SYN_00015 SM00530 Helix-turn-helix XRE-family like proteins SYN_00017 SM00487 DEAD-like helicases superfamily SYN_00017 SM00490 helicase superfamily c-terminal domain SYN_00019 SM00357 Cold shock protein domain SYN_00020 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. SYN_00024 SM00382 ATPases associated with a variety of cellular activities SYN_00026 SM00271 DnaJ molecular chaperone homology domain SYN_00028 SM00883 Chaperonin 10 Kd subunit SYN_00034 SM00448 cheY-homologous receiver domain SYN_00037 SM00834 Putative regulatory protein SYN_00044 SM00028 Tetratricopeptide repeats SYN_00049 SM00881 CoA binding domain SYN_00051 SM00382 ATPases associated with a variety of cellular activities SYN_00054 SM00226 Low molecular weight phosphatase family SYN_00059 SM00382 ATPases associated with a variety of cellular activities SYN_00061 SM00091 PAS domain SYN_00061 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SYN_00061 SM00387 Histidine kinase-like ATPases SYN_00061 SM00388 His Kinase A (phosphoacceptor) domain SYN_00062 SM00883 Chaperonin 10 Kd subunit SYN_00063 SM00663 RNA polymerase I subunit A N-terminus SYN_00069 SM00649 Ribosomal protein L11/L12 SYN_00070 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. SYN_00070 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SYN_00075 SM00840 SYN_00075 SYN_00079 SM00382 ATPases associated with a variety of cellular activities SYN_00088 SM01329 SYN_00088 SYN_00090 SM00917 LeuA allosteric (dimerisation) domain SYN_00099 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYN_00099 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYN_00099 SM00091 PAS domain SYN_00099 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SYN_00105 SM01152 SYN_00105 SYN_00110 SM00271 DnaJ molecular chaperone homology domain SYN_00112 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYN_00112 SM00091 PAS domain SYN_00112 SM00421 helix_turn_helix, Lux Regulon SYN_00119 SM00990 SYN_00119 SYN_00122 SM00788 Adenylosuccinate synthetase SYN_00125 SM00382 ATPases associated with a variety of cellular activities SYN_00126 SM00382 ATPases associated with a variety of cellular activities SYN_00134 SM00028 Tetratricopeptide repeats SYN_00140 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain SYN_00141 SM01007 Class II Aldolase and Adducin N-terminal domain SYN_00143 SM00450 Rhodanese Homology Domain SYN_00145 SM00450 Rhodanese Homology Domain SYN_00152 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SYN_00163 SM00382 ATPases associated with a variety of cellular activities SYN_00166 SM00849 Metallo-beta-lactamase superfamily SYN_00166 SM01027 Beta-Casp domain SYN_00171 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SYN_00173 SM00448 cheY-homologous receiver domain SYN_00174 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYN_00174 SM00387 Histidine kinase-like ATPases SYN_00174 SM00388 His Kinase A (phosphoacceptor) domain SYN_00174 SM00448 cheY-homologous receiver domain SYN_00175 SM00849 Metallo-beta-lactamase superfamily SYN_00178 SM00487 DEAD-like helicases superfamily SYN_00178 SM00490 helicase superfamily c-terminal domain SYN_00180 SM00244 prohibitin homologues SYN_00183 SM00841 Elongation factor P, C-terminal SYN_00183 SM01185 SYN_00183 SYN_00190 SM00028 Tetratricopeptide repeats SYN_00192 SM00028 Tetratricopeptide repeats SYN_00194 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SYN_00194 SM00245 tail specific protease SYN_00204 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain SYN_00204 SM01232 SYN_00204 SYN_00209 SM00382 ATPases associated with a variety of cellular activities SYN_00212 SM00729 Elongator protein 3, MiaB family, Radical SAM SYN_00212 SM00876 Biotin and Thiamin Synthesis associated domain SYN_00216 SM00382 ATPases associated with a variety of cellular activities SYN_00226 SM00387 Histidine kinase-like ATPases SYN_00226 SM00388 His Kinase A (phosphoacceptor) domain SYN_00226 SM00448 cheY-homologous receiver domain SYN_00230 SM00331 Sigma factor PP2C-like phosphatases SYN_00230 SM00448 cheY-homologous receiver domain SYN_00234 SM00859 Semialdehyde dehydrogenase, NAD binding domain SYN_00241 SM00382 ATPases associated with a variety of cellular activities SYN_00242 SM00382 ATPases associated with a variety of cellular activities SYN_00248 SM00100 Cyclic nucleotide-monophosphate binding domain SYN_00248 SM00419 helix_turn_helix, cAMP Regulatory protein SYN_00261 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain SYN_00266 SM00852 Probable molybdopterin binding domain SYN_00267 SM00852 Probable molybdopterin binding domain SYN_00271 SM00382 ATPases associated with a variety of cellular activities SYN_00272 SM00852 Probable molybdopterin binding domain SYN_00283 SM00382 ATPases associated with a variety of cellular activities SYN_00286 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SYN_00286 SM00481 DNA polymerase alpha chain like domain SYN_00286 SM00483 DNA polymerase X family SYN_00287 SM00478 endonuclease III SYN_00295 SM00642 Alpha-amylase domain SYN_00309 SM00845 GatB domain SYN_00318 SM00849 Metallo-beta-lactamase superfamily SYN_00320 SM00849 Metallo-beta-lactamase superfamily SYN_00323 SM00116 Domain in cystathionine beta-synthase and other proteins. SYN_00329 SM00382 ATPases associated with a variety of cellular activities SYN_00341 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SYN_00342 SM00347 helix_turn_helix multiple antibiotic resistance protein SYN_00347 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SYN_00367 SM00382 ATPases associated with a variety of cellular activities SYN_00381 SM00729 Elongator protein 3, MiaB family, Radical SAM SYN_00383 SM00487 DEAD-like helicases superfamily SYN_00383 SM00490 helicase superfamily c-terminal domain SYN_00397 SM00382 ATPases associated with a variety of cellular activities SYN_00405 SM00834 Putative regulatory protein SYN_00410 SM00382 ATPases associated with a variety of cellular activities SYN_00416 SM00996 S-adenosyl-L-homocysteine hydrolase SYN_00416 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain SYN_00421 SM00650 Ribosomal RNA adenine dimethylases SYN_00426 SM00998 Adenylosuccinate lyase C-terminus SYN_00427 SM00487 DEAD-like helicases superfamily SYN_00427 SM00490 helicase superfamily c-terminal domain SYN_00427 SM01142 SYN_00427 SYN_00430 SM00448 cheY-homologous receiver domain SYN_00431 SM00073 Histidine Phosphotransfer domain SYN_00431 SM00260 Two component signalling adaptor domain SYN_00431 SM00387 Histidine kinase-like ATPases SYN_00431 SM00448 cheY-homologous receiver domain SYN_00432 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SYN_00432 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SYN_00433 SM00260 Two component signalling adaptor domain SYN_00434 SM00028 Tetratricopeptide repeats SYN_00434 SM00138 Methyltransferase, chemotaxis proteins SYN_00435 SM00260 Two component signalling adaptor domain SYN_00436 SM00729 Elongator protein 3, MiaB family, Radical SAM SYN_00437 SM00864 Tubulin/FtsZ family, GTPase domain SYN_00437 SM00865 Tubulin/FtsZ family, C-terminal domain SYN_00439 SM00876 Biotin and Thiamin Synthesis associated domain SYN_00461 SM01221 SYN_00461 SYN_00461 SM01222 SYN_00461 SYN_00465 SM00382 ATPases associated with a variety of cellular activities SYN_00465 SM00962 SRP54-type protein, GTPase domain SYN_00465 SM00963 SRP54-type protein, helical bundle domain SYN_00466 SM00382 ATPases associated with a variety of cellular activities SYN_00471 SM00116 Domain in cystathionine beta-synthase and other proteins. SYN_00474 SM01001 AIR carboxylase SYN_00483 SM00491 SYN_00483 SYN_00497 SM00487 DEAD-like helicases superfamily SYN_00509 SM00857 Resolvase, N terminal domain SYN_00511 SM00849 Metallo-beta-lactamase superfamily SYN_00513 SM00665 Cytochrome b-561 / ferric reductase transmembrane domain. SYN_00517 SM00919 Malic enzyme, NAD binding domain SYN_00517 SM01274 SYN_00517 SYN_00522 SM01211 SYN_00522 SYN_00525 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SYN_00527 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SYN_00532 SM00984 UDP binding domain SYN_00533 SM00116 Domain in cystathionine beta-synthase and other proteins. SYN_00538 SM00729 Elongator protein 3, MiaB family, Radical SAM SYN_00544 SM00382 ATPases associated with a variety of cellular activities SYN_00566 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYN_00566 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYN_00566 SM00091 PAS domain SYN_00568 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYN_00568 SM00091 PAS domain SYN_00568 SM00387 Histidine kinase-like ATPases SYN_00568 SM00388 His Kinase A (phosphoacceptor) domain SYN_00568 SM00448 cheY-homologous receiver domain SYN_00569 SM00382 ATPases associated with a variety of cellular activities SYN_00574 SM00100 Cyclic nucleotide-monophosphate binding domain SYN_00574 SM00419 helix_turn_helix, cAMP Regulatory protein SYN_00580 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. SYN_00580 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SYN_00582 SM00344 helix_turn_helix ASNC type SYN_00590 SM00382 ATPases associated with a variety of cellular activities SYN_00590 SM00448 cheY-homologous receiver domain SYN_00602 SM00926 Molybdopterin oxidoreductase Fe4S4 domain SYN_00609 SM00487 DEAD-like helicases superfamily SYN_00609 SM00490 helicase superfamily c-terminal domain SYN_00610 SM00382 ATPases associated with a variety of cellular activities SYN_00619 SM00481 DNA polymerase alpha chain like domain SYN_00630 SM00926 Molybdopterin oxidoreductase Fe4S4 domain SYN_00630 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SYN_00631 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SYN_00635 SM00926 Molybdopterin oxidoreductase Fe4S4 domain SYN_00647 SM00881 CoA binding domain SYN_00652 SM00347 helix_turn_helix multiple antibiotic resistance protein SYN_00677 SM00028 Tetratricopeptide repeats SYN_00687 SM00642 Alpha-amylase domain SYN_00705 SM00100 Cyclic nucleotide-monophosphate binding domain SYN_00705 SM00419 helix_turn_helix, cAMP Regulatory protein SYN_00710 SM00903 Flavin reductase like domain SYN_00715 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYN_00715 SM00091 PAS domain SYN_00715 SM00421 helix_turn_helix, Lux Regulon SYN_00725 SM00271 DnaJ molecular chaperone homology domain SYN_00730 SM00363 S4 RNA-binding domain SYN_00741 SM00460 Transglutaminase/protease-like homologues SYN_00745 SM00382 ATPases associated with a variety of cellular activities SYN_00748 SM00881 CoA binding domain SYN_00752 SM01103 SYN_00752 SYN_00758 SM00400 zinc finger SYN_00758 SM00493 SYN_00758 SYN_00774 SM00382 ATPases associated with a variety of cellular activities SYN_00775 SM00421 helix_turn_helix, Lux Regulon SYN_00775 SM00448 cheY-homologous receiver domain SYN_00776 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYN_00776 SM00091 PAS domain SYN_00776 SM00387 Histidine kinase-like ATPases SYN_00778 SM00382 ATPases associated with a variety of cellular activities SYN_00783 SM00382 ATPases associated with a variety of cellular activities SYN_00783 SM00464 Found in ATP-dependent protease La (LON) SYN_00785 SM00382 ATPases associated with a variety of cellular activities SYN_00786 SM00382 ATPases associated with a variety of cellular activities SYN_00794 SM00155 Phospholipase D. Active site motifs. SYN_00795 SM00729 Elongator protein 3, MiaB family, Radical SAM SYN_00796 SM00358 Double-stranded RNA binding motif SYN_00796 SM00535 Ribonuclease III family SYN_00797 SM00729 Elongator protein 3, MiaB family, Radical SAM SYN_00800 SM00930 SYN_00800 SYN_00812 SM01264 SYN_00812 SYN_00824 SM00382 ATPases associated with a variety of cellular activities SYN_00833 SM00460 Transglutaminase/protease-like homologues SYN_00839 SM00382 ATPases associated with a variety of cellular activities SYN_00845 SM00191 Integrin alpha (beta-propellor repeats). SYN_00853 SM00382 ATPases associated with a variety of cellular activities SYN_00855 SM00028 Tetratricopeptide repeats SYN_00857 SM00567 E-Z type HEAT repeats SYN_00872 SM00831 Cation transporter/ATPase, N-terminus SYN_00875 SM00421 helix_turn_helix, Lux Regulon SYN_00875 SM00448 cheY-homologous receiver domain SYN_00882 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYN_00882 SM00091 PAS domain SYN_00882 SM00387 Histidine kinase-like ATPases SYN_00882 SM00388 His Kinase A (phosphoacceptor) domain SYN_00893 SM00028 Tetratricopeptide repeats SYN_00894 SM00271 DnaJ molecular chaperone homology domain SYN_00896 SM00481 DNA polymerase alpha chain like domain SYN_00897 SM00116 Domain in cystathionine beta-synthase and other proteins. SYN_00897 SM01240 SYN_00897 SYN_00903 SM00646 SYN_00903 SYN_00904 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SYN_00904 SM00954 Region found in RelA / SpoT proteins SYN_00911 SM00859 Semialdehyde dehydrogenase, NAD binding domain SYN_00915 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SYN_00922 SM00382 ATPases associated with a variety of cellular activities SYN_00929 SM00387 Histidine kinase-like ATPases SYN_00929 SM00448 cheY-homologous receiver domain SYN_00939 SM00838 Elongation factor G C-terminus SYN_00946 SM00382 ATPases associated with a variety of cellular activities SYN_00951 SM00028 Tetratricopeptide repeats SYN_00955 SM00382 ATPases associated with a variety of cellular activities SYN_00962 SM00448 cheY-homologous receiver domain SYN_00963 SM00073 Histidine Phosphotransfer domain SYN_00963 SM00260 Two component signalling adaptor domain SYN_00963 SM00387 Histidine kinase-like ATPases SYN_00963 SM01231 SYN_00963 SYN_00964 SM00448 cheY-homologous receiver domain SYN_00967 SM00448 cheY-homologous receiver domain SYN_00968 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SYN_00970 SM00138 Methyltransferase, chemotaxis proteins SYN_00971 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SYN_00973 SM00382 ATPases associated with a variety of cellular activities SYN_00973 SM00448 cheY-homologous receiver domain SYN_00974 SM00448 cheY-homologous receiver domain SYN_00975 SM00260 Two component signalling adaptor domain SYN_00977 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SYN_00979 SM01002 Alanine dehydrogenase/PNT, C-terminal domain SYN_00979 SM01003 Alanine dehydrogenase/PNT, N-terminal domain SYN_00981 SM00448 cheY-homologous receiver domain SYN_00981 SM00862 Transcriptional regulatory protein, C terminal SYN_00982 SM00382 ATPases associated with a variety of cellular activities SYN_00984 SM01403 SYN_00984 SYN_00988 SM01382 SYN_00988 SYN_00988 SM01383 SYN_00988 SYN_00991 SM00322 K homology RNA-binding domain SYN_00994 SM00836 DALR anticodon binding domain SYN_00994 SM01016 Arginyl tRNA synthetase N terminal dom SYN_00996 SM00382 ATPases associated with a variety of cellular activities SYN_00996 SM00962 SRP54-type protein, GTPase domain SYN_00996 SM00963 SRP54-type protein, helical bundle domain SYN_00997 SM01058 CarD-like/TRCF domain SYN_00998 SM00729 Elongator protein 3, MiaB family, Radical SAM SYN_00999 SM00257 Lysin motif SYN_01003 SM00506 Appr-1"-p processing enzyme SYN_01009 SM00831 Cation transporter/ATPase, N-terminus SYN_01013 SM01234 SYN_01013 SYN_01015 SM00393 Putative single-stranded nucleic acids-binding domain SYN_01015 SM01245 SYN_01015 SYN_01019 SM00421 helix_turn_helix, Lux Regulon SYN_01019 SM00448 cheY-homologous receiver domain SYN_01028 SM00421 helix_turn_helix, Lux Regulon SYN_01029 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase SYN_01036 SM00957 SecA DEAD-like domain SYN_01036 SM00958 SecA preprotein cross-linking domain SYN_01037 SM00382 ATPases associated with a variety of cellular activities SYN_01041 SM00878 Biotin carboxylase C-terminal domain SYN_01054 SM00382 ATPases associated with a variety of cellular activities SYN_01066 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SYN_01068 SM00978 SYN_01068 SYN_01075 SM00028 Tetratricopeptide repeats SYN_01077 SM00091 PAS domain SYN_01077 SM00387 Histidine kinase-like ATPases SYN_01077 SM00388 His Kinase A (phosphoacceptor) domain SYN_01077 SM00448 cheY-homologous receiver domain SYN_01078 SM00448 cheY-homologous receiver domain SYN_01079 SM00267 diguanylate cyclase SYN_01079 SM00388 His Kinase A (phosphoacceptor) domain SYN_01079 SM00448 cheY-homologous receiver domain SYN_01090 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYN_01090 SM00091 PAS domain SYN_01090 SM00382 ATPases associated with a variety of cellular activities SYN_01093 SM00382 ATPases associated with a variety of cellular activities SYN_01093 SM00448 cheY-homologous receiver domain SYN_01094 SM00387 Histidine kinase-like ATPases SYN_01094 SM00388 His Kinase A (phosphoacceptor) domain SYN_01095 SM00028 Tetratricopeptide repeats SYN_01105 SM00710 Parallel beta-helix repeats SYN_01113 SM00984 UDP binding domain SYN_01122 SM00091 PAS domain SYN_01122 SM00382 ATPases associated with a variety of cellular activities SYN_01124 SM00984 UDP binding domain SYN_01126 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins SYN_01127 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins SYN_01158 SM00849 Metallo-beta-lactamase superfamily SYN_01159 SM00829 Enoylreductase SYN_01174 SM00834 Putative regulatory protein SYN_01177 SM00849 Metallo-beta-lactamase superfamily SYN_01181 SM00091 PAS domain SYN_01181 SM00382 ATPases associated with a variety of cellular activities SYN_01191 SM00091 PAS domain SYN_01191 SM00382 ATPases associated with a variety of cellular activities SYN_01208 SM00116 Domain in cystathionine beta-synthase and other proteins. SYN_01208 SM01091 Transporter associated domain SYN_01222 SM00091 PAS domain SYN_01228 SM00411 bacterial (prokaryotic) histone like domain SYN_01234 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYN_01234 SM00091 PAS domain SYN_01234 SM00448 cheY-homologous receiver domain SYN_01234 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SYN_01236 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SYN_01236 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SYN_01241 SM00116 Domain in cystathionine beta-synthase and other proteins. SYN_01242 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SYN_01263 SM00267 diguanylate cyclase SYN_01263 SM00382 ATPases associated with a variety of cellular activities SYN_01273 SM00729 Elongator protein 3, MiaB family, Radical SAM SYN_01274 SM00382 ATPases associated with a variety of cellular activities SYN_01274 SM00843 SYN_01274 SYN_01275 SM00563 Phosphate acyltransferases SYN_01279 SM00072 Guanylate kinase homologues. SYN_01280 SM01409 SYN_01280 SYN_01281 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SYN_01282 SM00967 RNA 2'-O ribose methyltransferase substrate binding SYN_01287 SM00450 Rhodanese Homology Domain SYN_01287 SM00849 Metallo-beta-lactamase superfamily SYN_01291 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYN_01291 SM00091 PAS domain SYN_01291 SM00388 His Kinase A (phosphoacceptor) domain SYN_01291 SM00897 FIST N domain SYN_01291 SM01204 SYN_01291 SYN_01292 SM00448 cheY-homologous receiver domain SYN_01297 SM00357 Cold shock protein domain SYN_01298 SM00487 DEAD-like helicases superfamily SYN_01298 SM00490 helicase superfamily c-terminal domain SYN_01299 SM00830 Chorismate mutase type II SYN_01301 SM00028 Tetratricopeptide repeats SYN_01324 SM00267 diguanylate cyclase SYN_01336 SM00487 DEAD-like helicases superfamily SYN_01336 SM00490 helicase superfamily c-terminal domain SYN_01348 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SYN_01348 SM00465 GIY-YIG type nucleases (URI domain) SYN_01350 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase SYN_01355 SM00729 Elongator protein 3, MiaB family, Radical SAM SYN_01363 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain SYN_01363 SM00448 cheY-homologous receiver domain SYN_01364 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYN_01364 SM00387 Histidine kinase-like ATPases SYN_01364 SM00388 His Kinase A (phosphoacceptor) domain SYN_01369 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SYN_01370 SM00902 Iron hydrogenase small subunit SYN_01370 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SYN_01373 SM00448 cheY-homologous receiver domain SYN_01374 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYN_01374 SM00091 PAS domain SYN_01374 SM00387 Histidine kinase-like ATPases SYN_01377 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain SYN_01402 SM00670 Large family of predicted nucleotide-binding domains SYN_01404 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYN_01404 SM00382 ATPases associated with a variety of cellular activities SYN_01405 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SYN_01405 SM00534 ATPase domain of DNA mismatch repair MUTS family SYN_01408 SM00257 Lysin motif SYN_01410 SM01329 SYN_01410 SYN_01414 SM00028 Tetratricopeptide repeats SYN_01415 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SYN_01418 SM00257 Lysin motif SYN_01426 SM00382 ATPases associated with a variety of cellular activities SYN_01428 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain SYN_01428 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SYN_01430 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYN_01430 SM00091 PAS domain SYN_01430 SM00421 helix_turn_helix, Lux Regulon SYN_01437 SM00357 Cold shock protein domain SYN_01438 SM00091 PAS domain SYN_01438 SM00387 Histidine kinase-like ATPases SYN_01438 SM00448 cheY-homologous receiver domain SYN_01444 SM00967 RNA 2'-O ribose methyltransferase substrate binding SYN_01447 SM00861 Transketolase, pyrimidine binding domain SYN_01459 SM00382 ATPases associated with a variety of cellular activities SYN_01460 SM00382 ATPases associated with a variety of cellular activities SYN_01464 SM00028 Tetratricopeptide repeats SYN_01465 SM00091 PAS domain SYN_01465 SM00387 Histidine kinase-like ATPases SYN_01465 SM00388 His Kinase A (phosphoacceptor) domain SYN_01466 SM00382 ATPases associated with a variety of cellular activities SYN_01466 SM00448 cheY-homologous receiver domain SYN_01473 SM00382 ATPases associated with a variety of cellular activities SYN_01476 SM00421 helix_turn_helix, Lux Regulon SYN_01481 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain SYN_01481 SM01080 SYN_01481 SYN_01482 SM01005 Alanine racemase, C-terminal domain SYN_01491 SM00858 SYN_01491 SYN_01497 SM00382 ATPases associated with a variety of cellular activities SYN_01500 SM00028 Tetratricopeptide repeats SYN_01501 SM00028 Tetratricopeptide repeats SYN_01505 SM00327 von Willebrand factor (vWF) type A domain SYN_01506 SM00382 ATPases associated with a variety of cellular activities SYN_01508 SM00530 Helix-turn-helix XRE-family like proteins SYN_01511 SM00382 ATPases associated with a variety of cellular activities SYN_01515 SM00382 ATPases associated with a variety of cellular activities SYN_01522 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain SYN_01523 SM01323 SYN_01523 SYN_01529 SM00116 Domain in cystathionine beta-synthase and other proteins. SYN_01529 SM00924 MgtE intracellular N domain SYN_01534 SM00116 Domain in cystathionine beta-synthase and other proteins. SYN_01534 SM00924 MgtE intracellular N domain SYN_01549 SM00382 ATPases associated with a variety of cellular activities SYN_01564 SM00382 ATPases associated with a variety of cellular activities SYN_01569 SM00935 Outer membrane protein (OmpH-like) SYN_01574 SM00838 Elongation factor G C-terminus SYN_01574 SM00889 Elongation factor G, domain IV SYN_01575 SM00954 Region found in RelA / SpoT proteins SYN_01597 SM00316 Ribosomal protein S1-like RNA-binding domain SYN_01600 SM00363 S4 RNA-binding domain SYN_01600 SM01390 SYN_01600 SYN_01601 SM00662 RNA polymerases D SYN_01605 SM00849 Metallo-beta-lactamase superfamily SYN_01613 SM01230 SYN_01613 SYN_01625 SM00851 MGS-like domain SYN_01625 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SYN_01627 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain SYN_01628 SM01230 SYN_01628 SYN_01633 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYN_01633 SM00382 ATPases associated with a variety of cellular activities SYN_01635 SM00382 ATPases associated with a variety of cellular activities SYN_01635 SM00448 cheY-homologous receiver domain SYN_01636 SM00091 PAS domain SYN_01636 SM00387 Histidine kinase-like ATPases SYN_01636 SM00388 His Kinase A (phosphoacceptor) domain SYN_01640 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain SYN_01648 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SYN_01650 SM01228 SYN_01650 SYN_01651 SM00729 Elongator protein 3, MiaB family, Radical SAM SYN_01662 SM00900 SYN_01662 SYN_01666 SM00382 ATPases associated with a variety of cellular activities SYN_01672 SM00926 Molybdopterin oxidoreductase Fe4S4 domain SYN_01692 SM00563 Phosphate acyltransferases SYN_01694 SM00825 Beta-ketoacyl synthase SYN_01700 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. SYN_01701 SM00387 Histidine kinase-like ATPases SYN_01701 SM00388 His Kinase A (phosphoacceptor) domain SYN_01702 SM00382 ATPases associated with a variety of cellular activities SYN_01702 SM00448 cheY-homologous receiver domain SYN_01706 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SYN_01717 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SYN_01723 SM00873 B3/4 domain SYN_01723 SM00874 tRNA synthetase B5 domain SYN_01723 SM00896 Ferredoxin-fold anticodon binding domain SYN_01724 SM00411 bacterial (prokaryotic) histone like domain SYN_01725 SM00422 helix_turn_helix, mercury resistance SYN_01733 SM01192 SYN_01733 SYN_01733 SM01193 SYN_01733 SYN_01734 SM00732 Likely ribonuclease with RNase H fold. SYN_01772 SM00965 Secretin and TonB N terminus short domain SYN_01780 SM00316 Ribosomal protein S1-like RNA-binding domain SYN_01780 SM00322 K homology RNA-binding domain SYN_01782 SM01387 SYN_01782 SYN_01789 SM00316 Ribosomal protein S1-like RNA-binding domain SYN_01789 SM00322 K homology RNA-binding domain SYN_01795 SM00937 SYN_01795 SYN_01798 SM00357 Cold shock protein domain SYN_01798 SM00382 ATPases associated with a variety of cellular activities SYN_01798 SM00959 Rho termination factor, N-terminal domain SYN_01800 SM00363 S4 RNA-binding domain SYN_01802 SM00729 Elongator protein 3, MiaB family, Radical SAM SYN_01808 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SYN_01808 SM00387 Histidine kinase-like ATPases SYN_01808 SM00388 His Kinase A (phosphoacceptor) domain SYN_01809 SM00382 ATPases associated with a variety of cellular activities SYN_01809 SM00448 cheY-homologous receiver domain SYN_01810 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SYN_01827 SM00487 DEAD-like helicases superfamily SYN_01827 SM00490 helicase superfamily c-terminal domain SYN_01844 SM00382 ATPases associated with a variety of cellular activities SYN_01845 SM00933 SYN_01845 SYN_01852 SM00487 DEAD-like helicases superfamily SYN_01852 SM00490 helicase superfamily c-terminal domain SYN_01854 SM00487 DEAD-like helicases superfamily SYN_01854 SM00490 helicase superfamily c-terminal domain SYN_01867 SM00289 Worm-specific repeat type 1 SYN_01881 SM00530 Helix-turn-helix XRE-family like proteins SYN_01888 SM00382 ATPases associated with a variety of cellular activities SYN_01899 SM00382 ATPases associated with a variety of cellular activities SYN_01901 SM00954 Region found in RelA / SpoT proteins SYN_01904 SM00382 ATPases associated with a variety of cellular activities SYN_01906 SM00271 DnaJ molecular chaperone homology domain SYN_01908 SM00883 Chaperonin 10 Kd subunit SYN_01917 SM00909 Sporulation and spore germination SYN_01918 SM00838 Elongation factor G C-terminus SYN_01918 SM00889 Elongation factor G, domain IV SYN_01919 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYN_01929 SM00487 DEAD-like helicases superfamily SYN_01929 SM00490 helicase superfamily c-terminal domain SYN_01938 SM00830 Chorismate mutase type II SYN_01948 SM00904 Riboflavin kinase SYN_01949 SM00881 CoA binding domain SYN_01953 SM00421 helix_turn_helix, Lux Regulon SYN_01953 SM00448 cheY-homologous receiver domain SYN_01954 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYN_01954 SM00091 PAS domain SYN_01954 SM00387 Histidine kinase-like ATPases SYN_01959 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SYN_01960 SM00729 Elongator protein 3, MiaB family, Radical SAM SYN_01978 SM00382 ATPases associated with a variety of cellular activities SYN_01990 SM00382 ATPases associated with a variety of cellular activities SYN_01994 SM00382 ATPases associated with a variety of cellular activities SYN_02005 SM00267 diguanylate cyclase SYN_02019 SM00411 bacterial (prokaryotic) histone like domain SYN_02023 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SYN_02024 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SYN_02024 SM00245 tail specific protease SYN_02026 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SYN_02028 SM00382 ATPases associated with a variety of cellular activities SYN_02030 SM00852 Probable molybdopterin binding domain SYN_02036 SM00327 von Willebrand factor (vWF) type A domain SYN_02036 SM00609 Vault protein Inter-alpha-Trypsin domain SYN_02048 SM00434 DNA Topoisomerase IV SYN_02049 SM00387 Histidine kinase-like ATPases SYN_02049 SM00433 TopoisomeraseII SYN_02050 SM00480 DNA polymerase III beta subunit SYN_02051 SM00382 ATPases associated with a variety of cellular activities SYN_02051 SM00760 Bacterial dnaA protein helix-turn-helix domain SYN_02065 SM00382 ATPases associated with a variety of cellular activities SYN_02069 SM00382 ATPases associated with a variety of cellular activities SYN_02071 SM00487 DEAD-like helicases superfamily SYN_02071 SM00490 helicase superfamily c-terminal domain SYN_02088 SM00478 endonuclease III SYN_02092 SM00267 diguanylate cyclase SYN_02092 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SYN_02112 SM00881 CoA binding domain SYN_02123 SM00903 Flavin reductase like domain SYN_02127 SM00822 SYN_02127 SYN_02133 SM00729 Elongator protein 3, MiaB family, Radical SAM SYN_02133 SM00876 Biotin and Thiamin Synthesis associated domain SYN_02134 SM00729 Elongator protein 3, MiaB family, Radical SAM SYN_02134 SM00876 Biotin and Thiamin Synthesis associated domain SYN_02137 SM00926 Molybdopterin oxidoreductase Fe4S4 domain SYN_02137 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SYN_02139 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SYN_02143 SM00849 Metallo-beta-lactamase superfamily SYN_02145 SM00257 Lysin motif SYN_02145 SM00646 SYN_02145 SYN_02148 SM00852 Probable molybdopterin binding domain SYN_02149 SM00729 Elongator protein 3, MiaB family, Radical SAM SYN_02153 SM00382 ATPases associated with a variety of cellular activities SYN_02153 SM01086 C-terminal, D2-small domain, of ClpB protein SYN_02161 SM01130 SYN_02161 SYN_02164 SM00746 metallochaperone-like domain SYN_02171 SM00382 ATPases associated with a variety of cellular activities SYN_02172 SM00382 ATPases associated with a variety of cellular activities SYN_02175 SM00357 Cold shock protein domain SYN_02176 SM00729 Elongator protein 3, MiaB family, Radical SAM SYN_02178 SM00986 Uracil DNA glycosylase superfamily SYN_02178 SM00987 UreE urease accessory protein, C-terminal domain SYN_02180 SM00244 prohibitin homologues SYN_02186 SM00729 Elongator protein 3, MiaB family, Radical SAM SYN_02192 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SYN_02194 SM00917 LeuA allosteric (dimerisation) domain SYN_02196 SM00316 Ribosomal protein S1-like RNA-binding domain SYN_02201 SM00890 Domain of unknown function SYN_02208 SM00899 SYN_02208 SYN_02212 SM00938 Nitrogen regulatory protein P-II SYN_02213 SM00091 PAS domain SYN_02213 SM00387 Histidine kinase-like ATPases SYN_02213 SM00388 His Kinase A (phosphoacceptor) domain SYN_02213 SM00448 cheY-homologous receiver domain SYN_02214 SM00382 ATPases associated with a variety of cellular activities SYN_02214 SM00448 cheY-homologous receiver domain SYN_02215 SM00387 Histidine kinase-like ATPases SYN_02215 SM00388 His Kinase A (phosphoacceptor) domain SYN_02218 SM00831 Cation transporter/ATPase, N-terminus SYN_02224 SM00382 ATPases associated with a variety of cellular activities SYN_02231 SM00854 Bacterial capsule synthesis protein PGA_cap SYN_02257 SM00642 Alpha-amylase domain SYN_02258 SM00448 cheY-homologous receiver domain SYN_02261 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs SYN_02261 SM00474 3'-5' exonuclease SYN_02261 SM00475 5'-3' exonuclease SYN_02261 SM00482 DNA polymerase A domain SYN_02265 SM00344 helix_turn_helix ASNC type SYN_02266 SM00729 Elongator protein 3, MiaB family, Radical SAM SYN_02267 SM01004 Delta-aminolevulinic acid dehydratase SYN_02268 SM00729 Elongator protein 3, MiaB family, Radical SAM SYN_02339 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYN_02339 SM00091 PAS domain SYN_02339 SM00421 helix_turn_helix, Lux Regulon SYN_02347 SM01117 SYN_02347 SYN_02351 SM00746 metallochaperone-like domain SYN_02354 SM00014 Acid phosphatase homologues SYN_02359 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SYN_02359 SM00331 Sigma factor PP2C-like phosphatases SYN_02361 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SYN_02361 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SYN_02365 SM00825 Beta-ketoacyl synthase SYN_02378 SM00382 ATPases associated with a variety of cellular activities SYN_02378 SM01086 C-terminal, D2-small domain, of ClpB protein SYN_02380 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYN_02380 SM00387 Histidine kinase-like ATPases SYN_02380 SM00448 cheY-homologous receiver domain SYN_02382 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SYN_02396 SM01060 SYN_02396 SYN_02414 SM00131 BPTI/Kunitz family of serine protease inhibitors. SYN_02419 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain SYN_02426 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SYN_02430 SM00487 DEAD-like helicases superfamily SYN_02430 SM00490 helicase superfamily c-terminal domain SYN_02432 SM00357 Cold shock protein domain SYN_02439 SM01209 SYN_02439 SYN_02439 SM01210 SYN_02439 SYN_02440 SM00798 AICARFT/IMPCHase bienzyme SYN_02440 SM00851 MGS-like domain SYN_02442 SM01001 AIR carboxylase SYN_02455 SM00363 S4 RNA-binding domain SYN_02456 SM00861 Transketolase, pyrimidine binding domain SYN_02478 SM00487 DEAD-like helicases superfamily SYN_02478 SM00490 helicase superfamily c-terminal domain SYN_02482 SM00463 Small MutS-related domain SYN_02485 SM00831 Cation transporter/ATPase, N-terminus SYN_02488 SM00357 Cold shock protein domain SYN_02502 SM00881 CoA binding domain SYN_02504 SM00925 MltA specific insert domain SYN_02506 SM00769 Water Stress and Hypersensitive response SYN_02510 SM00331 Sigma factor PP2C-like phosphatases SYN_02511 SM00729 Elongator protein 3, MiaB family, Radical SAM SYN_02520 SM00881 CoA binding domain SYN_02525 SM00382 ATPases associated with a variety of cellular activities SYN_02525 SM01086 C-terminal, D2-small domain, of ClpB protein SYN_02530 SM00382 ATPases associated with a variety of cellular activities SYN_02530 SM00448 cheY-homologous receiver domain SYN_02531 SM00091 PAS domain SYN_02531 SM00387 Histidine kinase-like ATPases SYN_02531 SM00388 His Kinase A (phosphoacceptor) domain SYN_02533 SM00849 Metallo-beta-lactamase superfamily SYN_02543 SM00091 PAS domain SYN_02543 SM00267 diguanylate cyclase SYN_02546 SM00869 Autotransporter beta-domain SYN_02551 SM00382 ATPases associated with a variety of cellular activities SYN_02566 SM00825 Beta-ketoacyl synthase SYN_02570 SM00267 diguanylate cyclase SYN_02572 SM00382 ATPases associated with a variety of cellular activities SYN_02576 SM00091 PAS domain SYN_02576 SM00387 Histidine kinase-like ATPases SYN_02576 SM00388 His Kinase A (phosphoacceptor) domain SYN_02576 SM00448 cheY-homologous receiver domain SYN_02581 SM00387 Histidine kinase-like ATPases SYN_02584 SM00341 Helicase and RNase D C-terminal SYN_02584 SM00487 DEAD-like helicases superfamily SYN_02584 SM00490 helicase superfamily c-terminal domain SYN_02584 SM00956 SYN_02584 SYN_02585 SM00382 ATPases associated with a variety of cellular activities SYN_02588 SM00421 helix_turn_helix, Lux Regulon SYN_02588 SM00448 cheY-homologous receiver domain SYN_02589 SM00851 MGS-like domain SYN_02589 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SYN_02593 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYN_02593 SM00091 PAS domain SYN_02593 SM00421 helix_turn_helix, Lux Regulon SYN_02597 SM00882 Coenzyme A transferase SYN_02604 SM00845 GatB domain SYN_02607 SM00881 CoA binding domain SYN_02609 SM00881 CoA binding domain SYN_02619 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain SYN_02624 SM00347 helix_turn_helix multiple antibiotic resistance protein SYN_02630 SM00642 Alpha-amylase domain SYN_02636 SM00893 Electron transfer flavoprotein domain SYN_02637 SM00893 Electron transfer flavoprotein domain SYN_02656 SM00382 ATPases associated with a variety of cellular activities SYN_02675 SM00984 UDP binding domain SYN_02682 SM00829 Enoylreductase SYN_02700 SM00474 3'-5' exonuclease SYN_02703 SM01018 B12 binding domain SYN_02709 SM00849 Metallo-beta-lactamase superfamily SYN_02711 SM00271 DnaJ molecular chaperone homology domain SYN_02713 SM00382 ATPases associated with a variety of cellular activities SYN_02713 SM00448 cheY-homologous receiver domain SYN_02714 SM00091 PAS domain SYN_02714 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SYN_02714 SM00387 Histidine kinase-like ATPases SYN_02714 SM00388 His Kinase A (phosphoacceptor) domain SYN_02721 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SYN_02721 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SYN_02722 SM00091 PAS domain SYN_02722 SM00267 diguanylate cyclase SYN_02733 SM00530 Helix-turn-helix XRE-family like proteins SYN_02736 SM00530 Helix-turn-helix XRE-family like proteins SYN_02759 SM00487 DEAD-like helicases superfamily SYN_02759 SM00490 helicase superfamily c-terminal domain SYN_02759 SM00982 SYN_02759 SYN_02759 SM01058 CarD-like/TRCF domain SYN_02760 SM00831 Cation transporter/ATPase, N-terminus SYN_02764 SM00903 Flavin reductase like domain SYN_02767 SM01400 SYN_02767 SYN_02776 SM00977 TilS substrate C-terminal domain SYN_02777 SM00382 ATPases associated with a variety of cellular activities SYN_02782 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SYN_02786 SM00382 ATPases associated with a variety of cellular activities SYN_02786 SM00994 ClpX C4-type zinc finger SYN_02786 SM01086 C-terminal, D2-small domain, of ClpB protein SYN_02787 SM00382 ATPases associated with a variety of cellular activities SYN_02787 SM00464 Found in ATP-dependent protease La (LON) SYN_02788 SM00729 Elongator protein 3, MiaB family, Radical SAM SYN_02790 SM00937 SYN_02790 SYN_02791 SM00257 Lysin motif SYN_02793 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SYN_02797 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SYN_02798 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain SYN_02798 SM00437 Bacterial DNA topoisomerase I DNA-binding domain SYN_02798 SM00493 SYN_02798 SYN_02801 SM00448 cheY-homologous receiver domain SYN_02801 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SYN_02802 SM00028 Tetratricopeptide repeats SYN_02803 SM00028 Tetratricopeptide repeats SYN_02818 SM00858 SYN_02818 SYN_02829 SM00382 ATPases associated with a variety of cellular activities SYN_02829 SM00962 SRP54-type protein, GTPase domain SYN_02849 SM00028 Tetratricopeptide repeats SYN_02851 SM00849 Metallo-beta-lactamase superfamily SYN_02852 SM00382 ATPases associated with a variety of cellular activities SYN_02852 SM00487 DEAD-like helicases superfamily SYN_02852 SM00490 helicase superfamily c-terminal domain SYN_02852 SM00847 Helicase associated domain (HA2) Add an annotation SYN_02856 SM00363 S4 RNA-binding domain SYN_02859 SM00411 bacterial (prokaryotic) histone like domain SYN_02860 SM00925 MltA specific insert domain SYN_02878 SM00881 CoA binding domain SYN_02889 SM00853 MutL C terminal dimerisation domain SYN_02889 SM01340 SYN_02889 SYN_02891 SM00710 Parallel beta-helix repeats SYN_02892 SM00849 Metallo-beta-lactamase superfamily SYN_02894 SM00060 Fibronectin type 3 domain SYN_02895 SM00028 Tetratricopeptide repeats SYN_02899 SM00091 PAS domain SYN_02899 SM00382 ATPases associated with a variety of cellular activities SYN_02916 SM00981 SYN_02916 SYN_02927 SM00248 ankyrin repeats SYN_02930 SM00838 Elongation factor G C-terminus SYN_02930 SM00889 Elongation factor G, domain IV SYN_02931 SM00852 Probable molybdopterin binding domain SYN_02935 SM00292 breast cancer carboxy-terminal domain SYN_02935 SM00532 Ligase N family SYN_02956 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) SYN_02956 SM00382 ATPases associated with a variety of cellular activities SYN_02971 SM00382 ATPases associated with a variety of cellular activities SYN_02972 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SYN_02979 SM00322 K homology RNA-binding domain SYN_02979 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SYN_03003 SM00749 bacterial OsmY and nodulation domain SYN_03026 SM00840 SYN_03026 SYN_03032 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain SYN_03037 SM00091 PAS domain SYN_03127 SM00842 Cell division protein FtsA SYN_03153 SM00382 ATPases associated with a variety of cellular activities SYN_03192 SM00481 DNA polymerase alpha chain like domain SYN_03195 SM00028 Tetratricopeptide repeats SYN_03197 SM00316 Ribosomal protein S1-like RNA-binding domain SYN_03200 SM00411 bacterial (prokaryotic) histone like domain SYN_03206 SM00382 ATPases associated with a variety of cellular activities SYN_03226 SM00345 helix_turn_helix gluconate operon transcriptional repressor SYN_03226 SM00895 SYN_03226 SYN_03257 SM01374 SYN_03257 SYN_03272 SM00493 SYN_03272 SYN_03313 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SYN_03364 SM00530 Helix-turn-helix XRE-family like proteins SYN_03514 SM00248 ankyrin repeats SYN_03611 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SYN_03643 SM00382 ATPases associated with a variety of cellular activities SYN_03818 SM00450 Rhodanese Homology Domain