pcar_0377 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Pcar_0379 PF00025 ADP-ribosylation factor family Pcar_0380 PF05951 Bacterial protein of unknown function (DUF882) Pcar_0385 PF00263 Bacterial type II and III secretion system protein Pcar_0385 PF03958 Bacterial type II/III secretion system short domain Pcar_0386 PF13401 AAA domain Pcar_0386 PF01471 Putative peptidoglycan binding domain Pcar_0388 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Pcar_0388 PF00437 Type II/IV secretion system protein Pcar_0389 PF00482 Type II secretion system (T2SS), protein F Pcar_0391 PF07963 Prokaryotic N-terminal methylation motif Pcar_0392 PF07963 Prokaryotic N-terminal methylation motif Pcar_0397 PF14748 Pyrroline-5-carboxylate reductase dimerisation Pcar_0397 PF03807 NADP oxidoreductase coenzyme F420-dependent Pcar_0401 PF13419 Haloacid dehalogenase-like hydrolase Pcar_0402 PF00209 Sodium:neurotransmitter symporter family Pcar_0403 PF01168 Alanine racemase, N-terminal domain Pcar_0404 PF02545 Maf-like protein Pcar_0405 PF01134 Glucose inhibited division protein A Pcar_0406 PF01751 Toprim domain Pcar_0406 PF01396 Topoisomerase DNA binding C4 zinc finger Pcar_0406 PF01131 DNA topoisomerase Pcar_0408 PF17782 DprA winged helix domain Pcar_0408 PF02481 DNA recombination-mediator protein A Pcar_0410 PF13525 Outer membrane lipoprotein Pcar_0410 PF16331 TolA binding protein trimerisation Pcar_0411 PF01136 Peptidase family U32 Pcar_0411 PF16325 Peptidase family U32 C-terminal domain Pcar_0412 PF00149 Calcineurin-like phosphoesterase Pcar_0413 PF00781 Diacylglycerol kinase catalytic domain Pcar_0414 PF00293 NUDIX domain Pcar_0415 PF00293 NUDIX domain Pcar_0415 PF09297 NADH pyrophosphatase zinc ribbon domain Pcar_0416 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Pcar_0416 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Pcar_0417 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Pcar_0417 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Pcar_0417 PF01842 ACT domain Pcar_0419 PF00145 C-5 cytosine-specific DNA methylase Pcar_0422 PF00561 alpha/beta hydrolase fold Pcar_0423 PF02082 Transcriptional regulator Pcar_0429 PF07992 Pyridine nucleotide-disulphide oxidoreductase Pcar_0429 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pcar_0431 PF00005 ABC transporter Pcar_0431 PF16326 ABC transporter C-terminal domain Pcar_0431 PF12848 ABC transporter Pcar_0436 PF16925 Tetracyclin repressor-like, C-terminal domain Pcar_0436 PF00440 Bacterial regulatory proteins, tetR family Pcar_0437 PF00004 ATPase family associated with various cellular activities (AAA) Pcar_0437 PF05362 Lon protease (S16) C-terminal proteolytic domain Pcar_0437 PF02190 ATP-dependent protease La (LON) substrate-binding domain Pcar_0439 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Pcar_0439 PF00672 HAMP domain Pcar_0440 PF08359 YsiA-like protein, C-terminal region Pcar_0440 PF00440 Bacterial regulatory proteins, tetR family Pcar_0441 PF13243 Squalene-hopene cyclase C-terminal domain Pcar_0441 PF13249 Squalene-hopene cyclase N-terminal domain Pcar_0442 PF08267 Cobalamin-independent synthase, N-terminal domain Pcar_0442 PF01717 Cobalamin-independent synthase, Catalytic domain Pcar_0443 PF00909 Ammonium Transporter Family Pcar_0445 PF00890 FAD binding domain Pcar_0445 PF02910 Fumarate reductase flavoprotein C-term Pcar_0447 PF02405 Permease MlaE Pcar_0448 PF00005 ABC transporter Pcar_0450 PF04333 MlaA lipoprotein Pcar_0454 PF07715 TonB-dependent Receptor Plug Domain Pcar_0454 PF00593 TonB dependent receptor Pcar_0462 PF07726 ATPase family associated with various cellular activities (AAA) Pcar_0462 PF17863 AAA lid domain Pcar_0463 PF01032 FecCD transport family Pcar_0465 PF00005 ABC transporter Pcar_0467 PF06751 Ethanolamine ammonia lyase large subunit (EutB) Pcar_0471 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Pcar_0471 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Pcar_0473 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Pcar_0475 PF01888 CbiD Pcar_0476 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Pcar_0480 PF02570 Precorrin-8X methylmutase Pcar_0481 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Pcar_0481 PF07685 CobB/CobQ-like glutamine amidotransferase domain Pcar_0482 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Pcar_0482 PF12557 Cob(I)alamin adenosyltransferase N terminal Pcar_0483 PF03186 CobD/Cbib protein Pcar_0484 PF00155 Aminotransferase class I and II Pcar_0484 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Pcar_0484 PF07685 CobB/CobQ-like glutamine amidotransferase domain Pcar_0485 PF02654 Cobalamin-5-phosphate synthase Pcar_0486 PF02277 Phosphoribosyltransferase Pcar_0487 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase Pcar_0489 PF14824 Sirohaem biosynthesis protein central Pcar_0489 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Pcar_0489 PF10414 Sirohaem synthase dimerisation region Pcar_0491 PF06751 Ethanolamine ammonia lyase large subunit (EutB) Pcar_0494 PF04055 Radical SAM superfamily Pcar_0494 PF16199 Radical_SAM C-terminal domain Pcar_0496 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_0496 PF00512 His Kinase A (phospho-acceptor) domain Pcar_0498 PF00158 Sigma-54 interaction domain Pcar_0498 PF00072 Response regulator receiver domain Pcar_0500 PF00881 Nitroreductase family Pcar_0501 PF01425 Amidase Pcar_0505 PF00437 Type II/IV secretion system protein Pcar_0507 PF13396 Phospholipase_D-nuclease N-terminal Pcar_0507 PF13091 PLD-like domain Pcar_0512 PF00245 Alkaline phosphatase Pcar_0513 PF17151 Periplasmic sensor domain Pcar_0513 PF00990 Diguanylate cyclase, GGDEF domain Pcar_0515 PF00027 Cyclic nucleotide-binding domain Pcar_0515 PF00520 Ion transport protein Pcar_0516 PF03831 PhnA domain Pcar_0516 PF08274 PhnA Zinc-Ribbon Pcar_0521 PF09967 VWA-like domain (DUF2201) Pcar_0521 PF13203 Putative metallopeptidase domain Pcar_0524 PF01464 Transglycosylase SLT domain Pcar_0524 PF00497 Bacterial extracellular solute-binding proteins, family 3 Pcar_0530 PF02390 Putative methyltransferase Pcar_0536 PF00665 Integrase core domain Pcar_0539 PF13276 HTH-like domain Pcar_0539 PF00665 Integrase core domain Pcar_0542 PF00589 Phage integrase family Pcar_0542 PF13495 Phage integrase, N-terminal SAM-like domain Pcar_0543 PF00912 Transglycosylase Pcar_0543 PF00905 Penicillin binding protein transpeptidase domain Pcar_0543 PF06832 Penicillin-Binding Protein C-terminus Family Pcar_0544 PF00207 Alpha-2-macroglobulin family Pcar_0544 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain Pcar_0544 PF11974 Bacterial alpha-2-macroglobulin MG3 domain Pcar_0544 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain Pcar_0544 PF17962 Bacterial macroglobulin domain 6 Pcar_0544 PF01835 MG2 domain Pcar_0544 PF07703 Alpha-2-macroglobulin bait region domain Pcar_0545 PF02743 Cache domain Pcar_0545 PF00672 HAMP domain Pcar_0545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Pcar_0546 PF01584 CheW-like domain Pcar_0547 PF05736 OprF membrane domain Pcar_0547 PF00691 OmpA family Pcar_0550 PF01132 Elongation factor P (EF-P) OB domain Pcar_0550 PF09285 Elongation factor P, C-terminal Pcar_0550 PF08207 Elongation factor P (EF-P) KOW-like domain Pcar_0552 PF01184 GPR1/FUN34/yaaH family Pcar_0553 PF01541 GIY-YIG catalytic domain Pcar_0553 PF02151 UvrB/uvrC motif Pcar_0553 PF08459 UvrC Helix-hairpin-helix N-terminal Pcar_0554 PF02446 4-alpha-glucanotransferase Pcar_0556 PF02649 Type I GTP cyclohydrolase folE2 Pcar_0557 PF00871 Acetokinase family Pcar_0558 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Pcar_0561 PF01256 Carbohydrate kinase Pcar_0561 PF03853 YjeF-related protein N-terminus Pcar_0569 PF00563 EAL domain Pcar_0569 PF01590 GAF domain Pcar_0569 PF00990 Diguanylate cyclase, GGDEF domain Pcar_0569 PF00360 Phytochrome region Pcar_0570 PF00270 DEAD/DEAH box helicase Pcar_0570 PF00271 Helicase conserved C-terminal domain Pcar_0572 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Pcar_0573 PF11756 Nitrous oxide-stimulated promoter Pcar_0575 PF00180 Isocitrate/isopropylmalate dehydrogenase Pcar_0581 PF00072 Response regulator receiver domain Pcar_0581 PF00990 Diguanylate cyclase, GGDEF domain Pcar_0583 PF00009 Elongation factor Tu GTP binding domain Pcar_0583 PF03144 Elongation factor Tu domain 2 Pcar_0583 PF16658 Class II release factor RF3, C-terminal domain Pcar_0585 PF00672 HAMP domain Pcar_0585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Pcar_0586 PF00152 tRNA synthetases class II (D, K and N) Pcar_0588 PF00579 tRNA synthetases class I (W and Y) Pcar_0591 PF00004 ATPase family associated with various cellular activities (AAA) Pcar_0591 PF05362 Lon protease (S16) C-terminal proteolytic domain Pcar_0591 PF02190 ATP-dependent protease La (LON) substrate-binding domain Pcar_0592 PF01612 3'-5' exonuclease Pcar_0592 PF01367 5'-3' exonuclease, C-terminal SAM fold Pcar_0592 PF00476 DNA polymerase family A Pcar_0592 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Pcar_0596 PF00571 CBS domain Pcar_0596 PF01769 Divalent cation transporter Pcar_0596 PF03448 MgtE intracellular N domain Pcar_0597 PF02565 Recombination protein O C terminal Pcar_0597 PF11967 Recombination protein O N terminal Pcar_0598 PF02091 Glycyl-tRNA synthetase alpha subunit Pcar_0599 PF02092 Glycyl-tRNA synthetase beta subunit Pcar_0600 PF02896 PEP-utilising enzyme, TIM barrel domain Pcar_0600 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Pcar_0600 PF00391 PEP-utilising enzyme, mobile domain Pcar_0602 PF04493 Endonuclease V Pcar_0603 PF01557 Fumarylacetoacetate (FAA) hydrolase family Pcar_0604 PF03458 UPF0126 domain Pcar_0606 PF03600 Citrate transporter Pcar_0606 PF02080 TrkA-C domain Pcar_0607 PF02581 Thiamine monophosphate synthase Pcar_0608 PF04055 Radical SAM superfamily Pcar_0608 PF06968 Biotin and Thiamin Synthesis associated domain Pcar_0609 PF05690 Thiazole biosynthesis protein ThiG Pcar_0611 PF00899 ThiF family Pcar_0614 PF00793 DAHP synthetase I family Pcar_0615 PF02325 YGGT family Pcar_0617 PF02594 Uncharacterised ACR, YggU family COG1872 Pcar_0620 PF04015 Domain of unknown function (DUF362) Pcar_0621 PF01894 Uncharacterised protein family UPF0047 Pcar_0623 PF00589 Phage integrase family Pcar_0623 PF02899 Phage integrase, N-terminal SAM-like domain Pcar_0624 PF07995 Glucose / Sorbosone dehydrogenase Pcar_0629 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Pcar_0629 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Pcar_0629 PF01842 ACT domain Pcar_0631 PF02146 Sir2 family Pcar_0634 PF00990 Diguanylate cyclase, GGDEF domain Pcar_0637 PF03600 Citrate transporter Pcar_0637 PF02080 TrkA-C domain Pcar_0639 PF00939 Sodium:sulfate symporter transmembrane region Pcar_0642 PF10996 Beta-Casp domain Pcar_0642 PF00753 Metallo-beta-lactamase superfamily Pcar_0642 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Pcar_0643 PF00436 Single-strand binding protein family Pcar_0645 PF17770 Ribonuclease J C-terminal domain Pcar_0645 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Pcar_0645 PF00753 Metallo-beta-lactamase superfamily Pcar_0646 PF02673 Bacitracin resistance protein BacA Pcar_0647 PF13491 4TM region of DNA translocase FtsK/SpoIIIE Pcar_0647 PF17854 FtsK alpha domain Pcar_0647 PF09397 Ftsk gamma domain Pcar_0647 PF01580 FtsK/SpoIIIE family Pcar_0649 PF01145 SPFH domain / Band 7 family Pcar_0649 PF16200 C-terminal region of band_7 Pcar_0650 PF02618 YceG-like family Pcar_0651 PF02660 Glycerol-3-phosphate acyltransferase Pcar_0653 PF00072 Response regulator receiver domain Pcar_0653 PF00486 Transcriptional regulatory protein, C terminal Pcar_0654 PF00989 PAS fold Pcar_0654 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_0654 PF00512 His Kinase A (phospho-acceptor) domain Pcar_0654 PF16736 Single Cache-like Pcar_0655 PF12849 PBP superfamily domain Pcar_0656 PF00528 Binding-protein-dependent transport system inner membrane component Pcar_0657 PF00528 Binding-protein-dependent transport system inner membrane component Pcar_0658 PF00005 ABC transporter Pcar_0659 PF01895 PhoU domain Pcar_0662 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Pcar_0662 PF03459 TOBE domain Pcar_0663 PF00563 EAL domain Pcar_0663 PF00990 Diguanylate cyclase, GGDEF domain Pcar_0663 PF03707 Bacterial signalling protein N terminal repeat Pcar_0664 PF00072 Response regulator receiver domain Pcar_0664 PF00196 Bacterial regulatory proteins, luxR family Pcar_0665 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Pcar_0665 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Pcar_0667 PF02321 Outer membrane efflux protein Pcar_0668 PF13533 Biotin-lipoyl like Pcar_0669 PF00873 AcrB/AcrD/AcrF family Pcar_0671 PF01171 PP-loop family Pcar_0672 PF13581 Histidine kinase-like ATPase domain Pcar_0672 PF13466 STAS domain Pcar_0672 PF08448 PAS fold Pcar_0672 PF07228 Stage II sporulation protein E (SpoIIE) Pcar_0673 PF05193 Peptidase M16 inactive domain Pcar_0673 PF00675 Insulinase (Peptidase family M16) Pcar_0673 PF08367 Peptidase M16C associated Pcar_0675 PF12849 PBP superfamily domain Pcar_0677 PF03707 Bacterial signalling protein N terminal repeat Pcar_0677 PF00990 Diguanylate cyclase, GGDEF domain Pcar_0677 PF00563 EAL domain Pcar_0678 PF00175 Oxidoreductase NAD-binding domain Pcar_0678 PF00970 Oxidoreductase FAD-binding domain Pcar_0678 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Pcar_0679 PF12838 4Fe-4S dicluster domain Pcar_0680 PF00155 Aminotransferase class I and II Pcar_0681 PF00004 ATPase family associated with various cellular activities (AAA) Pcar_0681 PF17862 AAA+ lid domain Pcar_0681 PF01434 Peptidase family M41 Pcar_0682 PF03129 Anticodon binding domain Pcar_0682 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Pcar_0682 PF04073 Aminoacyl-tRNA editing domain Pcar_0684 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Pcar_0685 PF00588 SpoU rRNA Methylase family Pcar_0685 PF08032 RNA 2'-O ribose methyltransferase substrate binding Pcar_0686 PF00009 Elongation factor Tu GTP binding domain Pcar_0686 PF03144 Elongation factor Tu domain 2 Pcar_0686 PF03143 Elongation factor Tu C-terminal domain Pcar_0687 PF00471 Ribosomal protein L33 Pcar_0689 PF00467 KOW motif Pcar_0689 PF02357 Transcription termination factor nusG Pcar_0690 PF00298 Ribosomal protein L11, RNA binding domain Pcar_0690 PF03946 Ribosomal protein L11, N-terminal domain Pcar_0691 PF00687 Ribosomal protein L1p/L10e family Pcar_0692 PF00466 Ribosomal protein L10 Pcar_0693 PF00542 Ribosomal protein L7/L12 C-terminal domain Pcar_0693 PF16320 Ribosomal protein L7/L12 dimerisation domain Pcar_0694 PF04560 RNA polymerase Rpb2, domain 7 Pcar_0694 PF00562 RNA polymerase Rpb2, domain 6 Pcar_0694 PF04565 RNA polymerase Rpb2, domain 3 Pcar_0694 PF04561 RNA polymerase Rpb2, domain 2 Pcar_0694 PF04563 RNA polymerase beta subunit Pcar_0694 PF10385 RNA polymerase beta subunit external 1 domain Pcar_0695 PF00623 RNA polymerase Rpb1, domain 2 Pcar_0695 PF04983 RNA polymerase Rpb1, domain 3 Pcar_0695 PF05000 RNA polymerase Rpb1, domain 4 Pcar_0695 PF04998 RNA polymerase Rpb1, domain 5 Pcar_0695 PF04997 RNA polymerase Rpb1, domain 1 Pcar_0696 PF00164 Ribosomal protein S12/S23 Pcar_0697 PF00177 Ribosomal protein S7p/S5e Pcar_0698 PF00679 Elongation factor G C-terminus Pcar_0698 PF14492 Elongation Factor G, domain II Pcar_0698 PF00009 Elongation factor Tu GTP binding domain Pcar_0698 PF03144 Elongation factor Tu domain 2 Pcar_0698 PF03764 Elongation factor G, domain IV Pcar_0699 PF00009 Elongation factor Tu GTP binding domain Pcar_0699 PF03144 Elongation factor Tu domain 2 Pcar_0699 PF03143 Elongation factor Tu C-terminal domain Pcar_0700 PF00338 Ribosomal protein S10p/S20e Pcar_0701 PF00297 Ribosomal protein L3 Pcar_0702 PF00573 Ribosomal protein L4/L1 family Pcar_0703 PF00276 Ribosomal protein L23 Pcar_0704 PF00181 Ribosomal Proteins L2, RNA binding domain Pcar_0704 PF03947 Ribosomal Proteins L2, C-terminal domain Pcar_0705 PF00203 Ribosomal protein S19 Pcar_0706 PF00237 Ribosomal protein L22p/L17e Pcar_0707 PF00189 Ribosomal protein S3, C-terminal domain Pcar_0707 PF07650 KH domain Pcar_0708 PF00252 Ribosomal protein L16p/L10e Pcar_0709 PF00831 Ribosomal L29 protein Pcar_0710 PF00366 Ribosomal protein S17 Pcar_0711 PF00238 Ribosomal protein L14p/L23e Pcar_0712 PF00467 KOW motif Pcar_0712 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Pcar_0713 PF00281 Ribosomal protein L5 Pcar_0713 PF00673 ribosomal L5P family C-terminus Pcar_0714 PF00253 Ribosomal protein S14p/S29e Pcar_0715 PF00410 Ribosomal protein S8 Pcar_0716 PF00347 Ribosomal protein L6 Pcar_0717 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Pcar_0718 PF03719 Ribosomal protein S5, C-terminal domain Pcar_0718 PF00333 Ribosomal protein S5, N-terminal domain Pcar_0719 PF00327 Ribosomal protein L30p/L7e Pcar_0720 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Pcar_0721 PF00344 SecY translocase Pcar_0722 PF05191 Adenylate kinase, active site lid Pcar_0723 PF00557 Metallopeptidase family M24 Pcar_0724 PF00444 Ribosomal protein L36 Pcar_0725 PF00416 Ribosomal protein S13/S18 Pcar_0726 PF00411 Ribosomal protein S11 Pcar_0727 PF01479 S4 domain Pcar_0727 PF00163 Ribosomal protein S4/S9 N-terminal domain Pcar_0728 PF01000 RNA polymerase Rpb3/RpoA insert domain Pcar_0728 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Pcar_0728 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Pcar_0729 PF01196 Ribosomal protein L17 Pcar_0730 PF00425 chorismate binding enzyme Pcar_0730 PF04715 Anthranilate synthase component I, N terminal region Pcar_0731 PF00117 Glutamine amidotransferase class-I Pcar_0732 PF00591 Glycosyl transferase family, a/b domain Pcar_0732 PF02885 Glycosyl transferase family, helical bundle domain Pcar_0733 PF00218 Indole-3-glycerol phosphate synthase Pcar_0734 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Pcar_0735 PF00270 DEAD/DEAH box helicase Pcar_0735 PF00271 Helicase conserved C-terminal domain Pcar_0735 PF12300 ATP-dependent RNA helicase RhlB Pcar_0736 PF03167 Uracil DNA glycosylase superfamily Pcar_0737 PF17848 Acetyl-coA carboxylase zinc finger domain Pcar_0737 PF01039 Carboxyl transferase domain Pcar_0738 PF08245 Mur ligase middle domain Pcar_0738 PF02875 Mur ligase family, glutamate ligase domain Pcar_0739 PF04453 LPS transport system D Pcar_0739 PF03968 OstA-like protein Pcar_0741 PF04977 Septum formation initiator Pcar_0742 PF03485 Arginyl tRNA synthetase N terminal domain Pcar_0742 PF05746 DALR anticodon binding domain Pcar_0742 PF00750 tRNA synthetases class I (R) Pcar_0745 PF01883 Iron-sulfur cluster assembly protein Pcar_0745 PF10609 NUBPL iron-transfer P-loop NTPase Pcar_0748 PF10609 NUBPL iron-transfer P-loop NTPase Pcar_0751 PF00158 Sigma-54 interaction domain Pcar_0751 PF00072 Response regulator receiver domain Pcar_0751 PF02954 Bacterial regulatory protein, Fis family Pcar_0752 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Pcar_0752 PF07992 Pyridine nucleotide-disulphide oxidoreductase Pcar_0753 PF00970 Oxidoreductase FAD-binding domain Pcar_0753 PF00175 Oxidoreductase NAD-binding domain Pcar_0753 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Pcar_0757 PF01121 Dephospho-CoA kinase Pcar_0759 PF09339 IclR helix-turn-helix domain Pcar_0759 PF01614 Bacterial transcriptional regulator Pcar_0760 PF01142 tRNA pseudouridine synthase D (TruD) Pcar_0761 PF02390 Putative methyltransferase Pcar_0762 PF00793 DAHP synthetase I family Pcar_0762 PF18152 DAHP synthase ferredoxin-like domain Pcar_0763 PF00149 Calcineurin-like phosphoesterase Pcar_0763 PF10518 TAT (twin-arginine translocation) pathway signal sequence Pcar_0764 PF04851 Type III restriction enzyme, res subunit Pcar_0764 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Pcar_0764 PF18074 Primosomal protein N C-terminal domain Pcar_0764 PF17764 3′ DNA-binding domain (3′BD) Pcar_0764 PF00271 Helicase conserved C-terminal domain Pcar_0765 PF02423 Ornithine cyclodeaminase/mu-crystallin family Pcar_0766 PF00072 Response regulator receiver domain Pcar_0767 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Pcar_0767 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Pcar_0768 PF00072 Response regulator receiver domain Pcar_0768 PF00486 Transcriptional regulatory protein, C terminal Pcar_0769 PF01208 Uroporphyrinogen decarboxylase (URO-D) Pcar_0770 PF00762 Ferrochelatase Pcar_0771 PF00226 DnaJ domain Pcar_0771 PF01556 DnaJ C terminal domain Pcar_0771 PF00684 DnaJ central domain Pcar_0772 PF01593 Flavin containing amine oxidoreductase Pcar_0773 PF01926 50S ribosome-binding GTPase Pcar_0774 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Pcar_0774 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Pcar_0776 PF00528 Binding-protein-dependent transport system inner membrane component Pcar_0777 PF00005 ABC transporter Pcar_0777 PF03459 TOBE domain Pcar_0778 PF00313 'Cold-shock' DNA-binding domain Pcar_0779 PF05014 Nucleoside 2-deoxyribosyltransferase Pcar_0783 PF07690 Major Facilitator Superfamily Pcar_0784 PF01810 LysE type translocator Pcar_0791 PF01695 IstB-like ATP binding protein Pcar_0803 PF04002 RadC-like JAB domain Pcar_0805 PF00589 Phage integrase family Pcar_0805 PF02899 Phage integrase, N-terminal SAM-like domain Pcar_0810 PF00589 Phage integrase family Pcar_0810 PF02899 Phage integrase, N-terminal SAM-like domain Pcar_0811 PF00669 Bacterial flagellin N-terminal helical region Pcar_0811 PF00700 Bacterial flagellin C-terminal helical region Pcar_0812 PF00924 Mechanosensitive ion channel Pcar_0812 PF05552 Conserved TM helix Pcar_0813 PF00440 Bacterial regulatory proteins, tetR family Pcar_0814 PF02321 Outer membrane efflux protein Pcar_0815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Pcar_0816 PF00005 ABC transporter Pcar_0816 PF12704 MacB-like periplasmic core domain Pcar_0816 PF02687 FtsX-like permease family Pcar_0817 PF00005 ABC transporter Pcar_0817 PF02687 FtsX-like permease family Pcar_0817 PF12704 MacB-like periplasmic core domain Pcar_0818 PF00990 Diguanylate cyclase, GGDEF domain Pcar_0818 PF00563 EAL domain Pcar_0818 PF03707 Bacterial signalling protein N terminal repeat Pcar_0819 PF12390 Selenocysteine synthase N terminal Pcar_0819 PF03841 L-seryl-tRNA selenium transferase Pcar_0821 PF01206 Sulfurtransferase TusA Pcar_0824 PF01676 Metalloenzyme superfamily Pcar_0824 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Pcar_0826 PF12849 PBP superfamily domain Pcar_0827 PF00528 Binding-protein-dependent transport system inner membrane component Pcar_0828 PF00528 Binding-protein-dependent transport system inner membrane component Pcar_0829 PF00005 ABC transporter Pcar_0831 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Pcar_0831 PF03466 LysR substrate binding domain Pcar_0832 PF09107 Elongation factor SelB, winged helix Pcar_0832 PF09106 Elongation factor SelB, winged helix Pcar_0832 PF03144 Elongation factor Tu domain 2 Pcar_0832 PF00009 Elongation factor Tu GTP binding domain Pcar_0834 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Pcar_0834 PF00037 4Fe-4S binding domain Pcar_0834 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Pcar_0835 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Pcar_0835 PF01568 Molydopterin dinucleotide binding domain Pcar_0835 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Pcar_0835 PF12838 4Fe-4S dicluster domain Pcar_0835 PF00384 Molybdopterin oxidoreductase Pcar_0837 PF03063 Prismane/CO dehydrogenase family Pcar_0839 PF01545 Cation efflux family Pcar_0839 PF16916 Dimerisation domain of Zinc Transporter Pcar_0841 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Pcar_0846 PF02472 Biopolymer transport protein ExbD/TolR Pcar_0847 PF01618 MotA/TolQ/ExbB proton channel family Pcar_0848 PF01618 MotA/TolQ/ExbB proton channel family Pcar_0851 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Pcar_0852 PF00593 TonB dependent receptor Pcar_0852 PF07715 TonB-dependent Receptor Plug Domain Pcar_0855 PF00005 ABC transporter Pcar_0860 PF00258 Flavodoxin Pcar_0862 PF01965 DJ-1/PfpI family Pcar_0862 PF12833 Helix-turn-helix domain Pcar_0863 PF07963 Prokaryotic N-terminal methylation motif Pcar_0865 PF07963 Prokaryotic N-terminal methylation motif Pcar_0865 PF08334 Type II secretion system (T2SS), protein G Pcar_0866 PF07963 Prokaryotic N-terminal methylation motif Pcar_0866 PF08334 Type II secretion system (T2SS), protein G Pcar_0870 PF00263 Bacterial type II and III secretion system protein Pcar_0870 PF03958 Bacterial type II/III secretion system short domain Pcar_0871 PF00437 Type II/IV secretion system protein Pcar_0872 PF00437 Type II/IV secretion system protein Pcar_0873 PF00482 Type II secretion system (T2SS), protein F Pcar_0882 PF07664 Ferrous iron transport protein B C terminus Pcar_0882 PF04023 FeoA domain Pcar_0882 PF07670 Nucleoside recognition Pcar_0882 PF17910 FeoB cytosolic helical domain Pcar_0882 PF02421 Ferrous iron transport protein B Pcar_0884 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Pcar_0885 PF00535 Glycosyl transferase family 2 Pcar_0886 PF18113 Rubredoxin binding C-terminal domain Pcar_0886 PF07992 Pyridine nucleotide-disulphide oxidoreductase Pcar_0887 PF13247 4Fe-4S dicluster domain Pcar_0887 PF12800 4Fe-4S binding domain Pcar_0888 PF03063 Prismane/CO dehydrogenase family Pcar_0889 PF02082 Transcriptional regulator Pcar_0890 PF01699 Sodium/calcium exchanger protein Pcar_0891 PF01545 Cation efflux family Pcar_0892 PF02583 Metal-sensitive transcriptional repressor Pcar_0894 PF00528 Binding-protein-dependent transport system inner membrane component Pcar_0895 PF00005 ABC transporter Pcar_0895 PF08402 TOBE domain Pcar_0896 PF00690 Cation transporter/ATPase, N-terminus Pcar_0896 PF00689 Cation transporting ATPase, C-terminus Pcar_0897 PF18766 SWI2/SNF2 ATPase Pcar_0897 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) Pcar_0897 PF12008 Type I restriction and modification enzyme - subunit R C terminal Pcar_0900 PF04480 Protein of unknown function (DUF559) Pcar_0902 PF02954 Bacterial regulatory protein, Fis family Pcar_0902 PF01590 GAF domain Pcar_0902 PF00158 Sigma-54 interaction domain Pcar_0903 PF00106 short chain dehydrogenase Pcar_0904 PF01207 Dihydrouridine synthase (Dus) Pcar_0905 PF12843 Putative quorum-sensing-regulated virulence factor Pcar_0906 PF00005 ABC transporter Pcar_0906 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Pcar_0907 PF00005 ABC transporter Pcar_0907 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Pcar_0908 PF00575 S1 RNA binding domain Pcar_0908 PF16921 Tex protein YqgF-like domain Pcar_0908 PF17674 HHH domain Pcar_0908 PF09371 Tex-like protein N-terminal domain Pcar_0911 PF00990 Diguanylate cyclase, GGDEF domain Pcar_0911 PF00072 Response regulator receiver domain Pcar_0914 PF00037 4Fe-4S binding domain Pcar_0914 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Pcar_0914 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Pcar_0921 PF01810 LysE type translocator Pcar_0923 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Pcar_0924 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain Pcar_0924 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain Pcar_0925 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Pcar_0925 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Pcar_0926 PF00563 EAL domain Pcar_0926 PF00990 Diguanylate cyclase, GGDEF domain Pcar_0926 PF03707 Bacterial signalling protein N terminal repeat Pcar_0927 PF00005 ABC transporter Pcar_0928 PF00528 Binding-protein-dependent transport system inner membrane component Pcar_0932 PF00696 Amino acid kinase family Pcar_0936 PF00072 Response regulator receiver domain Pcar_0936 PF00990 Diguanylate cyclase, GGDEF domain Pcar_0937 PF02901 Pyruvate formate lyase-like Pcar_0937 PF01228 Glycine radical Pcar_0940 PF08220 DeoR-like helix-turn-helix domain Pcar_0940 PF00455 DeoR C terminal sensor domain Pcar_0941 PF00892 EamA-like transporter family Pcar_0943 PF13187 4Fe-4S dicluster domain Pcar_0943 PF04055 Radical SAM superfamily Pcar_0945 PF00430 ATP synthase B/B' CF(0) Pcar_0946 PF00213 ATP synthase delta (OSCP) subunit Pcar_0947 PF00306 ATP synthase alpha/beta chain, C terminal domain Pcar_0947 PF02874 ATP synthase alpha/beta family, beta-barrel domain Pcar_0947 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Pcar_0948 PF00231 ATP synthase Pcar_0949 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Pcar_0949 PF02874 ATP synthase alpha/beta family, beta-barrel domain Pcar_0950 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Pcar_0950 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Pcar_0951 PF00119 ATP synthase A chain Pcar_0952 PF00137 ATP synthase subunit C Pcar_0954 PF08241 Methyltransferase domain Pcar_0956 PF18019 HD domain Pcar_0956 PF00271 Helicase conserved C-terminal domain Pcar_0956 PF00270 DEAD/DEAH box helicase Pcar_0959 PF09344 CT1975-like protein Pcar_0960 PF09704 CRISPR-associated protein (Cas_Cas5) Pcar_0962 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system Pcar_0964 PF01867 CRISPR associated protein Cas1 Pcar_0965 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) Pcar_0972 PF00672 HAMP domain Pcar_0972 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Pcar_0976 PF01063 Amino-transferase class IV Pcar_0977 PF04715 Anthranilate synthase component I, N terminal region Pcar_0977 PF00425 chorismate binding enzyme Pcar_0978 PF00072 Response regulator receiver domain Pcar_0978 PF00196 Bacterial regulatory proteins, luxR family Pcar_0979 PF00672 HAMP domain Pcar_0979 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_0979 PF18698 Histidine kinase sensor domain Pcar_0979 PF00512 His Kinase A (phospho-acceptor) domain Pcar_0979 PF00989 PAS fold Pcar_0981 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Pcar_0982 PF02641 Uncharacterized ACR, COG1993 Pcar_0985 PF02586 SOS response associated peptidase (SRAP) Pcar_0986 PF01609 Transposase DDE domain Pcar_0988 PF13614 AAA domain Pcar_0989 PF04245 37-kD nucleoid-associated bacterial protein Pcar_0993 PF00860 Permease family Pcar_0995 PF01584 CheW-like domain Pcar_0996 PF01171 PP-loop family Pcar_0996 PF09179 TilS substrate binding domain Pcar_0996 PF11734 TilS substrate C-terminal domain Pcar_0997 PF00004 ATPase family associated with various cellular activities (AAA) Pcar_0997 PF01434 Peptidase family M41 Pcar_0997 PF17862 AAA+ lid domain Pcar_0997 PF06480 FtsH Extracellular Pcar_0998 PF00809 Pterin binding enzyme Pcar_0999 PF02457 DisA bacterial checkpoint controller nucleotide-binding Pcar_1000 PF07949 YbbR-like protein Pcar_1001 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Pcar_1001 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Pcar_1001 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Pcar_1001 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Pcar_1002 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ Pcar_1003 PF01648 4'-phosphopantetheinyl transferase superfamily Pcar_1004 PF00571 CBS domain Pcar_1004 PF01743 Poly A polymerase head domain Pcar_1005 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Pcar_1006 PF00696 Amino acid kinase family Pcar_1006 PF13840 ACT domain Pcar_1006 PF01842 ACT domain Pcar_1007 PF08502 LeuA allosteric (dimerisation) domain Pcar_1007 PF00682 HMGL-like Pcar_1010 PF00990 Diguanylate cyclase, GGDEF domain Pcar_1010 PF00563 EAL domain Pcar_1010 PF03707 Bacterial signalling protein N terminal repeat Pcar_1011 PF00512 His Kinase A (phospho-acceptor) domain Pcar_1011 PF18415 Histidine kinase receptor ArcB trans-membrane domain Pcar_1011 PF01627 Hpt domain Pcar_1011 PF00989 PAS fold Pcar_1011 PF00072 Response regulator receiver domain Pcar_1011 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_1015 PF02321 Outer membrane efflux protein Pcar_1017 PF00795 Carbon-nitrogen hydrolase Pcar_1018 PF04371 Porphyromonas-type peptidyl-arginine deiminase Pcar_1019 PF09335 SNARE associated Golgi protein Pcar_1020 PF05362 Lon protease (S16) C-terminal proteolytic domain Pcar_1020 PF13654 AAA domain Pcar_1021 PF00543 Nitrogen regulatory protein P-II Pcar_1022 PF00909 Ammonium Transporter Family Pcar_1027 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain Pcar_1029 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Pcar_1030 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Pcar_1030 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Pcar_1030 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Pcar_1033 PF00731 AIR carboxylase Pcar_1034 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Pcar_1034 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Pcar_1034 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Pcar_1034 PF10371 Domain of unknown function Pcar_1034 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Pcar_1037 PF00056 lactate/malate dehydrogenase, NAD binding domain Pcar_1037 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Pcar_1038 PF00180 Isocitrate/isopropylmalate dehydrogenase Pcar_1040 PF01336 OB-fold nucleic acid binding domain Pcar_1040 PF00152 tRNA synthetases class II (D, K and N) Pcar_1040 PF02938 GAD domain Pcar_1041 PF03129 Anticodon binding domain Pcar_1041 PF13393 Histidyl-tRNA synthetase Pcar_1042 PF00072 Response regulator receiver domain Pcar_1042 PF00990 Diguanylate cyclase, GGDEF domain Pcar_1045 PF01098 Cell cycle protein Pcar_1046 PF03717 Penicillin-binding Protein dimerisation domain Pcar_1046 PF00905 Penicillin binding protein transpeptidase domain Pcar_1048 PF04085 rod shape-determining protein MreC Pcar_1050 PF00639 PPIC-type PPIASE domain Pcar_1050 PF09312 SurA N-terminal domain Pcar_1051 PF01259 SAICAR synthetase Pcar_1053 PF02222 ATP-grasp domain Pcar_1055 PF00563 EAL domain Pcar_1055 PF01590 GAF domain Pcar_1055 PF00990 Diguanylate cyclase, GGDEF domain Pcar_1055 PF00360 Phytochrome region Pcar_1056 PF00072 Response regulator receiver domain Pcar_1056 PF01627 Hpt domain Pcar_1056 PF00512 His Kinase A (phospho-acceptor) domain Pcar_1056 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_1056 PF00672 HAMP domain Pcar_1056 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Pcar_1058 PF01479 S4 domain Pcar_1058 PF01728 FtsJ-like methyltransferase Pcar_1059 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Pcar_1060 PF00149 Calcineurin-like phosphoesterase Pcar_1060 PF12320 Type 5 capsule protein repressor C-terminal domain Pcar_1061 PF02463 RecF/RecN/SMC N terminal domain Pcar_1062 PF01230 HIT domain Pcar_1063 PF01258 Prokaryotic dksA/traR C4-type zinc finger Pcar_1064 PF02824 TGS domain Pcar_1064 PF13291 ACT domain Pcar_1064 PF04607 Region found in RelA / SpoT proteins Pcar_1066 PF01209 ubiE/COQ5 methyltransferase family Pcar_1068 PF17785 PUA-like domain Pcar_1068 PF10672 S-adenosylmethionine-dependent methyltransferase Pcar_1069 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Pcar_1071 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family Pcar_1071 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain Pcar_1071 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain Pcar_1074 PF00171 Aldehyde dehydrogenase family Pcar_1075 PF03734 L,D-transpeptidase catalytic domain Pcar_1077 PF03707 Bacterial signalling protein N terminal repeat Pcar_1077 PF00990 Diguanylate cyclase, GGDEF domain Pcar_1077 PF00563 EAL domain Pcar_1083 PF12833 Helix-turn-helix domain Pcar_1083 PF06719 AraC-type transcriptional regulator N-terminus Pcar_1086 PF02129 X-Pro dipeptidyl-peptidase (S15 family) Pcar_1087 PF07992 Pyridine nucleotide-disulphide oxidoreductase Pcar_1087 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Pcar_1088 PF01638 HxlR-like helix-turn-helix Pcar_1089 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Pcar_1089 PF03466 LysR substrate binding domain Pcar_1091 PF12833 Helix-turn-helix domain Pcar_1091 PF06719 AraC-type transcriptional regulator N-terminus Pcar_1095 PF00465 Iron-containing alcohol dehydrogenase Pcar_1097 PF12706 Beta-lactamase superfamily domain Pcar_1098 PF00248 Aldo/keto reductase family Pcar_1099 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Pcar_1100 PF00873 AcrB/AcrD/AcrF family Pcar_1101 PF02321 Outer membrane efflux protein Pcar_1102 PF07690 Major Facilitator Superfamily Pcar_1103 PF00004 ATPase family associated with various cellular activities (AAA) Pcar_1103 PF16193 AAA C-terminal domain Pcar_1103 PF12002 MgsA AAA+ ATPase C terminal Pcar_1104 PF03358 NADPH-dependent FMN reductase Pcar_1105 PF01312 FlhB HrpN YscU SpaS Family Pcar_1107 PF00990 Diguanylate cyclase, GGDEF domain Pcar_1107 PF00072 Response regulator receiver domain Pcar_1111 PF02561 Flagellar protein FliS Pcar_1112 PF07195 Flagellar hook-associated protein 2 C-terminus Pcar_1112 PF07196 Flagellin hook IN motif Pcar_1112 PF02465 Flagellar hook-associated protein 2 N-terminus Pcar_1113 PF03646 FlaG protein Pcar_1114 PF00700 Bacterial flagellin C-terminal helical region Pcar_1114 PF00669 Bacterial flagellin N-terminal helical region Pcar_1115 PF00700 Bacterial flagellin C-terminal helical region Pcar_1115 PF00669 Bacterial flagellin N-terminal helical region Pcar_1117 PF00551 Formyl transferase Pcar_1117 PF01370 NAD dependent epimerase/dehydratase family Pcar_1117 PF02911 Formyl transferase, C-terminal domain Pcar_1118 PF02585 GlcNAc-PI de-N-acetylase Pcar_1119 PF02142 MGS-like domain Pcar_1119 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Pcar_1119 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Pcar_1121 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Pcar_1121 PF00205 Thiamine pyrophosphate enzyme, central domain Pcar_1121 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Pcar_1122 PF00535 Glycosyl transferase family 2 Pcar_1124 PF04055 Radical SAM superfamily Pcar_1124 PF06463 Molybdenum Cofactor Synthesis C Pcar_1125 PF02310 B12 binding domain Pcar_1125 PF04055 Radical SAM superfamily Pcar_1126 PF06463 Molybdenum Cofactor Synthesis C Pcar_1126 PF04055 Radical SAM superfamily Pcar_1128 PF01370 NAD dependent epimerase/dehydratase family Pcar_1129 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Pcar_1130 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Pcar_1131 PF16363 GDP-mannose 4,6 dehydratase Pcar_1132 PF00483 Nucleotidyl transferase Pcar_1134 PF13282 Domain of unknown function (DUF4070) Pcar_1134 PF04055 Radical SAM superfamily Pcar_1134 PF02310 B12 binding domain Pcar_1137 PF02348 Cytidylyltransferase Pcar_1138 PF00248 Aldo/keto reductase family Pcar_1140 PF08666 SAF domain Pcar_1140 PF03102 NeuB family Pcar_1141 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Pcar_1142 PF02719 Polysaccharide biosynthesis protein Pcar_1146 PF02623 FliW protein Pcar_1147 PF02599 Global regulator protein family Pcar_1148 PF00700 Bacterial flagellin C-terminal helical region Pcar_1148 PF00669 Bacterial flagellin N-terminal helical region Pcar_1149 PF00460 Flagella basal body rod protein Pcar_1149 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Pcar_1153 PF02119 Flagellar P-ring protein Pcar_1154 PF02107 Flagellar L-ring protein Pcar_1156 PF00460 Flagella basal body rod protein Pcar_1156 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Pcar_1157 PF00460 Flagella basal body rod protein Pcar_1157 PF07559 Flagellar basal body protein FlaE Pcar_1157 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Pcar_1159 PF04542 Sigma-70 region 2 Pcar_1159 PF04539 Sigma-70 region 3 Pcar_1159 PF04545 Sigma-70, region 4 Pcar_1160 PF10609 NUBPL iron-transfer P-loop NTPase Pcar_1161 PF00448 SRP54-type protein, GTPase domain Pcar_1162 PF00771 FHIPEP family Pcar_1163 PF01312 FlhB HrpN YscU SpaS Family Pcar_1164 PF01311 Bacterial export proteins, family 1 Pcar_1165 PF01313 Bacterial export proteins, family 3 Pcar_1166 PF00813 FliP family Pcar_1168 PF04509 CheC-like family Pcar_1168 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Pcar_1171 PF13677 Membrane MotB of proton-channel complex MotA/MotB Pcar_1171 PF00691 OmpA family Pcar_1172 PF01618 MotA/TolQ/ExbB proton channel family Pcar_1174 PF17151 Periplasmic sensor domain Pcar_1174 PF00990 Diguanylate cyclase, GGDEF domain Pcar_1175 PF00141 Peroxidase Pcar_1177 PF00990 Diguanylate cyclase, GGDEF domain Pcar_1179 PF01966 HD domain Pcar_1181 PF13191 AAA ATPase domain Pcar_1181 PF00211 Adenylate and Guanylate cyclase catalytic domain Pcar_1183 PF07559 Flagellar basal body protein FlaE Pcar_1183 PF00460 Flagella basal body rod protein Pcar_1183 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Pcar_1185 PF13860 FlgD Ig-like domain Pcar_1185 PF03963 Flagellar hook capping protein - N-terminal region Pcar_1185 PF13861 FlgD Tudor-like domain Pcar_1189 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Pcar_1189 PF02874 ATP synthase alpha/beta family, beta-barrel domain Pcar_1189 PF18269 T3SS EscN ATPase C-terminal domain Pcar_1190 PF02108 Flagellar assembly protein FliH Pcar_1191 PF01706 FliG C-terminal domain Pcar_1191 PF14841 FliG middle domain Pcar_1191 PF14842 FliG N-terminal domain Pcar_1192 PF08345 Flagellar M-ring protein C-terminal Pcar_1192 PF01514 Secretory protein of YscJ/FliF family Pcar_1193 PF02049 Flagellar hook-basal body complex protein FliE Pcar_1194 PF00460 Flagella basal body rod protein Pcar_1194 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Pcar_1195 PF00460 Flagella basal body rod protein Pcar_1197 PF01627 Hpt domain Pcar_1197 PF01584 CheW-like domain Pcar_1197 PF09078 CheY binding Pcar_1197 PF02895 Signal transducing histidine kinase, homodimeric domain Pcar_1197 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_1198 PF01584 CheW-like domain Pcar_1199 PF03705 CheR methyltransferase, all-alpha domain Pcar_1199 PF01739 CheR methyltransferase, SAM binding domain Pcar_1200 PF00072 Response regulator receiver domain Pcar_1200 PF01339 CheB methylesterase Pcar_1201 PF03975 CheD chemotactic sensory transduction Pcar_1203 PF00072 Response regulator receiver domain Pcar_1205 PF00072 Response regulator receiver domain Pcar_1208 PF00072 Response regulator receiver domain Pcar_1208 PF00158 Sigma-54 interaction domain Pcar_1208 PF02954 Bacterial regulatory protein, Fis family Pcar_1210 PF01871 AMMECR1 Pcar_1211 PF00009 Elongation factor Tu GTP binding domain Pcar_1211 PF03144 Elongation factor Tu domain 2 Pcar_1211 PF00679 Elongation factor G C-terminus Pcar_1212 PF01435 Peptidase family M48 Pcar_1214 PF04055 Radical SAM superfamily Pcar_1214 PF01938 TRAM domain Pcar_1214 PF00919 Uncharacterized protein family UPF0004 Pcar_1215 PF07733 Bacterial DNA polymerase III alpha NTPase domain Pcar_1215 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Pcar_1215 PF14579 Helix-hairpin-helix motif Pcar_1215 PF02811 PHP domain Pcar_1216 PF05343 M42 glutamyl aminopeptidase Pcar_1217 PF00571 CBS domain Pcar_1217 PF00478 IMP dehydrogenase / GMP reductase domain Pcar_1218 PF00117 Glutamine amidotransferase class-I Pcar_1218 PF00958 GMP synthase C terminal domain Pcar_1218 PF02540 NAD synthase Pcar_1221 PF02545 Maf-like protein Pcar_1222 PF14579 Helix-hairpin-helix motif Pcar_1222 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Pcar_1222 PF01336 OB-fold nucleic acid binding domain Pcar_1222 PF02811 PHP domain Pcar_1222 PF07733 Bacterial DNA polymerase III alpha NTPase domain Pcar_1223 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Pcar_1224 PF03330 Lytic transglycolase Pcar_1224 PF05036 Sporulation related domain Pcar_1225 PF00990 Diguanylate cyclase, GGDEF domain Pcar_1225 PF13188 PAS domain Pcar_1225 PF03707 Bacterial signalling protein N terminal repeat Pcar_1225 PF00563 EAL domain Pcar_1226 PF02595 Glycerate kinase family Pcar_1228 PF01702 Queuine tRNA-ribosyltransferase Pcar_1229 PF17862 AAA+ lid domain Pcar_1229 PF00004 ATPase family associated with various cellular activities (AAA) Pcar_1229 PF01434 Peptidase family M41 Pcar_1230 PF00113 Enolase, C-terminal TIM barrel domain Pcar_1230 PF03952 Enolase, N-terminal domain Pcar_1231 PF02562 PhoH-like protein Pcar_1232 PF07698 7TM receptor with intracellular HD hydrolase Pcar_1232 PF07697 7TM-HD extracellular Pcar_1232 PF01966 HD domain Pcar_1233 PF02130 Uncharacterized protein family UPF0054 Pcar_1234 PF01219 Prokaryotic diacylglycerol kinase Pcar_1235 PF00571 CBS domain Pcar_1235 PF03471 Transporter associated domain Pcar_1236 PF00795 Carbon-nitrogen hydrolase Pcar_1237 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Pcar_1237 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Pcar_1238 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Pcar_1239 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Pcar_1239 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Pcar_1241 PF13193 AMP-binding enzyme C-terminal domain Pcar_1241 PF00501 AMP-binding enzyme Pcar_1242 PF00501 AMP-binding enzyme Pcar_1242 PF13193 AMP-binding enzyme C-terminal domain Pcar_1244 PF00291 Pyridoxal-phosphate dependent enzyme Pcar_1245 PF00892 EamA-like transporter family Pcar_1246 PF00171 Aldehyde dehydrogenase family Pcar_1246 PF00465 Iron-containing alcohol dehydrogenase Pcar_1248 PF00152 tRNA synthetases class II (D, K and N) Pcar_1248 PF01336 OB-fold nucleic acid binding domain Pcar_1249 PF12704 MacB-like periplasmic core domain Pcar_1249 PF02687 FtsX-like permease family Pcar_1250 PF00005 ABC transporter Pcar_1251 PF07244 Surface antigen variable number repeat Pcar_1251 PF01103 Surface antigen Pcar_1253 PF00132 Bacterial transferase hexapeptide (six repeats) Pcar_1253 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Pcar_1254 PF07977 FabA-like domain Pcar_1255 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Pcar_1255 PF00132 Bacterial transferase hexapeptide (six repeats) Pcar_1256 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Pcar_1256 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Pcar_1257 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Pcar_1258 PF02684 Lipid-A-disaccharide synthetase Pcar_1259 PF00005 ABC transporter Pcar_1259 PF00664 ABC transporter transmembrane region Pcar_1260 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Pcar_1261 PF02606 Tetraacyldisaccharide-1-P 4'-kinase Pcar_1262 PF03966 Trm112p-like protein Pcar_1263 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Pcar_1264 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Pcar_1267 PF00535 Glycosyl transferase family 2 Pcar_1270 PF13580 SIS domain Pcar_1271 PF00535 Glycosyl transferase family 2 Pcar_1273 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase Pcar_1274 PF13439 Glycosyltransferase Family 4 Pcar_1274 PF00534 Glycosyl transferases group 1 Pcar_1277 PF03102 NeuB family Pcar_1277 PF08666 SAF domain Pcar_1279 PF01050 Mannose-6-phosphate isomerase Pcar_1279 PF00483 Nucleotidyl transferase Pcar_1282 PF01467 Cytidylyltransferase-like Pcar_1282 PF00294 pfkB family carbohydrate kinase Pcar_1283 PF08645 Polynucleotide kinase 3 phosphatase Pcar_1284 PF03755 YicC-like family, N-terminal region Pcar_1284 PF08340 Domain of unknown function (DUF1732) Pcar_1285 PF00625 Guanylate kinase Pcar_1286 PF01192 RNA polymerase Rpb6 Pcar_1287 PF02824 TGS domain Pcar_1287 PF04607 Region found in RelA / SpoT proteins Pcar_1287 PF13291 ACT domain Pcar_1288 PF01042 Endoribonuclease L-PSP Pcar_1289 PF00830 Ribosomal L28 family Pcar_1292 PF00551 Formyl transferase Pcar_1293 PF00586 AIR synthase related protein, N-terminal domain Pcar_1293 PF02769 AIR synthase related protein, C-terminal domain Pcar_1294 PF00583 Acetyltransferase (GNAT) family Pcar_1295 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Pcar_1295 PF00175 Oxidoreductase NAD-binding domain Pcar_1296 PF01180 Dihydroorotate dehydrogenase Pcar_1297 PF00571 CBS domain Pcar_1297 PF01368 DHH family Pcar_1297 PF12627 Probable RNA and SrmB- binding site of polymerase A Pcar_1297 PF02272 DHHA1 domain Pcar_1297 PF01743 Poly A polymerase head domain Pcar_1298 PF02163 Peptidase family M50 Pcar_1299 PF02616 Segregation and condensation protein ScpA Pcar_1300 PF04079 Segregation and condensation complex subunit ScpB Pcar_1301 PF00849 RNA pseudouridylate synthase Pcar_1301 PF01479 S4 domain Pcar_1303 PF13401 AAA domain Pcar_1303 PF01471 Putative peptidoglycan binding domain Pcar_1304 PF01119 DNA mismatch repair protein, C-terminal domain Pcar_1304 PF08676 MutL C terminal dimerisation domain Pcar_1306 PF17209 Hfq protein Pcar_1307 PF01066 CDP-alcohol phosphatidyltransferase Pcar_1311 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Pcar_1311 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Pcar_1311 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Pcar_1311 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Pcar_1316 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Pcar_1318 PF00933 Glycosyl hydrolase family 3 N terminal domain Pcar_1318 PF01915 Glycosyl hydrolase family 3 C-terminal domain Pcar_1320 PF00501 AMP-binding enzyme Pcar_1320 PF14535 AMP-binding enzyme C-terminal domain Pcar_1321 PF01464 Transglycosylase SLT domain Pcar_1322 PF02910 Fumarate reductase flavoprotein C-term Pcar_1322 PF00890 FAD binding domain Pcar_1325 PF00156 Phosphoribosyl transferase domain Pcar_1326 PF00156 Phosphoribosyl transferase domain Pcar_1328 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Pcar_1328 PF00586 AIR synthase related protein, N-terminal domain Pcar_1328 PF02769 AIR synthase related protein, C-terminal domain Pcar_1329 PF00753 Metallo-beta-lactamase superfamily Pcar_1331 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Pcar_1331 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Pcar_1332 PF00162 Phosphoglycerate kinase Pcar_1333 PF00121 Triosephosphate isomerase Pcar_1335 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Pcar_1336 PF00672 HAMP domain Pcar_1336 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Pcar_1336 PF02203 Tar ligand binding domain homologue Pcar_1338 PF06865 Pyrimidine/purine nucleoside phosphorylase Pcar_1342 PF00571 CBS domain Pcar_1342 PF00478 IMP dehydrogenase / GMP reductase domain Pcar_1343 PF00563 EAL domain Pcar_1343 PF00990 Diguanylate cyclase, GGDEF domain Pcar_1343 PF03707 Bacterial signalling protein N terminal repeat Pcar_1346 PF03851 UV-endonuclease UvdE Pcar_1351 PF00665 Integrase core domain Pcar_1354 PF00690 Cation transporter/ATPase, N-terminus Pcar_1354 PF00689 Cation transporting ATPase, C-terminus Pcar_1355 PF02203 Tar ligand binding domain homologue Pcar_1355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Pcar_1355 PF00672 HAMP domain Pcar_1356 PF00107 Zinc-binding dehydrogenase Pcar_1360 PF01565 FAD binding domain Pcar_1360 PF08031 Berberine and berberine like Pcar_1361 PF12848 ABC transporter Pcar_1361 PF00005 ABC transporter Pcar_1363 PF03710 Glutamate-ammonia ligase adenylyltransferase Pcar_1363 PF08335 GlnD PII-uridylyltransferase Pcar_1371 PF00877 NlpC/P60 family Pcar_1372 PF00672 HAMP domain Pcar_1372 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Pcar_1372 PF12729 Four helix bundle sensory module for signal transduction Pcar_1373 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Pcar_1375 PF13476 AAA domain Pcar_1376 PF01266 FAD dependent oxidoreductase Pcar_1377 PF13495 Phage integrase, N-terminal SAM-like domain Pcar_1377 PF00589 Phage integrase family Pcar_1381 PF00665 Integrase core domain Pcar_1388 PF13419 Haloacid dehalogenase-like hydrolase Pcar_1390 PF06965 Na+/H+ antiporter 1 Pcar_1391 PF01161 Phosphatidylethanolamine-binding protein Pcar_1393 PF01435 Peptidase family M48 Pcar_1393 PF16491 CAAX prenyl protease N-terminal, five membrane helices Pcar_1394 PF06463 Molybdenum Cofactor Synthesis C Pcar_1394 PF04055 Radical SAM superfamily Pcar_1396 PF04055 Radical SAM superfamily Pcar_1397 PF01228 Glycine radical Pcar_1397 PF02901 Pyruvate formate lyase-like Pcar_1399 PF00672 HAMP domain Pcar_1399 PF18698 Histidine kinase sensor domain Pcar_1399 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_1399 PF00989 PAS fold Pcar_1399 PF00512 His Kinase A (phospho-acceptor) domain Pcar_1400 PF00072 Response regulator receiver domain Pcar_1400 PF00196 Bacterial regulatory proteins, luxR family Pcar_1401 PF12544 Lysine-2,3-aminomutase Pcar_1401 PF04055 Radical SAM superfamily Pcar_1403 PF14622 Ribonuclease-III-like Pcar_1403 PF00035 Double-stranded RNA binding motif Pcar_1405 PF07650 KH domain Pcar_1405 PF01926 50S ribosome-binding GTPase Pcar_1406 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Pcar_1406 PF01926 50S ribosome-binding GTPase Pcar_1408 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_1408 PF01627 Hpt domain Pcar_1408 PF02895 Signal transducing histidine kinase, homodimeric domain Pcar_1408 PF01584 CheW-like domain Pcar_1408 PF07194 P2 response regulator binding domain Pcar_1409 PF00072 Response regulator receiver domain Pcar_1409 PF00486 Transcriptional regulatory protein, C terminal Pcar_1411 PF00072 Response regulator receiver domain Pcar_1412 PF01176 Translation initiation factor 1A / IF-1 Pcar_1413 PF13603 Leucyl-tRNA synthetase, Domain 2 Pcar_1413 PF00133 tRNA synthetases class I (I, L, M and V) Pcar_1413 PF09334 tRNA synthetases class I (M) Pcar_1413 PF08264 Anticodon-binding domain of tRNA Pcar_1416 PF01649 Ribosomal protein S20 Pcar_1417 PF03023 Lipid II flippase MurJ Pcar_1418 PF03129 Anticodon binding domain Pcar_1418 PF02824 TGS domain Pcar_1418 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Pcar_1418 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Pcar_1419 PF05198 Translation initiation factor IF-3, N-terminal domain Pcar_1419 PF00707 Translation initiation factor IF-3, C-terminal domain Pcar_1420 PF01632 Ribosomal protein L35 Pcar_1421 PF00453 Ribosomal protein L20 Pcar_1422 PF01409 tRNA synthetases class II core domain (F) Pcar_1422 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Pcar_1423 PF03147 Ferredoxin-fold anticodon binding domain Pcar_1423 PF01588 Putative tRNA binding domain Pcar_1423 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Pcar_1423 PF03484 tRNA synthetase B5 domain Pcar_1423 PF03483 B3/4 domain Pcar_1424 PF00216 Bacterial DNA-binding protein Pcar_1425 PF13411 MerR HTH family regulatory protein Pcar_1426 PF01975 Survival protein SurE Pcar_1428 PF09335 SNARE associated Golgi protein Pcar_1429 PF01476 LysM domain Pcar_1429 PF01551 Peptidase family M23 Pcar_1430 PF04539 Sigma-70 region 3 Pcar_1430 PF04542 Sigma-70 region 2 Pcar_1430 PF00140 Sigma-70 factor, region 1.2 Pcar_1430 PF03979 Sigma-70 factor, region 1.1 Pcar_1430 PF04545 Sigma-70, region 4 Pcar_1431 PF00156 Phosphoribosyl transferase domain Pcar_1432 PF03819 MazG nucleotide pyrophosphohydrolase domain Pcar_1434 PF01783 Ribosomal L32p protein family Pcar_1435 PF02504 Fatty acid synthesis protein Pcar_1436 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Pcar_1436 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Pcar_1437 PF00698 Acyl transferase domain Pcar_1439 PF00550 Phosphopantetheine attachment site Pcar_1440 PF00109 Beta-ketoacyl synthase, N-terminal domain Pcar_1440 PF02801 Beta-ketoacyl synthase, C-terminal domain Pcar_1441 PF02502 Ribose/Galactose Isomerase Pcar_1442 PF00464 Serine hydroxymethyltransferase Pcar_1443 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Pcar_1444 PF03477 ATP cone domain Pcar_1445 PF01872 RibD C-terminal domain Pcar_1445 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Pcar_1446 PF00677 Lumazine binding domain Pcar_1447 PF00925 GTP cyclohydrolase II Pcar_1447 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Pcar_1448 PF00885 6,7-dimethyl-8-ribityllumazine synthase Pcar_1449 PF01029 NusB family Pcar_1451 PF03447 Homoserine dehydrogenase, NAD binding domain Pcar_1451 PF00742 Homoserine dehydrogenase Pcar_1451 PF01842 ACT domain Pcar_1452 PF00588 SpoU rRNA Methylase family Pcar_1453 PF01053 Cys/Met metabolism PLP-dependent enzyme Pcar_1454 PF05670 NFACT protein RNA binding domain Pcar_1455 PF00216 Bacterial DNA-binding protein Pcar_1456 PF07883 Cupin domain Pcar_1458 PF06968 Biotin and Thiamin Synthesis associated domain Pcar_1458 PF04055 Radical SAM superfamily Pcar_1460 PF00202 Aminotransferase class-III Pcar_1461 PF00857 Isochorismatase family Pcar_1462 PF00535 Glycosyl transferase family 2 Pcar_1464 PF02706 Chain length determinant protein Pcar_1464 PF13614 AAA domain Pcar_1464 PF13807 G-rich domain on putative tyrosine kinase Pcar_1466 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Pcar_1466 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Pcar_1466 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Pcar_1467 PF01370 NAD dependent epimerase/dehydratase family Pcar_1469 PF12627 Probable RNA and SrmB- binding site of polymerase A Pcar_1469 PF01966 HD domain Pcar_1469 PF01743 Poly A polymerase head domain Pcar_1471 PF18267 Rubredoxin NAD+ reductase C-terminal domain Pcar_1471 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Pcar_1471 PF07992 Pyridine nucleotide-disulphide oxidoreductase Pcar_1471 PF04324 BFD-like [2Fe-2S] binding domain Pcar_1471 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Pcar_1475 PF01476 LysM domain Pcar_1475 PF08525 Opacity-associated protein A N-terminal motif Pcar_1475 PF01551 Peptidase family M23 Pcar_1477 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Pcar_1480 PF01253 Translation initiation factor SUI1 Pcar_1482 PF01493 GXGXG motif Pcar_1482 PF01645 Conserved region in glutamate synthase Pcar_1482 PF04898 Glutamate synthase central domain Pcar_1482 PF00310 Glutamine amidotransferases class-II Pcar_1483 PF13247 4Fe-4S dicluster domain Pcar_1483 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Pcar_1483 PF07992 Pyridine nucleotide-disulphide oxidoreductase Pcar_1486 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pcar_1486 PF07992 Pyridine nucleotide-disulphide oxidoreductase Pcar_1487 PF13194 Domain of unknown function (DUF4010) Pcar_1488 PF00753 Metallo-beta-lactamase superfamily Pcar_1488 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Pcar_1488 PF10996 Beta-Casp domain Pcar_1489 PF00953 Glycosyl transferase family 4 Pcar_1491 PF00027 Cyclic nucleotide-binding domain Pcar_1491 PF13545 Crp-like helix-turn-helix domain Pcar_1495 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Pcar_1495 PF00132 Bacterial transferase hexapeptide (six repeats) Pcar_1496 PF00171 Aldehyde dehydrogenase family Pcar_1497 PF02606 Tetraacyldisaccharide-1-P 4'-kinase Pcar_1499 PF00293 NUDIX domain Pcar_1500 PF00543 Nitrogen regulatory protein P-II Pcar_1501 PF03951 Glutamine synthetase, beta-Grasp domain Pcar_1501 PF00120 Glutamine synthetase, catalytic domain Pcar_1502 PF00291 Pyridoxal-phosphate dependent enzyme Pcar_1502 PF14821 Threonine synthase N terminus Pcar_1504 PF01230 HIT domain Pcar_1505 PF01618 MotA/TolQ/ExbB proton channel family Pcar_1506 PF02472 Biopolymer transport protein ExbD/TolR Pcar_1507 PF00480 ROK family Pcar_1508 PF00365 Phosphofructokinase Pcar_1509 PF01545 Cation efflux family Pcar_1509 PF16916 Dimerisation domain of Zinc Transporter Pcar_1510 PF01624 MutS domain I Pcar_1510 PF05188 MutS domain II Pcar_1510 PF05192 MutS domain III Pcar_1510 PF05190 MutS family domain IV Pcar_1510 PF00488 MutS domain V Pcar_1511 PF01520 N-acetylmuramoyl-L-alanine amidase Pcar_1511 PF11741 AMIN domain Pcar_1512 PF01966 HD domain Pcar_1512 PF01909 Nucleotidyltransferase domain Pcar_1512 PF08335 GlnD PII-uridylyltransferase Pcar_1513 PF02899 Phage integrase, N-terminal SAM-like domain Pcar_1513 PF00589 Phage integrase family Pcar_1514 PF01676 Metalloenzyme superfamily Pcar_1514 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Pcar_1519 PF02397 Bacterial sugar transferase Pcar_1520 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Pcar_1520 PF02142 MGS-like domain Pcar_1520 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Pcar_1521 PF12850 Calcineurin-like phosphoesterase superfamily domain Pcar_1522 PF00534 Glycosyl transferases group 1 Pcar_1524 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Pcar_1526 PF00534 Glycosyl transferases group 1 Pcar_1527 PF00534 Glycosyl transferases group 1 Pcar_1529 PF02397 Bacterial sugar transferase Pcar_1530 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Pcar_1533 PF02397 Bacterial sugar transferase Pcar_1534 PF00291 Pyridoxal-phosphate dependent enzyme Pcar_1536 PF02719 Polysaccharide biosynthesis protein Pcar_1538 PF02563 Polysaccharide biosynthesis/export protein Pcar_1538 PF10531 SLBB domain Pcar_1539 PF13614 AAA domain Pcar_1542 PF00365 Phosphofructokinase Pcar_1545 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Pcar_1545 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Pcar_1545 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Pcar_1549 PF04452 RNA methyltransferase Pcar_1551 PF01938 TRAM domain Pcar_1551 PF05958 tRNA (Uracil-5-)-methyltransferase Pcar_1552 PF02576 RimP N-terminal domain Pcar_1552 PF17384 RimP C-terminal SH3 domain Pcar_1553 PF13184 NusA-like KH domain Pcar_1553 PF08529 NusA N-terminal domain Pcar_1553 PF00575 S1 RNA binding domain Pcar_1554 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Pcar_1555 PF00009 Elongation factor Tu GTP binding domain Pcar_1555 PF04760 Translation initiation factor IF-2, N-terminal region Pcar_1555 PF11987 Translation-initiation factor 2 Pcar_1557 PF02033 Ribosome-binding factor A Pcar_1558 PF02272 DHHA1 domain Pcar_1558 PF01368 DHH family Pcar_1559 PF16198 tRNA pseudouridylate synthase B C-terminal domain Pcar_1559 PF01509 TruB family pseudouridylate synthase (N terminal domain) Pcar_1560 PF00312 Ribosomal protein S15 Pcar_1561 PF00013 KH domain Pcar_1561 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Pcar_1561 PF01138 3' exoribonuclease family, domain 1 Pcar_1561 PF03725 3' exoribonuclease family, domain 2 Pcar_1561 PF00575 S1 RNA binding domain Pcar_1562 PF00675 Insulinase (Peptidase family M16) Pcar_1562 PF05193 Peptidase M16 inactive domain Pcar_1563 PF00692 dUTPase Pcar_1564 PF01300 Telomere recombination Pcar_1565 PF02690 Na+/Pi-cotransporter Pcar_1566 PF02541 Ppx/GppA phosphatase family Pcar_1569 PF00501 AMP-binding enzyme Pcar_1569 PF14535 AMP-binding enzyme C-terminal domain Pcar_1573 PF00155 Aminotransferase class I and II Pcar_1575 PF00005 ABC transporter Pcar_1579 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pcar_1579 PF07992 Pyridine nucleotide-disulphide oxidoreductase Pcar_1580 PF00072 Response regulator receiver domain Pcar_1580 PF02954 Bacterial regulatory protein, Fis family Pcar_1580 PF00158 Sigma-54 interaction domain Pcar_1585 PF10609 NUBPL iron-transfer P-loop NTPase Pcar_1586 PF01018 GTP1/OBG Pcar_1586 PF01926 50S ribosome-binding GTPase Pcar_1586 PF04055 Radical SAM superfamily Pcar_1587 PF13649 Methyltransferase domain Pcar_1589 PF17770 Ribonuclease J C-terminal domain Pcar_1589 PF00753 Metallo-beta-lactamase superfamily Pcar_1589 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Pcar_1590 PF01883 Iron-sulfur cluster assembly protein Pcar_1590 PF10609 NUBPL iron-transfer P-loop NTPase Pcar_1593 PF02629 CoA binding domain Pcar_1593 PF06971 Putative DNA-binding protein N-terminus Pcar_1594 PF00465 Iron-containing alcohol dehydrogenase Pcar_1595 PF00376 MerR family regulatory protein Pcar_1595 PF09278 MerR, DNA binding Pcar_1596 PF00403 Heavy-metal-associated domain Pcar_1597 PF03466 LysR substrate binding domain Pcar_1597 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Pcar_1598 PF03601 Conserved hypothetical protein 698 Pcar_1599 PF00155 Aminotransferase class I and II Pcar_1599 PF00392 Bacterial regulatory proteins, gntR family Pcar_1604 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Pcar_1604 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Pcar_1604 PF00037 4Fe-4S binding domain Pcar_1605 PF02906 Iron only hydrogenase large subunit, C-terminal domain Pcar_1605 PF02256 Iron hydrogenase small subunit Pcar_1605 PF00037 4Fe-4S binding domain Pcar_1605 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Pcar_1607 PF04055 Radical SAM superfamily Pcar_1607 PF06968 Biotin and Thiamin Synthesis associated domain Pcar_1609 PF00270 DEAD/DEAH box helicase Pcar_1609 PF00271 Helicase conserved C-terminal domain Pcar_1609 PF17191 RecG wedge domain Pcar_1611 PF01272 Transcription elongation factor, GreA/GreB, C-term Pcar_1611 PF03449 Transcription elongation factor, N-terminal Pcar_1612 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Pcar_1612 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Pcar_1612 PF02142 MGS-like domain Pcar_1613 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Pcar_1613 PF00117 Glutamine amidotransferase class-I Pcar_1614 PF01979 Amidohydrolase family Pcar_1615 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Pcar_1615 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Pcar_1616 PF00156 Phosphoribosyl transferase domain Pcar_1617 PF10502 Signal peptidase, peptidase S26 Pcar_1618 PF03144 Elongation factor Tu domain 2 Pcar_1618 PF06421 GTP-binding protein LepA C-terminus Pcar_1618 PF00009 Elongation factor Tu GTP binding domain Pcar_1618 PF00679 Elongation factor G C-terminus Pcar_1619 PF00501 AMP-binding enzyme Pcar_1620 PF00654 Voltage gated chloride channel Pcar_1623 PF02646 RmuC family Pcar_1624 PF00881 Nitroreductase family Pcar_1629 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Pcar_1629 PF01926 50S ribosome-binding GTPase Pcar_1630 PF00206 Lyase Pcar_1630 PF10415 Fumarase C C-terminus Pcar_1632 PF06968 Biotin and Thiamin Synthesis associated domain Pcar_1632 PF04055 Radical SAM superfamily Pcar_1633 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Pcar_1633 PF00037 4Fe-4S binding domain Pcar_1633 PF02256 Iron hydrogenase small subunit Pcar_1633 PF02906 Iron only hydrogenase large subunit, C-terminal domain Pcar_1634 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Pcar_1634 PF00037 4Fe-4S binding domain Pcar_1634 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Pcar_1637 PF01985 CRS1 / YhbY (CRM) domain Pcar_1638 PF01966 HD domain Pcar_1638 PF13286 Phosphohydrolase-associated domain Pcar_1640 PF01467 Cytidylyltransferase-like Pcar_1641 PF02633 Creatinine amidohydrolase Pcar_1642 PF04055 Radical SAM superfamily Pcar_1643 PF01242 6-pyruvoyl tetrahydropterin synthase Pcar_1644 PF03884 DNA gyrase inhibitor YacG Pcar_1645 PF12627 Probable RNA and SrmB- binding site of polymerase A Pcar_1645 PF01743 Poly A polymerase head domain Pcar_1648 PF00850 Histone deacetylase domain Pcar_1649 PF11940 Domain of unknown function (DUF3458) Ig-like fold Pcar_1649 PF01433 Peptidase family M1 domain Pcar_1649 PF17432 Domain of unknown function (DUF3458_C) ARM repeats Pcar_1650 PF00749 tRNA synthetases class I (E and Q), catalytic domain Pcar_1651 PF01875 Memo-like protein Pcar_1658 PF11818 C-terminal domain of tail specific protease (DUF3340) Pcar_1658 PF00595 PDZ domain Pcar_1658 PF03572 Peptidase family S41 Pcar_1658 PF17804 Tail specific protease N-terminal domain Pcar_1659 PF07085 DRTGG domain Pcar_1659 PF02833 DHHA2 domain Pcar_1659 PF01368 DHH family Pcar_1659 PF00571 CBS domain Pcar_1661 PF01022 Bacterial regulatory protein, arsR family Pcar_1662 PF10672 S-adenosylmethionine-dependent methyltransferase Pcar_1662 PF17785 PUA-like domain Pcar_1663 PF08241 Methyltransferase domain Pcar_1664 PF00561 alpha/beta hydrolase fold Pcar_1665 PF00155 Aminotransferase class I and II Pcar_1666 PF03744 6-carboxyhexanoate--CoA ligase Pcar_1667 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Pcar_1667 PF02779 Transketolase, pyrimidine binding domain Pcar_1667 PF02780 Transketolase, C-terminal domain Pcar_1668 PF00348 Polyprenyl synthetase Pcar_1669 PF02609 Exonuclease VII small subunit Pcar_1670 PF13742 OB-fold nucleic acid binding domain Pcar_1670 PF02601 Exonuclease VII, large subunit Pcar_1671 PF13614 AAA domain Pcar_1672 PF04748 Divergent polysaccharide deacetylase Pcar_1673 PF13180 PDZ domain Pcar_1673 PF03572 Peptidase family S41 Pcar_1675 PF02687 FtsX-like permease family Pcar_1675 PF18075 FtsX extracellular domain Pcar_1676 PF00005 ABC transporter Pcar_1679 PF00263 Bacterial type II and III secretion system protein Pcar_1679 PF03958 Bacterial type II/III secretion system short domain Pcar_1684 PF00437 Type II/IV secretion system protein Pcar_1684 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Pcar_1685 PF00482 Type II secretion system (T2SS), protein F Pcar_1686 PF00216 Bacterial DNA-binding protein Pcar_1687 PF02190 ATP-dependent protease La (LON) substrate-binding domain Pcar_1687 PF05362 Lon protease (S16) C-terminal proteolytic domain Pcar_1687 PF00004 ATPase family associated with various cellular activities (AAA) Pcar_1688 PF07724 AAA domain (Cdc48 subfamily) Pcar_1688 PF10431 C-terminal, D2-small domain, of ClpB protein Pcar_1688 PF06689 ClpX C4-type zinc finger Pcar_1689 PF00574 Clp protease Pcar_1690 PF05698 Bacterial trigger factor protein (TF) C-terminus Pcar_1690 PF05697 Bacterial trigger factor protein (TF) Pcar_1690 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Pcar_1691 PF02223 Thymidylate kinase Pcar_1692 PF09115 DNA polymerase III, delta subunit, C terminal Pcar_1693 PF04468 PSP1 C-terminal conserved region Pcar_1694 PF08264 Anticodon-binding domain of tRNA Pcar_1694 PF09334 tRNA synthetases class I (M) Pcar_1694 PF01588 Putative tRNA binding domain Pcar_1695 PF01026 TatD related DNase Pcar_1700 PF00465 Iron-containing alcohol dehydrogenase Pcar_1701 PF00171 Aldehyde dehydrogenase family Pcar_1706 PF13811 Domain of unknown function (DUF4186) Pcar_1708 PF13361 UvrD-like helicase C-terminal domain Pcar_1708 PF00580 UvrD/REP helicase N-terminal domain Pcar_1708 PF12705 PD-(D/E)XK nuclease superfamily Pcar_1712 PF04945 YHS domain Pcar_1714 PF00873 AcrB/AcrD/AcrF family Pcar_1715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Pcar_1718 PF00291 Pyridoxal-phosphate dependent enzyme Pcar_1719 PF01053 Cys/Met metabolism PLP-dependent enzyme Pcar_1720 PF00899 ThiF family Pcar_1722 PF04055 Radical SAM superfamily Pcar_1722 PF06968 Biotin and Thiamin Synthesis associated domain Pcar_1723 PF00884 Sulfatase Pcar_1723 PF11893 Domain of unknown function (DUF3413) Pcar_1724 PF00884 Sulfatase Pcar_1724 PF08019 Phosphoethanolamine transferase EptA/EptB Pcar_1725 PF00672 HAMP domain Pcar_1725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_1725 PF00512 His Kinase A (phospho-acceptor) domain Pcar_1726 PF00486 Transcriptional regulatory protein, C terminal Pcar_1726 PF00072 Response regulator receiver domain Pcar_1727 PF02445 Quinolinate synthetase A protein Pcar_1729 PF00266 Aminotransferase class-V Pcar_1730 PF02082 Transcriptional regulator Pcar_1731 PF11897 Protein of unknown function (DUF3417) Pcar_1731 PF00343 Carbohydrate phosphorylase Pcar_1732 PF02219 Methylenetetrahydrofolate reductase Pcar_1733 PF00248 Aldo/keto reductase family Pcar_1734 PF01590 GAF domain Pcar_1734 PF02954 Bacterial regulatory protein, Fis family Pcar_1734 PF00158 Sigma-54 interaction domain Pcar_1735 PF00005 ABC transporter Pcar_1735 PF08402 TOBE domain Pcar_1736 PF00528 Binding-protein-dependent transport system inner membrane component Pcar_1739 PF01726 LexA DNA binding domain Pcar_1739 PF00717 Peptidase S24-like Pcar_1740 PF11799 impB/mucB/samB family C-terminal domain Pcar_1740 PF00817 impB/mucB/samB family Pcar_1741 PF14579 Helix-hairpin-helix motif Pcar_1741 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Pcar_1741 PF07733 Bacterial DNA polymerase III alpha NTPase domain Pcar_1741 PF02811 PHP domain Pcar_1747 PF04972 BON domain Pcar_1747 PF00263 Bacterial type II and III secretion system protein Pcar_1747 PF13629 Pilus formation protein N terminal region Pcar_1752 PF00437 Type II/IV secretion system protein Pcar_1758 PF00535 Glycosyl transferase family 2 Pcar_1764 PF00183 Hsp90 protein Pcar_1765 PF03190 Protein of unknown function, DUF255 Pcar_1766 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain Pcar_1766 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain Pcar_1767 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Pcar_1767 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Pcar_1768 PF00009 Elongation factor Tu GTP binding domain Pcar_1769 PF01507 Phosphoadenosine phosphosulfate reductase family Pcar_1770 PF01507 Phosphoadenosine phosphosulfate reductase family Pcar_1772 PF01451 Low molecular weight phosphotyrosine protein phosphatase Pcar_1775 PF04333 MlaA lipoprotein Pcar_1776 PF01202 Shikimate kinase Pcar_1779 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Pcar_1779 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Pcar_1779 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Pcar_1779 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Pcar_1785 PF11638 DnaA N-terminal domain Pcar_1785 PF00308 Bacterial dnaA protein Pcar_1785 PF08299 Bacterial dnaA protein helix-turn-helix Pcar_1786 PF01381 Helix-turn-helix Pcar_1792 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Pcar_1792 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Pcar_1792 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Pcar_1792 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Pcar_1794 PF00483 Nucleotidyl transferase Pcar_1794 PF01050 Mannose-6-phosphate isomerase Pcar_1796 PF00535 Glycosyl transferase family 2 Pcar_1798 PF13439 Glycosyltransferase Family 4 Pcar_1798 PF00534 Glycosyl transferases group 1 Pcar_1802 PF00132 Bacterial transferase hexapeptide (six repeats) Pcar_1803 PF01943 Polysaccharide biosynthesis protein Pcar_1803 PF14667 Polysaccharide biosynthesis C-terminal domain Pcar_1804 PF16363 GDP-mannose 4,6 dehydratase Pcar_1805 PF01380 SIS domain Pcar_1806 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Pcar_1806 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Pcar_1806 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Pcar_1807 PF16363 GDP-mannose 4,6 dehydratase Pcar_1811 PF11855 Protein of unknown function (DUF3375) Pcar_1823 PF13356 Arm DNA-binding domain Pcar_1823 PF00589 Phage integrase family Pcar_1824 PF01668 SmpB protein Pcar_1827 PF01979 Amidohydrolase family Pcar_1828 PF02261 Aspartate decarboxylase Pcar_1829 PF02569 Pantoate-beta-alanine ligase Pcar_1830 PF02548 Ketopantoate hydroxymethyltransferase Pcar_1831 PF05088 Bacterial NAD-glutamate dehydrogenase Pcar_1838 PF01226 Formate/nitrite transporter Pcar_1839 PF12804 MobA-like NTP transferase domain Pcar_1840 PF02634 FdhD/NarQ family Pcar_1841 PF00266 Aminotransferase class-V Pcar_1842 PF00132 Bacterial transferase hexapeptide (six repeats) Pcar_1842 PF00101 Ribulose bisphosphate carboxylase, small chain Pcar_1844 PF00037 4Fe-4S binding domain Pcar_1844 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Pcar_1844 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Pcar_1848 PF00398 Ribosomal RNA adenine dimethylase Pcar_1850 PF00814 Glycoprotease family Pcar_1851 PF02562 PhoH-like protein Pcar_1851 PF13638 PIN domain Pcar_1852 PF03477 ATP cone domain Pcar_1852 PF02867 Ribonucleotide reductase, barrel domain Pcar_1852 PF00317 Ribonucleotide reductase, all-alpha domain Pcar_1853 PF03692 Putative zinc- or iron-chelating domain Pcar_1855 PF03009 Glycerophosphoryl diester phosphodiesterase family Pcar_1857 PF01938 TRAM domain Pcar_1857 PF00919 Uncharacterized protein family UPF0004 Pcar_1857 PF04055 Radical SAM superfamily Pcar_1859 PF01592 NifU-like N terminal domain Pcar_1860 PF00266 Aminotransferase class-V Pcar_1861 PF02082 Transcriptional regulator Pcar_1862 PF00132 Bacterial transferase hexapeptide (six repeats) Pcar_1862 PF06426 Serine acetyltransferase, N-terminal Pcar_1864 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Pcar_1864 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Pcar_1864 PF06827 Zinc finger found in FPG and IleRS Pcar_1865 PF00209 Sodium:neurotransmitter symporter family Pcar_1867 PF00528 Binding-protein-dependent transport system inner membrane component Pcar_1867 PF12911 N-terminal TM domain of oligopeptide transport permease C Pcar_1868 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Pcar_1868 PF00437 Type II/IV secretion system protein Pcar_1869 PF00528 Binding-protein-dependent transport system inner membrane component Pcar_1870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Pcar_1874 PF01740 STAS domain Pcar_1876 PF13419 Haloacid dehalogenase-like hydrolase Pcar_1877 PF01790 Prolipoprotein diacylglyceryl transferase Pcar_1878 PF00849 RNA pseudouridylate synthase Pcar_1878 PF01479 S4 domain Pcar_1879 PF01008 Initiation factor 2 subunit family Pcar_1879 PF03061 Thioesterase superfamily Pcar_1880 PF00216 Bacterial DNA-binding protein Pcar_1881 PF01343 Peptidase family S49 Pcar_1882 PF00575 S1 RNA binding domain Pcar_1883 PF02401 LytB protein Pcar_1884 PF02224 Cytidylate kinase Pcar_1885 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Pcar_1886 PF02153 Prephenate dehydrogenase Pcar_1887 PF01842 ACT domain Pcar_1887 PF01817 Chorismate mutase type II Pcar_1887 PF00800 Prephenate dehydratase Pcar_1888 PF00155 Aminotransferase class I and II Pcar_1890 PF17768 RecJ OB domain Pcar_1890 PF10141 Single-strand DNA-specific exonuclease, C terminal domain Pcar_1890 PF02272 DHHA1 domain Pcar_1890 PF01368 DHH family Pcar_1891 PF07549 SecD/SecF GG Motif Pcar_1891 PF02355 Protein export membrane protein Pcar_1892 PF07549 SecD/SecF GG Motif Pcar_1892 PF02355 Protein export membrane protein Pcar_1893 PF02699 Preprotein translocase subunit Pcar_1894 PF01702 Queuine tRNA-ribosyltransferase Pcar_1895 PF02547 Queuosine biosynthesis protein Pcar_1897 PF08497 Radical SAM N-terminal Pcar_1897 PF11842 Domain of unknown function (DUF3362) Pcar_1897 PF04055 Radical SAM superfamily Pcar_1898 PF01118 Semialdehyde dehydrogenase, NAD binding domain Pcar_1898 PF02774 Semialdehyde dehydrogenase, dimerisation domain Pcar_1899 PF00380 Ribosomal protein S9/S16 Pcar_1900 PF00572 Ribosomal protein L13 Pcar_1901 PF01416 tRNA pseudouridine synthase Pcar_1903 PF01118 Semialdehyde dehydrogenase, NAD binding domain Pcar_1903 PF02774 Semialdehyde dehydrogenase, dimerisation domain Pcar_1904 PF00180 Isocitrate/isopropylmalate dehydrogenase Pcar_1905 PF00694 Aconitase C-terminal domain Pcar_1906 PF00330 Aconitase family (aconitate hydratase) Pcar_1907 PF08502 LeuA allosteric (dimerisation) domain Pcar_1907 PF00682 HMGL-like Pcar_1908 PF02666 Phosphatidylserine decarboxylase Pcar_1909 PF01842 ACT domain Pcar_1909 PF10369 Small subunit of acetolactate synthase Pcar_1910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Pcar_1910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Pcar_1910 PF00205 Thiamine pyrophosphate enzyme, central domain Pcar_1911 PF00920 Dehydratase family Pcar_1913 PF00814 Glycoprotease family Pcar_1914 PF17820 PDZ domain Pcar_1914 PF02163 Peptidase family M50 Pcar_1915 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Pcar_1915 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Pcar_1915 PF13288 DXP reductoisomerase C-terminal domain Pcar_1917 PF01255 Putative undecaprenyl diphosphate synthase Pcar_1918 PF01765 Ribosome recycling factor Pcar_1919 PF00696 Amino acid kinase family Pcar_1920 PF00889 Elongation factor TS Pcar_1921 PF00318 Ribosomal protein S2 Pcar_1924 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Pcar_1924 PF05221 S-adenosyl-L-homocysteine hydrolase Pcar_1925 PF01022 Bacterial regulatory protein, arsR family Pcar_1927 PF00535 Glycosyl transferase family 2 Pcar_1928 PF02773 S-adenosylmethionine synthetase, C-terminal domain Pcar_1928 PF02772 S-adenosylmethionine synthetase, central domain Pcar_1928 PF00438 S-adenosylmethionine synthetase, N-terminal domain Pcar_1929 PF05524 PEP-utilising enzyme, N-terminal Pcar_1929 PF00391 PEP-utilising enzyme, mobile domain Pcar_1929 PF02896 PEP-utilising enzyme, TIM barrel domain Pcar_1930 PF00381 PTS HPr component phosphorylation site Pcar_1931 PF03613 PTS system mannose/fructose/sorbose family IID component Pcar_1933 PF03830 PTS system sorbose subfamily IIB component Pcar_1933 PF03610 PTS system fructose IIA component Pcar_1935 PF03668 P-loop ATPase protein family Pcar_1936 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Pcar_1937 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus Pcar_1937 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Pcar_1938 PF00309 Sigma-54 factor, Activator interacting domain (AID) Pcar_1938 PF04963 Sigma-54 factor, core binding domain Pcar_1938 PF04552 Sigma-54, DNA binding domain Pcar_1939 PF00005 ABC transporter Pcar_1943 PF00571 CBS domain Pcar_1943 PF01380 SIS domain Pcar_1944 PF00793 DAHP synthetase I family Pcar_1945 PF00117 Glutamine amidotransferase class-I Pcar_1945 PF06418 CTP synthase N-terminus Pcar_1946 PF02348 Cytidylyltransferase Pcar_1947 PF07715 TonB-dependent Receptor Plug Domain Pcar_1949 PF01627 Hpt domain Pcar_1949 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Pcar_1949 PF00072 Response regulator receiver domain Pcar_1949 PF00512 His Kinase A (phospho-acceptor) domain Pcar_1949 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_1949 PF00672 HAMP domain Pcar_1950 PF02742 Iron dependent repressor, metal binding and dimerisation domain Pcar_1950 PF18357 Diphteria toxin repressor SH3 domain Pcar_1950 PF01325 Iron dependent repressor, N-terminal DNA binding domain Pcar_1951 PF02421 Ferrous iron transport protein B Pcar_1951 PF17910 FeoB cytosolic helical domain Pcar_1951 PF07664 Ferrous iron transport protein B C terminus Pcar_1951 PF07670 Nucleoside recognition Pcar_1952 PF01475 Ferric uptake regulator family Pcar_1953 PF02683 Cytochrome C biogenesis protein transmembrane region Pcar_1954 PF00578 AhpC/TSA family Pcar_1957 PF00682 HMGL-like Pcar_1957 PF02436 Conserved carboxylase domain Pcar_1957 PF00364 Biotin-requiring enzyme Pcar_1957 PF00289 Biotin carboxylase, N-terminal domain Pcar_1957 PF02785 Biotin carboxylase C-terminal domain Pcar_1957 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Pcar_1958 PF01145 SPFH domain / Band 7 family Pcar_1958 PF16200 C-terminal region of band_7 Pcar_1960 PF02954 Bacterial regulatory protein, Fis family Pcar_1960 PF00158 Sigma-54 interaction domain Pcar_1960 PF00072 Response regulator receiver domain Pcar_1962 PF01321 Creatinase/Prolidase N-terminal domain Pcar_1962 PF00557 Metallopeptidase family M24 Pcar_1963 PF13193 AMP-binding enzyme C-terminal domain Pcar_1963 PF00501 AMP-binding enzyme Pcar_1965 PF02308 MgtC family Pcar_1966 PF00994 Probable molybdopterin binding domain Pcar_1969 PF03144 Elongation factor Tu domain 2 Pcar_1969 PF00679 Elongation factor G C-terminus Pcar_1969 PF00009 Elongation factor Tu GTP binding domain Pcar_1969 PF14492 Elongation Factor G, domain II Pcar_1969 PF03764 Elongation factor G, domain IV Pcar_1970 PF03309 Type III pantothenate kinase Pcar_1971 PF03099 Biotin/lipoate A/B protein ligase family Pcar_1971 PF02237 Biotin protein ligase C terminal domain Pcar_1971 PF08279 HTH domain Pcar_1972 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Pcar_1972 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Pcar_1973 PF00691 OmpA family Pcar_1973 PF13488 Glycine zipper Pcar_1977 PF02535 ZIP Zinc transporter Pcar_1978 PF00149 Calcineurin-like phosphoesterase Pcar_1979 PF03631 Virulence factor BrkB Pcar_1980 PF05193 Peptidase M16 inactive domain Pcar_1981 PF00675 Insulinase (Peptidase family M16) Pcar_1981 PF05193 Peptidase M16 inactive domain Pcar_1982 PF02190 ATP-dependent protease La (LON) substrate-binding domain Pcar_1982 PF00004 ATPase family associated with various cellular activities (AAA) Pcar_1982 PF05362 Lon protease (S16) C-terminal proteolytic domain Pcar_1983 PF00348 Polyprenyl synthetase Pcar_1985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Pcar_1985 PF17200 Single Cache domain 2 Pcar_1985 PF00672 HAMP domain Pcar_1986 PF12706 Beta-lactamase superfamily domain Pcar_1988 PF00484 Carbonic anhydrase Pcar_1989 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Pcar_1989 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Pcar_1989 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Pcar_1989 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Pcar_1991 PF00285 Citrate synthase, C-terminal domain Pcar_1992 PF01207 Dihydrouridine synthase (Dus) Pcar_1993 PF00512 His Kinase A (phospho-acceptor) domain Pcar_1993 PF00989 PAS fold Pcar_1993 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_1994 PF00158 Sigma-54 interaction domain Pcar_1994 PF02954 Bacterial regulatory protein, Fis family Pcar_1994 PF00072 Response regulator receiver domain Pcar_1995 PF00772 DnaB-like helicase N terminal domain Pcar_1995 PF03796 DnaB-like helicase C terminal domain Pcar_1996 PF03948 Ribosomal protein L9, C-terminal domain Pcar_1996 PF01281 Ribosomal protein L9, N-terminal domain Pcar_1998 PF01084 Ribosomal protein S18 Pcar_1999 PF01250 Ribosomal protein S6 Pcar_2000 PF01926 50S ribosome-binding GTPase Pcar_2000 PF06071 Protein of unknown function (DUF933) Pcar_2001 PF03030 Inorganic H+ pyrophosphatase Pcar_2002 PF01195 Peptidyl-tRNA hydrolase Pcar_2003 PF01386 Ribosomal L25p family Pcar_2003 PF14693 Ribosomal protein TL5, C-terminal domain Pcar_2004 PF14572 Phosphoribosyl synthetase-associated domain Pcar_2004 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Pcar_2005 PF08544 GHMP kinases C terminal Pcar_2005 PF00288 GHMP kinases N terminal domain Pcar_2006 PF00004 ATPase family associated with various cellular activities (AAA) Pcar_2006 PF16450 Proteasomal ATPase OB C-terminal domain Pcar_2006 PF17758 Proteasomal ATPase OB N-terminal domain Pcar_2007 PF03649 Uncharacterised protein family (UPF0014) Pcar_2008 PF00005 ABC transporter Pcar_2009 PF03167 Uracil DNA glycosylase superfamily Pcar_2011 PF04127 DNA / pantothenate metabolism flavoprotein Pcar_2011 PF02441 Flavoprotein Pcar_2012 PF00753 Metallo-beta-lactamase superfamily Pcar_2013 PF01966 HD domain Pcar_2013 PF01336 OB-fold nucleic acid binding domain Pcar_2015 PF00512 His Kinase A (phospho-acceptor) domain Pcar_2015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_2016 PF00582 Universal stress protein family Pcar_2017 PF02954 Bacterial regulatory protein, Fis family Pcar_2017 PF00072 Response regulator receiver domain Pcar_2017 PF00158 Sigma-54 interaction domain Pcar_2018 PF01048 Phosphorylase superfamily Pcar_2021 PF01048 Phosphorylase superfamily Pcar_2022 PF04055 Radical SAM superfamily Pcar_2023 PF00334 Nucleoside diphosphate kinase Pcar_2024 PF01502 Phosphoribosyl-AMP cyclohydrolase Pcar_2025 PF07689 KaiB domain Pcar_2025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_2025 PF00512 His Kinase A (phospho-acceptor) domain Pcar_2026 PF17969 L,D-transpeptidase C-terminal domain Pcar_2026 PF01476 LysM domain Pcar_2026 PF03734 L,D-transpeptidase catalytic domain Pcar_2029 PF01725 Ham1 family Pcar_2030 PF01138 3' exoribonuclease family, domain 1 Pcar_2030 PF03725 3' exoribonuclease family, domain 2 Pcar_2031 PF01520 N-acetylmuramoyl-L-alanine amidase Pcar_2036 PF01661 Macro domain Pcar_2038 PF00005 ABC transporter Pcar_2038 PF16326 ABC transporter C-terminal domain Pcar_2038 PF12848 ABC transporter Pcar_2039 PF10150 Ribonuclease E/G family Pcar_2039 PF12111 Polyribonucleotide phosphorylase C terminal Pcar_2039 PF00575 S1 RNA binding domain Pcar_2040 PF01713 Smr domain Pcar_2042 PF00877 NlpC/P60 family Pcar_2042 PF01476 LysM domain Pcar_2043 PF16360 GTP-binding GTPase Middle Region Pcar_2043 PF13167 GTP-binding GTPase N-terminal Pcar_2043 PF01926 50S ribosome-binding GTPase Pcar_2045 PF00072 Response regulator receiver domain Pcar_2045 PF01584 CheW-like domain Pcar_2046 PF00990 Diguanylate cyclase, GGDEF domain Pcar_2046 PF00563 EAL domain Pcar_2046 PF03707 Bacterial signalling protein N terminal repeat Pcar_2051 PF00270 DEAD/DEAH box helicase Pcar_2051 PF00271 Helicase conserved C-terminal domain Pcar_2051 PF00570 HRDC domain Pcar_2051 PF16124 RecQ zinc-binding Pcar_2051 PF09382 RQC domain Pcar_2052 PF13559 Domain of unknown function (DUF4129) Pcar_2052 PF11992 Domain of unknown function (DUF3488) Pcar_2052 PF01841 Transglutaminase-like superfamily Pcar_2054 PF07726 ATPase family associated with various cellular activities (AAA) Pcar_2054 PF17863 AAA lid domain Pcar_2066 PF00850 Histone deacetylase domain Pcar_2070 PF02659 Putative manganese efflux pump Pcar_2072 PF10672 S-adenosylmethionine-dependent methyltransferase Pcar_2072 PF02926 THUMP domain Pcar_2072 PF01170 Putative RNA methylase family UPF0020 Pcar_2073 PF00939 Sodium:sulfate symporter transmembrane region Pcar_2074 PF00994 Probable molybdopterin binding domain Pcar_2075 PF00563 EAL domain Pcar_2075 PF00990 Diguanylate cyclase, GGDEF domain Pcar_2075 PF03707 Bacterial signalling protein N terminal repeat Pcar_2076 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Pcar_2077 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Pcar_2078 PF01048 Phosphorylase superfamily Pcar_2079 PF04055 Radical SAM superfamily Pcar_2079 PF06463 Molybdenum Cofactor Synthesis C Pcar_2082 PF03176 MMPL family Pcar_2083 PF00202 Aminotransferase class-III Pcar_2085 PF00005 ABC transporter Pcar_2085 PF08402 TOBE domain Pcar_2086 PF00528 Binding-protein-dependent transport system inner membrane component Pcar_2088 PF01980 tRNA-methyltransferase O Pcar_2089 PF13847 Methyltransferase domain Pcar_2090 PF09335 SNARE associated Golgi protein Pcar_2091 PF00072 Response regulator receiver domain Pcar_2091 PF03861 ANTAR domain Pcar_2092 PF07357 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) Pcar_2093 PF03747 ADP-ribosylglycohydrolase Pcar_2095 PF16653 Saccharopine dehydrogenase C-terminal domain Pcar_2095 PF03435 Saccharopine dehydrogenase NADP binding domain Pcar_2096 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Pcar_2097 PF17810 Arginine decarboxylase helical bundle domain Pcar_2097 PF17944 Arginine decarboxylase C-terminal helical extension Pcar_2097 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Pcar_2098 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Pcar_2099 PF00148 Nitrogenase component 1 type Oxidoreductase Pcar_2100 PF11844 Domain of unknown function (DUF3364) Pcar_2100 PF00148 Nitrogenase component 1 type Oxidoreductase Pcar_2101 PF02579 Dinitrogenase iron-molybdenum cofactor Pcar_2102 PF12838 4Fe-4S dicluster domain Pcar_2106 PF00005 ABC transporter Pcar_2106 PF02687 FtsX-like permease family Pcar_2106 PF12704 MacB-like periplasmic core domain Pcar_2107 PF02579 Dinitrogenase iron-molybdenum cofactor Pcar_2107 PF04055 Radical SAM superfamily Pcar_2108 PF00528 Binding-protein-dependent transport system inner membrane component Pcar_2109 PF03459 TOBE domain Pcar_2109 PF00005 ABC transporter Pcar_2110 PF00682 HMGL-like Pcar_2113 PF13091 PLD-like domain Pcar_2115 PF00501 AMP-binding enzyme Pcar_2115 PF14535 AMP-binding enzyme C-terminal domain Pcar_2119 PF05167 Uncharacterised ACR (DUF711) Pcar_2123 PF02661 Fic/DOC family Pcar_2123 PF13784 Fic/DOC family N-terminal Pcar_2127 PF02785 Biotin carboxylase C-terminal domain Pcar_2127 PF00289 Biotin carboxylase, N-terminal domain Pcar_2127 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Pcar_2128 PF00364 Biotin-requiring enzyme Pcar_2129 PF01321 Creatinase/Prolidase N-terminal domain Pcar_2129 PF00557 Metallopeptidase family M24 Pcar_2132 PF01761 3-dehydroquinate synthase Pcar_2133 PF01264 Chorismate synthase Pcar_2134 PF03958 Bacterial type II/III secretion system short domain Pcar_2134 PF07660 Secretin and TonB N terminus short domain Pcar_2134 PF11741 AMIN domain Pcar_2134 PF00263 Bacterial type II and III secretion system protein Pcar_2138 PF11104 Type IV pilus assembly protein PilM; Pcar_2139 PF06750 Bacterial Peptidase A24 N-terminal domain Pcar_2139 PF01478 Type IV leader peptidase family Pcar_2142 PF00005 ABC transporter Pcar_2143 PF07963 Prokaryotic N-terminal methylation motif Pcar_2143 PF00114 Pilin (bacterial filament) Pcar_2144 PF07963 Prokaryotic N-terminal methylation motif Pcar_2144 PF00114 Pilin (bacterial filament) Pcar_2145 PF00158 Sigma-54 interaction domain Pcar_2145 PF02954 Bacterial regulatory protein, Fis family Pcar_2145 PF00072 Response regulator receiver domain Pcar_2146 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_2146 PF00989 PAS fold Pcar_2146 PF00512 His Kinase A (phospho-acceptor) domain Pcar_2147 PF00482 Type II secretion system (T2SS), protein F Pcar_2148 PF00437 Type II/IV secretion system protein Pcar_2149 PF00437 Type II/IV secretion system protein Pcar_2149 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Pcar_2150 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Pcar_2150 PF01488 Shikimate / quinate 5-dehydrogenase Pcar_2150 PF08501 Shikimate dehydrogenase substrate binding domain Pcar_2151 PF06574 FAD synthetase Pcar_2151 PF01687 Riboflavin kinase Pcar_2152 PF00575 S1 RNA binding domain Pcar_2152 PF08206 Ribonuclease B OB domain Pcar_2152 PF00773 RNB domain Pcar_2152 PF17876 Cold shock domain Pcar_2154 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor Pcar_2154 PF07963 Prokaryotic N-terminal methylation motif Pcar_2155 PF05567 Neisseria PilC beta-propeller domain Pcar_2160 PF02954 Bacterial regulatory protein, Fis family Pcar_2160 PF00158 Sigma-54 interaction domain Pcar_2160 PF00072 Response regulator receiver domain Pcar_2161 PF13426 PAS domain Pcar_2161 PF13188 PAS domain Pcar_2161 PF00989 PAS fold Pcar_2161 PF00512 His Kinase A (phospho-acceptor) domain Pcar_2161 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_2165 PF06434 Aconitate hydratase 2 N-terminus Pcar_2165 PF00330 Aconitase family (aconitate hydratase) Pcar_2165 PF11791 Aconitate B N-terminal domain Pcar_2166 PF00691 OmpA family Pcar_2166 PF05736 OprF membrane domain Pcar_2167 PF02686 Glu-tRNAGln amidotransferase C subunit Pcar_2168 PF01425 Amidase Pcar_2169 PF02934 GatB/GatE catalytic domain Pcar_2169 PF02637 GatB domain Pcar_2170 PF01008 Initiation factor 2 subunit family Pcar_2171 PF08335 GlnD PII-uridylyltransferase Pcar_2171 PF03710 Glutamate-ammonia ligase adenylyltransferase Pcar_2173 PF16326 ABC transporter C-terminal domain Pcar_2173 PF12848 ABC transporter Pcar_2173 PF00005 ABC transporter Pcar_2174 PF01202 Shikimate kinase Pcar_2175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Pcar_2175 PF07992 Pyridine nucleotide-disulphide oxidoreductase Pcar_2176 PF03466 LysR substrate binding domain Pcar_2176 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Pcar_2178 PF01220 Dehydroquinase class II Pcar_2180 PF08240 Alcohol dehydrogenase GroES-like domain Pcar_2180 PF00107 Zinc-binding dehydrogenase Pcar_2181 PF07690 Major Facilitator Superfamily Pcar_2182 PF13411 MerR HTH family regulatory protein Pcar_2184 PF07690 Major Facilitator Superfamily Pcar_2188 PF01487 Type I 3-dehydroquinase Pcar_2189 PF07690 Major Facilitator Superfamily Pcar_2191 PF01261 Xylose isomerase-like TIM barrel Pcar_2192 PF08501 Shikimate dehydrogenase substrate binding domain Pcar_2193 PF07992 Pyridine nucleotide-disulphide oxidoreductase Pcar_2193 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Pcar_2196 PF12327 FtsZ family, C-terminal domain Pcar_2196 PF00091 Tubulin/FtsZ family, GTPase domain Pcar_2197 PF02491 SHS2 domain inserted in FTSA Pcar_2198 PF08478 POTRA domain, FtsQ-type Pcar_2198 PF03799 Cell division protein FtsQ Pcar_2199 PF07478 D-ala D-ala ligase C-terminus Pcar_2199 PF01820 D-ala D-ala ligase N-terminus Pcar_2200 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Pcar_2200 PF01565 FAD binding domain Pcar_2201 PF02875 Mur ligase family, glutamate ligase domain Pcar_2201 PF08245 Mur ligase middle domain Pcar_2201 PF01225 Mur ligase family, catalytic domain Pcar_2202 PF04101 Glycosyltransferase family 28 C-terminal domain Pcar_2202 PF03033 Glycosyltransferase family 28 N-terminal domain Pcar_2203 PF01098 Cell cycle protein Pcar_2204 PF02875 Mur ligase family, glutamate ligase domain Pcar_2204 PF08245 Mur ligase middle domain Pcar_2205 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Pcar_2205 PF00953 Glycosyl transferase family 4 Pcar_2206 PF02875 Mur ligase family, glutamate ligase domain Pcar_2206 PF08245 Mur ligase middle domain Pcar_2206 PF01225 Mur ligase family, catalytic domain Pcar_2207 PF01225 Mur ligase family, catalytic domain Pcar_2207 PF02875 Mur ligase family, glutamate ligase domain Pcar_2207 PF08245 Mur ligase middle domain Pcar_2208 PF03717 Penicillin-binding Protein dimerisation domain Pcar_2208 PF00905 Penicillin binding protein transpeptidase domain Pcar_2209 PF04999 Cell division protein FtsL Pcar_2210 PF01795 MraW methylase family Pcar_2211 PF02381 MraZ protein, putative antitoxin-like Pcar_2212 PF03471 Transporter associated domain Pcar_2212 PF00571 CBS domain Pcar_2212 PF01595 Cyclin M transmembrane N-terminal domain Pcar_2213 PF00533 BRCA1 C Terminus (BRCT) domain Pcar_2213 PF12826 Helix-hairpin-helix motif Pcar_2213 PF01653 NAD-dependent DNA ligase adenylation domain Pcar_2213 PF03120 NAD-dependent DNA ligase OB-fold domain Pcar_2213 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Pcar_2214 PF00708 Acylphosphatase Pcar_2215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Pcar_2216 PF00795 Carbon-nitrogen hydrolase Pcar_2216 PF02540 NAD synthase Pcar_2217 PF02021 Uncharacterised protein family UPF0102 Pcar_2218 PF01351 Ribonuclease HII Pcar_2219 PF01245 Ribosomal protein L19 Pcar_2220 PF09936 SAM-dependent RNA methyltransferase Pcar_2221 PF01746 tRNA (Guanine-1)-methyltransferase Pcar_2222 PF01782 RimM N-terminal domain Pcar_2224 PF00886 Ribosomal protein S16 Pcar_2225 PF02978 Signal peptide binding domain Pcar_2225 PF00448 SRP54-type protein, GTPase domain Pcar_2225 PF02881 SRP54-type protein, helical bundle domain Pcar_2227 PF05175 Methyltransferase small domain Pcar_2228 PF01578 Cytochrome C assembly protein Pcar_2229 PF05140 ResB-like family Pcar_2230 PF00731 AIR carboxylase Pcar_2231 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Pcar_2231 PF02843 Phosphoribosylglycinamide synthetase, C domain Pcar_2231 PF02844 Phosphoribosylglycinamide synthetase, N domain Pcar_2232 PF01808 AICARFT/IMPCHase bienzyme Pcar_2232 PF02142 MGS-like domain Pcar_2234 PF01168 Alanine racemase, N-terminal domain Pcar_2234 PF00842 Alanine racemase, C-terminal domain Pcar_2235 PF02581 Thiamine monophosphate synthase Pcar_2235 PF08543 Phosphomethylpyrimidine kinase Pcar_2236 PF01964 Radical SAM ThiC family Pcar_2239 PF07702 UTRA domain Pcar_2239 PF00392 Bacterial regulatory proteins, gntR family Pcar_2240 PF00291 Pyridoxal-phosphate dependent enzyme Pcar_2241 PF00290 Tryptophan synthase alpha chain Pcar_2242 PF13419 Haloacid dehalogenase-like hydrolase Pcar_2243 PF13533 Biotin-lipoyl like Pcar_2244 PF00873 AcrB/AcrD/AcrF family Pcar_2245 PF13180 PDZ domain Pcar_2247 PF01554 MatE Pcar_2249 PF00990 Diguanylate cyclase, GGDEF domain Pcar_2251 PF01370 NAD dependent epimerase/dehydratase family Pcar_2252 PF00535 Glycosyl transferase family 2 Pcar_2253 PF01116 Fructose-bisphosphate aldolase class-II Pcar_2254 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Pcar_2254 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Pcar_2255 PF01165 Ribosomal protein S21 Pcar_2256 PF01170 Putative RNA methylase family UPF0020 Pcar_2256 PF02926 THUMP domain Pcar_2259 PF03588 Leucyl/phenylalanyl-tRNA protein transferase Pcar_2260 PF07724 AAA domain (Cdc48 subfamily) Pcar_2260 PF00004 ATPase family associated with various cellular activities (AAA) Pcar_2260 PF02861 Clp amino terminal domain, pathogenicity island component Pcar_2260 PF10431 C-terminal, D2-small domain, of ClpB protein Pcar_2260 PF17871 AAA lid domain Pcar_2261 PF02617 ATP-dependent Clp protease adaptor protein ClpS Pcar_2262 PF01145 SPFH domain / Band 7 family Pcar_2263 PF01145 SPFH domain / Band 7 family Pcar_2269 PF01348 Type II intron maturase Pcar_2269 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Pcar_2272 PF07152 YaeQ protein Pcar_2274 PF00581 Rhodanese-like domain Pcar_2275 PF07992 Pyridine nucleotide-disulphide oxidoreductase Pcar_2275 PF18113 Rubredoxin binding C-terminal domain Pcar_2277 PF04536 TPM domain Pcar_2279 PF00690 Cation transporter/ATPase, N-terminus Pcar_2279 PF00689 Cation transporting ATPase, C-terminus Pcar_2281 PF05636 HIGH Nucleotidyl Transferase Pcar_2282 PF03749 Sugar fermentation stimulation protein RE domain Pcar_2282 PF17746 SfsA N-terminal OB domain Pcar_2284 PF00753 Metallo-beta-lactamase superfamily Pcar_2284 PF00258 Flavodoxin Pcar_2284 PF00301 Rubredoxin Pcar_2285 PF13419 Haloacid dehalogenase-like hydrolase Pcar_2286 PF01329 Pterin 4 alpha carbinolamine dehydratase Pcar_2287 PF01546 Peptidase family M20/M25/M40 Pcar_2287 PF07687 Peptidase dimerisation domain Pcar_2288 PF01844 HNH endonuclease Pcar_2291 PF00990 Diguanylate cyclase, GGDEF domain Pcar_2291 PF17151 Periplasmic sensor domain Pcar_2295 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Pcar_2295 PF07992 Pyridine nucleotide-disulphide oxidoreductase Pcar_2296 PF03707 Bacterial signalling protein N terminal repeat Pcar_2296 PF00990 Diguanylate cyclase, GGDEF domain Pcar_2296 PF00563 EAL domain Pcar_2296 PF13188 PAS domain Pcar_2297 PF00990 Diguanylate cyclase, GGDEF domain Pcar_2297 PF05230 MASE2 domain Pcar_2301 PF02666 Phosphatidylserine decarboxylase Pcar_2303 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Pcar_2303 PF02203 Tar ligand binding domain homologue Pcar_2303 PF00672 HAMP domain Pcar_2304 PF01569 PAP2 superfamily Pcar_2305 PF13439 Glycosyltransferase Family 4 Pcar_2305 PF00534 Glycosyl transferases group 1 Pcar_2308 PF13230 Glutamine amidotransferases class-II Pcar_2309 PF18030 RimK PreATP-grasp domain Pcar_2309 PF08443 RimK-like ATP-grasp domain Pcar_2310 PF18030 RimK PreATP-grasp domain Pcar_2310 PF08443 RimK-like ATP-grasp domain Pcar_2312 PF00072 Response regulator receiver domain Pcar_2312 PF02954 Bacterial regulatory protein, Fis family Pcar_2312 PF00158 Sigma-54 interaction domain Pcar_2313 PF00391 PEP-utilising enzyme, mobile domain Pcar_2313 PF05524 PEP-utilising enzyme, N-terminal Pcar_2313 PF02896 PEP-utilising enzyme, TIM barrel domain Pcar_2314 PF00990 Diguanylate cyclase, GGDEF domain Pcar_2314 PF03707 Bacterial signalling protein N terminal repeat Pcar_2314 PF00563 EAL domain Pcar_2315 PF10458 Valyl tRNA synthetase tRNA binding arm Pcar_2315 PF08264 Anticodon-binding domain of tRNA Pcar_2315 PF00133 tRNA synthetases class I (I, L, M and V) Pcar_2316 PF00072 Response regulator receiver domain Pcar_2316 PF00486 Transcriptional regulatory protein, C terminal Pcar_2320 PF01676 Metalloenzyme superfamily Pcar_2321 PF01791 DeoC/LacD family aldolase Pcar_2322 PF01960 ArgJ family Pcar_2323 PF07516 SecA Wing and Scaffold domain Pcar_2323 PF01043 SecA preprotein cross-linking domain Pcar_2323 PF07517 SecA DEAD-like domain Pcar_2323 PF02810 SEC-C motif Pcar_2324 PF01551 Peptidase family M23 Pcar_2324 PF04225 Opacity-associated protein A LysM-like domain Pcar_2325 PF00583 Acetyltransferase (GNAT) family Pcar_2326 PF02463 RecF/RecN/SMC N terminal domain Pcar_2327 PF01513 ATP-NAD kinase Pcar_2328 PF00004 ATPase family associated with various cellular activities (AAA) Pcar_2328 PF16193 AAA C-terminal domain Pcar_2328 PF12002 MgsA AAA+ ATPase C terminal Pcar_2330 PF00578 AhpC/TSA family Pcar_2331 PF01106 NifU-like domain Pcar_2333 PF03009 Glycerophosphoryl diester phosphodiesterase family Pcar_2334 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Pcar_2335 PF01709 Transcriptional regulator Pcar_2336 PF02075 Crossover junction endodeoxyribonuclease RuvC Pcar_2337 PF07499 RuvA, C-terminal domain Pcar_2337 PF01330 RuvA N terminal domain Pcar_2338 PF17864 RuvB AAA lid domain Pcar_2338 PF05491 RuvB C-terminal winged helix domain Pcar_2338 PF05496 Holliday junction DNA helicase RuvB P-loop domain Pcar_2340 PF01734 Patatin-like phospholipase Pcar_2342 PF03109 ABC1 family Pcar_2343 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase Pcar_2344 PF00989 PAS fold Pcar_2344 PF00512 His Kinase A (phospho-acceptor) domain Pcar_2344 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_2344 PF00672 HAMP domain Pcar_2345 PF00158 Sigma-54 interaction domain Pcar_2345 PF00072 Response regulator receiver domain Pcar_2345 PF02954 Bacterial regulatory protein, Fis family Pcar_2346 PF02915 Rubrerythrin Pcar_2347 PF01880 Desulfoferrodoxin Pcar_2347 PF06397 Desulfoferrodoxin, N-terminal domain Pcar_2348 PF00579 tRNA synthetases class I (W and Y) Pcar_2349 PF13277 YmdB-like protein Pcar_2350 PF12072 Domain of unknown function (DUF3552) Pcar_2350 PF00013 KH domain Pcar_2350 PF01966 HD domain Pcar_2351 PF01812 5-formyltetrahydrofolate cyclo-ligase family Pcar_2354 PF02881 SRP54-type protein, helical bundle domain Pcar_2354 PF00448 SRP54-type protein, GTPase domain Pcar_2356 PF02463 RecF/RecN/SMC N terminal domain Pcar_2356 PF06470 SMC proteins Flexible Hinge Domain Pcar_2357 PF01479 S4 domain Pcar_2357 PF00849 RNA pseudouridylate synthase Pcar_2359 PF01209 ubiE/COQ5 methyltransferase family Pcar_2361 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_2361 PF00672 HAMP domain Pcar_2361 PF13426 PAS domain Pcar_2361 PF00512 His Kinase A (phospho-acceptor) domain Pcar_2362 PF01980 tRNA-methyltransferase O Pcar_2362 PF18389 TrmO C-terminal domain Pcar_2363 PF01584 CheW-like domain Pcar_2364 PF02743 Cache domain Pcar_2364 PF00672 HAMP domain Pcar_2364 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Pcar_2365 PF02954 Bacterial regulatory protein, Fis family Pcar_2365 PF00158 Sigma-54 interaction domain Pcar_2365 PF00072 Response regulator receiver domain Pcar_2366 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_2366 PF00512 His Kinase A (phospho-acceptor) domain Pcar_2366 PF08448 PAS fold Pcar_2366 PF13188 PAS domain Pcar_2366 PF00072 Response regulator receiver domain Pcar_2367 PF00342 Phosphoglucose isomerase Pcar_2368 PF04551 GcpE protein Pcar_2369 PF05958 tRNA (Uracil-5-)-methyltransferase Pcar_2370 PF00313 'Cold-shock' DNA-binding domain Pcar_2373 PF12704 MacB-like periplasmic core domain Pcar_2373 PF02687 FtsX-like permease family Pcar_2373 PF00005 ABC transporter Pcar_2374 PF12704 MacB-like periplasmic core domain Pcar_2374 PF02687 FtsX-like permease family Pcar_2375 PF00005 ABC transporter Pcar_2375 PF02687 FtsX-like permease family Pcar_2375 PF12704 MacB-like periplasmic core domain Pcar_2377 PF00691 OmpA family Pcar_2377 PF05736 OprF membrane domain Pcar_2379 PF03372 Endonuclease/Exonuclease/phosphatase family Pcar_2380 PF09382 RQC domain Pcar_2380 PF00270 DEAD/DEAH box helicase Pcar_2380 PF00271 Helicase conserved C-terminal domain Pcar_2380 PF00570 HRDC domain Pcar_2380 PF16124 RecQ zinc-binding Pcar_2382 PF04545 Sigma-70, region 4 Pcar_2382 PF00140 Sigma-70 factor, region 1.2 Pcar_2382 PF04539 Sigma-70 region 3 Pcar_2382 PF04542 Sigma-70 region 2 Pcar_2384 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Pcar_2384 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Pcar_2386 PF00696 Amino acid kinase family Pcar_2388 PF01494 FAD binding domain Pcar_2390 PF02472 Biopolymer transport protein ExbD/TolR Pcar_2391 PF01618 MotA/TolQ/ExbB proton channel family Pcar_2396 PF12558 ATP-binding cassette cobalt transporter Pcar_2396 PF00005 ABC transporter Pcar_2400 PF00731 AIR carboxylase Pcar_2401 PF01969 Protein of unknown function DUF111 Pcar_2402 PF04608 Phosphatidylglycerophosphatase A Pcar_2403 PF00994 Probable molybdopterin binding domain Pcar_2403 PF02464 Competence-damaged protein Pcar_2404 PF02834 LigT like Phosphoesterase Pcar_2405 PF00154 recA bacterial DNA recombination protein Pcar_2406 PF00437 Type II/IV secretion system protein Pcar_2407 PF02631 RecX family Pcar_2408 PF02272 DHHA1 domain Pcar_2408 PF01411 tRNA synthetases class II (A) Pcar_2408 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Pcar_2411 PF00227 Proteasome subunit Pcar_2412 PF10431 C-terminal, D2-small domain, of ClpB protein Pcar_2412 PF00004 ATPase family associated with various cellular activities (AAA) Pcar_2412 PF07724 AAA domain (Cdc48 subfamily) Pcar_2413 PF00696 Amino acid kinase family Pcar_2414 PF00202 Aminotransferase class-III Pcar_2415 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Pcar_2415 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Pcar_2416 PF06271 RDD family Pcar_2417 PF00764 Arginosuccinate synthase Pcar_2418 PF14698 Argininosuccinate lyase C-terminal Pcar_2418 PF00206 Lyase Pcar_2420 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Pcar_2420 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Pcar_2421 PF00701 Dihydrodipicolinate synthetase family Pcar_2422 PF05173 Dihydrodipicolinate reductase, C-terminus Pcar_2422 PF01113 Dihydrodipicolinate reductase, N-terminus Pcar_2423 PF00155 Aminotransferase class I and II Pcar_2424 PF12146 Serine aminopeptidase, S33 Pcar_2425 PF01609 Transposase DDE domain Pcar_2426 PF07693 KAP family P-loop domain Pcar_2427 PF00871 Acetokinase family Pcar_2430 PF00291 Pyridoxal-phosphate dependent enzyme Pcar_2431 PF02540 NAD synthase Pcar_2434 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Pcar_2435 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Pcar_2435 PF02896 PEP-utilising enzyme, TIM barrel domain Pcar_2435 PF00391 PEP-utilising enzyme, mobile domain Pcar_2437 PF13406 Transglycosylase SLT domain Pcar_2438 PF03618 Kinase/pyrophosphorylase Pcar_2439 PF00459 Inositol monophosphatase family Pcar_2441 PF02913 FAD linked oxidases, C-terminal domain Pcar_2441 PF01565 FAD binding domain Pcar_2442 PF00202 Aminotransferase class-III Pcar_2443 PF01592 NifU-like N terminal domain Pcar_2446 PF03992 Antibiotic biosynthesis monooxygenase Pcar_2447 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Pcar_2447 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Pcar_2449 PF08448 PAS fold Pcar_2449 PF00990 Diguanylate cyclase, GGDEF domain Pcar_2450 PF00330 Aconitase family (aconitate hydratase) Pcar_2451 PF00924 Mechanosensitive ion channel Pcar_2454 PF01252 Signal peptidase (SPase) II Pcar_2455 PF00133 tRNA synthetases class I (I, L, M and V) Pcar_2455 PF08264 Anticodon-binding domain of tRNA Pcar_2455 PF06827 Zinc finger found in FPG and IleRS Pcar_2456 PF06965 Na+/H+ antiporter 1 Pcar_2457 PF03306 Alpha-acetolactate decarboxylase Pcar_2460 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Pcar_2460 PF18267 Rubredoxin NAD+ reductase C-terminal domain Pcar_2460 PF07992 Pyridine nucleotide-disulphide oxidoreductase Pcar_2460 PF04324 BFD-like [2Fe-2S] binding domain Pcar_2461 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Pcar_2461 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Pcar_2462 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Pcar_2462 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Pcar_2466 PF00072 Response regulator receiver domain Pcar_2466 PF00486 Transcriptional regulatory protein, C terminal Pcar_2467 PF02203 Tar ligand binding domain homologue Pcar_2467 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Pcar_2467 PF00672 HAMP domain Pcar_2469 PF00924 Mechanosensitive ion channel Pcar_2469 PF05552 Conserved TM helix Pcar_2470 PF08482 ATP-dependent helicase C-terminal Pcar_2470 PF00270 DEAD/DEAH box helicase Pcar_2470 PF04408 Helicase associated domain (HA2) Pcar_2470 PF00271 Helicase conserved C-terminal domain Pcar_2471 PF07687 Peptidase dimerisation domain Pcar_2471 PF01546 Peptidase family M20/M25/M40 Pcar_2472 PF01551 Peptidase family M23 Pcar_2472 PF08460 Bacterial SH3 domain Pcar_2478 PF01883 Iron-sulfur cluster assembly protein Pcar_2478 PF10609 NUBPL iron-transfer P-loop NTPase Pcar_2481 PF09186 Domain of unknown function (DUF1949) Pcar_2481 PF01205 Uncharacterized protein family UPF0029 Pcar_2483 PF01925 Sulfite exporter TauE/SafE Pcar_2484 PF00149 Calcineurin-like phosphoesterase Pcar_2486 PF01464 Transglycosylase SLT domain Pcar_2487 PF04055 Radical SAM superfamily Pcar_2487 PF06969 HemN C-terminal domain Pcar_2489 PF01132 Elongation factor P (EF-P) OB domain Pcar_2489 PF08207 Elongation factor P (EF-P) KOW-like domain Pcar_2489 PF09285 Elongation factor P, C-terminal Pcar_2490 PF00152 tRNA synthetases class II (D, K and N) Pcar_2491 PF01739 CheR methyltransferase, SAM binding domain Pcar_2491 PF03705 CheR methyltransferase, all-alpha domain Pcar_2492 PF01235 Sodium:alanine symporter family Pcar_2494 PF02641 Uncharacterized ACR, COG1993 Pcar_2495 PF01137 RNA 3'-terminal phosphate cyclase Pcar_2495 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain Pcar_2499 PF01590 GAF domain Pcar_2499 PF00563 EAL domain Pcar_2499 PF00990 Diguanylate cyclase, GGDEF domain Pcar_2499 PF00360 Phytochrome region Pcar_2500 PF07729 FCD domain Pcar_2500 PF00392 Bacterial regulatory proteins, gntR family Pcar_2502 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Pcar_2502 PF00037 4Fe-4S binding domain Pcar_2502 PF02256 Iron hydrogenase small subunit Pcar_2502 PF02906 Iron only hydrogenase large subunit, C-terminal domain Pcar_2503 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Pcar_2503 PF07992 Pyridine nucleotide-disulphide oxidoreductase Pcar_2503 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Pcar_2505 PF00171 Aldehyde dehydrogenase family Pcar_2506 PF00465 Iron-containing alcohol dehydrogenase Pcar_2508 PF02641 Uncharacterized ACR, COG1993 Pcar_2510 PF00465 Iron-containing alcohol dehydrogenase Pcar_2513 PF00899 ThiF family Pcar_2514 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Pcar_2514 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Pcar_2515 PF06463 Molybdenum Cofactor Synthesis C Pcar_2515 PF04055 Radical SAM superfamily Pcar_2516 PF03061 Thioesterase superfamily Pcar_2518 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Pcar_2518 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Pcar_2519 PF03466 LysR substrate binding domain Pcar_2519 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Pcar_2520 PF04055 Radical SAM superfamily Pcar_2520 PF12544 Lysine-2,3-aminomutase Pcar_2526 PF00115 Cytochrome C and Quinol oxidase polypeptide I Pcar_2527 PF00510 Cytochrome c oxidase subunit III Pcar_2529 PF02790 Cytochrome C oxidase subunit II, transmembrane domain Pcar_2529 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Pcar_2530 PF01040 UbiA prenyltransferase family Pcar_2531 PF02254 TrkA-N domain Pcar_2531 PF07885 Ion channel Pcar_2532 PF03462 PCRF domain Pcar_2532 PF00472 RF-1 domain Pcar_2534 PF01327 Polypeptide deformylase Pcar_2535 PF00403 Heavy-metal-associated domain Pcar_2535 PF07992 Pyridine nucleotide-disulphide oxidoreductase Pcar_2535 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pcar_2536 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Pcar_2537 PF01048 Phosphorylase superfamily Pcar_2538 PF00072 Response regulator receiver domain Pcar_2538 PF00990 Diguanylate cyclase, GGDEF domain Pcar_2539 PF09723 Zinc ribbon domain Pcar_2540 PF01597 Glycine cleavage H-protein Pcar_2542 PF01515 Phosphate acetyl/butaryl transferase Pcar_2543 PF00871 Acetokinase family Pcar_2547 PF11734 TilS substrate C-terminal domain Pcar_2547 PF01171 PP-loop family Pcar_2547 PF00156 Phosphoribosyl transferase domain Pcar_2551 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Pcar_2551 PF00384 Molybdopterin oxidoreductase Pcar_2551 PF01568 Molydopterin dinucleotide binding domain Pcar_2555 PF00210 Ferritin-like domain Pcar_2557 PF00912 Transglycosylase Pcar_2557 PF00905 Penicillin binding protein transpeptidase domain Pcar_2557 PF14814 Bifunctional transglycosylase second domain Pcar_2558 PF00563 EAL domain Pcar_2558 PF00990 Diguanylate cyclase, GGDEF domain Pcar_2558 PF03707 Bacterial signalling protein N terminal repeat Pcar_2560 PF02690 Na+/Pi-cotransporter Pcar_2563 PF02540 NAD synthase Pcar_2563 PF00958 GMP synthase C terminal domain Pcar_2563 PF00117 Glutamine amidotransferase class-I Pcar_2565 PF03707 Bacterial signalling protein N terminal repeat Pcar_2565 PF00990 Diguanylate cyclase, GGDEF domain Pcar_2565 PF00563 EAL domain Pcar_2566 PF00072 Response regulator receiver domain Pcar_2567 PF00672 HAMP domain Pcar_2567 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_2567 PF00512 His Kinase A (phospho-acceptor) domain Pcar_2572 PF10576 Iron-sulfur binding domain of endonuclease III Pcar_2572 PF00633 Helix-hairpin-helix motif Pcar_2572 PF00730 HhH-GPD superfamily base excision DNA repair protein Pcar_2573 PF00156 Phosphoribosyl transferase domain Pcar_2574 PF06415 BPG-independent PGAM N-terminus (iPGM_N) Pcar_2574 PF01676 Metalloenzyme superfamily Pcar_2576 PF02590 Predicted SPOUT methyltransferase Pcar_2578 PF01467 Cytidylyltransferase-like Pcar_2579 PF00171 Aldehyde dehydrogenase family Pcar_2580 PF00696 Amino acid kinase family Pcar_2580 PF01472 PUA domain Pcar_2581 PF01926 50S ribosome-binding GTPase Pcar_2581 PF01018 GTP1/OBG Pcar_2582 PF01016 Ribosomal L27 protein Pcar_2583 PF00829 Ribosomal prokaryotic L21 protein Pcar_2584 PF00575 S1 RNA binding domain Pcar_2584 PF10150 Ribonuclease E/G family Pcar_2586 PF02811 PHP domain Pcar_2588 PF01063 Amino-transferase class IV Pcar_2589 PF00909 Ammonium Transporter Family Pcar_2592 PF00535 Glycosyl transferase family 2 Pcar_2593 PF16363 GDP-mannose 4,6 dehydratase Pcar_2594 PF04321 RmlD substrate binding domain Pcar_2595 PF00483 Nucleotidyl transferase Pcar_2596 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Pcar_2597 PF13439 Glycosyltransferase Family 4 Pcar_2597 PF00534 Glycosyl transferases group 1 Pcar_2599 PF01645 Conserved region in glutamate synthase Pcar_2600 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Pcar_2600 PF07992 Pyridine nucleotide-disulphide oxidoreductase Pcar_2602 PF01451 Low molecular weight phosphotyrosine protein phosphatase Pcar_2604 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Pcar_2604 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Pcar_2605 PF01636 Phosphotransferase enzyme family Pcar_2607 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Pcar_2607 PF02203 Tar ligand binding domain homologue Pcar_2607 PF00672 HAMP domain Pcar_2608 PF01883 Iron-sulfur cluster assembly protein Pcar_2611 PF01625 Peptide methionine sulfoxide reductase Pcar_2611 PF01641 SelR domain Pcar_2613 PF00929 Exonuclease Pcar_2613 PF14480 DNA polymerase III polC-type N-terminus I Pcar_2613 PF11490 DNA polymerase III polC-type N-terminus II Pcar_2613 PF07733 Bacterial DNA polymerase III alpha NTPase domain Pcar_2613 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Pcar_2613 PF14579 Helix-hairpin-helix motif Pcar_2613 PF02811 PHP domain Pcar_2614 PF00557 Metallopeptidase family M24 Pcar_2617 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) Pcar_2619 PF00361 Proton-conducting membrane transporter Pcar_2620 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Pcar_2621 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter Pcar_2622 PF13244 Domain of unknown function (DUF4040) Pcar_2622 PF00361 Proton-conducting membrane transporter Pcar_2622 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Pcar_2623 PF00582 Universal stress protein family Pcar_2624 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Pcar_2624 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Pcar_2625 PF07690 Major Facilitator Superfamily Pcar_2626 PF01048 Phosphorylase superfamily Pcar_2626 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus Pcar_2629 PF00072 Response regulator receiver domain Pcar_2629 PF00486 Transcriptional regulatory protein, C terminal Pcar_2630 PF00672 HAMP domain Pcar_2630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_2630 PF00512 His Kinase A (phospho-acceptor) domain Pcar_2630 PF13426 PAS domain Pcar_2632 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 Pcar_2634 PF00005 ABC transporter Pcar_2634 PF12848 ABC transporter Pcar_2639 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Pcar_2639 PF03466 LysR substrate binding domain Pcar_2646 PF08328 Adenylosuccinate lyase C-terminal Pcar_2646 PF00206 Lyase Pcar_2647 PF17783 CvfB-like winged helix domain Pcar_2647 PF13509 S1 domain Pcar_2648 PF00501 AMP-binding enzyme Pcar_2648 PF13193 AMP-binding enzyme C-terminal domain Pcar_2650 PF00109 Beta-ketoacyl synthase, N-terminal domain Pcar_2650 PF02801 Beta-ketoacyl synthase, C-terminal domain Pcar_2651 PF00550 Phosphopantetheine attachment site Pcar_2653 PF00535 Glycosyl transferase family 2 Pcar_2658 PF03548 Outer membrane lipoprotein carrier protein LolA Pcar_2660 PF06463 Molybdenum Cofactor Synthesis C Pcar_2660 PF04055 Radical SAM superfamily Pcar_2663 PF00550 Phosphopantetheine attachment site Pcar_2664 PF00109 Beta-ketoacyl synthase, N-terminal domain Pcar_2664 PF02801 Beta-ketoacyl synthase, C-terminal domain Pcar_2665 PF01134 Glucose inhibited division protein A Pcar_2665 PF13932 GidA associated domain Pcar_2666 PF00109 Beta-ketoacyl synthase, N-terminal domain Pcar_2666 PF02801 Beta-ketoacyl synthase, C-terminal domain Pcar_2669 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Pcar_2671 PF08241 Methyltransferase domain Pcar_2672 PF00575 S1 RNA binding domain Pcar_2673 PF00293 NUDIX domain Pcar_2673 PF09297 NADH pyrophosphatase zinc ribbon domain Pcar_2677 PF01784 NIF3 (NGG1p interacting factor 3) Pcar_2678 PF04546 Sigma-70, non-essential region Pcar_2678 PF03979 Sigma-70 factor, region 1.1 Pcar_2678 PF00140 Sigma-70 factor, region 1.2 Pcar_2678 PF04542 Sigma-70 region 2 Pcar_2678 PF04539 Sigma-70 region 3 Pcar_2678 PF04545 Sigma-70, region 4 Pcar_2679 PF01807 CHC2 zinc finger Pcar_2679 PF13662 Toprim domain Pcar_2679 PF08278 DNA primase DnaG DnaB-binding Pcar_2679 PF10410 DnaB-helicase binding domain of primase Pcar_2679 PF08275 DNA primase catalytic core, N-terminal domain Pcar_2680 PF00488 MutS domain V Pcar_2680 PF01713 Smr domain Pcar_2681 PF02674 Colicin V production protein Pcar_2683 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Pcar_2684 PF00977 Histidine biosynthesis protein Pcar_2685 PF00977 Histidine biosynthesis protein Pcar_2686 PF00117 Glutamine amidotransferase class-I Pcar_2687 PF00475 Imidazoleglycerol-phosphate dehydratase Pcar_2688 PF00815 Histidinol dehydrogenase Pcar_2689 PF01634 ATP phosphoribosyltransferase Pcar_2690 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Pcar_2691 PF05175 Methyltransferase small domain Pcar_2691 PF17827 PrmC N-terminal domain Pcar_2692 PF00472 RF-1 domain Pcar_2692 PF03462 PCRF domain Pcar_2693 PF02511 Thymidylate synthase complementing protein Pcar_2694 PF01197 Ribosomal protein L31 Pcar_2695 PF07497 Rho termination factor, RNA-binding domain Pcar_2695 PF07498 Rho termination factor, N-terminal domain Pcar_2695 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Pcar_2698 PF00749 tRNA synthetases class I (E and Q), catalytic domain Pcar_2700 PF01209 ubiE/COQ5 methyltransferase family Pcar_2701 PF00384 Molybdopterin oxidoreductase Pcar_2701 PF01568 Molydopterin dinucleotide binding domain Pcar_2704 PF00005 ABC transporter Pcar_2708 PF00037 4Fe-4S binding domain Pcar_2708 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Pcar_2708 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Pcar_2709 PF00563 EAL domain Pcar_2709 PF00990 Diguanylate cyclase, GGDEF domain Pcar_2709 PF08448 PAS fold Pcar_2709 PF08447 PAS fold Pcar_2710 PF12282 Signal transduction histidine kinase Pcar_2710 PF07568 Histidine kinase Pcar_2710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_2711 PF00072 Response regulator receiver domain Pcar_2713 PF01544 CorA-like Mg2+ transporter protein Pcar_2714 PF07693 KAP family P-loop domain Pcar_2715 PF00924 Mechanosensitive ion channel Pcar_2717 PF03099 Biotin/lipoate A/B protein ligase family Pcar_2717 PF12706 Beta-lactamase superfamily domain Pcar_2718 PF00072 Response regulator receiver domain Pcar_2718 PF02954 Bacterial regulatory protein, Fis family Pcar_2718 PF00158 Sigma-54 interaction domain Pcar_2719 PF02780 Transketolase, C-terminal domain Pcar_2719 PF02779 Transketolase, pyrimidine binding domain Pcar_2720 PF02779 Transketolase, pyrimidine binding domain Pcar_2720 PF02780 Transketolase, C-terminal domain Pcar_2720 PF00456 Transketolase, thiamine diphosphate binding domain Pcar_2722 PF02310 B12 binding domain Pcar_2722 PF02607 B12 binding domain Pcar_2722 PF02965 Vitamin B12 dependent methionine synthase, activation domain Pcar_2722 PF00809 Pterin binding enzyme Pcar_2722 PF02574 Homocysteine S-methyltransferase Pcar_2724 PF01177 Asp/Glu/Hydantoin racemase Pcar_2727 PF01869 BadF/BadG/BcrA/BcrD ATPase family Pcar_2729 PF08774 VRR-NUC domain Pcar_2729 PF04851 Type III restriction enzyme, res subunit Pcar_2739 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Pcar_2742 PF01926 50S ribosome-binding GTPase Pcar_2746 PF03205 Molybdopterin guanine dinucleotide synthesis protein B Pcar_2747 PF13472 GDSL-like Lipase/Acylhydrolase family Pcar_2748 PF16998 17 kDa outer membrane surface antigen Pcar_2748 PF05433 Glycine zipper 2TM domain Pcar_2749 PF02405 Permease MlaE Pcar_2750 PF00005 ABC transporter Pcar_2753 PF11849 Domain of unknown function (DUF3369) Pcar_2754 PF00186 Dihydrofolate reductase Pcar_2758 PF00171 Aldehyde dehydrogenase family Pcar_2758 PF00465 Iron-containing alcohol dehydrogenase Pcar_2759 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_2759 PF00512 His Kinase A (phospho-acceptor) domain Pcar_2759 PF00989 PAS fold Pcar_2760 PF01258 Prokaryotic dksA/traR C4-type zinc finger Pcar_2762 PF01967 MoaC family Pcar_2764 PF18073 Rubredoxin metal binding domain Pcar_2765 PF02913 FAD linked oxidases, C-terminal domain Pcar_2765 PF01565 FAD binding domain Pcar_2766 PF13183 4Fe-4S dicluster domain Pcar_2766 PF02754 Cysteine-rich domain Pcar_2768 PF06463 Molybdenum Cofactor Synthesis C Pcar_2768 PF04055 Radical SAM superfamily Pcar_2770 PF00118 TCP-1/cpn60 chaperonin family Pcar_2771 PF00166 Chaperonin 10 Kd subunit Pcar_2772 PF00266 Aminotransferase class-V Pcar_2773 PF05154 TM2 domain Pcar_2774 PF00158 Sigma-54 interaction domain Pcar_2774 PF02954 Bacterial regulatory protein, Fis family Pcar_2774 PF13185 GAF domain Pcar_2776 PF13193 AMP-binding enzyme C-terminal domain Pcar_2776 PF00501 AMP-binding enzyme Pcar_2776 PF01553 Acyltransferase Pcar_2777 PF01066 CDP-alcohol phosphatidyltransferase Pcar_2779 PF01553 Acyltransferase Pcar_2780 PF12146 Serine aminopeptidase, S33 Pcar_2780 PF12147 Putative methyltransferase Pcar_2784 PF00005 ABC transporter Pcar_2784 PF08402 TOBE domain Pcar_2785 PF03741 Integral membrane protein TerC family Pcar_2790 PF00535 Glycosyl transferase family 2 Pcar_2791 PF14883 Hypothetical glycosyl hydrolase family 13 Pcar_2791 PF01522 Polysaccharide deacetylase Pcar_2793 PF00580 UvrD/REP helicase N-terminal domain Pcar_2793 PF13361 UvrD-like helicase C-terminal domain Pcar_2794 PF00654 Voltage gated chloride channel Pcar_2795 PF00258 Flavodoxin Pcar_2795 PF00753 Metallo-beta-lactamase superfamily Pcar_2796 PF00301 Rubredoxin Pcar_2797 PF02915 Rubrerythrin Pcar_2798 PF01475 Ferric uptake regulator family Pcar_2804 PF01791 DeoC/LacD family aldolase Pcar_2806 PF00313 'Cold-shock' DNA-binding domain Pcar_2811 PF06744 Type VI secretion protein IcmF C-terminal Pcar_2811 PF06761 Intracellular multiplication and human macrophage-killing Pcar_2811 PF14331 ImcF-related N-terminal domain Pcar_2815 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath Pcar_2816 PF05638 Type VI secretion system effector, Hcp Pcar_2818 PF05947 Type VI secretion system, TssF Pcar_2820 PF00004 ATPase family associated with various cellular activities (AAA) Pcar_2820 PF07724 AAA domain (Cdc48 subfamily) Pcar_2820 PF17871 AAA lid domain Pcar_2820 PF10431 C-terminal, D2-small domain, of ClpB protein Pcar_2821 PF16671 Actin cross-linking domain Pcar_2821 PF04717 Type VI secretion system, phage-baseplate injector Pcar_2822 PF06715 Gp5 C-terminal repeat (3 copies) Pcar_2822 PF04717 Type VI secretion system, phage-baseplate injector Pcar_2833 PF13276 HTH-like domain Pcar_2833 PF00665 Integrase core domain Pcar_2833 PF13333 Integrase core domain Pcar_2835 PF01139 tRNA-splicing ligase RtcB Pcar_2836 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain Pcar_2836 PF01137 RNA 3'-terminal phosphate cyclase Pcar_2838 PF00158 Sigma-54 interaction domain Pcar_2838 PF06956 Regulator of RNA terminal phosphate cyclase Pcar_2839 PF01022 Bacterial regulatory protein, arsR family Pcar_2843 PF02566 OsmC-like protein Pcar_2847 PF00465 Iron-containing alcohol dehydrogenase Pcar_2848 PF00465 Iron-containing alcohol dehydrogenase Pcar_2849 PF02954 Bacterial regulatory protein, Fis family Pcar_2849 PF00072 Response regulator receiver domain Pcar_2849 PF00158 Sigma-54 interaction domain Pcar_2850 PF01515 Phosphate acetyl/butaryl transferase Pcar_2851 PF00465 Iron-containing alcohol dehydrogenase Pcar_2851 PF00171 Aldehyde dehydrogenase family Pcar_2852 PF00871 Acetokinase family Pcar_2854 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_2854 PF00512 His Kinase A (phospho-acceptor) domain Pcar_2854 PF00989 PAS fold Pcar_2856 PF04143 Sulphur transport Pcar_2858 PF00205 Thiamine pyrophosphate enzyme, central domain Pcar_2858 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Pcar_2858 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Pcar_2860 PF00534 Glycosyl transferases group 1 Pcar_2860 PF13439 Glycosyltransferase Family 4 Pcar_2862 PF06794 Uncharacterised protein family (UPF0270) Pcar_2864 PF01612 3'-5' exonuclease Pcar_2864 PF00476 DNA polymerase family A Pcar_2864 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Pcar_2864 PF01367 5'-3' exonuclease, C-terminal SAM fold Pcar_2866 PF02335 Cytochrome c552 Pcar_2867 PF03264 NapC/NirT cytochrome c family, N-terminal region Pcar_2871 PF00301 Rubredoxin Pcar_2871 PF00753 Metallo-beta-lactamase superfamily Pcar_2871 PF00258 Flavodoxin Pcar_2872 PF03063 Prismane/CO dehydrogenase family Pcar_2875 PF02687 FtsX-like permease family Pcar_2875 PF12704 MacB-like periplasmic core domain Pcar_2875 PF00005 ABC transporter Pcar_2877 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Pcar_2878 PF00440 Bacterial regulatory proteins, tetR family Pcar_2879 PF18267 Rubredoxin NAD+ reductase C-terminal domain Pcar_2879 PF07992 Pyridine nucleotide-disulphide oxidoreductase Pcar_2879 PF13806 Rieske-like [2Fe-2S] domain Pcar_2879 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Pcar_2879 PF04324 BFD-like [2Fe-2S] binding domain Pcar_2879 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Pcar_2880 PF05698 Bacterial trigger factor protein (TF) C-terminus Pcar_2881 PF10672 S-adenosylmethionine-dependent methyltransferase Pcar_2881 PF02926 THUMP domain Pcar_2881 PF01170 Putative RNA methylase family UPF0020 Pcar_2883 PF02810 SEC-C motif Pcar_2884 PF04055 Radical SAM superfamily Pcar_2884 PF06463 Molybdenum Cofactor Synthesis C Pcar_2903 PF03193 RsgA GTPase Pcar_2907 PF05853 beta-keto acid cleavage enzyme Pcar_2909 PF13533 Biotin-lipoyl like Pcar_2910 PF07869 Protein of unknown function (DUF1656) Pcar_2911 PF04632 Fusaric acid resistance protein family Pcar_2912 PF02321 Outer membrane efflux protein Pcar_2914 PF13361 UvrD-like helicase C-terminal domain Pcar_2914 PF00580 UvrD/REP helicase N-terminal domain Pcar_2914 PF12705 PD-(D/E)XK nuclease superfamily Pcar_2923 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) Pcar_2923 PF18766 SWI2/SNF2 ATPase Pcar_2923 PF11867 Domain of unknown function (DUF3387) Pcar_2925 PF02384 N-6 DNA Methylase Pcar_2927 PF02384 N-6 DNA Methylase Pcar_2930 PF13401 AAA domain Pcar_2930 PF11426 Tn7 transposition regulator TnsC Pcar_2931 PF00665 Integrase core domain Pcar_2932 PF08721 TnsA endonuclease C terminal Pcar_2932 PF08722 TnsA endonuclease N terminal Pcar_2933 PF01380 SIS domain Pcar_2934 PF00132 Bacterial transferase hexapeptide (six repeats) Pcar_2934 PF12804 MobA-like NTP transferase domain Pcar_2937 PF00563 EAL domain Pcar_2937 PF00990 Diguanylate cyclase, GGDEF domain Pcar_2937 PF03707 Bacterial signalling protein N terminal repeat Pcar_2938 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_2938 PF00512 His Kinase A (phospho-acceptor) domain Pcar_2938 PF09308 LuxQ, periplasmic Pcar_2938 PF00072 Response regulator receiver domain Pcar_2939 PF00484 Carbonic anhydrase Pcar_2940 PF16078 2-oxoglutarate dehydrogenase N-terminus Pcar_2940 PF00676 Dehydrogenase E1 component Pcar_2940 PF16870 2-oxoglutarate dehydrogenase C-terminal Pcar_2940 PF02779 Transketolase, pyrimidine binding domain Pcar_2941 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Pcar_2941 PF00364 Biotin-requiring enzyme Pcar_2941 PF02817 e3 binding domain Pcar_2943 PF07992 Pyridine nucleotide-disulphide oxidoreductase Pcar_2944 PF01493 GXGXG motif Pcar_2944 PF01645 Conserved region in glutamate synthase Pcar_2944 PF04898 Glutamate synthase central domain Pcar_2944 PF00310 Glutamine amidotransferases class-II Pcar_2947 PF13419 Haloacid dehalogenase-like hydrolase Pcar_2948 PF13180 PDZ domain Pcar_2948 PF17820 PDZ domain Pcar_2950 PF01479 S4 domain Pcar_2950 PF00849 RNA pseudouridylate synthase Pcar_2951 PF02578 Multi-copper polyphenol oxidoreductase laccase Pcar_2954 PF08323 Starch synthase catalytic domain Pcar_2954 PF00534 Glycosyl transferases group 1 Pcar_2958 PF00483 Nucleotidyl transferase Pcar_2959 PF00072 Response regulator receiver domain Pcar_2959 PF00486 Transcriptional regulatory protein, C terminal Pcar_2960 PF16199 Radical_SAM C-terminal domain Pcar_2960 PF04055 Radical SAM superfamily Pcar_2961 PF13361 UvrD-like helicase C-terminal domain Pcar_2961 PF00580 UvrD/REP helicase N-terminal domain Pcar_2963 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV Pcar_2967 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Pcar_2967 PF00672 HAMP domain Pcar_2967 PF02743 Cache domain Pcar_2969 PF00795 Carbon-nitrogen hydrolase Pcar_2970 PF07715 TonB-dependent Receptor Plug Domain Pcar_2970 PF00593 TonB dependent receptor Pcar_2972 PF02469 Fasciclin domain Pcar_2974 PF00691 OmpA family Pcar_2975 PF04052 TolB amino-terminal domain Pcar_2975 PF07676 WD40-like Beta Propeller Repeat Pcar_2977 PF02472 Biopolymer transport protein ExbD/TolR Pcar_2978 PF01618 MotA/TolQ/ExbB proton channel family Pcar_2979 PF13291 ACT domain Pcar_2979 PF00291 Pyridoxal-phosphate dependent enzyme Pcar_2981 PF02649 Type I GTP cyclohydrolase folE2 Pcar_2982 PF06508 Queuosine biosynthesis protein QueC Pcar_2983 PF00391 PEP-utilising enzyme, mobile domain Pcar_2983 PF00224 Pyruvate kinase, barrel domain Pcar_2983 PF02887 Pyruvate kinase, alpha/beta domain Pcar_2987 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Pcar_2987 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Pcar_2988 PF12795 Mechanosensitive ion channel porin domain Pcar_2988 PF12794 Mechanosensitive ion channel inner membrane domain 1 Pcar_2988 PF00924 Mechanosensitive ion channel Pcar_2989 PF02874 ATP synthase alpha/beta family, beta-barrel domain Pcar_2989 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Pcar_2993 PF00119 ATP synthase A chain Pcar_2994 PF00137 ATP synthase subunit C Pcar_2995 PF00430 ATP synthase B/B' CF(0) Pcar_2996 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Pcar_2996 PF02874 ATP synthase alpha/beta family, beta-barrel domain Pcar_2996 PF00306 ATP synthase alpha/beta chain, C terminal domain Pcar_2997 PF00231 ATP synthase Pcar_3000 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Pcar_3000 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Pcar_3001 PF00873 AcrB/AcrD/AcrF family Pcar_3002 PF13533 Biotin-lipoyl like Pcar_3004 PF01047 MarR family Pcar_3005 PF00291 Pyridoxal-phosphate dependent enzyme Pcar_3006 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Pcar_3011 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Pcar_3011 PF00391 PEP-utilising enzyme, mobile domain Pcar_3014 PF00899 ThiF family Pcar_3015 PF01026 TatD related DNase Pcar_3019 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Pcar_3019 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Pcar_3023 PF01863 Protein of unknown function DUF45 Pcar_3024 PF00950 ABC 3 transport family Pcar_3025 PF00005 ABC transporter Pcar_3027 PF01914 MarC family integral membrane protein Pcar_3029 PF01914 MarC family integral membrane protein Pcar_3030 PF00596 Class II Aldolase and Adducin N-terminal domain Pcar_3031 PF00155 Aminotransferase class I and II Pcar_3036 PF13419 Haloacid dehalogenase-like hydrolase Pcar_3045 PF00990 Diguanylate cyclase, GGDEF domain Pcar_3045 PF00360 Phytochrome region Pcar_3045 PF00563 EAL domain Pcar_3045 PF01590 GAF domain Pcar_3046 PF13847 Methyltransferase domain Pcar_3055 PF03707 Bacterial signalling protein N terminal repeat Pcar_3055 PF00990 Diguanylate cyclase, GGDEF domain Pcar_3055 PF00563 EAL domain Pcar_3057 PF00005 ABC transporter Pcar_3058 PF01032 FecCD transport family Pcar_3059 PF00675 Insulinase (Peptidase family M16) Pcar_3059 PF05193 Peptidase M16 inactive domain Pcar_3061 PF00490 Delta-aminolevulinic acid dehydratase Pcar_3062 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Pcar_3062 PF02602 Uroporphyrinogen-III synthase HemD Pcar_3063 PF03900 Porphobilinogen deaminase, C-terminal domain Pcar_3063 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Pcar_3064 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Pcar_3064 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Pcar_3064 PF01488 Shikimate / quinate 5-dehydrogenase Pcar_3065 PF01578 Cytochrome C assembly protein Pcar_3066 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Pcar_3066 PF14824 Sirohaem biosynthesis protein central Pcar_3066 PF10414 Sirohaem synthase dimerisation region Pcar_3067 PF13580 SIS domain Pcar_3068 PF00085 Thioredoxin Pcar_3069 PF04751 Protein of unknown function (DUF615) Pcar_3070 PF02580 D-Tyr-tRNA(Tyr) deacylase Pcar_3071 PF01261 Xylose isomerase-like TIM barrel Pcar_3074 PF01678 Diaminopimelate epimerase Pcar_3076 PF00753 Metallo-beta-lactamase superfamily Pcar_3076 PF16123 Hydroxyacylglutathione hydrolase C-terminus Pcar_3079 PF04452 RNA methyltransferase Pcar_3081 PF00486 Transcriptional regulatory protein, C terminal Pcar_3081 PF00072 Response regulator receiver domain Pcar_3082 PF00512 His Kinase A (phospho-acceptor) domain Pcar_3082 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_3082 PF00672 HAMP domain Pcar_3083 PF13180 PDZ domain Pcar_3084 PF12706 Beta-lactamase superfamily domain Pcar_3085 PF07730 Histidine kinase Pcar_3085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_3086 PF00072 Response regulator receiver domain Pcar_3086 PF00196 Bacterial regulatory proteins, luxR family Pcar_3087 PF02589 LUD domain Pcar_3090 PF01594 AI-2E family transporter Pcar_3091 PF01654 Cytochrome bd terminal oxidase subunit I Pcar_3092 PF02322 Cytochrome bd terminal oxidase subunit II Pcar_3093 PF02321 Outer membrane efflux protein Pcar_3094 PF13533 Biotin-lipoyl like Pcar_3095 PF00873 AcrB/AcrD/AcrF family Pcar_3096 PF00440 Bacterial regulatory proteins, tetR family Pcar_3096 PF08361 MAATS-type transcriptional repressor, C-terminal region Pcar_3101 PF12626 Polymerase A arginine-rich C-terminus Pcar_3101 PF12627 Probable RNA and SrmB- binding site of polymerase A Pcar_3101 PF01743 Poly A polymerase head domain Pcar_3103 PF05378 Hydantoinase/oxoprolinase N-terminal region Pcar_3103 PF01968 Hydantoinase/oxoprolinase Pcar_3104 PF02538 Hydantoinase B/oxoprolinase Pcar_3105 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Pcar_3106 PF12557 Cob(I)alamin adenosyltransferase N terminal Pcar_3106 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Pcar_3111 PF00534 Glycosyl transferases group 1 Pcar_3112 PF00982 Glycosyltransferase family 20 Pcar_3113 PF18152 DAHP synthase ferredoxin-like domain Pcar_3113 PF00793 DAHP synthetase I family Pcar_3115 PF01842 ACT domain Pcar_3115 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Pcar_3115 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Pcar_3116 PF02621 Menaquinone biosynthesis Pcar_3117 PF01048 Phosphorylase superfamily Pcar_3124 PF08281 Sigma-70, region 4 Pcar_3124 PF04542 Sigma-70 region 2 Pcar_3125 PF00456 Transketolase, thiamine diphosphate binding domain Pcar_3125 PF02780 Transketolase, C-terminal domain Pcar_3125 PF02779 Transketolase, pyrimidine binding domain Pcar_3126 PF04107 Glutamate-cysteine ligase family 2(GCS2) Pcar_3129 PF00817 impB/mucB/samB family Pcar_3129 PF11799 impB/mucB/samB family C-terminal domain Pcar_3130 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Pcar_3130 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Pcar_3131 PF02874 ATP synthase alpha/beta family, beta-barrel domain Pcar_3131 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Pcar_3132 PF00231 ATP synthase Pcar_3133 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Pcar_3133 PF00306 ATP synthase alpha/beta chain, C terminal domain Pcar_3133 PF02874 ATP synthase alpha/beta family, beta-barrel domain Pcar_3134 PF00213 ATP synthase delta (OSCP) subunit Pcar_3135 PF00430 ATP synthase B/B' CF(0) Pcar_3138 PF17762 HTH domain found in ParB protein Pcar_3138 PF02195 ParB-like nuclease domain Pcar_3139 PF13614 AAA domain Pcar_3140 PF02527 rRNA small subunit methyltransferase G Pcar_3141 PF01134 Glucose inhibited division protein A Pcar_3141 PF13932 GidA associated domain Pcar_3142 PF01926 50S ribosome-binding GTPase Pcar_3142 PF12631 MnmE helical domain Pcar_3142 PF10396 GTP-binding protein TrmE N-terminus Pcar_3143 PF02096 60Kd inner membrane protein Pcar_3143 PF14849 YidC periplasmic domain Pcar_3144 PF01809 Putative membrane protein insertion efficiency factor Pcar_3145 PF00825 Ribonuclease P Pcar_3146 PF00468 Ribosomal protein L34 Pcar_3147 PF00672 HAMP domain Pcar_3147 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pcar_3147 PF00512 His Kinase A (phospho-acceptor) domain Pcar_3147 PF13426 PAS domain Pcar_3148 PF03060 Nitronate monooxygenase Pcar_3149 PF04055 Radical SAM superfamily Pcar_3149 PF13186 Iron-sulfur cluster-binding domain Pcar_3311 PF08334 Type II secretion system (T2SS), protein G Pcar_3311 PF07963 Prokaryotic N-terminal methylation motif Pcar_3370 PF02416 mttA/Hcf106 family