locus-tag class description Slip_0001 PF11638 DnaA N-terminal domain Slip_0001 PF08299 Bacterial dnaA protein helix-turn-helix Slip_0001 PF00308 Bacterial dnaA protein Slip_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain Slip_0002 PF02767 DNA polymerase III beta subunit, central domain Slip_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain Slip_0003 PF02463 RecF/RecN/SMC N terminal domain Slip_0004 PF04025 Domain of unknown function (DUF370) Slip_0005 PF01751 Toprim domain Slip_0005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Slip_0005 PF00986 DNA gyrase B subunit, carboxyl terminus Slip_0005 PF00204 DNA gyrase B Slip_0006 PF00521 DNA gyrase/topoisomerase IV, subunit A Slip_0006 PF03989 DNA gyrase C-terminal domain, beta-propeller Slip_0007 PF01680 SOR/SNZ family Slip_0008 PF01174 SNO glutamine amidotransferase family Slip_0009 PF00266 Aminotransferase class-V Slip_0010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Slip_0010 PF01842 ACT domain Slip_0010 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Slip_0011 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Slip_0011 PF02403 Seryl-tRNA synthetase N-terminal domain Slip_0012 PF14437 MafB19-like deaminase Slip_0016 PF11849 Domain of unknown function (DUF3369) Slip_0017 PF01814 Hemerythrin HHE cation binding domain Slip_0020 PF01061 ABC-2 type transporter Slip_0021 PF00005 ABC transporter Slip_0025 PF13181 Tetratricopeptide repeat Slip_0025 PF00535 Glycosyl transferase family 2 Slip_0030 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Slip_0031 PF00132 Bacterial transferase hexapeptide (six repeats) Slip_0033 PF04143 Sulphur transport Slip_0034 PF12169 DNA polymerase III subunits gamma and tau domain III Slip_0035 PF02575 YbaB/EbfC DNA-binding family Slip_0036 PF13662 Toprim domain Slip_0036 PF02132 RecR protein Slip_0036 PF00633 Helix-hairpin-helix motif Slip_0043 PF13187 4Fe-4S dicluster domain Slip_0045 PF01276 Orn/Lys/Arg decarboxylase, major domain Slip_0045 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Slip_0046 PF02223 Thymidylate kinase Slip_0048 PF12170 DNA polymerase III tau subunit V interacting with alpha Slip_0048 PF12169 DNA polymerase III subunits gamma and tau domain III Slip_0048 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding Slip_0049 PF04468 PSP1 C-terminal conserved region Slip_0051 PF05175 Methyltransferase small domain Slip_0052 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Slip_0053 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Slip_0053 PF18277 AbrB C-terminal domain Slip_0054 PF08264 Anticodon-binding domain of tRNA Slip_0054 PF09334 tRNA synthetases class I (M) Slip_0054 PF01588 Putative tRNA binding domain Slip_0055 PF01026 TatD related DNase Slip_0056 PF07501 G5 domain Slip_0056 PF06725 3D domain Slip_0056 PF03990 G5-linked-Ubiquitin-like domain Slip_0058 PF00398 Ribosomal RNA adenine dimethylase Slip_0059 PF04308 Ribonuclease H-like Slip_0061 PF06257 Biofilm formation stimulator VEG Slip_0065 PF01734 Patatin-like phospholipase Slip_0069 PF01336 OB-fold nucleic acid binding domain Slip_0069 PF01966 HD domain Slip_0071 PF13195 Protein of unknown function (DUF4011) Slip_0071 PF13086 AAA domain Slip_0071 PF13087 AAA domain Slip_0079 PF00239 Resolvase, N terminal domain Slip_0079 PF07508 Recombinase Slip_0079 PF13408 Recombinase zinc beta ribbon domain Slip_0091 PF02687 FtsX-like permease family Slip_0091 PF12704 MacB-like periplasmic core domain Slip_0091 PF00005 ABC transporter Slip_0092 PF02687 FtsX-like permease family Slip_0092 PF12704 MacB-like periplasmic core domain Slip_0092 PF00005 ABC transporter Slip_0096 PF18698 Histidine kinase sensor domain Slip_0096 PF00989 PAS fold Slip_0096 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Slip_0096 PF00512 His Kinase A (phospho-acceptor) domain Slip_0096 PF00672 HAMP domain Slip_0097 PF00486 Transcriptional regulatory protein, C terminal Slip_0097 PF00072 Response regulator receiver domain Slip_0098 PF01144 Coenzyme A transferase Slip_0099 PF01144 Coenzyme A transferase Slip_0100 PF09551 Stage II sporulation protein R (spore_II_R) Slip_0101 PF00288 GHMP kinases N terminal domain Slip_0101 PF08544 GHMP kinases C terminal Slip_0102 PF00392 Bacterial regulatory proteins, gntR family Slip_0102 PF07729 FCD domain Slip_0104 PF12804 MobA-like NTP transferase domain Slip_0104 PF00132 Bacterial transferase hexapeptide (six repeats) Slip_0105 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Slip_0105 PF14572 Phosphoribosyl synthetase-associated domain Slip_0106 PF01195 Peptidyl-tRNA hydrolase Slip_0108 PF17757 UvrB interaction domain Slip_0108 PF00271 Helicase conserved C-terminal domain Slip_0108 PF02559 CarD-like/TRCF domain Slip_0108 PF00270 DEAD/DEAH box helicase Slip_0108 PF03461 TRCF domain Slip_0109 PF15714 Stage V sporulation protein T C-terminal, transcription factor Slip_0109 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Slip_0110 PF14667 Polysaccharide biosynthesis C-terminal domain Slip_0110 PF01943 Polysaccharide biosynthesis protein Slip_0111 PF03819 MazG nucleotide pyrophosphohydrolase domain Slip_0112 PF00216 Bacterial DNA-binding protein Slip_0113 PF01479 S4 domain Slip_0118 PF00575 S1 RNA binding domain Slip_0119 PF02541 Ppx/GppA phosphatase family Slip_0121 PF04055 Radical SAM superfamily Slip_0121 PF06968 Biotin and Thiamin Synthesis associated domain Slip_0124 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Slip_0124 PF00037 4Fe-4S binding domain Slip_0124 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Slip_0125 PF00037 4Fe-4S binding domain Slip_0125 PF02256 Iron hydrogenase small subunit Slip_0125 PF02906 Iron only hydrogenase large subunit, C-terminal domain Slip_0125 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Slip_0126 PF07228 Stage II sporulation protein E (SpoIIE) Slip_0127 PF11734 TilS substrate C-terminal domain Slip_0127 PF01171 PP-loop family Slip_0128 PF17862 AAA+ lid domain Slip_0128 PF00004 ATPase family associated with various cellular activities (AAA) Slip_0128 PF06480 FtsH Extracellular Slip_0128 PF01434 Peptidase family M41 Slip_0129 PF00334 Nucleoside diphosphate kinase Slip_0130 PF01268 Formate--tetrahydrofolate ligase Slip_0131 PF01966 HD domain Slip_0132 PF00809 Pterin binding enzyme Slip_0133 PF02152 Dihydroneopterin aldolase Slip_0134 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Slip_0135 PF01494 FAD binding domain Slip_0136 PF02548 Ketopantoate hydroxymethyltransferase Slip_0137 PF02569 Pantoate-beta-alanine ligase Slip_0138 PF02261 Aspartate decarboxylase Slip_0139 PF02445 Quinolinate synthetase A protein Slip_0140 PF00890 FAD binding domain Slip_0140 PF02910 Fumarate reductase flavoprotein C-term Slip_0141 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Slip_0141 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Slip_0142 PF02632 BioY family Slip_0143 PF03576 Peptidase family S58 Slip_0144 PF03309 Type III pantothenate kinase Slip_0145 PF01207 Dihydrouridine synthase (Dus) Slip_0149 PF01272 Transcription elongation factor, GreA/GreB, C-term Slip_0149 PF03449 Transcription elongation factor, N-terminal Slip_0150 PF00152 tRNA synthetases class II (D, K and N) Slip_0150 PF01336 OB-fold nucleic acid binding domain Slip_0151 PF01134 Glucose inhibited division protein A Slip_0151 PF13932 GidA associated domain Slip_0153 PF03062 MBOAT, membrane-bound O-acyltransferase family Slip_0157 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system Slip_0158 PF00953 Glycosyl transferase family 4 Slip_0159 PF03816 Cell envelope-related transcriptional attenuator domain Slip_0161 PF02719 Polysaccharide biosynthesis protein Slip_0162 PF13579 Glycosyl transferase 4-like domain Slip_0163 PF02719 Polysaccharide biosynthesis protein Slip_0163 PF08485 Polysaccharide biosynthesis protein C-terminal Slip_0164 PF01370 NAD dependent epimerase/dehydratase family Slip_0165 PF02350 UDP-N-acetylglucosamine 2-epimerase Slip_0166 PF00535 Glycosyl transferase family 2 Slip_0169 PF00884 Sulfatase Slip_0172 PF02397 Bacterial sugar transferase Slip_0173 PF02142 MGS-like domain Slip_0173 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Slip_0173 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Slip_0175 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Slip_0180 PF13614 AAA domain Slip_0187 PF01145 SPFH domain / Band 7 family Slip_0187 PF16200 C-terminal region of band_7 Slip_0189 PF00850 Histone deacetylase domain Slip_0208 PF03023 Lipid II flippase MurJ Slip_0215 PF01578 Cytochrome C assembly protein Slip_0216 PF05140 ResB-like family Slip_0219 PF00005 ABC transporter Slip_0220 PF00005 ABC transporter Slip_0221 PF02361 Cobalt transport protein Slip_0223 PF00890 FAD binding domain Slip_0223 PF04205 FMN-binding domain Slip_0224 PF00158 Sigma-54 interaction domain Slip_0224 PF13426 PAS domain Slip_0224 PF02954 Bacterial regulatory protein, Fis family Slip_0226 PF02687 FtsX-like permease family Slip_0226 PF12704 MacB-like periplasmic core domain Slip_0227 PF00005 ABC transporter Slip_0228 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Slip_0232 PF00248 Aldo/keto reductase family Slip_0233 PF00465 Iron-containing alcohol dehydrogenase Slip_0235 PF00440 Bacterial regulatory proteins, tetR family Slip_0235 PF08359 YsiA-like protein, C-terminal region Slip_0237 PF00005 ABC transporter Slip_0238 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Slip_0239 PF04073 Aminoacyl-tRNA editing domain Slip_0242 PF02915 Rubrerythrin Slip_0243 PF08543 Phosphomethylpyrimidine kinase Slip_0243 PF02581 Thiamine monophosphate synthase Slip_0244 PF01964 Radical SAM ThiC family Slip_0245 PF00291 Pyridoxal-phosphate dependent enzyme Slip_0246 PF03600 Citrate transporter Slip_0249 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Slip_0250 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Slip_0251 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Slip_0252 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Slip_0253 PF00146 NADH dehydrogenase Slip_0254 PF12838 4Fe-4S dicluster domain Slip_0255 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Slip_0256 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Slip_0257 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus Slip_0257 PF00361 Proton-conducting membrane transporter Slip_0257 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Slip_0258 PF00361 Proton-conducting membrane transporter Slip_0259 PF00361 Proton-conducting membrane transporter Slip_0260 PF02277 Phosphoribosyltransferase Slip_0261 PF01370 NAD dependent epimerase/dehydratase family Slip_0262 PF00924 Mechanosensitive ion channel Slip_0263 PF09587 Bacterial capsule synthesis protein PGA_cap Slip_0264 PF00482 Type II secretion system (T2SS), protein F Slip_0268 PF01520 N-acetylmuramoyl-L-alanine amidase Slip_0272 PF01869 BadF/BadG/BcrA/BcrD ATPase family Slip_0273 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component Slip_0276 PF00266 Aminotransferase class-V Slip_0279 PF00459 Inositol monophosphatase family Slip_0282 PF00158 Sigma-54 interaction domain Slip_0282 PF00989 PAS fold Slip_0282 PF02954 Bacterial regulatory protein, Fis family Slip_0284 PF00108 Thiolase, N-terminal domain Slip_0284 PF02803 Thiolase, C-terminal domain Slip_0285 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Slip_0285 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Slip_0286 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Slip_0286 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Slip_0286 PF02770 Acyl-CoA dehydrogenase, middle domain Slip_0287 PF01144 Coenzyme A transferase Slip_0288 PF01144 Coenzyme A transferase Slip_0290 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Slip_0290 PF01676 Metalloenzyme superfamily Slip_0291 PF03845 Spore germination protein Slip_0298 PF03323 Bacillus/Clostridium GerA spore germination protein Slip_0305 PF02634 FdhD/NarQ family Slip_0308 PF00266 Aminotransferase class-V Slip_0309 PF02082 Transcriptional regulator Slip_0310 PF02445 Quinolinate synthetase A protein Slip_0311 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Slip_0311 PF05698 Bacterial trigger factor protein (TF) C-terminus Slip_0311 PF05697 Bacterial trigger factor protein (TF) Slip_0312 PF00574 Clp protease Slip_0313 PF10431 C-terminal, D2-small domain, of ClpB protein Slip_0313 PF06689 ClpX C4-type zinc finger Slip_0313 PF07724 AAA domain (Cdc48 subfamily) Slip_0314 PF00004 ATPase family associated with various cellular activities (AAA) Slip_0314 PF05362 Lon protease (S16) C-terminal proteolytic domain Slip_0315 PF05362 Lon protease (S16) C-terminal proteolytic domain Slip_0315 PF00004 ATPase family associated with various cellular activities (AAA) Slip_0315 PF02190 ATP-dependent protease La (LON) substrate-binding domain Slip_0316 PF01926 50S ribosome-binding GTPase Slip_0318 PF01208 Uroporphyrinogen decarboxylase (URO-D) Slip_0319 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component Slip_0320 PF04260 Protein of unknown function (DUF436) Slip_0321 PF00294 pfkB family carbohydrate kinase Slip_0322 PF13407 Periplasmic binding protein domain Slip_0323 PF02607 B12 binding domain Slip_0323 PF02310 B12 binding domain Slip_0325 PF02653 Branched-chain amino acid transport system / permease component Slip_0327 PF00331 Glycosyl hydrolase family 10 Slip_0327 PF00395 S-layer homology domain Slip_0327 PF02018 Carbohydrate binding domain Slip_0327 PF06452 Carbohydrate family 9 binding domain-like Slip_0329 PF02361 Cobalt transport protein Slip_0330 PF00005 ABC transporter Slip_0334 PF13614 AAA domain Slip_0336 PF02001 Protein of unknown function DUF134 Slip_0339 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Slip_0341 PF10609 NUBPL iron-transfer P-loop NTPase Slip_0346 PF04294 VanW like protein Slip_0350 PF00085 Thioredoxin Slip_0351 PF12002 MgsA AAA+ ATPase C terminal Slip_0351 PF00004 ATPase family associated with various cellular activities (AAA) Slip_0351 PF16193 AAA C-terminal domain Slip_0355 PF01594 AI-2E family transporter Slip_0356 PF01411 tRNA synthetases class II (A) Slip_0356 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Slip_0356 PF02272 DHHA1 domain Slip_0357 PF06135 IreB regulatory phosphoprotein Slip_0359 PF03652 Holliday junction resolvase Slip_0360 PF06949 Protein of unknown function (DUF1292) Slip_0361 PF04294 VanW like protein Slip_0362 PF02618 YceG-like family Slip_0365 PF12849 PBP superfamily domain Slip_0366 PF03793 PASTA domain Slip_0366 PF00905 Penicillin binding protein transpeptidase domain Slip_0366 PF03717 Penicillin-binding Protein dimerisation domain Slip_0367 PF00072 Response regulator receiver domain Slip_0367 PF00486 Transcriptional regulatory protein, C terminal Slip_0368 PF18698 Histidine kinase sensor domain Slip_0368 PF00989 PAS fold Slip_0368 PF00672 HAMP domain Slip_0368 PF00512 His Kinase A (phospho-acceptor) domain Slip_0368 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Slip_0369 PF00528 Binding-protein-dependent transport system inner membrane component Slip_0370 PF00528 Binding-protein-dependent transport system inner membrane component Slip_0371 PF00005 ABC transporter Slip_0372 PF01895 PhoU domain Slip_0374 PF00005 ABC transporter Slip_0376 PF01891 Cobalt uptake substrate-specific transmembrane region Slip_0376 PF13190 PDGLE domain Slip_0377 PF01891 Cobalt uptake substrate-specific transmembrane region Slip_0377 PF13190 PDGLE domain Slip_0381 PF17203 Single cache domain 3 Slip_0381 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain Slip_0381 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Slip_0381 PF00989 PAS fold Slip_0382 PF00072 Response regulator receiver domain Slip_0382 PF04397 LytTr DNA-binding domain Slip_0383 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Slip_0384 PF02492 CobW/HypB/UreG, nucleotide-binding domain Slip_0385 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal Slip_0385 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Slip_0386 PF00374 Nickel-dependent hydrogenase Slip_0387 PF01292 Prokaryotic cytochrome b561 Slip_0388 PF01750 Hydrogenase maturation protease Slip_0389 PF17788 HypF Kae1-like domain Slip_0389 PF00708 Acylphosphatase Slip_0389 PF07503 HypF finger Slip_0389 PF01300 Telomere recombination Slip_0390 PF01455 HupF/HypC family Slip_0391 PF01924 Hydrogenase formation hypA family Slip_0392 PF02769 AIR synthase related protein, C-terminal domain Slip_0392 PF00586 AIR synthase related protein, N-terminal domain Slip_0393 PF04542 Sigma-70 region 2 Slip_0393 PF04545 Sigma-70, region 4 Slip_0395 PF01488 Shikimate / quinate 5-dehydrogenase Slip_0395 PF08501 Shikimate dehydrogenase substrate binding domain Slip_0395 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Slip_0397 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Slip_0398 PF01264 Chorismate synthase Slip_0399 PF01202 Shikimate kinase Slip_0400 PF01761 3-dehydroquinate synthase Slip_0401 PF00437 Type II/IV secretion system protein Slip_0401 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Slip_0406 PF01523 Putative modulator of DNA gyrase Slip_0407 PF01523 Putative modulator of DNA gyrase Slip_0408 PF01220 Dehydroquinase class II Slip_0409 PF01321 Creatinase/Prolidase N-terminal domain Slip_0409 PF00557 Metallopeptidase family M24 Slip_0410 PF08207 Elongation factor P (EF-P) KOW-like domain Slip_0410 PF09285 Elongation factor P, C-terminal Slip_0410 PF01132 Elongation factor P (EF-P) OB domain Slip_0412 PF14804 Jag N-terminus Slip_0412 PF01424 R3H domain Slip_0417 PF06686 Stage III sporulation protein AC/AD protein family Slip_0418 PF09546 Stage III sporulation protein AE (spore_III_AE) Slip_0422 PF02436 Conserved carboxylase domain Slip_0422 PF00682 HMGL-like Slip_0422 PF00364 Biotin-requiring enzyme Slip_0423 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Slip_0423 PF02785 Biotin carboxylase C-terminal domain Slip_0423 PF00289 Biotin carboxylase, N-terminal domain Slip_0424 PF03780 Asp23 family, cell envelope-related function Slip_0427 PF01029 NusB family Slip_0428 PF00814 Glycoprotease family Slip_0429 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Slip_0429 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Slip_0430 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Slip_0430 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Slip_0431 PF13742 OB-fold nucleic acid binding domain Slip_0431 PF02601 Exonuclease VII, large subunit Slip_0433 PF00348 Polyprenyl synthetase Slip_0434 PF02780 Transketolase, C-terminal domain Slip_0434 PF02779 Transketolase, pyrimidine binding domain Slip_0434 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Slip_0435 PF01728 FtsJ-like methyltransferase Slip_0435 PF01479 S4 domain Slip_0436 PF01513 ATP-NAD kinase Slip_0437 PF06962 Putative rRNA methylase Slip_0438 PF02863 Arginine repressor, C-terminal domain Slip_0438 PF01316 Arginine repressor, DNA binding domain Slip_0439 PF13476 AAA domain Slip_0440 PF05580 SpoIVB peptidase S55 Slip_0440 PF17820 PDZ domain Slip_0441 PF08769 Sporulation initiation factor Spo0A C terminal Slip_0441 PF00072 Response regulator receiver domain Slip_0442 PF02558 Ketopantoate reductase PanE/ApbA Slip_0442 PF08546 Ketopantoate reductase PanE/ApbA C terminal Slip_0444 PF11382 Copper transport outer membrane protein, MctB Slip_0445 PF00535 Glycosyl transferase family 2 Slip_0447 PF01546 Peptidase family M20/M25/M40 Slip_0447 PF07687 Peptidase dimerisation domain Slip_0450 PF00293 NUDIX domain Slip_0454 PF01047 MarR family Slip_0455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Slip_0455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Slip_0455 PF02770 Acyl-CoA dehydrogenase, middle domain Slip_0455 PF12806 Acetyl-CoA dehydrogenase C-terminal like Slip_0457 PF01494 FAD binding domain Slip_0459 PF01012 Electron transfer flavoprotein domain Slip_0460 PF01012 Electron transfer flavoprotein domain Slip_0460 PF00766 Electron transfer flavoprotein FAD-binding domain Slip_0461 PF00378 Enoyl-CoA hydratase/isomerase Slip_0462 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Slip_0462 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Slip_0465 PF02803 Thiolase, C-terminal domain Slip_0465 PF00108 Thiolase, N-terminal domain Slip_0466 PF00106 short chain dehydrogenase Slip_0470 PF02515 CoA-transferase family III Slip_0473 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Slip_0474 PF00350 Dynamin family Slip_0475 PF00501 AMP-binding enzyme Slip_0475 PF13193 AMP-binding enzyme C-terminal domain Slip_0477 PF03030 Inorganic H+ pyrophosphatase Slip_0479 PF00108 Thiolase, N-terminal domain Slip_0479 PF02803 Thiolase, C-terminal domain Slip_0481 PF12806 Acetyl-CoA dehydrogenase C-terminal like Slip_0481 PF02770 Acyl-CoA dehydrogenase, middle domain Slip_0481 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Slip_0482 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Slip_0482 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Slip_0485 PF00378 Enoyl-CoA hydratase/isomerase Slip_0486 PF00378 Enoyl-CoA hydratase/isomerase Slip_0489 PF00158 Sigma-54 interaction domain Slip_0489 PF13426 PAS domain Slip_0489 PF02954 Bacterial regulatory protein, Fis family Slip_0490 PF00378 Enoyl-CoA hydratase/isomerase Slip_0491 PF01944 Stage II sporulation protein M Slip_0493 PF02899 Phage integrase, N-terminal SAM-like domain Slip_0493 PF00589 Phage integrase family Slip_0494 PF01676 Metalloenzyme superfamily Slip_0495 PF02885 Glycosyl transferase family, helical bundle domain Slip_0495 PF00591 Glycosyl transferase family, a/b domain Slip_0495 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Slip_0496 PF00571 CBS domain Slip_0497 PF02146 Sir2 family Slip_0498 PF01966 HD domain Slip_0498 PF00072 Response regulator receiver domain Slip_0500 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Slip_0500 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Slip_0501 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Slip_0501 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Slip_0501 PF02770 Acyl-CoA dehydrogenase, middle domain Slip_0502 PF00378 Enoyl-CoA hydratase/isomerase Slip_0503 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Slip_0503 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Slip_0504 PF02954 Bacterial regulatory protein, Fis family Slip_0504 PF00989 PAS fold Slip_0504 PF00158 Sigma-54 interaction domain Slip_0505 PF02686 Glu-tRNAGln amidotransferase C subunit Slip_0506 PF01425 Amidase Slip_0507 PF02934 GatB/GatE catalytic domain Slip_0507 PF02637 GatB domain Slip_0508 PF00682 HMGL-like Slip_0509 PF00330 Aconitase family (aconitate hydratase) Slip_0510 PF00694 Aconitase C-terminal domain Slip_0511 PF00180 Isocitrate/isopropylmalate dehydrogenase Slip_0514 PF00534 Glycosyl transferases group 1 Slip_0514 PF13439 Glycosyltransferase Family 4 Slip_0515 PF04055 Radical SAM superfamily Slip_0515 PF02310 B12 binding domain Slip_0516 PF00072 Response regulator receiver domain Slip_0516 PF00990 Diguanylate cyclase, GGDEF domain Slip_0517 PF00483 Nucleotidyl transferase Slip_0519 PF08323 Starch synthase catalytic domain Slip_0519 PF00534 Glycosyl transferases group 1 Slip_0520 PF13361 UvrD-like helicase C-terminal domain Slip_0520 PF12705 PD-(D/E)XK nuclease superfamily Slip_0521 PF13361 UvrD-like helicase C-terminal domain Slip_0521 PF12705 PD-(D/E)XK nuclease superfamily Slip_0521 PF00580 UvrD/REP helicase N-terminal domain Slip_0522 PF00149 Calcineurin-like phosphoesterase Slip_0522 PF12320 Type 5 capsule protein repressor C-terminal domain Slip_0523 PF13476 AAA domain Slip_0524 PF00768 D-alanyl-D-alanine carboxypeptidase Slip_0524 PF07943 Penicillin-binding protein 5, C-terminal domain Slip_0525 PF01740 STAS domain Slip_0526 PF13581 Histidine kinase-like ATPase domain Slip_0527 PF04542 Sigma-70 region 2 Slip_0527 PF04539 Sigma-70 region 3 Slip_0527 PF04545 Sigma-70, region 4 Slip_0528 PF03862 SpoVAC/SpoVAEB sporulation membrane protein Slip_0529 PF07451 Stage V sporulation protein AD (SpoVAD) Slip_0530 PF03862 SpoVAC/SpoVAEB sporulation membrane protein Slip_0533 PF01869 BadF/BadG/BcrA/BcrD ATPase family Slip_0534 PF00291 Pyridoxal-phosphate dependent enzyme Slip_0535 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Slip_0535 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Slip_0536 PF12627 Probable RNA and SrmB- binding site of polymerase A Slip_0536 PF01966 HD domain Slip_0536 PF01743 Poly A polymerase head domain Slip_0537 PF02163 Peptidase family M50 Slip_0538 PF00579 tRNA synthetases class I (W and Y) Slip_0539 PF02616 Segregation and condensation protein ScpA Slip_0540 PF04079 Segregation and condensation complex subunit ScpB Slip_0543 PF00037 4Fe-4S binding domain Slip_0543 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Slip_0543 PF02256 Iron hydrogenase small subunit Slip_0543 PF02906 Iron only hydrogenase large subunit, C-terminal domain Slip_0547 PF00534 Glycosyl transferases group 1 Slip_0547 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase Slip_0548 PF01522 Polysaccharide deacetylase Slip_0550 PF13419 Haloacid dehalogenase-like hydrolase Slip_0552 PF09579 Sporulation protein YtfJ (Spore_YtfJ) Slip_0553 PF07670 Nucleoside recognition Slip_0554 PF07670 Nucleoside recognition Slip_0557 PF03167 Uracil DNA glycosylase superfamily Slip_0558 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Slip_0559 PF00814 Glycoprotease family Slip_0560 PF00583 Acetyltransferase (GNAT) family Slip_0561 PF00814 Glycoprotease family Slip_0562 PF01790 Prolipoprotein diacylglyceryl transferase Slip_0563 PF01812 5-formyltetrahydrofolate cyclo-ligase family Slip_0564 PF00149 Calcineurin-like phosphoesterase Slip_0567 PF12728 Helix-turn-helix domain Slip_0567 PF12727 PBP superfamily domain Slip_0568 PF04055 Radical SAM superfamily Slip_0568 PF06463 Molybdenum Cofactor Synthesis C Slip_0569 PF01967 MoaC family Slip_0571 PF01967 MoaC family Slip_0571 PF00994 Probable molybdopterin binding domain Slip_0572 PF00166 Chaperonin 10 Kd subunit Slip_0573 PF00118 TCP-1/cpn60 chaperonin family Slip_0575 PF01590 GAF domain Slip_0575 PF00158 Sigma-54 interaction domain Slip_0575 PF02954 Bacterial regulatory protein, Fis family Slip_0576 PF00753 Metallo-beta-lactamase superfamily Slip_0578 PF02515 CoA-transferase family III Slip_0579 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Slip_0579 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Slip_0580 PF00378 Enoyl-CoA hydratase/isomerase Slip_0581 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Slip_0581 PF02770 Acyl-CoA dehydrogenase, middle domain Slip_0581 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Slip_0583 PF00501 AMP-binding enzyme Slip_0583 PF13193 AMP-binding enzyme C-terminal domain Slip_0585 PF00158 Sigma-54 interaction domain Slip_0585 PF01590 GAF domain Slip_0587 PF02743 Cache domain Slip_0587 PF00672 HAMP domain Slip_0587 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Slip_0589 PF00156 Phosphoribosyl transferase domain Slip_0590 PF00958 GMP synthase C terminal domain Slip_0590 PF00117 Glutamine amidotransferase class-I Slip_0591 PF13307 Helicase C-terminal domain Slip_0591 PF06733 DEAD_2 Slip_0596 PF00731 AIR carboxylase Slip_0597 PF00206 Lyase Slip_0597 PF10397 Adenylosuccinate lyase C-terminus Slip_0598 PF01259 SAICAR synthetase Slip_0599 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase Slip_0601 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Slip_0601 PF00586 AIR synthase related protein, N-terminal domain Slip_0601 PF02769 AIR synthase related protein, C-terminal domain Slip_0602 PF00156 Phosphoribosyl transferase domain Slip_0603 PF00586 AIR synthase related protein, N-terminal domain Slip_0603 PF02769 AIR synthase related protein, C-terminal domain Slip_0604 PF00551 Formyl transferase Slip_0605 PF01808 AICARFT/IMPCHase bienzyme Slip_0605 PF02142 MGS-like domain Slip_0606 PF02844 Phosphoribosylglycinamide synthetase, N domain Slip_0606 PF02843 Phosphoribosylglycinamide synthetase, C domain Slip_0606 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Slip_0609 PF01371 Trp repressor protein Slip_0610 PF13393 Histidyl-tRNA synthetase Slip_0611 PF01634 ATP phosphoribosyltransferase Slip_0612 PF00815 Histidinol dehydrogenase Slip_0613 PF00475 Imidazoleglycerol-phosphate dehydratase Slip_0614 PF00117 Glutamine amidotransferase class-I Slip_0615 PF00977 Histidine biosynthesis protein Slip_0616 PF00977 Histidine biosynthesis protein Slip_0617 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Slip_0617 PF01502 Phosphoribosyl-AMP cyclohydrolase Slip_0618 PF00580 UvrD/REP helicase N-terminal domain Slip_0618 PF13361 UvrD-like helicase C-terminal domain Slip_0619 PF00533 BRCA1 C Terminus (BRCT) domain Slip_0619 PF12826 Helix-hairpin-helix motif Slip_0619 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Slip_0619 PF01653 NAD-dependent DNA ligase adenylation domain Slip_0619 PF03120 NAD-dependent DNA ligase OB-fold domain Slip_0620 PF01522 Polysaccharide deacetylase Slip_0625 PF01259 SAICAR synthetase Slip_0628 PF04055 Radical SAM superfamily Slip_0628 PF16199 Radical_SAM C-terminal domain Slip_0632 PF00534 Glycosyl transferases group 1 Slip_0632 PF13439 Glycosyltransferase Family 4 Slip_0633 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Slip_0634 PF00528 Binding-protein-dependent transport system inner membrane component Slip_0635 PF00528 Binding-protein-dependent transport system inner membrane component Slip_0636 PF00571 CBS domain Slip_0636 PF00005 ABC transporter Slip_0640 PF01980 tRNA-methyltransferase O Slip_0641 PF09587 Bacterial capsule synthesis protein PGA_cap Slip_0643 PF01266 FAD dependent oxidoreductase Slip_0646 PF03065 Glycosyl hydrolase family 57 Slip_0646 PF09210 Domain of unknown function (DUF1957) Slip_0653 PF00075 RNase H Slip_0657 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Slip_0659 PF00374 Nickel-dependent hydrogenase Slip_0659 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Slip_0659 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Slip_0661 PF00158 Sigma-54 interaction domain Slip_0662 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal Slip_0662 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal Slip_0665 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Slip_0665 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Slip_0667 PF00753 Metallo-beta-lactamase superfamily Slip_0668 PF13458 Periplasmic binding protein Slip_0669 PF02653 Branched-chain amino acid transport system / permease component Slip_0670 PF11862 Domain of unknown function (DUF3382) Slip_0670 PF02653 Branched-chain amino acid transport system / permease component Slip_0671 PF12399 Branched-chain amino acid ATP-binding cassette transporter Slip_0671 PF00005 ABC transporter Slip_0673 PF08486 Stage II sporulation protein Slip_0674 PF00588 SpoU rRNA Methylase family Slip_0675 PF12838 4Fe-4S dicluster domain Slip_0676 PF11897 Protein of unknown function (DUF3417) Slip_0676 PF00343 Carbohydrate phosphorylase Slip_0678 PF00753 Metallo-beta-lactamase superfamily Slip_0680 PF00133 tRNA synthetases class I (I, L, M and V) Slip_0680 PF10458 Valyl tRNA synthetase tRNA binding arm Slip_0680 PF08264 Anticodon-binding domain of tRNA Slip_0681 PF02875 Mur ligase family, glutamate ligase domain Slip_0681 PF08245 Mur ligase middle domain Slip_0683 PF01384 Phosphate transporter family Slip_0684 PF02629 CoA binding domain Slip_0684 PF06971 Putative DNA-binding protein N-terminus Slip_0686 PF02545 Maf-like protein Slip_0687 PF04002 RadC-like JAB domain Slip_0693 PF03717 Penicillin-binding Protein dimerisation domain Slip_0693 PF00905 Penicillin binding protein transpeptidase domain Slip_0695 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Slip_0696 PF03776 Septum formation topological specificity factor MinE Slip_0697 PF01098 Cell cycle protein Slip_0698 PF14492 Elongation Factor G, domain II Slip_0698 PF03764 Elongation factor G, domain IV Slip_0698 PF00009 Elongation factor Tu GTP binding domain Slip_0698 PF00679 Elongation factor G C-terminus Slip_0698 PF03144 Elongation factor Tu domain 2 Slip_0701 PF02163 Peptidase family M50 Slip_0701 PF00571 CBS domain Slip_0704 PF00575 S1 RNA binding domain Slip_0704 PF10150 Ribonuclease E/G family Slip_0705 PF00829 Ribosomal prokaryotic L21 protein Slip_0707 PF01016 Ribosomal L27 protein Slip_0709 PF09269 Domain of unknown function (DUF1967) Slip_0709 PF01018 GTP1/OBG Slip_0709 PF01926 50S ribosome-binding GTPase Slip_0710 PF01472 PUA domain Slip_0710 PF00696 Amino acid kinase family Slip_0711 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Slip_0711 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Slip_0713 PF07517 SecA DEAD-like domain Slip_0713 PF00271 Helicase conserved C-terminal domain Slip_0713 PF07516 SecA Wing and Scaffold domain Slip_0713 PF01043 SecA preprotein cross-linking domain Slip_0713 PF02810 SEC-C motif Slip_0718 PF00085 Thioredoxin Slip_0720 PF00625 Guanylate kinase Slip_0721 PF00905 Penicillin binding protein transpeptidase domain Slip_0721 PF00912 Transglycosylase Slip_0722 PF00579 tRNA synthetases class I (W and Y) Slip_0722 PF01479 S4 domain Slip_0724 PF01966 HD domain Slip_0726 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Slip_0726 PF00460 Flagella basal body rod protein Slip_0728 PF00005 ABC transporter Slip_0729 PF00005 ABC transporter Slip_0731 PF00440 Bacterial regulatory proteins, tetR family Slip_0733 PF02416 mttA/Hcf106 family Slip_0734 PF02574 Homocysteine S-methyltransferase Slip_0734 PF02310 B12 binding domain Slip_0734 PF02607 B12 binding domain Slip_0734 PF02965 Vitamin B12 dependent methionine synthase, activation domain Slip_0734 PF00809 Pterin binding enzyme Slip_0736 PF12838 4Fe-4S dicluster domain Slip_0738 PF02540 NAD synthase Slip_0739 PF01709 Transcriptional regulator Slip_0741 PF02075 Crossover junction endodeoxyribonuclease RuvC Slip_0742 PF07499 RuvA, C-terminal domain Slip_0742 PF01330 RuvA N terminal domain Slip_0743 PF05491 RuvB C-terminal winged helix domain Slip_0743 PF17864 RuvB AAA lid domain Slip_0743 PF05496 Holliday junction DNA helicase RuvB P-loop domain Slip_0744 PF02677 Epoxyqueuosine reductase QueH Slip_0745 PF11146 Protein of unknown function (DUF2905) Slip_0748 PF02547 Queuosine biosynthesis protein Slip_0749 PF01702 Queuine tRNA-ribosyltransferase Slip_0750 PF02699 Preprotein translocase subunit Slip_0752 PF07549 SecD/SecF GG Motif Slip_0752 PF02355 Protein export membrane protein Slip_0753 PF07549 SecD/SecF GG Motif Slip_0753 PF02355 Protein export membrane protein Slip_0754 PF00534 Glycosyl transferases group 1 Slip_0754 PF13439 Glycosyltransferase Family 4 Slip_0757 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Slip_0757 PF12557 Cob(I)alamin adenosyltransferase N terminal Slip_0759 PF02310 B12 binding domain Slip_0759 PF01642 Methylmalonyl-CoA mutase Slip_0762 PF00862 Sucrose synthase Slip_0762 PF00534 Glycosyl transferases group 1 Slip_0763 PF04041 beta-1,4-mannooligosaccharide phosphorylase Slip_0764 PF00483 Nucleotidyl transferase Slip_0764 PF01050 Mannose-6-phosphate isomerase Slip_0765 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Slip_0765 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Slip_0765 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Slip_0765 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Slip_0766 PF16916 Dimerisation domain of Zinc Transporter Slip_0766 PF01545 Cation efflux family Slip_0767 PF02272 DHHA1 domain Slip_0767 PF01368 DHH family Slip_0767 PF10141 Single-strand DNA-specific exonuclease, C terminal domain Slip_0767 PF17768 RecJ OB domain Slip_0768 PF04607 Region found in RelA / SpoT proteins Slip_0768 PF13291 ACT domain Slip_0768 PF02824 TGS domain Slip_0769 PF02580 D-Tyr-tRNA(Tyr) deacylase Slip_0770 PF00753 Metallo-beta-lactamase superfamily Slip_0771 PF18152 DAHP synthase ferredoxin-like domain Slip_0771 PF00793 DAHP synthetase I family Slip_0772 PF00800 Prephenate dehydratase Slip_0772 PF01842 ACT domain Slip_0772 PF01817 Chorismate mutase type II Slip_0773 PF04055 Radical SAM superfamily Slip_0774 PF03129 Anticodon binding domain Slip_0774 PF13393 Histidyl-tRNA synthetase Slip_0775 PF01336 OB-fold nucleic acid binding domain Slip_0775 PF00152 tRNA synthetases class II (D, K and N) Slip_0775 PF02938 GAD domain Slip_0776 PF00899 ThiF family Slip_0778 PF00501 AMP-binding enzyme Slip_0778 PF14535 AMP-binding enzyme C-terminal domain Slip_0782 PF01791 DeoC/LacD family aldolase Slip_0783 PF08240 Alcohol dehydrogenase GroES-like domain Slip_0783 PF00107 Zinc-binding dehydrogenase Slip_0786 PF02381 MraZ protein, putative antitoxin-like Slip_0787 PF01795 MraW methylase family Slip_0789 PF03793 PASTA domain Slip_0789 PF03717 Penicillin-binding Protein dimerisation domain Slip_0789 PF00905 Penicillin binding protein transpeptidase domain Slip_0790 PF08245 Mur ligase middle domain Slip_0790 PF02875 Mur ligase family, glutamate ligase domain Slip_0790 PF01225 Mur ligase family, catalytic domain Slip_0791 PF08245 Mur ligase middle domain Slip_0791 PF02875 Mur ligase family, glutamate ligase domain Slip_0791 PF01225 Mur ligase family, catalytic domain Slip_0792 PF00953 Glycosyl transferase family 4 Slip_0792 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Slip_0793 PF08245 Mur ligase middle domain Slip_0793 PF02875 Mur ligase family, glutamate ligase domain Slip_0794 PF01098 Cell cycle protein Slip_0795 PF03033 Glycosyltransferase family 28 N-terminal domain Slip_0795 PF04101 Glycosyltransferase family 28 C-terminal domain Slip_0796 PF08245 Mur ligase middle domain Slip_0796 PF02875 Mur ligase family, glutamate ligase domain Slip_0796 PF01225 Mur ligase family, catalytic domain Slip_0797 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Slip_0798 PF01451 Low molecular weight phosphotyrosine protein phosphatase Slip_0799 PF01022 Bacterial regulatory protein, arsR family Slip_0800 PF00403 Heavy-metal-associated domain Slip_0801 PF03799 Cell division protein FtsQ Slip_0801 PF08478 POTRA domain, FtsQ-type Slip_0803 PF06947 Protein of unknown function (DUF1290) Slip_0804 PF02491 SHS2 domain inserted in FTSA Slip_0805 PF12327 FtsZ family, C-terminal domain Slip_0805 PF00091 Tubulin/FtsZ family, GTPase domain Slip_0806 PF03419 Sporulation factor SpoIIGA Slip_0807 PF04542 Sigma-70 region 2 Slip_0807 PF04545 Sigma-70, region 4 Slip_0808 PF04539 Sigma-70 region 3 Slip_0808 PF04542 Sigma-70 region 2 Slip_0808 PF04545 Sigma-70, region 4 Slip_0810 PF05239 PRC-barrel domain Slip_0811 PF03477 ATP cone domain Slip_0812 PF13597 Anaerobic ribonucleoside-triphosphate reductase Slip_0812 PF03477 ATP cone domain Slip_0815 PF00072 Response regulator receiver domain Slip_0815 PF00486 Transcriptional regulatory protein, C terminal Slip_0816 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Slip_0816 PF16736 Single Cache-like Slip_0816 PF00989 PAS fold Slip_0816 PF00512 His Kinase A (phospho-acceptor) domain Slip_0818 PF01168 Alanine racemase, N-terminal domain Slip_0819 PF04472 Cell division protein SepF Slip_0820 PF03807 NADP oxidoreductase coenzyme F420-dependent Slip_0820 PF14748 Pyrroline-5-carboxylate reductase dimerisation Slip_0821 PF02325 YGGT family Slip_0822 PF12392 Collagenase Slip_0822 PF01136 Peptidase family U32 Slip_0823 PF05103 DivIVA protein Slip_0824 PF02594 Uncharacterised ACR, YggU family COG1872 Slip_0825 PF00730 HhH-GPD superfamily base excision DNA repair protein Slip_0825 PF00633 Helix-hairpin-helix motif Slip_0825 PF10576 Iron-sulfur binding domain of endonuclease III Slip_0827 PF06827 Zinc finger found in FPG and IleRS Slip_0827 PF08264 Anticodon-binding domain of tRNA Slip_0827 PF00133 tRNA synthetases class I (I, L, M and V) Slip_0829 PF05167 Uncharacterised ACR (DUF711) Slip_0830 PF00881 Nitroreductase family Slip_0833 PF01258 Prokaryotic dksA/traR C4-type zinc finger Slip_0834 PF13439 Glycosyltransferase Family 4 Slip_0834 PF00534 Glycosyl transferases group 1 Slip_0835 PF01252 Signal peptidase (SPase) II Slip_0836 PF00849 RNA pseudouridylate synthase Slip_0836 PF01479 S4 domain Slip_0837 PF00156 Phosphoribosyl transferase domain Slip_0838 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Slip_0838 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Slip_0839 PF01979 Amidohydrolase family Slip_0840 PF00970 Oxidoreductase FAD-binding domain Slip_0840 PF00175 Oxidoreductase NAD-binding domain Slip_0840 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Slip_0841 PF01180 Dihydroorotate dehydrogenase Slip_0842 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Slip_0843 PF00156 Phosphoribosyl transferase domain Slip_0846 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Slip_0846 PF07992 Pyridine nucleotide-disulphide oxidoreductase Slip_0849 PF00689 Cation transporting ATPase, C-terminus Slip_0849 PF00690 Cation transporter/ATPase, N-terminus Slip_0850 PF01678 Diaminopimelate epimerase Slip_0851 PF00155 Aminotransferase class I and II Slip_0852 PF08340 Domain of unknown function (DUF1732) Slip_0852 PF03755 YicC-like family, N-terminal region Slip_0853 PF04025 Domain of unknown function (DUF370) Slip_0854 PF00625 Guanylate kinase Slip_0855 PF01192 RNA polymerase Rpb6 Slip_0856 PF02441 Flavoprotein Slip_0856 PF04127 DNA / pantothenate metabolism flavoprotein Slip_0857 PF00438 S-adenosylmethionine synthetase, N-terminal domain Slip_0857 PF02773 S-adenosylmethionine synthetase, C-terminal domain Slip_0857 PF02772 S-adenosylmethionine synthetase, central domain Slip_0858 PF17764 3′ DNA-binding domain (3′BD) Slip_0858 PF00271 Helicase conserved C-terminal domain Slip_0858 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Slip_0858 PF18074 Primosomal protein N C-terminal domain Slip_0858 PF04851 Type III restriction enzyme, res subunit Slip_0859 PF01327 Polypeptide deformylase Slip_0860 PF00551 Formyl transferase Slip_0860 PF02911 Formyl transferase, C-terminal domain Slip_0862 PF04298 Putative neutral zinc metallopeptidase Slip_0863 PF01029 NusB family Slip_0863 PF01189 16S rRNA methyltransferase RsmB/F Slip_0864 PF04055 Radical SAM superfamily Slip_0866 PF00069 Protein kinase domain Slip_0866 PF03793 PASTA domain Slip_0867 PF03193 RsgA GTPase Slip_0867 PF16745 RsgA N-terminal domain Slip_0868 PF00834 Ribulose-phosphate 3 epimerase family Slip_0869 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Slip_0869 PF01872 RibD C-terminal domain Slip_0870 PF00677 Lumazine binding domain Slip_0871 PF00925 GTP cyclohydrolase II Slip_0871 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Slip_0872 PF00885 6,7-dimethyl-8-ribityllumazine synthase Slip_0873 PF01047 MarR family Slip_0874 PF02770 Acyl-CoA dehydrogenase, middle domain Slip_0874 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Slip_0874 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Slip_0875 PF01012 Electron transfer flavoprotein domain Slip_0876 PF01012 Electron transfer flavoprotein domain Slip_0876 PF00766 Electron transfer flavoprotein FAD-binding domain Slip_0877 PF01494 FAD binding domain Slip_0879 PF02954 Bacterial regulatory protein, Fis family Slip_0879 PF00989 PAS fold Slip_0879 PF00158 Sigma-54 interaction domain Slip_0880 PF00108 Thiolase, N-terminal domain Slip_0880 PF02803 Thiolase, C-terminal domain Slip_0881 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Slip_0881 PF12806 Acetyl-CoA dehydrogenase C-terminal like Slip_0881 PF02770 Acyl-CoA dehydrogenase, middle domain Slip_0882 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Slip_0882 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Slip_0883 PF00158 Sigma-54 interaction domain Slip_0883 PF00989 PAS fold Slip_0883 PF02954 Bacterial regulatory protein, Fis family Slip_0884 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Slip_0884 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Slip_0884 PF02770 Acyl-CoA dehydrogenase, middle domain Slip_0885 PF00072 Response regulator receiver domain Slip_0885 PF00990 Diguanylate cyclase, GGDEF domain Slip_0888 PF00830 Ribosomal L28 family Slip_0889 PF03780 Asp23 family, cell envelope-related function Slip_0890 PF02734 DAK2 domain Slip_0890 PF13684 Dihydroxyacetone kinase family Slip_0891 PF00271 Helicase conserved C-terminal domain Slip_0891 PF17191 RecG wedge domain Slip_0891 PF00270 DEAD/DEAH box helicase Slip_0893 PF00269 Small, acid-soluble spore proteins, alpha/beta type Slip_0894 PF03418 Germination protease Slip_0897 PF01048 Phosphorylase superfamily Slip_0898 PF00156 Phosphoribosyl transferase domain Slip_0900 PF01734 Patatin-like phospholipase Slip_0901 PF05636 HIGH Nucleotidyl Transferase Slip_0902 PF01515 Phosphate acetyl/butaryl transferase Slip_0903 PF00871 Acetokinase family Slip_0905 PF04297 Putative helix-turn-helix protein, YlxM / p13 like Slip_0906 PF02978 Signal peptide binding domain Slip_0906 PF00448 SRP54-type protein, GTPase domain Slip_0906 PF02881 SRP54-type protein, helical bundle domain Slip_0907 PF00886 Ribosomal protein S16 Slip_0909 PF05239 PRC-barrel domain Slip_0909 PF01782 RimM N-terminal domain Slip_0910 PF01746 tRNA (Guanine-1)-methyltransferase Slip_0911 PF09936 SAM-dependent RNA methyltransferase Slip_0912 PF01245 Ribosomal protein L19 Slip_0913 PF01926 50S ribosome-binding GTPase Slip_0914 PF01351 Ribonuclease HII Slip_0916 PF01312 FlhB HrpN YscU SpaS Family Slip_0917 PF02021 Uncharacterised protein family UPF0102 Slip_0918 PF01261 Xylose isomerase-like TIM barrel Slip_0920 PF02571 Precorrin-6x reductase CbiJ/CobK Slip_0921 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Slip_0922 PF11760 Cobalamin synthesis G N-terminal Slip_0922 PF11761 Cobalamin biosynthesis central region Slip_0922 PF01890 Cobalamin synthesis G C-terminus Slip_0923 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Slip_0925 PF01888 CbiD Slip_0926 PF02570 Precorrin-8X methylmutase Slip_0927 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Slip_0928 PF06180 Cobalt chelatase (CbiK) Slip_0929 PF00005 ABC transporter Slip_0931 PF02553 Cobalt transport protein component CbiN Slip_0932 PF01891 Cobalt uptake substrate-specific transmembrane region Slip_0933 PF00155 Aminotransferase class I and II Slip_0934 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Slip_0934 PF07685 CobB/CobQ-like glutamine amidotransferase domain Slip_0935 PF02082 Transcriptional regulator Slip_0936 PF03063 Prismane/CO dehydrogenase family Slip_0937 PF00011 Hsp20/alpha crystallin family Slip_0938 PF13335 Magnesium chelatase, subunit ChlI C-terminal Slip_0938 PF01078 Magnesium chelatase, subunit ChlI Slip_0941 PF01894 Uncharacterised protein family UPF0047 Slip_0943 PF17782 DprA winged helix domain Slip_0943 PF02481 DNA recombination-mediator protein A Slip_0944 PF01131 DNA topoisomerase Slip_0944 PF01751 Toprim domain Slip_0944 PF01396 Topoisomerase DNA binding C4 zinc finger Slip_0945 PF01134 Glucose inhibited division protein A Slip_0946 PF02899 Phage integrase, N-terminal SAM-like domain Slip_0946 PF00589 Phage integrase family Slip_0947 PF00227 Proteasome subunit Slip_0948 PF10431 C-terminal, D2-small domain, of ClpB protein Slip_0948 PF07724 AAA domain (Cdc48 subfamily) Slip_0949 PF08222 CodY helix-turn-helix domain Slip_0949 PF06018 CodY GAF-like domain Slip_0950 PF00460 Flagella basal body rod protein Slip_0951 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Slip_0951 PF00460 Flagella basal body rod protein Slip_0952 PF02049 Flagellar hook-basal body complex protein FliE Slip_0953 PF08345 Flagellar M-ring protein C-terminal Slip_0953 PF01514 Secretory protein of YscJ/FliF family Slip_0954 PF14841 FliG middle domain Slip_0954 PF01706 FliG C-terminal domain Slip_0954 PF14842 FliG N-terminal domain Slip_0955 PF02108 Flagellar assembly protein FliH Slip_0956 PF02874 ATP synthase alpha/beta family, beta-barrel domain Slip_0956 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Slip_0956 PF18269 T3SS EscN ATPase C-terminal domain Slip_0960 PF03963 Flagellar hook capping protein - N-terminal region Slip_0962 PF00460 Flagella basal body rod protein Slip_0962 PF07559 Flagellar basal body protein FlaE Slip_0962 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Slip_0963 PF06289 Flagellar and Swarming motility proteins Slip_0965 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Slip_0965 PF02154 Flagellar motor switch protein FliM Slip_0966 PF04509 CheC-like family Slip_0966 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Slip_0967 PF00072 Response regulator receiver domain Slip_0969 PF00813 FliP family Slip_0970 PF01313 Bacterial export proteins, family 3 Slip_0971 PF01311 Bacterial export proteins, family 1 Slip_0972 PF01312 FlhB HrpN YscU SpaS Family Slip_0973 PF00771 FHIPEP family Slip_0974 PF00448 SRP54-type protein, GTPase domain Slip_0975 PF10609 NUBPL iron-transfer P-loop NTPase Slip_0977 PF01339 CheB methylesterase Slip_0977 PF00072 Response regulator receiver domain Slip_0978 PF02895 Signal transducing histidine kinase, homodimeric domain Slip_0978 PF07194 P2 response regulator binding domain Slip_0978 PF01584 CheW-like domain Slip_0978 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Slip_0978 PF01627 Hpt domain Slip_0979 PF01584 CheW-like domain Slip_0980 PF04509 CheC-like family Slip_0981 PF03975 CheD chemotactic sensory transduction Slip_0982 PF04545 Sigma-70, region 4 Slip_0982 PF04542 Sigma-70 region 2 Slip_0982 PF04539 Sigma-70 region 3 Slip_0986 PF00318 Ribosomal protein S2 Slip_0987 PF00889 Elongation factor TS Slip_0988 PF00696 Amino acid kinase family Slip_0989 PF01765 Ribosome recycling factor Slip_0990 PF01255 Putative undecaprenyl diphosphate synthase Slip_0992 PF01594 AI-2E family transporter Slip_0993 PF13288 DXP reductoisomerase C-terminal domain Slip_0993 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Slip_0993 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Slip_0994 PF17820 PDZ domain Slip_0994 PF02163 Peptidase family M50 Slip_0995 PF04551 GcpE protein Slip_0996 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Slip_0996 PF03129 Anticodon binding domain Slip_0996 PF04073 Aminoacyl-tRNA editing domain Slip_0997 PF02308 MgtC family Slip_0998 PF14579 Helix-hairpin-helix motif Slip_0998 PF02811 PHP domain Slip_0998 PF07733 Bacterial DNA polymerase III alpha NTPase domain Slip_0998 PF00929 Exonuclease Slip_0998 PF11490 DNA polymerase III polC-type N-terminus II Slip_0998 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Slip_0999 PF02576 RimP N-terminal domain Slip_0999 PF17384 RimP C-terminal SH3 domain Slip_1000 PF00575 S1 RNA binding domain Slip_1000 PF08529 NusA N-terminal domain Slip_1000 PF13184 NusA-like KH domain Slip_1003 PF00009 Elongation factor Tu GTP binding domain Slip_1003 PF11987 Translation-initiation factor 2 Slip_1003 PF04760 Translation initiation factor IF-2, N-terminal region Slip_1004 PF02033 Ribosome-binding factor A Slip_1006 PF09157 Pseudouridine synthase II TruB, C-terminal Slip_1006 PF16198 tRNA pseudouridylate synthase B C-terminal domain Slip_1006 PF01509 TruB family pseudouridylate synthase (N terminal domain) Slip_1007 PF01687 Riboflavin kinase Slip_1007 PF06574 FAD synthetase Slip_1008 PF00312 Ribosomal protein S15 Slip_1009 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Slip_1009 PF00575 S1 RNA binding domain Slip_1009 PF03725 3' exoribonuclease family, domain 2 Slip_1009 PF01138 3' exoribonuclease family, domain 1 Slip_1009 PF00013 KH domain Slip_1010 PF04294 VanW like protein Slip_1011 PF01522 Polysaccharide deacetylase Slip_1012 PF07943 Penicillin-binding protein 5, C-terminal domain Slip_1012 PF00768 D-alanyl-D-alanine carboxypeptidase Slip_1013 PF05193 Peptidase M16 inactive domain Slip_1013 PF00675 Insulinase (Peptidase family M16) Slip_1015 PF00692 dUTPase Slip_1016 PF05239 PRC-barrel domain Slip_1019 PF01113 Dihydrodipicolinate reductase, N-terminus Slip_1019 PF05173 Dihydrodipicolinate reductase, C-terminus Slip_1020 PF00005 ABC transporter Slip_1022 PF00005 ABC transporter Slip_1023 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Slip_1023 PF16924 Dipicolinate synthase subunit A N-terminal domain Slip_1024 PF02441 Flavoprotein Slip_1025 PF01118 Semialdehyde dehydrogenase, NAD binding domain Slip_1025 PF02774 Semialdehyde dehydrogenase, dimerisation domain Slip_1026 PF00701 Dihydrodipicolinate synthetase family Slip_1027 PF00753 Metallo-beta-lactamase superfamily Slip_1027 PF17770 Ribonuclease J C-terminal domain Slip_1027 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Slip_1028 PF08331 Domain of unknown function (DUF1730) Slip_1029 PF00571 CBS domain Slip_1029 PF01380 SIS domain Slip_1030 PF07690 Major Facilitator Superfamily Slip_1031 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Slip_1031 PF01568 Molydopterin dinucleotide binding domain Slip_1031 PF00384 Molybdopterin oxidoreductase Slip_1031 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Slip_1031 PF12838 4Fe-4S dicluster domain Slip_1032 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Slip_1032 PF01568 Molydopterin dinucleotide binding domain Slip_1032 PF00384 Molybdopterin oxidoreductase Slip_1033 PF00574 Clp protease Slip_1035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Slip_1035 PF12729 Four helix bundle sensory module for signal transduction Slip_1035 PF00672 HAMP domain Slip_1037 PF02673 Bacitracin resistance protein BacA Slip_1038 PF17854 FtsK alpha domain Slip_1038 PF09397 Ftsk gamma domain Slip_1038 PF01580 FtsK/SpoIIIE family Slip_1038 PF13491 4TM region of DNA translocase FtsK/SpoIIIE Slip_1039 PF00294 pfkB family carbohydrate kinase Slip_1042 PF00919 Uncharacterized protein family UPF0004 Slip_1042 PF18693 TRAM domain Slip_1042 PF04055 Radical SAM superfamily Slip_1043 PF01066 CDP-alcohol phosphatidyltransferase Slip_1045 PF01434 Peptidase family M41 Slip_1045 PF00004 ATPase family associated with various cellular activities (AAA) Slip_1045 PF17862 AAA+ lid domain Slip_1048 PF18146 Damage-inducible protein CinA KH domain Slip_1048 PF00994 Probable molybdopterin binding domain Slip_1048 PF02464 Competence-damaged protein Slip_1050 PF00154 recA bacterial DNA recombination protein Slip_1051 PF12072 Domain of unknown function (DUF3552) Slip_1051 PF01966 HD domain Slip_1051 PF00013 KH domain Slip_1052 PF13277 YmdB-like protein Slip_1053 PF04232 Stage V sporulation protein S (SpoVS) Slip_1054 PF01244 Membrane dipeptidase (Peptidase family M19) Slip_1055 PF02811 PHP domain Slip_1056 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Slip_1057 PF00877 NlpC/P60 family Slip_1057 PF01476 LysM domain Slip_1059 PF00478 IMP dehydrogenase / GMP reductase domain Slip_1059 PF00571 CBS domain Slip_1060 PF03061 Thioesterase superfamily Slip_1061 PF02308 MgtC family Slip_1062 PF03323 Bacillus/Clostridium GerA spore germination protein Slip_1064 PF05504 Spore germination B3/ GerAC like, C-terminal Slip_1067 PF00269 Small, acid-soluble spore proteins, alpha/beta type Slip_1069 PF02645 Uncharacterised protein, DegV family COG1307 Slip_1071 PF04055 Radical SAM superfamily Slip_1071 PF01938 TRAM domain Slip_1071 PF00919 Uncharacterized protein family UPF0004 Slip_1073 PF01624 MutS domain I Slip_1073 PF05188 MutS domain II Slip_1073 PF05192 MutS domain III Slip_1073 PF05190 MutS family domain IV Slip_1073 PF00488 MutS domain V Slip_1074 PF01968 Hydantoinase/oxoprolinase Slip_1074 PF05378 Hydantoinase/oxoprolinase N-terminal region Slip_1075 PF00850 Histone deacetylase domain Slip_1076 PF08676 MutL C terminal dimerisation domain Slip_1076 PF01119 DNA mismatch repair protein, C-terminal domain Slip_1077 PF04445 Putative SAM-dependent methyltransferase Slip_1079 PF17209 Hfq protein Slip_1080 PF00004 ATPase family associated with various cellular activities (AAA) Slip_1080 PF17866 AAA lid domain Slip_1081 PF06838 Methionine gamma-lyase Slip_1083 PF03951 Glutamine synthetase, beta-Grasp domain Slip_1083 PF00120 Glutamine synthetase, catalytic domain Slip_1084 PF00717 Peptidase S24-like Slip_1084 PF01726 LexA DNA binding domain Slip_1085 PF01171 PP-loop family Slip_1086 PF02754 Cysteine-rich domain Slip_1086 PF13183 4Fe-4S dicluster domain Slip_1087 PF02913 FAD linked oxidases, C-terminal domain Slip_1087 PF01565 FAD binding domain Slip_1088 PF09861 Lactate racemase N-terminal domain Slip_1089 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Slip_1089 PF01565 FAD binding domain Slip_1090 PF00899 ThiF family Slip_1093 PF02310 B12 binding domain Slip_1093 PF04055 Radical SAM superfamily Slip_1094 PF00571 CBS domain Slip_1094 PF01368 DHH family Slip_1094 PF02833 DHHA2 domain Slip_1094 PF07085 DRTGG domain Slip_1095 PF02666 Phosphatidylserine decarboxylase Slip_1096 PF01066 CDP-alcohol phosphatidyltransferase Slip_1100 PF00912 Transglycosylase Slip_1100 PF00905 Penicillin binding protein transpeptidase domain Slip_1104 PF04015 Domain of unknown function (DUF362) Slip_1106 PF02254 TrkA-N domain Slip_1106 PF00999 Sodium/hydrogen exchanger family Slip_1107 PF17155 Gammaproteobacterial periplasmic sensor domain Slip_1107 PF00990 Diguanylate cyclase, GGDEF domain Slip_1112 PF06071 Protein of unknown function (DUF933) Slip_1112 PF01926 50S ribosome-binding GTPase Slip_1114 PF00365 Phosphofructokinase Slip_1116 PF13180 PDZ domain Slip_1118 PF17863 AAA lid domain Slip_1118 PF01078 Magnesium chelatase, subunit ChlI Slip_1119 PF13188 PAS domain Slip_1119 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Slip_1119 PF13426 PAS domain Slip_1119 PF00989 PAS fold Slip_1119 PF00512 His Kinase A (phospho-acceptor) domain Slip_1121 PF04463 Protein of unknown function (DUF523) Slip_1123 PF02645 Uncharacterised protein, DegV family COG1307 Slip_1125 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) Slip_1125 PF11867 Domain of unknown function (DUF3387) Slip_1125 PF18766 SWI2/SNF2 ATPase Slip_1126 PF01420 Type I restriction modification DNA specificity domain Slip_1127 PF02384 N-6 DNA Methylase Slip_1128 PF00239 Resolvase, N terminal domain Slip_1128 PF07508 Recombinase Slip_1128 PF13408 Recombinase zinc beta ribbon domain Slip_1131 PF01272 Transcription elongation factor, GreA/GreB, C-term Slip_1131 PF03449 Transcription elongation factor, N-terminal Slip_1139 PF03707 Bacterial signalling protein N terminal repeat Slip_1139 PF00990 Diguanylate cyclase, GGDEF domain Slip_1139 PF00563 EAL domain Slip_1142 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Slip_1151 PF00872 Transposase, Mutator family Slip_1159 PF05958 tRNA (Uracil-5-)-methyltransferase Slip_1159 PF01938 TRAM domain Slip_1160 PF00753 Metallo-beta-lactamase superfamily Slip_1163 PF03699 Uncharacterised protein family (UPF0182) Slip_1164 PF01048 Phosphorylase superfamily Slip_1165 PF04055 Radical SAM superfamily Slip_1166 PF02621 Menaquinone biosynthesis Slip_1167 PF04055 Radical SAM superfamily Slip_1170 PF01820 D-ala D-ala ligase N-terminus Slip_1170 PF07478 D-ala D-ala ligase C-terminus Slip_1171 PF02811 PHP domain Slip_1172 PF00005 ABC transporter Slip_1172 PF09383 NIL domain Slip_1173 PF02653 Branched-chain amino acid transport system / permease component Slip_1184 PF00482 Type II secretion system (T2SS), protein F Slip_1185 PF00437 Type II/IV secretion system protein Slip_1186 PF00114 Pilin (bacterial filament) Slip_1186 PF07963 Prokaryotic N-terminal methylation motif Slip_1187 PF01478 Type IV leader peptidase family Slip_1187 PF06750 Bacterial Peptidase A24 N-terminal domain Slip_1188 PF00437 Type II/IV secretion system protein Slip_1191 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Slip_1195 PF01144 Coenzyme A transferase Slip_1198 PF02754 Cysteine-rich domain Slip_1200 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Slip_1203 PF02954 Bacterial regulatory protein, Fis family Slip_1203 PF00989 PAS fold Slip_1203 PF00158 Sigma-54 interaction domain Slip_1205 PF00850 Histone deacetylase domain Slip_1206 PF03144 Elongation factor Tu domain 2 Slip_1206 PF14492 Elongation Factor G, domain II Slip_1206 PF03764 Elongation factor G, domain IV Slip_1206 PF00009 Elongation factor Tu GTP binding domain Slip_1206 PF00679 Elongation factor G C-terminus Slip_1208 PF01975 Survival protein SurE Slip_1209 PF10502 Signal peptidase, peptidase S26 Slip_1211 PF01227 GTP cyclohydrolase I Slip_1212 PF04055 Radical SAM superfamily Slip_1214 PF06508 Queuosine biosynthesis protein QueC Slip_1215 PF01242 6-pyruvoyl tetrahydropterin synthase Slip_1217 PF02535 ZIP Zinc transporter Slip_1219 PF01925 Sulfite exporter TauE/SafE Slip_1220 PF00403 Heavy-metal-associated domain Slip_1223 PF00005 ABC transporter Slip_1223 PF13732 Domain of unknown function (DUF4162) Slip_1225 PF02254 TrkA-N domain Slip_1225 PF07885 Ion channel Slip_1228 PF05221 S-adenosyl-L-homocysteine hydrolase Slip_1228 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Slip_1230 PF12841 YvrJ protein family Slip_1233 PF00989 PAS fold Slip_1233 PF00158 Sigma-54 interaction domain Slip_1233 PF02954 Bacterial regulatory protein, Fis family Slip_1234 PF00378 Enoyl-CoA hydratase/isomerase Slip_1236 PF02803 Thiolase, C-terminal domain Slip_1236 PF00108 Thiolase, N-terminal domain Slip_1238 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Slip_1238 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Slip_1239 PF01144 Coenzyme A transferase Slip_1241 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Slip_1241 PF02770 Acyl-CoA dehydrogenase, middle domain Slip_1241 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Slip_1242 PF02515 CoA-transferase family III Slip_1243 PF02954 Bacterial regulatory protein, Fis family Slip_1243 PF00158 Sigma-54 interaction domain Slip_1243 PF00989 PAS fold Slip_1247 PF00069 Protein kinase domain Slip_1247 PF03793 PASTA domain Slip_1250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Slip_1250 PF00672 HAMP domain Slip_1250 PF02743 Cache domain Slip_1251 PF00990 Diguanylate cyclase, GGDEF domain Slip_1251 PF03707 Bacterial signalling protein N terminal repeat Slip_1251 PF00563 EAL domain Slip_1251 PF13188 PAS domain Slip_1256 PF10502 Signal peptidase, peptidase S26 Slip_1261 PF00072 Response regulator receiver domain Slip_1261 PF00196 Bacterial regulatory proteins, luxR family Slip_1270 PF00005 ABC transporter Slip_1281 PF01979 Amidohydrolase family Slip_1282 PF00596 Class II Aldolase and Adducin N-terminal domain Slip_1283 PF01008 Initiation factor 2 subunit family Slip_1284 PF01048 Phosphorylase superfamily Slip_1285 PF02881 SRP54-type protein, helical bundle domain Slip_1285 PF00448 SRP54-type protein, GTPase domain Slip_1286 PF06470 SMC proteins Flexible Hinge Domain Slip_1286 PF02463 RecF/RecN/SMC N terminal domain Slip_1287 PF08279 HTH domain Slip_1287 PF02237 Biotin protein ligase C terminal domain Slip_1287 PF03099 Biotin/lipoate A/B protein ligase family Slip_1289 PF14622 Ribonuclease-III-like Slip_1289 PF00035 Double-stranded RNA binding motif Slip_1290 PF02504 Fatty acid synthesis protein Slip_1291 PF01783 Ribosomal L32p protein family Slip_1297 PF00005 ABC transporter Slip_1298 PF00392 Bacterial regulatory proteins, gntR family Slip_1307 PF00486 Transcriptional regulatory protein, C terminal Slip_1307 PF00072 Response regulator receiver domain Slip_1311 PF13180 PDZ domain Slip_1312 PF00072 Response regulator receiver domain Slip_1313 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Slip_1313 PF02142 MGS-like domain Slip_1313 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Slip_1314 PF02646 RmuC family Slip_1315 PF01790 Prolipoprotein diacylglyceryl transferase Slip_1321 PF00211 Adenylate and Guanylate cyclase catalytic domain Slip_1321 PF00069 Protein kinase domain Slip_1325 PF00202 Aminotransferase class-III Slip_1326 PF00005 ABC transporter Slip_1327 PF00528 Binding-protein-dependent transport system inner membrane component Slip_1331 PF00348 Polyprenyl synthetase Slip_1332 PF10776 Protein of unknown function (DUF2600) Slip_1336 PF07833 Copper amine oxidase N-terminal domain Slip_1343 PF09827 CRISPR associated protein Cas2 Slip_1344 PF01867 CRISPR associated protein Cas1 Slip_1346 PF00271 Helicase conserved C-terminal domain Slip_1346 PF18019 HD domain Slip_1346 PF00270 DEAD/DEAH box helicase Slip_1361 PF00571 CBS domain Slip_1361 PF00478 IMP dehydrogenase / GMP reductase domain Slip_1362 PF09335 SNARE associated Golgi protein Slip_1365 PF00672 HAMP domain Slip_1365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Slip_1365 PF17202 Single cache domain 3 Slip_1370 PF05362 Lon protease (S16) C-terminal proteolytic domain Slip_1370 PF13654 AAA domain Slip_1371 PF12706 Beta-lactamase superfamily domain Slip_1372 PF00912 Transglycosylase Slip_1372 PF00905 Penicillin binding protein transpeptidase domain Slip_1373 PF01544 CorA-like Mg2+ transporter protein Slip_1374 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Slip_1374 PF07992 Pyridine nucleotide-disulphide oxidoreductase Slip_1379 PF06866 Protein of unknown function (DUF1256) Slip_1380 PF00155 Aminotransferase class I and II Slip_1383 PF17284 Spermidine synthase tetramerisation domain Slip_1384 PF00011 Hsp20/alpha crystallin family Slip_1386 PF03796 DnaB-like helicase C terminal domain Slip_1386 PF14528 LAGLIDADG-like domain Slip_1386 PF00772 DnaB-like helicase N terminal domain Slip_1388 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Slip_1388 PF10996 Beta-Casp domain Slip_1388 PF00753 Metallo-beta-lactamase superfamily Slip_1390 PF00155 Aminotransferase class I and II Slip_1391 PF01037 Lrp/AsnC ligand binding domain Slip_1392 PF07992 Pyridine nucleotide-disulphide oxidoreductase Slip_1392 PF04324 BFD-like [2Fe-2S] binding domain Slip_1396 PF07943 Penicillin-binding protein 5, C-terminal domain Slip_1396 PF00768 D-alanyl-D-alanine carboxypeptidase Slip_1397 PF01661 Macro domain Slip_1398 PF00293 NUDIX domain Slip_1399 PF03109 ABC1 family Slip_1401 PF02645 Uncharacterised protein, DegV family COG1307 Slip_1404 PF04255 Protein of unknown function (DUF433) Slip_1410 PF08281 Sigma-70, region 4 Slip_1410 PF04542 Sigma-70 region 2 Slip_1413 PF06725 3D domain Slip_1413 PF01476 LysM domain Slip_1414 PF01467 Cytidylyltransferase-like Slip_1415 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Slip_1415 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Slip_1416 PF02665 Nitrate reductase gamma subunit Slip_1416 PF02754 Cysteine-rich domain Slip_1416 PF13183 4Fe-4S dicluster domain Slip_1417 PF01012 Electron transfer flavoprotein domain Slip_1417 PF00766 Electron transfer flavoprotein FAD-binding domain Slip_1418 PF01012 Electron transfer flavoprotein domain Slip_1419 PF03705 CheR methyltransferase, all-alpha domain Slip_1419 PF01739 CheR methyltransferase, SAM binding domain Slip_1420 PF00202 Aminotransferase class-III Slip_1423 PF05402 Coenzyme PQQ synthesis protein D (PqqD) Slip_1423 PF13186 Iron-sulfur cluster-binding domain Slip_1423 PF04055 Radical SAM superfamily Slip_1424 PF00490 Delta-aminolevulinic acid dehydratase Slip_1425 PF06463 Molybdenum Cofactor Synthesis C Slip_1425 PF04055 Radical SAM superfamily Slip_1427 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Slip_1427 PF03900 Porphobilinogen deaminase, C-terminal domain Slip_1428 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Slip_1428 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Slip_1428 PF01488 Shikimate / quinate 5-dehydrogenase Slip_1429 PF10414 Sirohaem synthase dimerisation region Slip_1429 PF14824 Sirohaem biosynthesis protein central Slip_1429 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Slip_1430 PF02416 mttA/Hcf106 family Slip_1432 PF01292 Prokaryotic cytochrome b561 Slip_1433 PF09163 Formate dehydrogenase N, transmembrane Slip_1433 PF12800 4Fe-4S binding domain Slip_1433 PF13247 4Fe-4S dicluster domain Slip_1435 PF00902 Sec-independent protein translocase protein (TatC) Slip_1436 PF00348 Polyprenyl synthetase Slip_1439 PF01040 UbiA prenyltransferase family Slip_1440 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Slip_1442 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Slip_1443 PF01039 Carboxyl transferase domain Slip_1443 PF17848 Acetyl-coA carboxylase zinc finger domain Slip_1444 PF07977 FabA-like domain Slip_1445 PF00109 Beta-ketoacyl synthase, N-terminal domain Slip_1445 PF02801 Beta-ketoacyl synthase, C-terminal domain Slip_1446 PF00550 Phosphopantetheine attachment site Slip_1448 PF00698 Acyl transferase domain Slip_1449 PF03060 Nitronate monooxygenase Slip_1450 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Slip_1450 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Slip_1451 PF02675 S-adenosylmethionine decarboxylase Slip_1453 PF00300 Histidine phosphatase superfamily (branch 1) Slip_1458 PF00005 ABC transporter Slip_1459 PF01032 FecCD transport family Slip_1460 PF01497 Periplasmic binding protein Slip_1463 PF12557 Cob(I)alamin adenosyltransferase N terminal Slip_1463 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Slip_1464 PF02110 Hydroxyethylthiazole kinase family Slip_1465 PF00586 AIR synthase related protein, N-terminal domain Slip_1465 PF02769 AIR synthase related protein, C-terminal domain Slip_1467 PF00696 Amino acid kinase family Slip_1467 PF13840 ACT domain Slip_1468 PF03447 Homoserine dehydrogenase, NAD binding domain Slip_1468 PF00742 Homoserine dehydrogenase Slip_1468 PF01842 ACT domain Slip_1470 PF09547 Stage IV sporulation protein A (spore_IV_A) Slip_1471 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Slip_1471 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Slip_1472 PF02660 Glycerol-3-phosphate acyltransferase Slip_1473 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Slip_1473 PF01926 50S ribosome-binding GTPase Slip_1479 PF03772 Competence protein Slip_1479 PF13567 Domain of unknown function (DUF4131) Slip_1479 PF00753 Metallo-beta-lactamase superfamily Slip_1481 PF01070 FMN-dependent dehydrogenase Slip_1482 PF12804 MobA-like NTP transferase domain Slip_1484 PF02401 LytB protein Slip_1484 PF00575 S1 RNA binding domain Slip_1485 PF01553 Acyltransferase Slip_1486 PF02224 Cytidylate kinase Slip_1489 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain Slip_1489 PF17203 Single cache domain 3 Slip_1489 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Slip_1489 PF00989 PAS fold Slip_1490 PF03147 Ferredoxin-fold anticodon binding domain Slip_1490 PF03483 B3/4 domain Slip_1490 PF03147 Ferredoxin-fold anticodon binding domain Slip_1490 PF03484 tRNA synthetase B5 domain Slip_1490 PF01588 Putative tRNA binding domain Slip_1490 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Slip_1490 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Slip_1490 PF03483 B3/4 domain Slip_1490 PF01588 Putative tRNA binding domain Slip_1490 PF03484 tRNA synthetase B5 domain Slip_1491 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Slip_1491 PF01409 tRNA synthetases class II core domain (F) Slip_1492 PF08032 RNA 2'-O ribose methyltransferase substrate binding Slip_1492 PF00588 SpoU rRNA Methylase family Slip_1493 PF02254 TrkA-N domain Slip_1493 PF02080 TrkA-C domain Slip_1494 PF02386 Cation transport protein Slip_1495 PF00453 Ribosomal protein L20 Slip_1496 PF01632 Ribosomal protein L35 Slip_1497 PF00707 Translation initiation factor IF-3, C-terminal domain Slip_1497 PF05198 Translation initiation factor IF-3, N-terminal domain Slip_1498 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Slip_1498 PF03129 Anticodon binding domain Slip_1498 PF02824 TGS domain Slip_1498 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Slip_1499 PF01145 SPFH domain / Band 7 family Slip_1502 PF13739 Deacetylase PdaC Slip_1502 PF11738 Protein of unknown function (DUF3298) Slip_1502 PF01522 Polysaccharide deacetylase Slip_1504 PF00005 ABC transporter Slip_1506 PF00535 Glycosyl transferase family 2 Slip_1508 PF02735 Ku70/Ku80 beta-barrel domain Slip_1509 PF04679 ATP dependent DNA ligase C terminal region Slip_1509 PF01068 ATP dependent DNA ligase domain Slip_1510 PF01068 ATP dependent DNA ligase domain Slip_1512 PF11738 Protein of unknown function (DUF3298) Slip_1512 PF13739 Deacetylase PdaC Slip_1512 PF01522 Polysaccharide deacetylase Slip_1513 PF01522 Polysaccharide deacetylase Slip_1517 PF03471 Transporter associated domain Slip_1517 PF01595 Cyclin M transmembrane N-terminal domain Slip_1517 PF00571 CBS domain Slip_1521 PF01471 Putative peptidoglycan binding domain Slip_1521 PF01520 N-acetylmuramoyl-L-alanine amidase Slip_1522 PF01894 Uncharacterised protein family UPF0047 Slip_1523 PF13482 RNase_H superfamily Slip_1524 PF00270 DEAD/DEAH box helicase Slip_1524 PF09369 Domain of unknown function (DUF1998) Slip_1524 PF00271 Helicase conserved C-terminal domain Slip_1527 PF00005 ABC transporter Slip_1529 PF13533 Biotin-lipoyl like Slip_1530 PF02190 ATP-dependent protease La (LON) substrate-binding domain Slip_1530 PF00004 ATPase family associated with various cellular activities (AAA) Slip_1530 PF05362 Lon protease (S16) C-terminal proteolytic domain Slip_1533 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Slip_1533 PF02256 Iron hydrogenase small subunit Slip_1533 PF00037 4Fe-4S binding domain Slip_1533 PF02906 Iron only hydrogenase large subunit, C-terminal domain Slip_1534 PF02906 Iron only hydrogenase large subunit, C-terminal domain Slip_1534 PF00037 4Fe-4S binding domain Slip_1535 PF03023 Lipid II flippase MurJ Slip_1536 PF00753 Metallo-beta-lactamase superfamily Slip_1536 PF00258 Flavodoxin Slip_1537 PF06397 Desulfoferrodoxin, N-terminal domain Slip_1537 PF01880 Desulfoferrodoxin Slip_1542 PF09827 CRISPR associated protein Cas2 Slip_1543 PF01867 CRISPR associated protein Cas1 Slip_1547 PF09704 CRISPR-associated protein (Cas_Cas5) Slip_1548 PF00271 Helicase conserved C-terminal domain Slip_1548 PF18019 HD domain Slip_1548 PF00270 DEAD/DEAH box helicase Slip_1551 PF17284 Spermidine synthase tetramerisation domain Slip_1552 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Slip_1552 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Slip_1553 PF03466 LysR substrate binding domain Slip_1553 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Slip_1554 PF01458 Uncharacterized protein family (UPF0051) Slip_1555 PF08402 TOBE domain Slip_1555 PF00005 ABC transporter Slip_1557 PF07664 Ferrous iron transport protein B C terminus Slip_1557 PF02421 Ferrous iron transport protein B Slip_1557 PF07670 Nucleoside recognition Slip_1558 PF01475 Ferric uptake regulator family Slip_1559 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Slip_1559 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Slip_1561 PF00117 Glutamine amidotransferase class-I Slip_1561 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Slip_1564 PF13247 4Fe-4S dicluster domain Slip_1564 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Slip_1564 PF07992 Pyridine nucleotide-disulphide oxidoreductase Slip_1565 PF13187 4Fe-4S dicluster domain Slip_1565 PF01645 Conserved region in glutamate synthase Slip_1566 PF00310 Glutamine amidotransferases class-II Slip_1567 PF03951 Glutamine synthetase, beta-Grasp domain Slip_1567 PF00120 Glutamine synthetase, catalytic domain Slip_1568 PF00072 Response regulator receiver domain Slip_1568 PF03861 ANTAR domain Slip_1569 PF03951 Glutamine synthetase, beta-Grasp domain Slip_1569 PF00120 Glutamine synthetase, catalytic domain Slip_1570 PF02540 NAD synthase Slip_1570 PF00795 Carbon-nitrogen hydrolase Slip_1571 PF00909 Ammonium Transporter Family Slip_1572 PF00543 Nitrogen regulatory protein P-II Slip_1573 PF00733 Asparagine synthase Slip_1573 PF13537 Glutamine amidotransferase domain Slip_1574 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Slip_1574 PF01926 50S ribosome-binding GTPase Slip_1575 PF00206 Lyase Slip_1575 PF10415 Fumarase C C-terminus Slip_1577 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Slip_1577 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Slip_1577 PF02142 MGS-like domain Slip_1581 PF02811 PHP domain Slip_1584 PF03205 Molybdopterin guanine dinucleotide synthesis protein B Slip_1586 PF00216 Bacterial DNA-binding protein Slip_1590 PF01966 HD domain Slip_1590 PF11871 Domain of unknown function (DUF3391) Slip_1591 PF01784 NIF3 (NGG1p interacting factor 3) Slip_1594 PF01555 DNA methylase Slip_1605 PF00665 Integrase core domain Slip_1606 PF01695 IstB-like ATP binding protein Slip_1608 PF01471 Putative peptidoglycan binding domain Slip_1608 PF13401 AAA domain Slip_1620 PF00140 Sigma-70 factor, region 1.2 Slip_1620 PF04542 Sigma-70 region 2 Slip_1620 PF04539 Sigma-70 region 3 Slip_1620 PF03979 Sigma-70 factor, region 1.1 Slip_1620 PF04545 Sigma-70, region 4 Slip_1621 PF08275 DNA primase catalytic core, N-terminal domain Slip_1621 PF10410 DnaB-helicase binding domain of primase Slip_1621 PF01807 CHC2 zinc finger Slip_1622 PF13286 Phosphohydrolase-associated domain Slip_1622 PF01966 HD domain Slip_1624 PF01471 Putative peptidoglycan binding domain Slip_1624 PF01510 N-acetylmuramoyl-L-alanine amidase Slip_1625 PF02896 PEP-utilising enzyme, TIM barrel domain Slip_1625 PF00391 PEP-utilising enzyme, mobile domain Slip_1625 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Slip_1626 PF03618 Kinase/pyrophosphorylase Slip_1627 PF00571 CBS domain Slip_1627 PF08279 HTH domain Slip_1628 PF02092 Glycyl-tRNA synthetase beta subunit Slip_1628 PF05746 DALR anticodon binding domain Slip_1629 PF02091 Glycyl-tRNA synthetase alpha subunit Slip_1634 PF01791 DeoC/LacD family aldolase Slip_1635 PF07650 KH domain Slip_1635 PF01926 50S ribosome-binding GTPase Slip_1636 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Slip_1637 PF01219 Prokaryotic diacylglycerol kinase Slip_1638 PF02130 Uncharacterized protein family UPF0054 Slip_1639 PF07698 7TM receptor with intracellular HD hydrolase Slip_1639 PF07697 7TM-HD extracellular Slip_1639 PF01966 HD domain Slip_1640 PF02562 PhoH-like protein Slip_1642 PF07873 YabP family Slip_1643 PF00072 Response regulator receiver domain Slip_1643 PF01966 HD domain Slip_1644 PF01165 Ribosomal protein S21 Slip_1645 PF01230 HIT domain Slip_1647 PF01938 TRAM domain Slip_1647 PF00919 Uncharacterized protein family UPF0004 Slip_1647 PF04055 Radical SAM superfamily Slip_1648 PF04452 RNA methyltransferase Slip_1651 PF00012 Hsp70 protein Slip_1652 PF01025 GrpE Slip_1653 PF01628 HrcA protein C terminal domain Slip_1654 PF04055 Radical SAM superfamily Slip_1654 PF06969 HemN C-terminal domain Slip_1655 PF00679 Elongation factor G C-terminus Slip_1655 PF00009 Elongation factor Tu GTP binding domain Slip_1655 PF03144 Elongation factor Tu domain 2 Slip_1655 PF06421 GTP-binding protein LepA C-terminus Slip_1659 PF01649 Ribosomal protein S20 Slip_1661 PF02540 NAD synthase Slip_1662 PF00403 Heavy-metal-associated domain Slip_1663 PF02634 FdhD/NarQ family Slip_1666 PF00753 Metallo-beta-lactamase superfamily Slip_1666 PF13567 Domain of unknown function (DUF4131) Slip_1666 PF03772 Competence protein Slip_1667 PF10531 SLBB domain Slip_1668 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Slip_1668 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Slip_1669 PF08264 Anticodon-binding domain of tRNA Slip_1669 PF00133 tRNA synthetases class I (I, L, M and V) Slip_1669 PF13603 Leucyl-tRNA synthetase, Domain 2 Slip_1669 PF09334 tRNA synthetases class I (M) Slip_1670 PF17853 GGDEF-like domain Slip_1670 PF13556 PucR C-terminal helix-turn-helix domain Slip_1671 PF13426 PAS domain Slip_1671 PF02954 Bacterial regulatory protein, Fis family Slip_1671 PF00158 Sigma-54 interaction domain Slip_1672 PF00890 FAD binding domain Slip_1672 PF14537 Cytochrome c3 Slip_1673 PF00665 Integrase core domain Slip_1676 PF05140 ResB-like family Slip_1677 PF01578 Cytochrome C assembly protein Slip_1678 PF01476 LysM domain Slip_1678 PF01471 Putative peptidoglycan binding domain Slip_1678 PF01510 N-acetylmuramoyl-L-alanine amidase Slip_1680 PF01966 HD domain Slip_1681 PF01467 Cytidylyltransferase-like Slip_1683 PF00291 Pyridoxal-phosphate dependent enzyme Slip_1685 PF00171 Aldehyde dehydrogenase family Slip_1686 PF13193 AMP-binding enzyme C-terminal domain Slip_1686 PF00501 AMP-binding enzyme Slip_1687 PF03600 Citrate transporter Slip_1690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Slip_1691 PF10145 Phage-related minor tail protein Slip_1691 PF01551 Peptidase family M23 Slip_1691 PF01464 Transglycosylase SLT domain Slip_1692 PF01121 Dephospho-CoA kinase Slip_1693 PF02659 Putative manganese efflux pump Slip_1694 PF06827 Zinc finger found in FPG and IleRS Slip_1694 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Slip_1694 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Slip_1695 PF01367 5'-3' exonuclease, C-terminal SAM fold Slip_1695 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Slip_1695 PF00476 DNA polymerase family A Slip_1696 PF11967 Recombination protein O N terminal Slip_1696 PF02565 Recombination protein O C terminal Slip_1701 PF00391 PEP-utilising enzyme, mobile domain Slip_1701 PF00224 Pyruvate kinase, barrel domain Slip_1701 PF02887 Pyruvate kinase, alpha/beta domain Slip_1702 PF00365 Phosphofructokinase Slip_1703 PF02081 Tryptophan RNA-binding attenuator protein Slip_1704 PF07733 Bacterial DNA polymerase III alpha NTPase domain Slip_1704 PF02811 PHP domain Slip_1704 PF14579 Helix-hairpin-helix motif Slip_1704 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Slip_1713 PF03618 Kinase/pyrophosphorylase Slip_1714 PF02654 Cobalamin-5-phosphate synthase Slip_1716 PF00293 NUDIX domain Slip_1717 PF00488 MutS domain V Slip_1717 PF01713 Smr domain Slip_1721 PF09335 SNARE associated Golgi protein Slip_1723 PF02811 PHP domain Slip_1723 PF14716 Helix-hairpin-helix domain Slip_1723 PF14791 DNA polymerase beta thumb Slip_1724 PF05164 Cell division protein ZapA Slip_1726 PF03705 CheR methyltransferase, all-alpha domain Slip_1726 PF01739 CheR methyltransferase, SAM binding domain Slip_1728 PF02895 Signal transducing histidine kinase, homodimeric domain Slip_1728 PF07194 P2 response regulator binding domain Slip_1728 PF01584 CheW-like domain Slip_1728 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Slip_1728 PF01627 Hpt domain Slip_1729 PF13614 AAA domain Slip_1731 PF00012 Hsp70 protein Slip_1732 PF17202 Single cache domain 3 Slip_1732 PF00672 HAMP domain Slip_1732 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Slip_1733 PF01584 CheW-like domain Slip_1734 PF01339 CheB methylesterase Slip_1734 PF00072 Response regulator receiver domain Slip_1735 PF00072 Response regulator receiver domain Slip_1737 PF13690 Chemotaxis phosphatase CheX Slip_1739 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Slip_1739 PF17202 Single cache domain 3 Slip_1739 PF00672 HAMP domain Slip_1740 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Slip_1741 PF02153 Prephenate dehydrogenase Slip_1742 PF00793 DAHP synthetase I family Slip_1742 PF18152 DAHP synthase ferredoxin-like domain Slip_1744 PF01475 Ferric uptake regulator family Slip_1745 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment Slip_1745 PF01297 Zinc-uptake complex component A periplasmic Slip_1746 PF00005 ABC transporter Slip_1747 PF00950 ABC 3 transport family Slip_1748 PF00793 DAHP synthetase I family Slip_1748 PF18152 DAHP synthase ferredoxin-like domain Slip_1749 PF00290 Tryptophan synthase alpha chain Slip_1750 PF00291 Pyridoxal-phosphate dependent enzyme Slip_1751 PF00218 Indole-3-glycerol phosphate synthase Slip_1752 PF00591 Glycosyl transferase family, a/b domain Slip_1752 PF02885 Glycosyl transferase family, helical bundle domain Slip_1753 PF00117 Glutamine amidotransferase class-I Slip_1755 PF00392 Bacterial regulatory proteins, gntR family Slip_1756 PF00005 ABC transporter Slip_1758 PF12849 PBP superfamily domain Slip_1759 PF00005 ABC transporter Slip_1760 PF00528 Binding-protein-dependent transport system inner membrane component Slip_1764 PF14821 Threonine synthase N terminus Slip_1764 PF00291 Pyridoxal-phosphate dependent enzyme Slip_1765 PF00795 Carbon-nitrogen hydrolase Slip_1766 PF07736 Chorismate mutase type I Slip_1769 PF00731 AIR carboxylase Slip_1775 PF04041 beta-1,4-mannooligosaccharide phosphorylase Slip_1776 PF08668 HDOD domain Slip_1778 PF01479 S4 domain Slip_1778 PF00849 RNA pseudouridylate synthase Slip_1780 PF01979 Amidohydrolase family Slip_1781 PF07722 Peptidase C26 Slip_1782 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system Slip_1783 PF01402 Ribbon-helix-helix protein, copG family Slip_1784 PF00842 Alanine racemase, C-terminal domain Slip_1784 PF01168 Alanine racemase, N-terminal domain Slip_1785 PF00478 IMP dehydrogenase / GMP reductase domain Slip_1785 PF00571 CBS domain Slip_1786 PF01256 Carbohydrate kinase Slip_1786 PF03853 YjeF-related protein N-terminus Slip_1787 PF01648 4'-phosphopantetheinyl transferase superfamily Slip_1789 PF01584 CheW-like domain Slip_1790 PF00107 Zinc-binding dehydrogenase Slip_1790 PF08240 Alcohol dehydrogenase GroES-like domain Slip_1792 PF12729 Four helix bundle sensory module for signal transduction Slip_1792 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Slip_1792 PF00672 HAMP domain Slip_1793 PF00072 Response regulator receiver domain Slip_1795 PF06114 IrrE N-terminal-like domain Slip_1797 PF02899 Phage integrase, N-terminal SAM-like domain Slip_1797 PF00589 Phage integrase family Slip_1810 PF01464 Transglycosylase SLT domain Slip_1820 PF01695 IstB-like ATP binding protein Slip_1836 PF01381 Helix-turn-helix Slip_1841 PF01668 SmpB protein Slip_1842 PF00575 S1 RNA binding domain Slip_1842 PF17876 Cold shock domain Slip_1842 PF00773 RNB domain Slip_1842 PF08206 Ribonuclease B OB domain Slip_1845 PF03030 Inorganic H+ pyrophosphatase Slip_1846 PF03840 Preprotein translocase SecG subunit Slip_1847 PF03952 Enolase, N-terminal domain Slip_1847 PF00113 Enolase, C-terminal TIM barrel domain Slip_1849 PF01676 Metalloenzyme superfamily Slip_1849 PF06415 BPG-independent PGAM N-terminus (iPGM_N) Slip_1850 PF00121 Triosephosphate isomerase Slip_1851 PF00162 Phosphoglycerate kinase Slip_1852 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Slip_1852 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Slip_1853 PF04198 Putative sugar-binding domain Slip_1854 PF00309 Sigma-54 factor, Activator interacting domain (AID) Slip_1854 PF04963 Sigma-54 factor, core binding domain Slip_1854 PF04552 Sigma-54, DNA binding domain Slip_1855 PF14527 WhiA LAGLIDADG-like domain Slip_1855 PF10298 WhiA N-terminal LAGLIDADG-like domain Slip_1855 PF02650 WhiA C-terminal HTH domain Slip_1856 PF01933 Uncharacterised protein family UPF0052 Slip_1857 PF03668 P-loop ATPase protein family Slip_1858 PF10432 Bacterial phospho-glucose isomerase C-terminal SIS domain Slip_1858 PF01380 SIS domain Slip_1859 PF00480 ROK family Slip_1863 PF01541 GIY-YIG catalytic domain Slip_1863 PF02151 UvrB/uvrC motif Slip_1863 PF08459 UvrC Helix-hairpin-helix N-terminal Slip_1864 PF17760 UvrA interaction domain Slip_1864 PF17755 UvrA DNA-binding domain Slip_1865 PF04851 Type III restriction enzyme, res subunit Slip_1865 PF17757 UvrB interaction domain Slip_1865 PF02151 UvrB/uvrC motif Slip_1865 PF12344 Ultra-violet resistance protein B Slip_1865 PF00271 Helicase conserved C-terminal domain Slip_1867 PF00595 PDZ domain Slip_1867 PF13180 PDZ domain Slip_1868 PF13180 PDZ domain Slip_1868 PF03572 Peptidase family S41 Slip_1870 PF01464 Transglycosylase SLT domain Slip_1870 PF01551 Peptidase family M23 Slip_1870 PF10145 Phage-related minor tail protein Slip_1871 PF02687 FtsX-like permease family Slip_1871 PF18075 FtsX extracellular domain Slip_1872 PF00005 ABC transporter Slip_1873 PF02780 Transketolase, C-terminal domain Slip_1873 PF02779 Transketolase, pyrimidine binding domain Slip_1874 PF00456 Transketolase, thiamine diphosphate binding domain Slip_1876 PF13677 Membrane MotB of proton-channel complex MotA/MotB Slip_1876 PF00691 OmpA family Slip_1877 PF01618 MotA/TolQ/ExbB proton channel family Slip_1878 PF01043 SecA preprotein cross-linking domain Slip_1878 PF07517 SecA DEAD-like domain Slip_1878 PF02810 SEC-C motif Slip_1878 PF07516 SecA Wing and Scaffold domain Slip_1879 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Slip_1879 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus Slip_1882 PF02561 Flagellar protein FliS Slip_1885 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) Slip_1885 PF06594 Haemolysin-type calcium binding protein related domain Slip_1886 PF01850 PIN domain Slip_1887 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Slip_1898 PF00700 Bacterial flagellin C-terminal helical region Slip_1898 PF00669 Bacterial flagellin N-terminal helical region Slip_1903 PF00700 Bacterial flagellin C-terminal helical region Slip_1903 PF00669 Bacterial flagellin N-terminal helical region Slip_1904 PF07196 Flagellin hook IN motif Slip_1904 PF07195 Flagellar hook-associated protein 2 C-terminus Slip_1904 PF02465 Flagellar hook-associated protein 2 N-terminus Slip_1905 PF02599 Global regulator protein family Slip_1906 PF02623 FliW protein Slip_1909 PF00700 Bacterial flagellin C-terminal helical region Slip_1909 PF00669 Bacterial flagellin N-terminal helical region Slip_1910 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Slip_1910 PF00460 Flagella basal body rod protein Slip_1919 PF00437 Type II/IV secretion system protein Slip_1920 PF00072 Response regulator receiver domain Slip_1920 PF00196 Bacterial regulatory proteins, luxR family Slip_1927 PF00072 Response regulator receiver domain Slip_1927 PF00196 Bacterial regulatory proteins, luxR family Slip_1929 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Slip_1929 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Slip_1929 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Slip_1929 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Slip_1945 PF00145 C-5 cytosine-specific DNA methylase Slip_1947 PF14815 NUDIX domain Slip_1947 PF00730 HhH-GPD superfamily base excision DNA repair protein Slip_1947 PF00633 Helix-hairpin-helix motif Slip_1949 PF07508 Recombinase Slip_1949 PF00239 Resolvase, N terminal domain Slip_1949 PF13408 Recombinase zinc beta ribbon domain Slip_1950 PF04239 Protein of unknown function (DUF421) Slip_1951 PF02350 UDP-N-acetylglucosamine 2-epimerase Slip_1953 PF00483 Nucleotidyl transferase Slip_1955 PF08359 YsiA-like protein, C-terminal region Slip_1955 PF00440 Bacterial regulatory proteins, tetR family Slip_1956 PF00873 AcrB/AcrD/AcrF family Slip_1957 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Slip_1957 PF00529 HlyD membrane-fusion protein of T1SS Slip_1965 PF08281 Sigma-70, region 4 Slip_1965 PF04542 Sigma-70 region 2 Slip_1968 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system Slip_1975 PF14659 Phage integrase, N-terminal SAM-like domain Slip_1975 PF00589 Phage integrase family Slip_1976 PF13614 AAA domain Slip_1980 PF02867 Ribonucleotide reductase, barrel domain Slip_1980 PF00317 Ribonucleotide reductase, all-alpha domain Slip_1980 PF03477 ATP cone domain Slip_1981 PF02515 CoA-transferase family III Slip_1982 PF01144 Coenzyme A transferase Slip_1983 PF01144 Coenzyme A transferase Slip_1985 PF00108 Thiolase, N-terminal domain Slip_1985 PF02803 Thiolase, C-terminal domain Slip_1987 PF00106 short chain dehydrogenase Slip_1988 PF00108 Thiolase, N-terminal domain Slip_1988 PF02803 Thiolase, C-terminal domain Slip_1989 PF00378 Enoyl-CoA hydratase/isomerase Slip_1990 PF00158 Sigma-54 interaction domain Slip_1990 PF02954 Bacterial regulatory protein, Fis family Slip_1990 PF00989 PAS fold Slip_1992 PF06463 Molybdenum Cofactor Synthesis C Slip_1992 PF04055 Radical SAM superfamily Slip_1997 PF00440 Bacterial regulatory proteins, tetR family Slip_2001 PF11849 Domain of unknown function (DUF3369) Slip_2005 PF00350 Dynamin family Slip_2010 PF04002 RadC-like JAB domain Slip_2010 PF12826 Helix-hairpin-helix motif Slip_2021 PF17866 AAA lid domain Slip_2021 PF00004 ATPase family associated with various cellular activities (AAA) Slip_2023 PF04307 LexA-binding, inner membrane-associated putative hydrolase Slip_2037 PF00216 Bacterial DNA-binding protein Slip_2041 PF01807 CHC2 zinc finger Slip_2041 PF08275 DNA primase catalytic core, N-terminal domain Slip_2041 PF00772 DnaB-like helicase N terminal domain Slip_2046 PF00589 Phage integrase family Slip_2046 PF02899 Phage integrase, N-terminal SAM-like domain Slip_2049 PF01725 Ham1 family Slip_2050 PF03725 3' exoribonuclease family, domain 2 Slip_2050 PF01138 3' exoribonuclease family, domain 1 Slip_2051 PF05681 Fumarate hydratase (Fumerase) Slip_2051 PF05683 Fumarase C-terminus Slip_2053 PF12706 Beta-lactamase superfamily domain Slip_2054 PF01869 BadF/BadG/BcrA/BcrD ATPase family Slip_2055 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component Slip_2056 PF01177 Asp/Glu/Hydantoin racemase Slip_2059 PF01078 Magnesium chelatase, subunit ChlI Slip_2059 PF17863 AAA lid domain Slip_2061 PF04397 LytTr DNA-binding domain Slip_2061 PF00072 Response regulator receiver domain Slip_2063 PF04055 Radical SAM superfamily Slip_2063 PF06463 Molybdenum Cofactor Synthesis C Slip_2064 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Slip_2064 PF07992 Pyridine nucleotide-disulphide oxidoreductase Slip_2067 PF00202 Aminotransferase class-III Slip_2069 PF00111 2Fe-2S iron-sulfur cluster binding domain Slip_2069 PF00175 Oxidoreductase NAD-binding domain Slip_2069 PF00970 Oxidoreductase FAD-binding domain Slip_2076 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Slip_2076 PF07992 Pyridine nucleotide-disulphide oxidoreductase Slip_2077 PF00970 Oxidoreductase FAD-binding domain Slip_2077 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Slip_2077 PF00175 Oxidoreductase NAD-binding domain Slip_2078 PF01513 ATP-NAD kinase Slip_2079 PF00037 4Fe-4S binding domain Slip_2080 PF02954 Bacterial regulatory protein, Fis family Slip_2080 PF00158 Sigma-54 interaction domain Slip_2080 PF13426 PAS domain Slip_2082 PF00083 Sugar (and other) transporter Slip_2083 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Slip_2083 PF02770 Acyl-CoA dehydrogenase, middle domain Slip_2083 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Slip_2084 PF02515 CoA-transferase family III Slip_2085 PF00108 Thiolase, N-terminal domain Slip_2085 PF02803 Thiolase, C-terminal domain Slip_2088 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Slip_2088 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Slip_2089 PF00378 Enoyl-CoA hydratase/isomerase Slip_2090 PF01575 MaoC like domain Slip_2091 PF00582 Universal stress protein family Slip_2092 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Slip_2093 PF01078 Magnesium chelatase, subunit ChlI Slip_2093 PF17863 AAA lid domain Slip_2097 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Slip_2097 PF01568 Molydopterin dinucleotide binding domain Slip_2097 PF00384 Molybdopterin oxidoreductase Slip_2097 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Slip_2098 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Slip_2098 PF00037 4Fe-4S binding domain Slip_2098 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Slip_2101 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Slip_2101 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Slip_2102 PF12800 4Fe-4S binding domain Slip_2102 PF13247 4Fe-4S dicluster domain Slip_2103 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Slip_2103 PF07992 Pyridine nucleotide-disulphide oxidoreductase Slip_2104 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Slip_2104 PF00175 Oxidoreductase NAD-binding domain Slip_2105 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase Slip_2106 PF03186 CobD/Cbib protein Slip_2107 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Slip_2107 PF07685 CobB/CobQ-like glutamine amidotransferase domain Slip_2109 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Slip_2109 PF02770 Acyl-CoA dehydrogenase, middle domain Slip_2109 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Slip_2110 PF01012 Electron transfer flavoprotein domain Slip_2111 PF01012 Electron transfer flavoprotein domain Slip_2111 PF00766 Electron transfer flavoprotein FAD-binding domain Slip_2116 PF07517 SecA DEAD-like domain Slip_2116 PF07516 SecA Wing and Scaffold domain Slip_2116 PF01043 SecA preprotein cross-linking domain Slip_2116 PF02810 SEC-C motif Slip_2118 PF00543 Nitrogen regulatory protein P-II Slip_2119 PF00909 Ammonium Transporter Family Slip_2120 PF00117 Glutamine amidotransferase class-I Slip_2120 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Slip_2121 PF03459 TOBE domain Slip_2121 PF00005 ABC transporter Slip_2122 PF00528 Binding-protein-dependent transport system inner membrane component Slip_2124 PF04055 Radical SAM superfamily Slip_2124 PF02579 Dinitrogenase iron-molybdenum cofactor Slip_2127 PF00148 Nitrogenase component 1 type Oxidoreductase Slip_2128 PF00543 Nitrogen regulatory protein P-II Slip_2129 PF00543 Nitrogen regulatory protein P-II Slip_2130 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Slip_2131 PF13426 PAS domain Slip_2131 PF08447 PAS fold Slip_2131 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Slip_2132 PF10388 EAL-domain associated signalling protein domain Slip_2132 PF00563 EAL domain Slip_2135 PF01380 SIS domain Slip_2136 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Slip_2136 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Slip_2136 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Slip_2136 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Slip_2139 PF02457 DisA bacterial checkpoint controller nucleotide-binding Slip_2140 PF01904 Protein of unknown function DUF72 Slip_2141 PF14579 Helix-hairpin-helix motif Slip_2141 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Slip_2141 PF02811 PHP domain Slip_2141 PF07733 Bacterial DNA polymerase III alpha NTPase domain Slip_2143 PF00817 impB/mucB/samB family Slip_2143 PF11798 IMS family HHH motif Slip_2143 PF11799 impB/mucB/samB family C-terminal domain Slip_2150 PF01139 tRNA-splicing ligase RtcB Slip_2155 PF08502 LeuA allosteric (dimerisation) domain Slip_2155 PF00682 HMGL-like Slip_2156 PF00180 Isocitrate/isopropylmalate dehydrogenase Slip_2157 PF00694 Aconitase C-terminal domain Slip_2158 PF00330 Aconitase family (aconitate hydratase) Slip_2159 PF08502 LeuA allosteric (dimerisation) domain Slip_2159 PF00682 HMGL-like Slip_2160 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Slip_2160 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Slip_2161 PF10369 Small subunit of acetolactate synthase Slip_2161 PF01842 ACT domain Slip_2162 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Slip_2162 PF00205 Thiamine pyrophosphate enzyme, central domain Slip_2162 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Slip_2163 PF00920 Dehydratase family Slip_2164 PF01063 Amino-transferase class IV Slip_2166 PF00072 Response regulator receiver domain Slip_2171 PF00206 Lyase Slip_2171 PF14698 Argininosuccinate lyase C-terminal Slip_2172 PF00764 Arginosuccinate synthase Slip_2174 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Slip_2174 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Slip_2175 PF00202 Aminotransferase class-III Slip_2176 PF00696 Amino acid kinase family Slip_2177 PF01960 ArgJ family Slip_2178 PF01118 Semialdehyde dehydrogenase, NAD binding domain Slip_2178 PF02774 Semialdehyde dehydrogenase, dimerisation domain Slip_2179 PF13847 Methyltransferase domain Slip_2182 PF03099 Biotin/lipoate A/B protein ligase family Slip_2183 PF04055 Radical SAM superfamily Slip_2184 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Slip_2184 PF07992 Pyridine nucleotide-disulphide oxidoreductase Slip_2188 PF01597 Glycine cleavage H-protein Slip_2189 PF01758 Sodium Bile acid symporter family Slip_2191 PF01925 Sulfite exporter TauE/SafE Slip_2192 PF01022 Bacterial regulatory protein, arsR family Slip_2197 PF00378 Enoyl-CoA hydratase/isomerase Slip_2200 PF01520 N-acetylmuramoyl-L-alanine amidase Slip_2200 PF04122 Putative cell wall binding repeat 2 Slip_2201 PF00380 Ribosomal protein S9/S16 Slip_2202 PF00572 Ribosomal protein L13 Slip_2203 PF01416 tRNA pseudouridine synthase Slip_2204 PF02361 Cobalt transport protein Slip_2205 PF00005 ABC transporter Slip_2206 PF00005 ABC transporter Slip_2207 PF01196 Ribosomal protein L17 Slip_2208 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Slip_2208 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Slip_2208 PF01000 RNA polymerase Rpb3/RpoA insert domain Slip_2209 PF00163 Ribosomal protein S4/S9 N-terminal domain Slip_2209 PF01479 S4 domain Slip_2210 PF00411 Ribosomal protein S11 Slip_2211 PF00416 Ribosomal protein S13/S18 Slip_2212 PF00444 Ribosomal protein L36 Slip_2213 PF01176 Translation initiation factor 1A / IF-1 Slip_2215 PF00557 Metallopeptidase family M24 Slip_2216 PF05191 Adenylate kinase, active site lid Slip_2217 PF00344 SecY translocase Slip_2218 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Slip_2219 PF00327 Ribosomal protein L30p/L7e Slip_2220 PF00333 Ribosomal protein S5, N-terminal domain Slip_2220 PF03719 Ribosomal protein S5, C-terminal domain Slip_2221 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Slip_2222 PF00347 Ribosomal protein L6 Slip_2223 PF00410 Ribosomal protein S8 Slip_2224 PF00253 Ribosomal protein S14p/S29e Slip_2225 PF00673 ribosomal L5P family C-terminus Slip_2225 PF00281 Ribosomal protein L5 Slip_2226 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Slip_2226 PF00467 KOW motif Slip_2227 PF00238 Ribosomal protein L14p/L23e Slip_2228 PF00366 Ribosomal protein S17 Slip_2229 PF00831 Ribosomal L29 protein Slip_2230 PF00252 Ribosomal protein L16p/L10e Slip_2231 PF00189 Ribosomal protein S3, C-terminal domain Slip_2231 PF07650 KH domain Slip_2232 PF00237 Ribosomal protein L22p/L17e Slip_2233 PF00203 Ribosomal protein S19 Slip_2234 PF00181 Ribosomal Proteins L2, RNA binding domain Slip_2234 PF03947 Ribosomal Proteins L2, C-terminal domain Slip_2235 PF00276 Ribosomal protein L23 Slip_2236 PF00573 Ribosomal protein L4/L1 family Slip_2237 PF00297 Ribosomal protein L3 Slip_2238 PF00338 Ribosomal protein S10p/S20e Slip_2239 PF03144 Elongation factor Tu domain 2 Slip_2239 PF03143 Elongation factor Tu C-terminal domain Slip_2239 PF00009 Elongation factor Tu GTP binding domain Slip_2240 PF03144 Elongation factor Tu domain 2 Slip_2240 PF00009 Elongation factor Tu GTP binding domain Slip_2240 PF00679 Elongation factor G C-terminus Slip_2240 PF03764 Elongation factor G, domain IV Slip_2240 PF14492 Elongation Factor G, domain II Slip_2241 PF00177 Ribosomal protein S7p/S5e Slip_2242 PF00164 Ribosomal protein S12/S23 Slip_2243 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Slip_2244 PF04983 RNA polymerase Rpb1, domain 3 Slip_2244 PF05000 RNA polymerase Rpb1, domain 4 Slip_2244 PF04998 RNA polymerase Rpb1, domain 5 Slip_2244 PF04997 RNA polymerase Rpb1, domain 1 Slip_2244 PF00623 RNA polymerase Rpb1, domain 2 Slip_2245 PF04561 RNA polymerase Rpb2, domain 2 Slip_2245 PF04565 RNA polymerase Rpb2, domain 3 Slip_2245 PF00562 RNA polymerase Rpb2, domain 6 Slip_2245 PF04560 RNA polymerase Rpb2, domain 7 Slip_2245 PF04563 RNA polymerase beta subunit Slip_2245 PF10385 RNA polymerase beta subunit external 1 domain Slip_2247 PF00542 Ribosomal protein L7/L12 C-terminal domain Slip_2247 PF16320 Ribosomal protein L7/L12 dimerisation domain Slip_2248 PF00466 Ribosomal protein L10 Slip_2249 PF00687 Ribosomal protein L1p/L10e family Slip_2250 PF03946 Ribosomal protein L11, N-terminal domain Slip_2250 PF00298 Ribosomal protein L11, RNA binding domain Slip_2251 PF02357 Transcription termination factor nusG Slip_2251 PF00467 KOW motif Slip_2252 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Slip_2253 PF00471 Ribosomal protein L33 Slip_2254 PF04542 Sigma-70 region 2 Slip_2254 PF08281 Sigma-70, region 4 Slip_2255 PF05991 YacP-like NYN domain Slip_2256 PF00588 SpoU rRNA Methylase family Slip_2256 PF08032 RNA 2'-O ribose methyltransferase substrate binding Slip_2257 PF02511 Thymidylate synthase complementing protein Slip_2258 PF00636 Ribonuclease III domain Slip_2259 PF09190 DALR domain Slip_2259 PF01406 tRNA synthetases class I (C) catalytic domain Slip_2260 PF00132 Bacterial transferase hexapeptide (six repeats) Slip_2260 PF06426 Serine acetyltransferase, N-terminal Slip_2261 PF00749 tRNA synthetases class I (E and Q), catalytic domain Slip_2262 PF02542 YgbB family Slip_2263 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Slip_2266 PF02457 DisA bacterial checkpoint controller nucleotide-binding Slip_2266 PF10635 DisA bacterial checkpoint controller linker region Slip_2266 PF12826 Helix-hairpin-helix motif Slip_2267 PF18073 Rubredoxin metal binding domain Slip_2268 PF17871 AAA lid domain Slip_2268 PF10431 C-terminal, D2-small domain, of ClpB protein Slip_2268 PF07724 AAA domain (Cdc48 subfamily) Slip_2268 PF00004 ATPase family associated with various cellular activities (AAA) Slip_2268 PF02861 Clp amino terminal domain, pathogenicity island component Slip_2269 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain Slip_2270 PF02151 UvrB/uvrC motif Slip_2271 PF17727 CtsR C-terminal dimerization domain Slip_2271 PF05848 CtsR N-terminal HTH domain Slip_2272 PF02491 SHS2 domain inserted in FTSA Slip_2273 PF03808 Glycosyl transferase WecB/TagA/CpsF family Slip_2274 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Slip_2274 PF00460 Flagella basal body rod protein Slip_2276 PF12116 Stage III sporulation protein D Slip_2277 PF08486 Stage II sporulation protein Slip_2278 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Slip_2281 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Slip_2281 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Slip_2282 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Slip_2282 PF02874 ATP synthase alpha/beta family, beta-barrel domain Slip_2283 PF00231 ATP synthase Slip_2284 PF02874 ATP synthase alpha/beta family, beta-barrel domain Slip_2284 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Slip_2284 PF00306 ATP synthase alpha/beta chain, C terminal domain Slip_2285 PF00213 ATP synthase delta (OSCP) subunit Slip_2286 PF00430 ATP synthase B/B' CF(0) Slip_2287 PF00137 ATP synthase subunit C Slip_2288 PF00119 ATP synthase A chain Slip_2292 PF14437 MafB19-like deaminase Slip_2293 PF00464 Serine hydroxymethyltransferase Slip_2294 PF02502 Ribose/Galactose Isomerase Slip_2295 PF01451 Low molecular weight phosphotyrosine protein phosphatase Slip_2296 PF02659 Putative manganese efflux pump Slip_2297 PF01300 Telomere recombination Slip_2297 PF03481 Putative GTP-binding controlling metal-binding Slip_2298 PF17827 PrmC N-terminal domain Slip_2298 PF05175 Methyltransferase small domain Slip_2299 PF03462 PCRF domain Slip_2299 PF00472 RF-1 domain Slip_2300 PF07136 Protein of unknown function (DUF1385) Slip_2301 PF01197 Ribosomal protein L31 Slip_2303 PF00682 HMGL-like Slip_2305 PF01476 LysM domain Slip_2305 PF08525 Opacity-associated protein A N-terminal motif Slip_2305 PF01551 Peptidase family M23 Slip_2306 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Slip_2306 PF07498 Rho termination factor, N-terminal domain Slip_2306 PF07497 Rho termination factor, RNA-binding domain Slip_2308 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Slip_2309 PF00923 Transaldolase/Fructose-6-phosphate aldolase Slip_2310 PF01116 Fructose-bisphosphate aldolase class-II Slip_2311 PF00072 Response regulator receiver domain Slip_2313 PF01343 Peptidase family S49 Slip_2314 PF01168 Alanine racemase, N-terminal domain Slip_2314 PF00842 Alanine racemase, C-terminal domain Slip_2315 PF02388 FemAB family Slip_2316 PF00117 Glutamine amidotransferase class-I Slip_2316 PF06418 CTP synthase N-terminus Slip_2319 PF00750 tRNA synthetases class I (R) Slip_2319 PF05746 DALR anticodon binding domain Slip_2319 PF03485 Arginyl tRNA synthetase N terminal domain Slip_2322 PF00395 S-layer homology domain Slip_2326 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain Slip_2326 PF00749 tRNA synthetases class I (E and Q), catalytic domain Slip_2327 PF02590 Predicted SPOUT methyltransferase Slip_2329 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Slip_2331 PF07992 Pyridine nucleotide-disulphide oxidoreductase Slip_2332 PF10145 Phage-related minor tail protein Slip_2332 PF01551 Peptidase family M23 Slip_2332 PF01464 Transglycosylase SLT domain Slip_2339 PF07690 Major Facilitator Superfamily Slip_2340 PF07690 Major Facilitator Superfamily Slip_2341 PF13533 Biotin-lipoyl like Slip_2342 PF00440 Bacterial regulatory proteins, tetR family Slip_2343 PF00709 Adenylosuccinate synthetase Slip_2344 PF01281 Ribosomal protein L9, N-terminal domain Slip_2344 PF03948 Ribosomal protein L9, C-terminal domain Slip_2346 PF01084 Ribosomal protein S18 Slip_2347 PF00436 Single-strand binding protein family Slip_2348 PF01250 Ribosomal protein S6 Slip_2354 PF02127 Aminopeptidase I zinc metalloprotease (M18) Slip_2355 PF07827 KNTase C-terminal domain Slip_2357 PF00478 IMP dehydrogenase / GMP reductase domain Slip_2357 PF00571 CBS domain Slip_2358 PF00005 ABC transporter Slip_2359 PF12399 Branched-chain amino acid ATP-binding cassette transporter Slip_2359 PF00005 ABC transporter Slip_2360 PF02653 Branched-chain amino acid transport system / permease component Slip_2360 PF11862 Domain of unknown function (DUF3382) Slip_2361 PF02653 Branched-chain amino acid transport system / permease component Slip_2362 PF13458 Periplasmic binding protein Slip_2363 PF01869 BadF/BadG/BcrA/BcrD ATPase family Slip_2366 PF03144 Elongation factor Tu domain 2 Slip_2366 PF09106 Elongation factor SelB, winged helix Slip_2366 PF00009 Elongation factor Tu GTP binding domain Slip_2366 PF09105 Elongation factor SelB, winged helix Slip_2366 PF09107 Elongation factor SelB, winged helix Slip_2367 PF12390 Selenocysteine synthase N terminal Slip_2367 PF03841 L-seryl-tRNA selenium transferase Slip_2369 PF06866 Protein of unknown function (DUF1256) Slip_2370 PF01738 Dienelactone hydrolase family Slip_2370 PF00156 Phosphoribosyl transferase domain Slip_2374 PF01969 Protein of unknown function DUF111 Slip_2375 PF02195 ParB-like nuclease domain Slip_2375 PF17762 HTH domain found in ParB protein Slip_2376 PF13614 AAA domain Slip_2377 PF02195 ParB-like nuclease domain Slip_2377 PF17762 HTH domain found in ParB protein Slip_2378 PF02527 rRNA small subunit methyltransferase G Slip_2379 PF01134 Glucose inhibited division protein A Slip_2379 PF13932 GidA associated domain Slip_2380 PF01926 50S ribosome-binding GTPase Slip_2380 PF12631 MnmE helical domain Slip_2380 PF10396 GTP-binding protein TrmE N-terminus Slip_2381 PF01424 R3H domain Slip_2381 PF14804 Jag N-terminus Slip_2382 PF14849 YidC periplasmic domain Slip_2382 PF02096 60Kd inner membrane protein Slip_2383 PF01809 Putative membrane protein insertion efficiency factor Slip_2384 PF00825 Ribonuclease P Slip_2385 PF00468 Ribosomal protein L34 Slip_R0041 PF00239 Resolvase, N terminal domain