SYN_03352 0c6312801288f530ad359203c43600d0 135 Gene3D G3DSA:3.40.140.10 1 134 3.4E-28 T 11-10-2018 SYN_03352 0c6312801288f530ad359203c43600d0 135 SUPERFAMILY SSF53927 6 125 3.58E-22 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 SYN_03352 0c6312801288f530ad359203c43600d0 135 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 25 99 2.8E-9 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain SYN_00261 02ad839de41d7f129835e939bdc5f92a 657 Gene3D G3DSA:3.60.9.10 1 211 1.6E-82 T 11-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily SYN_00261 02ad839de41d7f129835e939bdc5f92a 657 SUPERFAMILY SSF48310 239 656 2.88E-63 T 11-10-2018 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 SYN_00261 02ad839de41d7f129835e939bdc5f92a 657 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 239 644 8.4E-51 T 11-10-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 SYN_00261 02ad839de41d7f129835e939bdc5f92a 657 SUPERFAMILY SSF56228 5 208 2.75E-64 T 11-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily SYN_00261 02ad839de41d7f129835e939bdc5f92a 657 Gene3D G3DSA:1.10.599.10 501 646 1.7E-19 T 11-10-2018 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 SYN_00261 02ad839de41d7f129835e939bdc5f92a 657 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 10 206 6.5E-67 T 11-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 SYN_00261 02ad839de41d7f129835e939bdc5f92a 657 SMART SM00790 6 207 3.0E-93 T 11-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 SYN_00261 02ad839de41d7f129835e939bdc5f92a 657 Gene3D G3DSA:1.10.569.10 250 442 4.4E-56 T 11-10-2018 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 SYN_00688 3d3a1da73373ac11f35c341e8b37d7c8 285 Pfam PF04228 Putative neutral zinc metallopeptidase 4 280 3.6E-121 T 11-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative SYN_02721 c0928bb469037d80cff77076562a9b68 484 SMART SM00304 225 277 2.2E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SYN_02721 c0928bb469037d80cff77076562a9b68 484 TIGRFAM TIGR00277 HDIG: HDIG domain 309 398 5.5E-8 T 11-10-2018 IPR006675 HDIG domain SYN_02721 c0928bb469037d80cff77076562a9b68 484 Pfam PF00672 HAMP domain 227 269 4.1E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SYN_02721 c0928bb469037d80cff77076562a9b68 484 SMART SM00471 304 439 1.7E-13 T 11-10-2018 IPR003607 HD/PDEase domain SYN_02721 c0928bb469037d80cff77076562a9b68 484 Gene3D G3DSA:1.20.1480.50 187 282 1.5E-7 T 11-10-2018 SYN_02721 c0928bb469037d80cff77076562a9b68 484 Pfam PF17203 Single cache domain 3 72 196 6.1E-9 T 11-10-2018 IPR033463 Single cache domain 3 SYN_02721 c0928bb469037d80cff77076562a9b68 484 SUPERFAMILY SSF109604 300 470 1.03E-42 T 11-10-2018 SYN_02721 c0928bb469037d80cff77076562a9b68 484 SUPERFAMILY SSF103190 71 195 8.63E-10 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily SYN_02721 c0928bb469037d80cff77076562a9b68 484 Gene3D G3DSA:1.10.3210.10 283 477 2.5E-70 T 11-10-2018 SYN_02721 c0928bb469037d80cff77076562a9b68 484 Pfam PF01966 HD domain 310 430 3.6E-21 T 11-10-2018 IPR006674 HD domain SYN_01977 cb4b6d4b6ccf16f3077d0cd9640a6e6c 156 SUPERFAMILY SSF54637 11 155 8.18E-21 T 11-10-2018 IPR029069 HotDog domain superfamily SYN_01977 cb4b6d4b6ccf16f3077d0cd9640a6e6c 156 Gene3D G3DSA:3.10.129.10 3 155 2.2E-42 T 11-10-2018 SYN_01977 cb4b6d4b6ccf16f3077d0cd9640a6e6c 156 Pfam PF03061 Thioesterase superfamily 60 146 1.7E-8 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 SYN_00029 02092e267827c4fadf9b3a6f45e6c132 168 SUPERFAMILY SSF49764 27 166 2.44E-42 T 11-10-2018 IPR008978 HSP20-like chaperone SYN_00029 02092e267827c4fadf9b3a6f45e6c132 168 Pfam PF00011 Hsp20/alpha crystallin family 64 166 5.1E-26 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain SYN_00029 02092e267827c4fadf9b3a6f45e6c132 168 Gene3D G3DSA:2.60.40.790 17 166 1.7E-42 T 11-10-2018 IPR008978 HSP20-like chaperone SYN_01795 f615c9c6e94a0aec56ac98d8e7fea9af 357 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 226 242 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SYN_01795 f615c9c6e94a0aec56ac98d8e7fea9af 357 Gene3D G3DSA:3.30.160.20 209 295 3.8E-96 T 11-10-2018 SYN_01795 f615c9c6e94a0aec56ac98d8e7fea9af 357 SUPERFAMILY SSF75620 8 351 3.53E-132 T 11-10-2018 SYN_01795 f615c9c6e94a0aec56ac98d8e7fea9af 357 Pfam PF03462 PCRF domain 9 202 2.9E-71 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 SYN_01795 f615c9c6e94a0aec56ac98d8e7fea9af 357 Pfam PF00472 RF-1 domain 209 319 1.7E-40 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SYN_01795 f615c9c6e94a0aec56ac98d8e7fea9af 357 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 2 354 1.2E-162 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 SYN_01795 f615c9c6e94a0aec56ac98d8e7fea9af 357 Gene3D G3DSA:1.20.58.410 2 98 2.0E-5 T 11-10-2018 SYN_01795 f615c9c6e94a0aec56ac98d8e7fea9af 357 Gene3D G3DSA:3.30.70.1660 109 340 3.8E-96 T 11-10-2018 SYN_01795 f615c9c6e94a0aec56ac98d8e7fea9af 357 SMART SM00937 61 177 3.4E-58 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 SYN_01795 f615c9c6e94a0aec56ac98d8e7fea9af 357 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 355 40.788 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 SYN_02895 641fca020d83a3710549244cc9a27c65 663 Pfam PF06552 Plant specific mitochondrial import receptor subunit TOM20 30 82 1.1E-5 T 11-10-2018 SYN_02895 641fca020d83a3710549244cc9a27c65 663 Gene3D G3DSA:1.25.40.10 222 383 9.3E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_02895 641fca020d83a3710549244cc9a27c65 663 Gene3D G3DSA:1.25.40.10 23 221 1.3E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_02895 641fca020d83a3710549244cc9a27c65 663 SUPERFAMILY SSF48452 28 360 3.8E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_02895 641fca020d83a3710549244cc9a27c65 663 Pfam PF13174 Tetratricopeptide repeat 183 212 0.12 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_02895 641fca020d83a3710549244cc9a27c65 663 Pfam PF03783 Curli production assembly/transport component CsgG 394 465 5.6E-7 T 11-10-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 SYN_02895 641fca020d83a3710549244cc9a27c65 663 SMART SM00028 229 262 6.2 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_02895 641fca020d83a3710549244cc9a27c65 663 SMART SM00028 180 213 0.0039 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_02895 641fca020d83a3710549244cc9a27c65 663 SMART SM00028 324 357 52.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_02895 641fca020d83a3710549244cc9a27c65 663 SMART SM00028 24 57 20.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01798 a08eb5852f1a423afbbe5c43caca6af0 415 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 415 243.567 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 SYN_01798 a08eb5852f1a423afbbe5c43caca6af0 415 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 156 360 2.1E-19 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SYN_01798 a08eb5852f1a423afbbe5c43caca6af0 415 Gene3D G3DSA:2.40.50.140 47 123 7.8E-36 T 11-10-2018 SYN_01798 a08eb5852f1a423afbbe5c43caca6af0 415 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 415 3.1E-216 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 SYN_01798 a08eb5852f1a423afbbe5c43caca6af0 415 SUPERFAMILY SSF50249 49 123 8.57E-29 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_01798 a08eb5852f1a423afbbe5c43caca6af0 415 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 1.2E-15 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 SYN_01798 a08eb5852f1a423afbbe5c43caca6af0 415 SMART SM00959 5 47 4.8E-16 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 SYN_01798 a08eb5852f1a423afbbe5c43caca6af0 415 SMART SM00357 52 118 1.1E-19 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 SYN_01798 a08eb5852f1a423afbbe5c43caca6af0 415 SMART SM00382 167 352 1.2E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01798 a08eb5852f1a423afbbe5c43caca6af0 415 Gene3D G3DSA:3.40.50.300 130 414 1.1E-129 T 11-10-2018 SYN_01798 a08eb5852f1a423afbbe5c43caca6af0 415 Pfam PF07497 Rho termination factor, RNA-binding domain 52 124 3.3E-32 T 11-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 SYN_01798 a08eb5852f1a423afbbe5c43caca6af0 415 SUPERFAMILY SSF68912 1 47 3.92E-12 T 11-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily SYN_01798 a08eb5852f1a423afbbe5c43caca6af0 415 Gene3D G3DSA:1.10.720.10 1 46 6.3E-15 T 11-10-2018 SYN_01798 a08eb5852f1a423afbbe5c43caca6af0 415 SUPERFAMILY SSF52540 90 368 2.37E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01817 34c125248dcb38f7965bc47c5a3a9c86 1140 Pfam PF13558 Putative exonuclease SbcCD, C subunit 995 1085 3.2E-22 T 11-10-2018 SYN_01817 34c125248dcb38f7965bc47c5a3a9c86 1140 SUPERFAMILY SSF52540 43 1095 1.68E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01817 34c125248dcb38f7965bc47c5a3a9c86 1140 Pfam PF13555 P-loop containing region of AAA domain 39 99 8.9E-25 T 11-10-2018 SYN_00765 726e3e7832886d689bfe876565d4285a 83 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 11-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_00765 726e3e7832886d689bfe876565d4285a 83 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 79 1.5E-31 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00765 726e3e7832886d689bfe876565d4285a 83 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 23.3 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00765 726e3e7832886d689bfe876565d4285a 83 Pfam PF00886 Ribosomal protein S16 9 67 2.6E-23 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00765 726e3e7832886d689bfe876565d4285a 83 SUPERFAMILY SSF54565 2 79 3.53E-29 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00765 726e3e7832886d689bfe876565d4285a 83 Gene3D G3DSA:3.30.1320.10 1 83 1.8E-33 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00756 ae305f4b1119dd36e59ef40ef8449363 315 Gene3D G3DSA:3.30.1700.10 128 301 1.7E-64 T 11-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 SYN_00756 ae305f4b1119dd36e59ef40ef8449363 315 SUPERFAMILY SSF54211 3 124 1.67E-36 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SYN_00756 ae305f4b1119dd36e59ef40ef8449363 315 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 277 43.406 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 SYN_00756 ae305f4b1119dd36e59ef40ef8449363 315 SUPERFAMILY SSF54211 133 275 2.58E-50 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SYN_00756 ae305f4b1119dd36e59ef40ef8449363 315 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 273 2.6E-109 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 SYN_00756 ae305f4b1119dd36e59ef40ef8449363 315 Gene3D G3DSA:3.30.230.20 1 127 8.7E-46 T 11-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 SYN_00756 ae305f4b1119dd36e59ef40ef8449363 315 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 4 284 7.9E-106 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 SYN_02353 6e340227c3a2efe67d86dd832e4031bd 118 Gene3D G3DSA:1.10.3830.10 2 117 3.6E-31 T 11-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 SYN_02353 6e340227c3a2efe67d86dd832e4031bd 118 Pfam PF01219 Prokaryotic diacylglycerol kinase 12 111 9.1E-28 T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 SYN_01188 466ce5667837d3c8248d57be56b14626 122 Gene3D G3DSA:3.30.420.130 1 116 5.9E-31 T 11-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily SYN_01188 466ce5667837d3c8248d57be56b14626 122 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 13 105 2.5E-21 T 11-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis SYN_01188 466ce5667837d3c8248d57be56b14626 122 SUPERFAMILY SSF53146 1 120 3.66E-29 T 11-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily SYN_00431 3972346913722cdd970ab6060eb72c88 786 SUPERFAMILY SSF47226 9 111 1.83E-18 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 SYN_00431 3972346913722cdd970ab6060eb72c88 786 Gene3D G3DSA:2.40.50.180 529 595 1.3E-30 T 11-10-2018 SYN_00431 3972346913722cdd970ab6060eb72c88 786 Pfam PF01627 Hpt domain 12 105 1.0E-11 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 SYN_00431 3972346913722cdd970ab6060eb72c88 786 SMART SM00073 9 109 3.2E-12 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 SYN_00431 3972346913722cdd970ab6060eb72c88 786 Pfam PF01584 CheW-like domain 511 642 2.2E-14 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 SYN_00431 3972346913722cdd970ab6060eb72c88 786 Gene3D G3DSA:1.20.120.160 3 144 7.0E-21 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 SYN_00431 3972346913722cdd970ab6060eb72c88 786 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 365 504 3.8E-14 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_00431 3972346913722cdd970ab6060eb72c88 786 Gene3D G3DSA:3.40.50.12740 668 786 4.7E-37 T 11-10-2018 SYN_00431 3972346913722cdd970ab6060eb72c88 786 Gene3D G3DSA:3.30.565.10 317 504 1.2E-49 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_00431 3972346913722cdd970ab6060eb72c88 786 Gene3D G3DSA:2.30.30.40 506 636 1.3E-30 T 11-10-2018 SYN_00431 3972346913722cdd970ab6060eb72c88 786 SMART SM00448 668 782 1.3E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00431 3972346913722cdd970ab6060eb72c88 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 422 8.0E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_00431 3972346913722cdd970ab6060eb72c88 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 490 503 8.0E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_00431 3972346913722cdd970ab6060eb72c88 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 484 8.0E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_00431 3972346913722cdd970ab6060eb72c88 786 SUPERFAMILY SSF52172 667 785 1.37E-34 T 11-10-2018 IPR011006 CheY-like superfamily SYN_00431 3972346913722cdd970ab6060eb72c88 786 Pfam PF00072 Response regulator receiver domain 670 782 4.2E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00431 3972346913722cdd970ab6060eb72c88 786 SUPERFAMILY SSF50341 506 640 4.58E-21 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 SYN_00431 3972346913722cdd970ab6060eb72c88 786 SMART SM00260 498 640 3.9E-10 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 SYN_00431 3972346913722cdd970ab6060eb72c88 786 SMART SM00387 362 506 1.7E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_00431 3972346913722cdd970ab6060eb72c88 786 SUPERFAMILY SSF55874 320 504 1.31E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_00939 4daeb1941d11a0015c232ddd031d2033 602 Gene3D G3DSA:3.40.50.300 1 196 9.3E-62 T 11-10-2018 SYN_00939 4daeb1941d11a0015c232ddd031d2033 602 SUPERFAMILY SSF54980 299 384 1.83E-14 T 11-10-2018 IPR035647 EF-G domain III/V-like SYN_00939 4daeb1941d11a0015c232ddd031d2033 602 SUPERFAMILY SSF52540 2 195 5.95E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00939 4daeb1941d11a0015c232ddd031d2033 602 Pfam PF03144 Elongation factor Tu domain 2 216 285 7.3E-13 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 SYN_00939 4daeb1941d11a0015c232ddd031d2033 602 Gene3D G3DSA:3.30.70.870 303 585 1.5E-119 T 11-10-2018 SYN_00939 4daeb1941d11a0015c232ddd031d2033 602 Gene3D G3DSA:3.30.70.240 386 477 1.5E-119 T 11-10-2018 SYN_00939 4daeb1941d11a0015c232ddd031d2033 602 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 146 7.9E-22 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 SYN_00939 4daeb1941d11a0015c232ddd031d2033 602 Pfam PF00679 Elongation factor G C-terminus 394 476 3.0E-20 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like SYN_00939 4daeb1941d11a0015c232ddd031d2033 602 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site SYN_00939 4daeb1941d11a0015c232ddd031d2033 602 SUPERFAMILY SSF54980 395 508 7.19E-25 T 11-10-2018 IPR035647 EF-G domain III/V-like SYN_00939 4daeb1941d11a0015c232ddd031d2033 602 SMART SM00838 395 479 5.4E-4 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like SYN_00939 4daeb1941d11a0015c232ddd031d2033 602 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 3 594 3.5E-265 T 11-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 SYN_00939 4daeb1941d11a0015c232ddd031d2033 602 Gene3D G3DSA:2.40.50.250 478 594 1.5E-119 T 11-10-2018 SYN_00939 4daeb1941d11a0015c232ddd031d2033 602 Gene3D G3DSA:2.40.30.10 197 296 8.5E-32 T 11-10-2018 SYN_00939 4daeb1941d11a0015c232ddd031d2033 602 PRINTS PR00315 GTP-binding elongation factor signature 121 130 1.3E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_00939 4daeb1941d11a0015c232ddd031d2033 602 PRINTS PR00315 GTP-binding elongation factor signature 49 57 1.3E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_00939 4daeb1941d11a0015c232ddd031d2033 602 PRINTS PR00315 GTP-binding elongation factor signature 5 18 1.3E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_00939 4daeb1941d11a0015c232ddd031d2033 602 PRINTS PR00315 GTP-binding elongation factor signature 85 96 1.3E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_00939 4daeb1941d11a0015c232ddd031d2033 602 PRINTS PR00315 GTP-binding elongation factor signature 69 79 1.3E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_00939 4daeb1941d11a0015c232ddd031d2033 602 SUPERFAMILY SSF50447 150 297 6.45E-32 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily SYN_00939 4daeb1941d11a0015c232ddd031d2033 602 Pfam PF00009 Elongation factor Tu GTP binding domain 2 193 2.0E-55 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_02192 160899176233a16ca08e0ba79d65235a 347 TIGRFAM TIGR00277 HDIG: HDIG domain 178 247 3.4E-11 T 11-10-2018 IPR006675 HDIG domain SYN_02192 160899176233a16ca08e0ba79d65235a 347 Gene3D G3DSA:1.10.3210.10 157 316 5.7E-16 T 11-10-2018 SYN_02192 160899176233a16ca08e0ba79d65235a 347 SUPERFAMILY SSF50249 21 122 2.01E-5 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_02192 160899176233a16ca08e0ba79d65235a 347 Pfam PF01966 HD domain 180 298 7.4E-14 T 11-10-2018 IPR006674 HD domain SYN_02192 160899176233a16ca08e0ba79d65235a 347 SMART SM00471 175 308 8.3E-8 T 11-10-2018 IPR003607 HD/PDEase domain SYN_02192 160899176233a16ca08e0ba79d65235a 347 SUPERFAMILY SSF109604 165 302 4.97E-17 T 11-10-2018 SYN_02192 160899176233a16ca08e0ba79d65235a 347 Gene3D G3DSA:2.40.50.140 19 109 8.1E-6 T 11-10-2018 SYN_02192 160899176233a16ca08e0ba79d65235a 347 Pfam PF01336 OB-fold nucleic acid binding domain 46 105 7.4E-7 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SYN_00286 4194d7a6c9ccf693d9c01193a260f8b9 584 SUPERFAMILY SSF89550 342 580 5.89E-54 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 SYN_00286 4194d7a6c9ccf693d9c01193a260f8b9 584 SMART SM00278 56 75 0.69 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SYN_00286 4194d7a6c9ccf693d9c01193a260f8b9 584 SMART SM00278 96 115 2.3 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SYN_00286 4194d7a6c9ccf693d9c01193a260f8b9 584 SMART SM00481 344 423 7.9E-22 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal SYN_00286 4194d7a6c9ccf693d9c01193a260f8b9 584 Gene3D G3DSA:3.20.20.140 332 583 1.7E-75 T 11-10-2018 SYN_00286 4194d7a6c9ccf693d9c01193a260f8b9 584 Gene3D G3DSA:3.30.210.10 265 330 5.6E-22 T 11-10-2018 IPR037160 DNA polymerase, thumb domain superfamily SYN_00286 4194d7a6c9ccf693d9c01193a260f8b9 584 PIRSF PIRSF005047 5 578 4.0E-223 T 11-10-2018 IPR022311 Uncharacterised conserved protein UCP005047, YshC KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SYN_00286 4194d7a6c9ccf693d9c01193a260f8b9 584 SMART SM00483 5 320 1.4E-33 T 11-10-2018 IPR002054 DNA-directed DNA polymerase X GO:0003677|GO:0003887 SYN_00286 4194d7a6c9ccf693d9c01193a260f8b9 584 Pfam PF14520 Helix-hairpin-helix domain 97 151 1.2E-7 T 11-10-2018 SYN_00286 4194d7a6c9ccf693d9c01193a260f8b9 584 SUPERFAMILY SSF47802 5 89 1.83E-21 T 11-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily SYN_00286 4194d7a6c9ccf693d9c01193a260f8b9 584 Gene3D G3DSA:1.10.150.110 3 90 1.1E-27 T 11-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily SYN_00286 4194d7a6c9ccf693d9c01193a260f8b9 584 Gene3D G3DSA:1.10.150.20 91 157 5.4E-19 T 11-10-2018 SYN_00286 4194d7a6c9ccf693d9c01193a260f8b9 584 SUPERFAMILY SSF81301 160 320 1.44E-39 T 11-10-2018 SYN_00286 4194d7a6c9ccf693d9c01193a260f8b9 584 Gene3D G3DSA:3.30.460.10 160 264 9.9E-27 T 11-10-2018 SYN_00286 4194d7a6c9ccf693d9c01193a260f8b9 584 Pfam PF02811 PHP domain 345 462 1.7E-10 T 11-10-2018 IPR004013 PHP domain GO:0003824 SYN_00286 4194d7a6c9ccf693d9c01193a260f8b9 584 Pfam PF14716 Helix-hairpin-helix domain 7 76 1.7E-23 T 11-10-2018 IPR010996 DNA polymerase beta-like, N-terminal domain SYN_00286 4194d7a6c9ccf693d9c01193a260f8b9 584 Pfam PF14791 DNA polymerase beta thumb 259 320 3.0E-18 T 11-10-2018 IPR029398 DNA polymerase beta, thumb domain SYN_00286 4194d7a6c9ccf693d9c01193a260f8b9 584 SUPERFAMILY SSF47781 96 153 3.15E-5 T 11-10-2018 IPR010994 RuvA domain 2-like SYN_01636 a860a11b3001e2879713086cda01a69c 535 SUPERFAMILY SSF55785 175 298 1.05E-20 T 11-10-2018 IPR035965 PAS domain superfamily SYN_01636 a860a11b3001e2879713086cda01a69c 535 Gene3D G3DSA:3.30.450.20 175 298 1.0E-21 T 11-10-2018 SYN_01636 a860a11b3001e2879713086cda01a69c 535 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 185 306 1.5E-23 T 11-10-2018 IPR000014 PAS domain SYN_01636 a860a11b3001e2879713086cda01a69c 535 Pfam PF13426 PAS domain 199 299 2.7E-12 T 11-10-2018 IPR000014 PAS domain SYN_01636 a860a11b3001e2879713086cda01a69c 535 SMART SM00387 423 532 1.7E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_01636 a860a11b3001e2879713086cda01a69c 535 Gene3D G3DSA:1.10.287.130 301 379 7.1E-18 T 11-10-2018 SYN_01636 a860a11b3001e2879713086cda01a69c 535 Pfam PF00512 His Kinase A (phospho-acceptor) domain 317 377 3.1E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_01636 a860a11b3001e2879713086cda01a69c 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 482 492 4.4E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01636 a860a11b3001e2879713086cda01a69c 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 478 4.4E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01636 a860a11b3001e2879713086cda01a69c 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 511 4.4E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01636 a860a11b3001e2879713086cda01a69c 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 529 4.4E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01636 a860a11b3001e2879713086cda01a69c 535 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 424 531 4.0E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_01636 a860a11b3001e2879713086cda01a69c 535 Gene3D G3DSA:3.30.565.10 383 533 9.2E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_01636 a860a11b3001e2879713086cda01a69c 535 SUPERFAMILY SSF55874 371 530 2.75E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_01636 a860a11b3001e2879713086cda01a69c 535 SUPERFAMILY SSF47384 308 377 1.26E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SYN_01636 a860a11b3001e2879713086cda01a69c 535 SMART SM00388 315 381 2.2E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_01636 a860a11b3001e2879713086cda01a69c 535 SMART SM00091 188 253 4.7E-6 T 11-10-2018 IPR000014 PAS domain SYN_02828 871e7ea3885d07b05c747ed3b98c07ae 317 PIRSF PIRSF003092 14 317 4.3E-112 T 11-10-2018 IPR025501 ATP binding protein MinD SYN_02828 871e7ea3885d07b05c747ed3b98c07ae 317 SUPERFAMILY SSF52540 52 296 1.13E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02828 871e7ea3885d07b05c747ed3b98c07ae 317 Pfam PF13614 AAA domain 52 211 2.5E-19 T 11-10-2018 IPR025669 AAA domain SYN_02828 871e7ea3885d07b05c747ed3b98c07ae 317 Gene3D G3DSA:3.40.50.300 51 293 3.9E-59 T 11-10-2018 SYN_03364 77c40b675318eae8c2f5ac493ce04def 72 Gene3D G3DSA:1.10.260.40 2 65 2.3E-8 T 11-10-2018 SYN_03364 77c40b675318eae8c2f5ac493ce04def 72 Pfam PF01381 Helix-turn-helix 6 60 2.1E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SYN_03364 77c40b675318eae8c2f5ac493ce04def 72 SUPERFAMILY SSF47413 4 63 2.46E-7 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 SYN_03364 77c40b675318eae8c2f5ac493ce04def 72 SMART SM00530 5 61 6.1E-4 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SYN_02227 7517cf0c65b678506fbcf6056c883596 421 Gene3D G3DSA:1.10.443.10 224 406 3.0E-40 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 SYN_02227 7517cf0c65b678506fbcf6056c883596 421 Pfam PF00589 Phage integrase family 223 388 9.7E-30 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SYN_02227 7517cf0c65b678506fbcf6056c883596 421 Gene3D G3DSA:1.10.150.130 113 223 2.3E-14 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal SYN_02227 7517cf0c65b678506fbcf6056c883596 421 SUPERFAMILY SSF56349 123 396 6.18E-59 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SYN_00984 732eb805c164a4bf75838d3570583635 109 Gene3D G3DSA:3.30.70.600 3 109 1.6E-38 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily SYN_00984 732eb805c164a4bf75838d3570583635 109 SMART SM01403 14 108 2.6E-58 T 11-10-2018 IPR027486 Ribosomal protein S10 domain SYN_00984 732eb805c164a4bf75838d3570583635 109 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 10 109 27.135 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00984 732eb805c164a4bf75838d3570583635 109 ProSitePatterns PS00361 Ribosomal protein S10 signature. 36 51 - T 11-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00984 732eb805c164a4bf75838d3570583635 109 Pfam PF00338 Ribosomal protein S10p/S20e 14 108 1.4E-37 T 11-10-2018 IPR027486 Ribosomal protein S10 domain SYN_00984 732eb805c164a4bf75838d3570583635 109 PRINTS PR00971 Ribosomal protein S10 family signature 68 82 1.5E-19 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00984 732eb805c164a4bf75838d3570583635 109 PRINTS PR00971 Ribosomal protein S10 family signature 12 25 1.5E-19 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00984 732eb805c164a4bf75838d3570583635 109 PRINTS PR00971 Ribosomal protein S10 family signature 47 62 1.5E-19 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00984 732eb805c164a4bf75838d3570583635 109 SUPERFAMILY SSF54999 12 108 1.44E-38 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily SYN_00984 732eb805c164a4bf75838d3570583635 109 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 11 108 1.6E-46 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_01112 0179078900d536ba19c8e5f6c2332314 339 Gene3D G3DSA:3.40.50.720 8 320 2.8E-98 T 11-10-2018 SYN_01112 0179078900d536ba19c8e5f6c2332314 339 PRINTS PR01713 Nucleotide sugar epimerase signature 260 275 6.1E-31 T 11-10-2018 SYN_01112 0179078900d536ba19c8e5f6c2332314 339 PRINTS PR01713 Nucleotide sugar epimerase signature 33 49 6.1E-31 T 11-10-2018 SYN_01112 0179078900d536ba19c8e5f6c2332314 339 PRINTS PR01713 Nucleotide sugar epimerase signature 299 316 6.1E-31 T 11-10-2018 SYN_01112 0179078900d536ba19c8e5f6c2332314 339 PRINTS PR01713 Nucleotide sugar epimerase signature 220 235 6.1E-31 T 11-10-2018 SYN_01112 0179078900d536ba19c8e5f6c2332314 339 SUPERFAMILY SSF51735 1 337 1.21E-93 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_01112 0179078900d536ba19c8e5f6c2332314 339 Gene3D G3DSA:3.90.25.10 184 332 2.8E-98 T 11-10-2018 SYN_01112 0179078900d536ba19c8e5f6c2332314 339 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 266 1.7E-56 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 SYN_02485 31aaeb085a6b8faaab92e2c6f911b53f 887 Pfam PF00702 haloacid dehalogenase-like hydrolase 324 622 1.2E-20 T 11-10-2018 SYN_02485 31aaeb085a6b8faaab92e2c6f911b53f 887 Pfam PF00122 E1-E2 ATPase 117 307 1.0E-49 T 11-10-2018 SYN_02485 31aaeb085a6b8faaab92e2c6f911b53f 887 Gene3D G3DSA:1.20.1110.10 53 876 1.7E-288 T 11-10-2018 SYN_02485 31aaeb085a6b8faaab92e2c6f911b53f 887 SUPERFAMILY SSF81653 119 226 1.11E-27 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 SYN_02485 31aaeb085a6b8faaab92e2c6f911b53f 887 SMART SM00831 2 75 7.8E-19 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 SYN_02485 31aaeb085a6b8faaab92e2c6f911b53f 887 Gene3D G3DSA:2.70.150.10 16 230 1.7E-288 T 11-10-2018 SYN_02485 31aaeb085a6b8faaab92e2c6f911b53f 887 Pfam PF00689 Cation transporting ATPase, C-terminus 692 877 1.6E-48 T 11-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 SYN_02485 31aaeb085a6b8faaab92e2c6f911b53f 887 Pfam PF00690 Cation transporter/ATPase, N-terminus 5 69 6.0E-17 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 SYN_02485 31aaeb085a6b8faaab92e2c6f911b53f 887 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 381 551 5.8E-19 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SYN_02485 31aaeb085a6b8faaab92e2c6f911b53f 887 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 89 348 7.4E-40 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SYN_02485 31aaeb085a6b8faaab92e2c6f911b53f 887 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 579 695 9.7E-35 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SYN_02485 31aaeb085a6b8faaab92e2c6f911b53f 887 SUPERFAMILY SSF81665 6 882 7.32E-117 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 SYN_02485 31aaeb085a6b8faaab92e2c6f911b53f 887 SUPERFAMILY SSF81660 336 513 2.58E-42 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 SYN_02485 31aaeb085a6b8faaab92e2c6f911b53f 887 SUPERFAMILY SSF56784 325 713 1.26E-61 T 11-10-2018 IPR036412 HAD-like superfamily SYN_02485 31aaeb085a6b8faaab92e2c6f911b53f 887 Gene3D G3DSA:3.40.1110.10 337 512 1.7E-288 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 SYN_02485 31aaeb085a6b8faaab92e2c6f911b53f 887 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 580 596 1.5E-18 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SYN_02485 31aaeb085a6b8faaab92e2c6f911b53f 887 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 463 481 1.5E-18 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SYN_02485 31aaeb085a6b8faaab92e2c6f911b53f 887 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 608 624 1.5E-18 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SYN_02485 31aaeb085a6b8faaab92e2c6f911b53f 887 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 640 665 1.5E-18 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SYN_02485 31aaeb085a6b8faaab92e2c6f911b53f 887 Gene3D G3DSA:3.40.50.1000 324 653 1.7E-288 T 11-10-2018 IPR023214 HAD superfamily SYN_02485 31aaeb085a6b8faaab92e2c6f911b53f 887 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 329 335 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 SYN_02485 31aaeb085a6b8faaab92e2c6f911b53f 887 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 527 537 1.3E-40 T 11-10-2018 SYN_02485 31aaeb085a6b8faaab92e2c6f911b53f 887 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 327 341 1.3E-40 T 11-10-2018 SYN_02485 31aaeb085a6b8faaab92e2c6f911b53f 887 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 167 181 1.3E-40 T 11-10-2018 SYN_02485 31aaeb085a6b8faaab92e2c6f911b53f 887 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 632 644 1.3E-40 T 11-10-2018 SYN_02485 31aaeb085a6b8faaab92e2c6f911b53f 887 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 505 516 1.3E-40 T 11-10-2018 SYN_02485 31aaeb085a6b8faaab92e2c6f911b53f 887 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 608 627 1.3E-40 T 11-10-2018 SYN_02445 a3ba1d5033bb58d9d5e3bafa694ff189 479 Gene3D G3DSA:2.40.110.10 148 275 8.2E-42 T 11-10-2018 SYN_02445 a3ba1d5033bb58d9d5e3bafa694ff189 479 SUPERFAMILY SSF47203 264 478 8.79E-63 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 SYN_02445 a3ba1d5033bb58d9d5e3bafa694ff189 479 SUPERFAMILY SSF56645 3 274 6.68E-77 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 SYN_02445 a3ba1d5033bb58d9d5e3bafa694ff189 479 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 282 476 9.3E-63 T 11-10-2018 IPR024719 HpaB/PvcC/4-BUDH C-terminal SYN_02445 a3ba1d5033bb58d9d5e3bafa694ff189 479 Gene3D G3DSA:1.10.3140.10 2 145 1.8E-49 T 11-10-2018 SYN_02445 a3ba1d5033bb58d9d5e3bafa694ff189 479 Gene3D G3DSA:1.20.140.10 277 478 4.4E-71 T 11-10-2018 SYN_02445 a3ba1d5033bb58d9d5e3bafa694ff189 479 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 5 273 1.1E-88 T 11-10-2018 IPR024674 HpaB/PvcC/4-BUDH N-terminal SYN_02445 a3ba1d5033bb58d9d5e3bafa694ff189 479 PIRSF PIRSF000331 1 479 1.5E-140 T 11-10-2018 IPR004925 HpaB/PvcC/4-BUDH SYN_01998 cff84689d54edd61951471b7b97dca92 687 Pfam PF00905 Penicillin binding protein transpeptidase domain 336 576 6.0E-27 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SYN_01998 cff84689d54edd61951471b7b97dca92 687 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 89 613 3.5E-176 T 11-10-2018 SYN_01998 cff84689d54edd61951471b7b97dca92 687 SUPERFAMILY SSF53955 72 275 6.47E-70 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily SYN_01998 cff84689d54edd61951471b7b97dca92 687 Gene3D G3DSA:1.10.3810.10 72 268 1.1E-72 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SYN_01998 cff84689d54edd61951471b7b97dca92 687 Gene3D G3DSA:3.40.710.10 272 659 6.8E-119 T 11-10-2018 SYN_01998 cff84689d54edd61951471b7b97dca92 687 Pfam PF00912 Transglycosylase 83 253 2.9E-62 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SYN_01998 cff84689d54edd61951471b7b97dca92 687 SUPERFAMILY SSF56601 238 671 2.73E-126 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like SYN_01067 798cb0bd4521ddd136cac7251ce575b2 111 Pfam PF07883 Cupin domain 48 107 5.0E-8 T 11-10-2018 IPR013096 Cupin 2, conserved barrel SYN_01067 798cb0bd4521ddd136cac7251ce575b2 111 Gene3D G3DSA:2.60.120.10 19 111 5.1E-35 T 11-10-2018 IPR014710 RmlC-like jelly roll fold SYN_01067 798cb0bd4521ddd136cac7251ce575b2 111 SUPERFAMILY SSF51182 5 111 5.69E-17 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily SYN_02801 384048d03dbb12a830d2c7e76f8887ac 494 Gene3D G3DSA:3.40.50.2300 6 150 1.9E-37 T 11-10-2018 SYN_02801 384048d03dbb12a830d2c7e76f8887ac 494 Gene3D G3DSA:3.30.450.40 176 312 1.7E-14 T 11-10-2018 IPR029016 GAF-like domain superfamily SYN_02801 384048d03dbb12a830d2c7e76f8887ac 494 SMART SM00448 16 128 2.0E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_02801 384048d03dbb12a830d2c7e76f8887ac 494 SUPERFAMILY SSF55781 171 314 1.54E-13 T 11-10-2018 SYN_02801 384048d03dbb12a830d2c7e76f8887ac 494 SUPERFAMILY SSF52172 15 146 1.21E-38 T 11-10-2018 IPR011006 CheY-like superfamily SYN_02801 384048d03dbb12a830d2c7e76f8887ac 494 SUPERFAMILY SSF109604 321 493 5.83E-37 T 11-10-2018 SYN_02801 384048d03dbb12a830d2c7e76f8887ac 494 Pfam PF01966 HD domain 334 455 3.1E-21 T 11-10-2018 IPR006674 HD domain SYN_02801 384048d03dbb12a830d2c7e76f8887ac 494 TIGRFAM TIGR00277 HDIG: HDIG domain 332 423 1.5E-9 T 11-10-2018 IPR006675 HDIG domain SYN_02801 384048d03dbb12a830d2c7e76f8887ac 494 Pfam PF13492 GAF domain 179 303 3.2E-7 T 11-10-2018 IPR003018 GAF domain GO:0005515 SYN_02801 384048d03dbb12a830d2c7e76f8887ac 494 SMART SM00471 329 464 5.0E-11 T 11-10-2018 IPR003607 HD/PDEase domain SYN_02801 384048d03dbb12a830d2c7e76f8887ac 494 Gene3D G3DSA:1.10.3210.10 313 494 2.4E-67 T 11-10-2018 SYN_02801 384048d03dbb12a830d2c7e76f8887ac 494 Pfam PF00072 Response regulator receiver domain 18 128 5.0E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00212 dd26d014cfeb96dab6435c3e8c312aa5 325 Hamap MF_01694 Biotin synthase [bioB]. 20 325 39.886 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 SYN_00212 dd26d014cfeb96dab6435c3e8c312aa5 325 Gene3D G3DSA:3.20.20.70 23 324 3.2E-106 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_00212 dd26d014cfeb96dab6435c3e8c312aa5 325 PIRSF PIRSF001619 3 323 7.8E-106 T 11-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 SYN_00212 dd26d014cfeb96dab6435c3e8c312aa5 325 SMART SM00729 60 268 6.8E-34 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SYN_00212 dd26d014cfeb96dab6435c3e8c312aa5 325 Pfam PF04055 Radical SAM superfamily 69 224 3.0E-14 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_00212 dd26d014cfeb96dab6435c3e8c312aa5 325 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 236 322 1.5E-13 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 SYN_00212 dd26d014cfeb96dab6435c3e8c312aa5 325 TIGRFAM TIGR00433 bioB: biotin synthase 33 322 1.2E-112 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 SYN_00212 dd26d014cfeb96dab6435c3e8c312aa5 325 SMART SM00876 236 322 4.7E-26 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 SYN_00212 dd26d014cfeb96dab6435c3e8c312aa5 325 SUPERFAMILY SSF102114 25 310 1.57E-64 T 11-10-2018 SYN_00326 32bb07f31f84ac4dc4a389366c385cc6 377 Pfam PF01546 Peptidase family M20/M25/M40 77 372 1.0E-22 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 SYN_00326 32bb07f31f84ac4dc4a389366c385cc6 377 SUPERFAMILY SSF53187 11 375 3.14E-44 T 11-10-2018 SYN_00326 32bb07f31f84ac4dc4a389366c385cc6 377 SUPERFAMILY SSF55031 178 287 2.24E-11 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain SYN_00326 32bb07f31f84ac4dc4a389366c385cc6 377 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 146 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 SYN_00326 32bb07f31f84ac4dc4a389366c385cc6 377 Gene3D G3DSA:3.40.630.10 24 361 2.4E-62 T 11-10-2018 SYN_00326 32bb07f31f84ac4dc4a389366c385cc6 377 Gene3D G3DSA:3.30.70.360 178 291 2.4E-62 T 11-10-2018 SYN_00326 32bb07f31f84ac4dc4a389366c385cc6 377 Pfam PF07687 Peptidase dimerisation domain 175 274 8.9E-11 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain SYN_01150 f4aed9fe373407838fa53eac49a98995 336 SUPERFAMILY SSF53901 192 336 1.99E-12 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 SYN_01150 f4aed9fe373407838fa53eac49a98995 336 SUPERFAMILY SSF53901 12 184 5.38E-19 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 SYN_01150 f4aed9fe373407838fa53eac49a98995 336 Gene3D G3DSA:3.40.47.10 8 336 9.2E-39 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 SYN_01150 f4aed9fe373407838fa53eac49a98995 336 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 127 198 2.3E-5 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 SYN_02551 91b48ac2b2f4c286408a664fc62f2522 670 Pfam PF13538 UvrD-like helicase C-terminal domain 590 636 4.5E-14 T 11-10-2018 IPR027785 UvrD-like helicase C-terminal domain SYN_02551 91b48ac2b2f4c286408a664fc62f2522 670 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 26 659 56.027 T 11-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 SYN_02551 91b48ac2b2f4c286408a664fc62f2522 670 Gene3D G3DSA:3.40.50.300 531 650 4.6E-26 T 11-10-2018 SYN_02551 91b48ac2b2f4c286408a664fc62f2522 670 Gene3D G3DSA:3.40.50.300 420 530 7.1E-19 T 11-10-2018 SYN_02551 91b48ac2b2f4c286408a664fc62f2522 670 Pfam PF13604 AAA domain 204 373 2.6E-29 T 11-10-2018 SYN_02551 91b48ac2b2f4c286408a664fc62f2522 670 SMART SM00382 212 482 0.0054 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_02551 91b48ac2b2f4c286408a664fc62f2522 670 SUPERFAMILY SSF52540 40 415 1.94E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02551 91b48ac2b2f4c286408a664fc62f2522 670 Gene3D G3DSA:3.40.50.300 137 386 5.6E-57 T 11-10-2018 SYN_02551 91b48ac2b2f4c286408a664fc62f2522 670 Gene3D G3DSA:1.10.10.1020 19 136 2.0E-16 T 11-10-2018 SYN_02551 91b48ac2b2f4c286408a664fc62f2522 670 SUPERFAMILY SSF52540 325 662 5.76E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02551 91b48ac2b2f4c286408a664fc62f2522 670 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 27 659 1.1E-156 T 11-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 SYN_02231 3fb3f4b26b65867b469b5ec64b996ff5 374 SUPERFAMILY SSF56300 10 302 3.86E-27 T 11-10-2018 SYN_02231 3fb3f4b26b65867b469b5ec64b996ff5 374 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 11 293 1.8E-72 T 11-10-2018 IPR019079 Capsule synthesis protein, CapA SYN_02231 3fb3f4b26b65867b469b5ec64b996ff5 374 SMART SM00854 11 293 8.2E-112 T 11-10-2018 IPR019079 Capsule synthesis protein, CapA SYN_02374 399d6ab9a8fc095c172122f7b35321ff 862 Gene3D G3DSA:3.10.330.110 575 623 0.0 T 11-10-2018 SYN_02374 399d6ab9a8fc095c172122f7b35321ff 862 Gene3D G3DSA:3.40.50.620 33 574 0.0 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_02374 399d6ab9a8fc095c172122f7b35321ff 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 532 554 7.1E-47 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 SYN_02374 399d6ab9a8fc095c172122f7b35321ff 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 7.1E-47 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 SYN_02374 399d6ab9a8fc095c172122f7b35321ff 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 565 575 7.1E-47 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 SYN_02374 399d6ab9a8fc095c172122f7b35321ff 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 492 510 7.1E-47 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 SYN_02374 399d6ab9a8fc095c172122f7b35321ff 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 7.1E-47 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 SYN_02374 399d6ab9a8fc095c172122f7b35321ff 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 7.1E-47 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 SYN_02374 399d6ab9a8fc095c172122f7b35321ff 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 7.1E-47 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 SYN_02374 399d6ab9a8fc095c172122f7b35321ff 862 SUPERFAMILY SSF52374 5 661 5.2E-150 T 11-10-2018 SYN_02374 399d6ab9a8fc095c172122f7b35321ff 862 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 860 22.935 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 SYN_02374 399d6ab9a8fc095c172122f7b35321ff 862 Pfam PF08264 Anticodon-binding domain of tRNA 698 823 2.1E-20 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 SYN_02374 399d6ab9a8fc095c172122f7b35321ff 862 Gene3D G3DSA:1.10.730.10 8 791 0.0 T 11-10-2018 SYN_02374 399d6ab9a8fc095c172122f7b35321ff 862 Pfam PF09334 tRNA synthetases class I (M) 41 182 6.9E-25 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_02374 399d6ab9a8fc095c172122f7b35321ff 862 Gene3D G3DSA:3.90.740.10 227 418 0.0 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 SYN_02374 399d6ab9a8fc095c172122f7b35321ff 862 SUPERFAMILY SSF47323 657 861 2.43E-35 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_02374 399d6ab9a8fc095c172122f7b35321ff 862 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_02374 399d6ab9a8fc095c172122f7b35321ff 862 SUPERFAMILY SSF50677 226 419 1.26E-48 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 SYN_02374 399d6ab9a8fc095c172122f7b35321ff 862 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 610 654 2.0E-7 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_02374 399d6ab9a8fc095c172122f7b35321ff 862 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 421 581 2.2E-6 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_02374 399d6ab9a8fc095c172122f7b35321ff 862 Gene3D G3DSA:3.10.20.590 799 862 9.9E-22 T 11-10-2018 SYN_02374 399d6ab9a8fc095c172122f7b35321ff 862 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 407 4.6E-65 T 11-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 SYN_02374 399d6ab9a8fc095c172122f7b35321ff 862 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 7 861 0.0 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 SYN_02194 8df9ae980ad6ef56e09bdd48122b6ae9 532 Gene3D G3DSA:1.10.238.260 286 397 1.2E-24 T 11-10-2018 SYN_02194 8df9ae980ad6ef56e09bdd48122b6ae9 532 SUPERFAMILY SSF110921 403 516 4.45E-22 T 11-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SYN_02194 8df9ae980ad6ef56e09bdd48122b6ae9 532 Pfam PF00682 HMGL-like 7 258 8.2E-42 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 SYN_02194 8df9ae980ad6ef56e09bdd48122b6ae9 532 Pfam PF08502 LeuA allosteric (dimerisation) domain 380 519 2.1E-28 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SYN_02194 8df9ae980ad6ef56e09bdd48122b6ae9 532 SUPERFAMILY SSF51569 4 296 3.11E-80 T 11-10-2018 SYN_02194 8df9ae980ad6ef56e09bdd48122b6ae9 532 TIGRFAM TIGR00977 citramal_synth: citramalate synthase 7 526 3.6E-225 T 11-10-2018 IPR005675 Citramalate synthase GO:0019752|GO:0046912 KEGG: 00290+2.3.1.182|KEGG: 00660+2.3.1.182|MetaCyc: PWY-5101 SYN_02194 8df9ae980ad6ef56e09bdd48122b6ae9 532 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 14 30 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SYN_02194 8df9ae980ad6ef56e09bdd48122b6ae9 532 Gene3D G3DSA:3.20.20.70 5 285 1.3E-82 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_02194 8df9ae980ad6ef56e09bdd48122b6ae9 532 Gene3D G3DSA:3.30.160.270 400 519 9.9E-8 T 11-10-2018 SYN_02194 8df9ae980ad6ef56e09bdd48122b6ae9 532 SMART SM00917 378 520 1.0E-38 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SYN_01413 4197309c5fc41e7f96f3e937751256b9 203 SUPERFAMILY SSF53955 64 191 1.01E-32 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily SYN_01413 4197309c5fc41e7f96f3e937751256b9 203 Gene3D G3DSA:1.10.530.10 51 197 2.6E-35 T 11-10-2018 SYN_01413 4197309c5fc41e7f96f3e937751256b9 203 Pfam PF01464 Transglycosylase SLT domain 68 174 8.8E-26 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 SYN_02622 e7127115e1037248a6cf01602303ab3d 294 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 5 293 16.895 T 11-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 SYN_02622 e7127115e1037248a6cf01602303ab3d 294 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 19 266 2.9E-34 T 11-10-2018 SYN_02622 e7127115e1037248a6cf01602303ab3d 294 Pfam PF01040 UbiA prenyltransferase family 22 261 6.2E-34 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 SYN_02622 e7127115e1037248a6cf01602303ab3d 294 Gene3D G3DSA:1.10.357.140 18 170 4.2E-5 T 11-10-2018 SYN_02622 e7127115e1037248a6cf01602303ab3d 294 PIRSF PIRSF005355 1 294 1.9E-89 T 11-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 SYN_02603 2c66679f6a1084503a9be12ea4951b6d 453 SUPERFAMILY SSF75304 67 449 3.92E-68 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SYN_02603 2c66679f6a1084503a9be12ea4951b6d 453 Pfam PF01425 Amidase 155 439 1.6E-35 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SYN_02603 2c66679f6a1084503a9be12ea4951b6d 453 Pfam PF01425 Amidase 68 138 9.5E-15 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SYN_02603 2c66679f6a1084503a9be12ea4951b6d 453 Gene3D G3DSA:3.90.1300.10 32 452 2.6E-74 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SYN_00886 bb8c69d13fce1278181aec56ac40422f 404 ProSitePatterns PS00433 Phosphofructokinase signature. 322 340 - T 11-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 SYN_00886 bb8c69d13fce1278181aec56ac40422f 404 Pfam PF00365 Phosphofructokinase 40 354 3.2E-95 T 11-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 SYN_00886 bb8c69d13fce1278181aec56ac40422f 404 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 318 340 7.1E-60 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 SYN_00886 bb8c69d13fce1278181aec56ac40422f 404 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 194 212 7.1E-60 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 SYN_00886 bb8c69d13fce1278181aec56ac40422f 404 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 214 230 7.1E-60 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 SYN_00886 bb8c69d13fce1278181aec56ac40422f 404 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 193 7.1E-60 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 SYN_00886 bb8c69d13fce1278181aec56ac40422f 404 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 268 280 7.1E-60 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 SYN_00886 bb8c69d13fce1278181aec56ac40422f 404 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 43 62 7.1E-60 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 SYN_00886 bb8c69d13fce1278181aec56ac40422f 404 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 149 165 7.1E-60 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 SYN_00886 bb8c69d13fce1278181aec56ac40422f 404 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 232 249 7.1E-60 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 SYN_00886 bb8c69d13fce1278181aec56ac40422f 404 Gene3D G3DSA:3.40.50.450 41 379 4.0E-103 T 11-10-2018 SYN_00886 bb8c69d13fce1278181aec56ac40422f 404 Gene3D G3DSA:3.40.50.460 196 334 4.0E-103 T 11-10-2018 SYN_00886 bb8c69d13fce1278181aec56ac40422f 404 SUPERFAMILY SSF53784 38 396 6.54E-113 T 11-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 SYN_03201 cb63f9d644ad0d853234c76d6cfccfa4 308 Gene3D G3DSA:3.40.140.10 182 306 1.1E-42 T 11-10-2018 SYN_03201 cb63f9d644ad0d853234c76d6cfccfa4 308 SUPERFAMILY SSF47781 102 165 3.5E-7 T 11-10-2018 IPR010994 RuvA domain 2-like SYN_03201 cb63f9d644ad0d853234c76d6cfccfa4 308 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 255 260 - T 11-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site SYN_03201 cb63f9d644ad0d853234c76d6cfccfa4 308 TIGRFAM TIGR00608 radc: DNA repair protein RadC 94 305 3.0E-62 T 11-10-2018 IPR001405 Uncharacterised protein family UPF0758 SYN_03201 cb63f9d644ad0d853234c76d6cfccfa4 308 Gene3D G3DSA:1.10.150.20 127 167 2.1E-7 T 11-10-2018 SYN_03201 cb63f9d644ad0d853234c76d6cfccfa4 308 Pfam PF04002 RadC-like JAB domain 187 304 1.1E-40 T 11-10-2018 IPR025657 RadC-like JAB domain SYN_02759 a317b9c6c875fc0cb1ca913647be6d50 1202 SMART SM00490 886 970 2.7E-17 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_02759 a317b9c6c875fc0cb1ca913647be6d50 1202 SMART SM00982 1064 1164 4.0E-38 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 SYN_02759 a317b9c6c875fc0cb1ca913647be6d50 1202 SUPERFAMILY SSF141259 531 608 1.7E-22 T 11-10-2018 IPR036101 CarD-like/TRCF domain superfamily SYN_02759 a317b9c6c875fc0cb1ca913647be6d50 1202 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 159 1137 0.0 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 SYN_02759 a317b9c6c875fc0cb1ca913647be6d50 1202 SMART SM00487 660 849 5.2E-31 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain SYN_02759 a317b9c6c875fc0cb1ca913647be6d50 1202 SUPERFAMILY SSF52540 427 527 4.2E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02759 a317b9c6c875fc0cb1ca913647be6d50 1202 SMART SM01058 539 636 7.0E-43 T 11-10-2018 IPR003711 CarD-like/TRCF domain SYN_02759 a317b9c6c875fc0cb1ca913647be6d50 1202 Pfam PF02559 CarD-like/TRCF domain 540 635 6.3E-27 T 11-10-2018 IPR003711 CarD-like/TRCF domain SYN_02759 a317b9c6c875fc0cb1ca913647be6d50 1202 SUPERFAMILY SSF52540 842 1050 1.13E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02759 a317b9c6c875fc0cb1ca913647be6d50 1202 Pfam PF03461 TRCF domain 1066 1158 5.4E-25 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 SYN_02759 a317b9c6c875fc0cb1ca913647be6d50 1202 SUPERFAMILY SSF143517 1053 1201 9.68E-34 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain SYN_02759 a317b9c6c875fc0cb1ca913647be6d50 1202 Gene3D G3DSA:3.90.1150.50 1061 1202 5.5E-33 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain SYN_02759 a317b9c6c875fc0cb1ca913647be6d50 1202 Pfam PF00271 Helicase conserved C-terminal domain 869 969 4.8E-13 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_02759 a317b9c6c875fc0cb1ca913647be6d50 1202 SUPERFAMILY SSF52540 583 843 2.97E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02759 a317b9c6c875fc0cb1ca913647be6d50 1202 Pfam PF00270 DEAD/DEAH box helicase 665 822 6.2E-18 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SYN_02759 a317b9c6c875fc0cb1ca913647be6d50 1202 Gene3D G3DSA:3.40.50.11180 37 370 3.9E-74 T 11-10-2018 SYN_02759 a317b9c6c875fc0cb1ca913647be6d50 1202 Gene3D G3DSA:3.40.50.300 602 841 1.2E-233 T 11-10-2018 SYN_02759 a317b9c6c875fc0cb1ca913647be6d50 1202 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 44 1164 27.337 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 SYN_02759 a317b9c6c875fc0cb1ca913647be6d50 1202 Gene3D G3DSA:3.40.50.300 539 1050 1.2E-233 T 11-10-2018 SYN_02759 a317b9c6c875fc0cb1ca913647be6d50 1202 SUPERFAMILY SSF52540 20 378 2.73E-78 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02759 a317b9c6c875fc0cb1ca913647be6d50 1202 Gene3D G3DSA:3.30.2060.10 142 227 3.9E-74 T 11-10-2018 SYN_02759 a317b9c6c875fc0cb1ca913647be6d50 1202 Gene3D G3DSA:2.30.30.840 543 601 1.2E-233 T 11-10-2018 SYN_00982 79b0e5e3337b1b523756ca5e37d55e01 538 SUPERFAMILY SSF52540 150 370 5.88E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00982 79b0e5e3337b1b523756ca5e37d55e01 538 TIGRFAM TIGR00416 sms: DNA repair protein RadA 87 533 7.6E-183 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 SYN_00982 79b0e5e3337b1b523756ca5e37d55e01 538 Gene3D G3DSA:3.40.50.300 145 368 1.3E-43 T 11-10-2018 SYN_00982 79b0e5e3337b1b523756ca5e37d55e01 538 Pfam PF13481 AAA domain 163 304 5.0E-14 T 11-10-2018 SYN_00982 79b0e5e3337b1b523756ca5e37d55e01 538 Gene3D G3DSA:3.30.230.10 407 538 1.0E-17 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SYN_00982 79b0e5e3337b1b523756ca5e37d55e01 538 SMART SM00382 172 326 1.5E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00982 79b0e5e3337b1b523756ca5e37d55e01 538 Hamap MF_01498 DNA repair protein RadA [radA]. 106 538 43.843 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 SYN_00982 79b0e5e3337b1b523756ca5e37d55e01 538 Pfam PF13541 Subunit ChlI of Mg-chelatase 426 510 7.7E-7 T 11-10-2018 SYN_00982 79b0e5e3337b1b523756ca5e37d55e01 538 PRINTS PR01874 DNA repair protein radA signature 256 280 2.7E-88 T 11-10-2018 SYN_00982 79b0e5e3337b1b523756ca5e37d55e01 538 PRINTS PR01874 DNA repair protein radA signature 404 427 2.7E-88 T 11-10-2018 SYN_00982 79b0e5e3337b1b523756ca5e37d55e01 538 PRINTS PR01874 DNA repair protein radA signature 295 323 2.7E-88 T 11-10-2018 SYN_00982 79b0e5e3337b1b523756ca5e37d55e01 538 PRINTS PR01874 DNA repair protein radA signature 330 356 2.7E-88 T 11-10-2018 SYN_00982 79b0e5e3337b1b523756ca5e37d55e01 538 PRINTS PR01874 DNA repair protein radA signature 95 119 2.7E-88 T 11-10-2018 SYN_00982 79b0e5e3337b1b523756ca5e37d55e01 538 PRINTS PR01874 DNA repair protein radA signature 164 192 2.7E-88 T 11-10-2018 SYN_00982 79b0e5e3337b1b523756ca5e37d55e01 538 PRINTS PR01874 DNA repair protein radA signature 206 223 2.7E-88 T 11-10-2018 SYN_00982 79b0e5e3337b1b523756ca5e37d55e01 538 SUPERFAMILY SSF54211 337 538 1.4E-38 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SYN_03439 9f99392466c9b5ccebbd2b317da00234 44 Pfam PF01894 Uncharacterised protein family UPF0047 1 41 8.2E-11 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 SYN_03439 9f99392466c9b5ccebbd2b317da00234 44 SUPERFAMILY SSF111038 1 44 3.14E-13 T 11-10-2018 IPR035917 YjbQ-like superfamily SYN_03439 9f99392466c9b5ccebbd2b317da00234 44 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 5 23 - T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 SYN_03439 9f99392466c9b5ccebbd2b317da00234 44 Gene3D G3DSA:2.60.120.460 1 44 1.2E-13 T 11-10-2018 IPR035917 YjbQ-like superfamily SYN_02300 6855eed2274b62442c1feafdd5845b76 353 Pfam PF10123 Mu-like prophage I protein 29 350 1.2E-85 T 11-10-2018 IPR012106 Protease, Mu phage/prophage I type SYN_02300 6855eed2274b62442c1feafdd5845b76 353 PIRSF PIRSF016624 12 350 7.2E-34 T 11-10-2018 IPR012106 Protease, Mu phage/prophage I type SYN_00715 2b6191d6c4ac520afcdc3dc8ff234d74 716 Gene3D G3DSA:3.30.450.20 315 443 4.8E-21 T 11-10-2018 SYN_00715 2b6191d6c4ac520afcdc3dc8ff234d74 716 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 687 699 3.8E-5 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_00715 2b6191d6c4ac520afcdc3dc8ff234d74 716 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 657 671 3.8E-5 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_00715 2b6191d6c4ac520afcdc3dc8ff234d74 716 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 671 687 3.8E-5 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_00715 2b6191d6c4ac520afcdc3dc8ff234d74 716 Gene3D G3DSA:1.10.10.10 655 714 1.6E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_00715 2b6191d6c4ac520afcdc3dc8ff234d74 716 Gene3D G3DSA:3.30.450.20 444 573 5.2E-21 T 11-10-2018 SYN_00715 2b6191d6c4ac520afcdc3dc8ff234d74 716 Pfam PF00196 Bacterial regulatory proteins, luxR family 656 704 5.2E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_00715 2b6191d6c4ac520afcdc3dc8ff234d74 716 Pfam PF13188 PAS domain 189 232 3.4E-6 T 11-10-2018 IPR000014 PAS domain SYN_00715 2b6191d6c4ac520afcdc3dc8ff234d74 716 SMART SM00421 654 711 1.2E-7 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_00715 2b6191d6c4ac520afcdc3dc8ff234d74 716 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 440 565 7.9E-19 T 11-10-2018 IPR000014 PAS domain SYN_00715 2b6191d6c4ac520afcdc3dc8ff234d74 716 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 67 183 3.1E-7 T 11-10-2018 IPR000014 PAS domain SYN_00715 2b6191d6c4ac520afcdc3dc8ff234d74 716 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 321 438 1.9E-13 T 11-10-2018 IPR000014 PAS domain SYN_00715 2b6191d6c4ac520afcdc3dc8ff234d74 716 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 185 309 2.9E-14 T 11-10-2018 IPR000014 PAS domain SYN_00715 2b6191d6c4ac520afcdc3dc8ff234d74 716 SUPERFAMILY SSF55785 300 418 2.09E-21 T 11-10-2018 IPR035965 PAS domain superfamily SYN_00715 2b6191d6c4ac520afcdc3dc8ff234d74 716 SUPERFAMILY SSF55785 68 147 6.81E-12 T 11-10-2018 IPR035965 PAS domain superfamily SYN_00715 2b6191d6c4ac520afcdc3dc8ff234d74 716 SUPERFAMILY SSF46894 646 705 1.84E-11 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SYN_00715 2b6191d6c4ac520afcdc3dc8ff234d74 716 Gene3D G3DSA:3.30.450.20 56 182 1.9E-10 T 11-10-2018 SYN_00715 2b6191d6c4ac520afcdc3dc8ff234d74 716 SMART SM00086 389 431 0.1 T 11-10-2018 IPR001610 PAC motif SYN_00715 2b6191d6c4ac520afcdc3dc8ff234d74 716 SMART SM00086 262 304 0.58 T 11-10-2018 IPR001610 PAC motif SYN_00715 2b6191d6c4ac520afcdc3dc8ff234d74 716 SMART SM00086 516 558 1.5 T 11-10-2018 IPR001610 PAC motif SYN_00715 2b6191d6c4ac520afcdc3dc8ff234d74 716 SUPERFAMILY SSF55785 173 302 9.42E-18 T 11-10-2018 IPR035965 PAS domain superfamily SYN_00715 2b6191d6c4ac520afcdc3dc8ff234d74 716 SMART SM00091 316 383 7.1E-6 T 11-10-2018 IPR000014 PAS domain SYN_00715 2b6191d6c4ac520afcdc3dc8ff234d74 716 SMART SM00091 188 257 1.2 T 11-10-2018 IPR000014 PAS domain SYN_00715 2b6191d6c4ac520afcdc3dc8ff234d74 716 SMART SM00091 443 510 0.0019 T 11-10-2018 IPR000014 PAS domain SYN_00715 2b6191d6c4ac520afcdc3dc8ff234d74 716 SMART SM00091 70 136 0.0039 T 11-10-2018 IPR000014 PAS domain SYN_00715 2b6191d6c4ac520afcdc3dc8ff234d74 716 Gene3D G3DSA:3.30.450.20 187 307 1.5E-16 T 11-10-2018 SYN_00715 2b6191d6c4ac520afcdc3dc8ff234d74 716 Pfam PF13426 PAS domain 331 426 2.0E-10 T 11-10-2018 IPR000014 PAS domain SYN_00715 2b6191d6c4ac520afcdc3dc8ff234d74 716 Pfam PF13426 PAS domain 455 557 1.8E-5 T 11-10-2018 IPR000014 PAS domain SYN_00715 2b6191d6c4ac520afcdc3dc8ff234d74 716 Pfam PF13426 PAS domain 80 174 0.022 T 11-10-2018 IPR000014 PAS domain SYN_00715 2b6191d6c4ac520afcdc3dc8ff234d74 716 SUPERFAMILY SSF55785 429 556 4.71E-20 T 11-10-2018 IPR035965 PAS domain superfamily SYN_02267 f088de5ace52c5ea643c9a6ea15e6403 324 PIRSF PIRSF001415 1 324 2.0E-154 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 SYN_02267 f088de5ace52c5ea643c9a6ea15e6403 324 Gene3D G3DSA:3.20.20.70 2 323 4.3E-151 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_02267 f088de5ace52c5ea643c9a6ea15e6403 324 Pfam PF00490 Delta-aminolevulinic acid dehydratase 6 320 2.8E-153 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 SYN_02267 f088de5ace52c5ea643c9a6ea15e6403 324 SUPERFAMILY SSF51569 2 323 3.37E-144 T 11-10-2018 SYN_02267 f088de5ace52c5ea643c9a6ea15e6403 324 SMART SM01004 3 322 3.4E-240 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 SYN_02267 f088de5ace52c5ea643c9a6ea15e6403 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 189 208 4.4E-61 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 SYN_02267 f088de5ace52c5ea643c9a6ea15e6403 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 296 315 4.4E-61 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 SYN_02267 f088de5ace52c5ea643c9a6ea15e6403 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 121 135 4.4E-61 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 SYN_02267 f088de5ace52c5ea643c9a6ea15e6403 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 151 170 4.4E-61 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 SYN_02267 f088de5ace52c5ea643c9a6ea15e6403 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 266 281 4.4E-61 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 SYN_02267 f088de5ace52c5ea643c9a6ea15e6403 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 241 257 4.4E-61 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 SYN_02267 f088de5ace52c5ea643c9a6ea15e6403 324 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 241 253 - T 11-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 SYN_02713 d61e8c4f9e48311715c6c541981ed865 457 SUPERFAMILY SSF52172 3 184 6.4E-47 T 11-10-2018 IPR011006 CheY-like superfamily SYN_02713 d61e8c4f9e48311715c6c541981ed865 457 Pfam PF00072 Response regulator receiver domain 5 113 2.3E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_02713 d61e8c4f9e48311715c6c541981ed865 457 Gene3D G3DSA:1.10.10.60 401 457 2.0E-18 T 11-10-2018 SYN_02713 d61e8c4f9e48311715c6c541981ed865 457 SUPERFAMILY SSF46689 353 452 2.69E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SYN_02713 d61e8c4f9e48311715c6c541981ed865 457 SUPERFAMILY SSF52540 140 382 3.48E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02713 d61e8c4f9e48311715c6c541981ed865 457 SMART SM00382 160 303 1.4E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_02713 d61e8c4f9e48311715c6c541981ed865 457 Pfam PF00158 Sigma-54 interaction domain 141 306 2.2E-70 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SYN_02713 d61e8c4f9e48311715c6c541981ed865 457 SMART SM00448 3 114 5.6E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_02713 d61e8c4f9e48311715c6c541981ed865 457 Pfam PF02954 Bacterial regulatory protein, Fis family 412 450 2.0E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_02713 d61e8c4f9e48311715c6c541981ed865 457 Gene3D G3DSA:3.40.50.300 126 310 3.9E-65 T 11-10-2018 SYN_02713 d61e8c4f9e48311715c6c541981ed865 457 Gene3D G3DSA:1.10.8.60 311 386 3.4E-25 T 11-10-2018 SYN_02713 d61e8c4f9e48311715c6c541981ed865 457 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site SYN_02713 d61e8c4f9e48311715c6c541981ed865 457 Gene3D G3DSA:3.40.50.2300 3 121 4.9E-39 T 11-10-2018 SYN_02713 d61e8c4f9e48311715c6c541981ed865 457 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SYN_02713 d61e8c4f9e48311715c6c541981ed865 457 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 416 433 2.1E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_02713 d61e8c4f9e48311715c6c541981ed865 457 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 433 453 2.1E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_01242 18e2d37a79c34d81d8a8f002feaade26 428 SUPERFAMILY SSF51735 182 427 1.34E-63 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_01242 18e2d37a79c34d81d8a8f002feaade26 428 Gene3D G3DSA:3.40.50.720 182 428 2.7E-73 T 11-10-2018 SYN_01242 18e2d37a79c34d81d8a8f002feaade26 428 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 93 107 5.6E-34 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 SYN_01242 18e2d37a79c34d81d8a8f002feaade26 428 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 173 195 5.6E-34 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 SYN_01242 18e2d37a79c34d81d8a8f002feaade26 428 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 354 365 5.6E-34 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 SYN_01242 18e2d37a79c34d81d8a8f002feaade26 428 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 215 235 5.6E-34 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 SYN_01242 18e2d37a79c34d81d8a8f002feaade26 428 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 101 114 - T 11-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 SYN_01242 18e2d37a79c34d81d8a8f002feaade26 428 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 37 163 1.8E-50 T 11-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 SYN_01242 18e2d37a79c34d81d8a8f002feaade26 428 SMART SM00839 184 426 5.4E-77 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 SYN_01242 18e2d37a79c34d81d8a8f002feaade26 428 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 182 426 5.4E-63 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 SYN_01242 18e2d37a79c34d81d8a8f002feaade26 428 Gene3D G3DSA:3.40.50.10860 38 181 9.5E-59 T 11-10-2018 SYN_01242 18e2d37a79c34d81d8a8f002feaade26 428 SUPERFAMILY SSF53223 6 184 1.15E-62 T 11-10-2018 SYN_01242 18e2d37a79c34d81d8a8f002feaade26 428 PIRSF PIRSF000185 4 428 2.1E-141 T 11-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 SYN_02900 83986e1957627b980c6ccbcea361c702 247 Gene3D G3DSA:2.60.120.10 56 192 1.3E-25 T 11-10-2018 IPR014710 RmlC-like jelly roll fold SYN_02900 83986e1957627b980c6ccbcea361c702 247 SUPERFAMILY SSF51182 3 182 2.22E-26 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily SYN_00379 c2dc1dd9c60667b4e77c4e7a4ad38b88 190 Pfam PF13401 AAA domain 13 130 3.4E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01779 b74ea728af50f9ae3baa2719541059d3 150 Pfam PF00692 dUTPase 19 147 5.2E-30 T 11-10-2018 IPR029054 dUTPase-like SYN_01779 b74ea728af50f9ae3baa2719541059d3 150 TIGRFAM TIGR00576 dut: dUTP diphosphatase 11 147 8.4E-52 T 11-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 SYN_01779 b74ea728af50f9ae3baa2719541059d3 150 SUPERFAMILY SSF51283 6 148 1.96E-50 T 11-10-2018 IPR036157 dUTPase-like superfamily SYN_01779 b74ea728af50f9ae3baa2719541059d3 150 Gene3D G3DSA:2.70.40.10 4 148 4.3E-52 T 11-10-2018 IPR036157 dUTPase-like superfamily SYN_01779 b74ea728af50f9ae3baa2719541059d3 150 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 4 149 33.801 T 11-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 SYN_00480 b5db36caeeaa94c2fc0223c59b53f1d1 383 SUPERFAMILY SSF47203 229 381 8.54E-53 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 SYN_00480 b5db36caeeaa94c2fc0223c59b53f1d1 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 379 1.1E-42 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SYN_00480 b5db36caeeaa94c2fc0223c59b53f1d1 383 PIRSF PIRSF016578 5 84 0.0015 T 11-10-2018 SYN_00480 b5db36caeeaa94c2fc0223c59b53f1d1 383 PIRSF PIRSF016578 127 383 1.1E-11 T 11-10-2018 SYN_00480 b5db36caeeaa94c2fc0223c59b53f1d1 383 Gene3D G3DSA:2.40.110.10 122 228 7.2E-38 T 11-10-2018 SYN_00480 b5db36caeeaa94c2fc0223c59b53f1d1 383 Gene3D G3DSA:1.20.140.10 231 383 8.8E-49 T 11-10-2018 SYN_00480 b5db36caeeaa94c2fc0223c59b53f1d1 383 SUPERFAMILY SSF56645 1 242 4.71E-75 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 SYN_00480 b5db36caeeaa94c2fc0223c59b53f1d1 383 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 125 137 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 SYN_00480 b5db36caeeaa94c2fc0223c59b53f1d1 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 218 2.9E-22 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 SYN_00480 b5db36caeeaa94c2fc0223c59b53f1d1 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 119 1.4E-33 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 SYN_00480 b5db36caeeaa94c2fc0223c59b53f1d1 383 Gene3D G3DSA:1.10.540.10 1 121 3.8E-37 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 SYN_00776 66a691712ebd3ef1d64bc204441df76d 582 SMART SM00086 268 310 2.5E-4 T 11-10-2018 IPR001610 PAC motif SYN_00776 66a691712ebd3ef1d64bc204441df76d 582 Pfam PF08447 PAS fold 219 300 2.1E-9 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 SYN_00776 66a691712ebd3ef1d64bc204441df76d 582 SMART SM00091 68 135 1.6E-6 T 11-10-2018 IPR000014 PAS domain SYN_00776 66a691712ebd3ef1d64bc204441df76d 582 SMART SM00091 196 262 3.5E-9 T 11-10-2018 IPR000014 PAS domain SYN_00776 66a691712ebd3ef1d64bc204441df76d 582 SUPERFAMILY SSF55874 448 575 8.25E-15 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_00776 66a691712ebd3ef1d64bc204441df76d 582 SUPERFAMILY SSF55785 181 308 5.31E-25 T 11-10-2018 IPR035965 PAS domain superfamily SYN_00776 66a691712ebd3ef1d64bc204441df76d 582 Gene3D G3DSA:3.30.565.10 441 580 2.4E-25 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_00776 66a691712ebd3ef1d64bc204441df76d 582 Pfam PF07730 Histidine kinase 377 440 7.0E-13 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 SYN_00776 66a691712ebd3ef1d64bc204441df76d 582 SUPERFAMILY SSF55785 73 187 2.54E-12 T 11-10-2018 IPR035965 PAS domain superfamily SYN_00776 66a691712ebd3ef1d64bc204441df76d 582 Pfam PF00989 PAS fold 69 148 1.1E-6 T 11-10-2018 IPR013767 PAS fold GO:0006355 SYN_00776 66a691712ebd3ef1d64bc204441df76d 582 SMART SM00387 480 578 1.4E-5 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_00776 66a691712ebd3ef1d64bc204441df76d 582 Gene3D G3DSA:3.30.450.20 187 308 2.4E-23 T 11-10-2018 SYN_00776 66a691712ebd3ef1d64bc204441df76d 582 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 483 576 5.0E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_00776 66a691712ebd3ef1d64bc204441df76d 582 Gene3D G3DSA:3.30.450.20 63 186 8.9E-12 T 11-10-2018 SYN_00776 66a691712ebd3ef1d64bc204441df76d 582 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 192 317 1.1E-19 T 11-10-2018 IPR000014 PAS domain SYN_00776 66a691712ebd3ef1d64bc204441df76d 582 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 68 191 2.5E-8 T 11-10-2018 IPR000014 PAS domain SYN_02186 48553b2245c26e3c804831ab81c87914 404 SMART SM00729 34 251 4.8E-53 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SYN_02186 48553b2245c26e3c804831ab81c87914 404 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 37 369 2.2E-88 T 11-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 SYN_02186 48553b2245c26e3c804831ab81c87914 404 Pfam PF04055 Radical SAM superfamily 40 205 3.7E-20 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_02186 48553b2245c26e3c804831ab81c87914 404 Pfam PF06969 HemN C-terminal domain 331 395 7.8E-11 T 11-10-2018 IPR010723 HemN, C-terminal SYN_02186 48553b2245c26e3c804831ab81c87914 404 SUPERFAMILY SSF102114 31 402 2.75E-113 T 11-10-2018 SYN_02186 48553b2245c26e3c804831ab81c87914 404 Gene3D G3DSA:3.80.30.20 4 329 3.8E-104 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe SYN_00628 274bc952ed505865ad074492fc73c037 287 SUPERFAMILY SSF54862 146 200 1.65E-15 T 11-10-2018 SYN_00628 274bc952ed505865ad074492fc73c037 287 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 176 187 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_00628 274bc952ed505865ad074492fc73c037 287 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 221 232 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_00628 274bc952ed505865ad074492fc73c037 287 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 14 100 7.1E-20 T 11-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 SYN_00628 274bc952ed505865ad074492fc73c037 287 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 9 198 25.884 T 11-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 SYN_00628 274bc952ed505865ad074492fc73c037 287 Pfam PF00037 4Fe-4S binding domain 169 192 8.5E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_00628 274bc952ed505865ad074492fc73c037 287 Pfam PF04060 Putative Fe-S cluster 49 82 4.2E-10 T 11-10-2018 IPR007202 4Fe-4S domain GO:0051536 SYN_00628 274bc952ed505865ad074492fc73c037 287 SUPERFAMILY SSF54862 170 270 8.37E-12 T 11-10-2018 SYN_00628 274bc952ed505865ad074492fc73c037 287 Gene3D G3DSA:3.20.20.20 40 104 2.5E-7 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SYN_00628 274bc952ed505865ad074492fc73c037 287 Gene3D G3DSA:3.30.70.20 142 196 1.3E-14 T 11-10-2018 SYN_00628 274bc952ed505865ad074492fc73c037 287 Gene3D G3DSA:3.30.70.20 211 278 5.6E-8 T 11-10-2018 SYN_00752 9885522de288d14e7163a401cf102169 108 Pfam PF01985 CRS1 / YhbY (CRM) domain 14 97 2.0E-20 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 SYN_00752 9885522de288d14e7163a401cf102169 108 SUPERFAMILY SSF75471 13 104 2.75E-28 T 11-10-2018 IPR035920 YhbY-like superfamily SYN_00752 9885522de288d14e7163a401cf102169 108 Gene3D G3DSA:3.30.110.60 13 108 9.0E-32 T 11-10-2018 IPR035920 YhbY-like superfamily SYN_00752 9885522de288d14e7163a401cf102169 108 SMART SM01103 14 97 4.0E-38 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 SYN_00752 9885522de288d14e7163a401cf102169 108 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 20 107 1.0E-27 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 SYN_00752 9885522de288d14e7163a401cf102169 108 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 14 107 1.1E-25 T 11-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 SYN_00796 7034c8f2144ff74339c577f43ab785cc 240 SUPERFAMILY SSF54768 119 232 2.51E-23 T 11-10-2018 SYN_00796 7034c8f2144ff74339c577f43ab785cc 240 SUPERFAMILY SSF69065 4 168 4.88E-48 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 SYN_00796 7034c8f2144ff74339c577f43ab785cc 240 Gene3D G3DSA:1.10.1520.10 5 158 7.4E-46 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 SYN_00796 7034c8f2144ff74339c577f43ab785cc 240 SMART SM00358 166 233 1.5E-19 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain SYN_00796 7034c8f2144ff74339c577f43ab785cc 240 Pfam PF14622 Ribonuclease-III-like 23 150 5.1E-36 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 SYN_00796 7034c8f2144ff74339c577f43ab785cc 240 Pfam PF00035 Double-stranded RNA binding motif 166 232 1.1E-11 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain SYN_00796 7034c8f2144ff74339c577f43ab785cc 240 ProSitePatterns PS00517 Ribonuclease III family signature. 48 56 - T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 SYN_00796 7034c8f2144ff74339c577f43ab785cc 240 SMART SM00535 24 159 3.0E-54 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 SYN_00796 7034c8f2144ff74339c577f43ab785cc 240 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 13 231 2.9E-75 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 SYN_00796 7034c8f2144ff74339c577f43ab785cc 240 Gene3D G3DSA:3.30.160.20 164 234 1.0E-20 T 11-10-2018 SYN_00796 7034c8f2144ff74339c577f43ab785cc 240 Hamap MF_00104 Ribonuclease 3 [rnc]. 12 229 30.225 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 SYN_00126 b5c9c140e5cca40e27ee38a065a79b90 404 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 21 368 2.8E-115 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 SYN_00126 b5c9c140e5cca40e27ee38a065a79b90 404 SMART SM00382 147 272 2.0E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00126 b5c9c140e5cca40e27ee38a065a79b90 404 Gene3D G3DSA:3.40.50.300 126 383 8.0E-90 T 11-10-2018 SYN_00126 b5c9c140e5cca40e27ee38a065a79b90 404 Pfam PF00437 Type II/IV secretion system protein 94 286 1.1E-42 T 11-10-2018 IPR001482 Type II/IV secretion system protein SYN_00126 b5c9c140e5cca40e27ee38a065a79b90 404 SUPERFAMILY SSF52540 92 362 5.49E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00126 b5c9c140e5cca40e27ee38a065a79b90 404 Gene3D G3DSA:3.30.450.90 11 124 2.0E-19 T 11-10-2018 SYN_01987 95df0d15e50f9ac2593c9f371f6c01bf 402 Gene3D G3DSA:3.40.50.720 1 205 1.3E-38 T 11-10-2018 SYN_01987 95df0d15e50f9ac2593c9f371f6c01bf 402 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 219 240 - T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 SYN_01987 95df0d15e50f9ac2593c9f371f6c01bf 402 PIRSF PIRSF000114 4 369 1.2E-51 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 SYN_01987 95df0d15e50f9ac2593c9f371f6c01bf 402 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 204 228 9.8E-14 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 SYN_01987 95df0d15e50f9ac2593c9f371f6c01bf 402 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 269 286 9.8E-14 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 SYN_01987 95df0d15e50f9ac2593c9f371f6c01bf 402 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 14 31 9.8E-14 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 SYN_01987 95df0d15e50f9ac2593c9f371f6c01bf 402 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 229 253 9.8E-14 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 SYN_01987 95df0d15e50f9ac2593c9f371f6c01bf 402 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 76 103 9.8E-14 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 SYN_01987 95df0d15e50f9ac2593c9f371f6c01bf 402 Gene3D G3DSA:1.10.1040.10 220 370 3.1E-28 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SYN_01987 95df0d15e50f9ac2593c9f371f6c01bf 402 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 211 354 5.1E-32 T 11-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 SYN_01987 95df0d15e50f9ac2593c9f371f6c01bf 402 SUPERFAMILY SSF51735 10 197 9.02E-22 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_01987 95df0d15e50f9ac2593c9f371f6c01bf 402 SUPERFAMILY SSF48179 211 361 6.8E-29 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 SYN_01987 95df0d15e50f9ac2593c9f371f6c01bf 402 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 12 185 6.0E-16 T 11-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 SYN_00100 a04a0d23d0d9e4eba1228968249f1501 196 SUPERFAMILY SSF55729 28 177 1.05E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase SYN_00100 a04a0d23d0d9e4eba1228968249f1501 196 Pfam PF00583 Acetyltransferase (GNAT) family 82 168 6.4E-14 T 11-10-2018 IPR000182 GNAT domain SYN_00100 a04a0d23d0d9e4eba1228968249f1501 196 Gene3D G3DSA:3.40.630.30 19 196 1.5E-40 T 11-10-2018 SYN_02399 45a19283b0bc585d2f943ad1953bd9a1 578 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 8 576 31.529 T 11-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 SYN_02399 45a19283b0bc585d2f943ad1953bd9a1 578 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 429 558 1.3E-10 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SYN_02399 45a19283b0bc585d2f943ad1953bd9a1 578 Gene3D G3DSA:3.40.50.970 6 187 2.0E-55 T 11-10-2018 SYN_02399 45a19283b0bc585d2f943ad1953bd9a1 578 PIRSF PIRSF004983 6 575 2.6E-138 T 11-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 SYN_02399 45a19283b0bc585d2f943ad1953bd9a1 578 Pfam PF16582 Middle domain of thiamine pyrophosphate 226 407 1.4E-16 T 11-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 SYN_02399 45a19283b0bc585d2f943ad1953bd9a1 578 Gene3D G3DSA:3.40.50.1220 212 381 1.3E-23 T 11-10-2018 SYN_02399 45a19283b0bc585d2f943ad1953bd9a1 578 SUPERFAMILY SSF52518 383 566 4.61E-26 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold SYN_02399 45a19283b0bc585d2f943ad1953bd9a1 578 SUPERFAMILY SSF52518 5 183 7.85E-34 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold SYN_02399 45a19283b0bc585d2f943ad1953bd9a1 578 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 14 170 4.4E-27 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SYN_02399 45a19283b0bc585d2f943ad1953bd9a1 578 SUPERFAMILY SSF52467 215 352 2.41E-6 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily SYN_02399 45a19283b0bc585d2f943ad1953bd9a1 578 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 14 451 3.9E-117 T 11-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 SYN_02399 45a19283b0bc585d2f943ad1953bd9a1 578 Gene3D G3DSA:3.40.50.970 390 576 9.7E-59 T 11-10-2018 SYN_02627 c250ba20c66fe0d2b8718f7f1b35a3ca 277 Gene3D G3DSA:3.30.70.1020 109 187 7.3E-37 T 11-10-2018 SYN_02627 c250ba20c66fe0d2b8718f7f1b35a3ca 277 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 29 227 9.5E-16 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 SYN_02627 c250ba20c66fe0d2b8718f7f1b35a3ca 277 Pfam PF02358 Trehalose-phosphatase 31 248 1.2E-30 T 11-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 SYN_02627 c250ba20c66fe0d2b8718f7f1b35a3ca 277 Gene3D G3DSA:3.40.50.1000 29 242 7.3E-37 T 11-10-2018 IPR023214 HAD superfamily SYN_02627 c250ba20c66fe0d2b8718f7f1b35a3ca 277 SUPERFAMILY SSF56784 29 260 1.77E-27 T 11-10-2018 IPR036412 HAD-like superfamily SYN_02627 c250ba20c66fe0d2b8718f7f1b35a3ca 277 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 30 257 3.9E-28 T 11-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 SYN_02417 24651c1f568932173a67923b3cfe0bc9 531 Pfam PF13193 AMP-binding enzyme C-terminal domain 446 524 7.4E-24 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain SYN_02417 24651c1f568932173a67923b3cfe0bc9 531 SUPERFAMILY SSF56801 34 531 1.18E-132 T 11-10-2018 SYN_02417 24651c1f568932173a67923b3cfe0bc9 531 Gene3D G3DSA:3.30.300.310 433 531 1.5E-28 T 11-10-2018 SYN_02417 24651c1f568932173a67923b3cfe0bc9 531 Gene3D G3DSA:3.40.50.12780 32 430 4.0E-97 T 11-10-2018 SYN_02417 24651c1f568932173a67923b3cfe0bc9 531 Pfam PF00501 AMP-binding enzyme 52 437 2.4E-75 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 SYN_02417 24651c1f568932173a67923b3cfe0bc9 531 ProSitePatterns PS00455 Putative AMP-binding domain signature. 196 207 - T 11-10-2018 IPR020845 AMP-binding, conserved site SYN_01728 aa3a9a7fdaf6484b39b165b3d71e145e 89 SUPERFAMILY SSF55594 4 88 5.5E-26 T 11-10-2018 IPR035895 HPr-like superfamily SYN_01728 aa3a9a7fdaf6484b39b165b3d71e145e 89 Gene3D G3DSA:3.30.1340.10 4 89 1.5E-29 T 11-10-2018 IPR035895 HPr-like superfamily SYN_01728 aa3a9a7fdaf6484b39b165b3d71e145e 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 40 55 - T 11-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site SYN_01728 aa3a9a7fdaf6484b39b165b3d71e145e 89 Pfam PF00381 PTS HPr component phosphorylation site 5 83 3.7E-26 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like SYN_01728 aa3a9a7fdaf6484b39b165b3d71e145e 89 PRINTS PR00107 Phosphocarrier protein signature 14 30 7.7E-16 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like SYN_01728 aa3a9a7fdaf6484b39b165b3d71e145e 89 PRINTS PR00107 Phosphocarrier protein signature 54 71 7.7E-16 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like SYN_01728 aa3a9a7fdaf6484b39b165b3d71e145e 89 PRINTS PR00107 Phosphocarrier protein signature 39 54 7.7E-16 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like SYN_01728 aa3a9a7fdaf6484b39b165b3d71e145e 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 5 83 1.6E-26 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like SYN_01635 97702e47151042bdc3cbc7b6ff918c7c 450 SMART SM00448 4 115 7.5E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_01635 97702e47151042bdc3cbc7b6ff918c7c 450 SUPERFAMILY SSF52540 142 383 3.64E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01635 97702e47151042bdc3cbc7b6ff918c7c 450 Gene3D G3DSA:3.40.50.2300 2 133 1.3E-36 T 11-10-2018 SYN_01635 97702e47151042bdc3cbc7b6ff918c7c 450 SMART SM00382 162 305 8.9E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01635 97702e47151042bdc3cbc7b6ff918c7c 450 Pfam PF00072 Response regulator receiver domain 6 115 1.2E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_01635 97702e47151042bdc3cbc7b6ff918c7c 450 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 427 447 1.1E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_01635 97702e47151042bdc3cbc7b6ff918c7c 450 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 410 427 1.1E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_01635 97702e47151042bdc3cbc7b6ff918c7c 450 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SYN_01635 97702e47151042bdc3cbc7b6ff918c7c 450 Gene3D G3DSA:1.10.10.60 392 446 2.3E-15 T 11-10-2018 SYN_01635 97702e47151042bdc3cbc7b6ff918c7c 450 Pfam PF02954 Bacterial regulatory protein, Fis family 403 444 1.4E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_01635 97702e47151042bdc3cbc7b6ff918c7c 450 Gene3D G3DSA:3.40.50.300 134 312 4.8E-61 T 11-10-2018 SYN_01635 97702e47151042bdc3cbc7b6ff918c7c 450 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site SYN_01635 97702e47151042bdc3cbc7b6ff918c7c 450 SUPERFAMILY SSF46689 353 446 2.6E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SYN_01635 97702e47151042bdc3cbc7b6ff918c7c 450 Gene3D G3DSA:1.10.8.60 313 379 2.0E-21 T 11-10-2018 SYN_01635 97702e47151042bdc3cbc7b6ff918c7c 450 SUPERFAMILY SSF52172 3 186 1.85E-41 T 11-10-2018 IPR011006 CheY-like superfamily SYN_01635 97702e47151042bdc3cbc7b6ff918c7c 450 Pfam PF00158 Sigma-54 interaction domain 142 308 2.3E-64 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SYN_02382 608e7923a144492953d536f1551d8705 453 Gene3D G3DSA:3.40.50.720 206 378 3.5E-165 T 11-10-2018 SYN_02382 608e7923a144492953d536f1551d8705 453 PIRSF PIRSF000185 19 453 4.3E-116 T 11-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 SYN_02382 608e7923a144492953d536f1551d8705 453 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 199 450 3.8E-85 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 SYN_02382 608e7923a144492953d536f1551d8705 453 Gene3D G3DSA:1.10.285.10 402 453 4.0E-8 T 11-10-2018 SYN_02382 608e7923a144492953d536f1551d8705 453 SUPERFAMILY SSF51735 199 452 1.89E-73 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_02382 608e7923a144492953d536f1551d8705 453 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 54 181 3.6E-51 T 11-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 SYN_02382 608e7923a144492953d536f1551d8705 453 SMART SM00839 201 451 4.0E-87 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 SYN_02382 608e7923a144492953d536f1551d8705 453 Gene3D G3DSA:3.40.50.10860 52 187 3.5E-165 T 11-10-2018 SYN_02382 608e7923a144492953d536f1551d8705 453 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 119 132 - T 11-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 SYN_02382 608e7923a144492953d536f1551d8705 453 SUPERFAMILY SSF53223 4 193 7.36E-73 T 11-10-2018 SYN_02382 608e7923a144492953d536f1551d8705 453 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 190 212 7.3E-31 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 SYN_02382 608e7923a144492953d536f1551d8705 453 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 111 125 7.3E-31 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 SYN_02382 608e7923a144492953d536f1551d8705 453 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 377 388 7.3E-31 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 SYN_02382 608e7923a144492953d536f1551d8705 453 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 232 252 7.3E-31 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 SYN_02382 608e7923a144492953d536f1551d8705 453 Gene3D G3DSA:1.10.285.10 5 389 3.5E-165 T 11-10-2018 SYN_02478 e93446f3897b70ae31673f12741307bf 835 Gene3D G3DSA:1.10.3210.30 14 198 1.2E-15 T 11-10-2018 IPR038257 CRISPR-associated Cas3-type HD domain superfamily SYN_02478 e93446f3897b70ae31673f12741307bf 835 SUPERFAMILY SSF52540 296 629 2.42E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02478 e93446f3897b70ae31673f12741307bf 835 SMART SM00490 537 619 0.0086 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_02478 e93446f3897b70ae31673f12741307bf 835 Gene3D G3DSA:3.40.50.300 503 657 2.2E-12 T 11-10-2018 SYN_02478 e93446f3897b70ae31673f12741307bf 835 Pfam PF00271 Helicase conserved C-terminal domain 517 619 3.8E-5 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_02478 e93446f3897b70ae31673f12741307bf 835 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 28 240 3.5E-31 T 11-10-2018 IPR006483 CRISPR-associated Cas3-type HD domain SYN_02478 e93446f3897b70ae31673f12741307bf 835 Pfam PF00270 DEAD/DEAH box helicase 301 462 5.1E-9 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SYN_02478 e93446f3897b70ae31673f12741307bf 835 SMART SM00487 275 497 0.0036 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain SYN_02478 e93446f3897b70ae31673f12741307bf 835 Gene3D G3DSA:3.40.50.300 261 475 7.3E-13 T 11-10-2018 SYN_02478 e93446f3897b70ae31673f12741307bf 835 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 302 638 9.3E-36 T 11-10-2018 IPR006474 Helicase Cas3, CRISPR-associated, core SYN_02134 2b812c782a7005dc3fa318bc4aad757d 351 SMART SM00876 239 338 0.0062 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 SYN_02134 2b812c782a7005dc3fa318bc4aad757d 351 SMART SM00729 65 272 1.5E-21 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SYN_02134 2b812c782a7005dc3fa318bc4aad757d 351 Pfam PF04055 Radical SAM superfamily 69 221 5.2E-11 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_02134 2b812c782a7005dc3fa318bc4aad757d 351 SUPERFAMILY SSF102114 30 312 1.07E-47 T 11-10-2018 SYN_02134 2b812c782a7005dc3fa318bc4aad757d 351 TIGRFAM TIGR03956 rSAM_HydE: [FeFe] hydrogenase H-cluster radical SAM maturase HydE 21 347 1.3E-99 T 11-10-2018 IPR024021 [FeFe]-hydrogenase maturation HydE, radical SAM SYN_02134 2b812c782a7005dc3fa318bc4aad757d 351 PIRSF PIRSF004762 1 340 3.8E-67 T 11-10-2018 SYN_02134 2b812c782a7005dc3fa318bc4aad757d 351 Gene3D G3DSA:3.20.20.70 9 350 3.7E-110 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_02024 beb2fd9a4dd210c1184000741ef2252d 698 Gene3D G3DSA:2.30.42.10 249 336 2.2E-12 T 11-10-2018 SYN_02024 beb2fd9a4dd210c1184000741ef2252d 698 Gene3D G3DSA:3.90.226.10 338 579 3.1E-48 T 11-10-2018 SYN_02024 beb2fd9a4dd210c1184000741ef2252d 698 SMART SM00245 340 564 3.5E-35 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 SYN_02024 beb2fd9a4dd210c1184000741ef2252d 698 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 252 334 4.3E-10 T 11-10-2018 IPR001478 PDZ domain GO:0005515 SYN_02024 beb2fd9a4dd210c1184000741ef2252d 698 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 213 566 2.4E-78 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 SYN_02024 beb2fd9a4dd210c1184000741ef2252d 698 SMART SM00228 260 337 5.5E-11 T 11-10-2018 IPR001478 PDZ domain GO:0005515 SYN_02024 beb2fd9a4dd210c1184000741ef2252d 698 Pfam PF03572 Peptidase family S41 375 561 8.7E-41 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 SYN_02024 beb2fd9a4dd210c1184000741ef2252d 698 SUPERFAMILY SSF50156 232 355 8.42E-16 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 SYN_02024 beb2fd9a4dd210c1184000741ef2252d 698 SUPERFAMILY SSF52096 211 570 2.49E-55 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily SYN_01747 9d60581d6f6ecb9e05383b0b1fcadd78 480 Pfam PF02875 Mur ligase family, glutamate ligase domain 326 411 2.7E-23 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 SYN_01747 9d60581d6f6ecb9e05383b0b1fcadd78 480 Pfam PF01225 Mur ligase family, catalytic domain 24 121 8.0E-27 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 SYN_01747 9d60581d6f6ecb9e05383b0b1fcadd78 480 SUPERFAMILY SSF53244 325 469 9.29E-48 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 SYN_01747 9d60581d6f6ecb9e05383b0b1fcadd78 480 Gene3D G3DSA:3.90.190.20 324 479 5.9E-53 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 SYN_01747 9d60581d6f6ecb9e05383b0b1fcadd78 480 Gene3D G3DSA:3.40.50.720 23 109 3.5E-33 T 11-10-2018 SYN_01747 9d60581d6f6ecb9e05383b0b1fcadd78 480 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 24 465 5.4E-167 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SYN_01747 9d60581d6f6ecb9e05383b0b1fcadd78 480 Pfam PF08245 Mur ligase middle domain 127 306 3.4E-30 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 SYN_01747 9d60581d6f6ecb9e05383b0b1fcadd78 480 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 22 473 42.471 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SYN_01747 9d60581d6f6ecb9e05383b0b1fcadd78 480 SUPERFAMILY SSF51984 23 109 9.03E-30 T 11-10-2018 SYN_01747 9d60581d6f6ecb9e05383b0b1fcadd78 480 SUPERFAMILY SSF53623 108 323 3.01E-66 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 SYN_01747 9d60581d6f6ecb9e05383b0b1fcadd78 480 Gene3D G3DSA:3.40.1190.10 111 323 1.8E-73 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 SYN_01827 0855789ad51800ad37006d7ff3101bb8 1090 Pfam PF00271 Helicase conserved C-terminal domain 695 835 5.9E-11 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_01827 0855789ad51800ad37006d7ff3101bb8 1090 Pfam PF00176 SNF2 family N-terminal domain 265 415 4.2E-12 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 SYN_01827 0855789ad51800ad37006d7ff3101bb8 1090 SUPERFAMILY SSF52540 297 858 2.38E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01827 0855789ad51800ad37006d7ff3101bb8 1090 Gene3D G3DSA:3.40.50.300 662 865 2.9E-27 T 11-10-2018 SYN_01827 0855789ad51800ad37006d7ff3101bb8 1090 Gene3D G3DSA:3.40.50.10810 249 518 1.4E-25 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily SYN_01827 0855789ad51800ad37006d7ff3101bb8 1090 SMART SM00487 247 434 1.8E-9 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain SYN_01827 0855789ad51800ad37006d7ff3101bb8 1090 SMART SM00490 754 835 4.1E-6 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_00084 0e5e95c90dc9a41e0c4ab6019039b8f4 160 Gene3D G3DSA:3.40.50.360 1 160 5.2E-46 T 11-10-2018 IPR029039 Flavoprotein-like superfamily SYN_00084 0e5e95c90dc9a41e0c4ab6019039b8f4 160 Pfam PF03358 NADPH-dependent FMN reductase 43 121 7.2E-13 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 SYN_00084 0e5e95c90dc9a41e0c4ab6019039b8f4 160 SUPERFAMILY SSF52218 1 159 2.88E-37 T 11-10-2018 IPR029039 Flavoprotein-like superfamily SYN_00818 74d18eeda57d9ba9bd1b0bc37fa5b0bd 332 SUPERFAMILY SSF53756 21 327 3.57E-67 T 11-10-2018 SYN_00818 74d18eeda57d9ba9bd1b0bc37fa5b0bd 332 Gene3D G3DSA:3.40.50.2000 142 309 6.3E-58 T 11-10-2018 SYN_00818 74d18eeda57d9ba9bd1b0bc37fa5b0bd 332 Gene3D G3DSA:3.40.50.2000 29 321 6.3E-58 T 11-10-2018 SYN_00818 74d18eeda57d9ba9bd1b0bc37fa5b0bd 332 Pfam PF00534 Glycosyl transferases group 1 206 303 8.5E-27 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 SYN_00818 74d18eeda57d9ba9bd1b0bc37fa5b0bd 332 Pfam PF13439 Glycosyltransferase Family 4 24 145 1.8E-16 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 SYN_01916 14e181ca64b39f88261a6df1feda146c 420 Gene3D G3DSA:1.10.150.130 103 220 1.9E-34 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal SYN_01916 14e181ca64b39f88261a6df1feda146c 420 Pfam PF13356 Arm DNA-binding domain 18 102 2.1E-18 T 11-10-2018 IPR025166 Integrase, DNA-binding domain SYN_01916 14e181ca64b39f88261a6df1feda146c 420 Pfam PF00589 Phage integrase family 223 358 9.7E-15 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SYN_01916 14e181ca64b39f88261a6df1feda146c 420 SUPERFAMILY SSF56349 113 397 5.89E-61 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SYN_01916 14e181ca64b39f88261a6df1feda146c 420 Gene3D G3DSA:1.10.443.10 222 398 1.8E-12 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 SYN_01916 14e181ca64b39f88261a6df1feda146c 420 Gene3D G3DSA:3.30.160.390 16 102 1.4E-34 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily SYN_02201 c8ae4a0461eb62249223b4444827a975 1172 Gene3D G3DSA:4.10.780.10 629 666 9.7E-9 T 11-10-2018 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily SYN_02201 c8ae4a0461eb62249223b4444827a975 1172 SUPERFAMILY SSF54862 669 759 3.56E-18 T 11-10-2018 SYN_02201 c8ae4a0461eb62249223b4444827a975 1172 Gene3D G3DSA:3.40.50.970 784 1172 4.8E-168 T 11-10-2018 SYN_02201 c8ae4a0461eb62249223b4444827a975 1172 Pfam PF10371 Domain of unknown function 631 676 1.6E-19 T 11-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 SYN_02201 c8ae4a0461eb62249223b4444827a975 1172 Gene3D G3DSA:3.40.50.920 259 414 2.1E-55 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 SYN_02201 c8ae4a0461eb62249223b4444827a975 1172 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 269 372 5.7E-12 T 11-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II SYN_02201 c8ae4a0461eb62249223b4444827a975 1172 Gene3D G3DSA:3.30.70.20 667 783 2.6E-44 T 11-10-2018 SYN_02201 c8ae4a0461eb62249223b4444827a975 1172 PIRSF PIRSF000159 1 1172 0.0 T 11-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 SYN_02201 c8ae4a0461eb62249223b4444827a975 1172 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 16 248 8.6E-72 T 11-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 SYN_02201 c8ae4a0461eb62249223b4444827a975 1172 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 425 608 2.0E-28 T 11-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SYN_02201 c8ae4a0461eb62249223b4444827a975 1172 Gene3D G3DSA:3.40.920.10 415 625 1.0E-87 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 SYN_02201 c8ae4a0461eb62249223b4444827a975 1172 Gene3D G3DSA:3.40.50.970 4 258 1.3E-104 T 11-10-2018 SYN_02201 c8ae4a0461eb62249223b4444827a975 1172 SUPERFAMILY SSF52922 259 413 5.02E-43 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 SYN_02201 c8ae4a0461eb62249223b4444827a975 1172 SUPERFAMILY SSF52518 785 1170 5.24E-127 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold SYN_02201 c8ae4a0461eb62249223b4444827a975 1172 SMART SM00890 622 677 1.8E-24 T 11-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 SYN_02201 c8ae4a0461eb62249223b4444827a975 1172 Pfam PF13484 4Fe-4S double cluster binding domain 686 755 6.9E-9 T 11-10-2018 SYN_02201 c8ae4a0461eb62249223b4444827a975 1172 SUPERFAMILY SSF52518 6 258 9.12E-70 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold SYN_02201 c8ae4a0461eb62249223b4444827a975 1172 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 959 1071 8.5E-9 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SYN_02201 c8ae4a0461eb62249223b4444827a975 1172 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 743 754 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_02201 c8ae4a0461eb62249223b4444827a975 1172 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 6 1170 0.0 T 11-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 SYN_02201 c8ae4a0461eb62249223b4444827a975 1172 SUPERFAMILY SSF53323 416 666 2.48E-82 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 SYN_02520 87cdc759df6f74fd68fff992fc6d2910 153 SMART SM00881 30 122 3.3E-25 T 11-10-2018 IPR003781 CoA-binding GO:0048037 SYN_02520 87cdc759df6f74fd68fff992fc6d2910 153 Gene3D G3DSA:3.40.50.720 19 153 7.0E-45 T 11-10-2018 SYN_02520 87cdc759df6f74fd68fff992fc6d2910 153 SUPERFAMILY SSF51735 25 149 2.36E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_02520 87cdc759df6f74fd68fff992fc6d2910 153 Pfam PF13380 CoA binding domain 34 148 3.1E-42 T 11-10-2018 IPR003781 CoA-binding GO:0048037 SYN_00836 587a9c0ea4d879e0f0ffc3ac1b11c187 284 SUPERFAMILY SSF53850 40 263 7.25E-27 T 11-10-2018 SYN_00836 587a9c0ea4d879e0f0ffc3ac1b11c187 284 Pfam PF12849 PBP superfamily domain 42 250 2.8E-20 T 11-10-2018 IPR024370 PBP domain SYN_00836 587a9c0ea4d879e0f0ffc3ac1b11c187 284 Gene3D G3DSA:3.40.190.10 31 257 1.4E-83 T 11-10-2018 SYN_00836 587a9c0ea4d879e0f0ffc3ac1b11c187 284 Gene3D G3DSA:3.40.190.10 106 221 1.4E-83 T 11-10-2018 SYN_02187 03b8cc047e80f9450a0dab09f1ff0521 598 Pfam PF03144 Elongation factor Tu domain 2 205 275 7.6E-13 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 SYN_02187 03b8cc047e80f9450a0dab09f1ff0521 598 Pfam PF14492 Elongation Factor G, domain II 292 363 2.7E-7 T 11-10-2018 SYN_02187 03b8cc047e80f9450a0dab09f1ff0521 598 Gene3D G3DSA:2.40.30.10 186 285 2.8E-31 T 11-10-2018 SYN_02187 03b8cc047e80f9450a0dab09f1ff0521 598 SUPERFAMILY SSF52540 2 230 1.83E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02187 03b8cc047e80f9450a0dab09f1ff0521 598 Gene3D G3DSA:3.30.70.2570 480 554 1.8E-31 T 11-10-2018 IPR038363 LepA, C-terminal domain superfamily SYN_02187 03b8cc047e80f9450a0dab09f1ff0521 598 Pfam PF00009 Elongation factor Tu GTP binding domain 3 181 8.9E-55 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_02187 03b8cc047e80f9450a0dab09f1ff0521 598 Hamap MF_00071 Elongation factor 4 [lepA]. 1 598 277.84 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 SYN_02187 03b8cc047e80f9450a0dab09f1ff0521 598 SUPERFAMILY SSF54980 292 370 4.32E-17 T 11-10-2018 IPR035647 EF-G domain III/V-like SYN_02187 03b8cc047e80f9450a0dab09f1ff0521 598 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site SYN_02187 03b8cc047e80f9450a0dab09f1ff0521 598 Gene3D G3DSA:3.30.70.870 286 367 8.7E-34 T 11-10-2018 SYN_02187 03b8cc047e80f9450a0dab09f1ff0521 598 Pfam PF06421 GTP-binding protein LepA C-terminus 488 594 3.2E-48 T 11-10-2018 IPR013842 GTP-binding protein LepA, C-terminal SYN_02187 03b8cc047e80f9450a0dab09f1ff0521 598 Gene3D G3DSA:3.40.50.300 1 185 3.0E-72 T 11-10-2018 SYN_02187 03b8cc047e80f9450a0dab09f1ff0521 598 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 174 4.2E-19 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 SYN_02187 03b8cc047e80f9450a0dab09f1ff0521 598 Pfam PF00679 Elongation factor G C-terminus 400 485 3.6E-18 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like SYN_02187 03b8cc047e80f9450a0dab09f1ff0521 598 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.6E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_02187 03b8cc047e80f9450a0dab09f1ff0521 598 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.6E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_02187 03b8cc047e80f9450a0dab09f1ff0521 598 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.6E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_02187 03b8cc047e80f9450a0dab09f1ff0521 598 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.6E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_02187 03b8cc047e80f9450a0dab09f1ff0521 598 SUPERFAMILY SSF54980 401 494 1.77E-22 T 11-10-2018 IPR035647 EF-G domain III/V-like SYN_02187 03b8cc047e80f9450a0dab09f1ff0521 598 Gene3D G3DSA:3.30.70.3380 368 479 5.3E-37 T 11-10-2018 SYN_02187 03b8cc047e80f9450a0dab09f1ff0521 598 TIGRFAM TIGR01393 lepA: elongation factor 4 3 596 1.6E-291 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 SYN_02780 a94d1292a5233af799e8458f8c40142a 157 Gene3D G3DSA:3.40.50.300 2 154 1.6E-41 T 11-10-2018 SYN_02780 a94d1292a5233af799e8458f8c40142a 157 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 130 3.0E-37 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 SYN_02780 a94d1292a5233af799e8458f8c40142a 157 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 13 140 2.1E-34 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 SYN_02780 a94d1292a5233af799e8458f8c40142a 157 SUPERFAMILY SSF52540 23 146 2.31E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02852 e2b6de0c9a4adb9d69a55d9566bcbbe5 1282 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 16 1275 0.0 T 11-10-2018 IPR010222 RNA helicase HrpA GO:0004004 SYN_02852 e2b6de0c9a4adb9d69a55d9566bcbbe5 1282 Gene3D G3DSA:3.40.50.300 2 211 4.5E-78 T 11-10-2018 SYN_02852 e2b6de0c9a4adb9d69a55d9566bcbbe5 1282 Gene3D G3DSA:3.40.50.300 212 382 5.2E-56 T 11-10-2018 SYN_02852 e2b6de0c9a4adb9d69a55d9566bcbbe5 1282 Pfam PF11898 Domain of unknown function (DUF3418) 690 1276 2.4E-148 T 11-10-2018 IPR024590 RNA helicase HrpA, C-terminal SYN_02852 e2b6de0c9a4adb9d69a55d9566bcbbe5 1282 Gene3D G3DSA:1.20.120.1080 411 520 1.7E-13 T 11-10-2018 SYN_02852 e2b6de0c9a4adb9d69a55d9566bcbbe5 1282 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 601 676 8.6E-14 T 11-10-2018 IPR011709 Domain of unknown function DUF1605 SYN_02852 e2b6de0c9a4adb9d69a55d9566bcbbe5 1282 SMART SM00847 425 529 1.1E-30 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 SYN_02852 e2b6de0c9a4adb9d69a55d9566bcbbe5 1282 Pfam PF04408 Helicase associated domain (HA2) 428 534 2.8E-13 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 SYN_02852 e2b6de0c9a4adb9d69a55d9566bcbbe5 1282 Pfam PF00271 Helicase conserved C-terminal domain 243 364 4.7E-13 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_02852 e2b6de0c9a4adb9d69a55d9566bcbbe5 1282 SMART SM00490 262 365 9.7E-11 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_02852 e2b6de0c9a4adb9d69a55d9566bcbbe5 1282 SMART SM00382 51 331 0.0045 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_02852 e2b6de0c9a4adb9d69a55d9566bcbbe5 1282 SUPERFAMILY SSF52540 33 569 1.23E-91 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02852 e2b6de0c9a4adb9d69a55d9566bcbbe5 1282 SMART SM00487 34 218 3.5E-24 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain SYN_01255 0b8f194748412d81a754d0bc3c9a7eba 435 Gene3D G3DSA:3.90.1150.10 300 435 7.1E-52 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SYN_01255 0b8f194748412d81a754d0bc3c9a7eba 435 SUPERFAMILY SSF53383 12 432 3.03E-123 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SYN_01255 0b8f194748412d81a754d0bc3c9a7eba 435 Gene3D G3DSA:3.40.640.10 13 296 1.6E-96 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SYN_01255 0b8f194748412d81a754d0bc3c9a7eba 435 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 15 432 6.7E-141 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 SYN_01255 0b8f194748412d81a754d0bc3c9a7eba 435 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 206 220 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 SYN_01255 0b8f194748412d81a754d0bc3c9a7eba 435 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 14 432 7.2E-201 T 11-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 SYN_01255 0b8f194748412d81a754d0bc3c9a7eba 435 PIRSF PIRSF001434 2 435 1.4E-127 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 SYN_01395 3752ebd419fac8a81082d548bcdb714b 259 SUPERFAMILY SSF55120 15 259 6.19E-83 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 SYN_01395 3752ebd419fac8a81082d548bcdb714b 259 Gene3D G3DSA:3.30.70.660 120 258 2.0E-47 T 11-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 SYN_01395 3752ebd419fac8a81082d548bcdb714b 259 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 16 259 35.576 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SYN_01395 3752ebd419fac8a81082d548bcdb714b 259 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 16 254 3.3E-62 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SYN_01395 3752ebd419fac8a81082d548bcdb714b 259 PIRSF PIRSF001430 15 259 5.9E-81 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SYN_01395 3752ebd419fac8a81082d548bcdb714b 259 Gene3D G3DSA:3.30.70.580 14 119 4.3E-36 T 11-10-2018 SYN_01395 3752ebd419fac8a81082d548bcdb714b 259 Pfam PF01416 tRNA pseudouridine synthase 23 117 1.7E-9 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SYN_01395 3752ebd419fac8a81082d548bcdb714b 259 Pfam PF01416 tRNA pseudouridine synthase 157 259 3.4E-29 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SYN_02700 33a55667c86485a70ae018e6ee22cc68 339 Gene3D G3DSA:1.10.150.80 254 338 1.6E-11 T 11-10-2018 SYN_02700 33a55667c86485a70ae018e6ee22cc68 339 SUPERFAMILY SSF47819 255 335 1.31E-12 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 SYN_02700 33a55667c86485a70ae018e6ee22cc68 339 Pfam PF01612 3'-5' exonuclease 58 224 7.1E-37 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 SYN_02700 33a55667c86485a70ae018e6ee22cc68 339 SUPERFAMILY SSF53098 48 250 7.05E-56 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily SYN_02700 33a55667c86485a70ae018e6ee22cc68 339 Pfam PF00570 HRDC domain 270 334 3.0E-12 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 SYN_02700 33a55667c86485a70ae018e6ee22cc68 339 SMART SM00474 56 225 7.6E-35 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 SYN_02700 33a55667c86485a70ae018e6ee22cc68 339 Gene3D G3DSA:3.30.420.500 34 249 5.4E-55 T 11-10-2018 SYN_01466 981b0956b54dc144833454aba632d5b2 473 SMART SM00382 165 308 6.0E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01466 981b0956b54dc144833454aba632d5b2 473 Gene3D G3DSA:1.10.10.60 399 466 5.6E-13 T 11-10-2018 SYN_01466 981b0956b54dc144833454aba632d5b2 473 Gene3D G3DSA:3.40.50.2300 3 134 1.9E-39 T 11-10-2018 SYN_01466 981b0956b54dc144833454aba632d5b2 473 SUPERFAMILY SSF46689 358 466 3.58E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SYN_01466 981b0956b54dc144833454aba632d5b2 473 Pfam PF00072 Response regulator receiver domain 8 114 3.3E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_01466 981b0956b54dc144833454aba632d5b2 473 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 447 467 9.6E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_01466 981b0956b54dc144833454aba632d5b2 473 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 430 447 9.6E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_01466 981b0956b54dc144833454aba632d5b2 473 Gene3D G3DSA:3.40.50.300 135 315 2.0E-63 T 11-10-2018 SYN_01466 981b0956b54dc144833454aba632d5b2 473 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site SYN_01466 981b0956b54dc144833454aba632d5b2 473 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 169 182 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SYN_01466 981b0956b54dc144833454aba632d5b2 473 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 231 246 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SYN_01466 981b0956b54dc144833454aba632d5b2 473 Pfam PF00158 Sigma-54 interaction domain 145 311 1.4E-66 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SYN_01466 981b0956b54dc144833454aba632d5b2 473 Gene3D G3DSA:1.10.8.60 316 393 1.2E-23 T 11-10-2018 SYN_01466 981b0956b54dc144833454aba632d5b2 473 SUPERFAMILY SSF52172 3 188 2.42E-43 T 11-10-2018 IPR011006 CheY-like superfamily SYN_01466 981b0956b54dc144833454aba632d5b2 473 Pfam PF02954 Bacterial regulatory protein, Fis family 424 464 4.5E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_01466 981b0956b54dc144833454aba632d5b2 473 SUPERFAMILY SSF52540 145 386 2.88E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01466 981b0956b54dc144833454aba632d5b2 473 SMART SM00448 6 117 1.2E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_03256 8a50c2d42d43748a8a37bf360a149916 85 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 7 82 23.57 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_03256 8a50c2d42d43748a8a37bf360a149916 85 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 8 75 1.0E-19 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_03256 8a50c2d42d43748a8a37bf360a149916 85 Pfam PF00366 Ribosomal protein S17 12 78 7.0E-30 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_03256 8a50c2d42d43748a8a37bf360a149916 85 SUPERFAMILY SSF50249 8 84 5.57E-31 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_03256 8a50c2d42d43748a8a37bf360a149916 85 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 8 77 3.3E-33 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_03256 8a50c2d42d43748a8a37bf360a149916 85 ProSitePatterns PS00056 Ribosomal protein S17 signature. 58 70 - T 11-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_03256 8a50c2d42d43748a8a37bf360a149916 85 Gene3D G3DSA:2.40.50.140 5 85 4.5E-32 T 11-10-2018 SYN_03256 8a50c2d42d43748a8a37bf360a149916 85 PRINTS PR00973 Ribosomal protein S17 family signature 26 49 3.4E-10 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_03256 8a50c2d42d43748a8a37bf360a149916 85 PRINTS PR00973 Ribosomal protein S17 family signature 58 68 3.4E-10 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_03256 8a50c2d42d43748a8a37bf360a149916 85 PRINTS PR00973 Ribosomal protein S17 family signature 68 75 3.4E-10 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_00916 3f73ff1ba17239ce6c7d6b394f0157be 387 SUPERFAMILY SSF55347 125 263 1.57E-60 T 11-10-2018 SYN_00916 3f73ff1ba17239ce6c7d6b394f0157be 387 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 380 6.6E-157 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 SYN_00916 3f73ff1ba17239ce6c7d6b394f0157be 387 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 131 5.5E-46 T 11-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 SYN_00916 3f73ff1ba17239ce6c7d6b394f0157be 387 Gene3D G3DSA:1.10.1740.10 301 387 8.3E-30 T 11-10-2018 SYN_00916 3f73ff1ba17239ce6c7d6b394f0157be 387 PIRSF PIRSF006205 1 387 1.5E-161 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 SYN_00916 3f73ff1ba17239ce6c7d6b394f0157be 387 Pfam PF13288 DXP reductoisomerase C-terminal domain 260 376 1.7E-41 T 11-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 SYN_00916 3f73ff1ba17239ce6c7d6b394f0157be 387 Gene3D G3DSA:3.40.50.720 1 149 6.5E-55 T 11-10-2018 SYN_00916 3f73ff1ba17239ce6c7d6b394f0157be 387 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 381 47.371 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 SYN_00916 3f73ff1ba17239ce6c7d6b394f0157be 387 SUPERFAMILY SSF69055 291 383 2.22E-31 T 11-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 SYN_00916 3f73ff1ba17239ce6c7d6b394f0157be 387 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 145 228 3.4E-40 T 11-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 SYN_00916 3f73ff1ba17239ce6c7d6b394f0157be 387 SUPERFAMILY SSF51735 2 149 9.09E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_01297 44d4d08d0d5818cfe8b36205365f20c6 132 Pfam PF00313 'Cold-shock' DNA-binding domain 69 130 1.1E-27 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SYN_01297 44d4d08d0d5818cfe8b36205365f20c6 132 SUPERFAMILY SSF50249 65 131 1.52E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_01297 44d4d08d0d5818cfe8b36205365f20c6 132 Gene3D G3DSA:2.40.50.140 67 130 3.8E-28 T 11-10-2018 SYN_01297 44d4d08d0d5818cfe8b36205365f20c6 132 PRINTS PR00050 Cold shock protein signature 70 85 3.1E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SYN_01297 44d4d08d0d5818cfe8b36205365f20c6 132 PRINTS PR00050 Cold shock protein signature 90 99 3.1E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SYN_01297 44d4d08d0d5818cfe8b36205365f20c6 132 PRINTS PR00050 Cold shock protein signature 105 123 3.1E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SYN_01297 44d4d08d0d5818cfe8b36205365f20c6 132 ProSitePatterns PS00352 'Cold-shock' domain signature. 81 99 - T 11-10-2018 IPR019844 Cold-shock conserved site SYN_01297 44d4d08d0d5818cfe8b36205365f20c6 132 SMART SM00357 69 132 8.8E-28 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 SYN_00297 0d72780e95d95951bf90a21822f3cb8b 251 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 15 249 31.445 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 SYN_00297 0d72780e95d95951bf90a21822f3cb8b 251 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 35 50 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 SYN_00297 0d72780e95d95951bf90a21822f3cb8b 251 Pfam PF01209 ubiE/COQ5 methyltransferase family 23 249 1.9E-55 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 SYN_00297 0d72780e95d95951bf90a21822f3cb8b 251 Gene3D G3DSA:3.40.50.150 30 250 6.8E-55 T 11-10-2018 SYN_00297 0d72780e95d95951bf90a21822f3cb8b 251 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 24 249 1.1E-69 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 SYN_00297 0d72780e95d95951bf90a21822f3cb8b 251 SUPERFAMILY SSF53335 18 241 1.86E-38 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_01092 5a8b4bdd9a11bb0f8b00067ec5b49f7d 217 Pfam PF02080 TrkA-C domain 151 216 4.3E-11 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SYN_01092 5a8b4bdd9a11bb0f8b00067ec5b49f7d 217 Gene3D G3DSA:3.40.50.720 2 138 8.5E-33 T 11-10-2018 SYN_01092 5a8b4bdd9a11bb0f8b00067ec5b49f7d 217 Gene3D G3DSA:3.30.70.1450 139 217 5.2E-23 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 SYN_01092 5a8b4bdd9a11bb0f8b00067ec5b49f7d 217 SUPERFAMILY SSF51735 4 137 6.97E-28 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_01092 5a8b4bdd9a11bb0f8b00067ec5b49f7d 217 SUPERFAMILY SSF116726 133 216 3.92E-16 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 SYN_01092 5a8b4bdd9a11bb0f8b00067ec5b49f7d 217 Pfam PF02254 TrkA-N domain 6 121 5.5E-20 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SYN_00904 763b00d7641a7b2cdc3078130a565642 723 SUPERFAMILY SSF81301 180 393 1.63E-60 T 11-10-2018 SYN_00904 763b00d7641a7b2cdc3078130a565642 723 Gene3D G3DSA:3.10.20.30 383 456 7.5E-33 T 11-10-2018 IPR012675 Beta-grasp domain superfamily SYN_00904 763b00d7641a7b2cdc3078130a565642 723 SUPERFAMILY SSF109604 4 190 1.91E-72 T 11-10-2018 SYN_00904 763b00d7641a7b2cdc3078130a565642 723 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 711 1.6E-237 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 SYN_00904 763b00d7641a7b2cdc3078130a565642 723 SMART SM00954 235 347 5.0E-63 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 SYN_00904 763b00d7641a7b2cdc3078130a565642 723 SUPERFAMILY SSF55021 635 714 1.41E-11 T 11-10-2018 SYN_00904 763b00d7641a7b2cdc3078130a565642 723 Pfam PF13291 ACT domain 635 711 5.5E-17 T 11-10-2018 IPR002912 ACT domain SYN_00904 763b00d7641a7b2cdc3078130a565642 723 Pfam PF13328 HD domain 26 175 1.7E-51 T 11-10-2018 IPR003607 HD/PDEase domain SYN_00904 763b00d7641a7b2cdc3078130a565642 723 SMART SM00471 41 153 7.0E-8 T 11-10-2018 IPR003607 HD/PDEase domain SYN_00904 763b00d7641a7b2cdc3078130a565642 723 Gene3D G3DSA:1.10.3210.10 2 191 4.5E-79 T 11-10-2018 SYN_00904 763b00d7641a7b2cdc3078130a565642 723 Pfam PF04607 Region found in RelA / SpoT proteins 235 346 1.0E-36 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 SYN_00904 763b00d7641a7b2cdc3078130a565642 723 SUPERFAMILY SSF81271 376 448 1.18E-23 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SYN_00904 763b00d7641a7b2cdc3078130a565642 723 Gene3D G3DSA:3.30.460.10 193 327 2.1E-47 T 11-10-2018 SYN_00904 763b00d7641a7b2cdc3078130a565642 723 Gene3D G3DSA:3.30.70.260 635 720 1.7E-20 T 11-10-2018 SYN_00904 763b00d7641a7b2cdc3078130a565642 723 Pfam PF02824 TGS domain 389 448 1.2E-22 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 SYN_03227 72fa3e01edd7643ffdd5a87d39394362 380 Gene3D G3DSA:3.30.470.20 3 218 2.4E-66 T 11-10-2018 SYN_03227 72fa3e01edd7643ffdd5a87d39394362 380 SUPERFAMILY SSF56059 1 218 1.04E-58 T 11-10-2018 SYN_03227 72fa3e01edd7643ffdd5a87d39394362 380 Gene3D G3DSA:3.40.50.261 233 378 4.0E-34 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_03227 72fa3e01edd7643ffdd5a87d39394362 380 SUPERFAMILY SSF52210 232 377 3.53E-31 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_03227 72fa3e01edd7643ffdd5a87d39394362 380 PIRSF PIRSF001554 1 379 1.3E-110 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 SYN_03227 72fa3e01edd7643ffdd5a87d39394362 380 Gene3D G3DSA:3.30.1490.20 21 96 2.4E-66 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 SYN_03227 72fa3e01edd7643ffdd5a87d39394362 380 Pfam PF08442 ATP-grasp domain 2 196 5.1E-54 T 11-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 SYN_03227 72fa3e01edd7643ffdd5a87d39394362 380 Pfam PF00549 CoA-ligase 256 367 1.5E-5 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_00779 285277a450cd9bc8dd741d0cbdfd15dc 275 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 87 272 9.3E-33 T 11-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 SYN_00779 285277a450cd9bc8dd741d0cbdfd15dc 275 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 104 273 9.7E-8 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SYN_00779 285277a450cd9bc8dd741d0cbdfd15dc 275 SUPERFAMILY SSF52540 101 273 3.95E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00779 285277a450cd9bc8dd741d0cbdfd15dc 275 Gene3D G3DSA:3.40.50.300 3 275 1.6E-54 T 11-10-2018 SYN_02531 23fdedb96b8acd2ec51ad5cac9892f63 576 SUPERFAMILY SSF47384 331 407 5.49E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SYN_02531 23fdedb96b8acd2ec51ad5cac9892f63 576 Gene3D G3DSA:1.10.287.130 329 405 7.6E-15 T 11-10-2018 SYN_02531 23fdedb96b8acd2ec51ad5cac9892f63 576 Pfam PF00512 His Kinase A (phospho-acceptor) domain 343 406 5.6E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_02531 23fdedb96b8acd2ec51ad5cac9892f63 576 Pfam PF00989 PAS fold 216 322 3.0E-11 T 11-10-2018 IPR013767 PAS fold GO:0006355 SYN_02531 23fdedb96b8acd2ec51ad5cac9892f63 576 SMART SM00091 213 279 3.3E-7 T 11-10-2018 IPR000014 PAS domain SYN_02531 23fdedb96b8acd2ec51ad5cac9892f63 576 SUPERFAMILY SSF55874 397 558 1.2E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_02531 23fdedb96b8acd2ec51ad5cac9892f63 576 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 215 332 1.7E-14 T 11-10-2018 IPR000014 PAS domain SYN_02531 23fdedb96b8acd2ec51ad5cac9892f63 576 Gene3D G3DSA:3.30.450.20 201 328 1.1E-16 T 11-10-2018 SYN_02531 23fdedb96b8acd2ec51ad5cac9892f63 576 Gene3D G3DSA:3.30.565.10 408 568 7.5E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_02531 23fdedb96b8acd2ec51ad5cac9892f63 576 SMART SM00387 449 560 1.2E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_02531 23fdedb96b8acd2ec51ad5cac9892f63 576 SUPERFAMILY SSF55785 203 320 2.27E-14 T 11-10-2018 IPR035965 PAS domain superfamily SYN_02531 23fdedb96b8acd2ec51ad5cac9892f63 576 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 451 559 7.9E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_02531 23fdedb96b8acd2ec51ad5cac9892f63 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 505 3.4E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_02531 23fdedb96b8acd2ec51ad5cac9892f63 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 509 519 3.4E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_02531 23fdedb96b8acd2ec51ad5cac9892f63 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 520 538 3.4E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_02531 23fdedb96b8acd2ec51ad5cac9892f63 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 544 557 3.4E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_02531 23fdedb96b8acd2ec51ad5cac9892f63 576 SMART SM00388 341 407 8.0E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_00434 1ef0163bacdf36ceb4adce6fa4c468db 523 SMART SM00138 7 277 1.2E-53 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SYN_00434 1ef0163bacdf36ceb4adce6fa4c468db 523 SUPERFAMILY SSF48452 355 486 1.37E-21 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00434 1ef0163bacdf36ceb4adce6fa4c468db 523 SMART SM00028 422 455 0.041 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00434 1ef0163bacdf36ceb4adce6fa4c468db 523 SMART SM00028 354 387 280.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00434 1ef0163bacdf36ceb4adce6fa4c468db 523 SMART SM00028 388 421 39.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00434 1ef0163bacdf36ceb4adce6fa4c468db 523 SMART SM00028 456 489 22.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00434 1ef0163bacdf36ceb4adce6fa4c468db 523 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 7.2E-25 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SYN_00434 1ef0163bacdf36ceb4adce6fa4c468db 523 PRINTS PR00996 Glutamate methyltransferase family signature 144 160 7.2E-25 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SYN_00434 1ef0163bacdf36ceb4adce6fa4c468db 523 PRINTS PR00996 Glutamate methyltransferase family signature 109 129 7.2E-25 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SYN_00434 1ef0163bacdf36ceb4adce6fa4c468db 523 PRINTS PR00996 Glutamate methyltransferase family signature 236 259 7.2E-25 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SYN_00434 1ef0163bacdf36ceb4adce6fa4c468db 523 PRINTS PR00996 Glutamate methyltransferase family signature 217 231 7.2E-25 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SYN_00434 1ef0163bacdf36ceb4adce6fa4c468db 523 SUPERFAMILY SSF53335 76 269 9.34E-43 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_00434 1ef0163bacdf36ceb4adce6fa4c468db 523 Gene3D G3DSA:3.40.50.150 75 279 3.6E-54 T 11-10-2018 SYN_00434 1ef0163bacdf36ceb4adce6fa4c468db 523 Gene3D G3DSA:1.25.40.10 343 487 2.8E-22 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00434 1ef0163bacdf36ceb4adce6fa4c468db 523 Pfam PF01739 CheR methyltransferase, SAM binding domain 77 252 4.3E-50 T 11-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal SYN_00434 1ef0163bacdf36ceb4adce6fa4c468db 523 SUPERFAMILY SSF47757 5 74 1.44E-5 T 11-10-2018 SYN_02351 628e533b9c76b6858a96b35826f6346a 809 Pfam PF04945 YHS domain 13 57 6.3E-16 T 11-10-2018 IPR007029 YHS domain SYN_02351 628e533b9c76b6858a96b35826f6346a 809 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 498 504 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 SYN_02351 628e533b9c76b6858a96b35826f6346a 809 SUPERFAMILY SSF81653 297 394 3.66E-26 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 SYN_02351 628e533b9c76b6858a96b35826f6346a 809 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 642 652 4.5E-27 T 11-10-2018 SYN_02351 628e533b9c76b6858a96b35826f6346a 809 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 718 730 4.5E-27 T 11-10-2018 SYN_02351 628e533b9c76b6858a96b35826f6346a 809 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 620 631 4.5E-27 T 11-10-2018 SYN_02351 628e533b9c76b6858a96b35826f6346a 809 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 496 510 4.5E-27 T 11-10-2018 SYN_02351 628e533b9c76b6858a96b35826f6346a 809 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 695 714 4.5E-27 T 11-10-2018 SYN_02351 628e533b9c76b6858a96b35826f6346a 809 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 344 358 4.5E-27 T 11-10-2018 SYN_02351 628e533b9c76b6858a96b35826f6346a 809 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 202 805 5.4E-180 T 11-10-2018 SYN_02351 628e533b9c76b6858a96b35826f6346a 809 Pfam PF00122 E1-E2 ATPase 294 474 2.1E-54 T 11-10-2018 SYN_02351 628e533b9c76b6858a96b35826f6346a 809 Pfam PF00702 haloacid dehalogenase-like hydrolase 492 708 1.7E-39 T 11-10-2018 SYN_02351 628e533b9c76b6858a96b35826f6346a 809 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 265 773 4.4E-90 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SYN_02351 628e533b9c76b6858a96b35826f6346a 809 SUPERFAMILY SSF56784 494 802 1.21E-59 T 11-10-2018 IPR036412 HAD-like superfamily SYN_02351 628e533b9c76b6858a96b35826f6346a 809 Gene3D G3DSA:3.40.50.1000 477 747 4.6E-91 T 11-10-2018 IPR023214 HAD superfamily SYN_02351 628e533b9c76b6858a96b35826f6346a 809 SMART SM00746 14 51 1.5E-6 T 11-10-2018 IPR011017 TRASH domain SYN_02351 628e533b9c76b6858a96b35826f6346a 809 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 261 804 1.6E-116 T 11-10-2018 SYN_02351 628e533b9c76b6858a96b35826f6346a 809 Gene3D G3DSA:2.70.150.20 287 399 2.1E-42 T 11-10-2018 SYN_02351 628e533b9c76b6858a96b35826f6346a 809 SUPERFAMILY SSF81665 261 777 1.57E-14 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 SYN_02351 628e533b9c76b6858a96b35826f6346a 809 Gene3D G3DSA:1.10.620.20 3 64 6.7E-7 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 SYN_02351 628e533b9c76b6858a96b35826f6346a 809 SUPERFAMILY SSF47240 11 56 2.97E-6 T 11-10-2018 IPR009078 Ferritin-like superfamily SYN_02351 628e533b9c76b6858a96b35826f6346a 809 PRINTS PR00943 Copper-transporting ATPase signature 479 494 1.0E-10 T 11-10-2018 SYN_02351 628e533b9c76b6858a96b35826f6346a 809 PRINTS PR00943 Copper-transporting ATPase signature 672 689 1.0E-10 T 11-10-2018 SYN_02351 628e533b9c76b6858a96b35826f6346a 809 PRINTS PR00943 Copper-transporting ATPase signature 263 282 1.0E-10 T 11-10-2018 SYN_02351 628e533b9c76b6858a96b35826f6346a 809 PRINTS PR00943 Copper-transporting ATPase signature 205 224 1.0E-10 T 11-10-2018 SYN_02351 628e533b9c76b6858a96b35826f6346a 809 PRINTS PR00943 Copper-transporting ATPase signature 283 301 1.0E-10 T 11-10-2018 SYN_02351 628e533b9c76b6858a96b35826f6346a 809 PRINTS PR00943 Copper-transporting ATPase signature 417 431 1.0E-10 T 11-10-2018 SYN_02351 628e533b9c76b6858a96b35826f6346a 809 Gene3D G3DSA:3.40.1110.10 507 627 4.6E-91 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 SYN_02351 628e533b9c76b6858a96b35826f6346a 809 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 220 804 4.6E-190 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 SYN_03037 b12da02f9f2f2bd9744eef719aadbaf3 164 SMART SM00091 37 103 5.5E-5 T 11-10-2018 IPR000014 PAS domain SYN_03037 b12da02f9f2f2bd9744eef719aadbaf3 164 SUPERFAMILY SSF55785 22 149 4.89E-23 T 11-10-2018 IPR035965 PAS domain superfamily SYN_03037 b12da02f9f2f2bd9744eef719aadbaf3 164 Pfam PF08448 PAS fold 44 152 1.3E-12 T 11-10-2018 IPR013656 PAS fold-4 SYN_03037 b12da02f9f2f2bd9744eef719aadbaf3 164 Gene3D G3DSA:3.30.450.20 28 164 4.5E-21 T 11-10-2018 SYN_03037 b12da02f9f2f2bd9744eef719aadbaf3 164 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 38 158 5.2E-17 T 11-10-2018 IPR000014 PAS domain SYN_02446 5957280fa6f0a25ade027037f76d74cb 510 SUPERFAMILY SSF51905 29 419 3.41E-48 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_02446 5957280fa6f0a25ade027037f76d74cb 510 Gene3D G3DSA:1.10.10.1100 419 494 7.2E-20 T 11-10-2018 SYN_02446 5957280fa6f0a25ade027037f76d74cb 510 SUPERFAMILY SSF54373 244 338 1.18E-6 T 11-10-2018 SYN_02446 5957280fa6f0a25ade027037f76d74cb 510 Pfam PF01266 FAD dependent oxidoreductase 30 386 4.1E-65 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SYN_02446 5957280fa6f0a25ade027037f76d74cb 510 Gene3D G3DSA:3.30.9.10 113 348 9.6E-123 T 11-10-2018 SYN_02446 5957280fa6f0a25ade027037f76d74cb 510 Pfam PF04324 BFD-like [2Fe-2S] binding domain 432 485 4.5E-13 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain SYN_02446 5957280fa6f0a25ade027037f76d74cb 510 Gene3D G3DSA:3.50.50.60 30 381 9.6E-123 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_01683 f3b8b927ed40e925f7973baa3fffe61d 211 SUPERFAMILY SSF52317 2 205 1.06E-51 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like SYN_01683 f3b8b927ed40e925f7973baa3fffe61d 211 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 204 2.2E-64 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 SYN_01683 f3b8b927ed40e925f7973baa3fffe61d 211 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 205 33.344 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 SYN_01683 f3b8b927ed40e925f7973baa3fffe61d 211 PIRSF PIRSF000495 1 208 1.7E-69 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 SYN_01683 f3b8b927ed40e925f7973baa3fffe61d 211 Pfam PF00117 Glutamine amidotransferase class-I 5 202 8.5E-18 T 11-10-2018 IPR017926 Glutamine amidotransferase SYN_01683 f3b8b927ed40e925f7973baa3fffe61d 211 Gene3D G3DSA:3.40.50.880 1 211 5.3E-71 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like SYN_01489 9c6878c1646154c4cd8e6e1b2ce5f9a0 54 Pfam PF04964 Flp/Fap pilin component 7 51 4.9E-14 T 11-10-2018 IPR007047 Flp/Fap pilin component SYN_01291 b534eaf997e05a91228da2fcde9a269f 827 SMART SM00086 689 729 0.13 T 11-10-2018 IPR001610 PAC motif SYN_01291 b534eaf997e05a91228da2fcde9a269f 827 SMART SM00086 562 604 0.16 T 11-10-2018 IPR001610 PAC motif SYN_01291 b534eaf997e05a91228da2fcde9a269f 827 Pfam PF13426 PAS domain 628 728 2.8E-11 T 11-10-2018 IPR000014 PAS domain SYN_01291 b534eaf997e05a91228da2fcde9a269f 827 Pfam PF10442 FIST C domain 293 431 5.1E-18 T 11-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 SYN_01291 b534eaf997e05a91228da2fcde9a269f 827 SUPERFAMILY SSF55785 475 602 1.37E-22 T 11-10-2018 IPR035965 PAS domain superfamily SYN_01291 b534eaf997e05a91228da2fcde9a269f 827 Pfam PF08448 PAS fold 499 605 2.5E-12 T 11-10-2018 IPR013656 PAS fold-4 SYN_01291 b534eaf997e05a91228da2fcde9a269f 827 Pfam PF08495 FIST N domain 82 291 1.9E-26 T 11-10-2018 IPR013702 FIST domain, N-terminal SYN_01291 b534eaf997e05a91228da2fcde9a269f 827 SUPERFAMILY SSF47384 742 804 1.82E-7 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SYN_01291 b534eaf997e05a91228da2fcde9a269f 827 Gene3D G3DSA:3.30.450.20 607 727 1.6E-21 T 11-10-2018 SYN_01291 b534eaf997e05a91228da2fcde9a269f 827 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 490 611 1.8E-12 T 11-10-2018 IPR000014 PAS domain SYN_01291 b534eaf997e05a91228da2fcde9a269f 827 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 614 735 3.2E-15 T 11-10-2018 IPR000014 PAS domain SYN_01291 b534eaf997e05a91228da2fcde9a269f 827 SMART SM00091 616 683 2.4E-5 T 11-10-2018 IPR000014 PAS domain SYN_01291 b534eaf997e05a91228da2fcde9a269f 827 SMART SM00091 490 556 5.9E-5 T 11-10-2018 IPR000014 PAS domain SYN_01291 b534eaf997e05a91228da2fcde9a269f 827 SMART SM01204 293 433 1.5E-29 T 11-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 SYN_01291 b534eaf997e05a91228da2fcde9a269f 827 Gene3D G3DSA:3.30.450.20 477 606 4.2E-21 T 11-10-2018 SYN_01291 b534eaf997e05a91228da2fcde9a269f 827 SUPERFAMILY SSF55785 601 727 5.93E-21 T 11-10-2018 IPR035965 PAS domain superfamily SYN_01291 b534eaf997e05a91228da2fcde9a269f 827 Gene3D G3DSA:1.10.287.130 737 806 8.4E-10 T 11-10-2018 SYN_01291 b534eaf997e05a91228da2fcde9a269f 827 SMART SM00388 744 810 7.3E-5 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_01291 b534eaf997e05a91228da2fcde9a269f 827 SMART SM00897 79 292 3.9E-33 T 11-10-2018 IPR013702 FIST domain, N-terminal SYN_02918 763ad60db767dac4d404d2423da19346 275 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 46 57 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_02918 763ad60db767dac4d404d2423da19346 275 Pfam PF12838 4Fe-4S dicluster domain 12 60 1.6E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_02918 763ad60db767dac4d404d2423da19346 275 SUPERFAMILY SSF55469 88 272 1.44E-39 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SYN_02918 763ad60db767dac4d404d2423da19346 275 Pfam PF00881 Nitroreductase family 90 256 4.4E-29 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 SYN_02918 763ad60db767dac4d404d2423da19346 275 Gene3D G3DSA:3.40.109.10 70 273 9.2E-43 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SYN_02918 763ad60db767dac4d404d2423da19346 275 Gene3D G3DSA:3.30.70.20 5 65 1.4E-12 T 11-10-2018 SYN_02918 763ad60db767dac4d404d2423da19346 275 SUPERFAMILY SSF54862 5 68 1.11E-15 T 11-10-2018 SYN_00051 20bbb710c9800bc9f8245c6d62932ce6 467 Gene3D G3DSA:1.10.8.60 386 428 3.4E-5 T 11-10-2018 SYN_00051 20bbb710c9800bc9f8245c6d62932ce6 467 Gene3D G3DSA:3.40.50.300 346 385 3.4E-5 T 11-10-2018 SYN_00051 20bbb710c9800bc9f8245c6d62932ce6 467 Gene3D G3DSA:3.40.50.300 165 260 4.4E-7 T 11-10-2018 SYN_00051 20bbb710c9800bc9f8245c6d62932ce6 467 SMART SM00382 202 384 3.5E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00051 20bbb710c9800bc9f8245c6d62932ce6 467 SUPERFAMILY SSF160246 3 59 2.28E-11 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily SYN_00051 20bbb710c9800bc9f8245c6d62932ce6 467 SUPERFAMILY SSF52540 183 462 7.72E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00710 ebf52bc45233f78fe124f2b24d86d7d6 150 Pfam PF01613 Flavin reductase like domain 1 120 1.3E-14 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 SYN_00710 ebf52bc45233f78fe124f2b24d86d7d6 150 Gene3D G3DSA:2.30.110.10 1 140 2.9E-39 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 SYN_00710 ebf52bc45233f78fe124f2b24d86d7d6 150 SMART SM00903 1 122 8.6E-4 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 SYN_00710 ebf52bc45233f78fe124f2b24d86d7d6 150 SUPERFAMILY SSF50475 1 133 4.12E-28 T 11-10-2018 SYN_02039 29d3cd71639c4ac20eb9ea4407c1eabb 171 PIRSF PIRSF001467 2 170 5.3E-25 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 SYN_02039 29d3cd71639c4ac20eb9ea4407c1eabb 171 Gene3D G3DSA:2.40.100.10 6 171 2.9E-61 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily SYN_02039 29d3cd71639c4ac20eb9ea4407c1eabb 171 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 25 40 2.4E-13 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 SYN_02039 29d3cd71639c4ac20eb9ea4407c1eabb 171 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 51 63 2.4E-13 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 SYN_02039 29d3cd71639c4ac20eb9ea4407c1eabb 171 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 2.4E-13 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 SYN_02039 29d3cd71639c4ac20eb9ea4407c1eabb 171 SUPERFAMILY SSF50891 8 170 7.89E-56 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily SYN_02039 29d3cd71639c4ac20eb9ea4407c1eabb 171 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 46 63 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 SYN_02039 29d3cd71639c4ac20eb9ea4407c1eabb 171 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 12 169 1.3E-44 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 SYN_00708 7d06587384414bb97cc9ad7f78deba66 81 Gene3D G3DSA:3.30.300.20 5 69 1.1E-7 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta SYN_00708 7d06587384414bb97cc9ad7f78deba66 81 SUPERFAMILY SSF54814 23 66 5.43E-7 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 SYN_00708 7d06587384414bb97cc9ad7f78deba66 81 Pfam PF13083 KH domain 7 79 3.3E-21 T 11-10-2018 SYN_00708 7d06587384414bb97cc9ad7f78deba66 81 Hamap MF_00088 UPF0109 protein . 6 80 20.924 T 11-10-2018 IPR020627 Uncharacterised protein family UPF0109 SYN_00457 d5bde2a168e7d62cbd717c0f3d2845d6 399 Gene3D G3DSA:1.20.81.30 251 363 9.0E-19 T 11-10-2018 SYN_00457 d5bde2a168e7d62cbd717c0f3d2845d6 399 Pfam PF00482 Type II secretion system (T2SS), protein F 268 389 5.4E-20 T 11-10-2018 IPR018076 Type II secretion system F domain SYN_00457 d5bde2a168e7d62cbd717c0f3d2845d6 399 Pfam PF00482 Type II secretion system (T2SS), protein F 67 188 1.6E-25 T 11-10-2018 IPR018076 Type II secretion system F domain SYN_00457 d5bde2a168e7d62cbd717c0f3d2845d6 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 363 377 2.6E-14 T 11-10-2018 IPR003004 GspF/PilC family SYN_00457 d5bde2a168e7d62cbd717c0f3d2845d6 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 62 74 2.6E-14 T 11-10-2018 IPR003004 GspF/PilC family SYN_00457 d5bde2a168e7d62cbd717c0f3d2845d6 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 379 398 2.6E-14 T 11-10-2018 IPR003004 GspF/PilC family SYN_00457 d5bde2a168e7d62cbd717c0f3d2845d6 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 160 188 2.6E-14 T 11-10-2018 IPR003004 GspF/PilC family SYN_00457 d5bde2a168e7d62cbd717c0f3d2845d6 399 Gene3D G3DSA:1.20.81.30 50 170 2.9E-25 T 11-10-2018 SYN_02163 cadd5d86ceaffd02a4e637e07f917ec7 176 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 18 145 1.2E-37 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 SYN_02163 cadd5d86ceaffd02a4e637e07f917ec7 176 Gene3D G3DSA:3.30.70.560 16 174 6.7E-56 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 SYN_02163 cadd5d86ceaffd02a4e637e07f917ec7 176 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 17 145 6.6E-45 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 SYN_02163 cadd5d86ceaffd02a4e637e07f917ec7 176 SUPERFAMILY SSF55083 16 168 2.62E-53 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 SYN_02163 cadd5d86ceaffd02a4e637e07f917ec7 176 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 101 112 - T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 SYN_01967 3f5d3adff49f3d791a7f742ce5deffd1 140 SUPERFAMILY SSF55620 15 128 4.89E-28 T 11-10-2018 SYN_01967 3f5d3adff49f3d791a7f742ce5deffd1 140 Pfam PF14489 QueF-like protein 57 135 1.3E-33 T 11-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 SYN_01967 3f5d3adff49f3d791a7f742ce5deffd1 140 PIRSF PIRSF027377 10 139 1.2E-53 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 SYN_01967 3f5d3adff49f3d791a7f742ce5deffd1 140 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 25 134 3.2E-51 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 SYN_01967 3f5d3adff49f3d791a7f742ce5deffd1 140 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 140 50.894 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 SYN_01967 3f5d3adff49f3d791a7f742ce5deffd1 140 Gene3D G3DSA:3.30.1130.10 20 139 1.6E-46 T 11-10-2018 SYN_02380 5e17e0be5b1dd50a91779a48f015272c 546 SUPERFAMILY SSF52172 423 546 4.7E-24 T 11-10-2018 IPR011006 CheY-like superfamily SYN_02380 5e17e0be5b1dd50a91779a48f015272c 546 Pfam PF08447 PAS fold 71 158 6.5E-14 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 SYN_02380 5e17e0be5b1dd50a91779a48f015272c 546 SMART SM00086 122 164 6.9E-6 T 11-10-2018 IPR001610 PAC motif SYN_02380 5e17e0be5b1dd50a91779a48f015272c 546 Gene3D G3DSA:3.40.50.2300 422 546 2.3E-24 T 11-10-2018 SYN_02380 5e17e0be5b1dd50a91779a48f015272c 546 Pfam PF00072 Response regulator receiver domain 426 541 9.4E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_02380 5e17e0be5b1dd50a91779a48f015272c 546 SUPERFAMILY SSF55874 235 406 6.03E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_02380 5e17e0be5b1dd50a91779a48f015272c 546 Gene3D G3DSA:3.30.565.10 246 414 5.1E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_02380 5e17e0be5b1dd50a91779a48f015272c 546 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 285 404 5.1E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_02380 5e17e0be5b1dd50a91779a48f015272c 546 SMART SM00448 424 541 1.6E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_02380 5e17e0be5b1dd50a91779a48f015272c 546 SUPERFAMILY SSF55785 51 166 1.77E-17 T 11-10-2018 IPR035965 PAS domain superfamily SYN_02380 5e17e0be5b1dd50a91779a48f015272c 546 SUPERFAMILY SSF47384 175 244 4.9E-7 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SYN_02380 5e17e0be5b1dd50a91779a48f015272c 546 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 71 171 1.8E-11 T 11-10-2018 IPR000014 PAS domain SYN_02380 5e17e0be5b1dd50a91779a48f015272c 546 SMART SM00387 284 406 7.4E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_02380 5e17e0be5b1dd50a91779a48f015272c 546 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 384 3.8E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_02380 5e17e0be5b1dd50a91779a48f015272c 546 PRINTS PR00344 Bacterial sensor protein C-terminal signature 351 361 3.8E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_02380 5e17e0be5b1dd50a91779a48f015272c 546 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 403 3.8E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_02380 5e17e0be5b1dd50a91779a48f015272c 546 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 347 3.8E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_02380 5e17e0be5b1dd50a91779a48f015272c 546 Gene3D G3DSA:3.30.450.20 45 162 2.0E-21 T 11-10-2018 SYN_02380 5e17e0be5b1dd50a91779a48f015272c 546 Gene3D G3DSA:1.10.287.130 171 243 4.9E-16 T 11-10-2018 SYN_00954 16212b60b39c35028286bcaf5c46b6d7 318 SUPERFAMILY SSF53807 31 314 4.91E-74 T 11-10-2018 SYN_00954 16212b60b39c35028286bcaf5c46b6d7 318 Gene3D G3DSA:3.40.50.1980 24 201 7.2E-58 T 11-10-2018 SYN_00954 16212b60b39c35028286bcaf5c46b6d7 318 PRINTS PR00690 Adhesin family signature 79 96 2.6E-11 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 SYN_00954 16212b60b39c35028286bcaf5c46b6d7 318 PRINTS PR00690 Adhesin family signature 35 53 2.6E-11 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 SYN_00954 16212b60b39c35028286bcaf5c46b6d7 318 PRINTS PR00690 Adhesin family signature 66 79 2.6E-11 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 SYN_00954 16212b60b39c35028286bcaf5c46b6d7 318 PRINTS PR00690 Adhesin family signature 254 272 2.6E-11 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 SYN_00954 16212b60b39c35028286bcaf5c46b6d7 318 PRINTS PR00691 Adhesin B signature 143 162 2.7E-16 T 11-10-2018 IPR006129 Adhesin B GO:0007155 SYN_00954 16212b60b39c35028286bcaf5c46b6d7 318 PRINTS PR00691 Adhesin B signature 60 78 2.7E-16 T 11-10-2018 IPR006129 Adhesin B GO:0007155 SYN_00954 16212b60b39c35028286bcaf5c46b6d7 318 PRINTS PR00691 Adhesin B signature 250 267 2.7E-16 T 11-10-2018 IPR006129 Adhesin B GO:0007155 SYN_00954 16212b60b39c35028286bcaf5c46b6d7 318 PRINTS PR00691 Adhesin B signature 79 98 2.7E-16 T 11-10-2018 IPR006129 Adhesin B GO:0007155 SYN_00954 16212b60b39c35028286bcaf5c46b6d7 318 PRINTS PR00691 Adhesin B signature 294 312 2.7E-16 T 11-10-2018 IPR006129 Adhesin B GO:0007155 SYN_00954 16212b60b39c35028286bcaf5c46b6d7 318 PRINTS PR00691 Adhesin B signature 35 56 2.7E-16 T 11-10-2018 IPR006129 Adhesin B GO:0007155 SYN_00954 16212b60b39c35028286bcaf5c46b6d7 318 Gene3D G3DSA:3.40.50.1980 203 317 4.3E-33 T 11-10-2018 SYN_00954 16212b60b39c35028286bcaf5c46b6d7 318 Pfam PF01297 Zinc-uptake complex component A periplasmic 38 312 2.0E-72 T 11-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 SYN_02590 a3fdddb047b87b1e8101effcb62074ba 448 Pfam PF01037 Lrp/AsnC ligand binding domain 6 77 1.0E-14 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain SYN_02590 a3fdddb047b87b1e8101effcb62074ba 448 Pfam PF02885 Glycosyl transferase family, helical bundle domain 112 172 1.4E-13 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 SYN_02590 a3fdddb047b87b1e8101effcb62074ba 448 Gene3D G3DSA:3.40.1030.10 180 448 7.5E-96 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 SYN_02590 a3fdddb047b87b1e8101effcb62074ba 448 Gene3D G3DSA:3.30.70.920 1 74 5.4E-21 T 11-10-2018 SYN_02590 a3fdddb047b87b1e8101effcb62074ba 448 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 116 443 4.1E-109 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 SYN_02590 a3fdddb047b87b1e8101effcb62074ba 448 SUPERFAMILY SSF47648 110 177 1.7E-13 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 SYN_02590 a3fdddb047b87b1e8101effcb62074ba 448 Pfam PF00591 Glycosyl transferase family, a/b domain 184 434 6.3E-84 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 SYN_02590 a3fdddb047b87b1e8101effcb62074ba 448 SUPERFAMILY SSF52418 186 446 4.58E-83 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 SYN_02590 a3fdddb047b87b1e8101effcb62074ba 448 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 113 444 33.779 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 SYN_02590 a3fdddb047b87b1e8101effcb62074ba 448 SUPERFAMILY SSF54909 2 79 2.55E-17 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel SYN_02590 a3fdddb047b87b1e8101effcb62074ba 448 Gene3D G3DSA:1.20.970.10 99 178 1.2E-15 T 11-10-2018 SYN_01810 753e569546017bbcce7171cfce281a4c 332 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 1.7E-40 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_01810 753e569546017bbcce7171cfce281a4c 332 SUPERFAMILY SSF55347 149 312 2.08E-79 T 11-10-2018 SYN_01810 753e569546017bbcce7171cfce281a4c 332 SMART SM00846 3 150 3.6E-100 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_01810 753e569546017bbcce7171cfce281a4c 332 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 5.1E-137 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_01810 753e569546017bbcce7171cfce281a4c 332 SUPERFAMILY SSF51735 3 166 2.88E-72 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_01810 753e569546017bbcce7171cfce281a4c 332 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_01810 753e569546017bbcce7171cfce281a4c 332 PIRSF PIRSF000149 1 332 9.0E-133 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_01810 753e569546017bbcce7171cfce281a4c 332 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 1.0E-68 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_01810 753e569546017bbcce7171cfce281a4c 332 Gene3D G3DSA:3.30.360.10 149 314 9.1E-157 T 11-10-2018 SYN_01810 753e569546017bbcce7171cfce281a4c 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 1.0E-48 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_01810 753e569546017bbcce7171cfce281a4c 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 1.0E-48 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_01810 753e569546017bbcce7171cfce281a4c 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 1.0E-48 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_01810 753e569546017bbcce7171cfce281a4c 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 1.0E-48 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_01810 753e569546017bbcce7171cfce281a4c 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 1.0E-48 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_01810 753e569546017bbcce7171cfce281a4c 332 Gene3D G3DSA:3.40.50.720 4 326 9.1E-157 T 11-10-2018 SYN_01355 cba6e48aea9a253cd00b726b8d853490 828 Pfam PF10105 Uncharacterized protein conserved in bacteria (DUF2344) 611 799 3.3E-37 T 11-10-2018 IPR018768 Domain of unknown function DUF2344 SYN_01355 cba6e48aea9a253cd00b726b8d853490 828 Pfam PF04055 Radical SAM superfamily 241 404 1.9E-14 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_01355 cba6e48aea9a253cd00b726b8d853490 828 SUPERFAMILY SSF102114 210 574 8.24E-43 T 11-10-2018 SYN_01355 cba6e48aea9a253cd00b726b8d853490 828 SMART SM00729 236 452 8.0E-26 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SYN_01355 cba6e48aea9a253cd00b726b8d853490 828 TIGRFAM TIGR03960 rSAM_fuse_unch: radical SAM family uncharacterized protein 4 576 2.2E-219 T 11-10-2018 IPR023862 Conserved hypothetical protein CHP03960, radical SAM SYN_01355 cba6e48aea9a253cd00b726b8d853490 828 TIGRFAM TIGR03936 sam_1_link_chp: radical SAM-linked protein 611 821 9.3E-44 T 11-10-2018 IPR018768 Domain of unknown function DUF2344 SYN_01355 cba6e48aea9a253cd00b726b8d853490 828 Gene3D G3DSA:3.80.30.20 235 459 1.4E-21 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe SYN_00760 fcd6cdecfeccd689fd84e749cace0b90 116 SUPERFAMILY SSF54197 2 110 3.26E-38 T 11-10-2018 IPR036265 HIT-like superfamily SYN_00760 fcd6cdecfeccd689fd84e749cace0b90 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 11-10-2018 IPR019808 Histidine triad, conserved site SYN_00760 fcd6cdecfeccd689fd84e749cace0b90 116 Gene3D G3DSA:3.30.428.10 1 111 3.3E-37 T 11-10-2018 IPR036265 HIT-like superfamily SYN_00760 fcd6cdecfeccd689fd84e749cace0b90 116 PRINTS PR00332 Histidine triad family signature 6 22 4.8E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein SYN_00760 fcd6cdecfeccd689fd84e749cace0b90 116 PRINTS PR00332 Histidine triad family signature 27 45 4.8E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein SYN_00760 fcd6cdecfeccd689fd84e749cace0b90 116 PRINTS PR00332 Histidine triad family signature 95 105 4.8E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein SYN_00760 fcd6cdecfeccd689fd84e749cace0b90 116 Pfam PF01230 HIT domain 12 107 3.0E-26 T 11-10-2018 IPR001310 Histidine triad (HIT) protein SYN_03076 587fbc5bd519aa997dde62d533b01743 262 Gene3D G3DSA:1.10.12.10 205 262 3.1E-15 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal SYN_03076 587fbc5bd519aa997dde62d533b01743 262 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 103 123 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 SYN_03076 587fbc5bd519aa997dde62d533b01743 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 261 3.3E-64 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 SYN_03076 587fbc5bd519aa997dde62d533b01743 262 SUPERFAMILY SSF52096 1 261 3.43E-89 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily SYN_03076 587fbc5bd519aa997dde62d533b01743 262 Gene3D G3DSA:3.90.226.10 1 204 6.0E-72 T 11-10-2018 SYN_02909 8d28fbce8e201d1940811a5faa013394 1606 Pfam PF13087 AAA domain 1168 1337 1.2E-12 T 11-10-2018 SYN_02909 8d28fbce8e201d1940811a5faa013394 1606 Gene3D G3DSA:3.40.50.300 1173 1371 2.7E-25 T 11-10-2018 SYN_02909 8d28fbce8e201d1940811a5faa013394 1606 SUPERFAMILY SSF52980 1371 1476 5.18E-13 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 SYN_02909 8d28fbce8e201d1940811a5faa013394 1606 Gene3D G3DSA:3.40.960.10 1375 1477 3.4E-19 T 11-10-2018 SYN_02909 8d28fbce8e201d1940811a5faa013394 1606 Gene3D G3DSA:3.40.50.300 360 545 1.2E-20 T 11-10-2018 SYN_02909 8d28fbce8e201d1940811a5faa013394 1606 Gene3D G3DSA:3.40.50.300 961 1147 1.9E-15 T 11-10-2018 SYN_02909 8d28fbce8e201d1940811a5faa013394 1606 Pfam PF13086 AAA domain 1082 1122 8.0E-9 T 11-10-2018 SYN_02909 8d28fbce8e201d1940811a5faa013394 1606 Pfam PF13086 AAA domain 381 508 2.4E-9 T 11-10-2018 SYN_02909 8d28fbce8e201d1940811a5faa013394 1606 SUPERFAMILY SSF52540 381 1337 1.31E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02909 8d28fbce8e201d1940811a5faa013394 1606 Pfam PF04480 Protein of unknown function (DUF559) 1386 1470 7.6E-7 T 11-10-2018 IPR007569 Protein of unknown function DUF559 SYN_03171 3e2fac3fcb17e294dc7f8aac32edd040 128 Gene3D G3DSA:3.30.420.10 1 89 2.5E-8 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 SYN_03171 3e2fac3fcb17e294dc7f8aac32edd040 128 SUPERFAMILY SSF53098 1 123 9.1E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily SYN_03171 3e2fac3fcb17e294dc7f8aac32edd040 128 Pfam PF00665 Integrase core domain 1 69 1.2E-8 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 SYN_02883 0a9940967c384486bf3d10b58ee560db 254 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 2 250 3.1E-74 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 SYN_02883 0a9940967c384486bf3d10b58ee560db 254 SUPERFAMILY SSF53067 1 121 7.51E-37 T 11-10-2018 SYN_02883 0a9940967c384486bf3d10b58ee560db 254 Pfam PF03309 Type III pantothenate kinase 2 205 1.5E-70 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 SYN_02883 0a9940967c384486bf3d10b58ee560db 254 Gene3D G3DSA:3.30.420.40 89 254 5.8E-60 T 11-10-2018 SYN_02883 0a9940967c384486bf3d10b58ee560db 254 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 254 36.401 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 SYN_02883 0a9940967c384486bf3d10b58ee560db 254 Gene3D G3DSA:3.30.420.40 1 88 4.9E-33 T 11-10-2018 SYN_02883 0a9940967c384486bf3d10b58ee560db 254 SUPERFAMILY SSF53067 124 253 8.7E-39 T 11-10-2018 SYN_00974 f46b98ed903c41eba56771e6984e60a3 152 SMART SM00448 28 139 9.8E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00974 f46b98ed903c41eba56771e6984e60a3 152 SUPERFAMILY SSF52172 28 144 5.69E-31 T 11-10-2018 IPR011006 CheY-like superfamily SYN_00974 f46b98ed903c41eba56771e6984e60a3 152 Pfam PF00072 Response regulator receiver domain 30 136 5.7E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00974 f46b98ed903c41eba56771e6984e60a3 152 Gene3D G3DSA:3.40.50.12740 26 151 2.4E-29 T 11-10-2018 SYN_01407 db802f49d7a52bd0f5da7db2456cf1f0 313 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 25 233 1.1E-68 T 11-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SYN_01407 db802f49d7a52bd0f5da7db2456cf1f0 313 Gene3D G3DSA:1.10.3810.10 51 247 5.1E-60 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SYN_01407 db802f49d7a52bd0f5da7db2456cf1f0 313 Pfam PF00912 Transglycosylase 67 232 1.5E-54 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SYN_01407 db802f49d7a52bd0f5da7db2456cf1f0 313 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 12 238 36.65 T 11-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SYN_01407 db802f49d7a52bd0f5da7db2456cf1f0 313 SUPERFAMILY SSF53955 59 241 3.37E-61 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily SYN_01611 947aed74bb9fb88641d7ac9d760f0533 335 Gene3D G3DSA:3.40.50.720 124 283 1.1E-32 T 11-10-2018 SYN_01611 947aed74bb9fb88641d7ac9d760f0533 335 Pfam PF00999 Sodium/hydrogen exchanger family 1 95 5.6E-8 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SYN_01611 947aed74bb9fb88641d7ac9d760f0533 335 Gene3D G3DSA:1.20.1530.20 1 102 6.2E-10 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily SYN_01611 947aed74bb9fb88641d7ac9d760f0533 335 Pfam PF02254 TrkA-N domain 126 238 1.1E-22 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SYN_01611 947aed74bb9fb88641d7ac9d760f0533 335 SUPERFAMILY SSF51735 124 262 9.24E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_01611 947aed74bb9fb88641d7ac9d760f0533 335 PRINTS PR00335 TrkA potassium uptake protein signature 171 181 2.5E-7 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SYN_01611 947aed74bb9fb88641d7ac9d760f0533 335 PRINTS PR00335 TrkA potassium uptake protein signature 182 192 2.5E-7 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SYN_01611 947aed74bb9fb88641d7ac9d760f0533 335 PRINTS PR00335 TrkA potassium uptake protein signature 142 156 2.5E-7 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SYN_01611 947aed74bb9fb88641d7ac9d760f0533 335 PRINTS PR00335 TrkA potassium uptake protein signature 125 139 2.5E-7 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SYN_02681 74d79eb3c10f4b5344454a6a03210b0f 379 SUPERFAMILY SSF53756 2 375 1.35E-39 T 11-10-2018 SYN_02681 74d79eb3c10f4b5344454a6a03210b0f 379 Gene3D G3DSA:3.40.50.2000 1 192 2.6E-7 T 11-10-2018 SYN_02681 74d79eb3c10f4b5344454a6a03210b0f 379 Pfam PF13439 Glycosyltransferase Family 4 24 152 2.4E-7 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 SYN_02681 74d79eb3c10f4b5344454a6a03210b0f 379 Pfam PF00534 Glycosyl transferases group 1 189 353 3.6E-14 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 SYN_02681 74d79eb3c10f4b5344454a6a03210b0f 379 Gene3D G3DSA:3.40.50.2000 193 359 1.7E-22 T 11-10-2018 SYN_02162 01cfb3cbba36d10d8b0d6b3300196b31 268 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 3 125 2.1E-34 T 11-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SYN_02162 01cfb3cbba36d10d8b0d6b3300196b31 268 SUPERFAMILY SSF55347 127 236 1.59E-36 T 11-10-2018 SYN_02162 01cfb3cbba36d10d8b0d6b3300196b31 268 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 2 265 3.1E-91 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SYN_02162 01cfb3cbba36d10d8b0d6b3300196b31 268 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 2.5E-44 T 11-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SYN_02162 01cfb3cbba36d10d8b0d6b3300196b31 268 SUPERFAMILY SSF51735 1 266 9.07E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_02162 01cfb3cbba36d10d8b0d6b3300196b31 268 Gene3D G3DSA:3.30.360.10 127 234 2.9E-101 T 11-10-2018 SYN_02162 01cfb3cbba36d10d8b0d6b3300196b31 268 PIRSF PIRSF000161 1 268 5.4E-86 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SYN_02162 01cfb3cbba36d10d8b0d6b3300196b31 268 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 11-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SYN_02162 01cfb3cbba36d10d8b0d6b3300196b31 268 Gene3D G3DSA:3.40.50.720 5 264 2.9E-101 T 11-10-2018 SYN_02162 01cfb3cbba36d10d8b0d6b3300196b31 268 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 265 34.124 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SYN_00337 05f1b1d6805b069547c9a97f9849613d 64 SUPERFAMILY SSF89360 3 49 1.67E-6 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 SYN_00337 05f1b1d6805b069547c9a97f9849613d 64 Gene3D G3DSA:2.60.300.12 1 56 9.8E-6 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 SYN_01666 decf5024d097769a9183f7e705404ce4 261 SUPERFAMILY SSF52540 2 220 5.74E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01666 decf5024d097769a9183f7e705404ce4 261 Gene3D G3DSA:3.40.50.300 1 240 1.1E-72 T 11-10-2018 SYN_01666 decf5024d097769a9183f7e705404ce4 261 SMART SM00382 26 208 2.6E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01666 decf5024d097769a9183f7e705404ce4 261 Pfam PF00005 ABC transporter 17 160 8.1E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_02798 832775025b6d895416c1fd5907ef4f48 769 Gene3D G3DSA:1.10.460.10 135 574 8.1E-169 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SYN_02798 832775025b6d895416c1fd5907ef4f48 769 Pfam PF01751 Toprim domain 5 112 8.5E-29 T 11-10-2018 IPR006171 TOPRIM domain SYN_02798 832775025b6d895416c1fd5907ef4f48 769 SMART SM00436 104 192 5.8E-46 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 SYN_02798 832775025b6d895416c1fd5907ef4f48 769 Pfam PF01131 DNA topoisomerase 128 571 1.7E-122 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 SYN_02798 832775025b6d895416c1fd5907ef4f48 769 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 717 53.998 T 11-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 SYN_02798 832775025b6d895416c1fd5907ef4f48 769 Gene3D G3DSA:1.10.290.10 270 405 8.1E-169 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 SYN_02798 832775025b6d895416c1fd5907ef4f48 769 Gene3D G3DSA:3.30.65.10 585 639 9.1E-16 T 11-10-2018 SYN_02798 832775025b6d895416c1fd5907ef4f48 769 Gene3D G3DSA:3.30.65.10 640 690 6.1E-11 T 11-10-2018 SYN_02798 832775025b6d895416c1fd5907ef4f48 769 SUPERFAMILY SSF57783 646 688 2.04E-13 T 11-10-2018 SYN_02798 832775025b6d895416c1fd5907ef4f48 769 SMART SM00493 3 103 5.8E-31 T 11-10-2018 IPR006171 TOPRIM domain SYN_02798 832775025b6d895416c1fd5907ef4f48 769 Gene3D G3DSA:3.40.50.140 1 134 1.2E-49 T 11-10-2018 SYN_02798 832775025b6d895416c1fd5907ef4f48 769 SUPERFAMILY SSF56712 4 664 3.92E-187 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain SYN_02798 832775025b6d895416c1fd5907ef4f48 769 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 162 180 6.1E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 SYN_02798 832775025b6d895416c1fd5907ef4f48 769 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 497 511 6.1E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 SYN_02798 832775025b6d895416c1fd5907ef4f48 769 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 6.1E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 SYN_02798 832775025b6d895416c1fd5907ef4f48 769 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 390 406 6.1E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 SYN_02798 832775025b6d895416c1fd5907ef4f48 769 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 313 322 6.1E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 SYN_02798 832775025b6d895416c1fd5907ef4f48 769 Gene3D G3DSA:2.70.20.10 184 481 8.1E-169 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SYN_02798 832775025b6d895416c1fd5907ef4f48 769 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 602 637 2.0E-14 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 SYN_02798 832775025b6d895416c1fd5907ef4f48 769 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 691 730 3.8E-12 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 SYN_02798 832775025b6d895416c1fd5907ef4f48 769 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 734 762 0.28 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 SYN_02798 832775025b6d895416c1fd5907ef4f48 769 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 654 687 3.1E-15 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 SYN_02798 832775025b6d895416c1fd5907ef4f48 769 SUPERFAMILY SSF57783 594 640 5.87E-14 T 11-10-2018 SYN_02798 832775025b6d895416c1fd5907ef4f48 769 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 299 322 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 SYN_02798 832775025b6d895416c1fd5907ef4f48 769 SMART SM00437 262 534 1.1E-114 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 SYN_02798 832775025b6d895416c1fd5907ef4f48 769 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 635 8.9E-240 T 11-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 SYN_01579 ca2030511101be0d2a51b42af1f24a76 267 Pfam PF13189 Cytidylate kinase-like family 4 166 3.1E-36 T 11-10-2018 SYN_01579 ca2030511101be0d2a51b42af1f24a76 267 Pfam PF04972 BON domain 201 265 9.9E-8 T 11-10-2018 IPR007055 BON domain SYN_01579 ca2030511101be0d2a51b42af1f24a76 267 Gene3D G3DSA:3.40.50.300 1 186 1.1E-41 T 11-10-2018 SYN_01579 ca2030511101be0d2a51b42af1f24a76 267 SUPERFAMILY SSF52540 15 179 3.68E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02097 de0ac15b8b59870a68a83bbbd90057e5 219 SUPERFAMILY SSF47917 106 215 9.16E-40 T 11-10-2018 SYN_02097 de0ac15b8b59870a68a83bbbd90057e5 219 Gene3D G3DSA:3.40.50.300 1 105 1.3E-35 T 11-10-2018 SYN_02097 de0ac15b8b59870a68a83bbbd90057e5 219 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 1 103 3.1E-27 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SYN_02097 de0ac15b8b59870a68a83bbbd90057e5 219 SUPERFAMILY SSF52540 1 106 1.89E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02097 de0ac15b8b59870a68a83bbbd90057e5 219 Gene3D G3DSA:1.10.1140.10 106 219 1.2E-41 T 11-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SYN_01448 616a049b14931d1182f53a656a0eca72 691 Gene3D G3DSA:3.40.30.10 11 180 6.2E-70 T 11-10-2018 SYN_01448 616a049b14931d1182f53a656a0eca72 691 Gene3D G3DSA:1.50.10.10 403 599 1.8E-12 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 SYN_01448 616a049b14931d1182f53a656a0eca72 691 SUPERFAMILY SSF52833 10 135 2.79E-32 T 11-10-2018 IPR036249 Thioredoxin-like superfamily SYN_01448 616a049b14931d1182f53a656a0eca72 691 PIRSF PIRSF006402 2 691 7.9E-250 T 11-10-2018 IPR024705 Spermatogenesis-associated protein 20 SYN_01448 616a049b14931d1182f53a656a0eca72 691 Pfam PF03190 Protein of unknown function, DUF255 12 174 1.3E-76 T 11-10-2018 IPR004879 Domain of unknown function DUF255 SYN_01448 616a049b14931d1182f53a656a0eca72 691 SUPERFAMILY SSF48208 191 546 6.12E-80 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 SYN_02677 b14768206ecc39447755d58c92374e5f 731 Gene3D G3DSA:3.40.50.720 169 292 2.9E-19 T 11-10-2018 SYN_02677 b14768206ecc39447755d58c92374e5f 731 Gene3D G3DSA:3.40.50.720 385 521 1.8E-32 T 11-10-2018 SYN_02677 b14768206ecc39447755d58c92374e5f 731 SUPERFAMILY SSF50129 1 181 2.83E-15 T 11-10-2018 IPR011032 GroES-like superfamily SYN_02677 b14768206ecc39447755d58c92374e5f 731 Pfam PF00107 Zinc-binding dehydrogenase 183 295 2.1E-10 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SYN_02677 b14768206ecc39447755d58c92374e5f 731 SUPERFAMILY SSF51735 397 536 1.26E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_02677 b14768206ecc39447755d58c92374e5f 731 SUPERFAMILY SSF55347 529 651 1.8E-12 T 11-10-2018 SYN_02677 b14768206ecc39447755d58c92374e5f 731 SUPERFAMILY SSF51735 145 300 6.9E-22 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_02677 b14768206ecc39447755d58c92374e5f 731 Gene3D G3DSA:3.30.360.10 523 717 3.5E-26 T 11-10-2018 SYN_02677 b14768206ecc39447755d58c92374e5f 731 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 404 523 4.9E-23 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 SYN_02926 bc5dbc949eb11bba683d65185f5199a2 174 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 8 164 36.058 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_02926 bc5dbc949eb11bba683d65185f5199a2 174 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 10 158 2.1E-66 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_02926 bc5dbc949eb11bba683d65185f5199a2 174 Gene3D G3DSA:3.30.70.640 7 166 2.7E-66 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_02926 bc5dbc949eb11bba683d65185f5199a2 174 SUPERFAMILY SSF55040 17 161 4.18E-59 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_02926 bc5dbc949eb11bba683d65185f5199a2 174 Pfam PF01967 MoaC family 21 156 9.8E-54 T 11-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_01673 3a8c64f94cdec038b3931fafac58fb78 319 SUPERFAMILY SSF158997 11 73 1.02E-8 T 11-10-2018 SYN_01673 3a8c64f94cdec038b3931fafac58fb78 319 Pfam PF03966 Trm112p-like protein 9 59 8.4E-6 T 11-10-2018 IPR005651 Trm112-like SYN_01673 3a8c64f94cdec038b3931fafac58fb78 319 Gene3D G3DSA:3.40.50.150 109 314 1.4E-17 T 11-10-2018 SYN_01673 3a8c64f94cdec038b3931fafac58fb78 319 Pfam PF08241 Methyltransferase domain 119 236 6.1E-8 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 SYN_01673 3a8c64f94cdec038b3931fafac58fb78 319 Gene3D G3DSA:2.20.25.10 15 80 6.7E-7 T 11-10-2018 SYN_01673 3a8c64f94cdec038b3931fafac58fb78 319 SUPERFAMILY SSF53335 86 252 4.06E-16 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_00950 d478600b3d216834c033044634ab5458 292 SUPERFAMILY SSF51569 18 286 7.42E-104 T 11-10-2018 SYN_00950 d478600b3d216834c033044634ab5458 292 Gene3D G3DSA:3.20.20.70 14 289 2.5E-103 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_00950 d478600b3d216834c033044634ab5458 292 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 25 287 50.687 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 SYN_00950 d478600b3d216834c033044634ab5458 292 Pfam PF00793 DAHP synthetase I family 23 284 2.1E-69 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 SYN_00950 d478600b3d216834c033044634ab5458 292 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 30 285 5.4E-117 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 SYN_00990 033c3e0cef5f333f8aa36890ee90a99d 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 106 1.5E-39 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00990 033c3e0cef5f333f8aa36890ee90a99d 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 11-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00990 033c3e0cef5f333f8aa36890ee90a99d 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 28.073 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00990 033c3e0cef5f333f8aa36890ee90a99d 110 SUPERFAMILY SSF54843 1 110 2.35E-40 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 SYN_00990 033c3e0cef5f333f8aa36890ee90a99d 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 2.0E-35 T 11-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SYN_00990 033c3e0cef5f333f8aa36890ee90a99d 110 Gene3D G3DSA:3.90.470.10 1 110 3.5E-47 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 SYN_00076 fb8803651cb71e6086915698ed3c2575 138 PIRSF PIRSF032131 1 138 2.1E-36 T 11-10-2018 IPR009562 Protein of unknown function DUF1178 SYN_00076 fb8803651cb71e6086915698ed3c2575 138 Pfam PF06676 Protein of unknown function (DUF1178) 1 135 9.4E-42 T 11-10-2018 IPR009562 Protein of unknown function DUF1178 SYN_02074 89aea0d438ff62be72a67564664c17bd 1077 Gene3D G3DSA:3.30.70.1440 683 872 0.0 T 11-10-2018 SYN_02074 89aea0d438ff62be72a67564664c17bd 1077 Pfam PF00873 AcrB/AcrD/AcrF family 4 1034 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SYN_02074 89aea0d438ff62be72a67564664c17bd 1077 SUPERFAMILY SSF82693 137 332 2.43E-28 T 11-10-2018 SYN_02074 89aea0d438ff62be72a67564664c17bd 1077 SUPERFAMILY SSF82866 816 1036 6.41E-41 T 11-10-2018 SYN_02074 89aea0d438ff62be72a67564664c17bd 1077 Gene3D G3DSA:1.20.1640.10 524 1032 0.0 T 11-10-2018 SYN_02074 89aea0d438ff62be72a67564664c17bd 1077 Gene3D G3DSA:3.30.2090.10 732 820 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SYN_02074 89aea0d438ff62be72a67564664c17bd 1077 Gene3D G3DSA:3.30.70.1430 40 828 0.0 T 11-10-2018 SYN_02074 89aea0d438ff62be72a67564664c17bd 1077 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1047 0.0 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 SYN_02074 89aea0d438ff62be72a67564664c17bd 1077 PRINTS PR00702 Acriflavin resistance protein family signature 630 644 6.8E-105 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SYN_02074 89aea0d438ff62be72a67564664c17bd 1077 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 6.8E-105 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SYN_02074 89aea0d438ff62be72a67564664c17bd 1077 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 6.8E-105 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SYN_02074 89aea0d438ff62be72a67564664c17bd 1077 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 6.8E-105 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SYN_02074 89aea0d438ff62be72a67564664c17bd 1077 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 6.8E-105 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SYN_02074 89aea0d438ff62be72a67564664c17bd 1077 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 6.8E-105 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SYN_02074 89aea0d438ff62be72a67564664c17bd 1077 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 6.8E-105 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SYN_02074 89aea0d438ff62be72a67564664c17bd 1077 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 6.8E-105 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SYN_02074 89aea0d438ff62be72a67564664c17bd 1077 PRINTS PR00702 Acriflavin resistance protein family signature 561 578 6.8E-105 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SYN_02074 89aea0d438ff62be72a67564664c17bd 1077 Gene3D G3DSA:3.30.70.1320 135 332 0.0 T 11-10-2018 SYN_02074 89aea0d438ff62be72a67564664c17bd 1077 SUPERFAMILY SSF82866 299 499 2.49E-47 T 11-10-2018 SYN_02074 89aea0d438ff62be72a67564664c17bd 1077 SUPERFAMILY SSF82693 40 132 3.14E-24 T 11-10-2018 SYN_02074 89aea0d438ff62be72a67564664c17bd 1077 Gene3D G3DSA:3.30.70.1430 578 682 0.0 T 11-10-2018 SYN_02074 89aea0d438ff62be72a67564664c17bd 1077 Gene3D G3DSA:1.20.1640.10 10 523 0.0 T 11-10-2018 SYN_02074 89aea0d438ff62be72a67564664c17bd 1077 SUPERFAMILY SSF82693 574 678 3.92E-29 T 11-10-2018 SYN_02074 89aea0d438ff62be72a67564664c17bd 1077 Gene3D G3DSA:3.30.2090.10 182 279 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SYN_02074 89aea0d438ff62be72a67564664c17bd 1077 SUPERFAMILY SSF82714 731 817 9.42E-20 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SYN_02074 89aea0d438ff62be72a67564664c17bd 1077 SUPERFAMILY SSF82714 184 274 3.4E-20 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SYN_00165 38d5c47987e5a61936e43c583adfc31f 194 SUPERFAMILY SSF74653 62 190 8.63E-19 T 11-10-2018 SYN_00165 38d5c47987e5a61936e43c583adfc31f 194 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 118 192 9.4E-13 T 11-10-2018 IPR006260 TonB/TolA, C-terminal SYN_00165 38d5c47987e5a61936e43c583adfc31f 194 Gene3D G3DSA:3.30.1150.10 55 193 5.2E-22 T 11-10-2018 SYN_00165 38d5c47987e5a61936e43c583adfc31f 194 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 118 192 7.1E-16 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 SYN_00919 504056074aea6ff768e6939a37edbc30 185 Gene3D G3DSA:3.30.1360.40 31 105 1.5E-66 T 11-10-2018 SYN_00919 504056074aea6ff768e6939a37edbc30 185 SUPERFAMILY SSF55194 3 184 3.14E-69 T 11-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 SYN_00919 504056074aea6ff768e6939a37edbc30 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 26.809 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 SYN_00919 504056074aea6ff768e6939a37edbc30 185 Pfam PF01765 Ribosome recycling factor 20 183 1.7E-63 T 11-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 SYN_00919 504056074aea6ff768e6939a37edbc30 185 Gene3D G3DSA:1.10.132.20 12 182 1.5E-66 T 11-10-2018 SYN_00919 504056074aea6ff768e6939a37edbc30 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 5.8E-71 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 SYN_02155 d267677a9fe77fde0da04ced24667fb5 396 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 13 396 70.958 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 SYN_02155 d267677a9fe77fde0da04ced24667fb5 396 SUPERFAMILY SSF53383 10 394 5.65E-138 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SYN_02155 d267677a9fe77fde0da04ced24667fb5 396 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 14 393 7.6E-163 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 SYN_02155 d267677a9fe77fde0da04ced24667fb5 396 Pfam PF00202 Aminotransferase class-III 19 392 3.0E-127 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SYN_02155 d267677a9fe77fde0da04ced24667fb5 396 Gene3D G3DSA:3.90.1150.10 22 386 1.5E-157 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SYN_02155 d267677a9fe77fde0da04ced24667fb5 396 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 220 257 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SYN_02155 d267677a9fe77fde0da04ced24667fb5 396 Gene3D G3DSA:3.40.640.10 57 302 1.5E-157 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SYN_02155 d267677a9fe77fde0da04ced24667fb5 396 PIRSF PIRSF000521 172 396 2.1E-39 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SYN_02155 d267677a9fe77fde0da04ced24667fb5 396 PIRSF PIRSF000521 8 158 1.7E-10 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SYN_02213 4ef5bc303850e46254e0ac51fc9ae5f0 718 SUPERFAMILY SSF47384 338 408 2.55E-10 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SYN_02213 4ef5bc303850e46254e0ac51fc9ae5f0 718 Gene3D G3DSA:3.30.450.20 210 320 2.9E-21 T 11-10-2018 SYN_02213 4ef5bc303850e46254e0ac51fc9ae5f0 718 Pfam PF00072 Response regulator receiver domain 601 709 7.7E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_02213 4ef5bc303850e46254e0ac51fc9ae5f0 718 SMART SM00448 599 711 7.8E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_02213 4ef5bc303850e46254e0ac51fc9ae5f0 718 SUPERFAMILY SSF55874 400 580 3.41E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_02213 4ef5bc303850e46254e0ac51fc9ae5f0 718 Pfam PF13185 GAF domain 64 197 2.3E-19 T 11-10-2018 IPR003018 GAF domain GO:0005515 SYN_02213 4ef5bc303850e46254e0ac51fc9ae5f0 718 SMART SM00091 215 282 3.0E-4 T 11-10-2018 IPR000014 PAS domain SYN_02213 4ef5bc303850e46254e0ac51fc9ae5f0 718 SUPERFAMILY SSF55785 202 320 2.44E-17 T 11-10-2018 IPR035965 PAS domain superfamily SYN_02213 4ef5bc303850e46254e0ac51fc9ae5f0 718 SMART SM00387 455 579 1.3E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_02213 4ef5bc303850e46254e0ac51fc9ae5f0 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 539 557 1.3E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_02213 4ef5bc303850e46254e0ac51fc9ae5f0 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 576 1.3E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_02213 4ef5bc303850e46254e0ac51fc9ae5f0 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 520 1.3E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_02213 4ef5bc303850e46254e0ac51fc9ae5f0 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 534 1.3E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_02213 4ef5bc303850e46254e0ac51fc9ae5f0 718 Pfam PF13426 PAS domain 226 320 4.1E-8 T 11-10-2018 IPR000014 PAS domain SYN_02213 4ef5bc303850e46254e0ac51fc9ae5f0 718 Gene3D G3DSA:1.10.287.130 336 408 5.4E-16 T 11-10-2018 SYN_02213 4ef5bc303850e46254e0ac51fc9ae5f0 718 SUPERFAMILY SSF55781 64 208 8.07E-14 T 11-10-2018 SYN_02213 4ef5bc303850e46254e0ac51fc9ae5f0 718 Gene3D G3DSA:3.30.450.40 64 204 8.9E-12 T 11-10-2018 IPR029016 GAF-like domain superfamily SYN_02213 4ef5bc303850e46254e0ac51fc9ae5f0 718 Gene3D G3DSA:3.40.50.2300 598 717 2.3E-26 T 11-10-2018 SYN_02213 4ef5bc303850e46254e0ac51fc9ae5f0 718 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 457 577 3.7E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_02213 4ef5bc303850e46254e0ac51fc9ae5f0 718 SMART SM00388 344 410 7.5E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_02213 4ef5bc303850e46254e0ac51fc9ae5f0 718 SUPERFAMILY SSF52172 598 716 9.25E-26 T 11-10-2018 IPR011006 CheY-like superfamily SYN_02213 4ef5bc303850e46254e0ac51fc9ae5f0 718 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 212 328 1.7E-17 T 11-10-2018 IPR000014 PAS domain SYN_02213 4ef5bc303850e46254e0ac51fc9ae5f0 718 Gene3D G3DSA:3.30.565.10 411 590 3.0E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_02213 4ef5bc303850e46254e0ac51fc9ae5f0 718 Pfam PF00512 His Kinase A (phospho-acceptor) domain 345 408 3.5E-7 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_02886 1db606bfada238851b59d5130f4f4d9b 887 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 817 880 1.8E-12 T 11-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 SYN_02886 1db606bfada238851b59d5130f4f4d9b 887 Pfam PF08264 Anticodon-binding domain of tRNA 610 759 1.5E-50 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 SYN_02886 1db606bfada238851b59d5130f4f4d9b 887 SUPERFAMILY SSF47323 578 832 1.01E-75 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_02886 1db606bfada238851b59d5130f4f4d9b 887 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 19 566 6.0E-210 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_02886 1db606bfada238851b59d5130f4f4d9b 887 Hamap MF_02004 Valine--tRNA ligase [valS]. 6 882 15.867 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 SYN_02886 1db606bfada238851b59d5130f4f4d9b 887 Gene3D G3DSA:3.90.740.10 179 346 0.0 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 SYN_02886 1db606bfada238851b59d5130f4f4d9b 887 Gene3D G3DSA:1.10.730.10 6 744 0.0 T 11-10-2018 SYN_02886 1db606bfada238851b59d5130f4f4d9b 887 SUPERFAMILY SSF46589 817 880 1.46E-10 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 SYN_02886 1db606bfada238851b59d5130f4f4d9b 887 PRINTS PR00986 Valyl-tRNA synthetase signature 234 251 1.4E-37 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 SYN_02886 1db606bfada238851b59d5130f4f4d9b 887 PRINTS PR00986 Valyl-tRNA synthetase signature 478 496 1.4E-37 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 SYN_02886 1db606bfada238851b59d5130f4f4d9b 887 PRINTS PR00986 Valyl-tRNA synthetase signature 40 51 1.4E-37 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 SYN_02886 1db606bfada238851b59d5130f4f4d9b 887 PRINTS PR00986 Valyl-tRNA synthetase signature 349 362 1.4E-37 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 SYN_02886 1db606bfada238851b59d5130f4f4d9b 887 PRINTS PR00986 Valyl-tRNA synthetase signature 447 468 1.4E-37 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 SYN_02886 1db606bfada238851b59d5130f4f4d9b 887 Gene3D G3DSA:1.10.287.380 810 881 4.5E-15 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 SYN_02886 1db606bfada238851b59d5130f4f4d9b 887 TIGRFAM TIGR00422 valS: valine--tRNA ligase 7 864 0.0 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 SYN_02886 1db606bfada238851b59d5130f4f4d9b 887 SUPERFAMILY SSF50677 195 345 7.59E-60 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 SYN_02886 1db606bfada238851b59d5130f4f4d9b 887 SUPERFAMILY SSF52374 6 573 2.76E-147 T 11-10-2018 SYN_02886 1db606bfada238851b59d5130f4f4d9b 887 Gene3D G3DSA:3.40.50.620 26 527 0.0 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_02886 1db606bfada238851b59d5130f4f4d9b 887 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 47 58 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_00386 2e78a26c10db8557b8b40155bec99d5a 206 Pfam PF01865 Protein of unknown function DUF47 6 203 1.1E-23 T 11-10-2018 IPR018445 Putative phosphate transport regulator SYN_00386 2e78a26c10db8557b8b40155bec99d5a 206 Gene3D G3DSA:1.20.58.220 10 206 2.3E-64 T 11-10-2018 IPR038078 PhoU-like domain superfamily SYN_02157 8d8b11e219631e87c70bfc05945c8f49 401 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 119 130 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SYN_02157 8d8b11e219631e87c70bfc05945c8f49 401 TIGRFAM TIGR00032 argG: argininosuccinate synthase 7 400 1.9E-152 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SYN_02157 8d8b11e219631e87c70bfc05945c8f49 401 Gene3D G3DSA:3.90.1260.10 179 401 5.0E-103 T 11-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SYN_02157 8d8b11e219631e87c70bfc05945c8f49 401 Pfam PF00764 Arginosuccinate synthase 9 397 6.7E-162 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SYN_02157 8d8b11e219631e87c70bfc05945c8f49 401 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 11 19 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SYN_02157 8d8b11e219631e87c70bfc05945c8f49 401 SUPERFAMILY SSF52402 6 209 1.01E-47 T 11-10-2018 SYN_02157 8d8b11e219631e87c70bfc05945c8f49 401 Hamap MF_00005 Argininosuccinate synthase [argG]. 5 401 53.047 T 11-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SYN_02157 8d8b11e219631e87c70bfc05945c8f49 401 SUPERFAMILY SSF69864 176 399 3.92E-95 T 11-10-2018 SYN_02157 8d8b11e219631e87c70bfc05945c8f49 401 Gene3D G3DSA:3.40.50.620 6 178 4.1E-68 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_01852 fe9f326ca378be003acad2cc23fc938d 1178 Pfam PF00176 SNF2 family N-terminal domain 132 383 2.6E-18 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 SYN_01852 fe9f326ca378be003acad2cc23fc938d 1178 SUPERFAMILY SSF52540 104 306 4.61E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01852 fe9f326ca378be003acad2cc23fc938d 1178 SMART SM00487 107 318 4.7E-19 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain SYN_01852 fe9f326ca378be003acad2cc23fc938d 1178 Pfam PF00271 Helicase conserved C-terminal domain 505 611 3.1E-23 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_01852 fe9f326ca378be003acad2cc23fc938d 1178 Gene3D G3DSA:3.40.50.300 444 646 1.5E-42 T 11-10-2018 SYN_01852 fe9f326ca378be003acad2cc23fc938d 1178 Gene3D G3DSA:3.40.50.10810 108 417 7.6E-64 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily SYN_01852 fe9f326ca378be003acad2cc23fc938d 1178 SUPERFAMILY SSF52540 344 689 7.82E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01852 fe9f326ca378be003acad2cc23fc938d 1178 Pfam PF13020 Domain of unknown function (DUF3883) 1044 1135 1.0E-13 T 11-10-2018 IPR024975 Domain of unknown function DUF3883 SYN_01852 fe9f326ca378be003acad2cc23fc938d 1178 SMART SM00490 531 611 1.0E-24 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_02398 09adac8227438843fd5af2d26af99d13 453 SUPERFAMILY SSF56322 43 450 8.9E-94 T 11-10-2018 IPR005801 ADC synthase GO:0009058 SYN_02398 09adac8227438843fd5af2d26af99d13 453 Pfam PF00425 chorismate binding enzyme 189 442 6.3E-73 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal SYN_02398 09adac8227438843fd5af2d26af99d13 453 Hamap MF_01935 Isochorismate synthase MenF [menF]. 6 452 30.148 T 11-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 SYN_02398 09adac8227438843fd5af2d26af99d13 453 Gene3D G3DSA:3.60.120.10 18 453 1.0E-110 T 11-10-2018 IPR005801 ADC synthase GO:0009058 SYN_02398 09adac8227438843fd5af2d26af99d13 453 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 99 448 9.8E-102 T 11-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 SYN_02789 b3233914a5b366845f8cdfd3047ce209 514 SUPERFAMILY SSF56317 228 489 1.7E-48 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily SYN_02789 b3233914a5b366845f8cdfd3047ce209 514 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 63 460 3.8E-101 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 SYN_02789 b3233914a5b366845f8cdfd3047ce209 514 Pfam PF00795 Carbon-nitrogen hydrolase 233 476 8.9E-37 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 SYN_02789 b3233914a5b366845f8cdfd3047ce209 514 Gene3D G3DSA:3.60.110.10 250 485 9.0E-27 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily SYN_02789 b3233914a5b366845f8cdfd3047ce209 514 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 9 497 20.809 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 SYN_01026 4b5509a1424f4f9b57fe9fa7b40ac547 289 Pfam PF01694 Rhomboid family 105 243 2.9E-25 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 SYN_01026 4b5509a1424f4f9b57fe9fa7b40ac547 289 Gene3D G3DSA:1.20.1540.10 52 254 2.0E-29 T 11-10-2018 IPR035952 Rhomboid-like superfamily SYN_01026 4b5509a1424f4f9b57fe9fa7b40ac547 289 SUPERFAMILY SSF144091 54 242 1.96E-34 T 11-10-2018 SYN_01009 68180de71880d0088f0f81a2b3e81119 877 SUPERFAMILY SSF56784 321 717 5.1E-63 T 11-10-2018 IPR036412 HAD-like superfamily SYN_01009 68180de71880d0088f0f81a2b3e81119 877 SMART SM00831 2 75 1.7E-30 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 SYN_01009 68180de71880d0088f0f81a2b3e81119 877 SUPERFAMILY SSF81665 1 870 1.7E-141 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 SYN_01009 68180de71880d0088f0f81a2b3e81119 877 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 325 331 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 SYN_01009 68180de71880d0088f0f81a2b3e81119 877 Pfam PF00122 E1-E2 ATPase 110 302 8.0E-56 T 11-10-2018 SYN_01009 68180de71880d0088f0f81a2b3e81119 877 TIGRFAM TIGR01517 ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 6 857 1.4E-152 T 11-10-2018 IPR006408 P-type ATPase, subfamily IIB GO:0005388|GO:0005524|GO:0016020|GO:0070588 Reactome: R-HSA-418359|Reactome: R-HSA-5578775|Reactome: R-HSA-936837 SYN_01009 68180de71880d0088f0f81a2b3e81119 877 Gene3D G3DSA:1.20.1110.10 53 865 0.0 T 11-10-2018 SYN_01009 68180de71880d0088f0f81a2b3e81119 877 Pfam PF00702 haloacid dehalogenase-like hydrolase 321 626 6.8E-23 T 11-10-2018 SYN_01009 68180de71880d0088f0f81a2b3e81119 877 Gene3D G3DSA:2.70.150.10 19 226 0.0 T 11-10-2018 SYN_01009 68180de71880d0088f0f81a2b3e81119 877 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 644 669 1.1E-15 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SYN_01009 68180de71880d0088f0f81a2b3e81119 877 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 467 485 1.1E-15 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SYN_01009 68180de71880d0088f0f81a2b3e81119 877 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 584 600 1.1E-15 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SYN_01009 68180de71880d0088f0f81a2b3e81119 877 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 612 628 1.1E-15 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SYN_01009 68180de71880d0088f0f81a2b3e81119 877 SUPERFAMILY SSF81660 329 521 1.37E-43 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 SYN_01009 68180de71880d0088f0f81a2b3e81119 877 Pfam PF00690 Cation transporter/ATPase, N-terminus 3 70 6.7E-23 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 SYN_01009 68180de71880d0088f0f81a2b3e81119 877 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 323 337 2.2E-42 T 11-10-2018 SYN_01009 68180de71880d0088f0f81a2b3e81119 877 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 531 541 2.2E-42 T 11-10-2018 SYN_01009 68180de71880d0088f0f81a2b3e81119 877 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 509 520 2.2E-42 T 11-10-2018 SYN_01009 68180de71880d0088f0f81a2b3e81119 877 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 636 648 2.2E-42 T 11-10-2018 SYN_01009 68180de71880d0088f0f81a2b3e81119 877 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 160 174 2.2E-42 T 11-10-2018 SYN_01009 68180de71880d0088f0f81a2b3e81119 877 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 612 631 2.2E-42 T 11-10-2018 SYN_01009 68180de71880d0088f0f81a2b3e81119 877 Gene3D G3DSA:3.40.50.1000 320 657 0.0 T 11-10-2018 IPR023214 HAD superfamily SYN_01009 68180de71880d0088f0f81a2b3e81119 877 SUPERFAMILY SSF81653 113 223 1.7E-31 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 SYN_01009 68180de71880d0088f0f81a2b3e81119 877 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 211 345 9.3E-28 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SYN_01009 68180de71880d0088f0f81a2b3e81119 877 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 82 178 8.5E-21 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SYN_01009 68180de71880d0088f0f81a2b3e81119 877 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 583 702 1.9E-34 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SYN_01009 68180de71880d0088f0f81a2b3e81119 877 Gene3D G3DSA:3.40.1110.10 333 516 0.0 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 SYN_01009 68180de71880d0088f0f81a2b3e81119 877 Pfam PF00689 Cation transporting ATPase, C-terminus 696 866 1.2E-50 T 11-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 SYN_01549 f4fedbdcfba4e35095749cd5f8f8e139 554 Gene3D G3DSA:3.30.300.160 35 117 5.7E-5 T 11-10-2018 SYN_01549 f4fedbdcfba4e35095749cd5f8f8e139 554 SUPERFAMILY SSF160246 21 116 1.26E-8 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily SYN_01549 f4fedbdcfba4e35095749cd5f8f8e139 554 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 30 121 4.3E-9 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal SYN_01549 f4fedbdcfba4e35095749cd5f8f8e139 554 SMART SM00382 290 425 1.2E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01549 f4fedbdcfba4e35095749cd5f8f8e139 554 SUPERFAMILY SSF52540 149 537 3.62E-103 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01549 f4fedbdcfba4e35095749cd5f8f8e139 554 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 53 537 9.4E-201 T 11-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 SYN_01549 f4fedbdcfba4e35095749cd5f8f8e139 554 Pfam PF00437 Type II/IV secretion system protein 164 429 5.3E-84 T 11-10-2018 IPR001482 Type II/IV secretion system protein SYN_01549 f4fedbdcfba4e35095749cd5f8f8e139 554 Gene3D G3DSA:3.30.450.90 127 262 9.9E-51 T 11-10-2018 SYN_01549 f4fedbdcfba4e35095749cd5f8f8e139 554 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 357 371 - T 11-10-2018 IPR001482 Type II/IV secretion system protein SYN_01549 f4fedbdcfba4e35095749cd5f8f8e139 554 Gene3D G3DSA:3.40.50.300 263 545 5.7E-117 T 11-10-2018 SYN_02293 554cee329919fc20fbd4ac3516a4b943 479 Pfam PF17482 Phage tail sheath C-terminal domain 378 476 5.0E-16 T 11-10-2018 IPR020287 Tail sheath protein, C-terminal domain SYN_02293 554cee329919fc20fbd4ac3516a4b943 479 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 214 367 3.7E-16 T 11-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain SYN_02293 554cee329919fc20fbd4ac3516a4b943 479 PIRSF PIRSF007349 3 479 2.5E-169 T 11-10-2018 IPR007067 Tail sheath protein SYN_00981 e662745407dd20e253305777ea12f403 245 Gene3D G3DSA:1.10.10.10 143 245 3.9E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_00981 e662745407dd20e253305777ea12f403 245 SMART SM00448 15 128 2.2E-48 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00981 e662745407dd20e253305777ea12f403 245 SMART SM00862 165 241 3.4E-28 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SYN_00981 e662745407dd20e253305777ea12f403 245 Pfam PF00072 Response regulator receiver domain 17 129 2.2E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00981 e662745407dd20e253305777ea12f403 245 SUPERFAMILY SSF46894 139 242 1.02E-31 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SYN_00981 e662745407dd20e253305777ea12f403 245 Gene3D G3DSA:3.40.50.2300 5 142 4.2E-42 T 11-10-2018 SYN_00981 e662745407dd20e253305777ea12f403 245 SUPERFAMILY SSF52172 9 140 2.56E-46 T 11-10-2018 IPR011006 CheY-like superfamily SYN_00981 e662745407dd20e253305777ea12f403 245 Pfam PF00486 Transcriptional regulatory protein, C terminal 165 241 2.8E-29 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SYN_00473 b7031c9e0dc99dfea098f754e43eb5f5 141 SUPERFAMILY SSF111038 9 138 5.89E-48 T 11-10-2018 IPR035917 YjbQ-like superfamily SYN_00473 b7031c9e0dc99dfea098f754e43eb5f5 141 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 102 120 - T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 SYN_00473 b7031c9e0dc99dfea098f754e43eb5f5 141 PIRSF PIRSF004681 7 140 1.7E-44 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 SYN_00473 b7031c9e0dc99dfea098f754e43eb5f5 141 Pfam PF01894 Uncharacterised protein family UPF0047 24 137 2.0E-43 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 SYN_00473 b7031c9e0dc99dfea098f754e43eb5f5 141 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 12 137 6.1E-49 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 SYN_00473 b7031c9e0dc99dfea098f754e43eb5f5 141 Gene3D G3DSA:2.60.120.460 7 140 1.9E-52 T 11-10-2018 IPR035917 YjbQ-like superfamily SYN_01164 4da9ca14006c05ba97f36857e528b90d 336 Gene3D G3DSA:3.40.640.10 26 240 2.5E-67 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SYN_01164 4da9ca14006c05ba97f36857e528b90d 336 SUPERFAMILY SSF53383 15 330 9.99E-54 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SYN_01164 4da9ca14006c05ba97f36857e528b90d 336 Gene3D G3DSA:3.90.1150.10 15 323 2.5E-67 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SYN_01164 4da9ca14006c05ba97f36857e528b90d 336 Pfam PF00155 Aminotransferase class I and II 84 325 3.2E-30 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SYN_01906 de9043fc7e6b7ed1786284152b36a4d4 377 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 23 373 39.095 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 SYN_01906 de9043fc7e6b7ed1786284152b36a4d4 377 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 26 369 3.8E-130 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 SYN_01906 de9043fc7e6b7ed1786284152b36a4d4 377 SUPERFAMILY SSF49493 139 277 2.09E-19 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SYN_01906 de9043fc7e6b7ed1786284152b36a4d4 377 ProSitePatterns PS00636 Nt-dnaJ domain signature. 68 87 - T 11-10-2018 IPR018253 DnaJ domain, conserved site SYN_01906 de9043fc7e6b7ed1786284152b36a4d4 377 PRINTS PR00625 DnaJ domain signature 28 46 6.1E-31 T 11-10-2018 IPR001623 DnaJ domain SYN_01906 de9043fc7e6b7ed1786284152b36a4d4 377 PRINTS PR00625 DnaJ domain signature 46 61 6.1E-31 T 11-10-2018 IPR001623 DnaJ domain SYN_01906 de9043fc7e6b7ed1786284152b36a4d4 377 PRINTS PR00625 DnaJ domain signature 63 83 6.1E-31 T 11-10-2018 IPR001623 DnaJ domain SYN_01906 de9043fc7e6b7ed1786284152b36a4d4 377 PRINTS PR00625 DnaJ domain signature 83 102 6.1E-31 T 11-10-2018 IPR001623 DnaJ domain SYN_01906 de9043fc7e6b7ed1786284152b36a4d4 377 SUPERFAMILY SSF49493 279 364 1.31E-21 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SYN_01906 de9043fc7e6b7ed1786284152b36a4d4 377 Gene3D G3DSA:2.60.260.20 277 376 3.6E-28 T 11-10-2018 SYN_01906 de9043fc7e6b7ed1786284152b36a4d4 377 Gene3D G3DSA:2.10.230.10 165 231 9.5E-18 T 11-10-2018 SYN_01906 de9043fc7e6b7ed1786284152b36a4d4 377 SMART SM00271 25 83 4.8E-34 T 11-10-2018 IPR001623 DnaJ domain SYN_01906 de9043fc7e6b7ed1786284152b36a4d4 377 Gene3D G3DSA:1.10.287.110 22 133 5.8E-36 T 11-10-2018 IPR036869 Chaperone J-domain superfamily SYN_01906 de9043fc7e6b7ed1786284152b36a4d4 377 SUPERFAMILY SSF46565 21 124 8.37E-36 T 11-10-2018 IPR036869 Chaperone J-domain superfamily SYN_01906 de9043fc7e6b7ed1786284152b36a4d4 377 Pfam PF00684 DnaJ central domain 167 227 8.1E-10 T 11-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SYN_01906 de9043fc7e6b7ed1786284152b36a4d4 377 Pfam PF00226 DnaJ domain 26 88 1.2E-28 T 11-10-2018 IPR001623 DnaJ domain SYN_01906 de9043fc7e6b7ed1786284152b36a4d4 377 Pfam PF01556 DnaJ C terminal domain 141 353 8.7E-39 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal SYN_01906 de9043fc7e6b7ed1786284152b36a4d4 377 SUPERFAMILY SSF57938 154 230 1.14E-17 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 800 0.0 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 PRINTS PR00418 DNA topoisomerase II family signature 69 82 6.5E-72 T 11-10-2018 SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 PRINTS PR00418 DNA topoisomerase II family signature 522 534 6.5E-72 T 11-10-2018 SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 PRINTS PR00418 DNA topoisomerase II family signature 111 125 6.5E-72 T 11-10-2018 SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 PRINTS PR00418 DNA topoisomerase II family signature 502 519 6.5E-72 T 11-10-2018 SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 PRINTS PR00418 DNA topoisomerase II family signature 417 431 6.5E-72 T 11-10-2018 SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 PRINTS PR00418 DNA topoisomerase II family signature 484 500 6.5E-72 T 11-10-2018 SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 PRINTS PR00418 DNA topoisomerase II family signature 265 278 6.5E-72 T 11-10-2018 SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 PRINTS PR00418 DNA topoisomerase II family signature 34 49 6.5E-72 T 11-10-2018 SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 PRINTS PR00418 DNA topoisomerase II family signature 732 748 6.5E-72 T 11-10-2018 SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 Gene3D G3DSA:3.30.230.10 217 395 5.5E-75 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 SMART SM00387 30 173 1.3E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 Gene3D G3DSA:3.30.565.10 1 216 1.2E-89 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 Gene3D G3DSA:3.40.50.670 396 608 3.2E-75 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 Gene3D G3DSA:3.40.50.670 680 800 8.6E-27 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 728 788 2.0E-31 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 800 96.153 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 PRINTS PR01159 DNA gyrase subunit B signature 769 785 3.2E-76 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 PRINTS PR01159 DNA gyrase subunit B signature 309 325 3.2E-76 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 PRINTS PR01159 DNA gyrase subunit B signature 217 239 3.2E-76 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 PRINTS PR01159 DNA gyrase subunit B signature 371 391 3.2E-76 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 PRINTS PR01159 DNA gyrase subunit B signature 357 371 3.2E-76 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 PRINTS PR01159 DNA gyrase subunit B signature 178 193 3.2E-76 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 PRINTS PR01159 DNA gyrase subunit B signature 193 206 3.2E-76 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 PRINTS PR01159 DNA gyrase subunit B signature 5 15 3.2E-76 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 PRINTS PR01159 DNA gyrase subunit B signature 467 476 3.2E-76 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 PRINTS PR01159 DNA gyrase subunit B signature 753 765 3.2E-76 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 Pfam PF01751 Toprim domain 416 527 4.3E-17 T 11-10-2018 IPR006171 TOPRIM domain SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 SMART SM00433 34 793 3.7E-295 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 172 3.2E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 Pfam PF00204 DNA gyrase B 218 387 4.6E-64 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 SUPERFAMILY SSF55874 5 215 1.96E-69 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 SUPERFAMILY SSF54211 218 388 1.27E-60 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 ProSitePatterns PS00177 DNA topoisomerase II signature. 419 427 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 SYN_02049 a91d9f5a70a2e652eb597ed8ea406e5e 800 SUPERFAMILY SSF56719 391 791 4.45E-89 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 SYN_01445 a9a977dc55954edfae289dc838eb539a 157 Pfam PF03091 CutA1 divalent ion tolerance protein 58 151 9.5E-33 T 11-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 SYN_01445 a9a977dc55954edfae289dc838eb539a 157 SUPERFAMILY SSF54913 52 154 4.45E-34 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta SYN_01445 a9a977dc55954edfae289dc838eb539a 157 Gene3D G3DSA:3.30.70.120 37 157 3.5E-37 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SYN_01097 e5198ac6ee59d61fa02cf350947fb5b9 527 Pfam PF11984 Protein of unknown function (DUF3485) 322 523 6.9E-56 T 11-10-2018 IPR014263 Methanolan biosynthesis EpsI SYN_01097 e5198ac6ee59d61fa02cf350947fb5b9 527 TIGRFAM TIGR02602 8TM_EpsH: exosortase 44 274 4.7E-45 T 11-10-2018 IPR013426 Exosortase, EpsH-like SYN_01097 e5198ac6ee59d61fa02cf350947fb5b9 527 Pfam PF09721 Transmembrane exosortase (Exosortase_EpsH) 26 279 6.6E-64 T 11-10-2018 IPR019127 Exosortase SYN_01097 e5198ac6ee59d61fa02cf350947fb5b9 527 TIGRFAM TIGR04178 exo_archaeo: exosortase/archaeosortase family protein 186 281 2.4E-23 T 11-10-2018 IPR026392 Exosortase/Archaeosortase domain SYN_01097 e5198ac6ee59d61fa02cf350947fb5b9 527 TIGRFAM TIGR02914 EpsI_fam: EpsI family protein 351 525 1.7E-57 T 11-10-2018 IPR014263 Methanolan biosynthesis EpsI SYN_01097 e5198ac6ee59d61fa02cf350947fb5b9 527 TIGRFAM TIGR04152 exosort_VPLPA: exosortase D, VPLPA-CTERM-specific 41 526 1.2E-209 T 11-10-2018 IPR026491 Exosortase D, VPLPA-CTERM-specific SYN_02535 00acb9036a0d87245ef607bfafa21565 591 Pfam PF00152 tRNA synthetases class II (D, K and N) 128 565 9.2E-110 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_02535 00acb9036a0d87245ef607bfafa21565 591 Pfam PF02938 GAD domain 319 412 3.4E-26 T 11-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 SYN_02535 00acb9036a0d87245ef607bfafa21565 591 Pfam PF01336 OB-fold nucleic acid binding domain 26 111 7.0E-15 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SYN_02535 00acb9036a0d87245ef607bfafa21565 591 SUPERFAMILY SSF55261 300 426 6.87E-38 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 SYN_02535 00acb9036a0d87245ef607bfafa21565 591 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 9 591 34.714 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 SYN_02535 00acb9036a0d87245ef607bfafa21565 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 201 213 1.0E-25 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_02535 00acb9036a0d87245ef607bfafa21565 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 218 231 1.0E-25 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_02535 00acb9036a0d87245ef607bfafa21565 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 525 539 1.0E-25 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_02535 00acb9036a0d87245ef607bfafa21565 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 481 497 1.0E-25 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_02535 00acb9036a0d87245ef607bfafa21565 591 Gene3D G3DSA:2.40.50.140 3 114 9.0E-36 T 11-10-2018 SYN_02535 00acb9036a0d87245ef607bfafa21565 591 SUPERFAMILY SSF50249 10 114 3.05E-32 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_02535 00acb9036a0d87245ef607bfafa21565 591 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 9 589 2.3E-240 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 SYN_02535 00acb9036a0d87245ef607bfafa21565 591 Gene3D G3DSA:3.30.930.10 127 589 4.3E-192 T 11-10-2018 SYN_02535 00acb9036a0d87245ef607bfafa21565 591 Gene3D G3DSA:3.30.1360.30 283 426 4.3E-192 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 SYN_02535 00acb9036a0d87245ef607bfafa21565 591 SUPERFAMILY SSF55681 124 590 2.4E-102 T 11-10-2018 SYN_02695 f3574544dfcf286914e664510a58c24e 1048 Pfam PF10531 SLBB domain 416 442 4.1E-5 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02695 f3574544dfcf286914e664510a58c24e 1048 Pfam PF10531 SLBB domain 246 293 5.2E-10 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02695 f3574544dfcf286914e664510a58c24e 1048 Pfam PF10531 SLBB domain 786 830 1.1E-6 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02695 f3574544dfcf286914e664510a58c24e 1048 Pfam PF10531 SLBB domain 331 380 1.1E-7 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02695 f3574544dfcf286914e664510a58c24e 1048 Pfam PF10531 SLBB domain 692 742 1.8E-9 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02695 f3574544dfcf286914e664510a58c24e 1048 Pfam PF02563 Polysaccharide biosynthesis/export protein 167 228 3.6E-13 T 11-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 SYN_02695 f3574544dfcf286914e664510a58c24e 1048 Gene3D G3DSA:3.10.560.10 685 777 1.8E-14 T 11-10-2018 SYN_02695 f3574544dfcf286914e664510a58c24e 1048 Gene3D G3DSA:3.10.560.10 606 682 1.4E-7 T 11-10-2018 SYN_02695 f3574544dfcf286914e664510a58c24e 1048 Gene3D G3DSA:3.10.560.10 925 1016 1.9E-9 T 11-10-2018 SYN_02695 f3574544dfcf286914e664510a58c24e 1048 Gene3D G3DSA:3.10.560.10 237 324 1.1E-19 T 11-10-2018 SYN_02695 f3574544dfcf286914e664510a58c24e 1048 Gene3D G3DSA:3.10.560.10 329 406 4.1E-8 T 11-10-2018 SYN_02695 f3574544dfcf286914e664510a58c24e 1048 Gene3D G3DSA:3.10.560.10 407 499 5.8E-10 T 11-10-2018 SYN_02122 a932273998682947bb555a93b7289fda 483 Gene3D G3DSA:3.40.50.1100 137 451 9.5E-124 T 11-10-2018 SYN_02122 a932273998682947bb555a93b7289fda 483 Gene3D G3DSA:3.40.50.1100 119 445 9.5E-124 T 11-10-2018 SYN_02122 a932273998682947bb555a93b7289fda 483 Gene3D G3DSA:3.90.1380.10 23 117 1.2E-17 T 11-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily SYN_02122 a932273998682947bb555a93b7289fda 483 Pfam PF14821 Threonine synthase N terminus 45 114 2.2E-15 T 11-10-2018 IPR029144 Threonine synthase, N-terminal SYN_02122 a932273998682947bb555a93b7289fda 483 SUPERFAMILY SSF53686 44 479 1.63E-120 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme SYN_02122 a932273998682947bb555a93b7289fda 483 TIGRFAM TIGR00260 thrC: threonine synthase 97 444 2.9E-75 T 11-10-2018 IPR004450 Threonine synthase-like SYN_02122 a932273998682947bb555a93b7289fda 483 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 128 419 4.9E-22 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme SYN_02188 503c857b33d71fc12308a87850ae1d40 235 Gene3D G3DSA:3.40.50.300 12 235 2.2E-62 T 11-10-2018 SYN_02188 503c857b33d71fc12308a87850ae1d40 235 Pfam PF00406 Adenylate kinase 16 199 2.5E-40 T 11-10-2018 SYN_02188 503c857b33d71fc12308a87850ae1d40 235 SUPERFAMILY SSF52540 12 234 5.15E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02188 503c857b33d71fc12308a87850ae1d40 235 PRINTS PR00094 Adenylate kinase signature 179 194 1.5E-17 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 SYN_02188 503c857b33d71fc12308a87850ae1d40 235 PRINTS PR00094 Adenylate kinase signature 43 57 1.5E-17 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 SYN_02188 503c857b33d71fc12308a87850ae1d40 235 PRINTS PR00094 Adenylate kinase signature 15 28 1.5E-17 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 SYN_02188 503c857b33d71fc12308a87850ae1d40 235 PRINTS PR00094 Adenylate kinase signature 92 108 1.5E-17 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 SYN_02188 503c857b33d71fc12308a87850ae1d40 235 Hamap MF_00235 Adenylate kinase [adk]. 12 235 33.916 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 SYN_02188 503c857b33d71fc12308a87850ae1d40 235 ProSitePatterns PS00113 Adenylate kinase signature. 92 103 - T 11-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 SYN_02188 503c857b33d71fc12308a87850ae1d40 235 TIGRFAM TIGR01351 adk: adenylate kinase 13 234 7.9E-52 T 11-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 SYN_00465 e5fee0ccf81226a4dbf580d0a1b686cb 330 SUPERFAMILY SSF47364 25 104 9.87E-20 T 11-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 SYN_00465 e5fee0ccf81226a4dbf580d0a1b686cb 330 Pfam PF00448 SRP54-type protein, GTPase domain 127 325 2.0E-79 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SYN_00465 e5fee0ccf81226a4dbf580d0a1b686cb 330 SMART SM00962 125 326 2.5E-119 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SYN_00465 e5fee0ccf81226a4dbf580d0a1b686cb 330 Gene3D G3DSA:1.20.120.140 27 324 1.5E-112 T 11-10-2018 SYN_00465 e5fee0ccf81226a4dbf580d0a1b686cb 330 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 54 326 61.022 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 SYN_00465 e5fee0ccf81226a4dbf580d0a1b686cb 330 SMART SM00382 124 304 1.7E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00465 e5fee0ccf81226a4dbf580d0a1b686cb 330 Pfam PF02881 SRP54-type protein, helical bundle domain 50 105 7.4E-11 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SYN_00465 e5fee0ccf81226a4dbf580d0a1b686cb 330 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 299 312 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SYN_00465 e5fee0ccf81226a4dbf580d0a1b686cb 330 Gene3D G3DSA:3.40.50.300 115 314 1.5E-112 T 11-10-2018 SYN_00465 e5fee0ccf81226a4dbf580d0a1b686cb 330 SMART SM00963 30 111 5.0E-17 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SYN_00465 e5fee0ccf81226a4dbf580d0a1b686cb 330 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 55 325 1.2E-109 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 SYN_00465 e5fee0ccf81226a4dbf580d0a1b686cb 330 SUPERFAMILY SSF52540 77 327 4.43E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01500 060d089df54f809d123ca3d64fe6b606 337 Pfam PF13181 Tetratricopeptide repeat 122 148 0.0011 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01500 060d089df54f809d123ca3d64fe6b606 337 Gene3D G3DSA:3.30.70.2390 235 320 1.2E-6 T 11-10-2018 SYN_01500 060d089df54f809d123ca3d64fe6b606 337 SMART SM00028 52 85 4.3E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01500 060d089df54f809d123ca3d64fe6b606 337 SMART SM00028 86 119 2.4E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01500 060d089df54f809d123ca3d64fe6b606 337 SMART SM00028 120 153 0.014 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01500 060d089df54f809d123ca3d64fe6b606 337 Pfam PF13432 Tetratricopeptide repeat 56 119 1.0E-7 T 11-10-2018 SYN_01500 060d089df54f809d123ca3d64fe6b606 337 SUPERFAMILY SSF48452 50 180 3.14E-25 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_01500 060d089df54f809d123ca3d64fe6b606 337 Gene3D G3DSA:1.25.40.10 35 211 2.4E-26 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_01500 060d089df54f809d123ca3d64fe6b606 337 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 236 324 9.7E-13 T 11-10-2018 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain SYN_02588 1d2ca1171ce11a1404db6a96da43d116 216 Pfam PF00072 Response regulator receiver domain 6 117 3.4E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_02588 1d2ca1171ce11a1404db6a96da43d116 216 SMART SM00448 4 117 7.6E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_02588 1d2ca1171ce11a1404db6a96da43d116 216 SUPERFAMILY SSF46894 147 211 7.14E-17 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SYN_02588 1d2ca1171ce11a1404db6a96da43d116 216 SMART SM00421 151 208 3.4E-17 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_02588 1d2ca1171ce11a1404db6a96da43d116 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 7.0E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_02588 1d2ca1171ce11a1404db6a96da43d116 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 7.0E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_02588 1d2ca1171ce11a1404db6a96da43d116 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 7.0E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_02588 1d2ca1171ce11a1404db6a96da43d116 216 Gene3D G3DSA:3.40.50.12740 5 212 7.7E-55 T 11-10-2018 SYN_02588 1d2ca1171ce11a1404db6a96da43d116 216 SUPERFAMILY SSF52172 3 134 1.71E-32 T 11-10-2018 IPR011006 CheY-like superfamily SYN_02588 1d2ca1171ce11a1404db6a96da43d116 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_02588 1d2ca1171ce11a1404db6a96da43d116 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 208 8.3E-16 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_00038 e6d92f780e774a72497b95d3540a24cd 376 Pfam PF01702 Queuine tRNA-ribosyltransferase 135 367 1.7E-85 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 SYN_00038 e6d92f780e774a72497b95d3540a24cd 376 SUPERFAMILY SSF51713 7 369 3.01E-153 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 SYN_00038 e6d92f780e774a72497b95d3540a24cd 376 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 17 370 8.2E-157 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 SYN_00038 e6d92f780e774a72497b95d3540a24cd 376 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 9 370 1.3E-151 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 SYN_00038 e6d92f780e774a72497b95d3540a24cd 376 Gene3D G3DSA:3.20.20.105 3 374 4.8E-163 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 SYN_00038 e6d92f780e774a72497b95d3540a24cd 376 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 6 370 53.554 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 SYN_02102 1744d5bae72c863586718d3af210f3f4 92 Pfam PF00137 ATP synthase subunit C 15 76 7.3E-16 T 11-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 SYN_02102 1744d5bae72c863586718d3af210f3f4 92 Gene3D G3DSA:1.20.20.10 5 83 5.5E-27 T 11-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02102 1744d5bae72c863586718d3af210f3f4 92 PRINTS PR00124 ATP synthase C subunit signature 35 50 1.9E-12 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02102 1744d5bae72c863586718d3af210f3f4 92 PRINTS PR00124 ATP synthase C subunit signature 52 77 1.9E-12 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02102 1744d5bae72c863586718d3af210f3f4 92 PRINTS PR00124 ATP synthase C subunit signature 14 33 1.9E-12 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02102 1744d5bae72c863586718d3af210f3f4 92 TIGRFAM TIGR03322 alt_F1F0_F0_C: alternate F1F0 ATPase, F0 subunit C 2 87 1.8E-51 T 11-10-2018 IPR017708 Alternate ATP synthase, F0 complex, subunit C, bacterial/archaeal SYN_02102 1744d5bae72c863586718d3af210f3f4 92 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 23 79 5.3E-14 T 11-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SYN_02102 1744d5bae72c863586718d3af210f3f4 92 SUPERFAMILY SSF81333 4 81 3.01E-18 T 11-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily SYN_02102 1744d5bae72c863586718d3af210f3f4 92 Hamap MF_01396 ATP synthase subunit c [atpH]. 12 77 13.56 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02388 c6609a90e1baac3f29feffea1afeb860 301 Pfam PF01545 Cation efflux family 16 207 1.2E-42 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SYN_02388 c6609a90e1baac3f29feffea1afeb860 301 Pfam PF16916 Dimerisation domain of Zinc Transporter 212 288 2.6E-20 T 11-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain SYN_02388 c6609a90e1baac3f29feffea1afeb860 301 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 290 1.0E-70 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SYN_02388 c6609a90e1baac3f29feffea1afeb860 301 Gene3D G3DSA:1.20.1510.10 10 207 9.9E-56 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily SYN_02388 c6609a90e1baac3f29feffea1afeb860 301 SUPERFAMILY SSF160240 211 290 4.05E-17 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 SYN_02388 c6609a90e1baac3f29feffea1afeb860 301 Gene3D G3DSA:3.30.70.1350 208 290 5.4E-19 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 SYN_02388 c6609a90e1baac3f29feffea1afeb860 301 SUPERFAMILY SSF161111 10 208 8.37E-52 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily SYN_01434 cda866b9265d6472d7931b0977a0f987 406 PIRSF PIRSF015658 9 406 1.2E-68 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 SYN_01434 cda866b9265d6472d7931b0977a0f987 406 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 32 404 1.1E-102 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 SYN_02530 fb124aad0e0d5dac25ea17e18a55e983 456 Gene3D G3DSA:3.40.50.2300 3 121 1.0E-38 T 11-10-2018 SYN_02530 fb124aad0e0d5dac25ea17e18a55e983 456 SUPERFAMILY SSF46689 356 455 3.32E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SYN_02530 fb124aad0e0d5dac25ea17e18a55e983 456 Gene3D G3DSA:1.10.8.60 313 379 1.8E-24 T 11-10-2018 SYN_02530 fb124aad0e0d5dac25ea17e18a55e983 456 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 436 1.8E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_02530 fb124aad0e0d5dac25ea17e18a55e983 456 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 436 456 1.8E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_02530 fb124aad0e0d5dac25ea17e18a55e983 456 Pfam PF00158 Sigma-54 interaction domain 142 308 1.4E-71 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SYN_02530 fb124aad0e0d5dac25ea17e18a55e983 456 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SYN_02530 fb124aad0e0d5dac25ea17e18a55e983 456 SMART SM00448 2 113 6.0E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_02530 fb124aad0e0d5dac25ea17e18a55e983 456 Gene3D G3DSA:1.10.10.60 380 456 1.4E-13 T 11-10-2018 SYN_02530 fb124aad0e0d5dac25ea17e18a55e983 456 Pfam PF00072 Response regulator receiver domain 4 113 1.9E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_02530 fb124aad0e0d5dac25ea17e18a55e983 456 Gene3D G3DSA:3.40.50.300 130 312 1.6E-68 T 11-10-2018 SYN_02530 fb124aad0e0d5dac25ea17e18a55e983 456 SUPERFAMILY SSF52172 1 187 1.99E-43 T 11-10-2018 IPR011006 CheY-like superfamily SYN_02530 fb124aad0e0d5dac25ea17e18a55e983 456 SUPERFAMILY SSF52540 141 383 1.8E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02530 fb124aad0e0d5dac25ea17e18a55e983 456 Pfam PF02954 Bacterial regulatory protein, Fis family 413 453 6.7E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_02530 fb124aad0e0d5dac25ea17e18a55e983 456 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site SYN_02530 fb124aad0e0d5dac25ea17e18a55e983 456 SMART SM00382 162 305 1.6E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00745 3d41086fcac14582c4455b741fcb2022 271 SUPERFAMILY SSF52540 27 247 7.01E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00745 3d41086fcac14582c4455b741fcb2022 271 Pfam PF00005 ABC transporter 48 192 2.6E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_00745 3d41086fcac14582c4455b741fcb2022 271 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_00745 3d41086fcac14582c4455b741fcb2022 271 Gene3D G3DSA:3.40.50.300 25 270 2.8E-62 T 11-10-2018 SYN_00745 3d41086fcac14582c4455b741fcb2022 271 SMART SM00382 56 249 2.6E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00070 e287cc75c693e7b4ffd77405935c8b89 176 PRINTS PR00338 Transcription termination factor NUSG signature 152 168 1.5E-19 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 SYN_00070 e287cc75c693e7b4ffd77405935c8b89 176 PRINTS PR00338 Transcription termination factor NUSG signature 134 149 1.5E-19 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 SYN_00070 e287cc75c693e7b4ffd77405935c8b89 176 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 1.5E-19 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 SYN_00070 e287cc75c693e7b4ffd77405935c8b89 176 SUPERFAMILY SSF82679 3 113 6.28E-39 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 SYN_00070 e287cc75c693e7b4ffd77405935c8b89 176 Gene3D G3DSA:3.30.70.940 1 116 3.5E-43 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 SYN_00070 e287cc75c693e7b4ffd77405935c8b89 176 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 173 3.3E-65 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 SYN_00070 e287cc75c693e7b4ffd77405935c8b89 176 SUPERFAMILY SSF50104 120 173 9.03E-18 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily SYN_00070 e287cc75c693e7b4ffd77405935c8b89 176 SMART SM00739 122 149 2.3E-4 T 11-10-2018 IPR005824 KOW SYN_00070 e287cc75c693e7b4ffd77405935c8b89 176 ProSitePatterns PS01014 Transcription termination factor nusG signature. 159 168 - T 11-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site SYN_00070 e287cc75c693e7b4ffd77405935c8b89 176 Pfam PF02357 Transcription termination factor nusG 4 105 6.4E-27 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 SYN_00070 e287cc75c693e7b4ffd77405935c8b89 176 Pfam PF00467 KOW motif 125 159 9.1E-6 T 11-10-2018 IPR005824 KOW SYN_00070 e287cc75c693e7b4ffd77405935c8b89 176 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 176 24.154 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 SYN_00070 e287cc75c693e7b4ffd77405935c8b89 176 Gene3D G3DSA:2.30.30.30 117 175 2.6E-24 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 SYN_00070 e287cc75c693e7b4ffd77405935c8b89 176 SMART SM00738 2 110 7.5E-45 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 SYN_02885 308b7cd33e1c7ea914dc424f9da73502 283 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 14 277 4.1E-100 T 11-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 SYN_02885 308b7cd33e1c7ea914dc424f9da73502 283 Gene3D G3DSA:3.90.1170.20 17 277 2.2E-110 T 11-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 SYN_02885 308b7cd33e1c7ea914dc424f9da73502 283 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 113 277 2.3E-66 T 11-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 SYN_02885 308b7cd33e1c7ea914dc424f9da73502 283 PIRSF PIRSF006250 6 282 9.6E-94 T 11-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 SYN_02885 308b7cd33e1c7ea914dc424f9da73502 283 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 22 111 9.7E-24 T 11-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 SYN_02885 308b7cd33e1c7ea914dc424f9da73502 283 SUPERFAMILY SSF51690 113 277 1.02E-61 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 SYN_02885 308b7cd33e1c7ea914dc424f9da73502 283 Gene3D G3DSA:3.20.20.70 127 269 2.2E-110 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_02885 308b7cd33e1c7ea914dc424f9da73502 283 SUPERFAMILY SSF54675 3 112 1.1E-26 T 11-10-2018 SYN_00623 d20db40105e5c18ef6b8aba1e7507218 208 Gene3D G3DSA:3.40.50.620 19 207 1.6E-34 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_00623 d20db40105e5c18ef6b8aba1e7507218 208 SUPERFAMILY SSF52374 22 196 1.41E-17 T 11-10-2018 SYN_02835 1aa00ecf47c94e27607bb9fb092e33b1 262 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 65 261 1.2E-87 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SYN_02835 1aa00ecf47c94e27607bb9fb092e33b1 262 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 190 205 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SYN_02835 1aa00ecf47c94e27607bb9fb092e33b1 262 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 61 70 3.0E-24 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SYN_02835 1aa00ecf47c94e27607bb9fb092e33b1 262 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 161 173 3.0E-24 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SYN_02835 1aa00ecf47c94e27607bb9fb092e33b1 262 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 121 133 3.0E-24 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SYN_02835 1aa00ecf47c94e27607bb9fb092e33b1 262 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 183 195 3.0E-24 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SYN_02835 1aa00ecf47c94e27607bb9fb092e33b1 262 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 251 261 3.0E-24 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SYN_02835 1aa00ecf47c94e27607bb9fb092e33b1 262 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 133 147 3.0E-24 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 SYN_02835 1aa00ecf47c94e27607bb9fb092e33b1 262 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 238 250 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SYN_02835 1aa00ecf47c94e27607bb9fb092e33b1 262 Pfam PF00813 FliP family 65 257 3.9E-81 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SYN_02835 1aa00ecf47c94e27607bb9fb092e33b1 262 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 190 210 2.8E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SYN_02835 1aa00ecf47c94e27607bb9fb092e33b1 262 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 235 260 2.8E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SYN_02835 1aa00ecf47c94e27607bb9fb092e33b1 262 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 82 102 2.8E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SYN_02835 1aa00ecf47c94e27607bb9fb092e33b1 262 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 211 232 2.8E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SYN_02835 1aa00ecf47c94e27607bb9fb092e33b1 262 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 102 121 2.8E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SYN_02835 1aa00ecf47c94e27607bb9fb092e33b1 262 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 63 82 2.8E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 SYN_02098 5b93c382736b5873b0d19f6f01aea191 130 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 3 81 1.8E-18 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02098 5b93c382736b5873b0d19f6f01aea191 130 SUPERFAMILY SSF51344 2 83 2.75E-17 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02098 5b93c382736b5873b0d19f6f01aea191 130 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 1 117 10.377 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02098 5b93c382736b5873b0d19f6f01aea191 130 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 18 87 5.0E-7 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02098 5b93c382736b5873b0d19f6f01aea191 130 Gene3D G3DSA:2.60.15.10 1 127 2.0E-19 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02098 5b93c382736b5873b0d19f6f01aea191 130 TIGRFAM TIGR03166 alt_F1F0_F1_eps: alternate F1F0 ATPase, F1 subunit epsilon 3 123 1.7E-37 T 11-10-2018 IPR024037 Alternate ATP synthase, F1 complex, subunit epsilon SYN_02378 7f27f66c4c641a0d2f7ef2fda5c7b91b 768 SMART SM00382 494 630 1.5E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_02378 7f27f66c4c641a0d2f7ef2fda5c7b91b 768 SMART SM00382 213 358 9.4E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_02378 7f27f66c4c641a0d2f7ef2fda5c7b91b 768 SUPERFAMILY SSF81923 3 139 7.85E-43 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 SYN_02378 7f27f66c4c641a0d2f7ef2fda5c7b91b 768 SUPERFAMILY SSF52540 173 431 2.12E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02378 7f27f66c4c641a0d2f7ef2fda5c7b91b 768 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 740 0.0 T 11-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 SYN_02378 7f27f66c4c641a0d2f7ef2fda5c7b91b 768 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 308 320 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 SYN_02378 7f27f66c4c641a0d2f7ef2fda5c7b91b 768 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 661 739 2.1E-19 T 11-10-2018 IPR019489 Clp ATPase, C-terminal SYN_02378 7f27f66c4c641a0d2f7ef2fda5c7b91b 768 Gene3D G3DSA:1.10.8.60 362 445 3.9E-31 T 11-10-2018 SYN_02378 7f27f66c4c641a0d2f7ef2fda5c7b91b 768 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 525 543 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 SYN_02378 7f27f66c4c641a0d2f7ef2fda5c7b91b 768 SMART SM01086 661 750 6.3E-24 T 11-10-2018 IPR019489 Clp ATPase, C-terminal SYN_02378 7f27f66c4c641a0d2f7ef2fda5c7b91b 768 Gene3D G3DSA:1.10.1780.10 2 140 9.0E-32 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 SYN_02378 7f27f66c4c641a0d2f7ef2fda5c7b91b 768 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 602 616 1.6E-37 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 SYN_02378 7f27f66c4c641a0d2f7ef2fda5c7b91b 768 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 569 587 1.6E-37 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 SYN_02378 7f27f66c4c641a0d2f7ef2fda5c7b91b 768 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 498 516 1.6E-37 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 SYN_02378 7f27f66c4c641a0d2f7ef2fda5c7b91b 768 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 540 558 1.6E-37 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 SYN_02378 7f27f66c4c641a0d2f7ef2fda5c7b91b 768 Gene3D G3DSA:1.10.8.60 661 764 2.4E-24 T 11-10-2018 SYN_02378 7f27f66c4c641a0d2f7ef2fda5c7b91b 768 Gene3D G3DSA:3.40.50.300 446 660 6.1E-76 T 11-10-2018 SYN_02378 7f27f66c4c641a0d2f7ef2fda5c7b91b 768 Pfam PF07724 AAA domain (Cdc48 subfamily) 493 654 3.1E-43 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 SYN_02378 7f27f66c4c641a0d2f7ef2fda5c7b91b 768 Gene3D G3DSA:3.40.50.300 171 361 3.9E-63 T 11-10-2018 SYN_02378 7f27f66c4c641a0d2f7ef2fda5c7b91b 768 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 14 62 1.3E-10 T 11-10-2018 IPR004176 Clp, N-terminal SYN_02378 7f27f66c4c641a0d2f7ef2fda5c7b91b 768 SUPERFAMILY SSF52540 443 744 3.23E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02378 7f27f66c4c641a0d2f7ef2fda5c7b91b 768 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 218 320 9.9E-11 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 SYN_00141 34ff1402135f24c70d51357f3ef7c9c5 410 SUPERFAMILY SSF53639 222 407 8.04E-21 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily SYN_00141 34ff1402135f24c70d51357f3ef7c9c5 410 SMART SM01007 226 406 1.0E-21 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal SYN_00141 34ff1402135f24c70d51357f3ef7c9c5 410 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 231 403 5.7E-15 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal SYN_00141 34ff1402135f24c70d51357f3ef7c9c5 410 Gene3D G3DSA:3.40.225.10 221 410 8.4E-27 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily SYN_01113 79fbe9b370933671f9e9ed2ae32d8ad0 428 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 7 410 6.5E-117 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 SYN_01113 79fbe9b370933671f9e9ed2ae32d8ad0 428 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 7 178 7.6E-34 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 SYN_01113 79fbe9b370933671f9e9ed2ae32d8ad0 428 Gene3D G3DSA:3.40.50.720 2 194 1.2E-59 T 11-10-2018 SYN_01113 79fbe9b370933671f9e9ed2ae32d8ad0 428 SMART SM00984 315 415 9.7E-35 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 SYN_01113 79fbe9b370933671f9e9ed2ae32d8ad0 428 Gene3D G3DSA:3.40.50.720 198 427 1.6E-56 T 11-10-2018 SYN_01113 79fbe9b370933671f9e9ed2ae32d8ad0 428 SUPERFAMILY SSF51735 7 190 4.96E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_01113 79fbe9b370933671f9e9ed2ae32d8ad0 428 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 200 288 5.0E-22 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 SYN_01113 79fbe9b370933671f9e9ed2ae32d8ad0 428 SUPERFAMILY SSF48179 199 290 1.09E-23 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 SYN_01113 79fbe9b370933671f9e9ed2ae32d8ad0 428 PIRSF PIRSF000124 5 428 4.5E-55 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 SYN_01113 79fbe9b370933671f9e9ed2ae32d8ad0 428 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 315 415 2.7E-21 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 SYN_01113 79fbe9b370933671f9e9ed2ae32d8ad0 428 SUPERFAMILY SSF52413 306 426 1.23E-26 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 SYN_01113 79fbe9b370933671f9e9ed2ae32d8ad0 428 PIRSF PIRSF500136 1 428 1.4E-145 T 11-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 SYN_01256 ff326197fa844cd7276965862feaa3d1 372 SUPERFAMILY SSF52402 20 259 1.7E-56 T 11-10-2018 SYN_01256 ff326197fa844cd7276965862feaa3d1 372 Gene3D G3DSA:2.30.30.280 230 290 3.6E-19 T 11-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 SYN_01256 ff326197fa844cd7276965862feaa3d1 372 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 21 365 39.959 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 SYN_01256 ff326197fa844cd7276965862feaa3d1 372 Gene3D G3DSA:2.40.30.10 291 371 3.2E-23 T 11-10-2018 SYN_01256 ff326197fa844cd7276965862feaa3d1 372 Gene3D G3DSA:3.40.50.620 8 227 6.0E-79 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_01256 ff326197fa844cd7276965862feaa3d1 372 Pfam PF03054 tRNA methyl transferase 21 364 7.5E-117 T 11-10-2018 SYN_01256 ff326197fa844cd7276965862feaa3d1 372 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 21 364 1.2E-105 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 SYN_00077 e265336821f7e1960ada26bf48297629 329 Gene3D G3DSA:3.40.190.10 116 267 7.6E-112 T 11-10-2018 SYN_00077 e265336821f7e1960ada26bf48297629 329 SUPERFAMILY SSF53850 32 313 1.36E-54 T 11-10-2018 SYN_00077 e265336821f7e1960ada26bf48297629 329 Pfam PF13531 Bacterial extracellular solute-binding protein 38 290 7.1E-34 T 11-10-2018 SYN_00077 e265336821f7e1960ada26bf48297629 329 Gene3D G3DSA:3.40.190.10 36 322 7.6E-112 T 11-10-2018 SYN_00077 e265336821f7e1960ada26bf48297629 329 TIGRFAM TIGR03730 tungstate_WtpA: tungstate ABC transporter binding protein WtpA 34 285 5.6E-115 T 11-10-2018 IPR022498 Tungstate ABC transporter, substrate-binding protein WtpA GO:1901359 SYN_02830 1a225cca716fb5a4a1907143dcefc331 691 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 73 92 1.4E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SYN_02830 1a225cca716fb5a4a1907143dcefc331 691 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 189 206 1.4E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SYN_02830 1a225cca716fb5a4a1907143dcefc331 691 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 240 254 1.4E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SYN_02830 1a225cca716fb5a4a1907143dcefc331 691 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 159 177 1.4E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SYN_02830 1a225cca716fb5a4a1907143dcefc331 691 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 36 49 1.4E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SYN_02830 1a225cca716fb5a4a1907143dcefc331 691 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 140 156 1.4E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SYN_02830 1a225cca716fb5a4a1907143dcefc331 691 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 18 689 1.5E-275 T 11-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 SYN_02830 1a225cca716fb5a4a1907143dcefc331 691 Gene3D G3DSA:1.10.490.80 591 689 1.7E-22 T 11-10-2018 SYN_02830 1a225cca716fb5a4a1907143dcefc331 691 Pfam PF00771 FHIPEP family 29 680 4.1E-273 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SYN_02830 1a225cca716fb5a4a1907143dcefc331 691 Gene3D G3DSA:3.40.30.60 356 499 5.1E-55 T 11-10-2018 SYN_02830 1a225cca716fb5a4a1907143dcefc331 691 Gene3D G3DSA:1.10.8.540 500 589 1.8E-29 T 11-10-2018 SYN_02830 1a225cca716fb5a4a1907143dcefc331 691 PIRSF PIRSF005419 2 691 1.2E-263 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 SYN_02830 1a225cca716fb5a4a1907143dcefc331 691 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 145 168 - T 11-10-2018 IPR025505 FHIPEP conserved site SYN_02264 21802a0f4e01dfd1bb3a313d81b7d626 553 Gene3D G3DSA:3.90.780.10 344 551 5.2E-54 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 SYN_02264 21802a0f4e01dfd1bb3a313d81b7d626 553 Pfam PF00149 Calcineurin-like phosphoesterase 65 270 1.0E-11 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 SYN_02264 21802a0f4e01dfd1bb3a313d81b7d626 553 PRINTS PR01607 Apyrase family signature 234 251 1.4E-27 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 SYN_02264 21802a0f4e01dfd1bb3a313d81b7d626 553 PRINTS PR01607 Apyrase family signature 469 488 1.4E-27 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 SYN_02264 21802a0f4e01dfd1bb3a313d81b7d626 553 PRINTS PR01607 Apyrase family signature 63 81 1.4E-27 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 SYN_02264 21802a0f4e01dfd1bb3a313d81b7d626 553 PRINTS PR01607 Apyrase family signature 253 276 1.4E-27 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 SYN_02264 21802a0f4e01dfd1bb3a313d81b7d626 553 PRINTS PR01607 Apyrase family signature 396 419 1.4E-27 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 SYN_02264 21802a0f4e01dfd1bb3a313d81b7d626 553 PRINTS PR01607 Apyrase family signature 281 301 1.4E-27 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 SYN_02264 21802a0f4e01dfd1bb3a313d81b7d626 553 SUPERFAMILY SSF56300 60 342 7.93E-82 T 11-10-2018 SYN_02264 21802a0f4e01dfd1bb3a313d81b7d626 553 Gene3D G3DSA:3.60.21.10 59 342 2.3E-84 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like SYN_02264 21802a0f4e01dfd1bb3a313d81b7d626 553 Pfam PF02872 5'-nucleotidase, C-terminal domain 344 495 4.9E-47 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 SYN_02264 21802a0f4e01dfd1bb3a313d81b7d626 553 SUPERFAMILY SSF55816 341 548 5.36E-54 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 SYN_02748 289a666a22c8491075528c1d54034b87 1165 SUPERFAMILY SSF52540 67 341 3.9E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01800 21f4b6b85395f02058d499b674606fee 333 SUPERFAMILY SSF55174 19 106 1.33E-10 T 11-10-2018 SYN_01800 21f4b6b85395f02058d499b674606fee 333 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 318 6.4E-95 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SYN_01800 21f4b6b85395f02058d499b674606fee 333 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 139 153 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SYN_01800 21f4b6b85395f02058d499b674606fee 333 SMART SM00363 19 84 2.9E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_01800 21f4b6b85395f02058d499b674606fee 333 SUPERFAMILY SSF55120 78 320 4.93E-77 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 SYN_01800 21f4b6b85395f02058d499b674606fee 333 Gene3D G3DSA:3.10.290.10 8 71 8.8E-17 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 SYN_01800 21f4b6b85395f02058d499b674606fee 333 Gene3D G3DSA:3.30.2350.10 86 322 2.1E-78 T 11-10-2018 SYN_01800 21f4b6b85395f02058d499b674606fee 333 Pfam PF00849 RNA pseudouridylate synthase 93 248 2.2E-35 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SYN_01800 21f4b6b85395f02058d499b674606fee 333 Pfam PF01479 S4 domain 20 66 4.5E-6 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00521 d83d86e1c2ebbabc59ee270c6cce94fa 993 SUPERFAMILY SSF56042 820 993 2.09E-42 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily SYN_00521 d83d86e1c2ebbabc59ee270c6cce94fa 993 Gene3D G3DSA:3.90.650.10 430 612 5.9E-51 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily SYN_00521 d83d86e1c2ebbabc59ee270c6cce94fa 993 Pfam PF00586 AIR synthase related protein, N-terminal domain 300 423 5.4E-9 T 11-10-2018 IPR016188 PurM-like, N-terminal domain SYN_00521 d83d86e1c2ebbabc59ee270c6cce94fa 993 Pfam PF00586 AIR synthase related protein, N-terminal domain 679 794 0.0013 T 11-10-2018 IPR016188 PurM-like, N-terminal domain SYN_00521 d83d86e1c2ebbabc59ee270c6cce94fa 993 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 163 993 213.84 T 11-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 SYN_00521 d83d86e1c2ebbabc59ee270c6cce94fa 993 SUPERFAMILY SSF55326 232 426 6.63E-36 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily SYN_00521 d83d86e1c2ebbabc59ee270c6cce94fa 993 Gene3D G3DSA:3.90.650.10 817 993 3.4E-46 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily SYN_00521 d83d86e1c2ebbabc59ee270c6cce94fa 993 SUPERFAMILY SSF56042 438 656 4.04E-49 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily SYN_00521 d83d86e1c2ebbabc59ee270c6cce94fa 993 SUPERFAMILY SSF82697 2 71 1.74E-6 T 11-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SYN_00521 d83d86e1c2ebbabc59ee270c6cce94fa 993 Gene3D G3DSA:3.30.1330.10 242 427 3.3E-48 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily SYN_00521 d83d86e1c2ebbabc59ee270c6cce94fa 993 SUPERFAMILY SSF82697 79 152 7.15E-5 T 11-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SYN_00521 d83d86e1c2ebbabc59ee270c6cce94fa 993 Pfam PF02769 AIR synthase related protein, C-terminal domain 823 965 5.4E-22 T 11-10-2018 IPR010918 PurM-like, C-terminal domain SYN_00521 d83d86e1c2ebbabc59ee270c6cce94fa 993 Pfam PF02769 AIR synthase related protein, C-terminal domain 439 585 1.8E-23 T 11-10-2018 IPR010918 PurM-like, C-terminal domain SYN_00521 d83d86e1c2ebbabc59ee270c6cce94fa 993 SUPERFAMILY SSF55326 620 818 3.27E-51 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily SYN_00521 d83d86e1c2ebbabc59ee270c6cce94fa 993 Gene3D G3DSA:3.30.1330.10 622 814 2.7E-49 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily SYN_00064 cabb1d96963586d1c8a992ceb4d1eb94 1363 Gene3D G3DSA:2.40.50.100 716 795 1.4E-31 T 11-10-2018 SYN_00064 cabb1d96963586d1c8a992ceb4d1eb94 1363 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 6 1362 12.428 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_00064 cabb1d96963586d1c8a992ceb4d1eb94 1363 Gene3D G3DSA:3.90.1100.10 11 172 3.3E-57 T 11-10-2018 SYN_00064 cabb1d96963586d1c8a992ceb4d1eb94 1363 Gene3D G3DSA:3.90.1100.10 644 715 8.4E-21 T 11-10-2018 SYN_00064 cabb1d96963586d1c8a992ceb4d1eb94 1363 Gene3D G3DSA:3.90.1100.10 361 625 3.4E-72 T 11-10-2018 SYN_00064 cabb1d96963586d1c8a992ceb4d1eb94 1363 Gene3D G3DSA:3.90.1800.10 1272 1325 1.6E-9 T 11-10-2018 SYN_00064 cabb1d96963586d1c8a992ceb4d1eb94 1363 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 5 1359 0.0 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_00064 cabb1d96963586d1c8a992ceb4d1eb94 1363 Pfam PF04563 RNA polymerase beta subunit 19 501 2.7E-32 T 11-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_00064 cabb1d96963586d1c8a992ceb4d1eb94 1363 Gene3D G3DSA:2.40.50.150 835 960 9.2E-47 T 11-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_00064 cabb1d96963586d1c8a992ceb4d1eb94 1363 Gene3D G3DSA:2.40.270.10 796 834 9.1E-6 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_00064 cabb1d96963586d1c8a992ceb4d1eb94 1363 SUPERFAMILY SSF64484 5 1362 0.0 T 11-10-2018 SYN_00064 cabb1d96963586d1c8a992ceb4d1eb94 1363 Pfam PF04560 RNA polymerase Rpb2, domain 7 1286 1360 3.1E-25 T 11-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_00064 cabb1d96963586d1c8a992ceb4d1eb94 1363 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1086 1098 - T 11-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_00064 cabb1d96963586d1c8a992ceb4d1eb94 1363 Pfam PF10385 RNA polymerase beta subunit external 1 domain 593 658 9.9E-18 T 11-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_00064 cabb1d96963586d1c8a992ceb4d1eb94 1363 Pfam PF00562 RNA polymerase Rpb2, domain 6 719 1284 1.1E-165 T 11-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_00064 cabb1d96963586d1c8a992ceb4d1eb94 1363 Pfam PF04561 RNA polymerase Rpb2, domain 2 361 456 1.4E-15 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_00064 cabb1d96963586d1c8a992ceb4d1eb94 1363 Pfam PF04561 RNA polymerase Rpb2, domain 2 150 221 1.5E-7 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_00064 cabb1d96963586d1c8a992ceb4d1eb94 1363 Pfam PF04565 RNA polymerase Rpb2, domain 3 515 583 5.1E-31 T 11-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_00064 cabb1d96963586d1c8a992ceb4d1eb94 1363 Gene3D G3DSA:2.40.270.10 1059 1262 7.3E-81 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_00872 1e629ab636ddc40ea0eff78f43edb0fa 894 Gene3D G3DSA:3.40.1110.10 339 540 1.7E-298 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 SYN_00872 1e629ab636ddc40ea0eff78f43edb0fa 894 Pfam PF00702 haloacid dehalogenase-like hydrolase 326 648 2.5E-21 T 11-10-2018 SYN_00872 1e629ab636ddc40ea0eff78f43edb0fa 894 SUPERFAMILY SSF81665 8 892 1.29E-126 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 SYN_00872 1e629ab636ddc40ea0eff78f43edb0fa 894 SUPERFAMILY SSF81653 121 228 8.11E-29 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 SYN_00872 1e629ab636ddc40ea0eff78f43edb0fa 894 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 666 691 9.1E-19 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SYN_00872 1e629ab636ddc40ea0eff78f43edb0fa 894 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 634 650 9.1E-19 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SYN_00872 1e629ab636ddc40ea0eff78f43edb0fa 894 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 491 509 9.1E-19 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SYN_00872 1e629ab636ddc40ea0eff78f43edb0fa 894 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 606 622 9.1E-19 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SYN_00872 1e629ab636ddc40ea0eff78f43edb0fa 894 Gene3D G3DSA:3.40.50.1000 326 679 1.7E-298 T 11-10-2018 IPR023214 HAD superfamily SYN_00872 1e629ab636ddc40ea0eff78f43edb0fa 894 SUPERFAMILY SSF56784 327 739 4.21E-66 T 11-10-2018 IPR036412 HAD-like superfamily SYN_00872 1e629ab636ddc40ea0eff78f43edb0fa 894 Pfam PF00689 Cation transporting ATPase, C-terminus 719 888 8.7E-43 T 11-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 SYN_00872 1e629ab636ddc40ea0eff78f43edb0fa 894 SMART SM00831 8 82 1.9E-32 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 SYN_00872 1e629ab636ddc40ea0eff78f43edb0fa 894 SUPERFAMILY SSF81660 336 537 8.72E-55 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 SYN_00872 1e629ab636ddc40ea0eff78f43edb0fa 894 Pfam PF00122 E1-E2 ATPase 120 309 1.4E-54 T 11-10-2018 SYN_00872 1e629ab636ddc40ea0eff78f43edb0fa 894 Gene3D G3DSA:2.70.150.10 24 232 1.7E-298 T 11-10-2018 SYN_00872 1e629ab636ddc40ea0eff78f43edb0fa 894 Pfam PF00690 Cation transporter/ATPase, N-terminus 9 76 8.3E-16 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 SYN_00872 1e629ab636ddc40ea0eff78f43edb0fa 894 Gene3D G3DSA:1.20.1110.10 60 888 1.7E-298 T 11-10-2018 SYN_00872 1e629ab636ddc40ea0eff78f43edb0fa 894 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 331 337 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 SYN_00872 1e629ab636ddc40ea0eff78f43edb0fa 894 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 329 343 1.7E-43 T 11-10-2018 SYN_00872 1e629ab636ddc40ea0eff78f43edb0fa 894 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 555 565 1.7E-43 T 11-10-2018 SYN_00872 1e629ab636ddc40ea0eff78f43edb0fa 894 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 533 544 1.7E-43 T 11-10-2018 SYN_00872 1e629ab636ddc40ea0eff78f43edb0fa 894 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 634 653 1.7E-43 T 11-10-2018 SYN_00872 1e629ab636ddc40ea0eff78f43edb0fa 894 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 658 670 1.7E-43 T 11-10-2018 SYN_00872 1e629ab636ddc40ea0eff78f43edb0fa 894 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 167 181 1.7E-43 T 11-10-2018 SYN_00872 1e629ab636ddc40ea0eff78f43edb0fa 894 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 603 725 5.1E-36 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SYN_00872 1e629ab636ddc40ea0eff78f43edb0fa 894 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 88 194 2.1E-20 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SYN_00872 1e629ab636ddc40ea0eff78f43edb0fa 894 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 221 349 4.7E-29 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SYN_02815 5ae4306ad14701e21ea0bb9af977d74a 111 Pfam PF10135 Rod binding protein 57 105 5.3E-13 T 11-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal SYN_02971 524d4feb0a0d83b091588ac326991c9a 340 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 340 166.868 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 SYN_02971 524d4feb0a0d83b091588ac326991c9a 340 Gene3D G3DSA:1.10.10.10 259 336 1.8E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_02971 524d4feb0a0d83b091588ac326991c9a 340 SMART SM00382 53 181 6.8E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_02971 524d4feb0a0d83b091588ac326991c9a 340 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 252 328 3.0E-27 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 SYN_02971 524d4feb0a0d83b091588ac326991c9a 340 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 6 237 2.1E-118 T 11-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 SYN_02971 524d4feb0a0d83b091588ac326991c9a 340 Gene3D G3DSA:1.10.8.60 184 257 1.9E-32 T 11-10-2018 SYN_02971 524d4feb0a0d83b091588ac326991c9a 340 SUPERFAMILY SSF46785 259 328 2.18E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_02971 524d4feb0a0d83b091588ac326991c9a 340 SUPERFAMILY SSF52540 22 253 4.01E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02971 524d4feb0a0d83b091588ac326991c9a 340 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 255 328 2.0E-33 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 SYN_02971 524d4feb0a0d83b091588ac326991c9a 340 Gene3D G3DSA:3.40.50.300 20 183 1.3E-40 T 11-10-2018 SYN_02971 524d4feb0a0d83b091588ac326991c9a 340 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 26 328 1.9E-147 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 SYN_01702 3f573d96941b770c44dadbd10ecb0ae7 502 Pfam PF00158 Sigma-54 interaction domain 139 306 1.5E-70 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SYN_01702 3f573d96941b770c44dadbd10ecb0ae7 502 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 163 176 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SYN_01702 3f573d96941b770c44dadbd10ecb0ae7 502 SMART SM00448 2 113 1.5E-40 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_01702 3f573d96941b770c44dadbd10ecb0ae7 502 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 480 500 8.1E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_01702 3f573d96941b770c44dadbd10ecb0ae7 502 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 463 480 8.1E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_01702 3f573d96941b770c44dadbd10ecb0ae7 502 Pfam PF00072 Response regulator receiver domain 4 113 6.8E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_01702 3f573d96941b770c44dadbd10ecb0ae7 502 SUPERFAMILY SSF52540 138 383 1.46E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01702 3f573d96941b770c44dadbd10ecb0ae7 502 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site SYN_01702 3f573d96941b770c44dadbd10ecb0ae7 502 Gene3D G3DSA:1.10.10.60 415 499 2.3E-15 T 11-10-2018 SYN_01702 3f573d96941b770c44dadbd10ecb0ae7 502 Gene3D G3DSA:3.40.50.300 131 310 3.1E-68 T 11-10-2018 SYN_01702 3f573d96941b770c44dadbd10ecb0ae7 502 SUPERFAMILY SSF46689 352 499 7.62E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SYN_01702 3f573d96941b770c44dadbd10ecb0ae7 502 Gene3D G3DSA:3.40.50.2300 1 130 1.8E-41 T 11-10-2018 SYN_01702 3f573d96941b770c44dadbd10ecb0ae7 502 Pfam PF02954 Bacterial regulatory protein, Fis family 458 497 2.4E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_01702 3f573d96941b770c44dadbd10ecb0ae7 502 SMART SM00382 159 306 5.0E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01702 3f573d96941b770c44dadbd10ecb0ae7 502 Gene3D G3DSA:1.10.8.60 311 391 7.2E-28 T 11-10-2018 SYN_01702 3f573d96941b770c44dadbd10ecb0ae7 502 SUPERFAMILY SSF52172 2 183 1.14E-47 T 11-10-2018 IPR011006 CheY-like superfamily SYN_01182 4883d2a0f0a8b1410dce13c856cf9074 229 Pfam PF01592 NifU-like N terminal domain 4 124 7.0E-48 T 11-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 SYN_01182 4883d2a0f0a8b1410dce13c856cf9074 229 SUPERFAMILY SSF82649 2 124 2.22E-41 T 11-10-2018 SYN_01182 4883d2a0f0a8b1410dce13c856cf9074 229 Gene3D G3DSA:3.90.1010.10 1 134 9.8E-53 T 11-10-2018 SYN_01182 4883d2a0f0a8b1410dce13c856cf9074 229 Gene3D G3DSA:1.10.10.1100 135 187 3.1E-12 T 11-10-2018 SYN_01182 4883d2a0f0a8b1410dce13c856cf9074 229 PIRSF PIRSF000375 1 216 1.9E-84 T 11-10-2018 IPR016217 Nitrogen fixation, NifU SYN_01182 4883d2a0f0a8b1410dce13c856cf9074 229 Pfam PF04324 BFD-like [2Fe-2S] binding domain 132 181 7.5E-20 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain SYN_02685 b681236c1b582d414e45af5821f0039d 407 Pfam PF13579 Glycosyl transferase 4-like domain 19 199 2.0E-16 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 SYN_02685 b681236c1b582d414e45af5821f0039d 407 Gene3D G3DSA:3.40.50.2000 1 209 1.4E-16 T 11-10-2018 SYN_02685 b681236c1b582d414e45af5821f0039d 407 Pfam PF00534 Glycosyl transferases group 1 222 381 2.2E-18 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 SYN_02685 b681236c1b582d414e45af5821f0039d 407 Gene3D G3DSA:3.40.50.2000 210 387 3.2E-34 T 11-10-2018 SYN_02685 b681236c1b582d414e45af5821f0039d 407 SUPERFAMILY SSF53756 18 398 1.38E-58 T 11-10-2018 SYN_01517 36b0a9b7f7f461555d4a0b08515597b7 361 Pfam PF00155 Aminotransferase class I and II 29 357 6.9E-47 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SYN_01517 36b0a9b7f7f461555d4a0b08515597b7 361 Gene3D G3DSA:3.90.1150.10 24 350 6.6E-101 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SYN_01517 36b0a9b7f7f461555d4a0b08515597b7 361 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 12 359 7.3E-89 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 SYN_01517 36b0a9b7f7f461555d4a0b08515597b7 361 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 8 361 56.17 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 SYN_01517 36b0a9b7f7f461555d4a0b08515597b7 361 Gene3D G3DSA:3.40.640.10 42 269 6.6E-101 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SYN_01517 36b0a9b7f7f461555d4a0b08515597b7 361 SUPERFAMILY SSF53383 15 360 1.5E-74 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SYN_01517 36b0a9b7f7f461555d4a0b08515597b7 361 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 217 226 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 SYN_01560 1e787b526ca9d19ee5e99fc471ba4a8d 215 Gene3D G3DSA:3.20.20.70 3 208 1.5E-39 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_01560 1e787b526ca9d19ee5e99fc471ba4a8d 215 Pfam PF13394 4Fe-4S single cluster domain 24 104 3.4E-8 T 11-10-2018 SYN_01560 1e787b526ca9d19ee5e99fc471ba4a8d 215 SUPERFAMILY SSF102114 26 108 1.57E-15 T 11-10-2018 SYN_01560 1e787b526ca9d19ee5e99fc471ba4a8d 215 PIRSF PIRSF000370 1 214 9.6E-65 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 SYN_01560 1e787b526ca9d19ee5e99fc471ba4a8d 215 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 211 36.904 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 SYN_01560 1e787b526ca9d19ee5e99fc471ba4a8d 215 Pfam PF04055 Radical SAM superfamily 26 109 2.4E-11 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_02800 442e1b32eca643b9e1d244067b93e73a 268 SUPERFAMILY SSF53955 133 257 6.52E-41 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily SYN_02800 442e1b32eca643b9e1d244067b93e73a 268 Pfam PF01464 Transglycosylase SLT domain 140 234 2.8E-27 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 SYN_02800 442e1b32eca643b9e1d244067b93e73a 268 Gene3D G3DSA:1.10.530.10 107 258 3.4E-43 T 11-10-2018 SYN_01601 ff88a315d886ee290ec59e042f1576bc 345 SUPERFAMILY SSF55257 5 229 4.71E-31 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_01601 ff88a315d886ee290ec59e042f1576bc 345 SMART SM00662 25 232 5.3E-80 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_01601 ff88a315d886ee290ec59e042f1576bc 345 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 25 323 5.0E-113 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_01601 ff88a315d886ee290ec59e042f1576bc 345 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 64 157 3.0E-20 T 11-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_01601 ff88a315d886ee290ec59e042f1576bc 345 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 264 329 5.0E-23 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_01601 ff88a315d886ee290ec59e042f1576bc 345 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 324 36.448 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_01601 ff88a315d886ee290ec59e042f1576bc 345 Gene3D G3DSA:1.10.150.20 225 345 6.6E-35 T 11-10-2018 SYN_01601 ff88a315d886ee290ec59e042f1576bc 345 Gene3D G3DSA:2.170.120.12 55 175 4.3E-85 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_01601 ff88a315d886ee290ec59e042f1576bc 345 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 252 316 4.0E-26 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_01601 ff88a315d886ee290ec59e042f1576bc 345 SUPERFAMILY SSF47789 257 327 6.02E-26 T 11-10-2018 SYN_01601 ff88a315d886ee290ec59e042f1576bc 345 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 31 226 2.7E-23 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_01601 ff88a315d886ee290ec59e042f1576bc 345 SUPERFAMILY SSF56553 55 176 3.01E-40 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_01601 ff88a315d886ee290ec59e042f1576bc 345 Gene3D G3DSA:3.30.1360.10 21 224 4.3E-85 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_02651 db8f262d2bea232756f050ff2867dcdd 408 Gene3D G3DSA:2.20.25.520 1 54 1.2E-13 T 11-10-2018 IPR038576 Methyltransferase putative zinc binding domain superfamily SYN_02651 db8f262d2bea232756f050ff2867dcdd 408 Gene3D G3DSA:3.40.50.150 57 255 6.7E-44 T 11-10-2018 SYN_02651 db8f262d2bea232756f050ff2867dcdd 408 Pfam PF08484 C-methyltransferase C-terminal domain 245 402 1.0E-63 T 11-10-2018 IPR013691 C-methyltransferase SYN_02651 db8f262d2bea232756f050ff2867dcdd 408 SUPERFAMILY SSF53335 60 248 7.77E-22 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_02651 db8f262d2bea232756f050ff2867dcdd 408 Gene3D G3DSA:3.40.50.720 309 408 9.3E-40 T 11-10-2018 SYN_02651 db8f262d2bea232756f050ff2867dcdd 408 Pfam PF13489 Methyltransferase domain 91 237 1.5E-10 T 11-10-2018 SYN_02651 db8f262d2bea232756f050ff2867dcdd 408 Pfam PF08421 Putative zinc binding domain 3 64 2.6E-22 T 11-10-2018 IPR013630 Methyltransferase putative zinc binding domain SYN_00426 95277bc9cf69aee87a2e0fbf98ea376f 432 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 428 9.0E-22 T 11-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SYN_00426 95277bc9cf69aee87a2e0fbf98ea376f 432 Gene3D G3DSA:1.10.40.30 349 431 6.8E-29 T 11-10-2018 SYN_00426 95277bc9cf69aee87a2e0fbf98ea376f 432 Pfam PF00206 Lyase 6 281 6.0E-57 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal SYN_00426 95277bc9cf69aee87a2e0fbf98ea376f 432 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 2.6E-29 T 11-10-2018 IPR000362 Fumarate lyase family SYN_00426 95277bc9cf69aee87a2e0fbf98ea376f 432 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 2.6E-29 T 11-10-2018 IPR000362 Fumarate lyase family SYN_00426 95277bc9cf69aee87a2e0fbf98ea376f 432 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 2.6E-29 T 11-10-2018 IPR000362 Fumarate lyase family SYN_00426 95277bc9cf69aee87a2e0fbf98ea376f 432 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 2.6E-29 T 11-10-2018 IPR000362 Fumarate lyase family SYN_00426 95277bc9cf69aee87a2e0fbf98ea376f 432 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 SYN_00426 95277bc9cf69aee87a2e0fbf98ea376f 432 SMART SM00998 349 429 3.8E-34 T 11-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SYN_00426 95277bc9cf69aee87a2e0fbf98ea376f 432 PRINTS PR00145 Argininosuccinate lyase family signature 87 109 1.5E-11 T 11-10-2018 SYN_00426 95277bc9cf69aee87a2e0fbf98ea376f 432 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 1.5E-11 T 11-10-2018 SYN_00426 95277bc9cf69aee87a2e0fbf98ea376f 432 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 1.5E-11 T 11-10-2018 SYN_00426 95277bc9cf69aee87a2e0fbf98ea376f 432 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 1.5E-11 T 11-10-2018 SYN_00426 95277bc9cf69aee87a2e0fbf98ea376f 432 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 2 429 8.5E-159 T 11-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SYN_00426 95277bc9cf69aee87a2e0fbf98ea376f 432 SUPERFAMILY SSF48557 3 429 1.3E-135 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 SYN_00426 95277bc9cf69aee87a2e0fbf98ea376f 432 Gene3D G3DSA:1.10.275.10 1 92 3.7E-34 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal SYN_00426 95277bc9cf69aee87a2e0fbf98ea376f 432 Gene3D G3DSA:1.20.200.10 93 348 5.0E-92 T 11-10-2018 SYN_02808 b3b1bae533ffb286626ebc60c5576a9d 134 SUPERFAMILY SSF160214 37 134 1.15E-17 T 11-10-2018 IPR035924 FlaG-like superfamily SYN_02808 b3b1bae533ffb286626ebc60c5576a9d 134 Pfam PF03646 FlaG protein 51 132 1.7E-16 T 11-10-2018 IPR005186 FlaG protein SYN_02808 b3b1bae533ffb286626ebc60c5576a9d 134 Gene3D G3DSA:3.30.160.170 41 130 3.6E-9 T 11-10-2018 IPR035924 FlaG-like superfamily SYN_02152 2709545992e04d14f7ec69f3c0ab8475 212 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 21 192 40.34 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 SYN_02152 2709545992e04d14f7ec69f3c0ab8475 212 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 22 192 4.7E-84 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 SYN_02152 2709545992e04d14f7ec69f3c0ab8475 212 Gene3D G3DSA:3.60.20.10 17 193 5.2E-66 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal SYN_02152 2709545992e04d14f7ec69f3c0ab8475 212 Pfam PF00227 Proteasome subunit 20 190 2.6E-25 T 11-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 SYN_02152 2709545992e04d14f7ec69f3c0ab8475 212 PIRSF PIRSF039093 15 195 3.7E-93 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 SYN_02152 2709545992e04d14f7ec69f3c0ab8475 212 SUPERFAMILY SSF56235 19 192 5.5E-60 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal SYN_02837 a114cb451a8d9ccc9dd06158f4348c6d 333 Gene3D G3DSA:2.30.330.10 243 330 2.6E-13 T 11-10-2018 IPR036429 SpoA-like superfamily SYN_02837 a114cb451a8d9ccc9dd06158f4348c6d 333 PRINTS PR00955 Flagellar motor switch protein FliM signature 89 105 7.9E-25 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SYN_02837 a114cb451a8d9ccc9dd06158f4348c6d 333 PRINTS PR00955 Flagellar motor switch protein FliM signature 212 230 7.9E-25 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SYN_02837 a114cb451a8d9ccc9dd06158f4348c6d 333 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 7.9E-25 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SYN_02837 a114cb451a8d9ccc9dd06158f4348c6d 333 PRINTS PR00955 Flagellar motor switch protein FliM signature 114 133 7.9E-25 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SYN_02837 a114cb451a8d9ccc9dd06158f4348c6d 333 Gene3D G3DSA:3.40.1550.10 44 231 1.3E-59 T 11-10-2018 IPR028976 CheC-like superfamily SYN_02837 a114cb451a8d9ccc9dd06158f4348c6d 333 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 322 1.4E-101 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SYN_02837 a114cb451a8d9ccc9dd06158f4348c6d 333 SUPERFAMILY SSF101801 249 326 2.49E-17 T 11-10-2018 IPR036429 SpoA-like superfamily SYN_02837 a114cb451a8d9ccc9dd06158f4348c6d 333 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 252 322 1.4E-18 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) SYN_02837 a114cb451a8d9ccc9dd06158f4348c6d 333 Pfam PF02154 Flagellar motor switch protein FliM 38 230 2.1E-68 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SYN_02837 a114cb451a8d9ccc9dd06158f4348c6d 333 PIRSF PIRSF002888 1 332 4.9E-118 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 SYN_02837 a114cb451a8d9ccc9dd06158f4348c6d 333 SUPERFAMILY SSF103039 53 231 2.27E-24 T 11-10-2018 IPR028976 CheC-like superfamily SYN_02278 ea39a906d4fa4a7bfc6059ab27f53e36 274 Gene3D G3DSA:3.40.1280.10 86 269 1.6E-60 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SYN_02278 ea39a906d4fa4a7bfc6059ab27f53e36 274 PIRSF PIRSF015601 15 257 1.4E-61 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 SYN_02278 ea39a906d4fa4a7bfc6059ab27f53e36 274 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 31 256 3.5E-56 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 SYN_02278 ea39a906d4fa4a7bfc6059ab27f53e36 274 Pfam PF04452 RNA methyltransferase 32 254 3.5E-67 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 SYN_02278 ea39a906d4fa4a7bfc6059ab27f53e36 274 SUPERFAMILY SSF88697 16 82 1.22E-14 T 11-10-2018 IPR015947 PUA-like superfamily SYN_02278 ea39a906d4fa4a7bfc6059ab27f53e36 274 Gene3D G3DSA:2.40.240.20 12 85 1.5E-18 T 11-10-2018 SYN_02278 ea39a906d4fa4a7bfc6059ab27f53e36 274 SUPERFAMILY SSF75217 86 258 9.42E-50 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases SYN_00110 33eb6cbd4b8a330ab308443027fca7b8 270 Gene3D G3DSA:1.10.287.110 3 125 1.4E-30 T 11-10-2018 IPR036869 Chaperone J-domain superfamily SYN_00110 33eb6cbd4b8a330ab308443027fca7b8 270 Pfam PF00226 DnaJ domain 5 67 1.6E-25 T 11-10-2018 IPR001623 DnaJ domain SYN_00110 33eb6cbd4b8a330ab308443027fca7b8 270 Pfam PF01556 DnaJ C terminal domain 173 262 4.7E-8 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal SYN_00110 33eb6cbd4b8a330ab308443027fca7b8 270 Gene3D G3DSA:2.60.260.20 177 246 2.9E-14 T 11-10-2018 SYN_00110 33eb6cbd4b8a330ab308443027fca7b8 270 SUPERFAMILY SSF49493 178 248 4.45E-10 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SYN_00110 33eb6cbd4b8a330ab308443027fca7b8 270 PRINTS PR00625 DnaJ domain signature 25 40 8.5E-20 T 11-10-2018 IPR001623 DnaJ domain SYN_00110 33eb6cbd4b8a330ab308443027fca7b8 270 PRINTS PR00625 DnaJ domain signature 62 81 8.5E-20 T 11-10-2018 IPR001623 DnaJ domain SYN_00110 33eb6cbd4b8a330ab308443027fca7b8 270 PRINTS PR00625 DnaJ domain signature 7 25 8.5E-20 T 11-10-2018 IPR001623 DnaJ domain SYN_00110 33eb6cbd4b8a330ab308443027fca7b8 270 PRINTS PR00625 DnaJ domain signature 42 62 8.5E-20 T 11-10-2018 IPR001623 DnaJ domain SYN_00110 33eb6cbd4b8a330ab308443027fca7b8 270 SMART SM00271 4 62 1.8E-28 T 11-10-2018 IPR001623 DnaJ domain SYN_00110 33eb6cbd4b8a330ab308443027fca7b8 270 SUPERFAMILY SSF46565 2 73 1.31E-26 T 11-10-2018 IPR036869 Chaperone J-domain superfamily SYN_01378 003a49509a570b28d09f997cfe6578a3 254 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 22 253 2.4E-66 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 SYN_01378 003a49509a570b28d09f997cfe6578a3 254 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 22 252 1.2E-75 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 SYN_01378 003a49509a570b28d09f997cfe6578a3 254 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 254 72.768 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 SYN_01378 003a49509a570b28d09f997cfe6578a3 254 SUPERFAMILY SSF63892 21 253 3.14E-72 T 11-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 SYN_01378 003a49509a570b28d09f997cfe6578a3 254 Gene3D G3DSA:3.20.20.70 14 254 4.7E-80 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_01745 e0cc5abef2f6a424fc06b0db67e5ae30 390 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 27 382 3.3E-121 T 11-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SYN_01745 e0cc5abef2f6a424fc06b0db67e5ae30 390 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 342 366 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SYN_01745 e0cc5abef2f6a424fc06b0db67e5ae30 390 Pfam PF01098 Cell cycle protein 29 384 5.2E-112 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SYN_00626 63c7f7132ed93aa4aef4b4568c07b155 1039 Gene3D G3DSA:3.30.70.20 116 192 3.6E-6 T 11-10-2018 SYN_00626 63c7f7132ed93aa4aef4b4568c07b155 1039 Gene3D G3DSA:3.50.50.60 373 436 5.9E-7 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_00626 63c7f7132ed93aa4aef4b4568c07b155 1039 Pfam PF00037 4Fe-4S binding domain 115 133 3.1E-5 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_00626 63c7f7132ed93aa4aef4b4568c07b155 1039 Gene3D G3DSA:3.40.50.720 15 115 3.0E-10 T 11-10-2018 SYN_00626 63c7f7132ed93aa4aef4b4568c07b155 1039 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 427 442 6.8E-5 T 11-10-2018 SYN_00626 63c7f7132ed93aa4aef4b4568c07b155 1039 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 20 42 6.8E-5 T 11-10-2018 SYN_00626 63c7f7132ed93aa4aef4b4568c07b155 1039 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 121 132 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_00626 63c7f7132ed93aa4aef4b4568c07b155 1039 Gene3D G3DSA:3.50.50.60 302 372 5.9E-7 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_00626 63c7f7132ed93aa4aef4b4568c07b155 1039 SUPERFAMILY SSF51971 604 938 1.53E-21 T 11-10-2018 SYN_00626 63c7f7132ed93aa4aef4b4568c07b155 1039 SUPERFAMILY SSF54862 939 1013 1.58E-17 T 11-10-2018 SYN_00626 63c7f7132ed93aa4aef4b4568c07b155 1039 SUPERFAMILY SSF51905 20 441 4.23E-23 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_00626 63c7f7132ed93aa4aef4b4568c07b155 1039 Pfam PF12838 4Fe-4S dicluster domain 957 1004 6.5E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_00626 63c7f7132ed93aa4aef4b4568c07b155 1039 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 606 927 8.3E-8 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SYN_00626 63c7f7132ed93aa4aef4b4568c07b155 1039 Gene3D G3DSA:3.30.70.20 924 1022 6.9E-13 T 11-10-2018 SYN_00626 63c7f7132ed93aa4aef4b4568c07b155 1039 Gene3D G3DSA:3.50.50.60 605 818 1.1E-22 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_00626 63c7f7132ed93aa4aef4b4568c07b155 1039 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 20 434 2.7E-19 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SYN_00626 63c7f7132ed93aa4aef4b4568c07b155 1039 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 990 1001 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_02347 25dad272b6a9987d77165f6433e519b5 242 Gene3D G3DSA:3.10.120.10 9 84 1.1E-5 T 11-10-2018 IPR036400 Cytochrome b5-like heme/steroid binding domain superfamily SYN_02347 25dad272b6a9987d77165f6433e519b5 242 SUPERFAMILY SSF55856 9 76 2.62E-11 T 11-10-2018 IPR036400 Cytochrome b5-like heme/steroid binding domain superfamily SYN_02347 25dad272b6a9987d77165f6433e519b5 242 SMART SM01117 12 85 1.7E-10 T 11-10-2018 IPR001199 Cytochrome b5-like heme/steroid binding domain SYN_02607 079924211daa31a7f6fd1a762077f194 899 SUPERFAMILY SSF51735 4 131 5.17E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_02607 079924211daa31a7f6fd1a762077f194 899 Pfam PF13549 ATP-grasp domain 483 704 7.8E-73 T 11-10-2018 SYN_02607 079924211daa31a7f6fd1a762077f194 899 Gene3D G3DSA:3.30.470.20 492 702 7.7E-71 T 11-10-2018 SYN_02607 079924211daa31a7f6fd1a762077f194 899 SMART SM00881 7 101 1.8E-32 T 11-10-2018 IPR003781 CoA-binding GO:0048037 SYN_02607 079924211daa31a7f6fd1a762077f194 899 Gene3D G3DSA:3.40.630.30 736 899 2.0E-40 T 11-10-2018 SYN_02607 079924211daa31a7f6fd1a762077f194 899 Pfam PF13302 Acetyltransferase (GNAT) domain 746 882 1.8E-9 T 11-10-2018 IPR000182 GNAT domain SYN_02607 079924211daa31a7f6fd1a762077f194 899 SUPERFAMILY SSF56059 492 705 1.01E-35 T 11-10-2018 SYN_02607 079924211daa31a7f6fd1a762077f194 899 Gene3D G3DSA:3.30.1490.20 510 587 7.7E-71 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 SYN_02607 079924211daa31a7f6fd1a762077f194 899 Gene3D G3DSA:3.40.50.261 131 290 7.2E-48 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_02607 079924211daa31a7f6fd1a762077f194 899 Gene3D G3DSA:3.40.50.261 293 463 3.4E-49 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_02607 079924211daa31a7f6fd1a762077f194 899 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 152 287 4.1E-45 T 11-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain SYN_02607 079924211daa31a7f6fd1a762077f194 899 SUPERFAMILY SSF52210 294 456 1.3E-36 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_02607 079924211daa31a7f6fd1a762077f194 899 SUPERFAMILY SSF55729 742 884 9.17E-22 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase SYN_02607 079924211daa31a7f6fd1a762077f194 899 Gene3D G3DSA:3.40.50.720 3 130 4.4E-39 T 11-10-2018 SYN_02607 079924211daa31a7f6fd1a762077f194 899 SUPERFAMILY SSF52210 130 291 1.27E-38 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_02607 079924211daa31a7f6fd1a762077f194 899 Pfam PF13380 CoA binding domain 11 135 6.9E-21 T 11-10-2018 IPR003781 CoA-binding GO:0048037 SYN_03003 e0399083b4ca3ddf8db4d94235057599 104 Pfam PF04972 BON domain 37 103 7.6E-21 T 11-10-2018 IPR007055 BON domain SYN_03003 e0399083b4ca3ddf8db4d94235057599 104 SMART SM00749 42 104 3.4E-8 T 11-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria SYN_02196 8a7fb15f6ee6b0d259562267db06cd9b 630 Pfam PF00575 S1 RNA binding domain 37 116 1.3E-7 T 11-10-2018 IPR003029 S1 domain GO:0003676 SYN_02196 8a7fb15f6ee6b0d259562267db06cd9b 630 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 16 415 1.7E-145 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 SYN_02196 8a7fb15f6ee6b0d259562267db06cd9b 630 Gene3D G3DSA:2.40.50.140 32 127 1.8E-26 T 11-10-2018 SYN_02196 8a7fb15f6ee6b0d259562267db06cd9b 630 SMART SM00316 38 121 1.7E-9 T 11-10-2018 IPR022967 RNA-binding domain, S1 SYN_02196 8a7fb15f6ee6b0d259562267db06cd9b 630 Pfam PF10150 Ribonuclease E/G family 123 392 8.5E-98 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 SYN_02196 8a7fb15f6ee6b0d259562267db06cd9b 630 SUPERFAMILY SSF50249 40 127 2.68E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_02196 8a7fb15f6ee6b0d259562267db06cd9b 630 Gene3D G3DSA:3.40.1260.20 402 507 4.0E-22 T 11-10-2018 SYN_01220 6c41bed669ab6c08637e01ee64486230 537 SUPERFAMILY SSF103473 18 410 6.8E-50 T 11-10-2018 IPR036259 MFS transporter superfamily SYN_01220 6c41bed669ab6c08637e01ee64486230 537 Gene3D G3DSA:1.20.1250.20 15 205 1.4E-16 T 11-10-2018 SYN_01220 6c41bed669ab6c08637e01ee64486230 537 Gene3D G3DSA:1.20.1250.20 231 477 4.4E-16 T 11-10-2018 SYN_01220 6c41bed669ab6c08637e01ee64486230 537 Pfam PF05977 Transmembrane secretion effector 17 410 4.8E-67 T 11-10-2018 IPR010290 Transmembrane secretion effector SYN_02849 816c0647967c6ee6f60a30575391b338 340 SMART SM00028 291 324 0.3 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_02849 816c0647967c6ee6f60a30575391b338 340 SMART SM00028 257 290 4.5E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_02849 816c0647967c6ee6f60a30575391b338 340 SMART SM00028 223 256 6.4E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_02849 816c0647967c6ee6f60a30575391b338 340 Pfam PF05036 Sporulation related domain 45 109 3.0E-9 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 SYN_02849 816c0647967c6ee6f60a30575391b338 340 Gene3D G3DSA:1.25.40.10 189 334 2.4E-25 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_02849 816c0647967c6ee6f60a30575391b338 340 SUPERFAMILY SSF48452 213 324 5.92E-24 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_02849 816c0647967c6ee6f60a30575391b338 340 SUPERFAMILY SSF110997 43 113 1.44E-11 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 SYN_02849 816c0647967c6ee6f60a30575391b338 340 Pfam PF13414 TPR repeat 264 305 1.6E-9 T 11-10-2018 SYN_02849 816c0647967c6ee6f60a30575391b338 340 Gene3D G3DSA:3.30.70.1070 49 120 2.7E-8 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 SYN_02626 9a20aee2b1df7c4715baa0465e1982b9 411 Gene3D G3DSA:3.40.50.2000 5 386 3.9E-135 T 11-10-2018 SYN_02626 9a20aee2b1df7c4715baa0465e1982b9 411 Pfam PF00534 Glycosyl transferases group 1 212 377 8.2E-27 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 SYN_02626 9a20aee2b1df7c4715baa0465e1982b9 411 SUPERFAMILY SSF53756 31 399 7.85E-48 T 11-10-2018 SYN_02626 9a20aee2b1df7c4715baa0465e1982b9 411 Gene3D G3DSA:3.40.50.2000 191 385 3.9E-135 T 11-10-2018 SYN_00643 48909c85a359c96ab54f256d587d9aa9 88 Pfam PF01084 Ribosomal protein S18 31 80 2.0E-26 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00643 48909c85a359c96ab54f256d587d9aa9 88 PRINTS PR00974 Ribosomal protein S18 family signature 40 50 1.2E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00643 48909c85a359c96ab54f256d587d9aa9 88 PRINTS PR00974 Ribosomal protein S18 family signature 58 72 1.2E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00643 48909c85a359c96ab54f256d587d9aa9 88 PRINTS PR00974 Ribosomal protein S18 family signature 72 82 1.2E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00643 48909c85a359c96ab54f256d587d9aa9 88 PRINTS PR00974 Ribosomal protein S18 family signature 50 57 1.2E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00643 48909c85a359c96ab54f256d587d9aa9 88 TIGRFAM TIGR00165 S18: ribosomal protein bS18 16 84 2.9E-32 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00643 48909c85a359c96ab54f256d587d9aa9 88 SUPERFAMILY SSF46911 12 85 2.35E-29 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00643 48909c85a359c96ab54f256d587d9aa9 88 Gene3D G3DSA:4.10.640.10 3 86 3.5E-28 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00643 48909c85a359c96ab54f256d587d9aa9 88 ProSitePatterns PS00057 Ribosomal protein S18 signature. 33 56 - T 11-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00643 48909c85a359c96ab54f256d587d9aa9 88 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 33 83 5.0E-16 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00643 48909c85a359c96ab54f256d587d9aa9 88 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 14 85 21.249 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_02305 e0e9c86650e423737d34fcee9e2583f2 181 Pfam PF11985 Protein of unknown function (DUF3486) 5 177 5.2E-52 T 11-10-2018 IPR021874 Bacteriophage Mu, Gp27 SYN_00915 4600385a2791139a60f0d0198e5508c0 366 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 129 179 3.2E-7 T 11-10-2018 IPR001478 PDZ domain GO:0005515 SYN_00915 4600385a2791139a60f0d0198e5508c0 366 Gene3D G3DSA:2.30.42.10 124 218 8.4E-17 T 11-10-2018 SYN_00915 4600385a2791139a60f0d0198e5508c0 366 SMART SM00228 110 183 3.5E-5 T 11-10-2018 IPR001478 PDZ domain GO:0005515 SYN_00915 4600385a2791139a60f0d0198e5508c0 366 SUPERFAMILY SSF50156 86 192 9.46E-18 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 SYN_00915 4600385a2791139a60f0d0198e5508c0 366 Pfam PF02163 Peptidase family M50 9 340 4.0E-84 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 SYN_00915 4600385a2791139a60f0d0198e5508c0 366 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 5 174 3.3E-51 T 11-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 SYN_00915 4600385a2791139a60f0d0198e5508c0 366 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 131 352 2.7E-48 T 11-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 SYN_02930 25c8a72f4c17003c79744a83185e8999 691 SUPERFAMILY SSF50447 261 395 8.84E-31 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily SYN_02930 25c8a72f4c17003c79744a83185e8999 691 Gene3D G3DSA:3.40.50.300 2 283 7.0E-89 T 11-10-2018 SYN_02930 25c8a72f4c17003c79744a83185e8999 691 SMART SM00889 475 593 1.7E-71 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SYN_02930 25c8a72f4c17003c79744a83185e8999 691 Gene3D G3DSA:3.30.230.10 479 682 1.2E-90 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SYN_02930 25c8a72f4c17003c79744a83185e8999 691 TIGRFAM TIGR00484 EF-G: translation elongation factor G 6 687 5.5E-234 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SYN_02930 25c8a72f4c17003c79744a83185e8999 691 PRINTS PR00315 GTP-binding elongation factor signature 77 87 1.5E-6 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_02930 25c8a72f4c17003c79744a83185e8999 691 PRINTS PR00315 GTP-binding elongation factor signature 93 104 1.5E-6 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_02930 25c8a72f4c17003c79744a83185e8999 691 PRINTS PR00315 GTP-binding elongation factor signature 129 138 1.5E-6 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_02930 25c8a72f4c17003c79744a83185e8999 691 PRINTS PR00315 GTP-binding elongation factor signature 11 24 1.5E-6 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_02930 25c8a72f4c17003c79744a83185e8999 691 Gene3D G3DSA:3.30.70.870 407 478 1.0E-21 T 11-10-2018 SYN_02930 25c8a72f4c17003c79744a83185e8999 691 Gene3D G3DSA:2.40.30.10 286 406 1.2E-37 T 11-10-2018 SYN_02930 25c8a72f4c17003c79744a83185e8999 691 Pfam PF00009 Elongation factor Tu GTP binding domain 9 277 5.5E-48 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_02930 25c8a72f4c17003c79744a83185e8999 691 SMART SM00838 595 682 3.3E-43 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like SYN_02930 25c8a72f4c17003c79744a83185e8999 691 SUPERFAMILY SSF54980 595 686 9.11E-28 T 11-10-2018 IPR035647 EF-G domain III/V-like SYN_02930 25c8a72f4c17003c79744a83185e8999 691 Pfam PF00679 Elongation factor G C-terminus 595 681 5.5E-30 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like SYN_02930 25c8a72f4c17003c79744a83185e8999 691 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 177 4.1E-21 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 SYN_02930 25c8a72f4c17003c79744a83185e8999 691 SUPERFAMILY SSF54980 400 477 1.8E-19 T 11-10-2018 IPR035647 EF-G domain III/V-like SYN_02930 25c8a72f4c17003c79744a83185e8999 691 Pfam PF03764 Elongation factor G, domain IV 474 592 6.5E-46 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SYN_02930 25c8a72f4c17003c79744a83185e8999 691 SUPERFAMILY SSF54211 474 594 5.06E-45 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SYN_02930 25c8a72f4c17003c79744a83185e8999 691 SUPERFAMILY SSF52540 6 277 8.55E-85 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02930 25c8a72f4c17003c79744a83185e8999 691 Gene3D G3DSA:3.30.70.240 599 669 1.2E-90 T 11-10-2018 SYN_02930 25c8a72f4c17003c79744a83185e8999 691 Pfam PF14492 Elongation Factor G, domain II 400 472 2.1E-27 T 11-10-2018 SYN_00185 fddbdd3fa00e763836744459bc90d31c 248 Pfam PF01618 MotA/TolQ/ExbB proton channel family 120 231 4.0E-38 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel SYN_00185 fddbdd3fa00e763836744459bc90d31c 248 TIGRFAM TIGR02796 tolQ: protein TolQ 19 243 2.8E-67 T 11-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 SYN_02208 9758aec2319285e7a0f9bd755c37ae21 749 Pfam PF07664 Ferrous iron transport protein B C terminus 545 595 1.1E-11 T 11-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 SYN_02208 9758aec2319285e7a0f9bd755c37ae21 749 Gene3D G3DSA:3.40.50.300 94 261 2.0E-40 T 11-10-2018 SYN_02208 9758aec2319285e7a0f9bd755c37ae21 749 SMART SM00899 6 76 6.1E-13 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SYN_02208 9758aec2319285e7a0f9bd755c37ae21 749 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 99 715 6.0E-170 T 11-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SYN_02208 9758aec2319285e7a0f9bd755c37ae21 749 Pfam PF07670 Nucleoside recognition 439 531 1.2E-10 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 SYN_02208 9758aec2319285e7a0f9bd755c37ae21 749 Pfam PF07670 Nucleoside recognition 600 717 9.0E-26 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 SYN_02208 9758aec2319285e7a0f9bd755c37ae21 749 SUPERFAMILY SSF52540 95 262 2.38E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02208 9758aec2319285e7a0f9bd755c37ae21 749 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 95 115 1.3E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 SYN_02208 9758aec2319285e7a0f9bd755c37ae21 749 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 116 134 1.3E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 SYN_02208 9758aec2319285e7a0f9bd755c37ae21 749 SUPERFAMILY SSF50037 8 74 1.43E-8 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal SYN_02208 9758aec2319285e7a0f9bd755c37ae21 749 Pfam PF02421 Ferrous iron transport protein B 94 247 1.6E-59 T 11-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 SYN_02208 9758aec2319285e7a0f9bd755c37ae21 749 Gene3D G3DSA:2.30.30.90 6 82 8.9E-12 T 11-10-2018 IPR038157 Ferrous iron transporter, core domain SYN_02208 9758aec2319285e7a0f9bd755c37ae21 749 Pfam PF04023 FeoA domain 7 74 2.3E-11 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SYN_01561 2ffaf8731c0d16ad91c82ddabf2b5a99 231 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 5 227 55.252 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 SYN_01561 2ffaf8731c0d16ad91c82ddabf2b5a99 231 Gene3D G3DSA:3.40.50.620 3 227 4.6E-76 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_01561 2ffaf8731c0d16ad91c82ddabf2b5a99 231 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 7 214 5.0E-63 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 SYN_01561 2ffaf8731c0d16ad91c82ddabf2b5a99 231 PIRSF PIRSF006293 3 231 1.9E-77 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 SYN_01561 2ffaf8731c0d16ad91c82ddabf2b5a99 231 Pfam PF06508 Queuosine biosynthesis protein QueC 6 221 9.3E-76 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 SYN_01561 2ffaf8731c0d16ad91c82ddabf2b5a99 231 SUPERFAMILY SSF52402 4 227 4.41E-63 T 11-10-2018 SYN_00226 db0dc522ad1c6c9d5641db2b04fbd5cf 683 Gene3D G3DSA:3.30.565.10 216 394 1.1E-54 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_00226 db0dc522ad1c6c9d5641db2b04fbd5cf 683 Gene3D G3DSA:3.40.50.12740 558 683 2.5E-41 T 11-10-2018 SYN_00226 db0dc522ad1c6c9d5641db2b04fbd5cf 683 Gene3D G3DSA:3.40.50.12740 411 557 5.7E-31 T 11-10-2018 SYN_00226 db0dc522ad1c6c9d5641db2b04fbd5cf 683 SMART SM00448 411 529 2.8E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00226 db0dc522ad1c6c9d5641db2b04fbd5cf 683 SMART SM00448 557 673 2.1E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00226 db0dc522ad1c6c9d5641db2b04fbd5cf 683 SUPERFAMILY SSF47384 138 218 1.22E-23 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SYN_00226 db0dc522ad1c6c9d5641db2b04fbd5cf 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 315 329 1.2E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_00226 db0dc522ad1c6c9d5641db2b04fbd5cf 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 368 1.2E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_00226 db0dc522ad1c6c9d5641db2b04fbd5cf 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 387 1.2E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_00226 db0dc522ad1c6c9d5641db2b04fbd5cf 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 343 1.2E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_00226 db0dc522ad1c6c9d5641db2b04fbd5cf 683 Pfam PF00512 His Kinase A (phospho-acceptor) domain 152 217 9.8E-20 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_00226 db0dc522ad1c6c9d5641db2b04fbd5cf 683 SMART SM00388 152 217 2.3E-25 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_00226 db0dc522ad1c6c9d5641db2b04fbd5cf 683 SMART SM00387 264 392 1.4E-41 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_00226 db0dc522ad1c6c9d5641db2b04fbd5cf 683 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 264 387 1.1E-34 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_00226 db0dc522ad1c6c9d5641db2b04fbd5cf 683 SUPERFAMILY SSF52172 408 532 1.85E-27 T 11-10-2018 IPR011006 CheY-like superfamily SYN_00226 db0dc522ad1c6c9d5641db2b04fbd5cf 683 Gene3D G3DSA:1.10.287.130 122 215 1.7E-31 T 11-10-2018 SYN_00226 db0dc522ad1c6c9d5641db2b04fbd5cf 683 SUPERFAMILY SSF55874 206 385 3.93E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_00226 db0dc522ad1c6c9d5641db2b04fbd5cf 683 Pfam PF00072 Response regulator receiver domain 559 673 2.0E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00226 db0dc522ad1c6c9d5641db2b04fbd5cf 683 Pfam PF00072 Response regulator receiver domain 414 529 1.5E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00226 db0dc522ad1c6c9d5641db2b04fbd5cf 683 SUPERFAMILY SSF52172 555 677 1.17E-36 T 11-10-2018 IPR011006 CheY-like superfamily SYN_01646 e0531f52ca37ad8328dde5f0a5dabf03 214 Pfam PF01022 Bacterial regulatory protein, arsR family 162 203 5.1E-9 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SYN_01646 e0531f52ca37ad8328dde5f0a5dabf03 214 Gene3D G3DSA:1.10.10.10 149 214 1.7E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_01646 e0531f52ca37ad8328dde5f0a5dabf03 214 Pfam PF02662 Methyl-viologen-reducing hydrogenase, delta subunit 1 91 7.2E-29 T 11-10-2018 IPR003813 F420-non-reducing hydrogenase iron-sulfur subunit D GO:0055114 SYN_01646 e0531f52ca37ad8328dde5f0a5dabf03 214 SUPERFAMILY SSF46785 163 209 3.04E-9 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_01191 6bd66d904f4ab6cdf33a751f56f30f74 455 Pfam PF02954 Bacterial regulatory protein, Fis family 404 442 2.3E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_01191 6bd66d904f4ab6cdf33a751f56f30f74 455 SUPERFAMILY SSF46689 355 445 2.37E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SYN_01191 6bd66d904f4ab6cdf33a751f56f30f74 455 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SYN_01191 6bd66d904f4ab6cdf33a751f56f30f74 455 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site SYN_01191 6bd66d904f4ab6cdf33a751f56f30f74 455 Gene3D G3DSA:1.10.8.60 312 389 5.0E-25 T 11-10-2018 SYN_01191 6bd66d904f4ab6cdf33a751f56f30f74 455 Gene3D G3DSA:3.30.450.20 1 122 1.2E-23 T 11-10-2018 SYN_01191 6bd66d904f4ab6cdf33a751f56f30f74 455 SUPERFAMILY SSF52540 140 384 4.58E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01191 6bd66d904f4ab6cdf33a751f56f30f74 455 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SYN_01191 6bd66d904f4ab6cdf33a751f56f30f74 455 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 426 446 9.2E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_01191 6bd66d904f4ab6cdf33a751f56f30f74 455 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 409 426 9.2E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_01191 6bd66d904f4ab6cdf33a751f56f30f74 455 Pfam PF00158 Sigma-54 interaction domain 141 307 9.5E-67 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SYN_01191 6bd66d904f4ab6cdf33a751f56f30f74 455 SMART SM00091 11 77 5.8E-7 T 11-10-2018 IPR000014 PAS domain SYN_01191 6bd66d904f4ab6cdf33a751f56f30f74 455 Gene3D G3DSA:3.40.50.300 126 311 6.7E-63 T 11-10-2018 SYN_01191 6bd66d904f4ab6cdf33a751f56f30f74 455 Pfam PF13426 PAS domain 22 123 5.9E-15 T 11-10-2018 IPR000014 PAS domain SYN_01191 6bd66d904f4ab6cdf33a751f56f30f74 455 Gene3D G3DSA:1.10.10.60 399 447 1.9E-13 T 11-10-2018 SYN_01191 6bd66d904f4ab6cdf33a751f56f30f74 455 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 14 131 3.2E-14 T 11-10-2018 IPR000014 PAS domain SYN_01191 6bd66d904f4ab6cdf33a751f56f30f74 455 SMART SM00382 161 303 7.8E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01191 6bd66d904f4ab6cdf33a751f56f30f74 455 SUPERFAMILY SSF55785 13 120 2.79E-20 T 11-10-2018 IPR035965 PAS domain superfamily SYN_02682 add127530fa3fadc1f64d29ebbc790ba 703 Gene3D G3DSA:3.40.50.720 155 309 1.2E-40 T 11-10-2018 SYN_02682 add127530fa3fadc1f64d29ebbc790ba 703 SMART SM00829 75 264 7.8E-4 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SYN_02682 add127530fa3fadc1f64d29ebbc790ba 703 Gene3D G3DSA:3.30.360.10 505 699 4.1E-29 T 11-10-2018 SYN_02682 add127530fa3fadc1f64d29ebbc790ba 703 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 388 505 4.5E-17 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 SYN_02682 add127530fa3fadc1f64d29ebbc790ba 703 SUPERFAMILY SSF51735 387 543 3.57E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_02682 add127530fa3fadc1f64d29ebbc790ba 703 Gene3D G3DSA:3.40.50.720 377 497 3.6E-22 T 11-10-2018 SYN_02682 add127530fa3fadc1f64d29ebbc790ba 703 SUPERFAMILY SSF50129 9 176 3.28E-24 T 11-10-2018 IPR011032 GroES-like superfamily SYN_02682 add127530fa3fadc1f64d29ebbc790ba 703 Gene3D G3DSA:3.90.180.10 121 350 1.2E-40 T 11-10-2018 SYN_02682 add127530fa3fadc1f64d29ebbc790ba 703 SUPERFAMILY SSF55347 510 641 7.52E-15 T 11-10-2018 SYN_02682 add127530fa3fadc1f64d29ebbc790ba 703 Pfam PF00107 Zinc-binding dehydrogenase 178 297 2.6E-16 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SYN_02682 add127530fa3fadc1f64d29ebbc790ba 703 SUPERFAMILY SSF51735 141 297 1.53E-28 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_01886 8944afa5e112735aed12d2b790344cb8 453 SUPERFAMILY SSF52540 29 428 1.14E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01886 8944afa5e112735aed12d2b790344cb8 453 Pfam PF12696 TraM recognition site of TraD and TraG 305 416 8.1E-13 T 11-10-2018 IPR032689 TraD/TraG, TraM recognition site SYN_01886 8944afa5e112735aed12d2b790344cb8 453 Gene3D G3DSA:3.40.50.300 249 434 2.8E-24 T 11-10-2018 SYN_01886 8944afa5e112735aed12d2b790344cb8 453 Gene3D G3DSA:3.40.50.300 12 114 4.6E-11 T 11-10-2018 SYN_01918 398234f617691f2d833f098b93e156a8 677 SUPERFAMILY SSF52540 7 281 1.56E-103 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01918 398234f617691f2d833f098b93e156a8 677 Gene3D G3DSA:3.30.70.870 404 478 4.6E-29 T 11-10-2018 SYN_01918 398234f617691f2d833f098b93e156a8 677 Pfam PF14492 Elongation Factor G, domain II 404 476 7.8E-30 T 11-10-2018 SYN_01918 398234f617691f2d833f098b93e156a8 677 SMART SM00838 598 676 3.3E-30 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like SYN_01918 398234f617691f2d833f098b93e156a8 677 Gene3D G3DSA:3.30.70.240 602 672 5.8E-66 T 11-10-2018 SYN_01918 398234f617691f2d833f098b93e156a8 677 Pfam PF00679 Elongation factor G C-terminus 598 676 4.4E-25 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like SYN_01918 398234f617691f2d833f098b93e156a8 677 TIGRFAM TIGR00484 EF-G: translation elongation factor G 5 676 5.9E-281 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SYN_01918 398234f617691f2d833f098b93e156a8 677 Gene3D G3DSA:2.40.30.10 294 403 6.3E-39 T 11-10-2018 SYN_01918 398234f617691f2d833f098b93e156a8 677 PRINTS PR00315 GTP-binding elongation factor signature 130 139 3.4E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_01918 398234f617691f2d833f098b93e156a8 677 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.4E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_01918 398234f617691f2d833f098b93e156a8 677 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.4E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_01918 398234f617691f2d833f098b93e156a8 677 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.4E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_01918 398234f617691f2d833f098b93e156a8 677 PRINTS PR00315 GTP-binding elongation factor signature 12 25 3.4E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_01918 398234f617691f2d833f098b93e156a8 677 Pfam PF00009 Elongation factor Tu GTP binding domain 9 281 1.8E-69 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_01918 398234f617691f2d833f098b93e156a8 677 Gene3D G3DSA:3.30.230.10 482 676 5.8E-66 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SYN_01918 398234f617691f2d833f098b93e156a8 677 SUPERFAMILY SSF54211 477 595 1.54E-29 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SYN_01918 398234f617691f2d833f098b93e156a8 677 Hamap MF_00054_B Elongation factor G [fusA]. 6 676 101.893 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SYN_01918 398234f617691f2d833f098b93e156a8 677 SUPERFAMILY SSF54980 598 675 7.67E-23 T 11-10-2018 IPR035647 EF-G domain III/V-like SYN_01918 398234f617691f2d833f098b93e156a8 677 Pfam PF03764 Elongation factor G, domain IV 477 594 9.6E-24 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SYN_01918 398234f617691f2d833f098b93e156a8 677 SUPERFAMILY SSF54980 402 479 3.53E-23 T 11-10-2018 IPR035647 EF-G domain III/V-like SYN_01918 398234f617691f2d833f098b93e156a8 677 SUPERFAMILY SSF50447 247 400 2.36E-32 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily SYN_01918 398234f617691f2d833f098b93e156a8 677 Gene3D G3DSA:3.40.50.300 3 293 2.9E-112 T 11-10-2018 SYN_01918 398234f617691f2d833f098b93e156a8 677 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 180 2.3E-28 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 SYN_01918 398234f617691f2d833f098b93e156a8 677 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site SYN_01918 398234f617691f2d833f098b93e156a8 677 SMART SM00889 478 596 1.8E-37 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SYN_01918 398234f617691f2d833f098b93e156a8 677 Pfam PF03144 Elongation factor Tu domain 2 324 389 4.8E-14 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 SYN_02701 f6a7cb3f0524efcf80ac671cbc33c6c2 328 Gene3D G3DSA:3.30.70.660 170 309 1.3E-37 T 11-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 SYN_02701 f6a7cb3f0524efcf80ac671cbc33c6c2 328 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 69 301 1.6E-56 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SYN_02701 f6a7cb3f0524efcf80ac671cbc33c6c2 328 Pfam PF01416 tRNA pseudouridine synthase 204 307 4.6E-22 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SYN_02701 f6a7cb3f0524efcf80ac671cbc33c6c2 328 Pfam PF01416 tRNA pseudouridine synthase 72 165 2.5E-7 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SYN_02701 f6a7cb3f0524efcf80ac671cbc33c6c2 328 SUPERFAMILY SSF55120 65 310 1.21E-72 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 SYN_02701 f6a7cb3f0524efcf80ac671cbc33c6c2 328 Gene3D G3DSA:3.30.70.580 63 168 2.0E-33 T 11-10-2018 SYN_02701 f6a7cb3f0524efcf80ac671cbc33c6c2 328 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 65 306 33.106 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SYN_01802 f1d747f4d09dc81bf1724bfcecd766e4 432 SUPERFAMILY SSF102114 26 399 3.4E-71 T 11-10-2018 SYN_01802 f1d747f4d09dc81bf1724bfcecd766e4 432 Pfam PF04055 Radical SAM superfamily 42 204 3.4E-18 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_01802 f1d747f4d09dc81bf1724bfcecd766e4 432 Gene3D G3DSA:3.80.30.20 6 325 5.5E-69 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe SYN_01802 f1d747f4d09dc81bf1724bfcecd766e4 432 SMART SM00729 36 252 3.0E-37 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SYN_01974 d549671d15ad5456c5d9eb97adc90739 152 Gene3D G3DSA:1.10.1200.120 1 133 1.9E-34 T 11-10-2018 IPR036019 Gated mechanosensitive channel SYN_01974 d549671d15ad5456c5d9eb97adc90739 152 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 8.4E-13 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 SYN_01974 d549671d15ad5456c5d9eb97adc90739 152 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 101 8.4E-13 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 SYN_01974 d549671d15ad5456c5d9eb97adc90739 152 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 102 111 8.4E-13 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 SYN_01974 d549671d15ad5456c5d9eb97adc90739 152 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 134 1.2E-38 T 11-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L SYN_01974 d549671d15ad5456c5d9eb97adc90739 152 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 11 24 - T 11-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site SYN_01974 d549671d15ad5456c5d9eb97adc90739 152 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 127 7.1E-37 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 SYN_01974 d549671d15ad5456c5d9eb97adc90739 152 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 1 145 22.953 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 SYN_01974 d549671d15ad5456c5d9eb97adc90739 152 SUPERFAMILY SSF81330 10 136 8.11E-34 T 11-10-2018 IPR036019 Gated mechanosensitive channel SYN_02972 62f9479f70e6f349a6afde2fc5547f30 204 Pfam PF14520 Helix-hairpin-helix domain 72 130 2.1E-17 T 11-10-2018 SYN_02972 62f9479f70e6f349a6afde2fc5547f30 204 SUPERFAMILY SSF50249 1 63 1.03E-13 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_02972 62f9479f70e6f349a6afde2fc5547f30 204 SMART SM00278 73 92 260.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SYN_02972 62f9479f70e6f349a6afde2fc5547f30 204 SMART SM00278 108 127 0.21 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SYN_02972 62f9479f70e6f349a6afde2fc5547f30 204 SUPERFAMILY SSF47781 65 135 7.69E-21 T 11-10-2018 IPR010994 RuvA domain 2-like SYN_02972 62f9479f70e6f349a6afde2fc5547f30 204 Pfam PF01330 RuvA N terminal domain 1 60 4.1E-15 T 11-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 SYN_02972 62f9479f70e6f349a6afde2fc5547f30 204 SUPERFAMILY SSF46929 157 202 6.02E-9 T 11-10-2018 IPR036267 RuvA, C-terminal domain superfamily SYN_02972 62f9479f70e6f349a6afde2fc5547f30 204 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 203 29.445 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 SYN_02972 62f9479f70e6f349a6afde2fc5547f30 204 Gene3D G3DSA:1.10.150.20 67 141 3.6E-24 T 11-10-2018 SYN_02972 62f9479f70e6f349a6afde2fc5547f30 204 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 198 7.9E-47 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 SYN_02972 62f9479f70e6f349a6afde2fc5547f30 204 Pfam PF07499 RuvA, C-terminal domain 157 202 1.7E-10 T 11-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 SYN_02972 62f9479f70e6f349a6afde2fc5547f30 204 Gene3D G3DSA:2.40.50.140 1 66 8.9E-21 T 11-10-2018 SYN_02972 62f9479f70e6f349a6afde2fc5547f30 204 Gene3D G3DSA:1.10.8.10 153 202 5.6E-11 T 11-10-2018 SYN_02525 3c11f684b3962cf042c082171d2ff4ff 874 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 660 678 1.8E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 SYN_02525 3c11f684b3962cf042c082171d2ff4ff 874 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 615 633 1.8E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 SYN_02525 3c11f684b3962cf042c082171d2ff4ff 874 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 722 736 1.8E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 SYN_02525 3c11f684b3962cf042c082171d2ff4ff 874 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 689 707 1.8E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 SYN_02525 3c11f684b3962cf042c082171d2ff4ff 874 Gene3D G3DSA:3.40.50.300 161 353 1.7E-74 T 11-10-2018 SYN_02525 3c11f684b3962cf042c082171d2ff4ff 874 Gene3D G3DSA:1.10.8.60 778 872 1.1E-23 T 11-10-2018 SYN_02525 3c11f684b3962cf042c082171d2ff4ff 874 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 105 156 3.9E-11 T 11-10-2018 IPR004176 Clp, N-terminal SYN_02525 3c11f684b3962cf042c082171d2ff4ff 874 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 28 79 9.7E-13 T 11-10-2018 IPR004176 Clp, N-terminal SYN_02525 3c11f684b3962cf042c082171d2ff4ff 874 Gene3D G3DSA:3.40.50.300 564 776 1.5E-86 T 11-10-2018 SYN_02525 3c11f684b3962cf042c082171d2ff4ff 874 SUPERFAMILY SSF52540 170 559 6.98E-98 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02525 3c11f684b3962cf042c082171d2ff4ff 874 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 214 345 1.4E-12 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 SYN_02525 3c11f684b3962cf042c082171d2ff4ff 874 SUPERFAMILY SSF81923 15 167 1.2E-37 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 SYN_02525 3c11f684b3962cf042c082171d2ff4ff 874 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 305 317 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 SYN_02525 3c11f684b3962cf042c082171d2ff4ff 874 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 17 863 0.0 T 11-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 SYN_02525 3c11f684b3962cf042c082171d2ff4ff 874 Pfam PF07724 AAA domain (Cdc48 subfamily) 610 772 2.7E-55 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 SYN_02525 3c11f684b3962cf042c082171d2ff4ff 874 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 778 856 7.2E-23 T 11-10-2018 IPR019489 Clp ATPase, C-terminal SYN_02525 3c11f684b3962cf042c082171d2ff4ff 874 SMART SM01086 778 868 5.3E-30 T 11-10-2018 IPR019489 Clp ATPase, C-terminal SYN_02525 3c11f684b3962cf042c082171d2ff4ff 874 SMART SM00382 611 761 5.4E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_02525 3c11f684b3962cf042c082171d2ff4ff 874 SMART SM00382 209 355 2.7E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_02525 3c11f684b3962cf042c082171d2ff4ff 874 SUPERFAMILY SSF52540 560 863 5.85E-77 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02525 3c11f684b3962cf042c082171d2ff4ff 874 Gene3D G3DSA:3.40.50.300 354 558 5.0E-69 T 11-10-2018 SYN_02525 3c11f684b3962cf042c082171d2ff4ff 874 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 645 663 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 SYN_02525 3c11f684b3962cf042c082171d2ff4ff 874 Gene3D G3DSA:1.10.1780.10 12 160 8.9E-35 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 SYN_03199 3b9d86406029c1ab64a8107883464ce0 94 SUPERFAMILY SSF88659 41 84 1.55E-12 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like SYN_03199 3b9d86406029c1ab64a8107883464ce0 94 Pfam PF04545 Sigma-70, region 4 42 74 1.1E-13 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 SYN_03199 3b9d86406029c1ab64a8107883464ce0 94 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 46 72 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SYN_03199 3b9d86406029c1ab64a8107883464ce0 94 PRINTS PR00046 Major sigma-70 factor signature 46 61 6.1E-11 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SYN_03199 3b9d86406029c1ab64a8107883464ce0 94 PRINTS PR00046 Major sigma-70 factor signature 61 72 6.1E-11 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SYN_03199 3b9d86406029c1ab64a8107883464ce0 94 Gene3D G3DSA:1.10.10.10 37 85 1.7E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_01801 03360bdbca6464a6a8e9fd87d925522b 474 Pfam PF12390 Selenocysteine synthase N terminal 9 48 2.2E-5 T 11-10-2018 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 SYN_01801 03360bdbca6464a6a8e9fd87d925522b 474 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 9 462 1.5E-185 T 11-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 SYN_01801 03360bdbca6464a6a8e9fd87d925522b 474 Gene3D G3DSA:3.40.640.10 100 364 1.3E-168 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SYN_01801 03360bdbca6464a6a8e9fd87d925522b 474 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 471 207.302 T 11-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 SYN_01801 03360bdbca6464a6a8e9fd87d925522b 474 SUPERFAMILY SSF53383 81 463 1.99E-47 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SYN_01801 03360bdbca6464a6a8e9fd87d925522b 474 Pfam PF03841 L-seryl-tRNA selenium transferase 88 453 3.0E-153 T 11-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 SYN_01801 03360bdbca6464a6a8e9fd87d925522b 474 Gene3D G3DSA:3.90.1150.110 12 458 1.3E-168 T 11-10-2018 SYN_00144 a68fa7ef2ec86d7e4244b03d03391c8d 617 Gene3D G3DSA:1.20.950.20 342 580 6.9E-45 T 11-10-2018 SYN_00144 a68fa7ef2ec86d7e4244b03d03391c8d 617 Gene3D G3DSA:3.90.10.10 40 140 4.6E-7 T 11-10-2018 SYN_00144 a68fa7ef2ec86d7e4244b03d03391c8d 617 Pfam PF14537 Cytochrome c3 100 170 1.8E-5 T 11-10-2018 IPR012286 Tetrahaem cytochrome domain KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 SYN_00144 a68fa7ef2ec86d7e4244b03d03391c8d 617 SUPERFAMILY SSF48695 25 449 5.58E-56 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily SYN_02215 6be02e01bafd73d0b20b4ce1d38c8ddb 593 SUPERFAMILY SSF55785 236 349 3.14E-13 T 11-10-2018 IPR035965 PAS domain superfamily SYN_02215 6be02e01bafd73d0b20b4ce1d38c8ddb 593 SUPERFAMILY SSF103190 42 141 1.41E-5 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily SYN_02215 6be02e01bafd73d0b20b4ce1d38c8ddb 593 Pfam PF13426 PAS domain 258 350 7.9E-9 T 11-10-2018 IPR000014 PAS domain SYN_02215 6be02e01bafd73d0b20b4ce1d38c8ddb 593 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 559 3.8E-20 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_02215 6be02e01bafd73d0b20b4ce1d38c8ddb 593 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 578 3.8E-20 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_02215 6be02e01bafd73d0b20b4ce1d38c8ddb 593 PRINTS PR00344 Bacterial sensor protein C-terminal signature 530 540 3.8E-20 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_02215 6be02e01bafd73d0b20b4ce1d38c8ddb 593 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 526 3.8E-20 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_02215 6be02e01bafd73d0b20b4ce1d38c8ddb 593 SMART SM00388 366 432 7.0E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_02215 6be02e01bafd73d0b20b4ce1d38c8ddb 593 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 475 578 1.0E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_02215 6be02e01bafd73d0b20b4ce1d38c8ddb 593 Gene3D G3DSA:3.30.450.20 233 353 5.1E-14 T 11-10-2018 SYN_02215 6be02e01bafd73d0b20b4ce1d38c8ddb 593 SMART SM00387 474 581 1.6E-32 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_02215 6be02e01bafd73d0b20b4ce1d38c8ddb 593 Pfam PF00512 His Kinase A (phospho-acceptor) domain 368 428 7.3E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_02215 6be02e01bafd73d0b20b4ce1d38c8ddb 593 Gene3D G3DSA:3.30.565.10 431 590 1.1E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_02215 6be02e01bafd73d0b20b4ce1d38c8ddb 593 SUPERFAMILY SSF47384 359 428 1.2E-15 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SYN_02215 6be02e01bafd73d0b20b4ce1d38c8ddb 593 SUPERFAMILY SSF55874 422 579 3.67E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_02215 6be02e01bafd73d0b20b4ce1d38c8ddb 593 Gene3D G3DSA:1.10.287.130 354 429 2.2E-20 T 11-10-2018 SYN_02215 6be02e01bafd73d0b20b4ce1d38c8ddb 593 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 245 355 3.1E-9 T 11-10-2018 IPR000014 PAS domain SYN_02042 b5e68e87772d7295c2a7f0d8845a5e69 292 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 247 267 7.1E-28 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 SYN_02042 b5e68e87772d7295c2a7f0d8845a5e69 292 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 224 242 7.1E-28 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 SYN_02042 b5e68e87772d7295c2a7f0d8845a5e69 292 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 23 37 7.1E-28 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 SYN_02042 b5e68e87772d7295c2a7f0d8845a5e69 292 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 205 222 7.1E-28 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 SYN_02042 b5e68e87772d7295c2a7f0d8845a5e69 292 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 56 76 7.1E-28 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 SYN_02042 b5e68e87772d7295c2a7f0d8845a5e69 292 Gene3D G3DSA:3.40.50.150 3 291 1.2E-69 T 11-10-2018 SYN_02042 b5e68e87772d7295c2a7f0d8845a5e69 292 SUPERFAMILY SSF53335 7 267 7.19E-67 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_02042 b5e68e87772d7295c2a7f0d8845a5e69 292 ProSitePatterns PS00093 N-4 cytosine-specific DNA methylases signature. 28 33 - T 11-10-2018 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site GO:0003677|GO:0015667|GO:0090124 SYN_02042 b5e68e87772d7295c2a7f0d8845a5e69 292 Pfam PF01555 DNA methylase 24 264 1.7E-45 T 11-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 SYN_01789 0aa9d7d6285999bf60b20b53368e25ac 420 SUPERFAMILY SSF47794 355 408 3.92E-7 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 SYN_01789 0aa9d7d6285999bf60b20b53368e25ac 420 Gene3D G3DSA:3.30.1480.10 1 129 2.7E-38 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 SYN_01789 0aa9d7d6285999bf60b20b53368e25ac 420 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 7 342 2.2E-126 T 11-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 SYN_01789 0aa9d7d6285999bf60b20b53368e25ac 420 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 414 29.764 T 11-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 SYN_01789 0aa9d7d6285999bf60b20b53368e25ac 420 SUPERFAMILY SSF69705 1 127 1.44E-32 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 SYN_01789 0aa9d7d6285999bf60b20b53368e25ac 420 Pfam PF00575 S1 RNA binding domain 132 193 2.4E-7 T 11-10-2018 IPR003029 S1 domain GO:0003676 SYN_01789 0aa9d7d6285999bf60b20b53368e25ac 420 Pfam PF14520 Helix-hairpin-helix domain 353 407 7.0E-12 T 11-10-2018 SYN_01789 0aa9d7d6285999bf60b20b53368e25ac 420 SMART SM00316 134 200 5.8E-11 T 11-10-2018 IPR022967 RNA-binding domain, S1 SYN_01789 0aa9d7d6285999bf60b20b53368e25ac 420 Pfam PF08529 NusA N-terminal domain 4 125 4.6E-32 T 11-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 SYN_01789 0aa9d7d6285999bf60b20b53368e25ac 420 SUPERFAMILY SSF54814 279 341 1.24E-16 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 SYN_01789 0aa9d7d6285999bf60b20b53368e25ac 420 Pfam PF13184 NusA-like KH domain 230 297 2.1E-28 T 11-10-2018 IPR025249 KH domain, NusA-like GO:0003723 SYN_01789 0aa9d7d6285999bf60b20b53368e25ac 420 SMART SM00322 230 293 26.0 T 11-10-2018 IPR004087 K Homology domain GO:0003676 SYN_01789 0aa9d7d6285999bf60b20b53368e25ac 420 SMART SM00322 301 359 5.7E-4 T 11-10-2018 IPR004087 K Homology domain GO:0003676 SYN_01789 0aa9d7d6285999bf60b20b53368e25ac 420 Gene3D G3DSA:2.40.50.140 130 198 1.6E-25 T 11-10-2018 SYN_01789 0aa9d7d6285999bf60b20b53368e25ac 420 Gene3D G3DSA:3.30.300.20 278 420 1.3E-43 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta SYN_01789 0aa9d7d6285999bf60b20b53368e25ac 420 SUPERFAMILY SSF54814 200 278 1.05E-30 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 SYN_01789 0aa9d7d6285999bf60b20b53368e25ac 420 Gene3D G3DSA:3.30.300.20 199 277 1.5E-33 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta SYN_01789 0aa9d7d6285999bf60b20b53368e25ac 420 SUPERFAMILY SSF50249 132 199 3.51E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_02479 613dd6cc559c69926325923e8e262336 88 Gene3D G3DSA:3.30.420.10 25 85 1.3E-9 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 SYN_02479 613dd6cc559c69926325923e8e262336 88 SUPERFAMILY SSF53098 29 72 1.41E-9 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily SYN_02479 613dd6cc559c69926325923e8e262336 88 Pfam PF00929 Exonuclease 34 72 3.9E-6 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III SYN_02827 a37eec359ff202d1524342c1819a7531 261 SUPERFAMILY SSF88659 107 173 1.09E-11 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like SYN_02827 a37eec359ff202d1524342c1819a7531 261 SUPERFAMILY SSF88659 176 258 9.72E-20 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like SYN_02827 a37eec359ff202d1524342c1819a7531 261 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 29 254 6.3E-32 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 SYN_02827 a37eec359ff202d1524342c1819a7531 261 Gene3D G3DSA:1.20.140.160 105 258 6.6E-44 T 11-10-2018 SYN_02827 a37eec359ff202d1524342c1819a7531 261 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 61 74 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SYN_02827 a37eec359ff202d1524342c1819a7531 261 Pfam PF04542 Sigma-70 region 2 33 106 4.8E-14 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 SYN_02827 a37eec359ff202d1524342c1819a7531 261 Pfam PF04545 Sigma-70, region 4 205 254 9.3E-17 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 SYN_02827 a37eec359ff202d1524342c1819a7531 261 PRINTS PR00046 Major sigma-70 factor signature 209 221 1.6E-11 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SYN_02827 a37eec359ff202d1524342c1819a7531 261 PRINTS PR00046 Major sigma-70 factor signature 61 74 1.6E-11 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SYN_02827 a37eec359ff202d1524342c1819a7531 261 PRINTS PR00046 Major sigma-70 factor signature 226 241 1.6E-11 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SYN_02827 a37eec359ff202d1524342c1819a7531 261 PRINTS PR00046 Major sigma-70 factor signature 241 252 1.6E-11 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SYN_02827 a37eec359ff202d1524342c1819a7531 261 PIRSF PIRSF000770 8 259 1.6E-39 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SYN_02827 a37eec359ff202d1524342c1819a7531 261 Gene3D G3DSA:1.10.1740.10 18 103 5.2E-28 T 11-10-2018 SYN_02827 a37eec359ff202d1524342c1819a7531 261 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 226 252 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SYN_02827 a37eec359ff202d1524342c1819a7531 261 SUPERFAMILY SSF88946 21 106 5.81E-22 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 SYN_02827 a37eec359ff202d1524342c1819a7531 261 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 33 256 6.1E-75 T 11-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 SYN_02827 a37eec359ff202d1524342c1819a7531 261 Pfam PF04539 Sigma-70 region 3 116 166 8.4E-7 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 SYN_02616 afe99c3e5e2e787dffeded063505d8ff 427 PIRSF PIRSF000243 2 427 3.4E-135 T 11-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 SYN_02616 afe99c3e5e2e787dffeded063505d8ff 427 Gene3D G3DSA:1.10.1130.10 49 303 8.2E-123 T 11-10-2018 SYN_02616 afe99c3e5e2e787dffeded063505d8ff 427 SUPERFAMILY SSF48695 39 421 4.81E-140 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily SYN_02616 afe99c3e5e2e787dffeded063505d8ff 427 Pfam PF02335 Cytochrome c552 45 420 3.9E-128 T 11-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 SYN_02616 afe99c3e5e2e787dffeded063505d8ff 427 Gene3D G3DSA:1.20.140.10 304 422 8.2E-123 T 11-10-2018 SYN_01370 955a54c007494ccebb0c3911675a7bfe 605 SMART SM00902 521 581 9.8E-25 T 11-10-2018 IPR003149 Iron hydrogenase, small subunit SYN_01370 955a54c007494ccebb0c3911675a7bfe 605 TIGRFAM TIGR02512 FeFe_hydrog_A: [FeFe] hydrogenase, group A 147 520 3.1E-171 T 11-10-2018 IPR013352 Iron hydrogenase, subset GO:0005506|GO:0008901|GO:0051536|GO:0055114 SYN_01370 955a54c007494ccebb0c3911675a7bfe 605 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 90 129 1.9E-17 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_01370 955a54c007494ccebb0c3911675a7bfe 605 SUPERFAMILY SSF54862 82 223 5.44E-38 T 11-10-2018 SYN_01370 955a54c007494ccebb0c3911675a7bfe 605 Gene3D G3DSA:4.10.260.20 522 601 4.7E-18 T 11-10-2018 IPR036991 Iron hydrogenase, small subunit superfamily SYN_01370 955a54c007494ccebb0c3911675a7bfe 605 Gene3D G3DSA:3.40.50.1780 214 520 2.3E-162 T 11-10-2018 SYN_01370 955a54c007494ccebb0c3911675a7bfe 605 Gene3D G3DSA:3.30.70.20 150 213 2.3E-162 T 11-10-2018 SYN_01370 955a54c007494ccebb0c3911675a7bfe 605 SUPERFAMILY SSF54292 7 91 1.13E-15 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 SYN_01370 955a54c007494ccebb0c3911675a7bfe 605 SUPERFAMILY SSF53920 197 578 7.46E-132 T 11-10-2018 IPR009016 Iron hydrogenase SYN_01370 955a54c007494ccebb0c3911675a7bfe 605 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 232 516 1.8E-99 T 11-10-2018 IPR004108 Iron hydrogenase, large subunit, C-terminal SYN_01370 955a54c007494ccebb0c3911675a7bfe 605 SMART SM00929 90 130 2.6E-19 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_01370 955a54c007494ccebb0c3911675a7bfe 605 Gene3D G3DSA:3.10.20.740 7 130 1.4E-39 T 11-10-2018 SYN_01370 955a54c007494ccebb0c3911675a7bfe 605 Pfam PF00037 4Fe-4S binding domain 193 214 1.0E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_01370 955a54c007494ccebb0c3911675a7bfe 605 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 198 209 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_01370 955a54c007494ccebb0c3911675a7bfe 605 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 7 82 4.5E-16 T 11-10-2018 SYN_01370 955a54c007494ccebb0c3911675a7bfe 605 Pfam PF02256 Iron hydrogenase small subunit 524 580 1.1E-20 T 11-10-2018 IPR003149 Iron hydrogenase, small subunit SYN_01370 955a54c007494ccebb0c3911675a7bfe 605 Gene3D G3DSA:3.40.950.10 280 510 2.3E-162 T 11-10-2018 SYN_02594 8e72e2134bf1dec3b01fe20bb9a24c1c 650 Gene3D G3DSA:3.30.750.70 220 321 7.7E-34 T 11-10-2018 SYN_02594 8e72e2134bf1dec3b01fe20bb9a24c1c 650 SUPERFAMILY SSF100950 31 255 8.37E-37 T 11-10-2018 IPR037171 NagB/RpiA transferase-like SYN_02594 8e72e2134bf1dec3b01fe20bb9a24c1c 650 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 36 216 7.7E-46 T 11-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 SYN_02594 8e72e2134bf1dec3b01fe20bb9a24c1c 650 Gene3D G3DSA:3.40.630.30 477 647 8.8E-31 T 11-10-2018 SYN_02594 8e72e2134bf1dec3b01fe20bb9a24c1c 650 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 305 458 1.1E-60 T 11-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain SYN_02594 8e72e2134bf1dec3b01fe20bb9a24c1c 650 SUPERFAMILY SSF100950 226 480 1.65E-61 T 11-10-2018 IPR037171 NagB/RpiA transferase-like SYN_02594 8e72e2134bf1dec3b01fe20bb9a24c1c 650 Pfam PF00583 Acetyltransferase (GNAT) family 540 631 1.6E-8 T 11-10-2018 IPR000182 GNAT domain SYN_02594 8e72e2134bf1dec3b01fe20bb9a24c1c 650 Gene3D G3DSA:3.40.1080.20 323 472 1.2E-59 T 11-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily SYN_02594 8e72e2134bf1dec3b01fe20bb9a24c1c 650 Gene3D G3DSA:3.40.1080.10 28 217 3.4E-61 T 11-10-2018 SYN_02594 8e72e2134bf1dec3b01fe20bb9a24c1c 650 SUPERFAMILY SSF55729 488 637 2.06E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase SYN_03127 ff99bc0f8b6017c186f1227ce22e8d7a 409 Gene3D G3DSA:3.30.1490.110 84 166 6.0E-129 T 11-10-2018 SYN_03127 ff99bc0f8b6017c186f1227ce22e8d7a 409 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 7 375 9.0E-145 T 11-10-2018 IPR020823 Cell division protein FtsA SYN_03127 ff99bc0f8b6017c186f1227ce22e8d7a 409 Gene3D G3DSA:3.30.420.40 194 349 6.0E-129 T 11-10-2018 SYN_03127 ff99bc0f8b6017c186f1227ce22e8d7a 409 Hamap MF_02033 Cell division protein FtsA [ftsA]. 4 409 31.729 T 11-10-2018 IPR020823 Cell division protein FtsA SYN_03127 ff99bc0f8b6017c186f1227ce22e8d7a 409 SUPERFAMILY SSF53067 7 194 9.32E-60 T 11-10-2018 SYN_03127 ff99bc0f8b6017c186f1227ce22e8d7a 409 Pfam PF14450 Cell division protein FtsA 9 177 3.0E-12 T 11-10-2018 SYN_03127 ff99bc0f8b6017c186f1227ce22e8d7a 409 SMART SM00842 8 193 7.1E-99 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 SYN_03127 ff99bc0f8b6017c186f1227ce22e8d7a 409 Pfam PF14450 Cell division protein FtsA 204 371 2.1E-26 T 11-10-2018 SYN_03127 ff99bc0f8b6017c186f1227ce22e8d7a 409 Pfam PF02491 SHS2 domain inserted in FTSA 82 159 6.7E-32 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 SYN_03127 ff99bc0f8b6017c186f1227ce22e8d7a 409 PIRSF PIRSF003101 1 409 9.5E-155 T 11-10-2018 IPR020823 Cell division protein FtsA SYN_03127 ff99bc0f8b6017c186f1227ce22e8d7a 409 Gene3D G3DSA:3.90.640.10 232 297 6.0E-129 T 11-10-2018 SYN_03127 ff99bc0f8b6017c186f1227ce22e8d7a 409 SUPERFAMILY SSF53067 196 375 4.28E-48 T 11-10-2018 SYN_03127 ff99bc0f8b6017c186f1227ce22e8d7a 409 Gene3D G3DSA:3.30.420.40 11 368 6.0E-129 T 11-10-2018 SYN_02051 e369ef0ab6e21baf813337b277841e63 457 Gene3D G3DSA:1.10.8.60 285 353 1.8E-25 T 11-10-2018 SYN_02051 e369ef0ab6e21baf813337b277841e63 457 Gene3D G3DSA:1.10.1750.10 354 457 1.0E-31 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 SYN_02051 e369ef0ab6e21baf813337b277841e63 457 SMART SM00382 151 279 7.1E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_02051 e369ef0ab6e21baf813337b277841e63 457 ProSitePatterns PS01008 DnaA protein signature. 413 432 - T 11-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SYN_02051 e369ef0ab6e21baf813337b277841e63 457 SMART SM00760 363 432 8.2E-32 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SYN_02051 e369ef0ab6e21baf813337b277841e63 457 SUPERFAMILY SSF48295 350 453 2.17E-32 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 SYN_02051 e369ef0ab6e21baf813337b277841e63 457 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 152 172 5.7E-49 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like SYN_02051 e369ef0ab6e21baf813337b277841e63 457 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 413 432 5.7E-49 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like SYN_02051 e369ef0ab6e21baf813337b277841e63 457 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 250 277 5.7E-49 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like SYN_02051 e369ef0ab6e21baf813337b277841e63 457 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 184 198 5.7E-49 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like SYN_02051 e369ef0ab6e21baf813337b277841e63 457 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 216 230 5.7E-49 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like SYN_02051 e369ef0ab6e21baf813337b277841e63 457 Gene3D G3DSA:3.40.50.300 101 283 2.7E-49 T 11-10-2018 SYN_02051 e369ef0ab6e21baf813337b277841e63 457 Pfam PF11638 DnaA N-terminal domain 9 70 1.6E-17 T 11-10-2018 IPR024633 DnaA N-terminal domain SYN_02051 e369ef0ab6e21baf813337b277841e63 457 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 365 432 5.7E-27 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SYN_02051 e369ef0ab6e21baf813337b277841e63 457 Pfam PF00308 Bacterial dnaA protein 119 336 2.3E-92 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA SYN_02051 e369ef0ab6e21baf813337b277841e63 457 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 8 454 32.451 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SYN_02051 e369ef0ab6e21baf813337b277841e63 457 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 11 453 9.9E-169 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SYN_02051 e369ef0ab6e21baf813337b277841e63 457 SUPERFAMILY SSF52540 119 331 1.12E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02051 e369ef0ab6e21baf813337b277841e63 457 Gene3D G3DSA:3.30.300.180 6 85 5.0E-25 T 11-10-2018 IPR038454 DnaA, N-terminal domain superfamily SYN_00885 0e068ebf9f7e93c0ed6177d8fff8176b 65 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 64 19.005 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_00885 0e068ebf9f7e93c0ed6177d8fff8176b 65 Pfam PF00830 Ribosomal L28 family 3 59 9.5E-24 T 11-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00885 0e068ebf9f7e93c0ed6177d8fff8176b 65 Gene3D G3DSA:2.20.150.30 1 23 4.2E-5 T 11-10-2018 SYN_00885 0e068ebf9f7e93c0ed6177d8fff8176b 65 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 3.2E-24 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_00885 0e068ebf9f7e93c0ed6177d8fff8176b 65 SUPERFAMILY SSF143800 1 64 2.94E-26 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00885 0e068ebf9f7e93c0ed6177d8fff8176b 65 Gene3D G3DSA:2.30.170.40 24 65 2.5E-19 T 11-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01981 e44105b3bce53ec6a8f38d7665a129cf 213 Gene3D G3DSA:2.30.22.10 153 209 2.0E-21 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 SYN_01981 e44105b3bce53ec6a8f38d7665a129cf 213 SUPERFAMILY SSF51064 154 210 2.62E-16 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 SYN_01981 e44105b3bce53ec6a8f38d7665a129cf 213 SUPERFAMILY SSF58014 58 153 2.22E-25 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 SYN_01981 e44105b3bce53ec6a8f38d7665a129cf 213 Pfam PF01025 GrpE 48 209 5.4E-49 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 SYN_01981 e44105b3bce53ec6a8f38d7665a129cf 213 Gene3D G3DSA:3.90.20.20 23 152 3.6E-28 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 SYN_01981 e44105b3bce53ec6a8f38d7665a129cf 213 ProSitePatterns PS01071 grpE protein signature. 164 207 - T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 SYN_01981 e44105b3bce53ec6a8f38d7665a129cf 213 PRINTS PR00773 GrpE protein signature 107 122 2.8E-27 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 SYN_01981 e44105b3bce53ec6a8f38d7665a129cf 213 PRINTS PR00773 GrpE protein signature 188 207 2.8E-27 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 SYN_01981 e44105b3bce53ec6a8f38d7665a129cf 213 PRINTS PR00773 GrpE protein signature 161 176 2.8E-27 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 SYN_01981 e44105b3bce53ec6a8f38d7665a129cf 213 PRINTS PR00773 GrpE protein signature 79 95 2.8E-27 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 SYN_01981 e44105b3bce53ec6a8f38d7665a129cf 213 Hamap MF_01151 Protein GrpE [grpE]. 27 209 20.026 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 SYN_02803 b19670c8354ca6fc4574ab1d21971584 1052 Gene3D G3DSA:1.25.40.10 173 320 2.2E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_02803 b19670c8354ca6fc4574ab1d21971584 1052 Gene3D G3DSA:1.25.40.10 575 723 4.1E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_02803 b19670c8354ca6fc4574ab1d21971584 1052 SUPERFAMILY SSF48452 241 393 1.44E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_02803 b19670c8354ca6fc4574ab1d21971584 1052 Gene3D G3DSA:1.25.40.10 325 389 4.5E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_02803 b19670c8354ca6fc4574ab1d21971584 1052 SMART SM00028 902 935 0.0077 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_02803 b19670c8354ca6fc4574ab1d21971584 1052 SMART SM00028 868 901 0.054 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_02803 b19670c8354ca6fc4574ab1d21971584 1052 SMART SM00028 197 230 83.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_02803 b19670c8354ca6fc4574ab1d21971584 1052 SMART SM00028 238 271 40.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_02803 b19670c8354ca6fc4574ab1d21971584 1052 SMART SM00028 800 833 67.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_02803 b19670c8354ca6fc4574ab1d21971584 1052 SMART SM00028 834 867 85.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_02803 b19670c8354ca6fc4574ab1d21971584 1052 SMART SM00028 604 637 73.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_02803 b19670c8354ca6fc4574ab1d21971584 1052 SMART SM00028 324 357 4.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_02803 b19670c8354ca6fc4574ab1d21971584 1052 SMART SM00028 645 678 150.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_02803 b19670c8354ca6fc4574ab1d21971584 1052 SMART SM00028 731 764 16.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_02803 b19670c8354ca6fc4574ab1d21971584 1052 SMART SM00028 358 391 25.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_02803 b19670c8354ca6fc4574ab1d21971584 1052 Pfam PF00535 Glycosyl transferase family 2 9 135 5.2E-22 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 SYN_02803 b19670c8354ca6fc4574ab1d21971584 1052 Pfam PF00535 Glycosyl transferase family 2 416 541 5.2E-18 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 SYN_02803 b19670c8354ca6fc4574ab1d21971584 1052 Gene3D G3DSA:3.90.550.10 390 544 7.5E-22 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_02803 b19670c8354ca6fc4574ab1d21971584 1052 Gene3D G3DSA:3.90.550.10 4 157 1.1E-25 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_02803 b19670c8354ca6fc4574ab1d21971584 1052 Pfam PF13181 Tetratricopeptide repeat 904 932 0.0024 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_02803 b19670c8354ca6fc4574ab1d21971584 1052 Gene3D G3DSA:1.25.40.10 724 1048 3.7E-36 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_02803 b19670c8354ca6fc4574ab1d21971584 1052 SUPERFAMILY SSF53448 401 543 5.81E-25 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_02803 b19670c8354ca6fc4574ab1d21971584 1052 SUPERFAMILY SSF53448 3 144 2.44E-26 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_02803 b19670c8354ca6fc4574ab1d21971584 1052 SUPERFAMILY SSF48452 584 931 2.43E-24 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00348 6fe030b3532e0c40f298a28ad81c5e31 129 Gene3D G3DSA:3.20.20.70 1 98 2.9E-25 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_00348 6fe030b3532e0c40f298a28ad81c5e31 129 SUPERFAMILY SSF63892 1 92 3.53E-24 T 11-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 SYN_00348 6fe030b3532e0c40f298a28ad81c5e31 129 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 1 91 2.1E-22 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 SYN_00238 e899b0a8e09ff5018f8f97889db82316 121 Gene3D G3DSA:2.60.120.10 16 121 2.9E-23 T 11-10-2018 IPR014710 RmlC-like jelly roll fold SYN_00238 e899b0a8e09ff5018f8f97889db82316 121 Pfam PF07883 Cupin domain 44 110 2.3E-8 T 11-10-2018 IPR013096 Cupin 2, conserved barrel SYN_00238 e899b0a8e09ff5018f8f97889db82316 121 SUPERFAMILY SSF51182 15 115 3.48E-16 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily SYN_01924 b5c6def739030bf5d3111a968ac932f0 332 PRINTS PR00377 Inositol monophosphatase superfamily signature 110 126 7.5E-5 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 SYN_01924 b5c6def739030bf5d3111a968ac932f0 332 PRINTS PR00377 Inositol monophosphatase superfamily signature 64 84 7.5E-5 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 SYN_01924 b5c6def739030bf5d3111a968ac932f0 332 PRINTS PR00377 Inositol monophosphatase superfamily signature 274 298 7.5E-5 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 SYN_01924 b5c6def739030bf5d3111a968ac932f0 332 Gene3D G3DSA:3.30.540.10 6 191 3.9E-39 T 11-10-2018 SYN_01924 b5c6def739030bf5d3111a968ac932f0 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 31 58 2.6E-15 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 SYN_01924 b5c6def739030bf5d3111a968ac932f0 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 306 331 2.6E-15 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 SYN_01924 b5c6def739030bf5d3111a968ac932f0 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 68 94 2.6E-15 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 SYN_01924 b5c6def739030bf5d3111a968ac932f0 332 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 7 332 30.571 T 11-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 SYN_01924 b5c6def739030bf5d3111a968ac932f0 332 SUPERFAMILY SSF56655 7 330 1.44E-68 T 11-10-2018 SYN_01924 b5c6def739030bf5d3111a968ac932f0 332 PIRSF PIRSF000904 3 332 2.7E-68 T 11-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 SYN_01924 b5c6def739030bf5d3111a968ac932f0 332 Gene3D G3DSA:3.40.190.80 200 332 5.2E-37 T 11-10-2018 SYN_01924 b5c6def739030bf5d3111a968ac932f0 332 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 8 186 3.9E-34 T 11-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 SYN_01737 9567f07f37f1c3fdb88cf09494da3336 315 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 9 315 38.332 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 SYN_01737 9567f07f37f1c3fdb88cf09494da3336 315 Gene3D G3DSA:3.40.50.150 9 313 5.5E-101 T 11-10-2018 SYN_01737 9567f07f37f1c3fdb88cf09494da3336 315 Pfam PF01795 MraW methylase family 8 314 3.2E-116 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 SYN_01737 9567f07f37f1c3fdb88cf09494da3336 315 PIRSF PIRSF004486 4 315 6.6E-104 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 SYN_01737 9567f07f37f1c3fdb88cf09494da3336 315 SUPERFAMILY SSF53335 8 315 5.66E-42 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_01737 9567f07f37f1c3fdb88cf09494da3336 315 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 8 314 6.3E-109 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 SYN_01737 9567f07f37f1c3fdb88cf09494da3336 315 SUPERFAMILY SSF81799 118 219 1.7E-34 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 SYN_01737 9567f07f37f1c3fdb88cf09494da3336 315 Gene3D G3DSA:1.10.150.170 116 220 5.5E-101 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 SYN_02548 f4d3f5605757fd07f1a52b1188bf9257 249 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 167 173 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SYN_02548 f4d3f5605757fd07f1a52b1188bf9257 249 Pfam PF10237 Probable N6-adenine methyltransferase 89 245 4.1E-26 T 11-10-2018 SYN_01066 8880089d71b0137a14295ed5a7843cb9 400 Gene3D G3DSA:1.10.3210.10 1 388 1.2E-126 T 11-10-2018 SYN_01066 8880089d71b0137a14295ed5a7843cb9 400 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 15 388 37.49 T 11-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 SYN_01066 8880089d71b0137a14295ed5a7843cb9 400 SMART SM00471 72 213 3.7E-12 T 11-10-2018 IPR003607 HD/PDEase domain SYN_01066 8880089d71b0137a14295ed5a7843cb9 400 Pfam PF01966 HD domain 76 202 6.8E-17 T 11-10-2018 IPR006674 HD domain SYN_01066 8880089d71b0137a14295ed5a7843cb9 400 SUPERFAMILY SSF109604 34 392 2.09E-78 T 11-10-2018 SYN_01066 8880089d71b0137a14295ed5a7843cb9 400 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 39 174 4.5E-52 T 11-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 SYN_01066 8880089d71b0137a14295ed5a7843cb9 400 Pfam PF13286 Phosphohydrolase-associated domain 297 384 1.1E-23 T 11-10-2018 IPR026875 Phosphohydrolase-associated domain SYN_02653 e8c703d016e1bc01ec6294136090b405 380 SUPERFAMILY SSF53335 79 232 7.11E-22 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_02653 e8c703d016e1bc01ec6294136090b405 380 Gene3D G3DSA:3.40.50.720 286 374 2.5E-8 T 11-10-2018 SYN_02653 e8c703d016e1bc01ec6294136090b405 380 Gene3D G3DSA:3.40.50.150 73 233 3.9E-28 T 11-10-2018 SYN_02653 e8c703d016e1bc01ec6294136090b405 380 Pfam PF13489 Methyltransferase domain 100 230 1.5E-16 T 11-10-2018 SYN_02653 e8c703d016e1bc01ec6294136090b405 380 Pfam PF08484 C-methyltransferase C-terminal domain 292 363 5.2E-7 T 11-10-2018 IPR013691 C-methyltransferase SYN_01149 db7ba1b12ed2edbbe8c2490ee11dc8ac 335 SUPERFAMILY SSF53901 4 334 1.24E-33 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 SYN_01149 db7ba1b12ed2edbbe8c2490ee11dc8ac 335 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 119 186 2.4E-6 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 SYN_01149 db7ba1b12ed2edbbe8c2490ee11dc8ac 335 Gene3D G3DSA:3.40.47.10 3 335 1.1E-52 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 SYN_01149 db7ba1b12ed2edbbe8c2490ee11dc8ac 335 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 245 334 3.0E-14 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 SYN_01650 6de5b7956fc4eb8ad0d5d79da657e90a 661 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 291 305 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 SYN_01650 6de5b7956fc4eb8ad0d5d79da657e90a 661 SUPERFAMILY SSF51905 25 277 1.57E-39 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_01650 6de5b7956fc4eb8ad0d5d79da657e90a 661 Gene3D G3DSA:1.10.10.1800 477 583 9.1E-18 T 11-10-2018 SYN_01650 6de5b7956fc4eb8ad0d5d79da657e90a 661 Gene3D G3DSA:3.50.50.60 323 476 3.6E-57 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_01650 6de5b7956fc4eb8ad0d5d79da657e90a 661 Gene3D G3DSA:3.50.50.60 19 249 1.1E-85 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_01650 6de5b7956fc4eb8ad0d5d79da657e90a 661 Gene3D G3DSA:1.10.150.570 593 647 3.9E-20 T 11-10-2018 SYN_01650 6de5b7956fc4eb8ad0d5d79da657e90a 661 SMART SM01228 570 641 6.0E-37 T 11-10-2018 SYN_01650 6de5b7956fc4eb8ad0d5d79da657e90a 661 Pfam PF13932 GidA associated domain 419 639 2.2E-68 T 11-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 SYN_01650 6de5b7956fc4eb8ad0d5d79da657e90a 661 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 24 648 40.196 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 SYN_01650 6de5b7956fc4eb8ad0d5d79da657e90a 661 Pfam PF01134 Glucose inhibited division protein A 27 416 6.9E-154 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 SYN_01650 6de5b7956fc4eb8ad0d5d79da657e90a 661 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 26 646 5.7E-245 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 SYN_01650 6de5b7956fc4eb8ad0d5d79da657e90a 661 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 179 2.8E-5 T 11-10-2018 SYN_01650 6de5b7956fc4eb8ad0d5d79da657e90a 661 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 27 49 2.8E-5 T 11-10-2018 SYN_01650 6de5b7956fc4eb8ad0d5d79da657e90a 661 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 7.2E-5 T 11-10-2018 SYN_01650 6de5b7956fc4eb8ad0d5d79da657e90a 661 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 28 47 7.2E-5 T 11-10-2018 SYN_00963 872a8204d05b2c1481ae8a6e944be734 735 Gene3D G3DSA:1.10.287.560 349 411 2.0E-15 T 11-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 SYN_00963 872a8204d05b2c1481ae8a6e944be734 735 Gene3D G3DSA:3.30.565.10 412 596 8.4E-58 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_00963 872a8204d05b2c1481ae8a6e944be734 735 Gene3D G3DSA:1.20.120.160 149 289 2.5E-33 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 SYN_00963 872a8204d05b2c1481ae8a6e944be734 735 SUPERFAMILY SSF50341 596 729 1.18E-26 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 SYN_00963 872a8204d05b2c1481ae8a6e944be734 735 SMART SM00073 150 248 2.1E-24 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 SYN_00963 872a8204d05b2c1481ae8a6e944be734 735 SMART SM00387 456 597 8.0E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_00963 872a8204d05b2c1481ae8a6e944be734 735 Pfam PF01627 Hpt domain 154 252 9.6E-15 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 SYN_00963 872a8204d05b2c1481ae8a6e944be734 735 SUPERFAMILY SSF55874 413 595 1.05E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_00963 872a8204d05b2c1481ae8a6e944be734 735 SMART SM01231 349 411 1.0E-16 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SYN_00963 872a8204d05b2c1481ae8a6e944be734 735 Pfam PF01584 CheW-like domain 602 730 6.6E-18 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 SYN_00963 872a8204d05b2c1481ae8a6e944be734 735 SUPERFAMILY SSF160246 285 365 1.78E-6 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily SYN_00963 872a8204d05b2c1481ae8a6e944be734 735 SMART SM00260 589 729 2.4E-23 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 SYN_00963 872a8204d05b2c1481ae8a6e944be734 735 PRINTS PR00344 Bacterial sensor protein C-terminal signature 557 575 5.4E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_00963 872a8204d05b2c1481ae8a6e944be734 735 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 515 5.4E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_00963 872a8204d05b2c1481ae8a6e944be734 735 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 551 5.4E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_00963 872a8204d05b2c1481ae8a6e944be734 735 PRINTS PR00344 Bacterial sensor protein C-terminal signature 581 594 5.4E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_00963 872a8204d05b2c1481ae8a6e944be734 735 Gene3D G3DSA:2.40.50.180 620 684 1.9E-33 T 11-10-2018 SYN_00963 872a8204d05b2c1481ae8a6e944be734 735 SUPERFAMILY SSF47384 350 412 1.22E-11 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SYN_00963 872a8204d05b2c1481ae8a6e944be734 735 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 460 596 2.7E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_00963 872a8204d05b2c1481ae8a6e944be734 735 Gene3D G3DSA:2.30.30.40 597 724 1.9E-33 T 11-10-2018 SYN_00963 872a8204d05b2c1481ae8a6e944be734 735 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 350 407 3.2E-13 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 SYN_00963 872a8204d05b2c1481ae8a6e944be734 735 SUPERFAMILY SSF47226 151 253 5.89E-27 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 SYN_01091 79aa86b2640502e33e1f14a37cae51ed 456 Pfam PF02386 Cation transport protein 27 439 3.8E-59 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 SYN_01091 79aa86b2640502e33e1f14a37cae51ed 456 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 36 429 7.2E-103 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 SYN_00986 252a7e3d4fad67418bc2e2d28105873c 217 Gene3D G3DSA:3.40.1370.10 4 217 1.2E-74 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 SYN_00986 252a7e3d4fad67418bc2e2d28105873c 217 SUPERFAMILY SSF52166 11 215 3.92E-76 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 SYN_00986 252a7e3d4fad67418bc2e2d28105873c 217 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 19 216 34.579 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00986 252a7e3d4fad67418bc2e2d28105873c 217 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 27 212 3.4E-79 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00986 252a7e3d4fad67418bc2e2d28105873c 217 Pfam PF00573 Ribosomal protein L4/L1 family 27 213 1.0E-67 T 11-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 SYN_00372 6104cffad6844a1f06f6f0b123c5c6d5 975 Pfam PF04055 Radical SAM superfamily 85 225 2.0E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_00372 6104cffad6844a1f06f6f0b123c5c6d5 975 Gene3D G3DSA:3.20.20.70 76 369 3.8E-42 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_00372 6104cffad6844a1f06f6f0b123c5c6d5 975 Pfam PF13353 4Fe-4S single cluster domain 84 169 2.2E-5 T 11-10-2018 SYN_00372 6104cffad6844a1f06f6f0b123c5c6d5 975 SUPERFAMILY SSF102114 82 380 7.59E-48 T 11-10-2018 SYN_00372 6104cffad6844a1f06f6f0b123c5c6d5 975 Pfam PF13847 Methyltransferase domain 515 643 1.6E-24 T 11-10-2018 IPR025714 Methyltransferase domain SYN_00372 6104cffad6844a1f06f6f0b123c5c6d5 975 Gene3D G3DSA:3.40.50.150 485 698 1.3E-50 T 11-10-2018 SYN_00372 6104cffad6844a1f06f6f0b123c5c6d5 975 SUPERFAMILY SSF53335 503 674 4.73E-34 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_01628 05c54b1d1e382f1e764919aca7e1e09c 452 SUPERFAMILY SSF55931 115 450 8.73E-124 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 SYN_01628 05c54b1d1e382f1e764919aca7e1e09c 452 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 27 109 6.8E-27 T 11-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 SYN_01628 05c54b1d1e382f1e764919aca7e1e09c 452 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 239 254 - T 11-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 SYN_01628 05c54b1d1e382f1e764919aca7e1e09c 452 Gene3D G3DSA:3.30.590.10 118 451 1.0E-127 T 11-10-2018 SYN_01628 05c54b1d1e382f1e764919aca7e1e09c 452 Pfam PF00120 Glutamine synthetase, catalytic domain 116 448 1.9E-130 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SYN_01628 05c54b1d1e382f1e764919aca7e1e09c 452 SMART SM01230 115 362 2.4E-138 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SYN_01628 05c54b1d1e382f1e764919aca7e1e09c 452 SUPERFAMILY SSF54368 15 114 7.98E-31 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SYN_01628 05c54b1d1e382f1e764919aca7e1e09c 452 Gene3D G3DSA:3.10.20.70 13 117 1.6E-38 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SYN_02118 5d11cae64c96d62f1dc82ff6cc1586f8 305 Pfam PF00586 AIR synthase related protein, N-terminal domain 15 112 1.7E-18 T 11-10-2018 IPR016188 PurM-like, N-terminal domain SYN_02118 5d11cae64c96d62f1dc82ff6cc1586f8 305 SUPERFAMILY SSF56042 118 302 5.08E-49 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily SYN_02118 5d11cae64c96d62f1dc82ff6cc1586f8 305 TIGRFAM TIGR00476 selD: selenide, water dikinase 2 272 1.1E-103 T 11-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 SYN_02118 5d11cae64c96d62f1dc82ff6cc1586f8 305 PIRSF PIRSF036407 1 305 3.2E-107 T 11-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 SYN_02118 5d11cae64c96d62f1dc82ff6cc1586f8 305 Gene3D G3DSA:3.30.1330.10 1 118 2.7E-38 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily SYN_02118 5d11cae64c96d62f1dc82ff6cc1586f8 305 Gene3D G3DSA:3.90.650.10 119 305 8.5E-56 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily SYN_02118 5d11cae64c96d62f1dc82ff6cc1586f8 305 Pfam PF02769 AIR synthase related protein, C-terminal domain 124 304 9.3E-29 T 11-10-2018 IPR010918 PurM-like, C-terminal domain SYN_02118 5d11cae64c96d62f1dc82ff6cc1586f8 305 SUPERFAMILY SSF55326 3 116 2.75E-36 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily SYN_00015 4facd140383f3e280662a5bac9a096a6 182 TIGRFAM TIGR03830 CxxCG_CxxCG_HTH: putative zinc finger/helix-turn-helix protein, YgiT family 13 139 5.2E-41 T 11-10-2018 IPR022452 Antitoxin MqsA SYN_00015 4facd140383f3e280662a5bac9a096a6 182 SMART SM00530 82 139 8.7E-6 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SYN_00015 4facd140383f3e280662a5bac9a096a6 182 SUPERFAMILY SSF47413 79 138 2.31E-9 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 SYN_00015 4facd140383f3e280662a5bac9a096a6 182 Pfam PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA 12 138 1.8E-25 T 11-10-2018 IPR032758 Antitoxin MqsA/HigA-2 SYN_00015 4facd140383f3e280662a5bac9a096a6 182 Gene3D G3DSA:1.10.260.40 23 140 1.3E-29 T 11-10-2018 SYN_00015 4facd140383f3e280662a5bac9a096a6 182 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 13 57 2.5E-11 T 11-10-2018 IPR022453 Zinc finger, MqsA-type SYN_00228 a06f6ed78b5b9565e22663ba335ad9eb 148 Gene3D G3DSA:3.30.565.10 5 145 6.2E-24 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_00228 a06f6ed78b5b9565e22663ba335ad9eb 148 Pfam PF13581 Histidine kinase-like ATPase domain 12 139 4.1E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_00228 a06f6ed78b5b9565e22663ba335ad9eb 148 SUPERFAMILY SSF55874 33 132 1.83E-12 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_02779 9d7e32be71295efe879bb811c680411f 128 Gene3D G3DSA:3.90.470.20 1 123 8.9E-37 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 SYN_02779 9d7e32be71295efe879bb811c680411f 128 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 125 23.376 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 SYN_02779 9d7e32be71295efe879bb811c680411f 128 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 126 3.2E-29 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 SYN_02779 9d7e32be71295efe879bb811c680411f 128 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 124 7.0E-25 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 SYN_02779 9d7e32be71295efe879bb811c680411f 128 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 124 1.8E-25 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 SYN_02779 9d7e32be71295efe879bb811c680411f 128 SUPERFAMILY SSF56214 1 124 2.75E-30 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 SYN_02779 9d7e32be71295efe879bb811c680411f 128 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 104 3.6E-18 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 SYN_02809 2d81cedc27d1a003c154c59968f7736b 158 SUPERFAMILY SSF141457 2 143 1.26E-46 T 11-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily SYN_02809 2d81cedc27d1a003c154c59968f7736b 158 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 17 141 24.991 T 11-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 SYN_02809 2d81cedc27d1a003c154c59968f7736b 158 Pfam PF02623 FliW protein 21 138 2.0E-38 T 11-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 SYN_02809 2d81cedc27d1a003c154c59968f7736b 158 Gene3D G3DSA:2.30.290.10 1 146 3.1E-50 T 11-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily SYN_01036 15f6002b1f773c20d848a369597dcec3 895 PRINTS PR00906 SecA protein signature 375 397 5.8E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SYN_01036 15f6002b1f773c20d848a369597dcec3 895 PRINTS PR00906 SecA protein signature 117 141 5.8E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SYN_01036 15f6002b1f773c20d848a369597dcec3 895 PRINTS PR00906 SecA protein signature 155 169 5.8E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SYN_01036 15f6002b1f773c20d848a369597dcec3 895 PRINTS PR00906 SecA protein signature 171 181 5.8E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SYN_01036 15f6002b1f773c20d848a369597dcec3 895 PRINTS PR00906 SecA protein signature 412 429 5.8E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SYN_01036 15f6002b1f773c20d848a369597dcec3 895 PRINTS PR00906 SecA protein signature 224 244 5.8E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SYN_01036 15f6002b1f773c20d848a369597dcec3 895 PRINTS PR00906 SecA protein signature 449 462 5.8E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SYN_01036 15f6002b1f773c20d848a369597dcec3 895 Pfam PF02810 SEC-C motif 875 892 2.4E-10 T 11-10-2018 IPR004027 SEC-C motif SYN_01036 15f6002b1f773c20d848a369597dcec3 895 Pfam PF00271 Helicase conserved C-terminal domain 470 586 2.0E-4 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_01036 15f6002b1f773c20d848a369597dcec3 895 Gene3D G3DSA:1.10.3060.10 627 830 0.0 T 11-10-2018 SYN_01036 15f6002b1f773c20d848a369597dcec3 895 Gene3D G3DSA:3.10.450.50 833 894 2.9E-11 T 11-10-2018 SYN_01036 15f6002b1f773c20d848a369597dcec3 895 SUPERFAMILY SSF81767 281 404 4.45E-50 T 11-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 SYN_01036 15f6002b1f773c20d848a369597dcec3 895 Gene3D G3DSA:3.40.50.300 453 626 0.0 T 11-10-2018 SYN_01036 15f6002b1f773c20d848a369597dcec3 895 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 82 552 9.6E-246 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SYN_01036 15f6002b1f773c20d848a369597dcec3 895 SUPERFAMILY SSF52540 59 451 3.3E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01036 15f6002b1f773c20d848a369597dcec3 895 Pfam PF01043 SecA preprotein cross-linking domain 286 394 2.2E-45 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 SYN_01036 15f6002b1f773c20d848a369597dcec3 895 Gene3D G3DSA:3.40.50.300 70 452 0.0 T 11-10-2018 SYN_01036 15f6002b1f773c20d848a369597dcec3 895 Hamap MF_01382 Protein translocase subunit SecA [secA]. 59 836 20.746 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SYN_01036 15f6002b1f773c20d848a369597dcec3 895 SUPERFAMILY SSF81886 627 883 8.76E-80 T 11-10-2018 IPR036266 SecA, Wing/Scaffold superfamily SYN_01036 15f6002b1f773c20d848a369597dcec3 895 Pfam PF07516 SecA Wing and Scaffold domain 624 833 3.9E-71 T 11-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SYN_01036 15f6002b1f773c20d848a369597dcec3 895 Gene3D G3DSA:1.10.1200.230 677 760 0.0 T 11-10-2018 SYN_01036 15f6002b1f773c20d848a369597dcec3 895 Gene3D G3DSA:3.90.1440.10 283 404 0.0 T 11-10-2018 SYN_01036 15f6002b1f773c20d848a369597dcec3 895 SMART SM00957 60 438 0.0 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 SYN_01036 15f6002b1f773c20d848a369597dcec3 895 Pfam PF07517 SecA DEAD-like domain 60 438 1.3E-136 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 SYN_01036 15f6002b1f773c20d848a369597dcec3 895 ProSitePatterns PS01312 SecA family signature. 536 551 - T 11-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 SYN_01036 15f6002b1f773c20d848a369597dcec3 895 SMART SM00958 282 394 2.8E-77 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 SYN_01036 15f6002b1f773c20d848a369597dcec3 895 SUPERFAMILY SSF52540 453 625 1.48E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01369 c0fa9cbceba4ebdcee5247621f27ecd2 607 Gene3D G3DSA:3.10.20.600 406 500 2.7E-25 T 11-10-2018 SYN_01369 c0fa9cbceba4ebdcee5247621f27ecd2 607 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 8 152 3.3E-39 T 11-10-2018 SYN_01369 c0fa9cbceba4ebdcee5247621f27ecd2 607 Gene3D G3DSA:3.40.30.10 73 164 1.9E-26 T 11-10-2018 SYN_01369 c0fa9cbceba4ebdcee5247621f27ecd2 607 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 223 393 4.8E-52 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_01369 c0fa9cbceba4ebdcee5247621f27ecd2 607 Pfam PF10531 SLBB domain 417 462 1.2E-6 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_01369 c0fa9cbceba4ebdcee5247621f27ecd2 607 Gene3D G3DSA:1.20.1440.230 502 601 2.6E-26 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_01369 c0fa9cbceba4ebdcee5247621f27ecd2 607 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 506 588 7.0E-24 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_01369 c0fa9cbceba4ebdcee5247621f27ecd2 607 SMART SM00928 503 548 4.6E-16 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_01369 c0fa9cbceba4ebdcee5247621f27ecd2 607 SUPERFAMILY SSF140490 500 592 1.7E-27 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_01369 c0fa9cbceba4ebdcee5247621f27ecd2 607 Gene3D G3DSA:3.40.50.11540 228 405 2.8E-80 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_01369 c0fa9cbceba4ebdcee5247621f27ecd2 607 SUPERFAMILY SSF52833 4 157 3.69E-38 T 11-10-2018 IPR036249 Thioredoxin-like superfamily SYN_01369 c0fa9cbceba4ebdcee5247621f27ecd2 607 SUPERFAMILY SSF142019 178 414 1.44E-89 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_01369 c0fa9cbceba4ebdcee5247621f27ecd2 607 SUPERFAMILY SSF142984 415 497 3.53E-20 T 11-10-2018 SYN_00357 2223f5e6207e79d38e72c43a472972e9 531 Gene3D G3DSA:3.30.1360.170 300 512 2.5E-22 T 11-10-2018 SYN_00357 2223f5e6207e79d38e72c43a472972e9 531 SUPERFAMILY SSF69796 67 274 1.96E-29 T 11-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 SYN_00357 2223f5e6207e79d38e72c43a472972e9 531 SUPERFAMILY SSF69796 308 507 4.71E-26 T 11-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 SYN_00357 2223f5e6207e79d38e72c43a472972e9 531 Gene3D G3DSA:3.30.1360.170 54 272 7.9E-41 T 11-10-2018 SYN_00357 2223f5e6207e79d38e72c43a472972e9 531 Pfam PF02511 Thymidylate synthase complementing protein 317 505 7.8E-27 T 11-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 SYN_00357 2223f5e6207e79d38e72c43a472972e9 531 Pfam PF02511 Thymidylate synthase complementing protein 58 263 2.7E-31 T 11-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 SYN_02599 d6962291504e24ec203a5fc0a7b45861 287 Gene3D G3DSA:3.40.50.300 51 267 8.9E-49 T 11-10-2018 SYN_02599 d6962291504e24ec203a5fc0a7b45861 287 SUPERFAMILY SSF52540 51 277 2.21E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02599 d6962291504e24ec203a5fc0a7b45861 287 Pfam PF13245 AAA domain 63 246 1.6E-35 T 11-10-2018 SYN_00730 9a14cb7a5b5d448f570472c96d6be3d7 324 Gene3D G3DSA:3.30.2350.10 108 321 1.1E-59 T 11-10-2018 SYN_00730 9a14cb7a5b5d448f570472c96d6be3d7 324 Gene3D G3DSA:3.10.290.10 46 96 4.3E-12 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 SYN_00730 9a14cb7a5b5d448f570472c96d6be3d7 324 SUPERFAMILY SSF55174 49 129 3.53E-9 T 11-10-2018 SYN_00730 9a14cb7a5b5d448f570472c96d6be3d7 324 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 44 313 6.9E-59 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SYN_00730 9a14cb7a5b5d448f570472c96d6be3d7 324 SMART SM00363 44 103 1.8E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00730 9a14cb7a5b5d448f570472c96d6be3d7 324 Pfam PF01479 S4 domain 48 91 2.1E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00730 9a14cb7a5b5d448f570472c96d6be3d7 324 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 157 171 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SYN_00730 9a14cb7a5b5d448f570472c96d6be3d7 324 Pfam PF00849 RNA pseudouridylate synthase 115 263 9.9E-32 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SYN_00730 9a14cb7a5b5d448f570472c96d6be3d7 324 SUPERFAMILY SSF55120 107 316 4.8E-55 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 SYN_00625 15391ef726be78949742d99ee32a07c3 280 Gene3D G3DSA:3.30.70.20 219 255 5.8E-9 T 11-10-2018 SYN_00625 15391ef726be78949742d99ee32a07c3 280 SUPERFAMILY SSF54862 16 247 1.94E-17 T 11-10-2018 SYN_00625 15391ef726be78949742d99ee32a07c3 280 Pfam PF02662 Methyl-viologen-reducing hydrogenase, delta subunit 12 134 4.3E-45 T 11-10-2018 IPR003813 F420-non-reducing hydrogenase iron-sulfur subunit D GO:0055114 SYN_00625 15391ef726be78949742d99ee32a07c3 280 Pfam PF00037 4Fe-4S binding domain 198 220 7.7E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_00625 15391ef726be78949742d99ee32a07c3 280 Pfam PF00037 4Fe-4S binding domain 229 247 1.3E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_00625 15391ef726be78949742d99ee32a07c3 280 Gene3D G3DSA:3.30.70.20 189 218 2.4E-5 T 11-10-2018 SYN_00625 15391ef726be78949742d99ee32a07c3 280 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 235 246 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_03714 85dd5c78016ed3c9cffcd8882c22d752 127 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 31 5.2E-11 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site SYN_03714 85dd5c78016ed3c9cffcd8882c22d752 127 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 31 4.9E-11 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site SYN_03714 85dd5c78016ed3c9cffcd8882c22d752 127 SUPERFAMILY SSF54523 11 120 1.57E-16 T 11-10-2018 SYN_03714 85dd5c78016ed3c9cffcd8882c22d752 127 Gene3D G3DSA:3.30.700.10 11 127 1.5E-20 T 11-10-2018 SYN_03714 85dd5c78016ed3c9cffcd8882c22d752 127 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site SYN_01079 dc2d56aa9fb6ed679bfc03b8cc194ff9 498 Pfam PF00990 Diguanylate cyclase, GGDEF domain 332 491 3.0E-50 T 11-10-2018 IPR000160 GGDEF domain SYN_01079 dc2d56aa9fb6ed679bfc03b8cc194ff9 498 SMART SM00267 320 496 7.3E-67 T 11-10-2018 IPR000160 GGDEF domain SYN_01079 dc2d56aa9fb6ed679bfc03b8cc194ff9 498 Gene3D G3DSA:1.10.287.130 10 84 3.9E-9 T 11-10-2018 SYN_01079 dc2d56aa9fb6ed679bfc03b8cc194ff9 498 Pfam PF00072 Response regulator receiver domain 196 307 1.3E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_01079 dc2d56aa9fb6ed679bfc03b8cc194ff9 498 Pfam PF00512 His Kinase A (phospho-acceptor) domain 19 82 6.7E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_01079 dc2d56aa9fb6ed679bfc03b8cc194ff9 498 SUPERFAMILY SSF47384 17 82 5.1E-9 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SYN_01079 dc2d56aa9fb6ed679bfc03b8cc194ff9 498 SUPERFAMILY SSF52172 188 327 1.85E-38 T 11-10-2018 IPR011006 CheY-like superfamily SYN_01079 dc2d56aa9fb6ed679bfc03b8cc194ff9 498 SMART SM00388 15 83 5.3E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_01079 dc2d56aa9fb6ed679bfc03b8cc194ff9 498 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 327 494 1.9E-50 T 11-10-2018 IPR000160 GGDEF domain SYN_01079 dc2d56aa9fb6ed679bfc03b8cc194ff9 498 SMART SM00448 194 307 1.1E-36 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_01079 dc2d56aa9fb6ed679bfc03b8cc194ff9 498 Gene3D G3DSA:3.30.70.270 319 494 9.6E-59 T 11-10-2018 SYN_01079 dc2d56aa9fb6ed679bfc03b8cc194ff9 498 SUPERFAMILY SSF55073 336 493 4.16E-49 T 11-10-2018 IPR029787 Nucleotide cyclase SYN_01079 dc2d56aa9fb6ed679bfc03b8cc194ff9 498 Gene3D G3DSA:3.40.50.2300 179 318 3.9E-36 T 11-10-2018 SYN_00461 d2f2121d45a3b4c9846f5599de2c848a 345 Pfam PF02971 Formiminotransferase domain 220 311 1.8E-19 T 11-10-2018 IPR013802 Formiminotransferase, C-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 SYN_00461 d2f2121d45a3b4c9846f5599de2c848a 345 SUPERFAMILY SSF55116 39 217 9.68E-63 T 11-10-2018 IPR022384 Formiminotransferase catalytic domain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 SYN_00461 d2f2121d45a3b4c9846f5599de2c848a 345 Gene3D G3DSA:3.30.70.670 220 334 1.9E-31 T 11-10-2018 IPR037070 Formiminotransferase, C-terminal subdomain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 SYN_00461 d2f2121d45a3b4c9846f5599de2c848a 345 SUPERFAMILY SSF55116 219 334 1.54E-39 T 11-10-2018 IPR022384 Formiminotransferase catalytic domain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 SYN_00461 d2f2121d45a3b4c9846f5599de2c848a 345 TIGRFAM TIGR02024 FtcD: glutamate formiminotransferase 39 334 2.2E-108 T 11-10-2018 IPR004227 Formiminotransferase catalytic domain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 SYN_00461 d2f2121d45a3b4c9846f5599de2c848a 345 Pfam PF07837 Formiminotransferase domain, N-terminal subdomain 41 217 1.9E-64 T 11-10-2018 IPR012886 Formiminotransferase, N-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 SYN_00461 d2f2121d45a3b4c9846f5599de2c848a 345 SMART SM01222 40 218 8.6E-100 T 11-10-2018 IPR012886 Formiminotransferase, N-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 SYN_00461 d2f2121d45a3b4c9846f5599de2c848a 345 SMART SM01221 219 333 7.8E-60 T 11-10-2018 IPR013802 Formiminotransferase, C-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 SYN_00461 d2f2121d45a3b4c9846f5599de2c848a 345 Gene3D G3DSA:3.30.990.10 38 218 9.8E-65 T 11-10-2018 IPR037064 Formiminotransferase, N-terminal subdomain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 SYN_02947 e595f8b79ce17656496e4e7ac0954879 1054 Gene3D G3DSA:3.30.70.1430 567 668 0.0 T 11-10-2018 SYN_02947 e595f8b79ce17656496e4e7ac0954879 1054 Gene3D G3DSA:3.30.70.1430 38 817 0.0 T 11-10-2018 SYN_02947 e595f8b79ce17656496e4e7ac0954879 1054 SUPERFAMILY SSF82866 297 498 2.09E-48 T 11-10-2018 SYN_02947 e595f8b79ce17656496e4e7ac0954879 1054 SUPERFAMILY SSF82693 565 671 8.63E-27 T 11-10-2018 SYN_02947 e595f8b79ce17656496e4e7ac0954879 1054 SUPERFAMILY SSF82693 672 857 4.19E-25 T 11-10-2018 SYN_02947 e595f8b79ce17656496e4e7ac0954879 1054 Gene3D G3DSA:3.30.2090.10 721 809 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SYN_02947 e595f8b79ce17656496e4e7ac0954879 1054 Gene3D G3DSA:1.20.1640.10 513 1025 0.0 T 11-10-2018 SYN_02947 e595f8b79ce17656496e4e7ac0954879 1054 Gene3D G3DSA:3.30.70.1440 669 866 0.0 T 11-10-2018 SYN_02947 e595f8b79ce17656496e4e7ac0954879 1054 SUPERFAMILY SSF82866 831 1028 5.23E-44 T 11-10-2018 SYN_02947 e595f8b79ce17656496e4e7ac0954879 1054 Gene3D G3DSA:3.30.70.1320 133 333 0.0 T 11-10-2018 SYN_02947 e595f8b79ce17656496e4e7ac0954879 1054 Pfam PF00873 AcrB/AcrD/AcrF family 1 1028 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SYN_02947 e595f8b79ce17656496e4e7ac0954879 1054 SUPERFAMILY SSF82714 183 273 1.7E-20 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SYN_02947 e595f8b79ce17656496e4e7ac0954879 1054 SUPERFAMILY SSF82693 138 331 3.77E-22 T 11-10-2018 SYN_02947 e595f8b79ce17656496e4e7ac0954879 1054 SUPERFAMILY SSF82714 722 805 3.53E-20 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SYN_02947 e595f8b79ce17656496e4e7ac0954879 1054 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1047 0.0 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 SYN_02947 e595f8b79ce17656496e4e7ac0954879 1054 SUPERFAMILY SSF82693 38 130 8.89E-21 T 11-10-2018 SYN_02947 e595f8b79ce17656496e4e7ac0954879 1054 Gene3D G3DSA:1.20.1640.10 8 512 0.0 T 11-10-2018 SYN_02947 e595f8b79ce17656496e4e7ac0954879 1054 Gene3D G3DSA:3.30.2090.10 179 276 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SYN_02947 e595f8b79ce17656496e4e7ac0954879 1054 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 2.9E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SYN_02947 e595f8b79ce17656496e4e7ac0954879 1054 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 2.9E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SYN_02947 e595f8b79ce17656496e4e7ac0954879 1054 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 2.9E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SYN_02947 e595f8b79ce17656496e4e7ac0954879 1054 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.9E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SYN_02947 e595f8b79ce17656496e4e7ac0954879 1054 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.9E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SYN_02947 e595f8b79ce17656496e4e7ac0954879 1054 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.9E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SYN_02947 e595f8b79ce17656496e4e7ac0954879 1054 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 2.9E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SYN_02947 e595f8b79ce17656496e4e7ac0954879 1054 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 2.9E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SYN_02947 e595f8b79ce17656496e4e7ac0954879 1054 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.9E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SYN_00075 5d70729630963d930130c7866a94b2bb 769 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 307 767 2.2E-112 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 SYN_00075 5d70729630963d930130c7866a94b2bb 769 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 306 769 29.675 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 SYN_00075 5d70729630963d930130c7866a94b2bb 769 Gene3D G3DSA:3.40.50.1100 7 292 3.0E-110 T 11-10-2018 SYN_00075 5d70729630963d930130c7866a94b2bb 769 SUPERFAMILY SSF53686 3 301 4.32E-88 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme SYN_00075 5d70729630963d930130c7866a94b2bb 769 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 319 622 8.0E-81 T 11-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 SYN_00075 5d70729630963d930130c7866a94b2bb 769 Gene3D G3DSA:1.20.120.1910 617 768 1.9E-30 T 11-10-2018 SYN_00075 5d70729630963d930130c7866a94b2bb 769 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 530 551 3.0E-12 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SYN_00075 5d70729630963d930130c7866a94b2bb 769 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 329 340 3.0E-12 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SYN_00075 5d70729630963d930130c7866a94b2bb 769 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 365 374 3.0E-12 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SYN_00075 5d70729630963d930130c7866a94b2bb 769 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 499 517 3.0E-12 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SYN_00075 5d70729630963d930130c7866a94b2bb 769 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 298 2.7E-111 T 11-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 SYN_00075 5d70729630963d930130c7866a94b2bb 769 SUPERFAMILY SSF47323 634 768 5.36E-27 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_00075 5d70729630963d930130c7866a94b2bb 769 SUPERFAMILY SSF52374 307 623 9.47E-67 T 11-10-2018 SYN_00075 5d70729630963d930130c7866a94b2bb 769 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 287 8.2E-69 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme SYN_00075 5d70729630963d930130c7866a94b2bb 769 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 34 52 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 SYN_00075 5d70729630963d930130c7866a94b2bb 769 SMART SM00840 657 721 2.1E-13 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 SYN_00075 5d70729630963d930130c7866a94b2bb 769 Gene3D G3DSA:3.40.50.1100 46 146 3.0E-110 T 11-10-2018 SYN_00075 5d70729630963d930130c7866a94b2bb 769 Gene3D G3DSA:3.40.50.620 293 614 4.0E-95 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_00075 5d70729630963d930130c7866a94b2bb 769 Pfam PF09190 DALR domain 658 718 5.7E-11 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 SYN_00588 3a8ad65fad45442a476e1907c59ff404 217 Pfam PF00119 ATP synthase A chain 17 209 5.6E-59 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00588 3a8ad65fad45442a476e1907c59ff404 217 Hamap MF_01393 ATP synthase subunit a [atpB]. 1 216 16.281 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00588 3a8ad65fad45442a476e1907c59ff404 217 SUPERFAMILY SSF81336 64 209 9.55E-41 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00588 3a8ad65fad45442a476e1907c59ff404 217 ProSitePatterns PS00449 ATP synthase a subunit signature. 155 164 - T 11-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00588 3a8ad65fad45442a476e1907c59ff404 217 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 19 211 2.9E-44 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00588 3a8ad65fad45442a476e1907c59ff404 217 PRINTS PR00123 ATP synthase A subunit signature 132 147 1.2E-22 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00588 3a8ad65fad45442a476e1907c59ff404 217 PRINTS PR00123 ATP synthase A subunit signature 152 174 1.2E-22 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00588 3a8ad65fad45442a476e1907c59ff404 217 PRINTS PR00123 ATP synthase A subunit signature 73 89 1.2E-22 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00588 3a8ad65fad45442a476e1907c59ff404 217 PRINTS PR00123 ATP synthase A subunit signature 196 211 1.2E-22 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00588 3a8ad65fad45442a476e1907c59ff404 217 Gene3D G3DSA:1.20.120.220 65 217 1.6E-45 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02274 099c8ece17e93eff62f43cf53c6884f6 472 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 55 207 1.3E-43 T 11-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 SYN_02274 099c8ece17e93eff62f43cf53c6884f6 472 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 222 356 8.5E-45 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase SYN_02274 099c8ece17e93eff62f43cf53c6884f6 472 Gene3D G3DSA:3.30.460.30 51 209 3.3E-53 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 SYN_02274 099c8ece17e93eff62f43cf53c6884f6 472 Gene3D G3DSA:3.40.50.720 212 364 2.0E-47 T 11-10-2018 SYN_02274 099c8ece17e93eff62f43cf53c6884f6 472 SUPERFAMILY SSF69742 50 209 5.62E-44 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 SYN_02274 099c8ece17e93eff62f43cf53c6884f6 472 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 51 468 30.532 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 SYN_02274 099c8ece17e93eff62f43cf53c6884f6 472 PIRSF PIRSF000445 50 472 9.5E-166 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 SYN_02274 099c8ece17e93eff62f43cf53c6884f6 472 SUPERFAMILY SSF51735 213 365 1.58E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_02274 099c8ece17e93eff62f43cf53c6884f6 472 SUPERFAMILY SSF69075 368 471 9.02E-21 T 11-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 SYN_02274 099c8ece17e93eff62f43cf53c6884f6 472 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 371 470 2.1E-24 T 11-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 SYN_02274 099c8ece17e93eff62f43cf53c6884f6 472 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 52 471 5.2E-139 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 SYN_02274 099c8ece17e93eff62f43cf53c6884f6 472 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 150 173 - T 11-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 SYN_01013 c3b7dfa6b3f7b46ff36e68861fb35c89 74 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 10 73 4.5E-28 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor SYN_01013 c3b7dfa6b3f7b46ff36e68861fb35c89 74 SMART SM01234 6 73 8.5E-41 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor SYN_01013 c3b7dfa6b3f7b46ff36e68861fb35c89 74 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 22 73 1.0E-14 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor SYN_01013 c3b7dfa6b3f7b46ff36e68861fb35c89 74 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 6 74 23.726 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor SYN_01013 c3b7dfa6b3f7b46ff36e68861fb35c89 74 Pfam PF01809 Haemolytic domain 8 73 1.2E-29 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor SYN_02504 bb74e19554ecd570d8e3e759f1f74fac 452 Pfam PF06725 3D domain 355 434 3.4E-17 T 11-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 SYN_02504 bb74e19554ecd570d8e3e759f1f74fac 452 PIRSF PIRSF019422 2 447 2.6E-123 T 11-10-2018 IPR026044 Membrane-bound lytic murein transglycosylase A SYN_02504 bb74e19554ecd570d8e3e759f1f74fac 452 Pfam PF03562 MltA specific insert domain 104 337 6.3E-60 T 11-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 SYN_02504 bb74e19554ecd570d8e3e759f1f74fac 452 SUPERFAMILY SSF50685 94 438 8.72E-95 T 11-10-2018 IPR036908 RlpA-like domain superfamily SYN_02504 bb74e19554ecd570d8e3e759f1f74fac 452 SMART SM00925 190 337 3.2E-68 T 11-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 SYN_02504 bb74e19554ecd570d8e3e759f1f74fac 452 Gene3D G3DSA:2.40.240.50 189 341 1.9E-74 T 11-10-2018 SYN_02504 bb74e19554ecd570d8e3e759f1f74fac 452 Gene3D G3DSA:2.40.40.10 105 435 1.9E-74 T 11-10-2018 IPR036908 RlpA-like domain superfamily SYN_00121 774c9ed9edaa3d959534e04f6ef6bbd2 316 Gene3D G3DSA:1.10.150.130 54 165 1.8E-8 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal SYN_00121 774c9ed9edaa3d959534e04f6ef6bbd2 316 Gene3D G3DSA:1.10.443.10 170 315 9.1E-23 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 SYN_00121 774c9ed9edaa3d959534e04f6ef6bbd2 316 SUPERFAMILY SSF56349 60 313 5.0E-38 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SYN_00121 774c9ed9edaa3d959534e04f6ef6bbd2 316 Pfam PF00589 Phage integrase family 256 312 6.6E-11 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SYN_02454 9702f0b7f0e44f25d68c985f22a02ef0 577 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 283 33.06 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 SYN_02454 9702f0b7f0e44f25d68c985f22a02ef0 577 Gene3D G3DSA:3.40.1010.20 101 193 3.4E-98 T 11-10-2018 SYN_02454 9702f0b7f0e44f25d68c985f22a02ef0 577 Pfam PF01040 UbiA prenyltransferase family 316 547 2.3E-10 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 SYN_02454 9702f0b7f0e44f25d68c985f22a02ef0 577 Gene3D G3DSA:3.40.50.11270 12 100 3.4E-98 T 11-10-2018 SYN_02454 9702f0b7f0e44f25d68c985f22a02ef0 577 Gene3D G3DSA:3.40.1010.20 3 279 3.4E-98 T 11-10-2018 SYN_02454 9702f0b7f0e44f25d68c985f22a02ef0 577 Pfam PF02401 LytB protein 3 279 5.1E-90 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 SYN_02454 9702f0b7f0e44f25d68c985f22a02ef0 577 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3 281 5.3E-89 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 SYN_01538 fed810689f262ac1f0a6da61ff8b7edf 144 SUPERFAMILY SSF52402 2 143 3.77E-32 T 11-10-2018 SYN_01538 fed810689f262ac1f0a6da61ff8b7edf 144 Pfam PF00582 Universal stress protein family 1 143 1.6E-27 T 11-10-2018 IPR006016 UspA SYN_01538 fed810689f262ac1f0a6da61ff8b7edf 144 PRINTS PR01438 Universal stress protein signature 103 115 3.3E-21 T 11-10-2018 IPR006015 Universal stress protein A SYN_01538 fed810689f262ac1f0a6da61ff8b7edf 144 PRINTS PR01438 Universal stress protein signature 121 143 3.3E-21 T 11-10-2018 IPR006015 Universal stress protein A SYN_01538 fed810689f262ac1f0a6da61ff8b7edf 144 PRINTS PR01438 Universal stress protein signature 2 20 3.3E-21 T 11-10-2018 IPR006015 Universal stress protein A SYN_01538 fed810689f262ac1f0a6da61ff8b7edf 144 Gene3D G3DSA:3.40.50.620 1 144 1.1E-39 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_02654 b08f66274f071cfe1bf963be70dcd8b1 266 Gene3D G3DSA:3.40.50.150 49 234 1.9E-34 T 11-10-2018 SYN_02654 b08f66274f071cfe1bf963be70dcd8b1 266 SUPERFAMILY SSF53335 36 227 3.07E-35 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_02654 b08f66274f071cfe1bf963be70dcd8b1 266 Pfam PF04989 Cephalosporin hydroxylase 36 266 3.3E-88 T 11-10-2018 IPR007072 Rhamnosyl O-methyltransferase/Cephalosporin hydroxylase GO:0008168|GO:0008610 SYN_02030 d71f6d2c78c3d4ff2c1bab92c7f77d31 420 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 2 412 8.5E-88 T 11-10-2018 IPR008135 Competence-induced protein CinA SYN_02030 d71f6d2c78c3d4ff2c1bab92c7f77d31 420 Gene3D G3DSA:3.90.950.20 239 413 2.1E-56 T 11-10-2018 IPR036653 CinA-like, C-terminal SYN_02030 d71f6d2c78c3d4ff2c1bab92c7f77d31 420 Pfam PF02464 Competence-damaged protein 258 412 1.3E-54 T 11-10-2018 IPR008136 CinA, C-terminal SYN_02030 d71f6d2c78c3d4ff2c1bab92c7f77d31 420 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 420 137.957 T 11-10-2018 IPR008135 Competence-induced protein CinA SYN_02030 d71f6d2c78c3d4ff2c1bab92c7f77d31 420 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 264 411 2.6E-41 T 11-10-2018 IPR008136 CinA, C-terminal SYN_02030 d71f6d2c78c3d4ff2c1bab92c7f77d31 420 Pfam PF00994 Probable molybdopterin binding domain 4 169 9.2E-30 T 11-10-2018 IPR001453 MoaB/Mog domain SYN_02030 d71f6d2c78c3d4ff2c1bab92c7f77d31 420 SUPERFAMILY SSF142433 252 412 4.32E-52 T 11-10-2018 IPR036653 CinA-like, C-terminal SYN_02030 d71f6d2c78c3d4ff2c1bab92c7f77d31 420 SUPERFAMILY SSF53218 1 201 5.23E-35 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily SYN_02030 d71f6d2c78c3d4ff2c1bab92c7f77d31 420 Gene3D G3DSA:3.40.980.10 1 170 4.0E-44 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily SYN_02030 d71f6d2c78c3d4ff2c1bab92c7f77d31 420 SMART SM00852 4 170 1.1E-31 T 11-10-2018 IPR001453 MoaB/Mog domain SYN_02030 d71f6d2c78c3d4ff2c1bab92c7f77d31 420 PIRSF PIRSF006728 1 417 2.2E-117 T 11-10-2018 IPR008135 Competence-induced protein CinA SYN_00204 4faaa76a3876943ffc52ff9b463bb79c 311 SUPERFAMILY SSF46946 183 264 2.22E-21 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 SYN_00204 4faaa76a3876943ffc52ff9b463bb79c 311 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 51 310 2.1E-63 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 SYN_00204 4faaa76a3876943ffc52ff9b463bb79c 311 SUPERFAMILY SSF81624 52 176 2.09E-23 T 11-10-2018 IPR035937 MutM-like, N-terminal SYN_00204 4faaa76a3876943ffc52ff9b463bb79c 311 Pfam PF06827 Zinc finger found in FPG and IleRS 283 310 1.0E-10 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 SYN_00204 4faaa76a3876943ffc52ff9b463bb79c 311 ProSitePatterns PS01242 Zinc finger FPG-type signature. 286 310 - T 11-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 SYN_00204 4faaa76a3876943ffc52ff9b463bb79c 311 Gene3D G3DSA:1.10.8.50 177 311 2.5E-43 T 11-10-2018 SYN_00204 4faaa76a3876943ffc52ff9b463bb79c 311 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 183 259 3.1E-17 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 SYN_00204 4faaa76a3876943ffc52ff9b463bb79c 311 Gene3D G3DSA:3.20.190.10 52 174 3.4E-26 T 11-10-2018 IPR035937 MutM-like, N-terminal SYN_00204 4faaa76a3876943ffc52ff9b463bb79c 311 SMART SM00898 52 162 1.5E-27 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 SYN_00204 4faaa76a3876943ffc52ff9b463bb79c 311 SUPERFAMILY SSF57716 259 310 8.35E-16 T 11-10-2018 SYN_00204 4faaa76a3876943ffc52ff9b463bb79c 311 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 51 160 5.0E-21 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 SYN_00204 4faaa76a3876943ffc52ff9b463bb79c 311 SMART SM01232 172 263 4.6E-29 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 SYN_02082 2eed9fb91383cb5a9967949a25fb3643 1052 SUPERFAMILY SSF53955 143 360 2.64E-7 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily SYN_02082 2eed9fb91383cb5a9967949a25fb3643 1052 SUPERFAMILY SSF56601 725 990 1.95E-26 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like SYN_02082 2eed9fb91383cb5a9967949a25fb3643 1052 SUPERFAMILY SSF56601 555 618 5.04E-5 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like SYN_02082 2eed9fb91383cb5a9967949a25fb3643 1052 Gene3D G3DSA:3.40.710.10 785 999 8.0E-18 T 11-10-2018 SYN_02082 2eed9fb91383cb5a9967949a25fb3643 1052 Pfam PF00912 Transglycosylase 134 341 3.1E-22 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SYN_00304 e162800edcb786855583cc1dee747ce0 674 SUPERFAMILY SSF56601 224 648 1.18E-134 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like SYN_00304 e162800edcb786855583cc1dee747ce0 674 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 78 611 4.8E-199 T 11-10-2018 SYN_00304 e162800edcb786855583cc1dee747ce0 674 Pfam PF00912 Transglycosylase 68 242 1.2E-65 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SYN_00304 e162800edcb786855583cc1dee747ce0 674 Gene3D G3DSA:3.40.710.10 267 637 8.4E-135 T 11-10-2018 SYN_00304 e162800edcb786855583cc1dee747ce0 674 Pfam PF00905 Penicillin binding protein transpeptidase domain 336 573 1.4E-39 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SYN_00304 e162800edcb786855583cc1dee747ce0 674 SUPERFAMILY SSF53955 55 266 2.64E-76 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily SYN_00304 e162800edcb786855583cc1dee747ce0 674 Gene3D G3DSA:1.10.3810.10 61 258 3.1E-78 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SYN_00222 677ab34b9678e114aa830d52ddca6e70 270 Gene3D G3DSA:3.40.50.1860 100 212 1.8E-91 T 11-10-2018 SYN_00222 677ab34b9678e114aa830d52ddca6e70 270 Pfam PF01177 Asp/Glu/Hydantoin racemase 11 220 5.0E-34 T 11-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SYN_00222 677ab34b9678e114aa830d52ddca6e70 270 Gene3D G3DSA:3.40.50.1860 11 259 1.8E-91 T 11-10-2018 SYN_00222 677ab34b9678e114aa830d52ddca6e70 270 Hamap MF_00258 Glutamate racemase [murI]. 9 261 36.057 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SYN_00222 677ab34b9678e114aa830d52ddca6e70 270 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 185 195 - T 11-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SYN_00222 677ab34b9678e114aa830d52ddca6e70 270 SUPERFAMILY SSF53681 10 112 4.9E-33 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SYN_00222 677ab34b9678e114aa830d52ddca6e70 270 SUPERFAMILY SSF53681 115 266 1.09E-40 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SYN_00222 677ab34b9678e114aa830d52ddca6e70 270 TIGRFAM TIGR00067 glut_race: glutamate racemase 11 258 6.2E-70 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SYN_01717 660c4397a3d8e894976fbf587b83ec92 645 Pfam PF03129 Anticodon binding domain 550 640 1.8E-20 T 11-10-2018 IPR004154 Anticodon-binding SYN_01717 660c4397a3d8e894976fbf587b83ec92 645 SUPERFAMILY SSF55681 252 535 4.11E-90 T 11-10-2018 SYN_01717 660c4397a3d8e894976fbf587b83ec92 645 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 333 538 2.0E-37 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_01717 660c4397a3d8e894976fbf587b83ec92 645 SUPERFAMILY SSF52954 538 643 1.22E-31 T 11-10-2018 SYN_01717 660c4397a3d8e894976fbf587b83ec92 645 Gene3D G3DSA:3.40.50.800 541 644 1.1E-32 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily SYN_01717 660c4397a3d8e894976fbf587b83ec92 645 SMART SM00863 179 228 1.2E-24 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 SYN_01717 660c4397a3d8e894976fbf587b83ec92 645 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 179 228 1.6E-16 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 SYN_01717 660c4397a3d8e894976fbf587b83ec92 645 Gene3D G3DSA:3.30.54.20 139 196 3.4E-65 T 11-10-2018 SYN_01717 660c4397a3d8e894976fbf587b83ec92 645 Gene3D G3DSA:3.30.980.10 78 230 3.4E-65 T 11-10-2018 SYN_01717 660c4397a3d8e894976fbf587b83ec92 645 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 75 643 34.512 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SYN_01717 660c4397a3d8e894976fbf587b83ec92 645 SUPERFAMILY SSF55186 73 250 1.7E-66 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 SYN_01717 660c4397a3d8e894976fbf587b83ec92 645 SUPERFAMILY SSF81271 11 69 3.14E-8 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SYN_01717 660c4397a3d8e894976fbf587b83ec92 645 Gene3D G3DSA:3.10.20.30 8 69 3.2E-11 T 11-10-2018 IPR012675 Beta-grasp domain superfamily SYN_01717 660c4397a3d8e894976fbf587b83ec92 645 PRINTS PR01047 Threonyl-tRNA synthetase signature 543 555 7.1E-50 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SYN_01717 660c4397a3d8e894976fbf587b83ec92 645 PRINTS PR01047 Threonyl-tRNA synthetase signature 473 501 7.1E-50 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SYN_01717 660c4397a3d8e894976fbf587b83ec92 645 PRINTS PR01047 Threonyl-tRNA synthetase signature 516 529 7.1E-50 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SYN_01717 660c4397a3d8e894976fbf587b83ec92 645 PRINTS PR01047 Threonyl-tRNA synthetase signature 339 367 7.1E-50 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SYN_01717 660c4397a3d8e894976fbf587b83ec92 645 PRINTS PR01047 Threonyl-tRNA synthetase signature 372 395 7.1E-50 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SYN_01717 660c4397a3d8e894976fbf587b83ec92 645 Gene3D G3DSA:3.30.930.10 232 540 6.2E-123 T 11-10-2018 SYN_01717 660c4397a3d8e894976fbf587b83ec92 645 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 81 640 4.1E-223 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SYN_01241 536022bcc7b8e07b41fb4557e36f8570 155 SUPERFAMILY SSF54631 6 139 1.89E-32 T 11-10-2018 SYN_01241 536022bcc7b8e07b41fb4557e36f8570 155 SMART SM00116 16 67 1.6E-5 T 11-10-2018 IPR000644 CBS domain SYN_01241 536022bcc7b8e07b41fb4557e36f8570 155 SMART SM00116 85 133 1.1E-6 T 11-10-2018 IPR000644 CBS domain SYN_01241 536022bcc7b8e07b41fb4557e36f8570 155 Pfam PF00571 CBS domain 9 65 3.5E-11 T 11-10-2018 IPR000644 CBS domain SYN_01241 536022bcc7b8e07b41fb4557e36f8570 155 Pfam PF00571 CBS domain 78 133 1.9E-12 T 11-10-2018 IPR000644 CBS domain SYN_01241 536022bcc7b8e07b41fb4557e36f8570 155 Gene3D G3DSA:3.10.580.10 2 153 2.2E-39 T 11-10-2018 SYN_01997 2406985c0695b51f20b01cf0223dab43 150 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 58 146 3.3E-26 T 11-10-2018 IPR012997 Rare lipoprotein A SYN_01997 2406985c0695b51f20b01cf0223dab43 150 Gene3D G3DSA:2.40.40.10 56 147 1.2E-27 T 11-10-2018 IPR036908 RlpA-like domain superfamily SYN_01997 2406985c0695b51f20b01cf0223dab43 150 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 9 148 17.165 T 11-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 SYN_01997 2406985c0695b51f20b01cf0223dab43 150 SUPERFAMILY SSF50685 70 143 1.81E-12 T 11-10-2018 IPR036908 RlpA-like domain superfamily SYN_01997 2406985c0695b51f20b01cf0223dab43 150 Pfam PF03330 Lytic transglycolase 57 145 6.1E-21 T 11-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain SYN_00420 f26bb33e6293f949aa78d4468545237f 292 Pfam PF02569 Pantoate-beta-alanine ligase 8 283 1.4E-103 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 SYN_00420 f26bb33e6293f949aa78d4468545237f 292 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 7 284 5.5E-103 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 SYN_00420 f26bb33e6293f949aa78d4468545237f 292 Hamap MF_00158 Pantothenate synthetase [panC]. 8 285 38.951 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 SYN_00420 f26bb33e6293f949aa78d4468545237f 292 Gene3D G3DSA:3.30.1300.10 184 283 9.9E-34 T 11-10-2018 SYN_00420 f26bb33e6293f949aa78d4468545237f 292 Gene3D G3DSA:3.40.50.620 3 180 1.4E-75 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_00420 f26bb33e6293f949aa78d4468545237f 292 SUPERFAMILY SSF52374 5 285 5.35E-107 T 11-10-2018 SYN_01301 b992c6cb56bfdd5154a611d8a57b0964 159 Pfam PF13424 Tetratricopeptide repeat 80 140 3.8E-10 T 11-10-2018 SYN_01301 b992c6cb56bfdd5154a611d8a57b0964 159 SUPERFAMILY SSF48452 36 144 3.08E-27 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_01301 b992c6cb56bfdd5154a611d8a57b0964 159 Pfam PF07719 Tetratricopeptide repeat 43 74 2.9E-5 T 11-10-2018 IPR013105 Tetratricopeptide repeat 2 SYN_01301 b992c6cb56bfdd5154a611d8a57b0964 159 Gene3D G3DSA:1.25.40.10 17 158 8.1E-30 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_01301 b992c6cb56bfdd5154a611d8a57b0964 159 SMART SM00028 77 110 2.5E-8 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01301 b992c6cb56bfdd5154a611d8a57b0964 159 SMART SM00028 43 76 0.03 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01301 b992c6cb56bfdd5154a611d8a57b0964 159 SMART SM00028 111 144 0.028 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_02795 4f35a833d807db0300b3a5918a668255 417 Pfam PF01546 Peptidase family M20/M25/M40 97 411 1.5E-28 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 SYN_02795 4f35a833d807db0300b3a5918a668255 417 Gene3D G3DSA:3.40.630.10 42 399 8.4E-67 T 11-10-2018 SYN_02795 4f35a833d807db0300b3a5918a668255 417 SUPERFAMILY SSF53187 8 411 1.37E-51 T 11-10-2018 SYN_02795 4f35a833d807db0300b3a5918a668255 417 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 37 405 1.3E-66 T 11-10-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase SYN_02795 4f35a833d807db0300b3a5918a668255 417 Pfam PF07687 Peptidase dimerisation domain 205 313 3.2E-15 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain SYN_02795 4f35a833d807db0300b3a5918a668255 417 Gene3D G3DSA:3.30.70.360 209 330 8.4E-67 T 11-10-2018 SYN_02795 4f35a833d807db0300b3a5918a668255 417 SUPERFAMILY SSF55031 211 321 5.53E-19 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain SYN_02220 d09904d97f230cd0d13895a07593405c 304 Pfam PF00175 Oxidoreductase NAD-binding domain 142 244 9.2E-14 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 SYN_02220 d09904d97f230cd0d13895a07593405c 304 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 141 160 5.4E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SYN_02220 d09904d97f230cd0d13895a07593405c 304 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 167 176 5.4E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SYN_02220 d09904d97f230cd0d13895a07593405c 304 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 179 190 5.4E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 SYN_02220 d09904d97f230cd0d13895a07593405c 304 Pfam PF00970 Oxidoreductase FAD-binding domain 43 128 8.6E-7 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 SYN_02220 d09904d97f230cd0d13895a07593405c 304 Gene3D G3DSA:2.40.30.10 35 128 8.2E-16 T 11-10-2018 SYN_02220 d09904d97f230cd0d13895a07593405c 304 SUPERFAMILY SSF63380 38 130 1.97E-20 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel SYN_02220 d09904d97f230cd0d13895a07593405c 304 SUPERFAMILY SSF52343 125 298 3.14E-30 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain SYN_02220 d09904d97f230cd0d13895a07593405c 304 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 263 298 1.4E-11 T 11-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain SYN_02220 d09904d97f230cd0d13895a07593405c 304 Gene3D G3DSA:3.40.50.80 133 260 4.2E-22 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain SYN_02220 d09904d97f230cd0d13895a07593405c 304 PRINTS PR00406 Cytochrome B5 reductase signature 231 239 4.5E-6 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 SYN_02220 d09904d97f230cd0d13895a07593405c 304 PRINTS PR00406 Cytochrome B5 reductase signature 117 131 4.5E-6 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 SYN_02220 d09904d97f230cd0d13895a07593405c 304 PRINTS PR00406 Cytochrome B5 reductase signature 141 160 4.5E-6 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 SYN_02220 d09904d97f230cd0d13895a07593405c 304 PRINTS PR00406 Cytochrome B5 reductase signature 179 190 4.5E-6 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 SYN_02220 d09904d97f230cd0d13895a07593405c 304 PIRSF PIRSF006816 37 304 4.7E-72 T 11-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 SYN_02935 80ba424fb7e665ee5a3dd6abb7ac8cc1 672 SMART SM00292 595 672 1.8E-12 T 11-10-2018 IPR001357 BRCT domain SYN_02935 80ba424fb7e665ee5a3dd6abb7ac8cc1 672 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 336 351 - T 11-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site SYN_02935 80ba424fb7e665ee5a3dd6abb7ac8cc1 672 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 594 667 1.5E-15 T 11-10-2018 IPR001357 BRCT domain SYN_02935 80ba424fb7e665ee5a3dd6abb7ac8cc1 672 SMART SM00532 6 452 1.5E-254 T 11-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 SYN_02935 80ba424fb7e665ee5a3dd6abb7ac8cc1 672 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 326 402 8.1E-34 T 11-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 SYN_02935 80ba424fb7e665ee5a3dd6abb7ac8cc1 672 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 118 147 - T 11-10-2018 IPR018239 NAD-dependent DNA ligase, active site SYN_02935 80ba424fb7e665ee5a3dd6abb7ac8cc1 672 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 412 438 2.6E-11 T 11-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 SYN_02935 80ba424fb7e665ee5a3dd6abb7ac8cc1 672 PIRSF PIRSF001604 1 671 6.0E-255 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SYN_02935 80ba424fb7e665ee5a3dd6abb7ac8cc1 672 Pfam PF12826 Helix-hairpin-helix motif 515 577 4.3E-23 T 11-10-2018 SYN_02935 80ba424fb7e665ee5a3dd6abb7ac8cc1 672 Gene3D G3DSA:1.10.150.20 509 588 2.7E-26 T 11-10-2018 SYN_02935 80ba424fb7e665ee5a3dd6abb7ac8cc1 672 Gene3D G3DSA:3.40.50.10190 594 671 5.8E-28 T 11-10-2018 IPR036420 BRCT domain superfamily SYN_02935 80ba424fb7e665ee5a3dd6abb7ac8cc1 672 Gene3D G3DSA:2.20.70.80 396 434 3.8E-11 T 11-10-2018 SYN_02935 80ba424fb7e665ee5a3dd6abb7ac8cc1 672 Hamap MF_01588 DNA ligase [ligA]. 4 669 52.001 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SYN_02935 80ba424fb7e665ee5a3dd6abb7ac8cc1 672 Gene3D G3DSA:1.10.287.610 2 73 4.2E-28 T 11-10-2018 SYN_02935 80ba424fb7e665ee5a3dd6abb7ac8cc1 672 Gene3D G3DSA:1.10.150.20 436 508 9.8E-30 T 11-10-2018 SYN_02935 80ba424fb7e665ee5a3dd6abb7ac8cc1 672 Gene3D G3DSA:2.40.50.140 323 395 4.9E-32 T 11-10-2018 SYN_02935 80ba424fb7e665ee5a3dd6abb7ac8cc1 672 SUPERFAMILY SSF47781 409 587 7.78E-58 T 11-10-2018 IPR010994 RuvA domain 2-like SYN_02935 80ba424fb7e665ee5a3dd6abb7ac8cc1 672 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 14 665 7.2E-255 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SYN_02935 80ba424fb7e665ee5a3dd6abb7ac8cc1 672 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 6 322 1.6E-121 T 11-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 SYN_02935 80ba424fb7e665ee5a3dd6abb7ac8cc1 672 SUPERFAMILY SSF52113 593 668 1.51E-19 T 11-10-2018 IPR036420 BRCT domain superfamily SYN_02935 80ba424fb7e665ee5a3dd6abb7ac8cc1 672 SUPERFAMILY SSF56091 2 320 1.44E-114 T 11-10-2018 SYN_02935 80ba424fb7e665ee5a3dd6abb7ac8cc1 672 SUPERFAMILY SSF50249 323 406 1.88E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_02935 80ba424fb7e665ee5a3dd6abb7ac8cc1 672 Gene3D G3DSA:3.30.470.90 74 322 2.6E-97 T 11-10-2018 SYN_01460 f11b13df9314b2b83e701fa4f240b17b 270 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_01460 f11b13df9314b2b83e701fa4f240b17b 270 Pfam PF00005 ABC transporter 41 184 3.3E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_01460 f11b13df9314b2b83e701fa4f240b17b 270 Gene3D G3DSA:3.40.50.300 18 261 3.0E-62 T 11-10-2018 SYN_01460 f11b13df9314b2b83e701fa4f240b17b 270 SMART SM00382 49 255 1.1E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01460 f11b13df9314b2b83e701fa4f240b17b 270 SUPERFAMILY SSF52540 24 245 1.63E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02631 8cf6935735748ea18f05e387a881abeb 502 Pfam PF05552 Conserved TM helix 197 245 1.3E-16 T 11-10-2018 IPR008910 Conserved TM helix SYN_02631 8cf6935735748ea18f05e387a881abeb 502 Pfam PF05552 Conserved TM helix 106 154 4.2E-13 T 11-10-2018 IPR008910 Conserved TM helix SYN_02631 8cf6935735748ea18f05e387a881abeb 502 Pfam PF05552 Conserved TM helix 293 340 2.4E-12 T 11-10-2018 IPR008910 Conserved TM helix SYN_02631 8cf6935735748ea18f05e387a881abeb 502 Pfam PF05552 Conserved TM helix 12 58 9.9E-14 T 11-10-2018 IPR008910 Conserved TM helix SYN_01626 ccd64289d4bb7d13b0bd4b215d1308e6 510 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 198 510 7.6E-150 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 SYN_01626 ccd64289d4bb7d13b0bd4b215d1308e6 510 Gene3D G3DSA:3.40.50.620 194 390 2.4E-77 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_01626 ccd64289d4bb7d13b0bd4b215d1308e6 510 Pfam PF00117 Glutamine amidotransferase class-I 4 184 4.6E-42 T 11-10-2018 IPR017926 Glutamine amidotransferase SYN_01626 ccd64289d4bb7d13b0bd4b215d1308e6 510 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 73 89 3.5E-6 T 11-10-2018 SYN_01626 ccd64289d4bb7d13b0bd4b215d1308e6 510 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 43 57 3.5E-6 T 11-10-2018 SYN_01626 ccd64289d4bb7d13b0bd4b215d1308e6 510 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 2 16 3.5E-6 T 11-10-2018 SYN_01626 ccd64289d4bb7d13b0bd4b215d1308e6 510 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 2 189 3.9E-74 T 11-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 SYN_01626 ccd64289d4bb7d13b0bd4b215d1308e6 510 Gene3D G3DSA:3.30.300.10 391 510 6.8E-51 T 11-10-2018 SYN_01626 ccd64289d4bb7d13b0bd4b215d1308e6 510 Gene3D G3DSA:3.40.50.880 1 190 8.4E-55 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like SYN_01626 ccd64289d4bb7d13b0bd4b215d1308e6 510 SUPERFAMILY SSF52317 2 222 2.12E-54 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like SYN_01626 ccd64289d4bb7d13b0bd4b215d1308e6 510 Pfam PF00958 GMP synthase C terminal domain 418 509 5.9E-43 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 SYN_01626 ccd64289d4bb7d13b0bd4b215d1308e6 510 PRINTS PR00097 Anthranilate synthase component II signature 46 55 1.9E-6 T 11-10-2018 SYN_01626 ccd64289d4bb7d13b0bd4b215d1308e6 510 PRINTS PR00097 Anthranilate synthase component II signature 162 175 1.9E-6 T 11-10-2018 SYN_01626 ccd64289d4bb7d13b0bd4b215d1308e6 510 PRINTS PR00097 Anthranilate synthase component II signature 73 84 1.9E-6 T 11-10-2018 SYN_01626 ccd64289d4bb7d13b0bd4b215d1308e6 510 SUPERFAMILY SSF54810 390 510 8.63E-50 T 11-10-2018 SYN_01626 ccd64289d4bb7d13b0bd4b215d1308e6 510 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 1 510 54.31 T 11-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 SYN_01626 ccd64289d4bb7d13b0bd4b215d1308e6 510 Pfam PF02540 NAD synthase 197 241 1.7E-7 T 11-10-2018 IPR022310 NAD/GMP synthase SYN_01626 ccd64289d4bb7d13b0bd4b215d1308e6 510 SUPERFAMILY SSF52402 178 431 5.07E-56 T 11-10-2018 SYN_01626 ccd64289d4bb7d13b0bd4b215d1308e6 510 PRINTS PR00096 Glutamine amidotransferase superfamily signature 46 55 7.0E-8 T 11-10-2018 SYN_01626 ccd64289d4bb7d13b0bd4b215d1308e6 510 PRINTS PR00096 Glutamine amidotransferase superfamily signature 73 84 7.0E-8 T 11-10-2018 SYN_01626 ccd64289d4bb7d13b0bd4b215d1308e6 510 PRINTS PR00096 Glutamine amidotransferase superfamily signature 162 175 7.0E-8 T 11-10-2018 SYN_00183 aa3e665569fa150f1f1d0c8b36ae3257 187 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 59 3.3E-24 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like SYN_00183 aa3e665569fa150f1f1d0c8b36ae3257 187 PIRSF PIRSF005901 1 186 1.6E-66 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP SYN_00183 aa3e665569fa150f1f1d0c8b36ae3257 187 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 11-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site SYN_00183 aa3e665569fa150f1f1d0c8b36ae3257 187 TIGRFAM TIGR00038 efp: translation elongation factor P 2 185 3.6E-76 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 SYN_00183 aa3e665569fa150f1f1d0c8b36ae3257 187 Gene3D G3DSA:2.40.50.140 64 127 1.5E-24 T 11-10-2018 SYN_00183 aa3e665569fa150f1f1d0c8b36ae3257 187 Pfam PF09285 Elongation factor P, C-terminal 129 184 2.9E-25 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 SYN_00183 aa3e665569fa150f1f1d0c8b36ae3257 187 SUPERFAMILY SSF50249 65 126 4.28E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_00183 aa3e665569fa150f1f1d0c8b36ae3257 187 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 121 3.4E-21 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 SYN_00183 aa3e665569fa150f1f1d0c8b36ae3257 187 Hamap MF_00141 Elongation factor P [efp]. 1 185 44.838 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 SYN_00183 aa3e665569fa150f1f1d0c8b36ae3257 187 SUPERFAMILY SSF50104 1 62 6.52E-19 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily SYN_00183 aa3e665569fa150f1f1d0c8b36ae3257 187 SMART SM00841 129 184 3.8E-32 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 SYN_00183 aa3e665569fa150f1f1d0c8b36ae3257 187 Gene3D G3DSA:2.30.30.30 1 63 2.3E-24 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 SYN_00183 aa3e665569fa150f1f1d0c8b36ae3257 187 SUPERFAMILY SSF50249 128 185 1.1E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_00183 aa3e665569fa150f1f1d0c8b36ae3257 187 Gene3D G3DSA:2.40.50.140 128 186 2.7E-26 T 11-10-2018 SYN_00183 aa3e665569fa150f1f1d0c8b36ae3257 187 SMART SM01185 67 121 9.4E-26 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 SYN_02191 abe18cf12daf5baab83358daaa99d066 636 SUPERFAMILY SSF46785 587 634 2.61E-9 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_02191 abe18cf12daf5baab83358daaa99d066 636 SUPERFAMILY SSF50465 266 363 2.95E-21 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SYN_02191 abe18cf12daf5baab83358daaa99d066 636 Pfam PF09106 Elongation factor SelB, winged helix 451 505 7.6E-15 T 11-10-2018 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 SYN_02191 abe18cf12daf5baab83358daaa99d066 636 SUPERFAMILY SSF52540 2 168 6.8E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02191 abe18cf12daf5baab83358daaa99d066 636 SUPERFAMILY SSF50447 180 266 1.67E-24 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily SYN_02191 abe18cf12daf5baab83358daaa99d066 636 Gene3D G3DSA:1.10.10.10 575 634 8.6E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_02191 abe18cf12daf5baab83358daaa99d066 636 Gene3D G3DSA:1.10.10.2770 442 574 8.2E-38 T 11-10-2018 SYN_02191 abe18cf12daf5baab83358daaa99d066 636 Pfam PF03144 Elongation factor Tu domain 2 194 260 4.2E-8 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 SYN_02191 abe18cf12daf5baab83358daaa99d066 636 Pfam PF09107 Elongation factor SelB, winged helix 589 633 5.6E-15 T 11-10-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 SYN_02191 abe18cf12daf5baab83358daaa99d066 636 SUPERFAMILY SSF46785 512 575 2.0E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_02191 abe18cf12daf5baab83358daaa99d066 636 Gene3D G3DSA:2.40.30.10 177 296 2.2E-32 T 11-10-2018 SYN_02191 abe18cf12daf5baab83358daaa99d066 636 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 163 2.6E-14 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 SYN_02191 abe18cf12daf5baab83358daaa99d066 636 Gene3D G3DSA:3.40.50.300 2 169 5.6E-53 T 11-10-2018 SYN_02191 abe18cf12daf5baab83358daaa99d066 636 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 4 635 4.0E-112 T 11-10-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 SYN_02191 abe18cf12daf5baab83358daaa99d066 636 Pfam PF00009 Elongation factor Tu GTP binding domain 2 166 3.0E-35 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_02191 abe18cf12daf5baab83358daaa99d066 636 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 29 44 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site SYN_02191 abe18cf12daf5baab83358daaa99d066 636 PRINTS PR00315 GTP-binding elongation factor signature 110 119 5.5E-6 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_02191 abe18cf12daf5baab83358daaa99d066 636 PRINTS PR00315 GTP-binding elongation factor signature 5 18 5.5E-6 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_02191 abe18cf12daf5baab83358daaa99d066 636 PRINTS PR00315 GTP-binding elongation factor signature 73 84 5.5E-6 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_02191 abe18cf12daf5baab83358daaa99d066 636 PRINTS PR00315 GTP-binding elongation factor signature 57 67 5.5E-6 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_02191 abe18cf12daf5baab83358daaa99d066 636 SUPERFAMILY SSF46785 441 510 7.34E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_00558 b982095a0819f3afd9b41e150d0a4bc7 644 Gene3D G3DSA:2.170.220.10 126 236 8.9E-149 T 11-10-2018 SYN_00558 b982095a0819f3afd9b41e150d0a4bc7 644 Pfam PF09334 tRNA synthetases class I (M) 148 369 4.7E-62 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_00558 b982095a0819f3afd9b41e150d0a4bc7 644 Pfam PF08264 Anticodon-binding domain of tRNA 392 476 2.9E-7 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 SYN_00558 b982095a0819f3afd9b41e150d0a4bc7 644 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 15 517 3.6E-153 T 11-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SYN_00558 b982095a0819f3afd9b41e150d0a4bc7 644 Gene3D G3DSA:3.40.50.620 15 339 8.9E-149 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_00558 b982095a0819f3afd9b41e150d0a4bc7 644 Hamap MF_01228 Methionine--tRNA ligase [metG]. 11 515 45.748 T 11-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SYN_00558 b982095a0819f3afd9b41e150d0a4bc7 644 Gene3D G3DSA:1.10.730.10 346 527 2.0E-48 T 11-10-2018 SYN_00558 b982095a0819f3afd9b41e150d0a4bc7 644 Pfam PF01588 Putative tRNA binding domain 550 637 2.6E-23 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 SYN_00558 b982095a0819f3afd9b41e150d0a4bc7 644 SUPERFAMILY SSF47323 358 516 2.43E-37 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_00558 b982095a0819f3afd9b41e150d0a4bc7 644 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 529 644 1.1E-40 T 11-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SYN_00558 b982095a0819f3afd9b41e150d0a4bc7 644 PRINTS PR01041 Methionyl-tRNA synthetase signature 49 63 8.2E-32 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SYN_00558 b982095a0819f3afd9b41e150d0a4bc7 644 PRINTS PR01041 Methionyl-tRNA synthetase signature 265 280 8.2E-32 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SYN_00558 b982095a0819f3afd9b41e150d0a4bc7 644 PRINTS PR01041 Methionyl-tRNA synthetase signature 97 108 8.2E-32 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SYN_00558 b982095a0819f3afd9b41e150d0a4bc7 644 PRINTS PR01041 Methionyl-tRNA synthetase signature 234 245 8.2E-32 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SYN_00558 b982095a0819f3afd9b41e150d0a4bc7 644 PRINTS PR01041 Methionyl-tRNA synthetase signature 357 368 8.2E-32 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SYN_00558 b982095a0819f3afd9b41e150d0a4bc7 644 PRINTS PR01041 Methionyl-tRNA synthetase signature 17 30 8.2E-32 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SYN_00558 b982095a0819f3afd9b41e150d0a4bc7 644 Gene3D G3DSA:2.40.50.140 535 644 2.0E-33 T 11-10-2018 SYN_00558 b982095a0819f3afd9b41e150d0a4bc7 644 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 12 142 1.2E-11 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_00558 b982095a0819f3afd9b41e150d0a4bc7 644 SUPERFAMILY SSF50249 543 643 1.2E-26 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_00558 b982095a0819f3afd9b41e150d0a4bc7 644 SUPERFAMILY SSF52374 12 356 2.52E-112 T 11-10-2018 SYN_00061 d47106753332e5b4942fb3f90b4ed102 583 SUPERFAMILY SSF47384 343 423 8.04E-21 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SYN_00061 d47106753332e5b4942fb3f90b4ed102 583 Pfam PF08448 PAS fold 248 351 1.7E-8 T 11-10-2018 IPR013656 PAS fold-4 SYN_00061 d47106753332e5b4942fb3f90b4ed102 583 Gene3D G3DSA:1.20.1480.50 144 240 1.1E-6 T 11-10-2018 SYN_00061 d47106753332e5b4942fb3f90b4ed102 583 Gene3D G3DSA:3.30.565.10 426 581 3.9E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_00061 d47106753332e5b4942fb3f90b4ed102 583 SUPERFAMILY SSF158472 183 231 6.02E-6 T 11-10-2018 SYN_00061 d47106753332e5b4942fb3f90b4ed102 583 SMART SM00388 356 423 7.5E-23 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_00061 d47106753332e5b4942fb3f90b4ed102 583 Pfam PF00672 HAMP domain 183 226 1.0E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SYN_00061 d47106753332e5b4942fb3f90b4ed102 583 Pfam PF16736 Single Cache-like 65 145 8.6E-7 T 11-10-2018 IPR031967 PhoR, single Cache-like domain SYN_00061 d47106753332e5b4942fb3f90b4ed102 583 Gene3D G3DSA:1.10.287.130 349 425 5.7E-24 T 11-10-2018 SYN_00061 d47106753332e5b4942fb3f90b4ed102 583 PRINTS PR00344 Bacterial sensor protein C-terminal signature 567 580 1.5E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_00061 d47106753332e5b4942fb3f90b4ed102 583 PRINTS PR00344 Bacterial sensor protein C-terminal signature 543 561 1.5E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_00061 d47106753332e5b4942fb3f90b4ed102 583 PRINTS PR00344 Bacterial sensor protein C-terminal signature 508 522 1.5E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_00061 d47106753332e5b4942fb3f90b4ed102 583 PRINTS PR00344 Bacterial sensor protein C-terminal signature 526 536 1.5E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_00061 d47106753332e5b4942fb3f90b4ed102 583 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 240 355 4.2E-6 T 11-10-2018 IPR000014 PAS domain SYN_00061 d47106753332e5b4942fb3f90b4ed102 583 SUPERFAMILY SSF55874 412 579 1.44E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_00061 d47106753332e5b4942fb3f90b4ed102 583 Pfam PF00512 His Kinase A (phospho-acceptor) domain 357 421 1.8E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_00061 d47106753332e5b4942fb3f90b4ed102 583 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 470 579 2.3E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_00061 d47106753332e5b4942fb3f90b4ed102 583 SMART SM00091 241 307 9.4E-7 T 11-10-2018 IPR000014 PAS domain SYN_00061 d47106753332e5b4942fb3f90b4ed102 583 Gene3D G3DSA:3.30.450.20 243 348 4.9E-13 T 11-10-2018 SYN_00061 d47106753332e5b4942fb3f90b4ed102 583 SUPERFAMILY SSF55785 226 343 4.19E-13 T 11-10-2018 IPR035965 PAS domain superfamily SYN_00061 d47106753332e5b4942fb3f90b4ed102 583 SMART SM00304 182 234 2.9E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SYN_00061 d47106753332e5b4942fb3f90b4ed102 583 SMART SM00387 469 583 8.8E-37 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_02160 19c6903f7328e58113d70e8ecd8ff02e 427 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 279 6.7E-64 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 SYN_02160 19c6903f7328e58113d70e8ecd8ff02e 427 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 1.5E-30 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SYN_02160 19c6903f7328e58113d70e8ecd8ff02e 427 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 1.5E-30 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SYN_02160 19c6903f7328e58113d70e8ecd8ff02e 427 PRINTS PR01181 Diaminopimelate decarboxylase signature 298 316 1.5E-30 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SYN_02160 19c6903f7328e58113d70e8ecd8ff02e 427 PRINTS PR01181 Diaminopimelate decarboxylase signature 379 401 1.5E-30 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SYN_02160 19c6903f7328e58113d70e8ecd8ff02e 427 SUPERFAMILY SSF51419 26 282 1.02E-79 T 11-10-2018 IPR029066 PLP-binding barrel SYN_02160 19c6903f7328e58113d70e8ecd8ff02e 427 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 7 411 5.1E-158 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SYN_02160 19c6903f7328e58113d70e8ecd8ff02e 427 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 280 369 5.1E-27 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 SYN_02160 19c6903f7328e58113d70e8ecd8ff02e 427 Gene3D G3DSA:3.20.20.10 34 275 2.3E-153 T 11-10-2018 IPR029066 PLP-binding barrel SYN_02160 19c6903f7328e58113d70e8ecd8ff02e 427 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 57 75 - T 11-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site SYN_02160 19c6903f7328e58113d70e8ecd8ff02e 427 Gene3D G3DSA:2.40.37.10 17 408 2.3E-153 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 SYN_02160 19c6903f7328e58113d70e8ecd8ff02e 427 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 412 42.139 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SYN_02160 19c6903f7328e58113d70e8ecd8ff02e 427 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 369 382 1.4E-23 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 SYN_02160 19c6903f7328e58113d70e8ecd8ff02e 427 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 270 289 1.4E-23 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 SYN_02160 19c6903f7328e58113d70e8ecd8ff02e 427 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 1.4E-23 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 SYN_02160 19c6903f7328e58113d70e8ecd8ff02e 427 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 1.4E-23 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 SYN_02160 19c6903f7328e58113d70e8ecd8ff02e 427 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 1.4E-23 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 SYN_02160 19c6903f7328e58113d70e8ecd8ff02e 427 SUPERFAMILY SSF50621 254 414 3.14E-56 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 SYN_00998 8533e453a389da75f7b0587f460f0a33 382 Gene3D G3DSA:3.20.20.70 18 273 1.2E-10 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_00998 8533e453a389da75f7b0587f460f0a33 382 SMART SM00729 17 278 4.0E-27 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SYN_00998 8533e453a389da75f7b0587f460f0a33 382 Pfam PF04055 Radical SAM superfamily 23 230 1.4E-9 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_00998 8533e453a389da75f7b0587f460f0a33 382 SUPERFAMILY SSF102114 106 285 1.1E-27 T 11-10-2018 SYN_00525 88f04597c1bed9038d686584835211b9 354 TIGRFAM TIGR00277 HDIG: HDIG domain 197 260 4.4E-8 T 11-10-2018 IPR006675 HDIG domain SYN_00525 88f04597c1bed9038d686584835211b9 354 SMART SM00471 150 300 1.5E-6 T 11-10-2018 IPR003607 HD/PDEase domain SYN_00525 88f04597c1bed9038d686584835211b9 354 Pfam PF01966 HD domain 196 291 1.7E-13 T 11-10-2018 IPR006674 HD domain SYN_00525 88f04597c1bed9038d686584835211b9 354 SUPERFAMILY SSF109604 151 311 1.03E-22 T 11-10-2018 SYN_00525 88f04597c1bed9038d686584835211b9 354 Gene3D G3DSA:1.10.3210.10 5 316 7.0E-66 T 11-10-2018 SYN_00421 17b7d89d3dabc6eb6687bccf3fbca2e9 280 SMART SM00650 29 204 1.0E-70 T 11-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 SYN_00421 17b7d89d3dabc6eb6687bccf3fbca2e9 280 Gene3D G3DSA:1.10.8.100 211 279 6.7E-21 T 11-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 SYN_00421 17b7d89d3dabc6eb6687bccf3fbca2e9 280 SUPERFAMILY SSF53335 10 277 2.91E-71 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_00421 17b7d89d3dabc6eb6687bccf3fbca2e9 280 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 45 72 - T 11-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 SYN_00421 17b7d89d3dabc6eb6687bccf3fbca2e9 280 Pfam PF00398 Ribosomal RNA adenine dimethylase 17 241 1.8E-52 T 11-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm SYN_00421 17b7d89d3dabc6eb6687bccf3fbca2e9 280 Gene3D G3DSA:3.40.50.150 7 202 3.7E-63 T 11-10-2018 SYN_00421 17b7d89d3dabc6eb6687bccf3fbca2e9 280 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 13 278 54.02 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 SYN_00421 17b7d89d3dabc6eb6687bccf3fbca2e9 280 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 14 276 1.2E-77 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 SYN_00644 6d2934b195fbdbc0c2a93d63686f3e15 173 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 21 115 20.312 T 11-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 SYN_00644 6d2934b195fbdbc0c2a93d63686f3e15 173 SUPERFAMILY SSF54995 21 120 3.79E-30 T 11-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00644 6d2934b195fbdbc0c2a93d63686f3e15 173 Gene3D G3DSA:3.30.70.60 21 125 2.5E-32 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 SYN_00644 6d2934b195fbdbc0c2a93d63686f3e15 173 TIGRFAM TIGR00166 S6: ribosomal protein bS6 22 113 2.5E-24 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00644 6d2934b195fbdbc0c2a93d63686f3e15 173 Pfam PF01250 Ribosomal protein S6 23 111 3.3E-28 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_02116 f4f540c338d800ec8f803f7fe2925462 562 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 30 555 4.7E-233 T 11-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 SYN_02116 f4f540c338d800ec8f803f7fe2925462 562 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 342 533 8.9E-62 T 11-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 SYN_02116 f4f540c338d800ec8f803f7fe2925462 562 SUPERFAMILY SSF50715 342 552 7.85E-73 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 SYN_02116 f4f540c338d800ec8f803f7fe2925462 562 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 36 47 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_02116 f4f540c338d800ec8f803f7fe2925462 562 PRINTS PR00987 Glutamyl-tRNA synthetase signature 33 45 1.4E-7 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 SYN_02116 f4f540c338d800ec8f803f7fe2925462 562 PRINTS PR00987 Glutamyl-tRNA synthetase signature 62 75 1.4E-7 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 SYN_02116 f4f540c338d800ec8f803f7fe2925462 562 PRINTS PR00987 Glutamyl-tRNA synthetase signature 212 222 1.4E-7 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 SYN_02116 f4f540c338d800ec8f803f7fe2925462 562 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 553 51.161 T 11-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 SYN_02116 f4f540c338d800ec8f803f7fe2925462 562 SUPERFAMILY SSF52374 30 347 7.51E-96 T 11-10-2018 SYN_02116 f4f540c338d800ec8f803f7fe2925462 562 Gene3D G3DSA:3.40.50.620 30 250 3.2E-100 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_02116 f4f540c338d800ec8f803f7fe2925462 562 Gene3D G3DSA:3.90.800.10 103 211 3.2E-100 T 11-10-2018 SYN_02116 f4f540c338d800ec8f803f7fe2925462 562 Gene3D G3DSA:2.40.240.10 350 469 1.1E-76 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 SYN_02116 f4f540c338d800ec8f803f7fe2925462 562 Gene3D G3DSA:1.10.1160.10 263 341 4.1E-35 T 11-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 SYN_02116 f4f540c338d800ec8f803f7fe2925462 562 Gene3D G3DSA:2.40.240.10 342 550 1.1E-76 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 SYN_02116 f4f540c338d800ec8f803f7fe2925462 562 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 30 339 7.7E-106 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 SYN_00791 af648dea1dcd1db3310ee30d66c14a48 447 Hamap MF_00195 GTPase Der [der]. 4 442 39.237 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 SYN_00791 af648dea1dcd1db3310ee30d66c14a48 447 SUPERFAMILY SSF52540 176 442 6.37E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00791 af648dea1dcd1db3310ee30d66c14a48 447 Gene3D G3DSA:3.30.300.20 359 442 8.4E-29 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta SYN_00791 af648dea1dcd1db3310ee30d66c14a48 447 Pfam PF01926 50S ribosome-binding GTPase 183 301 3.9E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 SYN_00791 af648dea1dcd1db3310ee30d66c14a48 447 Pfam PF01926 50S ribosome-binding GTPase 7 122 1.2E-26 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 SYN_00791 af648dea1dcd1db3310ee30d66c14a48 447 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 6 439 7.8E-168 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 SYN_00791 af648dea1dcd1db3310ee30d66c14a48 447 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 7 27 1.5E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 SYN_00791 af648dea1dcd1db3310ee30d66c14a48 447 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 75 93 1.5E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 SYN_00791 af648dea1dcd1db3310ee30d66c14a48 447 PIRSF PIRSF006485 3 446 1.8E-165 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 SYN_00791 af648dea1dcd1db3310ee30d66c14a48 447 Gene3D G3DSA:3.40.50.300 176 357 2.4E-51 T 11-10-2018 SYN_00791 af648dea1dcd1db3310ee30d66c14a48 447 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 359 439 4.5E-28 T 11-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like SYN_00791 af648dea1dcd1db3310ee30d66c14a48 447 SUPERFAMILY SSF52540 7 171 3.08E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00791 af648dea1dcd1db3310ee30d66c14a48 447 Gene3D G3DSA:3.40.50.300 3 162 1.6E-44 T 11-10-2018 SYN_00791 af648dea1dcd1db3310ee30d66c14a48 447 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 158 5.7E-22 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 SYN_00791 af648dea1dcd1db3310ee30d66c14a48 447 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 181 349 6.1E-30 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 SYN_00705 9ff89a9ccc88a43b6b0a6c6b3959f2c8 249 Pfam PF00027 Cyclic nucleotide-binding domain 54 139 3.9E-24 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain SYN_00705 9ff89a9ccc88a43b6b0a6c6b3959f2c8 249 SUPERFAMILY SSF51206 27 163 1.57E-36 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like SYN_00705 9ff89a9ccc88a43b6b0a6c6b3959f2c8 249 Pfam PF13545 Crp-like helix-turn-helix domain 174 245 3.3E-16 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SYN_00705 9ff89a9ccc88a43b6b0a6c6b3959f2c8 249 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 103 120 - T 11-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site SYN_00705 9ff89a9ccc88a43b6b0a6c6b3959f2c8 249 SMART SM00419 192 240 3.3E-5 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SYN_00705 9ff89a9ccc88a43b6b0a6c6b3959f2c8 249 SMART SM00100 35 153 5.0E-25 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain SYN_00705 9ff89a9ccc88a43b6b0a6c6b3959f2c8 249 Gene3D G3DSA:1.10.10.10 172 249 6.8E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_00705 9ff89a9ccc88a43b6b0a6c6b3959f2c8 249 SUPERFAMILY SSF46785 171 247 1.01E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_00705 9ff89a9ccc88a43b6b0a6c6b3959f2c8 249 Gene3D G3DSA:2.60.120.10 26 171 6.0E-41 T 11-10-2018 IPR014710 RmlC-like jelly roll fold SYN_02165 17a8afb0b3d87d6c50fae6b53e10ec29 180 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 168 2.5E-48 T 11-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 SYN_02165 17a8afb0b3d87d6c50fae6b53e10ec29 180 Gene3D G3DSA:3.20.20.70 1 176 1.1E-71 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_02165 17a8afb0b3d87d6c50fae6b53e10ec29 180 SUPERFAMILY SSF51569 1 169 2.3E-61 T 11-10-2018 SYN_02165 17a8afb0b3d87d6c50fae6b53e10ec29 180 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 169 3.9E-78 T 11-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SYN_02165 17a8afb0b3d87d6c50fae6b53e10ec29 180 ProSitePatterns PS00958 Transaldolase active site. 80 96 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 SYN_02165 17a8afb0b3d87d6c50fae6b53e10ec29 180 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 SYN_02397 b441abd577c64125c95971839ec902f6 150 SUPERFAMILY SSF46785 11 139 2.87E-33 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_02397 b441abd577c64125c95971839ec902f6 150 Pfam PF01475 Ferric uptake regulator family 17 109 9.8E-28 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 SYN_02397 b441abd577c64125c95971839ec902f6 150 Gene3D G3DSA:1.10.10.10 6 89 4.6E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_02397 b441abd577c64125c95971839ec902f6 150 Gene3D G3DSA:3.30.1490.190 91 146 1.0E-11 T 11-10-2018 SYN_00994 fb19303bb85412cac05d3c940398963e 562 Hamap MF_00123 Arginine--tRNA ligase [argS]. 7 562 26.519 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 SYN_00994 fb19303bb85412cac05d3c940398963e 562 Gene3D G3DSA:3.40.50.620 129 436 1.4E-184 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_00994 fb19303bb85412cac05d3c940398963e 562 Gene3D G3DSA:1.10.730.10 437 562 1.4E-184 T 11-10-2018 SYN_00994 fb19303bb85412cac05d3c940398963e 562 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 139 148 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_00994 fb19303bb85412cac05d3c940398963e 562 SUPERFAMILY SSF52374 125 453 1.18E-95 T 11-10-2018 SYN_00994 fb19303bb85412cac05d3c940398963e 562 SMART SM01016 11 100 1.0E-29 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 SYN_00994 fb19303bb85412cac05d3c940398963e 562 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 40 562 1.0E-147 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 SYN_00994 fb19303bb85412cac05d3c940398963e 562 SUPERFAMILY SSF47323 437 562 7.85E-39 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_00994 fb19303bb85412cac05d3c940398963e 562 Gene3D G3DSA:3.30.1360.70 7 116 2.1E-24 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 SYN_00994 fb19303bb85412cac05d3c940398963e 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 168 181 1.7E-23 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 SYN_00994 fb19303bb85412cac05d3c940398963e 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 144 1.7E-23 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 SYN_00994 fb19303bb85412cac05d3c940398963e 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 144 160 1.7E-23 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 SYN_00994 fb19303bb85412cac05d3c940398963e 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 311 332 1.7E-23 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 SYN_00994 fb19303bb85412cac05d3c940398963e 562 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 15 99 8.4E-20 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 SYN_00994 fb19303bb85412cac05d3c940398963e 562 SMART SM00836 442 562 1.5E-59 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SYN_00994 fb19303bb85412cac05d3c940398963e 562 SUPERFAMILY SSF55190 16 120 2.09E-20 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 SYN_00994 fb19303bb85412cac05d3c940398963e 562 Pfam PF00750 tRNA synthetases class I (R) 117 407 1.0E-24 T 11-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 SYN_00994 fb19303bb85412cac05d3c940398963e 562 Pfam PF05746 DALR anticodon binding domain 442 562 2.4E-36 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SYN_01857 6af45393d95e94c4917ab2071e1329b7 226 SUPERFAMILY SSF103088 124 224 6.93E-19 T 11-10-2018 IPR036737 OmpA-like domain superfamily SYN_01857 6af45393d95e94c4917ab2071e1329b7 226 Pfam PF00691 OmpA family 128 212 1.1E-12 T 11-10-2018 IPR006665 OmpA-like domain SYN_01857 6af45393d95e94c4917ab2071e1329b7 226 Gene3D G3DSA:3.30.1330.60 97 226 4.4E-20 T 11-10-2018 IPR036737 OmpA-like domain superfamily SYN_01857 6af45393d95e94c4917ab2071e1329b7 226 PRINTS PR01021 OMPA domain signature 176 192 9.6E-8 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SYN_01857 6af45393d95e94c4917ab2071e1329b7 226 PRINTS PR01021 OMPA domain signature 129 151 9.6E-8 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SYN_01857 6af45393d95e94c4917ab2071e1329b7 226 PRINTS PR01021 OMPA domain signature 161 176 9.6E-8 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SYN_01723 4f9f7ffce93098e2733e8892f5797307 804 SUPERFAMILY SSF46955 407 479 4.85E-17 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily SYN_01723 4f9f7ffce93098e2733e8892f5797307 804 SUPERFAMILY SSF50249 37 192 3.43E-47 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_01723 4f9f7ffce93098e2733e8892f5797307 804 SMART SM00873 213 386 1.4E-92 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 SYN_01723 4f9f7ffce93098e2733e8892f5797307 804 SUPERFAMILY SSF54991 706 804 3.92E-29 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 SYN_01723 4f9f7ffce93098e2733e8892f5797307 804 Pfam PF03484 tRNA synthetase B5 domain 407 475 1.1E-18 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 SYN_01723 4f9f7ffce93098e2733e8892f5797307 804 Pfam PF03483 B3/4 domain 214 386 1.4E-66 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 SYN_01723 4f9f7ffce93098e2733e8892f5797307 804 Pfam PF01588 Putative tRNA binding domain 45 144 3.5E-19 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 SYN_01723 4f9f7ffce93098e2733e8892f5797307 804 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 798 48.31 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SYN_01723 4f9f7ffce93098e2733e8892f5797307 804 Gene3D G3DSA:3.30.70.380 712 804 3.4E-26 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 SYN_01723 4f9f7ffce93098e2733e8892f5797307 804 SMART SM00896 711 804 2.5E-39 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 SYN_01723 4f9f7ffce93098e2733e8892f5797307 804 Gene3D G3DSA:3.50.40.10 192 400 1.6E-83 T 11-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 SYN_01723 4f9f7ffce93098e2733e8892f5797307 804 Gene3D G3DSA:3.30.56.10 405 480 2.2E-25 T 11-10-2018 SYN_01723 4f9f7ffce93098e2733e8892f5797307 804 Gene3D G3DSA:2.40.50.140 39 153 2.6E-74 T 11-10-2018 SYN_01723 4f9f7ffce93098e2733e8892f5797307 804 Pfam PF03147 Ferredoxin-fold anticodon binding domain 711 804 2.9E-27 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 SYN_01723 4f9f7ffce93098e2733e8892f5797307 804 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 804 6.3E-260 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SYN_01723 4f9f7ffce93098e2733e8892f5797307 804 Gene3D G3DSA:3.30.56.10 4 181 2.6E-74 T 11-10-2018 SYN_01723 4f9f7ffce93098e2733e8892f5797307 804 SUPERFAMILY SSF55681 471 698 9.69E-47 T 11-10-2018 SYN_01723 4f9f7ffce93098e2733e8892f5797307 804 Gene3D G3DSA:3.30.930.10 491 697 5.9E-65 T 11-10-2018 SYN_01723 4f9f7ffce93098e2733e8892f5797307 804 SMART SM00874 404 475 2.2E-25 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 SYN_01723 4f9f7ffce93098e2733e8892f5797307 804 SUPERFAMILY SSF56037 201 395 7.06E-69 T 11-10-2018 SYN_00599 cfb10433b57097bb96551a145f1eaab1 219 SUPERFAMILY SSF52540 4 213 3.75E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00599 cfb10433b57097bb96551a145f1eaab1 219 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 3 212 2.8E-79 T 11-10-2018 IPR004392 Hydrogenase maturation factor HypB GO:0016151|GO:0051604 SYN_00599 cfb10433b57097bb96551a145f1eaab1 219 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 31 192 1.7E-29 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain SYN_00599 cfb10433b57097bb96551a145f1eaab1 219 PIRSF PIRSF005624 1 219 2.4E-85 T 11-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 SYN_00599 cfb10433b57097bb96551a145f1eaab1 219 Gene3D G3DSA:3.40.50.300 11 218 7.8E-61 T 11-10-2018 SYN_02359 0684f87ccddeb2dfb0b5af5cbe5ac76e 652 SUPERFAMILY SSF81606 446 649 7.85E-9 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 SYN_02359 0684f87ccddeb2dfb0b5af5cbe5ac76e 652 Pfam PF00672 HAMP domain 342 391 8.2E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SYN_02359 0684f87ccddeb2dfb0b5af5cbe5ac76e 652 Gene3D G3DSA:3.30.450.20 79 209 1.6E-64 T 11-10-2018 SYN_02359 0684f87ccddeb2dfb0b5af5cbe5ac76e 652 SMART SM00331 432 649 2.6E-49 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 SYN_02359 0684f87ccddeb2dfb0b5af5cbe5ac76e 652 SUPERFAMILY SSF158472 342 394 1.29E-11 T 11-10-2018 SYN_02359 0684f87ccddeb2dfb0b5af5cbe5ac76e 652 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 459 649 7.5E-49 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 SYN_02359 0684f87ccddeb2dfb0b5af5cbe5ac76e 652 SMART SM00304 342 395 1.9E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SYN_02359 0684f87ccddeb2dfb0b5af5cbe5ac76e 652 Pfam PF02743 Cache domain 60 305 3.6E-28 T 11-10-2018 IPR033479 Double Cache domain 1 SYN_02359 0684f87ccddeb2dfb0b5af5cbe5ac76e 652 Gene3D G3DSA:3.30.450.20 71 310 1.6E-64 T 11-10-2018 SYN_02359 0684f87ccddeb2dfb0b5af5cbe5ac76e 652 Gene3D G3DSA:1.20.1480.50 311 400 6.6E-19 T 11-10-2018 SYN_02359 0684f87ccddeb2dfb0b5af5cbe5ac76e 652 Gene3D G3DSA:3.60.40.10 401 649 3.1E-72 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 SYN_01352 d78fc077dcfb0c0f31a6820d8bd921e8 85 Pfam PF01016 Ribosomal L27 protein 2 81 7.7E-37 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01352 d78fc077dcfb0c0f31a6820d8bd921e8 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 69 1.0E-12 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01352 d78fc077dcfb0c0f31a6820d8bd921e8 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.0E-39 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01352 d78fc077dcfb0c0f31a6820d8bd921e8 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.0E-39 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01352 d78fc077dcfb0c0f31a6820d8bd921e8 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.0E-39 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01352 d78fc077dcfb0c0f31a6820d8bd921e8 85 Gene3D G3DSA:2.40.50.100 22 85 8.8E-28 T 11-10-2018 SYN_01352 d78fc077dcfb0c0f31a6820d8bd921e8 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 27.744 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01352 d78fc077dcfb0c0f31a6820d8bd921e8 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 81 5.2E-38 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01352 d78fc077dcfb0c0f31a6820d8bd921e8 85 SUPERFAMILY SSF110324 2 82 3.84E-33 T 11-10-2018 SYN_03311 e1c51b40014dedda38f03096d3507acd 44 PRINTS PR01034 Ribosomal protein S12 signature 31 43 4.0E-14 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_03311 e1c51b40014dedda38f03096d3507acd 44 PRINTS PR01034 Ribosomal protein S12 signature 15 31 4.0E-14 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_03311 e1c51b40014dedda38f03096d3507acd 44 SUPERFAMILY SSF50249 1 43 1.46E-15 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_03311 e1c51b40014dedda38f03096d3507acd 44 Gene3D G3DSA:2.40.50.140 1 44 1.5E-19 T 11-10-2018 SYN_03311 e1c51b40014dedda38f03096d3507acd 44 Pfam PF00164 Ribosomal protein S12/S23 1 43 4.7E-9 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_00416 570b2b5f51880a44b335bc6e4f4a6eef 519 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 52 511 48.67 T 11-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 SYN_00416 570b2b5f51880a44b335bc6e4f4a6eef 519 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 128 142 - T 11-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 SYN_00416 570b2b5f51880a44b335bc6e4f4a6eef 519 SUPERFAMILY SSF51735 279 441 5.05E-81 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_00416 570b2b5f51880a44b335bc6e4f4a6eef 519 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 279 441 3.5E-84 T 11-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 SYN_00416 570b2b5f51880a44b335bc6e4f4a6eef 519 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 57 511 3.1E-189 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 SYN_00416 570b2b5f51880a44b335bc6e4f4a6eef 519 Gene3D G3DSA:3.40.50.1480 59 519 1.5E-238 T 11-10-2018 SYN_00416 570b2b5f51880a44b335bc6e4f4a6eef 519 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 57 518 1.2E-145 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 SYN_00416 570b2b5f51880a44b335bc6e4f4a6eef 519 SMART SM00996 56 518 0.0 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 SYN_00416 570b2b5f51880a44b335bc6e4f4a6eef 519 PIRSF PIRSF001109 45 519 3.1E-189 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 SYN_00416 570b2b5f51880a44b335bc6e4f4a6eef 519 Gene3D G3DSA:3.40.50.720 282 442 1.5E-238 T 11-10-2018 SYN_00416 570b2b5f51880a44b335bc6e4f4a6eef 519 SMART SM00997 279 441 2.6E-113 T 11-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 SYN_00416 570b2b5f51880a44b335bc6e4f4a6eef 519 SUPERFAMILY SSF52283 55 519 2.15E-111 T 11-10-2018 SYN_01125 b6befc64a4f8600386baa79ed820f623 331 Gene3D G3DSA:3.90.25.10 173 306 2.0E-119 T 11-10-2018 SYN_01125 b6befc64a4f8600386baa79ed820f623 331 Gene3D G3DSA:3.40.50.720 3 252 2.0E-119 T 11-10-2018 SYN_01125 b6befc64a4f8600386baa79ed820f623 331 SUPERFAMILY SSF51735 1 324 4.41E-90 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_01125 b6befc64a4f8600386baa79ed820f623 331 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 252 3.2E-56 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 SYN_01125 b6befc64a4f8600386baa79ed820f623 331 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 323 1.7E-139 T 11-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 SYN_03026 ce53b55bb4979d664966f8660da0b3f5 550 Gene3D G3DSA:1.20.120.640 362 549 4.0E-39 T 11-10-2018 SYN_03026 ce53b55bb4979d664966f8660da0b3f5 550 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 59 548 1.0E-171 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 SYN_03026 ce53b55bb4979d664966f8660da0b3f5 550 SUPERFAMILY SSF47323 405 549 3.34E-33 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_03026 ce53b55bb4979d664966f8660da0b3f5 550 SUPERFAMILY SSF52374 59 369 7.93E-103 T 11-10-2018 SYN_03026 ce53b55bb4979d664966f8660da0b3f5 550 SMART SM00840 418 487 1.5E-20 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 SYN_03026 ce53b55bb4979d664966f8660da0b3f5 550 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 59 550 39.128 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 SYN_03026 ce53b55bb4979d664966f8660da0b3f5 550 Pfam PF09190 DALR domain 418 485 1.3E-15 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 SYN_03026 ce53b55bb4979d664966f8660da0b3f5 550 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 72 369 7.2E-133 T 11-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 SYN_03026 ce53b55bb4979d664966f8660da0b3f5 550 Gene3D G3DSA:3.40.50.620 45 361 2.8E-138 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_03026 ce53b55bb4979d664966f8660da0b3f5 550 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 278 299 4.2E-30 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SYN_03026 ce53b55bb4979d664966f8660da0b3f5 550 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 118 127 4.2E-30 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SYN_03026 ce53b55bb4979d664966f8660da0b3f5 550 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 247 265 4.2E-30 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SYN_03026 ce53b55bb4979d664966f8660da0b3f5 550 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 82 93 4.2E-30 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SYN_01028 4a402274b2665e0ff5c314fdef5a5294 310 Gene3D G3DSA:1.10.10.10 249 309 3.1E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_01028 4a402274b2665e0ff5c314fdef5a5294 310 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 37 159 3.2E-8 T 11-10-2018 IPR000014 PAS domain SYN_01028 4a402274b2665e0ff5c314fdef5a5294 310 Gene3D G3DSA:1.20.5.370 145 230 1.6E-5 T 11-10-2018 SYN_01028 4a402274b2665e0ff5c314fdef5a5294 310 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 251 265 1.4E-6 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_01028 4a402274b2665e0ff5c314fdef5a5294 310 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 281 293 1.4E-6 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_01028 4a402274b2665e0ff5c314fdef5a5294 310 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 265 281 1.4E-6 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_01028 4a402274b2665e0ff5c314fdef5a5294 310 SUPERFAMILY SSF46894 239 297 1.9E-12 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SYN_01028 4a402274b2665e0ff5c314fdef5a5294 310 Pfam PF00196 Bacterial regulatory proteins, luxR family 250 298 4.9E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_01028 4a402274b2665e0ff5c314fdef5a5294 310 Pfam PF13426 PAS domain 64 151 6.5E-9 T 11-10-2018 IPR000014 PAS domain SYN_01028 4a402274b2665e0ff5c314fdef5a5294 310 SUPERFAMILY SSF55785 64 160 5.23E-8 T 11-10-2018 IPR035965 PAS domain superfamily SYN_01028 4a402274b2665e0ff5c314fdef5a5294 310 Gene3D G3DSA:3.30.450.20 44 144 3.6E-5 T 11-10-2018 SYN_01028 4a402274b2665e0ff5c314fdef5a5294 310 SMART SM00421 248 305 1.4E-7 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_00056 f5a080cdce757fcf0f3fb83b5239932c 283 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 16 270 5.8E-86 T 11-10-2018 IPR011862 Phosphate binding protein GO:0042301 SYN_00056 f5a080cdce757fcf0f3fb83b5239932c 283 SUPERFAMILY SSF53850 26 272 1.06E-79 T 11-10-2018 SYN_00056 f5a080cdce757fcf0f3fb83b5239932c 283 Gene3D G3DSA:3.40.190.10 29 270 2.7E-89 T 11-10-2018 SYN_00056 f5a080cdce757fcf0f3fb83b5239932c 283 Pfam PF12849 PBP superfamily domain 21 255 2.0E-41 T 11-10-2018 IPR024370 PBP domain SYN_00056 f5a080cdce757fcf0f3fb83b5239932c 283 Gene3D G3DSA:3.40.190.10 105 227 2.7E-89 T 11-10-2018 SYN_03202 0307c0f81aa84c69832b6412b7e17939 203 Gene3D G3DSA:2.40.500.20 94 203 1.4E-45 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SYN_03202 0307c0f81aa84c69832b6412b7e17939 203 PIRSF PIRSF000349 3 203 5.8E-83 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SYN_03202 0307c0f81aa84c69832b6412b7e17939 203 PRINTS PR01703 Manganese superoxide dismutase signature 165 177 2.8E-23 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SYN_03202 0307c0f81aa84c69832b6412b7e17939 203 PRINTS PR01703 Manganese superoxide dismutase signature 33 46 2.8E-23 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SYN_03202 0307c0f81aa84c69832b6412b7e17939 203 PRINTS PR01703 Manganese superoxide dismutase signature 129 137 2.8E-23 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SYN_03202 0307c0f81aa84c69832b6412b7e17939 203 PRINTS PR01703 Manganese superoxide dismutase signature 76 89 2.8E-23 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SYN_03202 0307c0f81aa84c69832b6412b7e17939 203 PRINTS PR01703 Manganese superoxide dismutase signature 12 23 2.8E-23 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SYN_03202 0307c0f81aa84c69832b6412b7e17939 203 Gene3D G3DSA:1.10.287.990 26 92 4.9E-22 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SYN_03202 0307c0f81aa84c69832b6412b7e17939 203 SUPERFAMILY SSF46609 4 94 7.07E-33 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SYN_03202 0307c0f81aa84c69832b6412b7e17939 203 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 167 174 - T 11-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SYN_03202 0307c0f81aa84c69832b6412b7e17939 203 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 11 93 5.1E-30 T 11-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SYN_03202 0307c0f81aa84c69832b6412b7e17939 203 SUPERFAMILY SSF54719 95 202 9.17E-44 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SYN_03202 0307c0f81aa84c69832b6412b7e17939 203 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 100 201 7.3E-40 T 11-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 SYN_01706 a8ca7db25024ba10949b73c0fc1a0908 494 Gene3D G3DSA:2.30.42.10 393 494 5.3E-19 T 11-10-2018 SYN_01706 a8ca7db25024ba10949b73c0fc1a0908 494 SUPERFAMILY SSF50156 276 384 8.41E-23 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 SYN_01706 a8ca7db25024ba10949b73c0fc1a0908 494 SUPERFAMILY SSF50156 402 492 1.25E-17 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 SYN_01706 a8ca7db25024ba10949b73c0fc1a0908 494 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 58 491 8.4E-153 T 11-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 SYN_01706 a8ca7db25024ba10949b73c0fc1a0908 494 SUPERFAMILY SSF50494 53 304 1.46E-69 T 11-10-2018 IPR009003 Peptidase S1, PA clan SYN_01706 a8ca7db25024ba10949b73c0fc1a0908 494 Pfam PF13180 PDZ domain 295 385 7.6E-17 T 11-10-2018 IPR001478 PDZ domain GO:0005515 SYN_01706 a8ca7db25024ba10949b73c0fc1a0908 494 Pfam PF13180 PDZ domain 425 486 1.9E-10 T 11-10-2018 IPR001478 PDZ domain GO:0005515 SYN_01706 a8ca7db25024ba10949b73c0fc1a0908 494 SMART SM00228 295 377 1.8E-13 T 11-10-2018 IPR001478 PDZ domain GO:0005515 SYN_01706 a8ca7db25024ba10949b73c0fc1a0908 494 SMART SM00228 418 485 7.2E-9 T 11-10-2018 IPR001478 PDZ domain GO:0005515 SYN_01706 a8ca7db25024ba10949b73c0fc1a0908 494 Gene3D G3DSA:2.30.42.10 290 392 1.2E-27 T 11-10-2018 SYN_01706 a8ca7db25024ba10949b73c0fc1a0908 494 Pfam PF13365 Trypsin-like peptidase domain 125 259 2.2E-34 T 11-10-2018 SYN_01706 a8ca7db25024ba10949b73c0fc1a0908 494 PRINTS PR00834 HtrA/DegQ protease family signature 335 347 2.2E-56 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SYN_01706 a8ca7db25024ba10949b73c0fc1a0908 494 PRINTS PR00834 HtrA/DegQ protease family signature 155 175 2.2E-56 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SYN_01706 a8ca7db25024ba10949b73c0fc1a0908 494 PRINTS PR00834 HtrA/DegQ protease family signature 196 220 2.2E-56 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SYN_01706 a8ca7db25024ba10949b73c0fc1a0908 494 PRINTS PR00834 HtrA/DegQ protease family signature 134 146 2.2E-56 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SYN_01706 a8ca7db25024ba10949b73c0fc1a0908 494 PRINTS PR00834 HtrA/DegQ protease family signature 252 269 2.2E-56 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SYN_01706 a8ca7db25024ba10949b73c0fc1a0908 494 PRINTS PR00834 HtrA/DegQ protease family signature 230 247 2.2E-56 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SYN_01706 a8ca7db25024ba10949b73c0fc1a0908 494 Gene3D G3DSA:2.40.10.120 57 288 2.8E-84 T 11-10-2018 SYN_02760 eb94a1b75b30259830cd049bf5766ac4 850 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 15 848 1.9E-276 T 11-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SYN_02760 eb94a1b75b30259830cd049bf5766ac4 850 SMART SM00831 13 86 3.3E-24 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 SYN_02760 eb94a1b75b30259830cd049bf5766ac4 850 SUPERFAMILY SSF81653 127 231 1.44E-27 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 SYN_02760 eb94a1b75b30259830cd049bf5766ac4 850 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 94 368 1.1E-36 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SYN_02760 eb94a1b75b30259830cd049bf5766ac4 850 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 566 686 3.8E-27 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SYN_02760 eb94a1b75b30259830cd049bf5766ac4 850 SUPERFAMILY SSF56784 330 696 1.57E-38 T 11-10-2018 IPR036412 HAD-like superfamily SYN_02760 eb94a1b75b30259830cd049bf5766ac4 850 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 334 340 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 SYN_02760 eb94a1b75b30259830cd049bf5766ac4 850 Gene3D G3DSA:1.20.1110.10 64 328 1.2E-85 T 11-10-2018 SYN_02760 eb94a1b75b30259830cd049bf5766ac4 850 Pfam PF00702 haloacid dehalogenase-like hydrolase 328 610 1.0E-11 T 11-10-2018 SYN_02760 eb94a1b75b30259830cd049bf5766ac4 850 Gene3D G3DSA:1.20.1110.10 641 754 5.7E-70 T 11-10-2018 SYN_02760 eb94a1b75b30259830cd049bf5766ac4 850 PRINTS PR01836 Magnesium-transporting ATPase signature 724 740 1.0E-47 T 11-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SYN_02760 eb94a1b75b30259830cd049bf5766ac4 850 PRINTS PR01836 Magnesium-transporting ATPase signature 704 717 1.0E-47 T 11-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SYN_02760 eb94a1b75b30259830cd049bf5766ac4 850 PRINTS PR01836 Magnesium-transporting ATPase signature 262 281 1.0E-47 T 11-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SYN_02760 eb94a1b75b30259830cd049bf5766ac4 850 PRINTS PR01836 Magnesium-transporting ATPase signature 672 683 1.0E-47 T 11-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SYN_02760 eb94a1b75b30259830cd049bf5766ac4 850 PRINTS PR01836 Magnesium-transporting ATPase signature 804 825 1.0E-47 T 11-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SYN_02760 eb94a1b75b30259830cd049bf5766ac4 850 PRINTS PR01836 Magnesium-transporting ATPase signature 245 261 1.0E-47 T 11-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SYN_02760 eb94a1b75b30259830cd049bf5766ac4 850 PRINTS PR01836 Magnesium-transporting ATPase signature 366 379 1.0E-47 T 11-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SYN_02760 eb94a1b75b30259830cd049bf5766ac4 850 PRINTS PR01836 Magnesium-transporting ATPase signature 654 669 1.0E-47 T 11-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SYN_02760 eb94a1b75b30259830cd049bf5766ac4 850 PRINTS PR01836 Magnesium-transporting ATPase signature 755 776 1.0E-47 T 11-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SYN_02760 eb94a1b75b30259830cd049bf5766ac4 850 Pfam PF00690 Cation transporter/ATPase, N-terminus 15 81 1.1E-16 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 SYN_02760 eb94a1b75b30259830cd049bf5766ac4 850 SUPERFAMILY SSF81665 13 847 5.49E-101 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 SYN_02760 eb94a1b75b30259830cd049bf5766ac4 850 Pfam PF00122 E1-E2 ATPase 126 311 5.4E-46 T 11-10-2018 SYN_02760 eb94a1b75b30259830cd049bf5766ac4 850 Gene3D G3DSA:3.40.50.1000 329 341 1.2E-85 T 11-10-2018 IPR023214 HAD superfamily SYN_02760 eb94a1b75b30259830cd049bf5766ac4 850 Gene3D G3DSA:3.40.50.1000 504 640 5.7E-70 T 11-10-2018 IPR023214 HAD superfamily SYN_02760 eb94a1b75b30259830cd049bf5766ac4 850 Pfam PF00689 Cation transporting ATPase, C-terminus 679 840 1.1E-15 T 11-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 SYN_02760 eb94a1b75b30259830cd049bf5766ac4 850 Gene3D G3DSA:2.70.150.10 28 235 1.2E-85 T 11-10-2018 SYN_02760 eb94a1b75b30259830cd049bf5766ac4 850 Gene3D G3DSA:3.40.1110.10 386 503 5.7E-70 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 SYN_00989 daa61d09aff4b766c049bebc54d9b702 93 Pfam PF00203 Ribosomal protein S19 3 83 2.3E-36 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00989 daa61d09aff4b766c049bebc54d9b702 93 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 6.5E-24 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00989 daa61d09aff4b766c049bebc54d9b702 93 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 6.5E-24 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00989 daa61d09aff4b766c049bebc54d9b702 93 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 6.5E-24 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00989 daa61d09aff4b766c049bebc54d9b702 93 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.133 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00989 daa61d09aff4b766c049bebc54d9b702 93 SUPERFAMILY SSF54570 3 84 1.7E-34 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00989 daa61d09aff4b766c049bebc54d9b702 93 PIRSF PIRSF002144 1 93 8.3E-32 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00989 daa61d09aff4b766c049bebc54d9b702 93 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 11-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00989 daa61d09aff4b766c049bebc54d9b702 93 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 2 89 1.1E-43 T 11-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 SYN_00989 daa61d09aff4b766c049bebc54d9b702 93 Gene3D G3DSA:3.30.860.10 1 92 9.2E-39 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_01633 f144ded97ed9e8bb32e5bbf59a791837 513 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 214 227 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SYN_01633 f144ded97ed9e8bb32e5bbf59a791837 513 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 276 291 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SYN_01633 f144ded97ed9e8bb32e5bbf59a791837 513 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 403 412 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site SYN_01633 f144ded97ed9e8bb32e5bbf59a791837 513 Pfam PF01590 GAF domain 25 163 8.0E-15 T 11-10-2018 IPR003018 GAF domain GO:0005515 SYN_01633 f144ded97ed9e8bb32e5bbf59a791837 513 Pfam PF02954 Bacterial regulatory protein, Fis family 455 494 5.6E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_01633 f144ded97ed9e8bb32e5bbf59a791837 513 SUPERFAMILY SSF46689 403 497 4.93E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SYN_01633 f144ded97ed9e8bb32e5bbf59a791837 513 Gene3D G3DSA:1.10.10.60 430 501 7.0E-15 T 11-10-2018 SYN_01633 f144ded97ed9e8bb32e5bbf59a791837 513 Pfam PF00158 Sigma-54 interaction domain 190 356 2.4E-70 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SYN_01633 f144ded97ed9e8bb32e5bbf59a791837 513 Gene3D G3DSA:3.30.450.40 2 176 1.7E-45 T 11-10-2018 IPR029016 GAF-like domain superfamily SYN_01633 f144ded97ed9e8bb32e5bbf59a791837 513 SUPERFAMILY SSF52540 189 433 2.99E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01633 f144ded97ed9e8bb32e5bbf59a791837 513 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 477 497 1.6E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_01633 f144ded97ed9e8bb32e5bbf59a791837 513 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 460 477 1.6E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_01633 f144ded97ed9e8bb32e5bbf59a791837 513 Gene3D G3DSA:1.10.8.60 361 428 1.6E-25 T 11-10-2018 SYN_01633 f144ded97ed9e8bb32e5bbf59a791837 513 Gene3D G3DSA:3.40.50.300 178 360 1.7E-65 T 11-10-2018 SYN_01633 f144ded97ed9e8bb32e5bbf59a791837 513 SUPERFAMILY SSF55781 6 178 5.69E-23 T 11-10-2018 SYN_01633 f144ded97ed9e8bb32e5bbf59a791837 513 SMART SM00382 210 354 6.6E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01633 f144ded97ed9e8bb32e5bbf59a791837 513 SMART SM00065 24 174 1.8E-22 T 11-10-2018 IPR003018 GAF domain GO:0005515 SYN_00151 2de5f5318679f3d8b92958d02e5398c0 240 Gene3D G3DSA:3.30.70.20 122 182 6.5E-9 T 11-10-2018 SYN_00151 2de5f5318679f3d8b92958d02e5398c0 240 Gene3D G3DSA:3.10.20.740 1 117 2.1E-30 T 11-10-2018 SYN_00151 2de5f5318679f3d8b92958d02e5398c0 240 SUPERFAMILY SSF54292 1 115 2.27E-28 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 SYN_00151 2de5f5318679f3d8b92958d02e5398c0 240 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 126 137 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_00151 2de5f5318679f3d8b92958d02e5398c0 240 Pfam PF14697 4Fe-4S dicluster domain 122 184 6.4E-9 T 11-10-2018 SYN_00151 2de5f5318679f3d8b92958d02e5398c0 240 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 167 178 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_00151 2de5f5318679f3d8b92958d02e5398c0 240 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 1 78 4.8E-18 T 11-10-2018 SYN_00151 2de5f5318679f3d8b92958d02e5398c0 240 SUPERFAMILY SSF54862 90 184 9.42E-14 T 11-10-2018 SYN_01223 ff8be8ef221e634a77af4df69cd303ae 647 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 23 79 2.8E-24 T 11-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 SYN_01223 ff8be8ef221e634a77af4df69cd303ae 647 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 638 0.0 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 SYN_01223 ff8be8ef221e634a77af4df69cd303ae 647 Pfam PF00501 AMP-binding enzyme 85 518 3.1E-91 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 SYN_01223 ff8be8ef221e634a77af4df69cd303ae 647 Gene3D G3DSA:3.30.300.30 514 645 4.5E-30 T 11-10-2018 SYN_01223 ff8be8ef221e634a77af4df69cd303ae 647 SUPERFAMILY SSF56801 11 638 2.88E-182 T 11-10-2018 SYN_01223 ff8be8ef221e634a77af4df69cd303ae 647 Gene3D G3DSA:3.40.50.12780 56 511 3.1E-104 T 11-10-2018 SYN_01223 ff8be8ef221e634a77af4df69cd303ae 647 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 1 641 53.447 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 SYN_01223 ff8be8ef221e634a77af4df69cd303ae 647 ProSitePatterns PS00455 Putative AMP-binding domain signature. 257 268 - T 11-10-2018 IPR020845 AMP-binding, conserved site SYN_01223 ff8be8ef221e634a77af4df69cd303ae 647 Pfam PF13193 AMP-binding enzyme C-terminal domain 527 605 1.2E-25 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain SYN_01088 e2c28b6869e2b32ff0cdbebadab63579 140 Gene3D G3DSA:3.10.129.10 2 139 6.1E-23 T 11-10-2018 SYN_01088 e2c28b6869e2b32ff0cdbebadab63579 140 SUPERFAMILY SSF54637 7 118 2.18E-22 T 11-10-2018 IPR029069 HotDog domain superfamily SYN_01088 e2c28b6869e2b32ff0cdbebadab63579 140 Pfam PF03061 Thioesterase superfamily 20 95 1.9E-4 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 SYN_01016 e7bd01a25b3625e419e8d2661cc1b415 457 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 457 33.374 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 SYN_01016 e7bd01a25b3625e419e8d2661cc1b415 457 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 10 457 3.1E-115 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 SYN_01016 e7bd01a25b3625e419e8d2661cc1b415 457 Gene3D G3DSA:3.30.1360.120 1 124 1.4E-45 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 SYN_01016 e7bd01a25b3625e419e8d2661cc1b415 457 Pfam PF01926 50S ribosome-binding GTPase 222 334 4.4E-21 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 SYN_01016 e7bd01a25b3625e419e8d2661cc1b415 457 Pfam PF12631 MnmE helical domain 127 454 1.2E-54 T 11-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 SYN_01016 e7bd01a25b3625e419e8d2661cc1b415 457 Gene3D G3DSA:1.20.120.430 125 457 6.7E-108 T 11-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 SYN_01016 e7bd01a25b3625e419e8d2661cc1b415 457 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 221 344 1.6E-23 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 SYN_01016 e7bd01a25b3625e419e8d2661cc1b415 457 SUPERFAMILY SSF52540 77 374 1.7E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01016 e7bd01a25b3625e419e8d2661cc1b415 457 Gene3D G3DSA:3.40.50.300 220 385 6.7E-108 T 11-10-2018 SYN_01016 e7bd01a25b3625e419e8d2661cc1b415 457 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 124 7.5E-40 T 11-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 SYN_01016 e7bd01a25b3625e419e8d2661cc1b415 457 SUPERFAMILY SSF116878 125 457 1.7E-45 T 11-10-2018 SYN_00970 462cb8db40edb3a4738c42d20dccd833 277 SUPERFAMILY SSF53335 77 276 1.54E-54 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_00970 462cb8db40edb3a4738c42d20dccd833 277 Gene3D G3DSA:1.10.155.10 1 75 6.1E-23 T 11-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily SYN_00970 462cb8db40edb3a4738c42d20dccd833 277 SUPERFAMILY SSF47757 2 75 5.75E-18 T 11-10-2018 SYN_00970 462cb8db40edb3a4738c42d20dccd833 277 PIRSF PIRSF000410 1 277 3.4E-108 T 11-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR SYN_00970 462cb8db40edb3a4738c42d20dccd833 277 Pfam PF01739 CheR methyltransferase, SAM binding domain 77 272 3.7E-59 T 11-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal SYN_00970 462cb8db40edb3a4738c42d20dccd833 277 Pfam PF03705 CheR methyltransferase, all-alpha domain 11 61 1.7E-16 T 11-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal SYN_00970 462cb8db40edb3a4738c42d20dccd833 277 PRINTS PR00996 Glutamate methyltransferase family signature 70 82 3.2E-44 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SYN_00970 462cb8db40edb3a4738c42d20dccd833 277 PRINTS PR00996 Glutamate methyltransferase family signature 237 260 3.2E-44 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SYN_00970 462cb8db40edb3a4738c42d20dccd833 277 PRINTS PR00996 Glutamate methyltransferase family signature 113 133 3.2E-44 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SYN_00970 462cb8db40edb3a4738c42d20dccd833 277 PRINTS PR00996 Glutamate methyltransferase family signature 218 232 3.2E-44 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SYN_00970 462cb8db40edb3a4738c42d20dccd833 277 PRINTS PR00996 Glutamate methyltransferase family signature 147 163 3.2E-44 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SYN_00970 462cb8db40edb3a4738c42d20dccd833 277 PRINTS PR00996 Glutamate methyltransferase family signature 31 44 3.2E-44 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SYN_00970 462cb8db40edb3a4738c42d20dccd833 277 SMART SM00138 9 277 2.1E-95 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 SYN_00970 462cb8db40edb3a4738c42d20dccd833 277 Gene3D G3DSA:3.40.50.150 76 277 2.2E-68 T 11-10-2018 SYN_02256 7708d49fabe7d41d73206d5637733b32 461 Pfam PF00793 DAHP synthetase I family 150 446 9.0E-99 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 SYN_02256 7708d49fabe7d41d73206d5637733b32 461 Gene3D G3DSA:3.20.20.70 108 456 4.6E-154 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_02256 7708d49fabe7d41d73206d5637733b32 461 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 113 453 1.9E-151 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 SYN_02256 7708d49fabe7d41d73206d5637733b32 461 SUPERFAMILY SSF51569 113 453 1.57E-130 T 11-10-2018 SYN_01172 c24ba0979f4b1fe12bfefe4c76cef67c 421 SUPERFAMILY SSF160240 231 309 1.44E-13 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 SYN_01172 c24ba0979f4b1fe12bfefe4c76cef67c 421 Gene3D G3DSA:1.20.1510.10 26 226 2.4E-32 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily SYN_01172 c24ba0979f4b1fe12bfefe4c76cef67c 421 SUPERFAMILY SSF161111 27 228 6.02E-30 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily SYN_01172 c24ba0979f4b1fe12bfefe4c76cef67c 421 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 325 418 3.2E-8 T 11-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis SYN_01172 c24ba0979f4b1fe12bfefe4c76cef67c 421 Gene3D G3DSA:3.30.70.1350 227 313 1.3E-12 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 SYN_01172 c24ba0979f4b1fe12bfefe4c76cef67c 421 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 29 309 7.8E-43 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SYN_01172 c24ba0979f4b1fe12bfefe4c76cef67c 421 Pfam PF16916 Dimerisation domain of Zinc Transporter 232 307 6.5E-15 T 11-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain SYN_01172 c24ba0979f4b1fe12bfefe4c76cef67c 421 Pfam PF01545 Cation efflux family 33 227 1.2E-30 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SYN_01172 c24ba0979f4b1fe12bfefe4c76cef67c 421 Gene3D G3DSA:3.30.420.130 314 420 9.2E-14 T 11-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily SYN_01172 c24ba0979f4b1fe12bfefe4c76cef67c 421 SUPERFAMILY SSF53146 314 418 1.83E-11 T 11-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily SYN_02139 b24b87447f1cec7dd2be38c249df6d4b 638 SUPERFAMILY SSF142984 445 528 2.75E-20 T 11-10-2018 SYN_02139 b24b87447f1cec7dd2be38c249df6d4b 638 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 536 617 2.0E-23 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02139 b24b87447f1cec7dd2be38c249df6d4b 638 SUPERFAMILY SSF142019 210 444 3.27E-87 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02139 b24b87447f1cec7dd2be38c249df6d4b 638 Gene3D G3DSA:3.40.30.10 103 194 2.2E-26 T 11-10-2018 SYN_02139 b24b87447f1cec7dd2be38c249df6d4b 638 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 253 423 2.2E-50 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02139 b24b87447f1cec7dd2be38c249df6d4b 638 SMART SM00928 533 578 7.5E-20 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02139 b24b87447f1cec7dd2be38c249df6d4b 638 Gene3D G3DSA:1.20.1440.230 532 629 3.5E-24 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02139 b24b87447f1cec7dd2be38c249df6d4b 638 Gene3D G3DSA:3.10.20.600 436 530 7.6E-26 T 11-10-2018 SYN_02139 b24b87447f1cec7dd2be38c249df6d4b 638 SUPERFAMILY SSF52833 35 187 6.26E-42 T 11-10-2018 IPR036249 Thioredoxin-like superfamily SYN_02139 b24b87447f1cec7dd2be38c249df6d4b 638 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 546 557 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02139 b24b87447f1cec7dd2be38c249df6d4b 638 Gene3D G3DSA:1.10.10.1590 32 100 4.5E-6 T 11-10-2018 SYN_02139 b24b87447f1cec7dd2be38c249df6d4b 638 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 37 182 1.6E-41 T 11-10-2018 SYN_02139 b24b87447f1cec7dd2be38c249df6d4b 638 Gene3D G3DSA:3.40.50.11540 258 435 9.1E-78 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02139 b24b87447f1cec7dd2be38c249df6d4b 638 SUPERFAMILY SSF140490 529 626 2.09E-29 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_01522 18d6a2cc91f2f4ddd5056d8e881988a3 235 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 162 220 1.6E-13 T 11-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 SYN_01522 18d6a2cc91f2f4ddd5056d8e881988a3 235 SMART SM00983 162 221 1.0E-16 T 11-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 SYN_01522 18d6a2cc91f2f4ddd5056d8e881988a3 235 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 43 135 1.2E-22 T 11-10-2018 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 SYN_01522 18d6a2cc91f2f4ddd5056d8e881988a3 235 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 18 223 5.6E-51 T 11-10-2018 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 SYN_01522 18d6a2cc91f2f4ddd5056d8e881988a3 235 SUPERFAMILY SSF63862 162 224 7.19E-11 T 11-10-2018 IPR036371 Thiamin pyrophosphokinase, thiamin-binding domain superfamily GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 SYN_01522 18d6a2cc91f2f4ddd5056d8e881988a3 235 Gene3D G3DSA:3.40.50.10240 15 230 9.0E-62 T 11-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 SYN_01522 18d6a2cc91f2f4ddd5056d8e881988a3 235 SUPERFAMILY SSF63999 15 144 1.83E-31 T 11-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 SYN_02584 a036eafc367b86f3b616b25aaa577640 619 Gene3D G3DSA:3.40.50.300 1 200 8.4E-79 T 11-10-2018 SYN_02584 a036eafc367b86f3b616b25aaa577640 619 SUPERFAMILY SSF52540 6 190 2.93E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02584 a036eafc367b86f3b616b25aaa577640 619 SMART SM00341 529 609 9.0E-21 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 SYN_02584 a036eafc367b86f3b616b25aaa577640 619 Gene3D G3DSA:3.40.50.300 201 332 3.2E-41 T 11-10-2018 SYN_02584 a036eafc367b86f3b616b25aaa577640 619 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 8 600 2.6E-240 T 11-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 SYN_02584 a036eafc367b86f3b616b25aaa577640 619 SUPERFAMILY SSF52540 200 450 9.35E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02584 a036eafc367b86f3b616b25aaa577640 619 Gene3D G3DSA:1.10.10.10 334 514 4.3E-55 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_02584 a036eafc367b86f3b616b25aaa577640 619 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 9 455 8.2E-170 T 11-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 SYN_02584 a036eafc367b86f3b616b25aaa577640 619 Pfam PF00270 DEAD/DEAH box helicase 21 177 3.9E-18 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SYN_02584 a036eafc367b86f3b616b25aaa577640 619 SUPERFAMILY SSF47819 533 604 3.92E-23 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 SYN_02584 a036eafc367b86f3b616b25aaa577640 619 Pfam PF09382 RQC domain 398 508 2.7E-40 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 SYN_02584 a036eafc367b86f3b616b25aaa577640 619 Pfam PF00570 HRDC domain 533 599 2.6E-21 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 SYN_02584 a036eafc367b86f3b616b25aaa577640 619 Gene3D G3DSA:1.10.150.80 526 608 1.9E-22 T 11-10-2018 SYN_02584 a036eafc367b86f3b616b25aaa577640 619 Pfam PF16124 RecQ zinc-binding 335 396 1.8E-18 T 11-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain SYN_02584 a036eafc367b86f3b616b25aaa577640 619 Pfam PF00271 Helicase conserved C-terminal domain 220 322 3.2E-18 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_02584 a036eafc367b86f3b616b25aaa577640 619 SMART SM00487 14 210 5.1E-30 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain SYN_02584 a036eafc367b86f3b616b25aaa577640 619 SMART SM00490 242 323 7.7E-29 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_02584 a036eafc367b86f3b616b25aaa577640 619 SMART SM00956 403 506 5.2E-56 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 SYN_00797 630cbe48ed46058700d0443f74fdd611 451 SMART SM00729 157 375 6.7E-55 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SYN_00797 630cbe48ed46058700d0443f74fdd611 451 Pfam PF04055 Radical SAM superfamily 163 333 1.2E-21 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_00797 630cbe48ed46058700d0443f74fdd611 451 Pfam PF00919 Uncharacterized protein family UPF0004 18 107 7.7E-23 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 SYN_00797 630cbe48ed46058700d0443f74fdd611 451 Gene3D G3DSA:3.40.50.12160 17 142 3.8E-20 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily SYN_00797 630cbe48ed46058700d0443f74fdd611 451 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 21 436 5.8E-137 T 11-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 SYN_00797 630cbe48ed46058700d0443f74fdd611 451 SUPERFAMILY SSF102114 147 377 1.44E-55 T 11-10-2018 SYN_00797 630cbe48ed46058700d0443f74fdd611 451 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 18 445 6.6E-124 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 SYN_00797 630cbe48ed46058700d0443f74fdd611 451 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 161 181 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 SYN_00797 630cbe48ed46058700d0443f74fdd611 451 Gene3D G3DSA:3.80.30.20 154 388 7.3E-79 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe SYN_01058 c390851c14e1509ef7d0ad65e2e4f591 720 Gene3D G3DSA:2.170.130.10 102 223 1.0E-9 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily SYN_01058 c390851c14e1509ef7d0ad65e2e4f591 720 Gene3D G3DSA:2.40.170.20 241 720 2.3E-24 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily SYN_01058 c390851c14e1509ef7d0ad65e2e4f591 720 SUPERFAMILY SSF56935 103 718 2.78E-50 T 11-10-2018 SYN_01058 c390851c14e1509ef7d0ad65e2e4f591 720 Pfam PF07715 TonB-dependent Receptor Plug Domain 107 196 6.4E-9 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain SYN_01337 ce22f1f317a600e8cbc3ba2db0458559 150 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 32 140 1.2E-42 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 SYN_01337 ce22f1f317a600e8cbc3ba2db0458559 150 SUPERFAMILY SSF57716 110 146 3.39E-10 T 11-10-2018 SYN_01337 ce22f1f317a600e8cbc3ba2db0458559 150 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 113 137 - T 11-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site SYN_01337 ce22f1f317a600e8cbc3ba2db0458559 150 SUPERFAMILY SSF109635 28 109 2.48E-23 T 11-10-2018 IPR037187 DksA, N-terminal domain superfamily SYN_01337 ce22f1f317a600e8cbc3ba2db0458559 150 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 108 143 2.9E-13 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 SYN_01337 ce22f1f317a600e8cbc3ba2db0458559 150 Gene3D G3DSA:1.20.120.910 20 148 1.2E-36 T 11-10-2018 SYN_01337 ce22f1f317a600e8cbc3ba2db0458559 150 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 29 149 24.615 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 SYN_01752 c730b8615c480406b4459ae831f71d2c 78 Pfam PF00857 Isochorismatase family 2 68 1.1E-19 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 SYN_01752 c730b8615c480406b4459ae831f71d2c 78 SUPERFAMILY SSF52499 1 74 2.09E-24 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 SYN_01752 c730b8615c480406b4459ae831f71d2c 78 Gene3D G3DSA:3.40.50.850 1 74 4.0E-25 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 SYN_00869 1c760def00ed11b62549bd40cfefef96 438 SUPERFAMILY SSF82544 4 433 1.31E-123 T 11-10-2018 SYN_00869 1c760def00ed11b62549bd40cfefef96 438 Pfam PF13660 Domain of unknown function (DUF4147) 8 242 5.5E-66 T 11-10-2018 IPR025286 MOFRL-associated domain Reactome: R-HSA-70350 SYN_00869 1c760def00ed11b62549bd40cfefef96 438 Gene3D G3DSA:3.40.1480.10 267 430 9.6E-143 T 11-10-2018 IPR037035 Glycerate kinase-like, C-terminal domain superfamily SYN_00869 1c760def00ed11b62549bd40cfefef96 438 Pfam PF05161 MOFRL family 322 427 6.3E-39 T 11-10-2018 IPR007835 MOFRL domain Reactome: R-HSA-70350 SYN_00869 1c760def00ed11b62549bd40cfefef96 438 Gene3D G3DSA:3.40.50.10180 24 266 9.6E-143 T 11-10-2018 IPR038614 Glycerate kinase, N-terminal domain superfamily Reactome: R-HSA-70350 SYN_01405 2d0cfe550fabf94885377751d3ba114b 880 Gene3D G3DSA:1.10.1420.10 412 547 6.2E-102 T 11-10-2018 SYN_01405 2d0cfe550fabf94885377751d3ba114b 880 Gene3D G3DSA:1.10.1420.10 277 572 6.2E-102 T 11-10-2018 SYN_01405 2d0cfe550fabf94885377751d3ba114b 880 SMART SM00534 621 810 1.3E-113 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SYN_01405 2d0cfe550fabf94885377751d3ba114b 880 SMART SM00533 295 603 5.7E-96 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SYN_01405 2d0cfe550fabf94885377751d3ba114b 880 Gene3D G3DSA:3.30.420.110 132 272 6.6E-33 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 SYN_01405 2d0cfe550fabf94885377751d3ba114b 880 Pfam PF00488 MutS domain V 624 813 7.6E-82 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SYN_01405 2d0cfe550fabf94885377751d3ba114b 880 Pfam PF05192 MutS domain III 281 571 2.6E-41 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SYN_01405 2d0cfe550fabf94885377751d3ba114b 880 Gene3D G3DSA:3.40.1170.10 4 125 2.3E-47 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 SYN_01405 2d0cfe550fabf94885377751d3ba114b 880 SUPERFAMILY SSF48334 278 578 1.57E-84 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily SYN_01405 2d0cfe550fabf94885377751d3ba114b 880 SUPERFAMILY SSF55271 9 118 1.19E-41 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 SYN_01405 2d0cfe550fabf94885377751d3ba114b 880 Pfam PF01624 MutS domain I 13 123 5.0E-42 T 11-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 SYN_01405 2d0cfe550fabf94885377751d3ba114b 880 Pfam PF05188 MutS domain II 133 263 1.1E-24 T 11-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 SYN_01405 2d0cfe550fabf94885377751d3ba114b 880 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 702 718 - T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SYN_01405 2d0cfe550fabf94885377751d3ba114b 880 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 12 869 24.965 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 SYN_01405 2d0cfe550fabf94885377751d3ba114b 880 Pfam PF05190 MutS family domain IV 440 531 8.1E-25 T 11-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 SYN_01405 2d0cfe550fabf94885377751d3ba114b 880 Gene3D G3DSA:3.40.50.300 583 878 3.7E-101 T 11-10-2018 SYN_01405 2d0cfe550fabf94885377751d3ba114b 880 SUPERFAMILY SSF53150 123 291 8.11E-36 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 SYN_01405 2d0cfe550fabf94885377751d3ba114b 880 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 12 874 0.0 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 SYN_01405 2d0cfe550fabf94885377751d3ba114b 880 SUPERFAMILY SSF52540 579 814 7.38E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01405 2d0cfe550fabf94885377751d3ba114b 880 PIRSF PIRSF037677 5 850 9.8E-170 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 SYN_01592 5f1031aaf720cb7873e711c8569e55f2 164 Gene3D G3DSA:3.30.230.10 74 164 7.2E-37 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SYN_01592 5f1031aaf720cb7873e711c8569e55f2 164 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 2.8E-31 T 11-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 SYN_01592 5f1031aaf720cb7873e711c8569e55f2 164 Pfam PF00333 Ribosomal protein S5, N-terminal domain 13 75 3.2E-28 T 11-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 SYN_01592 5f1031aaf720cb7873e711c8569e55f2 164 Gene3D G3DSA:3.30.160.20 1 72 3.9E-29 T 11-10-2018 SYN_01592 5f1031aaf720cb7873e711c8569e55f2 164 SUPERFAMILY SSF54768 10 75 4.29E-22 T 11-10-2018 SYN_01592 5f1031aaf720cb7873e711c8569e55f2 164 SUPERFAMILY SSF54211 79 159 3.54E-27 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SYN_01592 5f1031aaf720cb7873e711c8569e55f2 164 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 34.523 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 SYN_01592 5f1031aaf720cb7873e711c8569e55f2 164 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 5.6E-66 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 SYN_01592 5f1031aaf720cb7873e711c8569e55f2 164 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 11-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site SYN_00478 a4598d46680efa25530c44f30d82c511 268 Pfam PF00795 Carbon-nitrogen hydrolase 3 241 1.6E-45 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 SYN_00478 a4598d46680efa25530c44f30d82c511 268 SUPERFAMILY SSF56317 1 261 2.62E-63 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily SYN_00478 a4598d46680efa25530c44f30d82c511 268 Gene3D G3DSA:3.60.110.10 1 262 3.2E-82 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily SYN_02708 73de79cf44e584f35bbbfaf3c7dc21e6 471 Gene3D G3DSA:3.40.50.150 168 470 7.3E-83 T 11-10-2018 SYN_02708 73de79cf44e584f35bbbfaf3c7dc21e6 471 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 25 470 6.0E-103 T 11-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 SYN_02708 73de79cf44e584f35bbbfaf3c7dc21e6 471 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 349 360 - T 11-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 SYN_02708 73de79cf44e584f35bbbfaf3c7dc21e6 471 Pfam PF01189 16S rRNA methyltransferase RsmB/F 272 468 1.9E-55 T 11-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 SYN_02708 73de79cf44e584f35bbbfaf3c7dc21e6 471 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 350 362 7.0E-25 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase SYN_02708 73de79cf44e584f35bbbfaf3c7dc21e6 471 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 453 470 7.0E-25 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase SYN_02708 73de79cf44e584f35bbbfaf3c7dc21e6 471 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 400 416 7.0E-25 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase SYN_02708 73de79cf44e584f35bbbfaf3c7dc21e6 471 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 252 266 7.0E-25 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase SYN_02708 73de79cf44e584f35bbbfaf3c7dc21e6 471 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 281 291 7.0E-25 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase SYN_02708 73de79cf44e584f35bbbfaf3c7dc21e6 471 Pfam PF01029 NusB family 24 147 3.5E-26 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SYN_02708 73de79cf44e584f35bbbfaf3c7dc21e6 471 SUPERFAMILY SSF48013 23 177 2.94E-29 T 11-10-2018 IPR035926 NusB-like superfamily SYN_02708 73de79cf44e584f35bbbfaf3c7dc21e6 471 Gene3D G3DSA:1.10.940.10 19 162 1.4E-34 T 11-10-2018 IPR035926 NusB-like superfamily SYN_02708 73de79cf44e584f35bbbfaf3c7dc21e6 471 SUPERFAMILY SSF53335 164 470 3.16E-75 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_01037 56630f9a72eed7568dd1772b72b34122 753 Pfam PF14490 Helix-hairpin-helix containing domain 166 255 3.1E-32 T 11-10-2018 IPR029493 RecD helicase-like helix-hairpin-helix domain SYN_01037 56630f9a72eed7568dd1772b72b34122 753 Pfam PF13604 AAA domain 352 531 9.5E-45 T 11-10-2018 SYN_01037 56630f9a72eed7568dd1772b72b34122 753 SUPERFAMILY SSF47781 106 184 6.18E-11 T 11-10-2018 IPR010994 RuvA domain 2-like SYN_01037 56630f9a72eed7568dd1772b72b34122 753 Gene3D G3DSA:1.10.150.20 103 170 5.4E-12 T 11-10-2018 SYN_01037 56630f9a72eed7568dd1772b72b34122 753 SMART SM00382 366 488 8.4E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01037 56630f9a72eed7568dd1772b72b34122 753 Gene3D G3DSA:1.10.10.2220 209 306 3.6E-15 T 11-10-2018 SYN_01037 56630f9a72eed7568dd1772b72b34122 753 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 27 749 28.638 T 11-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 SYN_01037 56630f9a72eed7568dd1772b72b34122 753 Gene3D G3DSA:3.40.50.300 337 741 2.0E-151 T 11-10-2018 SYN_01037 56630f9a72eed7568dd1772b72b34122 753 Gene3D G3DSA:3.40.50.300 511 735 2.0E-151 T 11-10-2018 SYN_01037 56630f9a72eed7568dd1772b72b34122 753 Gene3D G3DSA:2.30.30.940 603 673 2.0E-151 T 11-10-2018 SYN_01037 56630f9a72eed7568dd1772b72b34122 753 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 30 746 2.7E-220 T 11-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 SYN_01037 56630f9a72eed7568dd1772b72b34122 753 Pfam PF13538 UvrD-like helicase C-terminal domain 673 720 1.2E-16 T 11-10-2018 IPR027785 UvrD-like helicase C-terminal domain SYN_01037 56630f9a72eed7568dd1772b72b34122 753 SUPERFAMILY SSF52540 346 725 3.47E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01037 56630f9a72eed7568dd1772b72b34122 753 Pfam PF14520 Helix-hairpin-helix domain 116 165 1.9E-7 T 11-10-2018 SYN_01226 b2b6ca1461b2f5e4a950e502c3f1677f 771 Gene3D G3DSA:3.20.70.20 29 606 1.9E-235 T 11-10-2018 SYN_01226 b2b6ca1461b2f5e4a950e502c3f1677f 771 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 40 121 5.2E-26 T 11-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SYN_01226 b2b6ca1461b2f5e4a950e502c3f1677f 771 SUPERFAMILY SSF48168 44 122 1.54E-12 T 11-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SYN_01226 b2b6ca1461b2f5e4a950e502c3f1677f 771 SUPERFAMILY SSF51998 123 602 5.49E-154 T 11-10-2018 SYN_01226 b2b6ca1461b2f5e4a950e502c3f1677f 771 Pfam PF02867 Ribonucleotide reductase, barrel domain 124 590 1.7E-155 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SYN_01226 b2b6ca1461b2f5e4a950e502c3f1677f 771 PRINTS PR01183 Ribonucleotide reductase large chain signature 199 218 2.7E-28 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SYN_01226 b2b6ca1461b2f5e4a950e502c3f1677f 771 PRINTS PR01183 Ribonucleotide reductase large chain signature 374 396 2.7E-28 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SYN_01226 b2b6ca1461b2f5e4a950e502c3f1677f 771 PRINTS PR01183 Ribonucleotide reductase large chain signature 443 470 2.7E-28 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SYN_01226 b2b6ca1461b2f5e4a950e502c3f1677f 771 PRINTS PR01183 Ribonucleotide reductase large chain signature 336 359 2.7E-28 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SYN_01226 b2b6ca1461b2f5e4a950e502c3f1677f 771 PRINTS PR01183 Ribonucleotide reductase large chain signature 402 425 2.7E-28 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SYN_01226 b2b6ca1461b2f5e4a950e502c3f1677f 771 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 46 600 8.3E-220 T 11-10-2018 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SYN_01226 b2b6ca1461b2f5e4a950e502c3f1677f 771 Pfam PF12637 TSCPD domain 634 724 4.8E-14 T 11-10-2018 IPR024434 TSCPD domain SYN_00584 ca5f25ace52516b0e1a30d7694c4a4fc 344 Gene3D G3DSA:3.90.25.10 189 320 2.1E-145 T 11-10-2018 SYN_00584 ca5f25ace52516b0e1a30d7694c4a4fc 344 SUPERFAMILY SSF51735 2 321 3.32E-80 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_00584 ca5f25ace52516b0e1a30d7694c4a4fc 344 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 315 3.1E-137 T 11-10-2018 IPR016040 NAD(P)-binding domain SYN_00584 ca5f25ace52516b0e1a30d7694c4a4fc 344 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 2 322 7.1E-158 T 11-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 SYN_00584 ca5f25ace52516b0e1a30d7694c4a4fc 344 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 2 325 55.167 T 11-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 SYN_00584 ca5f25ace52516b0e1a30d7694c4a4fc 344 Gene3D G3DSA:3.40.50.720 4 306 2.1E-145 T 11-10-2018 SYN_00340 00b32a27dee77369a6f4d8610ff3d456 387 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 33 362 8.8E-137 T 11-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 SYN_00340 00b32a27dee77369a6f4d8610ff3d456 387 Gene3D G3DSA:1.20.1530.20 24 368 6.1E-24 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily SYN_00340 00b32a27dee77369a6f4d8610ff3d456 387 Pfam PF01758 Sodium Bile acid symporter family 78 274 1.9E-66 T 11-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 SYN_00340 00b32a27dee77369a6f4d8610ff3d456 387 PIRSF PIRSF005508 20 378 1.6E-140 T 11-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 SYN_02718 57705a9f154e160d1cd38e058060db45 267 Pfam PF01966 HD domain 44 158 1.1E-11 T 11-10-2018 IPR006674 HD domain SYN_02718 57705a9f154e160d1cd38e058060db45 267 TIGRFAM TIGR00277 HDIG: HDIG domain 44 111 2.6E-7 T 11-10-2018 IPR006675 HDIG domain SYN_02718 57705a9f154e160d1cd38e058060db45 267 Gene3D G3DSA:1.10.3210.10 14 180 7.4E-20 T 11-10-2018 SYN_02718 57705a9f154e160d1cd38e058060db45 267 SUPERFAMILY SSF109604 20 167 1.96E-18 T 11-10-2018 SYN_00175 48417f175e53f164e6f06df1d0d0d467 279 Gene3D G3DSA:3.60.15.10 3 276 3.1E-43 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_00175 48417f175e53f164e6f06df1d0d0d467 279 SMART SM00849 25 238 0.0016 T 11-10-2018 IPR001279 Metallo-beta-lactamase SYN_00175 48417f175e53f164e6f06df1d0d0d467 279 Pfam PF12706 Beta-lactamase superfamily domain 39 239 5.2E-21 T 11-10-2018 IPR001279 Metallo-beta-lactamase SYN_00175 48417f175e53f164e6f06df1d0d0d467 279 SUPERFAMILY SSF56281 1 256 2.1E-41 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_02793 d291230e3e17693027bfe53d1037dbd5 782 TIGRFAM TIGR00277 HDIG: HDIG domain 554 652 2.1E-22 T 11-10-2018 IPR006675 HDIG domain SYN_02793 d291230e3e17693027bfe53d1037dbd5 782 Pfam PF07698 7TM receptor with intracellular HD hydrolase 333 532 4.9E-42 T 11-10-2018 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain SYN_02793 d291230e3e17693027bfe53d1037dbd5 782 Pfam PF01966 HD domain 557 702 1.9E-13 T 11-10-2018 IPR006674 HD domain SYN_02793 d291230e3e17693027bfe53d1037dbd5 782 Gene3D G3DSA:1.10.3210.10 520 672 8.1E-20 T 11-10-2018 SYN_02793 d291230e3e17693027bfe53d1037dbd5 782 SMART SM00471 553 712 1.7E-5 T 11-10-2018 IPR003607 HD/PDEase domain SYN_02793 d291230e3e17693027bfe53d1037dbd5 782 Pfam PF07697 7TM-HD extracellular 63 318 8.5E-40 T 11-10-2018 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain SYN_02793 d291230e3e17693027bfe53d1037dbd5 782 SUPERFAMILY SSF109604 552 702 1.19E-13 T 11-10-2018 SYN_01566 1792e76ce54e1680e53e8314b4b872b6 316 Gene3D G3DSA:3.40.50.720 4 288 4.1E-72 T 11-10-2018 SYN_01566 1792e76ce54e1680e53e8314b4b872b6 316 Gene3D G3DSA:3.30.360.10 121 301 4.1E-72 T 11-10-2018 SYN_01566 1792e76ce54e1680e53e8314b4b872b6 316 SUPERFAMILY SSF51735 2 151 1.46E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_01566 1792e76ce54e1680e53e8314b4b872b6 316 SUPERFAMILY SSF55347 135 282 2.45E-11 T 11-10-2018 SYN_01566 1792e76ce54e1680e53e8314b4b872b6 316 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 120 3.0E-29 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 SYN_01780 04998ba6ec008459ea1369661f446fe6 705 SUPERFAMILY SSF55666 458 556 6.73E-27 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 SYN_01780 04998ba6ec008459ea1369661f446fe6 705 SMART SM00322 560 625 4.2E-11 T 11-10-2018 IPR004087 K Homology domain GO:0003676 SYN_01780 04998ba6ec008459ea1369661f446fe6 705 SUPERFAMILY SSF46915 236 333 2.88E-19 T 11-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SYN_01780 04998ba6ec008459ea1369661f446fe6 705 SUPERFAMILY SSF50249 616 700 6.17E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_01780 04998ba6ec008459ea1369661f446fe6 705 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 251 328 1.5E-12 T 11-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SYN_01780 04998ba6ec008459ea1369661f446fe6 705 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 1 701 30.195 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SYN_01780 04998ba6ec008459ea1369661f446fe6 705 Pfam PF01138 3' exoribonuclease family, domain 1 331 464 1.2E-18 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 SYN_01780 04998ba6ec008459ea1369661f446fe6 705 Pfam PF01138 3' exoribonuclease family, domain 1 12 142 6.4E-20 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 SYN_01780 04998ba6ec008459ea1369661f446fe6 705 Pfam PF00575 S1 RNA binding domain 628 698 8.3E-19 T 11-10-2018 IPR003029 S1 domain GO:0003676 SYN_01780 04998ba6ec008459ea1369661f446fe6 705 Pfam PF00013 KH domain 564 620 1.7E-11 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 SYN_01780 04998ba6ec008459ea1369661f446fe6 705 SUPERFAMILY SSF54791 560 637 1.63E-17 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 SYN_01780 04998ba6ec008459ea1369661f446fe6 705 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 699 2.4E-297 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SYN_01780 04998ba6ec008459ea1369661f446fe6 705 Gene3D G3DSA:3.30.1370.10 558 629 2.2E-19 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 SYN_01780 04998ba6ec008459ea1369661f446fe6 705 Gene3D G3DSA:2.40.50.140 630 700 2.8E-28 T 11-10-2018 SYN_01780 04998ba6ec008459ea1369661f446fe6 705 Pfam PF03725 3' exoribonuclease family, domain 2 145 220 2.0E-18 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 SYN_01780 04998ba6ec008459ea1369661f446fe6 705 Pfam PF03725 3' exoribonuclease family, domain 2 468 536 6.2E-5 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 SYN_01780 04998ba6ec008459ea1369661f446fe6 705 SUPERFAMILY SSF55666 143 244 1.21E-18 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 SYN_01780 04998ba6ec008459ea1369661f446fe6 705 SUPERFAMILY SSF54211 6 142 2.94E-49 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SYN_01780 04998ba6ec008459ea1369661f446fe6 705 SUPERFAMILY SSF54211 305 495 1.62E-46 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SYN_01780 04998ba6ec008459ea1369661f446fe6 705 Gene3D G3DSA:3.30.230.70 244 557 8.7E-109 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 SYN_01780 04998ba6ec008459ea1369661f446fe6 705 SMART SM00316 628 698 1.3E-24 T 11-10-2018 IPR022967 RNA-binding domain, S1 SYN_01780 04998ba6ec008459ea1369661f446fe6 705 Gene3D G3DSA:3.30.230.70 1 243 5.6E-77 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 SYN_01780 04998ba6ec008459ea1369661f446fe6 705 PIRSF PIRSF005499 1 704 3.8E-281 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SYN_00419 5f9e8aa0ef0b07b29cda6b46bfea0843 116 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 115 1.0E-35 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 SYN_00419 5f9e8aa0ef0b07b29cda6b46bfea0843 116 Gene3D G3DSA:2.40.40.20 1 116 1.2E-55 T 11-10-2018 SYN_00419 5f9e8aa0ef0b07b29cda6b46bfea0843 116 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 116 72.483 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 SYN_00419 5f9e8aa0ef0b07b29cda6b46bfea0843 116 PIRSF PIRSF006246 1 116 4.9E-53 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 SYN_00419 5f9e8aa0ef0b07b29cda6b46bfea0843 116 Pfam PF02261 Aspartate decarboxylase 1 114 6.6E-54 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 SYN_00419 5f9e8aa0ef0b07b29cda6b46bfea0843 116 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 115 7.8E-52 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 SYN_00419 5f9e8aa0ef0b07b29cda6b46bfea0843 116 SUPERFAMILY SSF50692 1 115 5.09E-51 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily SYN_02552 d27d8ade8f97bf4e6e811066eff9f576 1230 SUPERFAMILY SSF52540 9 839 3.29E-109 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02552 d27d8ade8f97bf4e6e811066eff9f576 1230 Gene3D G3DSA:1.10.486.10 594 739 2.7E-116 T 11-10-2018 SYN_02552 d27d8ade8f97bf4e6e811066eff9f576 1230 Pfam PF13361 UvrD-like helicase C-terminal domain 446 636 3.9E-9 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SYN_02552 d27d8ade8f97bf4e6e811066eff9f576 1230 Gene3D G3DSA:1.10.3170.10 146 349 7.4E-120 T 11-10-2018 SYN_02552 d27d8ade8f97bf4e6e811066eff9f576 1230 Gene3D G3DSA:3.40.50.300 451 841 2.7E-116 T 11-10-2018 SYN_02552 d27d8ade8f97bf4e6e811066eff9f576 1230 Pfam PF13361 UvrD-like helicase C-terminal domain 689 835 2.1E-12 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SYN_02552 d27d8ade8f97bf4e6e811066eff9f576 1230 Gene3D G3DSA:3.90.320.10 924 1222 2.8E-80 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal SYN_02552 d27d8ade8f97bf4e6e811066eff9f576 1230 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 442 2.4E-53 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 SYN_02552 d27d8ade8f97bf4e6e811066eff9f576 1230 SUPERFAMILY SSF52980 934 1214 4.66E-67 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 SYN_02552 d27d8ade8f97bf4e6e811066eff9f576 1230 Gene3D G3DSA:3.40.50.300 5 441 7.4E-120 T 11-10-2018 SYN_02552 d27d8ade8f97bf4e6e811066eff9f576 1230 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 5 1210 2.3E-275 T 11-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 SYN_02552 d27d8ade8f97bf4e6e811066eff9f576 1230 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 2 1217 21.026 T 11-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 SYN_02552 d27d8ade8f97bf4e6e811066eff9f576 1230 Pfam PF12705 PD-(D/E)XK nuclease superfamily 978 1188 8.7E-5 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type SYN_02232 355adf20670f291532a327395706b2cc 366 PIRSF PIRSF015647 1 366 6.2E-158 T 11-10-2018 IPR002803 Fructose-1,6-bisphosphatase, class V KEGG: 00010+4.1.2.13+3.1.3.11|KEGG: 00030+4.1.2.13+3.1.3.11|KEGG: 00051+4.1.2.13+3.1.3.11|KEGG: 00680+4.1.2.13+3.1.3.11|KEGG: 00710+4.1.2.13+3.1.3.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 SYN_02232 355adf20670f291532a327395706b2cc 366 Hamap MF_02067 Fructose-1,6-bisphosphate aldolase/phosphatase [fbp]. 1 363 58.488 T 11-10-2018 IPR002803 Fructose-1,6-bisphosphatase, class V KEGG: 00010+4.1.2.13+3.1.3.11|KEGG: 00030+4.1.2.13+3.1.3.11|KEGG: 00051+4.1.2.13+3.1.3.11|KEGG: 00680+4.1.2.13+3.1.3.11|KEGG: 00710+4.1.2.13+3.1.3.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 SYN_02232 355adf20670f291532a327395706b2cc 366 ProDom PD014260 DIHYDROOROTATE DEHYDROGENASE THERMOPHILE-SPECIFIC TA1428 ST0318 BLL2851 16-BISPHOSPHATASE APE1109 PF0613 MJ0299 2 362 9.0E-119 T 11-10-2018 IPR002803 Fructose-1,6-bisphosphatase, class V KEGG: 00010+4.1.2.13+3.1.3.11|KEGG: 00030+4.1.2.13+3.1.3.11|KEGG: 00051+4.1.2.13+3.1.3.11|KEGG: 00680+4.1.2.13+3.1.3.11|KEGG: 00710+4.1.2.13+3.1.3.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 SYN_02232 355adf20670f291532a327395706b2cc 366 Pfam PF01950 Fructose-1,6-bisphosphatase 2 363 6.7E-161 T 11-10-2018 IPR002803 Fructose-1,6-bisphosphatase, class V KEGG: 00010+4.1.2.13+3.1.3.11|KEGG: 00030+4.1.2.13+3.1.3.11|KEGG: 00051+4.1.2.13+3.1.3.11|KEGG: 00680+4.1.2.13+3.1.3.11|KEGG: 00710+4.1.2.13+3.1.3.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 SYN_02232 355adf20670f291532a327395706b2cc 366 SUPERFAMILY SSF111249 2 363 9.42E-147 T 11-10-2018 IPR036076 Fructose-1,6-bisphosphatase, class V superfamily KEGG: 00010+3.1.3.11+4.1.2.13|KEGG: 00030+3.1.3.11+4.1.2.13|KEGG: 00051+3.1.3.11+4.1.2.13|KEGG: 00680+3.1.3.11+4.1.2.13|KEGG: 00710+3.1.3.11+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 SYN_01043 1826e0f49a4610b2efc0e5b89bbefa8b 145 SUPERFAMILY SSF46689 4 94 5.2E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SYN_01043 1826e0f49a4610b2efc0e5b89bbefa8b 145 Pfam PF01527 Transposase 4 85 2.0E-9 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SYN_00952 ff72ef533e10a0fdb5c0ce30f29d49d4 296 Gene3D G3DSA:1.10.443.10 110 290 7.4E-68 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 SYN_00952 ff72ef533e10a0fdb5c0ce30f29d49d4 296 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 7 295 9.1E-116 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 SYN_00952 ff72ef533e10a0fdb5c0ce30f29d49d4 296 Gene3D G3DSA:1.10.150.130 2 98 2.7E-27 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal SYN_00952 ff72ef533e10a0fdb5c0ce30f29d49d4 296 Pfam PF00589 Phage integrase family 112 281 9.2E-49 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SYN_00952 ff72ef533e10a0fdb5c0ce30f29d49d4 296 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 4 296 57.086 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD SYN_00952 ff72ef533e10a0fdb5c0ce30f29d49d4 296 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 2 296 57.07 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 SYN_00952 ff72ef533e10a0fdb5c0ce30f29d49d4 296 SUPERFAMILY SSF56349 4 288 4.71E-60 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SYN_00952 ff72ef533e10a0fdb5c0ce30f29d49d4 296 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 6 89 1.1E-25 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SYN_00526 6f7b98ddcdb0de74571878e2415e90ee 213 Gene3D G3DSA:3.60.21.10 1 213 1.4E-70 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like SYN_00526 6f7b98ddcdb0de74571878e2415e90ee 213 SUPERFAMILY SSF56300 2 202 7.06E-55 T 11-10-2018 SYN_00526 6f7b98ddcdb0de74571878e2415e90ee 213 Pfam PF00149 Calcineurin-like phosphoesterase 3 179 4.4E-20 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 SYN_00973 4b8f0016cb1d08c38e6c62a9b644a6cd 472 Gene3D G3DSA:1.10.10.60 417 471 1.2E-12 T 11-10-2018 SYN_00973 4b8f0016cb1d08c38e6c62a9b644a6cd 472 Gene3D G3DSA:1.10.8.60 327 408 3.1E-28 T 11-10-2018 SYN_00973 4b8f0016cb1d08c38e6c62a9b644a6cd 472 Pfam PF00072 Response regulator receiver domain 17 121 3.1E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00973 4b8f0016cb1d08c38e6c62a9b644a6cd 472 SUPERFAMILY SSF46689 368 468 4.93E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SYN_00973 4b8f0016cb1d08c38e6c62a9b644a6cd 472 Gene3D G3DSA:3.40.50.2300 15 133 1.1E-35 T 11-10-2018 SYN_00973 4b8f0016cb1d08c38e6c62a9b644a6cd 472 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 241 256 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SYN_00973 4b8f0016cb1d08c38e6c62a9b644a6cd 472 SUPERFAMILY SSF52172 12 199 2.7E-44 T 11-10-2018 IPR011006 CheY-like superfamily SYN_00973 4b8f0016cb1d08c38e6c62a9b644a6cd 472 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 2.7E-9 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_00973 4b8f0016cb1d08c38e6c62a9b644a6cd 472 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 469 2.7E-9 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_00973 4b8f0016cb1d08c38e6c62a9b644a6cd 472 Pfam PF02954 Bacterial regulatory protein, Fis family 428 466 4.3E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_00973 4b8f0016cb1d08c38e6c62a9b644a6cd 472 SMART SM00382 175 318 7.1E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00973 4b8f0016cb1d08c38e6c62a9b644a6cd 472 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 179 192 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SYN_00973 4b8f0016cb1d08c38e6c62a9b644a6cd 472 SUPERFAMILY SSF52540 155 397 1.17E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00973 4b8f0016cb1d08c38e6c62a9b644a6cd 472 Gene3D G3DSA:3.40.50.300 143 326 2.0E-62 T 11-10-2018 SYN_00973 4b8f0016cb1d08c38e6c62a9b644a6cd 472 SMART SM00448 15 126 8.1E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00973 4b8f0016cb1d08c38e6c62a9b644a6cd 472 Pfam PF00158 Sigma-54 interaction domain 156 322 5.4E-69 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SYN_00973 4b8f0016cb1d08c38e6c62a9b644a6cd 472 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 368 377 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site SYN_01934 479da73e2411ff84a612e29266260304 354 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 SYN_01934 479da73e2411ff84a612e29266260304 354 SUPERFAMILY SSF103263 4 351 4.58E-132 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 SYN_01934 479da73e2411ff84a612e29266260304 354 Hamap MF_00300 Chorismate synthase [aroC]. 10 354 36.733 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 SYN_01934 479da73e2411ff84a612e29266260304 354 Gene3D G3DSA:3.60.150.10 1 354 2.1E-144 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 SYN_01934 479da73e2411ff84a612e29266260304 354 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 SYN_01934 479da73e2411ff84a612e29266260304 354 ProSitePatterns PS00789 Chorismate synthase signature 3. 321 337 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 SYN_01934 479da73e2411ff84a612e29266260304 354 PIRSF PIRSF001456 3 353 6.9E-138 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 SYN_01934 479da73e2411ff84a612e29266260304 354 Pfam PF01264 Chorismate synthase 10 347 1.9E-135 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 SYN_01934 479da73e2411ff84a612e29266260304 354 TIGRFAM TIGR00033 aroC: chorismate synthase 10 351 9.4E-130 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 SYN_02726 3047f36a1b471731d6e1d14baa907bdf 579 Pfam PF13382 Adenine deaminase C-terminal domain 425 569 3.5E-31 T 11-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 SYN_02726 3047f36a1b471731d6e1d14baa907bdf 579 SUPERFAMILY SSF51338 9 373 1.08E-18 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 SYN_02726 3047f36a1b471731d6e1d14baa907bdf 579 Pfam PF01979 Amidohydrolase family 79 346 5.9E-13 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 SYN_02726 3047f36a1b471731d6e1d14baa907bdf 579 Gene3D G3DSA:2.30.40.10 17 364 1.5E-102 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 SYN_02726 3047f36a1b471731d6e1d14baa907bdf 579 Gene3D G3DSA:3.20.20.140 83 327 1.5E-102 T 11-10-2018 SYN_02726 3047f36a1b471731d6e1d14baa907bdf 579 SUPERFAMILY SSF51556 83 329 1.68E-23 T 11-10-2018 IPR032466 Metal-dependent hydrolase SYN_02026 6334dcc1d4f1c5e284644c74474cba65 878 SUPERFAMILY SSF55681 6 247 3.23E-108 T 11-10-2018 SYN_02026 6334dcc1d4f1c5e284644c74474cba65 878 Pfam PF01411 tRNA synthetases class II (A) 7 561 6.6E-218 T 11-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 SYN_02026 6334dcc1d4f1c5e284644c74474cba65 878 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 878 188.158 T 11-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 SYN_02026 6334dcc1d4f1c5e284644c74474cba65 878 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 861 2.1E-304 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 SYN_02026 6334dcc1d4f1c5e284644c74474cba65 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 201 212 4.5E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 SYN_02026 6334dcc1d4f1c5e284644c74474cba65 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 302 315 4.5E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 SYN_02026 6334dcc1d4f1c5e284644c74474cba65 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 4.5E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 SYN_02026 6334dcc1d4f1c5e284644c74474cba65 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 278 294 4.5E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 SYN_02026 6334dcc1d4f1c5e284644c74474cba65 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 228 241 4.5E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 SYN_02026 6334dcc1d4f1c5e284644c74474cba65 878 Pfam PF02272 DHHA1 domain 739 878 1.8E-24 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 SYN_02026 6334dcc1d4f1c5e284644c74474cba65 878 Gene3D G3DSA:3.30.54.20 631 684 1.7E-50 T 11-10-2018 SYN_02026 6334dcc1d4f1c5e284644c74474cba65 878 SUPERFAMILY SSF55186 561 714 7.06E-50 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 SYN_02026 6334dcc1d4f1c5e284644c74474cba65 878 Gene3D G3DSA:2.40.30.130 486 559 4.5E-7 T 11-10-2018 SYN_02026 6334dcc1d4f1c5e284644c74474cba65 878 SUPERFAMILY SSF50447 491 559 1.52E-13 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily SYN_02026 6334dcc1d4f1c5e284644c74474cba65 878 SMART SM00863 660 703 2.7E-22 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 SYN_02026 6334dcc1d4f1c5e284644c74474cba65 878 Gene3D G3DSA:3.30.980.10 570 704 1.7E-50 T 11-10-2018 SYN_02026 6334dcc1d4f1c5e284644c74474cba65 878 SUPERFAMILY SSF101353 248 445 4.45E-67 T 11-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 SYN_02026 6334dcc1d4f1c5e284644c74474cba65 878 Gene3D G3DSA:3.30.930.10 3 244 4.2E-113 T 11-10-2018 SYN_02026 6334dcc1d4f1c5e284644c74474cba65 878 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 660 703 4.5E-19 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 SYN_02026 6334dcc1d4f1c5e284644c74474cba65 878 Gene3D G3DSA:3.10.310.40 771 878 2.3E-34 T 11-10-2018 SYN_00456 8ef52f245e1e91203b86b3282f23d5ed 139 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 31 1.3E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site SYN_00456 8ef52f245e1e91203b86b3282f23d5ed 139 SUPERFAMILY SSF54523 11 65 3.45E-6 T 11-10-2018 SYN_00456 8ef52f245e1e91203b86b3282f23d5ed 139 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 31 1.5E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site SYN_00200 2c6ca0db8a06ed6d3c07b4a55f6a5c25 1223 Gene3D G3DSA:3.40.50.300 1 315 1.5E-43 T 11-10-2018 SYN_00200 2c6ca0db8a06ed6d3c07b4a55f6a5c25 1223 SUPERFAMILY SSF52540 1 1206 9.02E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00200 2c6ca0db8a06ed6d3c07b4a55f6a5c25 1223 Pfam PF13476 AAA domain 7 210 2.9E-22 T 11-10-2018 IPR038729 Rad50/SbcC-type AAA domain SYN_00200 2c6ca0db8a06ed6d3c07b4a55f6a5c25 1223 SUPERFAMILY SSF52540 1 267 2.44E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00200 2c6ca0db8a06ed6d3c07b4a55f6a5c25 1223 Gene3D G3DSA:3.40.50.300 947 1215 8.8E-24 T 11-10-2018 SYN_00200 2c6ca0db8a06ed6d3c07b4a55f6a5c25 1223 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1113 1177 9.2E-14 T 11-10-2018 SYN_00163 0d47d402b5f0d5187b6ab7983a59a064 588 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 369 4.1E-17 T 11-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 SYN_00163 0d47d402b5f0d5187b6ab7983a59a064 588 Gene3D G3DSA:1.10.8.60 8 239 1.2E-109 T 11-10-2018 SYN_00163 0d47d402b5f0d5187b6ab7983a59a064 588 Gene3D G3DSA:3.40.50.300 13 177 1.2E-109 T 11-10-2018 SYN_00163 0d47d402b5f0d5187b6ab7983a59a064 588 SUPERFAMILY SSF48019 244 368 3.06E-16 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 SYN_00163 0d47d402b5f0d5187b6ab7983a59a064 588 SUPERFAMILY SSF52540 32 219 6.25E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00163 0d47d402b5f0d5187b6ab7983a59a064 588 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.2E-7 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 SYN_00163 0d47d402b5f0d5187b6ab7983a59a064 588 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.2E-7 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 SYN_00163 0d47d402b5f0d5187b6ab7983a59a064 588 SMART SM00382 37 179 3.8E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00163 0d47d402b5f0d5187b6ab7983a59a064 588 Gene3D G3DSA:1.20.272.10 247 360 4.0E-8 T 11-10-2018 SYN_00163 0d47d402b5f0d5187b6ab7983a59a064 588 Pfam PF13177 DNA polymerase III, delta subunit 20 178 2.2E-45 T 11-10-2018 SYN_00163 0d47d402b5f0d5187b6ab7983a59a064 588 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 358 7.8E-141 T 11-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 SYN_00590 a8834264e2050c94ac05460d44c98d4e 485 SMART SM00448 8 119 5.2E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00590 a8834264e2050c94ac05460d44c98d4e 485 SUPERFAMILY SSF46689 360 461 6.09E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SYN_00590 a8834264e2050c94ac05460d44c98d4e 485 Pfam PF02954 Bacterial regulatory protein, Fis family 417 459 2.1E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_00590 a8834264e2050c94ac05460d44c98d4e 485 Pfam PF00158 Sigma-54 interaction domain 148 313 1.7E-61 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SYN_00590 a8834264e2050c94ac05460d44c98d4e 485 Gene3D G3DSA:3.40.50.2300 6 138 5.8E-28 T 11-10-2018 SYN_00590 a8834264e2050c94ac05460d44c98d4e 485 Gene3D G3DSA:1.10.8.60 318 396 5.4E-24 T 11-10-2018 SYN_00590 a8834264e2050c94ac05460d44c98d4e 485 SUPERFAMILY SSF52540 147 390 1.14E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00590 a8834264e2050c94ac05460d44c98d4e 485 SUPERFAMILY SSF52172 6 192 2.85E-35 T 11-10-2018 IPR011006 CheY-like superfamily SYN_00590 a8834264e2050c94ac05460d44c98d4e 485 Gene3D G3DSA:3.40.50.300 139 317 1.5E-59 T 11-10-2018 SYN_00590 a8834264e2050c94ac05460d44c98d4e 485 Gene3D G3DSA:1.10.10.60 417 461 6.1E-10 T 11-10-2018 SYN_00590 a8834264e2050c94ac05460d44c98d4e 485 SMART SM00382 168 311 1.1E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00590 a8834264e2050c94ac05460d44c98d4e 485 Pfam PF00072 Response regulator receiver domain 10 119 2.6E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00590 a8834264e2050c94ac05460d44c98d4e 485 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 360 369 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site SYN_00590 a8834264e2050c94ac05460d44c98d4e 485 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 172 185 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SYN_00774 0abb1744f385f7e0a280b7c6a8a4f228 314 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_00774 0abb1744f385f7e0a280b7c6a8a4f228 314 SMART SM00382 40 232 5.8E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00774 0abb1744f385f7e0a280b7c6a8a4f228 314 Pfam PF00005 ABC transporter 32 174 1.5E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_00774 0abb1744f385f7e0a280b7c6a8a4f228 314 Gene3D G3DSA:3.40.50.300 3 247 1.1E-72 T 11-10-2018 SYN_00774 0abb1744f385f7e0a280b7c6a8a4f228 314 SUPERFAMILY SSF52540 11 236 1.25E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00913 ca34d572f97db0c32d23210fdbb1fdaf 213 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 7 207 8.5E-63 T 11-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 SYN_00913 ca34d572f97db0c32d23210fdbb1fdaf 213 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 6 213 34.568 T 11-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 SYN_00913 ca34d572f97db0c32d23210fdbb1fdaf 213 Pfam PF02666 Phosphatidylserine decarboxylase 43 208 1.0E-35 T 11-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 SYN_02352 16b05440716d0cc4638cc65fee621adc 102 Pfam PF03795 YCII-related domain 23 89 2.0E-5 T 11-10-2018 IPR005545 YCII-related SYN_02352 16b05440716d0cc4638cc65fee621adc 102 SUPERFAMILY SSF54909 16 91 2.95E-12 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel SYN_01040 9cb33f397503c843d7ee95c7408302f9 653 SUPERFAMILY SSF51230 583 650 1.3E-19 T 11-10-2018 IPR011053 Single hybrid motif SYN_01040 9cb33f397503c843d7ee95c7408302f9 653 Pfam PF02436 Conserved carboxylase domain 331 528 2.6E-37 T 11-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 SYN_01040 9cb33f397503c843d7ee95c7408302f9 653 Gene3D G3DSA:3.20.20.70 8 507 1.0E-112 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_01040 9cb33f397503c843d7ee95c7408302f9 653 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 607 624 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SYN_01040 9cb33f397503c843d7ee95c7408302f9 653 Pfam PF00682 HMGL-like 186 308 1.5E-11 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 SYN_01040 9cb33f397503c843d7ee95c7408302f9 653 Gene3D G3DSA:2.40.50.100 581 653 9.8E-22 T 11-10-2018 SYN_01040 9cb33f397503c843d7ee95c7408302f9 653 SUPERFAMILY SSF51569 46 322 1.34E-41 T 11-10-2018 SYN_01040 9cb33f397503c843d7ee95c7408302f9 653 SUPERFAMILY SSF89000 336 505 3.92E-34 T 11-10-2018 SYN_01040 9cb33f397503c843d7ee95c7408302f9 653 Pfam PF00364 Biotin-requiring enzyme 590 650 1.4E-16 T 11-10-2018 IPR000089 Biotin/lipoyl attachment SYN_00410 614b319ccf102fa95e5718e5cd09bc33 248 Gene3D G3DSA:3.40.50.300 1 244 2.3E-76 T 11-10-2018 SYN_00410 614b319ccf102fa95e5718e5cd09bc33 248 SUPERFAMILY SSF52540 1 230 3.41E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00410 614b319ccf102fa95e5718e5cd09bc33 248 SMART SM00382 26 214 5.4E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00410 614b319ccf102fa95e5718e5cd09bc33 248 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_00410 614b319ccf102fa95e5718e5cd09bc33 248 Pfam PF00005 ABC transporter 17 165 4.9E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_00935 dd5e4c3bcebf11c9133f80f14d7e0322 632 SUPERFAMILY SSF100950 205 448 2.79E-63 T 11-10-2018 IPR037171 NagB/RpiA transferase-like SYN_00935 dd5e4c3bcebf11c9133f80f14d7e0322 632 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 12 195 1.3E-43 T 11-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 SYN_00935 dd5e4c3bcebf11c9133f80f14d7e0322 632 Gene3D G3DSA:3.40.1080.10 8 198 3.5E-60 T 11-10-2018 SYN_00935 dd5e4c3bcebf11c9133f80f14d7e0322 632 Gene3D G3DSA:3.40.1080.20 304 452 2.0E-61 T 11-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily SYN_00935 dd5e4c3bcebf11c9133f80f14d7e0322 632 Gene3D G3DSA:3.30.750.70 200 302 4.2E-36 T 11-10-2018 SYN_00935 dd5e4c3bcebf11c9133f80f14d7e0322 632 SUPERFAMILY SSF55729 475 618 2.85E-14 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase SYN_00935 dd5e4c3bcebf11c9133f80f14d7e0322 632 SUPERFAMILY SSF100950 13 236 1.94E-39 T 11-10-2018 IPR037171 NagB/RpiA transferase-like SYN_00935 dd5e4c3bcebf11c9133f80f14d7e0322 632 Gene3D G3DSA:3.40.630.30 467 631 1.1E-26 T 11-10-2018 SYN_00935 dd5e4c3bcebf11c9133f80f14d7e0322 632 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 286 439 5.0E-63 T 11-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain SYN_00935 dd5e4c3bcebf11c9133f80f14d7e0322 632 Pfam PF00583 Acetyltransferase (GNAT) family 520 608 9.0E-7 T 11-10-2018 IPR000182 GNAT domain SYN_02534 ff40da5af8fce0ddb9b19102e501db5b 426 Gene3D G3DSA:3.30.930.10 6 327 7.4E-117 T 11-10-2018 SYN_02534 ff40da5af8fce0ddb9b19102e501db5b 426 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 11 410 1.8E-151 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 SYN_02534 ff40da5af8fce0ddb9b19102e501db5b 426 PIRSF PIRSF001549 5 422 2.7E-119 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 SYN_02534 ff40da5af8fce0ddb9b19102e501db5b 426 SUPERFAMILY SSF52954 329 423 3.44E-21 T 11-10-2018 SYN_02534 ff40da5af8fce0ddb9b19102e501db5b 426 SUPERFAMILY SSF55681 11 321 1.89E-95 T 11-10-2018 SYN_02534 ff40da5af8fce0ddb9b19102e501db5b 426 Pfam PF03129 Anticodon binding domain 334 421 1.9E-12 T 11-10-2018 IPR004154 Anticodon-binding SYN_02534 ff40da5af8fce0ddb9b19102e501db5b 426 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 7 425 32.19 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 SYN_02534 ff40da5af8fce0ddb9b19102e501db5b 426 Pfam PF13393 Histidyl-tRNA synthetase 14 316 1.2E-48 T 11-10-2018 SYN_02534 ff40da5af8fce0ddb9b19102e501db5b 426 Gene3D G3DSA:3.40.50.800 330 425 4.1E-24 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily SYN_02570 2d4a2a9b35efbda5248bb3ea634833d6 354 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 48 172 1.7E-10 T 11-10-2018 IPR000014 PAS domain SYN_02570 2d4a2a9b35efbda5248bb3ea634833d6 354 Gene3D G3DSA:3.30.70.270 171 348 2.2E-64 T 11-10-2018 SYN_02570 2d4a2a9b35efbda5248bb3ea634833d6 354 SMART SM00267 166 338 1.4E-67 T 11-10-2018 IPR000160 GGDEF domain SYN_02570 2d4a2a9b35efbda5248bb3ea634833d6 354 Gene3D G3DSA:3.30.450.20 45 164 8.2E-22 T 11-10-2018 SYN_02570 2d4a2a9b35efbda5248bb3ea634833d6 354 Pfam PF00990 Diguanylate cyclase, GGDEF domain 177 334 4.5E-55 T 11-10-2018 IPR000160 GGDEF domain SYN_02570 2d4a2a9b35efbda5248bb3ea634833d6 354 Pfam PF13426 PAS domain 59 165 2.4E-11 T 11-10-2018 IPR000014 PAS domain SYN_02570 2d4a2a9b35efbda5248bb3ea634833d6 354 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 174 335 4.8E-46 T 11-10-2018 IPR000160 GGDEF domain SYN_02570 2d4a2a9b35efbda5248bb3ea634833d6 354 SUPERFAMILY SSF55073 182 339 3.84E-54 T 11-10-2018 IPR029787 Nucleotide cyclase SYN_02570 2d4a2a9b35efbda5248bb3ea634833d6 354 SUPERFAMILY SSF55785 69 174 9.5E-16 T 11-10-2018 IPR035965 PAS domain superfamily SYN_00063 cf75758dd64b35baed64784e0b6472b8 1381 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1357 19.162 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_00063 cf75758dd64b35baed64784e0b6472b8 1381 Gene3D G3DSA:2.40.50.100 1009 1107 1.5E-29 T 11-10-2018 SYN_00063 cf75758dd64b35baed64784e0b6472b8 1381 Pfam PF04998 RNA polymerase Rpb1, domain 5 753 1296 6.4E-73 T 11-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_00063 cf75758dd64b35baed64784e0b6472b8 1381 Gene3D G3DSA:1.10.150.390 1296 1356 1.0E-27 T 11-10-2018 SYN_00063 cf75758dd64b35baed64784e0b6472b8 1381 Pfam PF04997 RNA polymerase Rpb1, domain 1 16 343 3.3E-90 T 11-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_00063 cf75758dd64b35baed64784e0b6472b8 1381 Pfam PF05000 RNA polymerase Rpb1, domain 4 661 750 2.5E-18 T 11-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_00063 cf75758dd64b35baed64784e0b6472b8 1381 Gene3D G3DSA:1.10.274.100 491 555 3.5E-23 T 11-10-2018 SYN_00063 cf75758dd64b35baed64784e0b6472b8 1381 Gene3D G3DSA:2.40.50.100 934 1008 5.7E-24 T 11-10-2018 SYN_00063 cf75758dd64b35baed64784e0b6472b8 1381 Gene3D G3DSA:1.10.132.30 629 777 6.1E-63 T 11-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_00063 cf75758dd64b35baed64784e0b6472b8 1381 Pfam PF00623 RNA polymerase Rpb1, domain 2 345 486 2.0E-33 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_00063 cf75758dd64b35baed64784e0b6472b8 1381 Gene3D G3DSA:1.10.40.90 375 417 2.8E-22 T 11-10-2018 SYN_00063 cf75758dd64b35baed64784e0b6472b8 1381 SUPERFAMILY SSF64484 16 1345 0.0 T 11-10-2018 SYN_00063 cf75758dd64b35baed64784e0b6472b8 1381 Pfam PF04983 RNA polymerase Rpb1, domain 3 490 630 1.4E-28 T 11-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_00063 cf75758dd64b35baed64784e0b6472b8 1381 Gene3D G3DSA:2.40.50.100 1132 1195 2.8E-68 T 11-10-2018 SYN_00063 cf75758dd64b35baed64784e0b6472b8 1381 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1006 0.0 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_00063 cf75758dd64b35baed64784e0b6472b8 1381 Gene3D G3DSA:1.10.1790.20 1116 1294 2.8E-68 T 11-10-2018 SYN_00063 cf75758dd64b35baed64784e0b6472b8 1381 SMART SM00663 236 515 5.5E-181 T 11-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_00063 cf75758dd64b35baed64784e0b6472b8 1381 Gene3D G3DSA:1.10.274.100 556 628 4.9E-19 T 11-10-2018 SYN_01095 8145ddace0ab7e477d2b9179cf55ed69 649 SMART SM00028 569 602 0.077 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01095 8145ddace0ab7e477d2b9179cf55ed69 649 SMART SM00028 76 109 2.2E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01095 8145ddace0ab7e477d2b9179cf55ed69 649 SMART SM00028 421 454 0.037 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01095 8145ddace0ab7e477d2b9179cf55ed69 649 SMART SM00028 178 211 200.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01095 8145ddace0ab7e477d2b9179cf55ed69 649 SMART SM00028 490 523 0.11 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01095 8145ddace0ab7e477d2b9179cf55ed69 649 SMART SM00028 212 245 0.058 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01095 8145ddace0ab7e477d2b9179cf55ed69 649 SMART SM00028 246 279 30.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01095 8145ddace0ab7e477d2b9179cf55ed69 649 SMART SM00028 314 347 68.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01095 8145ddace0ab7e477d2b9179cf55ed69 649 SMART SM00028 456 489 84.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01095 8145ddace0ab7e477d2b9179cf55ed69 649 SMART SM00028 42 75 150.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01095 8145ddace0ab7e477d2b9179cf55ed69 649 SMART SM00028 387 420 130.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01095 8145ddace0ab7e477d2b9179cf55ed69 649 SMART SM00028 353 386 71.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01095 8145ddace0ab7e477d2b9179cf55ed69 649 SMART SM00028 110 143 0.004 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01095 8145ddace0ab7e477d2b9179cf55ed69 649 Pfam PF13181 Tetratricopeptide repeat 316 346 0.041 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01095 8145ddace0ab7e477d2b9179cf55ed69 649 Pfam PF13414 TPR repeat 49 88 2.9E-7 T 11-10-2018 SYN_01095 8145ddace0ab7e477d2b9179cf55ed69 649 Gene3D G3DSA:1.25.40.10 44 103 4.0E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_01095 8145ddace0ab7e477d2b9179cf55ed69 649 Gene3D G3DSA:1.25.40.10 104 176 4.3E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_01095 8145ddace0ab7e477d2b9179cf55ed69 649 Gene3D G3DSA:1.25.40.10 177 346 1.2E-27 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_01095 8145ddace0ab7e477d2b9179cf55ed69 649 Pfam PF13432 Tetratricopeptide repeat 358 413 0.0011 T 11-10-2018 SYN_01095 8145ddace0ab7e477d2b9179cf55ed69 649 Pfam PF13432 Tetratricopeptide repeat 575 619 0.0017 T 11-10-2018 SYN_01095 8145ddace0ab7e477d2b9179cf55ed69 649 Pfam PF14559 Tetratricopeptide repeat 121 185 5.5E-7 T 11-10-2018 SYN_01095 8145ddace0ab7e477d2b9179cf55ed69 649 Pfam PF14559 Tetratricopeptide repeat 226 281 4.2E-8 T 11-10-2018 SYN_01095 8145ddace0ab7e477d2b9179cf55ed69 649 Pfam PF09976 Tetratricopeptide repeat-like domain 425 520 4.1E-9 T 11-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 SYN_01095 8145ddace0ab7e477d2b9179cf55ed69 649 SUPERFAMILY SSF48452 359 635 4.36E-28 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_01095 8145ddace0ab7e477d2b9179cf55ed69 649 Gene3D G3DSA:1.25.40.10 347 649 2.9E-48 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_01095 8145ddace0ab7e477d2b9179cf55ed69 649 SUPERFAMILY SSF48452 45 396 1.45E-41 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00859 b9d57167ed2904e07b89bb1d13c547f5 803 SUPERFAMILY SSF51445 143 500 2.32E-17 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily SYN_00859 b9d57167ed2904e07b89bb1d13c547f5 803 Gene3D G3DSA:3.20.20.80 338 495 1.9E-5 T 11-10-2018 SYN_00859 b9d57167ed2904e07b89bb1d13c547f5 803 SUPERFAMILY SSF48452 7 77 4.75E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00859 b9d57167ed2904e07b89bb1d13c547f5 803 Gene3D G3DSA:1.25.40.10 4 86 3.9E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_02425 a3dbfcf58ba31f6259b9279593329501 150 SUPERFAMILY SSF52833 4 149 1.9E-47 T 11-10-2018 IPR036249 Thioredoxin-like superfamily SYN_02425 a3dbfcf58ba31f6259b9279593329501 150 PIRSF PIRSF000216 1 150 1.9E-48 T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02425 a3dbfcf58ba31f6259b9279593329501 150 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 6 149 6.4E-50 T 11-10-2018 SYN_02425 a3dbfcf58ba31f6259b9279593329501 150 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 107 125 - T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02425 a3dbfcf58ba31f6259b9279593329501 150 Gene3D G3DSA:3.40.30.10 67 149 2.8E-29 T 11-10-2018 SYN_02425 a3dbfcf58ba31f6259b9279593329501 150 Gene3D G3DSA:1.10.10.1590 1 66 2.1E-13 T 11-10-2018 SYN_01195 65e863da130d739585bb699cf518782f 434 Gene3D G3DSA:3.40.50.12780 1 327 9.1E-126 T 11-10-2018 SYN_01195 65e863da130d739585bb699cf518782f 434 Gene3D G3DSA:3.30.300.30 328 434 3.5E-35 T 11-10-2018 SYN_01195 65e863da130d739585bb699cf518782f 434 SUPERFAMILY SSF56801 50 398 1.07E-59 T 11-10-2018 SYN_01195 65e863da130d739585bb699cf518782f 434 Pfam PF14535 AMP-binding enzyme C-terminal domain 336 432 6.9E-34 T 11-10-2018 IPR028154 AMP-dependent ligase, C-terminal SYN_01195 65e863da130d739585bb699cf518782f 434 PIRSF PIRSF006444 1 434 7.8E-203 T 11-10-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 SYN_01195 65e863da130d739585bb699cf518782f 434 Pfam PF00501 AMP-binding enzyme 90 287 1.5E-14 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 SYN_02863 fb556752f184710d1b50920f81c66016 295 Hamap MF_00361 NAD kinase [nadK]. 8 287 33.415 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 SYN_02863 fb556752f184710d1b50920f81c66016 295 Pfam PF01513 ATP-NAD kinase 9 270 4.7E-67 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 SYN_02863 fb556752f184710d1b50920f81c66016 295 Gene3D G3DSA:2.60.200.30 128 264 6.4E-95 T 11-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 SYN_02863 fb556752f184710d1b50920f81c66016 295 Gene3D G3DSA:3.40.50.10330 26 287 6.4E-95 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 SYN_02863 fb556752f184710d1b50920f81c66016 295 SUPERFAMILY SSF111331 9 288 4.32E-92 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily SYN_01032 56360ad0524811b6bf3fab1f00a82272 277 Gene3D G3DSA:1.10.287.610 97 152 6.1E-90 T 11-10-2018 SYN_01032 56360ad0524811b6bf3fab1f00a82272 277 Gene3D G3DSA:3.40.50.10490 10 214 6.1E-90 T 11-10-2018 SYN_01032 56360ad0524811b6bf3fab1f00a82272 277 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 SYN_01032 56360ad0524811b6bf3fab1f00a82272 277 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.2E-38 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_01032 56360ad0524811b6bf3fab1f00a82272 277 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.2E-38 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_01032 56360ad0524811b6bf3fab1f00a82272 277 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.2E-38 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_01032 56360ad0524811b6bf3fab1f00a82272 277 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.2E-38 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_01032 56360ad0524811b6bf3fab1f00a82272 277 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.2E-38 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_01032 56360ad0524811b6bf3fab1f00a82272 277 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.2E-38 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_01032 56360ad0524811b6bf3fab1f00a82272 277 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.529 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01032 56360ad0524811b6bf3fab1f00a82272 277 Pfam PF00318 Ribosomal protein S2 9 224 5.7E-94 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_01032 56360ad0524811b6bf3fab1f00a82272 277 SUPERFAMILY SSF52313 6 232 1.1E-94 T 11-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily SYN_01032 56360ad0524811b6bf3fab1f00a82272 277 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 SYN_01032 56360ad0524811b6bf3fab1f00a82272 277 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 2.3E-104 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00034 d8fdd2b640cf4b94654db0b67a7600ba 147 Pfam PF00072 Response regulator receiver domain 31 137 1.2E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00034 d8fdd2b640cf4b94654db0b67a7600ba 147 SUPERFAMILY SSF52172 29 141 1.71E-28 T 11-10-2018 IPR011006 CheY-like superfamily SYN_00034 d8fdd2b640cf4b94654db0b67a7600ba 147 SMART SM00448 29 137 1.0E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00034 d8fdd2b640cf4b94654db0b67a7600ba 147 Gene3D G3DSA:3.40.50.2300 23 144 1.2E-27 T 11-10-2018 SYN_02127 660943e9f342db728cc5d422fa03e5d6 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 28 258 5.0E-64 T 11-10-2018 SYN_02127 660943e9f342db728cc5d422fa03e5d6 259 Gene3D G3DSA:3.40.50.720 20 259 5.1E-81 T 11-10-2018 SYN_02127 660943e9f342db728cc5d422fa03e5d6 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 171 190 9.4E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SYN_02127 660943e9f342db728cc5d422fa03e5d6 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 159 9.4E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SYN_02127 660943e9f342db728cc5d422fa03e5d6 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 98 109 9.4E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SYN_02127 660943e9f342db728cc5d422fa03e5d6 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 98 109 6.5E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SYN_02127 660943e9f342db728cc5d422fa03e5d6 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 190 6.5E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SYN_02127 660943e9f342db728cc5d422fa03e5d6 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 192 209 6.5E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SYN_02127 660943e9f342db728cc5d422fa03e5d6 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 23 40 6.5E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SYN_02127 660943e9f342db728cc5d422fa03e5d6 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 161 6.5E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SYN_02127 660943e9f342db728cc5d422fa03e5d6 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 6.5E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SYN_02127 660943e9f342db728cc5d422fa03e5d6 259 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 22 207 4.3E-6 T 11-10-2018 SYN_02127 660943e9f342db728cc5d422fa03e5d6 259 SUPERFAMILY SSF51735 20 258 8.92E-82 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_00889 7e847cbf5855e90011dbd7e32b6ed21b 347 SUPERFAMILY SSF55326 5 169 4.36E-49 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily SYN_00889 7e847cbf5855e90011dbd7e32b6ed21b 347 Gene3D G3DSA:3.90.650.10 170 345 4.7E-69 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily SYN_00889 7e847cbf5855e90011dbd7e32b6ed21b 347 Gene3D G3DSA:3.30.1330.10 4 169 4.5E-68 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily SYN_00889 7e847cbf5855e90011dbd7e32b6ed21b 347 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 5 346 47.199 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SYN_00889 7e847cbf5855e90011dbd7e32b6ed21b 347 SUPERFAMILY SSF56042 170 339 7.18E-58 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily SYN_00889 7e847cbf5855e90011dbd7e32b6ed21b 347 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 6 336 7.4E-137 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SYN_00889 7e847cbf5855e90011dbd7e32b6ed21b 347 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 163 1.9E-15 T 11-10-2018 IPR016188 PurM-like, N-terminal domain SYN_00889 7e847cbf5855e90011dbd7e32b6ed21b 347 Pfam PF02769 AIR synthase related protein, C-terminal domain 175 341 1.9E-30 T 11-10-2018 IPR010918 PurM-like, C-terminal domain SYN_01459 c287293f68d20b642799df9466c2c000 266 SMART SM00382 45 226 4.2E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01459 c287293f68d20b642799df9466c2c000 266 SUPERFAMILY SSF52540 20 239 1.96E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01459 c287293f68d20b642799df9466c2c000 266 Pfam PF00005 ABC transporter 37 180 1.5E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_01459 c287293f68d20b642799df9466c2c000 266 Gene3D G3DSA:3.40.50.300 8 242 1.6E-68 T 11-10-2018 SYN_02661 815cb5e9868bbd208af577959eed6f0f 318 Pfam PF01370 NAD dependent epimerase/dehydratase family 12 242 1.3E-45 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 SYN_02661 815cb5e9868bbd208af577959eed6f0f 318 Gene3D G3DSA:3.40.50.720 13 244 2.8E-75 T 11-10-2018 SYN_02661 815cb5e9868bbd208af577959eed6f0f 318 Gene3D G3DSA:3.90.25.10 179 308 2.8E-75 T 11-10-2018 SYN_02661 815cb5e9868bbd208af577959eed6f0f 318 SUPERFAMILY SSF51735 8 316 4.87E-79 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_00960 5bfb795455f7731be60e551d2f69e1b0 254 SUPERFAMILY SSF103088 145 250 5.49E-21 T 11-10-2018 IPR036737 OmpA-like domain superfamily SYN_00960 5bfb795455f7731be60e551d2f69e1b0 254 Pfam PF00691 OmpA family 149 243 8.9E-15 T 11-10-2018 IPR006665 OmpA-like domain SYN_00960 5bfb795455f7731be60e551d2f69e1b0 254 Gene3D G3DSA:3.30.1330.60 101 254 2.5E-48 T 11-10-2018 IPR036737 OmpA-like domain superfamily SYN_00960 5bfb795455f7731be60e551d2f69e1b0 254 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 12 64 9.3E-20 T 11-10-2018 IPR025713 Motility protein B, N-terminal domain SYN_01031 780ba84186fe67025949cc2f0e8212d9 357 SUPERFAMILY SSF159283 283 348 1.44E-19 T 11-10-2018 SYN_01031 780ba84186fe67025949cc2f0e8212d9 357 Pfam PF01050 Mannose-6-phosphate isomerase 315 353 1.3E-6 T 11-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 SYN_01031 780ba84186fe67025949cc2f0e8212d9 357 Pfam PF00483 Nucleotidyl transferase 3 284 2.4E-46 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 SYN_01031 780ba84186fe67025949cc2f0e8212d9 357 SUPERFAMILY SSF53448 1 280 7.5E-68 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_01031 780ba84186fe67025949cc2f0e8212d9 357 Gene3D G3DSA:3.90.550.10 1 350 8.4E-122 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_02008 9d55f24acedcdefc9be6d8fe362e0c82 565 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 11-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 SYN_02008 9d55f24acedcdefc9be6d8fe362e0c82 565 Pfam PF01268 Formate--tetrahydrofolate ligase 10 555 5.8E-235 T 11-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 SYN_02008 9d55f24acedcdefc9be6d8fe362e0c82 565 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 328 339 - T 11-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 SYN_02008 9d55f24acedcdefc9be6d8fe362e0c82 565 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 3 557 43.749 T 11-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 SYN_02008 9d55f24acedcdefc9be6d8fe362e0c82 565 Gene3D G3DSA:3.30.1510.10 129 247 3.6E-185 T 11-10-2018 SYN_02008 9d55f24acedcdefc9be6d8fe362e0c82 565 SUPERFAMILY SSF52540 11 554 1.4E-217 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02008 9d55f24acedcdefc9be6d8fe362e0c82 565 Gene3D G3DSA:3.40.50.300 11 428 3.6E-185 T 11-10-2018 SYN_02008 9d55f24acedcdefc9be6d8fe362e0c82 565 Gene3D G3DSA:3.10.410.10 443 532 3.4E-30 T 11-10-2018 SYN_02568 b6f7bbff8b10dc34da347c2b817673f9 387 Gene3D G3DSA:3.40.640.10 58 282 1.4E-102 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SYN_02568 b6f7bbff8b10dc34da347c2b817673f9 387 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 231 240 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 SYN_02568 b6f7bbff8b10dc34da347c2b817673f9 387 Gene3D G3DSA:3.90.1150.10 42 371 1.4E-102 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SYN_02568 b6f7bbff8b10dc34da347c2b817673f9 387 SUPERFAMILY SSF53383 6 382 2.39E-90 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SYN_02568 b6f7bbff8b10dc34da347c2b817673f9 387 Pfam PF00155 Aminotransferase class I and II 42 372 1.1E-48 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SYN_02642 4ddba465e11b559fd20a780cbc589049 430 PIRSF PIRSF000429 69 430 1.4E-115 T 11-10-2018 IPR002155 Thiolase GO:0016747 SYN_02642 4ddba465e11b559fd20a780cbc589049 430 PIRSF PIRSF000429 1 58 1.9E-9 T 11-10-2018 IPR002155 Thiolase GO:0016747 SYN_02642 4ddba465e11b559fd20a780cbc589049 430 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 119 137 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 SYN_02642 4ddba465e11b559fd20a780cbc589049 430 SUPERFAMILY SSF53901 308 429 2.64E-41 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 SYN_02642 4ddba465e11b559fd20a780cbc589049 430 SUPERFAMILY SSF53901 1 305 4.32E-71 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 SYN_02642 4ddba465e11b559fd20a780cbc589049 430 Pfam PF00108 Thiolase, N-terminal domain 78 299 6.1E-79 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 SYN_02642 4ddba465e11b559fd20a780cbc589049 430 Pfam PF00108 Thiolase, N-terminal domain 4 51 3.3E-8 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 SYN_02642 4ddba465e11b559fd20a780cbc589049 430 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 77 428 1.2E-127 T 11-10-2018 IPR002155 Thiolase GO:0016747 SYN_02642 4ddba465e11b559fd20a780cbc589049 430 Pfam PF02803 Thiolase, C-terminal domain 307 429 1.1E-46 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 SYN_02642 4ddba465e11b559fd20a780cbc589049 430 ProSitePatterns PS00099 Thiolases active site. 411 424 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 SYN_00306 2d183867a2b6d6d9bd932f7fcce06c23 111 Pfam PF02416 mttA/Hcf106 family 4 58 2.1E-17 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 SYN_00306 2d183867a2b6d6d9bd932f7fcce06c23 111 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 65 2.8E-17 T 11-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 SYN_00306 2d183867a2b6d6d9bd932f7fcce06c23 111 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 71 16.406 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 SYN_00306 2d183867a2b6d6d9bd932f7fcce06c23 111 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 6.7E-13 T 11-10-2018 SYN_00306 2d183867a2b6d6d9bd932f7fcce06c23 111 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 6.7E-13 T 11-10-2018 SYN_00306 2d183867a2b6d6d9bd932f7fcce06c23 111 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 6.7E-13 T 11-10-2018 SYN_01734 e0334f17c90098dbaed6e924c57233f1 150 Gene3D G3DSA:3.30.420.140 1 143 1.7E-48 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 SYN_01734 e0334f17c90098dbaed6e924c57233f1 150 SUPERFAMILY SSF53098 1 134 9.1E-42 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily SYN_01734 e0334f17c90098dbaed6e924c57233f1 150 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 136 24.608 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SYN_01734 e0334f17c90098dbaed6e924c57233f1 150 SMART SM00732 1 101 6.0E-33 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 SYN_01734 e0334f17c90098dbaed6e924c57233f1 150 Pfam PF03652 Holliday junction resolvase 1 133 7.2E-44 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SYN_01734 e0334f17c90098dbaed6e924c57233f1 150 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 4 133 9.3E-39 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SYN_02576 0d04f659e5a2ee95b6de96059ac0db15 725 SUPERFAMILY SSF52172 12 140 8.4E-37 T 11-10-2018 IPR011006 CheY-like superfamily SYN_02576 0d04f659e5a2ee95b6de96059ac0db15 725 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 220 338 1.1E-6 T 11-10-2018 IPR000014 PAS domain SYN_02576 0d04f659e5a2ee95b6de96059ac0db15 725 Gene3D G3DSA:1.10.287.130 346 417 1.5E-17 T 11-10-2018 SYN_02576 0d04f659e5a2ee95b6de96059ac0db15 725 SMART SM00387 460 584 2.0E-33 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_02576 0d04f659e5a2ee95b6de96059ac0db15 725 Gene3D G3DSA:3.40.50.2300 6 157 1.9E-39 T 11-10-2018 SYN_02576 0d04f659e5a2ee95b6de96059ac0db15 725 PRINTS PR00344 Bacterial sensor protein C-terminal signature 568 581 2.4E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_02576 0d04f659e5a2ee95b6de96059ac0db15 725 PRINTS PR00344 Bacterial sensor protein C-terminal signature 531 541 2.4E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_02576 0d04f659e5a2ee95b6de96059ac0db15 725 PRINTS PR00344 Bacterial sensor protein C-terminal signature 544 562 2.4E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_02576 0d04f659e5a2ee95b6de96059ac0db15 725 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 527 2.4E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_02576 0d04f659e5a2ee95b6de96059ac0db15 725 Gene3D G3DSA:3.40.50.2300 601 723 1.0E-27 T 11-10-2018 SYN_02576 0d04f659e5a2ee95b6de96059ac0db15 725 Pfam PF00512 His Kinase A (phospho-acceptor) domain 356 416 3.6E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_02576 0d04f659e5a2ee95b6de96059ac0db15 725 SUPERFAMILY SSF55785 209 330 9.6E-15 T 11-10-2018 IPR035965 PAS domain superfamily SYN_02576 0d04f659e5a2ee95b6de96059ac0db15 725 Pfam PF13188 PAS domain 224 280 8.4E-7 T 11-10-2018 IPR000014 PAS domain SYN_02576 0d04f659e5a2ee95b6de96059ac0db15 725 SMART SM00388 354 419 5.3E-7 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_02576 0d04f659e5a2ee95b6de96059ac0db15 725 SMART SM00091 224 291 1.1E-5 T 11-10-2018 IPR000014 PAS domain SYN_02576 0d04f659e5a2ee95b6de96059ac0db15 725 Pfam PF00072 Response regulator receiver domain 604 715 1.1E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_02576 0d04f659e5a2ee95b6de96059ac0db15 725 Pfam PF00072 Response regulator receiver domain 14 125 4.1E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_02576 0d04f659e5a2ee95b6de96059ac0db15 725 SUPERFAMILY SSF55874 409 583 7.33E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_02576 0d04f659e5a2ee95b6de96059ac0db15 725 SUPERFAMILY SSF52172 602 720 3.56E-29 T 11-10-2018 IPR011006 CheY-like superfamily SYN_02576 0d04f659e5a2ee95b6de96059ac0db15 725 Gene3D G3DSA:3.30.450.20 212 339 1.6E-14 T 11-10-2018 SYN_02576 0d04f659e5a2ee95b6de96059ac0db15 725 Gene3D G3DSA:3.30.565.10 420 589 6.3E-45 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_02576 0d04f659e5a2ee95b6de96059ac0db15 725 SUPERFAMILY SSF47384 349 417 2.55E-11 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SYN_02576 0d04f659e5a2ee95b6de96059ac0db15 725 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 461 581 5.3E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_02576 0d04f659e5a2ee95b6de96059ac0db15 725 SMART SM00448 12 125 6.8E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_02576 0d04f659e5a2ee95b6de96059ac0db15 725 SMART SM00448 602 715 2.0E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_01664 d7d68c6c44728f6723fabe5b8130631c 439 SUPERFAMILY SSF142019 96 299 1.7E-60 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_01664 d7d68c6c44728f6723fabe5b8130631c 439 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 371 382 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_01664 d7d68c6c44728f6723fabe5b8130631c 439 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 410 421 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_01664 d7d68c6c44728f6723fabe5b8130631c 439 Pfam PF13183 4Fe-4S dicluster domain 371 423 1.7E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_01664 d7d68c6c44728f6723fabe5b8130631c 439 Pfam PF13375 RnfC Barrel sandwich hybrid domain 10 106 1.2E-27 T 11-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain SYN_01664 d7d68c6c44728f6723fabe5b8130631c 439 SUPERFAMILY SSF46548 329 438 1.15E-19 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SYN_01664 d7d68c6c44728f6723fabe5b8130631c 439 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 9 438 5.6E-162 T 11-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 SYN_01664 d7d68c6c44728f6723fabe5b8130631c 439 Gene3D G3DSA:1.10.1060.10 360 438 4.0E-9 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SYN_01664 d7d68c6c44728f6723fabe5b8130631c 439 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 439 147.027 T 11-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 SYN_01664 d7d68c6c44728f6723fabe5b8130631c 439 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 129 278 1.0E-55 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_01664 d7d68c6c44728f6723fabe5b8130631c 439 Pfam PF10531 SLBB domain 291 340 9.3E-12 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_01664 d7d68c6c44728f6723fabe5b8130631c 439 Gene3D G3DSA:3.40.50.11540 134 278 6.3E-16 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_01826 be5f4060058dddcf6929ab96447aac18 232 Pfam PF14335 Domain of unknown function (DUF4391) 6 216 9.2E-59 T 11-10-2018 IPR025503 Protein of unknown function DUF4391 SYN_00341 b7a4df9aaf4afd6acccbc19ad0484447 124 Pfam PF01022 Bacterial regulatory protein, arsR family 13 59 4.6E-18 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SYN_00341 b7a4df9aaf4afd6acccbc19ad0484447 124 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 1.9E-16 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SYN_00341 b7a4df9aaf4afd6acccbc19ad0484447 124 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 1.9E-16 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SYN_00341 b7a4df9aaf4afd6acccbc19ad0484447 124 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 1.9E-16 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SYN_00341 b7a4df9aaf4afd6acccbc19ad0484447 124 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 1.9E-16 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SYN_00341 b7a4df9aaf4afd6acccbc19ad0484447 124 Gene3D G3DSA:1.10.10.10 1 104 3.4E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_00341 b7a4df9aaf4afd6acccbc19ad0484447 124 SMART SM00418 6 88 1.7E-24 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SYN_00341 b7a4df9aaf4afd6acccbc19ad0484447 124 SUPERFAMILY SSF46785 1 98 4.59E-26 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_00609 fac156529f810560b2010fe7da6a91f3 696 Gene3D G3DSA:4.10.860.10 636 690 5.2E-11 T 11-10-2018 SYN_00609 fac156529f810560b2010fe7da6a91f3 696 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 32 684 0.0 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 SYN_00609 fac156529f810560b2010fe7da6a91f3 696 Gene3D G3DSA:3.40.50.300 301 441 1.1E-49 T 11-10-2018 SYN_00609 fac156529f810560b2010fe7da6a91f3 696 Gene3D G3DSA:3.40.50.300 442 623 1.2E-48 T 11-10-2018 SYN_00609 fac156529f810560b2010fe7da6a91f3 696 SMART SM00487 36 453 1.6E-27 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain SYN_00609 fac156529f810560b2010fe7da6a91f3 696 Pfam PF12344 Ultra-violet resistance protein B 579 620 1.1E-19 T 11-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain SYN_00609 fac156529f810560b2010fe7da6a91f3 696 SMART SM00490 487 573 1.1E-16 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_00609 fac156529f810560b2010fe7da6a91f3 696 SUPERFAMILY SSF46600 643 687 7.32E-12 T 11-10-2018 IPR036876 UVR domain superfamily SYN_00609 fac156529f810560b2010fe7da6a91f3 696 SUPERFAMILY SSF52540 29 442 9.57E-139 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00609 fac156529f810560b2010fe7da6a91f3 696 Pfam PF00271 Helicase conserved C-terminal domain 465 571 2.9E-16 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_00609 fac156529f810560b2010fe7da6a91f3 696 Pfam PF02151 UvrB/uvrC motif 652 684 6.4E-10 T 11-10-2018 IPR001943 UVR domain GO:0005515 SYN_00609 fac156529f810560b2010fe7da6a91f3 696 Pfam PF04851 Type III restriction enzyme, res subunit 37 166 1.1E-11 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SYN_00609 fac156529f810560b2010fe7da6a91f3 696 SUPERFAMILY SSF52540 62 619 3.71E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00609 fac156529f810560b2010fe7da6a91f3 696 Hamap MF_00204 UvrABC system protein B [uvrB]. 30 687 43.168 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 SYN_00609 fac156529f810560b2010fe7da6a91f3 696 Gene3D G3DSA:3.40.50.300 22 266 6.9E-77 T 11-10-2018 SYN_01596 382de25573f75181ef8a9aadbae33dae 249 Pfam PF00557 Metallopeptidase family M24 11 239 2.5E-50 T 11-10-2018 IPR000994 Peptidase M24 SYN_01596 382de25573f75181ef8a9aadbae33dae 249 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 1.4E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 SYN_01596 382de25573f75181ef8a9aadbae33dae 249 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 1.4E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 SYN_01596 382de25573f75181ef8a9aadbae33dae 249 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 1.4E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 SYN_01596 382de25573f75181ef8a9aadbae33dae 249 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 1.4E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 SYN_01596 382de25573f75181ef8a9aadbae33dae 249 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 246 1.5E-98 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 SYN_01596 382de25573f75181ef8a9aadbae33dae 249 Hamap MF_01974 Methionine aminopeptidase [map]. 2 248 40.681 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 SYN_01596 382de25573f75181ef8a9aadbae33dae 249 SUPERFAMILY SSF55920 3 246 7.2E-84 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like SYN_01596 382de25573f75181ef8a9aadbae33dae 249 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 165 183 - T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 SYN_01596 382de25573f75181ef8a9aadbae33dae 249 Gene3D G3DSA:3.90.230.10 1 248 1.1E-102 T 11-10-2018 SYN_00446 ab453e88d2ba5d07bf8c1cf35fb82ce8 295 TIGRFAM TIGR01136 cysKM: cysteine synthase 7 294 9.1E-113 T 11-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 SYN_00446 ab453e88d2ba5d07bf8c1cf35fb82ce8 295 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 26 44 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 SYN_00446 ab453e88d2ba5d07bf8c1cf35fb82ce8 295 SUPERFAMILY SSF53686 3 292 4.06E-89 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme SYN_00446 ab453e88d2ba5d07bf8c1cf35fb82ce8 295 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 282 8.1E-60 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme SYN_00446 ab453e88d2ba5d07bf8c1cf35fb82ce8 295 Gene3D G3DSA:3.40.50.1100 5 291 2.8E-110 T 11-10-2018 SYN_00446 ab453e88d2ba5d07bf8c1cf35fb82ce8 295 Gene3D G3DSA:3.40.50.1100 38 136 2.8E-110 T 11-10-2018 SYN_00446 ab453e88d2ba5d07bf8c1cf35fb82ce8 295 TIGRFAM TIGR01139 cysK: cysteine synthase A 7 294 7.1E-113 T 11-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 SYN_00405 1ad01711c90eac8a4883288d82e239bd 97 SMART SM00834 1 41 4.4E-18 T 11-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain SYN_00405 1ad01711c90eac8a4883288d82e239bd 97 Pfam PF09723 Zinc ribbon domain 1 40 3.5E-15 T 11-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain SYN_00405 1ad01711c90eac8a4883288d82e239bd 97 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 51 6.5E-20 T 11-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain SYN_01765 bdd167e602c05b4644eee7d7d7ddf875 460 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 173 458 4.5E-34 T 11-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 SYN_01765 bdd167e602c05b4644eee7d7d7ddf875 460 Gene3D G3DSA:1.20.272.10 309 460 1.3E-31 T 11-10-2018 SYN_01765 bdd167e602c05b4644eee7d7d7ddf875 460 Pfam PF06144 DNA polymerase III, delta subunit 28 114 6.3E-10 T 11-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 SYN_01765 bdd167e602c05b4644eee7d7d7ddf875 460 Gene3D G3DSA:1.10.8.60 232 307 8.5E-7 T 11-10-2018 SYN_01765 bdd167e602c05b4644eee7d7d7ddf875 460 SUPERFAMILY SSF48019 312 459 5.53E-13 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 SYN_01765 bdd167e602c05b4644eee7d7d7ddf875 460 SUPERFAMILY SSF52540 16 307 6.9E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_03209 914bf4c2c1c156050f614f9c6f037d11 97 SUPERFAMILY SSF52499 2 89 3.4E-13 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 SYN_03209 914bf4c2c1c156050f614f9c6f037d11 97 Gene3D G3DSA:3.40.50.850 1 91 3.5E-11 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 SYN_03209 914bf4c2c1c156050f614f9c6f037d11 97 Pfam PF00857 Isochorismatase family 20 89 7.8E-7 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 SYN_01078 2efdffa919ae5c9e4a1ff2c9d63809c9 135 SMART SM00448 9 122 1.4E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_01078 2efdffa919ae5c9e4a1ff2c9d63809c9 135 Pfam PF00072 Response regulator receiver domain 12 122 8.7E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_01078 2efdffa919ae5c9e4a1ff2c9d63809c9 135 SUPERFAMILY SSF52172 7 127 4.98E-40 T 11-10-2018 IPR011006 CheY-like superfamily SYN_01078 2efdffa919ae5c9e4a1ff2c9d63809c9 135 Gene3D G3DSA:3.40.50.12740 8 131 6.2E-47 T 11-10-2018 SYN_02360 b5cd4027ccdb8e86d92bd7312559fdbe 435 Gene3D G3DSA:3.40.1080.10 1 188 1.4E-50 T 11-10-2018 SYN_02360 b5cd4027ccdb8e86d92bd7312559fdbe 435 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 7 184 7.2E-14 T 11-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 SYN_02360 b5cd4027ccdb8e86d92bd7312559fdbe 435 Gene3D G3DSA:3.30.750.70 191 293 1.7E-34 T 11-10-2018 SYN_02360 b5cd4027ccdb8e86d92bd7312559fdbe 435 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 276 429 1.5E-56 T 11-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain SYN_02360 b5cd4027ccdb8e86d92bd7312559fdbe 435 Gene3D G3DSA:3.40.1080.20 295 434 1.8E-52 T 11-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily SYN_02360 b5cd4027ccdb8e86d92bd7312559fdbe 435 SUPERFAMILY SSF100950 4 226 3.02E-36 T 11-10-2018 IPR037171 NagB/RpiA transferase-like SYN_02360 b5cd4027ccdb8e86d92bd7312559fdbe 435 SUPERFAMILY SSF100950 192 431 1.84E-57 T 11-10-2018 IPR037171 NagB/RpiA transferase-like SYN_01114 8d13360bd4452e2c7c6b342717be8d1e 110 Pfam PF01909 Nucleotidyltransferase domain 19 75 4.3E-12 T 11-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 SYN_01114 8d13360bd4452e2c7c6b342717be8d1e 110 SUPERFAMILY SSF81301 6 104 5.24E-17 T 11-10-2018 SYN_01114 8d13360bd4452e2c7c6b342717be8d1e 110 Gene3D G3DSA:3.30.460.10 3 102 3.7E-17 T 11-10-2018 SYN_00801 5cc9a5079dc23edb28de241b6374d824 177 SUPERFAMILY SSF53474 25 164 3.68E-20 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold SYN_00801 5cc9a5079dc23edb28de241b6374d824 177 Pfam PF00561 alpha/beta hydrolase fold 23 113 6.1E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 SYN_00801 5cc9a5079dc23edb28de241b6374d824 177 Gene3D G3DSA:3.40.50.1820 21 174 1.6E-24 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold SYN_02896 39f0fcffdde6d44b77c9b32cff4b11e2 524 Pfam PF13193 AMP-binding enzyme C-terminal domain 439 517 1.9E-19 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain SYN_02896 39f0fcffdde6d44b77c9b32cff4b11e2 524 Gene3D G3DSA:3.30.300.310 426 524 6.0E-29 T 11-10-2018 SYN_02896 39f0fcffdde6d44b77c9b32cff4b11e2 524 TIGRFAM TIGR02262 benz_CoA_lig: benzoate-CoA ligase family 10 524 6.0E-184 T 11-10-2018 IPR011957 Benzoate-CoA ligase family GO:0005524|GO:0016405 SYN_02896 39f0fcffdde6d44b77c9b32cff4b11e2 524 SUPERFAMILY SSF56801 4 524 6.41E-135 T 11-10-2018 SYN_02896 39f0fcffdde6d44b77c9b32cff4b11e2 524 Pfam PF00501 AMP-binding enzyme 24 430 3.1E-86 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 SYN_02896 39f0fcffdde6d44b77c9b32cff4b11e2 524 Gene3D G3DSA:3.40.50.12780 7 423 1.5E-108 T 11-10-2018 SYN_01129 105555682b69e6e5a8547b0f86881be2 240 Gene3D G3DSA:3.90.550.10 1 233 1.3E-60 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_01129 105555682b69e6e5a8547b0f86881be2 240 SUPERFAMILY SSF53448 1 226 6.68E-64 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_01129 105555682b69e6e5a8547b0f86881be2 240 Pfam PF00483 Nucleotidyl transferase 2 225 7.4E-39 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 SYN_01129 105555682b69e6e5a8547b0f86881be2 240 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 163 173 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 SYN_00548 875aadf1cf10e58f57f635587be3e50c 202 Hamap MF_01398 ATP synthase subunit b [atpF]. 40 180 11.819 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SYN_00548 875aadf1cf10e58f57f635587be3e50c 202 Pfam PF00430 ATP synthase B/B' CF(0) 50 178 4.6E-21 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SYN_00548 875aadf1cf10e58f57f635587be3e50c 202 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 53 198 4.9E-19 T 11-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 SYN_02553 c09cf8e1ac1280bad1114e2147ceda83 1113 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 5 1069 2.8E-289 T 11-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 SYN_02553 c09cf8e1ac1280bad1114e2147ceda83 1113 Gene3D G3DSA:1.10.10.990 849 916 3.4E-11 T 11-10-2018 SYN_02553 c09cf8e1ac1280bad1114e2147ceda83 1113 Gene3D G3DSA:1.10.486.10 440 649 2.3E-168 T 11-10-2018 SYN_02553 c09cf8e1ac1280bad1114e2147ceda83 1113 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 3 1106 20.159 T 11-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 SYN_02553 c09cf8e1ac1280bad1114e2147ceda83 1113 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 4 782 2.7E-274 T 11-10-2018 SYN_02553 c09cf8e1ac1280bad1114e2147ceda83 1113 SUPERFAMILY SSF52980 807 1102 6.97E-78 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 SYN_02553 c09cf8e1ac1280bad1114e2147ceda83 1113 Gene3D G3DSA:1.10.10.160 80 184 1.7E-84 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily SYN_02553 c09cf8e1ac1280bad1114e2147ceda83 1113 SUPERFAMILY SSF52540 3 330 4.96E-96 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02553 c09cf8e1ac1280bad1114e2147ceda83 1113 SUPERFAMILY SSF52540 346 788 2.97E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02553 c09cf8e1ac1280bad1114e2147ceda83 1113 Gene3D G3DSA:3.40.50.10930 6 299 1.7E-84 T 11-10-2018 SYN_02553 c09cf8e1ac1280bad1114e2147ceda83 1113 Gene3D G3DSA:3.40.50.300 318 783 2.3E-168 T 11-10-2018 SYN_02553 c09cf8e1ac1280bad1114e2147ceda83 1113 PIRSF PIRSF000980 3 1112 0.0 T 11-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 SYN_03163 ce579d8a503bc75adc0681e6d214dd97 274 TIGRFAM TIGR02177 PorB_KorB: 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family 8 245 5.2E-99 T 11-10-2018 IPR011896 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate SYN_03163 ce579d8a503bc75adc0681e6d214dd97 274 SUPERFAMILY SSF52518 7 253 8.06E-69 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold SYN_03163 ce579d8a503bc75adc0681e6d214dd97 274 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 46 189 4.5E-29 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SYN_03163 ce579d8a503bc75adc0681e6d214dd97 274 Gene3D G3DSA:3.40.50.970 21 219 1.1E-26 T 11-10-2018 SYN_03163 ce579d8a503bc75adc0681e6d214dd97 274 Pfam PF12367 Pyruvate ferredoxin oxidoreductase beta subunit C terminal 193 246 9.0E-16 T 11-10-2018 IPR032686 Pyruvate ferredoxin oxidoreductase beta subunit, C-terminal SYN_01647 3c9e07f4f213e1ab21a1d2484bc2a96d 150 Gene3D G3DSA:3.40.30.10 67 149 1.4E-29 T 11-10-2018 SYN_01647 3c9e07f4f213e1ab21a1d2484bc2a96d 150 Gene3D G3DSA:1.10.10.1590 1 66 9.1E-13 T 11-10-2018 SYN_01647 3c9e07f4f213e1ab21a1d2484bc2a96d 150 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 107 125 - T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_01647 3c9e07f4f213e1ab21a1d2484bc2a96d 150 PIRSF PIRSF000216 1 150 4.5E-48 T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_01647 3c9e07f4f213e1ab21a1d2484bc2a96d 150 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 6 149 1.8E-49 T 11-10-2018 SYN_01647 3c9e07f4f213e1ab21a1d2484bc2a96d 150 SUPERFAMILY SSF52833 4 149 2.46E-47 T 11-10-2018 IPR036249 Thioredoxin-like superfamily SYN_00178 bcb3ae8088eb357da8551f0ec6782b43 525 Gene3D G3DSA:3.40.50.300 39 242 3.3E-63 T 11-10-2018 SYN_00178 bcb3ae8088eb357da8551f0ec6782b43 525 SUPERFAMILY SSF52540 107 389 2.6E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00178 bcb3ae8088eb357da8551f0ec6782b43 525 Pfam PF00270 DEAD/DEAH box helicase 63 225 7.4E-42 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SYN_00178 bcb3ae8088eb357da8551f0ec6782b43 525 SMART SM00487 57 249 6.6E-52 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain SYN_00178 bcb3ae8088eb357da8551f0ec6782b43 525 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 185 193 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SYN_00178 bcb3ae8088eb357da8551f0ec6782b43 525 Gene3D G3DSA:3.40.50.300 262 465 3.6E-49 T 11-10-2018 SYN_00178 bcb3ae8088eb357da8551f0ec6782b43 525 SMART SM00490 290 371 3.2E-30 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_00178 bcb3ae8088eb357da8551f0ec6782b43 525 Pfam PF00271 Helicase conserved C-terminal domain 266 371 7.7E-29 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_01773 8b3e44f89814cb9d19709cae3c2eeaec 165 Pfam PF04351 Pilus assembly protein, PilP 43 161 9.6E-13 T 11-10-2018 IPR007446 Pilus assembly protein PilP SYN_01773 8b3e44f89814cb9d19709cae3c2eeaec 165 Gene3D G3DSA:2.30.30.830 83 162 3.5E-11 T 11-10-2018 SYN_02612 95479877c4dc9ee1a24f0ab65902b434 270 Pfam PF07313 Protein of unknown function (DUF1460) 46 264 4.6E-59 T 11-10-2018 IPR010846 Protein of unknown function DUF1460 SYN_02612 95479877c4dc9ee1a24f0ab65902b434 270 Gene3D G3DSA:2.30.260.10 138 267 2.4E-70 T 11-10-2018 SYN_02612 95479877c4dc9ee1a24f0ab65902b434 270 SUPERFAMILY SSF54001 14 270 4.12E-68 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily SYN_02612 95479877c4dc9ee1a24f0ab65902b434 270 Gene3D G3DSA:1.10.3670.10 49 184 2.4E-70 T 11-10-2018 SYN_02637 9c9a2211604454eca3ad0e5d3857732a 325 SMART SM00893 5 189 1.1E-51 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 SYN_02637 9c9a2211604454eca3ad0e5d3857732a 325 Gene3D G3DSA:3.40.50.620 1 197 2.4E-65 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_02637 9c9a2211604454eca3ad0e5d3857732a 325 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 264 290 - T 11-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 SYN_02637 9c9a2211604454eca3ad0e5d3857732a 325 Gene3D G3DSA:3.40.50.1220 198 324 1.2E-56 T 11-10-2018 SYN_02637 9c9a2211604454eca3ad0e5d3857732a 325 SUPERFAMILY SSF52402 3 194 4.47E-54 T 11-10-2018 SYN_02637 9c9a2211604454eca3ad0e5d3857732a 325 Pfam PF01012 Electron transfer flavoprotein domain 5 178 2.5E-49 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 SYN_02637 9c9a2211604454eca3ad0e5d3857732a 325 SUPERFAMILY SSF52467 200 318 3.05E-46 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily SYN_02637 9c9a2211604454eca3ad0e5d3857732a 325 PIRSF PIRSF000089 1 324 3.7E-114 T 11-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 SYN_02637 9c9a2211604454eca3ad0e5d3857732a 325 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 201 283 5.0E-35 T 11-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 SYN_02855 334c3923657f6027606e0d3edcf94de5 510 Pfam PF13598 Domain of unknown function (DUF4139) 214 499 5.6E-36 T 11-10-2018 IPR037291 Domain of unknown function DUF4139 SYN_02855 334c3923657f6027606e0d3edcf94de5 510 Pfam PF13600 N-terminal domain of unknown function (DUF4140) 34 132 1.4E-8 T 11-10-2018 IPR025554 Domain of unknown function DUF4140 SYN_01681 b88ea27b85d03430764be5194838cc6d 388 PIRSF PIRSF000429 1 384 3.0E-49 T 11-10-2018 IPR002155 Thiolase GO:0016747 SYN_01681 b88ea27b85d03430764be5194838cc6d 388 SUPERFAMILY SSF53901 5 358 1.44E-39 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 SYN_01681 b88ea27b85d03430764be5194838cc6d 388 Gene3D G3DSA:3.40.47.10 1 388 3.2E-112 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 SYN_01681 b88ea27b85d03430764be5194838cc6d 388 Pfam PF00108 Thiolase, N-terminal domain 21 153 4.8E-11 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 SYN_01681 b88ea27b85d03430764be5194838cc6d 388 ProSitePatterns PS00737 Thiolases signature 2. 326 342 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 SYN_01681 b88ea27b85d03430764be5194838cc6d 388 Pfam PF02803 Thiolase, C-terminal domain 263 361 8.8E-12 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 SYN_00188 51030eee2f6eb66bc0d0af5122db30ff 496 Gene3D G3DSA:3.40.50.10070 75 223 2.4E-16 T 11-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 SYN_00188 51030eee2f6eb66bc0d0af5122db30ff 496 SUPERFAMILY SSF52964 83 220 2.62E-21 T 11-10-2018 SYN_00188 51030eee2f6eb66bc0d0af5122db30ff 496 Gene3D G3DSA:2.120.10.30 224 415 3.4E-62 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like SYN_00188 51030eee2f6eb66bc0d0af5122db30ff 496 Gene3D G3DSA:2.120.10.60 416 490 3.6E-6 T 11-10-2018 SYN_00188 51030eee2f6eb66bc0d0af5122db30ff 496 Pfam PF07676 WD40-like Beta Propeller Repeat 341 376 2.3E-12 T 11-10-2018 IPR011659 WD40-like Beta Propeller SYN_00188 51030eee2f6eb66bc0d0af5122db30ff 496 Pfam PF07676 WD40-like Beta Propeller Repeat 298 332 0.23 T 11-10-2018 IPR011659 WD40-like Beta Propeller SYN_00188 51030eee2f6eb66bc0d0af5122db30ff 496 Pfam PF07676 WD40-like Beta Propeller Repeat 429 462 2.8E-7 T 11-10-2018 IPR011659 WD40-like Beta Propeller SYN_00188 51030eee2f6eb66bc0d0af5122db30ff 496 Pfam PF07676 WD40-like Beta Propeller Repeat 264 288 1.9E-10 T 11-10-2018 IPR011659 WD40-like Beta Propeller SYN_00188 51030eee2f6eb66bc0d0af5122db30ff 496 Pfam PF07676 WD40-like Beta Propeller Repeat 385 419 1.5E-4 T 11-10-2018 IPR011659 WD40-like Beta Propeller SYN_00188 51030eee2f6eb66bc0d0af5122db30ff 496 SUPERFAMILY SSF69304 221 489 4.18E-56 T 11-10-2018 SYN_00188 51030eee2f6eb66bc0d0af5122db30ff 496 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 71 488 1.0E-112 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 SYN_00188 51030eee2f6eb66bc0d0af5122db30ff 496 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 58 487 47.154 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 SYN_00188 51030eee2f6eb66bc0d0af5122db30ff 496 Pfam PF04052 TolB amino-terminal domain 78 188 6.1E-17 T 11-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 SYN_00231 7aa6fddbd5b44da3366904435d966cea 839 SUPERFAMILY SSF53756 27 836 0.0 T 11-10-2018 SYN_00231 7aa6fddbd5b44da3366904435d966cea 839 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 676 688 - T 11-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 SYN_00231 7aa6fddbd5b44da3366904435d966cea 839 Gene3D G3DSA:3.40.50.2000 21 492 1.4E-198 T 11-10-2018 SYN_00231 7aa6fddbd5b44da3366904435d966cea 839 PIRSF PIRSF000460 16 838 3.9E-221 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 SYN_00231 7aa6fddbd5b44da3366904435d966cea 839 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 31 832 0.0 T 11-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 SYN_00231 7aa6fddbd5b44da3366904435d966cea 839 Pfam PF00343 Carbohydrate phosphorylase 120 832 0.0 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 SYN_00231 7aa6fddbd5b44da3366904435d966cea 839 Gene3D G3DSA:3.40.50.2000 493 818 9.8E-145 T 11-10-2018 SYN_01581 f09172a268b3eba57c7b0fc9e98c02f7 335 Gene3D G3DSA:3.60.10.10 47 320 1.7E-77 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily SYN_01581 f09172a268b3eba57c7b0fc9e98c02f7 335 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 52 307 4.7E-12 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase SYN_01581 f09172a268b3eba57c7b0fc9e98c02f7 335 SUPERFAMILY SSF56219 48 312 7.33E-40 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily SYN_01394 19d966ba3beb272c0f68913e1081f392 287 Pfam PF04321 RmlD substrate binding domain 1 278 3.2E-91 T 11-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 SYN_01394 19d966ba3beb272c0f68913e1081f392 287 Gene3D G3DSA:3.90.25.10 158 272 1.8E-98 T 11-10-2018 SYN_01394 19d966ba3beb272c0f68913e1081f392 287 SUPERFAMILY SSF51735 1 278 3.72E-89 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_01394 19d966ba3beb272c0f68913e1081f392 287 Gene3D G3DSA:3.40.50.720 3 266 1.8E-98 T 11-10-2018 SYN_01394 19d966ba3beb272c0f68913e1081f392 287 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 277 7.5E-88 T 11-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 SYN_02797 a7ec23e86e285b5071cf252c07ee03a9 394 Pfam PF14520 Helix-hairpin-helix domain 12 59 1.2E-7 T 11-10-2018 SYN_02797 a7ec23e86e285b5071cf252c07ee03a9 394 Gene3D G3DSA:3.40.50.450 1 290 1.2E-107 T 11-10-2018 SYN_02797 a7ec23e86e285b5071cf252c07ee03a9 394 SMART SM00278 42 61 4.8E-4 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SYN_02797 a7ec23e86e285b5071cf252c07ee03a9 394 Pfam PF02481 DNA recombination-mediator protein A 74 279 1.7E-80 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 SYN_02797 a7ec23e86e285b5071cf252c07ee03a9 394 SUPERFAMILY SSF47781 4 62 5.34E-11 T 11-10-2018 IPR010994 RuvA domain 2-like SYN_02797 a7ec23e86e285b5071cf252c07ee03a9 394 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 72 287 9.2E-79 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 SYN_02797 a7ec23e86e285b5071cf252c07ee03a9 394 SUPERFAMILY SSF102405 83 288 7.48E-45 T 11-10-2018 SYN_02797 a7ec23e86e285b5071cf252c07ee03a9 394 Gene3D G3DSA:1.10.10.10 307 385 4.3E-5 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_02149 ddacd9e46785de2ca8c677f6ca656cc3 461 Pfam PF04055 Radical SAM superfamily 166 337 1.9E-31 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_02149 ddacd9e46785de2ca8c677f6ca656cc3 461 Pfam PF01938 TRAM domain 392 453 1.0E-11 T 11-10-2018 IPR002792 TRAM domain SYN_02149 ddacd9e46785de2ca8c677f6ca656cc3 461 SUPERFAMILY SSF102114 157 385 7.59E-61 T 11-10-2018 SYN_02149 ddacd9e46785de2ca8c677f6ca656cc3 461 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 20 450 2.7E-150 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 SYN_02149 ddacd9e46785de2ca8c677f6ca656cc3 461 SMART SM00729 162 380 2.1E-57 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SYN_02149 ddacd9e46785de2ca8c677f6ca656cc3 461 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 20 452 1.6E-166 T 11-10-2018 SYN_02149 ddacd9e46785de2ca8c677f6ca656cc3 461 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 18 454 72.859 T 11-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 SYN_02149 ddacd9e46785de2ca8c677f6ca656cc3 461 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 166 186 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 SYN_02149 ddacd9e46785de2ca8c677f6ca656cc3 461 Gene3D G3DSA:3.40.50.12160 18 148 4.7E-37 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily SYN_02149 ddacd9e46785de2ca8c677f6ca656cc3 461 Gene3D G3DSA:3.80.30.20 161 393 2.5E-91 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe SYN_02149 ddacd9e46785de2ca8c677f6ca656cc3 461 Pfam PF00919 Uncharacterized protein family UPF0004 20 118 6.5E-30 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 SYN_01248 a7e2997c850406f905c0080a7895e8d8 118 Gene3D G3DSA:1.10.3730.20 12 118 5.0E-33 T 11-10-2018 SYN_01248 a7e2997c850406f905c0080a7895e8d8 118 SUPERFAMILY SSF103481 18 115 8.63E-21 T 11-10-2018 SYN_01248 a7e2997c850406f905c0080a7895e8d8 118 Pfam PF00893 Small Multidrug Resistance protein 13 105 3.5E-29 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 SYN_02937 7d265663e885d7e1e0f40bb8950bbbe8 395 SUPERFAMILY SSF53383 17 392 3.09E-89 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SYN_02937 7d265663e885d7e1e0f40bb8950bbbe8 395 Gene3D G3DSA:3.90.1150.10 16 375 5.0E-131 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SYN_02937 7d265663e885d7e1e0f40bb8950bbbe8 395 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 99 119 6.5E-12 T 11-10-2018 SYN_02937 7d265663e885d7e1e0f40bb8950bbbe8 395 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 121 142 6.5E-12 T 11-10-2018 SYN_02937 7d265663e885d7e1e0f40bb8950bbbe8 395 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 166 190 6.5E-12 T 11-10-2018 SYN_02937 7d265663e885d7e1e0f40bb8950bbbe8 395 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 235 259 6.5E-12 T 11-10-2018 SYN_02937 7d265663e885d7e1e0f40bb8950bbbe8 395 Gene3D G3DSA:3.40.640.10 69 299 5.0E-131 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SYN_02937 7d265663e885d7e1e0f40bb8950bbbe8 395 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 241 254 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 SYN_02937 7d265663e885d7e1e0f40bb8950bbbe8 395 Pfam PF00155 Aminotransferase class I and II 37 382 6.9E-49 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SYN_02229 a53d413f03167e38d4576cbd5643f770 89 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 3 89 1.5E-32 T 11-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin SYN_02229 a53d413f03167e38d4576cbd5643f770 89 SUPERFAMILY SSF143011 1 88 8.63E-27 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily SYN_02229 a53d413f03167e38d4576cbd5643f770 89 Gene3D G3DSA:3.30.2310.20 1 89 8.5E-32 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily SYN_02229 a53d413f03167e38d4576cbd5643f770 89 PIRSF PIRSF006156 1 89 1.0E-26 T 11-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin SYN_02229 a53d413f03167e38d4576cbd5643f770 89 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 5 88 2.8E-23 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family SYN_01338 5c8e903e1f2ee45394b5acb0dd1b984e 239 Pfam PF00156 Phosphoribosyl transferase domain 145 237 8.5E-8 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 SYN_01338 5c8e903e1f2ee45394b5acb0dd1b984e 239 SUPERFAMILY SSF53271 61 237 1.84E-32 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like SYN_01338 5c8e903e1f2ee45394b5acb0dd1b984e 239 Gene3D G3DSA:3.40.50.2020 120 239 2.6E-18 T 11-10-2018 SYN_00731 a18f076630f8308a17e7fce574d7075e 433 Gene3D G3DSA:1.10.8.260 287 351 7.4E-125 T 11-10-2018 IPR023166 HI0933-like insert domain superfamily SYN_00731 a18f076630f8308a17e7fce574d7075e 433 Gene3D G3DSA:2.40.30.10 205 368 7.4E-125 T 11-10-2018 SYN_00731 a18f076630f8308a17e7fce574d7075e 433 SUPERFAMILY SSF51905 10 423 1.36E-54 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_00731 a18f076630f8308a17e7fce574d7075e 433 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 15 420 1.1E-151 T 11-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like SYN_00731 a18f076630f8308a17e7fce574d7075e 433 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 14 36 2.0E-8 T 11-10-2018 SYN_00731 a18f076630f8308a17e7fce574d7075e 433 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 181 2.0E-8 T 11-10-2018 SYN_00731 a18f076630f8308a17e7fce574d7075e 433 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 15 34 2.4E-5 T 11-10-2018 SYN_00731 a18f076630f8308a17e7fce574d7075e 433 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 2.4E-5 T 11-10-2018 SYN_00731 a18f076630f8308a17e7fce574d7075e 433 SUPERFAMILY SSF160996 206 369 6.41E-47 T 11-10-2018 SYN_00731 a18f076630f8308a17e7fce574d7075e 433 Pfam PF03486 HI0933-like protein 13 421 7.8E-132 T 11-10-2018 SYN_00731 a18f076630f8308a17e7fce574d7075e 433 Gene3D G3DSA:3.50.50.60 16 417 7.4E-125 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_01799 635db59b9d9f4b3ccebbe2186e7cb483 282 SUPERFAMILY SSF64438 12 266 6.04E-79 T 11-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic SYN_01799 635db59b9d9f4b3ccebbe2186e7cb483 282 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 35 265 4.0E-55 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase SYN_01799 635db59b9d9f4b3ccebbe2186e7cb483 282 Gene3D G3DSA:3.60.140.10 2 269 3.1E-87 T 11-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily SYN_01799 635db59b9d9f4b3ccebbe2186e7cb483 282 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 30 263 1.1E-73 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase SYN_01033 3bada51587f5cca02cecfa8d010b145c 134 Gene3D G3DSA:3.10.50.30 44 134 7.4E-34 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 SYN_01033 3bada51587f5cca02cecfa8d010b145c 134 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 48 124 2.2E-23 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SYN_01033 3bada51587f5cca02cecfa8d010b145c 134 SUPERFAMILY SSF54534 47 125 1.7E-20 T 11-10-2018 SYN_01033 3bada51587f5cca02cecfa8d010b145c 134 Pfam PF14760 Rnk N-terminus 4 42 1.5E-12 T 11-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain SYN_01033 3bada51587f5cca02cecfa8d010b145c 134 PIRSF PIRSF006092 1 30 3.5 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 SYN_01033 3bada51587f5cca02cecfa8d010b145c 134 PIRSF PIRSF006092 20 126 1.4E-27 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 SYN_00198 e965f405b36540df3c144c324d5bd7b9 435 Gene3D G3DSA:3.40.50.410 47 227 2.9E-10 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily SYN_00198 e965f405b36540df3c144c324d5bd7b9 435 Gene3D G3DSA:4.10.1080.10 228 308 1.3E-6 T 11-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 SYN_00198 e965f405b36540df3c144c324d5bd7b9 435 SUPERFAMILY SSF103088 322 433 6.54E-37 T 11-10-2018 IPR036737 OmpA-like domain superfamily SYN_00198 e965f405b36540df3c144c324d5bd7b9 435 Gene3D G3DSA:3.30.1330.60 309 435 2.1E-41 T 11-10-2018 IPR036737 OmpA-like domain superfamily SYN_00198 e965f405b36540df3c144c324d5bd7b9 435 PRINTS PR01021 OMPA domain signature 333 355 8.6E-12 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SYN_00198 e965f405b36540df3c144c324d5bd7b9 435 PRINTS PR01021 OMPA domain signature 378 394 8.6E-12 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SYN_00198 e965f405b36540df3c144c324d5bd7b9 435 PRINTS PR01021 OMPA domain signature 363 378 8.6E-12 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SYN_00198 e965f405b36540df3c144c324d5bd7b9 435 SUPERFAMILY SSF53300 50 196 3.2E-6 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily SYN_00198 e965f405b36540df3c144c324d5bd7b9 435 Pfam PF00691 OmpA family 332 428 2.3E-25 T 11-10-2018 IPR006665 OmpA-like domain SYN_00198 e965f405b36540df3c144c324d5bd7b9 435 SUPERFAMILY SSF103647 244 307 7.98E-16 T 11-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 SYN_00265 6474b05bfb3bdc48eac00ee3d703c1b4 459 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 211 218 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 SYN_00265 6474b05bfb3bdc48eac00ee3d703c1b4 459 Gene3D G3DSA:3.40.309.10 215 410 5.0E-174 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 SYN_00265 6474b05bfb3bdc48eac00ee3d703c1b4 459 Pfam PF00171 Aldehyde dehydrogenase family 4 430 8.4E-92 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 SYN_00265 6474b05bfb3bdc48eac00ee3d703c1b4 459 PIRSF PIRSF036492 1 459 8.3E-182 T 11-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 SYN_00265 6474b05bfb3bdc48eac00ee3d703c1b4 459 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 239 250 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 SYN_00265 6474b05bfb3bdc48eac00ee3d703c1b4 459 SUPERFAMILY SSF53720 4 431 9.56E-121 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 SYN_00265 6474b05bfb3bdc48eac00ee3d703c1b4 459 Gene3D G3DSA:3.40.605.10 15 430 5.0E-174 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 SYN_01532 d5ce88c65f4795fb72ad0a0da316a1bc 320 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 65 84 7.1E-20 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SYN_01532 d5ce88c65f4795fb72ad0a0da316a1bc 320 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 281 304 7.1E-20 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SYN_01532 d5ce88c65f4795fb72ad0a0da316a1bc 320 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 149 160 7.1E-20 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SYN_01532 d5ce88c65f4795fb72ad0a0da316a1bc 320 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 269 278 7.1E-20 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SYN_01532 d5ce88c65f4795fb72ad0a0da316a1bc 320 Gene3D G3DSA:3.40.50.1370 149 295 2.2E-96 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 SYN_01532 d5ce88c65f4795fb72ad0a0da316a1bc 320 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 19 315 3.8E-98 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 SYN_01532 d5ce88c65f4795fb72ad0a0da316a1bc 320 SUPERFAMILY SSF53671 14 317 3.93E-96 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 SYN_01532 d5ce88c65f4795fb72ad0a0da316a1bc 320 Gene3D G3DSA:3.40.50.1370 24 311 2.2E-96 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 SYN_01532 d5ce88c65f4795fb72ad0a0da316a1bc 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 93 102 2.0E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 SYN_01532 d5ce88c65f4795fb72ad0a0da316a1bc 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 297 311 2.0E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 SYN_01532 d5ce88c65f4795fb72ad0a0da316a1bc 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 232 241 2.0E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 SYN_01532 d5ce88c65f4795fb72ad0a0da316a1bc 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 55 77 2.0E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 SYN_01532 d5ce88c65f4795fb72ad0a0da316a1bc 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 148 165 2.0E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 SYN_01532 d5ce88c65f4795fb72ad0a0da316a1bc 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 273 278 2.0E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 SYN_01532 d5ce88c65f4795fb72ad0a0da316a1bc 320 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 19 161 1.1E-41 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 SYN_01532 d5ce88c65f4795fb72ad0a0da316a1bc 320 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 169 315 4.7E-29 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 SYN_01532 d5ce88c65f4795fb72ad0a0da316a1bc 320 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 65 72 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SYN_01532 d5ce88c65f4795fb72ad0a0da316a1bc 320 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 18 318 39.906 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 SYN_00211 9210ed16f7a99466b6790c19338404fe 333 Pfam PF08279 HTH domain 10 63 1.6E-14 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 SYN_00211 9210ed16f7a99466b6790c19338404fe 333 Gene3D G3DSA:2.30.30.100 285 331 1.1E-8 T 11-10-2018 SYN_00211 9210ed16f7a99466b6790c19338404fe 333 Pfam PF02237 Biotin protein ligase C terminal domain 286 329 9.6E-6 T 11-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SYN_00211 9210ed16f7a99466b6790c19338404fe 333 Pfam PF03099 Biotin/lipoate A/B protein ligase family 94 219 6.7E-17 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 SYN_00211 9210ed16f7a99466b6790c19338404fe 333 Gene3D G3DSA:1.10.10.10 3 69 3.4E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_00211 9210ed16f7a99466b6790c19338404fe 333 SUPERFAMILY SSF46785 10 65 3.87E-8 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_00211 9210ed16f7a99466b6790c19338404fe 333 SUPERFAMILY SSF55681 89 279 3.11E-56 T 11-10-2018 SYN_00211 9210ed16f7a99466b6790c19338404fe 333 Gene3D G3DSA:3.30.930.10 85 282 4.7E-62 T 11-10-2018 SYN_00211 9210ed16f7a99466b6790c19338404fe 333 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 92 330 3.4E-56 T 11-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SYN_00211 9210ed16f7a99466b6790c19338404fe 333 SUPERFAMILY SSF50037 287 330 3.94E-7 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal SYN_00211 9210ed16f7a99466b6790c19338404fe 333 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 12 331 36.242 T 11-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 SYN_01167 c5bb0c0eabb1cae8a1adb179513c198e 476 SUPERFAMILY SSF55103 286 472 8.24E-18 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 SYN_01167 c5bb0c0eabb1cae8a1adb179513c198e 476 Gene3D G3DSA:1.10.45.10 438 471 6.5E-7 T 11-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 SYN_01167 c5bb0c0eabb1cae8a1adb179513c198e 476 Gene3D G3DSA:3.30.465.40 15 252 1.3E-51 T 11-10-2018 SYN_01167 c5bb0c0eabb1cae8a1adb179513c198e 476 Pfam PF02913 FAD linked oxidases, C-terminal domain 358 471 7.6E-9 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 SYN_01167 c5bb0c0eabb1cae8a1adb179513c198e 476 SUPERFAMILY SSF56176 13 235 6.54E-47 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 SYN_01167 c5bb0c0eabb1cae8a1adb179513c198e 476 Pfam PF01565 FAD binding domain 54 193 5.9E-33 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 SYN_02266 b4af13ae5e92ab5ac8a8d0bd18b19d1f 369 Gene3D G3DSA:3.20.20.70 6 313 3.2E-54 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_02266 b4af13ae5e92ab5ac8a8d0bd18b19d1f 369 Pfam PF13353 4Fe-4S single cluster domain 11 124 1.8E-8 T 11-10-2018 SYN_02266 b4af13ae5e92ab5ac8a8d0bd18b19d1f 369 SMART SM00729 11 211 0.0084 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SYN_02266 b4af13ae5e92ab5ac8a8d0bd18b19d1f 369 Pfam PF04055 Radical SAM superfamily 16 154 8.6E-20 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_02266 b4af13ae5e92ab5ac8a8d0bd18b19d1f 369 SUPERFAMILY SSF102114 12 327 9.03E-71 T 11-10-2018 SYN_02266 b4af13ae5e92ab5ac8a8d0bd18b19d1f 369 TIGRFAM TIGR04545 rSAM_ahbD_hemeb: heme b synthase 12 350 6.2E-193 T 11-10-2018 IPR030896 Heme b synthase SYN_02266 b4af13ae5e92ab5ac8a8d0bd18b19d1f 369 Pfam PF13186 Iron-sulfur cluster-binding domain 260 320 5.7E-7 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain SYN_02266 b4af13ae5e92ab5ac8a8d0bd18b19d1f 369 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 260 346 3.8E-11 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain SYN_02266 b4af13ae5e92ab5ac8a8d0bd18b19d1f 369 PIRSF PIRSF037420 3 364 1.2E-104 T 11-10-2018 IPR017200 Coenzyme PQQ synthesis protein E SYN_01595 c72ad760ee7c56eba33c2602ce433d62 435 Gene3D G3DSA:1.10.3370.10 1 422 6.6E-173 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 SYN_01595 c72ad760ee7c56eba33c2602ce433d62 435 Pfam PF00344 SecY translocase 71 409 1.7E-122 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 SYN_01595 c72ad760ee7c56eba33c2602ce433d62 435 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 16 422 3.1E-125 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 SYN_01595 c72ad760ee7c56eba33c2602ce433d62 435 ProSitePatterns PS00755 Protein secY signature 1. 71 90 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 SYN_01595 c72ad760ee7c56eba33c2602ce433d62 435 ProSitePatterns PS00756 Protein secY signature 2. 170 187 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 SYN_01595 c72ad760ee7c56eba33c2602ce433d62 435 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 3.4E-93 T 11-10-2018 SYN_01595 c72ad760ee7c56eba33c2602ce433d62 435 PRINTS PR00303 Preprotein translocase SecY subunit signature 177 200 3.4E-93 T 11-10-2018 SYN_01595 c72ad760ee7c56eba33c2602ce433d62 435 PRINTS PR00303 Preprotein translocase SecY subunit signature 151 176 3.4E-93 T 11-10-2018 SYN_01595 c72ad760ee7c56eba33c2602ce433d62 435 PRINTS PR00303 Preprotein translocase SecY subunit signature 269 288 3.4E-93 T 11-10-2018 SYN_01595 c72ad760ee7c56eba33c2602ce433d62 435 PRINTS PR00303 Preprotein translocase SecY subunit signature 363 381 3.4E-93 T 11-10-2018 SYN_01595 c72ad760ee7c56eba33c2602ce433d62 435 PRINTS PR00303 Preprotein translocase SecY subunit signature 308 330 3.4E-93 T 11-10-2018 SYN_01595 c72ad760ee7c56eba33c2602ce433d62 435 PRINTS PR00303 Preprotein translocase SecY subunit signature 395 413 3.4E-93 T 11-10-2018 SYN_01595 c72ad760ee7c56eba33c2602ce433d62 435 PRINTS PR00303 Preprotein translocase SecY subunit signature 70 90 3.4E-93 T 11-10-2018 SYN_01595 c72ad760ee7c56eba33c2602ce433d62 435 PRINTS PR00303 Preprotein translocase SecY subunit signature 111 134 3.4E-93 T 11-10-2018 SYN_01595 c72ad760ee7c56eba33c2602ce433d62 435 SUPERFAMILY SSF103491 3 417 5.36E-130 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 SYN_01595 c72ad760ee7c56eba33c2602ce433d62 435 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 426 30.946 T 11-10-2018 IPR026593 Protein translocase subunit SecY SYN_01595 c72ad760ee7c56eba33c2602ce433d62 435 PIRSF PIRSF004557 1 432 5.0E-124 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 SYN_00823 1eaa4fcd15876a9c7f4e096805b78880 406 Gene3D G3DSA:3.40.50.2000 5 218 3.1E-19 T 11-10-2018 SYN_00823 1eaa4fcd15876a9c7f4e096805b78880 406 Pfam PF13439 Glycosyltransferase Family 4 20 203 3.7E-13 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 SYN_00823 1eaa4fcd15876a9c7f4e096805b78880 406 Gene3D G3DSA:3.40.50.2000 219 384 1.6E-40 T 11-10-2018 SYN_00823 1eaa4fcd15876a9c7f4e096805b78880 406 Pfam PF00534 Glycosyl transferases group 1 220 376 5.7E-34 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 SYN_00823 1eaa4fcd15876a9c7f4e096805b78880 406 SUPERFAMILY SSF53756 9 402 1.66E-68 T 11-10-2018 SYN_01525 48137e6278116be3a2fbc28d5e6d9ded 302 SUPERFAMILY SSF82866 116 295 1.44E-40 T 11-10-2018 SYN_01525 48137e6278116be3a2fbc28d5e6d9ded 302 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 295 29.075 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 SYN_01525 48137e6278116be3a2fbc28d5e6d9ded 302 Pfam PF02355 Protein export membrane protein 113 292 3.3E-70 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial SYN_01525 48137e6278116be3a2fbc28d5e6d9ded 302 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 284 8.9E-85 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 SYN_01525 48137e6278116be3a2fbc28d5e6d9ded 302 PRINTS PR01755 Bacterial translocase SecF protein signature 200 218 7.0E-31 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SYN_01525 48137e6278116be3a2fbc28d5e6d9ded 302 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 7.0E-31 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SYN_01525 48137e6278116be3a2fbc28d5e6d9ded 302 PRINTS PR01755 Bacterial translocase SecF protein signature 232 247 7.0E-31 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SYN_01525 48137e6278116be3a2fbc28d5e6d9ded 302 PRINTS PR01755 Bacterial translocase SecF protein signature 152 166 7.0E-31 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SYN_01525 48137e6278116be3a2fbc28d5e6d9ded 302 Gene3D G3DSA:1.20.1640.10 103 298 9.5E-13 T 11-10-2018 SYN_01525 48137e6278116be3a2fbc28d5e6d9ded 302 Pfam PF07549 SecD/SecF GG Motif 39 59 5.1E-9 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site SYN_01525 48137e6278116be3a2fbc28d5e6d9ded 302 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 102 281 3.4E-58 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SYN_01320 5f254a87e298e6cbd5c9bea72ad493fa 89 Pfam PF06794 Uncharacterised protein family (UPF0270) 13 78 1.8E-28 T 11-10-2018 IPR010648 Uncharacterised protein family UPF0270 SYN_01320 5f254a87e298e6cbd5c9bea72ad493fa 89 Gene3D G3DSA:1.10.10.610 9 84 1.6E-28 T 11-10-2018 IPR036685 YehU-like superfamily SYN_01320 5f254a87e298e6cbd5c9bea72ad493fa 89 SUPERFAMILY SSF118001 11 79 2.09E-26 T 11-10-2018 IPR036685 YehU-like superfamily SYN_01320 5f254a87e298e6cbd5c9bea72ad493fa 89 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 11 77 1.0E-13 T 11-10-2018 IPR010648 Uncharacterised protein family UPF0270 SYN_01320 5f254a87e298e6cbd5c9bea72ad493fa 89 PIRSF PIRSF006169 11 84 2.2E-26 T 11-10-2018 IPR010648 Uncharacterised protein family UPF0270 SYN_02790 6f4a161acd46fa3817763bdf1e9c5b84 279 Pfam PF00472 RF-1 domain 144 253 9.9E-44 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SYN_02790 6f4a161acd46fa3817763bdf1e9c5b84 279 Pfam PF03462 PCRF domain 6 135 2.3E-47 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 SYN_02790 6f4a161acd46fa3817763bdf1e9c5b84 279 SMART SM00937 1 110 4.3E-49 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 SYN_02790 6f4a161acd46fa3817763bdf1e9c5b84 279 Gene3D G3DSA:3.30.160.20 141 236 7.3E-99 T 11-10-2018 SYN_02790 6f4a161acd46fa3817763bdf1e9c5b84 279 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 279 31.625 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 SYN_02790 6f4a161acd46fa3817763bdf1e9c5b84 279 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 160 176 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SYN_02790 6f4a161acd46fa3817763bdf1e9c5b84 279 SUPERFAMILY SSF75620 2 278 1.31E-122 T 11-10-2018 SYN_02790 6f4a161acd46fa3817763bdf1e9c5b84 279 Gene3D G3DSA:3.30.70.1660 45 274 7.3E-99 T 11-10-2018 SYN_02790 6f4a161acd46fa3817763bdf1e9c5b84 279 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 277 1.7E-142 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 SYN_00448 53b4ea0645d88d446b9aff96f5e507eb 717 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 642 675 - T 11-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 SYN_00448 53b4ea0645d88d446b9aff96f5e507eb 717 Pfam PF03958 Bacterial type II/III secretion system short domain 370 463 8.7E-10 T 11-10-2018 IPR005644 NolW-like SYN_00448 53b4ea0645d88d446b9aff96f5e507eb 717 Gene3D G3DSA:3.30.1370.120 119 278 1.7E-14 T 11-10-2018 IPR038591 NolW-like superfamily SYN_00448 53b4ea0645d88d446b9aff96f5e507eb 717 Gene3D G3DSA:3.30.1370.120 341 464 4.6E-8 T 11-10-2018 IPR038591 NolW-like superfamily SYN_00448 53b4ea0645d88d446b9aff96f5e507eb 717 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 133 706 5.3E-111 T 11-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 SYN_00448 53b4ea0645d88d446b9aff96f5e507eb 717 PRINTS PR00811 Bacterial general secretion pathway protein D signature 463 473 4.5E-29 T 11-10-2018 IPR001775 GspD/PilQ family SYN_00448 53b4ea0645d88d446b9aff96f5e507eb 717 PRINTS PR00811 Bacterial general secretion pathway protein D signature 559 569 4.5E-29 T 11-10-2018 IPR001775 GspD/PilQ family SYN_00448 53b4ea0645d88d446b9aff96f5e507eb 717 PRINTS PR00811 Bacterial general secretion pathway protein D signature 684 698 4.5E-29 T 11-10-2018 IPR001775 GspD/PilQ family SYN_00448 53b4ea0645d88d446b9aff96f5e507eb 717 PRINTS PR00811 Bacterial general secretion pathway protein D signature 661 679 4.5E-29 T 11-10-2018 IPR001775 GspD/PilQ family SYN_00448 53b4ea0645d88d446b9aff96f5e507eb 717 PRINTS PR00811 Bacterial general secretion pathway protein D signature 524 548 4.5E-29 T 11-10-2018 IPR001775 GspD/PilQ family SYN_00448 53b4ea0645d88d446b9aff96f5e507eb 717 Pfam PF00263 Bacterial type II and III secretion system protein 528 696 9.6E-50 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 SYN_00459 4c9a16fab75337b0a234a4ff7b3d36f6 137 Gene3D G3DSA:3.30.700.10 30 137 1.1E-25 T 11-10-2018 SYN_00459 4c9a16fab75337b0a234a4ff7b3d36f6 137 Pfam PF08334 Type II secretion system (T2SS), protein G 39 132 2.3E-27 T 11-10-2018 IPR013545 Type II secretion system protein G SYN_00459 4c9a16fab75337b0a234a4ff7b3d36f6 137 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 36 2.0E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site SYN_00459 4c9a16fab75337b0a234a4ff7b3d36f6 137 SUPERFAMILY SSF54523 42 132 3.14E-24 T 11-10-2018 SYN_00459 4c9a16fab75337b0a234a4ff7b3d36f6 137 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 15 129 2.3E-34 T 11-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 SYN_00459 4c9a16fab75337b0a234a4ff7b3d36f6 137 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 15 35 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site SYN_00459 4c9a16fab75337b0a234a4ff7b3d36f6 137 PRINTS PR00813 Bacterial general secretion pathway protein G signature 52 70 5.1E-13 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 SYN_00459 4c9a16fab75337b0a234a4ff7b3d36f6 137 PRINTS PR00813 Bacterial general secretion pathway protein G signature 16 41 5.1E-13 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 SYN_00459 4c9a16fab75337b0a234a4ff7b3d36f6 137 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 36 1.9E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site SYN_01949 4c60475407a89f42968917f0ca75c118 727 Gene3D G3DSA:3.40.50.261 567 726 4.8E-32 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_01949 4c60475407a89f42968917f0ca75c118 727 Pfam PF13549 ATP-grasp domain 43 257 6.6E-78 T 11-10-2018 SYN_01949 4c60475407a89f42968917f0ca75c118 727 SUPERFAMILY SSF51735 278 405 5.22E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_01949 4c60475407a89f42968917f0ca75c118 727 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 427 563 2.4E-40 T 11-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain SYN_01949 4c60475407a89f42968917f0ca75c118 727 SUPERFAMILY SSF52210 569 720 3.14E-26 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_01949 4c60475407a89f42968917f0ca75c118 727 SUPERFAMILY SSF52210 407 566 3.01E-31 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_01949 4c60475407a89f42968917f0ca75c118 727 Pfam PF13380 CoA binding domain 285 410 1.0E-21 T 11-10-2018 IPR003781 CoA-binding GO:0048037 SYN_01949 4c60475407a89f42968917f0ca75c118 727 Gene3D G3DSA:3.30.470.20 52 256 1.6E-79 T 11-10-2018 SYN_01949 4c60475407a89f42968917f0ca75c118 727 Gene3D G3DSA:3.30.1490.20 70 143 1.6E-79 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 SYN_01949 4c60475407a89f42968917f0ca75c118 727 Gene3D G3DSA:3.40.50.261 406 566 2.1E-43 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_01949 4c60475407a89f42968917f0ca75c118 727 Gene3D G3DSA:3.40.50.720 274 404 9.8E-43 T 11-10-2018 SYN_01949 4c60475407a89f42968917f0ca75c118 727 SMART SM00881 280 375 6.8E-33 T 11-10-2018 IPR003781 CoA-binding GO:0048037 SYN_01949 4c60475407a89f42968917f0ca75c118 727 SUPERFAMILY SSF56059 51 258 1.9E-42 T 11-10-2018 SYN_01501 7553391a7e093581f857ee29e3054991 332 SUPERFAMILY SSF48452 74 311 3.6E-45 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_01501 7553391a7e093581f857ee29e3054991 332 Pfam PF00515 Tetratricopeptide repeat 277 310 1.4E-10 T 11-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 SYN_01501 7553391a7e093581f857ee29e3054991 332 Pfam PF13432 Tetratricopeptide repeat 115 177 5.2E-5 T 11-10-2018 SYN_01501 7553391a7e093581f857ee29e3054991 332 SMART SM00028 145 178 0.0059 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01501 7553391a7e093581f857ee29e3054991 332 SMART SM00028 277 310 4.2E-9 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01501 7553391a7e093581f857ee29e3054991 332 SMART SM00028 77 110 1.3 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01501 7553391a7e093581f857ee29e3054991 332 SMART SM00028 247 275 33.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01501 7553391a7e093581f857ee29e3054991 332 SMART SM00028 179 212 3.8E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01501 7553391a7e093581f857ee29e3054991 332 SMART SM00028 213 246 1.6E-6 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01501 7553391a7e093581f857ee29e3054991 332 SMART SM00028 111 144 24.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01501 7553391a7e093581f857ee29e3054991 332 Pfam PF13414 TPR repeat 192 227 4.6E-11 T 11-10-2018 SYN_01501 7553391a7e093581f857ee29e3054991 332 Pfam PF13374 Tetratricopeptide repeat 248 273 9.6E-5 T 11-10-2018 SYN_01501 7553391a7e093581f857ee29e3054991 332 Gene3D G3DSA:1.25.40.10 209 275 8.7E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_01501 7553391a7e093581f857ee29e3054991 332 Gene3D G3DSA:1.25.40.10 136 208 1.4E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_01501 7553391a7e093581f857ee29e3054991 332 Gene3D G3DSA:1.25.40.10 276 330 2.0E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_01501 7553391a7e093581f857ee29e3054991 332 Gene3D G3DSA:1.25.40.10 34 135 1.0E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_01501 7553391a7e093581f857ee29e3054991 332 Pfam PF13181 Tetratricopeptide repeat 77 109 0.0021 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_03523 3cb300f1404fd29bcd4920d7c3a8f71a 251 SUPERFAMILY SSF102114 38 240 1.7E-27 T 11-10-2018 SYN_03523 3cb300f1404fd29bcd4920d7c3a8f71a 251 Pfam PF13353 4Fe-4S single cluster domain 34 153 2.5E-12 T 11-10-2018 SYN_03523 3cb300f1404fd29bcd4920d7c3a8f71a 251 Pfam PF04055 Radical SAM superfamily 40 183 2.0E-17 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_03523 3cb300f1404fd29bcd4920d7c3a8f71a 251 Gene3D G3DSA:3.20.20.70 19 244 8.1E-37 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_03523 3cb300f1404fd29bcd4920d7c3a8f71a 251 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 22 210 4.4E-62 T 11-10-2018 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein SYN_02218 af7081460255faafe58b478ca36fdd32 850 SUPERFAMILY SSF56784 313 686 4.12E-60 T 11-10-2018 IPR036412 HAD-like superfamily SYN_02218 af7081460255faafe58b478ca36fdd32 850 Pfam PF00690 Cation transporter/ATPase, N-terminus 11 60 2.6E-10 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 SYN_02218 af7081460255faafe58b478ca36fdd32 850 Gene3D G3DSA:3.40.50.1000 494 632 3.4E-120 T 11-10-2018 IPR023214 HAD superfamily SYN_02218 af7081460255faafe58b478ca36fdd32 850 Gene3D G3DSA:3.40.50.1000 312 324 2.1E-94 T 11-10-2018 IPR023214 HAD superfamily SYN_02218 af7081460255faafe58b478ca36fdd32 850 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 446 464 1.4E-19 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SYN_02218 af7081460255faafe58b478ca36fdd32 850 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 559 575 1.4E-19 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SYN_02218 af7081460255faafe58b478ca36fdd32 850 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 587 603 1.4E-19 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SYN_02218 af7081460255faafe58b478ca36fdd32 850 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 619 644 1.4E-19 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SYN_02218 af7081460255faafe58b478ca36fdd32 850 Gene3D G3DSA:3.40.1110.10 325 336 2.1E-94 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 SYN_02218 af7081460255faafe58b478ca36fdd32 850 Gene3D G3DSA:3.40.1110.10 388 493 3.4E-120 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 SYN_02218 af7081460255faafe58b478ca36fdd32 850 Pfam PF00122 E1-E2 ATPase 101 294 2.2E-43 T 11-10-2018 SYN_02218 af7081460255faafe58b478ca36fdd32 850 Gene3D G3DSA:1.20.1110.10 44 311 2.1E-94 T 11-10-2018 SYN_02218 af7081460255faafe58b478ca36fdd32 850 Pfam PF00689 Cation transporting ATPase, C-terminus 671 843 5.6E-35 T 11-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 SYN_02218 af7081460255faafe58b478ca36fdd32 850 Gene3D G3DSA:2.70.150.10 12 218 2.1E-94 T 11-10-2018 SYN_02218 af7081460255faafe58b478ca36fdd32 850 SUPERFAMILY SSF81660 324 493 3.92E-20 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 SYN_02218 af7081460255faafe58b478ca36fdd32 850 SUPERFAMILY SSF81653 103 213 1.16E-26 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 SYN_02218 af7081460255faafe58b478ca36fdd32 850 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 508 518 6.9E-39 T 11-10-2018 SYN_02218 af7081460255faafe58b478ca36fdd32 850 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 151 165 6.9E-39 T 11-10-2018 SYN_02218 af7081460255faafe58b478ca36fdd32 850 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 587 606 6.9E-39 T 11-10-2018 SYN_02218 af7081460255faafe58b478ca36fdd32 850 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 486 497 6.9E-39 T 11-10-2018 SYN_02218 af7081460255faafe58b478ca36fdd32 850 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 315 329 6.9E-39 T 11-10-2018 SYN_02218 af7081460255faafe58b478ca36fdd32 850 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 611 623 6.9E-39 T 11-10-2018 SYN_02218 af7081460255faafe58b478ca36fdd32 850 SUPERFAMILY SSF81665 11 843 3.92E-100 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 SYN_02218 af7081460255faafe58b478ca36fdd32 850 SMART SM00831 1 66 0.0013 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 SYN_02218 af7081460255faafe58b478ca36fdd32 850 Gene3D G3DSA:1.20.1110.10 633 841 3.4E-120 T 11-10-2018 SYN_02218 af7081460255faafe58b478ca36fdd32 850 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 73 339 3.6E-38 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SYN_02218 af7081460255faafe58b478ca36fdd32 850 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 558 676 4.1E-31 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SYN_02218 af7081460255faafe58b478ca36fdd32 850 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 317 323 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 SYN_02218 af7081460255faafe58b478ca36fdd32 850 Pfam PF00702 haloacid dehalogenase-like hydrolase 313 600 1.2E-25 T 11-10-2018 SYN_00248 e49cd6d54e5319359677d02dcef4a497 229 SUPERFAMILY SSF46785 149 223 7.67E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_00248 e49cd6d54e5319359677d02dcef4a497 229 Pfam PF00027 Cyclic nucleotide-binding domain 32 117 6.1E-21 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain SYN_00248 e49cd6d54e5319359677d02dcef4a497 229 Pfam PF13545 Crp-like helix-turn-helix domain 151 221 7.1E-18 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SYN_00248 e49cd6d54e5319359677d02dcef4a497 229 Gene3D G3DSA:1.10.10.10 146 221 8.2E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_00248 e49cd6d54e5319359677d02dcef4a497 229 SMART SM00419 166 214 1.4E-8 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SYN_00248 e49cd6d54e5319359677d02dcef4a497 229 SUPERFAMILY SSF51206 7 146 1.09E-37 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like SYN_00248 e49cd6d54e5319359677d02dcef4a497 229 SMART SM00100 13 134 1.5E-23 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain SYN_00248 e49cd6d54e5319359677d02dcef4a497 229 Gene3D G3DSA:2.60.120.10 3 145 7.2E-44 T 11-10-2018 IPR014710 RmlC-like jelly roll fold SYN_02069 522d1491d04a49029659431a0d04600d 264 Pfam PF00005 ABC transporter 32 180 1.7E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_02069 522d1491d04a49029659431a0d04600d 264 Gene3D G3DSA:3.40.50.300 13 263 3.9E-56 T 11-10-2018 SYN_02069 522d1491d04a49029659431a0d04600d 264 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_02069 522d1491d04a49029659431a0d04600d 264 SMART SM00382 40 228 6.4E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_02069 522d1491d04a49029659431a0d04600d 264 SUPERFAMILY SSF52540 15 248 8.16E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01101 de3d0ab62affe021e93ff26cb925a741 390 Gene3D G3DSA:3.40.50.2000 190 363 2.2E-38 T 11-10-2018 SYN_01101 de3d0ab62affe021e93ff26cb925a741 390 Pfam PF13439 Glycosyltransferase Family 4 65 174 7.3E-7 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 SYN_01101 de3d0ab62affe021e93ff26cb925a741 390 SUPERFAMILY SSF53756 73 380 2.62E-54 T 11-10-2018 SYN_01101 de3d0ab62affe021e93ff26cb925a741 390 Pfam PF00534 Glycosyl transferases group 1 207 360 3.8E-27 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 SYN_01101 de3d0ab62affe021e93ff26cb925a741 390 Gene3D G3DSA:3.40.50.2000 53 189 8.2E-6 T 11-10-2018 SYN_02055 7228954ea2bee69fe9226903820a65a6 263 Gene3D G3DSA:3.40.1280.10 16 179 4.5E-52 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SYN_02055 7228954ea2bee69fe9226903820a65a6 263 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 18 250 4.5E-59 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 SYN_02055 7228954ea2bee69fe9226903820a65a6 263 Pfam PF00588 SpoU rRNA Methylase family 21 171 2.1E-29 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SYN_02055 7228954ea2bee69fe9226903820a65a6 263 Gene3D G3DSA:1.10.8.590 187 248 4.1E-19 T 11-10-2018 SYN_02055 7228954ea2bee69fe9226903820a65a6 263 PIRSF PIRSF004808 15 255 8.0E-66 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 SYN_02055 7228954ea2bee69fe9226903820a65a6 263 SUPERFAMILY SSF75217 17 177 9.81E-32 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases SYN_00316 fafda4173a191f341d16e637b9280a00 509 Pfam PF02913 FAD linked oxidases, C-terminal domain 269 506 3.3E-51 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 SYN_00316 fafda4173a191f341d16e637b9280a00 509 SUPERFAMILY SSF56176 56 269 7.01E-68 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 SYN_00316 fafda4173a191f341d16e637b9280a00 509 Gene3D G3DSA:3.30.70.2740 389 468 4.5E-13 T 11-10-2018 SYN_00316 fafda4173a191f341d16e637b9280a00 509 Gene3D G3DSA:3.30.465.40 68 284 9.7E-73 T 11-10-2018 SYN_00316 fafda4173a191f341d16e637b9280a00 509 SUPERFAMILY SSF55103 273 509 3.92E-55 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 SYN_00316 fafda4173a191f341d16e637b9280a00 509 Pfam PF01565 FAD binding domain 95 232 2.1E-41 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 SYN_00316 fafda4173a191f341d16e637b9280a00 509 Gene3D G3DSA:1.10.45.10 469 507 1.3E-11 T 11-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 SYN_01211 4b05a883e57d26a30bca5838f08a0997 304 Gene3D G3DSA:3.40.718.10 19 299 3.3E-66 T 11-10-2018 SYN_01211 4b05a883e57d26a30bca5838f08a0997 304 PIRSF PIRSF000428 2 299 3.0E-47 T 11-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 SYN_01211 4b05a883e57d26a30bca5838f08a0997 304 SUPERFAMILY SSF53659 34 297 2.34E-38 T 11-10-2018 SYN_01211 4b05a883e57d26a30bca5838f08a0997 304 Pfam PF01515 Phosphate acetyl/butaryl transferase 55 274 7.1E-29 T 11-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 SYN_01262 9f5ba44cbc5101c0b72d6376c7537837 284 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 30 283 7.7E-71 T 11-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria SYN_01262 9f5ba44cbc5101c0b72d6376c7537837 284 Pfam PF02405 Permease MlaE 67 281 2.5E-76 T 11-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 SYN_02048 784389278e713f9ba0e8f8f5ab1860a0 833 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 506 550 8.5E-8 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SYN_02048 784389278e713f9ba0e8f8f5ab1860a0 833 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 659 704 2.1E-14 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SYN_02048 784389278e713f9ba0e8f8f5ab1860a0 833 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 613 655 1.9E-7 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SYN_02048 784389278e713f9ba0e8f8f5ab1860a0 833 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 760 804 3.3E-11 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SYN_02048 784389278e713f9ba0e8f8f5ab1860a0 833 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 711 750 4.9E-8 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SYN_02048 784389278e713f9ba0e8f8f5ab1860a0 833 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 555 604 6.4E-12 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SYN_02048 784389278e713f9ba0e8f8f5ab1860a0 833 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 2 808 24.404 T 11-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SYN_02048 784389278e713f9ba0e8f8f5ab1860a0 833 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 12 805 0.0 T 11-10-2018 SYN_02048 784389278e713f9ba0e8f8f5ab1860a0 833 SUPERFAMILY SSF56719 32 489 2.75E-178 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 SYN_02048 784389278e713f9ba0e8f8f5ab1860a0 833 SMART SM00434 12 466 1.7E-277 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 SYN_02048 784389278e713f9ba0e8f8f5ab1860a0 833 Gene3D G3DSA:2.120.10.90 497 806 2.7E-121 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal SYN_02048 784389278e713f9ba0e8f8f5ab1860a0 833 Gene3D G3DSA:1.10.268.10 371 470 4.6E-210 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 SYN_02048 784389278e713f9ba0e8f8f5ab1860a0 833 Gene3D G3DSA:3.90.199.10 34 487 4.6E-210 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 SYN_02048 784389278e713f9ba0e8f8f5ab1860a0 833 SUPERFAMILY SSF101904 500 819 4.32E-107 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal SYN_02048 784389278e713f9ba0e8f8f5ab1860a0 833 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 472 3.9E-159 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 SYN_02048 784389278e713f9ba0e8f8f5ab1860a0 833 Gene3D G3DSA:3.30.1360.40 237 334 4.6E-210 T 11-10-2018 SYN_00582 016a78e10b38b319b15c82374a4d15d7 180 SMART SM00344 33 141 0.0058 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 SYN_00582 016a78e10b38b319b15c82374a4d15d7 180 Gene3D G3DSA:3.30.70.3460 56 180 4.9E-36 T 11-10-2018 SYN_00582 016a78e10b38b319b15c82374a4d15d7 180 SUPERFAMILY SSF46785 31 87 1.54E-6 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_01447 0ccf1f8a43d04b49f1541dcd43219f71 689 Pfam PF02779 Transketolase, pyrimidine binding domain 357 542 1.4E-48 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain SYN_01447 0ccf1f8a43d04b49f1541dcd43219f71 689 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 8 340 6.2E-151 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 SYN_01447 0ccf1f8a43d04b49f1541dcd43219f71 689 SUPERFAMILY SSF52518 6 326 1.96E-109 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold SYN_01447 0ccf1f8a43d04b49f1541dcd43219f71 689 SMART SM00861 357 543 1.1E-65 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain SYN_01447 0ccf1f8a43d04b49f1541dcd43219f71 689 SUPERFAMILY SSF52518 339 544 8.93E-66 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold SYN_01447 0ccf1f8a43d04b49f1541dcd43219f71 689 Gene3D G3DSA:3.40.50.970 335 550 7.2E-80 T 11-10-2018 SYN_01447 0ccf1f8a43d04b49f1541dcd43219f71 689 Gene3D G3DSA:3.40.50.970 1 334 4.3E-120 T 11-10-2018 SYN_01447 0ccf1f8a43d04b49f1541dcd43219f71 689 Gene3D G3DSA:3.40.50.920 558 688 2.0E-39 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 SYN_01447 0ccf1f8a43d04b49f1541dcd43219f71 689 SUPERFAMILY SSF52922 553 684 2.28E-39 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 SYN_01447 0ccf1f8a43d04b49f1541dcd43219f71 689 ProSitePatterns PS00801 Transketolase signature 1. 16 36 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 SYN_01447 0ccf1f8a43d04b49f1541dcd43219f71 689 TIGRFAM TIGR00232 tktlase_bact: transketolase 10 683 3.8E-268 T 11-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 SYN_01447 0ccf1f8a43d04b49f1541dcd43219f71 689 Pfam PF02780 Transketolase, C-terminal domain 570 675 8.9E-12 T 11-10-2018 IPR033248 Transketolase, C-terminal domain SYN_00125 e00a84168a5447786936d587a63a087f 360 SUPERFAMILY SSF52540 3 337 2.94E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00125 e00a84168a5447786936d587a63a087f 360 Pfam PF00437 Type II/IV secretion system protein 9 264 1.5E-40 T 11-10-2018 IPR001482 Type II/IV secretion system protein SYN_00125 e00a84168a5447786936d587a63a087f 360 Gene3D G3DSA:3.40.50.300 102 353 9.9E-95 T 11-10-2018 SYN_00125 e00a84168a5447786936d587a63a087f 360 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 4 343 8.5E-138 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 SYN_00125 e00a84168a5447786936d587a63a087f 360 SMART SM00382 123 257 3.8E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00125 e00a84168a5447786936d587a63a087f 360 Gene3D G3DSA:3.30.450.90 2 101 5.5E-30 T 11-10-2018 SYN_00125 e00a84168a5447786936d587a63a087f 360 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 194 208 - T 11-10-2018 IPR001482 Type II/IV secretion system protein SYN_00719 a263f6728a6beb7265be496c3101ba7f 131 Pfam PF02583 Metal-sensitive transcriptional repressor 48 125 7.8E-28 T 11-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 SYN_00719 a263f6728a6beb7265be496c3101ba7f 131 Gene3D G3DSA:1.20.58.1000 31 129 4.1E-29 T 11-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily SYN_01347 e129039e2157e5a872663926ef9fdfa3 374 Pfam PF02675 S-adenosylmethionine decarboxylase 24 130 2.1E-27 T 11-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 SYN_01347 e129039e2157e5a872663926ef9fdfa3 374 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 216 229 - T 11-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 SYN_01347 e129039e2157e5a872663926ef9fdfa3 374 SUPERFAMILY SSF56276 20 131 3.14E-24 T 11-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 SYN_01347 e129039e2157e5a872663926ef9fdfa3 374 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 139 374 18.819 T 11-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 SYN_01347 e129039e2157e5a872663926ef9fdfa3 374 Gene3D G3DSA:2.30.140.10 142 191 1.4E-12 T 11-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 SYN_01347 e129039e2157e5a872663926ef9fdfa3 374 Gene3D G3DSA:3.40.50.150 195 374 4.8E-38 T 11-10-2018 SYN_01347 e129039e2157e5a872663926ef9fdfa3 374 SUPERFAMILY SSF53335 148 373 1.55E-46 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_01347 e129039e2157e5a872663926ef9fdfa3 374 Gene3D G3DSA:3.60.90.10 9 141 4.5E-31 T 11-10-2018 SYN_01347 e129039e2157e5a872663926ef9fdfa3 374 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 20 130 5.4E-28 T 11-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 SYN_01347 e129039e2157e5a872663926ef9fdfa3 374 Pfam PF01564 Spermine/spermidine synthase domain 198 369 3.4E-28 T 11-10-2018 SYN_01347 e129039e2157e5a872663926ef9fdfa3 374 Pfam PF17284 Spermidine synthase tetramerisation domain 140 192 8.8E-14 T 11-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 SYN_03083 33a9ab7f3a66cffdc6964a091054c5b9 85 Gene3D G3DSA:3.40.30.10 43 84 2.6E-7 T 11-10-2018 SYN_03083 33a9ab7f3a66cffdc6964a091054c5b9 85 SUPERFAMILY SSF52833 48 81 7.29E-6 T 11-10-2018 IPR036249 Thioredoxin-like superfamily SYN_03083 33a9ab7f3a66cffdc6964a091054c5b9 85 Pfam PF00578 AhpC/TSA family 50 81 4.8E-5 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 SYN_02462 3a8cb58b84783b4053cfebf19ca10420 431 Pfam PF02321 Outer membrane efflux protein 39 226 5.7E-35 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SYN_02462 3a8cb58b84783b4053cfebf19ca10420 431 Pfam PF02321 Outer membrane efflux protein 251 429 1.1E-36 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SYN_02462 3a8cb58b84783b4053cfebf19ca10420 431 PIRSF PIRSF001892 13 431 4.2E-137 T 11-10-2018 IPR028351 Cyclolysin transport protein CyaE GO:0005215 SYN_02462 3a8cb58b84783b4053cfebf19ca10420 431 PIRSF PIRSF001892 1 32 66.0 T 11-10-2018 IPR028351 Cyclolysin transport protein CyaE GO:0005215 SYN_02462 3a8cb58b84783b4053cfebf19ca10420 431 Gene3D G3DSA:1.20.1600.10 26 431 2.1E-102 T 11-10-2018 SYN_02462 3a8cb58b84783b4053cfebf19ca10420 431 SUPERFAMILY SSF56954 5 430 2.75E-97 T 11-10-2018 SYN_00511 0eaa4d99c80f63f7d6e21c11049f1274 401 SUPERFAMILY SSF56281 9 279 1.44E-50 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_00511 0eaa4d99c80f63f7d6e21c11049f1274 401 Gene3D G3DSA:3.40.50.360 251 400 4.0E-37 T 11-10-2018 IPR029039 Flavoprotein-like superfamily SYN_00511 0eaa4d99c80f63f7d6e21c11049f1274 401 SUPERFAMILY SSF52218 249 396 1.61E-34 T 11-10-2018 IPR029039 Flavoprotein-like superfamily SYN_00511 0eaa4d99c80f63f7d6e21c11049f1274 401 PIRSF PIRSF005243 1 399 8.4E-144 T 11-10-2018 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 SYN_00511 0eaa4d99c80f63f7d6e21c11049f1274 401 Pfam PF00753 Metallo-beta-lactamase superfamily 34 225 9.9E-10 T 11-10-2018 IPR001279 Metallo-beta-lactamase SYN_00511 0eaa4d99c80f63f7d6e21c11049f1274 401 Pfam PF00258 Flavodoxin 254 386 2.1E-11 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 SYN_00511 0eaa4d99c80f63f7d6e21c11049f1274 401 Gene3D G3DSA:3.60.15.10 1 245 4.4E-96 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_00511 0eaa4d99c80f63f7d6e21c11049f1274 401 SMART SM00849 34 225 4.0E-27 T 11-10-2018 IPR001279 Metallo-beta-lactamase SYN_01018 204c151fe84e4a4420c864154001381c 199 ProSitePatterns PS00893 Nudix box signature. 100 121 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SYN_01018 204c151fe84e4a4420c864154001381c 199 SUPERFAMILY SSF55811 60 195 9.07E-34 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 SYN_01018 204c151fe84e4a4420c864154001381c 199 Gene3D G3DSA:3.90.79.10 45 197 1.9E-35 T 11-10-2018 SYN_01018 204c151fe84e4a4420c864154001381c 199 PRINTS PR00502 NUDIX hydrolase family signature 109 124 4.0E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 SYN_01018 204c151fe84e4a4420c864154001381c 199 PRINTS PR00502 NUDIX hydrolase family signature 95 109 4.0E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 SYN_01018 204c151fe84e4a4420c864154001381c 199 Pfam PF00293 NUDIX domain 68 183 9.4E-18 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 SYN_00481 e78c74f03a9179f3c7117d5733016335 590 Pfam PF01039 Carboxyl transferase domain 54 568 1.0E-93 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 SYN_00481 e78c74f03a9179f3c7117d5733016335 590 SUPERFAMILY SSF52096 18 250 2.45E-38 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily SYN_00481 e78c74f03a9179f3c7117d5733016335 590 Gene3D G3DSA:3.90.226.10 287 581 1.3E-69 T 11-10-2018 SYN_00481 e78c74f03a9179f3c7117d5733016335 590 SUPERFAMILY SSF52096 292 575 4.66E-51 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily SYN_00481 e78c74f03a9179f3c7117d5733016335 590 Gene3D G3DSA:1.20.5.680 1 58 2.2E-8 T 11-10-2018 SYN_00481 e78c74f03a9179f3c7117d5733016335 590 Gene3D G3DSA:3.90.226.10 59 286 1.1E-41 T 11-10-2018 SYN_02860 0b000e6d85280388c8af03c9a07bbeff 475 Pfam PF06725 3D domain 379 460 8.9E-17 T 11-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 SYN_02860 0b000e6d85280388c8af03c9a07bbeff 475 PIRSF PIRSF019422 3 473 7.7E-153 T 11-10-2018 IPR026044 Membrane-bound lytic murein transglycosylase A SYN_02860 0b000e6d85280388c8af03c9a07bbeff 475 SUPERFAMILY SSF50685 94 465 1.95E-107 T 11-10-2018 IPR036908 RlpA-like domain superfamily SYN_02860 0b000e6d85280388c8af03c9a07bbeff 475 Gene3D G3DSA:2.40.240.50 202 365 1.7E-94 T 11-10-2018 SYN_02860 0b000e6d85280388c8af03c9a07bbeff 475 SMART SM00925 203 361 4.5E-82 T 11-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 SYN_02860 0b000e6d85280388c8af03c9a07bbeff 475 Gene3D G3DSA:2.40.40.10 114 461 1.7E-94 T 11-10-2018 IPR036908 RlpA-like domain superfamily SYN_02860 0b000e6d85280388c8af03c9a07bbeff 475 Pfam PF03562 MltA specific insert domain 116 361 7.0E-66 T 11-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 SYN_01322 f2177a28d9d5b8b4bd4301b7a7b98fcf 133 Gene3D G3DSA:3.40.50.450 44 129 3.2E-14 T 11-10-2018 SYN_01322 f2177a28d9d5b8b4bd4301b7a7b98fcf 133 Pfam PF12694 Putative molybdenum carrier 57 128 8.8E-10 T 11-10-2018 IPR024755 Molybdenum cofactor carrier, putative SYN_00102 cc4d5f82d4fac65a51c3d8e631de403c 448 SUPERFAMILY SSF46589 24 134 1.26E-30 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 SYN_00102 cc4d5f82d4fac65a51c3d8e631de403c 448 PIRSF PIRSF001529 24 448 2.9E-184 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 SYN_00102 cc4d5f82d4fac65a51c3d8e631de403c 448 Gene3D G3DSA:3.30.930.10 128 448 6.8E-125 T 11-10-2018 SYN_00102 cc4d5f82d4fac65a51c3d8e631de403c 448 PRINTS PR00981 Seryl-tRNA synthetase signature 373 389 6.3E-34 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 SYN_00102 cc4d5f82d4fac65a51c3d8e631de403c 448 PRINTS PR00981 Seryl-tRNA synthetase signature 298 311 6.3E-34 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 SYN_00102 cc4d5f82d4fac65a51c3d8e631de403c 448 PRINTS PR00981 Seryl-tRNA synthetase signature 355 371 6.3E-34 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 SYN_00102 cc4d5f82d4fac65a51c3d8e631de403c 448 PRINTS PR00981 Seryl-tRNA synthetase signature 338 351 6.3E-34 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 SYN_00102 cc4d5f82d4fac65a51c3d8e631de403c 448 PRINTS PR00981 Seryl-tRNA synthetase signature 286 298 6.3E-34 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 SYN_00102 cc4d5f82d4fac65a51c3d8e631de403c 448 TIGRFAM TIGR00414 serS: serine--tRNA ligase 24 439 1.2E-174 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 SYN_00102 cc4d5f82d4fac65a51c3d8e631de403c 448 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 24 130 2.0E-31 T 11-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 SYN_00102 cc4d5f82d4fac65a51c3d8e631de403c 448 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 242 422 1.4E-35 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_00102 cc4d5f82d4fac65a51c3d8e631de403c 448 Gene3D G3DSA:1.10.287.40 24 127 6.3E-27 T 11-10-2018 SYN_00102 cc4d5f82d4fac65a51c3d8e631de403c 448 SUPERFAMILY SSF55681 140 440 2.88E-100 T 11-10-2018 SYN_00102 cc4d5f82d4fac65a51c3d8e631de403c 448 Hamap MF_00176 Serine--tRNA ligase [serS]. 24 444 42.271 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 SYN_01228 5248a172968db6eff8deee4f5e506778 91 Pfam PF00216 Bacterial DNA-binding protein 1 88 8.7E-30 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SYN_01228 5248a172968db6eff8deee4f5e506778 91 SMART SM00411 1 89 3.8E-37 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SYN_01228 5248a172968db6eff8deee4f5e506778 91 PRINTS PR01727 Prokaryotic integration host factor signature 57 70 2.4E-18 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SYN_01228 5248a172968db6eff8deee4f5e506778 91 PRINTS PR01727 Prokaryotic integration host factor signature 39 54 2.4E-18 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SYN_01228 5248a172968db6eff8deee4f5e506778 91 PRINTS PR01727 Prokaryotic integration host factor signature 73 87 2.4E-18 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SYN_01228 5248a172968db6eff8deee4f5e506778 91 SUPERFAMILY SSF47729 1 89 2.06E-29 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 SYN_01228 5248a172968db6eff8deee4f5e506778 91 Gene3D G3DSA:4.10.520.10 1 91 1.3E-32 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 SYN_01228 5248a172968db6eff8deee4f5e506778 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 45 64 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 SYN_02268 fbb8491800b85a26c9bba6aea2cf2c11 397 TIGRFAM TIGR04546 rSAM_ahbC_deAc: 12,18-didecarboxysiroheme deacetylase 2 391 1.8E-237 T 11-10-2018 IPR030894 12,18-Didecarboxysiroheme deacetylase SYN_02268 fbb8491800b85a26c9bba6aea2cf2c11 397 Pfam PF04055 Radical SAM superfamily 45 185 4.5E-24 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_02268 fbb8491800b85a26c9bba6aea2cf2c11 397 PIRSF PIRSF037420 21 396 2.5E-144 T 11-10-2018 IPR017200 Coenzyme PQQ synthesis protein E SYN_02268 fbb8491800b85a26c9bba6aea2cf2c11 397 Gene3D G3DSA:3.20.20.70 38 348 2.0E-52 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_02268 fbb8491800b85a26c9bba6aea2cf2c11 397 SMART SM00729 40 242 4.5E-4 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SYN_02268 fbb8491800b85a26c9bba6aea2cf2c11 397 Pfam PF13353 4Fe-4S single cluster domain 42 148 2.9E-11 T 11-10-2018 SYN_02268 fbb8491800b85a26c9bba6aea2cf2c11 397 SUPERFAMILY SSF102114 41 364 5.36E-74 T 11-10-2018 SYN_02268 fbb8491800b85a26c9bba6aea2cf2c11 397 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 301 384 3.2E-8 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain SYN_03437 cddf91f4c783304aa80e088b9124efbd 58 Pfam PF08734 GYD domain 1 52 1.1E-7 T 11-10-2018 IPR014845 Protein GYD/TTHA1554 SYN_00515 c0fd9c640fda7bafd42a0e7b8f5f9ebf 236 Pfam PF09335 SNARE associated Golgi protein 70 194 5.5E-20 T 11-10-2018 IPR032816 SNARE associated Golgi protein SYN_03131 eced3da3c1baee4108bf60509bfdc4dc 185 Gene3D G3DSA:3.90.280.10 21 184 1.6E-64 T 11-10-2018 IPR036610 PEBP-like superfamily SYN_03131 eced3da3c1baee4108bf60509bfdc4dc 185 SUPERFAMILY SSF49777 33 183 1.01E-53 T 11-10-2018 IPR036610 PEBP-like superfamily SYN_03131 eced3da3c1baee4108bf60509bfdc4dc 185 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 51 179 3.7E-47 T 11-10-2018 IPR005247 YbhB/YbcL SYN_03131 eced3da3c1baee4108bf60509bfdc4dc 185 Pfam PF01161 Phosphatidylethanolamine-binding protein 47 181 5.4E-43 T 11-10-2018 IPR008914 Phosphatidylethanolamine-binding protein SYN_02484 b3f4c8c91d0e0bc3645a6ef028780d38 279 Gene3D G3DSA:3.40.50.620 131 274 3.1E-12 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_02484 b3f4c8c91d0e0bc3645a6ef028780d38 279 Pfam PF00582 Universal stress protein family 139 274 1.8E-8 T 11-10-2018 IPR006016 UspA SYN_02484 b3f4c8c91d0e0bc3645a6ef028780d38 279 Pfam PF00582 Universal stress protein family 1 128 8.1E-10 T 11-10-2018 IPR006016 UspA SYN_02484 b3f4c8c91d0e0bc3645a6ef028780d38 279 Gene3D G3DSA:3.40.50.620 1 128 7.4E-14 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_02484 b3f4c8c91d0e0bc3645a6ef028780d38 279 SUPERFAMILY SSF52402 138 276 3.85E-17 T 11-10-2018 SYN_02484 b3f4c8c91d0e0bc3645a6ef028780d38 279 SUPERFAMILY SSF52402 1 128 7.62E-16 T 11-10-2018 SYN_01474 3d17bb3f42d69f4438220238d3e70c1e 146 Pfam PF02050 Flagellar FliJ protein 19 141 3.3E-14 T 11-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 SYN_01474 3d17bb3f42d69f4438220238d3e70c1e 146 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 3 141 3.9E-19 T 11-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 SYN_02176 56df59823e5d284aeb923823b813a04b 452 Pfam PF02310 B12 binding domain 109 173 3.5E-11 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 SYN_02176 56df59823e5d284aeb923823b813a04b 452 SMART SM00729 210 421 4.5E-13 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SYN_02176 56df59823e5d284aeb923823b813a04b 452 Gene3D G3DSA:3.40.50.280 93 189 2.8E-12 T 11-10-2018 SYN_02176 56df59823e5d284aeb923823b813a04b 452 SUPERFAMILY SSF102114 189 408 1.7E-31 T 11-10-2018 SYN_02176 56df59823e5d284aeb923823b813a04b 452 Pfam PF04055 Radical SAM superfamily 216 382 1.6E-11 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_02176 56df59823e5d284aeb923823b813a04b 452 Gene3D G3DSA:3.80.30.20 209 417 7.7E-15 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe SYN_02176 56df59823e5d284aeb923823b813a04b 452 SUPERFAMILY SSF52242 109 171 7.59E-8 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 SYN_02143 d839f7580852b2461bf0e0ff7b038f4c 215 SMART SM00849 21 190 7.9E-35 T 11-10-2018 IPR001279 Metallo-beta-lactamase SYN_02143 d839f7580852b2461bf0e0ff7b038f4c 215 SUPERFAMILY SSF56281 1 204 5.11E-50 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_02143 d839f7580852b2461bf0e0ff7b038f4c 215 Pfam PF00753 Metallo-beta-lactamase superfamily 20 190 2.1E-27 T 11-10-2018 IPR001279 Metallo-beta-lactamase SYN_02143 d839f7580852b2461bf0e0ff7b038f4c 215 Gene3D G3DSA:3.60.15.10 1 209 3.8E-47 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_00786 fdbc1c1ce421ab6127b1c4b7d7e151bd 265 SUPERFAMILY SSF52540 8 262 1.25E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00786 fdbc1c1ce421ab6127b1c4b7d7e151bd 265 Gene3D G3DSA:3.40.50.300 8 263 1.7E-58 T 11-10-2018 SYN_00786 fdbc1c1ce421ab6127b1c4b7d7e151bd 265 Pfam PF00005 ABC transporter 25 190 1.5E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_00786 fdbc1c1ce421ab6127b1c4b7d7e151bd 265 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 240 262 2.5E-11 T 11-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal SYN_00786 fdbc1c1ce421ab6127b1c4b7d7e151bd 265 SMART SM00382 34 239 6.4E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00274 a72f7ca202da5b8348ec0b1036982fb6 754 TIGRFAM TIGR03604 TOMM_cyclo_SagD: thiazole/oxazole-forming peptide maturase, SagD family component 398 752 4.3E-106 T 11-10-2018 IPR027624 Thiazole/oxazole-forming peptide maturase, SagD family component SYN_00274 a72f7ca202da5b8348ec0b1036982fb6 754 Gene3D G3DSA:2.40.50.820 427 517 1.5E-115 T 11-10-2018 SYN_00274 a72f7ca202da5b8348ec0b1036982fb6 754 SUPERFAMILY SSF69572 186 299 5.1E-5 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 SYN_00274 a72f7ca202da5b8348ec0b1036982fb6 754 Gene3D G3DSA:1.10.490.140 405 724 1.5E-115 T 11-10-2018 SYN_00274 a72f7ca202da5b8348ec0b1036982fb6 754 TIGRFAM TIGR03882 cyclo_dehyd_2: bacteriocin biosynthesis cyclodehydratase domain 184 352 3.2E-33 T 11-10-2018 IPR022291 Bacteriocin biosynthesis, cyclodehydratase domain SYN_00274 a72f7ca202da5b8348ec0b1036982fb6 754 Gene3D G3DSA:3.40.50.720 107 298 3.2E-35 T 11-10-2018 SYN_00274 a72f7ca202da5b8348ec0b1036982fb6 754 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 392 717 3.2E-38 T 11-10-2018 IPR003776 YcaO-like domain SYN_00274 a72f7ca202da5b8348ec0b1036982fb6 754 Gene3D G3DSA:3.30.160.660 554 668 1.5E-115 T 11-10-2018 SYN_00274 a72f7ca202da5b8348ec0b1036982fb6 754 Gene3D G3DSA:1.10.490.140 312 372 5.5E-7 T 11-10-2018 SYN_00274 a72f7ca202da5b8348ec0b1036982fb6 754 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 398 716 2.5E-87 T 11-10-2018 IPR003776 YcaO-like domain SYN_01473 2532fd5711bfff8614081560f10022a9 455 TIGRFAM TIGR03497 FliI_clade2: flagellar protein export ATPase FliI 34 446 1.0E-201 T 11-10-2018 IPR022425 Flagellar export ATPase FliI, clade 2 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SYN_01473 2532fd5711bfff8614081560f10022a9 455 SUPERFAMILY SSF52540 105 370 1.06E-96 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01473 2532fd5711bfff8614081560f10022a9 455 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 36 100 3.6E-7 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SYN_01473 2532fd5711bfff8614081560f10022a9 455 Gene3D G3DSA:3.40.50.12240 24 450 1.7E-154 T 11-10-2018 SYN_01473 2532fd5711bfff8614081560f10022a9 455 SMART SM00382 169 351 1.2E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01473 2532fd5711bfff8614081560f10022a9 455 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 21 445 3.2E-182 T 11-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SYN_01473 2532fd5711bfff8614081560f10022a9 455 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 157 367 1.3E-75 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SYN_01473 2532fd5711bfff8614081560f10022a9 455 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 358 367 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SYN_02158 a8f6b828c830c2a90f1886ab19174646 472 SUPERFAMILY SSF48557 11 459 2.83E-151 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 SYN_02158 a8f6b828c830c2a90f1886ab19174646 472 Gene3D G3DSA:1.10.40.30 367 439 9.6E-197 T 11-10-2018 SYN_02158 a8f6b828c830c2a90f1886ab19174646 472 ProSitePatterns PS00163 Fumarate lyases signature. 282 291 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 SYN_02158 a8f6b828c830c2a90f1886ab19174646 472 Pfam PF14698 Argininosuccinate lyase C-terminal 370 437 1.9E-23 T 11-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SYN_02158 a8f6b828c830c2a90f1886ab19174646 472 Gene3D G3DSA:1.20.200.10 126 455 9.6E-197 T 11-10-2018 SYN_02158 a8f6b828c830c2a90f1886ab19174646 472 Gene3D G3DSA:1.10.275.10 32 236 9.6E-197 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal SYN_02158 a8f6b828c830c2a90f1886ab19174646 472 PRINTS PR00149 Fumarate lyase superfamily signature 154 172 8.1E-28 T 11-10-2018 IPR000362 Fumarate lyase family SYN_02158 a8f6b828c830c2a90f1886ab19174646 472 PRINTS PR00149 Fumarate lyase superfamily signature 238 265 8.1E-28 T 11-10-2018 IPR000362 Fumarate lyase family SYN_02158 a8f6b828c830c2a90f1886ab19174646 472 PRINTS PR00149 Fumarate lyase superfamily signature 282 298 8.1E-28 T 11-10-2018 IPR000362 Fumarate lyase family SYN_02158 a8f6b828c830c2a90f1886ab19174646 472 PRINTS PR00149 Fumarate lyase superfamily signature 109 127 8.1E-28 T 11-10-2018 IPR000362 Fumarate lyase family SYN_02158 a8f6b828c830c2a90f1886ab19174646 472 Pfam PF00206 Lyase 13 307 1.7E-81 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal SYN_02158 a8f6b828c830c2a90f1886ab19174646 472 TIGRFAM TIGR00838 argH: argininosuccinate lyase 11 459 2.6E-194 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SYN_02158 a8f6b828c830c2a90f1886ab19174646 472 Hamap MF_00006 Argininosuccinate lyase [argH]. 9 460 43.901 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SYN_02158 a8f6b828c830c2a90f1886ab19174646 472 PRINTS PR00145 Argininosuccinate lyase family signature 317 336 1.6E-66 T 11-10-2018 SYN_02158 a8f6b828c830c2a90f1886ab19174646 472 PRINTS PR00145 Argininosuccinate lyase family signature 108 130 1.6E-66 T 11-10-2018 SYN_02158 a8f6b828c830c2a90f1886ab19174646 472 PRINTS PR00145 Argininosuccinate lyase family signature 238 262 1.6E-66 T 11-10-2018 SYN_02158 a8f6b828c830c2a90f1886ab19174646 472 PRINTS PR00145 Argininosuccinate lyase family signature 282 298 1.6E-66 T 11-10-2018 SYN_02158 a8f6b828c830c2a90f1886ab19174646 472 PRINTS PR00145 Argininosuccinate lyase family signature 200 216 1.6E-66 T 11-10-2018 SYN_02158 a8f6b828c830c2a90f1886ab19174646 472 PRINTS PR00145 Argininosuccinate lyase family signature 149 169 1.6E-66 T 11-10-2018 SYN_02796 8293fcb6c432107095be228cab17bf33 479 Gene3D G3DSA:3.30.830.10 54 259 4.6E-41 T 11-10-2018 SYN_02796 8293fcb6c432107095be228cab17bf33 479 SUPERFAMILY SSF63411 46 252 6.46E-39 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SYN_02796 8293fcb6c432107095be228cab17bf33 479 Pfam PF05193 Peptidase M16 inactive domain 213 389 4.8E-28 T 11-10-2018 IPR007863 Peptidase M16, C-terminal SYN_02796 8293fcb6c432107095be228cab17bf33 479 Pfam PF00675 Insulinase (Peptidase family M16) 68 200 4.6E-13 T 11-10-2018 IPR011765 Peptidase M16, N-terminal SYN_02796 8293fcb6c432107095be228cab17bf33 479 SUPERFAMILY SSF63411 279 468 4.78E-44 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SYN_02796 8293fcb6c432107095be228cab17bf33 479 Gene3D G3DSA:3.30.830.10 269 461 6.9E-46 T 11-10-2018 SYN_02211 ddb57ec64b15d44acabb368bc8e5a8e8 410 Pfam PF00909 Ammonium Transporter Family 7 406 6.3E-130 T 11-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 SYN_02211 ddb57ec64b15d44acabb368bc8e5a8e8 410 ProSitePatterns PS01219 Ammonium transporters signature. 161 186 - T 11-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 SYN_02211 ddb57ec64b15d44acabb368bc8e5a8e8 410 SUPERFAMILY SSF111352 2 387 4.45E-131 T 11-10-2018 SYN_02211 ddb57ec64b15d44acabb368bc8e5a8e8 410 TIGRFAM TIGR00836 amt: ammonium transporter 5 406 5.0E-144 T 11-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 SYN_02211 ddb57ec64b15d44acabb368bc8e5a8e8 410 Gene3D G3DSA:1.10.3430.10 1 410 1.2E-150 T 11-10-2018 IPR029020 Ammonium/urea transporter SYN_03032 b0dcd720f46d8817469e785acc0c0357 657 SUPERFAMILY SSF48310 239 656 2.88E-63 T 11-10-2018 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 SYN_03032 b0dcd720f46d8817469e785acc0c0357 657 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 239 644 8.4E-51 T 11-10-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 SYN_03032 b0dcd720f46d8817469e785acc0c0357 657 SUPERFAMILY SSF56228 5 208 2.88E-64 T 11-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily SYN_03032 b0dcd720f46d8817469e785acc0c0357 657 Gene3D G3DSA:1.10.599.10 501 646 1.7E-19 T 11-10-2018 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 SYN_03032 b0dcd720f46d8817469e785acc0c0357 657 Gene3D G3DSA:3.60.9.10 1 211 1.8E-82 T 11-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily SYN_03032 b0dcd720f46d8817469e785acc0c0357 657 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 10 206 6.5E-67 T 11-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 SYN_03032 b0dcd720f46d8817469e785acc0c0357 657 SMART SM00790 6 207 3.0E-93 T 11-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 SYN_03032 b0dcd720f46d8817469e785acc0c0357 657 Gene3D G3DSA:1.10.569.10 250 442 4.4E-56 T 11-10-2018 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 SYN_00020 abdeaa1c8b00e938840fef0fc42e4f98 333 SUPERFAMILY SSF82185 146 257 2.62E-28 T 11-10-2018 SYN_00020 abdeaa1c8b00e938840fef0fc42e4f98 333 SUPERFAMILY SSF82185 240 330 2.62E-24 T 11-10-2018 SYN_00020 abdeaa1c8b00e938840fef0fc42e4f98 333 Pfam PF02493 MORN repeat 267 287 1.1E-5 T 11-10-2018 IPR003409 MORN motif SYN_00020 abdeaa1c8b00e938840fef0fc42e4f98 333 Pfam PF02493 MORN repeat 198 212 0.15 T 11-10-2018 IPR003409 MORN motif SYN_00020 abdeaa1c8b00e938840fef0fc42e4f98 333 Pfam PF02493 MORN repeat 152 173 0.0086 T 11-10-2018 IPR003409 MORN motif SYN_00020 abdeaa1c8b00e938840fef0fc42e4f98 333 Pfam PF02493 MORN repeat 244 266 0.0013 T 11-10-2018 IPR003409 MORN motif SYN_00020 abdeaa1c8b00e938840fef0fc42e4f98 333 Pfam PF02493 MORN repeat 290 310 5.3E-6 T 11-10-2018 IPR003409 MORN motif SYN_00020 abdeaa1c8b00e938840fef0fc42e4f98 333 Pfam PF02493 MORN repeat 221 243 1.2E-6 T 11-10-2018 IPR003409 MORN motif SYN_00020 abdeaa1c8b00e938840fef0fc42e4f98 333 Pfam PF02493 MORN repeat 175 194 1.8E-5 T 11-10-2018 IPR003409 MORN motif SYN_00020 abdeaa1c8b00e938840fef0fc42e4f98 333 Gene3D G3DSA:2.20.110.10 139 202 3.9E-11 T 11-10-2018 SYN_00020 abdeaa1c8b00e938840fef0fc42e4f98 333 Gene3D G3DSA:2.20.110.10 203 271 2.7E-16 T 11-10-2018 SYN_00020 abdeaa1c8b00e938840fef0fc42e4f98 333 Gene3D G3DSA:2.20.110.10 272 333 1.3E-11 T 11-10-2018 SYN_00020 abdeaa1c8b00e938840fef0fc42e4f98 333 SMART SM00698 242 263 0.025 T 11-10-2018 IPR003409 MORN motif SYN_00020 abdeaa1c8b00e938840fef0fc42e4f98 333 SMART SM00698 196 217 0.41 T 11-10-2018 IPR003409 MORN motif SYN_00020 abdeaa1c8b00e938840fef0fc42e4f98 333 SMART SM00698 150 171 4.0 T 11-10-2018 IPR003409 MORN motif SYN_00020 abdeaa1c8b00e938840fef0fc42e4f98 333 SMART SM00698 173 194 7.4E-4 T 11-10-2018 IPR003409 MORN motif SYN_00020 abdeaa1c8b00e938840fef0fc42e4f98 333 SMART SM00698 265 286 2.9E-5 T 11-10-2018 IPR003409 MORN motif SYN_00020 abdeaa1c8b00e938840fef0fc42e4f98 333 SMART SM00698 288 309 0.0082 T 11-10-2018 IPR003409 MORN motif SYN_00020 abdeaa1c8b00e938840fef0fc42e4f98 333 SMART SM00698 219 240 0.032 T 11-10-2018 IPR003409 MORN motif SYN_02786 421a0ff43d80fb0a87cbce0f1c72db43 420 Gene3D G3DSA:3.30.50.30 5 53 3.5E-19 T 11-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily SYN_02786 421a0ff43d80fb0a87cbce0f1c72db43 420 SMART SM00994 14 53 6.7E-21 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 SYN_02786 421a0ff43d80fb0a87cbce0f1c72db43 420 SUPERFAMILY SSF52540 67 402 3.35E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02786 421a0ff43d80fb0a87cbce0f1c72db43 420 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 12 411 3.0E-191 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 SYN_02786 421a0ff43d80fb0a87cbce0f1c72db43 420 Pfam PF06689 ClpX C4-type zinc finger 16 52 3.5E-17 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 SYN_02786 421a0ff43d80fb0a87cbce0f1c72db43 420 Gene3D G3DSA:3.40.50.300 60 315 7.9E-104 T 11-10-2018 SYN_02786 421a0ff43d80fb0a87cbce0f1c72db43 420 SMART SM00382 113 276 1.2E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_02786 421a0ff43d80fb0a87cbce0f1c72db43 420 SUPERFAMILY SSF57716 15 50 7.56E-10 T 11-10-2018 SYN_02786 421a0ff43d80fb0a87cbce0f1c72db43 420 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 395 5.4E-14 T 11-10-2018 IPR019489 Clp ATPase, C-terminal SYN_02786 421a0ff43d80fb0a87cbce0f1c72db43 420 Pfam PF07724 AAA domain (Cdc48 subfamily) 113 311 5.5E-47 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 SYN_02786 421a0ff43d80fb0a87cbce0f1c72db43 420 Gene3D G3DSA:1.10.8.60 316 420 5.2E-36 T 11-10-2018 SYN_02786 421a0ff43d80fb0a87cbce0f1c72db43 420 SMART SM01086 317 412 1.6E-27 T 11-10-2018 IPR019489 Clp ATPase, C-terminal SYN_02786 421a0ff43d80fb0a87cbce0f1c72db43 420 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 6 415 51.262 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 SYN_02878 ac1686b73bba78661d23ac80a00f8afe 918 Gene3D G3DSA:3.40.630.30 753 918 8.0E-42 T 11-10-2018 SYN_02878 ac1686b73bba78661d23ac80a00f8afe 918 SUPERFAMILY SSF52210 145 304 1.07E-45 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_02878 ac1686b73bba78661d23ac80a00f8afe 918 SUPERFAMILY SSF55729 759 901 8.19E-25 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase SYN_02878 ac1686b73bba78661d23ac80a00f8afe 918 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 167 304 4.5E-57 T 11-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain SYN_02878 ac1686b73bba78661d23ac80a00f8afe 918 Gene3D G3DSA:3.40.50.720 18 145 2.0E-41 T 11-10-2018 SYN_02878 ac1686b73bba78661d23ac80a00f8afe 918 SUPERFAMILY SSF51735 19 146 2.92E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_02878 ac1686b73bba78661d23ac80a00f8afe 918 Gene3D G3DSA:3.40.50.261 309 471 8.3E-55 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_02878 ac1686b73bba78661d23ac80a00f8afe 918 Pfam PF13549 ATP-grasp domain 506 727 1.3E-79 T 11-10-2018 SYN_02878 ac1686b73bba78661d23ac80a00f8afe 918 Gene3D G3DSA:3.30.470.20 515 725 1.3E-75 T 11-10-2018 SYN_02878 ac1686b73bba78661d23ac80a00f8afe 918 SUPERFAMILY SSF52210 310 461 3.92E-41 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_02878 ac1686b73bba78661d23ac80a00f8afe 918 SUPERFAMILY SSF56059 515 730 4.21E-41 T 11-10-2018 SYN_02878 ac1686b73bba78661d23ac80a00f8afe 918 SMART SM00881 22 116 2.1E-31 T 11-10-2018 IPR003781 CoA-binding GO:0048037 SYN_02878 ac1686b73bba78661d23ac80a00f8afe 918 Pfam PF13380 CoA binding domain 27 150 1.1E-22 T 11-10-2018 IPR003781 CoA-binding GO:0048037 SYN_02878 ac1686b73bba78661d23ac80a00f8afe 918 Gene3D G3DSA:3.30.1490.20 533 610 1.3E-75 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 SYN_02878 ac1686b73bba78661d23ac80a00f8afe 918 Pfam PF00583 Acetyltransferase (GNAT) family 799 899 9.7E-13 T 11-10-2018 IPR000182 GNAT domain SYN_02878 ac1686b73bba78661d23ac80a00f8afe 918 Gene3D G3DSA:3.40.50.261 146 306 1.3E-61 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_00945 9718c380a7531000e2ad81b643f39dc9 487 Pfam PF04963 Sigma-54 factor, core binding domain 123 309 1.1E-57 T 11-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 SYN_00945 9718c380a7531000e2ad81b643f39dc9 487 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 465 472 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 SYN_00945 9718c380a7531000e2ad81b643f39dc9 487 Gene3D G3DSA:1.10.10.60 426 485 3.9E-23 T 11-10-2018 SYN_00945 9718c380a7531000e2ad81b643f39dc9 487 PIRSF PIRSF000774 1 487 1.5E-158 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 SYN_00945 9718c380a7531000e2ad81b643f39dc9 487 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 6 50 6.0E-16 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 SYN_00945 9718c380a7531000e2ad81b643f39dc9 487 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 374 393 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 SYN_00945 9718c380a7531000e2ad81b643f39dc9 487 PRINTS PR00045 Sigma-54 factor signature 195 212 7.9E-31 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 SYN_00945 9718c380a7531000e2ad81b643f39dc9 487 PRINTS PR00045 Sigma-54 factor signature 402 413 7.9E-31 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 SYN_00945 9718c380a7531000e2ad81b643f39dc9 487 PRINTS PR00045 Sigma-54 factor signature 460 478 7.9E-31 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 SYN_00945 9718c380a7531000e2ad81b643f39dc9 487 PRINTS PR00045 Sigma-54 factor signature 386 398 7.9E-31 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 SYN_00945 9718c380a7531000e2ad81b643f39dc9 487 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 484 6.1E-140 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 SYN_00945 9718c380a7531000e2ad81b643f39dc9 487 Pfam PF04552 Sigma-54, DNA binding domain 327 485 3.6E-67 T 11-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding SYN_00945 9718c380a7531000e2ad81b643f39dc9 487 Gene3D G3DSA:1.10.10.1330 128 255 2.9E-32 T 11-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily SYN_00530 705aa67380df7fb94485836e332918cf 285 SUPERFAMILY SSF53790 5 222 1.3E-80 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 SYN_00530 705aa67380df7fb94485836e332918cf 285 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 205 7.7E-30 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 SYN_00530 705aa67380df7fb94485836e332918cf 285 PIRSF PIRSF005917 1 280 1.7E-99 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 SYN_00530 705aa67380df7fb94485836e332918cf 285 Gene3D G3DSA:3.40.1010.10 1 113 1.0E-44 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 SYN_00530 705aa67380df7fb94485836e332918cf 285 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 6 224 37.571 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 SYN_00530 705aa67380df7fb94485836e332918cf 285 Gene3D G3DSA:3.30.950.10 114 228 7.8E-39 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 SYN_00530 705aa67380df7fb94485836e332918cf 285 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 84 95 - T 11-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 SYN_00530 705aa67380df7fb94485836e332918cf 285 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 7 239 1.2E-74 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 SYN_01698 3f24dad33de3fff30ee3809b823ea289 326 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 245 321 3.6E-17 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 SYN_01698 3f24dad33de3fff30ee3809b823ea289 326 Gene3D G3DSA:3.40.47.10 186 325 4.7E-20 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 SYN_01698 3f24dad33de3fff30ee3809b823ea289 326 SUPERFAMILY SSF53901 3 188 2.49E-31 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 SYN_01698 3f24dad33de3fff30ee3809b823ea289 326 SUPERFAMILY SSF53901 212 321 9.54E-22 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 SYN_01698 3f24dad33de3fff30ee3809b823ea289 326 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 124 202 6.8E-12 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 SYN_01698 3f24dad33de3fff30ee3809b823ea289 326 Gene3D G3DSA:3.40.47.10 2 185 8.6E-44 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 SYN_02705 5354d843899b8d08f000a7fb836c7ab8 267 PIRSF PIRSF003092 1 267 1.8E-90 T 11-10-2018 IPR025501 ATP binding protein MinD SYN_02705 5354d843899b8d08f000a7fb836c7ab8 267 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 264 4.5E-108 T 11-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 SYN_02705 5354d843899b8d08f000a7fb836c7ab8 267 Pfam PF13614 AAA domain 3 158 1.4E-21 T 11-10-2018 IPR025669 AAA domain SYN_02705 5354d843899b8d08f000a7fb836c7ab8 267 SUPERFAMILY SSF52540 2 253 5.57E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02705 5354d843899b8d08f000a7fb836c7ab8 267 Gene3D G3DSA:3.40.50.300 1 259 4.3E-72 T 11-10-2018 SYN_01153 e303e6619290d2ae327f527f0cdc1774 319 SUPERFAMILY SSF55729 90 253 8.78E-11 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase SYN_01293 558e946059230b4b883a347f152f2d0c 189 Pfam PF00881 Nitroreductase family 9 62 8.4E-9 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 SYN_01293 558e946059230b4b883a347f152f2d0c 189 Pfam PF00881 Nitroreductase family 101 151 3.9E-10 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 SYN_01293 558e946059230b4b883a347f152f2d0c 189 Gene3D G3DSA:3.40.109.10 1 154 2.1E-40 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SYN_01293 558e946059230b4b883a347f152f2d0c 189 Gene3D G3DSA:2.20.180.10 155 189 1.7E-17 T 11-10-2018 IPR023312 Putatuve nitroreductase, C-terminal, bacterial SYN_01293 558e946059230b4b883a347f152f2d0c 189 SUPERFAMILY SSF55469 1 187 4.84E-38 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SYN_00938 fb298a1f5b3b8abc19926f17f3cc6b81 450 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 367 441 6.5E-11 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_00938 fb298a1f5b3b8abc19926f17f3cc6b81 450 SUPERFAMILY SSF53738 251 358 9.03E-34 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_00938 fb298a1f5b3b8abc19926f17f3cc6b81 450 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 252 363 4.0E-27 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_00938 fb298a1f5b3b8abc19926f17f3cc6b81 450 Gene3D G3DSA:3.30.310.50 363 447 1.9E-26 T 11-10-2018 SYN_00938 fb298a1f5b3b8abc19926f17f3cc6b81 450 Gene3D G3DSA:3.40.120.10 166 243 1.3E-28 T 11-10-2018 SYN_00938 fb298a1f5b3b8abc19926f17f3cc6b81 450 Gene3D G3DSA:3.40.120.10 244 361 4.6E-40 T 11-10-2018 SYN_00938 fb298a1f5b3b8abc19926f17f3cc6b81 450 SUPERFAMILY SSF55957 361 443 3.01E-21 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_00938 fb298a1f5b3b8abc19926f17f3cc6b81 450 Gene3D G3DSA:3.40.120.10 1 146 1.6E-51 T 11-10-2018 SYN_00938 fb298a1f5b3b8abc19926f17f3cc6b81 450 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 94 103 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_00938 fb298a1f5b3b8abc19926f17f3cc6b81 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 93 107 6.2E-24 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_00938 fb298a1f5b3b8abc19926f17f3cc6b81 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 198 211 6.2E-24 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_00938 fb298a1f5b3b8abc19926f17f3cc6b81 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 227 242 6.2E-24 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_00938 fb298a1f5b3b8abc19926f17f3cc6b81 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 164 183 6.2E-24 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_00938 fb298a1f5b3b8abc19926f17f3cc6b81 450 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 247 4.1E-25 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_00938 fb298a1f5b3b8abc19926f17f3cc6b81 450 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 126 1.1E-32 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_00938 fb298a1f5b3b8abc19926f17f3cc6b81 450 SUPERFAMILY SSF53738 150 249 1.29E-29 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_00938 fb298a1f5b3b8abc19926f17f3cc6b81 450 SUPERFAMILY SSF53738 3 124 3.3E-38 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_00959 43ea88898180751a961acf095620bb57 303 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 223 240 - T 11-10-2018 IPR000540 Flagellar motor protein MotA, conserved site SYN_00959 43ea88898180751a961acf095620bb57 303 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 19 299 1.4E-116 T 11-10-2018 IPR022522 Flagellar motor stator, MotA SYN_00959 43ea88898180751a961acf095620bb57 303 Pfam PF01618 MotA/TolQ/ExbB proton channel family 156 233 1.4E-6 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel SYN_02945 af8d6f3fd6fb2d573b6e252ae9a18f95 401 Pfam PF01610 Transposase 153 388 1.3E-76 T 11-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SYN_02945 af8d6f3fd6fb2d573b6e252ae9a18f95 401 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 38 82 2.6E-8 T 11-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger SYN_03218 af8d6f3fd6fb2d573b6e252ae9a18f95 401 Pfam PF01610 Transposase 153 388 1.3E-76 T 11-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SYN_03218 af8d6f3fd6fb2d573b6e252ae9a18f95 401 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 38 82 2.6E-8 T 11-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger SYN_03074 af8d6f3fd6fb2d573b6e252ae9a18f95 401 Pfam PF01610 Transposase 153 388 1.3E-76 T 11-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SYN_03074 af8d6f3fd6fb2d573b6e252ae9a18f95 401 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 38 82 2.6E-8 T 11-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger SYN_03036 af8d6f3fd6fb2d573b6e252ae9a18f95 401 Pfam PF01610 Transposase 153 388 1.3E-76 T 11-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SYN_03036 af8d6f3fd6fb2d573b6e252ae9a18f95 401 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 38 82 2.6E-8 T 11-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger SYN_01127 2916a0e60c9c7617212c7de6cd237bff 1063 SUPERFAMILY SSF49299 323 415 9.42E-8 T 11-10-2018 IPR035986 PKD domain superfamily SYN_01127 2916a0e60c9c7617212c7de6cd237bff 1063 Gene3D G3DSA:2.60.40.10 601 694 2.9E-6 T 11-10-2018 IPR013783 Immunoglobulin-like fold SYN_01127 2916a0e60c9c7617212c7de6cd237bff 1063 Gene3D G3DSA:2.60.40.10 696 784 1.5E-6 T 11-10-2018 IPR013783 Immunoglobulin-like fold SYN_01127 2916a0e60c9c7617212c7de6cd237bff 1063 Gene3D G3DSA:2.120.10.30 88 284 2.1E-8 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like SYN_01127 2916a0e60c9c7617212c7de6cd237bff 1063 Gene3D G3DSA:2.60.40.10 785 875 3.8E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold SYN_01127 2916a0e60c9c7617212c7de6cd237bff 1063 SUPERFAMILY SSF101898 61 312 7.59E-12 T 11-10-2018 SYN_01127 2916a0e60c9c7617212c7de6cd237bff 1063 SUPERFAMILY SSF49299 969 1059 1.26E-5 T 11-10-2018 IPR035986 PKD domain superfamily SYN_01127 2916a0e60c9c7617212c7de6cd237bff 1063 SMART SM00089 327 417 0.17 T 11-10-2018 IPR022409 PKD/Chitinase domain SYN_01127 2916a0e60c9c7617212c7de6cd237bff 1063 SMART SM00089 979 1063 0.017 T 11-10-2018 IPR022409 PKD/Chitinase domain SYN_01127 2916a0e60c9c7617212c7de6cd237bff 1063 Gene3D G3DSA:2.60.40.10 325 419 4.1E-22 T 11-10-2018 IPR013783 Immunoglobulin-like fold SYN_01127 2916a0e60c9c7617212c7de6cd237bff 1063 Gene3D G3DSA:2.60.40.10 879 970 2.5E-6 T 11-10-2018 IPR013783 Immunoglobulin-like fold SYN_01127 2916a0e60c9c7617212c7de6cd237bff 1063 Gene3D G3DSA:2.60.40.10 971 1063 2.3E-19 T 11-10-2018 IPR013783 Immunoglobulin-like fold SYN_01127 2916a0e60c9c7617212c7de6cd237bff 1063 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 755 803 7.0E-4 T 11-10-2018 IPR010221 VCBS repeat SYN_01127 2916a0e60c9c7617212c7de6cd237bff 1063 SUPERFAMILY SSF49313 700 788 7.69E-5 T 11-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 SYN_02902 bb4c6e56a4e2cb0d0922f83d0a1d8124 357 Pfam PF01636 Phosphotransferase enzyme family 68 274 8.3E-18 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase SYN_02902 bb4c6e56a4e2cb0d0922f83d0a1d8124 357 Gene3D G3DSA:3.90.1200.10 116 353 4.6E-40 T 11-10-2018 SYN_02902 bb4c6e56a4e2cb0d0922f83d0a1d8124 357 SUPERFAMILY SSF56112 25 335 6.29E-32 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily SYN_01402 f8b337696bf45264a9a78b663c28c434 352 Gene3D G3DSA:2.40.50.140 271 332 4.6E-7 T 11-10-2018 SYN_01402 f8b337696bf45264a9a78b663c28c434 352 Pfam PF01938 TRAM domain 274 324 3.2E-5 T 11-10-2018 IPR002792 TRAM domain SYN_01402 f8b337696bf45264a9a78b663c28c434 352 SUPERFAMILY SSF88723 145 271 4.49E-24 T 11-10-2018 IPR029060 PIN-like domain superfamily SYN_01402 f8b337696bf45264a9a78b663c28c434 352 SMART SM00670 143 250 1.7E-10 T 11-10-2018 IPR002716 PIN domain SYN_01402 f8b337696bf45264a9a78b663c28c434 352 Gene3D G3DSA:3.40.50.1010 138 270 7.3E-54 T 11-10-2018 SYN_01023 293fb760714b35bc750337c61fe4094e 429 SUPERFAMILY SSF53335 88 425 3.69E-65 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_01023 293fb760714b35bc750337c61fe4094e 429 Gene3D G3DSA:3.40.50.150 95 162 5.6E-11 T 11-10-2018 SYN_01023 293fb760714b35bc750337c61fe4094e 429 Pfam PF01938 TRAM domain 25 78 4.9E-11 T 11-10-2018 IPR002792 TRAM domain SYN_01023 293fb760714b35bc750337c61fe4094e 429 SUPERFAMILY SSF50249 17 78 1.37E-13 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_01023 293fb760714b35bc750337c61fe4094e 429 Gene3D G3DSA:2.40.50.140 14 94 4.5E-21 T 11-10-2018 SYN_01023 293fb760714b35bc750337c61fe4094e 429 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 356 387 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site SYN_01023 293fb760714b35bc750337c61fe4094e 429 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 249 425 1.5E-18 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 SYN_01023 293fb760714b35bc750337c61fe4094e 429 Gene3D G3DSA:3.40.50.150 239 425 1.4E-59 T 11-10-2018 SYN_01023 293fb760714b35bc750337c61fe4094e 429 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 408 418 - T 11-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site SYN_00589 5f4f9f7e4dda96b6565f0d118d7ea1e9 196 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 11 191 26.539 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 SYN_00589 5f4f9f7e4dda96b6565f0d118d7ea1e9 196 Gene3D G3DSA:3.40.50.300 1 195 9.5E-53 T 11-10-2018 SYN_00589 5f4f9f7e4dda96b6565f0d118d7ea1e9 196 SUPERFAMILY SSF52540 18 189 5.06E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00589 5f4f9f7e4dda96b6565f0d118d7ea1e9 196 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 187 2.8E-66 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 SYN_00589 5f4f9f7e4dda96b6565f0d118d7ea1e9 196 Pfam PF01926 50S ribosome-binding GTPase 25 143 1.9E-22 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 SYN_03216 fde9a1ed8e40c36f68c07026717e4f89 243 Pfam PF02662 Methyl-viologen-reducing hydrogenase, delta subunit 1 97 8.8E-32 T 11-10-2018 IPR003813 F420-non-reducing hydrogenase iron-sulfur subunit D GO:0055114 SYN_03216 fde9a1ed8e40c36f68c07026717e4f89 243 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 168 179 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_03216 fde9a1ed8e40c36f68c07026717e4f89 243 Pfam PF00037 4Fe-4S binding domain 192 209 9.6E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_03216 fde9a1ed8e40c36f68c07026717e4f89 243 Pfam PF00037 4Fe-4S binding domain 161 183 3.9E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_03216 fde9a1ed8e40c36f68c07026717e4f89 243 SUPERFAMILY SSF54862 157 210 3.62E-17 T 11-10-2018 SYN_03216 fde9a1ed8e40c36f68c07026717e4f89 243 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 198 209 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_03216 fde9a1ed8e40c36f68c07026717e4f89 243 Gene3D G3DSA:3.30.70.20 155 218 2.1E-13 T 11-10-2018 SYN_00256 fde9a1ed8e40c36f68c07026717e4f89 243 Pfam PF02662 Methyl-viologen-reducing hydrogenase, delta subunit 1 97 8.8E-32 T 11-10-2018 IPR003813 F420-non-reducing hydrogenase iron-sulfur subunit D GO:0055114 SYN_00256 fde9a1ed8e40c36f68c07026717e4f89 243 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 168 179 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_00256 fde9a1ed8e40c36f68c07026717e4f89 243 Pfam PF00037 4Fe-4S binding domain 192 209 9.6E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_00256 fde9a1ed8e40c36f68c07026717e4f89 243 Pfam PF00037 4Fe-4S binding domain 161 183 3.9E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_00256 fde9a1ed8e40c36f68c07026717e4f89 243 SUPERFAMILY SSF54862 157 210 3.62E-17 T 11-10-2018 SYN_00256 fde9a1ed8e40c36f68c07026717e4f89 243 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 198 209 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_00256 fde9a1ed8e40c36f68c07026717e4f89 243 Gene3D G3DSA:3.30.70.20 155 218 2.1E-13 T 11-10-2018 SYN_00045 905e7ab3046d112684343e03074ce7ef 110 SUPERFAMILY SSF52833 5 109 4.76E-40 T 11-10-2018 IPR036249 Thioredoxin-like superfamily SYN_00045 905e7ab3046d112684343e03074ce7ef 110 PIRSF PIRSF000077 4 110 2.2E-42 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SYN_00045 905e7ab3046d112684343e03074ce7ef 110 TIGRFAM TIGR01068 thioredoxin: thioredoxin 11 109 8.0E-39 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SYN_00045 905e7ab3046d112684343e03074ce7ef 110 PRINTS PR00421 Thioredoxin family signature 26 34 4.3E-9 T 11-10-2018 SYN_00045 905e7ab3046d112684343e03074ce7ef 110 PRINTS PR00421 Thioredoxin family signature 74 85 4.3E-9 T 11-10-2018 SYN_00045 905e7ab3046d112684343e03074ce7ef 110 PRINTS PR00421 Thioredoxin family signature 34 43 4.3E-9 T 11-10-2018 SYN_00045 905e7ab3046d112684343e03074ce7ef 110 Pfam PF00085 Thioredoxin 8 108 2.7E-34 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 SYN_00045 905e7ab3046d112684343e03074ce7ef 110 Gene3D G3DSA:3.40.30.10 1 110 2.0E-37 T 11-10-2018 SYN_00045 905e7ab3046d112684343e03074ce7ef 110 ProSitePatterns PS00194 Thioredoxin family active site. 27 45 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 SYN_02856 cf59d5cd4545d76eb2e7db03b3437bf6 251 Gene3D G3DSA:3.30.70.580 66 224 1.5E-53 T 11-10-2018 SYN_02856 cf59d5cd4545d76eb2e7db03b3437bf6 251 SMART SM00363 3 72 9.8E-11 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_02856 cf59d5cd4545d76eb2e7db03b3437bf6 251 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 69 227 4.8E-45 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SYN_02856 cf59d5cd4545d76eb2e7db03b3437bf6 251 Gene3D G3DSA:3.10.290.10 1 59 6.1E-22 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 SYN_02856 cf59d5cd4545d76eb2e7db03b3437bf6 251 Gene3D G3DSA:3.30.70.1560 126 216 1.5E-53 T 11-10-2018 SYN_02856 cf59d5cd4545d76eb2e7db03b3437bf6 251 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 SYN_02856 cf59d5cd4545d76eb2e7db03b3437bf6 251 SUPERFAMILY SSF55120 61 233 1.08E-40 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 SYN_02856 cf59d5cd4545d76eb2e7db03b3437bf6 251 Pfam PF01479 S4 domain 3 44 1.0E-11 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_02856 cf59d5cd4545d76eb2e7db03b3437bf6 251 SUPERFAMILY SSF55174 2 68 1.23E-13 T 11-10-2018 SYN_02856 cf59d5cd4545d76eb2e7db03b3437bf6 251 Pfam PF00849 RNA pseudouridylate synthase 65 197 7.1E-15 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SYN_01865 501fd1759685ca7f90743c45630517d3 844 Pfam PF12846 AAA-like domain 455 733 5.5E-10 T 11-10-2018 SYN_01865 501fd1759685ca7f90743c45630517d3 844 Gene3D G3DSA:3.40.50.300 445 759 1.3E-40 T 11-10-2018 SYN_01865 501fd1759685ca7f90743c45630517d3 844 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 41 261 3.0E-54 T 11-10-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase SYN_01865 501fd1759685ca7f90743c45630517d3 844 SUPERFAMILY SSF52540 419 778 1.2E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01865 501fd1759685ca7f90743c45630517d3 844 Gene3D G3DSA:1.10.8.730 510 647 1.3E-40 T 11-10-2018 SYN_01431 abbc5f720be2864370f6bb2b7020b630 448 Pfam PF13533 Biotin-lipoyl like 100 126 6.3E-8 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain SYN_01431 abbc5f720be2864370f6bb2b7020b630 448 PIRSF PIRSF015658 2 448 1.3E-154 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 SYN_01431 abbc5f720be2864370f6bb2b7020b630 448 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 17 446 1.1E-147 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 SYN_01431 abbc5f720be2864370f6bb2b7020b630 448 Gene3D G3DSA:2.40.50.100 64 127 2.6E-9 T 11-10-2018 SYN_01431 abbc5f720be2864370f6bb2b7020b630 448 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 16 442 9.8E-142 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 SYN_01431 abbc5f720be2864370f6bb2b7020b630 448 SUPERFAMILY SSF51230 62 126 1.86E-8 T 11-10-2018 IPR011053 Single hybrid motif SYN_02870 2c400a5b535d61c831618f58d9c2c96a 436 Gene3D G3DSA:3.40.800.20 6 338 4.9E-78 T 11-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 SYN_02870 2c400a5b535d61c831618f58d9c2c96a 436 SUPERFAMILY SSF52768 5 317 1.29E-86 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily SYN_02870 2c400a5b535d61c831618f58d9c2c96a 436 PRINTS PR01270 Histone deacetylase superfamily signature 229 239 7.7E-7 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 SYN_02870 2c400a5b535d61c831618f58d9c2c96a 436 PRINTS PR01270 Histone deacetylase superfamily signature 109 132 7.7E-7 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 SYN_02870 2c400a5b535d61c831618f58d9c2c96a 436 PRINTS PR01270 Histone deacetylase superfamily signature 143 158 7.7E-7 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 SYN_02870 2c400a5b535d61c831618f58d9c2c96a 436 Pfam PF00850 Histone deacetylase domain 75 278 1.7E-59 T 11-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 SYN_02768 9a8224ac565a466a84e244e017d56d2f 200 Gene3D G3DSA:2.170.120.20 101 195 6.2E-23 T 11-10-2018 IPR037121 Ribosomal protein L25, C-terminal SYN_02768 9a8224ac565a466a84e244e017d56d2f 200 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 5 97 5.0E-15 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 SYN_02768 9a8224ac565a466a84e244e017d56d2f 200 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 184 9.0E-47 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 SYN_02768 9a8224ac565a466a84e244e017d56d2f 200 Pfam PF01386 Ribosomal L25p family 6 96 4.9E-23 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 SYN_02768 9a8224ac565a466a84e244e017d56d2f 200 SUPERFAMILY SSF50715 10 184 2.96E-49 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 SYN_02768 9a8224ac565a466a84e244e017d56d2f 200 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 106 185 1.2E-22 T 11-10-2018 IPR020057 Ribosomal protein L25, beta domain SYN_02768 9a8224ac565a466a84e244e017d56d2f 200 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 187 27.054 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 SYN_02768 9a8224ac565a466a84e244e017d56d2f 200 Gene3D G3DSA:2.40.240.10 4 99 1.8E-23 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 SYN_02474 bd59cfd9796110362d637c74cc840472 224 TIGRFAM TIGR00372 cas4: CRISPR-associated protein Cas4 23 204 3.0E-44 T 11-10-2018 IPR013343 CRISPR-associated protein Cas4 SYN_02474 bd59cfd9796110362d637c74cc840472 224 Gene3D G3DSA:3.90.320.10 18 204 1.3E-10 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal SYN_02474 bd59cfd9796110362d637c74cc840472 224 Pfam PF01930 Domain of unknown function DUF83 25 204 4.1E-36 T 11-10-2018 IPR022765 Dna2/Cas4, domain of unknown function DUF83 SYN_01476 034f82e9bdfb8f1bdcfa5050f828d1ff 302 Pfam PF00196 Bacterial regulatory proteins, luxR family 231 279 2.7E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_01476 034f82e9bdfb8f1bdcfa5050f828d1ff 302 SUPERFAMILY SSF46894 216 279 8.5E-13 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SYN_01476 034f82e9bdfb8f1bdcfa5050f828d1ff 302 SMART SM00421 229 287 6.6E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_01476 034f82e9bdfb8f1bdcfa5050f828d1ff 302 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 232 246 5.9E-7 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_01476 034f82e9bdfb8f1bdcfa5050f828d1ff 302 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 246 262 5.9E-7 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_01476 034f82e9bdfb8f1bdcfa5050f828d1ff 302 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 262 274 5.9E-7 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_01476 034f82e9bdfb8f1bdcfa5050f828d1ff 302 Gene3D G3DSA:1.10.10.10 199 292 2.0E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_02063 34dd2ad4e5d605be65885ea1b5640457 331 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 36 329 6.9E-104 T 11-10-2018 IPR018707 Protein of unknown function DUF2219 SYN_02063 34dd2ad4e5d605be65885ea1b5640457 331 Gene3D G3DSA:2.40.128.140 27 331 1.2E-89 T 11-10-2018 IPR037107 Putative outer membrane protein superfamily SYN_02228 a358fe147d353af29e78698eecb7211a 86 Pfam PF04221 RelB antitoxin 5 83 6.3E-17 T 11-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ SYN_02228 a358fe147d353af29e78698eecb7211a 86 Gene3D G3DSA:1.10.1220.10 4 83 3.9E-9 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 SYN_02228 a358fe147d353af29e78698eecb7211a 86 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 82 1.9E-17 T 11-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ SYN_02228 a358fe147d353af29e78698eecb7211a 86 PIRSF PIRSF003108 1 86 2.5E-30 T 11-10-2018 IPR026262 Antitoxin DinJ GO:0000986|GO:0015643|GO:0044010 SYN_02028 8a42e43952f317696af71406382b4bc6 343 Pfam PF00154 recA bacterial DNA recombination protein 9 271 1.9E-141 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SYN_02028 8a42e43952f317696af71406382b4bc6 343 SMART SM00382 60 231 4.4E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_02028 8a42e43952f317696af71406382b4bc6 343 Gene3D G3DSA:3.40.50.300 29 270 7.1E-81 T 11-10-2018 SYN_02028 8a42e43952f317696af71406382b4bc6 343 Hamap MF_00268 Protein RecA [recA]. 7 332 52.066 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SYN_02028 8a42e43952f317696af71406382b4bc6 343 ProSitePatterns PS00321 recA signature. 216 224 - T 11-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 SYN_02028 8a42e43952f317696af71406382b4bc6 343 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 6 326 7.9E-172 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SYN_02028 8a42e43952f317696af71406382b4bc6 343 SUPERFAMILY SSF54752 271 328 6.15E-21 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal SYN_02028 8a42e43952f317696af71406382b4bc6 343 Gene3D G3DSA:3.30.250.10 271 343 2.5E-26 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal SYN_02028 8a42e43952f317696af71406382b4bc6 343 PRINTS PR00142 RecA protein signature 130 159 7.7E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SYN_02028 8a42e43952f317696af71406382b4bc6 343 PRINTS PR00142 RecA protein signature 213 241 7.7E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SYN_02028 8a42e43952f317696af71406382b4bc6 343 PRINTS PR00142 RecA protein signature 246 275 7.7E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SYN_02028 8a42e43952f317696af71406382b4bc6 343 PRINTS PR00142 RecA protein signature 300 317 7.7E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SYN_02028 8a42e43952f317696af71406382b4bc6 343 PRINTS PR00142 RecA protein signature 96 125 7.7E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SYN_02028 8a42e43952f317696af71406382b4bc6 343 PRINTS PR00142 RecA protein signature 168 197 7.7E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SYN_02028 8a42e43952f317696af71406382b4bc6 343 SUPERFAMILY SSF52540 8 270 7.72E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00725 e33beb4cabe85bc2c10066ca2812ab6d 218 Gene3D G3DSA:1.10.287.110 12 101 7.7E-18 T 11-10-2018 IPR036869 Chaperone J-domain superfamily SYN_00725 e33beb4cabe85bc2c10066ca2812ab6d 218 Pfam PF00226 DnaJ domain 23 83 1.0E-15 T 11-10-2018 IPR001623 DnaJ domain SYN_00725 e33beb4cabe85bc2c10066ca2812ab6d 218 SMART SM00271 22 78 1.3E-13 T 11-10-2018 IPR001623 DnaJ domain SYN_00725 e33beb4cabe85bc2c10066ca2812ab6d 218 SUPERFAMILY SSF46565 19 90 6.02E-19 T 11-10-2018 IPR036869 Chaperone J-domain superfamily SYN_01960 292b0f40c16932e1d5b32e747bbc1c9c 329 SMART SM00729 13 217 2.0E-12 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SYN_01960 292b0f40c16932e1d5b32e747bbc1c9c 329 Gene3D G3DSA:3.20.20.70 1 329 2.7E-100 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_01960 292b0f40c16932e1d5b32e747bbc1c9c 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 185 311 7.5E-41 T 11-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_01960 292b0f40c16932e1d5b32e747bbc1c9c 329 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 19 30 - T 11-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_01960 292b0f40c16932e1d5b32e747bbc1c9c 329 Pfam PF04055 Radical SAM superfamily 17 178 9.8E-31 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_01960 292b0f40c16932e1d5b32e747bbc1c9c 329 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 4 329 40.671 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_01960 292b0f40c16932e1d5b32e747bbc1c9c 329 Pfam PF13353 4Fe-4S single cluster domain 21 128 4.8E-9 T 11-10-2018 SYN_01960 292b0f40c16932e1d5b32e747bbc1c9c 329 SUPERFAMILY SSF102114 6 277 1.27E-78 T 11-10-2018 SYN_01960 292b0f40c16932e1d5b32e747bbc1c9c 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 4 329 8.2E-115 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_03145 87a31693dc9bf2bd19054268db4d359e 201 Gene3D G3DSA:1.10.286.20 111 155 1.8E-58 T 11-10-2018 SYN_03145 87a31693dc9bf2bd19054268db4d359e 201 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 92 201 6.4E-32 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SYN_03145 87a31693dc9bf2bd19054268db4d359e 201 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 2 94 5.5E-35 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SYN_03145 87a31693dc9bf2bd19054268db4d359e 201 ProSitePatterns PS01127 Elongation factor Ts signature 2. 76 86 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SYN_03145 87a31693dc9bf2bd19054268db4d359e 201 Hamap MF_00050 Elongation factor Ts [tsf]. 1 201 45.883 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SYN_03145 87a31693dc9bf2bd19054268db4d359e 201 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SYN_03145 87a31693dc9bf2bd19054268db4d359e 201 Pfam PF00889 Elongation factor TS 49 197 2.1E-43 T 11-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 SYN_03145 87a31693dc9bf2bd19054268db4d359e 201 SUPERFAMILY SSF46934 3 53 3.3E-18 T 11-10-2018 IPR009060 UBA-like superfamily GO:0005515 SYN_03145 87a31693dc9bf2bd19054268db4d359e 201 SUPERFAMILY SSF54713 56 197 8.11E-54 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 SYN_03145 87a31693dc9bf2bd19054268db4d359e 201 Gene3D G3DSA:1.10.8.10 1 54 2.3E-25 T 11-10-2018 SYN_03145 87a31693dc9bf2bd19054268db4d359e 201 Gene3D G3DSA:3.30.479.20 59 196 1.8E-58 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 SYN_01198 23ee427b337f970865a00aad98658d34 198 SUPERFAMILY SSF53323 6 194 2.22E-44 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 SYN_01198 23ee427b337f970865a00aad98658d34 198 Gene3D G3DSA:3.40.920.10 4 197 6.2E-51 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 SYN_01198 23ee427b337f970865a00aad98658d34 198 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 16 192 9.3E-37 T 11-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SYN_00546 4abdab974632ca953b1dcd539da01225 504 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 372 497 8.3E-51 T 11-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00546 4abdab974632ca953b1dcd539da01225 504 Gene3D G3DSA:1.20.150.20 373 501 5.5E-53 T 11-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00546 4abdab974632ca953b1dcd539da01225 504 Gene3D G3DSA:2.40.30.20 2 94 3.4E-36 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SYN_00546 4abdab974632ca953b1dcd539da01225 504 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 365 8.3E-72 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SYN_00546 4abdab974632ca953b1dcd539da01225 504 SUPERFAMILY SSF47917 374 499 3.66E-47 T 11-10-2018 SYN_00546 4abdab974632ca953b1dcd539da01225 504 Gene3D G3DSA:3.40.50.300 95 372 2.3E-123 T 11-10-2018 SYN_00546 4abdab974632ca953b1dcd539da01225 504 PIRSF PIRSF039088 2 503 4.5E-253 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00546 4abdab974632ca953b1dcd539da01225 504 SUPERFAMILY SSF52540 97 371 7.5E-97 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00546 4abdab974632ca953b1dcd539da01225 504 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 26 93 5.4E-19 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SYN_00546 4abdab974632ca953b1dcd539da01225 504 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 2 502 50.101 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00546 4abdab974632ca953b1dcd539da01225 504 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 4 502 1.5E-247 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00546 4abdab974632ca953b1dcd539da01225 504 SUPERFAMILY SSF50615 11 95 3.92E-29 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SYN_00546 4abdab974632ca953b1dcd539da01225 504 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 356 365 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SYN_00527 f6bb95bedc0af97c0a3bc3260a386e89 506 Gene3D G3DSA:2.30.42.10 286 393 1.7E-29 T 11-10-2018 SYN_00527 f6bb95bedc0af97c0a3bc3260a386e89 506 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 58 487 9.5E-152 T 11-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 SYN_00527 f6bb95bedc0af97c0a3bc3260a386e89 506 Pfam PF13180 PDZ domain 291 379 2.9E-16 T 11-10-2018 IPR001478 PDZ domain GO:0005515 SYN_00527 f6bb95bedc0af97c0a3bc3260a386e89 506 Pfam PF13180 PDZ domain 400 481 9.9E-11 T 11-10-2018 IPR001478 PDZ domain GO:0005515 SYN_00527 f6bb95bedc0af97c0a3bc3260a386e89 506 SUPERFAMILY SSF50494 56 283 3.32E-71 T 11-10-2018 IPR009003 Peptidase S1, PA clan SYN_00527 f6bb95bedc0af97c0a3bc3260a386e89 506 SMART SM00228 291 373 7.4E-14 T 11-10-2018 IPR001478 PDZ domain GO:0005515 SYN_00527 f6bb95bedc0af97c0a3bc3260a386e89 506 SMART SM00228 399 481 1.1E-8 T 11-10-2018 IPR001478 PDZ domain GO:0005515 SYN_00527 f6bb95bedc0af97c0a3bc3260a386e89 506 PRINTS PR00834 HtrA/DegQ protease family signature 248 265 7.3E-52 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SYN_00527 f6bb95bedc0af97c0a3bc3260a386e89 506 PRINTS PR00834 HtrA/DegQ protease family signature 151 171 7.3E-52 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SYN_00527 f6bb95bedc0af97c0a3bc3260a386e89 506 PRINTS PR00834 HtrA/DegQ protease family signature 331 343 7.3E-52 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SYN_00527 f6bb95bedc0af97c0a3bc3260a386e89 506 PRINTS PR00834 HtrA/DegQ protease family signature 226 243 7.3E-52 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SYN_00527 f6bb95bedc0af97c0a3bc3260a386e89 506 PRINTS PR00834 HtrA/DegQ protease family signature 130 142 7.3E-52 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SYN_00527 f6bb95bedc0af97c0a3bc3260a386e89 506 PRINTS PR00834 HtrA/DegQ protease family signature 192 216 7.3E-52 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SYN_00527 f6bb95bedc0af97c0a3bc3260a386e89 506 SUPERFAMILY SSF50156 272 379 1.31E-23 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 SYN_00527 f6bb95bedc0af97c0a3bc3260a386e89 506 Gene3D G3DSA:2.40.10.120 57 284 1.2E-84 T 11-10-2018 SYN_00527 f6bb95bedc0af97c0a3bc3260a386e89 506 SUPERFAMILY SSF50156 399 489 1.71E-18 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 SYN_00527 f6bb95bedc0af97c0a3bc3260a386e89 506 Pfam PF13365 Trypsin-like peptidase domain 121 255 2.1E-36 T 11-10-2018 SYN_00527 f6bb95bedc0af97c0a3bc3260a386e89 506 Gene3D G3DSA:2.30.42.10 398 496 1.8E-19 T 11-10-2018 SYN_01497 168a78a23773060330c7030fb5e2734f 442 Pfam PF00437 Type II/IV secretion system protein 88 364 6.2E-82 T 11-10-2018 IPR001482 Type II/IV secretion system protein SYN_01497 168a78a23773060330c7030fb5e2734f 442 SMART SM00382 212 367 0.004 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01497 168a78a23773060330c7030fb5e2734f 442 Gene3D G3DSA:3.30.450.380 4 183 2.5E-43 T 11-10-2018 SYN_01497 168a78a23773060330c7030fb5e2734f 442 SUPERFAMILY SSF52540 69 403 3.32E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01497 168a78a23773060330c7030fb5e2734f 442 Gene3D G3DSA:3.40.50.300 184 421 6.2E-71 T 11-10-2018 SYN_00567 4a1925f1aa06b8604df14930bd2886f4 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 89 134 4.8E-12 T 11-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain SYN_00567 4a1925f1aa06b8604df14930bd2886f4 404 Pfam PF01610 Transposase 153 392 7.8E-77 T 11-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SYN_01637 4a1925f1aa06b8604df14930bd2886f4 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 89 134 4.8E-12 T 11-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain SYN_01637 4a1925f1aa06b8604df14930bd2886f4 404 Pfam PF01610 Transposase 153 392 7.8E-77 T 11-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SYN_03249 4a1925f1aa06b8604df14930bd2886f4 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 89 134 4.8E-12 T 11-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain SYN_03249 4a1925f1aa06b8604df14930bd2886f4 404 Pfam PF01610 Transposase 153 392 7.8E-77 T 11-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SYN_01649 a3bf4959c2a66ffd34e147dbed90f1dc 194 SUPERFAMILY SSF54292 4 119 7.26E-29 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 SYN_01649 a3bf4959c2a66ffd34e147dbed90f1dc 194 Gene3D G3DSA:3.10.20.740 4 117 2.4E-32 T 11-10-2018 SYN_01649 a3bf4959c2a66ffd34e147dbed90f1dc 194 SUPERFAMILY SSF54862 116 182 3.87E-11 T 11-10-2018 SYN_01649 a3bf4959c2a66ffd34e147dbed90f1dc 194 Gene3D G3DSA:3.30.70.20 118 192 4.3E-9 T 11-10-2018 SYN_01649 a3bf4959c2a66ffd34e147dbed90f1dc 194 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 4 80 1.2E-17 T 11-10-2018 SYN_01649 a3bf4959c2a66ffd34e147dbed90f1dc 194 Pfam PF12838 4Fe-4S dicluster domain 125 180 3.4E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_01649 a3bf4959c2a66ffd34e147dbed90f1dc 194 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 166 177 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_01099 43a3ed0364ac7794ab14ef8480518c7a 390 Gene3D G3DSA:3.40.50.2000 212 368 2.6E-42 T 11-10-2018 SYN_01099 43a3ed0364ac7794ab14ef8480518c7a 390 SUPERFAMILY SSF53756 5 388 3.14E-71 T 11-10-2018 SYN_01099 43a3ed0364ac7794ab14ef8480518c7a 390 Pfam PF13579 Glycosyl transferase 4-like domain 64 203 6.6E-10 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 SYN_01099 43a3ed0364ac7794ab14ef8480518c7a 390 Pfam PF00534 Glycosyl transferases group 1 212 365 6.5E-30 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 SYN_01222 a5e4ab4e1f10250133561eccec078b91 209 Pfam PF13426 PAS domain 22 121 3.5E-6 T 11-10-2018 IPR000014 PAS domain SYN_01222 a5e4ab4e1f10250133561eccec078b91 209 SMART SM00091 12 78 0.033 T 11-10-2018 IPR000014 PAS domain SYN_01222 a5e4ab4e1f10250133561eccec078b91 209 SMART SM00091 134 200 1.1E-9 T 11-10-2018 IPR000014 PAS domain SYN_01222 a5e4ab4e1f10250133561eccec078b91 209 Gene3D G3DSA:3.30.450.20 2 122 9.0E-14 T 11-10-2018 SYN_01222 a5e4ab4e1f10250133561eccec078b91 209 SUPERFAMILY SSF55785 10 109 1.17E-14 T 11-10-2018 IPR035965 PAS domain superfamily SYN_01222 a5e4ab4e1f10250133561eccec078b91 209 SUPERFAMILY SSF55785 119 197 7.68E-19 T 11-10-2018 IPR035965 PAS domain superfamily SYN_01222 a5e4ab4e1f10250133561eccec078b91 209 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 130 199 2.4E-16 T 11-10-2018 IPR000014 PAS domain SYN_01222 a5e4ab4e1f10250133561eccec078b91 209 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 9 126 3.6E-9 T 11-10-2018 IPR000014 PAS domain SYN_01222 a5e4ab4e1f10250133561eccec078b91 209 Pfam PF00989 PAS fold 135 187 3.3E-9 T 11-10-2018 IPR013767 PAS fold GO:0006355 SYN_01222 a5e4ab4e1f10250133561eccec078b91 209 Gene3D G3DSA:3.30.450.20 123 205 6.1E-18 T 11-10-2018 SYN_02371 aa967cc23b976d916d0a2e03b1d96f27 414 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 19 213 6.8E-76 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SYN_02371 aa967cc23b976d916d0a2e03b1d96f27 414 Pfam PF00925 GTP cyclohydrolase II 222 388 1.8E-77 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 SYN_02371 aa967cc23b976d916d0a2e03b1d96f27 414 PIRSF PIRSF001259 15 414 3.8E-181 T 11-10-2018 SYN_02371 aa967cc23b976d916d0a2e03b1d96f27 414 Hamap MF_01283 Riboflavin biosynthesis protein RibBA [ribBA]. 16 410 53.443 T 11-10-2018 IPR016299 Riboflavin biosynthesis protein RibBA GO:0009231 KEGG: 00740+3.5.4.25+4.1.99.12|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 SYN_02371 aa967cc23b976d916d0a2e03b1d96f27 414 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 218 414 40.224 T 11-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 SYN_02371 aa967cc23b976d916d0a2e03b1d96f27 414 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 21 211 8.6E-85 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SYN_02371 aa967cc23b976d916d0a2e03b1d96f27 414 Gene3D G3DSA:3.40.50.10990 220 391 3.3E-77 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 SYN_02371 aa967cc23b976d916d0a2e03b1d96f27 414 SUPERFAMILY SSF142695 218 391 3.14E-75 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 SYN_02371 aa967cc23b976d916d0a2e03b1d96f27 414 SUPERFAMILY SSF55821 15 217 4.81E-88 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily SYN_02371 aa967cc23b976d916d0a2e03b1d96f27 414 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 223 412 5.5E-81 T 11-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 SYN_02371 aa967cc23b976d916d0a2e03b1d96f27 414 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 15 217 40.182 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SYN_02371 aa967cc23b976d916d0a2e03b1d96f27 414 Gene3D G3DSA:3.90.870.10 4 219 1.5E-88 T 11-10-2018 SYN_03124 d08b2e6e3fffa8ae596b5b0e68be72bf 238 SUPERFAMILY SSF117916 1 78 2.88E-20 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily SYN_03124 d08b2e6e3fffa8ae596b5b0e68be72bf 238 Gene3D G3DSA:3.30.300.130 3 88 6.9E-19 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily SYN_03124 d08b2e6e3fffa8ae596b5b0e68be72bf 238 Gene3D G3DSA:3.40.50.300 95 211 1.6E-36 T 11-10-2018 SYN_03124 d08b2e6e3fffa8ae596b5b0e68be72bf 238 Pfam PF01883 Iron-sulfur cluster assembly protein 4 76 6.6E-17 T 11-10-2018 IPR002744 MIP18 family-like SYN_03124 d08b2e6e3fffa8ae596b5b0e68be72bf 238 SUPERFAMILY SSF52540 92 211 4.72E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_03124 d08b2e6e3fffa8ae596b5b0e68be72bf 238 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 99 211 1.3E-44 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 SYN_02273 0f416e7eac85706f56ce784b70d37c1c 306 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 222 290 4.1E-18 T 11-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SYN_02273 0f416e7eac85706f56ce784b70d37c1c 306 Gene3D G3DSA:3.40.190.10 98 197 5.3E-82 T 11-10-2018 SYN_02273 0f416e7eac85706f56ce784b70d37c1c 306 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 1 292 36.686 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SYN_02273 0f416e7eac85706f56ce784b70d37c1c 306 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 1 208 1.6E-76 T 11-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SYN_02273 0f416e7eac85706f56ce784b70d37c1c 306 PIRSF PIRSF001438 1 305 6.1E-115 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SYN_02273 0f416e7eac85706f56ce784b70d37c1c 306 PRINTS PR00151 Porphobilinogen deaminase signature 138 155 2.1E-42 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SYN_02273 0f416e7eac85706f56ce784b70d37c1c 306 PRINTS PR00151 Porphobilinogen deaminase signature 225 242 2.1E-42 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SYN_02273 0f416e7eac85706f56ce784b70d37c1c 306 PRINTS PR00151 Porphobilinogen deaminase signature 71 90 2.1E-42 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SYN_02273 0f416e7eac85706f56ce784b70d37c1c 306 PRINTS PR00151 Porphobilinogen deaminase signature 119 136 2.1E-42 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SYN_02273 0f416e7eac85706f56ce784b70d37c1c 306 PRINTS PR00151 Porphobilinogen deaminase signature 40 60 2.1E-42 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SYN_02273 0f416e7eac85706f56ce784b70d37c1c 306 SUPERFAMILY SSF54782 216 301 3.66E-24 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SYN_02273 0f416e7eac85706f56ce784b70d37c1c 306 Gene3D G3DSA:3.40.190.10 1 205 5.3E-82 T 11-10-2018 SYN_02273 0f416e7eac85706f56ce784b70d37c1c 306 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 1 291 1.2E-106 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SYN_02273 0f416e7eac85706f56ce784b70d37c1c 306 Gene3D G3DSA:3.30.160.40 216 301 1.9E-23 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SYN_02273 0f416e7eac85706f56ce784b70d37c1c 306 SUPERFAMILY SSF53850 1 212 1.88E-75 T 11-10-2018 SYN_00414 27900b0628012d587afb6e7a63b1de0c 394 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 3 363 1.1E-81 T 11-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 SYN_00414 27900b0628012d587afb6e7a63b1de0c 394 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 362 2.1E-85 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 SYN_00677 c2b6edabfca9220a2f5a2cd64ff2bd82 399 Gene3D G3DSA:1.25.40.10 238 398 5.4E-59 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00677 c2b6edabfca9220a2f5a2cd64ff2bd82 399 SUPERFAMILY SSF48452 108 230 1.55E-28 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00677 c2b6edabfca9220a2f5a2cd64ff2bd82 399 Gene3D G3DSA:1.25.40.10 19 191 9.6E-63 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00677 c2b6edabfca9220a2f5a2cd64ff2bd82 399 SUPERFAMILY SSF48452 236 385 6.26E-30 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00677 c2b6edabfca9220a2f5a2cd64ff2bd82 399 Pfam PF13374 Tetratricopeptide repeat 197 235 4.4E-10 T 11-10-2018 SYN_00677 c2b6edabfca9220a2f5a2cd64ff2bd82 399 Gene3D G3DSA:1.25.40.10 192 236 8.1E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00677 c2b6edabfca9220a2f5a2cd64ff2bd82 399 Pfam PF13424 Tetratricopeptide repeat 323 396 1.9E-16 T 11-10-2018 SYN_00677 c2b6edabfca9220a2f5a2cd64ff2bd82 399 Pfam PF13424 Tetratricopeptide repeat 239 314 6.4E-24 T 11-10-2018 SYN_00677 c2b6edabfca9220a2f5a2cd64ff2bd82 399 Pfam PF13424 Tetratricopeptide repeat 40 104 1.1E-17 T 11-10-2018 SYN_00677 c2b6edabfca9220a2f5a2cd64ff2bd82 399 Pfam PF13424 Tetratricopeptide repeat 112 188 6.8E-25 T 11-10-2018 SYN_00677 c2b6edabfca9220a2f5a2cd64ff2bd82 399 SMART SM00028 324 357 2.5E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00677 c2b6edabfca9220a2f5a2cd64ff2bd82 399 SMART SM00028 282 315 0.0091 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00677 c2b6edabfca9220a2f5a2cd64ff2bd82 399 SMART SM00028 198 231 0.0098 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00677 c2b6edabfca9220a2f5a2cd64ff2bd82 399 SMART SM00028 240 273 0.26 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00677 c2b6edabfca9220a2f5a2cd64ff2bd82 399 SMART SM00028 114 147 0.0054 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00677 c2b6edabfca9220a2f5a2cd64ff2bd82 399 SMART SM00028 30 63 19.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00677 c2b6edabfca9220a2f5a2cd64ff2bd82 399 SMART SM00028 72 105 0.43 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00677 c2b6edabfca9220a2f5a2cd64ff2bd82 399 SMART SM00028 156 189 2.1E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00677 c2b6edabfca9220a2f5a2cd64ff2bd82 399 PRINTS PR00381 Kinesin light chain signature 194 211 3.5E-14 T 11-10-2018 IPR002151 Kinesin light chain GO:0003777|GO:0005871 Reactome: R-HSA-2132295|Reactome: R-HSA-5625970|Reactome: R-HSA-6811434|Reactome: R-HSA-983189 SYN_00677 c2b6edabfca9220a2f5a2cd64ff2bd82 399 PRINTS PR00381 Kinesin light chain signature 273 294 3.5E-14 T 11-10-2018 IPR002151 Kinesin light chain GO:0003777|GO:0005871 Reactome: R-HSA-2132295|Reactome: R-HSA-5625970|Reactome: R-HSA-6811434|Reactome: R-HSA-983189 SYN_00677 c2b6edabfca9220a2f5a2cd64ff2bd82 399 PRINTS PR00381 Kinesin light chain signature 129 147 3.5E-14 T 11-10-2018 IPR002151 Kinesin light chain GO:0003777|GO:0005871 Reactome: R-HSA-2132295|Reactome: R-HSA-5625970|Reactome: R-HSA-6811434|Reactome: R-HSA-983189 SYN_00677 c2b6edabfca9220a2f5a2cd64ff2bd82 399 PRINTS PR00381 Kinesin light chain signature 238 258 3.5E-14 T 11-10-2018 IPR002151 Kinesin light chain GO:0003777|GO:0005871 Reactome: R-HSA-2132295|Reactome: R-HSA-5625970|Reactome: R-HSA-6811434|Reactome: R-HSA-983189 SYN_00677 c2b6edabfca9220a2f5a2cd64ff2bd82 399 SUPERFAMILY SSF48452 33 144 6.22E-22 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00607 5b8c195e695d0b39d6b50ec3973cf4ef 278 SUPERFAMILY SSF63380 3 92 7.78E-20 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel SYN_00607 5b8c195e695d0b39d6b50ec3973cf4ef 278 Gene3D G3DSA:2.40.30.10 1 91 7.6E-22 T 11-10-2018 SYN_00607 5b8c195e695d0b39d6b50ec3973cf4ef 278 PIRSF PIRSF006816 1 254 1.3E-65 T 11-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 SYN_00607 5b8c195e695d0b39d6b50ec3973cf4ef 278 SUPERFAMILY SSF52343 88 248 1.02E-33 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain SYN_00607 5b8c195e695d0b39d6b50ec3973cf4ef 278 Gene3D G3DSA:3.40.50.80 100 203 3.4E-38 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain SYN_00607 5b8c195e695d0b39d6b50ec3973cf4ef 278 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 212 249 7.8E-12 T 11-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain SYN_01162 aebb358452f809f1358050fd71fcf6f5 246 Pfam PF02535 ZIP Zinc transporter 90 241 8.5E-24 T 11-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 SYN_01348 a6a23071f6477bcf5f3d80015f9616c7 618 Gene3D G3DSA:3.40.1440.10 2 101 5.9E-32 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 SYN_01348 a6a23071f6477bcf5f3d80015f9616c7 618 Pfam PF12826 Helix-hairpin-helix motif 559 610 1.9E-10 T 11-10-2018 SYN_01348 a6a23071f6477bcf5f3d80015f9616c7 618 SMART SM00465 16 97 4.6E-21 T 11-10-2018 IPR000305 GIY-YIG endonuclease SYN_01348 a6a23071f6477bcf5f3d80015f9616c7 618 Pfam PF01541 GIY-YIG catalytic domain 18 92 2.4E-11 T 11-10-2018 IPR000305 GIY-YIG endonuclease SYN_01348 a6a23071f6477bcf5f3d80015f9616c7 618 SUPERFAMILY SSF46600 189 242 3.92E-12 T 11-10-2018 IPR036876 UVR domain superfamily SYN_01348 a6a23071f6477bcf5f3d80015f9616c7 618 Pfam PF02151 UvrB/uvrC motif 204 237 3.7E-9 T 11-10-2018 IPR001943 UVR domain GO:0005515 SYN_01348 a6a23071f6477bcf5f3d80015f9616c7 618 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 381 540 3.1E-46 T 11-10-2018 IPR001162 UvrC family homology region SYN_01348 a6a23071f6477bcf5f3d80015f9616c7 618 Hamap MF_00203 UvrABC system protein C [uvrC]. 3 605 27.842 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 SYN_01348 a6a23071f6477bcf5f3d80015f9616c7 618 SUPERFAMILY SSF82771 17 99 2.88E-21 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 SYN_01348 a6a23071f6477bcf5f3d80015f9616c7 618 SMART SM00278 554 573 21.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SYN_01348 a6a23071f6477bcf5f3d80015f9616c7 618 SMART SM00278 586 605 0.42 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SYN_01348 a6a23071f6477bcf5f3d80015f9616c7 618 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 10 587 1.7E-169 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 SYN_01348 a6a23071f6477bcf5f3d80015f9616c7 618 Gene3D G3DSA:3.30.420.340 373 547 8.0E-53 T 11-10-2018 IPR038476 UvrC homology region 2 superfamily SYN_01348 a6a23071f6477bcf5f3d80015f9616c7 618 Gene3D G3DSA:1.10.150.20 548 606 5.2E-18 T 11-10-2018 SYN_01348 a6a23071f6477bcf5f3d80015f9616c7 618 SUPERFAMILY SSF47781 508 609 2.03E-22 T 11-10-2018 IPR010994 RuvA domain 2-like SYN_00445 f447276e7f6c8106c165b12e7ccbe082 326 Pfam PF01040 UbiA prenyltransferase family 38 288 2.0E-30 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 SYN_00445 f447276e7f6c8106c165b12e7ccbe082 326 PIRSF PIRSF005355 13 320 1.5E-92 T 11-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 SYN_02776 77409f1ce3f7c4eb7299c19024dd35ae 476 SMART SM00977 401 473 1.2E-25 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SYN_02776 77409f1ce3f7c4eb7299c19024dd35ae 476 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 401 445 3.5E-17 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SYN_02776 77409f1ce3f7c4eb7299c19024dd35ae 476 SUPERFAMILY SSF56037 385 471 4.32E-23 T 11-10-2018 SYN_02776 77409f1ce3f7c4eb7299c19024dd35ae 476 SUPERFAMILY SSF82829 215 326 6.02E-13 T 11-10-2018 SYN_02776 77409f1ce3f7c4eb7299c19024dd35ae 476 Pfam PF01171 PP-loop family 20 203 1.2E-51 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 SYN_02776 77409f1ce3f7c4eb7299c19024dd35ae 476 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 21 207 1.2E-55 T 11-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SYN_02776 77409f1ce3f7c4eb7299c19024dd35ae 476 Gene3D G3DSA:1.10.10.1360 132 216 4.8E-30 T 11-10-2018 SYN_02776 77409f1ce3f7c4eb7299c19024dd35ae 476 Gene3D G3DSA:1.20.59.30 251 331 1.3E-10 T 11-10-2018 SYN_02776 77409f1ce3f7c4eb7299c19024dd35ae 476 SUPERFAMILY SSF52402 7 235 1.18E-57 T 11-10-2018 SYN_02776 77409f1ce3f7c4eb7299c19024dd35ae 476 Pfam PF09179 TilS substrate binding domain 260 326 1.2E-4 T 11-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SYN_02776 77409f1ce3f7c4eb7299c19024dd35ae 476 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 5 320 25.462 T 11-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SYN_02776 77409f1ce3f7c4eb7299c19024dd35ae 476 Pfam PF11734 TilS substrate C-terminal domain 402 465 1.4E-15 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SYN_02776 77409f1ce3f7c4eb7299c19024dd35ae 476 Gene3D G3DSA:3.40.50.620 1 131 1.8E-37 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_02812 422abc936fa557d9f8e3064deba531bf 463 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 7 461 1.6E-108 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SYN_02812 422abc936fa557d9f8e3064deba531bf 463 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 405 461 5.2E-9 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SYN_02812 422abc936fa557d9f8e3064deba531bf 463 Pfam PF00460 Flagella basal body rod protein 14 37 2.7E-7 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SYN_02812 422abc936fa557d9f8e3064deba531bf 463 PRINTS PR01005 Flagellar hook-associated protein signature 14 37 1.4E-11 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SYN_02812 422abc936fa557d9f8e3064deba531bf 463 PRINTS PR01005 Flagellar hook-associated protein signature 52 74 1.4E-11 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SYN_02812 422abc936fa557d9f8e3064deba531bf 463 PRINTS PR01005 Flagellar hook-associated protein signature 127 147 1.4E-11 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SYN_02812 422abc936fa557d9f8e3064deba531bf 463 PRINTS PR01005 Flagellar hook-associated protein signature 218 236 1.4E-11 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SYN_02812 422abc936fa557d9f8e3064deba531bf 463 PRINTS PR01005 Flagellar hook-associated protein signature 160 184 1.4E-11 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 SYN_02812 422abc936fa557d9f8e3064deba531bf 463 SUPERFAMILY SSF64518 137 461 2.22E-27 T 11-10-2018 SYN_02812 422abc936fa557d9f8e3064deba531bf 463 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 14 34 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site SYN_01122 c439c10143f7b2f3717017c779a4e08e 645 Gene3D G3DSA:1.10.8.60 499 565 1.9E-24 T 11-10-2018 SYN_01122 c439c10143f7b2f3717017c779a4e08e 645 SUPERFAMILY SSF55785 155 281 6.46E-13 T 11-10-2018 IPR035965 PAS domain superfamily SYN_01122 c439c10143f7b2f3717017c779a4e08e 645 SMART SM00382 348 491 9.6E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01122 c439c10143f7b2f3717017c779a4e08e 645 Gene3D G3DSA:1.10.10.60 573 641 3.6E-10 T 11-10-2018 SYN_01122 c439c10143f7b2f3717017c779a4e08e 645 Gene3D G3DSA:3.40.50.300 315 498 6.8E-63 T 11-10-2018 SYN_01122 c439c10143f7b2f3717017c779a4e08e 645 SUPERFAMILY SSF55785 56 159 1.66E-7 T 11-10-2018 IPR035965 PAS domain superfamily SYN_01122 c439c10143f7b2f3717017c779a4e08e 645 Pfam PF02954 Bacterial regulatory protein, Fis family 597 637 2.9E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_01122 c439c10143f7b2f3717017c779a4e08e 645 Pfam PF00158 Sigma-54 interaction domain 328 494 1.4E-66 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SYN_01122 c439c10143f7b2f3717017c779a4e08e 645 SUPERFAMILY SSF52540 327 564 1.23E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01122 c439c10143f7b2f3717017c779a4e08e 645 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 541 550 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site SYN_01122 c439c10143f7b2f3717017c779a4e08e 645 Gene3D G3DSA:2.10.70.100 242 289 3.2E-8 T 11-10-2018 SYN_01122 c439c10143f7b2f3717017c779a4e08e 645 Gene3D G3DSA:3.30.450.20 166 237 4.0E-28 T 11-10-2018 SYN_01122 c439c10143f7b2f3717017c779a4e08e 645 Pfam PF08447 PAS fold 193 281 1.8E-19 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 SYN_01122 c439c10143f7b2f3717017c779a4e08e 645 Gene3D G3DSA:3.30.450.20 49 156 2.6E-9 T 11-10-2018 SYN_01122 c439c10143f7b2f3717017c779a4e08e 645 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 352 365 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SYN_01122 c439c10143f7b2f3717017c779a4e08e 645 SMART SM00091 51 119 2.8 T 11-10-2018 IPR000014 PAS domain SYN_01122 c439c10143f7b2f3717017c779a4e08e 645 SMART SM00091 170 238 0.014 T 11-10-2018 IPR000014 PAS domain SYN_01122 c439c10143f7b2f3717017c779a4e08e 645 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 414 429 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SYN_00848 8851827b7366dfcbd807fd86a66a9650 529 Gene3D G3DSA:3.40.50.300 17 270 1.5E-110 T 11-10-2018 SYN_00848 8851827b7366dfcbd807fd86a66a9650 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 1 522 50.945 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 SYN_00848 8851827b7366dfcbd807fd86a66a9650 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 382 509 7.6E-48 T 11-10-2018 IPR032090 Peptide chain release factor 3, C-terminal SYN_00848 8851827b7366dfcbd807fd86a66a9650 529 PRINTS PR00315 GTP-binding elongation factor signature 61 69 1.2E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_00848 8851827b7366dfcbd807fd86a66a9650 529 PRINTS PR00315 GTP-binding elongation factor signature 97 108 1.2E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_00848 8851827b7366dfcbd807fd86a66a9650 529 PRINTS PR00315 GTP-binding elongation factor signature 81 91 1.2E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_00848 8851827b7366dfcbd807fd86a66a9650 529 PRINTS PR00315 GTP-binding elongation factor signature 133 142 1.2E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_00848 8851827b7366dfcbd807fd86a66a9650 529 PRINTS PR00315 GTP-binding elongation factor signature 11 24 1.2E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_00848 8851827b7366dfcbd807fd86a66a9650 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 54 69 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site SYN_00848 8851827b7366dfcbd807fd86a66a9650 529 SUPERFAMILY SSF52540 5 273 6.38E-88 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00848 8851827b7366dfcbd807fd86a66a9650 529 Gene3D G3DSA:3.30.70.3280 385 524 3.4E-52 T 11-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily SYN_00848 8851827b7366dfcbd807fd86a66a9650 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 146 7.1E-21 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 SYN_00848 8851827b7366dfcbd807fd86a66a9650 529 Gene3D G3DSA:3.40.50.300 10 375 1.5E-110 T 11-10-2018 SYN_00848 8851827b7366dfcbd807fd86a66a9650 529 SUPERFAMILY SSF50447 256 388 4.01E-31 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily SYN_00848 8851827b7366dfcbd807fd86a66a9650 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 3 524 5.1E-236 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 SYN_00848 8851827b7366dfcbd807fd86a66a9650 529 SUPERFAMILY SSF54980 388 459 1.87E-15 T 11-10-2018 IPR035647 EF-G domain III/V-like SYN_00848 8851827b7366dfcbd807fd86a66a9650 529 Pfam PF03144 Elongation factor Tu domain 2 309 375 1.2E-9 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 SYN_00848 8851827b7366dfcbd807fd86a66a9650 529 Pfam PF00009 Elongation factor Tu GTP binding domain 8 273 2.2E-51 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_01524 b95522482099985fa67ebb07f42f28dc 533 Pfam PF02355 Protein export membrane protein 353 518 1.6E-23 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial SYN_01524 b95522482099985fa67ebb07f42f28dc 533 Gene3D G3DSA:1.20.1640.10 366 522 1.7E-10 T 11-10-2018 SYN_01524 b95522482099985fa67ebb07f42f28dc 533 PRINTS PR00702 Acriflavin resistance protein family signature 368 391 1.7E-8 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SYN_01524 b95522482099985fa67ebb07f42f28dc 533 PRINTS PR00702 Acriflavin resistance protein family signature 421 445 1.7E-8 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SYN_01524 b95522482099985fa67ebb07f42f28dc 533 PRINTS PR00702 Acriflavin resistance protein family signature 496 519 1.7E-8 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 SYN_01524 b95522482099985fa67ebb07f42f28dc 533 Gene3D G3DSA:3.30.70.3400 147 352 2.0E-68 T 11-10-2018 SYN_01524 b95522482099985fa67ebb07f42f28dc 533 Gene3D G3DSA:3.30.1360.200 205 350 2.0E-68 T 11-10-2018 SYN_01524 b95522482099985fa67ebb07f42f28dc 533 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 46 518 4.9E-152 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 SYN_01524 b95522482099985fa67ebb07f42f28dc 533 Gene3D G3DSA:3.30.70.3400 46 127 1.3E-5 T 11-10-2018 SYN_01524 b95522482099985fa67ebb07f42f28dc 533 SUPERFAMILY SSF82866 329 523 9.02E-48 T 11-10-2018 SYN_01524 b95522482099985fa67ebb07f42f28dc 533 Pfam PF07549 SecD/SecF GG Motif 44 63 1.3E-4 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site SYN_01524 b95522482099985fa67ebb07f42f28dc 533 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 533 45.027 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 SYN_01524 b95522482099985fa67ebb07f42f28dc 533 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 282 512 1.4E-85 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SYN_01676 4ab3f68507c921000e077d670a8f1b60 273 SUPERFAMILY SSF53927 8 254 2.5E-61 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 SYN_01676 4ab3f68507c921000e077d670a8f1b60 273 Pfam PF02634 FdhD/NarQ family 27 272 1.9E-72 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 SYN_01676 4ab3f68507c921000e077d670a8f1b60 273 Gene3D G3DSA:3.40.140.10 112 273 9.3E-42 T 11-10-2018 SYN_01676 4ab3f68507c921000e077d670a8f1b60 273 Gene3D G3DSA:3.10.20.10 29 109 5.0E-10 T 11-10-2018 SYN_01676 4ab3f68507c921000e077d670a8f1b60 273 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 24 252 1.2E-54 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 SYN_01676 4ab3f68507c921000e077d670a8f1b60 273 PIRSF PIRSF015626 1 271 3.3E-62 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 SYN_01676 4ab3f68507c921000e077d670a8f1b60 273 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 3 273 28.456 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 SYN_00993 6c6350e2f82bc20a8b3568829ccc0526 65 Gene3D G3DSA:1.10.287.310 1 61 3.0E-24 T 11-10-2018 SYN_00993 6c6350e2f82bc20a8b3568829ccc0526 65 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 11-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00993 6c6350e2f82bc20a8b3568829ccc0526 65 SUPERFAMILY SSF46561 1 62 8.76E-19 T 11-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00993 6c6350e2f82bc20a8b3568829ccc0526 65 TIGRFAM TIGR00012 L29: ribosomal protein uL29 6 60 2.6E-18 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00993 6c6350e2f82bc20a8b3568829ccc0526 65 Pfam PF00831 Ribosomal L29 protein 4 60 1.1E-19 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00993 6c6350e2f82bc20a8b3568829ccc0526 65 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 17.252 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00382 7c69598ee016850bca7a9e7d89760514 307 Gene3D G3DSA:3.90.1170.20 11 123 2.6E-66 T 11-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 SYN_00382 7c69598ee016850bca7a9e7d89760514 307 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 22 106 5.5E-19 T 11-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 SYN_00382 7c69598ee016850bca7a9e7d89760514 307 PIRSF PIRSF006250 1 283 1.5E-58 T 11-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 SYN_00382 7c69598ee016850bca7a9e7d89760514 307 Gene3D G3DSA:3.20.20.70 124 269 2.6E-66 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_00382 7c69598ee016850bca7a9e7d89760514 307 SUPERFAMILY SSF54675 3 107 5.49E-21 T 11-10-2018 SYN_00382 7c69598ee016850bca7a9e7d89760514 307 SUPERFAMILY SSF51690 108 280 1.33E-40 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 SYN_00382 7c69598ee016850bca7a9e7d89760514 307 TIGRFAM TIGR01334 modD: modD protein 5 279 3.8E-74 T 11-10-2018 IPR006242 Putative pyrophosphorylase ModD GO:0016763 SYN_00382 7c69598ee016850bca7a9e7d89760514 307 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 108 275 2.5E-31 T 11-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 SYN_00517 abf4ef1c519768be5dee759a087723db 479 ProSitePatterns PS00331 Malic enzymes signature. 234 250 - T 11-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 SYN_00517 abf4ef1c519768be5dee759a087723db 479 SUPERFAMILY SSF51735 238 469 1.74E-73 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_00517 abf4ef1c519768be5dee759a087723db 479 Pfam PF00390 Malic enzyme, N-terminal domain 94 226 2.0E-26 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SYN_00517 abf4ef1c519768be5dee759a087723db 479 SMART SM00919 238 461 4.7E-119 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 SYN_00517 abf4ef1c519768be5dee759a087723db 479 Gene3D G3DSA:3.40.50.10380 80 235 7.8E-70 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 SYN_00517 abf4ef1c519768be5dee759a087723db 479 SUPERFAMILY SSF53223 88 236 6.04E-56 T 11-10-2018 SYN_00517 abf4ef1c519768be5dee759a087723db 479 Pfam PF03949 Malic enzyme, NAD binding domain 240 460 4.9E-21 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 SYN_00517 abf4ef1c519768be5dee759a087723db 479 Gene3D G3DSA:3.40.50.720 236 477 6.4E-78 T 11-10-2018 SYN_00517 abf4ef1c519768be5dee759a087723db 479 SMART SM01274 93 226 2.2E-82 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SYN_00517 abf4ef1c519768be5dee759a087723db 479 PIRSF PIRSF000106 75 477 7.2E-81 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 SYN_01901 31aa7f188ca848a341a601bbcd7bc0f3 501 SUPERFAMILY SSF81301 180 390 8.01E-50 T 11-10-2018 SYN_01901 31aa7f188ca848a341a601bbcd7bc0f3 501 Gene3D G3DSA:1.10.3210.10 7 189 4.7E-20 T 11-10-2018 SYN_01901 31aa7f188ca848a341a601bbcd7bc0f3 501 SMART SM00954 233 346 3.5E-53 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 SYN_01901 31aa7f188ca848a341a601bbcd7bc0f3 501 Pfam PF13328 HD domain 38 172 1.2E-6 T 11-10-2018 IPR003607 HD/PDEase domain SYN_01901 31aa7f188ca848a341a601bbcd7bc0f3 501 Pfam PF04607 Region found in RelA / SpoT proteins 233 345 5.9E-30 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 SYN_01901 31aa7f188ca848a341a601bbcd7bc0f3 501 SUPERFAMILY SSF109604 16 189 6.59E-15 T 11-10-2018 SYN_01901 31aa7f188ca848a341a601bbcd7bc0f3 501 Gene3D G3DSA:3.10.20.30 381 450 2.8E-6 T 11-10-2018 IPR012675 Beta-grasp domain superfamily SYN_01901 31aa7f188ca848a341a601bbcd7bc0f3 501 Gene3D G3DSA:3.30.460.10 191 326 1.1E-40 T 11-10-2018 SYN_01901 31aa7f188ca848a341a601bbcd7bc0f3 501 SUPERFAMILY SSF54285 390 445 2.18E-5 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SYN_01216 3c1088f9ad380565da2de608237693aa 599 Gene3D G3DSA:1.10.287.70 40 153 5.5E-33 T 11-10-2018 SYN_01216 3c1088f9ad380565da2de608237693aa 599 SUPERFAMILY SSF81324 52 187 1.02E-20 T 11-10-2018 SYN_01216 3c1088f9ad380565da2de608237693aa 599 SUPERFAMILY SSF51735 389 516 4.73E-28 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_01216 3c1088f9ad380565da2de608237693aa 599 SUPERFAMILY SSF116726 302 378 3.14E-12 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 SYN_01216 3c1088f9ad380565da2de608237693aa 599 Pfam PF07885 Ion channel 65 135 3.1E-10 T 11-10-2018 IPR013099 Potassium channel domain SYN_01216 3c1088f9ad380565da2de608237693aa 599 Pfam PF02080 TrkA-C domain 317 376 2.0E-10 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SYN_01216 3c1088f9ad380565da2de608237693aa 599 Pfam PF02080 TrkA-C domain 529 593 2.4E-7 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SYN_01216 3c1088f9ad380565da2de608237693aa 599 SUPERFAMILY SSF116726 518 595 1.44E-11 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 SYN_01216 3c1088f9ad380565da2de608237693aa 599 Gene3D G3DSA:3.40.50.720 155 292 3.8E-37 T 11-10-2018 SYN_01216 3c1088f9ad380565da2de608237693aa 599 Gene3D G3DSA:3.30.70.1450 520 595 1.1E-16 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 SYN_01216 3c1088f9ad380565da2de608237693aa 599 Gene3D G3DSA:3.40.50.720 390 519 1.8E-31 T 11-10-2018 SYN_01216 3c1088f9ad380565da2de608237693aa 599 Gene3D G3DSA:3.30.70.1450 308 378 4.8E-16 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 SYN_01216 3c1088f9ad380565da2de608237693aa 599 PRINTS PR00169 Potassium channel signature 56 79 1.6E-6 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 SYN_01216 3c1088f9ad380565da2de608237693aa 599 PRINTS PR00169 Potassium channel signature 85 107 1.6E-6 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 SYN_01216 3c1088f9ad380565da2de608237693aa 599 PRINTS PR00169 Potassium channel signature 114 140 1.6E-6 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 SYN_01216 3c1088f9ad380565da2de608237693aa 599 Pfam PF02254 TrkA-N domain 391 501 1.5E-25 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SYN_01216 3c1088f9ad380565da2de608237693aa 599 Pfam PF02254 TrkA-N domain 167 278 1.8E-13 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SYN_01216 3c1088f9ad380565da2de608237693aa 599 SUPERFAMILY SSF51735 162 294 3.64E-18 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_01419 128ddc4d421a03bec32e50280bb9a7af 333 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 12 148 2.4E-7 T 11-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 SYN_01419 128ddc4d421a03bec32e50280bb9a7af 333 Gene3D G3DSA:3.40.50.620 10 166 2.2E-37 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_01419 128ddc4d421a03bec32e50280bb9a7af 333 Pfam PF05670 Domain of unknown function (DUF814) 237 309 5.0E-7 T 11-10-2018 IPR008532 Domain of unknown function DUF814 SYN_01419 128ddc4d421a03bec32e50280bb9a7af 333 SUPERFAMILY SSF52402 13 236 3.97E-29 T 11-10-2018 SYN_02070 fbf879d9a17b1fff8887337432be8811 381 Pfam PF02405 Permease MlaE 168 375 4.3E-65 T 11-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 SYN_02070 fbf879d9a17b1fff8887337432be8811 381 SUPERFAMILY SSF52091 18 103 4.91E-7 T 11-10-2018 IPR036513 STAS domain superfamily SYN_02105 fb0d153ece84e026deee46fcc26e86a8 216 PRINTS PR00126 ATP synthase gamma subunit signature 153 172 9.9E-15 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02105 fb0d153ece84e026deee46fcc26e86a8 216 PRINTS PR00126 ATP synthase gamma subunit signature 81 98 9.9E-15 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02105 fb0d153ece84e026deee46fcc26e86a8 216 PRINTS PR00126 ATP synthase gamma subunit signature 184 205 9.9E-15 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02105 fb0d153ece84e026deee46fcc26e86a8 216 Pfam PF00231 ATP synthase 1 206 6.3E-35 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02105 fb0d153ece84e026deee46fcc26e86a8 216 Gene3D G3DSA:3.40.1380.10 1 125 1.7E-41 T 11-10-2018 SYN_02105 fb0d153ece84e026deee46fcc26e86a8 216 Gene3D G3DSA:1.10.287.80 126 202 1.7E-41 T 11-10-2018 SYN_02105 fb0d153ece84e026deee46fcc26e86a8 216 SUPERFAMILY SSF52943 1 206 6.02E-37 T 11-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_01169 131be2c355800e5ad3413971f8f7fca1 174 SUPERFAMILY SSF51161 3 168 6.65E-40 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily SYN_01169 131be2c355800e5ad3413971f8f7fca1 174 Gene3D G3DSA:2.160.10.10 2 173 1.5E-44 T 11-10-2018 SYN_01169 131be2c355800e5ad3413971f8f7fca1 174 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 45 2.8E-7 T 11-10-2018 IPR001451 Hexapeptide repeat SYN_01169 131be2c355800e5ad3413971f8f7fca1 174 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 93 121 0.0027 T 11-10-2018 IPR001451 Hexapeptide repeat SYN_02257 43cf9b485ef2167703a9bfa382bc21f3 662 SUPERFAMILY SSF51445 146 559 4.23E-85 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily SYN_02257 43cf9b485ef2167703a9bfa382bc21f3 662 SUPERFAMILY SSF81296 37 143 1.92E-20 T 11-10-2018 IPR014756 Immunoglobulin E-set SYN_02257 43cf9b485ef2167703a9bfa382bc21f3 662 SMART SM00642 186 530 4.5E-7 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SYN_02257 43cf9b485ef2167703a9bfa382bc21f3 662 Gene3D G3DSA:3.20.20.80 3 553 1.1E-246 T 11-10-2018 SYN_02257 43cf9b485ef2167703a9bfa382bc21f3 662 Gene3D G3DSA:2.60.40.10 39 146 1.1E-246 T 11-10-2018 IPR013783 Immunoglobulin-like fold SYN_02257 43cf9b485ef2167703a9bfa382bc21f3 662 SUPERFAMILY SSF51011 564 661 2.37E-14 T 11-10-2018 SYN_02257 43cf9b485ef2167703a9bfa382bc21f3 662 Pfam PF00128 Alpha amylase, catalytic domain 212 262 6.2E-9 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SYN_02257 43cf9b485ef2167703a9bfa382bc21f3 662 PIRSF PIRSF000463 3 662 1.2E-195 T 11-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 SYN_02257 43cf9b485ef2167703a9bfa382bc21f3 662 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 570 660 2.0E-14 T 11-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 SYN_02257 43cf9b485ef2167703a9bfa382bc21f3 662 Gene3D G3DSA:2.60.40.1180 562 662 3.3E-21 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta SYN_02257 43cf9b485ef2167703a9bfa382bc21f3 662 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 44 121 6.2E-14 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 SYN_00173 b6d85f06b548f45104615da6fa13b9c8 136 SMART SM00448 11 125 1.6E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00173 b6d85f06b548f45104615da6fa13b9c8 136 Gene3D G3DSA:3.40.50.2300 3 133 9.5E-31 T 11-10-2018 SYN_00173 b6d85f06b548f45104615da6fa13b9c8 136 Pfam PF00072 Response regulator receiver domain 13 125 2.0E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00173 b6d85f06b548f45104615da6fa13b9c8 136 SUPERFAMILY SSF52172 9 130 5.41E-32 T 11-10-2018 IPR011006 CheY-like superfamily SYN_02125 1891c1f1adcdd36fd0c402a6ee305fe1 274 PIRSF PIRSF000375 1 273 9.1E-115 T 11-10-2018 IPR016217 Nitrogen fixation, NifU SYN_02125 1891c1f1adcdd36fd0c402a6ee305fe1 274 Gene3D G3DSA:1.10.10.1100 135 188 4.6E-12 T 11-10-2018 SYN_02125 1891c1f1adcdd36fd0c402a6ee305fe1 274 Gene3D G3DSA:3.90.1010.10 1 134 4.8E-54 T 11-10-2018 SYN_02125 1891c1f1adcdd36fd0c402a6ee305fe1 274 SUPERFAMILY SSF117916 192 272 1.42E-20 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily SYN_02125 1891c1f1adcdd36fd0c402a6ee305fe1 274 Pfam PF01106 NifU-like domain 204 269 5.8E-20 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 SYN_02125 1891c1f1adcdd36fd0c402a6ee305fe1 274 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 211 273 3.0E-22 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 SYN_02125 1891c1f1adcdd36fd0c402a6ee305fe1 274 TIGRFAM TIGR02000 NifU_proper: Fe-S cluster assembly protein NifU 1 270 8.2E-106 T 11-10-2018 IPR010238 NIF system FeS cluster assembly, NifU GO:0005506|GO:0016226|GO:0051536 SYN_02125 1891c1f1adcdd36fd0c402a6ee305fe1 274 Pfam PF01592 NifU-like N terminal domain 3 124 1.6E-47 T 11-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 SYN_02125 1891c1f1adcdd36fd0c402a6ee305fe1 274 Gene3D G3DSA:3.30.300.130 195 274 2.9E-18 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily SYN_02125 1891c1f1adcdd36fd0c402a6ee305fe1 274 Pfam PF04324 BFD-like [2Fe-2S] binding domain 132 182 5.1E-21 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain SYN_02125 1891c1f1adcdd36fd0c402a6ee305fe1 274 SUPERFAMILY SSF82649 6 127 1.49E-42 T 11-10-2018 SYN_01735 71d983a6c8c49c2048d9fda70d8dd1ae 358 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 33 350 2.9E-69 T 11-10-2018 IPR003770 Endolytic murein transglycosylase SYN_01735 71d983a6c8c49c2048d9fda70d8dd1ae 358 Pfam PF02618 YceG-like family 63 347 6.4E-79 T 11-10-2018 IPR003770 Endolytic murein transglycosylase SYN_01735 71d983a6c8c49c2048d9fda70d8dd1ae 358 Gene3D G3DSA:1.10.8.1150 60 132 3.1E-10 T 11-10-2018 SYN_01735 71d983a6c8c49c2048d9fda70d8dd1ae 358 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 34 352 32.416 T 11-10-2018 IPR003770 Endolytic murein transglycosylase SYN_01735 71d983a6c8c49c2048d9fda70d8dd1ae 358 Gene3D G3DSA:3.30.160.60 322 356 9.3E-12 T 11-10-2018 SYN_00908 5ec5b1e68aa9a0bbcad3b9f8fb52601f 400 SUPERFAMILY SSF53383 4 398 5.85E-116 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SYN_00908 5ec5b1e68aa9a0bbcad3b9f8fb52601f 400 Gene3D G3DSA:3.40.640.10 65 287 3.4E-138 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SYN_00908 5ec5b1e68aa9a0bbcad3b9f8fb52601f 400 Gene3D G3DSA:3.90.1150.10 28 392 3.4E-138 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SYN_00908 5ec5b1e68aa9a0bbcad3b9f8fb52601f 400 Pfam PF00155 Aminotransferase class I and II 34 392 9.9E-73 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SYN_00908 5ec5b1e68aa9a0bbcad3b9f8fb52601f 400 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 237 250 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 SYN_01477 1dc0e08c2894b1c4b7a01f5ab516f86c 362 Gene3D G3DSA:3.40.630.30 147 335 4.4E-51 T 11-10-2018 SYN_01477 1dc0e08c2894b1c4b7a01f5ab516f86c 362 SUPERFAMILY SSF55729 168 350 6.71E-34 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase SYN_01477 1dc0e08c2894b1c4b7a01f5ab516f86c 362 SUPERFAMILY SSF55729 22 115 9.0E-6 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase SYN_01477 1dc0e08c2894b1c4b7a01f5ab516f86c 362 Pfam PF02388 FemAB family 19 218 3.1E-15 T 11-10-2018 IPR003447 FemABX peptidyl transferase GO:0016755|GO:0044038 SYN_01477 1dc0e08c2894b1c4b7a01f5ab516f86c 362 Pfam PF02388 FemAB family 248 350 9.9E-25 T 11-10-2018 IPR003447 FemABX peptidyl transferase GO:0016755|GO:0044038 SYN_01477 1dc0e08c2894b1c4b7a01f5ab516f86c 362 Gene3D G3DSA:3.40.630.30 15 119 4.2E-6 T 11-10-2018 SYN_00894 37e279e406140a7d0deeafb97d2305ba 315 SUPERFAMILY SSF49493 221 307 3.14E-24 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SYN_00894 37e279e406140a7d0deeafb97d2305ba 315 SUPERFAMILY SSF49493 140 229 1.57E-22 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SYN_00894 37e279e406140a7d0deeafb97d2305ba 315 PRINTS PR00625 DnaJ domain signature 24 39 5.3E-28 T 11-10-2018 IPR001623 DnaJ domain SYN_00894 37e279e406140a7d0deeafb97d2305ba 315 PRINTS PR00625 DnaJ domain signature 61 80 5.3E-28 T 11-10-2018 IPR001623 DnaJ domain SYN_00894 37e279e406140a7d0deeafb97d2305ba 315 PRINTS PR00625 DnaJ domain signature 41 61 5.3E-28 T 11-10-2018 IPR001623 DnaJ domain SYN_00894 37e279e406140a7d0deeafb97d2305ba 315 PRINTS PR00625 DnaJ domain signature 6 24 5.3E-28 T 11-10-2018 IPR001623 DnaJ domain SYN_00894 37e279e406140a7d0deeafb97d2305ba 315 Gene3D G3DSA:2.60.260.20 216 314 3.1E-30 T 11-10-2018 SYN_00894 37e279e406140a7d0deeafb97d2305ba 315 SUPERFAMILY SSF46565 3 98 1.44E-33 T 11-10-2018 IPR036869 Chaperone J-domain superfamily SYN_00894 37e279e406140a7d0deeafb97d2305ba 315 Pfam PF01556 DnaJ C terminal domain 147 296 9.0E-42 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal SYN_00894 37e279e406140a7d0deeafb97d2305ba 315 Pfam PF00226 DnaJ domain 4 66 2.3E-30 T 11-10-2018 IPR001623 DnaJ domain SYN_00894 37e279e406140a7d0deeafb97d2305ba 315 Gene3D G3DSA:1.10.287.110 1 110 5.7E-35 T 11-10-2018 IPR036869 Chaperone J-domain superfamily SYN_00894 37e279e406140a7d0deeafb97d2305ba 315 SMART SM00271 3 61 1.1E-33 T 11-10-2018 IPR001623 DnaJ domain SYN_00894 37e279e406140a7d0deeafb97d2305ba 315 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 11-10-2018 IPR018253 DnaJ domain, conserved site SYN_00894 37e279e406140a7d0deeafb97d2305ba 315 Gene3D G3DSA:2.60.260.20 142 214 4.3E-22 T 11-10-2018 SYN_00027 17fbe33b9f4eabc07544d2c04d39aede 544 Gene3D G3DSA:3.50.7.10 192 372 1.1E-236 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily SYN_00027 17fbe33b9f4eabc07544d2c04d39aede 544 SUPERFAMILY SSF54849 138 206 1.69E-24 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily SYN_00027 17fbe33b9f4eabc07544d2c04d39aede 544 SUPERFAMILY SSF52029 184 376 2.24E-84 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily SYN_00027 17fbe33b9f4eabc07544d2c04d39aede 544 Gene3D G3DSA:3.30.260.10 136 410 1.1E-236 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily SYN_00027 17fbe33b9f4eabc07544d2c04d39aede 544 SUPERFAMILY SSF48592 8 520 2.82E-77 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily SYN_00027 17fbe33b9f4eabc07544d2c04d39aede 544 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 11-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 SYN_00027 17fbe33b9f4eabc07544d2c04d39aede 544 PRINTS PR00298 60kDa chaperonin signature 398 419 8.2E-75 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 SYN_00027 17fbe33b9f4eabc07544d2c04d39aede 544 PRINTS PR00298 60kDa chaperonin signature 27 53 8.2E-75 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 SYN_00027 17fbe33b9f4eabc07544d2c04d39aede 544 PRINTS PR00298 60kDa chaperonin signature 268 291 8.2E-75 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 SYN_00027 17fbe33b9f4eabc07544d2c04d39aede 544 PRINTS PR00298 60kDa chaperonin signature 83 110 8.2E-75 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 SYN_00027 17fbe33b9f4eabc07544d2c04d39aede 544 PRINTS PR00298 60kDa chaperonin signature 350 375 8.2E-75 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 SYN_00027 17fbe33b9f4eabc07544d2c04d39aede 544 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 7.2E-262 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 SYN_00027 17fbe33b9f4eabc07544d2c04d39aede 544 Hamap MF_00600 60 kDa chaperonin [groL]. 2 542 42.056 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 SYN_00027 17fbe33b9f4eabc07544d2c04d39aede 544 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 6.0E-102 T 11-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 SYN_00027 17fbe33b9f4eabc07544d2c04d39aede 544 Gene3D G3DSA:1.10.560.10 8 520 1.1E-236 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily SYN_02034 c747d5b63e94ecf08a067accebb4d121 150 Gene3D G3DSA:1.10.150.20 15 77 5.6E-6 T 11-10-2018 SYN_02034 c747d5b63e94ecf08a067accebb4d121 150 Gene3D G3DSA:1.10.150.20 78 146 1.9E-5 T 11-10-2018 SYN_02034 c747d5b63e94ecf08a067accebb4d121 150 Pfam PF14229 Domain of unknown function (DUF4332) 26 144 5.9E-39 T 11-10-2018 IPR025567 Domain of unknown function DUF4332 KEGG: 00970+6.1.1.6 SYN_03766 1d5116f64f4603127dd6c183dfc2a36d 342 Pfam PF02706 Chain length determinant protein 18 116 8.3E-13 T 11-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 SYN_03766 1d5116f64f4603127dd6c183dfc2a36d 342 Pfam PF13807 G-rich domain on putative tyrosine kinase 254 317 3.0E-7 T 11-10-2018 IPR032807 Tyrosine kinase, G-rich domain SYN_01044 49da436cdb247ef190ff6cc11b5a91db 268 SUPERFAMILY SSF118196 7 174 2.88E-42 T 11-10-2018 IPR036413 YaeB-like superfamily SYN_01044 49da436cdb247ef190ff6cc11b5a91db 268 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 6 133 1.7E-31 T 11-10-2018 IPR023370 YaeB-like, N-terminal domain SYN_01044 49da436cdb247ef190ff6cc11b5a91db 268 SUPERFAMILY SSF143555 157 267 1.7E-15 T 11-10-2018 SYN_01044 49da436cdb247ef190ff6cc11b5a91db 268 Pfam PF01980 Uncharacterised protein family UPF0066 31 132 4.2E-31 T 11-10-2018 IPR023370 YaeB-like, N-terminal domain SYN_01044 49da436cdb247ef190ff6cc11b5a91db 268 Gene3D G3DSA:2.40.30.70 1 134 3.0E-37 T 11-10-2018 IPR036414 YaeB, N-terminal domain superfamily SYN_03162 319cdb4dd05957b9df333ac3f239602e 344 SUPERFAMILY SSF52518 11 216 2.57E-50 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold SYN_03162 319cdb4dd05957b9df333ac3f239602e 344 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 12 207 6.2E-46 T 11-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 SYN_03162 319cdb4dd05957b9df333ac3f239602e 344 Gene3D G3DSA:3.40.50.920 224 337 3.6E-22 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 SYN_03162 319cdb4dd05957b9df333ac3f239602e 344 Gene3D G3DSA:3.40.50.970 1 151 1.4E-53 T 11-10-2018 SYN_03162 319cdb4dd05957b9df333ac3f239602e 344 SUPERFAMILY SSF52922 230 334 6.85E-13 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 Gene3D G3DSA:1.10.287.130 426 510 1.0E-26 T 11-10-2018 SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 Gene3D G3DSA:3.40.50.12740 813 954 2.6E-28 T 11-10-2018 SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 Gene3D G3DSA:3.40.50.12740 694 812 2.0E-34 T 11-10-2018 SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 SMART SM00091 150 215 0.013 T 11-10-2018 IPR000014 PAS domain SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 SMART SM00091 21 87 0.0043 T 11-10-2018 IPR000014 PAS domain SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 SMART SM00091 293 359 6.5E-7 T 11-10-2018 IPR000014 PAS domain SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 SUPERFAMILY SSF55785 39 145 1.74E-13 T 11-10-2018 IPR035965 PAS domain superfamily SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 Gene3D G3DSA:3.30.450.20 299 425 1.8E-24 T 11-10-2018 SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 SUPERFAMILY SSF55874 498 668 8.91E-45 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 Gene3D G3DSA:3.30.565.10 511 671 4.6E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 SUPERFAMILY SSF55785 134 275 3.14E-18 T 11-10-2018 IPR035965 PAS domain superfamily SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 Gene3D G3DSA:3.30.450.20 15 134 3.1E-15 T 11-10-2018 SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 SUPERFAMILY SSF52172 815 934 8.54E-26 T 11-10-2018 IPR011006 CheY-like superfamily SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 Gene3D G3DSA:3.30.450.20 140 287 8.0E-22 T 11-10-2018 SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 SMART SM00387 555 670 3.8E-35 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 Pfam PF13426 PAS domain 35 136 5.0E-7 T 11-10-2018 IPR000014 PAS domain SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 SUPERFAMILY SSF47384 426 510 1.35E-22 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 SUPERFAMILY SSF55785 277 414 1.1E-21 T 11-10-2018 IPR035965 PAS domain superfamily SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 SUPERFAMILY SSF52172 694 808 2.7E-32 T 11-10-2018 IPR011006 CheY-like superfamily SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 19 145 1.2E-11 T 11-10-2018 IPR000014 PAS domain SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 147 194 3.4E-7 T 11-10-2018 IPR000014 PAS domain SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 289 427 5.3E-12 T 11-10-2018 IPR000014 PAS domain SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 667 9.9E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 623 9.9E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 PRINTS PR00344 Bacterial sensor protein C-terminal signature 630 648 9.9E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 609 9.9E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 Pfam PF08448 PAS fold 159 282 6.8E-10 T 11-10-2018 IPR013656 PAS fold-4 SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 SMART SM00388 441 509 1.8E-21 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 Pfam PF00072 Response regulator receiver domain 697 803 1.4E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 Pfam PF00072 Response regulator receiver domain 816 930 6.9E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 556 668 8.3E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 Pfam PF00989 PAS fold 294 418 1.9E-11 T 11-10-2018 IPR013767 PAS fold GO:0006355 SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 SMART SM00448 695 805 4.4E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 SMART SM00448 814 932 5.5E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_01077 71b7584e578a3da64fd6a897d2f8af9e 955 Pfam PF00512 His Kinase A (phospho-acceptor) domain 441 508 4.5E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_00783 63da6cc727b874609c0896ded8c15134 790 SMART SM00464 22 218 2.8E-45 T 11-10-2018 IPR003111 Lon, substrate-binding domain SYN_00783 63da6cc727b874609c0896ded8c15134 790 Hamap MF_01973 Lon protease [lon]. 23 788 71.032 T 11-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 SYN_00783 63da6cc727b874609c0896ded8c15134 790 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 692 700 - T 11-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 SYN_00783 63da6cc727b874609c0896ded8c15134 790 SMART SM00382 364 509 3.6E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00783 63da6cc727b874609c0896ded8c15134 790 Gene3D G3DSA:3.40.50.300 329 507 1.9E-69 T 11-10-2018 SYN_00783 63da6cc727b874609c0896ded8c15134 790 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 368 505 1.1E-22 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 SYN_00783 63da6cc727b874609c0896ded8c15134 790 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 742 760 2.6E-52 T 11-10-2018 SYN_00783 63da6cc727b874609c0896ded8c15134 790 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 611 627 2.6E-52 T 11-10-2018 SYN_00783 63da6cc727b874609c0896ded8c15134 790 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 372 391 2.6E-52 T 11-10-2018 SYN_00783 63da6cc727b874609c0896ded8c15134 790 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 719 738 2.6E-52 T 11-10-2018 SYN_00783 63da6cc727b874609c0896ded8c15134 790 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 689 708 2.6E-52 T 11-10-2018 SYN_00783 63da6cc727b874609c0896ded8c15134 790 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 23 217 8.7E-35 T 11-10-2018 IPR003111 Lon, substrate-binding domain SYN_00783 63da6cc727b874609c0896ded8c15134 790 Gene3D G3DSA:1.20.58.1480 137 261 8.5E-40 T 11-10-2018 SYN_00783 63da6cc727b874609c0896ded8c15134 790 TIGRFAM TIGR00763 lon: endopeptidase La 24 787 5.6E-294 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 SYN_00783 63da6cc727b874609c0896ded8c15134 790 SUPERFAMILY SSF88697 23 213 2.11E-39 T 11-10-2018 IPR015947 PUA-like superfamily SYN_00783 63da6cc727b874609c0896ded8c15134 790 Gene3D G3DSA:3.30.230.10 609 790 1.0E-81 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SYN_00783 63da6cc727b874609c0896ded8c15134 790 Gene3D G3DSA:2.30.130.40 16 132 1.2E-25 T 11-10-2018 SYN_00783 63da6cc727b874609c0896ded8c15134 790 Gene3D G3DSA:1.10.8.60 508 600 1.9E-30 T 11-10-2018 SYN_00783 63da6cc727b874609c0896ded8c15134 790 PIRSF PIRSF001174 9 790 6.4E-299 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 SYN_00783 63da6cc727b874609c0896ded8c15134 790 SUPERFAMILY SSF54211 611 786 1.06E-55 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SYN_00783 63da6cc727b874609c0896ded8c15134 790 SUPERFAMILY SSF52540 319 596 6.15E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00783 63da6cc727b874609c0896ded8c15134 790 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 586 788 1.0E-87 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 SYN_00130 c1817939f9f6814ff0364a2a732bf00b 393 SUPERFAMILY SSF53756 15 384 1.08E-76 T 11-10-2018 SYN_00130 c1817939f9f6814ff0364a2a732bf00b 393 Gene3D G3DSA:3.40.50.2000 176 367 8.1E-69 T 11-10-2018 SYN_00130 c1817939f9f6814ff0364a2a732bf00b 393 Gene3D G3DSA:3.40.50.2000 35 380 8.1E-69 T 11-10-2018 SYN_00130 c1817939f9f6814ff0364a2a732bf00b 393 Pfam PF00534 Glycosyl transferases group 1 203 362 5.4E-30 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 SYN_00130 c1817939f9f6814ff0364a2a732bf00b 393 Pfam PF13439 Glycosyltransferase Family 4 26 179 5.1E-26 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 SYN_00007 0bd87ec2c85e2464c4629fb1c33707bc 525 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 345 433 5.3E-19 T 11-10-2018 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain SYN_00007 0bd87ec2c85e2464c4629fb1c33707bc 525 Pfam PF13271 Domain of unknown function (DUF4062) 19 103 8.2E-16 T 11-10-2018 IPR025139 Domain of unknown function DUF4062 SYN_00007 0bd87ec2c85e2464c4629fb1c33707bc 525 Gene3D G3DSA:3.30.565.60 284 435 1.9E-31 T 11-10-2018 IPR038475 RecG, C-terminal domain superfamily SYN_00749 9b20549a629989a302edeea18fa23e66 126 Pfam PF10861 Protein of Unknown function (DUF2784) 4 111 9.5E-37 T 11-10-2018 IPR021218 Protein of unknown function DUF2784 SYN_02543 687b0cd448f319e3661a845e426aff40 300 Pfam PF00990 Diguanylate cyclase, GGDEF domain 140 295 6.0E-45 T 11-10-2018 IPR000160 GGDEF domain SYN_02543 687b0cd448f319e3661a845e426aff40 300 Gene3D G3DSA:3.30.450.20 3 138 3.5E-22 T 11-10-2018 SYN_02543 687b0cd448f319e3661a845e426aff40 300 Gene3D G3DSA:3.30.70.270 139 299 4.4E-50 T 11-10-2018 SYN_02543 687b0cd448f319e3661a845e426aff40 300 Pfam PF13426 PAS domain 20 121 3.8E-13 T 11-10-2018 IPR000014 PAS domain SYN_02543 687b0cd448f319e3661a845e426aff40 300 SUPERFAMILY SSF55073 145 298 4.63E-44 T 11-10-2018 IPR029787 Nucleotide cyclase SYN_02543 687b0cd448f319e3661a845e426aff40 300 SMART SM00091 6 76 3.2E-5 T 11-10-2018 IPR000014 PAS domain SYN_02543 687b0cd448f319e3661a845e426aff40 300 SMART SM00267 129 300 3.2E-54 T 11-10-2018 IPR000160 GGDEF domain SYN_02543 687b0cd448f319e3661a845e426aff40 300 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 136 297 2.6E-44 T 11-10-2018 IPR000160 GGDEF domain SYN_02543 687b0cd448f319e3661a845e426aff40 300 SUPERFAMILY SSF55785 5 117 5.41E-22 T 11-10-2018 IPR035965 PAS domain superfamily SYN_02543 687b0cd448f319e3661a845e426aff40 300 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 6 116 1.4E-13 T 11-10-2018 IPR000014 PAS domain SYN_02957 a10077d52ce823d91e4936a04128f8c5 256 Pfam PF11769 Protein of unknown function (DUF3313) 53 239 2.8E-51 T 11-10-2018 IPR021747 Protein of unknown function DUF3313 SYN_00361 5e12c93a343531f06ea84f24632f1129 317 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 13 286 1.1E-20 T 11-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD SYN_00361 5e12c93a343531f06ea84f24632f1129 317 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 8 296 1.4E-42 T 11-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD SYN_01594 d8751f50b898f8a36a328d7a1865699d 147 SUPERFAMILY SSF52080 5 143 8.24E-43 T 11-10-2018 IPR036227 Ribosomal L18e/L15P superfamily SYN_01594 d8751f50b898f8a36a328d7a1865699d 147 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 3 143 2.8E-48 T 11-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01594 d8751f50b898f8a36a328d7a1865699d 147 ProSitePatterns PS00475 Ribosomal protein L15 signature. 110 140 - T 11-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_01594 d8751f50b898f8a36a328d7a1865699d 147 Gene3D G3DSA:3.100.10.10 71 146 1.7E-18 T 11-10-2018 SYN_01594 d8751f50b898f8a36a328d7a1865699d 147 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 146 21.048 T 11-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 SYN_01594 d8751f50b898f8a36a328d7a1865699d 147 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 27 144 4.3E-32 T 11-10-2018 IPR021131 Ribosomal protein L18e/L15P SYN_00232 08e1095b8f8eb6a1ad1d2fb70a3344b4 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 29.989 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SYN_00232 08e1095b8f8eb6a1ad1d2fb70a3344b4 142 Gene3D G3DSA:3.90.1180.10 1 142 4.3E-66 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 SYN_00232 08e1095b8f8eb6a1ad1d2fb70a3344b4 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 11-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 SYN_00232 08e1095b8f8eb6a1ad1d2fb70a3344b4 142 SUPERFAMILY SSF52161 1 139 3.14E-61 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 SYN_00232 08e1095b8f8eb6a1ad1d2fb70a3344b4 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 140 6.8E-64 T 11-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00232 08e1095b8f8eb6a1ad1d2fb70a3344b4 142 PIRSF PIRSF002181 1 141 1.6E-54 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SYN_00232 08e1095b8f8eb6a1ad1d2fb70a3344b4 142 Pfam PF00572 Ribosomal protein L13 14 137 7.3E-59 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SYN_02923 39a7464cf73525afc0aeb4c618d0bc70 1273 SUPERFAMILY SSF53697 573 940 5.97E-41 T 11-10-2018 SYN_02923 39a7464cf73525afc0aeb4c618d0bc70 1273 Gene3D G3DSA:3.40.50.10490 793 937 9.8E-86 T 11-10-2018 SYN_02923 39a7464cf73525afc0aeb4c618d0bc70 1273 SUPERFAMILY SSF56235 216 509 5.76E-22 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal SYN_02923 39a7464cf73525afc0aeb4c618d0bc70 1273 Pfam PF01380 SIS domain 634 762 6.4E-12 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 SYN_02923 39a7464cf73525afc0aeb4c618d0bc70 1273 Gene3D G3DSA:3.40.50.10490 576 792 9.8E-86 T 11-10-2018 SYN_02923 39a7464cf73525afc0aeb4c618d0bc70 1273 Pfam PF13522 Glutamine amidotransferase domain 338 496 8.1E-8 T 11-10-2018 SYN_00184 64d86d59192d03560fad7f02ea9d3ce3 332 SUPERFAMILY SSF55681 35 328 2.59E-78 T 11-10-2018 SYN_00184 64d86d59192d03560fad7f02ea9d3ce3 332 Pfam PF00152 tRNA synthetases class II (D, K and N) 35 329 1.4E-47 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_00184 64d86d59192d03560fad7f02ea9d3ce3 332 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 39 327 1.3E-103 T 11-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 SYN_00184 64d86d59192d03560fad7f02ea9d3ce3 332 Gene3D G3DSA:3.30.930.10 29 332 5.7E-93 T 11-10-2018 SYN_00639 5a1e32795e9d273e16ba2b3a5209b1cc 289 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 244 270 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SYN_00639 5a1e32795e9d273e16ba2b3a5209b1cc 289 PIRSF PIRSF000770 2 287 4.5E-38 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SYN_00639 5a1e32795e9d273e16ba2b3a5209b1cc 289 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 8 274 5.2E-102 T 11-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 SYN_00639 5a1e32795e9d273e16ba2b3a5209b1cc 289 Pfam PF00140 Sigma-70 factor, region 1.2 10 36 7.8E-6 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SYN_00639 5a1e32795e9d273e16ba2b3a5209b1cc 289 Gene3D G3DSA:1.10.10.10 206 274 2.5E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_00639 5a1e32795e9d273e16ba2b3a5209b1cc 289 Gene3D G3DSA:1.10.10.10 126 199 8.9E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_00639 5a1e32795e9d273e16ba2b3a5209b1cc 289 SUPERFAMILY SSF88946 9 115 9.73E-40 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 SYN_00639 5a1e32795e9d273e16ba2b3a5209b1cc 289 SUPERFAMILY SSF88659 182 274 1.35E-17 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like SYN_00639 5a1e32795e9d273e16ba2b3a5209b1cc 289 SUPERFAMILY SSF88659 127 194 4.36E-6 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like SYN_00639 5a1e32795e9d273e16ba2b3a5209b1cc 289 Pfam PF04542 Sigma-70 region 2 47 115 1.2E-15 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 SYN_00639 5a1e32795e9d273e16ba2b3a5209b1cc 289 Pfam PF04539 Sigma-70 region 3 132 202 4.5E-7 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 SYN_00639 5a1e32795e9d273e16ba2b3a5209b1cc 289 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 42 274 5.1E-29 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 SYN_00639 5a1e32795e9d273e16ba2b3a5209b1cc 289 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 71 84 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SYN_00639 5a1e32795e9d273e16ba2b3a5209b1cc 289 Gene3D G3DSA:1.10.601.10 6 114 1.2E-33 T 11-10-2018 SYN_00639 5a1e32795e9d273e16ba2b3a5209b1cc 289 Pfam PF04545 Sigma-70, region 4 221 271 6.0E-17 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 SYN_00639 5a1e32795e9d273e16ba2b3a5209b1cc 289 PRINTS PR00046 Major sigma-70 factor signature 225 237 3.8E-22 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SYN_00639 5a1e32795e9d273e16ba2b3a5209b1cc 289 PRINTS PR00046 Major sigma-70 factor signature 95 103 3.8E-22 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SYN_00639 5a1e32795e9d273e16ba2b3a5209b1cc 289 PRINTS PR00046 Major sigma-70 factor signature 244 259 3.8E-22 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SYN_00639 5a1e32795e9d273e16ba2b3a5209b1cc 289 PRINTS PR00046 Major sigma-70 factor signature 71 84 3.8E-22 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SYN_00639 5a1e32795e9d273e16ba2b3a5209b1cc 289 PRINTS PR00046 Major sigma-70 factor signature 259 270 3.8E-22 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SYN_01774 03069ad9e3674b17bc4e0ad22bd1c8ae 236 Gene3D G3DSA:3.30.70.60 146 232 6.1E-21 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 SYN_01774 03069ad9e3674b17bc4e0ad22bd1c8ae 236 Pfam PF04350 Pilus assembly protein, PilO 46 119 3.9E-11 T 11-10-2018 IPR007445 Pilus assembly protein, PilO SYN_01774 03069ad9e3674b17bc4e0ad22bd1c8ae 236 Pfam PF04350 Pilus assembly protein, PilO 153 221 2.1E-17 T 11-10-2018 IPR007445 Pilus assembly protein, PilO SYN_02214 de5faf0f0256c5390dbecc1a978c9761 452 Gene3D G3DSA:1.10.8.60 316 394 6.1E-29 T 11-10-2018 SYN_02214 de5faf0f0256c5390dbecc1a978c9761 452 Pfam PF02954 Bacterial regulatory protein, Fis family 408 449 1.4E-17 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_02214 de5faf0f0256c5390dbecc1a978c9761 452 SMART SM00382 165 308 2.1E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_02214 de5faf0f0256c5390dbecc1a978c9761 452 Gene3D G3DSA:3.40.50.300 137 315 8.8E-68 T 11-10-2018 SYN_02214 de5faf0f0256c5390dbecc1a978c9761 452 Gene3D G3DSA:3.40.50.2300 1 136 3.1E-42 T 11-10-2018 SYN_02214 de5faf0f0256c5390dbecc1a978c9761 452 Gene3D G3DSA:1.10.10.60 395 450 1.1E-18 T 11-10-2018 SYN_02214 de5faf0f0256c5390dbecc1a978c9761 452 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 169 182 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SYN_02214 de5faf0f0256c5390dbecc1a978c9761 452 SMART SM00448 5 116 4.1E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_02214 de5faf0f0256c5390dbecc1a978c9761 452 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 231 246 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SYN_02214 de5faf0f0256c5390dbecc1a978c9761 452 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site SYN_02214 de5faf0f0256c5390dbecc1a978c9761 452 SUPERFAMILY SSF52172 5 189 9.53E-49 T 11-10-2018 IPR011006 CheY-like superfamily SYN_02214 de5faf0f0256c5390dbecc1a978c9761 452 SUPERFAMILY SSF46689 358 450 2.9E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SYN_02214 de5faf0f0256c5390dbecc1a978c9761 452 Pfam PF00072 Response regulator receiver domain 7 115 4.4E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_02214 de5faf0f0256c5390dbecc1a978c9761 452 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 452 1.9E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_02214 de5faf0f0256c5390dbecc1a978c9761 452 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 415 432 1.9E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_02214 de5faf0f0256c5390dbecc1a978c9761 452 Pfam PF00158 Sigma-54 interaction domain 145 312 7.4E-72 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SYN_02214 de5faf0f0256c5390dbecc1a978c9761 452 SUPERFAMILY SSF52540 144 388 9.16E-77 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01942 eda7ca1c7507c9fdb4b951ebea4ac405 397 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 57 381 5.0E-49 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme SYN_01942 eda7ca1c7507c9fdb4b951ebea4ac405 397 Gene3D G3DSA:3.40.50.1100 57 386 2.6E-182 T 11-10-2018 SYN_01942 eda7ca1c7507c9fdb4b951ebea4ac405 397 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 84 98 - T 11-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SYN_01942 eda7ca1c7507c9fdb4b951ebea4ac405 397 SUPERFAMILY SSF53686 6 391 6.16E-147 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme SYN_01942 eda7ca1c7507c9fdb4b951ebea4ac405 397 PIRSF PIRSF001413 1 397 2.5E-161 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SYN_01942 eda7ca1c7507c9fdb4b951ebea4ac405 397 Gene3D G3DSA:3.40.50.1100 13 209 2.6E-182 T 11-10-2018 SYN_01942 eda7ca1c7507c9fdb4b951ebea4ac405 397 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 5 394 52.719 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SYN_01942 eda7ca1c7507c9fdb4b951ebea4ac405 397 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 10 393 5.9E-190 T 11-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SYN_00888 c3b93e363540df6fdc3a8dc2d08c3a0d 223 SUPERFAMILY SSF53328 9 202 6.93E-65 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SYN_00888 c3b93e363540df6fdc3a8dc2d08c3a0d 223 Pfam PF00551 Formyl transferase 10 187 5.6E-56 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SYN_00888 c3b93e363540df6fdc3a8dc2d08c3a0d 223 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 8 193 33.176 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 SYN_00888 c3b93e363540df6fdc3a8dc2d08c3a0d 223 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 9 196 4.7E-77 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 SYN_00888 c3b93e363540df6fdc3a8dc2d08c3a0d 223 Gene3D G3DSA:3.40.50.170 1 211 5.7E-84 T 11-10-2018 SYN_01183 e5fdc22a268594640842ff00be84d5c7 238 Gene3D G3DSA:3.90.1010.10 28 165 2.7E-26 T 11-10-2018 SYN_01183 e5fdc22a268594640842ff00be84d5c7 238 Pfam PF11823 Protein of unknown function (DUF3343) 170 227 1.9E-16 T 11-10-2018 IPR021778 Domain of unknown function DUF3343 SYN_01183 e5fdc22a268594640842ff00be84d5c7 238 Pfam PF01592 NifU-like N terminal domain 46 136 7.9E-17 T 11-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 SYN_01183 e5fdc22a268594640842ff00be84d5c7 238 SUPERFAMILY SSF82649 33 138 2.15E-23 T 11-10-2018 SYN_01990 27dd4bf6ea44a5c0af1e361c70df5b21 478 Gene3D G3DSA:3.40.50.300 28 189 5.2E-43 T 11-10-2018 SYN_01990 27dd4bf6ea44a5c0af1e361c70df5b21 478 SMART SM00382 74 191 9.3E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01990 27dd4bf6ea44a5c0af1e361c70df5b21 478 Gene3D G3DSA:1.10.8.60 191 265 2.0E-15 T 11-10-2018 SYN_01990 27dd4bf6ea44a5c0af1e361c70df5b21 478 Gene3D G3DSA:1.20.272.10 268 371 9.8E-49 T 11-10-2018 SYN_01990 27dd4bf6ea44a5c0af1e361c70df5b21 478 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 35 157 3.7E-16 T 11-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 SYN_01990 27dd4bf6ea44a5c0af1e361c70df5b21 478 SUPERFAMILY SSF52540 34 255 8.09E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01990 27dd4bf6ea44a5c0af1e361c70df5b21 478 Pfam PF16193 AAA C-terminal domain 215 293 1.3E-24 T 11-10-2018 IPR032423 AAA C-terminal domain SYN_01990 27dd4bf6ea44a5c0af1e361c70df5b21 478 Gene3D G3DSA:1.10.3710.10 372 474 3.0E-35 T 11-10-2018 SYN_01990 27dd4bf6ea44a5c0af1e361c70df5b21 478 SUPERFAMILY SSF48019 280 464 2.27E-76 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 SYN_01990 27dd4bf6ea44a5c0af1e361c70df5b21 478 Pfam PF12002 MgsA AAA+ ATPase C terminal 294 462 3.1E-73 T 11-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal SYN_01712 36e9fa6ae1f70c5200fa9c4cdd334cdd 166 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 5 61 2.0E-14 T 11-10-2018 SYN_01712 36e9fa6ae1f70c5200fa9c4cdd334cdd 166 SUPERFAMILY SSF55021 83 162 2.44E-17 T 11-10-2018 SYN_01712 36e9fa6ae1f70c5200fa9c4cdd334cdd 166 Gene3D G3DSA:3.30.70.260 3 82 3.8E-30 T 11-10-2018 SYN_01712 36e9fa6ae1f70c5200fa9c4cdd334cdd 166 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 5 160 1.5E-44 T 11-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 SYN_01712 36e9fa6ae1f70c5200fa9c4cdd334cdd 166 SUPERFAMILY SSF55021 6 79 1.41E-19 T 11-10-2018 SYN_01712 36e9fa6ae1f70c5200fa9c4cdd334cdd 166 Pfam PF13710 ACT domain 15 76 3.0E-13 T 11-10-2018 SYN_01712 36e9fa6ae1f70c5200fa9c4cdd334cdd 166 Gene3D G3DSA:3.30.70.1150 86 166 6.3E-16 T 11-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal SYN_01712 36e9fa6ae1f70c5200fa9c4cdd334cdd 166 Pfam PF10369 Small subunit of acetolactate synthase 87 159 9.7E-16 T 11-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 SYN_01090 8047cf433e1b735a446b6a505594d3c6 535 Gene3D G3DSA:1.10.10.60 465 531 8.7E-13 T 11-10-2018 SYN_01090 8047cf433e1b735a446b6a505594d3c6 535 SMART SM00382 239 383 9.9E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01090 8047cf433e1b735a446b6a505594d3c6 535 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 432 441 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site SYN_01090 8047cf433e1b735a446b6a505594d3c6 535 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 305 320 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SYN_01090 8047cf433e1b735a446b6a505594d3c6 535 SUPERFAMILY SSF55785 50 176 3.06E-20 T 11-10-2018 IPR035965 PAS domain superfamily SYN_01090 8047cf433e1b735a446b6a505594d3c6 535 Pfam PF02954 Bacterial regulatory protein, Fis family 483 527 5.4E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_01090 8047cf433e1b735a446b6a505594d3c6 535 SUPERFAMILY SSF46689 431 529 1.34E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SYN_01090 8047cf433e1b735a446b6a505594d3c6 535 Pfam PF00158 Sigma-54 interaction domain 219 385 3.5E-68 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SYN_01090 8047cf433e1b735a446b6a505594d3c6 535 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 243 256 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SYN_01090 8047cf433e1b735a446b6a505594d3c6 535 SMART SM00091 61 129 2.6E-4 T 11-10-2018 IPR000014 PAS domain SYN_01090 8047cf433e1b735a446b6a505594d3c6 535 Pfam PF00989 PAS fold 67 175 4.4E-10 T 11-10-2018 IPR013767 PAS fold GO:0006355 SYN_01090 8047cf433e1b735a446b6a505594d3c6 535 SMART SM00086 136 178 2.4E-5 T 11-10-2018 IPR001610 PAC motif SYN_01090 8047cf433e1b735a446b6a505594d3c6 535 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 58 185 2.5E-19 T 11-10-2018 IPR000014 PAS domain SYN_01090 8047cf433e1b735a446b6a505594d3c6 535 SUPERFAMILY SSF52540 218 456 4.14E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01090 8047cf433e1b735a446b6a505594d3c6 535 Gene3D G3DSA:3.30.450.20 48 204 4.5E-23 T 11-10-2018 SYN_01090 8047cf433e1b735a446b6a505594d3c6 535 Gene3D G3DSA:3.40.50.300 206 389 8.5E-64 T 11-10-2018 SYN_01090 8047cf433e1b735a446b6a505594d3c6 535 Gene3D G3DSA:1.10.8.60 390 456 8.6E-25 T 11-10-2018 SYN_02650 3f36de854562b984bfafa587a3b53cb0 201 SUPERFAMILY SSF51182 20 194 3.85E-63 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily SYN_02650 3f36de854562b984bfafa587a3b53cb0 201 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 24 193 3.3E-60 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SYN_02650 3f36de854562b984bfafa587a3b53cb0 201 Gene3D G3DSA:2.60.120.10 21 198 5.3E-62 T 11-10-2018 IPR014710 RmlC-like jelly roll fold SYN_02650 3f36de854562b984bfafa587a3b53cb0 201 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 18 190 9.0E-58 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SYN_02650 3f36de854562b984bfafa587a3b53cb0 201 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 23 193 3.6E-51 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SYN_01187 cab31e357579488d812d4845ccd4a4b5 283 Gene3D G3DSA:3.30.70.20 68 113 2.4E-12 T 11-10-2018 SYN_01187 cab31e357579488d812d4845ccd4a4b5 283 Pfam PF00037 4Fe-4S binding domain 63 85 4.9E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_01187 cab31e357579488d812d4845ccd4a4b5 283 Pfam PF00037 4Fe-4S binding domain 94 114 1.1E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_01187 cab31e357579488d812d4845ccd4a4b5 283 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 70 81 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_01187 cab31e357579488d812d4845ccd4a4b5 283 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_01187 cab31e357579488d812d4845ccd4a4b5 283 SUPERFAMILY SSF52540 2 265 1.06E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01187 cab31e357579488d812d4845ccd4a4b5 283 SUPERFAMILY SSF54862 47 122 3.98E-20 T 11-10-2018 SYN_01187 cab31e357579488d812d4845ccd4a4b5 283 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 258 3.1E-19 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SYN_02825 171872a1decee10ff26c99b1d9f71610 262 Gene3D G3DSA:1.10.287.130 30 106 9.7E-8 T 11-10-2018 SYN_02825 171872a1decee10ff26c99b1d9f71610 262 Gene3D G3DSA:3.30.565.10 107 202 9.7E-8 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_01464 c8e38464c46b43c3881846e775967fc6 836 SMART SM00028 269 302 0.65 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01464 c8e38464c46b43c3881846e775967fc6 836 SMART SM00028 661 694 72.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01464 c8e38464c46b43c3881846e775967fc6 836 SMART SM00028 418 451 140.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01464 c8e38464c46b43c3881846e775967fc6 836 SMART SM00028 381 414 61.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01464 c8e38464c46b43c3881846e775967fc6 836 SMART SM00028 697 730 320.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01464 c8e38464c46b43c3881846e775967fc6 836 SMART SM00028 343 376 130.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01464 c8e38464c46b43c3881846e775967fc6 836 SMART SM00028 504 537 410.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01464 c8e38464c46b43c3881846e775967fc6 836 Pfam PF13432 Tetratricopeptide repeat 310 370 3.9E-6 T 11-10-2018 SYN_01464 c8e38464c46b43c3881846e775967fc6 836 Pfam PF13432 Tetratricopeptide repeat 385 450 8.3E-6 T 11-10-2018 SYN_01464 c8e38464c46b43c3881846e775967fc6 836 Pfam PF13174 Tetratricopeptide repeat 273 302 1.8E-6 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01464 c8e38464c46b43c3881846e775967fc6 836 Gene3D G3DSA:1.25.40.10 641 810 1.4E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_01464 c8e38464c46b43c3881846e775967fc6 836 SUPERFAMILY SSF48452 383 769 6.01E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_01464 c8e38464c46b43c3881846e775967fc6 836 Gene3D G3DSA:1.25.40.10 276 378 8.7E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_01464 c8e38464c46b43c3881846e775967fc6 836 SUPERFAMILY SSF48452 201 456 8.8E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_01464 c8e38464c46b43c3881846e775967fc6 836 Gene3D G3DSA:1.25.40.10 188 275 2.5E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_02965 a2bd2d9584e40e023fc816b42c48a787 126 ProSitePatterns PS00605 ATP synthase c subunit signature. 79 100 - T 11-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02965 a2bd2d9584e40e023fc816b42c48a787 126 SUPERFAMILY SSF81333 46 118 1.06E-18 T 11-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily SYN_02965 a2bd2d9584e40e023fc816b42c48a787 126 Hamap MF_01396 ATP synthase subunit c [atpH]. 49 114 15.69 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02965 a2bd2d9584e40e023fc816b42c48a787 126 Pfam PF00137 ATP synthase subunit C 50 113 1.3E-17 T 11-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 SYN_02965 a2bd2d9584e40e023fc816b42c48a787 126 PRINTS PR00124 ATP synthase C subunit signature 51 70 4.8E-18 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02965 a2bd2d9584e40e023fc816b42c48a787 126 PRINTS PR00124 ATP synthase C subunit signature 89 114 4.8E-18 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02965 a2bd2d9584e40e023fc816b42c48a787 126 PRINTS PR00124 ATP synthase C subunit signature 72 87 4.8E-18 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02965 a2bd2d9584e40e023fc816b42c48a787 126 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 60 116 6.0E-13 T 11-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SYN_02965 a2bd2d9584e40e023fc816b42c48a787 126 Gene3D G3DSA:1.20.20.10 37 121 7.0E-26 T 11-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02288 6d72005cd963171cc403e37ed5ee1d43 370 Gene3D G3DSA:2.30.300.10 30 365 4.9E-101 T 11-10-2018 SYN_02288 6d72005cd963171cc403e37ed5ee1d43 370 Gene3D G3DSA:3.55.50.10 109 207 4.9E-101 T 11-10-2018 SYN_02288 6d72005cd963171cc403e37ed5ee1d43 370 PIRSF PIRSF004440 19 370 1.1E-143 T 11-10-2018 IPR026276 Baseplate protein GpP SYN_02288 6d72005cd963171cc403e37ed5ee1d43 370 SUPERFAMILY SSF69279 195 366 1.47E-32 T 11-10-2018 SYN_02288 6d72005cd963171cc403e37ed5ee1d43 370 SUPERFAMILY SSF69279 25 207 2.15E-34 T 11-10-2018 SYN_02288 6d72005cd963171cc403e37ed5ee1d43 370 Gene3D G3DSA:3.30.1920.10 237 306 4.9E-101 T 11-10-2018 IPR023399 Baseplate-like, two-layer sandwich fold SYN_01733 1e413217bfa90ab1c9455d5e16ad3397 428 SUPERFAMILY SSF54826 4 137 7.23E-55 T 11-10-2018 SYN_01733 1e413217bfa90ab1c9455d5e16ad3397 428 PRINTS PR00148 Enolase signature 335 349 8.9E-46 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SYN_01733 1e413217bfa90ab1c9455d5e16ad3397 428 PRINTS PR00148 Enolase signature 364 381 8.9E-46 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SYN_01733 1e413217bfa90ab1c9455d5e16ad3397 428 PRINTS PR00148 Enolase signature 37 51 8.9E-46 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SYN_01733 1e413217bfa90ab1c9455d5e16ad3397 428 PRINTS PR00148 Enolase signature 161 174 8.9E-46 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SYN_01733 1e413217bfa90ab1c9455d5e16ad3397 428 PRINTS PR00148 Enolase signature 107 123 8.9E-46 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SYN_01733 1e413217bfa90ab1c9455d5e16ad3397 428 PRINTS PR00148 Enolase signature 312 323 8.9E-46 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SYN_01733 1e413217bfa90ab1c9455d5e16ad3397 428 SUPERFAMILY SSF51604 141 425 1.26E-127 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily SYN_01733 1e413217bfa90ab1c9455d5e16ad3397 428 Pfam PF03952 Enolase, N-terminal domain 4 134 5.9E-58 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SYN_01733 1e413217bfa90ab1c9455d5e16ad3397 428 Pfam PF00113 Enolase, C-terminal TIM barrel domain 142 424 5.7E-132 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SYN_01733 1e413217bfa90ab1c9455d5e16ad3397 428 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 425 3.5E-207 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SYN_01733 1e413217bfa90ab1c9455d5e16ad3397 428 SMART SM01192 139 426 8.2E-218 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SYN_01733 1e413217bfa90ab1c9455d5e16ad3397 428 Hamap MF_00318 Enolase [eno]. 2 412 44.888 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SYN_01733 1e413217bfa90ab1c9455d5e16ad3397 428 ProSitePatterns PS00164 Enolase signature. 335 348 - T 11-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_01733 1e413217bfa90ab1c9455d5e16ad3397 428 PIRSF PIRSF001400 1 425 6.4E-193 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SYN_01733 1e413217bfa90ab1c9455d5e16ad3397 428 Gene3D G3DSA:3.20.20.120 129 428 1.2E-136 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily SYN_01733 1e413217bfa90ab1c9455d5e16ad3397 428 SMART SM01193 4 134 3.4E-92 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SYN_01733 1e413217bfa90ab1c9455d5e16ad3397 428 Gene3D G3DSA:3.30.390.10 1 126 7.2E-55 T 11-10-2018 IPR029017 Enolase-like, N-terminal SYN_02566 e318473f7719ff7b1000b7b7fec4aef3 412 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 157 173 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site SYN_02566 e318473f7719ff7b1000b7b7fec4aef3 412 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 258 369 6.4E-27 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal SYN_02566 e318473f7719ff7b1000b7b7fec4aef3 412 SUPERFAMILY SSF53901 7 409 1.49E-51 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 SYN_02566 e318473f7719ff7b1000b7b7fec4aef3 412 SMART SM00825 Beta-ketoacyl synthase 14 412 3.4E-12 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SYN_02566 e318473f7719ff7b1000b7b7fec4aef3 412 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 162 180 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 SYN_02566 e318473f7719ff7b1000b7b7fec4aef3 412 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 12 249 2.6E-37 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal SYN_02566 e318473f7719ff7b1000b7b7fec4aef3 412 Gene3D G3DSA:3.40.47.10 5 258 5.3E-59 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 SYN_02566 e318473f7719ff7b1000b7b7fec4aef3 412 Gene3D G3DSA:3.40.47.10 263 406 4.6E-34 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 SYN_01554 f6ac93331e6d3f8bb0ceb5933d8ffa16 323 PIRSF PIRSF002786 5 323 1.0E-37 T 11-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 SYN_01554 f6ac93331e6d3f8bb0ceb5933d8ffa16 323 Gene3D G3DSA:1.10.40.60 220 282 2.6E-13 T 11-10-2018 IPR038072 GspK, central domain superfamily SYN_01554 f6ac93331e6d3f8bb0ceb5933d8ffa16 323 Gene3D G3DSA:3.30.1300.30 51 306 2.6E-13 T 11-10-2018 SYN_01554 f6ac93331e6d3f8bb0ceb5933d8ffa16 323 Pfam PF03934 Type II secretion system (T2SS), protein K 36 311 4.5E-29 T 11-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 SYN_01554 f6ac93331e6d3f8bb0ceb5933d8ffa16 323 Gene3D G3DSA:1.10.40.60 107 219 2.6E-13 T 11-10-2018 IPR038072 GspK, central domain superfamily SYN_02145 de9d850a98e424e177684a8f67b6e17f 725 SUPERFAMILY SSF54106 517 561 1.27E-7 T 11-10-2018 SYN_02145 de9d850a98e424e177684a8f67b6e17f 725 Gene3D G3DSA:3.40.630.40 155 390 4.0E-69 T 11-10-2018 SYN_02145 de9d850a98e424e177684a8f67b6e17f 725 SUPERFAMILY SSF53187 167 386 4.08E-48 T 11-10-2018 SYN_02145 de9d850a98e424e177684a8f67b6e17f 725 SUPERFAMILY SSF54106 439 483 5.36E-8 T 11-10-2018 SYN_02145 de9d850a98e424e177684a8f67b6e17f 725 SMART SM00257 675 719 3.7E-11 T 11-10-2018 IPR018392 LysM domain SYN_02145 de9d850a98e424e177684a8f67b6e17f 725 SMART SM00257 518 562 5.1E-8 T 11-10-2018 IPR018392 LysM domain SYN_02145 de9d850a98e424e177684a8f67b6e17f 725 SMART SM00257 440 484 7.3E-10 T 11-10-2018 IPR018392 LysM domain SYN_02145 de9d850a98e424e177684a8f67b6e17f 725 SMART SM00257 600 644 1.6E-12 T 11-10-2018 IPR018392 LysM domain SYN_02145 de9d850a98e424e177684a8f67b6e17f 725 Gene3D G3DSA:3.10.350.10 585 660 1.1E-13 T 11-10-2018 IPR036779 LysM domain superfamily SYN_02145 de9d850a98e424e177684a8f67b6e17f 725 Gene3D G3DSA:3.10.350.10 507 569 1.3E-10 T 11-10-2018 IPR036779 LysM domain superfamily SYN_02145 de9d850a98e424e177684a8f67b6e17f 725 Gene3D G3DSA:3.10.350.10 664 723 8.6E-13 T 11-10-2018 IPR036779 LysM domain superfamily SYN_02145 de9d850a98e424e177684a8f67b6e17f 725 Gene3D G3DSA:3.10.350.10 426 499 2.8E-11 T 11-10-2018 IPR036779 LysM domain superfamily SYN_02145 de9d850a98e424e177684a8f67b6e17f 725 SUPERFAMILY SSF54106 674 720 3.27E-9 T 11-10-2018 SYN_02145 de9d850a98e424e177684a8f67b6e17f 725 SMART SM00646 229 384 3.3E-44 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 SYN_02145 de9d850a98e424e177684a8f67b6e17f 725 SUPERFAMILY SSF54106 600 644 2.75E-8 T 11-10-2018 SYN_02145 de9d850a98e424e177684a8f67b6e17f 725 Gene3D G3DSA:2.60.40.3500 36 146 1.3E-7 T 11-10-2018 SYN_02145 de9d850a98e424e177684a8f67b6e17f 725 Pfam PF01476 LysM domain 519 561 7.6E-7 T 11-10-2018 IPR018392 LysM domain SYN_02145 de9d850a98e424e177684a8f67b6e17f 725 Pfam PF01476 LysM domain 441 483 1.1E-9 T 11-10-2018 IPR018392 LysM domain SYN_02145 de9d850a98e424e177684a8f67b6e17f 725 Pfam PF01476 LysM domain 676 719 1.9E-10 T 11-10-2018 IPR018392 LysM domain SYN_02145 de9d850a98e424e177684a8f67b6e17f 725 Pfam PF01476 LysM domain 601 644 2.2E-11 T 11-10-2018 IPR018392 LysM domain SYN_02145 de9d850a98e424e177684a8f67b6e17f 725 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 169 384 1.4E-45 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 SYN_02659 25da0f5022a6561f1bba09e6fb246a8a 293 Gene3D G3DSA:3.90.550.10 2 237 5.0E-38 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_02659 25da0f5022a6561f1bba09e6fb246a8a 293 Pfam PF00535 Glycosyl transferase family 2 6 117 2.2E-20 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 SYN_02659 25da0f5022a6561f1bba09e6fb246a8a 293 SUPERFAMILY SSF53448 6 220 6.51E-36 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_00030 4789a78b70c56f0334e4e065557b1cbe 134 Gene3D G3DSA:2.60.40.790 2 133 2.3E-27 T 11-10-2018 IPR008978 HSP20-like chaperone SYN_00030 4789a78b70c56f0334e4e065557b1cbe 134 SUPERFAMILY SSF49764 23 132 6.11E-29 T 11-10-2018 IPR008978 HSP20-like chaperone SYN_00030 4789a78b70c56f0334e4e065557b1cbe 134 Pfam PF00011 Hsp20/alpha crystallin family 33 131 1.8E-17 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain SYN_02839 4bb483bce1d46ed53d26b3db0934505c 518 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 14 499 1.4E-88 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G SYN_02839 4bb483bce1d46ed53d26b3db0934505c 518 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 22 42 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site SYN_02839 4bb483bce1d46ed53d26b3db0934505c 518 Pfam PF07559 Flagellar basal body protein FlaE 186 399 4.6E-9 T 11-10-2018 IPR011491 Flagellar hook protein FlgE SYN_02839 4bb483bce1d46ed53d26b3db0934505c 518 SUPERFAMILY SSF117143 94 478 1.96E-57 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like SYN_02839 4bb483bce1d46ed53d26b3db0934505c 518 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 440 515 1.0E-17 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SYN_02839 4bb483bce1d46ed53d26b3db0934505c 518 Pfam PF00460 Flagella basal body rod protein 16 46 1.4E-10 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SYN_02839 4bb483bce1d46ed53d26b3db0934505c 518 Gene3D G3DSA:2.60.98.20 156 295 2.1E-6 T 11-10-2018 IPR037058 Flagellar hook protein FlgE superfamily SYN_00044 954d9675352436d2419e25f993e4b00f 239 Gene3D G3DSA:1.25.40.10 38 239 5.0E-51 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00044 954d9675352436d2419e25f993e4b00f 239 SMART SM00028 173 206 320.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00044 954d9675352436d2419e25f993e4b00f 239 SMART SM00028 77 110 46.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00044 954d9675352436d2419e25f993e4b00f 239 SMART SM00028 40 73 2.1 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00044 954d9675352436d2419e25f993e4b00f 239 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 13 237 2.9E-67 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD SYN_00044 954d9675352436d2419e25f993e4b00f 239 SUPERFAMILY SSF48452 39 155 4.61E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00044 954d9675352436d2419e25f993e4b00f 239 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 11 239 29.061 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD SYN_00044 954d9675352436d2419e25f993e4b00f 239 Pfam PF13525 Outer membrane lipoprotein 39 231 1.7E-44 T 11-10-2018 IPR039565 Outer membrane lipoprotein BamD-like SYN_02597 abaad89954531b0ae7e3a8a5bab70cfc 531 Gene3D G3DSA:3.40.1080.10 283 528 5.1E-95 T 11-10-2018 SYN_02597 abaad89954531b0ae7e3a8a5bab70cfc 531 SUPERFAMILY SSF100950 284 525 7.07E-68 T 11-10-2018 IPR037171 NagB/RpiA transferase-like SYN_02597 abaad89954531b0ae7e3a8a5bab70cfc 531 Pfam PF01144 Coenzyme A transferase 14 252 5.8E-26 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 SYN_02597 abaad89954531b0ae7e3a8a5bab70cfc 531 SUPERFAMILY SSF100950 10 269 3.94E-79 T 11-10-2018 IPR037171 NagB/RpiA transferase-like SYN_02597 abaad89954531b0ae7e3a8a5bab70cfc 531 SMART SM00882 12 252 1.2E-53 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 SYN_02597 abaad89954531b0ae7e3a8a5bab70cfc 531 SMART SM00882 289 496 6.8E-4 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 SYN_02597 abaad89954531b0ae7e3a8a5bab70cfc 531 Gene3D G3DSA:3.40.1080.10 2 275 6.2E-95 T 11-10-2018 SYN_02597 abaad89954531b0ae7e3a8a5bab70cfc 531 PIRSF PIRSF000858 7 530 3.8E-191 T 11-10-2018 IPR014388 3-oxoacid CoA-transferase GO:0008410|GO:0046952 Reactome: R-HSA-77108 SYN_02587 8bf8867d24006a43c69592489daa6c3a 414 SUPERFAMILY SSF47203 259 411 1.1E-51 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 SYN_02587 8bf8867d24006a43c69592489daa6c3a 414 SUPERFAMILY SSF56645 36 271 2.75E-75 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 SYN_02587 8bf8867d24006a43c69592489daa6c3a 414 PIRSF PIRSF016578 20 132 1.3E-9 T 11-10-2018 SYN_02587 8bf8867d24006a43c69592489daa6c3a 414 PIRSF PIRSF016578 157 414 4.1E-18 T 11-10-2018 SYN_02587 8bf8867d24006a43c69592489daa6c3a 414 Gene3D G3DSA:1.10.540.10 28 148 5.7E-30 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 SYN_02587 8bf8867d24006a43c69592489daa6c3a 414 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 38 145 9.4E-25 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 SYN_02587 8bf8867d24006a43c69592489daa6c3a 414 Gene3D G3DSA:1.20.140.10 266 412 9.4E-48 T 11-10-2018 SYN_02587 8bf8867d24006a43c69592489daa6c3a 414 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 261 410 4.8E-42 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SYN_02587 8bf8867d24006a43c69592489daa6c3a 414 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 369 388 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 SYN_02587 8bf8867d24006a43c69592489daa6c3a 414 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 154 248 2.7E-29 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 SYN_02587 8bf8867d24006a43c69592489daa6c3a 414 Gene3D G3DSA:2.40.110.10 153 265 1.2E-45 T 11-10-2018 SYN_00396 536bfd4c7d63ab06835f591f3a091149 97 SUPERFAMILY SSF54909 1 94 2.79E-24 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel SYN_00396 536bfd4c7d63ab06835f591f3a091149 97 Gene3D G3DSA:3.30.70.100 1 95 1.5E-23 T 11-10-2018 SYN_00396 536bfd4c7d63ab06835f591f3a091149 97 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 75 1.0E-14 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain SYN_00193 9d3feb2009a7d33ce3c98fff1c4eef41 334 Gene3D G3DSA:3.20.20.370 100 334 1.1E-77 T 11-10-2018 SYN_00193 9d3feb2009a7d33ce3c98fff1c4eef41 334 SUPERFAMILY SSF88713 116 333 9.45E-67 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SYN_00193 9d3feb2009a7d33ce3c98fff1c4eef41 334 Pfam PF04748 Divergent polysaccharide deacetylase 119 333 1.6E-71 T 11-10-2018 IPR006837 Divergent polysaccharide deacetylase SYN_01937 e83f54783d6918fd92e04678c84b40a3 292 SUPERFAMILY SSF51735 120 284 5.71E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_01937 e83f54783d6918fd92e04678c84b40a3 292 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 24 284 3.1E-75 T 11-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 SYN_01937 e83f54783d6918fd92e04678c84b40a3 292 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 27 107 1.7E-27 T 11-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 SYN_01937 e83f54783d6918fd92e04678c84b40a3 292 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 22 282 32.391 T 11-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 SYN_01937 e83f54783d6918fd92e04678c84b40a3 292 Gene3D G3DSA:3.40.50.10860 25 273 1.1E-85 T 11-10-2018 SYN_01937 e83f54783d6918fd92e04678c84b40a3 292 SUPERFAMILY SSF53223 22 119 6.33E-30 T 11-10-2018 SYN_01937 e83f54783d6918fd92e04678c84b40a3 292 Gene3D G3DSA:3.40.50.720 119 250 1.1E-85 T 11-10-2018 SYN_01574 777a6bd2cc66ec24bc84cfc2cd94af09 695 Pfam PF03144 Elongation factor Tu domain 2 322 387 4.6E-14 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 SYN_01574 777a6bd2cc66ec24bc84cfc2cd94af09 695 Gene3D G3DSA:3.30.70.870 403 477 1.2E-28 T 11-10-2018 SYN_01574 777a6bd2cc66ec24bc84cfc2cd94af09 695 Pfam PF03764 Elongation factor G, domain IV 476 594 1.8E-40 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SYN_01574 777a6bd2cc66ec24bc84cfc2cd94af09 695 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 686 1.4E-292 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SYN_01574 777a6bd2cc66ec24bc84cfc2cd94af09 695 Hamap MF_00054_B Elongation factor G [fusA]. 4 687 107.007 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SYN_01574 777a6bd2cc66ec24bc84cfc2cd94af09 695 SUPERFAMILY SSF54211 479 595 5.56E-39 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SYN_01574 777a6bd2cc66ec24bc84cfc2cd94af09 695 SUPERFAMILY SSF52540 4 280 1.34E-95 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01574 777a6bd2cc66ec24bc84cfc2cd94af09 695 SMART SM00838 596 683 1.1E-46 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like SYN_01574 777a6bd2cc66ec24bc84cfc2cd94af09 695 Gene3D G3DSA:3.30.230.10 481 683 9.8E-84 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SYN_01574 777a6bd2cc66ec24bc84cfc2cd94af09 695 Pfam PF14492 Elongation Factor G, domain II 401 474 5.5E-32 T 11-10-2018 SYN_01574 777a6bd2cc66ec24bc84cfc2cd94af09 695 SUPERFAMILY SSF54980 599 687 3.55E-28 T 11-10-2018 IPR035647 EF-G domain III/V-like SYN_01574 777a6bd2cc66ec24bc84cfc2cd94af09 695 Gene3D G3DSA:3.30.70.240 600 670 9.8E-84 T 11-10-2018 SYN_01574 777a6bd2cc66ec24bc84cfc2cd94af09 695 PRINTS PR00315 GTP-binding elongation factor signature 10 23 1.1E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_01574 777a6bd2cc66ec24bc84cfc2cd94af09 695 PRINTS PR00315 GTP-binding elongation factor signature 59 67 1.1E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_01574 777a6bd2cc66ec24bc84cfc2cd94af09 695 PRINTS PR00315 GTP-binding elongation factor signature 95 106 1.1E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_01574 777a6bd2cc66ec24bc84cfc2cd94af09 695 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.1E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_01574 777a6bd2cc66ec24bc84cfc2cd94af09 695 PRINTS PR00315 GTP-binding elongation factor signature 79 89 1.1E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_01574 777a6bd2cc66ec24bc84cfc2cd94af09 695 Gene3D G3DSA:2.40.30.10 291 402 7.4E-30 T 11-10-2018 SYN_01574 777a6bd2cc66ec24bc84cfc2cd94af09 695 Gene3D G3DSA:3.40.50.300 1 290 8.5E-103 T 11-10-2018 SYN_01574 777a6bd2cc66ec24bc84cfc2cd94af09 695 SMART SM00889 477 594 1.5E-60 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SYN_01574 777a6bd2cc66ec24bc84cfc2cd94af09 695 Pfam PF00679 Elongation factor G C-terminus 596 682 4.2E-30 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like SYN_01574 777a6bd2cc66ec24bc84cfc2cd94af09 695 Pfam PF00009 Elongation factor Tu GTP binding domain 6 280 2.2E-61 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_01574 777a6bd2cc66ec24bc84cfc2cd94af09 695 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site SYN_01574 777a6bd2cc66ec24bc84cfc2cd94af09 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 180 2.7E-25 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 SYN_01574 777a6bd2cc66ec24bc84cfc2cd94af09 695 SUPERFAMILY SSF50447 264 391 2.25E-23 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily SYN_01574 777a6bd2cc66ec24bc84cfc2cd94af09 695 SUPERFAMILY SSF54980 399 476 4.68E-23 T 11-10-2018 IPR035647 EF-G domain III/V-like SYN_02137 3a3c3e815262ec89d664a80a9c5f86f9 352 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 33 50 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02137 3a3c3e815262ec89d664a80a9c5f86f9 352 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 224 273 9.9E-12 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02137 3a3c3e815262ec89d664a80a9c5f86f9 352 Gene3D G3DSA:3.30.70.20 127 209 2.9E-21 T 11-10-2018 SYN_02137 3a3c3e815262ec89d664a80a9c5f86f9 352 Pfam PF12838 4Fe-4S dicluster domain 147 205 1.0E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_02137 3a3c3e815262ec89d664a80a9c5f86f9 352 Pfam PF00384 Molybdopterin oxidoreductase 277 352 8.0E-16 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02137 3a3c3e815262ec89d664a80a9c5f86f9 352 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 84 120 1.7E-15 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02137 3a3c3e815262ec89d664a80a9c5f86f9 352 SUPERFAMILY SSF54292 4 75 5.13E-18 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 SYN_02137 3a3c3e815262ec89d664a80a9c5f86f9 352 Gene3D G3DSA:3.40.50.740 278 352 2.4E-30 T 11-10-2018 SYN_02137 3a3c3e815262ec89d664a80a9c5f86f9 352 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 76 5.6E-18 T 11-10-2018 SYN_02137 3a3c3e815262ec89d664a80a9c5f86f9 352 SMART SM00926 220 274 4.1E-12 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02137 3a3c3e815262ec89d664a80a9c5f86f9 352 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 191 202 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_02137 3a3c3e815262ec89d664a80a9c5f86f9 352 SMART SM00929 84 124 9.6E-16 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02137 3a3c3e815262ec89d664a80a9c5f86f9 352 SUPERFAMILY SSF54862 77 211 1.67E-33 T 11-10-2018 SYN_02137 3a3c3e815262ec89d664a80a9c5f86f9 352 Gene3D G3DSA:3.10.20.740 3 124 4.8E-39 T 11-10-2018 SYN_02137 3a3c3e815262ec89d664a80a9c5f86f9 352 Gene3D G3DSA:2.20.25.90 220 274 1.5E-15 T 11-10-2018 SYN_02137 3a3c3e815262ec89d664a80a9c5f86f9 352 SUPERFAMILY SSF53706 189 351 1.26E-55 T 11-10-2018 SYN_00167 9916f7a06ae650b12b85ffc7ceafbced 352 PIRSF PIRSF006641 7 352 2.5E-74 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 SYN_00167 9916f7a06ae650b12b85ffc7ceafbced 352 Gene3D G3DSA:1.10.150.300 110 192 1.0E-103 T 11-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 SYN_00167 9916f7a06ae650b12b85ffc7ceafbced 352 Pfam PF06071 Protein of unknown function (DUF933) 268 351 5.6E-37 T 11-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 SYN_00167 9916f7a06ae650b12b85ffc7ceafbced 352 SUPERFAMILY SSF81271 268 352 1.07E-31 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SYN_00167 9916f7a06ae650b12b85ffc7ceafbced 352 Gene3D G3DSA:3.40.50.300 12 266 1.0E-103 T 11-10-2018 SYN_00167 9916f7a06ae650b12b85ffc7ceafbced 352 Gene3D G3DSA:3.10.20.30 51 351 1.0E-103 T 11-10-2018 IPR012675 Beta-grasp domain superfamily SYN_00167 9916f7a06ae650b12b85ffc7ceafbced 352 SUPERFAMILY SSF52540 10 289 1.67E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01870 42f6c93735835ce9df024aeabd0fdb68 319 Pfam PF09673 Type-F conjugative transfer system pilin assembly protein 161 292 3.5E-27 T 11-10-2018 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC SYN_00054 1a7b0962d5e2f2f0dcd61f911786173b 146 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 137 5.0E-20 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I SYN_00054 1a7b0962d5e2f2f0dcd61f911786173b 146 Gene3D G3DSA:3.40.50.2300 1 141 1.0E-43 T 11-10-2018 SYN_00054 1a7b0962d5e2f2f0dcd61f911786173b 146 SMART SM00226 4 139 8.4E-39 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I SYN_00054 1a7b0962d5e2f2f0dcd61f911786173b 146 SUPERFAMILY SSF52788 4 138 4.45E-39 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily SYN_01034 ec146c3b3689483bc95ea1647954a94d 216 Gene3D G3DSA:3.20.20.370 1 214 2.7E-29 T 11-10-2018 SYN_01034 ec146c3b3689483bc95ea1647954a94d 216 Pfam PF01522 Polysaccharide deacetylase 5 128 5.5E-19 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 SYN_01034 ec146c3b3689483bc95ea1647954a94d 216 SUPERFAMILY SSF88713 7 202 8.23E-27 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SYN_00534 e6852a7808f78de2286977ff754a4902 399 SUPERFAMILY SSF56300 157 376 4.08E-35 T 11-10-2018 SYN_00534 e6852a7808f78de2286977ff754a4902 399 Gene3D G3DSA:3.60.21.10 156 346 2.2E-19 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like SYN_00534 e6852a7808f78de2286977ff754a4902 399 Pfam PF00149 Calcineurin-like phosphoesterase 157 321 9.2E-12 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 SYN_02161 966ef718bda25668dc260b64ef0aeff1 299 PIRSF PIRSF001365 6 298 4.8E-105 T 11-10-2018 IPR002220 DapA-like GO:0016829 SYN_02161 966ef718bda25668dc260b64ef0aeff1 299 SUPERFAMILY SSF51569 8 297 8.16E-111 T 11-10-2018 SYN_02161 966ef718bda25668dc260b64ef0aeff1 299 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 13 294 2.7E-115 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SYN_02161 966ef718bda25668dc260b64ef0aeff1 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 78 96 7.5E-36 T 11-10-2018 IPR002220 DapA-like GO:0016829 SYN_02161 966ef718bda25668dc260b64ef0aeff1 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 135 152 7.5E-36 T 11-10-2018 IPR002220 DapA-like GO:0016829 SYN_02161 966ef718bda25668dc260b64ef0aeff1 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 42 63 7.5E-36 T 11-10-2018 IPR002220 DapA-like GO:0016829 SYN_02161 966ef718bda25668dc260b64ef0aeff1 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 110 126 7.5E-36 T 11-10-2018 IPR002220 DapA-like GO:0016829 SYN_02161 966ef718bda25668dc260b64ef0aeff1 299 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 9 294 69.76 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SYN_02161 966ef718bda25668dc260b64ef0aeff1 299 Pfam PF00701 Dihydrodipicolinate synthetase family 10 293 3.4E-104 T 11-10-2018 IPR002220 DapA-like GO:0016829 SYN_02161 966ef718bda25668dc260b64ef0aeff1 299 Gene3D G3DSA:3.20.20.70 2 298 2.1E-121 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_02161 966ef718bda25668dc260b64ef0aeff1 299 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 45 62 - T 11-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 SYN_02161 966ef718bda25668dc260b64ef0aeff1 299 SMART SM01130 9 296 3.5E-153 T 11-10-2018 IPR002220 DapA-like GO:0016829 SYN_02161 966ef718bda25668dc260b64ef0aeff1 299 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 140 170 - T 11-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 SYN_02604 7abb808b93e0d0f4fa76c5b9c60c668f 478 Gene3D G3DSA:1.10.10.410 414 476 9.8E-24 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal SYN_02604 7abb808b93e0d0f4fa76c5b9c60c668f 478 Pfam PF02934 GatB/GatE catalytic domain 5 288 3.8E-89 T 11-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 SYN_02604 7abb808b93e0d0f4fa76c5b9c60c668f 478 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 474 1.4E-144 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 SYN_02604 7abb808b93e0d0f4fa76c5b9c60c668f 478 SUPERFAMILY SSF55931 4 295 2.35E-96 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 SYN_02604 7abb808b93e0d0f4fa76c5b9c60c668f 478 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 475 32.21 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 SYN_02604 7abb808b93e0d0f4fa76c5b9c60c668f 478 Pfam PF02637 GatB domain 328 474 2.2E-43 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 SYN_02604 7abb808b93e0d0f4fa76c5b9c60c668f 478 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 146 160 - T 11-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 SYN_02604 7abb808b93e0d0f4fa76c5b9c60c668f 478 SMART SM00845 327 474 7.4E-62 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 SYN_02604 7abb808b93e0d0f4fa76c5b9c60c668f 478 SUPERFAMILY SSF89095 296 402 1.44E-24 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 SYN_02604 7abb808b93e0d0f4fa76c5b9c60c668f 478 Gene3D G3DSA:1.10.150.380 296 413 5.7E-30 T 11-10-2018 SYN_01804 a13f7bf9d94161b6b5f30fd9622f521c 347 Gene3D G3DSA:3.60.15.10 11 336 1.7E-45 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_01804 a13f7bf9d94161b6b5f30fd9622f521c 347 Pfam PF12706 Beta-lactamase superfamily domain 237 312 1.6E-6 T 11-10-2018 IPR001279 Metallo-beta-lactamase SYN_01804 a13f7bf9d94161b6b5f30fd9622f521c 347 SUPERFAMILY SSF56281 17 332 1.09E-37 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_01909 77c453514dac2fd878185300c35c555a 542 PRINTS PR00298 60kDa chaperonin signature 350 375 3.4E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 SYN_01909 77c453514dac2fd878185300c35c555a 542 PRINTS PR00298 60kDa chaperonin signature 398 419 3.4E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 SYN_01909 77c453514dac2fd878185300c35c555a 542 PRINTS PR00298 60kDa chaperonin signature 27 53 3.4E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 SYN_01909 77c453514dac2fd878185300c35c555a 542 PRINTS PR00298 60kDa chaperonin signature 268 291 3.4E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 SYN_01909 77c453514dac2fd878185300c35c555a 542 PRINTS PR00298 60kDa chaperonin signature 83 110 3.4E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 SYN_01909 77c453514dac2fd878185300c35c555a 542 SUPERFAMILY SSF48592 7 520 4.08E-77 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily SYN_01909 77c453514dac2fd878185300c35c555a 542 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 11-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 SYN_01909 77c453514dac2fd878185300c35c555a 542 SUPERFAMILY SSF54849 138 206 5.04E-25 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily SYN_01909 77c453514dac2fd878185300c35c555a 542 Gene3D G3DSA:3.50.7.10 173 379 3.3E-236 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily SYN_01909 77c453514dac2fd878185300c35c555a 542 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 1.1E-261 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 SYN_01909 77c453514dac2fd878185300c35c555a 542 Gene3D G3DSA:3.30.260.10 138 410 3.3E-236 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily SYN_01909 77c453514dac2fd878185300c35c555a 542 Hamap MF_00600 60 kDa chaperonin [groL]. 2 541 41.672 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 SYN_01909 77c453514dac2fd878185300c35c555a 542 Gene3D G3DSA:1.10.560.10 9 520 3.3E-236 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily SYN_01909 77c453514dac2fd878185300c35c555a 542 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 8.5E-101 T 11-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 SYN_01909 77c453514dac2fd878185300c35c555a 542 SUPERFAMILY SSF52029 184 376 1.5E-85 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily SYN_01299 1ebce704fd46e2141f0e302733bb0212 354 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 297 304 - T 11-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 SYN_01299 1ebce704fd46e2141f0e302733bb0212 354 Gene3D G3DSA:3.40.190.10 165 249 4.8E-54 T 11-10-2018 SYN_01299 1ebce704fd46e2141f0e302733bb0212 354 Pfam PF00800 Prephenate dehydratase 86 262 4.1E-56 T 11-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 SYN_01299 1ebce704fd46e2141f0e302733bb0212 354 Gene3D G3DSA:1.20.59.10 3 83 7.1E-16 T 11-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 SYN_01299 1ebce704fd46e2141f0e302733bb0212 354 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 236 258 - T 11-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 SYN_01299 1ebce704fd46e2141f0e302733bb0212 354 Pfam PF01817 Chorismate mutase type II 7 80 1.5E-16 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 SYN_01299 1ebce704fd46e2141f0e302733bb0212 354 Pfam PF01842 ACT domain 272 335 2.2E-9 T 11-10-2018 IPR002912 ACT domain SYN_01299 1ebce704fd46e2141f0e302733bb0212 354 SUPERFAMILY SSF53850 86 267 1.3E-56 T 11-10-2018 SYN_01299 1ebce704fd46e2141f0e302733bb0212 354 PIRSF PIRSF001500 1 352 2.1E-97 T 11-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 SYN_01299 1ebce704fd46e2141f0e302733bb0212 354 Gene3D G3DSA:3.40.190.10 86 256 4.8E-54 T 11-10-2018 SYN_01299 1ebce704fd46e2141f0e302733bb0212 354 SUPERFAMILY SSF48600 2 81 1.25E-15 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 SYN_01299 1ebce704fd46e2141f0e302733bb0212 354 SUPERFAMILY SSF55021 262 349 3.52E-24 T 11-10-2018 SYN_01299 1ebce704fd46e2141f0e302733bb0212 354 Gene3D G3DSA:3.30.70.260 263 350 2.9E-29 T 11-10-2018 SYN_01299 1ebce704fd46e2141f0e302733bb0212 354 SMART SM00830 7 82 1.5E-22 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 PRINTS PR00942 Copper-transporting ATPase 1 signature 219 244 1.9E-14 T 11-10-2018 SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 PRINTS PR00942 Copper-transporting ATPase 1 signature 59 79 1.9E-14 T 11-10-2018 SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 PRINTS PR00942 Copper-transporting ATPase 1 signature 4 29 1.9E-14 T 11-10-2018 SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 PRINTS PR00942 Copper-transporting ATPase 1 signature 30 53 1.9E-14 T 11-10-2018 SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 PRINTS PR00942 Copper-transporting ATPase 1 signature 104 125 1.9E-14 T 11-10-2018 SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 Gene3D G3DSA:3.30.70.100 76 145 6.7E-20 T 11-10-2018 SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 218 816 1.3E-184 T 11-10-2018 SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 Pfam PF00122 E1-E2 ATPase 306 486 1.3E-59 T 11-10-2018 SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 81 144 7.3E-12 T 11-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 7 69 5.0E-12 T 11-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 Pfam PF00702 haloacid dehalogenase-like hydrolase 505 720 1.2E-41 T 11-10-2018 SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 SUPERFAMILY SSF55008 76 145 8.12E-19 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 Gene3D G3DSA:2.70.150.20 298 410 1.3E-43 T 11-10-2018 SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 SUPERFAMILY SSF56784 505 813 1.98E-62 T 11-10-2018 IPR036412 HAD-like superfamily SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 509 515 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 SUPERFAMILY SSF81653 308 405 5.36E-31 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 277 784 5.1E-97 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 Gene3D G3DSA:3.30.70.100 2 73 1.3E-21 T 11-10-2018 SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 ProSitePatterns PS01047 Heavy-metal-associated domain. 86 115 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 Gene3D G3DSA:3.40.50.1000 488 757 5.6E-93 T 11-10-2018 IPR023214 HAD superfamily SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 SUPERFAMILY SSF55008 4 73 3.27E-20 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 Pfam PF00403 Heavy-metal-associated domain 83 143 2.0E-11 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 Pfam PF00403 Heavy-metal-associated domain 7 67 8.0E-17 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 SUPERFAMILY SSF81665 271 498 2.48E-12 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 706 725 3.2E-32 T 11-10-2018 SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 729 741 3.2E-32 T 11-10-2018 SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 653 663 3.2E-32 T 11-10-2018 SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 355 369 3.2E-32 T 11-10-2018 SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 631 642 3.2E-32 T 11-10-2018 SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 507 521 3.2E-32 T 11-10-2018 SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 236 815 1.8E-197 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 Gene3D G3DSA:3.40.1110.10 518 638 5.6E-93 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 SYN_01290 a5f7a99197fb356fcccc0b38c8f159d7 826 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 SYN_02006 0556621a502b4519fc6bfbcd1f9c855a 321 PIRSF PIRSF006232 20 321 3.9E-94 T 11-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 SYN_02006 0556621a502b4519fc6bfbcd1f9c855a 321 SUPERFAMILY SSF51182 22 317 1.1E-82 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily SYN_02006 0556621a502b4519fc6bfbcd1f9c855a 321 Gene3D G3DSA:2.60.120.10 36 311 2.3E-91 T 11-10-2018 IPR014710 RmlC-like jelly roll fold SYN_02006 0556621a502b4519fc6bfbcd1f9c855a 321 Pfam PF05726 Pirin C-terminal cupin domain 195 316 1.5E-26 T 11-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 SYN_02006 0556621a502b4519fc6bfbcd1f9c855a 321 Gene3D G3DSA:2.60.120.10 162 285 2.3E-91 T 11-10-2018 IPR014710 RmlC-like jelly roll fold SYN_02006 0556621a502b4519fc6bfbcd1f9c855a 321 Pfam PF02678 Pirin 39 139 2.5E-35 T 11-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 SYN_02577 2d3d87722beab81f46520a0d3e2f0650 142 PIRSF PIRSF004681 4 142 5.6E-38 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 SYN_02577 2d3d87722beab81f46520a0d3e2f0650 142 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 13 142 6.8E-28 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 SYN_02577 2d3d87722beab81f46520a0d3e2f0650 142 Gene3D G3DSA:2.60.120.460 1 142 8.7E-47 T 11-10-2018 IPR035917 YjbQ-like superfamily SYN_02577 2d3d87722beab81f46520a0d3e2f0650 142 Pfam PF01894 Uncharacterised protein family UPF0047 23 138 7.9E-32 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 SYN_02577 2d3d87722beab81f46520a0d3e2f0650 142 SUPERFAMILY SSF111038 4 142 3.01E-42 T 11-10-2018 IPR035917 YjbQ-like superfamily SYN_02175 060ba9ebba65aca07c0fedc739ccc0e2 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 11-10-2018 IPR019844 Cold-shock conserved site SYN_02175 060ba9ebba65aca07c0fedc739ccc0e2 66 Gene3D G3DSA:2.40.50.140 1 64 3.1E-27 T 11-10-2018 SYN_02175 060ba9ebba65aca07c0fedc739ccc0e2 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 6.9E-28 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SYN_02175 060ba9ebba65aca07c0fedc739ccc0e2 66 PIRSF PIRSF002599 1 66 2.6E-23 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 SYN_02175 060ba9ebba65aca07c0fedc739ccc0e2 66 PRINTS PR00050 Cold shock protein signature 39 57 2.4E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SYN_02175 060ba9ebba65aca07c0fedc739ccc0e2 66 PRINTS PR00050 Cold shock protein signature 24 33 2.4E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SYN_02175 060ba9ebba65aca07c0fedc739ccc0e2 66 PRINTS PR00050 Cold shock protein signature 4 19 2.4E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SYN_02175 060ba9ebba65aca07c0fedc739ccc0e2 66 SMART SM00357 3 66 3.6E-24 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 SYN_02175 060ba9ebba65aca07c0fedc739ccc0e2 66 SUPERFAMILY SSF50249 2 65 6.86E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_01181 89ea379f630e205469f967c09818104d 455 Gene3D G3DSA:1.10.8.60 308 386 5.8E-27 T 11-10-2018 SYN_01181 89ea379f630e205469f967c09818104d 455 Pfam PF00158 Sigma-54 interaction domain 137 303 3.9E-67 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SYN_01181 89ea379f630e205469f967c09818104d 455 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site SYN_01181 89ea379f630e205469f967c09818104d 455 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 409 426 4.9E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_01181 89ea379f630e205469f967c09818104d 455 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 426 446 4.9E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_01181 89ea379f630e205469f967c09818104d 455 SUPERFAMILY SSF46689 351 445 6.27E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SYN_01181 89ea379f630e205469f967c09818104d 455 Gene3D G3DSA:3.30.450.20 1 118 2.1E-22 T 11-10-2018 SYN_01181 89ea379f630e205469f967c09818104d 455 Pfam PF13426 PAS domain 18 119 3.1E-13 T 11-10-2018 IPR000014 PAS domain SYN_01181 89ea379f630e205469f967c09818104d 455 Gene3D G3DSA:1.10.10.60 392 447 6.9E-14 T 11-10-2018 SYN_01181 89ea379f630e205469f967c09818104d 455 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 125 2.6E-14 T 11-10-2018 IPR000014 PAS domain SYN_01181 89ea379f630e205469f967c09818104d 455 SUPERFAMILY SSF52540 136 381 1.04E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01181 89ea379f630e205469f967c09818104d 455 Gene3D G3DSA:3.40.50.300 123 307 4.0E-66 T 11-10-2018 SYN_01181 89ea379f630e205469f967c09818104d 455 Pfam PF02954 Bacterial regulatory protein, Fis family 407 443 2.6E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_01181 89ea379f630e205469f967c09818104d 455 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SYN_01181 89ea379f630e205469f967c09818104d 455 SMART SM00091 7 72 1.5E-7 T 11-10-2018 IPR000014 PAS domain SYN_01181 89ea379f630e205469f967c09818104d 455 SUPERFAMILY SSF55785 6 113 6.63E-19 T 11-10-2018 IPR035965 PAS domain superfamily SYN_01181 89ea379f630e205469f967c09818104d 455 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SYN_01181 89ea379f630e205469f967c09818104d 455 SMART SM00382 157 304 7.3E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01093 7f4fff61cbe9d4d78c6002ffd52012dd 456 Pfam PF00158 Sigma-54 interaction domain 145 310 1.1E-71 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SYN_01093 7f4fff61cbe9d4d78c6002ffd52012dd 456 SMART SM00448 4 115 6.7E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_01093 7f4fff61cbe9d4d78c6002ffd52012dd 456 Gene3D G3DSA:3.40.50.300 137 315 3.0E-68 T 11-10-2018 SYN_01093 7f4fff61cbe9d4d78c6002ffd52012dd 456 SUPERFAMILY SSF52172 1 190 5.69E-50 T 11-10-2018 IPR011006 CheY-like superfamily SYN_01093 7f4fff61cbe9d4d78c6002ffd52012dd 456 Gene3D G3DSA:1.10.10.60 397 456 3.3E-16 T 11-10-2018 SYN_01093 7f4fff61cbe9d4d78c6002ffd52012dd 456 SUPERFAMILY SSF52540 145 387 7.06E-77 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01093 7f4fff61cbe9d4d78c6002ffd52012dd 456 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site SYN_01093 7f4fff61cbe9d4d78c6002ffd52012dd 456 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 169 182 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SYN_01093 7f4fff61cbe9d4d78c6002ffd52012dd 456 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 231 246 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SYN_01093 7f4fff61cbe9d4d78c6002ffd52012dd 456 Gene3D G3DSA:3.40.50.2300 1 136 2.0E-39 T 11-10-2018 SYN_01093 7f4fff61cbe9d4d78c6002ffd52012dd 456 Pfam PF02954 Bacterial regulatory protein, Fis family 412 452 1.4E-15 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_01093 7f4fff61cbe9d4d78c6002ffd52012dd 456 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 435 455 3.7E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_01093 7f4fff61cbe9d4d78c6002ffd52012dd 456 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 418 435 3.7E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_01093 7f4fff61cbe9d4d78c6002ffd52012dd 456 Gene3D G3DSA:1.10.8.60 316 393 3.2E-29 T 11-10-2018 SYN_01093 7f4fff61cbe9d4d78c6002ffd52012dd 456 SMART SM00382 165 308 4.2E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01093 7f4fff61cbe9d4d78c6002ffd52012dd 456 SUPERFAMILY SSF46689 359 454 2.11E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SYN_01093 7f4fff61cbe9d4d78c6002ffd52012dd 456 Pfam PF00072 Response regulator receiver domain 6 113 3.0E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00800 7a35a82b90ba4e6017a4a391dfe2daee 137 Gene3D G3DSA:3.30.70.260 2 80 7.4E-10 T 11-10-2018 SYN_00800 7a35a82b90ba4e6017a4a391dfe2daee 137 Gene3D G3DSA:3.30.70.20 81 134 1.0E-16 T 11-10-2018 SYN_00800 7a35a82b90ba4e6017a4a391dfe2daee 137 SUPERFAMILY SSF54862 79 134 1.62E-23 T 11-10-2018 SYN_00800 7a35a82b90ba4e6017a4a391dfe2daee 137 SMART SM00930 2 74 1.7E-18 T 11-10-2018 IPR018449 NIL domain SYN_00800 7a35a82b90ba4e6017a4a391dfe2daee 137 Pfam PF12838 4Fe-4S dicluster domain 84 130 7.2E-11 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_00800 7a35a82b90ba4e6017a4a391dfe2daee 137 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 116 127 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_00800 7a35a82b90ba4e6017a4a391dfe2daee 137 SUPERFAMILY SSF55021 5 75 8.39E-15 T 11-10-2018 SYN_00800 7a35a82b90ba4e6017a4a391dfe2daee 137 Pfam PF09383 NIL domain 8 72 8.5E-13 T 11-10-2018 IPR018449 NIL domain SYN_00194 fed3a385e02d3d128b7eab8d4b12fb4b 435 Gene3D G3DSA:3.30.750.44 40 340 7.0E-96 T 11-10-2018 SYN_00194 fed3a385e02d3d128b7eab8d4b12fb4b 435 SUPERFAMILY SSF50156 88 183 2.08E-19 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 SYN_00194 fed3a385e02d3d128b7eab8d4b12fb4b 435 Pfam PF13180 PDZ domain 100 171 3.7E-11 T 11-10-2018 IPR001478 PDZ domain GO:0005515 SYN_00194 fed3a385e02d3d128b7eab8d4b12fb4b 435 SMART SM00228 100 171 2.7E-15 T 11-10-2018 IPR001478 PDZ domain GO:0005515 SYN_00194 fed3a385e02d3d128b7eab8d4b12fb4b 435 Gene3D G3DSA:3.90.226.10 188 362 7.0E-96 T 11-10-2018 SYN_00194 fed3a385e02d3d128b7eab8d4b12fb4b 435 Gene3D G3DSA:2.30.42.10 100 187 7.0E-96 T 11-10-2018 SYN_00194 fed3a385e02d3d128b7eab8d4b12fb4b 435 Pfam PF03572 Peptidase family S41 199 364 3.9E-58 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 SYN_00194 fed3a385e02d3d128b7eab8d4b12fb4b 435 SMART SM00245 173 365 1.1E-75 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 SYN_00194 fed3a385e02d3d128b7eab8d4b12fb4b 435 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 53 377 2.5E-101 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 SYN_00194 fed3a385e02d3d128b7eab8d4b12fb4b 435 SUPERFAMILY SSF52096 37 369 2.65E-81 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily SYN_01351 621197c61cfcbb5c2a87156f171fd90e 346 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 187 205 4.6E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 SYN_01351 621197c61cfcbb5c2a87156f171fd90e 346 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 166 186 4.6E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 SYN_01351 621197c61cfcbb5c2a87156f171fd90e 346 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 216 231 4.6E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 SYN_01351 621197c61cfcbb5c2a87156f171fd90e 346 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 233 251 4.6E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 SYN_01351 621197c61cfcbb5c2a87156f171fd90e 346 Gene3D G3DSA:2.70.210.12 4 162 1.6E-61 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily SYN_01351 621197c61cfcbb5c2a87156f171fd90e 346 ProSitePatterns PS00905 GTP1/OBG family signature. 218 231 - T 11-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 SYN_01351 621197c61cfcbb5c2a87156f171fd90e 346 Pfam PF01018 GTP1/OBG 8 162 1.5E-60 T 11-10-2018 IPR006169 GTP1/OBG domain SYN_01351 621197c61cfcbb5c2a87156f171fd90e 346 SUPERFAMILY SSF52540 165 341 1.18E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01351 621197c61cfcbb5c2a87156f171fd90e 346 Pfam PF01926 50S ribosome-binding GTPase 165 289 1.3E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 SYN_01351 621197c61cfcbb5c2a87156f171fd90e 346 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 7 335 9.3E-139 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SYN_01351 621197c61cfcbb5c2a87156f171fd90e 346 PIRSF PIRSF002401 4 346 1.1E-135 T 11-10-2018 IPR035101 GTP-binding protein, Obg-type SYN_01351 621197c61cfcbb5c2a87156f171fd90e 346 Gene3D G3DSA:3.40.50.300 164 345 3.5E-52 T 11-10-2018 SYN_01351 621197c61cfcbb5c2a87156f171fd90e 346 SUPERFAMILY SSF82051 6 162 6.8E-57 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily SYN_01351 621197c61cfcbb5c2a87156f171fd90e 346 Hamap MF_01454 GTPase Obg [obg]. 6 336 47.586 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SYN_00474 45b3ad8251dc3d5742ddbc3030109acd 248 Pfam PF00731 AIR carboxylase 121 245 7.1E-16 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 SYN_00474 45b3ad8251dc3d5742ddbc3030109acd 248 SMART SM01001 119 248 2.0E-36 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 SYN_00474 45b3ad8251dc3d5742ddbc3030109acd 248 SUPERFAMILY SSF52255 119 247 4.32E-29 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 SYN_00474 45b3ad8251dc3d5742ddbc3030109acd 248 Gene3D G3DSA:3.40.50.7700 120 248 3.7E-35 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 SYN_00920 2127026a7b61edc39f11b7b725e9c66d 243 PIRSF PIRSF005650 5 243 2.1E-94 T 11-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 SYN_00920 2127026a7b61edc39f11b7b725e9c66d 243 Pfam PF00696 Amino acid kinase family 11 221 9.2E-26 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 SYN_00920 2127026a7b61edc39f11b7b725e9c66d 243 SUPERFAMILY SSF53633 8 241 1.31E-67 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily SYN_00920 2127026a7b61edc39f11b7b725e9c66d 243 Hamap MF_01220_B Uridylate kinase [pyrH]. 8 242 44.64 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 SYN_00920 2127026a7b61edc39f11b7b725e9c66d 243 Gene3D G3DSA:3.40.1160.10 5 243 2.8E-76 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily SYN_00920 2127026a7b61edc39f11b7b725e9c66d 243 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 10 241 8.8E-101 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 SYN_01508 f4f0b9ed4675ee221cae12bc4ab042b7 117 SMART SM00530 61 116 1.6E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SYN_01508 f4f0b9ed4675ee221cae12bc4ab042b7 117 Gene3D G3DSA:1.10.260.40 57 117 1.3E-15 T 11-10-2018 SYN_01508 f4f0b9ed4675ee221cae12bc4ab042b7 117 Pfam PF01381 Helix-turn-helix 62 112 4.1E-15 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SYN_01508 f4f0b9ed4675ee221cae12bc4ab042b7 117 SUPERFAMILY SSF47413 59 116 1.1E-14 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 SYN_02439 0c80c12a9966ff7750f66be571efd8bb 462 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 21 122 2.6E-21 T 11-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SYN_02439 0c80c12a9966ff7750f66be571efd8bb 462 SMART SM01210 351 446 5.3E-9 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SYN_02439 0c80c12a9966ff7750f66be571efd8bb 462 Gene3D G3DSA:3.30.470.20 209 350 2.6E-51 T 11-10-2018 SYN_02439 0c80c12a9966ff7750f66be571efd8bb 462 Gene3D G3DSA:3.30.1490.20 142 208 2.7E-11 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 SYN_02439 0c80c12a9966ff7750f66be571efd8bb 462 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 123 317 1.0E-55 T 11-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SYN_02439 0c80c12a9966ff7750f66be571efd8bb 462 SUPERFAMILY SSF52440 19 123 1.15E-22 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily SYN_02439 0c80c12a9966ff7750f66be571efd8bb 462 SUPERFAMILY SSF51246 351 442 3.06E-7 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 SYN_02439 0c80c12a9966ff7750f66be571efd8bb 462 SUPERFAMILY SSF56059 124 342 4.28E-42 T 11-10-2018 SYN_02439 0c80c12a9966ff7750f66be571efd8bb 462 Gene3D G3DSA:3.40.50.20 21 115 2.5E-23 T 11-10-2018 SYN_02439 0c80c12a9966ff7750f66be571efd8bb 462 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 352 443 6.1E-9 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SYN_02439 0c80c12a9966ff7750f66be571efd8bb 462 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 20 446 33.548 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SYN_02439 0c80c12a9966ff7750f66be571efd8bb 462 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 21 443 8.9E-127 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SYN_02439 0c80c12a9966ff7750f66be571efd8bb 462 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 311 318 - T 11-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 SYN_02439 0c80c12a9966ff7750f66be571efd8bb 462 SMART SM01209 123 317 2.7E-90 T 11-10-2018 SYN_00112 9df2725be294c75201295c91eed38643 939 SUPERFAMILY SSF55785 251 363 9.07E-21 T 11-10-2018 IPR035965 PAS domain superfamily SYN_00112 9df2725be294c75201295c91eed38643 939 Gene3D G3DSA:1.10.10.10 878 937 5.1E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_00112 9df2725be294c75201295c91eed38643 939 SUPERFAMILY SSF55785 652 779 1.36E-19 T 11-10-2018 IPR035965 PAS domain superfamily SYN_00112 9df2725be294c75201295c91eed38643 939 SMART SM00086 319 361 5.3E-8 T 11-10-2018 IPR001610 PAC motif SYN_00112 9df2725be294c75201295c91eed38643 939 SMART SM00086 612 654 0.0011 T 11-10-2018 IPR001610 PAC motif SYN_00112 9df2725be294c75201295c91eed38643 939 SMART SM00086 485 527 4.2 T 11-10-2018 IPR001610 PAC motif SYN_00112 9df2725be294c75201295c91eed38643 939 SMART SM00086 739 781 19.0 T 11-10-2018 IPR001610 PAC motif SYN_00112 9df2725be294c75201295c91eed38643 939 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 244 368 2.7E-18 T 11-10-2018 IPR000014 PAS domain SYN_00112 9df2725be294c75201295c91eed38643 939 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 663 788 2.3E-18 T 11-10-2018 IPR000014 PAS domain SYN_00112 9df2725be294c75201295c91eed38643 939 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 409 534 8.9E-19 T 11-10-2018 IPR000014 PAS domain SYN_00112 9df2725be294c75201295c91eed38643 939 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 544 661 5.8E-14 T 11-10-2018 IPR000014 PAS domain SYN_00112 9df2725be294c75201295c91eed38643 939 SUPERFAMILY SSF55785 523 642 1.33E-22 T 11-10-2018 IPR035965 PAS domain superfamily SYN_00112 9df2725be294c75201295c91eed38643 939 Gene3D G3DSA:3.30.450.20 243 375 2.8E-23 T 11-10-2018 SYN_00112 9df2725be294c75201295c91eed38643 939 Gene3D G3DSA:3.30.450.20 666 796 6.8E-22 T 11-10-2018 SYN_00112 9df2725be294c75201295c91eed38643 939 SMART SM00421 877 934 6.8E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_00112 9df2725be294c75201295c91eed38643 939 SMART SM00091 666 734 1.3 T 11-10-2018 IPR000014 PAS domain SYN_00112 9df2725be294c75201295c91eed38643 939 SMART SM00091 246 316 4.2E-4 T 11-10-2018 IPR000014 PAS domain SYN_00112 9df2725be294c75201295c91eed38643 939 SMART SM00091 539 606 3.4E-6 T 11-10-2018 IPR000014 PAS domain SYN_00112 9df2725be294c75201295c91eed38643 939 SMART SM00091 412 479 3.0E-4 T 11-10-2018 IPR000014 PAS domain SYN_00112 9df2725be294c75201295c91eed38643 939 Pfam PF00196 Bacterial regulatory proteins, luxR family 879 927 4.1E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_00112 9df2725be294c75201295c91eed38643 939 SUPERFAMILY SSF55785 397 525 1.92E-20 T 11-10-2018 IPR035965 PAS domain superfamily SYN_00112 9df2725be294c75201295c91eed38643 939 Pfam PF13188 PAS domain 413 460 2.5E-7 T 11-10-2018 IPR000014 PAS domain SYN_00112 9df2725be294c75201295c91eed38643 939 Gene3D G3DSA:3.30.450.20 398 540 4.0E-21 T 11-10-2018 SYN_00112 9df2725be294c75201295c91eed38643 939 Gene3D G3DSA:3.30.450.20 541 665 3.8E-21 T 11-10-2018 SYN_00112 9df2725be294c75201295c91eed38643 939 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 910 922 1.2E-5 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_00112 9df2725be294c75201295c91eed38643 939 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 880 894 1.2E-5 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_00112 9df2725be294c75201295c91eed38643 939 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 894 910 1.2E-5 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_00112 9df2725be294c75201295c91eed38643 939 Pfam PF13426 PAS domain 259 360 2.3E-10 T 11-10-2018 IPR000014 PAS domain SYN_00112 9df2725be294c75201295c91eed38643 939 Pfam PF13426 PAS domain 553 653 7.6E-13 T 11-10-2018 IPR000014 PAS domain SYN_00112 9df2725be294c75201295c91eed38643 939 Pfam PF13426 PAS domain 678 780 7.9E-8 T 11-10-2018 IPR000014 PAS domain SYN_00112 9df2725be294c75201295c91eed38643 939 Pfam PF10114 Sensory domain found in PocR 60 222 1.8E-44 T 11-10-2018 IPR018771 PocR domain SYN_00112 9df2725be294c75201295c91eed38643 939 SUPERFAMILY SSF46894 868 929 5.1E-12 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SYN_02784 ff7308b792820100e72ffe8da5b78b93 443 SUPERFAMILY SSF102735 8 133 4.19E-31 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 SYN_02784 ff7308b792820100e72ffe8da5b78b93 443 SUPERFAMILY SSF109998 256 431 5.49E-38 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily SYN_02784 ff7308b792820100e72ffe8da5b78b93 443 Hamap MF_00303 Trigger factor [tig]. 6 430 20.067 T 11-10-2018 IPR005215 Trigger factor GO:0015031 SYN_02784 ff7308b792820100e72ffe8da5b78b93 443 Gene3D G3DSA:3.10.50.40 155 254 1.5E-82 T 11-10-2018 SYN_02784 ff7308b792820100e72ffe8da5b78b93 443 Gene3D G3DSA:1.10.3120.10 121 429 1.5E-82 T 11-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 SYN_02784 ff7308b792820100e72ffe8da5b78b93 443 Pfam PF05697 Bacterial trigger factor protein (TF) 8 148 1.5E-33 T 11-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 SYN_02784 ff7308b792820100e72ffe8da5b78b93 443 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 163 244 3.4E-8 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain SYN_02784 ff7308b792820100e72ffe8da5b78b93 443 SUPERFAMILY SSF54534 137 255 7.27E-24 T 11-10-2018 SYN_02784 ff7308b792820100e72ffe8da5b78b93 443 Gene3D G3DSA:3.30.70.1050 4 120 6.0E-32 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 SYN_02784 ff7308b792820100e72ffe8da5b78b93 443 PIRSF PIRSF003095 6 443 3.0E-111 T 11-10-2018 IPR005215 Trigger factor GO:0015031 SYN_02784 ff7308b792820100e72ffe8da5b78b93 443 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 269 423 1.6E-34 T 11-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 SYN_02784 ff7308b792820100e72ffe8da5b78b93 443 TIGRFAM TIGR00115 tig: trigger factor 17 423 4.0E-126 T 11-10-2018 IPR005215 Trigger factor GO:0015031 SYN_01770 9f1788f614891dca8c6fc8fac0012503 223 Pfam PF13428 Tetratricopeptide repeat 145 183 7.7E-6 T 11-10-2018 SYN_01770 9f1788f614891dca8c6fc8fac0012503 223 Pfam PF13181 Tetratricopeptide repeat 72 102 0.015 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01770 9f1788f614891dca8c6fc8fac0012503 223 Gene3D G3DSA:1.25.40.10 6 121 2.0E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_01770 9f1788f614891dca8c6fc8fac0012503 223 SUPERFAMILY SSF48452 9 184 3.16E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_01770 9f1788f614891dca8c6fc8fac0012503 223 TIGRFAM TIGR00756 PPR: pentatricopeptide repeat domain 146 170 4.7E-4 T 11-10-2018 IPR002885 Pentatricopeptide repeat SYN_01770 9f1788f614891dca8c6fc8fac0012503 223 Gene3D G3DSA:1.25.40.10 143 220 3.3E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_02563 d261a3ba08e6ed4399db1335609a865a 456 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 7 453 51.24 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 SYN_02563 d261a3ba08e6ed4399db1335609a865a 456 Pfam PF00202 Aminotransferase class-III 35 447 8.6E-118 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SYN_02563 d261a3ba08e6ed4399db1335609a865a 456 SUPERFAMILY SSF53383 17 450 2.83E-128 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SYN_02563 d261a3ba08e6ed4399db1335609a865a 456 PIRSF PIRSF000521 25 453 4.0E-32 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SYN_02563 d261a3ba08e6ed4399db1335609a865a 456 Gene3D G3DSA:3.90.1150.10 17 450 3.9E-159 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SYN_02563 d261a3ba08e6ed4399db1335609a865a 456 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 19 450 1.1E-164 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 SYN_02563 d261a3ba08e6ed4399db1335609a865a 456 Gene3D G3DSA:3.40.640.10 69 348 3.9E-159 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SYN_01971 5dcb736a2bed88b9b15b8b79a604482d 160 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 24 123 5.4E-12 T 11-10-2018 SYN_01971 5dcb736a2bed88b9b15b8b79a604482d 160 Gene3D G3DSA:3.10.180.10 10 153 4.6E-27 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SYN_01971 5dcb736a2bed88b9b15b8b79a604482d 160 SUPERFAMILY SSF54593 18 154 1.69E-20 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SYN_02711 b9b063cdcaabc9b29a90e7435834f20d 356 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 9 348 1.9E-133 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 SYN_02711 b9b063cdcaabc9b29a90e7435834f20d 356 SUPERFAMILY SSF49493 258 344 1.83E-22 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SYN_02711 b9b063cdcaabc9b29a90e7435834f20d 356 Gene3D G3DSA:2.60.260.20 117 249 3.6E-34 T 11-10-2018 SYN_02711 b9b063cdcaabc9b29a90e7435834f20d 356 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 5 356 38.685 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 SYN_02711 b9b063cdcaabc9b29a90e7435834f20d 356 SUPERFAMILY SSF46565 6 105 1.3E-32 T 11-10-2018 IPR036869 Chaperone J-domain superfamily SYN_02711 b9b063cdcaabc9b29a90e7435834f20d 356 Pfam PF00226 DnaJ domain 9 70 3.3E-27 T 11-10-2018 IPR001623 DnaJ domain SYN_02711 b9b063cdcaabc9b29a90e7435834f20d 356 Gene3D G3DSA:1.10.287.110 5 115 2.2E-34 T 11-10-2018 IPR036869 Chaperone J-domain superfamily SYN_02711 b9b063cdcaabc9b29a90e7435834f20d 356 ProSitePatterns PS00636 Nt-dnaJ domain signature. 50 69 - T 11-10-2018 IPR018253 DnaJ domain, conserved site SYN_02711 b9b063cdcaabc9b29a90e7435834f20d 356 Pfam PF01556 DnaJ C terminal domain 121 333 2.8E-40 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal SYN_02711 b9b063cdcaabc9b29a90e7435834f20d 356 SUPERFAMILY SSF49493 115 260 8.24E-17 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SYN_02711 b9b063cdcaabc9b29a90e7435834f20d 356 SMART SM00271 7 65 7.9E-30 T 11-10-2018 IPR001623 DnaJ domain SYN_02711 b9b063cdcaabc9b29a90e7435834f20d 356 Gene3D G3DSA:2.60.260.20 254 353 1.6E-28 T 11-10-2018 SYN_02711 b9b063cdcaabc9b29a90e7435834f20d 356 PRINTS PR00625 DnaJ domain signature 45 65 2.9E-30 T 11-10-2018 IPR001623 DnaJ domain SYN_02711 b9b063cdcaabc9b29a90e7435834f20d 356 PRINTS PR00625 DnaJ domain signature 10 28 2.9E-30 T 11-10-2018 IPR001623 DnaJ domain SYN_02711 b9b063cdcaabc9b29a90e7435834f20d 356 PRINTS PR00625 DnaJ domain signature 28 43 2.9E-30 T 11-10-2018 IPR001623 DnaJ domain SYN_02711 b9b063cdcaabc9b29a90e7435834f20d 356 PRINTS PR00625 DnaJ domain signature 65 84 2.9E-30 T 11-10-2018 IPR001623 DnaJ domain SYN_02711 b9b063cdcaabc9b29a90e7435834f20d 356 Pfam PF00684 DnaJ central domain 147 207 1.6E-13 T 11-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SYN_02711 b9b063cdcaabc9b29a90e7435834f20d 356 Gene3D G3DSA:2.10.230.10 147 207 3.6E-34 T 11-10-2018 SYN_02711 b9b063cdcaabc9b29a90e7435834f20d 356 SUPERFAMILY SSF57938 134 209 7.19E-20 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily SYN_03151 fab9736fe2bf4f91ba7a01269288f1f7 151 Gene3D G3DSA:3.40.50.360 3 145 4.0E-28 T 11-10-2018 IPR029039 Flavoprotein-like superfamily SYN_03151 fab9736fe2bf4f91ba7a01269288f1f7 151 SUPERFAMILY SSF52218 1 145 3.15E-27 T 11-10-2018 IPR029039 Flavoprotein-like superfamily SYN_03151 fab9736fe2bf4f91ba7a01269288f1f7 151 Pfam PF03358 NADPH-dependent FMN reductase 3 102 5.6E-9 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 SYN_01900 d9888e6608bb2a64994d60e0efe8921a 526 SUPERFAMILY SSF53098 149 315 3.79E-8 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily SYN_01900 d9888e6608bb2a64994d60e0efe8921a 526 Pfam PF00665 Integrase core domain 148 270 1.4E-16 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 SYN_00640 bf2c227b88a655883d785d1057c49d7c 454 Gene3D G3DSA:3.40.50.300 172 452 6.6E-108 T 11-10-2018 SYN_00640 bf2c227b88a655883d785d1057c49d7c 454 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 14 447 1.5E-185 T 11-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 SYN_00640 bf2c227b88a655883d785d1057c49d7c 454 SUPERFAMILY SSF48024 12 123 3.14E-39 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 SYN_00640 bf2c227b88a655883d785d1057c49d7c 454 Pfam PF00772 DnaB-like helicase N terminal domain 14 115 3.1E-37 T 11-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 SYN_00640 bf2c227b88a655883d785d1057c49d7c 454 Pfam PF03796 DnaB-like helicase C terminal domain 189 445 1.7E-116 T 11-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 SYN_00640 bf2c227b88a655883d785d1057c49d7c 454 Gene3D G3DSA:1.10.860.10 6 170 2.1E-59 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal SYN_00640 bf2c227b88a655883d785d1057c49d7c 454 SUPERFAMILY SSF52540 188 438 2.49E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01679 ff2e6ec1b00364051187481594c3fa86 98 Pfam PF09853 Putative transposon-encoded protein (DUF2080) 67 95 1.7E-5 T 11-10-2018 IPR019205 Protein of unknown function DUF2080, transposon-encoded SYN_02946 c9e67c3af3f0986df660cb8f6eb179a2 516 Gene3D G3DSA:2.20.200.10 132 385 2.2E-139 T 11-10-2018 SYN_02946 c9e67c3af3f0986df660cb8f6eb179a2 516 Gene3D G3DSA:1.20.1600.10 85 497 2.2E-139 T 11-10-2018 SYN_02946 c9e67c3af3f0986df660cb8f6eb179a2 516 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 47 496 2.7E-121 T 11-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 SYN_02946 c9e67c3af3f0986df660cb8f6eb179a2 516 SUPERFAMILY SSF56954 33 497 1.44E-119 T 11-10-2018 SYN_02946 c9e67c3af3f0986df660cb8f6eb179a2 516 Pfam PF02321 Outer membrane efflux protein 314 494 1.3E-28 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SYN_02946 c9e67c3af3f0986df660cb8f6eb179a2 516 Pfam PF02321 Outer membrane efflux protein 96 287 5.9E-27 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SYN_02235 109df0dd51c610e41fec4088ced60253 341 SUPERFAMILY SSF52540 31 244 6.13E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02235 109df0dd51c610e41fec4088ced60253 341 Gene3D G3DSA:3.40.50.300 23 256 5.1E-39 T 11-10-2018 SYN_02235 109df0dd51c610e41fec4088ced60253 341 Pfam PF13481 AAA domain 23 194 3.1E-30 T 11-10-2018 SYN_02995 b6ec096fab7b358b198818847215aed3 361 Pfam PF01555 DNA methylase 3 184 8.7E-26 T 11-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 SYN_02995 b6ec096fab7b358b198818847215aed3 361 Gene3D G3DSA:2.40.50.90 274 360 7.4E-11 T 11-10-2018 IPR035437 SNase-like, OB-fold superfamily SYN_02995 b6ec096fab7b358b198818847215aed3 361 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 170 190 4.7E-17 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 SYN_02995 b6ec096fab7b358b198818847215aed3 361 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 128 145 4.7E-17 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 SYN_02995 b6ec096fab7b358b198818847215aed3 361 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 147 165 4.7E-17 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 SYN_02995 b6ec096fab7b358b198818847215aed3 361 Gene3D G3DSA:3.40.50.150 1 200 6.4E-44 T 11-10-2018 SYN_02995 b6ec096fab7b358b198818847215aed3 361 SUPERFAMILY SSF50199 257 358 1.28E-11 T 11-10-2018 SYN_02995 b6ec096fab7b358b198818847215aed3 361 SUPERFAMILY SSF53335 1 190 6.58E-36 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_02995 b6ec096fab7b358b198818847215aed3 361 Pfam PF00565 Staphylococcal nuclease homologue 289 359 5.6E-8 T 11-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 SYN_00847 09fe7fdbe2de766b6fc5e84e2e3c9c1c 156 Pfam PF03061 Thioesterase superfamily 55 133 5.2E-7 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 SYN_00847 09fe7fdbe2de766b6fc5e84e2e3c9c1c 156 SUPERFAMILY SSF54637 5 147 8.33E-29 T 11-10-2018 IPR029069 HotDog domain superfamily SYN_00847 09fe7fdbe2de766b6fc5e84e2e3c9c1c 156 Gene3D G3DSA:3.10.129.10 1 155 3.2E-43 T 11-10-2018 SYN_01629 6e1c8e70eadbaa18c516b70bbddd5aec 777 SUPERFAMILY SSF51905 387 673 1.9E-47 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_01629 6e1c8e70eadbaa18c516b70bbddd5aec 777 Pfam PF01493 GXGXG motif 57 203 1.0E-14 T 11-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 SYN_01629 6e1c8e70eadbaa18c516b70bbddd5aec 777 SUPERFAMILY SSF69336 20 258 3.4E-41 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 SYN_01629 6e1c8e70eadbaa18c516b70bbddd5aec 777 Gene3D G3DSA:3.50.50.60 583 676 2.4E-12 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_01629 6e1c8e70eadbaa18c516b70bbddd5aec 777 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 486 504 1.3E-20 T 11-10-2018 SYN_01629 6e1c8e70eadbaa18c516b70bbddd5aec 777 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 603 619 1.3E-20 T 11-10-2018 SYN_01629 6e1c8e70eadbaa18c516b70bbddd5aec 777 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 404 423 1.3E-20 T 11-10-2018 SYN_01629 6e1c8e70eadbaa18c516b70bbddd5aec 777 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 529 547 1.3E-20 T 11-10-2018 SYN_01629 6e1c8e70eadbaa18c516b70bbddd5aec 777 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 628 650 1.3E-20 T 11-10-2018 SYN_01629 6e1c8e70eadbaa18c516b70bbddd5aec 777 Gene3D G3DSA:3.30.70.20 711 768 1.6E-9 T 11-10-2018 SYN_01629 6e1c8e70eadbaa18c516b70bbddd5aec 777 Gene3D G3DSA:2.160.20.60 23 257 3.5E-17 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 SYN_01629 6e1c8e70eadbaa18c516b70bbddd5aec 777 Gene3D G3DSA:3.50.50.60 525 582 4.6E-5 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_01629 6e1c8e70eadbaa18c516b70bbddd5aec 777 Gene3D G3DSA:3.50.50.60 401 524 2.6E-21 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_01629 6e1c8e70eadbaa18c516b70bbddd5aec 777 Pfam PF12838 4Fe-4S dicluster domain 718 767 1.7E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_01629 6e1c8e70eadbaa18c516b70bbddd5aec 777 SUPERFAMILY SSF54862 317 772 5.86E-15 T 11-10-2018 SYN_01629 6e1c8e70eadbaa18c516b70bbddd5aec 777 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 315 385 1.9E-8 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 SYN_01629 6e1c8e70eadbaa18c516b70bbddd5aec 777 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 403 425 1.0E-6 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SYN_01629 6e1c8e70eadbaa18c516b70bbddd5aec 777 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 638 656 1.0E-6 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SYN_01629 6e1c8e70eadbaa18c516b70bbddd5aec 777 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 525 549 1.0E-6 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SYN_01629 6e1c8e70eadbaa18c516b70bbddd5aec 777 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 753 764 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_01629 6e1c8e70eadbaa18c516b70bbddd5aec 777 Gene3D G3DSA:1.10.1060.10 309 400 1.3E-12 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SYN_01629 6e1c8e70eadbaa18c516b70bbddd5aec 777 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 403 662 5.3E-33 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SYN_00547 71c571ede0e84c20cb31956b8c69e207 181 PRINTS PR00125 ATP synthase delta subunit signature 76 87 8.8E-25 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00547 71c571ede0e84c20cb31956b8c69e207 181 PRINTS PR00125 ATP synthase delta subunit signature 152 170 8.8E-25 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00547 71c571ede0e84c20cb31956b8c69e207 181 PRINTS PR00125 ATP synthase delta subunit signature 87 101 8.8E-25 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00547 71c571ede0e84c20cb31956b8c69e207 181 PRINTS PR00125 ATP synthase delta subunit signature 6 25 8.8E-25 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00547 71c571ede0e84c20cb31956b8c69e207 181 PRINTS PR00125 ATP synthase delta subunit signature 137 152 8.8E-25 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00547 71c571ede0e84c20cb31956b8c69e207 181 Hamap MF_01416 ATP synthase subunit delta [atpD]. 2 179 19.998 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00547 71c571ede0e84c20cb31956b8c69e207 181 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 6 177 5.3E-38 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00547 71c571ede0e84c20cb31956b8c69e207 181 Pfam PF00213 ATP synthase delta (OSCP) subunit 6 176 3.9E-50 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00547 71c571ede0e84c20cb31956b8c69e207 181 Gene3D G3DSA:1.10.520.20 5 99 1.6E-17 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00547 71c571ede0e84c20cb31956b8c69e207 181 SUPERFAMILY SSF47928 3 105 1.05E-24 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_01284 06a5342efbef145c074d10e305e1de66 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 163 191 9.7E-15 T 11-10-2018 IPR003004 GspF/PilC family SYN_01284 06a5342efbef145c074d10e305e1de66 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 382 401 9.7E-15 T 11-10-2018 IPR003004 GspF/PilC family SYN_01284 06a5342efbef145c074d10e305e1de66 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 366 380 9.7E-15 T 11-10-2018 IPR003004 GspF/PilC family SYN_01284 06a5342efbef145c074d10e305e1de66 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 64 76 9.7E-15 T 11-10-2018 IPR003004 GspF/PilC family SYN_01284 06a5342efbef145c074d10e305e1de66 403 Gene3D G3DSA:1.20.81.30 55 170 4.4E-32 T 11-10-2018 SYN_01284 06a5342efbef145c074d10e305e1de66 403 Gene3D G3DSA:1.20.81.30 254 366 1.0E-31 T 11-10-2018 SYN_01284 06a5342efbef145c074d10e305e1de66 403 Pfam PF00482 Type II secretion system (T2SS), protein F 271 393 1.0E-30 T 11-10-2018 IPR018076 Type II secretion system F domain SYN_01284 06a5342efbef145c074d10e305e1de66 403 Pfam PF00482 Type II secretion system (T2SS), protein F 68 191 1.5E-29 T 11-10-2018 IPR018076 Type II secretion system F domain SYN_01284 06a5342efbef145c074d10e305e1de66 403 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 163 191 - T 11-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 SYN_01849 67bdd847ca1c7133c8876e82c8c864c8 696 Gene3D G3DSA:3.40.50.300 21 282 1.7E-46 T 11-10-2018 SYN_01849 67bdd847ca1c7133c8876e82c8c864c8 696 Gene3D G3DSA:3.40.50.300 292 654 2.4E-37 T 11-10-2018 SYN_01849 67bdd847ca1c7133c8876e82c8c864c8 696 Pfam PF13245 AAA domain 31 266 6.8E-23 T 11-10-2018 SYN_01849 67bdd847ca1c7133c8876e82c8c864c8 696 SUPERFAMILY SSF52540 21 645 1.01E-80 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01849 67bdd847ca1c7133c8876e82c8c864c8 696 Gene3D G3DSA:1.10.486.10 400 565 2.4E-37 T 11-10-2018 SYN_01849 67bdd847ca1c7133c8876e82c8c864c8 696 Gene3D G3DSA:1.10.10.160 127 196 1.7E-46 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily SYN_01849 67bdd847ca1c7133c8876e82c8c864c8 696 Pfam PF13361 UvrD-like helicase C-terminal domain 558 633 4.8E-14 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SYN_02618 bb8e2f1c9451b37ccf2929bb88c3ce1b 448 Gene3D G3DSA:3.30.70.1450 366 448 3.7E-17 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 SYN_02618 bb8e2f1c9451b37ccf2929bb88c3ce1b 448 SUPERFAMILY SSF51735 231 372 2.89E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_02618 bb8e2f1c9451b37ccf2929bb88c3ce1b 448 SUPERFAMILY SSF116726 371 443 7.72E-10 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 SYN_02618 bb8e2f1c9451b37ccf2929bb88c3ce1b 448 Gene3D G3DSA:3.40.50.720 2 137 1.1E-42 T 11-10-2018 SYN_02618 bb8e2f1c9451b37ccf2929bb88c3ce1b 448 Pfam PF02254 TrkA-N domain 3 103 5.0E-22 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SYN_02618 bb8e2f1c9451b37ccf2929bb88c3ce1b 448 Pfam PF02254 TrkA-N domain 233 349 9.0E-25 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SYN_02618 bb8e2f1c9451b37ccf2929bb88c3ce1b 448 SUPERFAMILY SSF116726 137 222 1.44E-13 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 SYN_02618 bb8e2f1c9451b37ccf2929bb88c3ce1b 448 Pfam PF02080 TrkA-C domain 380 446 7.4E-9 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SYN_02618 bb8e2f1c9451b37ccf2929bb88c3ce1b 448 Pfam PF02080 TrkA-C domain 156 219 1.4E-9 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SYN_02618 bb8e2f1c9451b37ccf2929bb88c3ce1b 448 Gene3D G3DSA:3.30.70.1450 139 228 1.1E-16 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 SYN_02618 bb8e2f1c9451b37ccf2929bb88c3ce1b 448 Gene3D G3DSA:3.40.50.720 231 365 5.2E-36 T 11-10-2018 SYN_02618 bb8e2f1c9451b37ccf2929bb88c3ce1b 448 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 5.8E-13 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SYN_02618 bb8e2f1c9451b37ccf2929bb88c3ce1b 448 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 5.8E-13 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SYN_02618 bb8e2f1c9451b37ccf2929bb88c3ce1b 448 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 5.8E-13 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SYN_02618 bb8e2f1c9451b37ccf2929bb88c3ce1b 448 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 5.8E-13 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SYN_02618 bb8e2f1c9451b37ccf2929bb88c3ce1b 448 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 5.8E-13 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SYN_02618 bb8e2f1c9451b37ccf2929bb88c3ce1b 448 SUPERFAMILY SSF51735 1 150 2.91E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_02892 b9309cde6316d2f17a53965901f3df8f 270 SUPERFAMILY SSF56281 3 256 9.6E-30 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_02892 b9309cde6316d2f17a53965901f3df8f 270 SMART SM00849 10 250 4.4E-15 T 11-10-2018 IPR001279 Metallo-beta-lactamase SYN_02892 b9309cde6316d2f17a53965901f3df8f 270 Pfam PF00753 Metallo-beta-lactamase superfamily 8 212 8.2E-12 T 11-10-2018 IPR001279 Metallo-beta-lactamase SYN_00721 3c7677b4a4eb6b3096d5de3e495a67dc 234 SUPERFAMILY SSF81342 10 229 1.26E-33 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 SYN_00721 3c7677b4a4eb6b3096d5de3e495a67dc 234 Gene3D G3DSA:1.20.950.20 6 233 5.2E-41 T 11-10-2018 SYN_00721 3c7677b4a4eb6b3096d5de3e495a67dc 234 Pfam PF01292 Prokaryotic cytochrome b561 14 203 1.2E-18 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SYN_00166 dd2fa358608ecaea982aab9e0c7473bd 541 SMART SM00849 19 254 2.4E-18 T 11-10-2018 IPR001279 Metallo-beta-lactamase SYN_00166 dd2fa358608ecaea982aab9e0c7473bd 541 Gene3D G3DSA:3.40.50.10890 227 411 3.5E-144 T 11-10-2018 SYN_00166 dd2fa358608ecaea982aab9e0c7473bd 541 Gene3D G3DSA:3.60.15.10 12 446 3.5E-144 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_00166 dd2fa358608ecaea982aab9e0c7473bd 541 SMART SM01027 259 385 3.4E-62 T 11-10-2018 IPR022712 Beta-Casp domain SYN_00166 dd2fa358608ecaea982aab9e0c7473bd 541 Pfam PF16661 Metallo-beta-lactamase superfamily domain 24 177 6.1E-13 T 11-10-2018 IPR001279 Metallo-beta-lactamase SYN_00166 dd2fa358608ecaea982aab9e0c7473bd 541 Pfam PF10996 Beta-Casp domain 259 385 6.9E-28 T 11-10-2018 IPR022712 Beta-Casp domain SYN_00166 dd2fa358608ecaea982aab9e0c7473bd 541 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 399 462 1.1E-17 T 11-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain SYN_00166 dd2fa358608ecaea982aab9e0c7473bd 541 SUPERFAMILY SSF56281 7 468 2.23E-134 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_00101 4096c4f1480b48088d69876145be899b 155 PIRSF PIRSF005859 1 154 9.8E-48 T 11-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 SYN_00101 4096c4f1480b48088d69876145be899b 155 Pfam PF03073 TspO/MBR family 14 150 3.1E-44 T 11-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 SYN_00101 4096c4f1480b48088d69876145be899b 155 Gene3D G3DSA:1.20.1260.100 2 155 1.5E-51 T 11-10-2018 IPR038330 TspO/MBR-related superfamily SYN_01263 d7f0bda86102ee82900f50af8d100b31 413 SUPERFAMILY SSF52540 4 231 1.82E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01263 d7f0bda86102ee82900f50af8d100b31 413 SMART SM00382 30 227 1.1E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01263 d7f0bda86102ee82900f50af8d100b31 413 Pfam PF00005 ABC transporter 21 170 1.4E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_01263 d7f0bda86102ee82900f50af8d100b31 413 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_01263 d7f0bda86102ee82900f50af8d100b31 413 Gene3D G3DSA:3.40.50.300 2 243 3.2E-65 T 11-10-2018 SYN_01263 d7f0bda86102ee82900f50af8d100b31 413 SMART SM00267 237 412 0.0073 T 11-10-2018 IPR000160 GGDEF domain SYN_01263 d7f0bda86102ee82900f50af8d100b31 413 SUPERFAMILY SSF55073 251 359 2.59E-6 T 11-10-2018 IPR029787 Nucleotide cyclase SYN_01263 d7f0bda86102ee82900f50af8d100b31 413 Gene3D G3DSA:3.30.70.270 248 411 4.0E-9 T 11-10-2018 SYN_01645 46e55c5992424ba90ad1f73d9f806a68 943 Pfam PF00037 4Fe-4S binding domain 21 39 3.9E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_01645 46e55c5992424ba90ad1f73d9f806a68 943 Gene3D G3DSA:3.30.70.3270 11 115 8.3E-8 T 11-10-2018 SYN_01645 46e55c5992424ba90ad1f73d9f806a68 943 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 72 341 1.6E-12 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SYN_01645 46e55c5992424ba90ad1f73d9f806a68 943 Gene3D G3DSA:3.30.70.20 830 932 5.4E-13 T 11-10-2018 SYN_01645 46e55c5992424ba90ad1f73d9f806a68 943 Pfam PF00890 FAD binding domain 514 550 2.3E-8 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SYN_01645 46e55c5992424ba90ad1f73d9f806a68 943 SUPERFAMILY SSF54862 661 921 2.26E-19 T 11-10-2018 SYN_01645 46e55c5992424ba90ad1f73d9f806a68 943 Gene3D G3DSA:3.50.50.60 224 279 2.5E-5 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_01645 46e55c5992424ba90ad1f73d9f806a68 943 SUPERFAMILY SSF54862 9 148 4.02E-15 T 11-10-2018 SYN_01645 46e55c5992424ba90ad1f73d9f806a68 943 Pfam PF12838 4Fe-4S dicluster domain 863 911 2.0E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_01645 46e55c5992424ba90ad1f73d9f806a68 943 Gene3D G3DSA:3.50.50.60 512 727 8.4E-21 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_01645 46e55c5992424ba90ad1f73d9f806a68 943 Gene3D G3DSA:3.50.50.60 280 342 2.5E-5 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_01645 46e55c5992424ba90ad1f73d9f806a68 943 SUPERFAMILY SSF51905 82 348 7.12E-12 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_01645 46e55c5992424ba90ad1f73d9f806a68 943 SUPERFAMILY SSF51905 514 839 1.11E-23 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_01645 46e55c5992424ba90ad1f73d9f806a68 943 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 27 38 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_01492 508498af625a2f9ffe1efc229d41c6f7 503 Pfam PF13629 Pilus formation protein N terminal region 44 113 5.2E-21 T 11-10-2018 IPR032789 Pilus formation protein, N-terminal SYN_01492 508498af625a2f9ffe1efc229d41c6f7 503 PRINTS PR00811 Bacterial general secretion pathway protein D signature 276 300 2.5E-17 T 11-10-2018 IPR001775 GspD/PilQ family SYN_01492 508498af625a2f9ffe1efc229d41c6f7 503 PRINTS PR00811 Bacterial general secretion pathway protein D signature 427 441 2.5E-17 T 11-10-2018 IPR001775 GspD/PilQ family SYN_01492 508498af625a2f9ffe1efc229d41c6f7 503 PRINTS PR00811 Bacterial general secretion pathway protein D signature 187 197 2.5E-17 T 11-10-2018 IPR001775 GspD/PilQ family SYN_01492 508498af625a2f9ffe1efc229d41c6f7 503 PRINTS PR00811 Bacterial general secretion pathway protein D signature 404 422 2.5E-17 T 11-10-2018 IPR001775 GspD/PilQ family SYN_01492 508498af625a2f9ffe1efc229d41c6f7 503 Pfam PF00263 Bacterial type II and III secretion system protein 280 440 2.6E-48 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 SYN_02023 48fc953afdc73d4eb3b526b0b134a5ca 386 Gene3D G3DSA:2.30.42.10 282 386 2.7E-25 T 11-10-2018 SYN_02023 48fc953afdc73d4eb3b526b0b134a5ca 386 Pfam PF13365 Trypsin-like peptidase domain 106 243 3.2E-34 T 11-10-2018 SYN_02023 48fc953afdc73d4eb3b526b0b134a5ca 386 Gene3D G3DSA:2.40.10.10 55 166 1.3E-33 T 11-10-2018 SYN_02023 48fc953afdc73d4eb3b526b0b134a5ca 386 Gene3D G3DSA:2.40.10.10 169 281 5.5E-42 T 11-10-2018 SYN_02023 48fc953afdc73d4eb3b526b0b134a5ca 386 SMART SM00228 288 373 1.8E-11 T 11-10-2018 IPR001478 PDZ domain GO:0005515 SYN_02023 48fc953afdc73d4eb3b526b0b134a5ca 386 SUPERFAMILY SSF50494 71 278 3.95E-60 T 11-10-2018 IPR009003 Peptidase S1, PA clan SYN_02023 48fc953afdc73d4eb3b526b0b134a5ca 386 Pfam PF13180 PDZ domain 302 382 4.1E-13 T 11-10-2018 IPR001478 PDZ domain GO:0005515 SYN_02023 48fc953afdc73d4eb3b526b0b134a5ca 386 PRINTS PR00834 HtrA/DegQ protease family signature 178 202 2.1E-46 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SYN_02023 48fc953afdc73d4eb3b526b0b134a5ca 386 PRINTS PR00834 HtrA/DegQ protease family signature 236 253 2.1E-46 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SYN_02023 48fc953afdc73d4eb3b526b0b134a5ca 386 PRINTS PR00834 HtrA/DegQ protease family signature 136 156 2.1E-46 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SYN_02023 48fc953afdc73d4eb3b526b0b134a5ca 386 PRINTS PR00834 HtrA/DegQ protease family signature 115 127 2.1E-46 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SYN_02023 48fc953afdc73d4eb3b526b0b134a5ca 386 PRINTS PR00834 HtrA/DegQ protease family signature 214 231 2.1E-46 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SYN_02023 48fc953afdc73d4eb3b526b0b134a5ca 386 PRINTS PR00834 HtrA/DegQ protease family signature 331 343 2.1E-46 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SYN_02023 48fc953afdc73d4eb3b526b0b134a5ca 386 SUPERFAMILY SSF50156 254 383 1.03E-16 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 SYN_00717 3c54e0d439f72cd6a65d6795070dda6e 125 SUPERFAMILY SSF46785 23 119 1.52E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_00717 3c54e0d439f72cd6a65d6795070dda6e 125 Pfam PF01638 HxlR-like helix-turn-helix 34 115 9.4E-12 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type SYN_00717 3c54e0d439f72cd6a65d6795070dda6e 125 Gene3D G3DSA:1.10.10.10 20 123 2.5E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_02413 61250232575523a8ef2d6936f86b9d56 100 TIGRFAM TIGR04114 tSAM_targ_Cxxx: modification target Cys-rich repeat 74 91 1.0E-4 T 11-10-2018 IPR026393 Modification target Cys-rich repeat SYN_02413 61250232575523a8ef2d6936f86b9d56 100 TIGRFAM TIGR04117 Syntroph_Cxxx: Cys-Xaa-Xaa-Xaa repeat radical SAM target protein 1 96 1.2E-46 T 11-10-2018 IPR026484 Cys-Xaa-Xaa-Xaa repeat radical SAM target protein SYN_01225 f7c48a1939bd4e1a5572360c9afec63c 252 SUPERFAMILY SSF55124 41 108 9.32E-18 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 SYN_01225 f7c48a1939bd4e1a5572360c9afec63c 252 SUPERFAMILY SSF56014 119 251 4.84E-43 T 11-10-2018 SYN_01225 f7c48a1939bd4e1a5572360c9afec63c 252 PRINTS PR00397 Sirohaem Fe-binding site signature 121 139 1.3E-7 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 SYN_01225 f7c48a1939bd4e1a5572360c9afec63c 252 PRINTS PR00397 Sirohaem Fe-binding site signature 164 182 1.3E-7 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 SYN_01225 f7c48a1939bd4e1a5572360c9afec63c 252 Gene3D G3DSA:3.90.480.20 17 112 3.2E-8 T 11-10-2018 SYN_01225 f7c48a1939bd4e1a5572360c9afec63c 252 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 250 1.3E-27 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 SYN_01225 f7c48a1939bd4e1a5572360c9afec63c 252 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 45 108 5.5E-14 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 SYN_01225 f7c48a1939bd4e1a5572360c9afec63c 252 PIRSF PIRSF037487 34 252 5.1E-111 T 11-10-2018 IPR017220 Sulphite reductase, assimilatory SYN_01225 f7c48a1939bd4e1a5572360c9afec63c 252 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 164 180 - T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 SYN_01225 f7c48a1939bd4e1a5572360c9afec63c 252 Gene3D G3DSA:3.30.413.10 116 251 3.0E-39 T 11-10-2018 SYN_03862 f5000b9a96596521173d78bffba31d8b 61 Gene3D G3DSA:3.50.50.60 1 60 5.7E-12 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_03862 f5000b9a96596521173d78bffba31d8b 61 Pfam PF12831 FAD dependent oxidoreductase 10 48 1.2E-9 T 11-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal SYN_03862 f5000b9a96596521173d78bffba31d8b 61 SUPERFAMILY SSF51971 10 58 3.41E-12 T 11-10-2018 SYN_03861 f5000b9a96596521173d78bffba31d8b 61 Gene3D G3DSA:3.50.50.60 1 60 5.7E-12 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_03861 f5000b9a96596521173d78bffba31d8b 61 Pfam PF12831 FAD dependent oxidoreductase 10 48 1.2E-9 T 11-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal SYN_03861 f5000b9a96596521173d78bffba31d8b 61 SUPERFAMILY SSF51971 10 58 3.41E-12 T 11-10-2018 SYN_01572 8a4cea9321eb7cbe029b158ba3254e25 443 SUPERFAMILY SSF51338 5 436 1.15E-34 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 SYN_01572 8a4cea9321eb7cbe029b158ba3254e25 443 Gene3D G3DSA:2.30.40.10 7 427 6.3E-161 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 SYN_01572 8a4cea9321eb7cbe029b158ba3254e25 443 Hamap MF_01281 5'-deoxyadenosine deaminase [dadD]. 5 436 44.968 T 11-10-2018 IPR023512 Deaminase MtaD/DadD GO:0019239 SYN_01572 8a4cea9321eb7cbe029b158ba3254e25 443 Gene3D G3DSA:3.20.20.140 64 354 6.3E-161 T 11-10-2018 SYN_01572 8a4cea9321eb7cbe029b158ba3254e25 443 Pfam PF01979 Amidohydrolase family 61 410 1.1E-68 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 SYN_01572 8a4cea9321eb7cbe029b158ba3254e25 443 SUPERFAMILY SSF51556 63 361 4.4E-97 T 11-10-2018 IPR032466 Metal-dependent hydrolase SYN_01803 e43c31d3b85472f5e760bfc00f6c15d0 189 PRINTS PR01576 Peptide deformylase signature 122 140 5.3E-22 T 11-10-2018 IPR023635 Peptide deformylase SYN_01803 e43c31d3b85472f5e760bfc00f6c15d0 189 PRINTS PR01576 Peptide deformylase signature 45 74 5.3E-22 T 11-10-2018 IPR023635 Peptide deformylase SYN_01803 e43c31d3b85472f5e760bfc00f6c15d0 189 PRINTS PR01576 Peptide deformylase signature 141 170 5.3E-22 T 11-10-2018 IPR023635 Peptide deformylase SYN_01803 e43c31d3b85472f5e760bfc00f6c15d0 189 PRINTS PR01576 Peptide deformylase signature 110 121 5.3E-22 T 11-10-2018 IPR023635 Peptide deformylase SYN_01803 e43c31d3b85472f5e760bfc00f6c15d0 189 SUPERFAMILY SSF56420 21 182 1.03E-38 T 11-10-2018 IPR036821 Peptide deformylase superfamily SYN_01803 e43c31d3b85472f5e760bfc00f6c15d0 189 Pfam PF01327 Polypeptide deformylase 20 167 2.0E-42 T 11-10-2018 IPR023635 Peptide deformylase SYN_01803 e43c31d3b85472f5e760bfc00f6c15d0 189 Gene3D G3DSA:3.90.45.10 5 180 8.6E-41 T 11-10-2018 IPR036821 Peptide deformylase superfamily SYN_01803 e43c31d3b85472f5e760bfc00f6c15d0 189 Hamap MF_00163 Peptide deformylase [def]. 9 183 22.31 T 11-10-2018 IPR023635 Peptide deformylase SYN_01803 e43c31d3b85472f5e760bfc00f6c15d0 189 PIRSF PIRSF004749 4 183 5.8E-40 T 11-10-2018 IPR023635 Peptide deformylase SYN_01803 e43c31d3b85472f5e760bfc00f6c15d0 189 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 36 172 3.9E-31 T 11-10-2018 IPR023635 Peptide deformylase SYN_02811 1087951f4f6112650d70d6f353b2718b 403 Pfam PF00700 Bacterial flagellin C-terminal helical region 320 402 2.0E-7 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SYN_02811 1087951f4f6112650d70d6f353b2718b 403 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 6 162 6.2E-44 T 11-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 SYN_02811 1087951f4f6112650d70d6f353b2718b 403 Gene3D G3DSA:1.20.1330.10 266 374 2.9E-10 T 11-10-2018 SYN_02811 1087951f4f6112650d70d6f353b2718b 403 SUPERFAMILY SSF64518 3 403 1.83E-58 T 11-10-2018 SYN_02811 1087951f4f6112650d70d6f353b2718b 403 Gene3D G3DSA:1.20.1330.10 44 199 7.2E-35 T 11-10-2018 SYN_02811 1087951f4f6112650d70d6f353b2718b 403 Pfam PF00669 Bacterial flagellin N-terminal helical region 9 144 6.4E-15 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SYN_02657 c67408a8dc7a3b50f43dbdb2fd03e1bc 317 Pfam PF05598 Transposase domain (DUF772) 26 99 2.9E-22 T 11-10-2018 IPR008490 Transposase InsH, N-terminal SYN_02657 c67408a8dc7a3b50f43dbdb2fd03e1bc 317 Pfam PF01609 Transposase DDE domain 112 279 1.8E-19 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 SYN_01146 b58f30003854785a02273e8591011b0f 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 219 5.2E-25 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 SYN_01146 b58f30003854785a02273e8591011b0f 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 119 5.6E-24 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 SYN_01146 b58f30003854785a02273e8591011b0f 381 SUPERFAMILY SSF47203 230 379 6.93E-45 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 SYN_01146 b58f30003854785a02273e8591011b0f 381 SUPERFAMILY SSF56645 1 242 1.7E-72 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 SYN_01146 b58f30003854785a02273e8591011b0f 381 Gene3D G3DSA:2.40.110.10 123 235 1.6E-39 T 11-10-2018 SYN_01146 b58f30003854785a02273e8591011b0f 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 377 9.5E-43 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SYN_01146 b58f30003854785a02273e8591011b0f 381 Gene3D G3DSA:1.20.140.10 236 380 6.6E-47 T 11-10-2018 SYN_01146 b58f30003854785a02273e8591011b0f 381 Gene3D G3DSA:1.10.540.10 1 121 2.0E-30 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 SYN_01146 b58f30003854785a02273e8591011b0f 381 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 126 138 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 SYN_02473 356207bb2743e50e0164824cf8d53202 343 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 2 328 27.378 T 11-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 SYN_02473 356207bb2743e50e0164824cf8d53202 343 Pfam PF01867 CRISPR associated protein Cas1 8 298 9.2E-105 T 11-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 SYN_02473 356207bb2743e50e0164824cf8d53202 343 Gene3D G3DSA:3.100.10.20 6 84 4.2E-20 T 11-10-2018 SYN_02473 356207bb2743e50e0164824cf8d53202 343 Gene3D G3DSA:1.20.120.920 86 343 2.8E-76 T 11-10-2018 SYN_02473 356207bb2743e50e0164824cf8d53202 343 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 7 335 1.8E-81 T 11-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 SYN_02473 356207bb2743e50e0164824cf8d53202 343 TIGRFAM TIGR03640 cas1_DVULG: CRISPR-associated endonuclease Cas1, subtype I-C/DVULG 3 341 1.1E-162 T 11-10-2018 IPR019856 CRISPR-associated protein Cas1, DVULG subtype GO:0004520|GO:0043571|GO:0046872 SYN_00608 b7ea50110c66959cffcb13e5de85bdc2 592 Gene3D G3DSA:3.40.190.10 100 565 1.7E-165 T 11-10-2018 SYN_00608 b7ea50110c66959cffcb13e5de85bdc2 592 SUPERFAMILY SSF53850 85 581 2.72E-148 T 11-10-2018 SYN_00608 b7ea50110c66959cffcb13e5de85bdc2 592 Gene3D G3DSA:3.90.76.10 120 234 1.7E-165 T 11-10-2018 SYN_00608 b7ea50110c66959cffcb13e5de85bdc2 592 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 131 494 6.5E-101 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain SYN_00608 b7ea50110c66959cffcb13e5de85bdc2 592 Gene3D G3DSA:3.10.105.10 330 551 1.7E-165 T 11-10-2018 SYN_00608 b7ea50110c66959cffcb13e5de85bdc2 592 PIRSF PIRSF002741 47 585 6.1E-212 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 SYN_01978 0f931d1d4cfa784d2a1de8f101a2c1bf 561 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_01978 0f931d1d4cfa784d2a1de8f101a2c1bf 561 Gene3D G3DSA:3.40.50.300 7 290 3.2E-76 T 11-10-2018 SYN_01978 0f931d1d4cfa784d2a1de8f101a2c1bf 561 SUPERFAMILY SSF52540 315 535 4.81E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01978 0f931d1d4cfa784d2a1de8f101a2c1bf 561 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 7 558 1.1E-292 T 11-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 SYN_01978 0f931d1d4cfa784d2a1de8f101a2c1bf 561 Pfam PF00005 ABC transporter 25 196 5.7E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_01978 0f931d1d4cfa784d2a1de8f101a2c1bf 561 Pfam PF12848 ABC transporter 235 302 6.6E-11 T 11-10-2018 IPR032781 ABC-transporter extension domain SYN_01978 0f931d1d4cfa784d2a1de8f101a2c1bf 561 SUPERFAMILY SSF52540 12 247 1.93E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01978 0f931d1d4cfa784d2a1de8f101a2c1bf 561 Pfam PF00005 ABC transporter 345 478 3.2E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_01978 0f931d1d4cfa784d2a1de8f101a2c1bf 561 Gene3D G3DSA:3.40.50.300 292 560 3.2E-73 T 11-10-2018 SYN_01978 0f931d1d4cfa784d2a1de8f101a2c1bf 561 SMART SM00382 353 531 3.2E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01978 0f931d1d4cfa784d2a1de8f101a2c1bf 561 SMART SM00382 34 241 4.1E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_03246 d8f7e4fb14957a15b73e46501b621326 121 Gene3D G3DSA:3.10.129.10 10 119 1.3E-10 T 11-10-2018 SYN_03246 d8f7e4fb14957a15b73e46501b621326 121 SUPERFAMILY SSF54637 25 84 3.4E-9 T 11-10-2018 IPR029069 HotDog domain superfamily SYN_03246 d8f7e4fb14957a15b73e46501b621326 121 Pfam PF07977 FabA-like domain 30 62 2.6E-5 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 SYN_02007 01e64eedfa12978c234306526cab8d25 179 SUPERFAMILY SSF55021 93 173 1.46E-13 T 11-10-2018 SYN_02007 01e64eedfa12978c234306526cab8d25 179 Pfam PF13740 ACT domain 4 77 7.0E-11 T 11-10-2018 SYN_02007 01e64eedfa12978c234306526cab8d25 179 Gene3D G3DSA:3.30.70.260 1 84 4.1E-19 T 11-10-2018 SYN_02007 01e64eedfa12978c234306526cab8d25 179 Gene3D G3DSA:3.30.70.260 91 177 1.9E-18 T 11-10-2018 SYN_02007 01e64eedfa12978c234306526cab8d25 179 PIRSF PIRSF028103 1 177 3.2E-29 T 11-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 SYN_02007 01e64eedfa12978c234306526cab8d25 179 SUPERFAMILY SSF55021 2 80 2.87E-13 T 11-10-2018 SYN_02836 639e3e73922f0c1653863d6ac2a285bc 163 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 81 154 1.2E-32 T 11-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 SYN_02836 639e3e73922f0c1653863d6ac2a285bc 163 Gene3D G3DSA:2.30.330.10 73 163 1.4E-34 T 11-10-2018 IPR036429 SpoA-like superfamily SYN_02836 639e3e73922f0c1653863d6ac2a285bc 163 SUPERFAMILY SSF101801 81 161 7.32E-24 T 11-10-2018 IPR036429 SpoA-like superfamily SYN_02836 639e3e73922f0c1653863d6ac2a285bc 163 PRINTS PR00956 Flagellar motor switch protein FliN signature 129 144 1.3E-26 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SYN_02836 639e3e73922f0c1653863d6ac2a285bc 163 PRINTS PR00956 Flagellar motor switch protein FliN signature 100 116 1.3E-26 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SYN_02836 639e3e73922f0c1653863d6ac2a285bc 163 PRINTS PR00956 Flagellar motor switch protein FliN signature 83 99 1.3E-26 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SYN_02836 639e3e73922f0c1653863d6ac2a285bc 163 PRINTS PR00956 Flagellar motor switch protein FliN signature 116 129 1.3E-26 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 SYN_02836 639e3e73922f0c1653863d6ac2a285bc 163 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 84 153 8.6E-25 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) SYN_00310 375bbc29059f8b3280d9754c246b669e 367 Gene3D G3DSA:1.20.120.420 2 158 9.6E-38 T 11-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 SYN_00310 375bbc29059f8b3280d9754c246b669e 367 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 7 351 1.1E-130 T 11-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 SYN_00310 375bbc29059f8b3280d9754c246b669e 367 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 32 351 4.0E-114 T 11-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 SYN_00310 375bbc29059f8b3280d9754c246b669e 367 Gene3D G3DSA:3.40.50.10470 159 360 5.3E-71 T 11-10-2018 SYN_00310 375bbc29059f8b3280d9754c246b669e 367 Pfam PF01008 Initiation factor 2 subunit family 47 351 2.0E-81 T 11-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 SYN_00310 375bbc29059f8b3280d9754c246b669e 367 SUPERFAMILY SSF100950 5 359 2.79E-118 T 11-10-2018 IPR037171 NagB/RpiA transferase-like SYN_00310 375bbc29059f8b3280d9754c246b669e 367 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 4 363 41.248 T 11-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 SYN_00308 e681e54a786ea6b382be5257c52cda82 485 Pfam PF01425 Amidase 25 466 2.0E-160 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SYN_00308 e681e54a786ea6b382be5257c52cda82 485 Gene3D G3DSA:3.90.1300.10 2 484 6.2E-199 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SYN_00308 e681e54a786ea6b382be5257c52cda82 485 SUPERFAMILY SSF75304 1 483 2.88E-171 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SYN_00308 e681e54a786ea6b382be5257c52cda82 485 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 477 92.979 T 11-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SYN_00308 e681e54a786ea6b382be5257c52cda82 485 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 12 475 5.5E-191 T 11-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SYN_00308 e681e54a786ea6b382be5257c52cda82 485 ProSitePatterns PS00571 Amidases signature. 151 182 - T 11-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 SYN_02601 eee5610d64e530d4d3107348315ce9d5 87 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 7 86 8.2E-26 T 11-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 SYN_02601 eee5610d64e530d4d3107348315ce9d5 87 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 24 86 7.3E-8 T 11-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 SYN_02601 eee5610d64e530d4d3107348315ce9d5 87 SUPERFAMILY SSF143011 2 87 4.58E-19 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily SYN_02601 eee5610d64e530d4d3107348315ce9d5 87 Gene3D G3DSA:3.30.2310.20 1 86 9.1E-12 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily SYN_02029 c5020f59ed9821e7809a44cfbc047924 195 SUPERFAMILY SSF55144 7 193 1.6E-43 T 11-10-2018 IPR009097 Cyclic phosphodiesterase SYN_02029 c5020f59ed9821e7809a44cfbc047924 195 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 7 191 25.7 T 11-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 SYN_02029 c5020f59ed9821e7809a44cfbc047924 195 Gene3D G3DSA:3.90.1140.10 7 192 7.2E-56 T 11-10-2018 SYN_02029 c5020f59ed9821e7809a44cfbc047924 195 Pfam PF02834 LigT like Phosphoesterase 107 183 1.8E-10 T 11-10-2018 IPR014051 Phosphoesterase, HXTX SYN_02029 c5020f59ed9821e7809a44cfbc047924 195 Pfam PF02834 LigT like Phosphoesterase 13 98 3.2E-17 T 11-10-2018 IPR014051 Phosphoesterase, HXTX SYN_02029 c5020f59ed9821e7809a44cfbc047924 195 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 7 189 6.0E-44 T 11-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 SYN_02891 52f56cb63f77f1d744007c2dadf82add 927 Gene3D G3DSA:2.60.40.10 327 416 5.1E-19 T 11-10-2018 IPR013783 Immunoglobulin-like fold SYN_02891 52f56cb63f77f1d744007c2dadf82add 927 SUPERFAMILY SSF49265 322 410 2.29E-7 T 11-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 SYN_02891 52f56cb63f77f1d744007c2dadf82add 927 Pfam PF13229 Right handed beta helix region 515 632 5.2E-12 T 11-10-2018 IPR039448 Right handed beta helix domain SYN_02891 52f56cb63f77f1d744007c2dadf82add 927 Pfam PF05643 Putative bacterial lipoprotein (DUF799) 53 195 3.0E-15 T 11-10-2018 IPR008517 Protein of unknown function DUF799 SYN_02891 52f56cb63f77f1d744007c2dadf82add 927 SUPERFAMILY SSF51126 474 633 6.48E-13 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor SYN_02891 52f56cb63f77f1d744007c2dadf82add 927 SMART SM00710 574 595 680.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat SYN_02891 52f56cb63f77f1d744007c2dadf82add 927 SMART SM00710 551 573 2200.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat SYN_02891 52f56cb63f77f1d744007c2dadf82add 927 SMART SM00710 528 549 5000.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat SYN_02891 52f56cb63f77f1d744007c2dadf82add 927 SMART SM00710 596 618 11.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat SYN_02891 52f56cb63f77f1d744007c2dadf82add 927 Gene3D G3DSA:2.160.20.10 504 643 2.9E-15 T 11-10-2018 IPR012334 Pectin lyase fold SYN_02891 52f56cb63f77f1d744007c2dadf82add 927 Gene3D G3DSA:3.40.50.10610 49 203 9.1E-29 T 11-10-2018 SYN_02979 b2c8e0c10692241f0b543f6502024083 521 SMART SM00322 209 276 1.6E-6 T 11-10-2018 IPR004087 K Homology domain GO:0003676 SYN_02979 b2c8e0c10692241f0b543f6502024083 521 Gene3D G3DSA:1.10.3210.10 326 496 5.0E-21 T 11-10-2018 SYN_02979 b2c8e0c10692241f0b543f6502024083 521 SUPERFAMILY SSF54791 209 305 2.46E-15 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 SYN_02979 b2c8e0c10692241f0b543f6502024083 521 Pfam PF00013 KH domain 214 265 2.3E-6 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 SYN_02979 b2c8e0c10692241f0b543f6502024083 521 Pfam PF12072 Domain of unknown function (DUF3552) 7 206 6.8E-62 T 11-10-2018 IPR022711 Ribonuclease Y, N-terminal SYN_02979 b2c8e0c10692241f0b543f6502024083 521 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 10 521 3.9E-233 T 11-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 SYN_02979 b2c8e0c10692241f0b543f6502024083 521 Hamap MF_00335 Ribonuclease Y [rny]. 6 521 24.715 T 11-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 SYN_02979 b2c8e0c10692241f0b543f6502024083 521 Gene3D G3DSA:3.30.1370.10 209 305 4.9E-7 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 SYN_02979 b2c8e0c10692241f0b543f6502024083 521 SUPERFAMILY SSF109604 316 471 1.76E-29 T 11-10-2018 SYN_02979 b2c8e0c10692241f0b543f6502024083 521 SMART SM00471 333 439 4.0E-12 T 11-10-2018 IPR003607 HD/PDEase domain SYN_02979 b2c8e0c10692241f0b543f6502024083 521 Pfam PF01966 HD domain 337 429 1.4E-15 T 11-10-2018 IPR006674 HD domain SYN_02979 b2c8e0c10692241f0b543f6502024083 521 TIGRFAM TIGR00277 HDIG: HDIG domain 333 409 4.9E-20 T 11-10-2018 IPR006675 HDIG domain SYN_02290 8451fb27b5b5baac4456a71b9b8f95a8 580 Pfam PF10145 Phage-related minor tail protein 101 296 2.4E-29 T 11-10-2018 IPR010090 Phage tail tape measure protein SYN_02290 8451fb27b5b5baac4456a71b9b8f95a8 580 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 58 375 9.9E-22 T 11-10-2018 IPR010090 Phage tail tape measure protein SYN_02339 08b2b02d67e9c997a0b48c098c1c6512 642 SMART SM00421 580 637 1.6E-7 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_02339 08b2b02d67e9c997a0b48c098c1c6512 642 SUPERFAMILY SSF55785 118 218 2.58E-20 T 11-10-2018 IPR035965 PAS domain superfamily SYN_02339 08b2b02d67e9c997a0b48c098c1c6512 642 Gene3D G3DSA:3.30.450.20 4 118 6.9E-14 T 11-10-2018 SYN_02339 08b2b02d67e9c997a0b48c098c1c6512 642 Pfam PF00196 Bacterial regulatory proteins, luxR family 582 630 1.0E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_02339 08b2b02d67e9c997a0b48c098c1c6512 642 Gene3D G3DSA:1.10.10.10 572 640 7.1E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_02339 08b2b02d67e9c997a0b48c098c1c6512 642 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 613 625 1.2E-5 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_02339 08b2b02d67e9c997a0b48c098c1c6512 642 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 583 597 1.2E-5 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_02339 08b2b02d67e9c997a0b48c098c1c6512 642 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 597 613 1.2E-5 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_02339 08b2b02d67e9c997a0b48c098c1c6512 642 SUPERFAMILY SSF46894 572 633 4.76E-12 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SYN_02339 08b2b02d67e9c997a0b48c098c1c6512 642 Gene3D G3DSA:3.30.450.20 243 378 1.2E-18 T 11-10-2018 SYN_02339 08b2b02d67e9c997a0b48c098c1c6512 642 SMART SM00091 243 312 2.2 T 11-10-2018 IPR000014 PAS domain SYN_02339 08b2b02d67e9c997a0b48c098c1c6512 642 SMART SM00091 116 183 3.9E-7 T 11-10-2018 IPR000014 PAS domain SYN_02339 08b2b02d67e9c997a0b48c098c1c6512 642 Gene3D G3DSA:3.30.450.20 119 242 3.6E-21 T 11-10-2018 SYN_02339 08b2b02d67e9c997a0b48c098c1c6512 642 SUPERFAMILY SSF55785 7 104 1.68E-11 T 11-10-2018 IPR035965 PAS domain superfamily SYN_02339 08b2b02d67e9c997a0b48c098c1c6512 642 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 240 366 5.9E-18 T 11-10-2018 IPR000014 PAS domain SYN_02339 08b2b02d67e9c997a0b48c098c1c6512 642 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 120 238 1.8E-16 T 11-10-2018 IPR000014 PAS domain SYN_02339 08b2b02d67e9c997a0b48c098c1c6512 642 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 6 109 8.7E-11 T 11-10-2018 IPR000014 PAS domain SYN_02339 08b2b02d67e9c997a0b48c098c1c6512 642 SMART SM00086 62 104 4.7 T 11-10-2018 IPR001610 PAC motif SYN_02339 08b2b02d67e9c997a0b48c098c1c6512 642 SMART SM00086 189 231 0.09 T 11-10-2018 IPR001610 PAC motif SYN_02339 08b2b02d67e9c997a0b48c098c1c6512 642 SMART SM00086 317 359 12.0 T 11-10-2018 IPR001610 PAC motif SYN_02339 08b2b02d67e9c997a0b48c098c1c6512 642 SUPERFAMILY SSF55785 229 357 5.93E-17 T 11-10-2018 IPR035965 PAS domain superfamily SYN_02339 08b2b02d67e9c997a0b48c098c1c6512 642 Pfam PF13426 PAS domain 261 358 1.3E-8 T 11-10-2018 IPR000014 PAS domain SYN_02339 08b2b02d67e9c997a0b48c098c1c6512 642 Pfam PF13426 PAS domain 8 103 0.0022 T 11-10-2018 IPR000014 PAS domain SYN_02339 08b2b02d67e9c997a0b48c098c1c6512 642 Pfam PF13426 PAS domain 128 230 2.0E-11 T 11-10-2018 IPR000014 PAS domain SYN_03215 c26838dc7ea4177809a1f9e67e11beec 939 SUPERFAMILY SSF54862 849 921 9.31E-18 T 11-10-2018 SYN_03215 c26838dc7ea4177809a1f9e67e11beec 939 Pfam PF13450 NAD(P)-binding Rossmann-like domain 516 559 5.4E-9 T 11-10-2018 SYN_03215 c26838dc7ea4177809a1f9e67e11beec 939 Gene3D G3DSA:3.50.50.60 222 279 2.5E-8 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_03215 c26838dc7ea4177809a1f9e67e11beec 939 SUPERFAMILY SSF51905 34 348 8.58E-12 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_03215 c26838dc7ea4177809a1f9e67e11beec 939 Gene3D G3DSA:3.50.50.60 510 725 2.0E-19 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_03215 c26838dc7ea4177809a1f9e67e11beec 939 Gene3D G3DSA:3.50.50.60 280 324 2.5E-8 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_03215 c26838dc7ea4177809a1f9e67e11beec 939 Gene3D G3DSA:3.30.70.3270 10 124 3.2E-8 T 11-10-2018 SYN_03215 c26838dc7ea4177809a1f9e67e11beec 939 SUPERFAMILY SSF54862 9 121 1.32E-14 T 11-10-2018 SYN_03215 c26838dc7ea4177809a1f9e67e11beec 939 Gene3D G3DSA:3.30.70.20 826 930 1.7E-12 T 11-10-2018 SYN_03215 c26838dc7ea4177809a1f9e67e11beec 939 SUPERFAMILY SSF51971 514 846 3.65E-24 T 11-10-2018 SYN_03215 c26838dc7ea4177809a1f9e67e11beec 939 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 27 38 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_03215 c26838dc7ea4177809a1f9e67e11beec 939 Pfam PF12838 4Fe-4S dicluster domain 863 911 3.0E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_03215 c26838dc7ea4177809a1f9e67e11beec 939 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 63 341 1.3E-12 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SYN_02426 b7a01d7906ba30d2ed9e4a430ed5cccf 642 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 179 350 1.3E-44 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02426 b7a01d7906ba30d2ed9e4a430ed5cccf 642 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 599 610 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_02426 b7a01d7906ba30d2ed9e4a430ed5cccf 642 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 462 545 1.1E-31 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02426 b7a01d7906ba30d2ed9e4a430ed5cccf 642 Pfam PF13237 4Fe-4S dicluster domain 562 610 7.5E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_02426 b7a01d7906ba30d2ed9e4a430ed5cccf 642 SUPERFAMILY SSF54862 562 612 9.12E-15 T 11-10-2018 SYN_02426 b7a01d7906ba30d2ed9e4a430ed5cccf 642 Gene3D G3DSA:3.10.20.600 363 457 9.5E-32 T 11-10-2018 SYN_02426 b7a01d7906ba30d2ed9e4a430ed5cccf 642 Gene3D G3DSA:3.30.70.20 561 614 3.5E-13 T 11-10-2018 SYN_02426 b7a01d7906ba30d2ed9e4a430ed5cccf 642 Gene3D G3DSA:1.20.1440.230 458 557 3.4E-35 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02426 b7a01d7906ba30d2ed9e4a430ed5cccf 642 SUPERFAMILY SSF140490 456 557 6.93E-37 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02426 b7a01d7906ba30d2ed9e4a430ed5cccf 642 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 473 484 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02426 b7a01d7906ba30d2ed9e4a430ed5cccf 642 SUPERFAMILY SSF142019 131 371 7.72E-85 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02426 b7a01d7906ba30d2ed9e4a430ed5cccf 642 Gene3D G3DSA:3.40.50.11540 184 362 9.4E-74 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02426 b7a01d7906ba30d2ed9e4a430ed5cccf 642 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 25 101 7.6E-6 T 11-10-2018 SYN_02426 b7a01d7906ba30d2ed9e4a430ed5cccf 642 Gene3D G3DSA:3.40.30.10 26 119 2.1E-26 T 11-10-2018 SYN_02426 b7a01d7906ba30d2ed9e4a430ed5cccf 642 SMART SM00928 460 505 8.2E-23 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02426 b7a01d7906ba30d2ed9e4a430ed5cccf 642 Pfam PF10531 SLBB domain 374 422 1.0E-6 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02426 b7a01d7906ba30d2ed9e4a430ed5cccf 642 SUPERFAMILY SSF52833 25 116 2.24E-22 T 11-10-2018 IPR036249 Thioredoxin-like superfamily SYN_02426 b7a01d7906ba30d2ed9e4a430ed5cccf 642 SUPERFAMILY SSF142984 372 455 5.62E-24 T 11-10-2018 SYN_01694 46bd23ffcaa1ad622fada3adb24fbf84 425 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 253 3.0E-30 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal SYN_01694 46bd23ffcaa1ad622fada3adb24fbf84 425 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 261 377 3.4E-26 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal SYN_01694 46bd23ffcaa1ad622fada3adb24fbf84 425 SUPERFAMILY SSF53901 222 423 3.84E-47 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 SYN_01694 46bd23ffcaa1ad622fada3adb24fbf84 425 SUPERFAMILY SSF53901 3 258 1.35E-47 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 SYN_01694 46bd23ffcaa1ad622fada3adb24fbf84 425 SMART SM00825 Beta-ketoacyl synthase 5 425 2.2E-11 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SYN_01694 46bd23ffcaa1ad622fada3adb24fbf84 425 Gene3D G3DSA:3.40.47.10 269 424 4.0E-32 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 SYN_01694 46bd23ffcaa1ad622fada3adb24fbf84 425 Gene3D G3DSA:3.40.47.10 1 261 1.9E-54 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 SYN_00812 7ccd9b3f08e87a3b9e00f73d7b564002 1028 SUPERFAMILY SSF63411 308 571 2.44E-60 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SYN_00812 7ccd9b3f08e87a3b9e00f73d7b564002 1028 SMART SM01264 514 763 7.3E-95 T 11-10-2018 IPR013578 Peptidase M16C associated GO:0006508 Reactome: R-HSA-1268020 SYN_00812 7ccd9b3f08e87a3b9e00f73d7b564002 1028 SUPERFAMILY SSF63411 53 302 1.47E-49 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SYN_00812 7ccd9b3f08e87a3b9e00f73d7b564002 1028 Pfam PF00675 Insulinase (Peptidase family M16) 99 188 3.5E-5 T 11-10-2018 IPR011765 Peptidase M16, N-terminal SYN_00812 7ccd9b3f08e87a3b9e00f73d7b564002 1028 Gene3D G3DSA:3.30.830.10 301 536 1.2E-69 T 11-10-2018 SYN_00812 7ccd9b3f08e87a3b9e00f73d7b564002 1028 SUPERFAMILY SSF63411 573 819 2.27E-63 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SYN_00812 7ccd9b3f08e87a3b9e00f73d7b564002 1028 Pfam PF08367 Peptidase M16C associated 514 762 1.2E-61 T 11-10-2018 IPR013578 Peptidase M16C associated GO:0006508 Reactome: R-HSA-1268020 SYN_00812 7ccd9b3f08e87a3b9e00f73d7b564002 1028 SUPERFAMILY SSF63411 834 994 1.59E-33 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SYN_00812 7ccd9b3f08e87a3b9e00f73d7b564002 1028 Gene3D G3DSA:3.30.830.10 546 990 8.5E-129 T 11-10-2018 SYN_00812 7ccd9b3f08e87a3b9e00f73d7b564002 1028 Pfam PF05193 Peptidase M16 inactive domain 254 435 4.4E-20 T 11-10-2018 IPR007863 Peptidase M16, C-terminal SYN_00812 7ccd9b3f08e87a3b9e00f73d7b564002 1028 Gene3D G3DSA:3.30.830.10 581 830 8.5E-129 T 11-10-2018 SYN_00812 7ccd9b3f08e87a3b9e00f73d7b564002 1028 Gene3D G3DSA:3.30.830.10 36 299 1.2E-88 T 11-10-2018 SYN_02699 eaef8a37115118821b40c6ba7ba5b745 448 Gene3D G3DSA:3.40.640.10 67 279 1.3E-39 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SYN_02699 eaef8a37115118821b40c6ba7ba5b745 448 Pfam PF00155 Aminotransferase class I and II 56 431 9.6E-36 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SYN_02699 eaef8a37115118821b40c6ba7ba5b745 448 Gene3D G3DSA:3.90.1150.10 280 444 1.6E-21 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SYN_02699 eaef8a37115118821b40c6ba7ba5b745 448 SUPERFAMILY SSF53383 25 436 4.81E-65 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SYN_01882 0419109f4174bb9b2c2de74e2a7de9f3 69 SUPERFAMILY SSF143011 1 47 6.47E-5 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily SYN_02880 e74994bf947d6c6e6a0c69990136ed74 835 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 671 683 - T 11-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 SYN_02880 e74994bf947d6c6e6a0c69990136ed74 835 Pfam PF00343 Carbohydrate phosphorylase 112 826 0.0 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 SYN_02880 e74994bf947d6c6e6a0c69990136ed74 835 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 25 826 0.0 T 11-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 SYN_02880 e74994bf947d6c6e6a0c69990136ed74 835 PIRSF PIRSF000460 9 835 5.5E-227 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 SYN_02880 e74994bf947d6c6e6a0c69990136ed74 835 Gene3D G3DSA:3.40.50.2000 484 811 0.0 T 11-10-2018 SYN_02880 e74994bf947d6c6e6a0c69990136ed74 835 SUPERFAMILY SSF53756 22 830 0.0 T 11-10-2018 SYN_02880 e74994bf947d6c6e6a0c69990136ed74 835 Gene3D G3DSA:3.40.50.2000 41 828 0.0 T 11-10-2018 SYN_00303 7ed47361a9be1dbc7febebd655b7bb96 270 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 90 107 1.9E-36 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SYN_00303 7ed47361a9be1dbc7febebd655b7bb96 270 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 121 135 1.9E-36 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SYN_00303 7ed47361a9be1dbc7febebd655b7bb96 270 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 33 54 1.9E-36 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SYN_00303 7ed47361a9be1dbc7febebd655b7bb96 270 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 20 27 1.9E-36 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SYN_00303 7ed47361a9be1dbc7febebd655b7bb96 270 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 64 72 1.9E-36 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SYN_00303 7ed47361a9be1dbc7febebd655b7bb96 270 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 166 183 1.9E-36 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SYN_00303 7ed47361a9be1dbc7febebd655b7bb96 270 Pfam PF02110 Hydroxyethylthiazole kinase family 13 258 2.9E-78 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SYN_00303 7ed47361a9be1dbc7febebd655b7bb96 270 PIRSF PIRSF000513 6 268 3.5E-92 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SYN_00303 7ed47361a9be1dbc7febebd655b7bb96 270 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 13 260 1.4E-82 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SYN_00303 7ed47361a9be1dbc7febebd655b7bb96 270 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 14 261 32.048 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SYN_00303 7ed47361a9be1dbc7febebd655b7bb96 270 SUPERFAMILY SSF53613 9 266 2.04E-59 T 11-10-2018 IPR029056 Ribokinase-like SYN_00303 7ed47361a9be1dbc7febebd655b7bb96 270 Gene3D G3DSA:3.40.1190.20 2 268 2.8E-93 T 11-10-2018 IPR029056 Ribokinase-like SYN_02170 1e50a22177c4a983236d44c839a4442f 526 SUPERFAMILY SSF53187 205 521 2.1E-119 T 11-10-2018 SYN_02170 1e50a22177c4a983236d44c839a4442f 526 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 372 379 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SYN_02170 1e50a22177c4a983236d44c839a4442f 526 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 210 516 1.1E-123 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SYN_02170 1e50a22177c4a983236d44c839a4442f 526 PRINTS PR00481 Cytosol aminopeptidase signature 396 411 1.7E-51 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SYN_02170 1e50a22177c4a983236d44c839a4442f 526 PRINTS PR00481 Cytosol aminopeptidase signature 346 367 1.7E-51 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SYN_02170 1e50a22177c4a983236d44c839a4442f 526 PRINTS PR00481 Cytosol aminopeptidase signature 287 304 1.7E-51 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SYN_02170 1e50a22177c4a983236d44c839a4442f 526 PRINTS PR00481 Cytosol aminopeptidase signature 368 388 1.7E-51 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SYN_02170 1e50a22177c4a983236d44c839a4442f 526 PRINTS PR00481 Cytosol aminopeptidase signature 309 330 1.7E-51 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SYN_02170 1e50a22177c4a983236d44c839a4442f 526 Gene3D G3DSA:3.40.220.10 22 200 1.3E-41 T 11-10-2018 SYN_02170 1e50a22177c4a983236d44c839a4442f 526 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 24 524 37.298 T 11-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 SYN_02170 1e50a22177c4a983236d44c839a4442f 526 SUPERFAMILY SSF52949 22 208 4.12E-29 T 11-10-2018 SYN_02170 1e50a22177c4a983236d44c839a4442f 526 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 43 169 3.7E-24 T 11-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SYN_02170 1e50a22177c4a983236d44c839a4442f 526 Gene3D G3DSA:3.40.630.10 201 522 9.0E-135 T 11-10-2018 SYN_02956 54cdad71d64a80ba8d6561382fef7554 697 Gene3D G3DSA:2.10.70.100 306 353 2.2E-14 T 11-10-2018 SYN_02956 54cdad71d64a80ba8d6561382fef7554 697 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 605 614 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site SYN_02956 54cdad71d64a80ba8d6561382fef7554 697 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 478 493 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SYN_02956 54cdad71d64a80ba8d6561382fef7554 697 Gene3D G3DSA:3.30.450.20 235 303 1.2E-13 T 11-10-2018 SYN_02956 54cdad71d64a80ba8d6561382fef7554 697 SMART SM00382 412 555 4.2E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_02956 54cdad71d64a80ba8d6561382fef7554 697 Gene3D G3DSA:3.40.50.300 379 562 3.1E-62 T 11-10-2018 SYN_02956 54cdad71d64a80ba8d6561382fef7554 697 Gene3D G3DSA:1.10.10.60 632 696 6.2E-10 T 11-10-2018 SYN_02956 54cdad71d64a80ba8d6561382fef7554 697 Pfam PF00158 Sigma-54 interaction domain 392 558 5.5E-68 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SYN_02956 54cdad71d64a80ba8d6561382fef7554 697 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 233 358 3.0E-10 T 11-10-2018 IPR000014 PAS domain SYN_02956 54cdad71d64a80ba8d6561382fef7554 697 Gene3D G3DSA:3.30.450.40 75 234 1.6E-8 T 11-10-2018 IPR029016 GAF-like domain superfamily SYN_02956 54cdad71d64a80ba8d6561382fef7554 697 SMART SM00086 309 351 2.2E-8 T 11-10-2018 IPR001610 PAC motif SYN_02956 54cdad71d64a80ba8d6561382fef7554 697 Gene3D G3DSA:1.10.8.60 563 629 1.4E-24 T 11-10-2018 SYN_02956 54cdad71d64a80ba8d6561382fef7554 697 SUPERFAMILY SSF55781 79 226 2.75E-10 T 11-10-2018 SYN_02956 54cdad71d64a80ba8d6561382fef7554 697 SUPERFAMILY SSF55785 245 354 7.25E-20 T 11-10-2018 IPR035965 PAS domain superfamily SYN_02956 54cdad71d64a80ba8d6561382fef7554 697 Pfam PF08447 PAS fold 268 344 7.8E-14 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 SYN_02956 54cdad71d64a80ba8d6561382fef7554 697 SUPERFAMILY SSF46689 604 694 4.93E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SYN_02956 54cdad71d64a80ba8d6561382fef7554 697 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 416 429 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SYN_02956 54cdad71d64a80ba8d6561382fef7554 697 SUPERFAMILY SSF52540 391 625 6.2E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02222 d8f09c7dd1e86b50790aba500ae06106 441 Gene3D G3DSA:1.10.645.10 4 433 2.4E-105 T 11-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02222 d8f09c7dd1e86b50790aba500ae06106 441 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 424 433 - T 11-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 SYN_02222 d8f09c7dd1e86b50790aba500ae06106 441 Pfam PF00374 Nickel-dependent hydrogenase 43 124 4.6E-18 T 11-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 SYN_02222 d8f09c7dd1e86b50790aba500ae06106 441 Pfam PF00374 Nickel-dependent hydrogenase 257 433 2.6E-14 T 11-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 SYN_02222 d8f09c7dd1e86b50790aba500ae06106 441 SUPERFAMILY SSF56762 4 433 2.62E-94 T 11-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02190 03b24cb8af8cc2b4260ccd0bff1048fe 265 Pfam PF01171 PP-loop family 32 205 2.6E-18 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 SYN_02190 03b24cb8af8cc2b4260ccd0bff1048fe 265 SUPERFAMILY SSF52402 9 224 6.81E-49 T 11-10-2018 SYN_02190 03b24cb8af8cc2b4260ccd0bff1048fe 265 Gene3D G3DSA:3.40.50.620 3 264 1.9E-52 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_02190 03b24cb8af8cc2b4260ccd0bff1048fe 265 PIRSF PIRSF004976 2 262 8.1E-55 T 11-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 SYN_01430 87eb410cd1bc6bdad7dd664cc811b85a 357 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 328 340 1.8E-6 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_01430 87eb410cd1bc6bdad7dd664cc811b85a 357 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 312 328 1.8E-6 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_01430 87eb410cd1bc6bdad7dd664cc811b85a 357 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 298 312 1.8E-6 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_01430 87eb410cd1bc6bdad7dd664cc811b85a 357 SMART SM00091 47 113 2.0E-6 T 11-10-2018 IPR000014 PAS domain SYN_01430 87eb410cd1bc6bdad7dd664cc811b85a 357 SMART SM00421 295 353 1.2E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_01430 87eb410cd1bc6bdad7dd664cc811b85a 357 Pfam PF00989 PAS fold 51 151 4.9E-9 T 11-10-2018 IPR013767 PAS fold GO:0006355 SYN_01430 87eb410cd1bc6bdad7dd664cc811b85a 357 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 52 167 3.1E-12 T 11-10-2018 IPR000014 PAS domain SYN_01430 87eb410cd1bc6bdad7dd664cc811b85a 357 SUPERFAMILY SSF55785 58 169 3.38E-19 T 11-10-2018 IPR035965 PAS domain superfamily SYN_01430 87eb410cd1bc6bdad7dd664cc811b85a 357 SMART SM00086 118 160 0.0037 T 11-10-2018 IPR001610 PAC motif SYN_01430 87eb410cd1bc6bdad7dd664cc811b85a 357 SUPERFAMILY SSF46894 288 344 8.84E-13 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SYN_01430 87eb410cd1bc6bdad7dd664cc811b85a 357 Gene3D G3DSA:1.10.10.10 269 355 3.5E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_01430 87eb410cd1bc6bdad7dd664cc811b85a 357 Gene3D G3DSA:3.30.450.20 42 196 9.6E-22 T 11-10-2018 SYN_01430 87eb410cd1bc6bdad7dd664cc811b85a 357 Pfam PF00196 Bacterial regulatory proteins, luxR family 297 345 1.7E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_00049 d8322ebb1bd3e19559c7e50dfce0f149 701 SUPERFAMILY SSF52210 301 456 1.7E-25 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_00049 d8322ebb1bd3e19559c7e50dfce0f149 701 SMART SM00881 4 98 7.2E-35 T 11-10-2018 IPR003781 CoA-binding GO:0048037 SYN_00049 d8322ebb1bd3e19559c7e50dfce0f149 701 SUPERFAMILY SSF51735 2 128 8.67E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_00049 d8322ebb1bd3e19559c7e50dfce0f149 701 Gene3D G3DSA:3.40.50.261 143 293 1.4E-44 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_00049 d8322ebb1bd3e19559c7e50dfce0f149 701 Gene3D G3DSA:3.40.50.720 1 127 2.7E-41 T 11-10-2018 SYN_00049 d8322ebb1bd3e19559c7e50dfce0f149 701 Gene3D G3DSA:3.30.470.20 493 696 7.2E-58 T 11-10-2018 SYN_00049 d8322ebb1bd3e19559c7e50dfce0f149 701 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 154 290 5.1E-42 T 11-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain SYN_00049 d8322ebb1bd3e19559c7e50dfce0f149 701 Pfam PF13380 CoA binding domain 9 131 2.0E-23 T 11-10-2018 IPR003781 CoA-binding GO:0048037 SYN_00049 d8322ebb1bd3e19559c7e50dfce0f149 701 SUPERFAMILY SSF52210 127 295 1.05E-29 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_00049 d8322ebb1bd3e19559c7e50dfce0f149 701 Gene3D G3DSA:3.40.50.261 299 461 2.6E-26 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_00049 d8322ebb1bd3e19559c7e50dfce0f149 701 Gene3D G3DSA:3.30.1490.20 511 582 7.2E-58 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 SYN_00049 d8322ebb1bd3e19559c7e50dfce0f149 701 SUPERFAMILY SSF56059 493 699 7.66E-29 T 11-10-2018 SYN_00049 d8322ebb1bd3e19559c7e50dfce0f149 701 Pfam PF13549 ATP-grasp domain 488 698 9.0E-51 T 11-10-2018 SYN_02958 84ef2c7ac7de60fac59ce6546dd91d1f 319 SUPERFAMILY SSF100950 4 303 3.77E-54 T 11-10-2018 IPR037171 NagB/RpiA transferase-like SYN_02958 84ef2c7ac7de60fac59ce6546dd91d1f 319 Gene3D G3DSA:3.40.50.1360 3 153 9.6E-25 T 11-10-2018 SYN_02958 84ef2c7ac7de60fac59ce6546dd91d1f 319 Gene3D G3DSA:3.40.50.1360 154 301 1.3E-23 T 11-10-2018 SYN_02958 84ef2c7ac7de60fac59ce6546dd91d1f 319 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 11 76 1.1E-4 T 11-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 SYN_02260 8899213ba37f8257ede35c4b9202c5f3 310 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 86 97 1.9E-14 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SYN_02260 8899213ba37f8257ede35c4b9202c5f3 310 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 166 179 1.9E-14 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SYN_02260 8899213ba37f8257ede35c4b9202c5f3 310 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 139 156 1.9E-14 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SYN_02260 8899213ba37f8257ede35c4b9202c5f3 310 SUPERFAMILY SSF56601 1 297 5.23E-71 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like SYN_02260 8899213ba37f8257ede35c4b9202c5f3 310 Gene3D G3DSA:3.40.710.10 26 297 1.7E-82 T 11-10-2018 SYN_02260 8899213ba37f8257ede35c4b9202c5f3 310 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 59 279 4.3E-64 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 SYN_01441 b269c634463f30a0b01d80907357e514 479 SUPERFAMILY SSF51905 29 221 1.36E-48 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_01441 b269c634463f30a0b01d80907357e514 479 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 355 459 2.8E-10 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SYN_01441 b269c634463f30a0b01d80907357e514 479 Gene3D G3DSA:3.50.50.60 139 466 1.4E-143 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_01441 b269c634463f30a0b01d80907357e514 479 Gene3D G3DSA:3.50.50.60 33 366 1.4E-143 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_01441 b269c634463f30a0b01d80907357e514 479 SUPERFAMILY SSF51905 178 343 3.63E-30 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_01441 b269c634463f30a0b01d80907357e514 479 SUPERFAMILY SSF55424 349 473 3.26E-28 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 SYN_01441 b269c634463f30a0b01d80907357e514 479 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 3.0E-24 T 11-10-2018 SYN_01441 b269c634463f30a0b01d80907357e514 479 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 130 148 3.0E-24 T 11-10-2018 SYN_01441 b269c634463f30a0b01d80907357e514 479 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 34 53 3.0E-24 T 11-10-2018 SYN_01441 b269c634463f30a0b01d80907357e514 479 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 288 310 3.0E-24 T 11-10-2018 SYN_01441 b269c634463f30a0b01d80907357e514 479 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 3.0E-24 T 11-10-2018 SYN_01441 b269c634463f30a0b01d80907357e514 479 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 33 312 1.8E-55 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SYN_01441 b269c634463f30a0b01d80907357e514 479 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 303 310 4.9E-19 T 11-10-2018 SYN_01441 b269c634463f30a0b01d80907357e514 479 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 4.9E-19 T 11-10-2018 SYN_01441 b269c634463f30a0b01d80907357e514 479 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 33 55 4.9E-19 T 11-10-2018 SYN_01441 b269c634463f30a0b01d80907357e514 479 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 4.9E-19 T 11-10-2018 SYN_01441 b269c634463f30a0b01d80907357e514 479 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 399 414 4.9E-19 T 11-10-2018 SYN_00553 1bd98f5413b0fa6a952b11382ea0f748 277 Gene3D G3DSA:2.40.10.350 180 256 1.1E-42 T 11-10-2018 SYN_00553 1bd98f5413b0fa6a952b11382ea0f748 277 Pfam PF04085 rod shape-determining protein MreC 123 268 7.3E-41 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 SYN_00553 1bd98f5413b0fa6a952b11382ea0f748 277 PIRSF PIRSF038471 1 277 7.4E-70 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 SYN_00553 1bd98f5413b0fa6a952b11382ea0f748 277 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 272 7.8E-40 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 SYN_00553 1bd98f5413b0fa6a952b11382ea0f748 277 Gene3D G3DSA:2.40.10.340 121 267 1.1E-42 T 11-10-2018 SYN_01778 45eefee55178ee0d30a37cde51c8064c 395 ProDom PD011569 METAL-BINDING IRON IRON-SULFUR 4FE-4S FERREDOXIN OXIDOREDUCTASE DOMAIN ELECTRON METHANOGENESIS A 27 304 1.0E-119 T 11-10-2018 IPR002708 Homocysteine biosynthesis enzyme, sulfur-incorporation SYN_01778 45eefee55178ee0d30a37cde51c8064c 395 Pfam PF01837 Homocysteine biosynthesis enzyme, sulfur-incorporation 25 382 5.0E-153 T 11-10-2018 IPR002708 Homocysteine biosynthesis enzyme, sulfur-incorporation SYN_00951 0448b5eb6d7d63c8f738395a487da42c 569 Pfam PF13176 Tetratricopeptide repeat 278 306 7.2E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00951 0448b5eb6d7d63c8f738395a487da42c 569 Gene3D G3DSA:1.25.40.10 440 568 5.7E-24 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00951 0448b5eb6d7d63c8f738395a487da42c 569 Pfam PF13181 Tetratricopeptide repeat 451 478 4.0E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00951 0448b5eb6d7d63c8f738395a487da42c 569 Pfam PF13181 Tetratricopeptide repeat 483 513 0.0048 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00951 0448b5eb6d7d63c8f738395a487da42c 569 SMART SM00028 207 240 120.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00951 0448b5eb6d7d63c8f738395a487da42c 569 SMART SM00028 241 274 21.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00951 0448b5eb6d7d63c8f738395a487da42c 569 SMART SM00028 275 308 1.5E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00951 0448b5eb6d7d63c8f738395a487da42c 569 SMART SM00028 413 442 34.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00951 0448b5eb6d7d63c8f738395a487da42c 569 SMART SM00028 446 479 0.19 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00951 0448b5eb6d7d63c8f738395a487da42c 569 SMART SM00028 480 513 0.039 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00951 0448b5eb6d7d63c8f738395a487da42c 569 SMART SM00028 379 412 0.0064 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00951 0448b5eb6d7d63c8f738395a487da42c 569 SMART SM00028 514 547 1.4E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00951 0448b5eb6d7d63c8f738395a487da42c 569 Gene3D G3DSA:1.25.40.10 182 334 4.7E-29 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00951 0448b5eb6d7d63c8f738395a487da42c 569 SUPERFAMILY SSF48452 189 550 1.59E-42 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00951 0448b5eb6d7d63c8f738395a487da42c 569 Gene3D G3DSA:1.25.40.10 335 439 4.7E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00951 0448b5eb6d7d63c8f738395a487da42c 569 Pfam PF07719 Tetratricopeptide repeat 515 546 2.3E-6 T 11-10-2018 IPR013105 Tetratricopeptide repeat 2 SYN_00951 0448b5eb6d7d63c8f738395a487da42c 569 Pfam PF13432 Tetratricopeptide repeat 384 442 9.0E-9 T 11-10-2018 SYN_02934 1e4482ace6a25c00ba9f5edb4307be80 217 SUPERFAMILY SSF56300 53 205 1.77E-32 T 11-10-2018 SYN_02934 1e4482ace6a25c00ba9f5edb4307be80 217 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 55 201 6.2E-28 T 11-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 SYN_02934 1e4482ace6a25c00ba9f5edb4307be80 217 Gene3D G3DSA:3.60.21.10 54 211 6.7E-40 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like SYN_02934 1e4482ace6a25c00ba9f5edb4307be80 217 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 55 201 6.0E-28 T 11-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 SYN_00123 94eaec919d2f3a8248b4d099ba88916f 527 SUPERFAMILY SSF143548 319 449 7.06E-41 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 SYN_00123 94eaec919d2f3a8248b4d099ba88916f 527 Pfam PF01842 ACT domain 456 517 1.0E-7 T 11-10-2018 IPR002912 ACT domain SYN_00123 94eaec919d2f3a8248b4d099ba88916f 527 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 3 526 5.4E-202 T 11-10-2018 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 SYN_00123 94eaec919d2f3a8248b4d099ba88916f 527 SUPERFAMILY SSF51735 102 282 5.99E-59 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_00123 94eaec919d2f3a8248b4d099ba88916f 527 Gene3D G3DSA:3.30.1330.90 318 453 6.0E-46 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 SYN_00123 94eaec919d2f3a8248b4d099ba88916f 527 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 281 1.6E-65 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SYN_00123 94eaec919d2f3a8248b4d099ba88916f 527 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 313 1.8E-35 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 SYN_00123 94eaec919d2f3a8248b4d099ba88916f 527 Gene3D G3DSA:3.30.70.260 454 527 3.1E-18 T 11-10-2018 SYN_00123 94eaec919d2f3a8248b4d099ba88916f 527 Gene3D G3DSA:3.40.50.720 4 292 8.5E-120 T 11-10-2018 SYN_00123 94eaec919d2f3a8248b4d099ba88916f 527 SUPERFAMILY SSF55021 444 524 4.58E-17 T 11-10-2018 SYN_00123 94eaec919d2f3a8248b4d099ba88916f 527 Gene3D G3DSA:3.40.50.720 94 283 8.5E-120 T 11-10-2018 SYN_00123 94eaec919d2f3a8248b4d099ba88916f 527 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 221 237 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SYN_00123 94eaec919d2f3a8248b4d099ba88916f 527 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 144 171 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 SYN_00123 94eaec919d2f3a8248b4d099ba88916f 527 SUPERFAMILY SSF52283 1 136 1.12E-36 T 11-10-2018 SYN_00123 94eaec919d2f3a8248b4d099ba88916f 527 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 192 214 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SYN_02112 d48644ea34a9eeab129c78ab20740f9e 697 SMART SM00881 4 99 1.4E-21 T 11-10-2018 IPR003781 CoA-binding GO:0048037 SYN_02112 d48644ea34a9eeab129c78ab20740f9e 697 Gene3D G3DSA:3.40.50.261 292 465 8.9E-36 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_02112 d48644ea34a9eeab129c78ab20740f9e 697 Gene3D G3DSA:3.30.1490.20 506 582 4.5E-66 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 SYN_02112 d48644ea34a9eeab129c78ab20740f9e 697 SUPERFAMILY SSF52210 294 459 1.16E-25 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_02112 d48644ea34a9eeab129c78ab20740f9e 697 SUPERFAMILY SSF56059 493 696 1.59E-35 T 11-10-2018 SYN_02112 d48644ea34a9eeab129c78ab20740f9e 697 Gene3D G3DSA:3.40.50.261 130 286 4.9E-38 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_02112 d48644ea34a9eeab129c78ab20740f9e 697 Gene3D G3DSA:3.40.50.720 1 128 6.3E-34 T 11-10-2018 SYN_02112 d48644ea34a9eeab129c78ab20740f9e 697 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 155 284 1.5E-38 T 11-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain SYN_02112 d48644ea34a9eeab129c78ab20740f9e 697 SUPERFAMILY SSF52210 130 287 2.62E-30 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_02112 d48644ea34a9eeab129c78ab20740f9e 697 SUPERFAMILY SSF51735 2 129 6.06E-29 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_02112 d48644ea34a9eeab129c78ab20740f9e 697 Pfam PF13549 ATP-grasp domain 483 695 4.9E-61 T 11-10-2018 SYN_02112 d48644ea34a9eeab129c78ab20740f9e 697 Pfam PF13380 CoA binding domain 9 133 1.3E-15 T 11-10-2018 IPR003781 CoA-binding GO:0048037 SYN_02112 d48644ea34a9eeab129c78ab20740f9e 697 Gene3D G3DSA:3.30.470.20 489 695 4.5E-66 T 11-10-2018 SYN_01879 6e93f33c1efb2d3b930ded7f84baba2a 297 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 56 282 6.8E-35 T 11-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system SYN_00427 cc140152c0ae3967c1bf220969566bb3 700 SMART SM01142 529 694 3.1E-35 T 11-10-2018 IPR012961 ATP-dependent RNA helicase Ski2, C-terminal SYN_00427 cc140152c0ae3967c1bf220969566bb3 700 Gene3D G3DSA:3.40.50.300 43 243 3.9E-54 T 11-10-2018 SYN_00427 cc140152c0ae3967c1bf220969566bb3 700 Gene3D G3DSA:1.10.3380.30 475 694 5.5E-17 T 11-10-2018 SYN_00427 cc140152c0ae3967c1bf220969566bb3 700 Pfam PF08148 DSHCT (NUC185) domain 532 696 3.7E-23 T 11-10-2018 IPR012961 ATP-dependent RNA helicase Ski2, C-terminal SYN_00427 cc140152c0ae3967c1bf220969566bb3 700 SUPERFAMILY SSF52540 79 446 1.55E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00427 cc140152c0ae3967c1bf220969566bb3 700 SMART SM00487 64 251 1.7E-25 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain SYN_00427 cc140152c0ae3967c1bf220969566bb3 700 Pfam PF00270 DEAD/DEAH box helicase 71 218 3.3E-15 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SYN_00427 cc140152c0ae3967c1bf220969566bb3 700 SMART SM00490 337 439 9.7E-13 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_00427 cc140152c0ae3967c1bf220969566bb3 700 Gene3D G3DSA:3.40.50.300 261 469 1.0E-35 T 11-10-2018 SYN_00363 73f3381104c6af8dc254ad9d23c2759a 389 Pfam PF13183 4Fe-4S dicluster domain 30 84 1.2E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_00363 73f3381104c6af8dc254ad9d23c2759a 389 SUPERFAMILY SSF46548 7 100 1.74E-11 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SYN_00363 73f3381104c6af8dc254ad9d23c2759a 389 Pfam PF02754 Cysteine-rich domain 136 216 0.0021 T 11-10-2018 IPR004017 Cysteine-rich domain SYN_00363 73f3381104c6af8dc254ad9d23c2759a 389 Pfam PF02754 Cysteine-rich domain 246 329 5.0E-6 T 11-10-2018 IPR004017 Cysteine-rich domain SYN_00363 73f3381104c6af8dc254ad9d23c2759a 389 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 71 82 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_02078 7eb1ff63005ab76d46e5df099f326ab6 418 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 21 222 1.7E-41 T 11-10-2018 IPR005224 Sugar fermentation stimulation protein SYN_02078 7eb1ff63005ab76d46e5df099f326ab6 418 Gene3D G3DSA:2.40.50.580 15 91 8.9E-15 T 11-10-2018 SYN_02078 7eb1ff63005ab76d46e5df099f326ab6 418 Pfam PF03749 Sugar fermentation stimulation protein 26 230 2.2E-44 T 11-10-2018 IPR005224 Sugar fermentation stimulation protein SYN_02078 7eb1ff63005ab76d46e5df099f326ab6 418 Gene3D G3DSA:3.40.1350.60 93 237 3.3E-37 T 11-10-2018 SYN_02492 43a2b78b2297f529c256e0699d470606 71 Gene3D G3DSA:2.20.28.10 9 60 3.1E-26 T 11-10-2018 SYN_02492 43a2b78b2297f529c256e0699d470606 71 Pfam PF00301 Rubredoxin 11 57 1.1E-23 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 SYN_02492 43a2b78b2297f529c256e0699d470606 71 PIRSF PIRSF000071 8 71 3.4E-32 T 11-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 SYN_02492 43a2b78b2297f529c256e0699d470606 71 PRINTS PR00163 Rubredoxin signature 41 57 1.8E-10 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 SYN_02492 43a2b78b2297f529c256e0699d470606 71 PRINTS PR00163 Rubredoxin signature 11 27 1.8E-10 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 SYN_02492 43a2b78b2297f529c256e0699d470606 71 SUPERFAMILY SSF57802 8 62 1.36E-22 T 11-10-2018 SYN_02715 fafc89833de2ca7ca8fb205ffd04e82c 192 Pfam PF14334 Domain of unknown function (DUF4390) 31 185 1.7E-31 T 11-10-2018 IPR025500 Protein of unknown function DUF4390 SYN_00309 f7164910d93152a82de11a2d0eae79f4 476 SUPERFAMILY SSF89095 296 400 9.68E-36 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 SYN_00309 f7164910d93152a82de11a2d0eae79f4 476 Pfam PF02934 GatB/GatE catalytic domain 6 288 6.6E-117 T 11-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 SYN_00309 f7164910d93152a82de11a2d0eae79f4 476 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 143 157 - T 11-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 SYN_00309 f7164910d93152a82de11a2d0eae79f4 476 Gene3D G3DSA:1.10.150.380 300 412 1.0E-38 T 11-10-2018 SYN_00309 f7164910d93152a82de11a2d0eae79f4 476 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 474 4.5E-182 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 SYN_00309 f7164910d93152a82de11a2d0eae79f4 476 Pfam PF02637 GatB domain 327 474 3.8E-51 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 SYN_00309 f7164910d93152a82de11a2d0eae79f4 476 SUPERFAMILY SSF55931 4 294 4.71E-124 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 SYN_00309 f7164910d93152a82de11a2d0eae79f4 476 Gene3D G3DSA:1.10.10.410 414 475 2.2E-23 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal SYN_00309 f7164910d93152a82de11a2d0eae79f4 476 SMART SM00845 327 474 2.6E-81 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 SYN_00309 f7164910d93152a82de11a2d0eae79f4 476 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 475 39.668 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 SYN_01045 dffd9131994295953604871a4163bf34 312 Pfam PF02625 XdhC and CoxI family 50 111 4.5E-19 T 11-10-2018 IPR003777 XdhC- CoxI SYN_01045 dffd9131994295953604871a4163bf34 312 Pfam PF13478 XdhC Rossmann domain 152 293 8.7E-33 T 11-10-2018 IPR027051 XdhC Rossmann domain SYN_01045 dffd9131994295953604871a4163bf34 312 Gene3D G3DSA:3.40.50.720 151 310 3.4E-41 T 11-10-2018 SYN_01743 35b16699f517b224da88458e18ce58fa 359 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 357 24.811 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SYN_01743 35b16699f517b224da88458e18ce58fa 359 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 39 359 2.9E-134 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SYN_01743 35b16699f517b224da88458e18ce58fa 359 Pfam PF00953 Glycosyl transferase family 4 99 282 1.2E-35 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 SYN_01743 35b16699f517b224da88458e18ce58fa 359 ProSitePatterns PS01348 MraY family signature 2. 187 198 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SYN_01743 35b16699f517b224da88458e18ce58fa 359 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SYN_01743 35b16699f517b224da88458e18ce58fa 359 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 6.0E-6 T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SYN_00839 21f93a80132d7d81b0b0b716b98dc85d 365 SUPERFAMILY SSF52540 6 239 1.73E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00839 21f93a80132d7d81b0b0b716b98dc85d 365 SUPERFAMILY SSF50331 245 361 2.55E-28 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal SYN_00839 21f93a80132d7d81b0b0b716b98dc85d 365 Pfam PF00005 ABC transporter 25 167 1.3E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_00839 21f93a80132d7d81b0b0b716b98dc85d 365 Gene3D G3DSA:2.40.50.100 284 356 1.3E-37 T 11-10-2018 SYN_00839 21f93a80132d7d81b0b0b716b98dc85d 365 SMART SM00382 32 217 3.9E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00839 21f93a80132d7d81b0b0b716b98dc85d 365 Pfam PF03459 TOBE domain 299 360 1.1E-10 T 11-10-2018 IPR005116 Transport-associated OB, type 1 SYN_00839 21f93a80132d7d81b0b0b716b98dc85d 365 Gene3D G3DSA:3.40.50.300 7 243 9.6E-66 T 11-10-2018 SYN_00839 21f93a80132d7d81b0b0b716b98dc85d 365 Gene3D G3DSA:2.40.50.140 246 360 1.3E-37 T 11-10-2018 SYN_02442 5d29cfa3ea565e2ed08c83d57cb786c2 171 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 9 164 9.1E-59 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 SYN_02442 5d29cfa3ea565e2ed08c83d57cb786c2 171 SMART SM01001 7 158 7.5E-88 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 SYN_02442 5d29cfa3ea565e2ed08c83d57cb786c2 171 Pfam PF00731 AIR carboxylase 9 155 1.1E-57 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 SYN_02442 5d29cfa3ea565e2ed08c83d57cb786c2 171 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 9 162 30.506 T 11-10-2018 IPR033747 Class I PurE SYN_02442 5d29cfa3ea565e2ed08c83d57cb786c2 171 SUPERFAMILY SSF52255 8 164 1.57E-59 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 SYN_02442 5d29cfa3ea565e2ed08c83d57cb786c2 171 PIRSF PIRSF001338 4 169 4.2E-65 T 11-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 SYN_02442 5d29cfa3ea565e2ed08c83d57cb786c2 171 Gene3D G3DSA:3.40.50.7700 1 166 5.7E-65 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 SYN_00079 d969a17653f586f46fce58057adc8a5f 421 Gene3D G3DSA:2.40.50.100 345 416 4.4E-21 T 11-10-2018 SYN_00079 d969a17653f586f46fce58057adc8a5f 421 ProSitePatterns PS00211 ABC transporters family signature. 207 221 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_00079 d969a17653f586f46fce58057adc8a5f 421 SMART SM00382 102 286 4.4E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00079 d969a17653f586f46fce58057adc8a5f 421 Gene3D G3DSA:3.40.50.300 71 311 9.6E-65 T 11-10-2018 SYN_00079 d969a17653f586f46fce58057adc8a5f 421 Pfam PF00005 ABC transporter 93 234 1.7E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_00079 d969a17653f586f46fce58057adc8a5f 421 SUPERFAMILY SSF52540 78 315 1.54E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00079 d969a17653f586f46fce58057adc8a5f 421 SUPERFAMILY SSF50331 332 421 8.32E-18 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal SYN_00079 d969a17653f586f46fce58057adc8a5f 421 Gene3D G3DSA:2.40.50.140 335 420 4.4E-21 T 11-10-2018 SYN_00079 d969a17653f586f46fce58057adc8a5f 421 Pfam PF03459 TOBE domain 358 420 2.8E-11 T 11-10-2018 IPR005116 Transport-associated OB, type 1 SYN_00890 ab1615c1728848bec7bb5af7485d165d 437 SUPERFAMILY SSF55347 137 302 6.47E-49 T 11-10-2018 SYN_00890 ab1615c1728848bec7bb5af7485d165d 437 Pfam PF01842 ACT domain 354 419 1.6E-13 T 11-10-2018 IPR002912 ACT domain SYN_00890 ab1615c1728848bec7bb5af7485d165d 437 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 128 4.6E-16 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 SYN_00890 ab1615c1728848bec7bb5af7485d165d 437 PIRSF PIRSF000098 1 434 2.2E-157 T 11-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 SYN_00890 ab1615c1728848bec7bb5af7485d165d 437 Pfam PF00742 Homoserine dehydrogenase 137 315 7.9E-61 T 11-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 SYN_00890 ab1615c1728848bec7bb5af7485d165d 437 SUPERFAMILY SSF55021 352 423 1.22E-13 T 11-10-2018 SYN_00890 ab1615c1728848bec7bb5af7485d165d 437 Gene3D G3DSA:3.30.70.260 349 422 5.3E-160 T 11-10-2018 SYN_00890 ab1615c1728848bec7bb5af7485d165d 437 SUPERFAMILY SSF51735 1 158 4.34E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_00890 ab1615c1728848bec7bb5af7485d165d 437 Gene3D G3DSA:3.40.50.720 4 340 5.3E-160 T 11-10-2018 SYN_00890 ab1615c1728848bec7bb5af7485d165d 437 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 183 205 - T 11-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 SYN_00890 ab1615c1728848bec7bb5af7485d165d 437 Gene3D G3DSA:3.30.360.10 136 348 5.3E-160 T 11-10-2018 SYN_01958 a6a33cb1f8ac7ad1c0944323184d2a8f 125 Pfam PF02391 MoaE protein 4 113 1.3E-19 T 11-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 SYN_01958 a6a33cb1f8ac7ad1c0944323184d2a8f 125 Gene3D G3DSA:3.90.1170.40 1 125 4.1E-20 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 SYN_01958 a6a33cb1f8ac7ad1c0944323184d2a8f 125 SUPERFAMILY SSF54690 3 123 5.1E-16 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 SYN_01234 363412dbf84cbbfdeeae8c9acf5f6804 596 SUPERFAMILY SSF55785 161 273 3.06E-18 T 11-10-2018 IPR035965 PAS domain superfamily SYN_01234 363412dbf84cbbfdeeae8c9acf5f6804 596 TIGRFAM TIGR00277 HDIG: HDIG domain 427 515 2.5E-7 T 11-10-2018 IPR006675 HDIG domain SYN_01234 363412dbf84cbbfdeeae8c9acf5f6804 596 SUPERFAMILY SSF109604 415 586 9.71E-35 T 11-10-2018 SYN_01234 363412dbf84cbbfdeeae8c9acf5f6804 596 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 272 396 9.5E-16 T 11-10-2018 IPR000014 PAS domain SYN_01234 363412dbf84cbbfdeeae8c9acf5f6804 596 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 154 271 6.4E-17 T 11-10-2018 IPR000014 PAS domain SYN_01234 363412dbf84cbbfdeeae8c9acf5f6804 596 Pfam PF00989 PAS fold 154 261 2.4E-11 T 11-10-2018 IPR013767 PAS fold GO:0006355 SYN_01234 363412dbf84cbbfdeeae8c9acf5f6804 596 Gene3D G3DSA:1.10.3210.10 403 591 1.2E-61 T 11-10-2018 SYN_01234 363412dbf84cbbfdeeae8c9acf5f6804 596 SMART SM00091 150 217 3.9E-6 T 11-10-2018 IPR000014 PAS domain SYN_01234 363412dbf84cbbfdeeae8c9acf5f6804 596 SMART SM00091 276 343 1.3E-6 T 11-10-2018 IPR000014 PAS domain SYN_01234 363412dbf84cbbfdeeae8c9acf5f6804 596 Gene3D G3DSA:3.40.50.2300 13 151 4.0E-40 T 11-10-2018 SYN_01234 363412dbf84cbbfdeeae8c9acf5f6804 596 Gene3D G3DSA:3.30.450.20 280 402 5.8E-21 T 11-10-2018 SYN_01234 363412dbf84cbbfdeeae8c9acf5f6804 596 SUPERFAMILY SSF55785 261 387 1.11E-20 T 11-10-2018 IPR035965 PAS domain superfamily SYN_01234 363412dbf84cbbfdeeae8c9acf5f6804 596 SMART SM00086 224 264 0.16 T 11-10-2018 IPR001610 PAC motif SYN_01234 363412dbf84cbbfdeeae8c9acf5f6804 596 SMART SM00086 349 389 81.0 T 11-10-2018 IPR001610 PAC motif SYN_01234 363412dbf84cbbfdeeae8c9acf5f6804 596 Pfam PF01966 HD domain 426 547 5.1E-19 T 11-10-2018 IPR006674 HD domain SYN_01234 363412dbf84cbbfdeeae8c9acf5f6804 596 SUPERFAMILY SSF52172 17 149 4.7E-43 T 11-10-2018 IPR011006 CheY-like superfamily SYN_01234 363412dbf84cbbfdeeae8c9acf5f6804 596 SMART SM00471 421 556 1.5E-8 T 11-10-2018 IPR003607 HD/PDEase domain SYN_01234 363412dbf84cbbfdeeae8c9acf5f6804 596 Pfam PF00072 Response regulator receiver domain 20 131 1.0E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_01234 363412dbf84cbbfdeeae8c9acf5f6804 596 Gene3D G3DSA:3.30.450.20 152 279 2.2E-21 T 11-10-2018 SYN_01234 363412dbf84cbbfdeeae8c9acf5f6804 596 SMART SM00448 18 131 2.5E-43 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_01234 363412dbf84cbbfdeeae8c9acf5f6804 596 Pfam PF13188 PAS domain 276 320 7.7E-8 T 11-10-2018 IPR000014 PAS domain SYN_00966 413f258ba162408438f480719b02224f 152 Gene3D G3DSA:3.40.1550.10 2 140 2.0E-16 T 11-10-2018 IPR028976 CheC-like superfamily SYN_00966 413f258ba162408438f480719b02224f 152 Pfam PF13690 Chemotaxis phosphatase CheX 41 114 4.9E-8 T 11-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain SYN_00966 413f258ba162408438f480719b02224f 152 SUPERFAMILY SSF103039 5 118 2.88E-10 T 11-10-2018 IPR028976 CheC-like superfamily SYN_01736 2a52d9d24acc5419499c7ae675855611 148 Gene3D G3DSA:2.40.330.20 2 145 5.6E-42 T 11-10-2018 IPR038619 MraZ superfamily SYN_01736 2a52d9d24acc5419499c7ae675855611 148 SUPERFAMILY SSF89447 3 129 9.72E-42 T 11-10-2018 IPR037914 SpoVT-AbrB domain superfamily SYN_01736 2a52d9d24acc5419499c7ae675855611 148 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 6 143 5.0E-31 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 SYN_01736 2a52d9d24acc5419499c7ae675855611 148 Pfam PF02381 MraZ protein, putative antitoxin-like 77 127 2.7E-15 T 11-10-2018 IPR020603 MraZ domain SYN_01736 2a52d9d24acc5419499c7ae675855611 148 Pfam PF02381 MraZ protein, putative antitoxin-like 4 76 7.2E-13 T 11-10-2018 IPR020603 MraZ domain SYN_01736 2a52d9d24acc5419499c7ae675855611 148 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 4 143 6.4E-37 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 SYN_01736 2a52d9d24acc5419499c7ae675855611 148 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 148 46.482 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 SYN_01654 6a9b13a3290ca51c166e4458bed43704 382 Pfam PF00378 Enoyl-CoA hydratase/isomerase 52 224 8.9E-29 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 SYN_01654 6a9b13a3290ca51c166e4458bed43704 382 TIGRFAM TIGR03200 dearomat_oah: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase 13 376 2.0E-161 T 11-10-2018 IPR017613 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase KEGG: 00362+3.7.1.21 SYN_01654 6a9b13a3290ca51c166e4458bed43704 382 Gene3D G3DSA:3.90.226.10 44 235 2.3E-34 T 11-10-2018 SYN_01654 6a9b13a3290ca51c166e4458bed43704 382 SUPERFAMILY SSF52096 51 344 5.41E-38 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily SYN_00192 40ba33dc72243c5e6f79daeef6da2afc 563 SMART SM00028 279 312 5.8E-6 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00192 40ba33dc72243c5e6f79daeef6da2afc 563 SMART SM00028 347 380 99.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00192 40ba33dc72243c5e6f79daeef6da2afc 563 SMART SM00028 381 414 47.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00192 40ba33dc72243c5e6f79daeef6da2afc 563 SMART SM00028 484 517 6.9 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00192 40ba33dc72243c5e6f79daeef6da2afc 563 SMART SM00028 143 176 0.04 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00192 40ba33dc72243c5e6f79daeef6da2afc 563 SMART SM00028 211 244 12.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00192 40ba33dc72243c5e6f79daeef6da2afc 563 SMART SM00028 518 551 0.0065 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00192 40ba33dc72243c5e6f79daeef6da2afc 563 SMART SM00028 415 448 0.0079 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00192 40ba33dc72243c5e6f79daeef6da2afc 563 SMART SM00028 449 483 19.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00192 40ba33dc72243c5e6f79daeef6da2afc 563 SMART SM00028 245 278 0.058 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00192 40ba33dc72243c5e6f79daeef6da2afc 563 SMART SM00028 109 142 3.0E-7 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00192 40ba33dc72243c5e6f79daeef6da2afc 563 SMART SM00028 41 74 5.9 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00192 40ba33dc72243c5e6f79daeef6da2afc 563 SMART SM00028 177 210 30.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00192 40ba33dc72243c5e6f79daeef6da2afc 563 SMART SM00028 75 108 0.34 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00192 40ba33dc72243c5e6f79daeef6da2afc 563 Gene3D G3DSA:1.25.40.10 341 563 9.9E-47 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00192 40ba33dc72243c5e6f79daeef6da2afc 563 SUPERFAMILY SSF48452 41 213 5.5E-35 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00192 40ba33dc72243c5e6f79daeef6da2afc 563 Gene3D G3DSA:1.25.40.10 208 340 4.9E-33 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00192 40ba33dc72243c5e6f79daeef6da2afc 563 Gene3D G3DSA:1.25.40.10 42 207 2.0E-38 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00192 40ba33dc72243c5e6f79daeef6da2afc 563 SUPERFAMILY SSF48452 183 459 1.41E-42 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00192 40ba33dc72243c5e6f79daeef6da2afc 563 Pfam PF14559 Tetratricopeptide repeat 396 451 3.6E-7 T 11-10-2018 SYN_00192 40ba33dc72243c5e6f79daeef6da2afc 563 Pfam PF13414 TPR repeat 116 155 2.1E-8 T 11-10-2018 SYN_00192 40ba33dc72243c5e6f79daeef6da2afc 563 Pfam PF13432 Tetratricopeptide repeat 55 108 4.2E-5 T 11-10-2018 SYN_00192 40ba33dc72243c5e6f79daeef6da2afc 563 Pfam PF13432 Tetratricopeptide repeat 490 550 7.1E-8 T 11-10-2018 SYN_00192 40ba33dc72243c5e6f79daeef6da2afc 563 Pfam PF13432 Tetratricopeptide repeat 216 275 9.9E-10 T 11-10-2018 SYN_00192 40ba33dc72243c5e6f79daeef6da2afc 563 Pfam PF07719 Tetratricopeptide repeat 281 312 5.6E-10 T 11-10-2018 IPR013105 Tetratricopeptide repeat 2 SYN_00192 40ba33dc72243c5e6f79daeef6da2afc 563 SUPERFAMILY SSF48452 449 560 9.87E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_01695 62082bb937fdb9de962e198d5fda6e2a 159 SUPERFAMILY SSF54637 10 138 9.18E-26 T 11-10-2018 IPR029069 HotDog domain superfamily SYN_01695 62082bb937fdb9de962e198d5fda6e2a 159 Pfam PF07977 FabA-like domain 16 118 4.5E-15 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 SYN_01695 62082bb937fdb9de962e198d5fda6e2a 159 Gene3D G3DSA:3.10.129.10 3 148 7.5E-31 T 11-10-2018 SYN_00394 3ee35618350182df8a43909d6895590d 121 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 14 106 2.0E-26 T 11-10-2018 IPR020483 Uncharacterised protein family YgbA SYN_00394 3ee35618350182df8a43909d6895590d 121 Pfam PF11756 Nitrous oxide-stimulated promoter 13 114 3.1E-43 T 11-10-2018 IPR020483 Uncharacterised protein family YgbA SYN_02889 56bbc881b37e6a30db846ed83a982d80 616 Gene3D G3DSA:3.30.1370.100 472 570 8.2E-51 T 11-10-2018 SYN_02889 56bbc881b37e6a30db846ed83a982d80 616 SUPERFAMILY SSF54211 192 327 3.75E-33 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SYN_02889 56bbc881b37e6a30db846ed83a982d80 616 Gene3D G3DSA:2.30.42.20 431 615 8.2E-51 T 11-10-2018 SYN_02889 56bbc881b37e6a30db846ed83a982d80 616 SMART SM01340 210 328 2.2E-50 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 SYN_02889 56bbc881b37e6a30db846ed83a982d80 616 Gene3D G3DSA:3.30.565.10 5 213 2.4E-59 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_02889 56bbc881b37e6a30db846ed83a982d80 616 SMART SM00853 430 573 5.7E-40 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 SYN_02889 56bbc881b37e6a30db846ed83a982d80 616 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 3 613 25.153 T 11-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 SYN_02889 56bbc881b37e6a30db846ed83a982d80 616 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 212 327 1.9E-34 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 SYN_02889 56bbc881b37e6a30db846ed83a982d80 616 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 127 4.5E-8 T 11-10-2018 SYN_02889 56bbc881b37e6a30db846ed83a982d80 616 SUPERFAMILY SSF118116 428 615 2.35E-43 T 11-10-2018 IPR037198 MutL, C-terminal domain superfamily SYN_02889 56bbc881b37e6a30db846ed83a982d80 616 SUPERFAMILY SSF55874 3 216 2.1E-50 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_02889 56bbc881b37e6a30db846ed83a982d80 616 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 95 101 - T 11-10-2018 IPR014762 DNA mismatch repair, conserved site SYN_02889 56bbc881b37e6a30db846ed83a982d80 616 Pfam PF08676 MutL C terminal dimerisation domain 431 573 1.6E-33 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 SYN_02889 56bbc881b37e6a30db846ed83a982d80 616 Gene3D G3DSA:3.30.230.10 215 327 3.4E-33 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SYN_02889 56bbc881b37e6a30db846ed83a982d80 616 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 4 308 2.1E-93 T 11-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 SYN_02419 392f138d1b18d653b14f621206aac6ee 678 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 13 208 8.5E-65 T 11-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 SYN_02419 392f138d1b18d653b14f621206aac6ee 678 SUPERFAMILY SSF56228 8 210 5.75E-62 T 11-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily SYN_02419 392f138d1b18d653b14f621206aac6ee 678 Gene3D G3DSA:1.10.569.10 240 424 1.7E-53 T 11-10-2018 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 SYN_02419 392f138d1b18d653b14f621206aac6ee 678 SUPERFAMILY SSF48310 213 626 1.7E-56 T 11-10-2018 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 SYN_02419 392f138d1b18d653b14f621206aac6ee 678 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 245 623 3.9E-53 T 11-10-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 SYN_02419 392f138d1b18d653b14f621206aac6ee 678 Gene3D G3DSA:3.60.9.10 4 213 6.4E-78 T 11-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily SYN_02419 392f138d1b18d653b14f621206aac6ee 678 Gene3D G3DSA:1.10.599.10 462 626 1.3E-22 T 11-10-2018 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 SYN_02419 392f138d1b18d653b14f621206aac6ee 678 SMART SM00790 9 209 2.2E-88 T 11-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 SYN_01606 b743b060f6111a003e46404d2035a476 465 SUPERFAMILY SSF53623 47 315 6.87E-86 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 SYN_01606 b743b060f6111a003e46404d2035a476 465 Gene3D G3DSA:3.90.190.20 317 454 4.2E-37 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 SYN_01606 b743b060f6111a003e46404d2035a476 465 Pfam PF02875 Mur ligase family, glutamate ligase domain 315 386 5.9E-11 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 SYN_01606 b743b060f6111a003e46404d2035a476 465 Pfam PF08245 Mur ligase middle domain 75 291 9.2E-15 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 SYN_01606 b743b060f6111a003e46404d2035a476 465 PIRSF PIRSF001563 27 452 2.0E-175 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 SYN_01606 b743b060f6111a003e46404d2035a476 465 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 73 96 - T 11-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 SYN_01606 b743b060f6111a003e46404d2035a476 465 TIGRFAM TIGR01499 folC: bifunctional protein FolC 53 446 2.4E-121 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 SYN_01606 b743b060f6111a003e46404d2035a476 465 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 164 179 - T 11-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 SYN_01606 b743b060f6111a003e46404d2035a476 465 Gene3D G3DSA:3.40.1190.10 27 313 3.5E-94 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 SYN_01606 b743b060f6111a003e46404d2035a476 465 SUPERFAMILY SSF53244 317 448 1.14E-30 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 SYN_03128 d93f8de77bfc1dc927d870c1a721feb7 559 Pfam PF00501 AMP-binding enzyme 38 454 1.2E-77 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 SYN_03128 d93f8de77bfc1dc927d870c1a721feb7 559 Gene3D G3DSA:3.30.300.310 451 556 6.8E-22 T 11-10-2018 SYN_03128 d93f8de77bfc1dc927d870c1a721feb7 559 Pfam PF13193 AMP-binding enzyme C-terminal domain 464 541 1.4E-12 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain SYN_03128 d93f8de77bfc1dc927d870c1a721feb7 559 Gene3D G3DSA:3.40.50.12780 17 450 8.2E-80 T 11-10-2018 SYN_03128 d93f8de77bfc1dc927d870c1a721feb7 559 ProSitePatterns PS00455 Putative AMP-binding domain signature. 196 207 - T 11-10-2018 IPR020845 AMP-binding, conserved site SYN_03128 d93f8de77bfc1dc927d870c1a721feb7 559 SUPERFAMILY SSF56801 27 553 2.75E-113 T 11-10-2018 SYN_01363 303b96e73c2d3ab218e077b689b504f9 334 SMART SM00044 111 316 1.2E-19 T 11-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 SYN_01363 303b96e73c2d3ab218e077b689b504f9 334 Gene3D G3DSA:3.30.70.1230 141 334 3.9E-60 T 11-10-2018 IPR029787 Nucleotide cyclase SYN_01363 303b96e73c2d3ab218e077b689b504f9 334 Gene3D G3DSA:3.40.50.2300 2 139 1.9E-33 T 11-10-2018 SYN_01363 303b96e73c2d3ab218e077b689b504f9 334 SMART SM00448 4 117 3.7E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_01363 303b96e73c2d3ab218e077b689b504f9 334 SUPERFAMILY SSF52172 5 121 1.85E-32 T 11-10-2018 IPR011006 CheY-like superfamily SYN_01363 303b96e73c2d3ab218e077b689b504f9 334 Pfam PF00072 Response regulator receiver domain 7 117 2.7E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_01363 303b96e73c2d3ab218e077b689b504f9 334 SUPERFAMILY SSF55073 144 330 7.22E-52 T 11-10-2018 IPR029787 Nucleotide cyclase SYN_01363 303b96e73c2d3ab218e077b689b504f9 334 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 147 327 1.7E-36 T 11-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 SYN_02933 af66418bdc916b2928c2099e20fe044d 161 SUPERFAMILY SSF54197 1 140 5.1E-36 T 11-10-2018 IPR036265 HIT-like superfamily SYN_02933 af66418bdc916b2928c2099e20fe044d 161 Gene3D G3DSA:3.30.428.10 1 157 3.5E-46 T 11-10-2018 IPR036265 HIT-like superfamily SYN_02933 af66418bdc916b2928c2099e20fe044d 161 Pfam PF01230 HIT domain 31 122 2.4E-11 T 11-10-2018 IPR001310 Histidine triad (HIT) protein SYN_03642 342ac8e9d371d10e80821600e1da81d1 115 Gene3D G3DSA:3.40.30.10 1 110 9.3E-17 T 11-10-2018 SYN_03642 342ac8e9d371d10e80821600e1da81d1 115 Pfam PF00578 AhpC/TSA family 1 80 4.5E-14 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 SYN_03642 342ac8e9d371d10e80821600e1da81d1 115 SUPERFAMILY SSF52833 2 103 3.29E-19 T 11-10-2018 IPR036249 Thioredoxin-like superfamily SYN_00471 f034dbde6bce3e0c7a413677aee19f7b 336 Gene3D G3DSA:3.40.50.10490 7 200 4.2E-62 T 11-10-2018 SYN_00471 f034dbde6bce3e0c7a413677aee19f7b 336 Gene3D G3DSA:3.10.580.10 201 325 2.5E-35 T 11-10-2018 SYN_00471 f034dbde6bce3e0c7a413677aee19f7b 336 PIRSF PIRSF004692 1 329 1.1E-122 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 SYN_00471 f034dbde6bce3e0c7a413677aee19f7b 336 Pfam PF00571 CBS domain 206 262 3.4E-4 T 11-10-2018 IPR000644 CBS domain SYN_00471 f034dbde6bce3e0c7a413677aee19f7b 336 Pfam PF00571 CBS domain 274 324 4.6E-8 T 11-10-2018 IPR000644 CBS domain SYN_00471 f034dbde6bce3e0c7a413677aee19f7b 336 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 50 319 1.5E-100 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 SYN_00471 f034dbde6bce3e0c7a413677aee19f7b 336 SUPERFAMILY SSF53697 16 324 4.67E-56 T 11-10-2018 SYN_00471 f034dbde6bce3e0c7a413677aee19f7b 336 SMART SM00116 215 263 0.01 T 11-10-2018 IPR000644 CBS domain SYN_00471 f034dbde6bce3e0c7a413677aee19f7b 336 SMART SM00116 280 328 3.3 T 11-10-2018 IPR000644 CBS domain SYN_00471 f034dbde6bce3e0c7a413677aee19f7b 336 Pfam PF01380 SIS domain 47 177 4.2E-26 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 SYN_02787 ad0391e4ea4800c69412269bd4604a5b 812 Gene3D G3DSA:3.40.50.300 320 498 1.9E-65 T 11-10-2018 SYN_02787 ad0391e4ea4800c69412269bd4604a5b 812 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 359 496 7.6E-22 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 SYN_02787 ad0391e4ea4800c69412269bd4604a5b 812 SUPERFAMILY SSF88697 17 207 1.24E-47 T 11-10-2018 IPR015947 PUA-like superfamily SYN_02787 ad0391e4ea4800c69412269bd4604a5b 812 Gene3D G3DSA:3.30.230.10 601 790 7.6E-78 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SYN_02787 ad0391e4ea4800c69412269bd4604a5b 812 Gene3D G3DSA:1.10.8.60 499 592 5.6E-33 T 11-10-2018 SYN_02787 ad0391e4ea4800c69412269bd4604a5b 812 Hamap MF_01973 Lon protease [lon]. 17 780 71.466 T 11-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 SYN_02787 ad0391e4ea4800c69412269bd4604a5b 812 Gene3D G3DSA:2.30.130.40 2 124 3.1E-34 T 11-10-2018 SYN_02787 ad0391e4ea4800c69412269bd4604a5b 812 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 578 780 2.4E-91 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 SYN_02787 ad0391e4ea4800c69412269bd4604a5b 812 Gene3D G3DSA:1.20.58.1480 129 252 2.7E-41 T 11-10-2018 SYN_02787 ad0391e4ea4800c69412269bd4604a5b 812 SMART SM00382 355 500 4.2E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_02787 ad0391e4ea4800c69412269bd4604a5b 812 PIRSF PIRSF001174 5 783 0.0 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 SYN_02787 ad0391e4ea4800c69412269bd4604a5b 812 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 17 207 6.5E-40 T 11-10-2018 IPR003111 Lon, substrate-binding domain SYN_02787 ad0391e4ea4800c69412269bd4604a5b 812 SMART SM00464 16 209 2.8E-66 T 11-10-2018 IPR003111 Lon, substrate-binding domain SYN_02787 ad0391e4ea4800c69412269bd4604a5b 812 SUPERFAMILY SSF54211 603 778 1.29E-55 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SYN_02787 ad0391e4ea4800c69412269bd4604a5b 812 SUPERFAMILY SSF52540 318 594 5.43E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02787 ad0391e4ea4800c69412269bd4604a5b 812 TIGRFAM TIGR00763 lon: endopeptidase La 18 778 1.9E-300 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 SYN_02787 ad0391e4ea4800c69412269bd4604a5b 812 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 684 692 - T 11-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 SYN_02787 ad0391e4ea4800c69412269bd4604a5b 812 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 711 730 6.5E-53 T 11-10-2018 SYN_02787 ad0391e4ea4800c69412269bd4604a5b 812 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 734 752 6.5E-53 T 11-10-2018 SYN_02787 ad0391e4ea4800c69412269bd4604a5b 812 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 603 619 6.5E-53 T 11-10-2018 SYN_02787 ad0391e4ea4800c69412269bd4604a5b 812 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 363 382 6.5E-53 T 11-10-2018 SYN_02787 ad0391e4ea4800c69412269bd4604a5b 812 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 681 700 6.5E-53 T 11-10-2018 SYN_00398 86d0bba18ded491cdd1395f8368e7394 446 Pfam PF00872 Transposase, Mutator family 49 420 1.2E-67 T 11-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 SYN_03065 86d0bba18ded491cdd1395f8368e7394 446 Pfam PF00872 Transposase, Mutator family 49 420 1.2E-67 T 11-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 SYN_03174 86d0bba18ded491cdd1395f8368e7394 446 Pfam PF00872 Transposase, Mutator family 49 420 1.2E-67 T 11-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 SYN_02166 66ef2044e6a21bf36b9cc37082003a1d 194 Pfam PF01066 CDP-alcohol phosphatidyltransferase 15 82 8.8E-16 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SYN_02166 66ef2044e6a21bf36b9cc37082003a1d 194 PIRSF PIRSF000847 11 194 4.4E-52 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 SYN_02166 66ef2044e6a21bf36b9cc37082003a1d 194 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 60 82 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SYN_02166 66ef2044e6a21bf36b9cc37082003a1d 194 Gene3D G3DSA:1.20.120.1760 4 187 2.4E-12 T 11-10-2018 SYN_02166 66ef2044e6a21bf36b9cc37082003a1d 194 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 15 188 1.3E-48 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 SYN_01792 460cffe2c4422e9910808d68c09901a7 434 Gene3D G3DSA:3.40.50.1980 34 233 2.3E-129 T 11-10-2018 SYN_01792 460cffe2c4422e9910808d68c09901a7 434 SUPERFAMILY SSF53720 24 429 9.02E-87 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 SYN_01792 460cffe2c4422e9910808d68c09901a7 434 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 3 429 43.088 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SYN_01792 460cffe2c4422e9910808d68c09901a7 434 PRINTS PR00083 Histidinol dehydrogenase signature 138 164 7.9E-91 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SYN_01792 460cffe2c4422e9910808d68c09901a7 434 PRINTS PR00083 Histidinol dehydrogenase signature 202 227 7.9E-91 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SYN_01792 460cffe2c4422e9910808d68c09901a7 434 PRINTS PR00083 Histidinol dehydrogenase signature 231 252 7.9E-91 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SYN_01792 460cffe2c4422e9910808d68c09901a7 434 PRINTS PR00083 Histidinol dehydrogenase signature 253 272 7.9E-91 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SYN_01792 460cffe2c4422e9910808d68c09901a7 434 PRINTS PR00083 Histidinol dehydrogenase signature 172 198 7.9E-91 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SYN_01792 460cffe2c4422e9910808d68c09901a7 434 PRINTS PR00083 Histidinol dehydrogenase signature 363 381 7.9E-91 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SYN_01792 460cffe2c4422e9910808d68c09901a7 434 PRINTS PR00083 Histidinol dehydrogenase signature 322 347 7.9E-91 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SYN_01792 460cffe2c4422e9910808d68c09901a7 434 PRINTS PR00083 Histidinol dehydrogenase signature 35 59 7.9E-91 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SYN_01792 460cffe2c4422e9910808d68c09901a7 434 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 35 428 1.1E-166 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SYN_01792 460cffe2c4422e9910808d68c09901a7 434 PIRSF PIRSF000099 1 432 6.8E-171 T 11-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SYN_01792 460cffe2c4422e9910808d68c09901a7 434 Pfam PF00815 Histidinol dehydrogenase 23 429 3.5E-171 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 SYN_01792 460cffe2c4422e9910808d68c09901a7 434 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 231 263 - T 11-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 SYN_01792 460cffe2c4422e9910808d68c09901a7 434 Gene3D G3DSA:3.40.50.1980 235 351 2.3E-129 T 11-10-2018 SYN_00436 1880b1268b9cad343441db42236add14 563 SUPERFAMILY SSF102114 213 562 2.09E-35 T 11-10-2018 SYN_00436 1880b1268b9cad343441db42236add14 563 SMART SM00729 249 466 6.2E-25 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SYN_00436 1880b1268b9cad343441db42236add14 563 Pfam PF04055 Radical SAM superfamily 254 408 8.6E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_00436 1880b1268b9cad343441db42236add14 563 Gene3D G3DSA:3.80.30.20 250 432 7.7E-19 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe SYN_02524 4e3b552bac26307a068105abe9029b3b 171 SUPERFAMILY SSF46785 19 144 1.8E-34 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_02524 4e3b552bac26307a068105abe9029b3b 171 Gene3D G3DSA:1.10.10.10 14 94 3.6E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_02524 4e3b552bac26307a068105abe9029b3b 171 Pfam PF01475 Ferric uptake regulator family 25 138 7.7E-28 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 SYN_02524 4e3b552bac26307a068105abe9029b3b 171 Gene3D G3DSA:3.30.1490.190 96 149 5.3E-16 T 11-10-2018 SYN_02327 7c626da42a83a9bd1f65202cf03f5bfe 754 SUPERFAMILY SSF53098 298 487 1.52E-22 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily SYN_02327 7c626da42a83a9bd1f65202cf03f5bfe 754 Gene3D G3DSA:3.30.420.10 291 497 5.1E-24 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 SYN_02327 7c626da42a83a9bd1f65202cf03f5bfe 754 Pfam PF09299 Mu transposase, C-terminal 510 563 5.3E-11 T 11-10-2018 IPR015378 Transposase-like, Mu, C-terminal SYN_02327 7c626da42a83a9bd1f65202cf03f5bfe 754 SUPERFAMILY SSF50610 509 565 1.96E-7 T 11-10-2018 IPR009004 Transposase, Mu, C-terminal SYN_02327 7c626da42a83a9bd1f65202cf03f5bfe 754 Pfam PF00665 Integrase core domain 298 406 3.7E-20 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 SYN_02327 7c626da42a83a9bd1f65202cf03f5bfe 754 SUPERFAMILY SSF46955 10 73 2.26E-6 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily SYN_00684 9e60d3ae16e68b0bde8c2537442284e9 159 SUPERFAMILY SSF55811 3 153 1.11E-19 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 SYN_00684 9e60d3ae16e68b0bde8c2537442284e9 159 ProSitePatterns PS00893 Nudix box signature. 45 66 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SYN_00684 9e60d3ae16e68b0bde8c2537442284e9 159 Pfam PF00293 NUDIX domain 5 142 8.2E-13 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 SYN_00684 9e60d3ae16e68b0bde8c2537442284e9 159 Gene3D G3DSA:3.90.79.10 2 157 4.6E-21 T 11-10-2018 SYN_01006 818b250b3b657c84958512d2a5eb021b 254 SUPERFAMILY SSF53335 20 193 1.51E-32 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_01006 818b250b3b657c84958512d2a5eb021b 254 Pfam PF13847 Methyltransferase domain 44 186 5.8E-16 T 11-10-2018 IPR025714 Methyltransferase domain SYN_01006 818b250b3b657c84958512d2a5eb021b 254 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 48 62 8.1E-6 T 11-10-2018 SYN_01006 818b250b3b657c84958512d2a5eb021b 254 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 116 128 8.1E-6 T 11-10-2018 SYN_01006 818b250b3b657c84958512d2a5eb021b 254 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 148 172 8.1E-6 T 11-10-2018 SYN_01006 818b250b3b657c84958512d2a5eb021b 254 Gene3D G3DSA:3.40.50.150 8 247 4.6E-67 T 11-10-2018 SYN_01006 818b250b3b657c84958512d2a5eb021b 254 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 119 125 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SYN_02370 174aa027505c8a5f937ad8ea31d56de4 215 PIRSF PIRSF000498 1 209 8.3E-73 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SYN_02370 174aa027505c8a5f937ad8ea31d56de4 215 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 197 5.4E-65 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SYN_02370 174aa027505c8a5f937ad8ea31d56de4 215 SUPERFAMILY SSF63380 1 88 3.15E-24 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel SYN_02370 174aa027505c8a5f937ad8ea31d56de4 215 Gene3D G3DSA:2.40.30.20 1 87 3.8E-27 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SYN_02370 174aa027505c8a5f937ad8ea31d56de4 215 Pfam PF00677 Lumazine binding domain 100 183 3.5E-24 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SYN_02370 174aa027505c8a5f937ad8ea31d56de4 215 Pfam PF00677 Lumazine binding domain 3 85 3.4E-21 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SYN_02370 174aa027505c8a5f937ad8ea31d56de4 215 Gene3D G3DSA:2.40.30.20 101 204 7.9E-35 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SYN_02370 174aa027505c8a5f937ad8ea31d56de4 215 SUPERFAMILY SSF63380 93 195 1.28E-32 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel SYN_02272 2b2e197cedd4c67af21936bfc28ee22e 516 Gene3D G3DSA:3.40.50.10090 264 489 1.2E-57 T 11-10-2018 SYN_02272 2b2e197cedd4c67af21936bfc28ee22e 516 SUPERFAMILY SSF69618 261 507 3.79E-74 T 11-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SYN_02272 2b2e197cedd4c67af21936bfc28ee22e 516 SUPERFAMILY SSF53790 10 262 7.85E-80 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 SYN_02272 2b2e197cedd4c67af21936bfc28ee22e 516 Pfam PF02602 Uroporphyrinogen-III synthase HemD 275 504 7.5E-68 T 11-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 SYN_02272 2b2e197cedd4c67af21936bfc28ee22e 516 Gene3D G3DSA:3.40.50.10090 293 427 1.2E-57 T 11-10-2018 SYN_02272 2b2e197cedd4c67af21936bfc28ee22e 516 Gene3D G3DSA:3.40.1010.10 10 127 2.6E-45 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 SYN_02272 2b2e197cedd4c67af21936bfc28ee22e 516 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 224 5.6E-49 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 SYN_02272 2b2e197cedd4c67af21936bfc28ee22e 516 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 17 31 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 SYN_02272 2b2e197cedd4c67af21936bfc28ee22e 516 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 92 125 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 SYN_02272 2b2e197cedd4c67af21936bfc28ee22e 516 Gene3D G3DSA:3.30.950.10 128 258 9.0E-44 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 SYN_02272 2b2e197cedd4c67af21936bfc28ee22e 516 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 12 248 1.7E-93 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 SYN_02272 2b2e197cedd4c67af21936bfc28ee22e 516 PIRSF PIRSF036426 2 262 1.2E-100 T 11-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 SYN_01292 5fd01e490668f2925545fb2ae9fbdeab 133 Pfam PF00072 Response regulator receiver domain 6 115 5.6E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_01292 5fd01e490668f2925545fb2ae9fbdeab 133 SUPERFAMILY SSF52172 3 123 2.42E-32 T 11-10-2018 IPR011006 CheY-like superfamily SYN_01292 5fd01e490668f2925545fb2ae9fbdeab 133 Gene3D G3DSA:3.40.50.2300 2 127 2.4E-32 T 11-10-2018 SYN_01292 5fd01e490668f2925545fb2ae9fbdeab 133 SMART SM00448 4 115 1.2E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_02058 d5876c57ede5357aaf984456a41d6035 528 Gene3D G3DSA:3.30.70.20 229 278 7.1E-7 T 11-10-2018 SYN_02058 d5876c57ede5357aaf984456a41d6035 528 Pfam PF00037 4Fe-4S binding domain 486 504 2.4E-5 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_02058 d5876c57ede5357aaf984456a41d6035 528 Pfam PF00037 4Fe-4S binding domain 255 272 5.2E-5 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_02058 d5876c57ede5357aaf984456a41d6035 528 SUPERFAMILY SSF54862 82 305 9.35E-18 T 11-10-2018 SYN_02058 d5876c57ede5357aaf984456a41d6035 528 Gene3D G3DSA:3.30.70.20 446 523 5.3E-7 T 11-10-2018 SYN_02058 d5876c57ede5357aaf984456a41d6035 528 SUPERFAMILY SSF54862 356 504 1.8E-15 T 11-10-2018 SYN_02058 d5876c57ede5357aaf984456a41d6035 528 Pfam PF12801 4Fe-4S binding domain 74 111 6.0E-12 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_02058 d5876c57ede5357aaf984456a41d6035 528 Pfam PF12801 4Fe-4S binding domain 410 423 1.3 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_02058 d5876c57ede5357aaf984456a41d6035 528 Pfam PF12801 4Fe-4S binding domain 212 242 1.7E-4 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_02058 d5876c57ede5357aaf984456a41d6035 528 Gene3D G3DSA:3.30.70.20 356 436 1.2E-7 T 11-10-2018 SYN_02058 d5876c57ede5357aaf984456a41d6035 528 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 284 295 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_02058 d5876c57ede5357aaf984456a41d6035 528 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 492 503 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_02058 d5876c57ede5357aaf984456a41d6035 528 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 257 268 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_01050 70576e88d511a5e79dd288a78d098a44 260 Gene3D G3DSA:3.40.50.150 3 167 1.4E-15 T 11-10-2018 SYN_01050 70576e88d511a5e79dd288a78d098a44 260 Pfam PF13649 Methyltransferase domain 47 120 1.2E-8 T 11-10-2018 SYN_01050 70576e88d511a5e79dd288a78d098a44 260 SUPERFAMILY SSF53335 10 228 4.42E-20 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_02085 7de9524b0714db6e0ff75af40e2524a6 453 SUPERFAMILY SSF103473 3 447 5.75E-65 T 11-10-2018 IPR036259 MFS transporter superfamily SYN_02085 7de9524b0714db6e0ff75af40e2524a6 453 ProSitePatterns PS00216 Sugar transport proteins signature 1. 57 73 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SYN_02085 7de9524b0714db6e0ff75af40e2524a6 453 Gene3D G3DSA:1.20.1250.20 243 449 4.0E-21 T 11-10-2018 SYN_02085 7de9524b0714db6e0ff75af40e2524a6 453 Pfam PF07690 Major Facilitator Superfamily 9 395 2.9E-50 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SYN_02085 7de9524b0714db6e0ff75af40e2524a6 453 Gene3D G3DSA:1.20.1720.10 3 234 1.5E-47 T 11-10-2018 SYN_00189 b04e286c99f86c1ef163c01e304e6a42 210 Gene3D G3DSA:3.30.1330.60 63 207 2.0E-36 T 11-10-2018 IPR036737 OmpA-like domain superfamily SYN_00189 b04e286c99f86c1ef163c01e304e6a42 210 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 3 207 27.752 T 11-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 SYN_00189 b04e286c99f86c1ef163c01e304e6a42 210 PRINTS PR01021 OMPA domain signature 107 129 2.1E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SYN_00189 b04e286c99f86c1ef163c01e304e6a42 210 PRINTS PR01021 OMPA domain signature 152 168 2.1E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SYN_00189 b04e286c99f86c1ef163c01e304e6a42 210 PRINTS PR01021 OMPA domain signature 137 152 2.1E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SYN_00189 b04e286c99f86c1ef163c01e304e6a42 210 Pfam PF00691 OmpA family 106 201 7.3E-22 T 11-10-2018 IPR006665 OmpA-like domain SYN_00189 b04e286c99f86c1ef163c01e304e6a42 210 SUPERFAMILY SSF103088 102 209 7.85E-35 T 11-10-2018 IPR036737 OmpA-like domain superfamily SYN_01721 188cde289293f98e2ed5849b24798a69 338 Pfam PF01409 tRNA synthetases class II core domain (F) 93 338 6.2E-105 T 11-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 SYN_01721 188cde289293f98e2ed5849b24798a69 338 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 21 86 1.9E-18 T 11-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SYN_01721 188cde289293f98e2ed5849b24798a69 338 Gene3D G3DSA:3.30.930.10 8 338 5.3E-123 T 11-10-2018 SYN_01721 188cde289293f98e2ed5849b24798a69 338 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 40 338 2.1E-105 T 11-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 SYN_01721 188cde289293f98e2ed5849b24798a69 338 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 338 47.998 T 11-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 SYN_01721 188cde289293f98e2ed5849b24798a69 338 SUPERFAMILY SSF55681 93 338 8.21E-81 T 11-10-2018 SYN_01721 188cde289293f98e2ed5849b24798a69 338 SUPERFAMILY SSF46589 15 100 1.57E-18 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 SYN_01945 9bcfd6af622c5bea8af16cfc3f23173d 346 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 14 343 37.917 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 SYN_01945 9bcfd6af622c5bea8af16cfc3f23173d 346 SUPERFAMILY SSF47648 11 79 3.4E-20 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 SYN_01945 9bcfd6af622c5bea8af16cfc3f23173d 346 Pfam PF00591 Glycosyl transferase family, a/b domain 84 333 1.4E-90 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 SYN_01945 9bcfd6af622c5bea8af16cfc3f23173d 346 Gene3D G3DSA:1.20.970.10 3 79 2.5E-28 T 11-10-2018 SYN_01945 9bcfd6af622c5bea8af16cfc3f23173d 346 SUPERFAMILY SSF52418 83 345 1.24E-94 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 SYN_01945 9bcfd6af622c5bea8af16cfc3f23173d 346 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 17 342 1.5E-122 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 SYN_01945 9bcfd6af622c5bea8af16cfc3f23173d 346 Pfam PF02885 Glycosyl transferase family, helical bundle domain 14 75 2.7E-21 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 SYN_01945 9bcfd6af622c5bea8af16cfc3f23173d 346 Gene3D G3DSA:3.40.1030.10 82 346 6.7E-102 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 SYN_01365 b6529e7a9cb1c27aab516ff6b1dc4c5c 198 ProDom PD010449 DECARBOXYLASE PYRUVOYL-DEPENDENT ARGININE SUBUNIT ALPHA CONTAINS: BETA PVLARGDC LYA DECARBOX 21 153 2.0E-33 T 11-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SYN_01365 b6529e7a9cb1c27aab516ff6b1dc4c5c 198 Hamap MF_01404 Pyruvoyl-dependent arginine decarboxylase [pdaD]. 1 198 94.26 T 11-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SYN_01365 b6529e7a9cb1c27aab516ff6b1dc4c5c 198 Gene3D G3DSA:3.50.20.10 11 194 2.5E-42 T 11-10-2018 IPR016105 Pyruvoyl-dependent histidine/arginine decarboxylase, 3-layer sandwich domain GO:0006520|GO:0016831 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SYN_01365 b6529e7a9cb1c27aab516ff6b1dc4c5c 198 Pfam PF01862 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) 21 197 4.1E-59 T 11-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SYN_01365 b6529e7a9cb1c27aab516ff6b1dc4c5c 198 TIGRFAM TIGR00286 TIGR00286: arginine decarboxylase, pyruvoyl-dependent 20 149 1.2E-40 T 11-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SYN_01365 b6529e7a9cb1c27aab516ff6b1dc4c5c 198 PIRSF PIRSF005216 18 198 9.6E-70 T 11-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SYN_01365 b6529e7a9cb1c27aab516ff6b1dc4c5c 198 SUPERFAMILY SSF56271 17 179 7.06E-48 T 11-10-2018 IPR016104 Pyruvoyl-dependent histidine/arginine decarboxylase GO:0006520|GO:0016831 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SYN_03200 8f01adf015cd2385a0d06cc941dcd4e4 93 Gene3D G3DSA:4.10.520.10 1 92 2.5E-30 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 SYN_03200 8f01adf015cd2385a0d06cc941dcd4e4 93 SUPERFAMILY SSF47729 1 90 1.62E-29 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 SYN_03200 8f01adf015cd2385a0d06cc941dcd4e4 93 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.1E-14 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SYN_03200 8f01adf015cd2385a0d06cc941dcd4e4 93 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.1E-14 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SYN_03200 8f01adf015cd2385a0d06cc941dcd4e4 93 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.1E-14 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SYN_03200 8f01adf015cd2385a0d06cc941dcd4e4 93 SMART SM00411 1 90 1.4E-31 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SYN_03200 8f01adf015cd2385a0d06cc941dcd4e4 93 Pfam PF00216 Bacterial DNA-binding protein 1 89 4.0E-29 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SYN_00603 5f271c17c76a9386002670c49b5d6a23 830 Pfam PF01568 Molydopterin dinucleotide binding domain 691 760 4.7E-15 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 SYN_00603 5f271c17c76a9386002670c49b5d6a23 830 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 728 755 - T 11-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 SYN_00603 5f271c17c76a9386002670c49b5d6a23 830 Gene3D G3DSA:3.40.228.10 553 631 4.7E-20 T 11-10-2018 SYN_00603 5f271c17c76a9386002670c49b5d6a23 830 Gene3D G3DSA:3.40.50.740 294 467 1.3E-61 T 11-10-2018 SYN_00603 5f271c17c76a9386002670c49b5d6a23 830 Pfam PF00384 Molybdopterin oxidoreductase 2 373 5.7E-25 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00603 5f271c17c76a9386002670c49b5d6a23 830 SUPERFAMILY SSF50692 621 829 1.29E-43 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily SYN_00603 5f271c17c76a9386002670c49b5d6a23 830 Gene3D G3DSA:2.40.40.20 632 830 7.3E-72 T 11-10-2018 SYN_00603 5f271c17c76a9386002670c49b5d6a23 830 Gene3D G3DSA:3.40.228.10 1 272 3.0E-78 T 11-10-2018 SYN_00603 5f271c17c76a9386002670c49b5d6a23 830 SUPERFAMILY SSF53706 1 641 2.22E-218 T 11-10-2018 SYN_00603 5f271c17c76a9386002670c49b5d6a23 830 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 1 829 0.0 T 11-10-2018 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 SYN_01576 3734518821530309f609ba037a43ed14 1451 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 310 565 5.8E-46 T 11-10-2018 IPR008275 CoA enzyme activase SYN_01576 3734518821530309f609ba037a43ed14 1451 Gene3D G3DSA:3.30.420.40 104 243 8.8E-44 T 11-10-2018 SYN_01576 3734518821530309f609ba037a43ed14 1451 SUPERFAMILY SSF53067 310 565 1.58E-31 T 11-10-2018 SYN_01576 3734518821530309f609ba037a43ed14 1451 Gene3D G3DSA:3.30.420.40 409 550 2.8E-79 T 11-10-2018 SYN_01576 3734518821530309f609ba037a43ed14 1451 Gene3D G3DSA:3.30.420.40 12 258 8.8E-44 T 11-10-2018 SYN_01576 3734518821530309f609ba037a43ed14 1451 Gene3D G3DSA:3.30.420.40 311 565 2.8E-79 T 11-10-2018 SYN_01576 3734518821530309f609ba037a43ed14 1451 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 674 891 2.2E-41 T 11-10-2018 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 SYN_01576 3734518821530309f609ba037a43ed14 1451 SUPERFAMILY SSF53067 9 260 9.2E-20 T 11-10-2018 SYN_01576 3734518821530309f609ba037a43ed14 1451 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 12 258 1.5E-13 T 11-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 SYN_01576 3734518821530309f609ba037a43ed14 1451 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 311 565 1.2E-38 T 11-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 SYN_00266 ab0d4ae1bfd968f9f0ecd9abb48d1fe4 410 Gene3D G3DSA:3.90.105.10 28 181 2.3E-98 T 11-10-2018 SYN_00266 ab0d4ae1bfd968f9f0ecd9abb48d1fe4 410 SUPERFAMILY SSF63882 9 180 3.27E-49 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_00266 ab0d4ae1bfd968f9f0ecd9abb48d1fe4 410 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 184 319 3.0E-27 T 11-10-2018 IPR001453 MoaB/Mog domain SYN_00266 ab0d4ae1bfd968f9f0ecd9abb48d1fe4 410 Pfam PF03454 MoeA C-terminal region (domain IV) 341 410 3.9E-12 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_00266 ab0d4ae1bfd968f9f0ecd9abb48d1fe4 410 Gene3D G3DSA:3.40.980.10 182 324 2.3E-98 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily SYN_00266 ab0d4ae1bfd968f9f0ecd9abb48d1fe4 410 SUPERFAMILY SSF53218 184 331 7.72E-38 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily SYN_00266 ab0d4ae1bfd968f9f0ecd9abb48d1fe4 410 SUPERFAMILY SSF63867 337 410 6.54E-15 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_00266 ab0d4ae1bfd968f9f0ecd9abb48d1fe4 410 Gene3D G3DSA:2.170.190.11 51 148 2.3E-98 T 11-10-2018 SYN_00266 ab0d4ae1bfd968f9f0ecd9abb48d1fe4 410 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 260 295 - T 11-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 SYN_00266 ab0d4ae1bfd968f9f0ecd9abb48d1fe4 410 SMART SM00852 187 326 1.6E-36 T 11-10-2018 IPR001453 MoaB/Mog domain SYN_00266 ab0d4ae1bfd968f9f0ecd9abb48d1fe4 410 Pfam PF03453 MoeA N-terminal region (domain I and II) 12 174 2.4E-37 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_00266 ab0d4ae1bfd968f9f0ecd9abb48d1fe4 410 Pfam PF00994 Probable molybdopterin binding domain 187 324 8.8E-22 T 11-10-2018 IPR001453 MoaB/Mog domain SYN_00266 ab0d4ae1bfd968f9f0ecd9abb48d1fe4 410 Gene3D G3DSA:2.40.340.10 337 410 1.1E-21 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_01274 fdae86023845effd3f7dc10c69986a7e 733 Pfam PF09397 Ftsk gamma domain 668 728 3.2E-27 T 11-10-2018 IPR018541 FtsK gamma domain SYN_01274 fdae86023845effd3f7dc10c69986a7e 733 SUPERFAMILY SSF52540 330 636 3.32E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01274 fdae86023845effd3f7dc10c69986a7e 733 SMART SM00382 392 586 2.6E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01274 fdae86023845effd3f7dc10c69986a7e 733 SMART SM00843 666 731 4.8E-37 T 11-10-2018 IPR018541 FtsK gamma domain SYN_01274 fdae86023845effd3f7dc10c69986a7e 733 Pfam PF01580 FtsK/SpoIIIE family 357 565 5.0E-65 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 SYN_01274 fdae86023845effd3f7dc10c69986a7e 733 Gene3D G3DSA:3.30.980.40 249 353 5.1E-38 T 11-10-2018 SYN_01274 fdae86023845effd3f7dc10c69986a7e 733 SUPERFAMILY SSF46785 666 729 6.12E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_01274 fdae86023845effd3f7dc10c69986a7e 733 Gene3D G3DSA:1.10.10.10 659 727 4.1E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_01274 fdae86023845effd3f7dc10c69986a7e 733 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 17 183 4.0E-35 T 11-10-2018 IPR025199 DNA translocase FtsK, 4TM region SYN_01274 fdae86023845effd3f7dc10c69986a7e 733 Gene3D G3DSA:3.40.50.300 354 651 1.1E-114 T 11-10-2018 SYN_02777 6655f3ff69e495a254ef160f061e4dd4 611 Gene3D G3DSA:2.40.50.920 29 100 6.4E-8 T 11-10-2018 SYN_02777 6655f3ff69e495a254ef160f061e4dd4 611 Pfam PF01434 Peptidase family M41 384 590 1.1E-79 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 SYN_02777 6655f3ff69e495a254ef160f061e4dd4 611 SMART SM00382 185 324 1.0E-24 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_02777 6655f3ff69e495a254ef160f061e4dd4 611 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 601 36.936 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 SYN_02777 6655f3ff69e495a254ef160f061e4dd4 611 Gene3D G3DSA:3.40.50.300 137 323 6.2E-71 T 11-10-2018 SYN_02777 6655f3ff69e495a254ef160f061e4dd4 611 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 101 592 3.1E-232 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 SYN_02777 6655f3ff69e495a254ef160f061e4dd4 611 Gene3D G3DSA:1.20.58.760 403 605 1.7E-74 T 11-10-2018 SYN_02777 6655f3ff69e495a254ef160f061e4dd4 611 SUPERFAMILY SSF52540 143 392 3.75E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02777 6655f3ff69e495a254ef160f061e4dd4 611 Gene3D G3DSA:1.10.8.60 324 400 1.8E-25 T 11-10-2018 SYN_02777 6655f3ff69e495a254ef160f061e4dd4 611 Pfam PF06480 FtsH Extracellular 11 93 1.6E-10 T 11-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 SYN_02777 6655f3ff69e495a254ef160f061e4dd4 611 ProSitePatterns PS00674 AAA-protein family signature. 292 310 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 SYN_02777 6655f3ff69e495a254ef160f061e4dd4 611 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 189 321 7.3E-45 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 SYN_02777 6655f3ff69e495a254ef160f061e4dd4 611 SUPERFAMILY SSF140990 403 592 6.8E-70 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 SYN_01941 5cd1c53519d56985a3fb6807c13b2c54 265 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 259 2.3E-85 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SYN_01941 5cd1c53519d56985a3fb6807c13b2c54 265 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 262 37.56 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SYN_01941 5cd1c53519d56985a3fb6807c13b2c54 265 SUPERFAMILY SSF51366 1 247 1.41E-94 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 SYN_01941 5cd1c53519d56985a3fb6807c13b2c54 265 Pfam PF00290 Tryptophan synthase alpha chain 8 263 8.6E-95 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SYN_01941 5cd1c53519d56985a3fb6807c13b2c54 265 Gene3D G3DSA:3.20.20.70 1 265 4.9E-112 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_00706 3a5392014de1564354608f844c06234b 295 Gene3D G3DSA:3.10.310.10 21 286 1.4E-82 T 11-10-2018 SYN_00706 3a5392014de1564354608f844c06234b 295 Gene3D G3DSA:3.10.310.10 135 280 1.4E-82 T 11-10-2018 SYN_00706 3a5392014de1564354608f844c06234b 295 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 17 287 5.3E-74 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 SYN_00706 3a5392014de1564354608f844c06234b 295 SUPERFAMILY SSF54506 17 145 6.5E-35 T 11-10-2018 SYN_00706 3a5392014de1564354608f844c06234b 295 SUPERFAMILY SSF54506 158 288 2.79E-38 T 11-10-2018 SYN_00706 3a5392014de1564354608f844c06234b 295 Pfam PF01678 Diaminopimelate epimerase 21 139 3.5E-32 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 SYN_00706 3a5392014de1564354608f844c06234b 295 Pfam PF01678 Diaminopimelate epimerase 169 282 8.9E-20 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 SYN_00706 3a5392014de1564354608f844c06234b 295 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 17 290 32.742 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 SYN_00977 a550ade4286fe386f4c5bd61364493cb 467 Gene3D G3DSA:1.10.287.950 203 463 1.7E-61 T 11-10-2018 SYN_00977 a550ade4286fe386f4c5bd61364493cb 467 SUPERFAMILY SSF103190 64 175 1.57E-12 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily SYN_00977 a550ade4286fe386f4c5bd61364493cb 467 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 280 430 6.9E-43 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SYN_00977 a550ade4286fe386f4c5bd61364493cb 467 Pfam PF17202 Single cache domain 3 75 177 1.2E-33 T 11-10-2018 IPR033463 Single cache domain 3 SYN_00977 a550ade4286fe386f4c5bd61364493cb 467 SMART SM00283 216 463 8.1E-67 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SYN_00977 a550ade4286fe386f4c5bd61364493cb 467 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 237 266 2.1E-39 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 SYN_00977 a550ade4286fe386f4c5bd61364493cb 467 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 314 341 2.1E-39 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 SYN_00977 a550ade4286fe386f4c5bd61364493cb 467 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 391 420 2.1E-39 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 SYN_00977 a550ade4286fe386f4c5bd61364493cb 467 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 343 372 2.1E-39 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 SYN_00977 a550ade4286fe386f4c5bd61364493cb 467 SUPERFAMILY SSF58104 208 462 6.93E-58 T 11-10-2018 SYN_01408 762669aeb6ea45bfdad0e4b508d29594 372 Gene3D G3DSA:3.10.350.10 110 162 1.1E-13 T 11-10-2018 IPR036779 LysM domain superfamily SYN_01408 762669aeb6ea45bfdad0e4b508d29594 372 Gene3D G3DSA:3.90.1720.10 221 353 4.4E-42 T 11-10-2018 SYN_01408 762669aeb6ea45bfdad0e4b508d29594 372 Pfam PF00877 NlpC/P60 family 236 343 1.2E-29 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain SYN_01408 762669aeb6ea45bfdad0e4b508d29594 372 SUPERFAMILY SSF54106 42 85 2.35E-10 T 11-10-2018 SYN_01408 762669aeb6ea45bfdad0e4b508d29594 372 Pfam PF01476 LysM domain 43 85 5.8E-12 T 11-10-2018 IPR018392 LysM domain SYN_01408 762669aeb6ea45bfdad0e4b508d29594 372 Pfam PF01476 LysM domain 115 156 7.1E-12 T 11-10-2018 IPR018392 LysM domain SYN_01408 762669aeb6ea45bfdad0e4b508d29594 372 SMART SM00257 114 157 1.3E-12 T 11-10-2018 IPR018392 LysM domain SYN_01408 762669aeb6ea45bfdad0e4b508d29594 372 SMART SM00257 42 85 1.1E-14 T 11-10-2018 IPR018392 LysM domain SYN_01408 762669aeb6ea45bfdad0e4b508d29594 372 SUPERFAMILY SSF54001 221 346 1.42E-41 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily SYN_01408 762669aeb6ea45bfdad0e4b508d29594 372 Gene3D G3DSA:3.10.350.10 34 101 8.1E-16 T 11-10-2018 IPR036779 LysM domain superfamily SYN_01408 762669aeb6ea45bfdad0e4b508d29594 372 SUPERFAMILY SSF54106 114 156 5.89E-9 T 11-10-2018 SYN_01282 1970e9dc57afe1ced6d9c82e5f13b2ae 249 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 3 78 2.5E-17 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 SYN_01282 1970e9dc57afe1ced6d9c82e5f13b2ae 249 SUPERFAMILY SSF75217 72 243 4.06E-47 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases SYN_01282 1970e9dc57afe1ced6d9c82e5f13b2ae 249 Gene3D G3DSA:3.30.1330.30 1 74 1.9E-13 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like SYN_01282 1970e9dc57afe1ced6d9c82e5f13b2ae 249 SMART SM00967 3 79 6.3E-18 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 SYN_01282 1970e9dc57afe1ced6d9c82e5f13b2ae 249 SUPERFAMILY SSF55315 2 73 6.47E-14 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like SYN_01282 1970e9dc57afe1ced6d9c82e5f13b2ae 249 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 2 241 1.2E-67 T 11-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 SYN_01282 1970e9dc57afe1ced6d9c82e5f13b2ae 249 Gene3D G3DSA:3.40.1280.10 75 242 4.1E-56 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SYN_01282 1970e9dc57afe1ced6d9c82e5f13b2ae 249 Pfam PF00588 SpoU rRNA Methylase family 96 236 8.2E-40 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SYN_00295 674b03175d831215bf44f11a2e195f33 1423 Pfam PF12439 Glycogen debranching enzyme N terminal 769 995 1.3E-29 T 11-10-2018 IPR024742 Glycogen debranching enzyme, bacterial and archaeal type, N-terminal SYN_00295 674b03175d831215bf44f11a2e195f33 1423 Pfam PF06202 Amylo-alpha-1,6-glucosidase 1045 1415 1.2E-65 T 11-10-2018 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-6798695|Reactome: R-HSA-70221 SYN_00295 674b03175d831215bf44f11a2e195f33 1423 SUPERFAMILY SSF48208 942 1417 6.8E-56 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 SYN_00295 674b03175d831215bf44f11a2e195f33 1423 SMART SM00642 164 479 1.7E-5 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SYN_00295 674b03175d831215bf44f11a2e195f33 1423 Pfam PF00128 Alpha amylase, catalytic domain 236 378 1.4E-5 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SYN_00295 674b03175d831215bf44f11a2e195f33 1423 SUPERFAMILY SSF51445 159 491 9.22E-50 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily SYN_00295 674b03175d831215bf44f11a2e195f33 1423 Gene3D G3DSA:3.20.20.80 130 493 2.0E-70 T 11-10-2018 SYN_00295 674b03175d831215bf44f11a2e195f33 1423 Gene3D G3DSA:1.50.10.10 1056 1370 1.3E-22 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 SYN_00770 6a7514e2c0bb19e3ecab78c5fd8824fb 115 PRINTS PR00061 Ribosomal protein L19 signature 87 112 1.5E-40 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00770 6a7514e2c0bb19e3ecab78c5fd8824fb 115 PRINTS PR00061 Ribosomal protein L19 signature 33 62 1.5E-40 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00770 6a7514e2c0bb19e3ecab78c5fd8824fb 115 PRINTS PR00061 Ribosomal protein L19 signature 3 32 1.5E-40 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00770 6a7514e2c0bb19e3ecab78c5fd8824fb 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 112 7.1E-48 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00770 6a7514e2c0bb19e3ecab78c5fd8824fb 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 85 100 - T 11-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_00770 6a7514e2c0bb19e3ecab78c5fd8824fb 115 PIRSF PIRSF002191 1 115 3.7E-48 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00770 6a7514e2c0bb19e3ecab78c5fd8824fb 115 Gene3D G3DSA:2.30.30.790 6 115 3.6E-17 T 11-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00770 6a7514e2c0bb19e3ecab78c5fd8824fb 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 113 30.358 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00770 6a7514e2c0bb19e3ecab78c5fd8824fb 115 Pfam PF01245 Ribosomal protein L19 3 111 2.0E-49 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00770 6a7514e2c0bb19e3ecab78c5fd8824fb 115 SUPERFAMILY SSF50104 1 114 4.21E-46 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily SYN_02676 6d713e650e6b8de4d6c7402c488d7842 666 Pfam PF16889 Heparinase II/III N-terminus 112 368 4.3E-17 T 11-10-2018 IPR031680 Heparin-sulfate lyase, N-terminal MetaCyc: PWY-7651 SYN_02676 6d713e650e6b8de4d6c7402c488d7842 666 SUPERFAMILY SSF48230 124 372 5.13E-22 T 11-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 SYN_02676 6d713e650e6b8de4d6c7402c488d7842 666 Gene3D G3DSA:2.70.98.70 431 655 1.1E-21 T 11-10-2018 SYN_02676 6d713e650e6b8de4d6c7402c488d7842 666 Gene3D G3DSA:1.50.10.100 35 380 8.7E-55 T 11-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 SYN_02676 6d713e650e6b8de4d6c7402c488d7842 666 Pfam PF07940 Heparinase II/III-like protein 429 655 1.7E-39 T 11-10-2018 IPR012480 Heparinase II/III-like GO:0016829 SYN_02861 9f3779f523962ee42339032546deeb48 152 SUPERFAMILY SSF55729 1 150 5.82E-21 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase SYN_02861 9f3779f523962ee42339032546deeb48 152 Pfam PF00583 Acetyltransferase (GNAT) family 40 117 5.2E-12 T 11-10-2018 IPR000182 GNAT domain SYN_02861 9f3779f523962ee42339032546deeb48 152 Gene3D G3DSA:3.40.630.30 2 142 1.1E-27 T 11-10-2018 SYN_01298 328eede77136be434bbbca7e938cc367 572 SMART SM00487 21 220 7.0E-55 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain SYN_01298 328eede77136be434bbbca7e938cc367 572 Pfam PF00270 DEAD/DEAH box helicase 26 192 6.2E-45 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SYN_01298 328eede77136be434bbbca7e938cc367 572 SMART SM00490 256 337 1.9E-30 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_01298 328eede77136be434bbbca7e938cc367 572 Gene3D G3DSA:3.30.70.330 470 544 1.1E-10 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily SYN_01298 328eede77136be434bbbca7e938cc367 572 SUPERFAMILY SSF52540 71 358 2.72E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01298 328eede77136be434bbbca7e938cc367 572 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SYN_01298 328eede77136be434bbbca7e938cc367 572 Pfam PF00271 Helicase conserved C-terminal domain 244 337 1.5E-26 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_01298 328eede77136be434bbbca7e938cc367 572 Gene3D G3DSA:3.40.50.300 214 443 2.7E-46 T 11-10-2018 SYN_01298 328eede77136be434bbbca7e938cc367 572 Pfam PF03880 DbpA RNA binding domain 471 540 6.7E-16 T 11-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain SYN_01298 328eede77136be434bbbca7e938cc367 572 Gene3D G3DSA:3.40.50.300 2 208 6.8E-69 T 11-10-2018 SYN_01638 508902eb754076b000d571a505e87cbf 555 Gene3D G3DSA:3.40.50.980 195 366 2.5E-43 T 11-10-2018 SYN_01638 508902eb754076b000d571a505e87cbf 555 Gene3D G3DSA:2.30.38.10 367 442 1.7E-28 T 11-10-2018 SYN_01638 508902eb754076b000d571a505e87cbf 555 Gene3D G3DSA:3.30.300.310 444 548 1.6E-29 T 11-10-2018 SYN_01638 508902eb754076b000d571a505e87cbf 555 Gene3D G3DSA:3.40.50.980 24 182 3.6E-38 T 11-10-2018 SYN_01638 508902eb754076b000d571a505e87cbf 555 SUPERFAMILY SSF56801 8 546 4.58E-126 T 11-10-2018 SYN_01638 508902eb754076b000d571a505e87cbf 555 Pfam PF00501 AMP-binding enzyme 34 448 8.7E-66 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 SYN_01638 508902eb754076b000d571a505e87cbf 555 Pfam PF13193 AMP-binding enzyme C-terminal domain 457 533 5.4E-13 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain SYN_03150 44b0bbc1d44774c0c5c0970b48ac3d15 142 SUPERFAMILY SSF55811 21 133 4.87E-20 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 SYN_03150 44b0bbc1d44774c0c5c0970b48ac3d15 142 Pfam PF00293 NUDIX domain 24 79 9.4E-14 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 SYN_03150 44b0bbc1d44774c0c5c0970b48ac3d15 142 PRINTS PR00502 NUDIX hydrolase family signature 57 72 5.2E-7 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 SYN_03150 44b0bbc1d44774c0c5c0970b48ac3d15 142 PRINTS PR00502 NUDIX hydrolase family signature 43 57 5.2E-7 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 SYN_03150 44b0bbc1d44774c0c5c0970b48ac3d15 142 Gene3D G3DSA:3.90.79.10 1 141 7.1E-25 T 11-10-2018 SYN_03150 44b0bbc1d44774c0c5c0970b48ac3d15 142 ProSitePatterns PS00893 Nudix box signature. 48 69 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SYN_01331 d8a3b02a5643b7c4b0e55aa189803983 850 Gene3D G3DSA:3.40.50.2000 119 242 2.5E-10 T 11-10-2018 SYN_01331 d8a3b02a5643b7c4b0e55aa189803983 850 SUPERFAMILY SSF53756 12 745 1.17E-202 T 11-10-2018 SYN_01331 d8a3b02a5643b7c4b0e55aa189803983 850 Gene3D G3DSA:3.40.50.2000 419 722 1.8E-38 T 11-10-2018 SYN_01331 d8a3b02a5643b7c4b0e55aa189803983 850 Pfam PF00343 Carbohydrate phosphorylase 273 622 2.1E-18 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 SYN_01331 d8a3b02a5643b7c4b0e55aa189803983 850 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 600 612 - T 11-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 SYN_01331 d8a3b02a5643b7c4b0e55aa189803983 850 Gene3D G3DSA:3.40.50.2000 269 418 1.0E-10 T 11-10-2018 SYN_01331 d8a3b02a5643b7c4b0e55aa189803983 850 TIGRFAM TIGR02094 more_P_ylases: alpha-glucan phosphorylases 110 710 8.0E-252 T 11-10-2018 IPR011834 Alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 SYN_01331 d8a3b02a5643b7c4b0e55aa189803983 850 PIRSF PIRSF000460 2 795 4.9E-258 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 SYN_01331 d8a3b02a5643b7c4b0e55aa189803983 850 Pfam PF11897 Protein of unknown function (DUF3417) 15 122 8.4E-32 T 11-10-2018 IPR024517 Glycogen phosphorylase, domain of unknown function DUF3417 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 SYN_01374 7c29b068c983779d92a6ec93a7b2bb9a 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 486 504 3.9E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01374 7c29b068c983779d92a6ec93a7b2bb9a 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 483 3.9E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01374 7c29b068c983779d92a6ec93a7b2bb9a 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 469 3.9E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01374 7c29b068c983779d92a6ec93a7b2bb9a 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 524 3.9E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01374 7c29b068c983779d92a6ec93a7b2bb9a 528 Gene3D G3DSA:3.30.565.10 369 527 1.9E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_01374 7c29b068c983779d92a6ec93a7b2bb9a 528 Gene3D G3DSA:3.30.450.20 126 243 4.7E-22 T 11-10-2018 SYN_01374 7c29b068c983779d92a6ec93a7b2bb9a 528 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 132 251 3.4E-23 T 11-10-2018 IPR000014 PAS domain SYN_01374 7c29b068c983779d92a6ec93a7b2bb9a 528 Gene3D G3DSA:3.30.450.20 13 125 4.8E-10 T 11-10-2018 SYN_01374 7c29b068c983779d92a6ec93a7b2bb9a 528 SMART SM00387 410 527 4.4E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_01374 7c29b068c983779d92a6ec93a7b2bb9a 528 SUPERFAMILY SSF55785 35 133 5.23E-9 T 11-10-2018 IPR035965 PAS domain superfamily SYN_01374 7c29b068c983779d92a6ec93a7b2bb9a 528 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 412 526 1.9E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_01374 7c29b068c983779d92a6ec93a7b2bb9a 528 SUPERFAMILY SSF55874 370 525 2.88E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_01374 7c29b068c983779d92a6ec93a7b2bb9a 528 Pfam PF13188 PAS domain 25 71 0.022 T 11-10-2018 IPR000014 PAS domain SYN_01374 7c29b068c983779d92a6ec93a7b2bb9a 528 Pfam PF08447 PAS fold 159 236 3.3E-12 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 SYN_01374 7c29b068c983779d92a6ec93a7b2bb9a 528 SMART SM00091 136 201 1.2E-5 T 11-10-2018 IPR000014 PAS domain SYN_01374 7c29b068c983779d92a6ec93a7b2bb9a 528 SMART SM00091 22 88 2.5 T 11-10-2018 IPR000014 PAS domain SYN_01374 7c29b068c983779d92a6ec93a7b2bb9a 528 SUPERFAMILY SSF55785 121 245 1.74E-26 T 11-10-2018 IPR035965 PAS domain superfamily SYN_01374 7c29b068c983779d92a6ec93a7b2bb9a 528 Pfam PF00512 His Kinase A (phospho-acceptor) domain 264 366 3.4E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_01374 7c29b068c983779d92a6ec93a7b2bb9a 528 SMART SM00086 207 247 1.8E-5 T 11-10-2018 IPR001610 PAC motif SYN_03313 b746d051a9ccef43a848222daffdcfed 106 ProSitePatterns PS01108 Ribosomal protein L24 signature. 9 26 - T 11-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_03313 b746d051a9ccef43a848222daffdcfed 106 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 4 103 2.6E-36 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_03313 b746d051a9ccef43a848222daffdcfed 106 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 4 98 20.691 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_03313 b746d051a9ccef43a848222daffdcfed 106 Pfam PF00467 KOW motif 8 39 4.4E-9 T 11-10-2018 IPR005824 KOW SYN_03313 b746d051a9ccef43a848222daffdcfed 106 Gene3D G3DSA:2.30.30.30 2 102 9.3E-37 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 SYN_03313 b746d051a9ccef43a848222daffdcfed 106 SMART SM00739 5 32 9.5E-6 T 11-10-2018 IPR005824 KOW SYN_03313 b746d051a9ccef43a848222daffdcfed 106 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 42 103 7.7E-28 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_03313 b746d051a9ccef43a848222daffdcfed 106 SUPERFAMILY SSF50104 4 103 1.03E-33 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily SYN_00561 03d11e16cbbcd45c797cc82627d96404 435 Pfam PF11799 impB/mucB/samB family C-terminal domain 250 360 5.6E-13 T 11-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 SYN_00561 03d11e16cbbcd45c797cc82627d96404 435 Gene3D G3DSA:1.10.150.20 185 237 2.0E-10 T 11-10-2018 SYN_00561 03d11e16cbbcd45c797cc82627d96404 435 Pfam PF00817 impB/mucB/samB family 18 163 1.3E-45 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 SYN_00561 03d11e16cbbcd45c797cc82627d96404 435 Pfam PF11798 IMS family HHH motif 178 206 8.5E-6 T 11-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 SYN_00561 03d11e16cbbcd45c797cc82627d96404 435 Gene3D G3DSA:3.30.70.270 15 170 5.3E-52 T 11-10-2018 SYN_00561 03d11e16cbbcd45c797cc82627d96404 435 Gene3D G3DSA:2.30.40.20 23 83 5.3E-52 T 11-10-2018 SYN_00561 03d11e16cbbcd45c797cc82627d96404 435 SUPERFAMILY SSF56672 15 243 1.33E-70 T 11-10-2018 SYN_00561 03d11e16cbbcd45c797cc82627d96404 435 Hamap MF_01113 DNA polymerase IV [dinB]. 12 361 28.147 T 11-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 SYN_00561 03d11e16cbbcd45c797cc82627d96404 435 SUPERFAMILY SSF100879 253 346 1.33E-6 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 SYN_00443 1a133dde8afd1f86e9cf313224c60694 313 SUPERFAMILY SSF141523 100 202 1.96E-11 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like SYN_00443 1a133dde8afd1f86e9cf313224c60694 313 Gene3D G3DSA:2.40.440.10 84 213 1.5E-6 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like SYN_00443 1a133dde8afd1f86e9cf313224c60694 313 Pfam PF03734 L,D-transpeptidase catalytic domain 85 205 1.9E-9 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 SYN_01236 ab846b02bd2d05eab907f1ed9f79ed6f 688 Gene3D G3DSA:1.10.287.950 372 688 3.3E-61 T 11-10-2018 SYN_01236 ab846b02bd2d05eab907f1ed9f79ed6f 688 Gene3D G3DSA:3.30.450.20 168 295 1.3E-30 T 11-10-2018 SYN_01236 ab846b02bd2d05eab907f1ed9f79ed6f 688 SMART SM00304 319 372 3.2E-14 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SYN_01236 ab846b02bd2d05eab907f1ed9f79ed6f 688 Pfam PF02743 Cache domain 36 281 2.0E-31 T 11-10-2018 IPR033479 Double Cache domain 1 SYN_01236 ab846b02bd2d05eab907f1ed9f79ed6f 688 SUPERFAMILY SSF103190 121 200 4.19E-7 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily SYN_01236 ab846b02bd2d05eab907f1ed9f79ed6f 688 Gene3D G3DSA:1.20.1480.50 296 371 1.5E-20 T 11-10-2018 SYN_01236 ab846b02bd2d05eab907f1ed9f79ed6f 688 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 471 654 9.9E-39 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SYN_01236 ab846b02bd2d05eab907f1ed9f79ed6f 688 SUPERFAMILY SSF58104 339 688 4.05E-65 T 11-10-2018 SYN_01236 ab846b02bd2d05eab907f1ed9f79ed6f 688 SMART SM00283 419 687 3.8E-54 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SYN_01236 ab846b02bd2d05eab907f1ed9f79ed6f 688 Pfam PF00672 HAMP domain 319 369 3.9E-14 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SYN_01377 6baad29da2a995921c15b10a898030d4 662 SMART SM00790 8 207 2.1E-80 T 11-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 SYN_01377 6baad29da2a995921c15b10a898030d4 662 SUPERFAMILY SSF48310 213 659 2.49E-67 T 11-10-2018 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 SYN_01377 6baad29da2a995921c15b10a898030d4 662 Gene3D G3DSA:1.10.569.10 250 444 1.0E-53 T 11-10-2018 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 SYN_01377 6baad29da2a995921c15b10a898030d4 662 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 10 206 3.1E-61 T 11-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 SYN_01377 6baad29da2a995921c15b10a898030d4 662 Gene3D G3DSA:1.10.599.10 494 649 3.6E-21 T 11-10-2018 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 SYN_01377 6baad29da2a995921c15b10a898030d4 662 Gene3D G3DSA:3.60.9.10 1 211 1.2E-73 T 11-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily SYN_01377 6baad29da2a995921c15b10a898030d4 662 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 234 646 5.6E-56 T 11-10-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 SYN_01377 6baad29da2a995921c15b10a898030d4 662 SUPERFAMILY SSF56228 5 209 2.35E-60 T 11-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily SYN_00182 d9fd2fcddf8a55a153956caf4534f22d 339 Pfam PF04055 Radical SAM superfamily 111 262 2.2E-9 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_00182 d9fd2fcddf8a55a153956caf4534f22d 339 PIRSF PIRSF004911 1 338 7.4E-133 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase SYN_00182 d9fd2fcddf8a55a153956caf4534f22d 339 SUPERFAMILY SSF102114 94 329 7.72E-30 T 11-10-2018 SYN_00182 d9fd2fcddf8a55a153956caf4534f22d 339 Gene3D G3DSA:3.20.20.70 43 326 1.3E-105 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_00182 d9fd2fcddf8a55a153956caf4534f22d 339 Pfam PF13394 4Fe-4S single cluster domain 109 176 4.9E-5 T 11-10-2018 SYN_00182 d9fd2fcddf8a55a153956caf4534f22d 339 TIGRFAM TIGR00238 TIGR00238: KamA family protein 2 320 1.5E-92 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase SYN_02066 9f346d651ba2b4fc153a7151363fa902 357 Pfam PF13437 HlyD family secretion protein 216 321 6.0E-14 T 11-10-2018 SYN_02066 9f346d651ba2b4fc153a7151363fa902 357 Gene3D G3DSA:2.40.50.100 48 81 8.3E-14 T 11-10-2018 SYN_02066 9f346d651ba2b4fc153a7151363fa902 357 SUPERFAMILY SSF111369 42 105 6.02E-10 T 11-10-2018 SYN_02066 9f346d651ba2b4fc153a7151363fa902 357 Gene3D G3DSA:2.40.50.100 193 241 4.5E-5 T 11-10-2018 SYN_02066 9f346d651ba2b4fc153a7151363fa902 357 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 60 80 3.7E-5 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SYN_02066 9f346d651ba2b4fc153a7151363fa902 357 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 329 344 3.7E-5 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SYN_02066 9f346d651ba2b4fc153a7151363fa902 357 SUPERFAMILY SSF111369 173 294 1.96E-8 T 11-10-2018 SYN_02066 9f346d651ba2b4fc153a7151363fa902 357 Gene3D G3DSA:2.40.30.170 242 330 7.7E-7 T 11-10-2018 SYN_02066 9f346d651ba2b4fc153a7151363fa902 357 Gene3D G3DSA:1.10.287.470 82 115 8.3E-14 T 11-10-2018 SYN_02066 9f346d651ba2b4fc153a7151363fa902 357 Pfam PF13533 Biotin-lipoyl like 50 97 7.3E-12 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain SYN_02066 9f346d651ba2b4fc153a7151363fa902 357 Gene3D G3DSA:1.10.287.470 119 190 2.7E-5 T 11-10-2018 SYN_01212 d9b2bfdb6681fa0b89d1307d78b224c2 307 Gene3D G3DSA:3.40.718.10 3 301 2.3E-36 T 11-10-2018 SYN_01212 d9b2bfdb6681fa0b89d1307d78b224c2 307 SUPERFAMILY SSF53659 14 258 9.87E-26 T 11-10-2018 SYN_01212 d9b2bfdb6681fa0b89d1307d78b224c2 307 Pfam PF01515 Phosphate acetyl/butaryl transferase 82 178 1.2E-8 T 11-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 SYN_01630 ebd2f07ba5bfc661edcdb50aa7363f13 544 Pfam PF13484 4Fe-4S double cluster binding domain 27 95 4.1E-7 T 11-10-2018 SYN_01630 ebd2f07ba5bfc661edcdb50aa7363f13 544 Gene3D G3DSA:3.20.20.70 172 544 9.1E-74 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_01630 ebd2f07ba5bfc661edcdb50aa7363f13 544 SUPERFAMILY SSF54862 18 107 4.6E-17 T 11-10-2018 SYN_01630 ebd2f07ba5bfc661edcdb50aa7363f13 544 Pfam PF01645 Conserved region in glutamate synthase 188 514 4.4E-56 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 SYN_01630 ebd2f07ba5bfc661edcdb50aa7363f13 544 Gene3D G3DSA:3.30.70.20 21 100 2.3E-9 T 11-10-2018 SYN_01630 ebd2f07ba5bfc661edcdb50aa7363f13 544 SUPERFAMILY SSF51395 147 517 3.11E-68 T 11-10-2018 SYN_01630 ebd2f07ba5bfc661edcdb50aa7363f13 544 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 83 94 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_01630 ebd2f07ba5bfc661edcdb50aa7363f13 544 PIRSF PIRSF006429 7 544 2.5E-108 T 11-10-2018 IPR024188 Glutamate synthase large subunit-like protein SYN_02574 e851063b93b05202b5fe69b35417f5a1 179 SUPERFAMILY SSF52499 2 179 8.63E-51 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 SYN_02574 e851063b93b05202b5fe69b35417f5a1 179 Pfam PF00857 Isochorismatase family 7 156 1.4E-30 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 SYN_02574 e851063b93b05202b5fe69b35417f5a1 179 Gene3D G3DSA:3.40.50.850 1 179 1.5E-56 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 SYN_01564 10f8bfca357153e687928306622f663a 601 Gene3D G3DSA:3.40.50.300 343 595 1.6E-94 T 11-10-2018 SYN_01564 10f8bfca357153e687928306622f663a 601 Pfam PF00005 ABC transporter 367 516 4.8E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_01564 10f8bfca357153e687928306622f663a 601 SUPERFAMILY SSF90123 22 338 9.81E-87 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 SYN_01564 10f8bfca357153e687928306622f663a 601 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_01564 10f8bfca357153e687928306622f663a 601 Gene3D G3DSA:1.20.1560.10 8 338 9.5E-99 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 SYN_01564 10f8bfca357153e687928306622f663a 601 SUPERFAMILY SSF52540 341 587 6.69E-94 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01564 10f8bfca357153e687928306622f663a 601 Pfam PF00664 ABC transporter transmembrane region 37 305 3.4E-58 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 SYN_01564 10f8bfca357153e687928306622f663a 601 SMART SM00382 376 562 1.5E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01564 10f8bfca357153e687928306622f663a 601 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 20 589 2.0E-192 T 11-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 SYN_02690 7dcab15faf0f3d750c38cafd3d1863f4 690 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 36 676 8.1E-164 T 11-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH SYN_01014 6d26a73ca789791c2d53bf8d5424457e 544 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 3 544 21.519 T 11-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 SYN_01014 6d26a73ca789791c2d53bf8d5424457e 544 Gene3D G3DSA:2.70.98.90 78 342 3.8E-30 T 11-10-2018 IPR038221 YidC, periplasmic domain superfamily SYN_01014 6d26a73ca789791c2d53bf8d5424457e 544 PRINTS PR01900 YidC translocation/secretion protein signature 497 521 6.7E-24 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 SYN_01014 6d26a73ca789791c2d53bf8d5424457e 544 PRINTS PR01900 YidC translocation/secretion protein signature 349 365 6.7E-24 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 SYN_01014 6d26a73ca789791c2d53bf8d5424457e 544 PRINTS PR01900 YidC translocation/secretion protein signature 478 493 6.7E-24 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 SYN_01014 6d26a73ca789791c2d53bf8d5424457e 544 PRINTS PR00701 60kDa inner membrane protein signature 472 494 3.7E-42 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 SYN_01014 6d26a73ca789791c2d53bf8d5424457e 544 PRINTS PR00701 60kDa inner membrane protein signature 425 448 3.7E-42 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 SYN_01014 6d26a73ca789791c2d53bf8d5424457e 544 PRINTS PR00701 60kDa inner membrane protein signature 260 275 3.7E-42 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 SYN_01014 6d26a73ca789791c2d53bf8d5424457e 544 PRINTS PR00701 60kDa inner membrane protein signature 177 197 3.7E-42 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 SYN_01014 6d26a73ca789791c2d53bf8d5424457e 544 PRINTS PR00701 60kDa inner membrane protein signature 508 531 3.7E-42 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 SYN_01014 6d26a73ca789791c2d53bf8d5424457e 544 PRINTS PR00701 60kDa inner membrane protein signature 88 109 3.7E-42 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 SYN_01014 6d26a73ca789791c2d53bf8d5424457e 544 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 362 6.3E-66 T 11-10-2018 IPR028053 Membrane insertase YidC, N-terminal SYN_01014 6d26a73ca789791c2d53bf8d5424457e 544 Pfam PF14849 YidC periplasmic domain 83 350 8.9E-44 T 11-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain SYN_01014 6d26a73ca789791c2d53bf8d5424457e 544 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 363 542 5.9E-73 T 11-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01014 6d26a73ca789791c2d53bf8d5424457e 544 Pfam PF02096 60Kd inner membrane protein 364 542 1.9E-65 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 SYN_00285 7e85eac0e47336587a05c9d1b932077b 414 Gene3D G3DSA:2.40.30.170 57 336 2.1E-49 T 11-10-2018 SYN_00285 7e85eac0e47336587a05c9d1b932077b 414 Gene3D G3DSA:2.40.50.100 68 250 2.1E-49 T 11-10-2018 SYN_00285 7e85eac0e47336587a05c9d1b932077b 414 Gene3D G3DSA:2.40.420.20 55 394 2.1E-49 T 11-10-2018 SYN_00285 7e85eac0e47336587a05c9d1b932077b 414 Pfam PF13437 HlyD family secretion protein 217 313 3.4E-8 T 11-10-2018 SYN_00285 7e85eac0e47336587a05c9d1b932077b 414 Gene3D G3DSA:1.10.287.470 102 204 2.1E-49 T 11-10-2018 SYN_00285 7e85eac0e47336587a05c9d1b932077b 414 SUPERFAMILY SSF111369 58 185 4.97E-6 T 11-10-2018 SYN_00720 720ae7220a3f991e7e5eee9be2fd71fa 336 Gene3D G3DSA:3.30.70.20 32 303 5.3E-38 T 11-10-2018 SYN_00720 720ae7220a3f991e7e5eee9be2fd71fa 336 Pfam PF13247 4Fe-4S dicluster domain 123 229 6.8E-18 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_00720 720ae7220a3f991e7e5eee9be2fd71fa 336 SUPERFAMILY SSF54862 37 333 2.09E-52 T 11-10-2018 SYN_01004 f7a42914a3df78d2fb67a721bee8ea02 116 Gene3D G3DSA:3.90.1170.40 1 116 2.5E-13 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 SYN_01004 f7a42914a3df78d2fb67a721bee8ea02 116 Pfam PF02391 MoaE protein 16 108 4.6E-12 T 11-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 SYN_01004 f7a42914a3df78d2fb67a721bee8ea02 116 SUPERFAMILY SSF54690 16 110 1.57E-15 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 SYN_01527 36295a9cd9479172b85352b58f27b042 203 Gene3D G3DSA:2.10.109.10 24 130 2.3E-31 T 11-10-2018 SYN_01527 36295a9cd9479172b85352b58f27b042 203 Gene3D G3DSA:2.10.109.10 131 198 1.0E-16 T 11-10-2018 SYN_01527 36295a9cd9479172b85352b58f27b042 203 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 12 187 1.6E-53 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SYN_01527 36295a9cd9479172b85352b58f27b042 203 Pfam PF00717 Peptidase S24-like 34 115 1.1E-19 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C SYN_01527 36295a9cd9479172b85352b58f27b042 203 ProSitePatterns PS00761 Signal peptidases I signature 3. 151 164 - T 11-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 SYN_01527 36295a9cd9479172b85352b58f27b042 203 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 92 104 4.2E-21 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SYN_01527 36295a9cd9479172b85352b58f27b042 203 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 146 165 4.2E-21 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SYN_01527 36295a9cd9479172b85352b58f27b042 203 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 28 44 4.2E-21 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SYN_01527 36295a9cd9479172b85352b58f27b042 203 ProSitePatterns PS00501 Signal peptidases I serine active site. 37 44 - T 11-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 SYN_01527 36295a9cd9479172b85352b58f27b042 203 SUPERFAMILY SSF51306 26 201 2.44E-64 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily SYN_01908 d4513d5b0d759093e691c7b849f18ad6 98 ProSitePatterns PS00681 Chaperonins cpn10 signature. 5 29 - T 11-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 SYN_01908 d4513d5b0d759093e691c7b849f18ad6 98 SMART SM00883 4 96 3.6E-61 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SYN_01908 d4513d5b0d759093e691c7b849f18ad6 98 SUPERFAMILY SSF50129 2 97 1.41E-36 T 11-10-2018 IPR011032 GroES-like superfamily SYN_01908 d4513d5b0d759093e691c7b849f18ad6 98 Hamap MF_00580 10 kDa chaperonin [groS]. 4 97 27.568 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SYN_01908 d4513d5b0d759093e691c7b849f18ad6 98 Pfam PF00166 Chaperonin 10 Kd subunit 4 96 1.9E-36 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SYN_01908 d4513d5b0d759093e691c7b849f18ad6 98 PRINTS PR00297 10kDa chaperonin signature 5 20 1.3E-33 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SYN_01908 d4513d5b0d759093e691c7b849f18ad6 98 PRINTS PR00297 10kDa chaperonin signature 83 96 1.3E-33 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SYN_01908 d4513d5b0d759093e691c7b849f18ad6 98 PRINTS PR00297 10kDa chaperonin signature 62 74 1.3E-33 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SYN_01908 d4513d5b0d759093e691c7b849f18ad6 98 PRINTS PR00297 10kDa chaperonin signature 27 48 1.3E-33 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SYN_01908 d4513d5b0d759093e691c7b849f18ad6 98 Gene3D G3DSA:2.30.33.40 2 98 5.3E-42 T 11-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 SYN_02365 0b729c6a902a10b3d63f536f53dd821b 419 Gene3D G3DSA:3.40.47.10 262 406 2.9E-56 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 SYN_02365 0b729c6a902a10b3d63f536f53dd821b 419 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 9 252 2.1E-60 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal SYN_02365 0b729c6a902a10b3d63f536f53dd821b 419 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 160 176 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site SYN_02365 0b729c6a902a10b3d63f536f53dd821b 419 Gene3D G3DSA:3.40.47.10 2 260 8.8E-92 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 SYN_02365 0b729c6a902a10b3d63f536f53dd821b 419 SMART SM00825 Beta-ketoacyl synthase 11 418 3.1E-16 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SYN_02365 0b729c6a902a10b3d63f536f53dd821b 419 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 260 374 2.7E-40 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal SYN_02365 0b729c6a902a10b3d63f536f53dd821b 419 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 9 415 8.4E-189 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 SYN_02365 0b729c6a902a10b3d63f536f53dd821b 419 SUPERFAMILY SSF53901 9 257 3.12E-77 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 SYN_02365 0b729c6a902a10b3d63f536f53dd821b 419 PIRSF PIRSF000447 6 419 1.8E-177 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 SYN_02365 0b729c6a902a10b3d63f536f53dd821b 419 SUPERFAMILY SSF53901 220 416 4.25E-73 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 SYN_01056 e2448f80e9a018e3895b23e15b09fa03 367 Gene3D G3DSA:1.20.58.2180 186 360 2.8E-65 T 11-10-2018 SYN_01056 e2448f80e9a018e3895b23e15b09fa03 367 SUPERFAMILY SSF53807 48 334 1.37E-51 T 11-10-2018 SYN_01056 e2448f80e9a018e3895b23e15b09fa03 367 Gene3D G3DSA:3.40.50.1980 210 313 2.8E-65 T 11-10-2018 SYN_01056 e2448f80e9a018e3895b23e15b09fa03 367 Gene3D G3DSA:3.40.50.1980 45 180 8.4E-44 T 11-10-2018 SYN_01056 e2448f80e9a018e3895b23e15b09fa03 367 Pfam PF01497 Periplasmic binding protein 116 305 4.0E-17 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain SYN_02071 af353cb4696175696a95f08bbbdbd587 1407 SUPERFAMILY SSF52540 1161 1404 1.18E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02071 af353cb4696175696a95f08bbbdbd587 1407 Gene3D G3DSA:3.40.50.300 1166 1365 5.3E-83 T 11-10-2018 SYN_02071 af353cb4696175696a95f08bbbdbd587 1407 Gene3D G3DSA:1.20.120.850 1181 1400 5.3E-83 T 11-10-2018 SYN_02071 af353cb4696175696a95f08bbbdbd587 1407 SMART SM00490 1269 1351 2.9E-26 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_02071 af353cb4696175696a95f08bbbdbd587 1407 SUPERFAMILY SSF52540 941 1159 6.03E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02071 af353cb4696175696a95f08bbbdbd587 1407 Gene3D G3DSA:3.40.50.10810 919 1158 5.3E-65 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily SYN_02071 af353cb4696175696a95f08bbbdbd587 1407 SMART SM00487 948 1128 1.3E-31 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain SYN_02071 af353cb4696175696a95f08bbbdbd587 1407 Pfam PF00271 Helicase conserved C-terminal domain 1250 1351 2.6E-19 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_02071 af353cb4696175696a95f08bbbdbd587 1407 Pfam PF00176 SNF2 family N-terminal domain 970 1230 1.3E-58 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 SYN_02036 80b02b06a8b711579a4248b480c3382a 785 Pfam PF08487 Vault protein inter-alpha-trypsin domain 54 164 2.0E-34 T 11-10-2018 IPR013694 VIT domain SYN_02036 80b02b06a8b711579a4248b480c3382a 785 SMART SM00609 37 166 5.8E-13 T 11-10-2018 IPR013694 VIT domain SYN_02036 80b02b06a8b711579a4248b480c3382a 785 SMART SM00327 308 471 1.2E-16 T 11-10-2018 IPR002035 von Willebrand factor, type A SYN_02036 80b02b06a8b711579a4248b480c3382a 785 Pfam PF13768 von Willebrand factor type A domain 312 458 5.1E-20 T 11-10-2018 IPR002035 von Willebrand factor, type A SYN_02036 80b02b06a8b711579a4248b480c3382a 785 SUPERFAMILY SSF53300 309 463 1.95E-25 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily SYN_02036 80b02b06a8b711579a4248b480c3382a 785 Gene3D G3DSA:3.40.50.410 309 479 3.0E-28 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily SYN_02628 04cea5570d9bf4679da845af29584aa3 517 Gene3D G3DSA:3.40.50.2000 265 473 4.6E-168 T 11-10-2018 SYN_02628 04cea5570d9bf4679da845af29584aa3 517 Gene3D G3DSA:3.40.50.2000 44 484 4.6E-168 T 11-10-2018 SYN_02628 04cea5570d9bf4679da845af29584aa3 517 Pfam PF00982 Glycosyltransferase family 20 19 485 1.8E-145 T 11-10-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 KEGG: 00500+2.4.1.15 SYN_02628 04cea5570d9bf4679da845af29584aa3 517 SUPERFAMILY SSF53756 19 485 2.26E-141 T 11-10-2018 SYN_00579 139570c65975a9225f1f25f1a68834e8 550 PIRSF PIRSF038984 20 550 1.1E-188 T 11-10-2018 IPR028348 FAD dependent protein SYN_00579 139570c65975a9225f1f25f1a68834e8 550 Gene3D G3DSA:3.50.50.60 486 550 1.0E-13 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_00579 139570c65975a9225f1f25f1a68834e8 550 Gene3D G3DSA:3.50.50.60 105 320 9.3E-71 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_00579 139570c65975a9225f1f25f1a68834e8 550 Gene3D G3DSA:3.30.70.2700 13 95 2.4E-12 T 11-10-2018 SYN_00579 139570c65975a9225f1f25f1a68834e8 550 Pfam PF01494 FAD binding domain 119 147 5.4E-6 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 SYN_00579 139570c65975a9225f1f25f1a68834e8 550 SUPERFAMILY SSF51905 116 546 1.85E-32 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_00267 4bd1f739e8e4ce804c1ca3c3820b9ed1 676 Gene3D G3DSA:2.170.190.11 84 172 1.1E-82 T 11-10-2018 SYN_00267 4bd1f739e8e4ce804c1ca3c3820b9ed1 676 Gene3D G3DSA:2.40.340.10 364 439 9.4E-20 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_00267 4bd1f739e8e4ce804c1ca3c3820b9ed1 676 Pfam PF12727 PBP superfamily domain 466 649 8.3E-65 T 11-10-2018 IPR024370 PBP domain SYN_00267 4bd1f739e8e4ce804c1ca3c3820b9ed1 676 SMART SM00852 211 354 2.4E-34 T 11-10-2018 IPR001453 MoaB/Mog domain SYN_00267 4bd1f739e8e4ce804c1ca3c3820b9ed1 676 Pfam PF00994 Probable molybdopterin binding domain 211 354 1.9E-22 T 11-10-2018 IPR001453 MoaB/Mog domain SYN_00267 4bd1f739e8e4ce804c1ca3c3820b9ed1 676 Pfam PF03454 MoeA C-terminal region (domain IV) 367 436 3.7E-11 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_00267 4bd1f739e8e4ce804c1ca3c3820b9ed1 676 SUPERFAMILY SSF63867 364 438 4.19E-15 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_00267 4bd1f739e8e4ce804c1ca3c3820b9ed1 676 SUPERFAMILY SSF63882 39 206 2.75E-40 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_00267 4bd1f739e8e4ce804c1ca3c3820b9ed1 676 SUPERFAMILY SSF53218 206 359 1.7E-33 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily SYN_00267 4bd1f739e8e4ce804c1ca3c3820b9ed1 676 Gene3D G3DSA:3.90.105.10 61 205 1.1E-82 T 11-10-2018 SYN_00267 4bd1f739e8e4ce804c1ca3c3820b9ed1 676 Gene3D G3DSA:3.40.980.10 206 352 1.1E-82 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily SYN_00267 4bd1f739e8e4ce804c1ca3c3820b9ed1 676 Gene3D G3DSA:3.40.190.10 528 626 8.5E-8 T 11-10-2018 SYN_00267 4bd1f739e8e4ce804c1ca3c3820b9ed1 676 SUPERFAMILY SSF53850 452 658 2.44E-14 T 11-10-2018 SYN_00267 4bd1f739e8e4ce804c1ca3c3820b9ed1 676 Pfam PF03453 MoeA N-terminal region (domain I and II) 38 198 3.0E-34 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_00383 4894767ae4cb058f0e9d61727151b63d 840 Pfam PF09369 Domain of unknown function (DUF1998) 702 812 3.6E-13 T 11-10-2018 IPR018973 DEAD/DEAH-box helicase, putative SYN_00383 4894767ae4cb058f0e9d61727151b63d 840 Pfam PF00270 DEAD/DEAH box helicase 102 271 4.0E-30 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SYN_00383 4894767ae4cb058f0e9d61727151b63d 840 Pfam PF00271 Helicase conserved C-terminal domain 328 437 2.5E-9 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_00383 4894767ae4cb058f0e9d61727151b63d 840 Gene3D G3DSA:3.40.50.300 78 288 6.1E-48 T 11-10-2018 SYN_00383 4894767ae4cb058f0e9d61727151b63d 840 Gene3D G3DSA:3.40.50.300 317 473 2.9E-18 T 11-10-2018 SYN_00383 4894767ae4cb058f0e9d61727151b63d 840 SUPERFAMILY SSF52540 109 441 1.05E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00383 4894767ae4cb058f0e9d61727151b63d 840 SMART SM00490 347 438 5.1E-10 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_00383 4894767ae4cb058f0e9d61727151b63d 840 SMART SM00487 96 301 2.0E-35 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain SYN_02490 cec189b060dcb508214c2ef17b1604a9 332 Pfam PF01636 Phosphotransferase enzyme family 41 256 1.0E-9 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase SYN_02490 cec189b060dcb508214c2ef17b1604a9 332 SUPERFAMILY SSF56112 41 308 9.29E-21 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily SYN_02490 cec189b060dcb508214c2ef17b1604a9 332 Gene3D G3DSA:3.90.1200.10 133 291 3.2E-8 T 11-10-2018 SYN_01339 d1c7ed28de6fad07ec514ae9f3984ea5 118 Gene3D G3DSA:3.30.460.10 1 100 9.3E-37 T 11-10-2018 SYN_01339 d1c7ed28de6fad07ec514ae9f3984ea5 118 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 2 96 5.7E-34 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SYN_01339 d1c7ed28de6fad07ec514ae9f3984ea5 118 Pfam PF02410 Ribosomal silencing factor during starvation 3 96 2.0E-23 T 11-10-2018 SYN_01339 d1c7ed28de6fad07ec514ae9f3984ea5 118 SUPERFAMILY SSF81301 2 106 1.5E-37 T 11-10-2018 SYN_01339 d1c7ed28de6fad07ec514ae9f3984ea5 118 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 1 97 21.964 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SYN_00979 40b75df6f34cbc25ee82f919d748cebd 409 Gene3D G3DSA:3.40.50.720 43 391 5.0E-134 T 11-10-2018 SYN_00979 40b75df6f34cbc25ee82f919d748cebd 409 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 41 405 1.7E-161 T 11-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 SYN_00979 40b75df6f34cbc25ee82f919d748cebd 409 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 182 391 3.0E-79 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain SYN_00979 40b75df6f34cbc25ee82f919d748cebd 409 SMART SM01002 189 337 7.8E-85 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain SYN_00979 40b75df6f34cbc25ee82f919d748cebd 409 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 44 177 1.6E-42 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal SYN_00979 40b75df6f34cbc25ee82f919d748cebd 409 SUPERFAMILY SSF51735 177 343 3.63E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_00979 40b75df6f34cbc25ee82f919d748cebd 409 SUPERFAMILY SSF52283 41 400 3.15E-62 T 11-10-2018 SYN_00979 40b75df6f34cbc25ee82f919d748cebd 409 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 213 238 - T 11-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 SYN_00979 40b75df6f34cbc25ee82f919d748cebd 409 Gene3D G3DSA:3.40.50.720 170 345 5.0E-134 T 11-10-2018 SYN_00979 40b75df6f34cbc25ee82f919d748cebd 409 PIRSF PIRSF000183 41 408 1.9E-161 T 11-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 SYN_00979 40b75df6f34cbc25ee82f919d748cebd 409 SMART SM01003 44 177 2.9E-72 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal SYN_01179 f14a6d2d3613ce9b08771cd05a6fc0af 120 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 14 104 9.2E-19 T 11-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis SYN_01179 f14a6d2d3613ce9b08771cd05a6fc0af 120 Gene3D G3DSA:3.30.420.130 1 115 2.2E-30 T 11-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily SYN_01179 f14a6d2d3613ce9b08771cd05a6fc0af 120 SUPERFAMILY SSF53146 2 119 4.84E-28 T 11-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily SYN_00152 11d1ae23111561dc57c68e0833f2a0d7 637 SUPERFAMILY SSF142984 392 475 1.11E-25 T 11-10-2018 SYN_00152 11d1ae23111561dc57c68e0833f2a0d7 637 SUPERFAMILY SSF52833 25 106 5.03E-6 T 11-10-2018 IPR036249 Thioredoxin-like superfamily SYN_00152 11d1ae23111561dc57c68e0833f2a0d7 637 Gene3D G3DSA:1.20.1440.230 478 578 6.2E-34 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00152 11d1ae23111561dc57c68e0833f2a0d7 637 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 589 600 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_00152 11d1ae23111561dc57c68e0833f2a0d7 637 SMART SM00928 480 525 1.5E-22 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00152 11d1ae23111561dc57c68e0833f2a0d7 637 SUPERFAMILY SSF54862 576 636 5.03E-15 T 11-10-2018 SYN_00152 11d1ae23111561dc57c68e0833f2a0d7 637 SUPERFAMILY SSF142019 150 391 1.22E-89 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00152 11d1ae23111561dc57c68e0833f2a0d7 637 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 199 370 1.4E-48 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00152 11d1ae23111561dc57c68e0833f2a0d7 637 Gene3D G3DSA:3.40.50.11540 204 382 4.9E-79 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00152 11d1ae23111561dc57c68e0833f2a0d7 637 Gene3D G3DSA:3.10.20.600 383 477 2.4E-33 T 11-10-2018 SYN_00152 11d1ae23111561dc57c68e0833f2a0d7 637 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 481 565 2.0E-32 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00152 11d1ae23111561dc57c68e0833f2a0d7 637 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 493 504 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00152 11d1ae23111561dc57c68e0833f2a0d7 637 SUPERFAMILY SSF140490 477 578 1.83E-37 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00152 11d1ae23111561dc57c68e0833f2a0d7 637 Gene3D G3DSA:3.30.70.20 582 636 9.6E-15 T 11-10-2018 SYN_00152 11d1ae23111561dc57c68e0833f2a0d7 637 Pfam PF10531 SLBB domain 394 442 5.7E-7 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00152 11d1ae23111561dc57c68e0833f2a0d7 637 Pfam PF00037 4Fe-4S binding domain 583 605 3.4E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_00152 11d1ae23111561dc57c68e0833f2a0d7 637 Pfam PF00037 4Fe-4S binding domain 613 635 1.5E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_01481 313ba35faeac5ef7e9451056fbe741dc 749 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 491 669 2.6E-37 T 11-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 SYN_01481 313ba35faeac5ef7e9451056fbe741dc 749 SMART SM00044 456 662 5.6E-26 T 11-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 SYN_01481 313ba35faeac5ef7e9451056fbe741dc 749 SUPERFAMILY SSF48452 553 728 8.54E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_01481 313ba35faeac5ef7e9451056fbe741dc 749 Pfam PF05226 CHASE2 domain 25 390 1.1E-68 T 11-10-2018 IPR007890 CHASE2 SYN_01481 313ba35faeac5ef7e9451056fbe741dc 749 SUPERFAMILY SSF55073 486 675 2.51E-64 T 11-10-2018 IPR029787 Nucleotide cyclase SYN_01481 313ba35faeac5ef7e9451056fbe741dc 749 SMART SM01080 35 392 2.2E-92 T 11-10-2018 IPR007890 CHASE2 SYN_01481 313ba35faeac5ef7e9451056fbe741dc 749 Gene3D G3DSA:3.30.70.1230 480 684 2.9E-75 T 11-10-2018 IPR029787 Nucleotide cyclase SYN_00870 97216c2c35cb23e993f4980f127c258a 287 Pfam PF08282 haloacid dehalogenase-like hydrolase 18 83 2.2E-6 T 11-10-2018 SYN_00870 97216c2c35cb23e993f4980f127c258a 287 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 17 242 8.3E-13 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 SYN_00870 97216c2c35cb23e993f4980f127c258a 287 Gene3D G3DSA:3.40.50.1000 17 270 1.1E-74 T 11-10-2018 IPR023214 HAD superfamily SYN_00870 97216c2c35cb23e993f4980f127c258a 287 SUPERFAMILY SSF56784 14 247 2.52E-35 T 11-10-2018 IPR036412 HAD-like superfamily SYN_00870 97216c2c35cb23e993f4980f127c258a 287 Gene3D G3DSA:3.30.980.20 111 197 1.1E-74 T 11-10-2018 SYN_00870 97216c2c35cb23e993f4980f127c258a 287 TIGRFAM TIGR01486 HAD-SF-IIB-MPGP: mannosyl-3-phosphoglycerate phosphatase family 17 278 6.9E-69 T 11-10-2018 IPR006381 HAD-superfamily hydrolase, superfamily IIB, MPGP GO:0005737|GO:0050531|GO:0051479 KEGG: 00051+3.1.3.70|MetaCyc: PWY-5656 SYN_00539 5553ebf60506fbd4e75df0afab2971e3 184 Gene3D G3DSA:3.90.79.10 3 182 4.9E-44 T 11-10-2018 SYN_00539 5553ebf60506fbd4e75df0afab2971e3 184 SUPERFAMILY SSF55811 5 178 2.17E-40 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 SYN_00539 5553ebf60506fbd4e75df0afab2971e3 184 Pfam PF00293 NUDIX domain 47 158 1.0E-14 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 SYN_00294 bfed68eb6e30f9a9311efa3f14daffad 276 Hamap MF_00188 Protease HtpX [htpX]. 3 270 29.187 T 11-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 SYN_00294 bfed68eb6e30f9a9311efa3f14daffad 276 Gene3D G3DSA:3.30.2010.10 57 148 5.9E-31 T 11-10-2018 SYN_00294 bfed68eb6e30f9a9311efa3f14daffad 276 Pfam PF01435 Peptidase family M48 64 270 5.7E-42 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SYN_00934 ecbf1d975de78f3116519272c4c63aec 637 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 292 445 2.8E-62 T 11-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain SYN_00934 ecbf1d975de78f3116519272c4c63aec 637 SUPERFAMILY SSF100950 212 475 4.54E-64 T 11-10-2018 IPR037171 NagB/RpiA transferase-like SYN_00934 ecbf1d975de78f3116519272c4c63aec 637 Pfam PF00583 Acetyltransferase (GNAT) family 518 618 3.4E-9 T 11-10-2018 IPR000182 GNAT domain SYN_00934 ecbf1d975de78f3116519272c4c63aec 637 Gene3D G3DSA:3.40.1080.10 14 204 3.8E-62 T 11-10-2018 SYN_00934 ecbf1d975de78f3116519272c4c63aec 637 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 22 202 1.0E-44 T 11-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 SYN_00934 ecbf1d975de78f3116519272c4c63aec 637 Gene3D G3DSA:3.40.630.30 473 637 7.3E-31 T 11-10-2018 SYN_00934 ecbf1d975de78f3116519272c4c63aec 637 SUPERFAMILY SSF100950 19 242 1.12E-39 T 11-10-2018 IPR037171 NagB/RpiA transferase-like SYN_00934 ecbf1d975de78f3116519272c4c63aec 637 Gene3D G3DSA:3.30.750.70 207 308 1.9E-35 T 11-10-2018 SYN_00934 ecbf1d975de78f3116519272c4c63aec 637 SUPERFAMILY SSF55729 482 629 4.79E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase SYN_00934 ecbf1d975de78f3116519272c4c63aec 637 Gene3D G3DSA:3.40.1080.20 310 458 1.5E-61 T 11-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily SYN_00442 1aed95b3671805df1ddf19d537ca5f74 229 SUPERFAMILY SSF51391 18 219 1.1E-52 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SYN_00442 1aed95b3671805df1ddf19d537ca5f74 229 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 22 214 3.4E-53 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SYN_00442 1aed95b3671805df1ddf19d537ca5f74 229 Pfam PF02581 Thiamine monophosphate synthase 23 204 4.5E-49 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SYN_00442 1aed95b3671805df1ddf19d537ca5f74 229 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 21 222 22.536 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SYN_00442 1aed95b3671805df1ddf19d537ca5f74 229 Gene3D G3DSA:3.20.20.70 13 223 1.8E-58 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_01486 fa19013be0e3a790bc50349e8e24076a 275 Gene3D G3DSA:3.30.70.1070 65 135 3.1E-14 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 SYN_01486 fa19013be0e3a790bc50349e8e24076a 275 SUPERFAMILY SSF54001 151 274 2.7E-44 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily SYN_01486 fa19013be0e3a790bc50349e8e24076a 275 Pfam PF05036 Sporulation related domain 65 127 3.5E-13 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 SYN_01486 fa19013be0e3a790bc50349e8e24076a 275 Gene3D G3DSA:3.90.1720.10 145 275 5.9E-44 T 11-10-2018 SYN_01486 fa19013be0e3a790bc50349e8e24076a 275 Pfam PF00877 NlpC/P60 family 166 271 3.9E-28 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain SYN_01486 fa19013be0e3a790bc50349e8e24076a 275 SUPERFAMILY SSF110997 64 128 3.53E-14 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 SYN_00775 51e4768738268fb05724a647068c5b32 215 Pfam PF00072 Response regulator receiver domain 5 117 3.1E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00775 51e4768738268fb05724a647068c5b32 215 Gene3D G3DSA:3.40.50.12740 3 213 3.0E-66 T 11-10-2018 SYN_00775 51e4768738268fb05724a647068c5b32 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 207 3.1E-20 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_00775 51e4768738268fb05724a647068c5b32 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 2.2E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_00775 51e4768738268fb05724a647068c5b32 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 2.2E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_00775 51e4768738268fb05724a647068c5b32 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 2.2E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_00775 51e4768738268fb05724a647068c5b32 215 SMART SM00421 150 207 3.6E-24 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_00775 51e4768738268fb05724a647068c5b32 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_00775 51e4768738268fb05724a647068c5b32 215 SMART SM00448 3 116 3.1E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00775 51e4768738268fb05724a647068c5b32 215 SUPERFAMILY SSF52172 3 134 4.41E-33 T 11-10-2018 IPR011006 CheY-like superfamily SYN_00775 51e4768738268fb05724a647068c5b32 215 SUPERFAMILY SSF46894 146 213 4.42E-22 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SYN_02533 e364dca961752177d7d3e7db1078cea3 831 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 125 804 3.0E-86 T 11-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 SYN_02533 e364dca961752177d7d3e7db1078cea3 831 SUPERFAMILY SSF56281 561 817 1.97E-49 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_02533 e364dca961752177d7d3e7db1078cea3 831 Gene3D G3DSA:3.60.15.10 560 818 4.4E-63 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_02533 e364dca961752177d7d3e7db1078cea3 831 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 249 448 3.4E-24 T 11-10-2018 IPR004477 ComEC/Rec2-related protein SYN_02533 e364dca961752177d7d3e7db1078cea3 831 Pfam PF03772 Competence protein 228 516 9.0E-67 T 11-10-2018 IPR004477 ComEC/Rec2-related protein SYN_02533 e364dca961752177d7d3e7db1078cea3 831 SMART SM00849 572 750 6.8E-9 T 11-10-2018 IPR001279 Metallo-beta-lactamase SYN_02533 e364dca961752177d7d3e7db1078cea3 831 Pfam PF13567 Domain of unknown function (DUF4131) 23 186 2.8E-28 T 11-10-2018 IPR025405 Domain of unknown function DUF4131 SYN_02533 e364dca961752177d7d3e7db1078cea3 831 Pfam PF00753 Metallo-beta-lactamase superfamily 570 673 1.4E-12 T 11-10-2018 IPR001279 Metallo-beta-lactamase SYN_01590 4d869461cba08bce076bec34cef4723e 179 Gene3D G3DSA:3.90.930.12 83 179 1.6E-37 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_01590 4d869461cba08bce076bec34cef4723e 179 SUPERFAMILY SSF56053 83 176 1.15E-32 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_01590 4d869461cba08bce076bec34cef4723e 179 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 3.4E-70 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SYN_01590 4d869461cba08bce076bec34cef4723e 179 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 11-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_01590 4d869461cba08bce076bec34cef4723e 179 Pfam PF00347 Ribosomal protein L6 90 164 1.3E-16 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_01590 4d869461cba08bce076bec34cef4723e 179 Pfam PF00347 Ribosomal protein L6 12 82 2.6E-14 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_01590 4d869461cba08bce076bec34cef4723e 179 SUPERFAMILY SSF56053 1 82 2.88E-23 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_01590 4d869461cba08bce076bec34cef4723e 179 Gene3D G3DSA:3.90.930.12 1 82 7.0E-29 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_01590 4d869461cba08bce076bec34cef4723e 179 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.209 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SYN_01590 4d869461cba08bce076bec34cef4723e 179 PIRSF PIRSF002162 1 177 5.9E-50 T 11-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_01590 4d869461cba08bce076bec34cef4723e 179 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.7E-30 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SYN_01590 4d869461cba08bce076bec34cef4723e 179 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.7E-30 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SYN_01590 4d869461cba08bce076bec34cef4723e 179 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.7E-30 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SYN_01243 4ef0049b3e521ec84d5b83792e8fbfc4 1070 Gene3D G3DSA:3.30.470.20 614 714 2.6E-5 T 11-10-2018 SYN_01243 4ef0049b3e521ec84d5b83792e8fbfc4 1070 Gene3D G3DSA:3.30.1490.20 345 525 1.7E-17 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 SYN_01243 4ef0049b3e521ec84d5b83792e8fbfc4 1070 Gene3D G3DSA:3.30.460.10 957 1054 1.3E-6 T 11-10-2018 SYN_01243 4ef0049b3e521ec84d5b83792e8fbfc4 1070 SUPERFAMILY SSF56059 345 720 1.29E-35 T 11-10-2018 SYN_01243 4ef0049b3e521ec84d5b83792e8fbfc4 1070 Pfam PF01909 Nucleotidyltransferase domain 969 1004 1.5E-6 T 11-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 SYN_01243 4ef0049b3e521ec84d5b83792e8fbfc4 1070 SUPERFAMILY SSF81301 968 1031 2.11E-9 T 11-10-2018 SYN_01243 4ef0049b3e521ec84d5b83792e8fbfc4 1070 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 348 731 2.2E-60 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 SYN_01387 7ade94ce1de15f02b9a7fad898f53734 552 Gene3D G3DSA:3.30.420.10 183 341 8.5E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 SYN_01387 7ade94ce1de15f02b9a7fad898f53734 552 Pfam PF00665 Integrase core domain 184 292 9.9E-8 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 SYN_01387 7ade94ce1de15f02b9a7fad898f53734 552 ProDom PD043187 TRANSPOSASE PLASMID CATALYTIC INTEGRASE DNA-BINDING DNA TRANSPOSITION RECOMBINATION FOR INSERTION 449 515 3.0E-9 T 11-10-2018 SYN_01387 7ade94ce1de15f02b9a7fad898f53734 552 SUPERFAMILY SSF53098 185 323 7.02E-15 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily SYN_00772 95d5b7795e41403dd35228867509c1d1 127 SUPERFAMILY SSF52980 14 111 6.76E-25 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 SYN_00772 95d5b7795e41403dd35228867509c1d1 127 Gene3D G3DSA:3.40.1350.10 15 126 1.5E-33 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 SYN_00772 95d5b7795e41403dd35228867509c1d1 127 Hamap MF_00048 UPF0102 protein YraN [yraN]. 8 118 23.58 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 SYN_00772 95d5b7795e41403dd35228867509c1d1 127 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 10 122 5.5E-27 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 SYN_00772 95d5b7795e41403dd35228867509c1d1 127 Pfam PF02021 Uncharacterised protein family UPF0102 15 105 5.3E-30 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 SYN_02409 3cff0c0b42b3005f391d4d15c64c967d 366 Gene3D G3DSA:3.20.20.70 104 294 5.0E-6 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_02409 3cff0c0b42b3005f391d4d15c64c967d 366 TIGRFAM TIGR04119 CXXX_matur: CXXX repeat peptide maturase 116 325 7.2E-84 T 11-10-2018 IPR026401 CXXX repeat peptide maturase SYN_02805 8397677018c758fc00df22d19fb48c5b 1035 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 13 115 2.1E-18 T 11-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 SYN_02805 8397677018c758fc00df22d19fb48c5b 1035 Pfam PF07196 Flagellin hook IN motif 144 191 9.7E-8 T 11-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 SYN_02805 8397677018c758fc00df22d19fb48c5b 1035 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 478 1018 4.3E-43 T 11-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 SYN_02670 6291db3452903ff2d19a0c5218413bcf 637 Pfam PF13727 CoA-binding domain 73 255 2.4E-9 T 11-10-2018 SYN_02670 6291db3452903ff2d19a0c5218413bcf 637 SUPERFAMILY SSF51735 298 568 2.96E-60 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_02670 6291db3452903ff2d19a0c5218413bcf 637 Pfam PF02719 Polysaccharide biosynthesis protein 300 592 3.0E-115 T 11-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain SYN_02670 6291db3452903ff2d19a0c5218413bcf 637 Gene3D G3DSA:3.40.50.720 155 281 4.2E-30 T 11-10-2018 SYN_02670 6291db3452903ff2d19a0c5218413bcf 637 Gene3D G3DSA:3.40.50.720 295 626 1.6E-114 T 11-10-2018 SYN_02670 6291db3452903ff2d19a0c5218413bcf 637 SUPERFAMILY SSF51735 157 287 1.22E-11 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_00747 f85ba9ac68562ab06a0ee6434f7d3fa7 373 SUPERFAMILY SSF159245 31 365 4.45E-97 T 11-10-2018 SYN_00747 f85ba9ac68562ab06a0ee6434f7d3fa7 373 Pfam PF07143 CrtC N-terminal lipocalin domain 54 227 4.1E-53 T 11-10-2018 IPR010791 AttH domain SYN_00747 f85ba9ac68562ab06a0ee6434f7d3fa7 373 Gene3D G3DSA:2.40.370.10 231 370 3.6E-42 T 11-10-2018 IPR023374 AttH-like domain superfamily SYN_00747 f85ba9ac68562ab06a0ee6434f7d3fa7 373 Pfam PF17186 Lipocalin-like domain 230 365 3.1E-40 T 11-10-2018 SYN_00747 f85ba9ac68562ab06a0ee6434f7d3fa7 373 Gene3D G3DSA:2.40.370.10 42 230 1.4E-65 T 11-10-2018 IPR023374 AttH-like domain superfamily SYN_00338 4250a40c78064137264cc555e24ec350 81 PIRSF PIRSF037031 1 77 6.4E-32 T 11-10-2018 IPR005243 Redox-active disulphide protein 2 SYN_00338 4250a40c78064137264cc555e24ec350 81 Pfam PF13192 Thioredoxin domain 1 76 3.9E-28 T 11-10-2018 IPR012336 Thioredoxin-like fold SYN_00338 4250a40c78064137264cc555e24ec350 81 TIGRFAM TIGR00412 redox_disulf_2: redox-active disulfide protein 2 1 76 1.5E-28 T 11-10-2018 IPR005243 Redox-active disulphide protein 2 SYN_00338 4250a40c78064137264cc555e24ec350 81 Gene3D G3DSA:3.40.30.10 1 75 2.9E-30 T 11-10-2018 SYN_00338 4250a40c78064137264cc555e24ec350 81 SUPERFAMILY SSF52833 1 76 1.1E-18 T 11-10-2018 IPR036249 Thioredoxin-like superfamily SYN_00788 c9a02b31716c5fd0031bfc1697479997 300 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 284 2.6E-47 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 SYN_00761 a17b55a14d8e0fbae2ae1c4005adc04b 242 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 238 37.009 T 11-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 SYN_00761 a17b55a14d8e0fbae2ae1c4005adc04b 242 Pfam PF00977 Histidine biosynthesis protein 3 230 2.0E-79 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 SYN_00761 a17b55a14d8e0fbae2ae1c4005adc04b 242 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 235 2.9E-82 T 11-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 SYN_00761 a17b55a14d8e0fbae2ae1c4005adc04b 242 Gene3D G3DSA:3.20.20.70 2 242 7.0E-89 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_00761 a17b55a14d8e0fbae2ae1c4005adc04b 242 SUPERFAMILY SSF51366 2 237 2.59E-73 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 SYN_02528 395ffeb303421eadd3a56d2634584be8 408 Pfam PF04055 Radical SAM superfamily 67 208 5.9E-21 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_02528 395ffeb303421eadd3a56d2634584be8 408 Pfam PF13353 4Fe-4S single cluster domain 70 156 1.3E-9 T 11-10-2018 SYN_02528 395ffeb303421eadd3a56d2634584be8 408 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 308 395 2.2E-12 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain SYN_02528 395ffeb303421eadd3a56d2634584be8 408 Gene3D G3DSA:3.20.20.70 63 358 1.3E-53 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_02528 395ffeb303421eadd3a56d2634584be8 408 SUPERFAMILY SSF102114 61 376 1.27E-67 T 11-10-2018 SYN_02528 395ffeb303421eadd3a56d2634584be8 408 PIRSF PIRSF037420 59 408 9.6E-88 T 11-10-2018 IPR017200 Coenzyme PQQ synthesis protein E SYN_02528 395ffeb303421eadd3a56d2634584be8 408 Pfam PF13186 Iron-sulfur cluster-binding domain 308 368 5.5E-7 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain SYN_00234 fd85fcfc07b39483eb142f5523f73de5 362 Gene3D G3DSA:3.40.50.720 20 348 4.7E-133 T 11-10-2018 SYN_00234 fd85fcfc07b39483eb142f5523f73de5 362 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 19 356 44.069 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 SYN_00234 fd85fcfc07b39483eb142f5523f73de5 362 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 177 333 9.5E-21 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 SYN_00234 fd85fcfc07b39483eb142f5523f73de5 362 SUPERFAMILY SSF55347 166 330 1.02E-57 T 11-10-2018 SYN_00234 fd85fcfc07b39483eb142f5523f73de5 362 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 19 362 7.9E-136 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 SYN_00234 fd85fcfc07b39483eb142f5523f73de5 362 SMART SM00859 20 158 3.2E-50 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SYN_00234 fd85fcfc07b39483eb142f5523f73de5 362 Gene3D G3DSA:3.30.360.10 164 330 4.7E-133 T 11-10-2018 SYN_00234 fd85fcfc07b39483eb142f5523f73de5 362 SUPERFAMILY SSF51735 18 194 6.4E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_00234 fd85fcfc07b39483eb142f5523f73de5 362 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 20 157 4.8E-32 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SYN_02081 61edbe9c1a90858b3f7002614b34486f 279 Pfam PF01515 Phosphate acetyl/butaryl transferase 62 253 3.8E-24 T 11-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 SYN_02081 61edbe9c1a90858b3f7002614b34486f 279 PIRSF PIRSF000428 1 62 0.013 T 11-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 SYN_02081 61edbe9c1a90858b3f7002614b34486f 279 PIRSF PIRSF000428 52 277 1.0E-36 T 11-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 SYN_02081 61edbe9c1a90858b3f7002614b34486f 279 Gene3D G3DSA:3.40.718.10 2 274 6.7E-57 T 11-10-2018 SYN_02081 61edbe9c1a90858b3f7002614b34486f 279 SUPERFAMILY SSF53659 5 273 2.16E-32 T 11-10-2018 SYN_02172 c4d872631b517f396080035af41aea7f 338 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 249 336 4.8E-22 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SYN_02172 c4d872631b517f396080035af41aea7f 338 SUPERFAMILY SSF52540 22 271 3.59E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02172 c4d872631b517f396080035af41aea7f 338 Gene3D G3DSA:3.40.50.300 19 338 3.9E-93 T 11-10-2018 SYN_02172 c4d872631b517f396080035af41aea7f 338 SMART SM00382 57 249 2.0E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_02172 c4d872631b517f396080035af41aea7f 338 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 251 316 3.8E-14 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SYN_02172 c4d872631b517f396080035af41aea7f 338 Pfam PF00005 ABC transporter 48 199 2.1E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_02172 c4d872631b517f396080035af41aea7f 338 ProSitePatterns PS00211 ABC transporters family signature. 172 186 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_00376 b688b02e770ab670d907dc454dbd7297 248 Pfam PF00535 Glycosyl transferase family 2 13 131 4.5E-13 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 SYN_00376 b688b02e770ab670d907dc454dbd7297 248 SUPERFAMILY SSF53448 10 217 8.63E-31 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_00376 b688b02e770ab670d907dc454dbd7297 248 Gene3D G3DSA:3.90.550.10 6 208 1.6E-24 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_00376 b688b02e770ab670d907dc454dbd7297 248 TIGRFAM TIGR04283 glyco_like_mftF: transferase 2, rSAM/selenodomain-associated 13 237 1.1E-70 T 11-10-2018 IPR026461 Transferase 2, rSAM/selenodomain-associated SYN_02197 7ff3082424478341d894ba9b11344073 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 164 266 1.7E-40 T 11-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 SYN_02197 7ff3082424478341d894ba9b11344073 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 246 - T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 SYN_02197 7ff3082424478341d894ba9b11344073 272 PIRSF PIRSF000193 4 270 2.0E-81 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 SYN_02197 7ff3082424478341d894ba9b11344073 272 SUPERFAMILY SSF48179 163 268 1.29E-37 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 SYN_02197 7ff3082424478341d894ba9b11344073 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 5 268 28.706 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 SYN_02197 7ff3082424478341d894ba9b11344073 272 SUPERFAMILY SSF51735 6 161 1.04E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_02197 7ff3082424478341d894ba9b11344073 272 Gene3D G3DSA:1.10.3730.10 167 269 5.3E-41 T 11-10-2018 SYN_02197 7ff3082424478341d894ba9b11344073 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 101 6.1E-18 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal SYN_02197 7ff3082424478341d894ba9b11344073 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 7 267 1.9E-88 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 SYN_02197 7ff3082424478341d894ba9b11344073 272 Gene3D G3DSA:3.40.50.720 1 166 2.6E-49 T 11-10-2018 SYN_03210 00ad9ff3f8401fd09e2f21cd5b78b93f 206 Pfam PF13358 DDE superfamily endonuclease 18 168 1.1E-26 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain SYN_01318 00ad9ff3f8401fd09e2f21cd5b78b93f 206 Pfam PF13358 DDE superfamily endonuclease 18 168 1.1E-26 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain SYN_03179 00ad9ff3f8401fd09e2f21cd5b78b93f 206 Pfam PF13358 DDE superfamily endonuclease 18 168 1.1E-26 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain SYN_02905 fbe17d61a21dc583e2a0fe15349738cd 442 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 112 440 1.1E-48 T 11-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 SYN_02905 fbe17d61a21dc583e2a0fe15349738cd 442 Pfam PF08486 Stage II sporulation protein 109 222 2.2E-28 T 11-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal SYN_01240 f90f2093b3262bb160c332b4076b0c9b 372 Gene3D G3DSA:3.20.20.70 93 320 1.6E-34 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_01240 f90f2093b3262bb160c332b4076b0c9b 372 PIRSF PIRSF004869 27 347 7.3E-103 T 11-10-2018 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted SYN_01240 f90f2093b3262bb160c332b4076b0c9b 372 SUPERFAMILY SSF102114 75 349 9.16E-38 T 11-10-2018 SYN_01240 f90f2093b3262bb160c332b4076b0c9b 372 Pfam PF04055 Radical SAM superfamily 113 268 3.3E-21 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_01240 f90f2093b3262bb160c332b4076b0c9b 372 Pfam PF13353 4Fe-4S single cluster domain 106 203 3.9E-5 T 11-10-2018 SYN_01240 f90f2093b3262bb160c332b4076b0c9b 372 TIGRFAM TIGR04337 AmmeMemoSam_rS: AmmeMemoRadiSam system radical SAM enzyme 43 369 4.8E-105 T 11-10-2018 IPR027596 AmmeMemoRadiSam system radical SAM enzyme SYN_01439 8c173da47209fd42341687266225d62d 324 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 141 161 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 SYN_01439 8c173da47209fd42341687266225d62d 324 Gene3D G3DSA:3.50.50.60 13 308 3.3E-110 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_01439 8c173da47209fd42341687266225d62d 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 149 173 3.2E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SYN_01439 8c173da47209fd42341687266225d62d 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 201 217 3.2E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SYN_01439 8c173da47209fd42341687266225d62d 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 274 292 3.2E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SYN_01439 8c173da47209fd42341687266225d62d 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 12 34 3.2E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SYN_01439 8c173da47209fd42341687266225d62d 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 240 261 3.2E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SYN_01439 8c173da47209fd42341687266225d62d 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 45 60 3.2E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SYN_01439 8c173da47209fd42341687266225d62d 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 66 76 3.2E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SYN_01439 8c173da47209fd42341687266225d62d 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 134 146 3.2E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SYN_01439 8c173da47209fd42341687266225d62d 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 112 120 3.2E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SYN_01439 8c173da47209fd42341687266225d62d 324 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 13 32 1.6E-36 T 11-10-2018 SYN_01439 8c173da47209fd42341687266225d62d 324 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 1.6E-36 T 11-10-2018 SYN_01439 8c173da47209fd42341687266225d62d 324 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 286 1.6E-36 T 11-10-2018 SYN_01439 8c173da47209fd42341687266225d62d 324 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 1.6E-36 T 11-10-2018 SYN_01439 8c173da47209fd42341687266225d62d 324 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 238 254 1.6E-36 T 11-10-2018 SYN_01439 8c173da47209fd42341687266225d62d 324 Gene3D G3DSA:3.50.50.60 128 251 3.3E-110 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_01439 8c173da47209fd42341687266225d62d 324 SUPERFAMILY SSF51905 10 305 1.02E-46 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_01439 8c173da47209fd42341687266225d62d 324 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 298 2.6E-50 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SYN_01439 8c173da47209fd42341687266225d62d 324 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 11 308 1.6E-114 T 11-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 SYN_02414 ccb9a030d32ff5c2787e88f7e9f49ec3 769 Pfam PF00014 Kunitz/Bovine pancreatic trypsin inhibitor domain 345 395 6.5E-15 T 11-10-2018 IPR002223 Pancreatic trypsin inhibitor Kunitz domain GO:0004867 SYN_02414 ccb9a030d32ff5c2787e88f7e9f49ec3 769 Pfam PF10092 Uncharacterized protein conserved in bacteria (DUF2330) 36 226 3.9E-9 T 11-10-2018 IPR019283 Protein of unknown function DUF2330 SYN_02414 ccb9a030d32ff5c2787e88f7e9f49ec3 769 Gene3D G3DSA:4.10.410.10 342 401 1.2E-17 T 11-10-2018 IPR036880 Pancreatic trypsin inhibitor Kunitz domain superfamily GO:0004867 SYN_02414 ccb9a030d32ff5c2787e88f7e9f49ec3 769 SMART SM00131 343 395 9.3E-15 T 11-10-2018 IPR002223 Pancreatic trypsin inhibitor Kunitz domain GO:0004867 SYN_02414 ccb9a030d32ff5c2787e88f7e9f49ec3 769 SUPERFAMILY SSF57362 341 395 3.83E-15 T 11-10-2018 IPR036880 Pancreatic trypsin inhibitor Kunitz domain superfamily GO:0004867 SYN_01739 84131645105beec2749cd8b7d75b25d4 667 SUPERFAMILY SSF56601 220 559 1.66E-103 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like SYN_01739 84131645105beec2749cd8b7d75b25d4 667 Pfam PF03717 Penicillin-binding Protein dimerisation domain 57 200 4.0E-16 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SYN_01739 84131645105beec2749cd8b7d75b25d4 667 Gene3D G3DSA:3.30.450.330 221 560 1.1E-125 T 11-10-2018 SYN_01739 84131645105beec2749cd8b7d75b25d4 667 SUPERFAMILY SSF54184 611 663 5.36E-8 T 11-10-2018 SYN_01739 84131645105beec2749cd8b7d75b25d4 667 SUPERFAMILY SSF56519 52 204 5.62E-38 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 SYN_01739 84131645105beec2749cd8b7d75b25d4 667 Gene3D G3DSA:3.40.710.10 281 477 1.1E-125 T 11-10-2018 SYN_01739 84131645105beec2749cd8b7d75b25d4 667 Gene3D G3DSA:3.90.1310.30 49 214 4.4E-39 T 11-10-2018 SYN_01739 84131645105beec2749cd8b7d75b25d4 667 Pfam PF00905 Penicillin binding protein transpeptidase domain 245 555 9.5E-88 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SYN_01824 62153cba52ff4dbeacde31b66dc62b79 1025 Gene3D G3DSA:3.40.50.300 62 283 2.4E-12 T 11-10-2018 SYN_01824 62153cba52ff4dbeacde31b66dc62b79 1025 SUPERFAMILY SSF52540 3 290 9.8E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01824 62153cba52ff4dbeacde31b66dc62b79 1025 Gene3D G3DSA:3.40.50.300 427 623 3.2E-7 T 11-10-2018 SYN_01824 62153cba52ff4dbeacde31b66dc62b79 1025 SUPERFAMILY SSF52540 101 571 3.84E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01824 62153cba52ff4dbeacde31b66dc62b79 1025 Pfam PF04851 Type III restriction enzyme, res subunit 5 260 1.2E-15 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SYN_00882 6ff2ba226ed83c2cced1eaa48d24bcef 652 Pfam PF13188 PAS domain 291 346 6.9E-7 T 11-10-2018 IPR000014 PAS domain SYN_00882 6ff2ba226ed83c2cced1eaa48d24bcef 652 Gene3D G3DSA:3.30.450.20 40 158 1.3E-24 T 11-10-2018 SYN_00882 6ff2ba226ed83c2cced1eaa48d24bcef 652 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 164 333 3.0E-5 T 11-10-2018 SYN_00882 6ff2ba226ed83c2cced1eaa48d24bcef 652 SMART SM00387 522 644 7.8E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_00882 6ff2ba226ed83c2cced1eaa48d24bcef 652 Gene3D G3DSA:3.30.565.10 485 650 2.2E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_00882 6ff2ba226ed83c2cced1eaa48d24bcef 652 SUPERFAMILY SSF55785 161 277 9.34E-16 T 11-10-2018 IPR035965 PAS domain superfamily SYN_00882 6ff2ba226ed83c2cced1eaa48d24bcef 652 Gene3D G3DSA:3.30.450.20 282 400 6.1E-20 T 11-10-2018 SYN_00882 6ff2ba226ed83c2cced1eaa48d24bcef 652 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 523 642 6.7E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_00882 6ff2ba226ed83c2cced1eaa48d24bcef 652 SUPERFAMILY SSF55785 48 160 2.9E-18 T 11-10-2018 IPR035965 PAS domain superfamily SYN_00882 6ff2ba226ed83c2cced1eaa48d24bcef 652 Pfam PF08447 PAS fold 68 152 1.7E-14 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 SYN_00882 6ff2ba226ed83c2cced1eaa48d24bcef 652 Gene3D G3DSA:1.10.287.130 409 480 7.8E-17 T 11-10-2018 SYN_00882 6ff2ba226ed83c2cced1eaa48d24bcef 652 SUPERFAMILY SSF55785 276 400 6.44E-20 T 11-10-2018 IPR035965 PAS domain superfamily SYN_00882 6ff2ba226ed83c2cced1eaa48d24bcef 652 PRINTS PR00344 Bacterial sensor protein C-terminal signature 604 622 5.8E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_00882 6ff2ba226ed83c2cced1eaa48d24bcef 652 PRINTS PR00344 Bacterial sensor protein C-terminal signature 589 599 5.8E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_00882 6ff2ba226ed83c2cced1eaa48d24bcef 652 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 585 5.8E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_00882 6ff2ba226ed83c2cced1eaa48d24bcef 652 PRINTS PR00344 Bacterial sensor protein C-terminal signature 628 641 5.8E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_00882 6ff2ba226ed83c2cced1eaa48d24bcef 652 SMART SM00086 118 160 0.027 T 11-10-2018 IPR001610 PAC motif SYN_00882 6ff2ba226ed83c2cced1eaa48d24bcef 652 SMART SM00086 239 279 15.0 T 11-10-2018 IPR001610 PAC motif SYN_00882 6ff2ba226ed83c2cced1eaa48d24bcef 652 SMART SM00086 362 402 5.1 T 11-10-2018 IPR001610 PAC motif SYN_00882 6ff2ba226ed83c2cced1eaa48d24bcef 652 SMART SM00388 417 483 0.0071 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_00882 6ff2ba226ed83c2cced1eaa48d24bcef 652 SUPERFAMILY SSF47384 413 480 3.34E-6 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SYN_00882 6ff2ba226ed83c2cced1eaa48d24bcef 652 Pfam PF13426 PAS domain 184 278 2.3E-8 T 11-10-2018 IPR000014 PAS domain SYN_00882 6ff2ba226ed83c2cced1eaa48d24bcef 652 SUPERFAMILY SSF55874 483 646 8.77E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_00882 6ff2ba226ed83c2cced1eaa48d24bcef 652 SMART SM00091 291 357 1.4E-5 T 11-10-2018 IPR000014 PAS domain SYN_00882 6ff2ba226ed83c2cced1eaa48d24bcef 652 SMART SM00091 172 241 2.8E-4 T 11-10-2018 IPR000014 PAS domain SYN_00882 6ff2ba226ed83c2cced1eaa48d24bcef 652 SMART SM00091 43 112 4.9E-8 T 11-10-2018 IPR000014 PAS domain SYN_00882 6ff2ba226ed83c2cced1eaa48d24bcef 652 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 287 409 2.2E-18 T 11-10-2018 IPR000014 PAS domain SYN_00882 6ff2ba226ed83c2cced1eaa48d24bcef 652 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 42 165 2.3E-12 T 11-10-2018 IPR000014 PAS domain SYN_00882 6ff2ba226ed83c2cced1eaa48d24bcef 652 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 168 285 6.3E-18 T 11-10-2018 IPR000014 PAS domain SYN_00882 6ff2ba226ed83c2cced1eaa48d24bcef 652 Gene3D G3DSA:3.30.450.20 160 281 3.5E-18 T 11-10-2018 SYN_00241 c57ca8eda7d2f074bc9c669a5be1502c 310 SUPERFAMILY SSF52540 8 229 1.39E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00241 c57ca8eda7d2f074bc9c669a5be1502c 310 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_00241 c57ca8eda7d2f074bc9c669a5be1502c 310 SMART SM00382 33 215 3.5E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00241 c57ca8eda7d2f074bc9c669a5be1502c 310 Pfam PF00005 ABC transporter 25 168 9.6E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_00241 c57ca8eda7d2f074bc9c669a5be1502c 310 Gene3D G3DSA:3.40.50.300 2 231 8.9E-64 T 11-10-2018 SYN_02546 ba47fbc0c7b44ee5b5332d5958d85747 742 Pfam PF03797 Autotransporter beta-domain 470 722 5.1E-70 T 11-10-2018 IPR005546 Autotransporter beta-domain SYN_02546 ba47fbc0c7b44ee5b5332d5958d85747 742 SUPERFAMILY SSF51126 46 326 3.04E-11 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor SYN_02546 ba47fbc0c7b44ee5b5332d5958d85747 742 SMART SM00869 467 732 4.3E-58 T 11-10-2018 IPR005546 Autotransporter beta-domain SYN_02546 ba47fbc0c7b44ee5b5332d5958d85747 742 SUPERFAMILY SSF103515 406 742 3.66E-66 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily SYN_02546 ba47fbc0c7b44ee5b5332d5958d85747 742 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 247 742 5.7E-45 T 11-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 SYN_02546 ba47fbc0c7b44ee5b5332d5958d85747 742 Gene3D G3DSA:2.40.128.130 451 742 1.1E-78 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily SYN_02031 99044080c4f4365eec4618d921d23a77 127 Pfam PF04608 Phosphatidylglycerophosphatase A 1 122 5.3E-31 T 11-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 SYN_02031 99044080c4f4365eec4618d921d23a77 127 SUPERFAMILY SSF101307 2 122 5.49E-23 T 11-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 SYN_02031 99044080c4f4365eec4618d921d23a77 127 PIRSF PIRSF006162 1 127 2.3E-30 T 11-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 SYN_00468 421674ee082c756b72cd36842eb65baa 551 Gene3D G3DSA:1.20.58.220 349 449 4.9E-14 T 11-10-2018 IPR038078 PhoU-like domain superfamily SYN_00468 421674ee082c756b72cd36842eb65baa 551 Gene3D G3DSA:1.20.58.220 456 551 3.5E-10 T 11-10-2018 IPR038078 PhoU-like domain superfamily SYN_00468 421674ee082c756b72cd36842eb65baa 551 Pfam PF02690 Na+/Pi-cotransporter 183 296 8.3E-18 T 11-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 SYN_00468 421674ee082c756b72cd36842eb65baa 551 Pfam PF02690 Na+/Pi-cotransporter 32 164 4.2E-35 T 11-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 SYN_00468 421674ee082c756b72cd36842eb65baa 551 Pfam PF01895 PhoU domain 463 545 7.4E-8 T 11-10-2018 IPR026022 PhoU domain SYN_00468 421674ee082c756b72cd36842eb65baa 551 Pfam PF01895 PhoU domain 357 441 1.9E-11 T 11-10-2018 IPR026022 PhoU domain SYN_00468 421674ee082c756b72cd36842eb65baa 551 SUPERFAMILY SSF109755 344 545 1.47E-36 T 11-10-2018 SYN_02678 cab7cc2c65710065e860d1797a2730db 645 Pfam PF00733 Asparagine synthase 251 639 6.1E-78 T 11-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 SYN_02678 cab7cc2c65710065e860d1797a2730db 645 PIRSF PIRSF001589 6 644 6.3E-152 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 SYN_02678 cab7cc2c65710065e860d1797a2730db 645 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 7 576 4.0E-138 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 SYN_02678 cab7cc2c65710065e860d1797a2730db 645 Gene3D G3DSA:3.60.20.10 7 193 6.4E-63 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal SYN_02678 cab7cc2c65710065e860d1797a2730db 645 SUPERFAMILY SSF52402 231 638 3.72E-67 T 11-10-2018 SYN_02678 cab7cc2c65710065e860d1797a2730db 645 Pfam PF13522 Glutamine amidotransferase domain 38 169 2.5E-42 T 11-10-2018 SYN_02678 cab7cc2c65710065e860d1797a2730db 645 SUPERFAMILY SSF56235 6 227 3.17E-63 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal SYN_02482 82f19fd7ecce6ddd0288dbf10df1db72 238 SMART SM00463 138 224 4.4E-8 T 11-10-2018 IPR002625 Smr domain SYN_02482 82f19fd7ecce6ddd0288dbf10df1db72 238 Pfam PF01713 Smr domain 141 224 1.5E-22 T 11-10-2018 IPR002625 Smr domain SYN_02482 82f19fd7ecce6ddd0288dbf10df1db72 238 Gene3D G3DSA:3.30.1370.110 98 228 1.2E-35 T 11-10-2018 SYN_02482 82f19fd7ecce6ddd0288dbf10df1db72 238 SUPERFAMILY SSF160443 139 224 1.02E-15 T 11-10-2018 IPR036063 Smr domain superfamily SYN_00365 d122a62f62699305b5ca24165f553fb2 368 Gene3D G3DSA:3.40.190.10 27 159 1.9E-10 T 11-10-2018 SYN_00365 d122a62f62699305b5ca24165f553fb2 368 Gene3D G3DSA:3.40.190.10 160 345 5.6E-26 T 11-10-2018 SYN_00365 d122a62f62699305b5ca24165f553fb2 368 Pfam PF13379 NMT1-like family 26 302 2.9E-49 T 11-10-2018 SYN_00365 d122a62f62699305b5ca24165f553fb2 368 SUPERFAMILY SSF53850 31 291 9.32E-28 T 11-10-2018 SYN_02514 6ce5ac853cb3e4bc538e6eeea4c213c3 288 SUPERFAMILY SSF103481 43 138 2.88E-6 T 11-10-2018 SYN_02514 6ce5ac853cb3e4bc538e6eeea4c213c3 288 SUPERFAMILY SSF103481 208 287 1.27E-6 T 11-10-2018 SYN_02514 6ce5ac853cb3e4bc538e6eeea4c213c3 288 Pfam PF00892 EamA-like transporter family 150 283 1.7E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SYN_02514 6ce5ac853cb3e4bc538e6eeea4c213c3 288 Pfam PF00892 EamA-like transporter family 5 132 4.3E-7 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SYN_01239 af824801fbcf19a5c9a31851b6a40352 75 SUPERFAMILY SSF111249 1 48 2.75E-9 T 11-10-2018 IPR036076 Fructose-1,6-bisphosphatase, class V superfamily KEGG: 00010+3.1.3.11+4.1.2.13|KEGG: 00030+3.1.3.11+4.1.2.13|KEGG: 00051+3.1.3.11+4.1.2.13|KEGG: 00680+3.1.3.11+4.1.2.13|KEGG: 00710+3.1.3.11+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 SYN_01239 af824801fbcf19a5c9a31851b6a40352 75 Pfam PF01950 Fructose-1,6-bisphosphatase 1 48 8.0E-11 T 11-10-2018 IPR002803 Fructose-1,6-bisphosphatase, class V KEGG: 00010+4.1.2.13+3.1.3.11|KEGG: 00030+4.1.2.13+3.1.3.11|KEGG: 00051+4.1.2.13+3.1.3.11|KEGG: 00680+4.1.2.13+3.1.3.11|KEGG: 00710+4.1.2.13+3.1.3.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 SYN_01239 af824801fbcf19a5c9a31851b6a40352 75 ProDom PD014260 DIHYDROOROTATE DEHYDROGENASE THERMOPHILE-SPECIFIC TA1428 ST0318 BLL2851 16-BISPHOSPHATASE APE1109 PF0613 MJ0299 1 47 1.0E-8 T 11-10-2018 IPR002803 Fructose-1,6-bisphosphatase, class V KEGG: 00010+4.1.2.13+3.1.3.11|KEGG: 00030+4.1.2.13+3.1.3.11|KEGG: 00051+4.1.2.13+3.1.3.11|KEGG: 00680+4.1.2.13+3.1.3.11|KEGG: 00710+4.1.2.13+3.1.3.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 SYN_00417 39209562b13b2f37be85283a22a387bb 392 Pfam PF02772 S-adenosylmethionine synthetase, central domain 121 237 2.4E-27 T 11-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 SYN_00417 39209562b13b2f37be85283a22a387bb 392 Gene3D G3DSA:3.30.300.10 108 384 7.8E-112 T 11-10-2018 SYN_00417 39209562b13b2f37be85283a22a387bb 392 SUPERFAMILY SSF55973 2 113 2.2E-24 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 SYN_00417 39209562b13b2f37be85283a22a387bb 392 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 3 389 1.4E-96 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 SYN_00417 39209562b13b2f37be85283a22a387bb 392 SUPERFAMILY SSF55973 119 237 9.71E-29 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 SYN_00417 39209562b13b2f37be85283a22a387bb 392 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 3 106 9.0E-23 T 11-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 SYN_00417 39209562b13b2f37be85283a22a387bb 392 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 123 133 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 SYN_00417 39209562b13b2f37be85283a22a387bb 392 Gene3D G3DSA:3.30.300.10 8 281 7.8E-112 T 11-10-2018 SYN_00417 39209562b13b2f37be85283a22a387bb 392 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 245 379 1.1E-42 T 11-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 SYN_00417 39209562b13b2f37be85283a22a387bb 392 PIRSF PIRSF000497 1 391 7.6E-101 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 SYN_00417 39209562b13b2f37be85283a22a387bb 392 Gene3D G3DSA:3.30.300.10 3 242 7.8E-112 T 11-10-2018 SYN_00417 39209562b13b2f37be85283a22a387bb 392 SUPERFAMILY SSF55973 245 384 1.69E-39 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 SYN_01075 3829f64368459e81561008d684f397c3 537 Pfam PF14559 Tetratricopeptide repeat 145 202 1.8E-5 T 11-10-2018 SYN_01075 3829f64368459e81561008d684f397c3 537 SUPERFAMILY SSF48452 36 198 2.77E-22 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_01075 3829f64368459e81561008d684f397c3 537 Gene3D G3DSA:1.25.40.10 133 213 1.5E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_01075 3829f64368459e81561008d684f397c3 537 Pfam PF13432 Tetratricopeptide repeat 37 95 4.8E-7 T 11-10-2018 SYN_01075 3829f64368459e81561008d684f397c3 537 Gene3D G3DSA:1.25.40.10 28 132 7.1E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_01075 3829f64368459e81561008d684f397c3 537 SMART SM00028 30 63 28.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01075 3829f64368459e81561008d684f397c3 537 SMART SM00028 98 131 120.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01075 3829f64368459e81561008d684f397c3 537 SMART SM00028 64 97 70.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01075 3829f64368459e81561008d684f397c3 537 SMART SM00028 132 165 18.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01385 a3b7f4d7f9748906b18d41824debcab6 73 Pfam PF00301 Rubredoxin 13 59 5.4E-22 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 SYN_01385 a3b7f4d7f9748906b18d41824debcab6 73 PRINTS PR00163 Rubredoxin signature 43 59 6.1E-10 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 SYN_01385 a3b7f4d7f9748906b18d41824debcab6 73 PRINTS PR00163 Rubredoxin signature 13 29 6.1E-10 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 SYN_01385 a3b7f4d7f9748906b18d41824debcab6 73 PIRSF PIRSF000071 10 73 2.9E-32 T 11-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 SYN_01385 a3b7f4d7f9748906b18d41824debcab6 73 SUPERFAMILY SSF57802 10 65 1.21E-21 T 11-10-2018 SYN_01385 a3b7f4d7f9748906b18d41824debcab6 73 Gene3D G3DSA:2.20.28.10 5 66 8.2E-25 T 11-10-2018 SYN_00289 f26fc2fade40ebb4fcaf4e39ebb2ad26 169 Gene3D G3DSA:2.20.25.120 54 84 8.6E-58 T 11-10-2018 SYN_00289 f26fc2fade40ebb4fcaf4e39ebb2ad26 169 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 10 164 2.3E-47 T 11-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 SYN_00289 f26fc2fade40ebb4fcaf4e39ebb2ad26 169 SUPERFAMILY SSF52540 8 164 1.84E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00289 f26fc2fade40ebb4fcaf4e39ebb2ad26 169 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 10 141 1.1E-49 T 11-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 SYN_00289 f26fc2fade40ebb4fcaf4e39ebb2ad26 169 Gene3D G3DSA:3.40.50.300 11 163 8.6E-58 T 11-10-2018 SYN_00570 3520b1d7c3f23346da0af198bed96a2e 401 PIRSF PIRSF000521 2 126 1.6E-7 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SYN_00570 3520b1d7c3f23346da0af198bed96a2e 401 PIRSF PIRSF000521 170 397 2.2E-28 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SYN_00570 3520b1d7c3f23346da0af198bed96a2e 401 PIRSF PIRSF000521 120 152 120.0 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SYN_00570 3520b1d7c3f23346da0af198bed96a2e 401 Gene3D G3DSA:3.40.640.10 57 300 8.2E-114 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SYN_00570 3520b1d7c3f23346da0af198bed96a2e 401 SUPERFAMILY SSF53383 13 394 3.34E-108 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SYN_00570 3520b1d7c3f23346da0af198bed96a2e 401 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 218 255 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SYN_00570 3520b1d7c3f23346da0af198bed96a2e 401 Pfam PF00202 Aminotransferase class-III 20 394 5.8E-91 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SYN_00570 3520b1d7c3f23346da0af198bed96a2e 401 Gene3D G3DSA:3.90.1150.10 24 386 8.2E-114 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SYN_00748 97b9c1c7a6a10b09494226acd97fcf0c 773 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 438 574 1.9E-47 T 11-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain SYN_00748 97b9c1c7a6a10b09494226acd97fcf0c 773 Pfam PF13549 ATP-grasp domain 57 270 2.4E-58 T 11-10-2018 SYN_00748 97b9c1c7a6a10b09494226acd97fcf0c 773 Pfam PF13380 CoA binding domain 295 420 3.6E-18 T 11-10-2018 IPR003781 CoA-binding GO:0048037 SYN_00748 97b9c1c7a6a10b09494226acd97fcf0c 773 SUPERFAMILY SSF56059 64 271 2.98E-38 T 11-10-2018 SYN_00748 97b9c1c7a6a10b09494226acd97fcf0c 773 SUPERFAMILY SSF52210 418 573 6.28E-37 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_00748 97b9c1c7a6a10b09494226acd97fcf0c 773 Gene3D G3DSA:3.30.1490.20 83 155 4.2E-64 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 SYN_00748 97b9c1c7a6a10b09494226acd97fcf0c 773 SUPERFAMILY SSF51735 287 421 2.01E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_00748 97b9c1c7a6a10b09494226acd97fcf0c 773 Gene3D G3DSA:3.40.50.261 579 755 9.9E-32 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_00748 97b9c1c7a6a10b09494226acd97fcf0c 773 Gene3D G3DSA:3.40.50.720 286 415 2.5E-36 T 11-10-2018 SYN_00748 97b9c1c7a6a10b09494226acd97fcf0c 773 SUPERFAMILY SSF52210 581 755 1.07E-24 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_00748 97b9c1c7a6a10b09494226acd97fcf0c 773 Gene3D G3DSA:3.40.50.261 416 578 1.0E-52 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_00748 97b9c1c7a6a10b09494226acd97fcf0c 773 SMART SM00881 291 386 6.4E-28 T 11-10-2018 IPR003781 CoA-binding GO:0048037 SYN_00748 97b9c1c7a6a10b09494226acd97fcf0c 773 Gene3D G3DSA:3.30.470.20 65 269 4.2E-64 T 11-10-2018 SYN_02704 169cb9e429a948cb2c07bb892a21f34c 259 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 32 131 1.6E-17 T 11-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 SYN_02704 169cb9e429a948cb2c07bb892a21f34c 259 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 35 257 1.2E-60 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 SYN_02704 169cb9e429a948cb2c07bb892a21f34c 259 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 34 258 26.323 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 SYN_02704 169cb9e429a948cb2c07bb892a21f34c 259 Gene3D G3DSA:2.160.20.70 149 259 3.4E-31 T 11-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 SYN_02704 169cb9e429a948cb2c07bb892a21f34c 259 SUPERFAMILY SSF63848 153 257 4.18E-29 T 11-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 SYN_02704 169cb9e429a948cb2c07bb892a21f34c 259 Gene3D G3DSA:3.30.750.120 28 148 1.5E-32 T 11-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily SYN_02704 169cb9e429a948cb2c07bb892a21f34c 259 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 155 254 5.9E-30 T 11-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 SYN_01159 77d9f55354ab4ef78316acb033f586e3 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 138 6.9E-31 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SYN_01159 77d9f55354ab4ef78316acb033f586e3 342 Gene3D G3DSA:3.90.180.10 18 335 7.6E-86 T 11-10-2018 SYN_01159 77d9f55354ab4ef78316acb033f586e3 342 TIGRFAM TIGR02822 adh_fam_2: zinc-binding alcohol dehydrogenase family protein 18 340 1.5E-88 T 11-10-2018 IPR014187 Alcohol dehydrogenase, zinc-binding type 2 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 SYN_01159 77d9f55354ab4ef78316acb033f586e3 342 Gene3D G3DSA:3.40.50.720 153 290 7.6E-86 T 11-10-2018 SYN_01159 77d9f55354ab4ef78316acb033f586e3 342 SUPERFAMILY SSF50129 15 165 5.17E-51 T 11-10-2018 IPR011032 GroES-like superfamily SYN_01159 77d9f55354ab4ef78316acb033f586e3 342 SMART SM00829 17 340 1.8E-4 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SYN_01159 77d9f55354ab4ef78316acb033f586e3 342 SUPERFAMILY SSF51735 144 306 2.27E-21 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_01919 390f13c4e324162e91e044a4705fa90d 522 SMART SM00065 40 193 2.3E-13 T 11-10-2018 IPR003018 GAF domain GO:0005515 SYN_01919 390f13c4e324162e91e044a4705fa90d 522 Pfam PF13185 GAF domain 40 183 2.2E-10 T 11-10-2018 IPR003018 GAF domain GO:0005515 SYN_01919 390f13c4e324162e91e044a4705fa90d 522 SUPERFAMILY SSF52540 382 516 1.06E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01919 390f13c4e324162e91e044a4705fa90d 522 Gene3D G3DSA:3.30.450.40 20 192 4.8E-28 T 11-10-2018 IPR029016 GAF-like domain superfamily SYN_01919 390f13c4e324162e91e044a4705fa90d 522 Gene3D G3DSA:3.30.450.40 193 353 1.5E-11 T 11-10-2018 IPR029016 GAF-like domain superfamily SYN_01919 390f13c4e324162e91e044a4705fa90d 522 Pfam PF00158 Sigma-54 interaction domain 383 515 2.6E-50 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SYN_01919 390f13c4e324162e91e044a4705fa90d 522 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 469 484 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SYN_01919 390f13c4e324162e91e044a4705fa90d 522 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 407 420 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SYN_01919 390f13c4e324162e91e044a4705fa90d 522 SUPERFAMILY SSF55781 23 190 5.02E-22 T 11-10-2018 SYN_01919 390f13c4e324162e91e044a4705fa90d 522 Gene3D G3DSA:3.40.50.300 369 518 2.8E-45 T 11-10-2018 SYN_01919 390f13c4e324162e91e044a4705fa90d 522 SUPERFAMILY SSF55781 196 367 1.03E-11 T 11-10-2018 SYN_00071 fb1f5d0735c7fad83233b647a4f9695c 71 Gene3D G3DSA:1.20.5.1030 12 69 1.4E-19 T 11-10-2018 IPR038379 SecE superfamily SYN_00071 fb1f5d0735c7fad83233b647a4f9695c 71 Hamap MF_00422 Protein translocase subunit SecE [secE]. 13 68 12.541 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 SYN_00071 fb1f5d0735c7fad83233b647a4f9695c 71 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 17 70 6.8E-19 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 SYN_00071 fb1f5d0735c7fad83233b647a4f9695c 71 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 18 46 - T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 SYN_00071 fb1f5d0735c7fad83233b647a4f9695c 71 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 17 68 3.1E-19 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 SYN_02391 922e999c5187218465e5220cf2fc49cc 373 SUPERFAMILY SSF53448 1 275 1.54E-36 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_02391 922e999c5187218465e5220cf2fc49cc 373 Gene3D G3DSA:3.90.550.10 2 231 1.1E-44 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_02391 922e999c5187218465e5220cf2fc49cc 373 Pfam PF00535 Glycosyl transferase family 2 7 139 7.6E-25 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 SYN_02391 922e999c5187218465e5220cf2fc49cc 373 Pfam PF04138 GtrA-like protein 240 367 5.2E-22 T 11-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 SYN_02778 02c5755d26b411e5424a3cfef4fae2f6 415 SUPERFAMILY SSF51717 138 414 4.32E-92 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SYN_02778 02c5755d26b411e5424a3cfef4fae2f6 415 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 184 197 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SYN_02778 02c5755d26b411e5424a3cfef4fae2f6 415 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 150 165 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SYN_02778 02c5755d26b411e5424a3cfef4fae2f6 415 Pfam PF00809 Pterin binding enzyme 151 397 5.0E-84 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SYN_02778 02c5755d26b411e5424a3cfef4fae2f6 415 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 150 411 2.5E-92 T 11-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 SYN_02778 02c5755d26b411e5424a3cfef4fae2f6 415 Gene3D G3DSA:3.20.20.20 128 415 7.8E-105 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SYN_01151 6b199df738eef14eb704961798850305 84 Pfam PF00550 Phosphopantetheine attachment site 16 78 1.1E-5 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain SYN_01151 6b199df738eef14eb704961798850305 84 SUPERFAMILY SSF47336 9 83 2.59E-11 T 11-10-2018 IPR036736 ACP-like superfamily SYN_01151 6b199df738eef14eb704961798850305 84 Gene3D G3DSA:1.10.1200.10 5 84 1.2E-20 T 11-10-2018 IPR036736 ACP-like superfamily SYN_01959 3a674924b98c65bfbdbba09fa40d88e3 324 Gene3D G3DSA:1.10.3210.10 21 191 7.6E-23 T 11-10-2018 SYN_01959 3a674924b98c65bfbdbba09fa40d88e3 324 Pfam PF01966 HD domain 55 156 1.3E-12 T 11-10-2018 IPR006674 HD domain SYN_01959 3a674924b98c65bfbdbba09fa40d88e3 324 TIGRFAM TIGR00277 HDIG: HDIG domain 54 132 5.9E-8 T 11-10-2018 IPR006675 HDIG domain SYN_01959 3a674924b98c65bfbdbba09fa40d88e3 324 SUPERFAMILY SSF109604 54 222 3.87E-26 T 11-10-2018 SYN_01959 3a674924b98c65bfbdbba09fa40d88e3 324 SMART SM00471 50 167 1.1E-7 T 11-10-2018 IPR003607 HD/PDEase domain SYN_02924 f7906159210f3076dbe302dab006f378 166 Pfam PF02954 Bacterial regulatory protein, Fis family 123 159 1.1E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_02924 f7906159210f3076dbe302dab006f378 166 Gene3D G3DSA:1.10.10.60 76 162 1.5E-15 T 11-10-2018 SYN_02924 f7906159210f3076dbe302dab006f378 166 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 142 162 7.3E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_02924 f7906159210f3076dbe302dab006f378 166 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 125 142 7.3E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_02924 f7906159210f3076dbe302dab006f378 166 SUPERFAMILY SSF46689 106 162 1.65E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SYN_03226 76de5f3b1401db14d04f0597dfceb0cb 233 SUPERFAMILY SSF46785 17 82 1.18E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_03226 76de5f3b1401db14d04f0597dfceb0cb 233 SMART SM00895 88 212 6.8E-13 T 11-10-2018 IPR011711 GntR, C-terminal SYN_03226 76de5f3b1401db14d04f0597dfceb0cb 233 Pfam PF07729 FCD domain 88 211 1.1E-20 T 11-10-2018 IPR011711 GntR, C-terminal SYN_03226 76de5f3b1401db14d04f0597dfceb0cb 233 SUPERFAMILY SSF48008 84 214 1.07E-21 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal SYN_03226 76de5f3b1401db14d04f0597dfceb0cb 233 Gene3D G3DSA:1.20.120.530 82 224 8.7E-22 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal SYN_03226 76de5f3b1401db14d04f0597dfceb0cb 233 Gene3D G3DSA:1.10.10.10 5 78 2.6E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_03226 76de5f3b1401db14d04f0597dfceb0cb 233 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 75 9.0E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SYN_03226 76de5f3b1401db14d04f0597dfceb0cb 233 SMART SM00345 20 78 2.8E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SYN_00272 86ac2d59512ed775d4119e61bfb8e63f 427 SUPERFAMILY SSF63882 23 196 1.06E-50 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_00272 86ac2d59512ed775d4119e61bfb8e63f 427 SUPERFAMILY SSF63867 348 424 4.45E-20 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_00272 86ac2d59512ed775d4119e61bfb8e63f 427 Pfam PF03454 MoeA C-terminal region (domain IV) 352 421 4.8E-18 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_00272 86ac2d59512ed775d4119e61bfb8e63f 427 Pfam PF00994 Probable molybdopterin binding domain 202 336 2.0E-22 T 11-10-2018 IPR001453 MoaB/Mog domain SYN_00272 86ac2d59512ed775d4119e61bfb8e63f 427 Gene3D G3DSA:2.170.190.11 65 162 4.6E-126 T 11-10-2018 SYN_00272 86ac2d59512ed775d4119e61bfb8e63f 427 SMART SM00852 201 338 1.5E-30 T 11-10-2018 IPR001453 MoaB/Mog domain SYN_00272 86ac2d59512ed775d4119e61bfb8e63f 427 Pfam PF03453 MoeA N-terminal region (domain I and II) 23 187 1.3E-42 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_00272 86ac2d59512ed775d4119e61bfb8e63f 427 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 198 334 1.1E-28 T 11-10-2018 IPR001453 MoaB/Mog domain SYN_00272 86ac2d59512ed775d4119e61bfb8e63f 427 Gene3D G3DSA:2.40.340.10 349 417 4.6E-126 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_00272 86ac2d59512ed775d4119e61bfb8e63f 427 Gene3D G3DSA:3.40.980.10 196 348 4.6E-126 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily SYN_00272 86ac2d59512ed775d4119e61bfb8e63f 427 Gene3D G3DSA:3.90.105.10 42 195 4.6E-126 T 11-10-2018 SYN_00272 86ac2d59512ed775d4119e61bfb8e63f 427 SUPERFAMILY SSF53218 198 342 1.7E-35 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily SYN_02303 82add4eabcec2865e46c8c97fa1f68b0 530 Pfam PF06074 Protein of unknown function (DUF935) 5 525 2.5E-178 T 11-10-2018 IPR009279 Protein of unknown function DUF935 SYN_00911 ee0bf6462b3f28b72dafe926b6698360 338 Gene3D G3DSA:3.30.360.10 129 317 3.0E-145 T 11-10-2018 SYN_00911 ee0bf6462b3f28b72dafe926b6698360 338 SUPERFAMILY SSF55347 130 321 4.46E-80 T 11-10-2018 SYN_00911 ee0bf6462b3f28b72dafe926b6698360 338 PIRSF PIRSF000148 3 338 2.6E-137 T 11-10-2018 SYN_00911 ee0bf6462b3f28b72dafe926b6698360 338 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 140 320 2.0E-61 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 SYN_00911 ee0bf6462b3f28b72dafe926b6698360 338 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 5 335 5.5E-148 T 11-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 SYN_00911 ee0bf6462b3f28b72dafe926b6698360 338 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 119 4.8E-31 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SYN_00911 ee0bf6462b3f28b72dafe926b6698360 338 SUPERFAMILY SSF51735 4 158 8.2E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_00911 ee0bf6462b3f28b72dafe926b6698360 338 SMART SM00859 5 120 2.9E-42 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SYN_00911 ee0bf6462b3f28b72dafe926b6698360 338 Gene3D G3DSA:3.40.50.720 6 331 3.0E-145 T 11-10-2018 SYN_00911 ee0bf6462b3f28b72dafe926b6698360 338 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 3 334 38.202 T 11-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 SYN_00778 77ae9d01f653f08722e30dbaa27b6ca9 366 SMART SM00382 42 210 7.1E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00778 77ae9d01f653f08722e30dbaa27b6ca9 366 Pfam PF13401 AAA domain 42 167 3.7E-23 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00778 77ae9d01f653f08722e30dbaa27b6ca9 366 SUPERFAMILY SSF52540 5 263 6.23E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00778 77ae9d01f653f08722e30dbaa27b6ca9 366 Gene3D G3DSA:3.40.50.300 26 185 2.6E-16 T 11-10-2018 SYN_02655 19b411cc2e00bbc8d6eba27938707ff2 295 Pfam PF01061 ABC-2 type transporter 45 255 1.1E-24 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 SYN_02785 6b23e01aad47be6783a914f3c7a0f329 194 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 192 4.1E-96 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SYN_02785 6b23e01aad47be6783a914f3c7a0f329 194 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 3.1E-51 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SYN_02785 6b23e01aad47be6783a914f3c7a0f329 194 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 3.1E-51 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SYN_02785 6b23e01aad47be6783a914f3c7a0f329 194 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 3.1E-51 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SYN_02785 6b23e01aad47be6783a914f3c7a0f329 194 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 3.1E-51 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SYN_02785 6b23e01aad47be6783a914f3c7a0f329 194 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 3.1E-51 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SYN_02785 6b23e01aad47be6783a914f3c7a0f329 194 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 43.604 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SYN_02785 6b23e01aad47be6783a914f3c7a0f329 194 SUPERFAMILY SSF52096 11 190 6.04E-69 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily SYN_02785 6b23e01aad47be6783a914f3c7a0f329 194 Gene3D G3DSA:3.90.226.10 1 194 7.7E-81 T 11-10-2018 SYN_02785 6b23e01aad47be6783a914f3c7a0f329 194 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 90 101 - T 11-10-2018 IPR018215 ClpP, Ser active site SYN_02785 6b23e01aad47be6783a914f3c7a0f329 194 Pfam PF00574 Clp protease 13 192 1.1E-82 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA SYN_02785 6b23e01aad47be6783a914f3c7a0f329 194 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 11-10-2018 IPR033135 ClpP, histidine active site SYN_00559 21ebfd791ef2edb3710da111879aa559 262 Pfam PF04468 PSP1 C-terminal conserved region 75 160 9.9E-27 T 11-10-2018 IPR007557 PSP1, C-terminal SYN_02498 1bb7757867e8793ee9f1bb98d09e19e7 380 SUPERFAMILY SSF52518 9 261 8.34E-73 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold SYN_02498 1bb7757867e8793ee9f1bb98d09e19e7 380 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 19 245 1.1E-73 T 11-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 SYN_02498 1bb7757867e8793ee9f1bb98d09e19e7 380 SUPERFAMILY SSF52922 271 376 9.55E-25 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 SYN_02498 1bb7757867e8793ee9f1bb98d09e19e7 380 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 278 372 6.5E-21 T 11-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II SYN_02498 1bb7757867e8793ee9f1bb98d09e19e7 380 Gene3D G3DSA:3.40.50.920 267 380 1.8E-24 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 SYN_02498 1bb7757867e8793ee9f1bb98d09e19e7 380 Gene3D G3DSA:3.40.50.970 1 197 3.6E-78 T 11-10-2018 SYN_02581 d27438e3141a59cea6a7c4ec3cfd0e8e 437 Gene3D G3DSA:3.30.450.20 66 203 4.0E-12 T 11-10-2018 SYN_02581 d27438e3141a59cea6a7c4ec3cfd0e8e 437 Gene3D G3DSA:3.30.565.10 271 432 6.1E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_02581 d27438e3141a59cea6a7c4ec3cfd0e8e 437 SMART SM00387 313 435 1.9E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_02581 d27438e3141a59cea6a7c4ec3cfd0e8e 437 SUPERFAMILY SSF55874 295 433 5.24E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_02581 d27438e3141a59cea6a7c4ec3cfd0e8e 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 8.3E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_02581 d27438e3141a59cea6a7c4ec3cfd0e8e 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 390 8.3E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_02581 d27438e3141a59cea6a7c4ec3cfd0e8e 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 413 8.3E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_02581 d27438e3141a59cea6a7c4ec3cfd0e8e 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 432 8.3E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_02581 d27438e3141a59cea6a7c4ec3cfd0e8e 437 Pfam PF13426 PAS domain 94 191 1.7E-8 T 11-10-2018 IPR000014 PAS domain SYN_02581 d27438e3141a59cea6a7c4ec3cfd0e8e 437 Gene3D G3DSA:1.10.287.130 212 270 6.1E-36 T 11-10-2018 SYN_02581 d27438e3141a59cea6a7c4ec3cfd0e8e 437 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 314 434 2.1E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_02581 d27438e3141a59cea6a7c4ec3cfd0e8e 437 SUPERFAMILY SSF55785 85 194 9.63E-8 T 11-10-2018 IPR035965 PAS domain superfamily SYN_02774 a34be2f2818d3bbc8c475941bf086591 323 SUPERFAMILY SSF51735 30 193 3.16E-26 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_02774 a34be2f2818d3bbc8c475941bf086591 323 Pfam PF10728 Domain of unknown function (DUF2520) 163 288 2.4E-37 T 11-10-2018 IPR018931 Domain of unknown function DUF2520 SYN_02774 a34be2f2818d3bbc8c475941bf086591 323 SUPERFAMILY SSF48179 195 298 2.07E-26 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 SYN_02774 a34be2f2818d3bbc8c475941bf086591 323 Gene3D G3DSA:3.40.50.720 30 192 2.8E-33 T 11-10-2018 SYN_02774 a34be2f2818d3bbc8c475941bf086591 323 Gene3D G3DSA:1.10.1040.20 194 297 8.4E-30 T 11-10-2018 IPR037108 TM1727-like, C-terminal domain superfamily SYN_02774 a34be2f2818d3bbc8c475941bf086591 323 Pfam PF10727 Rossmann-like domain 31 145 1.8E-16 T 11-10-2018 IPR019665 Putative oxidoreductase/dehydrogenase, Rossmann-like domain SYN_00619 3e2b73361761353a14583deab8e431af 281 Gene3D G3DSA:3.20.20.140 2 248 9.8E-84 T 11-10-2018 SYN_00619 3e2b73361761353a14583deab8e431af 281 SMART SM00481 2 67 7.6E-21 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal SYN_00619 3e2b73361761353a14583deab8e431af 281 Pfam PF02811 PHP domain 3 121 5.2E-8 T 11-10-2018 IPR004013 PHP domain GO:0003824 SYN_00619 3e2b73361761353a14583deab8e431af 281 SUPERFAMILY SSF89550 1 260 5.69E-44 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 SYN_00619 3e2b73361761353a14583deab8e431af 281 Gene3D G3DSA:1.10.150.650 95 166 9.8E-84 T 11-10-2018 SYN_01980 2bd371f3cf5b420a3f107364c1eeb4f1 194 Gene3D G3DSA:3.40.50.10490 1 191 2.7E-65 T 11-10-2018 SYN_01980 2bd371f3cf5b420a3f107364c1eeb4f1 194 Pfam PF13580 SIS domain 20 144 4.4E-24 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 SYN_01980 2bd371f3cf5b420a3f107364c1eeb4f1 194 SUPERFAMILY SSF53697 1 188 1.18E-48 T 11-10-2018 SYN_01980 2bd371f3cf5b420a3f107364c1eeb4f1 194 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 187 33.436 T 11-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 SYN_00060 328939d988e15299908987280a9264b6 232 Gene3D G3DSA:1.20.58.220 1 117 1.4E-40 T 11-10-2018 IPR038078 PhoU-like domain superfamily SYN_00060 328939d988e15299908987280a9264b6 232 Gene3D G3DSA:1.20.58.220 118 229 1.5E-39 T 11-10-2018 IPR038078 PhoU-like domain superfamily SYN_00060 328939d988e15299908987280a9264b6 232 PIRSF PIRSF003107 4 224 1.4E-70 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SYN_00060 328939d988e15299908987280a9264b6 232 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 10 218 3.2E-66 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SYN_00060 328939d988e15299908987280a9264b6 232 Pfam PF01895 PhoU domain 25 109 7.7E-23 T 11-10-2018 IPR026022 PhoU domain SYN_00060 328939d988e15299908987280a9264b6 232 Pfam PF01895 PhoU domain 125 209 3.2E-20 T 11-10-2018 IPR026022 PhoU domain SYN_00060 328939d988e15299908987280a9264b6 232 SUPERFAMILY SSF109755 9 223 2.62E-71 T 11-10-2018 SYN_01414 1e5b9a0bd6a55cc910e4b4f92da617be 277 SMART SM00028 156 189 2.2E-6 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01414 1e5b9a0bd6a55cc910e4b4f92da617be 277 SMART SM00028 51 84 0.82 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01414 1e5b9a0bd6a55cc910e4b4f92da617be 277 SMART SM00028 227 260 5.9E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01414 1e5b9a0bd6a55cc910e4b4f92da617be 277 SMART SM00028 85 119 140.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01414 1e5b9a0bd6a55cc910e4b4f92da617be 277 SMART SM00028 120 153 7.9E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01414 1e5b9a0bd6a55cc910e4b4f92da617be 277 SMART SM00028 193 226 0.12 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_01414 1e5b9a0bd6a55cc910e4b4f92da617be 277 Pfam PF13414 TPR repeat 58 96 1.1E-7 T 11-10-2018 SYN_01414 1e5b9a0bd6a55cc910e4b4f92da617be 277 Pfam PF13424 Tetratricopeptide repeat 120 183 4.9E-9 T 11-10-2018 SYN_01414 1e5b9a0bd6a55cc910e4b4f92da617be 277 Pfam PF14559 Tetratricopeptide repeat 203 263 6.8E-12 T 11-10-2018 SYN_01414 1e5b9a0bd6a55cc910e4b4f92da617be 277 Gene3D G3DSA:1.25.40.10 47 194 2.9E-33 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_01414 1e5b9a0bd6a55cc910e4b4f92da617be 277 Gene3D G3DSA:1.25.40.10 195 275 3.2E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_01414 1e5b9a0bd6a55cc910e4b4f92da617be 277 SUPERFAMILY SSF81901 53 261 7.85E-32 T 11-10-2018 SYN_01177 3cce6574330bbcdefad7cd7104b25ef9 240 SUPERFAMILY SSF56281 19 223 6.29E-25 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_01177 3cce6574330bbcdefad7cd7104b25ef9 240 Pfam PF12706 Beta-lactamase superfamily domain 48 176 7.6E-9 T 11-10-2018 IPR001279 Metallo-beta-lactamase SYN_01177 3cce6574330bbcdefad7cd7104b25ef9 240 Gene3D G3DSA:3.60.15.10 1 237 1.5E-44 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_01177 3cce6574330bbcdefad7cd7104b25ef9 240 SMART SM00849 20 207 0.004 T 11-10-2018 IPR001279 Metallo-beta-lactamase SYN_00868 e89b63f7249f3c9121fd4e474f1df5ba 419 Gene3D G3DSA:3.90.550.10 10 279 2.8E-43 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_00868 e89b63f7249f3c9121fd4e474f1df5ba 419 Pfam PF00535 Glycosyl transferase family 2 29 159 3.0E-8 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 SYN_00868 e89b63f7249f3c9121fd4e474f1df5ba 419 SUPERFAMILY SSF53448 27 405 3.38E-71 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_01609 753e33bec53a4d411e89ff9830073ad6 208 SUPERFAMILY SSF52218 1 175 1.33E-44 T 11-10-2018 IPR029039 Flavoprotein-like superfamily SYN_01609 753e33bec53a4d411e89ff9830073ad6 208 Gene3D G3DSA:3.40.50.360 2 180 1.6E-43 T 11-10-2018 IPR029039 Flavoprotein-like superfamily SYN_01609 753e33bec53a4d411e89ff9830073ad6 208 Pfam PF02525 Flavodoxin-like fold 3 161 2.9E-37 T 11-10-2018 IPR003680 Flavodoxin-like fold SYN_02447 572e603d5616d5c8885abdd7af2ece3c 413 Gene3D G3DSA:3.50.50.60 122 256 4.4E-53 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_02447 572e603d5616d5c8885abdd7af2ece3c 413 SUPERFAMILY SSF51905 1 323 1.36E-40 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_02447 572e603d5616d5c8885abdd7af2ece3c 413 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 298 1.3E-30 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SYN_02447 572e603d5616d5c8885abdd7af2ece3c 413 Gene3D G3DSA:3.50.50.60 7 299 4.4E-53 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_02447 572e603d5616d5c8885abdd7af2ece3c 413 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 276 298 4.4E-22 T 11-10-2018 SYN_02447 572e603d5616d5c8885abdd7af2ece3c 413 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 110 128 4.4E-22 T 11-10-2018 SYN_02447 572e603d5616d5c8885abdd7af2ece3c 413 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 4.4E-22 T 11-10-2018 SYN_02447 572e603d5616d5c8885abdd7af2ece3c 413 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 157 175 4.4E-22 T 11-10-2018 SYN_02447 572e603d5616d5c8885abdd7af2ece3c 413 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 248 264 4.4E-22 T 11-10-2018 SYN_02447 572e603d5616d5c8885abdd7af2ece3c 413 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 291 298 3.2E-16 T 11-10-2018 SYN_02447 572e603d5616d5c8885abdd7af2ece3c 413 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 3.2E-16 T 11-10-2018 SYN_02447 572e603d5616d5c8885abdd7af2ece3c 413 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 157 182 3.2E-16 T 11-10-2018 SYN_02447 572e603d5616d5c8885abdd7af2ece3c 413 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 249 263 3.2E-16 T 11-10-2018 SYN_01428 6c2ddf5f0d569ecb725f9093d4d76894 660 SMART SM00471 491 627 8.1E-5 T 11-10-2018 IPR003607 HD/PDEase domain SYN_01428 6c2ddf5f0d569ecb725f9093d4d76894 660 SUPERFAMILY SSF109604 496 656 2.51E-26 T 11-10-2018 SYN_01428 6c2ddf5f0d569ecb725f9093d4d76894 660 Pfam PF13487 HD domain 547 608 2.6E-16 T 11-10-2018 SYN_01428 6c2ddf5f0d569ecb725f9093d4d76894 660 SMART SM00044 169 351 4.1E-35 T 11-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 SYN_01428 6c2ddf5f0d569ecb725f9093d4d76894 660 Gene3D G3DSA:1.10.3210.10 395 659 4.8E-52 T 11-10-2018 SYN_01428 6c2ddf5f0d569ecb725f9093d4d76894 660 Gene3D G3DSA:3.30.70.1230 191 373 1.4E-49 T 11-10-2018 IPR029787 Nucleotide cyclase SYN_01428 6c2ddf5f0d569ecb725f9093d4d76894 660 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 198 345 3.3E-33 T 11-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 SYN_01428 6c2ddf5f0d569ecb725f9093d4d76894 660 SUPERFAMILY SSF48452 370 432 5.8E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_01428 6c2ddf5f0d569ecb725f9093d4d76894 660 SUPERFAMILY SSF55073 194 347 8.48E-46 T 11-10-2018 IPR029787 Nucleotide cyclase SYN_02832 3b5282da0dca336f319536db7168f0d0 354 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 11 33 5.9E-40 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SYN_02832 3b5282da0dca336f319536db7168f0d0 354 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 303 324 5.9E-40 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SYN_02832 3b5282da0dca336f319536db7168f0d0 354 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 209 227 5.9E-40 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SYN_02832 3b5282da0dca336f319536db7168f0d0 354 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 273 288 5.9E-40 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SYN_02832 3b5282da0dca336f319536db7168f0d0 354 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 229 246 5.9E-40 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SYN_02832 3b5282da0dca336f319536db7168f0d0 354 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 353 2.8E-127 T 11-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 SYN_02832 3b5282da0dca336f319536db7168f0d0 354 Gene3D G3DSA:3.40.1690.10 219 354 3.1E-55 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal SYN_02832 3b5282da0dca336f319536db7168f0d0 354 SUPERFAMILY SSF160544 245 352 1.44E-40 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal SYN_02832 3b5282da0dca336f319536db7168f0d0 354 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 348 4.3E-131 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SYN_00631 871ff048aa6c371b992bbe93fc01f266 574 SMART SM00928 486 531 5.5E-21 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00631 871ff048aa6c371b992bbe93fc01f266 574 SUPERFAMILY SSF142984 400 481 1.31E-19 T 11-10-2018 SYN_00631 871ff048aa6c371b992bbe93fc01f266 574 Gene3D G3DSA:3.40.30.10 74 173 3.4E-26 T 11-10-2018 SYN_00631 871ff048aa6c371b992bbe93fc01f266 574 Pfam PF10531 SLBB domain 403 445 9.8E-8 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00631 871ff048aa6c371b992bbe93fc01f266 574 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 499 510 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00631 871ff048aa6c371b992bbe93fc01f266 574 Gene3D G3DSA:1.10.10.1590 2 72 1.5E-14 T 11-10-2018 SYN_00631 871ff048aa6c371b992bbe93fc01f266 574 Gene3D G3DSA:3.40.50.11540 220 390 5.7E-76 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00631 871ff048aa6c371b992bbe93fc01f266 574 SUPERFAMILY SSF52833 3 167 1.12E-41 T 11-10-2018 IPR036249 Thioredoxin-like superfamily SYN_00631 871ff048aa6c371b992bbe93fc01f266 574 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 11 155 3.7E-43 T 11-10-2018 SYN_00631 871ff048aa6c371b992bbe93fc01f266 574 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 10 155 7.3E-44 T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00631 871ff048aa6c371b992bbe93fc01f266 574 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 326 341 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00631 871ff048aa6c371b992bbe93fc01f266 574 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 215 378 1.5E-50 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00631 871ff048aa6c371b992bbe93fc01f266 574 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 488 570 8.1E-25 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00631 871ff048aa6c371b992bbe93fc01f266 574 SUPERFAMILY SSF140490 483 573 2.09E-28 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00631 871ff048aa6c371b992bbe93fc01f266 574 Gene3D G3DSA:1.20.1440.230 484 574 1.3E-26 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00631 871ff048aa6c371b992bbe93fc01f266 574 Gene3D G3DSA:3.10.20.600 391 483 3.1E-28 T 11-10-2018 SYN_00631 871ff048aa6c371b992bbe93fc01f266 574 SUPERFAMILY SSF142019 173 398 7.19E-82 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_01482 f3398a5e0f1d05beb2ae93ad78a2b2fd 661 Hamap MF_01201 Alanine racemase. 8 375 32.234 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SYN_01482 f3398a5e0f1d05beb2ae93ad78a2b2fd 661 Gene3D G3DSA:3.20.20.10 17 230 6.7E-127 T 11-10-2018 IPR029066 PLP-binding barrel SYN_01482 f3398a5e0f1d05beb2ae93ad78a2b2fd 661 Gene3D G3DSA:2.40.37.10 12 374 6.7E-127 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 SYN_01482 f3398a5e0f1d05beb2ae93ad78a2b2fd 661 Pfam PF01168 Alanine racemase, N-terminal domain 15 234 1.2E-61 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SYN_01482 f3398a5e0f1d05beb2ae93ad78a2b2fd 661 SUPERFAMILY SSF51419 15 248 3.01E-61 T 11-10-2018 IPR029066 PLP-binding barrel SYN_01482 f3398a5e0f1d05beb2ae93ad78a2b2fd 661 TIGRFAM TIGR00492 alr: alanine racemase 11 375 7.5E-102 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SYN_01482 f3398a5e0f1d05beb2ae93ad78a2b2fd 661 SMART SM01005 247 375 3.4E-68 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SYN_01482 f3398a5e0f1d05beb2ae93ad78a2b2fd 661 SUPERFAMILY SSF50621 242 379 3.0E-50 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 SYN_01482 f3398a5e0f1d05beb2ae93ad78a2b2fd 661 Pfam PF00842 Alanine racemase, C-terminal domain 247 373 1.3E-43 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SYN_01482 f3398a5e0f1d05beb2ae93ad78a2b2fd 661 PRINTS PR00992 Alanine racemase signature 165 176 3.9E-55 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SYN_01482 f3398a5e0f1d05beb2ae93ad78a2b2fd 661 PRINTS PR00992 Alanine racemase signature 207 234 3.9E-55 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SYN_01482 f3398a5e0f1d05beb2ae93ad78a2b2fd 661 PRINTS PR00992 Alanine racemase signature 301 318 3.9E-55 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SYN_01482 f3398a5e0f1d05beb2ae93ad78a2b2fd 661 PRINTS PR00992 Alanine racemase signature 280 295 3.9E-55 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SYN_01482 f3398a5e0f1d05beb2ae93ad78a2b2fd 661 PRINTS PR00992 Alanine racemase signature 131 143 3.9E-55 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SYN_01482 f3398a5e0f1d05beb2ae93ad78a2b2fd 661 PRINTS PR00992 Alanine racemase signature 263 278 3.9E-55 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SYN_01482 f3398a5e0f1d05beb2ae93ad78a2b2fd 661 PRINTS PR00992 Alanine racemase signature 34 50 3.9E-55 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SYN_01482 f3398a5e0f1d05beb2ae93ad78a2b2fd 661 PRINTS PR00992 Alanine racemase signature 70 88 3.9E-55 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SYN_01482 f3398a5e0f1d05beb2ae93ad78a2b2fd 661 PRINTS PR00992 Alanine racemase signature 357 370 3.9E-55 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SYN_01482 f3398a5e0f1d05beb2ae93ad78a2b2fd 661 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 40 49 - T 11-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SYN_02903 ca614cd4bd96c6668a71003be8862863 275 Gene3D G3DSA:3.90.550.10 42 272 3.9E-44 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_02903 ca614cd4bd96c6668a71003be8862863 275 SUPERFAMILY SSF53448 42 269 2.25E-46 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_02903 ca614cd4bd96c6668a71003be8862863 275 Pfam PF00483 Nucleotidyl transferase 43 269 3.1E-19 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 SYN_02850 1b6b38720495c956e3d54036c6adf446 330 Gene3D G3DSA:3.20.20.70 38 318 1.7E-93 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_02850 1b6b38720495c956e3d54036c6adf446 330 Gene3D G3DSA:2.30.26.10 81 242 1.7E-93 T 11-10-2018 IPR023359 Dihydroorotate dehydrogenase A, chain A, domain 2 SYN_02850 1b6b38720495c956e3d54036c6adf446 330 SUPERFAMILY SSF51395 27 326 1.8E-88 T 11-10-2018 SYN_02850 1b6b38720495c956e3d54036c6adf446 330 PIRSF PIRSF000164 2 329 2.3E-88 T 11-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 SYN_02850 1b6b38720495c956e3d54036c6adf446 330 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 66 85 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 SYN_02850 1b6b38720495c956e3d54036c6adf446 330 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 30 326 2.7E-114 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 SYN_02850 1b6b38720495c956e3d54036c6adf446 330 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 265 285 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 SYN_02850 1b6b38720495c956e3d54036c6adf446 330 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 30 327 41.137 T 11-10-2018 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 SYN_02850 1b6b38720495c956e3d54036c6adf446 330 Pfam PF01180 Dihydroorotate dehydrogenase 30 312 4.1E-73 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 SYN_00604 6003bdc05e81e9d1fbc7ad0b12a537cf 263 Pfam PF09163 Formate dehydrogenase N, transmembrane 213 255 6.6E-16 T 11-10-2018 IPR015246 Formate dehydrogenase, transmembrane SYN_00604 6003bdc05e81e9d1fbc7ad0b12a537cf 263 SUPERFAMILY SSF81597 213 255 3.92E-10 T 11-10-2018 SYN_00604 6003bdc05e81e9d1fbc7ad0b12a537cf 263 Pfam PF12800 4Fe-4S binding domain 12 25 0.46 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_00604 6003bdc05e81e9d1fbc7ad0b12a537cf 263 Gene3D G3DSA:3.30.70.20 73 135 8.9E-69 T 11-10-2018 SYN_00604 6003bdc05e81e9d1fbc7ad0b12a537cf 263 Pfam PF13247 4Fe-4S dicluster domain 65 161 1.3E-25 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_00604 6003bdc05e81e9d1fbc7ad0b12a537cf 263 SUPERFAMILY SSF54862 1 217 1.36E-65 T 11-10-2018 SYN_00604 6003bdc05e81e9d1fbc7ad0b12a537cf 263 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 106 117 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_00604 6003bdc05e81e9d1fbc7ad0b12a537cf 263 PIRSF PIRSF036298 1 262 1.4E-96 T 11-10-2018 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 SYN_00604 6003bdc05e81e9d1fbc7ad0b12a537cf 263 Gene3D G3DSA:1.20.5.480 215 260 2.7E-8 T 11-10-2018 IPR038384 Formate dehydrogenase, C-terminal domain superfamily SYN_00604 6003bdc05e81e9d1fbc7ad0b12a537cf 263 Gene3D G3DSA:3.30.70.20 4 196 8.9E-69 T 11-10-2018 SYN_01130 adcdc255979ef8ce1d69c6160cbeca26 331 Gene3D G3DSA:3.40.50.720 11 307 6.9E-89 T 11-10-2018 SYN_01130 adcdc255979ef8ce1d69c6160cbeca26 331 Pfam PF16363 GDP-mannose 4,6 dehydratase 11 312 1.1E-68 T 11-10-2018 IPR016040 NAD(P)-binding domain SYN_01130 adcdc255979ef8ce1d69c6160cbeca26 331 SUPERFAMILY SSF51735 3 323 7.79E-93 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_01130 adcdc255979ef8ce1d69c6160cbeca26 331 PRINTS PR01713 Nucleotide sugar epimerase signature 217 232 3.0E-5 T 11-10-2018 SYN_01130 adcdc255979ef8ce1d69c6160cbeca26 331 PRINTS PR01713 Nucleotide sugar epimerase signature 240 255 3.0E-5 T 11-10-2018 SYN_01130 adcdc255979ef8ce1d69c6160cbeca26 331 PRINTS PR01713 Nucleotide sugar epimerase signature 283 300 3.0E-5 T 11-10-2018 SYN_01130 adcdc255979ef8ce1d69c6160cbeca26 331 Gene3D G3DSA:3.90.25.10 187 318 6.9E-89 T 11-10-2018 SYN_01287 21f7fedfc56e00d78ad6dd1b240e9a67 485 Gene3D G3DSA:3.60.15.10 32 274 5.6E-65 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_01287 21f7fedfc56e00d78ad6dd1b240e9a67 485 Gene3D G3DSA:3.40.250.10 278 369 1.4E-10 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily SYN_01287 21f7fedfc56e00d78ad6dd1b240e9a67 485 SMART SM00450 387 483 5.8E-11 T 11-10-2018 IPR001763 Rhodanese-like domain SYN_01287 21f7fedfc56e00d78ad6dd1b240e9a67 485 SMART SM00450 283 379 2.2 T 11-10-2018 IPR001763 Rhodanese-like domain SYN_01287 21f7fedfc56e00d78ad6dd1b240e9a67 485 Pfam PF00753 Metallo-beta-lactamase superfamily 45 212 8.5E-13 T 11-10-2018 IPR001279 Metallo-beta-lactamase SYN_01287 21f7fedfc56e00d78ad6dd1b240e9a67 485 SUPERFAMILY SSF52821 258 379 2.62E-14 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily SYN_01287 21f7fedfc56e00d78ad6dd1b240e9a67 485 SUPERFAMILY SSF56281 45 250 2.24E-46 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_01287 21f7fedfc56e00d78ad6dd1b240e9a67 485 Gene3D G3DSA:3.40.250.10 379 485 4.5E-20 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily SYN_01287 21f7fedfc56e00d78ad6dd1b240e9a67 485 Pfam PF00581 Rhodanese-like domain 392 479 1.0E-8 T 11-10-2018 IPR001763 Rhodanese-like domain SYN_01287 21f7fedfc56e00d78ad6dd1b240e9a67 485 SUPERFAMILY SSF52821 380 479 2.23E-25 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily SYN_01287 21f7fedfc56e00d78ad6dd1b240e9a67 485 SMART SM00849 45 212 4.9E-27 T 11-10-2018 IPR001279 Metallo-beta-lactamase SYN_01214 f3e578a3ff03866528fcc66488ee5647 441 Gene3D G3DSA:3.40.50.300 112 302 1.3E-8 T 11-10-2018 SYN_01214 f3e578a3ff03866528fcc66488ee5647 441 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 250 296 1.4E-4 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain SYN_01214 f3e578a3ff03866528fcc66488ee5647 441 SUPERFAMILY SSF52540 130 306 2.66E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00773 d4424722e1761307f576a0d65f519baa 263 Pfam PF01061 ABC-2 type transporter 13 225 2.9E-29 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 SYN_00773 d4424722e1761307f576a0d65f519baa 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 205 224 6.6E-24 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 SYN_00773 d4424722e1761307f576a0d65f519baa 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 111 136 6.6E-24 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 SYN_00773 d4424722e1761307f576a0d65f519baa 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 185 204 6.6E-24 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 SYN_00773 d4424722e1761307f576a0d65f519baa 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 32 53 6.6E-24 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 SYN_00773 d4424722e1761307f576a0d65f519baa 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 148 172 6.6E-24 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 SYN_00773 d4424722e1761307f576a0d65f519baa 263 PIRSF PIRSF006648 1 262 1.3E-31 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 SYN_02646 be58984f6e0a188ab915308eb313e9a3 122 TIGRFAM TIGR04176 MarR_EPS: EPS-associated transcriptional regulator, MarR family 11 112 4.0E-44 T 11-10-2018 IPR026433 EPS-associated transcriptional regulator, MarR family SYN_02646 be58984f6e0a188ab915308eb313e9a3 122 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 57 7.6E-10 T 11-10-2018 SYN_02646 be58984f6e0a188ab915308eb313e9a3 122 SUPERFAMILY SSF46785 12 91 1.77E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_02646 be58984f6e0a188ab915308eb313e9a3 122 Gene3D G3DSA:1.10.10.10 2 115 6.9E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_01251 3b0124bc5b947e0d5b203f58e8bf3e7f 390 PIRSF PIRSF005572 1 381 1.1E-129 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 SYN_01251 3b0124bc5b947e0d5b203f58e8bf3e7f 390 Gene3D G3DSA:3.40.640.10 15 256 3.5E-150 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SYN_01251 3b0124bc5b947e0d5b203f58e8bf3e7f 390 Pfam PF00266 Aminotransferase class-V 4 366 1.3E-89 T 11-10-2018 IPR000192 Aminotransferase class V domain SYN_01251 3b0124bc5b947e0d5b203f58e8bf3e7f 390 SUPERFAMILY SSF53383 2 375 1.2E-112 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SYN_01251 3b0124bc5b947e0d5b203f58e8bf3e7f 390 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 390 48.235 T 11-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 SYN_01251 3b0124bc5b947e0d5b203f58e8bf3e7f 390 Gene3D G3DSA:3.90.1150.10 4 373 3.5E-150 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SYN_01251 3b0124bc5b947e0d5b203f58e8bf3e7f 390 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 193 212 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SYN_01251 3b0124bc5b947e0d5b203f58e8bf3e7f 390 TIGRFAM TIGR03402 FeS_nifS: cysteine desulfurase NifS 4 383 6.0E-175 T 11-10-2018 IPR017772 Cysteine desulfurase NifS, bacterial/archaeal GO:0006520|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 SYN_02907 b9daa0345d7b297233f2b537a3cf858b 636 Pfam PF13175 AAA ATPase domain 310 381 7.7E-11 T 11-10-2018 SYN_02907 b9daa0345d7b297233f2b537a3cf858b 636 Pfam PF13175 AAA ATPase domain 1 49 9.5E-15 T 11-10-2018 SYN_02907 b9daa0345d7b297233f2b537a3cf858b 636 Gene3D G3DSA:3.40.50.300 245 412 5.0E-6 T 11-10-2018 SYN_02907 b9daa0345d7b297233f2b537a3cf858b 636 SUPERFAMILY SSF52540 1 385 5.21E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01567 66e694d7ccf8b83c1ecfa26de42dcc45 258 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 15 46 1.6E-8 T 11-10-2018 IPR001451 Hexapeptide repeat SYN_01567 66e694d7ccf8b83c1ecfa26de42dcc45 258 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 104 138 4.0E-8 T 11-10-2018 IPR001451 Hexapeptide repeat SYN_01567 66e694d7ccf8b83c1ecfa26de42dcc45 258 SUPERFAMILY SSF51161 2 257 3.21E-76 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily SYN_01567 66e694d7ccf8b83c1ecfa26de42dcc45 258 Gene3D G3DSA:2.160.10.10 1 192 6.3E-54 T 11-10-2018 SYN_01567 66e694d7ccf8b83c1ecfa26de42dcc45 258 Gene3D G3DSA:1.20.1180.10 193 258 3.2E-25 T 11-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 SYN_01567 66e694d7ccf8b83c1ecfa26de42dcc45 258 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 3 257 1.1E-105 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 SYN_01567 66e694d7ccf8b83c1ecfa26de42dcc45 258 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 175 257 6.5E-32 T 11-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 SYN_01567 66e694d7ccf8b83c1ecfa26de42dcc45 258 PIRSF PIRSF000456 1 258 1.6E-106 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 SYN_01567 66e694d7ccf8b83c1ecfa26de42dcc45 258 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 258 43.995 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 SYN_01098 be4e6009455f032afeabd191212c0709 261 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 63 235 3.1E-54 T 11-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 SYN_01098 be4e6009455f032afeabd191212c0709 261 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 59 235 1.9E-37 T 11-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 SYN_02342 51432b48982d34ac0ed6b7b060076274 492 SUPERFAMILY SSF56024 242 377 1.08E-28 T 11-10-2018 SYN_02342 51432b48982d34ac0ed6b7b060076274 492 Gene3D G3DSA:3.30.870.10 33 215 1.7E-35 T 11-10-2018 SYN_02342 51432b48982d34ac0ed6b7b060076274 492 SUPERFAMILY SSF56024 31 230 3.36E-43 T 11-10-2018 SYN_02342 51432b48982d34ac0ed6b7b060076274 492 Pfam PF13091 PLD-like domain 246 364 3.0E-17 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 SYN_02342 51432b48982d34ac0ed6b7b060076274 492 Pfam PF13091 PLD-like domain 55 156 9.4E-12 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 SYN_02342 51432b48982d34ac0ed6b7b060076274 492 Gene3D G3DSA:3.30.870.10 235 369 7.5E-19 T 11-10-2018 SYN_01911 293a481ca2f582336ed601c414e3d56d 968 SUPERFAMILY SSF52540 27 761 3.19E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01911 293a481ca2f582336ed601c414e3d56d 968 Gene3D G3DSA:3.90.320.10 884 966 1.1E-6 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal SYN_01911 293a481ca2f582336ed601c414e3d56d 968 SUPERFAMILY SSF52980 822 952 7.51E-7 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 SYN_01911 293a481ca2f582336ed601c414e3d56d 968 Pfam PF00580 UvrD/REP helicase N-terminal domain 26 405 6.5E-28 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 SYN_01911 293a481ca2f582336ed601c414e3d56d 968 Pfam PF13361 UvrD-like helicase C-terminal domain 642 756 9.6E-13 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SYN_01911 293a481ca2f582336ed601c414e3d56d 968 Pfam PF12705 PD-(D/E)XK nuclease superfamily 867 963 7.4E-5 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type SYN_01911 293a481ca2f582336ed601c414e3d56d 968 Gene3D G3DSA:3.40.50.300 484 573 1.8E-7 T 11-10-2018 SYN_01911 293a481ca2f582336ed601c414e3d56d 968 Gene3D G3DSA:3.40.50.300 20 156 3.0E-17 T 11-10-2018 SYN_01911 293a481ca2f582336ed601c414e3d56d 968 Gene3D G3DSA:3.40.50.300 290 443 4.1E-21 T 11-10-2018 SYN_01593 afb9d2ab90a89360ff2accf618661e6f 64 Pfam PF00327 Ribosomal protein L30p/L7e 5 55 5.2E-19 T 11-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain SYN_01593 afb9d2ab90a89360ff2accf618661e6f 64 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 19.147 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01593 afb9d2ab90a89360ff2accf618661e6f 64 PIRSF PIRSF002211 1 61 1.1E-25 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01593 afb9d2ab90a89360ff2accf618661e6f 64 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 5.3E-24 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01593 afb9d2ab90a89360ff2accf618661e6f 64 SUPERFAMILY SSF55129 3 60 1.22E-19 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily SYN_01593 afb9d2ab90a89360ff2accf618661e6f 64 Gene3D G3DSA:3.30.1390.20 3 61 2.1E-25 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily SYN_00806 78f1eba0b493a872d27072e8e7fae507 107 Pfam PF04723 Glycine reductase complex selenoprotein A 1 101 3.9E-33 T 11-10-2018 IPR006812 Glycine reductase complex selenoprotein A GO:0030699|GO:0030700|GO:0050485|GO:0055114 SYN_00544 cf2bf9a5e32036f33d2f5162afcfd281 469 SUPERFAMILY SSF52540 82 354 1.49E-92 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00544 cf2bf9a5e32036f33d2f5162afcfd281 469 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 465 1.5E-249 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 SYN_00544 cf2bf9a5e32036f33d2f5162afcfd281 469 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 339 348 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SYN_00544 cf2bf9a5e32036f33d2f5162afcfd281 469 SUPERFAMILY SSF50615 2 80 6.28E-27 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SYN_00544 cf2bf9a5e32036f33d2f5162afcfd281 469 Gene3D G3DSA:2.40.10.170 2 80 2.3E-31 T 11-10-2018 SYN_00544 cf2bf9a5e32036f33d2f5162afcfd281 469 SMART SM00382 147 333 1.3E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00544 cf2bf9a5e32036f33d2f5162afcfd281 469 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 135 348 5.1E-65 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SYN_00544 cf2bf9a5e32036f33d2f5162afcfd281 469 Gene3D G3DSA:1.10.1140.10 351 469 2.5E-57 T 11-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SYN_00544 cf2bf9a5e32036f33d2f5162afcfd281 469 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 78 9.6E-23 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SYN_00544 cf2bf9a5e32036f33d2f5162afcfd281 469 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 466 56.362 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 SYN_00544 cf2bf9a5e32036f33d2f5162afcfd281 469 SUPERFAMILY SSF47917 351 467 3.14E-53 T 11-10-2018 SYN_00544 cf2bf9a5e32036f33d2f5162afcfd281 469 PIRSF PIRSF039072 1 469 2.7E-260 T 11-10-2018 SYN_00544 cf2bf9a5e32036f33d2f5162afcfd281 469 Gene3D G3DSA:3.40.50.300 81 350 4.7E-113 T 11-10-2018 SYN_02922 4f292b3f34daa4d695f096da78ffb5d8 538 Pfam PF00117 Glutamine amidotransferase class-I 301 526 5.0E-58 T 11-10-2018 IPR017926 Glutamine amidotransferase SYN_02922 4f292b3f34daa4d695f096da78ffb5d8 538 SUPERFAMILY SSF52540 3 269 4.66E-122 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02922 4f292b3f34daa4d695f096da78ffb5d8 538 Gene3D G3DSA:3.40.50.880 285 538 1.0E-106 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like SYN_02922 4f292b3f34daa4d695f096da78ffb5d8 538 Hamap MF_01227 CTP synthase [pyrG]. 3 531 52.095 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 SYN_02922 4f292b3f34daa4d695f096da78ffb5d8 538 SUPERFAMILY SSF52317 289 533 1.35E-84 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like SYN_02922 4f292b3f34daa4d695f096da78ffb5d8 538 TIGRFAM TIGR00337 PyrG: CTP synthase 2 526 1.6E-251 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 SYN_02922 4f292b3f34daa4d695f096da78ffb5d8 538 Pfam PF06418 CTP synthase N-terminus 4 266 2.3E-125 T 11-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 SYN_02922 4f292b3f34daa4d695f096da78ffb5d8 538 Gene3D G3DSA:3.40.50.300 1 284 1.8E-129 T 11-10-2018 SYN_01022 a9c6f7518f422b935f1601fafc22caf2 319 Gene3D G3DSA:3.60.15.10 65 317 4.5E-53 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_01022 a9c6f7518f422b935f1601fafc22caf2 319 SUPERFAMILY SSF56281 71 319 8.78E-46 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_01022 a9c6f7518f422b935f1601fafc22caf2 319 Pfam PF12706 Beta-lactamase superfamily domain 102 283 7.4E-22 T 11-10-2018 IPR001279 Metallo-beta-lactamase SYN_02636 512ebcc035c30637451d5b57f28ff694 256 SMART SM00893 23 212 1.2E-67 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 SYN_02636 512ebcc035c30637451d5b57f28ff694 256 Pfam PF01012 Electron transfer flavoprotein domain 26 207 6.0E-55 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 SYN_02636 512ebcc035c30637451d5b57f28ff694 256 PIRSF PIRSF000090 1 256 2.1E-87 T 11-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 SYN_02636 512ebcc035c30637451d5b57f28ff694 256 Gene3D G3DSA:3.40.50.620 1 256 4.9E-91 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_02636 512ebcc035c30637451d5b57f28ff694 256 SUPERFAMILY SSF52402 2 250 3.14E-84 T 11-10-2018 SYN_00622 727c55633f52aac2302c97a8376288c0 748 Gene3D G3DSA:3.40.50.2000 44 258 8.1E-135 T 11-10-2018 SYN_00622 727c55633f52aac2302c97a8376288c0 748 Gene3D G3DSA:3.30.70.1020 580 657 1.6E-45 T 11-10-2018 SYN_00622 727c55633f52aac2302c97a8376288c0 748 Pfam PF00982 Glycosyltransferase family 20 268 476 5.7E-64 T 11-10-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 KEGG: 00500+2.4.1.15 SYN_00622 727c55633f52aac2302c97a8376288c0 748 Pfam PF02358 Trehalose-phosphatase 508 698 6.2E-35 T 11-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 SYN_00622 727c55633f52aac2302c97a8376288c0 748 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 507 697 2.0E-13 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 SYN_00622 727c55633f52aac2302c97a8376288c0 748 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 507 728 3.9E-39 T 11-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 SYN_00622 727c55633f52aac2302c97a8376288c0 748 SUPERFAMILY SSF53756 39 476 1.1E-119 T 11-10-2018 SYN_00622 727c55633f52aac2302c97a8376288c0 748 SUPERFAMILY SSF56784 507 728 1.24E-33 T 11-10-2018 IPR036412 HAD-like superfamily SYN_00622 727c55633f52aac2302c97a8376288c0 748 Gene3D G3DSA:3.40.50.2000 259 457 8.1E-135 T 11-10-2018 SYN_00622 727c55633f52aac2302c97a8376288c0 748 Gene3D G3DSA:3.40.50.1000 507 714 1.6E-45 T 11-10-2018 IPR023214 HAD superfamily SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 SUPERFAMILY SSF50249 454 552 5.82E-26 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 PIRSF PIRSF002111 9 410 8.3E-169 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 PIRSF PIRSF002111 408 567 1.5E-57 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 Pfam PF00575 S1 RNA binding domain 385 458 5.6E-18 T 11-10-2018 IPR003029 S1 domain GO:0003676 SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 Pfam PF00575 S1 RNA binding domain 215 284 1.3E-16 T 11-10-2018 IPR003029 S1 domain GO:0003676 SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 Pfam PF00575 S1 RNA binding domain 133 195 1.2E-8 T 11-10-2018 IPR003029 S1 domain GO:0003676 SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 Pfam PF00575 S1 RNA binding domain 472 544 1.3E-18 T 11-10-2018 IPR003029 S1 domain GO:0003676 SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 Pfam PF00575 S1 RNA binding domain 47 111 1.2E-9 T 11-10-2018 IPR003029 S1 domain GO:0003676 SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 Pfam PF00575 S1 RNA binding domain 299 371 4.1E-20 T 11-10-2018 IPR003029 S1 domain GO:0003676 SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 Gene3D G3DSA:2.40.50.140 32 122 2.0E-18 T 11-10-2018 SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 38 544 6.2E-195 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 SMART SM00316 128 195 7.2E-4 T 11-10-2018 IPR022967 RNA-binding domain, S1 SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 SMART SM00316 386 458 1.8E-22 T 11-10-2018 IPR022967 RNA-binding domain, S1 SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 SMART SM00316 299 371 7.7E-28 T 11-10-2018 IPR022967 RNA-binding domain, S1 SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 SMART SM00316 473 544 3.3E-23 T 11-10-2018 IPR022967 RNA-binding domain, S1 SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 SMART SM00316 214 284 6.7E-25 T 11-10-2018 IPR022967 RNA-binding domain, S1 SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 SMART SM00316 45 112 7.8E-10 T 11-10-2018 IPR022967 RNA-binding domain, S1 SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 SUPERFAMILY SSF50249 366 478 1.12E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 PRINTS PR00681 Ribosomal protein S1 signature 150 167 4.5E-75 T 11-10-2018 SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 PRINTS PR00681 Ribosomal protein S1 signature 354 372 4.5E-75 T 11-10-2018 SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 PRINTS PR00681 Ribosomal protein S1 signature 65 79 4.5E-75 T 11-10-2018 SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 PRINTS PR00681 Ribosomal protein S1 signature 133 149 4.5E-75 T 11-10-2018 SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 PRINTS PR00681 Ribosomal protein S1 signature 109 128 4.5E-75 T 11-10-2018 SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 PRINTS PR00681 Ribosomal protein S1 signature 314 333 4.5E-75 T 11-10-2018 SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 PRINTS PR00681 Ribosomal protein S1 signature 47 65 4.5E-75 T 11-10-2018 SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 PRINTS PR00681 Ribosomal protein S1 signature 179 199 4.5E-75 T 11-10-2018 SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 PRINTS PR00681 Ribosomal protein S1 signature 236 257 4.5E-75 T 11-10-2018 SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 Gene3D G3DSA:2.40.50.140 293 380 5.5E-30 T 11-10-2018 SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 Gene3D G3DSA:2.40.50.140 381 469 5.8E-28 T 11-10-2018 SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 Gene3D G3DSA:2.40.50.140 123 202 3.3E-6 T 11-10-2018 SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 SUPERFAMILY SSF50249 31 137 1.0E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 SUPERFAMILY SSF50249 215 301 1.34E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 Gene3D G3DSA:2.40.50.140 470 554 1.4E-27 T 11-10-2018 SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 Gene3D G3DSA:2.40.50.140 211 292 5.4E-26 T 11-10-2018 SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 SUPERFAMILY SSF50249 279 384 7.46E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_03197 7160c86a3ec60bd4c5c492ef472a2d6d 586 SUPERFAMILY SSF50249 132 208 1.72E-12 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_00318 bc7658d83be56d1c04407457df278744 222 Gene3D G3DSA:3.60.15.10 1 218 4.7E-44 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_00318 bc7658d83be56d1c04407457df278744 222 SMART SM00849 19 197 5.4E-33 T 11-10-2018 IPR001279 Metallo-beta-lactamase SYN_00318 bc7658d83be56d1c04407457df278744 222 SUPERFAMILY SSF56281 2 211 7.31E-44 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_00318 bc7658d83be56d1c04407457df278744 222 Pfam PF00753 Metallo-beta-lactamase superfamily 18 197 6.4E-26 T 11-10-2018 IPR001279 Metallo-beta-lactamase SYN_02050 f1e606deb5c36ddbac9ccb495bd55f0e 372 SMART SM00480 17 368 3.4E-90 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 SYN_02050 f1e606deb5c36ddbac9ccb495bd55f0e 372 SUPERFAMILY SSF55979 129 250 1.57E-20 T 11-10-2018 SYN_02050 f1e606deb5c36ddbac9ccb495bd55f0e 372 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 249 1.4E-20 T 11-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 SYN_02050 f1e606deb5c36ddbac9ccb495bd55f0e 372 Gene3D G3DSA:3.70.10.10 137 370 6.5E-103 T 11-10-2018 SYN_02050 f1e606deb5c36ddbac9ccb495bd55f0e 372 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 118 2.4E-25 T 11-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 SYN_02050 f1e606deb5c36ddbac9ccb495bd55f0e 372 Gene3D G3DSA:3.10.150.10 1 248 6.5E-103 T 11-10-2018 SYN_02050 f1e606deb5c36ddbac9ccb495bd55f0e 372 SUPERFAMILY SSF55979 1 116 5.14E-24 T 11-10-2018 SYN_02050 f1e606deb5c36ddbac9ccb495bd55f0e 372 PIRSF PIRSF000804 1 372 1.7E-119 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 SYN_02050 f1e606deb5c36ddbac9ccb495bd55f0e 372 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 252 370 2.1E-26 T 11-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 SYN_02050 f1e606deb5c36ddbac9ccb495bd55f0e 372 SUPERFAMILY SSF55979 252 372 4.11E-32 T 11-10-2018 SYN_02050 f1e606deb5c36ddbac9ccb495bd55f0e 372 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 372 2.6E-80 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 SYN_03196 cd8b6a371cfc969ddebb589a8084a24b 256 TIGRFAM TIGR00017 cmk: cytidylate kinase 36 250 5.2E-68 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 SYN_03196 cd8b6a371cfc969ddebb589a8084a24b 256 SUPERFAMILY SSF52540 33 253 7.31E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_03196 cd8b6a371cfc969ddebb589a8084a24b 256 Pfam PF02224 Cytidylate kinase 39 252 9.7E-67 T 11-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 SYN_03196 cd8b6a371cfc969ddebb589a8084a24b 256 Hamap MF_00238 Cytidylate kinase [cmk]. 37 255 31.226 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 SYN_03196 cd8b6a371cfc969ddebb589a8084a24b 256 Gene3D G3DSA:3.40.50.300 32 255 4.1E-77 T 11-10-2018 SYN_00611 e4a5d861677d85b8dd2dbd03db47541c 264 Pfam PF12146 Serine aminopeptidase, S33 188 240 1.1E-8 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 SYN_00611 e4a5d861677d85b8dd2dbd03db47541c 264 Pfam PF12146 Serine aminopeptidase, S33 57 164 1.1E-13 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 SYN_00611 e4a5d861677d85b8dd2dbd03db47541c 264 Gene3D G3DSA:3.40.50.1820 32 259 2.7E-36 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold SYN_00611 e4a5d861677d85b8dd2dbd03db47541c 264 SUPERFAMILY SSF53474 33 258 1.99E-41 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold SYN_03219 61af80e7df79eeec3f08fae42ab41806 198 Gene3D G3DSA:3.30.70.20 21 187 4.5E-10 T 11-10-2018 SYN_03219 61af80e7df79eeec3f08fae42ab41806 198 SUPERFAMILY SSF54862 23 161 2.81E-23 T 11-10-2018 SYN_03219 61af80e7df79eeec3f08fae42ab41806 198 Pfam PF12837 4Fe-4S binding domain 23 42 1.1E-5 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_00260 61af80e7df79eeec3f08fae42ab41806 198 Gene3D G3DSA:3.30.70.20 21 187 4.5E-10 T 11-10-2018 SYN_00260 61af80e7df79eeec3f08fae42ab41806 198 SUPERFAMILY SSF54862 23 161 2.81E-23 T 11-10-2018 SYN_00260 61af80e7df79eeec3f08fae42ab41806 198 Pfam PF12837 4Fe-4S binding domain 23 42 1.1E-5 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_03211 95bd8b3f94ed6040bcbb12f2cb836e49 174 Pfam PF13551 Winged helix-turn helix 39 107 3.5E-13 T 11-10-2018 SYN_03211 95bd8b3f94ed6040bcbb12f2cb836e49 174 SUPERFAMILY SSF46689 38 153 1.51E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SYN_01317 95bd8b3f94ed6040bcbb12f2cb836e49 174 Pfam PF13551 Winged helix-turn helix 39 107 3.5E-13 T 11-10-2018 SYN_01317 95bd8b3f94ed6040bcbb12f2cb836e49 174 SUPERFAMILY SSF46689 38 153 1.51E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SYN_00595 665d0652597e96714c9220c243be1e6f 114 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 111 2.8E-26 T 11-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 SYN_00595 665d0652597e96714c9220c243be1e6f 114 PIRSF PIRSF004761 1 114 5.2E-30 T 11-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 SYN_00595 665d0652597e96714c9220c243be1e6f 114 Gene3D G3DSA:3.30.2320.80 1 114 8.2E-30 T 11-10-2018 SYN_00595 665d0652597e96714c9220c243be1e6f 114 Hamap MF_00213 Hydrogenase maturation factor HypA [hypA]. 1 114 20.216 T 11-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 SYN_00595 665d0652597e96714c9220c243be1e6f 114 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 11-10-2018 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site SYN_00595 665d0652597e96714c9220c243be1e6f 114 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 109 3.8E-28 T 11-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 SYN_00578 f1cb570dd572ad673ecde1f8b195bce4 380 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 7 355 3.8E-110 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 SYN_00578 f1cb570dd572ad673ecde1f8b195bce4 380 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 100 3.5E-19 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain SYN_00578 f1cb570dd572ad673ecde1f8b195bce4 380 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 146 358 1.2E-63 T 11-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 SYN_00578 f1cb570dd572ad673ecde1f8b195bce4 380 Gene3D G3DSA:3.40.430.10 141 365 1.2E-70 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 SYN_00578 f1cb570dd572ad673ecde1f8b195bce4 380 Pfam PF01872 RibD C-terminal domain 147 353 2.3E-50 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 SYN_00578 f1cb570dd572ad673ecde1f8b195bce4 380 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 50 88 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 SYN_00578 f1cb570dd572ad673ecde1f8b195bce4 380 PIRSF PIRSF006769 1 362 4.3E-130 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 SYN_00578 f1cb570dd572ad673ecde1f8b195bce4 380 SUPERFAMILY SSF53927 3 142 2.26E-46 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 SYN_00578 f1cb570dd572ad673ecde1f8b195bce4 380 SUPERFAMILY SSF53597 146 356 4.98E-58 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 SYN_00578 f1cb570dd572ad673ecde1f8b195bce4 380 Gene3D G3DSA:3.40.140.10 1 140 1.7E-45 T 11-10-2018 SYN_01478 6cabf3bd486cfc3e11b47752b9934fc9 291 Gene3D G3DSA:3.30.70.120 199 275 4.8E-24 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SYN_01478 6cabf3bd486cfc3e11b47752b9934fc9 291 PIRSF PIRSF006483 11 289 5.4E-80 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT SYN_01478 6cabf3bd486cfc3e11b47752b9934fc9 291 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 228 282 7.7E-21 T 11-10-2018 IPR019264 Domain of unknown function DUF2179 SYN_01478 6cabf3bd486cfc3e11b47752b9934fc9 291 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 21 222 6.8E-53 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT SYN_00884 88523b0b87135787b972899ebc449288 237 SUPERFAMILY SSF89392 48 236 1.53E-36 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX SYN_00884 88523b0b87135787b972899ebc449288 237 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 58 225 2.3E-27 T 11-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like SYN_00884 88523b0b87135787b972899ebc449288 237 Gene3D G3DSA:2.50.20.10 45 235 1.4E-45 T 11-10-2018 SYN_02080 104924fd7dd129f6e1e93da6aa8f5560 310 PIRSF PIRSF000428 6 310 4.6E-36 T 11-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 SYN_02080 104924fd7dd129f6e1e93da6aa8f5560 310 Gene3D G3DSA:3.40.718.10 9 310 1.7E-49 T 11-10-2018 SYN_02080 104924fd7dd129f6e1e93da6aa8f5560 310 Pfam PF01515 Phosphate acetyl/butaryl transferase 89 305 6.5E-13 T 11-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 SYN_02080 104924fd7dd129f6e1e93da6aa8f5560 310 SUPERFAMILY SSF53659 21 308 1.77E-33 T 11-10-2018 SYN_01210 12baad1c144c12be3c1dfb7972bc3bf1 360 Gene3D G3DSA:3.30.420.40 7 356 1.0E-136 T 11-10-2018 SYN_01210 12baad1c144c12be3c1dfb7972bc3bf1 360 SUPERFAMILY SSF53067 122 346 6.95E-50 T 11-10-2018 SYN_01210 12baad1c144c12be3c1dfb7972bc3bf1 360 Pfam PF00871 Acetokinase family 7 311 6.0E-46 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SYN_01210 12baad1c144c12be3c1dfb7972bc3bf1 360 PRINTS PR00471 Acetate kinase family signature 7 18 2.7E-17 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SYN_01210 12baad1c144c12be3c1dfb7972bc3bf1 360 PRINTS PR00471 Acetate kinase family signature 181 202 2.7E-17 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SYN_01210 12baad1c144c12be3c1dfb7972bc3bf1 360 PRINTS PR00471 Acetate kinase family signature 275 288 2.7E-17 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SYN_01210 12baad1c144c12be3c1dfb7972bc3bf1 360 PRINTS PR00471 Acetate kinase family signature 298 314 2.7E-17 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SYN_01210 12baad1c144c12be3c1dfb7972bc3bf1 360 Hamap MF_00542 Probable butyrate kinase [buk]. 1 360 139.374 T 11-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 SYN_01210 12baad1c144c12be3c1dfb7972bc3bf1 360 Gene3D G3DSA:3.30.420.40 139 333 1.0E-136 T 11-10-2018 SYN_01210 12baad1c144c12be3c1dfb7972bc3bf1 360 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 7 18 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SYN_01210 12baad1c144c12be3c1dfb7972bc3bf1 360 SUPERFAMILY SSF53067 6 174 6.15E-56 T 11-10-2018 SYN_01210 12baad1c144c12be3c1dfb7972bc3bf1 360 PIRSF PIRSF036458 3 357 8.3E-131 T 11-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 SYN_01210 12baad1c144c12be3c1dfb7972bc3bf1 360 TIGRFAM TIGR02707 butyr_kinase: butyrate kinase 7 354 6.1E-130 T 11-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 SYN_01210 12baad1c144c12be3c1dfb7972bc3bf1 360 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 181 198 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SYN_00635 dbb36ae1f13ebfcd6f6fcd775a8e7ee8 195 SMART SM00926 47 103 2.7E-18 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00635 dbb36ae1f13ebfcd6f6fcd775a8e7ee8 195 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 48 97 8.9E-16 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00635 dbb36ae1f13ebfcd6f6fcd775a8e7ee8 195 SUPERFAMILY SSF53706 44 195 1.96E-51 T 11-10-2018 SYN_00635 dbb36ae1f13ebfcd6f6fcd775a8e7ee8 195 Gene3D G3DSA:3.40.50.740 107 195 6.7E-35 T 11-10-2018 SYN_00635 dbb36ae1f13ebfcd6f6fcd775a8e7ee8 195 Gene3D G3DSA:2.20.25.90 44 104 2.9E-17 T 11-10-2018 SYN_00857 d104e5a8566f1f2fd2024a437f122e8b 421 Gene3D G3DSA:1.25.10.10 203 368 2.7E-14 T 11-10-2018 IPR011989 Armadillo-like helical SYN_00857 d104e5a8566f1f2fd2024a437f122e8b 421 SUPERFAMILY SSF48371 59 356 4.68E-20 T 11-10-2018 IPR016024 Armadillo-type fold SYN_00857 d104e5a8566f1f2fd2024a437f122e8b 421 Gene3D G3DSA:1.25.10.110 101 191 1.6E-8 T 11-10-2018 SYN_00857 d104e5a8566f1f2fd2024a437f122e8b 421 Pfam PF03130 PBS lyase HEAT-like repeat 127 147 0.12 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 SYN_00857 d104e5a8566f1f2fd2024a437f122e8b 421 Pfam PF13646 HEAT repeats 277 353 7.6E-7 T 11-10-2018 SYN_00857 d104e5a8566f1f2fd2024a437f122e8b 421 SMART SM00567 E-Z type HEAT repeats 283 312 5.5 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 SYN_00857 d104e5a8566f1f2fd2024a437f122e8b 421 SMART SM00567 E-Z type HEAT repeats 314 342 130.0 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 SYN_00857 d104e5a8566f1f2fd2024a437f122e8b 421 SMART SM00567 E-Z type HEAT repeats 118 148 25.0 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 SYN_00432 02a02988e9b423cafbc702ddf75851ef 686 SMART SM00304 317 370 3.2E-14 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SYN_00432 02a02988e9b423cafbc702ddf75851ef 686 SMART SM00283 417 685 8.4E-54 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SYN_00432 02a02988e9b423cafbc702ddf75851ef 686 Gene3D G3DSA:3.30.450.20 165 286 1.8E-27 T 11-10-2018 SYN_00432 02a02988e9b423cafbc702ddf75851ef 686 SUPERFAMILY SSF103190 119 201 1.6E-8 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily SYN_00432 02a02988e9b423cafbc702ddf75851ef 686 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 469 651 1.8E-38 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SYN_00432 02a02988e9b423cafbc702ddf75851ef 686 Pfam PF02743 Cache domain 36 278 3.0E-33 T 11-10-2018 IPR033479 Double Cache domain 1 SYN_00432 02a02988e9b423cafbc702ddf75851ef 686 Gene3D G3DSA:1.10.287.950 370 686 3.0E-61 T 11-10-2018 SYN_00432 02a02988e9b423cafbc702ddf75851ef 686 SUPERFAMILY SSF58104 337 686 4.58E-65 T 11-10-2018 SYN_00432 02a02988e9b423cafbc702ddf75851ef 686 Pfam PF00672 HAMP domain 317 367 3.9E-14 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SYN_00432 02a02988e9b423cafbc702ddf75851ef 686 Gene3D G3DSA:1.20.1480.50 287 369 1.1E-20 T 11-10-2018 SYN_00099 9af12d1a817558a7ba57ad5542808848 644 Pfam PF13185 GAF domain 286 431 6.0E-7 T 11-10-2018 IPR003018 GAF domain GO:0005515 SYN_00099 9af12d1a817558a7ba57ad5542808848 644 Pfam PF01966 HD domain 477 596 1.4E-20 T 11-10-2018 IPR006674 HD domain SYN_00099 9af12d1a817558a7ba57ad5542808848 644 Gene3D G3DSA:3.30.450.20 144 248 2.7E-14 T 11-10-2018 SYN_00099 9af12d1a817558a7ba57ad5542808848 644 Gene3D G3DSA:1.10.3210.10 456 642 1.7E-62 T 11-10-2018 SYN_00099 9af12d1a817558a7ba57ad5542808848 644 Pfam PF13426 PAS domain 154 253 2.5E-7 T 11-10-2018 IPR000014 PAS domain SYN_00099 9af12d1a817558a7ba57ad5542808848 644 Gene3D G3DSA:3.30.450.40 249 455 1.3E-22 T 11-10-2018 IPR029016 GAF-like domain superfamily SYN_00099 9af12d1a817558a7ba57ad5542808848 644 SUPERFAMILY SSF55785 155 264 9.13E-19 T 11-10-2018 IPR035965 PAS domain superfamily SYN_00099 9af12d1a817558a7ba57ad5542808848 644 SUPERFAMILY SSF55781 264 434 8.72E-16 T 11-10-2018 SYN_00099 9af12d1a817558a7ba57ad5542808848 644 SMART SM00091 19 86 8.3E-8 T 11-10-2018 IPR000014 PAS domain SYN_00099 9af12d1a817558a7ba57ad5542808848 644 SMART SM00091 142 208 0.0019 T 11-10-2018 IPR000014 PAS domain SYN_00099 9af12d1a817558a7ba57ad5542808848 644 SMART SM00065 286 440 2.3E-6 T 11-10-2018 IPR003018 GAF domain GO:0005515 SYN_00099 9af12d1a817558a7ba57ad5542808848 644 SUPERFAMILY SSF55785 24 132 1.48E-20 T 11-10-2018 IPR035965 PAS domain superfamily SYN_00099 9af12d1a817558a7ba57ad5542808848 644 SUPERFAMILY SSF109604 453 636 2.2E-35 T 11-10-2018 SYN_00099 9af12d1a817558a7ba57ad5542808848 644 Gene3D G3DSA:3.30.450.20 18 143 1.0E-24 T 11-10-2018 SYN_00099 9af12d1a817558a7ba57ad5542808848 644 TIGRFAM TIGR00277 HDIG: HDIG domain 474 565 3.1E-8 T 11-10-2018 IPR006675 HDIG domain SYN_00099 9af12d1a817558a7ba57ad5542808848 644 SMART SM00471 471 606 2.4E-9 T 11-10-2018 IPR003607 HD/PDEase domain SYN_00099 9af12d1a817558a7ba57ad5542808848 644 SMART SM00086 215 255 9.1 T 11-10-2018 IPR001610 PAC motif SYN_00099 9af12d1a817558a7ba57ad5542808848 644 SMART SM00086 92 130 3.2 T 11-10-2018 IPR001610 PAC motif SYN_00099 9af12d1a817558a7ba57ad5542808848 644 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 143 261 3.3E-17 T 11-10-2018 IPR000014 PAS domain SYN_00099 9af12d1a817558a7ba57ad5542808848 644 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 24 135 1.1E-15 T 11-10-2018 IPR000014 PAS domain SYN_00099 9af12d1a817558a7ba57ad5542808848 644 Pfam PF08447 PAS fold 44 119 5.9E-15 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 SYN_00944 9b8050e783bce076a0fd5cf28c8ae779 209 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 46 126 9.9E-20 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 SYN_00944 9b8050e783bce076a0fd5cf28c8ae779 209 SUPERFAMILY SSF69754 31 131 4.05E-26 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like SYN_00944 9b8050e783bce076a0fd5cf28c8ae779 209 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 151 202 4.8E-19 T 11-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal SYN_00944 9b8050e783bce076a0fd5cf28c8ae779 209 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 31 208 20.527 T 11-10-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid SYN_00944 9b8050e783bce076a0fd5cf28c8ae779 209 Gene3D G3DSA:3.30.160.100 31 125 2.2E-24 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like SYN_00944 9b8050e783bce076a0fd5cf28c8ae779 209 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 33 123 4.1E-19 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 SYN_00944 9b8050e783bce076a0fd5cf28c8ae779 209 Gene3D G3DSA:3.30.505.50 162 208 3.4E-17 T 11-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily SYN_00907 9af96d654c192eb29bb8d8af537feb2f 465 Gene3D G3DSA:3.40.50.2020 258 449 1.5E-76 T 11-10-2018 SYN_00907 9af96d654c192eb29bb8d8af537feb2f 465 SUPERFAMILY SSF56235 3 240 4.12E-28 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal SYN_00907 9af96d654c192eb29bb8d8af537feb2f 465 Pfam PF13537 Glutamine amidotransferase domain 76 197 1.2E-13 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain SYN_00907 9af96d654c192eb29bb8d8af537feb2f 465 SUPERFAMILY SSF53271 234 464 3.96E-34 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like SYN_00907 9af96d654c192eb29bb8d8af537feb2f 465 PIRSF PIRSF000485 1 465 2.5E-104 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 SYN_00907 9af96d654c192eb29bb8d8af537feb2f 465 Gene3D G3DSA:3.60.20.10 3 464 1.5E-76 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal SYN_00495 f01a5b953cd506c3d6ad875fdadf87f8 404 SUPERFAMILY SSF116734 221 403 1.47E-37 T 11-10-2018 SYN_00495 f01a5b953cd506c3d6ad875fdadf87f8 404 Pfam PF01420 Type I restriction modification DNA specificity domain 9 188 1.1E-31 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 SYN_00495 f01a5b953cd506c3d6ad875fdadf87f8 404 Pfam PF01420 Type I restriction modification DNA specificity domain 227 356 3.3E-20 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 SYN_00495 f01a5b953cd506c3d6ad875fdadf87f8 404 Gene3D G3DSA:3.90.220.20 8 398 1.8E-70 T 11-10-2018 SYN_00495 f01a5b953cd506c3d6ad875fdadf87f8 404 Gene3D G3DSA:3.90.220.20 231 351 1.8E-70 T 11-10-2018 SYN_00495 f01a5b953cd506c3d6ad875fdadf87f8 404 Gene3D G3DSA:1.10.287.1120 156 394 1.8E-70 T 11-10-2018 SYN_00495 f01a5b953cd506c3d6ad875fdadf87f8 404 SUPERFAMILY SSF116734 8 201 4.58E-45 T 11-10-2018 SYN_01692 c2d054d81e3dc4a980361611092f6f8d 274 Pfam PF01553 Acyltransferase 48 181 1.1E-14 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 SYN_01692 c2d054d81e3dc4a980361611092f6f8d 274 SUPERFAMILY SSF69593 13 216 1.26E-17 T 11-10-2018 SYN_01692 c2d054d81e3dc4a980361611092f6f8d 274 SMART SM00563 59 188 1.3E-12 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 SYN_02019 c22a3f5c2b83b9bf4ed7cfb2caf48c3d 93 SUPERFAMILY SSF47729 3 92 5.3E-26 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 SYN_02019 c22a3f5c2b83b9bf4ed7cfb2caf48c3d 93 Pfam PF00216 Bacterial DNA-binding protein 3 92 4.1E-28 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SYN_02019 c22a3f5c2b83b9bf4ed7cfb2caf48c3d 93 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 2.9E-9 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SYN_02019 c22a3f5c2b83b9bf4ed7cfb2caf48c3d 93 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 2.9E-9 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SYN_02019 c22a3f5c2b83b9bf4ed7cfb2caf48c3d 93 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 2.9E-9 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SYN_02019 c22a3f5c2b83b9bf4ed7cfb2caf48c3d 93 Gene3D G3DSA:4.10.520.10 1 93 1.3E-28 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 SYN_02019 c22a3f5c2b83b9bf4ed7cfb2caf48c3d 93 SMART SM00411 3 92 2.3E-25 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SYN_00782 20ca7d434672b87b8e19f92606e4be4e 188 Gene3D G3DSA:3.30.1950.10 36 99 3.6E-10 T 11-10-2018 SYN_00782 20ca7d434672b87b8e19f92606e4be4e 188 Pfam PF02563 Polysaccharide biosynthesis/export protein 27 100 9.0E-19 T 11-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 SYN_00782 20ca7d434672b87b8e19f92606e4be4e 188 Pfam PF10531 SLBB domain 108 160 2.2E-8 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00782 20ca7d434672b87b8e19f92606e4be4e 188 Gene3D G3DSA:3.10.560.10 100 188 4.3E-19 T 11-10-2018 SYN_01926 c708f2bbd7a47f61ad36f8f4f528fe5f 338 Pfam PF03741 Integral membrane protein TerC family 69 272 1.3E-58 T 11-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 SYN_01926 c708f2bbd7a47f61ad36f8f4f528fe5f 338 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 4 304 2.3E-123 T 11-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 SYN_01571 5cb5df07ebf5eef7e21486017eafb044 394 SUPERFAMILY SSF56601 71 365 6.95E-57 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like SYN_01571 5cb5df07ebf5eef7e21486017eafb044 394 Pfam PF13354 Beta-lactamase enzyme family 90 329 8.6E-44 T 11-10-2018 SYN_01571 5cb5df07ebf5eef7e21486017eafb044 394 PRINTS PR00118 Beta-lactamase class A signature 146 171 1.1E-13 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 SYN_01571 5cb5df07ebf5eef7e21486017eafb044 394 PRINTS PR00118 Beta-lactamase class A signature 297 312 1.1E-13 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 SYN_01571 5cb5df07ebf5eef7e21486017eafb044 394 PRINTS PR00118 Beta-lactamase class A signature 101 118 1.1E-13 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 SYN_01571 5cb5df07ebf5eef7e21486017eafb044 394 PRINTS PR00118 Beta-lactamase class A signature 244 269 1.1E-13 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 SYN_01571 5cb5df07ebf5eef7e21486017eafb044 394 PRINTS PR00118 Beta-lactamase class A signature 70 94 1.1E-13 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 SYN_00291 03878be1496facada00989efbe0869c5 173 Pfam PF00075 RNase H 22 161 6.0E-44 T 11-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 SYN_00291 03878be1496facada00989efbe0869c5 173 SUPERFAMILY SSF53098 22 162 2.66E-54 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily SYN_00291 03878be1496facada00989efbe0869c5 173 Gene3D G3DSA:3.30.420.10 17 169 2.0E-54 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 SYN_00291 03878be1496facada00989efbe0869c5 173 Hamap MF_00042 Ribonuclease H [rnhA]. 21 170 30.083 T 11-10-2018 IPR022892 Ribonuclease HI GO:0004523 SYN_00090 cdd3316856e6bfd11cfea116d7217466 516 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 5 511 44.004 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SYN_00090 cdd3316856e6bfd11cfea116d7217466 516 SUPERFAMILY SSF110921 393 501 1.83E-26 T 11-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SYN_00090 cdd3316856e6bfd11cfea116d7217466 516 Pfam PF08502 LeuA allosteric (dimerisation) domain 373 501 1.1E-36 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SYN_00090 cdd3316856e6bfd11cfea116d7217466 516 SUPERFAMILY SSF51569 5 294 3.85E-101 T 11-10-2018 SYN_00090 cdd3316856e6bfd11cfea116d7217466 516 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 7 499 1.1E-224 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SYN_00090 cdd3316856e6bfd11cfea116d7217466 516 Gene3D G3DSA:3.30.160.270 400 502 9.2E-11 T 11-10-2018 SYN_00090 cdd3316856e6bfd11cfea116d7217466 516 SMART SM00917 372 502 1.0E-39 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SYN_00090 cdd3316856e6bfd11cfea116d7217466 516 Gene3D G3DSA:3.20.20.70 4 279 7.3E-115 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_00090 cdd3316856e6bfd11cfea116d7217466 516 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 15 31 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SYN_00090 cdd3316856e6bfd11cfea116d7217466 516 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 202 215 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 SYN_00090 cdd3316856e6bfd11cfea116d7217466 516 Pfam PF00682 HMGL-like 7 275 1.5E-97 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 SYN_00090 cdd3316856e6bfd11cfea116d7217466 516 Gene3D G3DSA:1.10.238.260 283 399 8.5E-39 T 11-10-2018 SYN_03717 0b2c9e475a4d79e813c119ee78da34ff 169 SUPERFAMILY SSF52402 12 168 4.77E-19 T 11-10-2018 SYN_03717 0b2c9e475a4d79e813c119ee78da34ff 169 Pfam PF00582 Universal stress protein family 12 168 8.7E-15 T 11-10-2018 IPR006016 UspA SYN_03717 0b2c9e475a4d79e813c119ee78da34ff 169 PRINTS PR01438 Universal stress protein signature 13 31 1.8E-8 T 11-10-2018 IPR006015 Universal stress protein A SYN_03717 0b2c9e475a4d79e813c119ee78da34ff 169 PRINTS PR01438 Universal stress protein signature 146 168 1.8E-8 T 11-10-2018 IPR006015 Universal stress protein A SYN_03717 0b2c9e475a4d79e813c119ee78da34ff 169 PRINTS PR01438 Universal stress protein signature 128 140 1.8E-8 T 11-10-2018 IPR006015 Universal stress protein A SYN_03717 0b2c9e475a4d79e813c119ee78da34ff 169 Gene3D G3DSA:3.40.50.620 10 169 1.3E-22 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_02974 617c2ba2c1ac0b006cc891a25177c60c 250 SUPERFAMILY SSF75625 3 248 1.07E-95 T 11-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SYN_02974 617c2ba2c1ac0b006cc891a25177c60c 250 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 240 36.558 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SYN_02974 617c2ba2c1ac0b006cc891a25177c60c 250 Pfam PF01709 Transcriptional regulator 5 238 1.6E-99 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SYN_02974 617c2ba2c1ac0b006cc891a25177c60c 250 Gene3D G3DSA:1.10.10.200 1 79 3.1E-33 T 11-10-2018 IPR017856 Integrase-like, N-terminal SYN_02974 617c2ba2c1ac0b006cc891a25177c60c 250 Gene3D G3DSA:3.30.70.980 86 237 1.6E-58 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SYN_02974 617c2ba2c1ac0b006cc891a25177c60c 250 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 238 1.9E-101 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SYN_02974 617c2ba2c1ac0b006cc891a25177c60c 250 Gene3D G3DSA:3.30.70.980 131 206 1.6E-58 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 SYN_00107 bad9a90ab2ed3cd2165333d190ffc0df 238 Pfam PF01259 SAICAR synthetase 17 226 1.0E-29 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SYN_00107 bad9a90ab2ed3cd2165333d190ffc0df 238 Gene3D G3DSA:3.30.200.20 9 111 1.2E-22 T 11-10-2018 SYN_00107 bad9a90ab2ed3cd2165333d190ffc0df 238 Gene3D G3DSA:3.30.470.20 112 230 7.6E-31 T 11-10-2018 SYN_00107 bad9a90ab2ed3cd2165333d190ffc0df 238 SUPERFAMILY SSF56104 16 229 1.5E-48 T 11-10-2018 SYN_03514 48c3508f39a9cc68ea2ffd11cf0fc024 166 Pfam PF13637 Ankyrin repeats (many copies) 70 121 9.4E-12 T 11-10-2018 SYN_03514 48c3508f39a9cc68ea2ffd11cf0fc024 166 SMART SM00248 100 129 1.3E-4 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 SYN_03514 48c3508f39a9cc68ea2ffd11cf0fc024 166 SMART SM00248 36 65 24.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 SYN_03514 48c3508f39a9cc68ea2ffd11cf0fc024 166 SMART SM00248 67 96 4.2E-4 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 SYN_03514 48c3508f39a9cc68ea2ffd11cf0fc024 166 Gene3D G3DSA:1.25.40.20 37 105 3.5E-19 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily SYN_03514 48c3508f39a9cc68ea2ffd11cf0fc024 166 SUPERFAMILY SSF48403 38 141 4.2E-29 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily SYN_03514 48c3508f39a9cc68ea2ffd11cf0fc024 166 Gene3D G3DSA:1.25.40.960 106 159 7.1E-13 T 11-10-2018 SYN_01627 a498eb6d2a9ca2f84cef52564ad73c44 401 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 22 393 47.737 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_01627 a498eb6d2a9ca2f84cef52564ad73c44 401 PRINTS PR00096 Glutamine amidotransferase superfamily signature 364 377 1.1E-12 T 11-10-2018 SYN_01627 a498eb6d2a9ca2f84cef52564ad73c44 401 PRINTS PR00096 Glutamine amidotransferase superfamily signature 252 261 1.1E-12 T 11-10-2018 SYN_01627 a498eb6d2a9ca2f84cef52564ad73c44 401 PRINTS PR00096 Glutamine amidotransferase superfamily signature 279 290 1.1E-12 T 11-10-2018 SYN_01627 a498eb6d2a9ca2f84cef52564ad73c44 401 Pfam PF00117 Glutamine amidotransferase class-I 212 387 1.7E-44 T 11-10-2018 IPR017926 Glutamine amidotransferase SYN_01627 a498eb6d2a9ca2f84cef52564ad73c44 401 PRINTS PR00097 Anthranilate synthase component II signature 364 377 1.4E-7 T 11-10-2018 SYN_01627 a498eb6d2a9ca2f84cef52564ad73c44 401 PRINTS PR00097 Anthranilate synthase component II signature 279 290 1.4E-7 T 11-10-2018 SYN_01627 a498eb6d2a9ca2f84cef52564ad73c44 401 PRINTS PR00097 Anthranilate synthase component II signature 252 261 1.4E-7 T 11-10-2018 SYN_01627 a498eb6d2a9ca2f84cef52564ad73c44 401 Gene3D G3DSA:3.50.30.20 21 169 1.2E-55 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_01627 a498eb6d2a9ca2f84cef52564ad73c44 401 SMART SM01097 22 152 2.5E-84 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_01627 a498eb6d2a9ca2f84cef52564ad73c44 401 SUPERFAMILY SSF52317 200 391 3.7E-58 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like SYN_01627 a498eb6d2a9ca2f84cef52564ad73c44 401 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 24 151 3.2E-50 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_01627 a498eb6d2a9ca2f84cef52564ad73c44 401 Gene3D G3DSA:3.40.50.880 170 392 3.2E-67 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like SYN_01627 a498eb6d2a9ca2f84cef52564ad73c44 401 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 210 224 7.0E-37 T 11-10-2018 SYN_01627 a498eb6d2a9ca2f84cef52564ad73c44 401 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 279 295 7.0E-37 T 11-10-2018 SYN_01627 a498eb6d2a9ca2f84cef52564ad73c44 401 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 249 263 7.0E-37 T 11-10-2018 SYN_01627 a498eb6d2a9ca2f84cef52564ad73c44 401 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 321 332 7.0E-37 T 11-10-2018 SYN_01627 a498eb6d2a9ca2f84cef52564ad73c44 401 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 296 313 7.0E-37 T 11-10-2018 SYN_01627 a498eb6d2a9ca2f84cef52564ad73c44 401 SUPERFAMILY SSF52021 23 168 2.35E-54 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_01627 a498eb6d2a9ca2f84cef52564ad73c44 401 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 24 390 1.2E-145 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_01559 364a7aeecd58afadc4ee477f48e54707 159 SUPERFAMILY SSF55620 35 157 4.78E-39 T 11-10-2018 SYN_01559 364a7aeecd58afadc4ee477f48e54707 159 Gene3D G3DSA:3.30.479.10 33 159 8.4E-39 T 11-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 SYN_01559 364a7aeecd58afadc4ee477f48e54707 159 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 39 158 4.2E-40 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 SYN_01559 364a7aeecd58afadc4ee477f48e54707 159 PIRSF PIRSF006113 37 159 3.0E-26 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 SYN_01559 364a7aeecd58afadc4ee477f48e54707 159 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 39 131 5.6E-30 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 SYN_02952 03970ea1216a5529255b70db5dd33096 475 SUPERFAMILY SSF50800 74 168 4.01E-26 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily SYN_02952 03970ea1216a5529255b70db5dd33096 475 PRINTS PR01050 Pyruvate kinase family signature 63 79 5.4E-63 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SYN_02952 03970ea1216a5529255b70db5dd33096 475 PRINTS PR01050 Pyruvate kinase family signature 270 294 5.4E-63 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SYN_02952 03970ea1216a5529255b70db5dd33096 475 PRINTS PR01050 Pyruvate kinase family signature 295 313 5.4E-63 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SYN_02952 03970ea1216a5529255b70db5dd33096 475 PRINTS PR01050 Pyruvate kinase family signature 245 269 5.4E-63 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SYN_02952 03970ea1216a5529255b70db5dd33096 475 PRINTS PR01050 Pyruvate kinase family signature 218 244 5.4E-63 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SYN_02952 03970ea1216a5529255b70db5dd33096 475 PRINTS PR01050 Pyruvate kinase family signature 314 330 5.4E-63 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SYN_02952 03970ea1216a5529255b70db5dd33096 475 PRINTS PR01050 Pyruvate kinase family signature 188 202 5.4E-63 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SYN_02952 03970ea1216a5529255b70db5dd33096 475 Pfam PF00224 Pyruvate kinase, barrel domain 7 339 6.9E-118 T 11-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SYN_02952 03970ea1216a5529255b70db5dd33096 475 Pfam PF02887 Pyruvate kinase, alpha/beta domain 368 440 3.4E-9 T 11-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SYN_02952 03970ea1216a5529255b70db5dd33096 475 SUPERFAMILY SSF52935 324 465 8.39E-16 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SYN_02952 03970ea1216a5529255b70db5dd33096 475 SUPERFAMILY SSF51621 5 340 2.23E-91 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 SYN_02952 03970ea1216a5529255b70db5dd33096 475 Gene3D G3DSA:3.20.20.60 7 336 8.3E-154 T 11-10-2018 SYN_02952 03970ea1216a5529255b70db5dd33096 475 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 7 433 7.9E-151 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SYN_02952 03970ea1216a5529255b70db5dd33096 475 Gene3D G3DSA:2.40.33.10 74 170 8.3E-154 T 11-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SYN_02952 03970ea1216a5529255b70db5dd33096 475 Gene3D G3DSA:3.40.1380.20 337 441 8.3E-154 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SYN_01711 f378651316798ef54b04a74eb30405fe 568 Gene3D G3DSA:3.40.50.970 1 182 5.7E-73 T 11-10-2018 SYN_01711 f378651316798ef54b04a74eb30405fe 568 SUPERFAMILY SSF52518 366 559 2.4E-71 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold SYN_01711 f378651316798ef54b04a74eb30405fe 568 SUPERFAMILY SSF52518 2 184 1.72E-65 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold SYN_01711 f378651316798ef54b04a74eb30405fe 568 Gene3D G3DSA:3.40.50.1220 187 356 2.2E-59 T 11-10-2018 SYN_01711 f378651316798ef54b04a74eb30405fe 568 SUPERFAMILY SSF52467 191 358 1.22E-61 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily SYN_01711 f378651316798ef54b04a74eb30405fe 568 Gene3D G3DSA:3.40.50.970 361 561 2.4E-72 T 11-10-2018 SYN_01711 f378651316798ef54b04a74eb30405fe 568 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 328 3.1E-45 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 SYN_01711 f378651316798ef54b04a74eb30405fe 568 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 3 558 2.1E-248 T 11-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 SYN_01711 f378651316798ef54b04a74eb30405fe 568 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 171 6.7E-60 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SYN_01711 f378651316798ef54b04a74eb30405fe 568 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 426 445 - T 11-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 SYN_01711 f378651316798ef54b04a74eb30405fe 568 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 390 536 9.1E-52 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SYN_00104 a5f85f5954e74f0693e0279bf0280021 527 Pfam PF03023 MviN-like protein 35 474 8.9E-128 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ SYN_00104 a5f85f5954e74f0693e0279bf0280021 527 PRINTS PR01806 Virulence factor MviN signature 416 433 1.2E-67 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ SYN_00104 a5f85f5954e74f0693e0279bf0280021 527 PRINTS PR01806 Virulence factor MviN signature 266 292 1.2E-67 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ SYN_00104 a5f85f5954e74f0693e0279bf0280021 527 PRINTS PR01806 Virulence factor MviN signature 164 185 1.2E-67 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ SYN_00104 a5f85f5954e74f0693e0279bf0280021 527 PRINTS PR01806 Virulence factor MviN signature 40 59 1.2E-67 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ SYN_00104 a5f85f5954e74f0693e0279bf0280021 527 PRINTS PR01806 Virulence factor MviN signature 59 75 1.2E-67 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ SYN_00104 a5f85f5954e74f0693e0279bf0280021 527 PRINTS PR01806 Virulence factor MviN signature 140 164 1.2E-67 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ SYN_00104 a5f85f5954e74f0693e0279bf0280021 527 PRINTS PR01806 Virulence factor MviN signature 364 383 1.2E-67 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ SYN_00104 a5f85f5954e74f0693e0279bf0280021 527 PIRSF PIRSF002869 5 520 1.5E-172 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ SYN_00104 a5f85f5954e74f0693e0279bf0280021 527 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 10 514 3.4E-141 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ SYN_00104 a5f85f5954e74f0693e0279bf0280021 527 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 10 473 20.854 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ SYN_00298 a09b59c8e729537d063891402f5eb5b5 710 PIRSF PIRSF000460 1 710 6.0E-244 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 SYN_00298 a09b59c8e729537d063891402f5eb5b5 710 Pfam PF00343 Carbohydrate phosphorylase 269 623 5.4E-24 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 SYN_00298 a09b59c8e729537d063891402f5eb5b5 710 SUPERFAMILY SSF53756 13 707 1.4E-197 T 11-10-2018 SYN_00298 a09b59c8e729537d063891402f5eb5b5 710 Gene3D G3DSA:3.40.50.2000 417 702 3.1E-41 T 11-10-2018 SYN_00298 a09b59c8e729537d063891402f5eb5b5 710 Gene3D G3DSA:3.40.50.2000 262 416 2.0E-14 T 11-10-2018 SYN_00298 a09b59c8e729537d063891402f5eb5b5 710 TIGRFAM TIGR02094 more_P_ylases: alpha-glucan phosphorylases 108 705 8.0E-245 T 11-10-2018 IPR011834 Alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 SYN_00298 a09b59c8e729537d063891402f5eb5b5 710 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 597 609 - T 11-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 SYN_00298 a09b59c8e729537d063891402f5eb5b5 710 Gene3D G3DSA:3.40.50.2000 113 189 5.8E-9 T 11-10-2018 SYN_00298 a09b59c8e729537d063891402f5eb5b5 710 Pfam PF11897 Protein of unknown function (DUF3417) 12 121 4.9E-30 T 11-10-2018 IPR024517 Glycogen phosphorylase, domain of unknown function DUF3417 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 SYN_00995 919fe7c86953c0b1ec9a2e76b332f196 367 SUPERFAMILY SSF110997 286 363 1.18E-11 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 SYN_00995 919fe7c86953c0b1ec9a2e76b332f196 367 Pfam PF05036 Sporulation related domain 287 363 2.2E-11 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 SYN_00995 919fe7c86953c0b1ec9a2e76b332f196 367 Gene3D G3DSA:3.30.70.1070 282 363 6.4E-8 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 SYN_01258 4924d96e62f1c32620e24a5355f9cfa5 303 SUPERFAMILY SSF142754 3 300 7.59E-117 T 11-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 SYN_01258 4924d96e62f1c32620e24a5355f9cfa5 303 Hamap MF_00568 Quinolinate synthase A [nadA]. 2 301 43.99 T 11-10-2018 IPR023066 Quinolinate synthase A, type 2 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 SYN_01258 4924d96e62f1c32620e24a5355f9cfa5 303 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 2 300 4.8E-108 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 SYN_01258 4924d96e62f1c32620e24a5355f9cfa5 303 Gene3D G3DSA:3.40.50.10800 171 257 7.7E-118 T 11-10-2018 SYN_01258 4924d96e62f1c32620e24a5355f9cfa5 303 Pfam PF02445 Quinolinate synthetase A protein 6 300 6.2E-121 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 SYN_01258 4924d96e62f1c32620e24a5355f9cfa5 303 Gene3D G3DSA:3.40.50.10800 6 282 7.7E-118 T 11-10-2018 SYN_01258 4924d96e62f1c32620e24a5355f9cfa5 303 Gene3D G3DSA:3.40.50.10800 86 299 7.7E-118 T 11-10-2018 SYN_00881 da228a1001178f7cd08fce95f0ba84e2 432 Pfam PF08323 Starch synthase catalytic domain 2 220 2.6E-25 T 11-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 SYN_00881 da228a1001178f7cd08fce95f0ba84e2 432 Gene3D G3DSA:3.40.50.2000 247 427 1.1E-37 T 11-10-2018 SYN_00881 da228a1001178f7cd08fce95f0ba84e2 432 Gene3D G3DSA:3.40.50.2000 1 246 1.2E-40 T 11-10-2018 SYN_00881 da228a1001178f7cd08fce95f0ba84e2 432 SUPERFAMILY SSF53756 3 427 4.54E-81 T 11-10-2018 SYN_00881 da228a1001178f7cd08fce95f0ba84e2 432 Pfam PF00534 Glycosyl transferases group 1 250 392 7.2E-29 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 SYN_01556 96fe7b596ca95e6902c41b2a940f0271 186 Pfam PF04612 Type II secretion system (T2SS), protein M 5 177 2.3E-10 T 11-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 SYN_00563 0c9d2d76a236f8f7e80b3e1fcce23593 101 Pfam PF09853 Putative transposon-encoded protein (DUF2080) 70 96 4.2E-5 T 11-10-2018 IPR019205 Protein of unknown function DUF2080, transposon-encoded SYN_02276 3b66e78d725b335de191d1cea9e4b626 216 Pfam PF14824 Sirohaem biosynthesis protein central 119 144 1.7E-10 T 11-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 SYN_02276 3b66e78d725b335de191d1cea9e4b626 216 SUPERFAMILY SSF75615 114 207 4.32E-22 T 11-10-2018 SYN_02276 3b66e78d725b335de191d1cea9e4b626 216 Pfam PF10414 Sirohaem synthase dimerisation region 151 204 1.6E-4 T 11-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 SYN_02276 3b66e78d725b335de191d1cea9e4b626 216 Gene3D G3DSA:1.10.8.610 131 195 4.1E-5 T 11-10-2018 SYN_02276 3b66e78d725b335de191d1cea9e4b626 216 Gene3D G3DSA:3.40.50.720 3 130 4.2E-43 T 11-10-2018 SYN_02276 3b66e78d725b335de191d1cea9e4b626 216 Pfam PF13241 Putative NAD(P)-binding 6 115 9.0E-32 T 11-10-2018 SYN_02276 3b66e78d725b335de191d1cea9e4b626 216 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 200 4.7E-54 T 11-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 SYN_02276 3b66e78d725b335de191d1cea9e4b626 216 SUPERFAMILY SSF51735 1 112 4.24E-26 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_01761 7f3d15af64afc298c2b37a43c4cdbbf6 169 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 22 42 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site SYN_01761 7f3d15af64afc298c2b37a43c4cdbbf6 169 Pfam PF07963 Prokaryotic N-terminal methylation motif 19 43 4.2E-10 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site SYN_01761 7f3d15af64afc298c2b37a43c4cdbbf6 169 Pfam PF12019 Type II transport protein GspH 59 160 2.9E-9 T 11-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 SYN_01761 7f3d15af64afc298c2b37a43c4cdbbf6 169 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 22 44 4.1E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site SYN_01761 7f3d15af64afc298c2b37a43c4cdbbf6 169 SUPERFAMILY SSF54523 24 146 5.02E-21 T 11-10-2018 SYN_01761 7f3d15af64afc298c2b37a43c4cdbbf6 169 Gene3D G3DSA:3.30.700.10 24 165 1.3E-20 T 11-10-2018 SYN_01761 7f3d15af64afc298c2b37a43c4cdbbf6 169 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 20 164 4.4E-15 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 SYN_02634 31e0d10402b59823e36ae3ecae710304 486 Pfam PF12544 Lysine-2,3-aminomutase 373 485 1.8E-41 T 11-10-2018 IPR025895 Lysine-2,3-aminomutase, C-terminal domain SYN_02634 31e0d10402b59823e36ae3ecae710304 486 TIGRFAM TIGR00238 TIGR00238: KamA family protein 64 392 1.6E-103 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase SYN_02634 31e0d10402b59823e36ae3ecae710304 486 SUPERFAMILY SSF102114 166 410 1.7E-34 T 11-10-2018 SYN_02634 31e0d10402b59823e36ae3ecae710304 486 TIGRFAM TIGR03820 lys_2_3_AblA: lysine-2,3-aminomutase 71 485 1.8E-240 T 11-10-2018 IPR022459 Lysine-2,3-aminomutase KEGG: 00310+5.4.3.2 SYN_02634 31e0d10402b59823e36ae3ecae710304 486 PIRSF PIRSF004911 45 452 3.4E-152 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase SYN_02634 31e0d10402b59823e36ae3ecae710304 486 Gene3D G3DSA:2.40.50.600 401 470 9.8E-23 T 11-10-2018 SYN_02634 31e0d10402b59823e36ae3ecae710304 486 Gene3D G3DSA:3.20.20.70 114 400 5.3E-117 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_02634 31e0d10402b59823e36ae3ecae710304 486 Pfam PF04055 Radical SAM superfamily 182 329 2.4E-13 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_00897 ef87c42e37b8ec54094affdf17b04893 486 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 472 1.3E-157 T 11-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 SYN_00897 ef87c42e37b8ec54094affdf17b04893 486 Pfam PF00571 CBS domain 149 200 1.3E-6 T 11-10-2018 IPR000644 CBS domain SYN_00897 ef87c42e37b8ec54094affdf17b04893 486 Pfam PF00571 CBS domain 96 140 7.7E-11 T 11-10-2018 IPR000644 CBS domain SYN_00897 ef87c42e37b8ec54094affdf17b04893 486 SMART SM00116 97 144 4.1E-10 T 11-10-2018 IPR000644 CBS domain SYN_00897 ef87c42e37b8ec54094affdf17b04893 486 SMART SM00116 157 205 1.8E-7 T 11-10-2018 IPR000644 CBS domain SYN_00897 ef87c42e37b8ec54094affdf17b04893 486 SUPERFAMILY SSF54631 66 202 3.41E-31 T 11-10-2018 SYN_00897 ef87c42e37b8ec54094affdf17b04893 486 SMART SM01240 8 472 0.0 T 11-10-2018 SYN_00897 ef87c42e37b8ec54094affdf17b04893 486 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 9 485 84.181 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 SYN_00897 ef87c42e37b8ec54094affdf17b04893 486 PIRSF PIRSF000130 1 486 1.7E-205 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 SYN_00897 ef87c42e37b8ec54094affdf17b04893 486 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 293 305 - T 11-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 SYN_00897 ef87c42e37b8ec54094affdf17b04893 486 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 9 454 1.7E-190 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 SYN_00897 ef87c42e37b8ec54094affdf17b04893 486 Gene3D G3DSA:3.20.20.70 2 485 2.7E-213 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_00897 ef87c42e37b8ec54094affdf17b04893 486 SUPERFAMILY SSF51412 6 476 2.09E-121 T 11-10-2018 SYN_01012 23b944ccc1e38109499a3c536ec1eb05 119 Pfam PF00825 Ribonuclease P 6 111 1.4E-32 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SYN_01012 23b944ccc1e38109499a3c536ec1eb05 119 SUPERFAMILY SSF54211 5 111 6.57E-30 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SYN_01012 23b944ccc1e38109499a3c536ec1eb05 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 18.306 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SYN_01012 23b944ccc1e38109499a3c536ec1eb05 119 Gene3D G3DSA:3.30.230.10 4 117 4.3E-34 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SYN_01012 23b944ccc1e38109499a3c536ec1eb05 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 55 69 - T 11-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 SYN_01012 23b944ccc1e38109499a3c536ec1eb05 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 111 2.4E-25 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SYN_01012 23b944ccc1e38109499a3c536ec1eb05 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 12 105 3.0E-15 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SYN_01294 8aa085a1cb96d5a8956d287d2df5181c 189 SUPERFAMILY SSF52499 5 188 1.83E-45 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 SYN_01294 8aa085a1cb96d5a8956d287d2df5181c 189 PRINTS PR01398 Isochorismatase signature 86 108 5.7E-6 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 SYN_01294 8aa085a1cb96d5a8956d287d2df5181c 189 PRINTS PR01398 Isochorismatase signature 142 160 5.7E-6 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 SYN_01294 8aa085a1cb96d5a8956d287d2df5181c 189 PRINTS PR01398 Isochorismatase signature 40 57 5.7E-6 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 SYN_01294 8aa085a1cb96d5a8956d287d2df5181c 189 Gene3D G3DSA:3.40.50.850 2 189 8.8E-46 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 SYN_01294 8aa085a1cb96d5a8956d287d2df5181c 189 Pfam PF00857 Isochorismatase family 7 168 1.9E-38 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 SYN_00845 fa2cab68d6366d7c7ec9cd4eadb021fd 420 Gene3D G3DSA:2.130.10.130 38 173 2.2E-5 T 11-10-2018 IPR028994 Integrin alpha, N-terminal Reactome: R-HSA-216083 SYN_00845 fa2cab68d6366d7c7ec9cd4eadb021fd 420 Gene3D G3DSA:2.130.10.130 174 281 5.3E-10 T 11-10-2018 IPR028994 Integrin alpha, N-terminal Reactome: R-HSA-216083 SYN_00845 fa2cab68d6366d7c7ec9cd4eadb021fd 420 SMART SM00191 213 260 0.082 T 11-10-2018 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 SYN_00845 fa2cab68d6366d7c7ec9cd4eadb021fd 420 SMART SM00191 158 207 12.0 T 11-10-2018 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 SYN_00845 fa2cab68d6366d7c7ec9cd4eadb021fd 420 SMART SM00191 102 152 55.0 T 11-10-2018 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 SYN_00845 fa2cab68d6366d7c7ec9cd4eadb021fd 420 SMART SM00191 322 372 100.0 T 11-10-2018 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 SYN_00845 fa2cab68d6366d7c7ec9cd4eadb021fd 420 SMART SM00191 266 316 0.059 T 11-10-2018 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 SYN_00845 fa2cab68d6366d7c7ec9cd4eadb021fd 420 SMART SM00191 46 96 20.0 T 11-10-2018 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 SYN_00845 fa2cab68d6366d7c7ec9cd4eadb021fd 420 Pfam PF14312 FG-GAP repeat 365 415 3.9E-13 T 11-10-2018 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 SYN_00845 fa2cab68d6366d7c7ec9cd4eadb021fd 420 Pfam PF14312 FG-GAP repeat 145 193 1.0E-8 T 11-10-2018 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 SYN_00845 fa2cab68d6366d7c7ec9cd4eadb021fd 420 Pfam PF14312 FG-GAP repeat 35 82 4.4E-12 T 11-10-2018 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 SYN_00845 fa2cab68d6366d7c7ec9cd4eadb021fd 420 Pfam PF14312 FG-GAP repeat 200 246 8.1E-16 T 11-10-2018 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 SYN_00845 fa2cab68d6366d7c7ec9cd4eadb021fd 420 Pfam PF14312 FG-GAP repeat 253 302 3.5E-16 T 11-10-2018 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 SYN_00845 fa2cab68d6366d7c7ec9cd4eadb021fd 420 Pfam PF14312 FG-GAP repeat 92 138 6.8E-12 T 11-10-2018 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 SYN_00845 fa2cab68d6366d7c7ec9cd4eadb021fd 420 Pfam PF14312 FG-GAP repeat 313 358 8.0E-15 T 11-10-2018 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 SYN_00845 fa2cab68d6366d7c7ec9cd4eadb021fd 420 SUPERFAMILY SSF69318 51 285 6.02E-14 T 11-10-2018 SYN_00845 fa2cab68d6366d7c7ec9cd4eadb021fd 420 Gene3D G3DSA:2.130.10.130 282 400 8.1E-6 T 11-10-2018 IPR028994 Integrin alpha, N-terminal Reactome: R-HSA-216083 SYN_00845 fa2cab68d6366d7c7ec9cd4eadb021fd 420 SUPERFAMILY SSF69318 266 401 3.66E-7 T 11-10-2018 SYN_00153 dd73e23a0dfdf4f4c490e10788386039 173 Gene3D G3DSA:1.10.10.1590 15 83 2.3E-15 T 11-10-2018 SYN_00153 dd73e23a0dfdf4f4c490e10788386039 173 PIRSF PIRSF000216 2 173 1.9E-51 T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00153 dd73e23a0dfdf4f4c490e10788386039 173 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 124 142 - T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00153 dd73e23a0dfdf4f4c490e10788386039 173 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 23 166 1.6E-49 T 11-10-2018 SYN_00153 dd73e23a0dfdf4f4c490e10788386039 173 SUPERFAMILY SSF52833 21 168 5.93E-48 T 11-10-2018 IPR036249 Thioredoxin-like superfamily SYN_00153 dd73e23a0dfdf4f4c490e10788386039 173 Gene3D G3DSA:3.40.30.10 84 166 1.7E-28 T 11-10-2018 SYN_02298 cd4b1c815605bebe77defffb1c591937 292 Pfam PF10124 Mu-like prophage major head subunit gpT 8 291 9.9E-129 T 11-10-2018 IPR018774 Bacteriophage Mu, GpT SYN_01141 10d778597ab1494e152c37f048cddcd5 387 Gene3D G3DSA:3.40.50.2000 200 349 7.6E-30 T 11-10-2018 SYN_01141 10d778597ab1494e152c37f048cddcd5 387 Pfam PF13692 Glycosyl transferases group 1 204 327 2.0E-18 T 11-10-2018 SYN_01141 10d778597ab1494e152c37f048cddcd5 387 Gene3D G3DSA:3.40.50.2000 17 199 4.7E-12 T 11-10-2018 SYN_01141 10d778597ab1494e152c37f048cddcd5 387 SUPERFAMILY SSF53756 24 371 2.08E-48 T 11-10-2018 SYN_02775 1d81b6f9cdb9f372949ce7a5238055e5 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 20 194 6.0E-33 T 11-10-2018 SYN_02775 1d81b6f9cdb9f372949ce7a5238055e5 226 SUPERFAMILY SSF56784 12 224 7.48E-53 T 11-10-2018 IPR036412 HAD-like superfamily SYN_02775 1d81b6f9cdb9f372949ce7a5238055e5 226 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 99 190 9.6E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 SYN_02775 1d81b6f9cdb9f372949ce7a5238055e5 226 Gene3D G3DSA:1.10.150.240 30 97 9.6E-53 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 SYN_02775 1d81b6f9cdb9f372949ce7a5238055e5 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 85 194 1.3E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 SYN_02775 1d81b6f9cdb9f372949ce7a5238055e5 226 Gene3D G3DSA:3.40.50.1000 19 216 9.6E-53 T 11-10-2018 IPR023214 HAD superfamily SYN_01041 47194405b57ade873e7608850e7e5dae 486 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 121 330 7.6E-67 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SYN_01041 47194405b57ade873e7608850e7e5dae 486 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 294 301 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SYN_01041 47194405b57ade873e7608850e7e5dae 486 SUPERFAMILY SSF56059 89 356 7.6E-62 T 11-10-2018 SYN_01041 47194405b57ade873e7608850e7e5dae 486 Pfam PF00289 Biotin carboxylase, N-terminal domain 7 115 5.0E-40 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SYN_01041 47194405b57ade873e7608850e7e5dae 486 SUPERFAMILY SSF52440 5 118 1.01E-42 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily SYN_01041 47194405b57ade873e7608850e7e5dae 486 Gene3D G3DSA:3.30.470.130 1 459 6.6E-172 T 11-10-2018 SYN_01041 47194405b57ade873e7608850e7e5dae 486 SMART SM00878 344 451 7.8E-48 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SYN_01041 47194405b57ade873e7608850e7e5dae 486 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 161 175 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SYN_01041 47194405b57ade873e7608850e7e5dae 486 SUPERFAMILY SSF51246 340 458 1.78E-33 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 SYN_01041 47194405b57ade873e7608850e7e5dae 486 Pfam PF02785 Biotin carboxylase C-terminal domain 344 451 1.3E-32 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SYN_02988 4289fd421677ae3f614893c63cbff022 325 Pfam PF13280 WYL domain 140 315 3.6E-39 T 11-10-2018 IPR026881 WYL domain SYN_01310 aa99fd1ed50e4de2ceb609274f8dd1f2 283 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 183 2.8E-65 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 SYN_01310 aa99fd1ed50e4de2ceb609274f8dd1f2 283 PIRSF PIRSF000105 1 283 2.3E-92 T 11-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 SYN_01310 aa99fd1ed50e4de2ceb609274f8dd1f2 283 SUPERFAMILY SSF48179 186 283 1.02E-28 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 SYN_01310 aa99fd1ed50e4de2ceb609274f8dd1f2 283 Gene3D G3DSA:1.10.1040.10 190 283 6.5E-31 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SYN_01310 aa99fd1ed50e4de2ceb609274f8dd1f2 283 SUPERFAMILY SSF51735 1 183 2.96E-59 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_01310 aa99fd1ed50e4de2ceb609274f8dd1f2 283 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 187 283 7.6E-31 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 SYN_01310 aa99fd1ed50e4de2ceb609274f8dd1f2 283 Gene3D G3DSA:3.40.50.720 1 189 2.8E-70 T 11-10-2018 SYN_00703 41623eda1e8e96d9cfc9177fbcfac21a 241 SUPERFAMILY SSF116846 118 178 8.89E-6 T 11-10-2018 IPR036181 MIT domain superfamily SYN_00591 839d12b81a4876796cc12debed0e8f6c 204 SUPERFAMILY SSF52833 51 200 1.37E-41 T 11-10-2018 IPR036249 Thioredoxin-like superfamily SYN_00591 839d12b81a4876796cc12debed0e8f6c 204 Pfam PF00578 AhpC/TSA family 53 178 1.7E-32 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 SYN_00591 839d12b81a4876796cc12debed0e8f6c 204 PIRSF PIRSF000239 47 204 1.1E-25 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 SYN_00591 839d12b81a4876796cc12debed0e8f6c 204 Gene3D G3DSA:3.40.30.10 45 201 2.3E-41 T 11-10-2018 SYN_01716 c2055a7594e1449edaaae7ed06cd28db 179 Gene3D G3DSA:1.20.120.1760 3 170 1.2E-13 T 11-10-2018 SYN_01716 c2055a7594e1449edaaae7ed06cd28db 179 PIRSF PIRSF000847 1 179 1.2E-43 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 SYN_01716 c2055a7594e1449edaaae7ed06cd28db 179 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 44 66 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SYN_01716 c2055a7594e1449edaaae7ed06cd28db 179 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 66 4.0E-17 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SYN_03080 447d3bc142ce680a5b0c7b8a5cd49a47 255 SUPERFAMILY SSF52833 85 224 5.61E-12 T 11-10-2018 IPR036249 Thioredoxin-like superfamily SYN_03080 447d3bc142ce680a5b0c7b8a5cd49a47 255 Gene3D G3DSA:3.40.30.10 88 248 4.7E-10 T 11-10-2018 SYN_03080 447d3bc142ce680a5b0c7b8a5cd49a47 255 Pfam PF13462 Thioredoxin 95 225 2.5E-5 T 11-10-2018 IPR012336 Thioredoxin-like fold SYN_00146 0273d42d627eeaf2d5d1eada2a9b290e 548 SUPERFAMILY SSF48695 59 321 3.05E-17 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily SYN_00096 70479bdaf3b65905fe3c24095ba2cc65 151 Pfam PF02915 Rubrerythrin 8 142 1.6E-16 T 11-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 SYN_00096 70479bdaf3b65905fe3c24095ba2cc65 151 SUPERFAMILY SSF47240 7 150 5.71E-29 T 11-10-2018 IPR009078 Ferritin-like superfamily SYN_00096 70479bdaf3b65905fe3c24095ba2cc65 151 Gene3D G3DSA:1.20.1260.10 1 145 5.6E-31 T 11-10-2018 IPR012347 Ferritin-like SYN_01685 c225820a725fa57a9d0b803691d009c7 293 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 9 293 3.6E-144 T 11-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 SYN_01685 c225820a725fa57a9d0b803691d009c7 293 Gene3D G3DSA:3.20.20.70 1 287 2.0E-143 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_01685 c225820a725fa57a9d0b803691d009c7 293 PIRSF PIRSF029271 1 293 4.9E-146 T 11-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 SYN_01685 c225820a725fa57a9d0b803691d009c7 293 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 3 293 50.103 T 11-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 SYN_01685 c225820a725fa57a9d0b803691d009c7 293 ProSitePatterns PS01235 PdxS/SNZ family signature. 204 222 - T 11-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 SYN_01685 c225820a725fa57a9d0b803691d009c7 293 SUPERFAMILY SSF51366 17 260 1.79E-65 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 SYN_01685 c225820a725fa57a9d0b803691d009c7 293 Pfam PF01680 SOR/SNZ family 7 211 5.7E-107 T 11-10-2018 IPR033755 PdxS/SNZ N-terminal domain KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 SYN_00893 16a821ea5286b17e9317bc76dd750ff2 225 SMART SM00028 141 174 0.041 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00893 16a821ea5286b17e9317bc76dd750ff2 225 SMART SM00028 178 211 0.026 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00893 16a821ea5286b17e9317bc76dd750ff2 225 SMART SM00028 101 136 34.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00893 16a821ea5286b17e9317bc76dd750ff2 225 Pfam PF09976 Tetratricopeptide repeat-like domain 36 220 2.4E-14 T 11-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 SYN_00893 16a821ea5286b17e9317bc76dd750ff2 225 Gene3D G3DSA:1.25.40.10 100 218 3.1E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00893 16a821ea5286b17e9317bc76dd750ff2 225 SUPERFAMILY SSF48452 107 208 3.64E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_01197 39358a5525f5ba58d7342b3b135b9a16 519 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 365 510 1.2E-26 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SYN_01197 39358a5525f5ba58d7342b3b135b9a16 519 SUPERFAMILY SSF52518 1 225 4.53E-61 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold SYN_01197 39358a5525f5ba58d7342b3b135b9a16 519 Gene3D G3DSA:3.40.50.970 1 182 1.1E-57 T 11-10-2018 SYN_01197 39358a5525f5ba58d7342b3b135b9a16 519 Gene3D G3DSA:3.40.50.970 350 512 1.5E-17 T 11-10-2018 SYN_01197 39358a5525f5ba58d7342b3b135b9a16 519 TIGRFAM TIGR03336 IOR_alpha: indolepyruvate ferredoxin oxidoreductase, alpha subunit 3 518 2.0E-197 T 11-10-2018 IPR017721 Indolepyruvate ferredoxin oxidoreductase, alpha subunit GO:0043805|GO:0055114 SYN_01197 39358a5525f5ba58d7342b3b135b9a16 519 SUPERFAMILY SSF52518 336 515 5.89E-26 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold SYN_01197 39358a5525f5ba58d7342b3b135b9a16 519 PIRSF PIRSF006439 1 519 8.0E-207 T 11-10-2018 IPR017721 Indolepyruvate ferredoxin oxidoreductase, alpha subunit GO:0043805|GO:0055114 SYN_01197 39358a5525f5ba58d7342b3b135b9a16 519 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 15 204 1.9E-19 T 11-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 SYN_01197 39358a5525f5ba58d7342b3b135b9a16 519 SUPERFAMILY SSF52922 223 283 2.69E-5 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 SYN_00230 6a5e205314e36ef3b67a8fb2b12875d9 402 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 192 395 9.7E-37 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 SYN_00230 6a5e205314e36ef3b67a8fb2b12875d9 402 Gene3D G3DSA:3.60.40.10 131 395 1.5E-61 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 SYN_00230 6a5e205314e36ef3b67a8fb2b12875d9 402 SMART SM00331 165 395 5.5E-32 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 SYN_00230 6a5e205314e36ef3b67a8fb2b12875d9 402 Pfam PF00072 Response regulator receiver domain 5 117 1.7E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00230 6a5e205314e36ef3b67a8fb2b12875d9 402 SMART SM00448 3 116 9.7E-45 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00230 6a5e205314e36ef3b67a8fb2b12875d9 402 Gene3D G3DSA:3.40.50.2300 1 127 1.4E-38 T 11-10-2018 SYN_00230 6a5e205314e36ef3b67a8fb2b12875d9 402 SUPERFAMILY SSF52172 4 141 5.27E-41 T 11-10-2018 IPR011006 CheY-like superfamily SYN_00367 df6ae6ba95156f640fd1668485c1e648 262 SUPERFAMILY SSF52540 6 238 2.59E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00367 df6ae6ba95156f640fd1668485c1e648 262 Pfam PF00005 ABC transporter 29 166 6.0E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_00367 df6ae6ba95156f640fd1668485c1e648 262 SMART SM00382 36 226 3.0E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00367 df6ae6ba95156f640fd1668485c1e648 262 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_00367 df6ae6ba95156f640fd1668485c1e648 262 Gene3D G3DSA:3.40.50.300 5 257 3.4E-66 T 11-10-2018 SYN_03314 de7b73eab7b5ede39dbec267072cfaa6 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.337 T 11-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_03314 de7b73eab7b5ede39dbec267072cfaa6 179 Pfam PF00281 Ribosomal protein L5 24 80 1.9E-25 T 11-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_03314 de7b73eab7b5ede39dbec267072cfaa6 179 PIRSF PIRSF002161 1 179 2.1E-70 T 11-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_03314 de7b73eab7b5ede39dbec267072cfaa6 179 Gene3D G3DSA:3.30.1440.10 1 179 9.4E-82 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_03314 de7b73eab7b5ede39dbec267072cfaa6 179 SUPERFAMILY SSF55282 3 178 1.18E-78 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_03314 de7b73eab7b5ede39dbec267072cfaa6 179 Pfam PF00673 ribosomal L5P family C-terminus 85 177 4.3E-42 T 11-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_03314 de7b73eab7b5ede39dbec267072cfaa6 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 11-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00513 e9a1343daa89e52fc60835645b0357b4 132 Gene3D G3DSA:1.20.120.1770 1 130 5.1E-6 T 11-10-2018 SYN_00513 e9a1343daa89e52fc60835645b0357b4 132 SMART SM00665 6 126 0.0019 T 11-10-2018 IPR006593 Cytochrome b561/ferric reductase transmembrane SYN_00513 e9a1343daa89e52fc60835645b0357b4 132 Pfam PF03188 Eukaryotic cytochrome b561 5 126 2.7E-8 T 11-10-2018 IPR006593 Cytochrome b561/ferric reductase transmembrane SYN_01280 2952a15a1324c04e1616aaf0ff00568c 91 Gene3D G3DSA:3.90.940.10 1 82 1.0E-17 T 11-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 SYN_01280 2952a15a1324c04e1616aaf0ff00568c 91 SMART SM01409 8 60 3.2E-9 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 SYN_01280 2952a15a1324c04e1616aaf0ff00568c 91 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 58 2.0E-13 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_01280 2952a15a1324c04e1616aaf0ff00568c 91 Pfam PF01192 RNA polymerase Rpb6 10 58 4.1E-8 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 SYN_01280 2952a15a1324c04e1616aaf0ff00568c 91 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 15.743 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SYN_01280 2952a15a1324c04e1616aaf0ff00568c 91 SUPERFAMILY SSF63562 1 65 6.98E-17 T 11-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 SYN_02432 bbf8fe6edcc141c858b2226735516c47 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 11-10-2018 IPR019844 Cold-shock conserved site SYN_02432 bbf8fe6edcc141c858b2226735516c47 66 SMART SM00357 3 66 1.2E-31 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 SYN_02432 bbf8fe6edcc141c858b2226735516c47 66 Gene3D G3DSA:2.40.50.140 1 66 8.0E-31 T 11-10-2018 SYN_02432 bbf8fe6edcc141c858b2226735516c47 66 PIRSF PIRSF002599 1 66 1.5E-23 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 SYN_02432 bbf8fe6edcc141c858b2226735516c47 66 SUPERFAMILY SSF50249 1 65 1.87E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_02432 bbf8fe6edcc141c858b2226735516c47 66 PRINTS PR00050 Cold shock protein signature 4 19 4.2E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SYN_02432 bbf8fe6edcc141c858b2226735516c47 66 PRINTS PR00050 Cold shock protein signature 39 57 4.2E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SYN_02432 bbf8fe6edcc141c858b2226735516c47 66 PRINTS PR00050 Cold shock protein signature 24 33 4.2E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SYN_02432 bbf8fe6edcc141c858b2226735516c47 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 2.1E-29 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SYN_01421 3993354f1b4d4100a4151f73e05971ce 417 Gene3D G3DSA:1.10.3860.10 10 408 5.2E-85 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 SYN_01421 3993354f1b4d4100a4151f73e05971ce 417 PRINTS PR00173 Glutamate-aspartate symporter signature 296 322 1.1E-19 T 11-10-2018 SYN_01421 3993354f1b4d4100a4151f73e05971ce 417 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 1.1E-19 T 11-10-2018 SYN_01421 3993354f1b4d4100a4151f73e05971ce 417 PRINTS PR00173 Glutamate-aspartate symporter signature 359 379 1.1E-19 T 11-10-2018 SYN_01421 3993354f1b4d4100a4151f73e05971ce 417 PRINTS PR00173 Glutamate-aspartate symporter signature 17 37 1.1E-19 T 11-10-2018 SYN_01421 3993354f1b4d4100a4151f73e05971ce 417 PRINTS PR00173 Glutamate-aspartate symporter signature 194 213 1.1E-19 T 11-10-2018 SYN_01421 3993354f1b4d4100a4151f73e05971ce 417 SUPERFAMILY SSF118215 19 404 4.84E-84 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 SYN_01421 3993354f1b4d4100a4151f73e05971ce 417 Pfam PF00375 Sodium:dicarboxylate symporter family 20 404 1.1E-97 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 SYN_01250 11eff77ea09c8f79a983ae5b8c426767 253 SUPERFAMILY SSF53927 3 252 3.31E-68 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 SYN_01250 11eff77ea09c8f79a983ae5b8c426767 253 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 1 253 28.47 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 SYN_01250 11eff77ea09c8f79a983ae5b8c426767 253 Gene3D G3DSA:3.10.20.10 24 103 1.5E-13 T 11-10-2018 SYN_01250 11eff77ea09c8f79a983ae5b8c426767 253 Gene3D G3DSA:3.40.140.10 110 253 3.7E-43 T 11-10-2018 SYN_01250 11eff77ea09c8f79a983ae5b8c426767 253 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 19 252 1.9E-47 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 SYN_01250 11eff77ea09c8f79a983ae5b8c426767 253 Pfam PF02634 FdhD/NarQ family 23 252 4.4E-67 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 SYN_01250 11eff77ea09c8f79a983ae5b8c426767 253 PIRSF PIRSF015626 2 253 2.7E-64 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 SYN_02304 854f834dc59af790ffe4f3f026169ddc 479 Gene3D G3DSA:3.30.420.240 253 444 1.2E-19 T 11-10-2018 SYN_02304 854f834dc59af790ffe4f3f026169ddc 479 Pfam PF17289 Terminase RNaseH-like domain 291 442 6.7E-13 T 11-10-2018 IPR035421 Terminase, large subunit gp17-like SYN_02304 854f834dc59af790ffe4f3f026169ddc 479 Gene3D G3DSA:3.40.50.300 15 189 1.8E-24 T 11-10-2018 SYN_02304 854f834dc59af790ffe4f3f026169ddc 479 Pfam PF03237 Terminase-like family 34 257 2.3E-6 T 11-10-2018 IPR004921 Terminase large subunit, T4likevirus-type SYN_00423 8bcc421e0027905c5c424e7e130a720a 338 Pfam PF00814 Glycoprotease family 24 306 1.7E-97 T 11-10-2018 IPR000905 Gcp-like domain SYN_00423 8bcc421e0027905c5c424e7e130a720a 338 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 6.0E-105 T 11-10-2018 IPR017861 Kae1/TsaD family SYN_00423 8bcc421e0027905c5c424e7e130a720a 338 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 62.981 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 SYN_00423 8bcc421e0027905c5c424e7e130a720a 338 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 312 1.5E-128 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 SYN_00423 8bcc421e0027905c5c424e7e130a720a 338 SUPERFAMILY SSF53067 1 306 2.16E-39 T 11-10-2018 SYN_00423 8bcc421e0027905c5c424e7e130a720a 338 Gene3D G3DSA:3.30.420.40 3 313 3.7E-122 T 11-10-2018 SYN_00423 8bcc421e0027905c5c424e7e130a720a 338 Gene3D G3DSA:3.30.420.40 129 293 3.7E-122 T 11-10-2018 SYN_00423 8bcc421e0027905c5c424e7e130a720a 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 2.5E-47 T 11-10-2018 IPR017861 Kae1/TsaD family SYN_00423 8bcc421e0027905c5c424e7e130a720a 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 2.5E-47 T 11-10-2018 IPR017861 Kae1/TsaD family SYN_00423 8bcc421e0027905c5c424e7e130a720a 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 2.5E-47 T 11-10-2018 IPR017861 Kae1/TsaD family SYN_00423 8bcc421e0027905c5c424e7e130a720a 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 2.5E-47 T 11-10-2018 IPR017861 Kae1/TsaD family SYN_00423 8bcc421e0027905c5c424e7e130a720a 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 2.5E-47 T 11-10-2018 IPR017861 Kae1/TsaD family SYN_00423 8bcc421e0027905c5c424e7e130a720a 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 2.5E-47 T 11-10-2018 IPR017861 Kae1/TsaD family SYN_02403 74c7684828d3a9b1c2f7dfa391d63b11 600 Pfam PF07244 Surface antigen variable number repeat 153 192 1.8E-4 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 SYN_02403 74c7684828d3a9b1c2f7dfa391d63b11 600 Gene3D G3DSA:3.10.20.310 214 289 1.8E-11 T 11-10-2018 SYN_02403 74c7684828d3a9b1c2f7dfa391d63b11 600 Gene3D G3DSA:3.10.20.310 42 125 1.8E-8 T 11-10-2018 SYN_02403 74c7684828d3a9b1c2f7dfa391d63b11 600 Gene3D G3DSA:3.10.20.310 126 212 1.5E-16 T 11-10-2018 SYN_02403 74c7684828d3a9b1c2f7dfa391d63b11 600 Pfam PF01103 Surface antigen 315 598 5.6E-32 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 SYN_02403 74c7684828d3a9b1c2f7dfa391d63b11 600 Pfam PF17243 POTRA domain TamA domain 1 45 124 1.9E-14 T 11-10-2018 IPR035243 TamA, POTRA domain 1 SYN_02403 74c7684828d3a9b1c2f7dfa391d63b11 600 Gene3D G3DSA:2.40.160.50 291 600 9.3E-86 T 11-10-2018 SYN_02954 bf5c4658769ccacf7fde9e81b15eb159 341 Gene3D G3DSA:3.20.20.70 1 341 3.5E-107 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_02954 bf5c4658769ccacf7fde9e81b15eb159 341 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 11 337 1.0E-73 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SYN_02954 bf5c4658769ccacf7fde9e81b15eb159 341 PIRSF PIRSF001359 5 338 3.3E-65 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SYN_02954 bf5c4658769ccacf7fde9e81b15eb159 341 SUPERFAMILY SSF51569 5 336 2.69E-89 T 11-10-2018 SYN_02954 bf5c4658769ccacf7fde9e81b15eb159 341 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 7 337 6.5E-118 T 11-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 SYN_02954 bf5c4658769ccacf7fde9e81b15eb159 341 Pfam PF01116 Fructose-bisphosphate aldolase class-II 10 336 9.1E-77 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SYN_00946 7b87155fb9cd8c7c91d070c9bace775e 240 Pfam PF00005 ABC transporter 20 165 6.2E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_00946 7b87155fb9cd8c7c91d070c9bace775e 240 SMART SM00382 28 212 1.5E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00946 7b87155fb9cd8c7c91d070c9bace775e 240 Gene3D G3DSA:3.40.50.300 2 240 2.4E-66 T 11-10-2018 SYN_00946 7b87155fb9cd8c7c91d070c9bace775e 240 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 240 8.7E-110 T 11-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 SYN_00946 7b87155fb9cd8c7c91d070c9bace775e 240 SUPERFAMILY SSF52540 4 231 9.56E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01002 347adbbd4cc2ec3305b2404267ee36f8 532 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 10 93 1.8E-15 T 11-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SYN_01002 347adbbd4cc2ec3305b2404267ee36f8 532 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 397 525 8.4E-40 T 11-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SYN_01002 347adbbd4cc2ec3305b2404267ee36f8 532 Pfam PF01676 Metalloenzyme superfamily 125 295 1.0E-32 T 11-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 SYN_01002 347adbbd4cc2ec3305b2404267ee36f8 532 Gene3D G3DSA:3.40.720.10 103 315 4.6E-57 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 SYN_01002 347adbbd4cc2ec3305b2404267ee36f8 532 SUPERFAMILY SSF64158 393 526 2.22E-37 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SYN_01002 347adbbd4cc2ec3305b2404267ee36f8 532 SUPERFAMILY SSF53649 87 307 7.85E-39 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 SYN_01002 347adbbd4cc2ec3305b2404267ee36f8 532 Gene3D G3DSA:3.40.1450.10 392 531 5.1E-46 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SYN_01002 347adbbd4cc2ec3305b2404267ee36f8 532 Gene3D G3DSA:3.40.1450.10 1 102 4.6E-21 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SYN_01002 347adbbd4cc2ec3305b2404267ee36f8 532 PIRSF PIRSF001492 1 310 2.5E-77 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SYN_01002 347adbbd4cc2ec3305b2404267ee36f8 532 PIRSF PIRSF001492 314 531 1.3E-66 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SYN_01002 347adbbd4cc2ec3305b2404267ee36f8 532 SUPERFAMILY SSF53649 319 439 8.94E-13 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 SYN_01002 347adbbd4cc2ec3305b2404267ee36f8 532 Pfam PF01676 Metalloenzyme superfamily 320 396 5.8E-16 T 11-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 SYN_01002 347adbbd4cc2ec3305b2404267ee36f8 532 SUPERFAMILY SSF64158 5 104 2.48E-17 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SYN_01440 09fa3709265216252208952b9c1c3b6a 286 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 16 275 1.6E-75 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 SYN_01440 09fa3709265216252208952b9c1c3b6a 286 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 17 272 1.1E-74 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 SYN_01440 09fa3709265216252208952b9c1c3b6a 286 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 14 278 19.509 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 SYN_01440 09fa3709265216252208952b9c1c3b6a 286 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 156 168 - T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 SYN_02331 1b1ec43935ac1f91031915e7ce8c7cb5 256 Gene3D G3DSA:1.20.5.170 180 243 1.8E-6 T 11-10-2018 SYN_02331 1b1ec43935ac1f91031915e7ce8c7cb5 256 Gene3D G3DSA:1.10.260.40 14 80 7.9E-6 T 11-10-2018 SYN_02331 1b1ec43935ac1f91031915e7ce8c7cb5 256 SUPERFAMILY SSF47413 24 76 7.19E-5 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 SYN_00059 390d45c11d9b40a008850ec6287c7662 256 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 10 256 1.7E-123 T 11-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 SYN_00059 390d45c11d9b40a008850ec6287c7662 256 Gene3D G3DSA:3.40.50.300 7 254 6.6E-65 T 11-10-2018 SYN_00059 390d45c11d9b40a008850ec6287c7662 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_00059 390d45c11d9b40a008850ec6287c7662 256 Pfam PF00005 ABC transporter 25 181 4.9E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_00059 390d45c11d9b40a008850ec6287c7662 256 SUPERFAMILY SSF52540 8 243 1.42E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00059 390d45c11d9b40a008850ec6287c7662 256 SMART SM00382 34 243 1.6E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00122 9814ff61c3f4d1735b9989a856c91beb 439 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 439 199.338 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 SYN_00122 9814ff61c3f4d1735b9989a856c91beb 439 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 140 151 - T 11-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 SYN_00122 9814ff61c3f4d1735b9989a856c91beb 439 SMART SM00788 10 432 8.1E-272 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 SYN_00122 9814ff61c3f4d1735b9989a856c91beb 439 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 12 437 2.2E-166 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 SYN_00122 9814ff61c3f4d1735b9989a856c91beb 439 SUPERFAMILY SSF52540 8 437 4.46E-169 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00122 9814ff61c3f4d1735b9989a856c91beb 439 Gene3D G3DSA:3.40.440.10 12 266 9.3E-98 T 11-10-2018 SYN_00122 9814ff61c3f4d1735b9989a856c91beb 439 Pfam PF00709 Adenylosuccinate synthetase 11 431 8.0E-174 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 SYN_00122 9814ff61c3f4d1735b9989a856c91beb 439 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 17 24 - T 11-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 SYN_00122 9814ff61c3f4d1735b9989a856c91beb 439 Gene3D G3DSA:3.90.170.10 274 439 2.9E-68 T 11-10-2018 SYN_00122 9814ff61c3f4d1735b9989a856c91beb 439 Gene3D G3DSA:1.10.300.10 109 208 9.3E-98 T 11-10-2018 SYN_00273 f99aa06488a315ccf2b2f3757a4d71bc 459 SUPERFAMILY SSF55469 265 450 9.31E-14 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SYN_00273 f99aa06488a315ccf2b2f3757a4d71bc 459 Pfam PF00881 Nitroreductase family 270 445 3.7E-12 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 SYN_00273 f99aa06488a315ccf2b2f3757a4d71bc 459 Gene3D G3DSA:3.40.109.10 236 459 9.6E-49 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SYN_00273 f99aa06488a315ccf2b2f3757a4d71bc 459 TIGRFAM TIGR03605 antibiot_sagB: SagB-type dehydrogenase domain 284 457 1.9E-56 T 11-10-2018 IPR020051 SagB-type dehydrogenase domain SYN_01343 8f706176a2b61bf23a022791791ad304 562 Gene3D G3DSA:3.30.310.50 457 560 1.4E-35 T 11-10-2018 SYN_01343 8f706176a2b61bf23a022791791ad304 562 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 223 327 1.2E-14 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_01343 8f706176a2b61bf23a022791791ad304 562 Gene3D G3DSA:3.40.120.10 234 331 2.0E-42 T 11-10-2018 SYN_01343 8f706176a2b61bf23a022791791ad304 562 SUPERFAMILY SSF53738 38 248 1.2E-47 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_01343 8f706176a2b61bf23a022791791ad304 562 SUPERFAMILY SSF53738 222 329 4.83E-7 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_01343 8f706176a2b61bf23a022791791ad304 562 Gene3D G3DSA:3.40.120.10 332 456 7.0E-34 T 11-10-2018 SYN_01343 8f706176a2b61bf23a022791791ad304 562 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 334 454 9.7E-28 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_01343 8f706176a2b61bf23a022791791ad304 562 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 13 556 2.1E-268 T 11-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 SYN_01343 8f706176a2b61bf23a022791791ad304 562 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 52 193 7.1E-36 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_01343 8f706176a2b61bf23a022791791ad304 562 Gene3D G3DSA:3.40.120.10 29 233 1.5E-70 T 11-10-2018 SYN_01343 8f706176a2b61bf23a022791791ad304 562 SUPERFAMILY SSF55957 449 556 6.02E-21 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_01343 8f706176a2b61bf23a022791791ad304 562 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 153 162 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_01343 8f706176a2b61bf23a022791791ad304 562 SUPERFAMILY SSF53738 318 459 5.89E-30 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_01343 8f706176a2b61bf23a022791791ad304 562 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 494 551 6.4E-11 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_01054 66888ad0391c2c334633588297490fa3 288 SMART SM00382 31 219 1.6E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01054 66888ad0391c2c334633588297490fa3 288 Gene3D G3DSA:3.40.50.300 1 256 3.6E-67 T 11-10-2018 SYN_01054 66888ad0391c2c334633588297490fa3 288 SUPERFAMILY SSF52540 5 238 4.36E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01054 66888ad0391c2c334633588297490fa3 288 Pfam PF00005 ABC transporter 22 170 1.4E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_02486 6b7f0adaa72404d1ebcbcc03f45ad1fc 940 SUPERFAMILY SSF52540 5 567 2.74E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02486 6b7f0adaa72404d1ebcbcc03f45ad1fc 940 Gene3D G3DSA:1.10.8.280 285 401 2.7E-253 T 11-10-2018 SYN_02486 6b7f0adaa72404d1ebcbcc03f45ad1fc 940 Hamap MF_00205 UvrABC system protein A [uvrA]. 2 936 22.505 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 SYN_02486 6b7f0adaa72404d1ebcbcc03f45ad1fc 940 SUPERFAMILY SSF52540 610 905 5.33E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02486 6b7f0adaa72404d1ebcbcc03f45ad1fc 940 Gene3D G3DSA:3.30.190.20 131 242 2.7E-253 T 11-10-2018 SYN_02486 6b7f0adaa72404d1ebcbcc03f45ad1fc 940 Gene3D G3DSA:3.40.50.300 7 593 2.7E-253 T 11-10-2018 SYN_02486 6b7f0adaa72404d1ebcbcc03f45ad1fc 940 Pfam PF00005 ABC transporter 620 856 5.4E-7 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_02486 6b7f0adaa72404d1ebcbcc03f45ad1fc 940 ProSitePatterns PS00211 ABC transporters family signature. 826 840 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_02486 6b7f0adaa72404d1ebcbcc03f45ad1fc 940 Gene3D G3DSA:1.20.1580.10 91 490 2.7E-253 T 11-10-2018 SYN_02486 6b7f0adaa72404d1ebcbcc03f45ad1fc 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 921 0.0 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 SYN_02486 6b7f0adaa72404d1ebcbcc03f45ad1fc 940 Gene3D G3DSA:3.40.50.300 610 932 8.5E-136 T 11-10-2018 SYN_02486 6b7f0adaa72404d1ebcbcc03f45ad1fc 940 Gene3D G3DSA:1.20.1580.10 689 826 8.5E-136 T 11-10-2018 SYN_02389 7a40aea09eaee9fbc80dc06ed84f95f4 528 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 75 235 5.2E-37 T 11-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like SYN_02502 7869c73ea41f7a0de5a45cd9f74aa324 291 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 11-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site SYN_02502 7869c73ea41f7a0de5a45cd9f74aa324 291 PIRSF PIRSF001553 1 291 3.2E-122 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 SYN_02502 7869c73ea41f7a0de5a45cd9f74aa324 291 Gene3D G3DSA:3.40.50.720 1 123 1.7E-48 T 11-10-2018 SYN_02502 7869c73ea41f7a0de5a45cd9f74aa324 291 Pfam PF00549 CoA-ligase 151 271 4.6E-15 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_02502 7869c73ea41f7a0de5a45cd9f74aa324 291 SMART SM00881 4 100 2.6E-34 T 11-10-2018 IPR003781 CoA-binding GO:0048037 SYN_02502 7869c73ea41f7a0de5a45cd9f74aa324 291 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.0E-31 T 11-10-2018 SYN_02502 7869c73ea41f7a0de5a45cd9f74aa324 291 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.0E-31 T 11-10-2018 SYN_02502 7869c73ea41f7a0de5a45cd9f74aa324 291 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.0E-31 T 11-10-2018 SYN_02502 7869c73ea41f7a0de5a45cd9f74aa324 291 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.0E-31 T 11-10-2018 SYN_02502 7869c73ea41f7a0de5a45cd9f74aa324 291 Pfam PF02629 CoA binding domain 6 99 1.7E-29 T 11-10-2018 IPR003781 CoA-binding GO:0048037 SYN_02502 7869c73ea41f7a0de5a45cd9f74aa324 291 SUPERFAMILY SSF51735 1 122 2.28E-41 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_02502 7869c73ea41f7a0de5a45cd9f74aa324 291 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 41.268 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 SYN_02502 7869c73ea41f7a0de5a45cd9f74aa324 291 Gene3D G3DSA:3.40.50.261 124 289 4.4E-72 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_02502 7869c73ea41f7a0de5a45cd9f74aa324 291 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 11-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site SYN_02502 7869c73ea41f7a0de5a45cd9f74aa324 291 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 287 4.0E-131 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 SYN_02502 7869c73ea41f7a0de5a45cd9f74aa324 291 SUPERFAMILY SSF52210 123 288 1.19E-52 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_02114 db8c66cf4c09c0fd5eb13e80ed9cc3f6 126 Pfam PF08000 Bacterial PH domain 4 123 2.4E-35 T 11-10-2018 IPR012544 Bacterial Pleckstrin homology domain SYN_02114 db8c66cf4c09c0fd5eb13e80ed9cc3f6 126 Gene3D G3DSA:2.30.29.50 2 126 3.4E-34 T 11-10-2018 IPR037063 Bacterial Pleckstrin homology domain superfamily SYN_02114 db8c66cf4c09c0fd5eb13e80ed9cc3f6 126 SUPERFAMILY SSF50729 18 125 4.0E-31 T 11-10-2018 SYN_03784 33fe65ced28a8ab87e8329167edbfb25 238 Pfam PF04015 Domain of unknown function (DUF362) 38 212 1.6E-36 T 11-10-2018 IPR007160 Domain of unknown function DUF362 SYN_01718 433437c4001bac062f6cb2720bedf529 181 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 13 181 27.23 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 SYN_01718 433437c4001bac062f6cb2720bedf529 181 SUPERFAMILY SSF54364 17 90 7.32E-25 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 SYN_01718 433437c4001bac062f6cb2720bedf529 181 ProSitePatterns PS00938 Initiation factor 3 signature. 70 83 - T 11-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 SYN_01718 433437c4001bac062f6cb2720bedf529 181 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 19 85 5.0E-28 T 11-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 SYN_01718 433437c4001bac062f6cb2720bedf529 181 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 95 180 8.0E-37 T 11-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 SYN_01718 433437c4001bac062f6cb2720bedf529 181 Gene3D G3DSA:3.10.20.80 13 90 6.6E-30 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 SYN_01718 433437c4001bac062f6cb2720bedf529 181 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 19 181 4.8E-62 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 SYN_01718 433437c4001bac062f6cb2720bedf529 181 Gene3D G3DSA:3.30.110.10 91 181 1.6E-36 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 SYN_01718 433437c4001bac062f6cb2720bedf529 181 SUPERFAMILY SSF55200 95 181 7.19E-31 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 SYN_01376 7a7c60d425f9a7aaab29cbea20cbce80 185 Gene3D G3DSA:3.30.70.20 75 169 2.0E-6 T 11-10-2018 SYN_01376 7a7c60d425f9a7aaab29cbea20cbce80 185 SUPERFAMILY SSF54862 10 144 1.09E-20 T 11-10-2018 SYN_01376 7a7c60d425f9a7aaab29cbea20cbce80 185 Gene3D G3DSA:3.30.70.20 9 68 2.9E-5 T 11-10-2018 SYN_00613 6238ab4ad2e7b94578865b14b97c435e 198 Pfam PF07027 Protein of unknown function (DUF1318) 103 198 1.9E-20 T 11-10-2018 IPR008309 Uncharacterised conserved protein UCP025560 SYN_00164 b923928beea6039474993e68432ffa7f 187 SUPERFAMILY SSF53927 22 175 2.85E-57 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 SYN_00164 b923928beea6039474993e68432ffa7f 187 Gene3D G3DSA:3.40.140.10 17 185 1.1E-61 T 11-10-2018 SYN_00164 b923928beea6039474993e68432ffa7f 187 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 77 114 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 SYN_00164 b923928beea6039474993e68432ffa7f 187 Pfam PF14437 MafB19-like deaminase 27 172 1.0E-38 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 SYN_00164 b923928beea6039474993e68432ffa7f 187 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 32 173 47.097 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 SYN_00019 57d767500679bfd3fd6d632ccc65d636 176 SMART SM00357 113 176 0.0075 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 SYN_00019 57d767500679bfd3fd6d632ccc65d636 176 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 5 98 4.3E-12 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 SYN_00019 57d767500679bfd3fd6d632ccc65d636 176 Gene3D G3DSA:3.30.160.100 4 109 6.4E-14 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like SYN_00019 57d767500679bfd3fd6d632ccc65d636 176 Pfam PF00313 'Cold-shock' DNA-binding domain 121 174 5.8E-10 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SYN_00019 57d767500679bfd3fd6d632ccc65d636 176 SUPERFAMILY SSF50249 113 175 7.07E-13 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_00019 57d767500679bfd3fd6d632ccc65d636 176 Gene3D G3DSA:2.40.50.140 113 176 8.7E-12 T 11-10-2018 SYN_00019 57d767500679bfd3fd6d632ccc65d636 176 SUPERFAMILY SSF69754 5 110 1.7E-16 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like SYN_02177 67cff9f6ed556d424b09d959064e1743 423 Pfam PF02441 Flavoprotein 5 176 2.5E-46 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 SYN_02177 67cff9f6ed556d424b09d959064e1743 423 Gene3D G3DSA:3.40.50.10300 185 399 5.1E-80 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 SYN_02177 67cff9f6ed556d424b09d959064e1743 423 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 2 391 1.6E-139 T 11-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 SYN_02177 67cff9f6ed556d424b09d959064e1743 423 Gene3D G3DSA:3.40.50.1950 1 184 2.0E-55 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 SYN_02177 67cff9f6ed556d424b09d959064e1743 423 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 185 365 1.2E-70 T 11-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 SYN_02177 67cff9f6ed556d424b09d959064e1743 423 SUPERFAMILY SSF102645 182 396 3.27E-75 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 SYN_02177 67cff9f6ed556d424b09d959064e1743 423 SUPERFAMILY SSF52507 1 177 7.85E-59 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 SYN_02867 7521c35825e2f7ffc248ad86f2f0ffc5 306 Pfam PF01458 Uncharacterized protein family (UPF0051) 79 304 5.8E-45 T 11-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 SYN_02867 7521c35825e2f7ffc248ad86f2f0ffc5 306 SUPERFAMILY SSF101960 25 305 9.29E-42 T 11-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily SYN_02615 1c28ee5496621799bf0a55022ab507cb 153 SUPERFAMILY SSF48695 8 143 7.34E-20 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily SYN_02615 1c28ee5496621799bf0a55022ab507cb 153 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 5 119 1.8E-12 T 11-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal SYN_02615 1c28ee5496621799bf0a55022ab507cb 153 Gene3D G3DSA:1.10.3820.10 2 150 2.2E-37 T 11-10-2018 IPR038266 NapC/NirT cytochrome c superfamily SYN_01760 f3f6ee323b3482174fc95164176258e6 149 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 26 46 5.4E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site SYN_01760 f3f6ee323b3482174fc95164176258e6 149 Pfam PF07963 Prokaryotic N-terminal methylation motif 26 48 1.2E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site SYN_00047 b20743807526e649d32fd07c21d3f404 240 Pfam PF01048 Phosphorylase superfamily 40 232 1.9E-35 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SYN_00047 b20743807526e649d32fd07c21d3f404 240 Gene3D G3DSA:3.40.50.1580 2 240 6.3E-56 T 11-10-2018 SYN_00047 b20743807526e649d32fd07c21d3f404 240 SUPERFAMILY SSF53167 4 235 2.49E-50 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 SYN_02931 78d5980e4c6b5401d98319bf108ae4f0 175 PIRSF PIRSF006443 2 169 1.6E-41 T 11-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 SYN_02931 78d5980e4c6b5401d98319bf108ae4f0 175 SUPERFAMILY SSF53218 14 166 1.14E-47 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily SYN_02931 78d5980e4c6b5401d98319bf108ae4f0 175 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 15 155 1.3E-38 T 11-10-2018 IPR001453 MoaB/Mog domain SYN_02931 78d5980e4c6b5401d98319bf108ae4f0 175 SMART SM00852 17 161 7.1E-32 T 11-10-2018 IPR001453 MoaB/Mog domain SYN_02931 78d5980e4c6b5401d98319bf108ae4f0 175 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 77 90 - T 11-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 SYN_02931 78d5980e4c6b5401d98319bf108ae4f0 175 Pfam PF00994 Probable molybdopterin binding domain 17 160 1.5E-37 T 11-10-2018 IPR001453 MoaB/Mog domain SYN_02931 78d5980e4c6b5401d98319bf108ae4f0 175 Gene3D G3DSA:3.40.980.10 11 174 1.9E-62 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily SYN_02596 939c7f1cbd3a2b1d770b8844ec7f89ad 98 Pfam PF02371 Transposase IS116/IS110/IS902 family 63 95 2.6E-5 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 SYN_00224 57de596c5af5dc90dcf3f62e36f7ffde 567 Pfam PF01471 Putative peptidoglycan binding domain 271 302 4.1E-9 T 11-10-2018 IPR002477 Peptidoglycan binding-like SYN_00224 57de596c5af5dc90dcf3f62e36f7ffde 567 SUPERFAMILY SSF141523 327 490 2.62E-20 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like SYN_00224 57de596c5af5dc90dcf3f62e36f7ffde 567 Pfam PF03734 L,D-transpeptidase catalytic domain 330 497 2.4E-27 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 SYN_00224 57de596c5af5dc90dcf3f62e36f7ffde 567 SUPERFAMILY SSF47090 225 311 6.75E-14 T 11-10-2018 IPR036365 PGBD-like superfamily SYN_00224 57de596c5af5dc90dcf3f62e36f7ffde 567 Gene3D G3DSA:2.40.440.10 280 405 3.8E-18 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like SYN_00224 57de596c5af5dc90dcf3f62e36f7ffde 567 Gene3D G3DSA:2.40.440.10 407 511 8.7E-16 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like SYN_00315 768f70196cab9bc8d5d94c83b72c0b40 184 Pfam PF01966 HD domain 20 99 4.6E-7 T 11-10-2018 IPR006674 HD domain SYN_00315 768f70196cab9bc8d5d94c83b72c0b40 184 SUPERFAMILY SSF109604 12 120 6.28E-16 T 11-10-2018 SYN_00315 768f70196cab9bc8d5d94c83b72c0b40 184 Gene3D G3DSA:1.10.3210.10 1 154 4.2E-11 T 11-10-2018 SYN_00315 768f70196cab9bc8d5d94c83b72c0b40 184 TIGRFAM TIGR00277 HDIG: HDIG domain 17 91 1.6E-10 T 11-10-2018 IPR006675 HDIG domain SYN_01052 5b6dca1a6b6f6ea1d31e1d3ddac33828 126 Pfam PF02472 Biopolymer transport protein ExbD/TolR 7 123 7.2E-24 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 SYN_01052 5b6dca1a6b6f6ea1d31e1d3ddac33828 126 Gene3D G3DSA:3.30.420.270 55 120 2.9E-8 T 11-10-2018 SYN_01472 fce399ab43a18a92d6d05397d57a7434 239 Pfam PF02108 Flagellar assembly protein FliH 101 229 3.5E-23 T 11-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE SYN_02802 d75c2c0c39f59c99cb0cb8e68768efba 1086 SUPERFAMILY SSF48452 16 153 5.69E-24 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_02802 d75c2c0c39f59c99cb0cb8e68768efba 1086 SUPERFAMILY SSF53756 275 511 2.41E-8 T 11-10-2018 SYN_02802 d75c2c0c39f59c99cb0cb8e68768efba 1086 Gene3D G3DSA:3.40.50.150 514 680 2.5E-21 T 11-10-2018 SYN_02802 d75c2c0c39f59c99cb0cb8e68768efba 1086 SMART SM00028 117 150 230.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_02802 d75c2c0c39f59c99cb0cb8e68768efba 1086 SMART SM00028 49 82 2.2E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_02802 d75c2c0c39f59c99cb0cb8e68768efba 1086 SMART SM00028 15 48 17.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_02802 d75c2c0c39f59c99cb0cb8e68768efba 1086 SMART SM00028 83 116 210.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_02802 d75c2c0c39f59c99cb0cb8e68768efba 1086 SUPERFAMILY SSF53335 558 698 7.81E-21 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_02802 d75c2c0c39f59c99cb0cb8e68768efba 1086 Pfam PF13524 Glycosyl transferases group 1 417 507 3.1E-9 T 11-10-2018 SYN_02802 d75c2c0c39f59c99cb0cb8e68768efba 1086 SUPERFAMILY SSF53335 949 1076 3.38E-15 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_02802 d75c2c0c39f59c99cb0cb8e68768efba 1086 Gene3D G3DSA:3.40.50.2000 343 513 3.7E-7 T 11-10-2018 SYN_02802 d75c2c0c39f59c99cb0cb8e68768efba 1086 Gene3D G3DSA:1.25.40.10 2 207 7.8E-27 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_02802 d75c2c0c39f59c99cb0cb8e68768efba 1086 SUPERFAMILY SSF53335 752 876 1.12E-11 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_02802 d75c2c0c39f59c99cb0cb8e68768efba 1086 Pfam PF13424 Tetratricopeptide repeat 51 108 3.7E-7 T 11-10-2018 SYN_02802 d75c2c0c39f59c99cb0cb8e68768efba 1086 Gene3D G3DSA:3.40.50.150 732 905 1.6E-11 T 11-10-2018 SYN_02802 d75c2c0c39f59c99cb0cb8e68768efba 1086 Gene3D G3DSA:3.40.50.150 926 1077 1.6E-15 T 11-10-2018 SYN_02802 d75c2c0c39f59c99cb0cb8e68768efba 1086 Pfam PF08241 Methyltransferase domain 952 1002 5.3E-7 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 SYN_02802 d75c2c0c39f59c99cb0cb8e68768efba 1086 Pfam PF08241 Methyltransferase domain 560 647 2.4E-13 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 SYN_03060 4f4565ff72f4e38975ac47efa31cb0cc 237 Gene3D G3DSA:2.40.70.10 111 236 9.6E-20 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily SYN_03060 4f4565ff72f4e38975ac47efa31cb0cc 237 Pfam PF13650 Aspartyl protease 132 219 3.2E-13 T 11-10-2018 SYN_03060 4f4565ff72f4e38975ac47efa31cb0cc 237 SUPERFAMILY SSF50630 132 229 9.96E-10 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily SYN_01682 7e855613eab4ad7a4074c33b323faf85 145 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 31 64 1.3E-9 T 11-10-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal SYN_01682 7e855613eab4ad7a4074c33b323faf85 145 Gene3D G3DSA:1.10.12.20 11 68 1.1E-9 T 11-10-2018 SYN_01682 7e855613eab4ad7a4074c33b323faf85 145 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 65 129 2.5E-10 T 11-10-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal SYN_01682 7e855613eab4ad7a4074c33b323faf85 145 SUPERFAMILY SSF50249 25 137 2.91E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_02819 1f2b2bc35edebf144091584adb520874 260 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 258 5.8E-101 T 11-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 SYN_02819 1f2b2bc35edebf144091584adb520874 260 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site SYN_02819 1f2b2bc35edebf144091584adb520874 260 SUPERFAMILY SSF117143 92 220 2.48E-32 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like SYN_02819 1f2b2bc35edebf144091584adb520874 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 135 1.7E-45 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G SYN_02819 1f2b2bc35edebf144091584adb520874 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 241 6.5E-29 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G SYN_02819 1f2b2bc35edebf144091584adb520874 260 Pfam PF00460 Flagella basal body rod protein 5 35 2.8E-14 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SYN_02819 1f2b2bc35edebf144091584adb520874 260 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 180 258 2.5E-22 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SYN_01746 1fefc8e958923cbac5d2a5dc743bdd38 361 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 5 144 1.5E-35 T 11-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SYN_01746 1fefc8e958923cbac5d2a5dc743bdd38 361 SUPERFAMILY SSF53756 4 359 1.28E-109 T 11-10-2018 SYN_01746 1fefc8e958923cbac5d2a5dc743bdd38 361 Gene3D G3DSA:3.40.50.2000 6 349 7.0E-118 T 11-10-2018 SYN_01746 1fefc8e958923cbac5d2a5dc743bdd38 361 Gene3D G3DSA:3.40.50.2000 166 343 7.0E-118 T 11-10-2018 SYN_01746 1fefc8e958923cbac5d2a5dc743bdd38 361 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 5 359 35.508 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SYN_01746 1fefc8e958923cbac5d2a5dc743bdd38 361 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 186 339 4.2E-41 T 11-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 SYN_01746 1fefc8e958923cbac5d2a5dc743bdd38 361 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 3 353 7.7E-97 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SYN_03046 afe13ae633e74988442e108380a03045 279 PIRSF PIRSF010376 1 278 3.3E-82 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 SYN_03046 afe13ae633e74988442e108380a03045 279 Pfam PF08544 GHMP kinases C terminal 210 264 4.0E-10 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain SYN_03046 afe13ae633e74988442e108380a03045 279 Gene3D G3DSA:3.30.230.10 1 157 5.6E-55 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SYN_03046 afe13ae633e74988442e108380a03045 279 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 2 275 32.508 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 SYN_03046 afe13ae633e74988442e108380a03045 279 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 5 259 1.6E-68 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 SYN_03046 afe13ae633e74988442e108380a03045 279 SUPERFAMILY SSF55060 160 267 2.64E-26 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily SYN_03046 afe13ae633e74988442e108380a03045 279 SUPERFAMILY SSF54211 2 153 2.28E-41 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SYN_03046 afe13ae633e74988442e108380a03045 279 Gene3D G3DSA:3.30.70.890 159 278 4.8E-29 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily SYN_03046 afe13ae633e74988442e108380a03045 279 Pfam PF00288 GHMP kinases N terminal domain 85 142 3.4E-10 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 SYN_03595 344a46f368eafd39e5606f164ec9754b 220 Pfam PF01695 IstB-like ATP binding protein 62 200 6.5E-32 T 11-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 SYN_03595 344a46f368eafd39e5606f164ec9754b 220 Gene3D G3DSA:3.40.50.300 59 218 1.6E-24 T 11-10-2018 SYN_03595 344a46f368eafd39e5606f164ec9754b 220 PIRSF PIRSF003073 54 218 2.7E-36 T 11-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein SYN_01410 d331c33b511f02bb97e29d3aadcc9354 405 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 396 9.6E-56 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 SYN_01410 d331c33b511f02bb97e29d3aadcc9354 405 SUPERFAMILY SSF53659 3 403 1.21E-122 T 11-10-2018 SYN_01410 d331c33b511f02bb97e29d3aadcc9354 405 TIGRFAM TIGR00127 nadp_idh_euk: isocitrate dehydrogenase, NADP-dependent 3 404 1.0E-157 T 11-10-2018 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 SYN_01410 d331c33b511f02bb97e29d3aadcc9354 405 PIRSF PIRSF000108 1 405 1.2E-186 T 11-10-2018 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 SYN_01410 d331c33b511f02bb97e29d3aadcc9354 405 SMART SM01329 10 396 1.8E-94 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 SYN_01410 d331c33b511f02bb97e29d3aadcc9354 405 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 270 289 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 SYN_01410 d331c33b511f02bb97e29d3aadcc9354 405 Gene3D G3DSA:3.40.718.10 3 404 4.4E-174 T 11-10-2018 SYN_00996 2baa8a5d98c5601cd82299cb300dfd6b 444 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 438 34.398 T 11-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 SYN_00996 2baa8a5d98c5601cd82299cb300dfd6b 444 Pfam PF02978 Signal peptide binding domain 326 425 7.5E-32 T 11-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 SYN_00996 2baa8a5d98c5601cd82299cb300dfd6b 444 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 427 7.3E-180 T 11-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 SYN_00996 2baa8a5d98c5601cd82299cb300dfd6b 444 SUPERFAMILY SSF47446 326 428 4.91E-35 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 SYN_00996 2baa8a5d98c5601cd82299cb300dfd6b 444 Gene3D G3DSA:1.20.120.140 4 305 7.2E-128 T 11-10-2018 SYN_00996 2baa8a5d98c5601cd82299cb300dfd6b 444 SUPERFAMILY SSF52540 42 353 6.02E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00996 2baa8a5d98c5601cd82299cb300dfd6b 444 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 268 281 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SYN_00996 2baa8a5d98c5601cd82299cb300dfd6b 444 Pfam PF00448 SRP54-type protein, GTPase domain 102 295 1.1E-74 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SYN_00996 2baa8a5d98c5601cd82299cb300dfd6b 444 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.6E-25 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SYN_00996 2baa8a5d98c5601cd82299cb300dfd6b 444 Gene3D G3DSA:1.10.260.30 326 442 1.1E-40 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 SYN_00996 2baa8a5d98c5601cd82299cb300dfd6b 444 SMART SM00963 1 86 3.6E-37 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SYN_00996 2baa8a5d98c5601cd82299cb300dfd6b 444 Gene3D G3DSA:3.40.50.300 90 284 7.2E-128 T 11-10-2018 SYN_00996 2baa8a5d98c5601cd82299cb300dfd6b 444 SMART SM00962 100 295 3.7E-109 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SYN_00996 2baa8a5d98c5601cd82299cb300dfd6b 444 SMART SM00382 99 300 7.2E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01520 ef2b2fe49eae703f4b9bb3e5a2535110 427 Pfam PF01964 Radical SAM ThiC family 2 421 3.9E-189 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 SYN_01520 ef2b2fe49eae703f4b9bb3e5a2535110 427 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 1 427 88.286 T 11-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 SYN_01520 ef2b2fe49eae703f4b9bb3e5a2535110 427 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 1 422 1.9E-180 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 SYN_01520 ef2b2fe49eae703f4b9bb3e5a2535110 427 Gene3D G3DSA:3.20.20.540 43 363 2.4E-142 T 11-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 SYN_00988 7ff6e1ba7dcffcc17426ac16f50fe3f7 273 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 272 6.2E-130 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 SYN_00988 7ff6e1ba7dcffcc17426ac16f50fe3f7 273 SMART SM01383 42 118 4.1E-43 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_00988 7ff6e1ba7dcffcc17426ac16f50fe3f7 273 PIRSF PIRSF002158 4 273 5.1E-96 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_00988 7ff6e1ba7dcffcc17426ac16f50fe3f7 273 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 48.148 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 SYN_00988 7ff6e1ba7dcffcc17426ac16f50fe3f7 273 SUPERFAMILY SSF50249 2 125 6.51E-49 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_00988 7ff6e1ba7dcffcc17426ac16f50fe3f7 273 Gene3D G3DSA:4.10.950.10 197 273 4.8E-34 T 11-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00988 7ff6e1ba7dcffcc17426ac16f50fe3f7 273 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 1.1E-57 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 SYN_00988 7ff6e1ba7dcffcc17426ac16f50fe3f7 273 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 11-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00988 7ff6e1ba7dcffcc17426ac16f50fe3f7 273 SUPERFAMILY SSF50104 127 272 9.63E-63 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily SYN_00988 7ff6e1ba7dcffcc17426ac16f50fe3f7 273 Gene3D G3DSA:2.30.30.30 118 196 6.7E-34 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 SYN_00988 7ff6e1ba7dcffcc17426ac16f50fe3f7 273 SMART SM01382 124 252 1.1E-93 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 SYN_00988 7ff6e1ba7dcffcc17426ac16f50fe3f7 273 Gene3D G3DSA:2.40.50.140 1 114 1.8E-46 T 11-10-2018 SYN_00988 7ff6e1ba7dcffcc17426ac16f50fe3f7 273 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 4.9E-32 T 11-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_02948 d018787c4ac08b208f0e4fa75300a2f2 456 Gene3D G3DSA:2.40.420.20 325 416 2.3E-23 T 11-10-2018 SYN_02948 d018787c4ac08b208f0e4fa75300a2f2 456 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 86 414 2.0E-79 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 SYN_02948 d018787c4ac08b208f0e4fa75300a2f2 456 Gene3D G3DSA:2.40.30.170 104 324 1.4E-70 T 11-10-2018 SYN_02948 d018787c4ac08b208f0e4fa75300a2f2 456 Gene3D G3DSA:2.40.50.100 110 254 1.4E-70 T 11-10-2018 SYN_02948 d018787c4ac08b208f0e4fa75300a2f2 456 SUPERFAMILY SSF111369 99 339 3.4E-59 T 11-10-2018 SYN_02948 d018787c4ac08b208f0e4fa75300a2f2 456 Gene3D G3DSA:1.10.287.470 145 218 1.4E-70 T 11-10-2018 SYN_02948 d018787c4ac08b208f0e4fa75300a2f2 456 Pfam PF13533 Biotin-lipoyl like 112 158 2.2E-12 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain SYN_00564 75722cfd26f98fe0639785ab353c375d 347 Pfam PF01370 NAD dependent epimerase/dehydratase family 25 262 1.6E-28 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 SYN_00564 75722cfd26f98fe0639785ab353c375d 347 Gene3D G3DSA:3.40.50.720 20 338 5.3E-106 T 11-10-2018 SYN_00564 75722cfd26f98fe0639785ab353c375d 347 SUPERFAMILY SSF51735 21 332 3.64E-58 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_00057 28c82618adf5809170bc6f51ea9079ac 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 288 7.8E-22 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 SYN_00057 28c82618adf5809170bc6f51ea9079ac 295 SUPERFAMILY SSF161098 8 282 1.31E-39 T 11-10-2018 IPR035906 MetI-like superfamily SYN_00057 28c82618adf5809170bc6f51ea9079ac 295 Gene3D G3DSA:1.10.3720.10 62 290 2.9E-38 T 11-10-2018 IPR035906 MetI-like superfamily SYN_00057 28c82618adf5809170bc6f51ea9079ac 295 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 7 287 1.6E-91 T 11-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 SYN_02423 cff00d324ad806f9b1cc137625406f6b 920 Gene3D G3DSA:3.30.70.20 807 909 5.9E-12 T 11-10-2018 SYN_02423 cff00d324ad806f9b1cc137625406f6b 920 Pfam PF12838 4Fe-4S dicluster domain 840 888 2.9E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_02423 cff00d324ad806f9b1cc137625406f6b 920 Gene3D G3DSA:3.50.50.60 487 705 7.2E-20 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_02423 cff00d324ad806f9b1cc137625406f6b 920 SUPERFAMILY SSF54862 637 899 2.76E-19 T 11-10-2018 SYN_02423 cff00d324ad806f9b1cc137625406f6b 920 SUPERFAMILY SSF51905 486 815 2.33E-22 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_02423 cff00d324ad806f9b1cc137625406f6b 920 Gene3D G3DSA:3.30.70.3270 1 100 1.2E-5 T 11-10-2018 SYN_02423 cff00d324ad806f9b1cc137625406f6b 920 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 76 318 2.1E-10 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SYN_02423 cff00d324ad806f9b1cc137625406f6b 920 Gene3D G3DSA:3.50.50.60 183 256 5.1E-6 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_02423 cff00d324ad806f9b1cc137625406f6b 920 SUPERFAMILY SSF54862 2 74 7.28E-7 T 11-10-2018 SYN_02423 cff00d324ad806f9b1cc137625406f6b 920 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 4 15 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_02423 cff00d324ad806f9b1cc137625406f6b 920 Pfam PF00890 FAD binding domain 491 527 1.4E-7 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SYN_02423 cff00d324ad806f9b1cc137625406f6b 920 SUPERFAMILY SSF51905 56 325 7.12E-12 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_02423 cff00d324ad806f9b1cc137625406f6b 920 Gene3D G3DSA:3.50.50.60 257 320 5.1E-6 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_02092 b52583ed646d1d2a1cc368b3c3161a9a 462 SMART SM00304 207 259 8.9E-14 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SYN_02092 b52583ed646d1d2a1cc368b3c3161a9a 462 Gene3D G3DSA:1.20.1480.50 170 262 1.6E-15 T 11-10-2018 SYN_02092 b52583ed646d1d2a1cc368b3c3161a9a 462 Pfam PF00990 Diguanylate cyclase, GGDEF domain 266 364 1.4E-9 T 11-10-2018 IPR000160 GGDEF domain SYN_02092 b52583ed646d1d2a1cc368b3c3161a9a 462 SUPERFAMILY SSF55073 267 437 2.75E-16 T 11-10-2018 IPR029787 Nucleotide cyclase SYN_02092 b52583ed646d1d2a1cc368b3c3161a9a 462 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 275 360 2.8E-11 T 11-10-2018 IPR000160 GGDEF domain SYN_02092 b52583ed646d1d2a1cc368b3c3161a9a 462 Gene3D G3DSA:3.30.70.270 265 447 1.3E-16 T 11-10-2018 SYN_02092 b52583ed646d1d2a1cc368b3c3161a9a 462 SMART SM00267 250 433 6.8E-6 T 11-10-2018 IPR000160 GGDEF domain SYN_02092 b52583ed646d1d2a1cc368b3c3161a9a 462 Pfam PF00672 HAMP domain 209 255 2.5E-14 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SYN_02092 b52583ed646d1d2a1cc368b3c3161a9a 462 SUPERFAMILY SSF158472 209 256 8.63E-12 T 11-10-2018 SYN_01665 4deb8cc53f8318292528303c93ceb0bb 255 PRINTS PR00164 ABC-2 type transport system membrane protein signature 26 47 7.7E-13 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 SYN_01665 4deb8cc53f8318292528303c93ceb0bb 255 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 7.7E-13 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 SYN_01665 4deb8cc53f8318292528303c93ceb0bb 255 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 7.7E-13 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 SYN_01665 4deb8cc53f8318292528303c93ceb0bb 255 PRINTS PR00164 ABC-2 type transport system membrane protein signature 139 163 7.7E-13 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 SYN_01665 4deb8cc53f8318292528303c93ceb0bb 255 PIRSF PIRSF006648 2 252 1.9E-53 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 SYN_01665 4deb8cc53f8318292528303c93ceb0bb 255 Pfam PF01061 ABC-2 type transporter 10 218 9.2E-36 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 SYN_00610 a31b750763146c518e3e2bf668c571ea 538 Pfam PF00005 ABC transporter 77 220 2.2E-15 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_00610 a31b750763146c518e3e2bf668c571ea 538 Pfam PF00005 ABC transporter 331 483 2.4E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_00610 a31b750763146c518e3e2bf668c571ea 538 SUPERFAMILY SSF52540 311 533 8.16E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00610 a31b750763146c518e3e2bf668c571ea 538 SMART SM00382 81 268 6.9E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00610 a31b750763146c518e3e2bf668c571ea 538 SMART SM00382 340 533 9.2E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00610 a31b750763146c518e3e2bf668c571ea 538 SUPERFAMILY SSF52540 48 282 8.62E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00610 a31b750763146c518e3e2bf668c571ea 538 ProSitePatterns PS00211 ABC transporters family signature. 456 470 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_00610 a31b750763146c518e3e2bf668c571ea 538 Gene3D G3DSA:3.40.50.300 37 289 8.6E-43 T 11-10-2018 SYN_00610 a31b750763146c518e3e2bf668c571ea 538 Gene3D G3DSA:3.40.50.300 304 535 6.2E-54 T 11-10-2018 SYN_03119 1788b7086dfb178e30c791e21eaa9f74 509 Pfam PF00483 Nucleotidyl transferase 16 312 3.6E-62 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 SYN_03119 1788b7086dfb178e30c791e21eaa9f74 509 SUPERFAMILY SSF51182 203 494 9.4E-76 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily SYN_03119 1788b7086dfb178e30c791e21eaa9f74 509 Gene3D G3DSA:2.60.120.10 379 483 3.0E-18 T 11-10-2018 IPR014710 RmlC-like jelly roll fold SYN_03119 1788b7086dfb178e30c791e21eaa9f74 509 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 14 494 1.8E-190 T 11-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 SYN_03119 1788b7086dfb178e30c791e21eaa9f74 509 Gene3D G3DSA:3.90.550.10 14 376 2.4E-110 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_03119 1788b7086dfb178e30c791e21eaa9f74 509 Pfam PF01050 Mannose-6-phosphate isomerase 340 490 8.5E-60 T 11-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 SYN_03119 1788b7086dfb178e30c791e21eaa9f74 509 SUPERFAMILY SSF53448 13 306 3.15E-64 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_01701 78ccd25707a9680845308e16613fba3c 506 SMART SM00387 398 506 5.9E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_01701 78ccd25707a9680845308e16613fba3c 506 Gene3D G3DSA:1.10.287.130 295 353 1.3E-14 T 11-10-2018 SYN_01701 78ccd25707a9680845308e16613fba3c 506 SUPERFAMILY SSF47384 286 352 6.08E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SYN_01701 78ccd25707a9680845308e16613fba3c 506 SUPERFAMILY SSF55874 346 504 1.31E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_01701 78ccd25707a9680845308e16613fba3c 506 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 399 504 1.7E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_01701 78ccd25707a9680845308e16613fba3c 506 Pfam PF00512 His Kinase A (phospho-acceptor) domain 292 352 1.1E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_01701 78ccd25707a9680845308e16613fba3c 506 SMART SM00388 291 356 3.7E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_01701 78ccd25707a9680845308e16613fba3c 506 Gene3D G3DSA:3.30.565.10 355 506 1.1E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_01701 78ccd25707a9680845308e16613fba3c 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 486 4.4E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01701 78ccd25707a9680845308e16613fba3c 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 505 4.4E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01701 78ccd25707a9680845308e16613fba3c 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 453 4.4E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01701 78ccd25707a9680845308e16613fba3c 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 467 4.4E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_00368 48ea23834b1bf36d808972395c9f6eb7 388 Gene3D G3DSA:3.40.50.11890 36 162 3.0E-26 T 11-10-2018 SYN_00368 48ea23834b1bf36d808972395c9f6eb7 388 Gene3D G3DSA:3.40.50.11900 244 388 7.6E-37 T 11-10-2018 SYN_00368 48ea23834b1bf36d808972395c9f6eb7 388 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 43 387 1.1E-63 T 11-10-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit SYN_00368 48ea23834b1bf36d808972395c9f6eb7 388 Gene3D G3DSA:1.20.1270.370 27 225 3.0E-26 T 11-10-2018 SYN_02529 3a66d5f21d24c80310b3f764e3238a25 586 Gene3D G3DSA:3.10.310.30 343 466 1.0E-36 T 11-10-2018 SYN_02529 3a66d5f21d24c80310b3f764e3238a25 586 Pfam PF02272 DHHA1 domain 338 462 9.5E-19 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 SYN_02529 3a66d5f21d24c80310b3f764e3238a25 586 Pfam PF01368 DHH family 94 217 1.8E-9 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 SYN_02529 3a66d5f21d24c80310b3f764e3238a25 586 Gene3D G3DSA:3.90.1640.30 68 342 2.8E-91 T 11-10-2018 SYN_02529 3a66d5f21d24c80310b3f764e3238a25 586 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 41 581 7.6E-172 T 11-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 SYN_02529 3a66d5f21d24c80310b3f764e3238a25 586 SUPERFAMILY SSF64182 68 468 1.83E-118 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily SYN_02009 39192fdf8358bf9b5d8b4fde76fae625 174 SUPERFAMILY SSF53335 3 154 6.54E-20 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_02009 39192fdf8358bf9b5d8b4fde76fae625 174 Gene3D G3DSA:3.40.50.150 1 172 7.8E-23 T 11-10-2018 SYN_02009 39192fdf8358bf9b5d8b4fde76fae625 174 Pfam PF03848 Tellurite resistance protein TehB 22 157 8.2E-10 T 11-10-2018 IPR015985 Tellurite resistance methyltransferase TehB-like domain SYN_03611 67a1e0dc2b3e3491515dcd933ce0dec5 210 SMART SM00471 41 148 9.5E-5 T 11-10-2018 IPR003607 HD/PDEase domain SYN_03611 67a1e0dc2b3e3491515dcd933ce0dec5 210 Pfam PF13328 HD domain 25 157 8.5E-26 T 11-10-2018 IPR003607 HD/PDEase domain SYN_03611 67a1e0dc2b3e3491515dcd933ce0dec5 210 SUPERFAMILY SSF109604 16 173 3.71E-37 T 11-10-2018 SYN_03611 67a1e0dc2b3e3491515dcd933ce0dec5 210 Gene3D G3DSA:1.10.3210.10 15 180 2.4E-45 T 11-10-2018 SYN_01725 e8ab87e0627ea6f46d2d64f96cd1f443 120 SMART SM00422 12 82 1.1E-8 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SYN_01725 e8ab87e0627ea6f46d2d64f96cd1f443 120 Gene3D G3DSA:1.10.1660.10 7 83 8.9E-21 T 11-10-2018 SYN_01725 e8ab87e0627ea6f46d2d64f96cd1f443 120 SUPERFAMILY SSF46955 12 115 1.51E-15 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily SYN_01725 e8ab87e0627ea6f46d2d64f96cd1f443 120 Pfam PF13411 MerR HTH family regulatory protein 12 77 2.9E-20 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SYN_01137 caad017d5114608b95e1c1e456dd1bc0 499 Gene3D G3DSA:2.160.20.10 18 350 3.1E-65 T 11-10-2018 IPR012334 Pectin lyase fold SYN_01137 caad017d5114608b95e1c1e456dd1bc0 499 Pfam PF00544 Pectate lyase 120 265 2.5E-5 T 11-10-2018 IPR002022 Pectate lyase SYN_01137 caad017d5114608b95e1c1e456dd1bc0 499 SUPERFAMILY SSF51126 23 367 3.14E-45 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor SYN_01954 d1ed7daecc6a24d7b7dc84b3ef4a33ed 519 SMART SM00086 124 164 0.0095 T 11-10-2018 IPR001610 PAC motif SYN_01954 d1ed7daecc6a24d7b7dc84b3ef4a33ed 519 SMART SM00086 248 289 1.8 T 11-10-2018 IPR001610 PAC motif SYN_01954 d1ed7daecc6a24d7b7dc84b3ef4a33ed 519 SUPERFAMILY SSF55874 386 513 4.06E-18 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_01954 d1ed7daecc6a24d7b7dc84b3ef4a33ed 519 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 426 514 6.2E-9 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_01954 d1ed7daecc6a24d7b7dc84b3ef4a33ed 519 SUPERFAMILY SSF55785 194 298 4.61E-20 T 11-10-2018 IPR035965 PAS domain superfamily SYN_01954 d1ed7daecc6a24d7b7dc84b3ef4a33ed 519 Gene3D G3DSA:3.30.450.20 40 179 2.5E-20 T 11-10-2018 SYN_01954 d1ed7daecc6a24d7b7dc84b3ef4a33ed 519 Gene3D G3DSA:3.30.565.10 390 514 4.9E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_01954 d1ed7daecc6a24d7b7dc84b3ef4a33ed 519 SMART SM00387 421 515 1.3E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_01954 d1ed7daecc6a24d7b7dc84b3ef4a33ed 519 Pfam PF00989 PAS fold 180 286 7.1E-11 T 11-10-2018 IPR013767 PAS fold GO:0006355 SYN_01954 d1ed7daecc6a24d7b7dc84b3ef4a33ed 519 Gene3D G3DSA:3.30.450.20 180 307 8.5E-26 T 11-10-2018 SYN_01954 d1ed7daecc6a24d7b7dc84b3ef4a33ed 519 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 52 171 4.3E-20 T 11-10-2018 IPR000014 PAS domain SYN_01954 d1ed7daecc6a24d7b7dc84b3ef4a33ed 519 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 180 296 4.5E-19 T 11-10-2018 IPR000014 PAS domain SYN_01954 d1ed7daecc6a24d7b7dc84b3ef4a33ed 519 Pfam PF08447 PAS fold 76 151 3.5E-14 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 SYN_01954 d1ed7daecc6a24d7b7dc84b3ef4a33ed 519 SUPERFAMILY SSF55785 58 167 7.5E-21 T 11-10-2018 IPR035965 PAS domain superfamily SYN_01954 d1ed7daecc6a24d7b7dc84b3ef4a33ed 519 SMART SM00091 53 118 5.1E-7 T 11-10-2018 IPR000014 PAS domain SYN_01954 d1ed7daecc6a24d7b7dc84b3ef4a33ed 519 SMART SM00091 176 242 5.2E-4 T 11-10-2018 IPR000014 PAS domain SYN_01954 d1ed7daecc6a24d7b7dc84b3ef4a33ed 519 Pfam PF07730 Histidine kinase 317 383 1.1E-14 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 SYN_01539 079d26c803fa39d9f5ed1cab68451b8d 150 PRINTS PR01438 Universal stress protein signature 127 149 3.8E-22 T 11-10-2018 IPR006015 Universal stress protein A SYN_01539 079d26c803fa39d9f5ed1cab68451b8d 150 PRINTS PR01438 Universal stress protein signature 8 26 3.8E-22 T 11-10-2018 IPR006015 Universal stress protein A SYN_01539 079d26c803fa39d9f5ed1cab68451b8d 150 PRINTS PR01438 Universal stress protein signature 109 121 3.8E-22 T 11-10-2018 IPR006015 Universal stress protein A SYN_01539 079d26c803fa39d9f5ed1cab68451b8d 150 Gene3D G3DSA:3.40.50.620 5 150 7.4E-42 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_01539 079d26c803fa39d9f5ed1cab68451b8d 150 SUPERFAMILY SSF52402 7 149 1.93E-33 T 11-10-2018 SYN_01539 079d26c803fa39d9f5ed1cab68451b8d 150 Pfam PF00582 Universal stress protein family 7 149 1.3E-28 T 11-10-2018 IPR006016 UspA SYN_00477 67449a053d63409f831bea803dad129b 137 Pfam PF08753 NikR C terminal nickel binding domain 55 130 2.5E-33 T 11-10-2018 IPR014864 Transcription factor, NikR, nickel binding C-terminal SYN_00477 67449a053d63409f831bea803dad129b 137 Hamap MF_00476 Nickel-responsive regulator [nikR]. 4 133 29.401 T 11-10-2018 IPR022988 Nickel-responsive transcriptional regulator NikR GO:0003677|GO:0006355|GO:0010045|GO:0016151 SYN_00477 67449a053d63409f831bea803dad129b 137 Pfam PF01402 Ribbon-helix-helix protein, copG family 6 43 1.5E-6 T 11-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 SYN_00477 67449a053d63409f831bea803dad129b 137 SUPERFAMILY SSF55021 53 133 4.58E-29 T 11-10-2018 SYN_00477 67449a053d63409f831bea803dad129b 137 SUPERFAMILY SSF47598 3 50 2.67E-12 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 SYN_00477 67449a053d63409f831bea803dad129b 137 Gene3D G3DSA:1.10.1220.10 5 50 3.5E-19 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 SYN_00477 67449a053d63409f831bea803dad129b 137 Gene3D G3DSA:3.30.70.1150 51 136 1.7E-34 T 11-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal SYN_00283 5ec3cd2c6ceaaf680a4a79366d4ccec3 235 SMART SM00382 34 217 6.0E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00283 5ec3cd2c6ceaaf680a4a79366d4ccec3 235 Gene3D G3DSA:3.40.50.300 3 232 4.9E-62 T 11-10-2018 SYN_00283 5ec3cd2c6ceaaf680a4a79366d4ccec3 235 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_00283 5ec3cd2c6ceaaf680a4a79366d4ccec3 235 Pfam PF00005 ABC transporter 25 168 2.1E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_00283 5ec3cd2c6ceaaf680a4a79366d4ccec3 235 SUPERFAMILY SSF52540 6 221 6.35E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01390 545e778e2ff9b362e6b92f4b948e407b 299 SUPERFAMILY SSF52402 7 200 2.65E-15 T 11-10-2018 SYN_01390 545e778e2ff9b362e6b92f4b948e407b 299 Gene3D G3DSA:3.40.50.620 2 175 3.7E-26 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_01390 545e778e2ff9b362e6b92f4b948e407b 299 Pfam PF00764 Arginosuccinate synthase 12 296 3.3E-44 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SYN_01390 545e778e2ff9b362e6b92f4b948e407b 299 SUPERFAMILY SSF69864 180 298 1.18E-27 T 11-10-2018 SYN_01390 545e778e2ff9b362e6b92f4b948e407b 299 Gene3D G3DSA:3.90.1260.10 178 299 1.2E-31 T 11-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 SYN_02884 19aa2afbd54a91fbbe4d831fec843505 273 Pfam PF03099 Biotin/lipoate A/B protein ligase family 37 159 5.6E-14 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 SYN_02884 19aa2afbd54a91fbbe4d831fec843505 273 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 32 267 3.1E-57 T 11-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SYN_02884 19aa2afbd54a91fbbe4d831fec843505 273 SUPERFAMILY SSF50037 227 270 7.32E-6 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal SYN_02884 19aa2afbd54a91fbbe4d831fec843505 273 SUPERFAMILY SSF55681 18 220 4.76E-59 T 11-10-2018 SYN_02884 19aa2afbd54a91fbbe4d831fec843505 273 Gene3D G3DSA:2.30.30.100 225 271 1.1E-6 T 11-10-2018 SYN_02884 19aa2afbd54a91fbbe4d831fec843505 273 Gene3D G3DSA:3.30.930.10 13 221 1.9E-63 T 11-10-2018 SYN_02966 116dcfd0a58fe5703c0b77472e43412d 803 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 702 720 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 SYN_02966 116dcfd0a58fe5703c0b77472e43412d 803 Gene3D G3DSA:3.20.20.60 486 796 3.6E-101 T 11-10-2018 SYN_02966 116dcfd0a58fe5703c0b77472e43412d 803 Pfam PF00391 PEP-utilising enzyme, mobile domain 391 462 1.7E-22 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SYN_02966 116dcfd0a58fe5703c0b77472e43412d 803 PIRSF PIRSF000854 1 802 0.0 T 11-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 SYN_02966 116dcfd0a58fe5703c0b77472e43412d 803 SUPERFAMILY SSF52009 361 473 6.93E-27 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 SYN_02966 116dcfd0a58fe5703c0b77472e43412d 803 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 702 717 7.3E-5 T 11-10-2018 SYN_02966 116dcfd0a58fe5703c0b77472e43412d 803 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 719 734 7.3E-5 T 11-10-2018 SYN_02966 116dcfd0a58fe5703c0b77472e43412d 803 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 755 767 7.3E-5 T 11-10-2018 SYN_02966 116dcfd0a58fe5703c0b77472e43412d 803 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 421 432 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 SYN_02966 116dcfd0a58fe5703c0b77472e43412d 803 Gene3D G3DSA:3.30.1490.20 2 195 8.0E-73 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 SYN_02966 116dcfd0a58fe5703c0b77472e43412d 803 Gene3D G3DSA:3.30.470.20 196 363 7.3E-51 T 11-10-2018 SYN_02966 116dcfd0a58fe5703c0b77472e43412d 803 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 485 794 4.6E-63 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 SYN_02966 116dcfd0a58fe5703c0b77472e43412d 803 Gene3D G3DSA:3.50.30.10 364 472 2.7E-37 T 11-10-2018 SYN_02966 116dcfd0a58fe5703c0b77472e43412d 803 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 20 350 2.9E-115 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 SYN_02966 116dcfd0a58fe5703c0b77472e43412d 803 SUPERFAMILY SSF51621 469 797 4.19E-95 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 SYN_02966 116dcfd0a58fe5703c0b77472e43412d 803 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 6 798 0.0 T 11-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 SYN_02966 116dcfd0a58fe5703c0b77472e43412d 803 SUPERFAMILY SSF56059 3 388 2.24E-99 T 11-10-2018 SYN_00736 c569c2996b8c3b9167e17ee090cfdeb7 176 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 11 170 3.8E-30 T 11-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 SYN_00736 c569c2996b8c3b9167e17ee090cfdeb7 176 Pfam PF03843 Outer membrane lipoprotein Slp family 15 168 2.0E-48 T 11-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 SYN_00736 c569c2996b8c3b9167e17ee090cfdeb7 176 PIRSF PIRSF004982 1 176 2.4E-59 T 11-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 SYN_01456 399f1095883e452be085c8f86f2344d6 373 Pfam PF12698 ABC-2 family transporter protein 27 365 3.6E-47 T 11-10-2018 SYN_01456 399f1095883e452be085c8f86f2344d6 373 PRINTS PR00164 ABC-2 type transport system membrane protein signature 315 334 9.9E-8 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 SYN_01456 399f1095883e452be085c8f86f2344d6 373 PRINTS PR00164 ABC-2 type transport system membrane protein signature 258 282 9.9E-8 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 SYN_01456 399f1095883e452be085c8f86f2344d6 373 PRINTS PR00164 ABC-2 type transport system membrane protein signature 295 314 9.9E-8 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 SYN_02652 6050840e65a4bab6fbd3478cb948368f 314 Gene3D G3DSA:3.40.50.720 12 237 1.0E-54 T 11-10-2018 SYN_02652 6050840e65a4bab6fbd3478cb948368f 314 Pfam PF01370 NAD dependent epimerase/dehydratase family 12 228 2.0E-33 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 SYN_02652 6050840e65a4bab6fbd3478cb948368f 314 SUPERFAMILY SSF51735 10 307 4.6E-59 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_02652 6050840e65a4bab6fbd3478cb948368f 314 Gene3D G3DSA:3.90.25.10 177 300 1.0E-54 T 11-10-2018 SYN_02876 c8f7a98ddb37f1fda25dc93a141a32a1 235 Gene3D G3DSA:3.40.50.300 8 219 5.9E-70 T 11-10-2018 SYN_02876 c8f7a98ddb37f1fda25dc93a141a32a1 235 SUPERFAMILY SSF52540 13 211 1.81E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02876 c8f7a98ddb37f1fda25dc93a141a32a1 235 Pfam PF01121 Dephospho-CoA kinase 16 192 1.7E-47 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 SYN_02876 c8f7a98ddb37f1fda25dc93a141a32a1 235 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 13 211 26.03 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 SYN_02876 c8f7a98ddb37f1fda25dc93a141a32a1 235 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 16 202 2.7E-44 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 SYN_00696 2d12822d758c46520b75fbf8741990d2 125 Pfam PF12728 Helix-turn-helix domain 22 67 1.7E-9 T 11-10-2018 SYN_00696 2d12822d758c46520b75fbf8741990d2 125 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 23 65 4.8E-9 T 11-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 SYN_03643 dd8f205f7f7a324f027d6647ef015548 736 Pfam PF06480 FtsH Extracellular 89 197 3.6E-6 T 11-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 SYN_03643 dd8f205f7f7a324f027d6647ef015548 736 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 14 721 34.89 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 SYN_03643 dd8f205f7f7a324f027d6647ef015548 736 Pfam PF01434 Peptidase family M41 492 698 3.3E-70 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 SYN_03643 dd8f205f7f7a324f027d6647ef015548 736 SUPERFAMILY SSF52540 253 501 3.02E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_03643 dd8f205f7f7a324f027d6647ef015548 736 ProSitePatterns PS00674 AAA-protein family signature. 400 418 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 SYN_03643 dd8f205f7f7a324f027d6647ef015548 736 Gene3D G3DSA:1.10.8.60 431 506 1.4E-28 T 11-10-2018 SYN_03643 dd8f205f7f7a324f027d6647ef015548 736 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 207 699 1.4E-204 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 SYN_03643 dd8f205f7f7a324f027d6647ef015548 736 SUPERFAMILY SSF140990 511 701 1.07E-63 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 SYN_03643 dd8f205f7f7a324f027d6647ef015548 736 Gene3D G3DSA:1.20.58.760 507 702 8.6E-68 T 11-10-2018 SYN_03643 dd8f205f7f7a324f027d6647ef015548 736 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 297 428 2.5E-41 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 SYN_03643 dd8f205f7f7a324f027d6647ef015548 736 SMART SM00382 293 432 2.4E-22 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_03643 dd8f205f7f7a324f027d6647ef015548 736 Gene3D G3DSA:3.40.50.300 247 429 1.9E-63 T 11-10-2018 SYN_01988 75f944a1e6919f8f5af9ac4c6a35c712 453 TIGRFAM TIGR01415 trpB_rel: pyridoxal-phosphate dependent TrpB-like enzyme 13 428 6.2E-198 T 11-10-2018 IPR006316 Tryptophan synthase, beta chain-like GO:0000162|GO:0004834|GO:0030170 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SYN_01988 75f944a1e6919f8f5af9ac4c6a35c712 453 Gene3D G3DSA:3.40.50.1100 13 419 4.3E-167 T 11-10-2018 SYN_01988 75f944a1e6919f8f5af9ac4c6a35c712 453 PIRSF PIRSF500824 1 435 6.4E-207 T 11-10-2018 IPR006316 Tryptophan synthase, beta chain-like GO:0000162|GO:0004834|GO:0030170 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SYN_01988 75f944a1e6919f8f5af9ac4c6a35c712 453 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 77 412 2.4E-35 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme SYN_01988 75f944a1e6919f8f5af9ac4c6a35c712 453 Gene3D G3DSA:3.40.50.1100 14 238 4.3E-167 T 11-10-2018 SYN_01988 75f944a1e6919f8f5af9ac4c6a35c712 453 SUPERFAMILY SSF53686 27 425 2.23E-107 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme SYN_01988 75f944a1e6919f8f5af9ac4c6a35c712 453 PIRSF PIRSF001413 9 431 7.9E-117 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SYN_01988 75f944a1e6919f8f5af9ac4c6a35c712 453 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 21 426 39.446 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 SYN_02104 68163552a56b87e016d28a24925dece2 519 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 37 102 7.2E-7 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SYN_02104 68163552a56b87e016d28a24925dece2 519 SUPERFAMILY SSF52540 106 379 6.38E-95 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02104 68163552a56b87e016d28a24925dece2 519 SUPERFAMILY SSF47917 383 505 2.88E-32 T 11-10-2018 SYN_02104 68163552a56b87e016d28a24925dece2 519 Gene3D G3DSA:1.20.150.20 382 510 5.0E-33 T 11-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02104 68163552a56b87e016d28a24925dece2 519 Gene3D G3DSA:3.40.50.300 104 381 2.3E-116 T 11-10-2018 SYN_02104 68163552a56b87e016d28a24925dece2 519 TIGRFAM TIGR03324 alt_F1F0_F1_al: alternate F1F0 ATPase, F1 subunit alpha 12 507 5.5E-242 T 11-10-2018 IPR017710 Alternate ATP synthase, F1 complex, subunit alpha GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SYN_02104 68163552a56b87e016d28a24925dece2 519 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 11 512 40.992 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02104 68163552a56b87e016d28a24925dece2 519 SUPERFAMILY SSF50615 25 104 2.88E-18 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SYN_02104 68163552a56b87e016d28a24925dece2 519 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 365 374 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SYN_02104 68163552a56b87e016d28a24925dece2 519 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 381 504 2.9E-36 T 11-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02104 68163552a56b87e016d28a24925dece2 519 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 27 492 4.1E-189 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02104 68163552a56b87e016d28a24925dece2 519 Gene3D G3DSA:2.40.30.20 10 103 4.4E-19 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SYN_02104 68163552a56b87e016d28a24925dece2 519 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 159 374 2.2E-69 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SYN_00503 5f722950600bbe937dd51dd9302e08f2 449 Pfam PF13676 TIR domain 328 432 1.8E-22 T 11-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 SYN_00503 5f722950600bbe937dd51dd9302e08f2 449 Gene3D G3DSA:3.40.50.10140 319 444 2.2E-26 T 11-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily SYN_00503 5f722950600bbe937dd51dd9302e08f2 449 SUPERFAMILY SSF52200 322 429 1.7E-21 T 11-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily SYN_02225 3a3273bf2c4fa04d5b626f330f7e4d81 286 SUPERFAMILY SSF161098 24 277 5.42E-31 T 11-10-2018 IPR035906 MetI-like superfamily SYN_02225 3a3273bf2c4fa04d5b626f330f7e4d81 286 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 11 278 1.5E-59 T 11-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 SYN_02225 3a3273bf2c4fa04d5b626f330f7e4d81 286 Gene3D G3DSA:1.10.3720.10 55 282 1.3E-31 T 11-10-2018 IPR035906 MetI-like superfamily SYN_02225 3a3273bf2c4fa04d5b626f330f7e4d81 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 278 2.5E-16 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 SYN_01019 c5da806e72d3546742738994a18f8900 217 SMART SM00448 3 116 2.0E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_01019 c5da806e72d3546742738994a18f8900 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 1.4E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_01019 c5da806e72d3546742738994a18f8900 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 1.4E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_01019 c5da806e72d3546742738994a18f8900 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 1.4E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_01019 c5da806e72d3546742738994a18f8900 217 Gene3D G3DSA:3.40.50.12740 3 213 2.0E-69 T 11-10-2018 SYN_01019 c5da806e72d3546742738994a18f8900 217 SMART SM00421 150 207 1.9E-25 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_01019 c5da806e72d3546742738994a18f8900 217 SUPERFAMILY SSF52172 3 135 7.83E-37 T 11-10-2018 IPR011006 CheY-like superfamily SYN_01019 c5da806e72d3546742738994a18f8900 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_01019 c5da806e72d3546742738994a18f8900 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 207 1.0E-20 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_01019 c5da806e72d3546742738994a18f8900 217 Pfam PF00072 Response regulator receiver domain 5 117 3.0E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_01019 c5da806e72d3546742738994a18f8900 217 SUPERFAMILY SSF46894 149 213 1.16E-22 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SYN_00533 cca42f33f8cb71ade3431e007cd210ed 875 SMART SM00116 319 367 5.0 T 11-10-2018 IPR000644 CBS domain SYN_00533 cca42f33f8cb71ade3431e007cd210ed 875 SMART SM00116 382 429 6.5E-4 T 11-10-2018 IPR000644 CBS domain SYN_00533 cca42f33f8cb71ade3431e007cd210ed 875 Pfam PF01743 Poly A polymerase head domain 478 605 1.8E-26 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 SYN_00533 cca42f33f8cb71ade3431e007cd210ed 875 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 630 691 3.5E-10 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 SYN_00533 cca42f33f8cb71ade3431e007cd210ed 875 Gene3D G3DSA:3.10.310.30 188 301 1.8E-7 T 11-10-2018 SYN_00533 cca42f33f8cb71ade3431e007cd210ed 875 Gene3D G3DSA:3.30.460.10 445 600 4.6E-46 T 11-10-2018 SYN_00533 cca42f33f8cb71ade3431e007cd210ed 875 Pfam PF01368 DHH family 3 146 3.9E-9 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 SYN_00533 cca42f33f8cb71ade3431e007cd210ed 875 Gene3D G3DSA:3.90.1640.10 1 187 1.7E-23 T 11-10-2018 SYN_00533 cca42f33f8cb71ade3431e007cd210ed 875 SUPERFAMILY SSF81301 450 602 1.85E-30 T 11-10-2018 SYN_00533 cca42f33f8cb71ade3431e007cd210ed 875 SUPERFAMILY SSF81891 604 869 5.1E-37 T 11-10-2018 SYN_00533 cca42f33f8cb71ade3431e007cd210ed 875 Pfam PF02272 DHHA1 domain 181 302 6.3E-13 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 SYN_00533 cca42f33f8cb71ade3431e007cd210ed 875 Pfam PF00571 CBS domain 375 429 5.0E-9 T 11-10-2018 IPR000644 CBS domain SYN_00533 cca42f33f8cb71ade3431e007cd210ed 875 Gene3D G3DSA:1.10.3090.10 601 865 8.5E-70 T 11-10-2018 SYN_00533 cca42f33f8cb71ade3431e007cd210ed 875 SUPERFAMILY SSF54631 310 432 3.41E-24 T 11-10-2018 SYN_00533 cca42f33f8cb71ade3431e007cd210ed 875 Gene3D G3DSA:3.10.580.10 305 432 9.7E-23 T 11-10-2018 SYN_00533 cca42f33f8cb71ade3431e007cd210ed 875 SUPERFAMILY SSF64182 3 291 5.76E-47 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily SYN_02589 b14d8066d51c8b7300753e1a2be5b3c4 1066 Pfam PF02142 MGS-like domain 947 1033 2.1E-20 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain SYN_02589 b14d8066d51c8b7300753e1a2be5b3c4 1066 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 831 838 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SYN_02589 b14d8066d51c8b7300753e1a2be5b3c4 1066 Gene3D G3DSA:1.10.1030.10 403 517 8.9E-28 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_02589 b14d8066d51c8b7300753e1a2be5b3c4 1066 Gene3D G3DSA:3.40.50.20 527 655 3.7E-54 T 11-10-2018 SYN_02589 b14d8066d51c8b7300753e1a2be5b3c4 1066 Gene3D G3DSA:3.40.50.20 1 116 2.2E-47 T 11-10-2018 SYN_02589 b14d8066d51c8b7300753e1a2be5b3c4 1066 SUPERFAMILY SSF52440 550 668 1.58E-50 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily SYN_02589 b14d8066d51c8b7300753e1a2be5b3c4 1066 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 702 716 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SYN_02589 b14d8066d51c8b7300753e1a2be5b3c4 1066 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SYN_02589 b14d8066d51c8b7300753e1a2be5b3c4 1066 SUPERFAMILY SSF56059 128 398 1.4E-92 T 11-10-2018 SYN_02589 b14d8066d51c8b7300753e1a2be5b3c4 1066 SUPERFAMILY SSF56059 666 924 1.7E-95 T 11-10-2018 SYN_02589 b14d8066d51c8b7300753e1a2be5b3c4 1066 SMART SM00851 947 1033 3.1E-32 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain SYN_02589 b14d8066d51c8b7300753e1a2be5b3c4 1066 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 377 395 1.4E-59 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_02589 b14d8066d51c8b7300753e1a2be5b3c4 1066 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.4E-59 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_02589 b14d8066d51c8b7300753e1a2be5b3c4 1066 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.4E-59 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_02589 b14d8066d51c8b7300753e1a2be5b3c4 1066 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 1.4E-59 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_02589 b14d8066d51c8b7300753e1a2be5b3c4 1066 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.4E-59 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_02589 b14d8066d51c8b7300753e1a2be5b3c4 1066 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.4E-59 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_02589 b14d8066d51c8b7300753e1a2be5b3c4 1066 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.4E-59 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_02589 b14d8066d51c8b7300753e1a2be5b3c4 1066 Gene3D G3DSA:3.40.50.1380 928 1066 3.0E-42 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily SYN_02589 b14d8066d51c8b7300753e1a2be5b3c4 1066 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SYN_02589 b14d8066d51c8b7300753e1a2be5b3c4 1066 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 666 868 2.8E-35 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SYN_02589 b14d8066d51c8b7300753e1a2be5b3c4 1066 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 5.7E-56 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SYN_02589 b14d8066d51c8b7300753e1a2be5b3c4 1066 SUPERFAMILY SSF48108 393 545 9.02E-36 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_02589 b14d8066d51c8b7300753e1a2be5b3c4 1066 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1043 0.0 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_02589 b14d8066d51c8b7300753e1a2be5b3c4 1066 Gene3D G3DSA:3.30.470.20 658 927 1.2E-103 T 11-10-2018 SYN_02589 b14d8066d51c8b7300753e1a2be5b3c4 1066 SUPERFAMILY SSF52440 1 127 5.18E-48 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily SYN_02589 b14d8066d51c8b7300753e1a2be5b3c4 1066 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1054 12.027 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_02589 b14d8066d51c8b7300753e1a2be5b3c4 1066 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 423 540 1.1E-24 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_02589 b14d8066d51c8b7300753e1a2be5b3c4 1066 SMART SM01096 420 540 3.6E-41 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_02589 b14d8066d51c8b7300753e1a2be5b3c4 1066 SUPERFAMILY SSF52335 930 1064 5.49E-37 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily SYN_02589 b14d8066d51c8b7300753e1a2be5b3c4 1066 Gene3D G3DSA:3.30.470.20 119 400 2.5E-100 T 11-10-2018 SYN_02087 42df0e010aae58cac74a40fcba87c311 154 SUPERFAMILY SSF50475 13 152 1.28E-28 T 11-10-2018 SYN_02087 42df0e010aae58cac74a40fcba87c311 154 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 14 103 1.1E-13 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 SYN_02087 42df0e010aae58cac74a40fcba87c311 154 Gene3D G3DSA:2.30.110.10 8 154 6.7E-27 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 SYN_00354 4acd49d4dfd63505a9d694af35cd422f 180 Pfam PF04143 Sulphur transport 6 169 3.7E-24 T 11-10-2018 IPR007272 Sulphur transport domain SYN_02722 4a75e6446929bcac323d2a556fdadd8b 294 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 7 131 2.0E-18 T 11-10-2018 IPR000014 PAS domain SYN_02722 4a75e6446929bcac323d2a556fdadd8b 294 SUPERFAMILY SSF55785 15 127 5.31E-22 T 11-10-2018 IPR035965 PAS domain superfamily SYN_02722 4a75e6446929bcac323d2a556fdadd8b 294 Pfam PF00990 Diguanylate cyclase, GGDEF domain 136 292 1.4E-36 T 11-10-2018 IPR000160 GGDEF domain SYN_02722 4a75e6446929bcac323d2a556fdadd8b 294 SMART SM00267 124 294 7.9E-35 T 11-10-2018 IPR000160 GGDEF domain SYN_02722 4a75e6446929bcac323d2a556fdadd8b 294 Gene3D G3DSA:3.30.450.20 1 125 2.4E-21 T 11-10-2018 SYN_02722 4a75e6446929bcac323d2a556fdadd8b 294 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 133 292 1.0E-38 T 11-10-2018 IPR000160 GGDEF domain SYN_02722 4a75e6446929bcac323d2a556fdadd8b 294 Gene3D G3DSA:3.30.70.270 126 294 5.8E-44 T 11-10-2018 SYN_02722 4a75e6446929bcac323d2a556fdadd8b 294 SUPERFAMILY SSF55073 140 291 4.08E-38 T 11-10-2018 IPR029787 Nucleotide cyclase SYN_02722 4a75e6446929bcac323d2a556fdadd8b 294 Pfam PF00989 PAS fold 11 121 1.2E-12 T 11-10-2018 IPR013767 PAS fold GO:0006355 SYN_02722 4a75e6446929bcac323d2a556fdadd8b 294 SMART SM00091 10 76 4.6E-7 T 11-10-2018 IPR000014 PAS domain SYN_01575 69e25d097fcc3697a77c696a8b5bcc9d 407 SMART SM00954 147 292 3.0E-18 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 SYN_01575 69e25d097fcc3697a77c696a8b5bcc9d 407 SUPERFAMILY SSF81301 123 316 4.25E-29 T 11-10-2018 SYN_01575 69e25d097fcc3697a77c696a8b5bcc9d 407 Gene3D G3DSA:3.30.460.10 106 273 2.8E-14 T 11-10-2018 SYN_01575 69e25d097fcc3697a77c696a8b5bcc9d 407 Pfam PF04607 Region found in RelA / SpoT proteins 148 289 9.4E-26 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 SYN_02873 4d86fd74f076c4725fac2ae322386102 324 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 299 307 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 SYN_02873 4d86fd74f076c4725fac2ae322386102 324 SUPERFAMILY SSF53223 32 152 3.55E-36 T 11-10-2018 SYN_02873 4d86fd74f076c4725fac2ae322386102 324 Hamap MF_01576 Bifunctional protein FolD [folD]. 34 322 38.222 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 SYN_02873 4d86fd74f076c4725fac2ae322386102 324 SUPERFAMILY SSF51735 153 319 4.13E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_02873 4d86fd74f076c4725fac2ae322386102 324 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 154 319 1.6E-68 T 11-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 SYN_02873 4d86fd74f076c4725fac2ae322386102 324 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 36 151 2.4E-34 T 11-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 SYN_02873 4d86fd74f076c4725fac2ae322386102 324 Gene3D G3DSA:3.40.50.720 37 298 2.7E-109 T 11-10-2018 SYN_02873 4d86fd74f076c4725fac2ae322386102 324 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 278 294 6.9E-81 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 SYN_02873 4d86fd74f076c4725fac2ae322386102 324 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 105 132 6.9E-81 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 SYN_02873 4d86fd74f076c4725fac2ae322386102 324 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 238 267 6.9E-81 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 SYN_02873 4d86fd74f076c4725fac2ae322386102 324 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 185 205 6.9E-81 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 SYN_02873 4d86fd74f076c4725fac2ae322386102 324 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 295 313 6.9E-81 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 SYN_02873 4d86fd74f076c4725fac2ae322386102 324 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 64 86 6.9E-81 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 SYN_02873 4d86fd74f076c4725fac2ae322386102 324 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 140 161 6.9E-81 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 SYN_02873 4d86fd74f076c4725fac2ae322386102 324 Gene3D G3DSA:3.40.50.10860 39 315 2.7E-109 T 11-10-2018 SYN_01003 48ea008bed52f6a43187d6829d09bf4d 214 SUPERFAMILY SSF52949 34 212 3.53E-65 T 11-10-2018 SYN_01003 48ea008bed52f6a43187d6829d09bf4d 214 Pfam PF01661 Macro domain 59 171 1.3E-41 T 11-10-2018 IPR002589 Macro domain SYN_01003 48ea008bed52f6a43187d6829d09bf4d 214 SMART SM00506 42 171 1.6E-49 T 11-10-2018 IPR002589 Macro domain SYN_01003 48ea008bed52f6a43187d6829d09bf4d 214 Gene3D G3DSA:3.40.220.10 15 214 2.2E-72 T 11-10-2018 SYN_02277 59ba802b97af9dff6e28a00006beef01 319 Gene3D G3DSA:3.40.50.150 116 318 2.6E-57 T 11-10-2018 SYN_02277 59ba802b97af9dff6e28a00006beef01 319 SUPERFAMILY SSF53335 79 312 1.94E-42 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_02277 59ba802b97af9dff6e28a00006beef01 319 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 15 314 32.343 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SYN_02277 59ba802b97af9dff6e28a00006beef01 319 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 14 314 4.7E-77 T 11-10-2018 SYN_02277 59ba802b97af9dff6e28a00006beef01 319 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 15 308 1.5E-59 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SYN_02277 59ba802b97af9dff6e28a00006beef01 319 PIRSF PIRSF000401 13 316 2.5E-76 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SYN_01993 47e7779a4a78ccc8af1baffc5d8e18e7 394 Gene3D G3DSA:2.40.30.170 45 298 6.1E-85 T 11-10-2018 SYN_01993 47e7779a4a78ccc8af1baffc5d8e18e7 394 Gene3D G3DSA:1.10.287.470 90 181 6.1E-85 T 11-10-2018 SYN_01993 47e7779a4a78ccc8af1baffc5d8e18e7 394 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 372 4.3E-47 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 SYN_01993 47e7779a4a78ccc8af1baffc5d8e18e7 394 Gene3D G3DSA:2.40.50.100 56 219 6.1E-85 T 11-10-2018 SYN_01993 47e7779a4a78ccc8af1baffc5d8e18e7 394 SUPERFAMILY SSF111369 45 295 9.94E-29 T 11-10-2018 SYN_01993 47e7779a4a78ccc8af1baffc5d8e18e7 394 Gene3D G3DSA:2.40.420.20 40 372 6.1E-85 T 11-10-2018 SYN_01993 47e7779a4a78ccc8af1baffc5d8e18e7 394 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 43 291 7.0E-26 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SYN_00062 9cc21c28a85da0da945b5fedd1d25038 96 Gene3D G3DSA:2.30.33.40 1 96 2.3E-42 T 11-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 SYN_00062 9cc21c28a85da0da945b5fedd1d25038 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 29.022 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SYN_00062 9cc21c28a85da0da945b5fedd1d25038 96 SMART SM00883 2 94 4.4E-61 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SYN_00062 9cc21c28a85da0da945b5fedd1d25038 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 11-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 SYN_00062 9cc21c28a85da0da945b5fedd1d25038 96 SUPERFAMILY SSF50129 1 95 5.14E-39 T 11-10-2018 IPR011032 GroES-like superfamily SYN_00062 9cc21c28a85da0da945b5fedd1d25038 96 PRINTS PR00297 10kDa chaperonin signature 3 18 4.5E-35 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SYN_00062 9cc21c28a85da0da945b5fedd1d25038 96 PRINTS PR00297 10kDa chaperonin signature 81 94 4.5E-35 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SYN_00062 9cc21c28a85da0da945b5fedd1d25038 96 PRINTS PR00297 10kDa chaperonin signature 60 72 4.5E-35 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SYN_00062 9cc21c28a85da0da945b5fedd1d25038 96 PRINTS PR00297 10kDa chaperonin signature 25 46 4.5E-35 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SYN_00062 9cc21c28a85da0da945b5fedd1d25038 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 5.6E-39 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SYN_02537 d5dd17ba28d8865459599abeb8005ba3 657 Gene3D G3DSA:3.40.50.300 8 277 1.6E-82 T 11-10-2018 SYN_02537 d5dd17ba28d8865459599abeb8005ba3 657 SUPERFAMILY SSF52540 4 639 3.66E-141 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02537 d5dd17ba28d8865459599abeb8005ba3 657 Pfam PF13361 UvrD-like helicase C-terminal domain 282 615 1.7E-51 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SYN_02537 d5dd17ba28d8865459599abeb8005ba3 657 Gene3D G3DSA:1.10.486.10 386 546 4.8E-92 T 11-10-2018 SYN_02537 d5dd17ba28d8865459599abeb8005ba3 657 Gene3D G3DSA:3.40.50.300 284 634 4.8E-92 T 11-10-2018 SYN_02537 d5dd17ba28d8865459599abeb8005ba3 657 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 275 4.0E-64 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 SYN_02537 d5dd17ba28d8865459599abeb8005ba3 657 Gene3D G3DSA:1.10.10.160 108 193 1.6E-82 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily SYN_02555 f18639578037590db83fcf3ab030b21c 331 SUPERFAMILY SSF102114 52 305 8.63E-34 T 11-10-2018 SYN_02555 f18639578037590db83fcf3ab030b21c 331 Pfam PF04055 Radical SAM superfamily 61 203 9.9E-9 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_02555 f18639578037590db83fcf3ab030b21c 331 Gene3D G3DSA:3.20.20.70 56 310 9.1E-30 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_00909 585ef40b586ba4566db97a8683ac6b23 165 SUPERFAMILY SSF52374 2 157 3.22E-43 T 11-10-2018 SYN_00909 585ef40b586ba4566db97a8683ac6b23 165 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 59 6.7E-18 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SYN_00909 585ef40b586ba4566db97a8683ac6b23 165 Gene3D G3DSA:3.40.50.620 1 163 3.2E-55 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_00909 585ef40b586ba4566db97a8683ac6b23 165 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 34.211 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 SYN_00909 585ef40b586ba4566db97a8683ac6b23 165 Pfam PF01467 Cytidylyltransferase-like 6 135 2.7E-20 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SYN_00909 585ef40b586ba4566db97a8683ac6b23 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 5.4E-45 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 SYN_00909 585ef40b586ba4566db97a8683ac6b23 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 5.4E-45 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 SYN_00909 585ef40b586ba4566db97a8683ac6b23 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 5.4E-45 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 SYN_00909 585ef40b586ba4566db97a8683ac6b23 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 5.4E-45 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 SYN_00909 585ef40b586ba4566db97a8683ac6b23 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 5.4E-45 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 SYN_00909 585ef40b586ba4566db97a8683ac6b23 165 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 157 2.3E-56 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 SYN_00551 9ce728177689750c5726688ac9986b6c 630 Pfam PF00905 Penicillin binding protein transpeptidase domain 265 603 2.2E-83 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SYN_00551 9ce728177689750c5726688ac9986b6c 630 SUPERFAMILY SSF56601 248 609 3.24E-107 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like SYN_00551 9ce728177689750c5726688ac9986b6c 630 Gene3D G3DSA:3.40.710.10 243 615 1.8E-119 T 11-10-2018 SYN_00551 9ce728177689750c5726688ac9986b6c 630 SUPERFAMILY SSF56519 55 247 3.4E-43 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 SYN_00551 9ce728177689750c5726688ac9986b6c 630 Pfam PF03717 Penicillin-binding Protein dimerisation domain 63 232 3.2E-40 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SYN_00551 9ce728177689750c5726688ac9986b6c 630 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 19 607 1.4E-227 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 SYN_00551 9ce728177689750c5726688ac9986b6c 630 Gene3D G3DSA:3.90.1310.10 63 241 6.0E-40 T 11-10-2018 SYN_00551 9ce728177689750c5726688ac9986b6c 630 Gene3D G3DSA:3.30.1390.30 84 159 6.0E-40 T 11-10-2018 SYN_01720 70d7d3d172356b78d35312c9b43fc788 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01720 70d7d3d172356b78d35312c9b43fc788 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.3E-39 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01720 70d7d3d172356b78d35312c9b43fc788 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.3E-39 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01720 70d7d3d172356b78d35312c9b43fc788 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.3E-39 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01720 70d7d3d172356b78d35312c9b43fc788 119 Pfam PF00453 Ribosomal protein L20 3 109 9.9E-45 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01720 70d7d3d172356b78d35312c9b43fc788 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.372 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01720 70d7d3d172356b78d35312c9b43fc788 119 Gene3D G3DSA:1.10.720.90 2 55 1.5E-20 T 11-10-2018 SYN_01720 70d7d3d172356b78d35312c9b43fc788 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 113 2.2E-46 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01720 70d7d3d172356b78d35312c9b43fc788 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 23 70 5.0E-8 T 11-10-2018 SYN_01720 70d7d3d172356b78d35312c9b43fc788 119 Gene3D G3DSA:1.10.1900.20 56 118 2.1E-26 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01720 70d7d3d172356b78d35312c9b43fc788 119 SUPERFAMILY SSF74731 3 114 3.14E-45 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00557 bcddde9a3afb4cd20155018487905370 490 SUPERFAMILY SSF51569 100 485 2.75E-75 T 11-10-2018 SYN_00557 bcddde9a3afb4cd20155018487905370 490 Pfam PF01116 Fructose-bisphosphate aldolase class-II 112 398 8.8E-20 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SYN_00557 bcddde9a3afb4cd20155018487905370 490 Gene3D G3DSA:3.20.20.70 99 464 4.0E-54 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_02572 cdef9c993ef9997277864810391f8c45 283 SMART SM00382 32 192 1.3E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_02572 cdef9c993ef9997277864810391f8c45 283 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 36 183 2.3E-15 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 SYN_02572 cdef9c993ef9997277864810391f8c45 283 Gene3D G3DSA:3.40.50.300 19 199 6.8E-27 T 11-10-2018 SYN_02572 cdef9c993ef9997277864810391f8c45 283 SUPERFAMILY SSF52540 21 246 3.04E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01776 a3d0a854a799a2708a4f7b2e05756f46 367 Gene3D G3DSA:3.30.1490.300 98 157 2.0E-91 T 11-10-2018 SYN_01776 a3d0a854a799a2708a4f7b2e05756f46 367 Gene3D G3DSA:3.30.420.40 196 327 2.0E-91 T 11-10-2018 SYN_01776 a3d0a854a799a2708a4f7b2e05756f46 367 SUPERFAMILY SSF53067 80 185 3.24E-13 T 11-10-2018 SYN_01776 a3d0a854a799a2708a4f7b2e05756f46 367 SUPERFAMILY SSF53067 195 361 9.72E-23 T 11-10-2018 SYN_01776 a3d0a854a799a2708a4f7b2e05756f46 367 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 20 363 9.1E-75 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM SYN_01776 a3d0a854a799a2708a4f7b2e05756f46 367 Gene3D G3DSA:3.30.420.40 22 362 2.0E-91 T 11-10-2018 SYN_01776 a3d0a854a799a2708a4f7b2e05756f46 367 PIRSF PIRSF019169 8 365 1.1E-104 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM SYN_01776 a3d0a854a799a2708a4f7b2e05756f46 367 Pfam PF11104 Type IV pilus assembly protein PilM; 23 363 5.1E-80 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM SYN_00454 ec667afb947dd5e21f80343c981d3dc8 236 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 19 40 4.9E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site SYN_00454 ec667afb947dd5e21f80343c981d3dc8 236 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 19 39 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site SYN_00454 ec667afb947dd5e21f80343c981d3dc8 236 Pfam PF07963 Prokaryotic N-terminal methylation motif 18 40 3.0E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site SYN_01935 d5e77321ac2cc69d0b4a87eef81a9909 195 ProSitePatterns PS01128 Shikimate kinase signature. 67 92 - T 11-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 SYN_01935 d5e77321ac2cc69d0b4a87eef81a9909 195 SUPERFAMILY SSF52540 12 188 2.2E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01935 d5e77321ac2cc69d0b4a87eef81a9909 195 Hamap MF_00109 Shikimate kinase [aroK]. 11 189 26.564 T 11-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 SYN_01935 d5e77321ac2cc69d0b4a87eef81a9909 195 PRINTS PR01100 Shikimate kinase family signature 66 74 5.4E-20 T 11-10-2018 SYN_01935 d5e77321ac2cc69d0b4a87eef81a9909 195 PRINTS PR01100 Shikimate kinase family signature 84 93 5.4E-20 T 11-10-2018 SYN_01935 d5e77321ac2cc69d0b4a87eef81a9909 195 PRINTS PR01100 Shikimate kinase family signature 105 122 5.4E-20 T 11-10-2018 SYN_01935 d5e77321ac2cc69d0b4a87eef81a9909 195 PRINTS PR01100 Shikimate kinase family signature 38 51 5.4E-20 T 11-10-2018 SYN_01935 d5e77321ac2cc69d0b4a87eef81a9909 195 PRINTS PR01100 Shikimate kinase family signature 14 29 5.4E-20 T 11-10-2018 SYN_01935 d5e77321ac2cc69d0b4a87eef81a9909 195 Pfam PF01202 Shikimate kinase 20 187 1.2E-39 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 SYN_01935 d5e77321ac2cc69d0b4a87eef81a9909 195 Gene3D G3DSA:3.40.50.300 8 194 3.4E-53 T 11-10-2018 SYN_00941 e1ea5633f92c7d5260002a6283f32921 307 SUPERFAMILY SSF52540 19 176 8.09E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00941 e1ea5633f92c7d5260002a6283f32921 307 Gene3D G3DSA:3.40.50.300 63 186 1.0E-6 T 11-10-2018 SYN_00941 e1ea5633f92c7d5260002a6283f32921 307 PIRSF PIRSF005052 24 307 5.1E-104 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 SYN_00941 e1ea5633f92c7d5260002a6283f32921 307 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 24 306 40.416 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 SYN_00941 e1ea5633f92c7d5260002a6283f32921 307 Pfam PF03668 P-loop ATPase protein family 25 306 1.2E-95 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 SYN_00941 e1ea5633f92c7d5260002a6283f32921 307 Gene3D G3DSA:3.40.50.300 8 54 3.3E-5 T 11-10-2018 SYN_01217 f586359b28886f463ebfd8ee96273547 161 Pfam PF04982 HPP family 44 147 1.1E-19 T 11-10-2018 IPR007065 HPP SYN_02054 70795463a51cba5428e48f58ac29c292 241 PIRSF PIRSF003078 19 238 4.5E-48 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SYN_02054 70795463a51cba5428e48f58ac29c292 241 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 45 220 1.4E-46 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SYN_02054 70795463a51cba5428e48f58ac29c292 241 Pfam PF02527 rRNA small subunit methyltransferase G 41 208 2.2E-43 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SYN_02054 70795463a51cba5428e48f58ac29c292 241 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 33 233 26.03 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SYN_02054 70795463a51cba5428e48f58ac29c292 241 Gene3D G3DSA:3.40.50.150 12 240 8.5E-64 T 11-10-2018 SYN_02054 70795463a51cba5428e48f58ac29c292 241 SUPERFAMILY SSF53335 25 236 8.84E-34 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_00597 29bf90d3038ace6ef415ddd50f6bb6c7 76 SUPERFAMILY SSF159127 1 72 1.57E-21 T 11-10-2018 IPR037254 HupF/HypC superfamily SYN_00597 29bf90d3038ace6ef415ddd50f6bb6c7 76 Gene3D G3DSA:2.40.50.970 1 75 9.2E-25 T 11-10-2018 IPR037254 HupF/HypC superfamily SYN_00597 29bf90d3038ace6ef415ddd50f6bb6c7 76 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 73 5.6E-19 T 11-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SYN_00597 29bf90d3038ace6ef415ddd50f6bb6c7 76 Pfam PF01455 HupF/HypC family 1 67 1.3E-22 T 11-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SYN_00597 29bf90d3038ace6ef415ddd50f6bb6c7 76 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 58 70 4.1E-11 T 11-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SYN_00597 29bf90d3038ace6ef415ddd50f6bb6c7 76 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 18 34 4.1E-11 T 11-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SYN_00597 29bf90d3038ace6ef415ddd50f6bb6c7 76 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 40 56 4.1E-11 T 11-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SYN_00597 29bf90d3038ace6ef415ddd50f6bb6c7 76 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 4.1E-11 T 11-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC SYN_01068 45f4d150810df8b41a21cf7c8cd449b3 338 Pfam PF04280 Tim44-like domain 194 336 2.7E-39 T 11-10-2018 IPR007379 Tim44-like domain SYN_01068 45f4d150810df8b41a21cf7c8cd449b3 338 SMART SM00978 191 336 3.4E-43 T 11-10-2018 IPR007379 Tim44-like domain SYN_01068 45f4d150810df8b41a21cf7c8cd449b3 338 SUPERFAMILY SSF54427 188 336 8.32E-37 T 11-10-2018 IPR032710 NTF2-like domain superfamily SYN_01068 45f4d150810df8b41a21cf7c8cd449b3 338 Gene3D G3DSA:3.10.450.240 189 338 2.0E-22 T 11-10-2018 SYN_02373 6a20ee7738f297a844f2f98b54f46c21 161 SUPERFAMILY SSF48013 14 146 3.92E-35 T 11-10-2018 IPR035926 NusB-like superfamily SYN_02373 6a20ee7738f297a844f2f98b54f46c21 161 Pfam PF01029 NusB family 17 140 3.4E-36 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SYN_02373 6a20ee7738f297a844f2f98b54f46c21 161 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 13 145 20.62 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 SYN_02373 6a20ee7738f297a844f2f98b54f46c21 161 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 14 143 1.1E-39 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 SYN_02373 6a20ee7738f297a844f2f98b54f46c21 161 Gene3D G3DSA:1.10.940.10 12 155 6.1E-43 T 11-10-2018 IPR035926 NusB-like superfamily SYN_00983 dfa06584e59f890be15f6ce36bfa7add 397 Gene3D G3DSA:2.40.30.10 341 396 1.3E-27 T 11-10-2018 SYN_00983 dfa06584e59f890be15f6ce36bfa7add 397 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 397 1.8E-221 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SYN_00983 dfa06584e59f890be15f6ce36bfa7add 397 SUPERFAMILY SSF50465 301 396 1.93E-35 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SYN_00983 dfa06584e59f890be15f6ce36bfa7add 397 Pfam PF03143 Elongation factor Tu C-terminal domain 301 395 1.1E-34 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal SYN_00983 dfa06584e59f890be15f6ce36bfa7add 397 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 397 60.017 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 SYN_00983 dfa06584e59f890be15f6ce36bfa7add 397 SUPERFAMILY SSF50447 206 304 4.32E-30 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily SYN_00983 dfa06584e59f890be15f6ce36bfa7add 397 Gene3D G3DSA:2.40.30.10 209 337 1.4E-53 T 11-10-2018 SYN_00983 dfa06584e59f890be15f6ce36bfa7add 397 SUPERFAMILY SSF52540 9 229 2.7E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00983 dfa06584e59f890be15f6ce36bfa7add 397 Pfam PF03144 Elongation factor Tu domain 2 228 296 1.6E-15 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 SYN_00983 dfa06584e59f890be15f6ce36bfa7add 397 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site SYN_00983 dfa06584e59f890be15f6ce36bfa7add 397 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 147 6.1E-15 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 SYN_00983 dfa06584e59f890be15f6ce36bfa7add 397 Pfam PF00009 Elongation factor Tu GTP binding domain 10 204 2.4E-56 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_00983 dfa06584e59f890be15f6ce36bfa7add 397 Gene3D G3DSA:3.40.50.300 1 206 2.3E-70 T 11-10-2018 SYN_00983 dfa06584e59f890be15f6ce36bfa7add 397 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.7E-22 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_00983 dfa06584e59f890be15f6ce36bfa7add 397 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.7E-22 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_00983 dfa06584e59f890be15f6ce36bfa7add 397 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-22 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_00983 dfa06584e59f890be15f6ce36bfa7add 397 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.7E-22 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_00983 dfa06584e59f890be15f6ce36bfa7add 397 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.7E-22 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_02620 6a9d8012d9097d2f4a22e27f5777dd63 483 Gene3D G3DSA:3.30.300.30 378 476 1.0E-18 T 11-10-2018 SYN_02620 6a9d8012d9097d2f4a22e27f5777dd63 483 Pfam PF13193 AMP-binding enzyme C-terminal domain 388 459 2.7E-9 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain SYN_02620 6a9d8012d9097d2f4a22e27f5777dd63 483 Pfam PF00501 AMP-binding enzyme 19 379 6.8E-50 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 SYN_02620 6a9d8012d9097d2f4a22e27f5777dd63 483 Gene3D G3DSA:3.40.50.12780 6 376 1.4E-68 T 11-10-2018 SYN_02620 6a9d8012d9097d2f4a22e27f5777dd63 483 SUPERFAMILY SSF56801 16 473 8.37E-97 T 11-10-2018 SYN_00430 7786986d42b5a6be02e14aa97e123483 358 Gene3D G3DSA:3.40.50.2300 7 148 1.7E-31 T 11-10-2018 SYN_00430 7786986d42b5a6be02e14aa97e123483 358 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 10 354 33.627 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SYN_00430 7786986d42b5a6be02e14aa97e123483 358 Pfam PF01339 CheB methylesterase 173 348 1.3E-55 T 11-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SYN_00430 7786986d42b5a6be02e14aa97e123483 358 SMART SM00448 10 128 8.4E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00430 7786986d42b5a6be02e14aa97e123483 358 SUPERFAMILY SSF52172 8 136 1.99E-30 T 11-10-2018 IPR011006 CheY-like superfamily SYN_00430 7786986d42b5a6be02e14aa97e123483 358 SUPERFAMILY SSF52738 168 353 2.62E-63 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal SYN_00430 7786986d42b5a6be02e14aa97e123483 358 Gene3D G3DSA:3.40.50.180 162 356 3.7E-64 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal SYN_00430 7786986d42b5a6be02e14aa97e123483 358 PIRSF PIRSF000876 7 357 2.3E-112 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SYN_00430 7786986d42b5a6be02e14aa97e123483 358 Pfam PF00072 Response regulator receiver domain 12 116 1.0E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00574 ce077d99c7792c5f122182dce03ceb66 226 Pfam PF00027 Cyclic nucleotide-binding domain 30 115 7.4E-26 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain SYN_00574 ce077d99c7792c5f122182dce03ceb66 226 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 175 191 9.5E-5 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SYN_00574 ce077d99c7792c5f122182dce03ceb66 226 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 191 206 9.5E-5 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SYN_00574 ce077d99c7792c5f122182dce03ceb66 226 Pfam PF13545 Crp-like helix-turn-helix domain 150 223 7.1E-19 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SYN_00574 ce077d99c7792c5f122182dce03ceb66 226 Gene3D G3DSA:2.60.120.10 2 148 6.0E-44 T 11-10-2018 IPR014710 RmlC-like jelly roll fold SYN_00574 ce077d99c7792c5f122182dce03ceb66 226 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 80 97 - T 11-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site SYN_00574 ce077d99c7792c5f122182dce03ceb66 226 SMART SM00419 169 217 7.9E-10 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SYN_00574 ce077d99c7792c5f122182dce03ceb66 226 Gene3D G3DSA:1.10.10.10 149 226 1.3E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_00574 ce077d99c7792c5f122182dce03ceb66 226 PRINTS PR00103 cAMP-dependent protein kinase signature 48 62 3.2E-7 T 11-10-2018 SYN_00574 ce077d99c7792c5f122182dce03ceb66 226 PRINTS PR00103 cAMP-dependent protein kinase signature 78 87 3.2E-7 T 11-10-2018 SYN_00574 ce077d99c7792c5f122182dce03ceb66 226 PRINTS PR00103 cAMP-dependent protein kinase signature 90 101 3.2E-7 T 11-10-2018 SYN_00574 ce077d99c7792c5f122182dce03ceb66 226 PRINTS PR00103 cAMP-dependent protein kinase signature 33 47 3.2E-7 T 11-10-2018 SYN_00574 ce077d99c7792c5f122182dce03ceb66 226 SUPERFAMILY SSF51206 5 144 6.02E-40 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like SYN_00574 ce077d99c7792c5f122182dce03ceb66 226 SUPERFAMILY SSF46785 148 224 6.12E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_00574 ce077d99c7792c5f122182dce03ceb66 226 SMART SM00100 12 130 5.4E-27 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain SYN_01708 fee532793589113a471e086465cc9837 553 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 460 471 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 SYN_01708 fee532793589113a471e086465cc9837 553 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 119 129 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 SYN_01708 fee532793589113a471e086465cc9837 553 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 14 552 2.2E-246 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 SYN_01708 fee532793589113a471e086465cc9837 553 Pfam PF00920 Dehydratase family 31 549 2.3E-228 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 SYN_01708 fee532793589113a471e086465cc9837 553 SUPERFAMILY SSF143975 1 371 7.06E-142 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 SYN_01708 fee532793589113a471e086465cc9837 553 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 1 552 48.083 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 SYN_01708 fee532793589113a471e086465cc9837 553 Gene3D G3DSA:3.50.30.80 372 523 7.9E-55 T 11-10-2018 SYN_01708 fee532793589113a471e086465cc9837 553 SUPERFAMILY SSF52016 372 551 8.63E-62 T 11-10-2018 SYN_01350 5bc5cce26668baa8b7ac1a104f8926e7 385 Gene3D G3DSA:2.30.130.10 273 375 3.5E-33 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 SYN_01350 5bc5cce26668baa8b7ac1a104f8926e7 385 PRINTS PR00474 Glutamate 5-kinase family signature 83 111 1.7E-46 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 SYN_01350 5bc5cce26668baa8b7ac1a104f8926e7 385 PRINTS PR00474 Glutamate 5-kinase family signature 155 182 1.7E-46 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 SYN_01350 5bc5cce26668baa8b7ac1a104f8926e7 385 PRINTS PR00474 Glutamate 5-kinase family signature 123 144 1.7E-46 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 SYN_01350 5bc5cce26668baa8b7ac1a104f8926e7 385 PRINTS PR00474 Glutamate 5-kinase family signature 216 236 1.7E-46 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 SYN_01350 5bc5cce26668baa8b7ac1a104f8926e7 385 PRINTS PR00474 Glutamate 5-kinase family signature 49 63 1.7E-46 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 SYN_01350 5bc5cce26668baa8b7ac1a104f8926e7 385 PIRSF PIRSF000729 8 376 2.1E-132 T 11-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 SYN_01350 5bc5cce26668baa8b7ac1a104f8926e7 385 Gene3D G3DSA:3.40.1160.10 2 272 6.2E-88 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily SYN_01350 5bc5cce26668baa8b7ac1a104f8926e7 385 ProSitePatterns PS00902 Glutamate 5-kinase signature. 214 231 - T 11-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 SYN_01350 5bc5cce26668baa8b7ac1a104f8926e7 385 TIGRFAM TIGR01027 proB: glutamate 5-kinase 13 373 1.5E-126 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 SYN_01350 5bc5cce26668baa8b7ac1a104f8926e7 385 SMART SM00359 284 367 4.9E-13 T 11-10-2018 IPR002478 PUA domain GO:0003723 SYN_01350 5bc5cce26668baa8b7ac1a104f8926e7 385 Pfam PF00696 Amino acid kinase family 13 240 1.5E-36 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 SYN_01350 5bc5cce26668baa8b7ac1a104f8926e7 385 SUPERFAMILY SSF53633 13 264 2.75E-64 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily SYN_01350 5bc5cce26668baa8b7ac1a104f8926e7 385 Hamap MF_00456 Glutamate 5-kinase [proB]. 13 266 35.753 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 SYN_01350 5bc5cce26668baa8b7ac1a104f8926e7 385 Pfam PF01472 PUA domain 285 358 4.7E-20 T 11-10-2018 IPR002478 PUA domain GO:0003723 SYN_01350 5bc5cce26668baa8b7ac1a104f8926e7 385 SUPERFAMILY SSF88697 284 374 5.52E-24 T 11-10-2018 IPR015947 PUA-like superfamily SYN_00463 329b9d5a3438dceb0c8d99739433fda1 255 Pfam PF13649 Methyltransferase domain 40 134 6.4E-12 T 11-10-2018 SYN_00463 329b9d5a3438dceb0c8d99739433fda1 255 SUPERFAMILY SSF53335 16 248 3.16E-30 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_00463 329b9d5a3438dceb0c8d99739433fda1 255 PIRSF PIRSF034653 1 251 1.2E-113 T 11-10-2018 IPR017031 Predicted S-adenosyl-L-methionine dependent methyltransferase, YjhP-type SYN_00463 329b9d5a3438dceb0c8d99739433fda1 255 Gene3D G3DSA:3.40.50.150 1 248 6.1E-78 T 11-10-2018 SYN_02499 6e14e83e4ec6e4f06f3f2c0c3023fcf2 309 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 57 203 4.5E-33 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SYN_02499 6e14e83e4ec6e4f06f3f2c0c3023fcf2 309 Gene3D G3DSA:3.40.50.970 33 217 7.3E-27 T 11-10-2018 SYN_02499 6e14e83e4ec6e4f06f3f2c0c3023fcf2 309 SUPERFAMILY SSF52518 18 230 7.27E-69 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold SYN_00003 a1c70d7faf6d524723d0d832faf78cdd 85 Gene3D G3DSA:1.20.1280.290 1 85 3.9E-24 T 11-10-2018 SYN_00003 a1c70d7faf6d524723d0d832faf78cdd 85 Pfam PF04193 PQ loop repeat 5 57 2.8E-10 T 11-10-2018 IPR006603 PQ-loop repeat SYN_01748 9c7e72ca3aab5627aee7041766348c0e 312 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 312 85.744 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SYN_01748 9c7e72ca3aab5627aee7041766348c0e 312 Gene3D G3DSA:3.90.78.10 226 312 1.1E-31 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SYN_01748 9c7e72ca3aab5627aee7041766348c0e 312 SUPERFAMILY SSF56194 206 310 2.62E-34 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SYN_01748 9c7e72ca3aab5627aee7041766348c0e 312 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 29 309 6.4E-67 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SYN_01748 9c7e72ca3aab5627aee7041766348c0e 312 Gene3D G3DSA:3.30.43.10 10 93 3.0E-25 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 SYN_01748 9c7e72ca3aab5627aee7041766348c0e 312 Gene3D G3DSA:3.30.465.10 103 225 2.7E-37 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 SYN_01748 9c7e72ca3aab5627aee7041766348c0e 312 Pfam PF01565 FAD binding domain 42 168 1.3E-23 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 SYN_01748 9c7e72ca3aab5627aee7041766348c0e 312 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 210 308 1.6E-28 T 11-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SYN_01748 9c7e72ca3aab5627aee7041766348c0e 312 SUPERFAMILY SSF56176 29 217 2.71E-43 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 SYN_02940 7906bf6ce5a8be8913418536e97fe05d 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 1.6E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 SYN_02940 7906bf6ce5a8be8913418536e97fe05d 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 11 22 1.6E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 SYN_02940 7906bf6ce5a8be8913418536e97fe05d 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 1.6E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 SYN_02940 7906bf6ce5a8be8913418536e97fe05d 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 1.6E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 SYN_02940 7906bf6ce5a8be8913418536e97fe05d 220 Gene3D G3DSA:3.40.50.1000 10 207 3.5E-29 T 11-10-2018 IPR023214 HAD superfamily SYN_02940 7906bf6ce5a8be8913418536e97fe05d 220 SUPERFAMILY SSF56784 13 199 4.4E-25 T 11-10-2018 IPR036412 HAD-like superfamily SYN_02123 953c3b28ace416b5b8cb067ce1fcaa95 236 PRINTS PR00163 Rubredoxin signature 186 202 9.4E-13 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 SYN_02123 953c3b28ace416b5b8cb067ce1fcaa95 236 PRINTS PR00163 Rubredoxin signature 216 232 9.4E-13 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 SYN_02123 953c3b28ace416b5b8cb067ce1fcaa95 236 SUPERFAMILY SSF57802 183 234 1.33E-23 T 11-10-2018 SYN_02123 953c3b28ace416b5b8cb067ce1fcaa95 236 Pfam PF01613 Flavin reductase like domain 11 150 4.5E-26 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 SYN_02123 953c3b28ace416b5b8cb067ce1fcaa95 236 SMART SM00903 8 158 1.4E-28 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 SYN_02123 953c3b28ace416b5b8cb067ce1fcaa95 236 Gene3D G3DSA:2.30.110.10 3 171 6.5E-42 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 SYN_02123 953c3b28ace416b5b8cb067ce1fcaa95 236 SUPERFAMILY SSF50475 7 153 1.03E-37 T 11-10-2018 SYN_02123 953c3b28ace416b5b8cb067ce1fcaa95 236 Gene3D G3DSA:2.20.28.10 183 234 3.7E-28 T 11-10-2018 SYN_02123 953c3b28ace416b5b8cb067ce1fcaa95 236 Pfam PF00301 Rubredoxin 186 232 7.3E-25 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 SYN_02123 953c3b28ace416b5b8cb067ce1fcaa95 236 ProSitePatterns PS00202 Rubredoxin signature. 216 226 - T 11-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 SYN_01215 88b9357516c451317b4c52cfb57c1be2 447 SUPERFAMILY SSF53383 43 443 1.69E-142 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SYN_01215 88b9357516c451317b4c52cfb57c1be2 447 Gene3D G3DSA:3.40.640.10 78 342 4.5E-173 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SYN_01215 88b9357516c451317b4c52cfb57c1be2 447 Pfam PF00202 Aminotransferase class-III 44 443 1.9E-133 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SYN_01215 88b9357516c451317b4c52cfb57c1be2 447 PIRSF PIRSF000521 29 147 6.4E-12 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SYN_01215 88b9357516c451317b4c52cfb57c1be2 447 PIRSF PIRSF000521 142 446 1.6E-45 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SYN_01215 88b9357516c451317b4c52cfb57c1be2 447 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 260 297 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SYN_01215 88b9357516c451317b4c52cfb57c1be2 447 Gene3D G3DSA:3.90.1150.10 25 441 4.5E-173 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SYN_01672 a0e48b85c20cadf6832b0da51ce68238 683 SUPERFAMILY SSF53706 4 545 4.19E-138 T 11-10-2018 SYN_01672 a0e48b85c20cadf6832b0da51ce68238 683 Gene3D G3DSA:2.20.25.90 1 57 1.4E-5 T 11-10-2018 SYN_01672 a0e48b85c20cadf6832b0da51ce68238 683 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 606 633 - T 11-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 SYN_01672 a0e48b85c20cadf6832b0da51ce68238 683 Gene3D G3DSA:3.40.50.740 58 504 1.8E-140 T 11-10-2018 SYN_01672 a0e48b85c20cadf6832b0da51ce68238 683 Pfam PF01568 Molydopterin dinucleotide binding domain 575 676 3.5E-26 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 SYN_01672 a0e48b85c20cadf6832b0da51ce68238 683 SUPERFAMILY SSF50692 523 682 3.16E-31 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily SYN_01672 a0e48b85c20cadf6832b0da51ce68238 683 Gene3D G3DSA:2.40.40.20 569 683 1.3E-27 T 11-10-2018 SYN_01672 a0e48b85c20cadf6832b0da51ce68238 683 Pfam PF00384 Molybdopterin oxidoreductase 382 471 7.8E-20 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_01672 a0e48b85c20cadf6832b0da51ce68238 683 Pfam PF00384 Molybdopterin oxidoreductase 57 319 3.6E-35 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_01672 a0e48b85c20cadf6832b0da51ce68238 683 SMART SM00926 1 54 0.0067 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_01672 a0e48b85c20cadf6832b0da51ce68238 683 Gene3D G3DSA:3.40.228.10 142 326 1.8E-140 T 11-10-2018 SYN_00759 70a054ee532a352cfbc33e8d436ba3f8 149 Pfam PF09424 Yqey-like protein 7 146 4.5E-49 T 11-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 SYN_00759 70a054ee532a352cfbc33e8d436ba3f8 149 Gene3D G3DSA:1.10.1510.10 1 90 8.8E-29 T 11-10-2018 SYN_00759 70a054ee532a352cfbc33e8d436ba3f8 149 Gene3D G3DSA:1.10.10.410 91 147 3.6E-20 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal SYN_00759 70a054ee532a352cfbc33e8d436ba3f8 149 SUPERFAMILY SSF89095 1 146 1.36E-41 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 SYN_01975 a89b788d7c0099bc7c1d0a07e0648531 341 PIRSF PIRSF000267 1 339 4.5E-119 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 SYN_01975 a89b788d7c0099bc7c1d0a07e0648531 341 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 4 326 1.2E-99 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 SYN_01975 a89b788d7c0099bc7c1d0a07e0648531 341 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 4 220 1.3E-64 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 SYN_03198 b8a0869f560c4a38129d9dc0897f103d 309 Gene3D G3DSA:3.40.1750.20 138 204 7.1E-73 T 11-10-2018 SYN_03198 b8a0869f560c4a38129d9dc0897f103d 309 Gene3D G3DSA:3.90.226.10 48 241 7.1E-73 T 11-10-2018 SYN_03198 b8a0869f560c4a38129d9dc0897f103d 309 PRINTS PR00127 Clp protease catalytic subunit P signature 73 93 1.7E-5 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SYN_03198 b8a0869f560c4a38129d9dc0897f103d 309 PRINTS PR00127 Clp protease catalytic subunit P signature 211 230 1.7E-5 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SYN_03198 b8a0869f560c4a38129d9dc0897f103d 309 PRINTS PR00127 Clp protease catalytic subunit P signature 106 123 1.7E-5 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SYN_03198 b8a0869f560c4a38129d9dc0897f103d 309 Pfam PF01343 Peptidase family S49 98 248 4.1E-47 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 SYN_03198 b8a0869f560c4a38129d9dc0897f103d 309 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 43 246 4.8E-73 T 11-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 SYN_03198 b8a0869f560c4a38129d9dc0897f103d 309 SUPERFAMILY SSF52096 39 235 3.13E-42 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily SYN_02226 60eb126ce96c8e3aa578663d22bf4c94 277 Pfam PF12849 PBP superfamily domain 33 262 4.9E-33 T 11-10-2018 IPR024370 PBP domain SYN_02226 60eb126ce96c8e3aa578663d22bf4c94 277 Gene3D G3DSA:3.40.190.10 40 275 9.9E-73 T 11-10-2018 SYN_02226 60eb126ce96c8e3aa578663d22bf4c94 277 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 3 275 9.1E-62 T 11-10-2018 IPR011862 Phosphate binding protein GO:0042301 SYN_02226 60eb126ce96c8e3aa578663d22bf4c94 277 SUPERFAMILY SSF53850 32 277 8.98E-67 T 11-10-2018 SYN_02226 60eb126ce96c8e3aa578663d22bf4c94 277 Gene3D G3DSA:3.40.190.10 111 233 9.9E-73 T 11-10-2018 SYN_01953 80743cd46db770fb0a96c521069b1297 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_01953 80743cd46db770fb0a96c521069b1297 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 2.7E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_01953 80743cd46db770fb0a96c521069b1297 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 2.7E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_01953 80743cd46db770fb0a96c521069b1297 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 2.7E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_01953 80743cd46db770fb0a96c521069b1297 210 SMART SM00448 2 115 5.6E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_01953 80743cd46db770fb0a96c521069b1297 210 SUPERFAMILY SSF52172 1 130 1.42E-38 T 11-10-2018 IPR011006 CheY-like superfamily SYN_01953 80743cd46db770fb0a96c521069b1297 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 9.5E-18 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_01953 80743cd46db770fb0a96c521069b1297 210 SMART SM00421 146 203 2.2E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_01953 80743cd46db770fb0a96c521069b1297 210 Pfam PF00072 Response regulator receiver domain 4 115 1.6E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_01953 80743cd46db770fb0a96c521069b1297 210 SUPERFAMILY SSF46894 138 209 2.18E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SYN_01953 80743cd46db770fb0a96c521069b1297 210 Gene3D G3DSA:3.40.50.12740 2 209 1.4E-67 T 11-10-2018 SYN_00545 a2fe7430735e393352308d0ed3386267 291 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 2.6E-90 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00545 a2fe7430735e393352308d0ed3386267 291 SUPERFAMILY SSF52943 2 288 1.96E-82 T 11-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00545 a2fe7430735e393352308d0ed3386267 291 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 4.2E-32 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00545 a2fe7430735e393352308d0ed3386267 291 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 4.2E-32 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00545 a2fe7430735e393352308d0ed3386267 291 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 4.2E-32 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00545 a2fe7430735e393352308d0ed3386267 291 PRINTS PR00126 ATP synthase gamma subunit signature 165 182 4.2E-32 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00545 a2fe7430735e393352308d0ed3386267 291 Gene3D G3DSA:1.10.287.80 6 284 1.6E-93 T 11-10-2018 SYN_00545 a2fe7430735e393352308d0ed3386267 291 Pfam PF00231 ATP synthase 4 288 6.6E-91 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00545 a2fe7430735e393352308d0ed3386267 291 Gene3D G3DSA:3.40.1380.10 61 207 1.6E-93 T 11-10-2018 SYN_00545 a2fe7430735e393352308d0ed3386267 291 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 32.716 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_01259 79189c587bff5bee77bd96945259c411 207 Gene3D G3DSA:3.40.50.150 13 184 5.6E-26 T 11-10-2018 SYN_01259 79189c587bff5bee77bd96945259c411 207 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 12 199 4.7E-67 T 11-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 SYN_01259 79189c587bff5bee77bd96945259c411 207 Pfam PF07021 Methionine biosynthesis protein MetW 12 199 3.2E-67 T 11-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 SYN_01259 79189c587bff5bee77bd96945259c411 207 SUPERFAMILY SSF53335 12 180 1.47E-28 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_01261 6230e18e97de57d24419c0e806017c4b 362 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 39 187 3.4E-57 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 SYN_01261 6230e18e97de57d24419c0e806017c4b 362 SUPERFAMILY SSF55068 30 199 3.14E-70 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 SYN_01261 6230e18e97de57d24419c0e806017c4b 362 Gene3D G3DSA:2.170.150.20 217 362 2.6E-60 T 11-10-2018 SYN_01261 6230e18e97de57d24419c0e806017c4b 362 Gene3D G3DSA:3.30.1060.10 17 193 3.2E-65 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 SYN_01261 6230e18e97de57d24419c0e806017c4b 362 Pfam PF01625 Peptide methionine sulfoxide reductase 40 188 2.0E-57 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 SYN_01261 6230e18e97de57d24419c0e806017c4b 362 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 200 346 37.329 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 SYN_01261 6230e18e97de57d24419c0e806017c4b 362 SUPERFAMILY SSF51316 222 361 1.62E-60 T 11-10-2018 IPR011057 Mss4-like superfamily SYN_01261 6230e18e97de57d24419c0e806017c4b 362 Pfam PF01641 SelR domain 227 345 2.8E-48 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 SYN_01261 6230e18e97de57d24419c0e806017c4b 362 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 37 194 35.415 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 SYN_01261 6230e18e97de57d24419c0e806017c4b 362 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 223 354 1.2E-62 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 SYN_01048 5572b149340b43fda4c71be5c212d544 674 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 159 6.8E-18 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain SYN_01048 5572b149340b43fda4c71be5c212d544 674 Pfam PF00593 TonB dependent receptor 217 673 2.0E-45 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel SYN_01048 5572b149340b43fda4c71be5c212d544 674 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 657 674 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site SYN_01048 5572b149340b43fda4c71be5c212d544 674 SUPERFAMILY SSF56935 47 674 3.66E-101 T 11-10-2018 SYN_01048 5572b149340b43fda4c71be5c212d544 674 Gene3D G3DSA:2.170.130.10 57 170 3.2E-21 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily SYN_01048 5572b149340b43fda4c71be5c212d544 674 Gene3D G3DSA:2.40.170.20 171 674 5.5E-72 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily SYN_01518 3acb9e20ef83df551352c65a383a2d0f 495 Gene3D G3DSA:1.10.3090.10 191 475 2.6E-52 T 11-10-2018 SYN_01518 3acb9e20ef83df551352c65a383a2d0f 495 Gene3D G3DSA:3.30.460.10 66 190 8.1E-35 T 11-10-2018 SYN_01518 3acb9e20ef83df551352c65a383a2d0f 495 SUPERFAMILY SSF81301 69 188 2.29E-32 T 11-10-2018 SYN_01518 3acb9e20ef83df551352c65a383a2d0f 495 SUPERFAMILY SSF81891 189 485 2.49E-54 T 11-10-2018 SYN_01518 3acb9e20ef83df551352c65a383a2d0f 495 Pfam PF01743 Poly A polymerase head domain 85 191 4.0E-21 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 SYN_01518 3acb9e20ef83df551352c65a383a2d0f 495 Pfam PF01966 HD domain 297 380 5.3E-6 T 11-10-2018 IPR006674 HD domain SYN_01518 3acb9e20ef83df551352c65a383a2d0f 495 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 219 279 1.0E-18 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 SYN_00083 160ec8b447daa7e73406a625d56ed65c 441 SUPERFAMILY SSF53187 37 435 1.26E-75 T 11-10-2018 SYN_00083 160ec8b447daa7e73406a625d56ed65c 441 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 52 412 7.7E-80 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 SYN_00083 160ec8b447daa7e73406a625d56ed65c 441 PIRSF PIRSF005962 35 437 3.4E-99 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 SYN_00083 160ec8b447daa7e73406a625d56ed65c 441 Gene3D G3DSA:3.30.70.360 224 342 4.2E-116 T 11-10-2018 SYN_00083 160ec8b447daa7e73406a625d56ed65c 441 Pfam PF07687 Peptidase dimerisation domain 225 323 8.1E-14 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain SYN_00083 160ec8b447daa7e73406a625d56ed65c 441 SUPERFAMILY SSF55031 225 327 8.64E-29 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain SYN_00083 160ec8b447daa7e73406a625d56ed65c 441 Pfam PF01546 Peptidase family M20/M25/M40 105 432 1.1E-25 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 SYN_00083 160ec8b447daa7e73406a625d56ed65c 441 Gene3D G3DSA:3.40.630.10 50 412 4.2E-116 T 11-10-2018 SYN_00209 7ef4c6a0f1e967850fafefa9c2deaae3 280 SUPERFAMILY SSF52540 1 227 2.73E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00209 7ef4c6a0f1e967850fafefa9c2deaae3 280 Pfam PF00005 ABC transporter 19 166 2.8E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_00209 7ef4c6a0f1e967850fafefa9c2deaae3 280 TIGRFAM TIGR04520 ECF_ATPase_1: energy-coupling factor transporter ATPase 2 268 5.0E-97 T 11-10-2018 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 SYN_00209 7ef4c6a0f1e967850fafefa9c2deaae3 280 SMART SM00382 28 213 4.1E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00209 7ef4c6a0f1e967850fafefa9c2deaae3 280 Gene3D G3DSA:3.40.50.300 1 273 2.6E-72 T 11-10-2018 SYN_00209 7ef4c6a0f1e967850fafefa9c2deaae3 280 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_02148 2abdf0f342058ae85cc33106d21b2b23 403 Gene3D G3DSA:3.40.980.10 177 329 6.9E-88 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily SYN_02148 2abdf0f342058ae85cc33106d21b2b23 403 Gene3D G3DSA:2.40.340.10 330 396 6.9E-88 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_02148 2abdf0f342058ae85cc33106d21b2b23 403 SUPERFAMILY SSF53218 179 323 4.58E-27 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily SYN_02148 2abdf0f342058ae85cc33106d21b2b23 403 SMART SM00852 182 319 3.3E-20 T 11-10-2018 IPR001453 MoaB/Mog domain SYN_02148 2abdf0f342058ae85cc33106d21b2b23 403 SUPERFAMILY SSF63882 7 177 6.15E-42 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_02148 2abdf0f342058ae85cc33106d21b2b23 403 Gene3D G3DSA:3.90.105.10 24 176 6.9E-88 T 11-10-2018 SYN_02148 2abdf0f342058ae85cc33106d21b2b23 403 Pfam PF03453 MoeA N-terminal region (domain I and II) 9 169 9.2E-33 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_02148 2abdf0f342058ae85cc33106d21b2b23 403 Gene3D G3DSA:2.170.190.11 48 143 6.9E-88 T 11-10-2018 SYN_02148 2abdf0f342058ae85cc33106d21b2b23 403 Pfam PF00994 Probable molybdopterin binding domain 182 314 4.1E-15 T 11-10-2018 IPR001453 MoaB/Mog domain SYN_02148 2abdf0f342058ae85cc33106d21b2b23 403 SUPERFAMILY SSF63867 329 402 9.16E-5 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_00767 cb9d77ed8823d160a1d7a179c68e4d4c 166 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 3 166 22.471 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 SYN_00767 cb9d77ed8823d160a1d7a179c68e4d4c 166 Gene3D G3DSA:2.30.30.240 92 166 2.0E-20 T 11-10-2018 SYN_00767 cb9d77ed8823d160a1d7a179c68e4d4c 166 SUPERFAMILY SSF50346 97 166 1.28E-18 T 11-10-2018 IPR011033 PRC-barrel-like superfamily SYN_00767 cb9d77ed8823d160a1d7a179c68e4d4c 166 Pfam PF01782 RimM N-terminal domain 5 88 5.9E-17 T 11-10-2018 IPR002676 RimM, N-terminal GO:0006364 SYN_00767 cb9d77ed8823d160a1d7a179c68e4d4c 166 SUPERFAMILY SSF50447 3 88 1.01E-13 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily SYN_00767 cb9d77ed8823d160a1d7a179c68e4d4c 166 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 4 165 1.3E-40 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 SYN_00767 cb9d77ed8823d160a1d7a179c68e4d4c 166 Gene3D G3DSA:2.40.30.60 3 89 2.4E-15 T 11-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 SYN_00767 cb9d77ed8823d160a1d7a179c68e4d4c 166 Pfam PF05239 PRC-barrel domain 95 161 5.5E-6 T 11-10-2018 IPR027275 PRC-barrel domain SYN_00221 c670f45e5a6653b611360a58ffc47435 406 SUPERFAMILY SSF53335 161 382 5.52E-38 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_00221 c670f45e5a6653b611360a58ffc47435 406 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 311 317 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SYN_00221 c670f45e5a6653b611360a58ffc47435 406 Gene3D G3DSA:3.40.50.150 180 377 8.1E-116 T 11-10-2018 SYN_00221 c670f45e5a6653b611360a58ffc47435 406 Pfam PF01170 Putative RNA methylase family UPF0020 173 379 3.8E-45 T 11-10-2018 IPR000241 Putative RNA methylase domain SYN_00221 c670f45e5a6653b611360a58ffc47435 406 Gene3D G3DSA:3.30.2130.30 17 263 8.1E-116 T 11-10-2018 SYN_02184 540f75651f083e27be728d5102ac8811 445 SUPERFAMILY SSF141523 129 267 5.62E-32 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like SYN_02184 540f75651f083e27be728d5102ac8811 445 Pfam PF03734 L,D-transpeptidase catalytic domain 131 267 8.5E-22 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 SYN_02184 540f75651f083e27be728d5102ac8811 445 Gene3D G3DSA:2.40.440.10 63 335 9.1E-87 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like SYN_02184 540f75651f083e27be728d5102ac8811 445 Pfam PF05036 Sporulation related domain 370 438 4.8E-10 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 SYN_02184 540f75651f083e27be728d5102ac8811 445 Gene3D G3DSA:3.30.70.1070 370 441 2.3E-5 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 SYN_02184 540f75651f083e27be728d5102ac8811 445 SUPERFAMILY SSF110997 370 439 2.22E-9 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 SYN_00157 7a28a5573a22fc49e93a10fee2a8fcae 181 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 10 176 6.9E-36 T 11-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SYN_00157 7a28a5573a22fc49e93a10fee2a8fcae 181 TIGRFAM TIGR02175 PorC_KorC: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family 1 179 8.1E-67 T 11-10-2018 IPR011894 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate GO:0016625|GO:0055114 SYN_00157 7a28a5573a22fc49e93a10fee2a8fcae 181 SUPERFAMILY SSF53323 1 179 1.01E-46 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 SYN_00157 7a28a5573a22fc49e93a10fee2a8fcae 181 Gene3D G3DSA:3.40.920.10 1 180 2.3E-65 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 SYN_02593 b00fa59fcd868ae633bc6de00ea7b9ef 586 Pfam PF13426 PAS domain 325 427 5.4E-7 T 11-10-2018 IPR000014 PAS domain SYN_02593 b00fa59fcd868ae633bc6de00ea7b9ef 586 Pfam PF13426 PAS domain 197 299 2.7E-10 T 11-10-2018 IPR000014 PAS domain SYN_02593 b00fa59fcd868ae633bc6de00ea7b9ef 586 Pfam PF00989 PAS fold 60 170 6.1E-14 T 11-10-2018 IPR013767 PAS fold GO:0006355 SYN_02593 b00fa59fcd868ae633bc6de00ea7b9ef 586 SUPERFAMILY SSF55785 64 177 1.38E-26 T 11-10-2018 IPR035965 PAS domain superfamily SYN_02593 b00fa59fcd868ae633bc6de00ea7b9ef 586 Gene3D G3DSA:3.30.450.20 315 443 3.0E-23 T 11-10-2018 SYN_02593 b00fa59fcd868ae633bc6de00ea7b9ef 586 Gene3D G3DSA:3.30.450.20 57 186 6.0E-28 T 11-10-2018 SYN_02593 b00fa59fcd868ae633bc6de00ea7b9ef 586 SUPERFAMILY SSF46894 516 574 1.43E-12 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SYN_02593 b00fa59fcd868ae633bc6de00ea7b9ef 586 Gene3D G3DSA:1.10.10.10 517 584 2.1E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_02593 b00fa59fcd868ae633bc6de00ea7b9ef 586 Pfam PF00196 Bacterial regulatory proteins, luxR family 526 574 7.6E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_02593 b00fa59fcd868ae633bc6de00ea7b9ef 586 SUPERFAMILY SSF55785 170 289 4.34E-23 T 11-10-2018 IPR035965 PAS domain superfamily SYN_02593 b00fa59fcd868ae633bc6de00ea7b9ef 586 SMART SM00086 386 428 1.8 T 11-10-2018 IPR001610 PAC motif SYN_02593 b00fa59fcd868ae633bc6de00ea7b9ef 586 SMART SM00086 132 174 1.0E-5 T 11-10-2018 IPR001610 PAC motif SYN_02593 b00fa59fcd868ae633bc6de00ea7b9ef 586 SMART SM00086 259 301 1.6E-4 T 11-10-2018 IPR001610 PAC motif SYN_02593 b00fa59fcd868ae633bc6de00ea7b9ef 586 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 310 435 6.4E-21 T 11-10-2018 IPR000014 PAS domain SYN_02593 b00fa59fcd868ae633bc6de00ea7b9ef 586 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 58 181 3.2E-29 T 11-10-2018 IPR000014 PAS domain SYN_02593 b00fa59fcd868ae633bc6de00ea7b9ef 586 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 189 308 1.1E-15 T 11-10-2018 IPR000014 PAS domain SYN_02593 b00fa59fcd868ae633bc6de00ea7b9ef 586 SMART SM00091 59 125 2.6E-12 T 11-10-2018 IPR000014 PAS domain SYN_02593 b00fa59fcd868ae633bc6de00ea7b9ef 586 SMART SM00091 313 384 6.8E-6 T 11-10-2018 IPR000014 PAS domain SYN_02593 b00fa59fcd868ae633bc6de00ea7b9ef 586 SMART SM00091 186 253 2.2E-5 T 11-10-2018 IPR000014 PAS domain SYN_02593 b00fa59fcd868ae633bc6de00ea7b9ef 586 Gene3D G3DSA:3.30.450.20 187 314 6.4E-22 T 11-10-2018 SYN_02593 b00fa59fcd868ae633bc6de00ea7b9ef 586 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 527 541 7.0E-6 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_02593 b00fa59fcd868ae633bc6de00ea7b9ef 586 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 557 569 7.0E-6 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_02593 b00fa59fcd868ae633bc6de00ea7b9ef 586 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 541 557 7.0E-6 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_02593 b00fa59fcd868ae633bc6de00ea7b9ef 586 SMART SM00421 524 581 3.1E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_02593 b00fa59fcd868ae633bc6de00ea7b9ef 586 SUPERFAMILY SSF55785 299 426 2.44E-21 T 11-10-2018 IPR035965 PAS domain superfamily SYN_02707 6ab7c80071b74b2f017c1c47e16251ca 312 SUPERFAMILY SSF50486 207 311 2.51E-29 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 SYN_02707 6ab7c80071b74b2f017c1c47e16251ca 312 Pfam PF00551 Formyl transferase 3 183 3.9E-45 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SYN_02707 6ab7c80071b74b2f017c1c47e16251ca 312 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 4 306 36.453 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 SYN_02707 6ab7c80071b74b2f017c1c47e16251ca 312 Gene3D G3DSA:3.10.25.10 209 312 1.4E-30 T 11-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SYN_02707 6ab7c80071b74b2f017c1c47e16251ca 312 Pfam PF02911 Formyl transferase, C-terminal domain 207 303 4.8E-26 T 11-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SYN_02707 6ab7c80071b74b2f017c1c47e16251ca 312 Gene3D G3DSA:3.40.50.170 1 208 4.5E-82 T 11-10-2018 SYN_02707 6ab7c80071b74b2f017c1c47e16251ca 312 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 304 3.4E-94 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 SYN_02707 6ab7c80071b74b2f017c1c47e16251ca 312 SUPERFAMILY SSF53328 4 209 4.06E-71 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SYN_02707 6ab7c80071b74b2f017c1c47e16251ca 312 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 135 158 - T 11-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SYN_02888 057513473b629ca37feecd6cbc9f4c2f 311 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 10 294 5.7E-89 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 SYN_02888 057513473b629ca37feecd6cbc9f4c2f 311 SUPERFAMILY SSF52540 10 165 4.57E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02888 057513473b629ca37feecd6cbc9f4c2f 311 Gene3D G3DSA:3.40.50.300 14 292 4.9E-101 T 11-10-2018 SYN_02888 057513473b629ca37feecd6cbc9f4c2f 311 Pfam PF01715 IPP transferase 43 289 1.2E-78 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 SYN_02888 057513473b629ca37feecd6cbc9f4c2f 311 Gene3D G3DSA:1.10.20.140 117 188 4.9E-101 T 11-10-2018 SYN_02888 057513473b629ca37feecd6cbc9f4c2f 311 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 10 302 29.914 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 SYN_02888 057513473b629ca37feecd6cbc9f4c2f 311 SUPERFAMILY SSF52540 7 271 1.67E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00891 a1d85130e1974ae1fa56ddab7c535a65 409 Pfam PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 37 202 6.5E-60 T 11-10-2018 IPR004456 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GO:0003824|GO:0046537 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SYN_00891 a1d85130e1974ae1fa56ddab7c535a65 409 Pfam PF01676 Metalloenzyme superfamily 1 376 8.8E-38 T 11-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 SYN_00891 a1d85130e1974ae1fa56ddab7c535a65 409 Gene3D G3DSA:3.40.720.10 4 394 1.1E-130 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 SYN_00891 a1d85130e1974ae1fa56ddab7c535a65 409 PIRSF PIRSF006392 1 402 1.4E-132 T 11-10-2018 IPR004456 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GO:0003824|GO:0046537 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SYN_00891 a1d85130e1974ae1fa56ddab7c535a65 409 SUPERFAMILY SSF53649 1 362 6.33E-34 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 SYN_00891 a1d85130e1974ae1fa56ddab7c535a65 409 TIGRFAM TIGR02535 hyp_Hser_kinase: proposed homoserine kinase 1 398 3.6E-166 T 11-10-2018 IPR023665 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, prokaryotes GO:0046537 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SYN_00891 a1d85130e1974ae1fa56ddab7c535a65 409 TIGRFAM TIGR00306 apgM: phosphoglycerate mutase (2,3-diphosphoglycerate-independent), archaeal form 4 398 1.3E-121 T 11-10-2018 IPR004456 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GO:0003824|GO:0046537 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SYN_00891 a1d85130e1974ae1fa56ddab7c535a65 409 Gene3D G3DSA:3.30.70.2130 78 224 1.1E-130 T 11-10-2018 SYN_00978 dabc5c68c46655cf8855d181c9c641c4 223 SUPERFAMILY SSF58104 112 210 2.75E-11 T 11-10-2018 SYN_00978 dabc5c68c46655cf8855d181c9c641c4 223 SUPERFAMILY SSF51735 2 95 1.58E-14 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_00978 dabc5c68c46655cf8855d181c9c641c4 223 Gene3D G3DSA:1.10.287.950 55 221 7.1E-9 T 11-10-2018 SYN_02959 3edf50094f88de37fc274842d27ba99b 449 Gene3D G3DSA:3.40.120.10 1 146 8.5E-48 T 11-10-2018 SYN_02959 3edf50094f88de37fc274842d27ba99b 449 Gene3D G3DSA:3.30.310.50 373 449 1.1E-23 T 11-10-2018 SYN_02959 3edf50094f88de37fc274842d27ba99b 449 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 446 1.3E-182 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_02959 3edf50094f88de37fc274842d27ba99b 449 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 444 4.5E-12 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_02959 3edf50094f88de37fc274842d27ba99b 449 SUPERFAMILY SSF53738 158 258 1.65E-29 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_02959 3edf50094f88de37fc274842d27ba99b 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 5.6E-12 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_02959 3edf50094f88de37fc274842d27ba99b 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 176 195 5.6E-12 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_02959 3edf50094f88de37fc274842d27ba99b 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 5.6E-12 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_02959 3edf50094f88de37fc274842d27ba99b 449 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 447 45.388 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_02959 3edf50094f88de37fc274842d27ba99b 449 SUPERFAMILY SSF55957 360 449 6.63E-20 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_02959 3edf50094f88de37fc274842d27ba99b 449 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 95 104 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_02959 3edf50094f88de37fc274842d27ba99b 449 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 368 4.8E-34 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_02959 3edf50094f88de37fc274842d27ba99b 449 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 136 5.4E-43 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_02959 3edf50094f88de37fc274842d27ba99b 449 SUPERFAMILY SSF53738 3 183 2.98E-47 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_02959 3edf50094f88de37fc274842d27ba99b 449 Gene3D G3DSA:3.40.120.10 177 365 5.5E-71 T 11-10-2018 SYN_02959 3edf50094f88de37fc274842d27ba99b 449 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 159 256 5.6E-19 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_02959 3edf50094f88de37fc274842d27ba99b 449 SUPERFAMILY SSF53738 261 366 5.49E-31 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SYN_02959 3edf50094f88de37fc274842d27ba99b 449 Gene3D G3DSA:3.40.120.10 259 342 5.5E-71 T 11-10-2018 SYN_01625 49f799068784628fe6c768bbc8f634c0 1069 SUPERFAMILY SSF52440 554 671 3.74E-49 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily SYN_01625 49f799068784628fe6c768bbc8f634c0 1069 Pfam PF02142 MGS-like domain 952 1035 2.3E-19 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain SYN_01625 49f799068784628fe6c768bbc8f634c0 1069 SUPERFAMILY SSF56059 669 929 1.43E-101 T 11-10-2018 SYN_01625 49f799068784628fe6c768bbc8f634c0 1069 Gene3D G3DSA:3.30.470.20 121 402 1.7E-124 T 11-10-2018 SYN_01625 49f799068784628fe6c768bbc8f634c0 1069 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 426 543 1.0E-40 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_01625 49f799068784628fe6c768bbc8f634c0 1069 SMART SM01096 423 543 6.3E-70 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_01625 49f799068784628fe6c768bbc8f634c0 1069 Gene3D G3DSA:3.40.50.20 551 658 4.5E-48 T 11-10-2018 SYN_01625 49f799068784628fe6c768bbc8f634c0 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.5E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_01625 49f799068784628fe6c768bbc8f634c0 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 379 397 1.5E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_01625 49f799068784628fe6c768bbc8f634c0 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.5E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_01625 49f799068784628fe6c768bbc8f634c0 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.5E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_01625 49f799068784628fe6c768bbc8f634c0 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.5E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_01625 49f799068784628fe6c768bbc8f634c0 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.5E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_01625 49f799068784628fe6c768bbc8f634c0 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.5E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_01625 49f799068784628fe6c768bbc8f634c0 1069 Gene3D G3DSA:3.40.50.1380 932 1069 2.2E-40 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily SYN_01625 49f799068784628fe6c768bbc8f634c0 1069 Gene3D G3DSA:3.40.50.20 1 116 4.7E-48 T 11-10-2018 SYN_01625 49f799068784628fe6c768bbc8f634c0 1069 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 9.7E-72 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SYN_01625 49f799068784628fe6c768bbc8f634c0 1069 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 669 871 5.2E-35 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SYN_01625 49f799068784628fe6c768bbc8f634c0 1069 SUPERFAMILY SSF52440 1 127 2.59E-46 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily SYN_01625 49f799068784628fe6c768bbc8f634c0 1069 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SYN_01625 49f799068784628fe6c768bbc8f634c0 1069 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1058 12.958 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_01625 49f799068784628fe6c768bbc8f634c0 1069 Gene3D G3DSA:1.10.1030.10 403 549 4.0E-46 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_01625 49f799068784628fe6c768bbc8f634c0 1069 SMART SM00851 951 1037 1.1E-28 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain SYN_01625 49f799068784628fe6c768bbc8f634c0 1069 SUPERFAMILY SSF56059 128 400 4.6E-107 T 11-10-2018 SYN_01625 49f799068784628fe6c768bbc8f634c0 1069 Gene3D G3DSA:3.30.470.20 661 930 1.6E-114 T 11-10-2018 SYN_01625 49f799068784628fe6c768bbc8f634c0 1069 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 834 841 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SYN_01625 49f799068784628fe6c768bbc8f634c0 1069 SUPERFAMILY SSF48108 395 550 1.7E-51 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_01625 49f799068784628fe6c768bbc8f634c0 1069 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SYN_01625 49f799068784628fe6c768bbc8f634c0 1069 SUPERFAMILY SSF52335 931 1067 2.09E-40 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily SYN_01625 49f799068784628fe6c768bbc8f634c0 1069 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1048 0.0 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_01625 49f799068784628fe6c768bbc8f634c0 1069 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1065 13.835 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_03250 39a7a8b5347f9920720bb0627d263099 548 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 467 477 - T 11-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site SYN_03250 39a7a8b5347f9920720bb0627d263099 548 Gene3D G3DSA:3.40.50.10260 22 241 1.1E-66 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 SYN_03250 39a7a8b5347f9920720bb0627d263099 548 SUPERFAMILY SSF64153 25 268 7.85E-61 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 SYN_03250 39a7a8b5347f9920720bb0627d263099 548 Pfam PF03853 YjeF-related protein N-terminus 49 215 4.9E-48 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SYN_03250 39a7a8b5347f9920720bb0627d263099 548 PIRSF PIRSF017184 25 532 7.5E-131 T 11-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 SYN_03250 39a7a8b5347f9920720bb0627d263099 548 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 247 532 20.995 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 SYN_03250 39a7a8b5347f9920720bb0627d263099 548 Pfam PF01256 Carbohydrate kinase 271 524 1.7E-50 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 SYN_03250 39a7a8b5347f9920720bb0627d263099 548 SUPERFAMILY SSF53613 254 527 4.26E-67 T 11-10-2018 IPR029056 Ribokinase-like SYN_03250 39a7a8b5347f9920720bb0627d263099 548 Gene3D G3DSA:3.40.1190.20 252 529 1.3E-78 T 11-10-2018 IPR029056 Ribokinase-like SYN_03250 39a7a8b5347f9920720bb0627d263099 548 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 255 526 5.6E-60 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 SYN_03250 39a7a8b5347f9920720bb0627d263099 548 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 29 236 25.395 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SYN_03250 39a7a8b5347f9920720bb0627d263099 548 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 29 236 5.9E-44 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SYN_01229 dba9c3fbce0066074b871ee949389f0e 151 Gene3D G3DSA:3.40.50.360 3 148 7.9E-36 T 11-10-2018 IPR029039 Flavoprotein-like superfamily SYN_01229 dba9c3fbce0066074b871ee949389f0e 151 SUPERFAMILY SSF52218 1 143 9.7E-39 T 11-10-2018 IPR029039 Flavoprotein-like superfamily SYN_01229 dba9c3fbce0066074b871ee949389f0e 151 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 SYN_01229 dba9c3fbce0066074b871ee949389f0e 151 Pfam PF03358 NADPH-dependent FMN reductase 36 106 8.3E-8 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 SYN_01017 8c531c770503980f380c417e888d81ba 248 Gene3D G3DSA:3.40.800.20 162 247 9.9E-11 T 11-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 SYN_01017 8c531c770503980f380c417e888d81ba 248 PRINTS PR01270 Histone deacetylase superfamily signature 94 117 3.4E-11 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 SYN_01017 8c531c770503980f380c417e888d81ba 248 PRINTS PR01270 Histone deacetylase superfamily signature 178 188 3.4E-11 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 SYN_01017 8c531c770503980f380c417e888d81ba 248 PRINTS PR01270 Histone deacetylase superfamily signature 128 143 3.4E-11 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 SYN_01017 8c531c770503980f380c417e888d81ba 248 Gene3D G3DSA:3.40.800.20 1 161 4.2E-33 T 11-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 SYN_01017 8c531c770503980f380c417e888d81ba 248 SUPERFAMILY SSF52768 1 247 1.68E-52 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily SYN_01017 8c531c770503980f380c417e888d81ba 248 Pfam PF00850 Histone deacetylase domain 179 244 2.7E-7 T 11-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 SYN_01017 8c531c770503980f380c417e888d81ba 248 Pfam PF00850 Histone deacetylase domain 64 154 1.5E-24 T 11-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 SYN_00439 aeddbc74d2e8774034803d2633e49b6f 371 SUPERFAMILY SSF102114 36 362 2.06E-47 T 11-10-2018 SYN_00439 aeddbc74d2e8774034803d2633e49b6f 371 SMART SM00876 256 362 6.9E-30 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 SYN_00439 aeddbc74d2e8774034803d2633e49b6f 371 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 361 3.1E-25 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 SYN_00439 aeddbc74d2e8774034803d2633e49b6f 371 Pfam PF04055 Radical SAM superfamily 80 219 9.0E-10 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_00439 aeddbc74d2e8774034803d2633e49b6f 371 Gene3D G3DSA:3.20.20.70 13 367 7.2E-106 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_00439 aeddbc74d2e8774034803d2633e49b6f 371 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 368 2.1E-135 T 11-10-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 SYN_01083 ecd01d3950e91c37aa002167fe50aa9f 326 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 123 302 6.2E-53 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SYN_01083 ecd01d3950e91c37aa002167fe50aa9f 326 SUPERFAMILY SSF51735 115 303 8.23E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_01083 ecd01d3950e91c37aa002167fe50aa9f 326 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 55 320 4.5E-19 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 SYN_01083 ecd01d3950e91c37aa002167fe50aa9f 326 Gene3D G3DSA:3.40.50.720 47 322 3.7E-91 T 11-10-2018 SYN_01083 ecd01d3950e91c37aa002167fe50aa9f 326 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 242 258 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SYN_01083 ecd01d3950e91c37aa002167fe50aa9f 326 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 213 235 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SYN_01083 ecd01d3950e91c37aa002167fe50aa9f 326 Gene3D G3DSA:3.40.50.720 113 301 3.7E-91 T 11-10-2018 SYN_01083 ecd01d3950e91c37aa002167fe50aa9f 326 SUPERFAMILY SSF52283 18 150 1.55E-25 T 11-10-2018 SYN_02557 911b08866aa213937f79775b09e0680d 472 SUPERFAMILY SSF48163 301 462 7.46E-44 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 SYN_02557 911b08866aa213937f79775b09e0680d 472 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 6 307 1.3E-102 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 SYN_02557 911b08866aa213937f79775b09e0680d 472 PRINTS PR00987 Glutamyl-tRNA synthetase signature 10 22 2.0E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 SYN_02557 911b08866aa213937f79775b09e0680d 472 PRINTS PR00987 Glutamyl-tRNA synthetase signature 181 191 2.0E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 SYN_02557 911b08866aa213937f79775b09e0680d 472 PRINTS PR00987 Glutamyl-tRNA synthetase signature 197 205 2.0E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 SYN_02557 911b08866aa213937f79775b09e0680d 472 PRINTS PR00987 Glutamyl-tRNA synthetase signature 24 35 2.0E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 SYN_02557 911b08866aa213937f79775b09e0680d 472 PRINTS PR00987 Glutamyl-tRNA synthetase signature 39 52 2.0E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 SYN_02557 911b08866aa213937f79775b09e0680d 472 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 6 463 33.299 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 SYN_02557 911b08866aa213937f79775b09e0680d 472 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 6 461 3.2E-174 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 SYN_02557 911b08866aa213937f79775b09e0680d 472 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 13 24 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_02557 911b08866aa213937f79775b09e0680d 472 Gene3D G3DSA:3.40.50.620 1 316 7.5E-135 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_02557 911b08866aa213937f79775b09e0680d 472 Gene3D G3DSA:1.10.10.350 368 470 1.7E-25 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 SYN_02557 911b08866aa213937f79775b09e0680d 472 SUPERFAMILY SSF52374 7 300 9.92E-112 T 11-10-2018 SYN_02854 54abfaf85faf69cecd4de8f3332bc544 901 Pfam PF08323 Starch synthase catalytic domain 429 624 9.1E-15 T 11-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 SYN_02854 54abfaf85faf69cecd4de8f3332bc544 901 Gene3D G3DSA:3.40.50.2000 655 876 6.1E-44 T 11-10-2018 SYN_02854 54abfaf85faf69cecd4de8f3332bc544 901 Gene3D G3DSA:3.40.50.2000 429 891 6.1E-44 T 11-10-2018 SYN_02854 54abfaf85faf69cecd4de8f3332bc544 901 SUPERFAMILY SSF88713 4 350 7.42E-49 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SYN_02854 54abfaf85faf69cecd4de8f3332bc544 901 Gene3D G3DSA:3.20.110.20 2 324 1.5E-24 T 11-10-2018 SYN_02854 54abfaf85faf69cecd4de8f3332bc544 901 SUPERFAMILY SSF53756 428 894 1.95E-33 T 11-10-2018 SYN_02854 54abfaf85faf69cecd4de8f3332bc544 901 Pfam PF03065 Glycosyl hydrolase family 57 5 319 1.6E-42 T 11-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 SYN_01686 b0602e7999a183d80374665285e4b2c5 224 Gene3D G3DSA:3.40.50.880 8 200 3.2E-53 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like SYN_01686 b0602e7999a183d80374665285e4b2c5 224 SUPERFAMILY SSF52317 11 193 4.28E-40 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like SYN_01686 b0602e7999a183d80374665285e4b2c5 224 Hamap MF_01615 Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 12 194 31.012 T 11-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 SYN_01686 b0602e7999a183d80374665285e4b2c5 224 Pfam PF01174 SNO glutamine amidotransferase family 14 195 7.1E-46 T 11-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 SYN_01686 b0602e7999a183d80374665285e4b2c5 224 PIRSF PIRSF005639 6 197 7.7E-55 T 11-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 SYN_01686 b0602e7999a183d80374665285e4b2c5 224 TIGRFAM TIGR03800 PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 12 192 4.4E-52 T 11-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 SYN_02003 38939a862572156f3dd7666ae4c21020 216 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 214 31.705 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 SYN_02003 38939a862572156f3dd7666ae4c21020 216 Gene3D G3DSA:3.40.50.620 2 216 2.0E-61 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_02003 38939a862572156f3dd7666ae4c21020 216 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 5 213 1.3E-54 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 SYN_02003 38939a862572156f3dd7666ae4c21020 216 Pfam PF01467 Cytidylyltransferase-like 5 188 1.2E-28 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SYN_02003 38939a862572156f3dd7666ae4c21020 216 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 66 1.1E-10 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SYN_02003 38939a862572156f3dd7666ae4c21020 216 SUPERFAMILY SSF52374 2 215 5.63E-52 T 11-10-2018 SYN_02649 f15165c42bf730564105c1f837058e13 262 TIGRFAM TIGR02623 G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase 6 262 2.5E-102 T 11-10-2018 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940 SYN_02649 f15165c42bf730564105c1f837058e13 262 Gene3D G3DSA:3.90.550.10 5 262 6.9E-62 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_02649 f15165c42bf730564105c1f837058e13 262 SUPERFAMILY SSF53448 3 262 5.2E-57 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_02649 f15165c42bf730564105c1f837058e13 262 Pfam PF00483 Nucleotidyl transferase 7 213 9.8E-17 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 SYN_00324 28d3366590d2ab8254fe547055d9faca 316 Gene3D G3DSA:1.20.1260.10 31 169 1.0E-21 T 11-10-2018 IPR012347 Ferritin-like SYN_00324 28d3366590d2ab8254fe547055d9faca 316 SUPERFAMILY SSF47240 30 168 1.79E-25 T 11-10-2018 IPR009078 Ferritin-like superfamily SYN_00324 28d3366590d2ab8254fe547055d9faca 316 Pfam PF00210 Ferritin-like domain 40 168 1.6E-5 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 SYN_03059 2ad3e8efbe22b64e053f5b82b9b6ce5b 59 PRINTS PR00354 7Fe ferredoxin signature 33 50 8.4E-5 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 SYN_03059 2ad3e8efbe22b64e053f5b82b9b6ce5b 59 PRINTS PR00354 7Fe ferredoxin signature 17 27 8.4E-5 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 SYN_03059 2ad3e8efbe22b64e053f5b82b9b6ce5b 59 Pfam PF13187 4Fe-4S dicluster domain 8 53 2.6E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_03059 2ad3e8efbe22b64e053f5b82b9b6ce5b 59 SUPERFAMILY SSF54862 1 58 3.09E-20 T 11-10-2018 SYN_03059 2ad3e8efbe22b64e053f5b82b9b6ce5b 59 Gene3D G3DSA:3.30.70.20 2 55 2.2E-20 T 11-10-2018 SYN_03059 2ad3e8efbe22b64e053f5b82b9b6ce5b 59 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 38 49 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_02416 77fe92d0979ec02d0bb3658d63caaedf 223 Pfam PF00440 Bacterial regulatory proteins, tetR family 37 83 2.1E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SYN_02416 77fe92d0979ec02d0bb3658d63caaedf 223 SUPERFAMILY SSF46689 26 104 2.49E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SYN_02416 77fe92d0979ec02d0bb3658d63caaedf 223 ProSitePatterns PS01081 TetR-type HTH domain signature. 49 80 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site SYN_02416 77fe92d0979ec02d0bb3658d63caaedf 223 Gene3D G3DSA:1.10.357.10 79 217 1.9E-23 T 11-10-2018 SYN_02416 77fe92d0979ec02d0bb3658d63caaedf 223 Pfam PF08359 YsiA-like protein, C-terminal region 90 214 2.2E-13 T 11-10-2018 IPR013570 Transcription regulator YsiA, C-terminal SYN_02416 77fe92d0979ec02d0bb3658d63caaedf 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 58 81 6.4E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SYN_02416 77fe92d0979ec02d0bb3658d63caaedf 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 50 6.4E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SYN_02416 77fe92d0979ec02d0bb3658d63caaedf 223 SUPERFAMILY SSF48498 106 214 3.56E-18 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily SYN_02416 77fe92d0979ec02d0bb3658d63caaedf 223 Gene3D G3DSA:1.10.10.60 5 78 1.1E-16 T 11-10-2018 SYN_00741 02aba19ecff909de9d37bbe3f489eeb9 651 Gene3D G3DSA:3.10.620.30 338 485 6.3E-19 T 11-10-2018 SYN_00741 02aba19ecff909de9d37bbe3f489eeb9 651 SMART SM00460 403 474 1.1E-25 T 11-10-2018 IPR002931 Transglutaminase-like SYN_00741 02aba19ecff909de9d37bbe3f489eeb9 651 Pfam PF11992 Domain of unknown function (DUF3488) 20 331 8.2E-64 T 11-10-2018 IPR021878 Protein of unknown function DUF3488 SYN_00741 02aba19ecff909de9d37bbe3f489eeb9 651 SUPERFAMILY SSF54001 280 594 1.3E-48 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily SYN_00741 02aba19ecff909de9d37bbe3f489eeb9 651 Pfam PF01841 Transglutaminase-like superfamily 366 472 2.4E-23 T 11-10-2018 IPR002931 Transglutaminase-like SYN_00171 479922b0afd3cce90d8a54a056f07415 283 Pfam PF08668 HDOD domain 24 213 9.3E-53 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD SYN_00171 479922b0afd3cce90d8a54a056f07415 283 SMART SM00471 108 244 3.4E-8 T 11-10-2018 IPR003607 HD/PDEase domain SYN_00171 479922b0afd3cce90d8a54a056f07415 283 Gene3D G3DSA:1.10.3210.10 5 282 5.3E-72 T 11-10-2018 SYN_00171 479922b0afd3cce90d8a54a056f07415 283 TIGRFAM TIGR00277 HDIG: HDIG domain 111 212 5.5E-8 T 11-10-2018 IPR006675 HDIG domain SYN_00171 479922b0afd3cce90d8a54a056f07415 283 SUPERFAMILY SSF109604 14 272 1.06E-63 T 11-10-2018 SYN_02037 e50388257d7c455860b63f3ccbc4b312 217 Pfam PF04542 Sigma-70 region 2 38 105 4.7E-16 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 SYN_02037 e50388257d7c455860b63f3ccbc4b312 217 SUPERFAMILY SSF88946 18 112 4.87E-26 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 SYN_02037 e50388257d7c455860b63f3ccbc4b312 217 Pfam PF08281 Sigma-70, region 4 155 205 1.9E-14 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SYN_02037 e50388257d7c455860b63f3ccbc4b312 217 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 33 208 2.2E-28 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 SYN_02037 e50388257d7c455860b63f3ccbc4b312 217 SUPERFAMILY SSF88659 145 209 1.35E-14 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like SYN_02037 e50388257d7c455860b63f3ccbc4b312 217 Gene3D G3DSA:1.10.10.10 149 210 9.3E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_02037 e50388257d7c455860b63f3ccbc4b312 217 Gene3D G3DSA:1.10.1740.10 14 116 3.7E-29 T 11-10-2018 SYN_00744 a3ea9ea17417394bfd1fa36e852efeed 168 Gene3D G3DSA:3.40.50.300 5 152 2.2E-32 T 11-10-2018 SYN_00744 a3ea9ea17417394bfd1fa36e852efeed 168 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 40 160 2.9E-44 T 11-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 SYN_00744 a3ea9ea17417394bfd1fa36e852efeed 168 SUPERFAMILY SSF52540 9 143 2.91E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00072 7645f4d7dfcbe8cb15f8eea2e7283bb7 49 SUPERFAMILY SSF57829 1 49 2.08E-17 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 SYN_00072 7645f4d7dfcbe8cb15f8eea2e7283bb7 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 11-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_00072 7645f4d7dfcbe8cb15f8eea2e7283bb7 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 2 49 4.8E-19 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00072 7645f4d7dfcbe8cb15f8eea2e7283bb7 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 17.948 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00072 7645f4d7dfcbe8cb15f8eea2e7283bb7 49 Pfam PF00471 Ribosomal protein L33 4 49 8.4E-21 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00072 7645f4d7dfcbe8cb15f8eea2e7283bb7 49 Gene3D G3DSA:2.20.28.120 1 49 7.3E-21 T 11-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00663 72c4cbac3ef7cf20ade1fef06f12049e 195 PIRSF PIRSF016138 8 195 9.9E-68 T 11-10-2018 IPR015074 Protein of unknown function DUF1867 SYN_00663 72c4cbac3ef7cf20ade1fef06f12049e 195 Gene3D G3DSA:3.40.1380.20 9 194 2.5E-68 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SYN_00663 72c4cbac3ef7cf20ade1fef06f12049e 195 ProDom PD022619 AF0103 MM1100 MJ0504 UNCHARACTERIZED SIMILAR MA4416 16 192 2.0E-40 T 11-10-2018 IPR015074 Protein of unknown function DUF1867 SYN_00663 72c4cbac3ef7cf20ade1fef06f12049e 195 Pfam PF02887 Pyruvate kinase, alpha/beta domain 23 172 1.7E-14 T 11-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SYN_00663 72c4cbac3ef7cf20ade1fef06f12049e 195 SUPERFAMILY SSF52935 10 193 2.66E-65 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 SYN_00437 ed2047243e55a66523f5e5fa3f2dca00 384 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 326 5.1E-130 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 SYN_00437 ed2047243e55a66523f5e5fa3f2dca00 384 Gene3D G3DSA:3.40.50.1440 5 221 1.5E-79 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 SYN_00437 ed2047243e55a66523f5e5fa3f2dca00 384 ProSitePatterns PS01134 FtsZ protein signature 1. 45 79 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 SYN_00437 ed2047243e55a66523f5e5fa3f2dca00 384 SMART SM00865 208 326 1.0E-64 T 11-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 SYN_00437 ed2047243e55a66523f5e5fa3f2dca00 384 SMART SM00864 14 206 2.6E-113 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 SYN_00437 ed2047243e55a66523f5e5fa3f2dca00 384 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 172 2.6E-38 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 SYN_00437 ed2047243e55a66523f5e5fa3f2dca00 384 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 10 353 38.749 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 SYN_00437 ed2047243e55a66523f5e5fa3f2dca00 384 SUPERFAMILY SSF52490 13 209 1.7E-69 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 SYN_00437 ed2047243e55a66523f5e5fa3f2dca00 384 PRINTS PR00423 Cell division protein FtsZ signature 213 234 7.3E-51 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 SYN_00437 ed2047243e55a66523f5e5fa3f2dca00 384 PRINTS PR00423 Cell division protein FtsZ signature 190 212 7.3E-51 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 SYN_00437 ed2047243e55a66523f5e5fa3f2dca00 384 PRINTS PR00423 Cell division protein FtsZ signature 127 148 7.3E-51 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 SYN_00437 ed2047243e55a66523f5e5fa3f2dca00 384 PRINTS PR00423 Cell division protein FtsZ signature 99 119 7.3E-51 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 SYN_00437 ed2047243e55a66523f5e5fa3f2dca00 384 ProSitePatterns PS01135 FtsZ protein signature 2. 98 119 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 SYN_00437 ed2047243e55a66523f5e5fa3f2dca00 384 Pfam PF12327 FtsZ family, C-terminal domain 223 318 2.6E-37 T 11-10-2018 IPR024757 Cell division protein FtsZ, C-terminal SYN_00437 ed2047243e55a66523f5e5fa3f2dca00 384 SUPERFAMILY SSF55307 205 319 1.63E-46 T 11-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 SYN_00437 ed2047243e55a66523f5e5fa3f2dca00 384 Gene3D G3DSA:3.30.1330.20 222 331 1.3E-43 T 11-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 SYN_02096 78708cf833dd8f4c91ef25c63e30d9dd 260 SUPERFAMILY SSF50615 15 87 1.78E-18 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SYN_02096 78708cf833dd8f4c91ef25c63e30d9dd 260 Gene3D G3DSA:2.40.10.170 15 88 1.8E-18 T 11-10-2018 SYN_02096 78708cf833dd8f4c91ef25c63e30d9dd 260 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 21 86 1.9E-11 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SYN_02096 78708cf833dd8f4c91ef25c63e30d9dd 260 Gene3D G3DSA:3.40.50.300 89 259 7.5E-57 T 11-10-2018 SYN_02096 78708cf833dd8f4c91ef25c63e30d9dd 260 SUPERFAMILY SSF52540 89 255 3.16E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02096 78708cf833dd8f4c91ef25c63e30d9dd 260 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 143 255 1.8E-27 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 SYN_02527 a54065334cbaad7ae78a04585f9524e0 321 Pfam PF01040 UbiA prenyltransferase family 40 285 1.0E-32 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 SYN_02527 a54065334cbaad7ae78a04585f9524e0 321 PIRSF PIRSF005355 18 321 7.3E-43 T 11-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 SYN_01205 5c3e8f204dc868a49ba5b18dfb6abe40 238 Gene3D G3DSA:3.10.560.10 67 238 6.2E-33 T 11-10-2018 SYN_01205 5c3e8f204dc868a49ba5b18dfb6abe40 238 Gene3D G3DSA:3.30.1950.10 84 154 6.2E-33 T 11-10-2018 SYN_01205 5c3e8f204dc868a49ba5b18dfb6abe40 238 Pfam PF02563 Polysaccharide biosynthesis/export protein 79 150 1.8E-21 T 11-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 SYN_01533 0c18828613038c07101dccafc9f5b374 426 SUPERFAMILY SSF51556 57 368 3.74E-109 T 11-10-2018 IPR032466 Metal-dependent hydrolase SYN_01533 0c18828613038c07101dccafc9f5b374 426 Gene3D G3DSA:3.20.20.140 58 369 7.3E-146 T 11-10-2018 SYN_01533 0c18828613038c07101dccafc9f5b374 426 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 19 425 1.5E-131 T 11-10-2018 SYN_01533 0c18828613038c07101dccafc9f5b374 426 Gene3D G3DSA:2.30.40.10 9 422 7.3E-146 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 SYN_01533 0c18828613038c07101dccafc9f5b374 426 Hamap MF_00220_B Dihydroorotase [pyrC]. 3 425 46.336 T 11-10-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_01533 0c18828613038c07101dccafc9f5b374 426 Pfam PF01979 Amidohydrolase family 53 422 6.1E-40 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 SYN_01533 0c18828613038c07101dccafc9f5b374 426 ProSitePatterns PS00483 Dihydroorotase signature 2. 305 316 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 SYN_01533 0c18828613038c07101dccafc9f5b374 426 SUPERFAMILY SSF51338 1 425 1.44E-29 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 SYN_00418 194e99835d52d0d42e4ba1368acca77c 211 Pfam PF04367 Protein of unknown function (DUF502) 71 175 1.7E-35 T 11-10-2018 IPR007462 Protein of unknown function DUF502 SYN_01115 036823e3906d34d7fc25232ac9e9176b 213 TIGRFAM TIGR03370 VPLPA-CTERM: VPLPA-CTERM protein sorting domain 188 211 5.8E-10 T 11-10-2018 IPR022472 VPLPA-CTERM protein sorting domain SYN_01648 68077de7a2987b0009a030b582522289 642 Pfam PF10531 SLBB domain 374 422 1.0E-6 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_01648 68077de7a2987b0009a030b582522289 642 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 599 610 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_01648 68077de7a2987b0009a030b582522289 642 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 179 350 7.2E-45 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_01648 68077de7a2987b0009a030b582522289 642 Gene3D G3DSA:3.40.50.11540 184 362 1.6E-74 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_01648 68077de7a2987b0009a030b582522289 642 SUPERFAMILY SSF142019 131 371 7.85E-85 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_01648 68077de7a2987b0009a030b582522289 642 Gene3D G3DSA:3.40.30.10 26 119 3.5E-25 T 11-10-2018 SYN_01648 68077de7a2987b0009a030b582522289 642 SUPERFAMILY SSF142984 372 455 1.57E-24 T 11-10-2018 SYN_01648 68077de7a2987b0009a030b582522289 642 Pfam PF13237 4Fe-4S dicluster domain 562 610 1.1E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_01648 68077de7a2987b0009a030b582522289 642 SUPERFAMILY SSF52833 25 117 1.68E-21 T 11-10-2018 IPR036249 Thioredoxin-like superfamily SYN_01648 68077de7a2987b0009a030b582522289 642 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 473 484 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_01648 68077de7a2987b0009a030b582522289 642 Gene3D G3DSA:3.30.70.20 561 614 9.9E-13 T 11-10-2018 SYN_01648 68077de7a2987b0009a030b582522289 642 Gene3D G3DSA:1.20.1440.230 458 558 2.8E-35 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_01648 68077de7a2987b0009a030b582522289 642 Gene3D G3DSA:3.10.20.600 363 457 2.3E-32 T 11-10-2018 SYN_01648 68077de7a2987b0009a030b582522289 642 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 20 101 1.1E-5 T 11-10-2018 SYN_01648 68077de7a2987b0009a030b582522289 642 SUPERFAMILY SSF140490 456 557 4.45E-37 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_01648 68077de7a2987b0009a030b582522289 642 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 462 545 7.1E-32 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_01648 68077de7a2987b0009a030b582522289 642 SUPERFAMILY SSF54862 562 612 3.14E-14 T 11-10-2018 SYN_01648 68077de7a2987b0009a030b582522289 642 SMART SM00928 460 505 4.6E-22 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00692 cbbd07efcf22e26d83c11475244593a5 370 SUPERFAMILY SSF52518 4 245 6.77E-68 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold SYN_00692 cbbd07efcf22e26d83c11475244593a5 370 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 13 234 2.7E-69 T 11-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 SYN_00692 cbbd07efcf22e26d83c11475244593a5 370 Gene3D G3DSA:3.40.50.970 1 246 7.6E-95 T 11-10-2018 SYN_00692 cbbd07efcf22e26d83c11475244593a5 370 Gene3D G3DSA:3.40.50.920 247 367 9.1E-25 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 SYN_00692 cbbd07efcf22e26d83c11475244593a5 370 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 256 349 2.3E-24 T 11-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II SYN_00692 cbbd07efcf22e26d83c11475244593a5 370 SUPERFAMILY SSF52922 247 355 3.27E-20 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 SYN_02461 3b46a94bd45c7d0738af472a6961359a 391 Pfam PF01916 Deoxyhypusine synthase 77 371 3.8E-89 T 11-10-2018 IPR002773 Deoxyhypusine synthase GO:0008612 Reactome: R-HSA-204626 SYN_02461 3b46a94bd45c7d0738af472a6961359a 391 Hamap MF_00640 Deoxyhypusine synthase-like protein. 56 388 47.386 T 11-10-2018 IPR023496 Deoxyhypusine synthase-like GO:0016765 SYN_02461 3b46a94bd45c7d0738af472a6961359a 391 SUPERFAMILY SSF52467 53 382 2.26E-95 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily SYN_02461 3b46a94bd45c7d0738af472a6961359a 391 Gene3D G3DSA:3.40.910.10 50 379 4.0E-84 T 11-10-2018 IPR036982 Deoxyhypusine synthase superfamily GO:0008612 Reactome: R-HSA-204626 SYN_03778 3ca41dab131e6b1eb5e2e55502c07686 91 Pfam PF04977 Septum formation initiator 14 89 1.8E-20 T 11-10-2018 IPR007060 Septum formation initiator FtsL/DivIC SYN_00542 bede907ac06db98863397ecfc60f474c 161 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 SYN_00542 bede907ac06db98863397ecfc60f474c 161 SUPERFAMILY SSF46557 3 77 1.31E-23 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 SYN_00542 bede907ac06db98863397ecfc60f474c 161 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 29.08 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 SYN_00542 bede907ac06db98863397ecfc60f474c 161 Pfam PF03449 Transcription elongation factor, N-terminal 5 71 1.5E-25 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SYN_00542 bede907ac06db98863397ecfc60f474c 161 PIRSF PIRSF006092 1 158 9.4E-47 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 SYN_00542 bede907ac06db98863397ecfc60f474c 161 Gene3D G3DSA:3.10.50.30 77 156 2.3E-27 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 SYN_00542 bede907ac06db98863397ecfc60f474c 161 SUPERFAMILY SSF54534 80 155 8.76E-22 T 11-10-2018 SYN_00542 bede907ac06db98863397ecfc60f474c 161 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 154 7.2E-53 T 11-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 SYN_00542 bede907ac06db98863397ecfc60f474c 161 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 SYN_00542 bede907ac06db98863397ecfc60f474c 161 Gene3D G3DSA:1.10.287.180 1 75 4.2E-26 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 SYN_00542 bede907ac06db98863397ecfc60f474c 161 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 154 4.5E-28 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SYN_02788 8aea35c7f7cdb4adb5dbc4d87594f33a 304 SMART SM00729 29 246 4.0E-33 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SYN_02788 8aea35c7f7cdb4adb5dbc4d87594f33a 304 Pfam PF04055 Radical SAM superfamily 33 194 9.1E-16 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_02788 8aea35c7f7cdb4adb5dbc4d87594f33a 304 Gene3D G3DSA:3.20.20.70 27 244 1.9E-20 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_02788 8aea35c7f7cdb4adb5dbc4d87594f33a 304 SUPERFAMILY SSF102114 16 238 1.7E-37 T 11-10-2018 SYN_01511 faf01e8d6e0b4a4faced9c3d7493861a 442 Pfam PF13173 AAA domain 51 176 1.8E-25 T 11-10-2018 SYN_01511 faf01e8d6e0b4a4faced9c3d7493861a 442 SUPERFAMILY SSF52540 51 177 5.49E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01511 faf01e8d6e0b4a4faced9c3d7493861a 442 Pfam PF13635 Domain of unknown function (DUF4143) 230 383 2.7E-23 T 11-10-2018 IPR025420 Domain of unknown function DUF4143 SYN_01511 faf01e8d6e0b4a4faced9c3d7493861a 442 SMART SM00382 50 172 5.9E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_02075 085d0e3aa59d71ab542c74dc1c474ea3 443 Gene3D G3DSA:2.40.30.170 94 346 4.4E-113 T 11-10-2018 SYN_02075 085d0e3aa59d71ab542c74dc1c474ea3 443 Gene3D G3DSA:2.40.50.100 106 250 4.4E-113 T 11-10-2018 SYN_02075 085d0e3aa59d71ab542c74dc1c474ea3 443 Gene3D G3DSA:2.40.420.20 347 414 4.4E-113 T 11-10-2018 SYN_02075 085d0e3aa59d71ab542c74dc1c474ea3 443 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 107 336 5.7E-11 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SYN_02075 085d0e3aa59d71ab542c74dc1c474ea3 443 Gene3D G3DSA:1.10.287.470 141 214 4.4E-113 T 11-10-2018 SYN_02075 085d0e3aa59d71ab542c74dc1c474ea3 443 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 82 417 2.4E-82 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 SYN_02075 085d0e3aa59d71ab542c74dc1c474ea3 443 SUPERFAMILY SSF111369 95 343 4.05E-85 T 11-10-2018 SYN_02668 6d1f33a4f44973fb28332397ef06534b 363 Gene3D G3DSA:3.40.50.720 17 358 2.4E-70 T 11-10-2018 SYN_02668 6d1f33a4f44973fb28332397ef06534b 363 SUPERFAMILY SSF51735 29 357 1.01E-71 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_02668 6d1f33a4f44973fb28332397ef06534b 363 Pfam PF01370 NAD dependent epimerase/dehydratase family 33 259 5.7E-33 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 SYN_01364 2174d7c27d5b4eb64820f2212eca04df 752 Gene3D G3DSA:1.10.287.130 501 592 3.5E-17 T 11-10-2018 SYN_01364 2174d7c27d5b4eb64820f2212eca04df 752 SUPERFAMILY SSF47384 520 596 2.35E-9 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SYN_01364 2174d7c27d5b4eb64820f2212eca04df 752 SUPERFAMILY SSF55781 316 497 8.51E-24 T 11-10-2018 SYN_01364 2174d7c27d5b4eb64820f2212eca04df 752 Gene3D G3DSA:3.30.565.10 599 752 2.2E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_01364 2174d7c27d5b4eb64820f2212eca04df 752 Pfam PF16927 N-terminal 7TM region of histidine kinase 34 241 3.9E-10 T 11-10-2018 IPR031621 Histidine kinase, N-terminal 7TM region SYN_01364 2174d7c27d5b4eb64820f2212eca04df 752 SUPERFAMILY SSF55874 588 749 5.89E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_01364 2174d7c27d5b4eb64820f2212eca04df 752 PRINTS PR00344 Bacterial sensor protein C-terminal signature 711 729 6.9E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01364 2174d7c27d5b4eb64820f2212eca04df 752 PRINTS PR00344 Bacterial sensor protein C-terminal signature 698 708 6.9E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01364 2174d7c27d5b4eb64820f2212eca04df 752 PRINTS PR00344 Bacterial sensor protein C-terminal signature 735 748 6.9E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01364 2174d7c27d5b4eb64820f2212eca04df 752 PRINTS PR00344 Bacterial sensor protein C-terminal signature 680 694 6.9E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01364 2174d7c27d5b4eb64820f2212eca04df 752 Pfam PF13492 GAF domain 425 477 1.9E-6 T 11-10-2018 IPR003018 GAF domain GO:0005515 SYN_01364 2174d7c27d5b4eb64820f2212eca04df 752 SMART SM00387 640 751 8.2E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_01364 2174d7c27d5b4eb64820f2212eca04df 752 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 644 749 3.1E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_01364 2174d7c27d5b4eb64820f2212eca04df 752 SMART SM00388 524 598 6.6E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_01364 2174d7c27d5b4eb64820f2212eca04df 752 Pfam PF00512 His Kinase A (phospho-acceptor) domain 526 596 1.1E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_01364 2174d7c27d5b4eb64820f2212eca04df 752 SMART SM00065 334 485 1.4E-4 T 11-10-2018 IPR003018 GAF domain GO:0005515 SYN_01364 2174d7c27d5b4eb64820f2212eca04df 752 Gene3D G3DSA:3.30.450.40 320 486 2.8E-17 T 11-10-2018 IPR029016 GAF-like domain superfamily SYN_02792 bdf0e5064be4dc83b20c7f1dded95939 160 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 22 158 21.723 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SYN_02792 bdf0e5064be4dc83b20c7f1dded95939 160 Pfam PF02130 Uncharacterized protein family UPF0054 20 150 2.5E-35 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SYN_02792 bdf0e5064be4dc83b20c7f1dded95939 160 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 121 131 - T 11-10-2018 IPR020549 Endoribonuclease YbeY, conserved site SYN_02792 bdf0e5064be4dc83b20c7f1dded95939 160 Gene3D G3DSA:3.40.390.30 4 154 9.4E-42 T 11-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 SYN_02792 bdf0e5064be4dc83b20c7f1dded95939 160 SUPERFAMILY SSF55486 14 153 2.2E-37 T 11-10-2018 SYN_02792 bdf0e5064be4dc83b20c7f1dded95939 160 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 45 150 5.6E-34 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SYN_02248 3d4c1d309487144e5477b5ebf10cfc4d 131 Gene3D G3DSA:1.10.520.30 1 131 2.8E-27 T 11-10-2018 IPR023101 AF1862-like domain superfamily SYN_02248 3d4c1d309487144e5477b5ebf10cfc4d 131 SUPERFAMILY SSF158568 1 130 5.1E-31 T 11-10-2018 IPR023101 AF1862-like domain superfamily SYN_02248 3d4c1d309487144e5477b5ebf10cfc4d 131 TIGRFAM TIGR01881 cas_Cmr5: CRISPR type III-B/RAMP module-associated protein Cmr5 1 130 2.8E-17 T 11-10-2018 IPR010160 CRISPR-associated protein, Cmr5 SYN_02248 3d4c1d309487144e5477b5ebf10cfc4d 131 Pfam PF09701 CRISPR-associated protein (Cas_Cmr5) 4 128 8.9E-32 T 11-10-2018 IPR010160 CRISPR-associated protein, Cmr5 SYN_00215 88be3800a18cdb887a1d5cd2980e985f 374 Gene3D G3DSA:3.40.50.1980 176 371 2.4E-67 T 11-10-2018 SYN_00215 88be3800a18cdb887a1d5cd2980e985f 374 Gene3D G3DSA:3.40.50.1980 25 175 1.4E-45 T 11-10-2018 SYN_00215 88be3800a18cdb887a1d5cd2980e985f 374 SUPERFAMILY SSF53807 35 355 1.42E-50 T 11-10-2018 SYN_00215 88be3800a18cdb887a1d5cd2980e985f 374 Pfam PF01497 Periplasmic binding protein 51 301 3.5E-21 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain SYN_02549 3df09b754567682dac555ed5e56f94b6 346 SUPERFAMILY SSF54862 152 251 1.13E-21 T 11-10-2018 SYN_02549 3df09b754567682dac555ed5e56f94b6 346 Gene3D G3DSA:3.30.70.20 168 213 3.6E-7 T 11-10-2018 SYN_02549 3df09b754567682dac555ed5e56f94b6 346 Pfam PF00037 4Fe-4S binding domain 195 213 2.3E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_02549 3df09b754567682dac555ed5e56f94b6 346 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 199 210 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_02549 3df09b754567682dac555ed5e56f94b6 346 Gene3D G3DSA:3.30.70.20 214 254 1.1E-5 T 11-10-2018 SYN_02549 3df09b754567682dac555ed5e56f94b6 346 Pfam PF12800 4Fe-4S binding domain 227 240 0.0047 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_02549 3df09b754567682dac555ed5e56f94b6 346 Pfam PF04015 Domain of unknown function (DUF362) 45 303 1.1E-30 T 11-10-2018 IPR007160 Domain of unknown function DUF362 SYN_02456 1c535712f3b7bbdcb9af5d3302dd37a5 650 SUPERFAMILY SSF52922 505 639 1.44E-34 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 SYN_02456 1c535712f3b7bbdcb9af5d3302dd37a5 650 SMART SM00861 332 496 6.4E-76 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain SYN_02456 1c535712f3b7bbdcb9af5d3302dd37a5 650 Pfam PF02779 Transketolase, pyrimidine binding domain 332 491 1.5E-42 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain SYN_02456 1c535712f3b7bbdcb9af5d3302dd37a5 650 ProSitePatterns PS00801 Transketolase signature 1. 43 62 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 SYN_02456 1c535712f3b7bbdcb9af5d3302dd37a5 650 SUPERFAMILY SSF52518 17 394 4.68E-71 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold SYN_02456 1c535712f3b7bbdcb9af5d3302dd37a5 650 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 18 293 8.4E-119 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 SYN_02456 1c535712f3b7bbdcb9af5d3302dd37a5 650 ProSitePatterns PS00802 Transketolase signature 2. 438 454 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 SYN_02456 1c535712f3b7bbdcb9af5d3302dd37a5 650 Pfam PF02780 Transketolase, C-terminal domain 508 630 2.4E-29 T 11-10-2018 IPR033248 Transketolase, C-terminal domain SYN_02456 1c535712f3b7bbdcb9af5d3302dd37a5 650 SUPERFAMILY SSF52518 332 516 2.43E-61 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold SYN_02456 1c535712f3b7bbdcb9af5d3302dd37a5 650 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 19 638 2.9E-264 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 SYN_02456 1c535712f3b7bbdcb9af5d3302dd37a5 650 Gene3D G3DSA:3.40.50.920 508 642 1.0E-39 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 SYN_02456 1c535712f3b7bbdcb9af5d3302dd37a5 650 Gene3D G3DSA:3.40.50.970 331 502 1.7E-70 T 11-10-2018 SYN_02456 1c535712f3b7bbdcb9af5d3302dd37a5 650 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 17 639 45.885 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 SYN_03043 ed902d7c6f1a98a284b98dc14aef0201 202 Pfam PF05643 Putative bacterial lipoprotein (DUF799) 13 164 9.6E-13 T 11-10-2018 IPR008517 Protein of unknown function DUF799 SYN_03043 ed902d7c6f1a98a284b98dc14aef0201 202 Gene3D G3DSA:3.40.50.10610 32 194 3.8E-19 T 11-10-2018 SYN_01273 9bfdaa23976f1b987637307ac6d42ab5 453 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 6 445 2.8E-144 T 11-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 SYN_01273 9bfdaa23976f1b987637307ac6d42ab5 453 Gene3D G3DSA:3.40.50.12160 5 134 2.2E-41 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily SYN_01273 9bfdaa23976f1b987637307ac6d42ab5 453 SMART SM00729 151 369 7.7E-53 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SYN_01273 9bfdaa23976f1b987637307ac6d42ab5 453 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 4 448 67.216 T 11-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 SYN_01273 9bfdaa23976f1b987637307ac6d42ab5 453 Pfam PF01938 TRAM domain 381 449 1.5E-5 T 11-10-2018 IPR002792 TRAM domain SYN_01273 9bfdaa23976f1b987637307ac6d42ab5 453 Pfam PF00919 Uncharacterized protein family UPF0004 6 104 1.4E-26 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 SYN_01273 9bfdaa23976f1b987637307ac6d42ab5 453 Pfam PF04055 Radical SAM superfamily 157 327 1.2E-26 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_01273 9bfdaa23976f1b987637307ac6d42ab5 453 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 155 175 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 SYN_01273 9bfdaa23976f1b987637307ac6d42ab5 453 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 6 445 4.9E-123 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 SYN_01273 9bfdaa23976f1b987637307ac6d42ab5 453 SUPERFAMILY SSF102114 131 371 4.58E-60 T 11-10-2018 SYN_01273 9bfdaa23976f1b987637307ac6d42ab5 453 Gene3D G3DSA:3.80.30.20 150 383 1.5E-79 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe SYN_01273 9bfdaa23976f1b987637307ac6d42ab5 453 Gene3D G3DSA:2.40.50.140 384 452 7.1E-12 T 11-10-2018 SYN_01186 afb7c0ffd036392c84ad8cca22647a5f 297 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 107 118 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_01186 afb7c0ffd036392c84ad8cca22647a5f 297 Pfam PF00037 4Fe-4S binding domain 101 122 4.4E-5 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_01186 afb7c0ffd036392c84ad8cca22647a5f 297 Pfam PF00037 4Fe-4S binding domain 62 84 4.2E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_01186 afb7c0ffd036392c84ad8cca22647a5f 297 Gene3D G3DSA:3.30.70.20 63 123 3.7E-13 T 11-10-2018 SYN_01186 afb7c0ffd036392c84ad8cca22647a5f 297 SUPERFAMILY SSF52540 1 296 1.21E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01186 afb7c0ffd036392c84ad8cca22647a5f 297 SUPERFAMILY SSF54862 58 129 2.47E-16 T 11-10-2018 SYN_01186 afb7c0ffd036392c84ad8cca22647a5f 297 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 269 2.1E-14 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SYN_01396 8022346f1d3a5d7711fa9474c8c9639f 423 Pfam PF00162 Phosphoglycerate kinase 9 412 1.0E-151 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_01396 8022346f1d3a5d7711fa9474c8c9639f 423 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 422 40.172 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_01396 8022346f1d3a5d7711fa9474c8c9639f 423 PRINTS PR00477 Phosphoglycerate kinase family signature 398 415 2.2E-84 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_01396 8022346f1d3a5d7711fa9474c8c9639f 423 PRINTS PR00477 Phosphoglycerate kinase family signature 341 366 2.2E-84 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_01396 8022346f1d3a5d7711fa9474c8c9639f 423 PRINTS PR00477 Phosphoglycerate kinase family signature 375 386 2.2E-84 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_01396 8022346f1d3a5d7711fa9474c8c9639f 423 PRINTS PR00477 Phosphoglycerate kinase family signature 13 29 2.2E-84 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_01396 8022346f1d3a5d7711fa9474c8c9639f 423 PRINTS PR00477 Phosphoglycerate kinase family signature 165 187 2.2E-84 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_01396 8022346f1d3a5d7711fa9474c8c9639f 423 PRINTS PR00477 Phosphoglycerate kinase family signature 133 148 2.2E-84 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_01396 8022346f1d3a5d7711fa9474c8c9639f 423 PRINTS PR00477 Phosphoglycerate kinase family signature 195 217 2.2E-84 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_01396 8022346f1d3a5d7711fa9474c8c9639f 423 PRINTS PR00477 Phosphoglycerate kinase family signature 219 238 2.2E-84 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_01396 8022346f1d3a5d7711fa9474c8c9639f 423 PRINTS PR00477 Phosphoglycerate kinase family signature 34 56 2.2E-84 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_01396 8022346f1d3a5d7711fa9474c8c9639f 423 PIRSF PIRSF000724 1 423 1.3E-144 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_01396 8022346f1d3a5d7711fa9474c8c9639f 423 SUPERFAMILY SSF53748 6 423 6.01E-148 T 11-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_01396 8022346f1d3a5d7711fa9474c8c9639f 423 Gene3D G3DSA:3.40.50.1260 5 198 3.1E-67 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_01396 8022346f1d3a5d7711fa9474c8c9639f 423 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 18 28 - T 11-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_01396 8022346f1d3a5d7711fa9474c8c9639f 423 Gene3D G3DSA:3.40.50.1260 210 422 7.8E-83 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_02396 b82be2fdd199b1f17f5e10881dd552a3 512 Gene3D G3DSA:2.40.180.10 26 506 6.5E-227 T 11-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SYN_02396 b82be2fdd199b1f17f5e10881dd552a3 512 Pfam PF06628 Catalase-related immune-responsive 438 500 3.4E-21 T 11-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 SYN_02396 b82be2fdd199b1f17f5e10881dd552a3 512 Pfam PF00199 Catalase 31 412 2.4E-188 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 SYN_02396 b82be2fdd199b1f17f5e10881dd552a3 512 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 357 365 - T 11-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 SYN_02396 b82be2fdd199b1f17f5e10881dd552a3 512 SUPERFAMILY SSF56634 25 506 1.1E-213 T 11-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 SYN_02396 b82be2fdd199b1f17f5e10881dd552a3 512 ProSitePatterns PS00438 Catalase proximal active site signature. 67 83 - T 11-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 SYN_02396 b82be2fdd199b1f17f5e10881dd552a3 512 SMART SM01060 31 415 3.3E-286 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 SYN_02396 b82be2fdd199b1f17f5e10881dd552a3 512 PIRSF PIRSF038928 20 503 7.0E-220 T 11-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 SYN_02396 b82be2fdd199b1f17f5e10881dd552a3 512 PRINTS PR00067 Catalase signature 344 370 1.2E-72 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 SYN_02396 b82be2fdd199b1f17f5e10881dd552a3 512 PRINTS PR00067 Catalase signature 107 125 1.2E-72 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 SYN_02396 b82be2fdd199b1f17f5e10881dd552a3 512 PRINTS PR00067 Catalase signature 128 145 1.2E-72 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 SYN_02396 b82be2fdd199b1f17f5e10881dd552a3 512 PRINTS PR00067 Catalase signature 312 339 1.2E-72 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 SYN_02396 b82be2fdd199b1f17f5e10881dd552a3 512 PRINTS PR00067 Catalase signature 147 165 1.2E-72 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 SYN_02396 b82be2fdd199b1f17f5e10881dd552a3 512 PRINTS PR00067 Catalase signature 44 67 1.2E-72 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 SYN_02687 c8261dcd8ee55e634c46c00d39cc5067 130 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 86 114 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 SYN_02687 c8261dcd8ee55e634c46c00d39cc5067 130 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 78 111 1.4E-8 T 11-10-2018 IPR001451 Hexapeptide repeat SYN_02687 c8261dcd8ee55e634c46c00d39cc5067 130 SUPERFAMILY SSF51161 10 129 1.19E-32 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily SYN_02687 c8261dcd8ee55e634c46c00d39cc5067 130 Gene3D G3DSA:2.160.10.10 2 130 4.8E-32 T 11-10-2018 SYN_02993 42df4a699a24da565185d2288c61c90a 542 Gene3D G3DSA:1.20.1270.20 1 135 1.1E-45 T 11-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 SYN_02993 42df4a699a24da565185d2288c61c90a 542 PIRSF PIRSF000076 1 542 4.6E-228 T 11-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 SYN_02993 42df4a699a24da565185d2288c61c90a 542 Gene3D G3DSA:1.20.1270.20 144 226 9.4E-31 T 11-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 SYN_02993 42df4a699a24da565185d2288c61c90a 542 SUPERFAMILY SSF56821 1 541 1.19E-195 T 11-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 SYN_02993 42df4a699a24da565185d2288c61c90a 542 Gene3D G3DSA:3.40.50.2030 228 372 4.3E-66 T 11-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 SYN_02993 42df4a699a24da565185d2288c61c90a 542 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 542 20.942 T 11-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 SYN_02993 42df4a699a24da565185d2288c61c90a 542 Gene3D G3DSA:3.40.50.2030 373 541 4.1E-65 T 11-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 SYN_02993 42df4a699a24da565185d2288c61c90a 542 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 541 5.5E-230 T 11-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 SYN_02993 42df4a699a24da565185d2288c61c90a 542 Pfam PF03063 Prismane/CO dehydrogenase family 1 538 3.0E-170 T 11-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 SYN_02621 cb7da6374b3caa7416ff74c9bdd6ee85 283 Pfam PF12697 Alpha/beta hydrolase family 19 260 8.6E-18 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 SYN_02621 cb7da6374b3caa7416ff74c9bdd6ee85 283 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 17 267 4.3E-73 T 11-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 SYN_02621 cb7da6374b3caa7416ff74c9bdd6ee85 283 SUPERFAMILY SSF53474 6 267 2.86E-45 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold SYN_02621 cb7da6374b3caa7416ff74c9bdd6ee85 283 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 6 267 29.428 T 11-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 SYN_02621 cb7da6374b3caa7416ff74c9bdd6ee85 283 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 1.3E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 SYN_02621 cb7da6374b3caa7416ff74c9bdd6ee85 283 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 1.3E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 SYN_02621 cb7da6374b3caa7416ff74c9bdd6ee85 283 PRINTS PR00111 Alpha/beta hydrolase fold signature 42 57 1.3E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 SYN_02621 cb7da6374b3caa7416ff74c9bdd6ee85 283 Gene3D G3DSA:3.40.50.1820 5 266 1.8E-53 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold SYN_02714 5b0a3de0812a004e4aae52495e3a7f54 740 PIRSF PIRSF037532 1 740 5.5E-212 T 11-10-2018 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator SYN_02714 5b0a3de0812a004e4aae52495e3a7f54 740 SMART SM00387 628 737 3.4E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_02714 5b0a3de0812a004e4aae52495e3a7f54 740 Gene3D G3DSA:3.30.450.20 385 510 5.5E-19 T 11-10-2018 SYN_02714 5b0a3de0812a004e4aae52495e3a7f54 740 SUPERFAMILY SSF55874 593 734 1.57E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_02714 5b0a3de0812a004e4aae52495e3a7f54 740 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 629 735 2.5E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_02714 5b0a3de0812a004e4aae52495e3a7f54 740 Gene3D G3DSA:3.30.565.10 591 739 9.1E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_02714 5b0a3de0812a004e4aae52495e3a7f54 740 SMART SM00304 329 381 1.6E-12 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SYN_02714 5b0a3de0812a004e4aae52495e3a7f54 740 SUPERFAMILY SSF158472 331 378 6.93E-11 T 11-10-2018 SYN_02714 5b0a3de0812a004e4aae52495e3a7f54 740 Pfam PF00672 HAMP domain 331 377 3.5E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SYN_02714 5b0a3de0812a004e4aae52495e3a7f54 740 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 682 1.5E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_02714 5b0a3de0812a004e4aae52495e3a7f54 740 PRINTS PR00344 Bacterial sensor protein C-terminal signature 686 696 1.5E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_02714 5b0a3de0812a004e4aae52495e3a7f54 740 PRINTS PR00344 Bacterial sensor protein C-terminal signature 721 734 1.5E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_02714 5b0a3de0812a004e4aae52495e3a7f54 740 PRINTS PR00344 Bacterial sensor protein C-terminal signature 697 715 1.5E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_02714 5b0a3de0812a004e4aae52495e3a7f54 740 Gene3D G3DSA:1.10.287.130 511 585 2.0E-13 T 11-10-2018 SYN_02714 5b0a3de0812a004e4aae52495e3a7f54 740 SMART SM00091 395 461 5.0E-7 T 11-10-2018 IPR000014 PAS domain SYN_02714 5b0a3de0812a004e4aae52495e3a7f54 740 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 392 515 1.3E-11 T 11-10-2018 IPR000014 PAS domain SYN_02714 5b0a3de0812a004e4aae52495e3a7f54 740 SUPERFAMILY SSF55785 383 507 8.9E-18 T 11-10-2018 IPR035965 PAS domain superfamily SYN_02714 5b0a3de0812a004e4aae52495e3a7f54 740 SMART SM00388 517 588 1.8E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_02714 5b0a3de0812a004e4aae52495e3a7f54 740 SUPERFAMILY SSF47384 503 585 1.24E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SYN_02714 5b0a3de0812a004e4aae52495e3a7f54 740 Gene3D G3DSA:1.20.1480.50 295 384 3.2E-16 T 11-10-2018 SYN_02714 5b0a3de0812a004e4aae52495e3a7f54 740 Pfam PF00989 PAS fold 397 505 5.1E-14 T 11-10-2018 IPR013767 PAS fold GO:0006355 SYN_02714 5b0a3de0812a004e4aae52495e3a7f54 740 Pfam PF00512 His Kinase A (phospho-acceptor) domain 519 585 7.8E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_02714 5b0a3de0812a004e4aae52495e3a7f54 740 SUPERFAMILY SSF103190 146 274 6.75E-5 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily SYN_01955 5d67c7770a5f57e47fa14d2325da08be 479 PIRSF PIRSF019015 12 469 2.5E-164 T 11-10-2018 IPR027017 Uncharacterised peptidase with NlpC/P60 domain, YkfC type SYN_01955 5d67c7770a5f57e47fa14d2325da08be 479 Pfam PF00877 NlpC/P60 family 322 405 1.4E-10 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain SYN_01955 5d67c7770a5f57e47fa14d2325da08be 479 SUPERFAMILY SSF54001 302 414 1.31E-15 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily SYN_01955 5d67c7770a5f57e47fa14d2325da08be 479 Gene3D G3DSA:3.90.1720.10 292 459 6.6E-44 T 11-10-2018 SYN_01955 5d67c7770a5f57e47fa14d2325da08be 479 Pfam PF12913 SH3 domain (SH3b1 type) 167 218 1.0E-21 T 11-10-2018 IPR039439 SH3b1 domain SYN_01955 5d67c7770a5f57e47fa14d2325da08be 479 Pfam PF12912 NLPC_P60 stabilising domain, N term 33 144 3.0E-31 T 11-10-2018 IPR025606 NLPC/P60, N-terminal domain SYN_01955 5d67c7770a5f57e47fa14d2325da08be 479 Pfam PF12914 SH3 domain of SH3b2 type 226 271 3.0E-16 T 11-10-2018 IPR026864 SH3b2-type SH3 domain SYN_02437 3b063632b5c7506ec4cc4c0867bcd552 258 Gene3D G3DSA:3.90.550.10 5 256 1.3E-75 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_02437 3b063632b5c7506ec4cc4c0867bcd552 258 Pfam PF00483 Nucleotidyl transferase 16 231 3.2E-19 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 SYN_02437 3b063632b5c7506ec4cc4c0867bcd552 258 SUPERFAMILY SSF53448 15 251 4.59E-60 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_01313 cac442ff83e3ac814564d8a51a22d50b 207 Gene3D G3DSA:3.90.1680.10 12 207 1.8E-63 T 11-10-2018 IPR036590 SOS response associated peptidase-like SYN_01313 cac442ff83e3ac814564d8a51a22d50b 207 Pfam PF02586 SOS response associated peptidase (SRAP) 1 205 5.3E-63 T 11-10-2018 IPR003738 SOS response associated peptidase (SRAP) SYN_01313 cac442ff83e3ac814564d8a51a22d50b 207 SUPERFAMILY SSF143081 2 202 2.22E-65 T 11-10-2018 IPR036590 SOS response associated peptidase-like SYN_01769 3b48dd4ae4c0b1e77bd77aa382888ac1 377 Pfam PF01321 Creatinase/Prolidase N-terminal domain 27 151 2.2E-24 T 11-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 SYN_01769 3b48dd4ae4c0b1e77bd77aa382888ac1 377 SUPERFAMILY SSF55920 148 377 1.7E-79 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like SYN_01769 3b48dd4ae4c0b1e77bd77aa382888ac1 377 Gene3D G3DSA:3.90.230.10 151 377 1.6E-84 T 11-10-2018 SYN_01769 3b48dd4ae4c0b1e77bd77aa382888ac1 377 Gene3D G3DSA:3.40.350.10 22 150 6.1E-30 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal SYN_01769 3b48dd4ae4c0b1e77bd77aa382888ac1 377 Pfam PF00557 Metallopeptidase family M24 159 360 1.5E-68 T 11-10-2018 IPR000994 Peptidase M24 SYN_01769 3b48dd4ae4c0b1e77bd77aa382888ac1 377 SUPERFAMILY SSF53092 9 149 3.14E-26 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal SYN_01769 3b48dd4ae4c0b1e77bd77aa382888ac1 377 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 307 319 - T 11-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site SYN_01769 3b48dd4ae4c0b1e77bd77aa382888ac1 377 PRINTS PR00599 Methionine aminopeptidase-1 signature 231 247 2.4E-7 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 SYN_01769 3b48dd4ae4c0b1e77bd77aa382888ac1 377 PRINTS PR00599 Methionine aminopeptidase-1 signature 329 341 2.4E-7 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 SYN_01769 3b48dd4ae4c0b1e77bd77aa382888ac1 377 PRINTS PR00599 Methionine aminopeptidase-1 signature 209 222 2.4E-7 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 SYN_01888 115f33b62a52a26fbfefc3e1810989ed 501 SMART SM00382 31 186 0.0011 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01888 115f33b62a52a26fbfefc3e1810989ed 501 SMART SM00382 335 490 0.0016 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01888 115f33b62a52a26fbfefc3e1810989ed 501 Gene3D G3DSA:3.40.50.300 324 412 1.1E-5 T 11-10-2018 SYN_01888 115f33b62a52a26fbfefc3e1810989ed 501 Pfam PF00005 ABC transporter 333 445 1.7E-8 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_01888 115f33b62a52a26fbfefc3e1810989ed 501 Gene3D G3DSA:3.40.50.300 418 487 1.7E-15 T 11-10-2018 SYN_01888 115f33b62a52a26fbfefc3e1810989ed 501 SUPERFAMILY SSF52540 3 183 5.63E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01888 115f33b62a52a26fbfefc3e1810989ed 501 SUPERFAMILY SSF52540 305 486 1.02E-23 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01888 115f33b62a52a26fbfefc3e1810989ed 501 ProSitePatterns PS00211 ABC transporters family signature. 114 128 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_01888 115f33b62a52a26fbfefc3e1810989ed 501 Gene3D G3DSA:3.40.50.300 5 83 5.7E-11 T 11-10-2018 SYN_01888 115f33b62a52a26fbfefc3e1810989ed 501 Gene3D G3DSA:3.40.50.300 84 236 2.0E-21 T 11-10-2018 SYN_01888 115f33b62a52a26fbfefc3e1810989ed 501 Pfam PF00005 ABC transporter 24 142 1.2E-16 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_00176 4881ce09e71611a7ad3841ae3a0915ff 618 Gene3D G3DSA:3.20.20.330 3 299 8.6E-91 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 SYN_00176 4881ce09e71611a7ad3841ae3a0915ff 618 SUPERFAMILY SSF51730 321 611 2.94E-70 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like SYN_00176 4881ce09e71611a7ad3841ae3a0915ff 618 Pfam PF02574 Homocysteine S-methyltransferase 16 288 4.3E-58 T 11-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 SYN_00176 4881ce09e71611a7ad3841ae3a0915ff 618 Pfam PF02219 Methylenetetrahydrofolate reductase 325 610 9.7E-34 T 11-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 SYN_00176 4881ce09e71611a7ad3841ae3a0915ff 618 SUPERFAMILY SSF82282 6 371 6.28E-100 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 SYN_00176 4881ce09e71611a7ad3841ae3a0915ff 618 Gene3D G3DSA:3.20.20.220 324 614 5.2E-59 T 11-10-2018 SYN_01454 fb9ff4a75e6d1f09757f771e8eef4304 933 Gene3D G3DSA:1.10.730.20 642 933 7.9E-100 T 11-10-2018 SYN_01454 fb9ff4a75e6d1f09757f771e8eef4304 933 Pfam PF08264 Anticodon-binding domain of tRNA 687 842 1.6E-35 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 SYN_01454 fb9ff4a75e6d1f09757f771e8eef4304 933 Gene3D G3DSA:3.90.740.10 194 405 3.0E-250 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 SYN_01454 fb9ff4a75e6d1f09757f771e8eef4304 933 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 14 843 2.0E-288 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 SYN_01454 fb9ff4a75e6d1f09757f771e8eef4304 933 Pfam PF06827 Zinc finger found in FPG and IleRS 901 929 2.3E-8 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 SYN_01454 fb9ff4a75e6d1f09757f771e8eef4304 933 Gene3D G3DSA:3.40.50.620 24 631 3.0E-250 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_01454 fb9ff4a75e6d1f09757f771e8eef4304 933 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 932 20.854 T 11-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 SYN_01454 fb9ff4a75e6d1f09757f771e8eef4304 933 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 68 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_01454 fb9ff4a75e6d1f09757f771e8eef4304 933 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 643 5.7E-205 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_01454 fb9ff4a75e6d1f09757f771e8eef4304 933 SUPERFAMILY SSF50677 203 400 1.26E-57 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 SYN_01454 fb9ff4a75e6d1f09757f771e8eef4304 933 SUPERFAMILY SSF47323 654 932 5.23E-79 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_01454 fb9ff4a75e6d1f09757f771e8eef4304 933 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 398 413 2.1E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 SYN_01454 fb9ff4a75e6d1f09757f771e8eef4304 933 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 234 257 2.1E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 SYN_01454 fb9ff4a75e6d1f09757f771e8eef4304 933 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 563 572 2.1E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 SYN_01454 fb9ff4a75e6d1f09757f771e8eef4304 933 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 50 61 2.1E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 SYN_01454 fb9ff4a75e6d1f09757f771e8eef4304 933 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 529 542 2.1E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 SYN_01454 fb9ff4a75e6d1f09757f771e8eef4304 933 SUPERFAMILY SSF52374 1 649 3.22E-145 T 11-10-2018 SYN_01613 2cf14a7c58ed1dce085e6c94e0311702 698 Pfam PF00120 Glutamine synthetase, catalytic domain 186 370 2.2E-18 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SYN_01613 2cf14a7c58ed1dce085e6c94e0311702 698 Pfam PF12437 Glutamine synthetase type III N terminal 4 167 6.5E-76 T 11-10-2018 IPR022147 Glutamine synthetase type III N-terminal GO:0004356 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SYN_01613 2cf14a7c58ed1dce085e6c94e0311702 698 Gene3D G3DSA:1.20.120.1560 556 697 2.2E-37 T 11-10-2018 SYN_01613 2cf14a7c58ed1dce085e6c94e0311702 698 SMART SM01230 168 453 1.4E-54 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SYN_01613 2cf14a7c58ed1dce085e6c94e0311702 698 Gene3D G3DSA:3.30.590.10 176 410 9.1E-28 T 11-10-2018 SYN_01613 2cf14a7c58ed1dce085e6c94e0311702 698 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 313 328 - T 11-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 SYN_01613 2cf14a7c58ed1dce085e6c94e0311702 698 SUPERFAMILY SSF55931 158 571 6.47E-75 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 SYN_00985 1180bf24fd1e5a05e7d7c740090201c8 218 Gene3D G3DSA:2.40.50.620 42 103 1.8E-13 T 11-10-2018 SYN_00985 1180bf24fd1e5a05e7d7c740090201c8 218 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 14 213 1.6E-88 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00985 1180bf24fd1e5a05e7d7c740090201c8 218 Pfam PF00297 Ribosomal protein L3 108 189 9.8E-19 T 11-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_00985 1180bf24fd1e5a05e7d7c740090201c8 218 ProSitePatterns PS00474 Ribosomal protein L3 signature. 111 134 - T 11-10-2018 IPR019926 Ribosomal protein L3, conserved site SYN_00985 1180bf24fd1e5a05e7d7c740090201c8 218 SUPERFAMILY SSF50447 5 217 4.59E-78 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily SYN_00985 1180bf24fd1e5a05e7d7c740090201c8 218 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 11 216 38.463 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00985 1180bf24fd1e5a05e7d7c740090201c8 218 Gene3D G3DSA:2.40.30.10 129 218 2.1E-15 T 11-10-2018 SYN_01060 6b5a6e4195754023667f0e59888ea01a 188 SUPERFAMILY SSF143555 12 142 7.19E-34 T 11-10-2018 SYN_01060 6b5a6e4195754023667f0e59888ea01a 188 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 147 182 8.6E-7 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 SYN_01060 6b5a6e4195754023667f0e59888ea01a 188 Pfam PF02663 FmdE, Molybdenum formylmethanofuran dehydrogenase operon 21 112 1.2E-29 T 11-10-2018 IPR003814 Formylmethanofuran dehydrogenase, subunit E domain SYN_01060 6b5a6e4195754023667f0e59888ea01a 188 Gene3D G3DSA:3.30.1330.130 3 141 4.4E-28 T 11-10-2018 SYN_01453 aeaf70e9dd3b2f0e46ae8518e5af1aa4 161 Pfam PF01252 Signal peptidase (SPase) II 13 154 6.7E-38 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 SYN_01453 aeaf70e9dd3b2f0e46ae8518e5af1aa4 161 ProSitePatterns PS00855 Signal peptidases II signature. 102 114 - T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 SYN_01453 aeaf70e9dd3b2f0e46ae8518e5af1aa4 161 TIGRFAM TIGR00077 lspA: signal peptidase II 2 160 7.7E-36 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 SYN_01453 aeaf70e9dd3b2f0e46ae8518e5af1aa4 161 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 3 160 18.378 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 SYN_01453 aeaf70e9dd3b2f0e46ae8518e5af1aa4 161 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 135 151 2.9E-17 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 SYN_01453 aeaf70e9dd3b2f0e46ae8518e5af1aa4 161 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 99 114 2.9E-17 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 SYN_01453 aeaf70e9dd3b2f0e46ae8518e5af1aa4 161 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 50 58 2.9E-17 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 SYN_00441 5205051044a49aad11e8b2e92b21d164 67 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 4 67 3.5E-19 T 11-10-2018 IPR010035 ThiS, thiamine-biosynthesis SYN_00441 5205051044a49aad11e8b2e92b21d164 67 Gene3D G3DSA:3.10.20.30 3 67 5.0E-20 T 11-10-2018 IPR012675 Beta-grasp domain superfamily SYN_00441 5205051044a49aad11e8b2e92b21d164 67 SUPERFAMILY SSF54285 3 66 3.27E-16 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SYN_00441 5205051044a49aad11e8b2e92b21d164 67 Pfam PF02597 ThiS family 5 67 1.9E-10 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 SYN_01404 fbc310ea0291dfba6240cec7d70348c3 784 SMART SM00065 53 213 7.3E-10 T 11-10-2018 IPR003018 GAF domain GO:0005515 SYN_01404 fbc310ea0291dfba6240cec7d70348c3 784 Gene3D G3DSA:3.30.450.90 360 498 1.8E-38 T 11-10-2018 SYN_01404 fbc310ea0291dfba6240cec7d70348c3 784 Gene3D G3DSA:3.40.50.300 499 784 4.0E-106 T 11-10-2018 SYN_01404 fbc310ea0291dfba6240cec7d70348c3 784 Gene3D G3DSA:3.30.450.40 33 216 7.3E-33 T 11-10-2018 IPR029016 GAF-like domain superfamily SYN_01404 fbc310ea0291dfba6240cec7d70348c3 784 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 592 606 - T 11-10-2018 IPR001482 Type II/IV secretion system protein SYN_01404 fbc310ea0291dfba6240cec7d70348c3 784 SUPERFAMILY SSF52540 385 781 1.63E-83 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01404 fbc310ea0291dfba6240cec7d70348c3 784 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 255 356 1.2E-13 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal SYN_01404 fbc310ea0291dfba6240cec7d70348c3 784 SUPERFAMILY SSF160246 218 352 5.23E-19 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily SYN_01404 fbc310ea0291dfba6240cec7d70348c3 784 SMART SM00382 525 650 6.3E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01404 fbc310ea0291dfba6240cec7d70348c3 784 Pfam PF01590 GAF domain 97 202 7.6E-9 T 11-10-2018 IPR003018 GAF domain GO:0005515 SYN_01404 fbc310ea0291dfba6240cec7d70348c3 784 Pfam PF00437 Type II/IV secretion system protein 400 664 3.6E-69 T 11-10-2018 IPR001482 Type II/IV secretion system protein SYN_01404 fbc310ea0291dfba6240cec7d70348c3 784 SUPERFAMILY SSF55781 43 219 1.35E-27 T 11-10-2018 SYN_00620 340fc71df6eb16659a40c22bc19ba784 288 Gene3D G3DSA:3.20.20.150 6 271 2.2E-14 T 11-10-2018 SYN_00620 340fc71df6eb16659a40c22bc19ba784 288 SUPERFAMILY SSF51658 13 185 1.7E-16 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily SYN_00620 340fc71df6eb16659a40c22bc19ba784 288 Pfam PF01261 Xylose isomerase-like TIM barrel 81 187 6.2E-9 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain SYN_01020 1db57bee3fe06ff3765c2f69d9daa3aa 271 Gene3D G3DSA:3.40.50.1220 26 257 1.3E-81 T 11-10-2018 SYN_01020 1db57bee3fe06ff3765c2f69d9daa3aa 271 SUPERFAMILY SSF52467 10 262 8.73E-84 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily SYN_01020 1db57bee3fe06ff3765c2f69d9daa3aa 271 Gene3D G3DSA:3.30.1600.10 42 184 1.3E-81 T 11-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily SYN_01020 1db57bee3fe06ff3765c2f69d9daa3aa 271 Pfam PF02146 Sir2 family 33 214 2.1E-52 T 11-10-2018 IPR003000 Sirtuin family GO:0070403 SYN_02640 fb18131f2ba809d9b5f41ae858fbdcd5 563 Gene3D G3DSA:3.30.300.310 462 562 4.2E-30 T 11-10-2018 SYN_02640 fb18131f2ba809d9b5f41ae858fbdcd5 563 Pfam PF13193 AMP-binding enzyme C-terminal domain 474 549 1.8E-19 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain SYN_02640 fb18131f2ba809d9b5f41ae858fbdcd5 563 ProSitePatterns PS00455 Putative AMP-binding domain signature. 215 226 - T 11-10-2018 IPR020845 AMP-binding, conserved site SYN_02640 fb18131f2ba809d9b5f41ae858fbdcd5 563 Gene3D G3DSA:3.40.50.12780 15 461 9.2E-113 T 11-10-2018 SYN_02640 fb18131f2ba809d9b5f41ae858fbdcd5 563 Pfam PF00501 AMP-binding enzyme 36 465 4.0E-98 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 SYN_02640 fb18131f2ba809d9b5f41ae858fbdcd5 563 SUPERFAMILY SSF56801 24 559 8.63E-144 T 11-10-2018 SYN_00733 fca9bd4006cb16f3a1107e530158d45b 436 Pfam PF00860 Permease family 25 400 1.2E-37 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 SYN_01603 bcb251f604592605b6195e6911c75950 125 Pfam PF01196 Ribosomal protein L17 20 116 8.1E-36 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01603 bcb251f604592605b6195e6911c75950 125 SUPERFAMILY SSF64263 1 116 1.57E-47 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01603 bcb251f604592605b6195e6911c75950 125 TIGRFAM TIGR00059 L17: ribosomal protein bL17 8 116 1.0E-43 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01603 bcb251f604592605b6195e6911c75950 125 Gene3D G3DSA:3.90.1030.10 1 116 1.8E-48 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01603 bcb251f604592605b6195e6911c75950 125 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.893 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_02920 0be4cabcf3b15a59e869f2bcdba6d33a 216 Gene3D G3DSA:3.40.50.360 26 203 9.6E-39 T 11-10-2018 IPR029039 Flavoprotein-like superfamily SYN_02920 0be4cabcf3b15a59e869f2bcdba6d33a 216 Pfam PF03358 NADPH-dependent FMN reductase 26 182 1.0E-29 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 SYN_02920 0be4cabcf3b15a59e869f2bcdba6d33a 216 SUPERFAMILY SSF52218 26 214 1.86E-46 T 11-10-2018 IPR029039 Flavoprotein-like superfamily SYN_00910 9c0827ad3b10ad5270748900b32bf984 190 Gene3D G3DSA:3.40.50.150 1 189 5.2E-54 T 11-10-2018 SYN_00910 9c0827ad3b10ad5270748900b32bf984 190 SUPERFAMILY SSF53335 1 181 7.19E-44 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_00910 9c0827ad3b10ad5270748900b32bf984 190 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 182 2.6E-44 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 SYN_00910 9c0827ad3b10ad5270748900b32bf984 190 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 116 122 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SYN_00910 9c0827ad3b10ad5270748900b32bf984 190 Pfam PF03602 Conserved hypothetical protein 95 1 181 2.0E-48 T 11-10-2018 SYN_00910 9c0827ad3b10ad5270748900b32bf984 190 PIRSF PIRSF004553 1 185 1.6E-50 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 SYN_02076 516f1ea5ef7acf03ba7473af940e22bf 191 Gene3D G3DSA:1.10.357.10 1 191 3.0E-56 T 11-10-2018 SYN_02076 516f1ea5ef7acf03ba7473af940e22bf 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 56 1.2E-15 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SYN_02076 516f1ea5ef7acf03ba7473af940e22bf 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 2.4E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SYN_02076 516f1ea5ef7acf03ba7473af940e22bf 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 2.4E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SYN_02076 516f1ea5ef7acf03ba7473af940e22bf 191 Pfam PF16295 Tetracycline repressor, C-terminal all-alpha domain 66 190 2.2E-11 T 11-10-2018 IPR032551 HTH-type transcriptional repressor, C-terminal SYN_02076 516f1ea5ef7acf03ba7473af940e22bf 191 SUPERFAMILY SSF46689 4 79 1.9E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SYN_01580 bd393ff0c56dcb418ca087f43cde79f6 402 PRINTS PR00758 Arsenical pump membrane protein signature 264 288 6.6E-10 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SYN_01580 bd393ff0c56dcb418ca087f43cde79f6 402 PRINTS PR00758 Arsenical pump membrane protein signature 374 398 6.6E-10 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SYN_01580 bd393ff0c56dcb418ca087f43cde79f6 402 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 6.6E-10 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SYN_01580 bd393ff0c56dcb418ca087f43cde79f6 402 Pfam PF03600 Citrate transporter 14 341 6.5E-39 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 SYN_00066 1d8a4f1a44b69d922b7eb08c80e6c258 140 Gene3D G3DSA:3.30.1390.10 70 140 5.3E-31 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SYN_00066 1d8a4f1a44b69d922b7eb08c80e6c258 140 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 15 140 25.424 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00066 1d8a4f1a44b69d922b7eb08c80e6c258 140 TIGRFAM TIGR00855 L12: ribosomal protein bL12 15 140 3.0E-50 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00066 1d8a4f1a44b69d922b7eb08c80e6c258 140 SUPERFAMILY SSF54736 69 140 1.13E-24 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SYN_00066 1d8a4f1a44b69d922b7eb08c80e6c258 140 Gene3D G3DSA:1.20.5.710 16 69 8.8E-24 T 11-10-2018 SYN_00066 1d8a4f1a44b69d922b7eb08c80e6c258 140 SUPERFAMILY SSF48300 16 75 1.1E-15 T 11-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00066 1d8a4f1a44b69d922b7eb08c80e6c258 140 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 17 64 1.0E-20 T 11-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00066 1d8a4f1a44b69d922b7eb08c80e6c258 140 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 75 140 2.0E-19 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00066 1d8a4f1a44b69d922b7eb08c80e6c258 140 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 74 140 2.0E-30 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01551 12a69822c00e72bf3d01aafe8ede5355 148 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 10 146 3.1E-53 T 11-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 SYN_01551 12a69822c00e72bf3d01aafe8ede5355 148 Gene3D G3DSA:3.30.700.10 34 145 1.5E-35 T 11-10-2018 SYN_01551 12a69822c00e72bf3d01aafe8ede5355 148 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 31 5.5E-11 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site SYN_01551 12a69822c00e72bf3d01aafe8ede5355 148 SUPERFAMILY SSF54523 38 146 2.62E-33 T 11-10-2018 SYN_01551 12a69822c00e72bf3d01aafe8ede5355 148 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 31 1.5E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site SYN_01551 12a69822c00e72bf3d01aafe8ede5355 148 PRINTS PR00813 Bacterial general secretion pathway protein G signature 47 65 5.4E-16 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 SYN_01551 12a69822c00e72bf3d01aafe8ede5355 148 PRINTS PR00813 Bacterial general secretion pathway protein G signature 11 36 5.4E-16 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 SYN_01551 12a69822c00e72bf3d01aafe8ede5355 148 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site SYN_01551 12a69822c00e72bf3d01aafe8ede5355 148 Pfam PF08334 Type II secretion system (T2SS), protein G 34 145 1.0E-39 T 11-10-2018 IPR013545 Type II secretion system protein G SYN_03294 a0cf8877a73fc80f05b87e86781a483e 327 Pfam PF00882 Zinc dependent phospholipase C 6 180 2.6E-18 T 11-10-2018 IPR029002 Phospholipase C/D Reactome: R-HSA-163125 SYN_01455 2a1d949d79c6b5308648c084ba7f4f15 481 Gene3D G3DSA:3.90.1150.10 14 456 3.6E-168 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SYN_01455 2a1d949d79c6b5308648c084ba7f4f15 481 Pfam PF01212 Beta-eliminating lyase 54 427 2.9E-56 T 11-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 SYN_01455 2a1d949d79c6b5308648c084ba7f4f15 481 Gene3D G3DSA:3.40.640.10 66 317 3.6E-168 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SYN_01455 2a1d949d79c6b5308648c084ba7f4f15 481 PIRSF PIRSF001386 7 463 2.2E-175 T 11-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 SYN_01455 2a1d949d79c6b5308648c084ba7f4f15 481 SUPERFAMILY SSF53383 12 460 3.41E-108 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SYN_00073 e9d2f764ea4bb3bce5d54207312f7889 192 SUPERFAMILY SSF143447 3 187 2.35E-63 T 11-10-2018 IPR036071 AMMECR1 domain superfamily SYN_00073 e9d2f764ea4bb3bce5d54207312f7889 192 Gene3D G3DSA:3.30.700.20 9 187 4.6E-63 T 11-10-2018 IPR027485 AMMECR1, N-terminal SYN_00073 e9d2f764ea4bb3bce5d54207312f7889 192 Hamap MF_00645 Protein . 6 182 30.548 T 11-10-2018 IPR023472 Uncharacterised protein family MJ0810 SYN_00073 e9d2f764ea4bb3bce5d54207312f7889 192 TIGRFAM TIGR00296 TIGR00296: uncharacterized protein, PH0010 family 5 189 5.2E-48 T 11-10-2018 IPR023473 AMMECR1 SYN_00073 e9d2f764ea4bb3bce5d54207312f7889 192 Pfam PF01871 AMMECR1 16 183 7.3E-52 T 11-10-2018 IPR002733 AMMECR1 domain SYN_00073 e9d2f764ea4bb3bce5d54207312f7889 192 Gene3D G3DSA:3.30.1490.150 112 180 4.6E-63 T 11-10-2018 SYN_00073 e9d2f764ea4bb3bce5d54207312f7889 192 TIGRFAM TIGR04335 AmmeMemoSam_A: AmmeMemoRadiSam system protein A 12 183 3.3E-57 T 11-10-2018 IPR027623 AmmeMemoRadiSam system protein A SYN_00022 2d6005d3bb9e12e14f6e2a416990f6d2 388 Pfam PF12704 MacB-like periplasmic core domain 19 228 4.2E-11 T 11-10-2018 IPR025857 MacB-like periplasmic core domain SYN_00022 2d6005d3bb9e12e14f6e2a416990f6d2 388 Pfam PF02687 FtsX-like permease family 287 380 3.4E-12 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 SYN_01742 5f5b5cbae28a5b2dd94d219ba8319b2c 475 Pfam PF02875 Mur ligase family, glutamate ligase domain 330 414 5.4E-13 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 SYN_01742 5f5b5cbae28a5b2dd94d219ba8319b2c 475 Pfam PF01225 Mur ligase family, catalytic domain 31 111 3.2E-7 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 SYN_01742 5f5b5cbae28a5b2dd94d219ba8319b2c 475 Pfam PF08245 Mur ligase middle domain 122 308 3.9E-47 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 SYN_01742 5f5b5cbae28a5b2dd94d219ba8319b2c 475 SUPERFAMILY SSF63418 10 113 7.06E-21 T 11-10-2018 IPR035911 MurE/MurF, N-terminal SYN_01742 5f5b5cbae28a5b2dd94d219ba8319b2c 475 Gene3D G3DSA:3.40.1390.10 6 82 7.5E-20 T 11-10-2018 SYN_01742 5f5b5cbae28a5b2dd94d219ba8319b2c 475 SUPERFAMILY SSF53244 330 467 2.62E-32 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 SYN_01742 5f5b5cbae28a5b2dd94d219ba8319b2c 475 Gene3D G3DSA:3.40.1190.10 98 326 1.1E-73 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 SYN_01742 5f5b5cbae28a5b2dd94d219ba8319b2c 475 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 9 470 32.93 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SYN_01742 5f5b5cbae28a5b2dd94d219ba8319b2c 475 SUPERFAMILY SSF53623 117 328 3.27E-54 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 SYN_01742 5f5b5cbae28a5b2dd94d219ba8319b2c 475 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 36 467 2.8E-130 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SYN_01742 5f5b5cbae28a5b2dd94d219ba8319b2c 475 Gene3D G3DSA:3.90.190.20 329 474 8.2E-40 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 SYN_00043 3015ddd835ca6c2f8e91be3976ea6f0e 530 Gene3D G3DSA:3.40.50.300 338 525 1.8E-38 T 11-10-2018 SYN_00043 3015ddd835ca6c2f8e91be3976ea6f0e 530 SUPERFAMILY SSF52540 340 495 1.1E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00043 3015ddd835ca6c2f8e91be3976ea6f0e 530 SUPERFAMILY SSF56112 6 301 4.96E-18 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily SYN_00043 3015ddd835ca6c2f8e91be3976ea6f0e 530 Pfam PF13671 AAA domain 343 492 1.1E-19 T 11-10-2018 SYN_00821 29a6f3fea2cf752a9a6f00307af10c90 332 SUPERFAMILY SSF53448 6 283 8.04E-51 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_00821 29a6f3fea2cf752a9a6f00307af10c90 332 Pfam PF00535 Glycosyl transferase family 2 8 117 7.7E-30 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 SYN_00821 29a6f3fea2cf752a9a6f00307af10c90 332 Gene3D G3DSA:3.90.550.10 3 232 1.2E-46 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_00629 6d83805cfb3b1a3aeeb9532d404b9757 527 SUPERFAMILY SSF53706 1 418 3.4E-135 T 11-10-2018 SYN_00629 6d83805cfb3b1a3aeeb9532d404b9757 527 Gene3D G3DSA:2.40.40.20 406 527 6.0E-43 T 11-10-2018 SYN_00629 6d83805cfb3b1a3aeeb9532d404b9757 527 Pfam PF00384 Molybdopterin oxidoreductase 2 332 5.6E-67 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00629 6d83805cfb3b1a3aeeb9532d404b9757 527 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 454 481 - T 11-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 SYN_00629 6d83805cfb3b1a3aeeb9532d404b9757 527 Gene3D G3DSA:3.40.50.740 185 374 3.8E-141 T 11-10-2018 SYN_00629 6d83805cfb3b1a3aeeb9532d404b9757 527 SUPERFAMILY SSF50692 371 526 3.94E-47 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily SYN_00629 6d83805cfb3b1a3aeeb9532d404b9757 527 Pfam PF01568 Molydopterin dinucleotide binding domain 416 521 1.6E-29 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 SYN_00629 6d83805cfb3b1a3aeeb9532d404b9757 527 Gene3D G3DSA:3.40.228.10 1 184 3.8E-141 T 11-10-2018 SYN_02743 b7c550c13949a83f56618833cbbbaee5 321 PIRSF PIRSF016838 4 314 9.0E-14 T 11-10-2018 IPR028349 Protein PafC SYN_02743 b7c550c13949a83f56618833cbbbaee5 321 SUPERFAMILY SSF46785 13 65 1.26E-5 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_02743 b7c550c13949a83f56618833cbbbaee5 321 Pfam PF13280 WYL domain 134 305 1.2E-33 T 11-10-2018 IPR026881 WYL domain SYN_02743 b7c550c13949a83f56618833cbbbaee5 321 Gene3D G3DSA:1.10.10.10 2 68 1.6E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_02743 b7c550c13949a83f56618833cbbbaee5 321 Pfam PF08279 HTH domain 13 62 5.0E-6 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 SYN_00566 03bf4c32909efce4325a24659fb1601b 531 Gene3D G3DSA:3.30.450.20 375 506 4.2E-23 T 11-10-2018 SYN_00566 03bf4c32909efce4325a24659fb1601b 531 Pfam PF13185 GAF domain 225 363 3.1E-14 T 11-10-2018 IPR003018 GAF domain GO:0005515 SYN_00566 03bf4c32909efce4325a24659fb1601b 531 SMART SM00086 449 490 0.0023 T 11-10-2018 IPR001610 PAC motif SYN_00566 03bf4c32909efce4325a24659fb1601b 531 SMART SM00086 162 204 2.9E-8 T 11-10-2018 IPR001610 PAC motif SYN_00566 03bf4c32909efce4325a24659fb1601b 531 SMART SM00091 376 443 2.0E-7 T 11-10-2018 IPR000014 PAS domain SYN_00566 03bf4c32909efce4325a24659fb1601b 531 SMART SM00091 89 155 1.8E-5 T 11-10-2018 IPR000014 PAS domain SYN_00566 03bf4c32909efce4325a24659fb1601b 531 SMART SM00065 226 372 0.0019 T 11-10-2018 IPR003018 GAF domain GO:0005515 SYN_00566 03bf4c32909efce4325a24659fb1601b 531 SUPERFAMILY SSF55785 365 488 2.97E-24 T 11-10-2018 IPR035965 PAS domain superfamily SYN_00566 03bf4c32909efce4325a24659fb1601b 531 SUPERFAMILY SSF55781 226 375 1.11E-17 T 11-10-2018 SYN_00566 03bf4c32909efce4325a24659fb1601b 531 Pfam PF00989 PAS fold 90 201 7.4E-11 T 11-10-2018 IPR013767 PAS fold GO:0006355 SYN_00566 03bf4c32909efce4325a24659fb1601b 531 SUPERFAMILY SSF55785 486 522 5.38E-5 T 11-10-2018 IPR035965 PAS domain superfamily SYN_00566 03bf4c32909efce4325a24659fb1601b 531 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 372 497 1.1E-21 T 11-10-2018 IPR000014 PAS domain SYN_00566 03bf4c32909efce4325a24659fb1601b 531 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 80 209 2.7E-22 T 11-10-2018 IPR000014 PAS domain SYN_00566 03bf4c32909efce4325a24659fb1601b 531 Pfam PF13426 PAS domain 388 489 8.2E-11 T 11-10-2018 IPR000014 PAS domain SYN_00566 03bf4c32909efce4325a24659fb1601b 531 Gene3D G3DSA:3.30.450.20 73 206 2.8E-20 T 11-10-2018 SYN_00566 03bf4c32909efce4325a24659fb1601b 531 Gene3D G3DSA:3.30.450.40 207 374 1.5E-21 T 11-10-2018 IPR029016 GAF-like domain superfamily SYN_00566 03bf4c32909efce4325a24659fb1601b 531 SUPERFAMILY SSF55785 100 209 1.19E-21 T 11-10-2018 IPR035965 PAS domain superfamily SYN_01536 f624ef472a41e8a91833058e6e73eb2a 292 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 2 288 1.5E-156 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SYN_01536 f624ef472a41e8a91833058e6e73eb2a 292 Gene3D G3DSA:3.30.930.10 1 204 6.6E-111 T 11-10-2018 SYN_01536 f624ef472a41e8a91833058e6e73eb2a 292 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 1 281 60.717 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SYN_01536 f624ef472a41e8a91833058e6e73eb2a 292 Gene3D G3DSA:1.20.58.180 205 285 4.3E-34 T 11-10-2018 SYN_01536 f624ef472a41e8a91833058e6e73eb2a 292 SUPERFAMILY SSF55681 2 280 2.73E-137 T 11-10-2018 SYN_01536 f624ef472a41e8a91833058e6e73eb2a 292 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 76 96 2.1E-65 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SYN_01536 f624ef472a41e8a91833058e6e73eb2a 292 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 133 153 2.1E-65 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SYN_01536 f624ef472a41e8a91833058e6e73eb2a 292 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 241 257 2.1E-65 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SYN_01536 f624ef472a41e8a91833058e6e73eb2a 292 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 55 70 2.1E-65 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SYN_01536 f624ef472a41e8a91833058e6e73eb2a 292 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 107 131 2.1E-65 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SYN_01536 f624ef472a41e8a91833058e6e73eb2a 292 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 156 171 2.1E-65 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SYN_01536 f624ef472a41e8a91833058e6e73eb2a 292 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 3 280 1.0E-153 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SYN_02614 327eb31a6e9f469a5e3ded0b4fae16bc 542 Gene3D G3DSA:1.20.1270.20 1 135 1.4E-45 T 11-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 SYN_02614 327eb31a6e9f469a5e3ded0b4fae16bc 542 Gene3D G3DSA:1.20.1270.20 144 226 1.3E-31 T 11-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 SYN_02614 327eb31a6e9f469a5e3ded0b4fae16bc 542 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 541 6.1E-231 T 11-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 SYN_02614 327eb31a6e9f469a5e3ded0b4fae16bc 542 Pfam PF03063 Prismane/CO dehydrogenase family 1 538 1.3E-170 T 11-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 SYN_02614 327eb31a6e9f469a5e3ded0b4fae16bc 542 SUPERFAMILY SSF56821 1 541 1.7E-196 T 11-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 SYN_02614 327eb31a6e9f469a5e3ded0b4fae16bc 542 Gene3D G3DSA:3.40.50.2030 228 372 4.3E-66 T 11-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 SYN_02614 327eb31a6e9f469a5e3ded0b4fae16bc 542 PIRSF PIRSF000076 1 542 8.3E-229 T 11-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 SYN_02614 327eb31a6e9f469a5e3ded0b4fae16bc 542 Gene3D G3DSA:3.40.50.2030 373 541 4.1E-65 T 11-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 SYN_02614 327eb31a6e9f469a5e3ded0b4fae16bc 542 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 542 21.002 T 11-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 SYN_01678 fdec6fa581d6318ee38071f9d0984f02 151 Gene3D G3DSA:3.40.630.30 5 149 2.8E-18 T 11-10-2018 SYN_01678 fdec6fa581d6318ee38071f9d0984f02 151 SUPERFAMILY SSF55729 4 135 8.7E-19 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase SYN_01678 fdec6fa581d6318ee38071f9d0984f02 151 Pfam PF00583 Acetyltransferase (GNAT) family 18 124 6.1E-10 T 11-10-2018 IPR000182 GNAT domain SYN_00877 2e58151cdfb8a2b7d03b0b72d117c7f9 511 SUPERFAMILY SSF53756 39 504 2.02E-28 T 11-10-2018 SYN_00877 2e58151cdfb8a2b7d03b0b72d117c7f9 511 Pfam PF08323 Starch synthase catalytic domain 39 234 1.8E-16 T 11-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 SYN_00877 2e58151cdfb8a2b7d03b0b72d117c7f9 511 Gene3D G3DSA:3.40.50.2000 39 501 1.1E-45 T 11-10-2018 SYN_00877 2e58151cdfb8a2b7d03b0b72d117c7f9 511 Gene3D G3DSA:3.40.50.2000 265 486 1.1E-45 T 11-10-2018 SYN_02356 f343b41467f01b3306d25ab694f5392d 194 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 83 186 2.2E-23 T 11-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 SYN_02356 f343b41467f01b3306d25ab694f5392d 194 Gene3D G3DSA:3.30.750.24 82 193 3.3E-30 T 11-10-2018 IPR036513 STAS domain superfamily SYN_02356 f343b41467f01b3306d25ab694f5392d 194 SUPERFAMILY SSF52091 84 191 1.79E-26 T 11-10-2018 IPR036513 STAS domain superfamily SYN_02356 f343b41467f01b3306d25ab694f5392d 194 Pfam PF01740 STAS domain 90 189 2.0E-17 T 11-10-2018 IPR002645 STAS domain SYN_01126 0d4f73c6ce37a240a627dc2e186abbba 1071 SMART SM00089 794 884 0.26 T 11-10-2018 IPR022409 PKD/Chitinase domain SYN_01126 0d4f73c6ce37a240a627dc2e186abbba 1071 SMART SM00089 315 405 0.1 T 11-10-2018 IPR022409 PKD/Chitinase domain SYN_01126 0d4f73c6ce37a240a627dc2e186abbba 1071 SMART SM00089 413 503 0.01 T 11-10-2018 IPR022409 PKD/Chitinase domain SYN_01126 0d4f73c6ce37a240a627dc2e186abbba 1071 SMART SM00089 696 786 0.084 T 11-10-2018 IPR022409 PKD/Chitinase domain SYN_01126 0d4f73c6ce37a240a627dc2e186abbba 1071 SUPERFAMILY SSF49299 409 501 2.75E-8 T 11-10-2018 IPR035986 PKD domain superfamily SYN_01126 0d4f73c6ce37a240a627dc2e186abbba 1071 SUPERFAMILY SSF49299 311 403 1.61E-6 T 11-10-2018 IPR035986 PKD domain superfamily SYN_01126 0d4f73c6ce37a240a627dc2e186abbba 1071 SUPERFAMILY SSF49299 790 882 4.71E-7 T 11-10-2018 IPR035986 PKD domain superfamily SYN_01126 0d4f73c6ce37a240a627dc2e186abbba 1071 SUPERFAMILY SSF63825 46 248 7.19E-15 T 11-10-2018 SYN_01126 0d4f73c6ce37a240a627dc2e186abbba 1071 SUPERFAMILY SSF49299 692 784 3.66E-7 T 11-10-2018 IPR035986 PKD domain superfamily SYN_01126 0d4f73c6ce37a240a627dc2e186abbba 1071 Gene3D G3DSA:2.120.10.30 50 287 1.8E-7 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like SYN_01126 0d4f73c6ce37a240a627dc2e186abbba 1071 Gene3D G3DSA:2.60.40.10 791 886 4.6E-22 T 11-10-2018 IPR013783 Immunoglobulin-like fold SYN_01126 0d4f73c6ce37a240a627dc2e186abbba 1071 Gene3D G3DSA:2.60.40.10 693 790 3.6E-20 T 11-10-2018 IPR013783 Immunoglobulin-like fold SYN_01126 0d4f73c6ce37a240a627dc2e186abbba 1071 Gene3D G3DSA:2.60.40.10 312 409 7.2E-21 T 11-10-2018 IPR013783 Immunoglobulin-like fold SYN_01126 0d4f73c6ce37a240a627dc2e186abbba 1071 Gene3D G3DSA:2.60.40.10 410 505 2.9E-22 T 11-10-2018 IPR013783 Immunoglobulin-like fold SYN_01257 cdfb2dbd0de8f79cf27fb7767dac2164 318 Gene3D G3DSA:2.160.10.10 200 312 8.1E-31 T 11-10-2018 SYN_01257 cdfb2dbd0de8f79cf27fb7767dac2164 318 Gene3D G3DSA:1.10.3130.10 45 199 1.3E-48 T 11-10-2018 SYN_01257 cdfb2dbd0de8f79cf27fb7767dac2164 318 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 259 291 1.2E-5 T 11-10-2018 IPR001451 Hexapeptide repeat SYN_01257 cdfb2dbd0de8f79cf27fb7767dac2164 318 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 207 240 0.0018 T 11-10-2018 IPR001451 Hexapeptide repeat SYN_01257 cdfb2dbd0de8f79cf27fb7767dac2164 318 SUPERFAMILY SSF51161 110 300 7.33E-43 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily SYN_01257 cdfb2dbd0de8f79cf27fb7767dac2164 318 PIRSF PIRSF000441 132 305 2.1E-48 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 SYN_00829 b91a283eab9a6904ecd12d1d0766bf1c 308 Pfam PF00535 Glycosyl transferase family 2 10 165 1.7E-21 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 SYN_00829 b91a283eab9a6904ecd12d1d0766bf1c 308 Gene3D G3DSA:3.90.550.10 2 228 2.2E-41 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_00829 b91a283eab9a6904ecd12d1d0766bf1c 308 SUPERFAMILY SSF53448 6 242 3.1E-35 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_01286 b155f1932ea636909ff7318f94b1212a 190 Gene3D G3DSA:3.40.390.10 18 188 9.2E-51 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 SYN_01286 b155f1932ea636909ff7318f94b1212a 190 SUPERFAMILY SSF55486 40 184 2.78E-14 T 11-10-2018 SYN_01286 b155f1932ea636909ff7318f94b1212a 190 Hamap MF_01842 Archaemetzincin [amzA]. 15 186 32.473 T 11-10-2018 IPR012091 Peptidase M54, archaemetzincin, archaeal/bacterial GO:0006508|GO:0008237|GO:0008270 SYN_01286 b155f1932ea636909ff7318f94b1212a 190 Pfam PF07998 Peptidase family M54 60 186 1.2E-25 T 11-10-2018 IPR012962 Peptidase M54, archaemetzincin GO:0008270 SYN_01286 b155f1932ea636909ff7318f94b1212a 190 PIRSF PIRSF005785 13 189 4.5E-52 T 11-10-2018 IPR012091 Peptidase M54, archaemetzincin, archaeal/bacterial GO:0006508|GO:0008237|GO:0008270 SYN_00874 b26aa9813ab73806842a02931fce075c 386 SUPERFAMILY SSF56281 126 349 2.8E-32 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_00874 b26aa9813ab73806842a02931fce075c 386 Pfam PF12706 Beta-lactamase superfamily domain 145 333 4.4E-35 T 11-10-2018 IPR001279 Metallo-beta-lactamase SYN_00874 b26aa9813ab73806842a02931fce075c 386 Gene3D G3DSA:3.60.15.10 121 386 7.6E-70 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_00785 91acd2833370a045a8b83f602abc5400 235 PIRSF PIRSF039137 1 235 4.2E-109 T 11-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 SYN_00785 91acd2833370a045a8b83f602abc5400 235 Pfam PF00005 ABC transporter 17 162 2.1E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_00785 91acd2833370a045a8b83f602abc5400 235 Gene3D G3DSA:3.40.50.300 1 235 1.8E-65 T 11-10-2018 SYN_00785 91acd2833370a045a8b83f602abc5400 235 SMART SM00382 26 214 1.0E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00785 91acd2833370a045a8b83f602abc5400 235 SUPERFAMILY SSF52540 2 233 3.2E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00785 91acd2833370a045a8b83f602abc5400 235 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_02675 cac36a38a47375b9a39b277da5832d17 579 SMART SM00984 425 548 1.7E-30 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 SYN_02675 cac36a38a47375b9a39b277da5832d17 579 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 425 547 1.1E-18 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 SYN_02675 cac36a38a47375b9a39b277da5832d17 579 SUPERFAMILY SSF52413 414 551 3.4E-17 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 SYN_02675 cac36a38a47375b9a39b277da5832d17 579 Gene3D G3DSA:3.40.50.720 304 573 1.5E-49 T 11-10-2018 SYN_02675 cac36a38a47375b9a39b277da5832d17 579 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 77 279 1.9E-10 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 SYN_02675 cac36a38a47375b9a39b277da5832d17 579 SUPERFAMILY SSF51735 77 288 3.68E-12 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_02675 cac36a38a47375b9a39b277da5832d17 579 SUPERFAMILY SSF48179 303 399 9.35E-19 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 SYN_02675 cac36a38a47375b9a39b277da5832d17 579 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 304 378 5.7E-15 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 SYN_02675 cac36a38a47375b9a39b277da5832d17 579 Gene3D G3DSA:3.40.50.720 57 296 6.6E-50 T 11-10-2018 SYN_02591 a816bb005ab2687f5705fe533b268815 245 Gene3D G3DSA:3.20.20.70 2 244 4.0E-65 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_02591 a816bb005ab2687f5705fe533b268815 245 Pfam PF00218 Indole-3-glycerol phosphate synthase 17 238 3.3E-49 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 SYN_02591 a816bb005ab2687f5705fe533b268815 245 SUPERFAMILY SSF51366 23 240 2.35E-51 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 SYN_00039 50a4d0980d44937a09e1795417709984 362 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 2 362 45.011 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 SYN_00039 50a4d0980d44937a09e1795417709984 362 Pfam PF02547 Queuosine biosynthesis protein 4 361 3.7E-125 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 SYN_00039 50a4d0980d44937a09e1795417709984 362 Gene3D G3DSA:2.40.10.240 65 187 1.9E-112 T 11-10-2018 SYN_00039 50a4d0980d44937a09e1795417709984 362 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 2 362 4.7E-112 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 SYN_00039 50a4d0980d44937a09e1795417709984 362 SUPERFAMILY SSF111337 2 362 2.22E-120 T 11-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 SYN_00039 50a4d0980d44937a09e1795417709984 362 Gene3D G3DSA:3.40.1780.10 16 361 1.9E-112 T 11-10-2018 SYN_01277 17b5cf0662be8da24d1b0b17b0029be0 177 Pfam PF14385 Domain of unknown function (DUF4416) 9 168 5.9E-62 T 11-10-2018 IPR025529 Protein of unknown function DUF4416 SYN_03476 26136f02c75f1cb23816b404d11d458e 135 Gene3D G3DSA:3.40.50.720 10 130 1.2E-9 T 11-10-2018 SYN_02506 1f59331aa79406a95cd2b3d07ae9b210 171 SUPERFAMILY SSF117070 28 171 9.42E-23 T 11-10-2018 SYN_02506 1f59331aa79406a95cd2b3d07ae9b210 171 Pfam PF03168 Late embryogenesis abundant protein 73 168 7.5E-15 T 11-10-2018 IPR004864 Late embryogenesis abundant protein, LEA_2 subgroup SYN_02506 1f59331aa79406a95cd2b3d07ae9b210 171 SMART SM00769 52 169 6.6E-14 T 11-10-2018 IPR013990 Water stress and hypersensitive response domain GO:0009269 SYN_02506 1f59331aa79406a95cd2b3d07ae9b210 171 Gene3D G3DSA:2.60.40.1820 36 171 7.2E-12 T 11-10-2018 SYN_00879 7151fb69c9ba59fb713fd7e3feae398a 1418 TIGRFAM TIGR02094 more_P_ylases: alpha-glucan phosphorylases 672 1274 1.1E-249 T 11-10-2018 IPR011834 Alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 SYN_00879 7151fb69c9ba59fb713fd7e3feae398a 1418 Gene3D G3DSA:3.40.50.2000 259 516 3.5E-205 T 11-10-2018 SYN_00879 7151fb69c9ba59fb713fd7e3feae398a 1418 Pfam PF11897 Protein of unknown function (DUF3417) 574 685 6.7E-35 T 11-10-2018 IPR024517 Glycogen phosphorylase, domain of unknown function DUF3417 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 SYN_00879 7151fb69c9ba59fb713fd7e3feae398a 1418 SUPERFAMILY SSF53756 17 462 6.6E-24 T 11-10-2018 SYN_00879 7151fb69c9ba59fb713fd7e3feae398a 1418 Gene3D G3DSA:3.40.50.2000 8 531 3.5E-205 T 11-10-2018 SYN_00879 7151fb69c9ba59fb713fd7e3feae398a 1418 Pfam PF05693 Glycogen synthase 361 542 4.7E-35 T 11-10-2018 IPR008631 Glycogen synthase GO:0004373|GO:0005978 KEGG: 00500+2.4.1.11|MetaCyc: PWY-5067|Reactome: R-HSA-3322077|Reactome: R-HSA-3785653 SYN_00879 7151fb69c9ba59fb713fd7e3feae398a 1418 Pfam PF05693 Glycogen synthase 11 340 4.9E-65 T 11-10-2018 IPR008631 Glycogen synthase GO:0004373|GO:0005978 KEGG: 00500+2.4.1.11|MetaCyc: PWY-5067|Reactome: R-HSA-3322077|Reactome: R-HSA-3785653 SYN_00879 7151fb69c9ba59fb713fd7e3feae398a 1418 SUPERFAMILY SSF53756 558 1299 3.49E-210 T 11-10-2018 SYN_00879 7151fb69c9ba59fb713fd7e3feae398a 1418 Gene3D G3DSA:3.40.50.2000 795 982 8.9E-14 T 11-10-2018 SYN_00879 7151fb69c9ba59fb713fd7e3feae398a 1418 Gene3D G3DSA:3.40.50.2000 679 772 1.2E-11 T 11-10-2018 SYN_00879 7151fb69c9ba59fb713fd7e3feae398a 1418 Pfam PF00343 Carbohydrate phosphorylase 689 757 1.4E-4 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 SYN_00879 7151fb69c9ba59fb713fd7e3feae398a 1418 Pfam PF00343 Carbohydrate phosphorylase 799 1184 4.6E-22 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 SYN_00879 7151fb69c9ba59fb713fd7e3feae398a 1418 Gene3D G3DSA:3.40.50.2000 983 1218 2.4E-40 T 11-10-2018 SYN_01383 ef9015cd58bb2e10412c37e378655b3f 64 Pfam PF00301 Rubredoxin 3 49 7.7E-24 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 SYN_01383 ef9015cd58bb2e10412c37e378655b3f 64 SUPERFAMILY SSF57802 1 54 5.55E-22 T 11-10-2018 SYN_01383 ef9015cd58bb2e10412c37e378655b3f 64 PIRSF PIRSF000071 1 63 1.1E-32 T 11-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 SYN_01383 ef9015cd58bb2e10412c37e378655b3f 64 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 11-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 SYN_01383 ef9015cd58bb2e10412c37e378655b3f 64 Gene3D G3DSA:2.20.28.10 1 54 5.7E-26 T 11-10-2018 SYN_01383 ef9015cd58bb2e10412c37e378655b3f 64 PRINTS PR00163 Rubredoxin signature 33 49 3.7E-11 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 SYN_01383 ef9015cd58bb2e10412c37e378655b3f 64 PRINTS PR00163 Rubredoxin signature 3 19 3.7E-11 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 SYN_02434 3d01526feb8a5fd3d4b2c13e6b706ce1 332 PRINTS PR00111 Alpha/beta hydrolase fold signature 102 117 1.1E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 SYN_02434 3d01526feb8a5fd3d4b2c13e6b706ce1 332 PRINTS PR00111 Alpha/beta hydrolase fold signature 145 158 1.1E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 SYN_02434 3d01526feb8a5fd3d4b2c13e6b706ce1 332 PRINTS PR00111 Alpha/beta hydrolase fold signature 159 172 1.1E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 SYN_02434 3d01526feb8a5fd3d4b2c13e6b706ce1 332 SUPERFAMILY SSF53474 57 328 2.43E-47 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold SYN_02434 3d01526feb8a5fd3d4b2c13e6b706ce1 332 Gene3D G3DSA:3.40.50.1820 50 329 2.7E-47 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold SYN_02434 3d01526feb8a5fd3d4b2c13e6b706ce1 332 Pfam PF12697 Alpha/beta hydrolase family 79 188 9.9E-18 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 SYN_02430 89298882c0b0c5fe3c44c8d68af03c07 423 Gene3D G3DSA:3.40.50.300 210 369 5.1E-49 T 11-10-2018 SYN_02430 89298882c0b0c5fe3c44c8d68af03c07 423 Pfam PF00270 DEAD/DEAH box helicase 25 190 3.4E-50 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SYN_02430 89298882c0b0c5fe3c44c8d68af03c07 423 Gene3D G3DSA:3.40.50.300 1 207 7.7E-79 T 11-10-2018 SYN_02430 89298882c0b0c5fe3c44c8d68af03c07 423 SUPERFAMILY SSF52540 22 94 1.27E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02430 89298882c0b0c5fe3c44c8d68af03c07 423 SUPERFAMILY SSF52540 71 351 2.02E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02430 89298882c0b0c5fe3c44c8d68af03c07 423 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 149 157 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SYN_02430 89298882c0b0c5fe3c44c8d68af03c07 423 SMART SM00487 20 224 4.9E-62 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain SYN_02430 89298882c0b0c5fe3c44c8d68af03c07 423 SMART SM00490 253 334 1.2E-31 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_02430 89298882c0b0c5fe3c44c8d68af03c07 423 Pfam PF00271 Helicase conserved C-terminal domain 226 333 7.9E-31 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_00017 b78702a27f31fb7e3e9d5f67572975dd 1193 Gene3D G3DSA:3.40.50.300 440 659 3.7E-40 T 11-10-2018 SYN_00017 b78702a27f31fb7e3e9d5f67572975dd 1193 SUPERFAMILY SSF52540 87 292 1.64E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00017 b78702a27f31fb7e3e9d5f67572975dd 1193 SMART SM00487 101 303 9.4E-22 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain SYN_00017 b78702a27f31fb7e3e9d5f67572975dd 1193 Pfam PF13020 Domain of unknown function (DUF3883) 1077 1162 3.3E-15 T 11-10-2018 IPR024975 Domain of unknown function DUF3883 SYN_00017 b78702a27f31fb7e3e9d5f67572975dd 1193 Pfam PF00271 Helicase conserved C-terminal domain 530 629 1.5E-20 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_00017 b78702a27f31fb7e3e9d5f67572975dd 1193 Gene3D G3DSA:3.40.50.10810 102 429 1.8E-59 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily SYN_00017 b78702a27f31fb7e3e9d5f67572975dd 1193 SMART SM00490 544 629 8.4E-24 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_00017 b78702a27f31fb7e3e9d5f67572975dd 1193 Pfam PF00176 SNF2 family N-terminal domain 126 360 1.0E-16 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 SYN_00017 b78702a27f31fb7e3e9d5f67572975dd 1193 SUPERFAMILY SSF52540 225 669 1.16E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00824 0870bdd1f7911a295c298ef141bd8ec6 428 SUPERFAMILY SSF52540 60 254 6.77E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00824 0870bdd1f7911a295c298ef141bd8ec6 428 Pfam PF14524 Wzt C-terminal domain 279 398 1.7E-11 T 11-10-2018 IPR029439 Wzt, C-terminal SYN_00824 0870bdd1f7911a295c298ef141bd8ec6 428 Pfam PF00005 ABC transporter 65 196 2.2E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_00824 0870bdd1f7911a295c298ef141bd8ec6 428 Gene3D G3DSA:3.40.50.300 53 261 1.0E-43 T 11-10-2018 SYN_00824 0870bdd1f7911a295c298ef141bd8ec6 428 SMART SM00382 74 245 4.0E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_02917 3c98e0cec260243980ddabc2646beb8b 466 Pfam PF01266 FAD dependent oxidoreductase 17 278 6.9E-9 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SYN_02917 3c98e0cec260243980ddabc2646beb8b 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 412 434 1.5E-6 T 11-10-2018 SYN_02917 3c98e0cec260243980ddabc2646beb8b 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 17 36 1.5E-6 T 11-10-2018 SYN_02917 3c98e0cec260243980ddabc2646beb8b 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 299 320 1.9E-7 T 11-10-2018 SYN_02917 3c98e0cec260243980ddabc2646beb8b 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 16 38 1.9E-7 T 11-10-2018 SYN_02917 3c98e0cec260243980ddabc2646beb8b 466 SUPERFAMILY SSF51905 12 459 5.19E-34 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_02917 3c98e0cec260243980ddabc2646beb8b 466 Gene3D G3DSA:3.50.50.60 126 223 3.1E-8 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_02917 3c98e0cec260243980ddabc2646beb8b 466 Gene3D G3DSA:3.50.50.60 6 104 1.8E-19 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_02917 3c98e0cec260243980ddabc2646beb8b 466 PIRSF PIRSF038984 130 462 1.7E-25 T 11-10-2018 IPR028348 FAD dependent protein SYN_02917 3c98e0cec260243980ddabc2646beb8b 466 PIRSF PIRSF038984 3 104 5.9E-15 T 11-10-2018 IPR028348 FAD dependent protein SYN_01300 48ddf265a586138b0cba8d9c1260ea14 279 Gene3D G3DSA:3.20.20.70 14 269 4.7E-99 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_01300 48ddf265a586138b0cba8d9c1260ea14 279 Pfam PF00793 DAHP synthetase I family 30 268 5.4E-73 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 SYN_01300 48ddf265a586138b0cba8d9c1260ea14 279 SUPERFAMILY SSF51569 11 272 1.47E-96 T 11-10-2018 SYN_01300 48ddf265a586138b0cba8d9c1260ea14 279 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 17 265 3.2E-116 T 11-10-2018 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 SYN_00704 1f196a61bb7b71668b63b1709019a1cd 106 SUPERFAMILY SSF51182 6 95 2.95E-5 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily SYN_00704 1f196a61bb7b71668b63b1709019a1cd 106 Gene3D G3DSA:2.60.120.10 7 100 2.0E-19 T 11-10-2018 IPR014710 RmlC-like jelly roll fold SYN_01904 10046375c553408dd226b3e501281311 373 Gene3D G3DSA:1.10.8.60 278 370 2.2E-10 T 11-10-2018 SYN_01904 10046375c553408dd226b3e501281311 373 SUPERFAMILY SSF52540 108 363 2.44E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01904 10046375c553408dd226b3e501281311 373 Gene3D G3DSA:3.40.50.300 102 275 5.3E-36 T 11-10-2018 SYN_01904 10046375c553408dd226b3e501281311 373 Pfam PF13224 Domain of unknown function (DUF4032) 45 79 1.7E-5 T 11-10-2018 IPR025111 Domain of unknown function DUF4032 SYN_01904 10046375c553408dd226b3e501281311 373 SMART SM00382 142 278 8.9E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01904 10046375c553408dd226b3e501281311 373 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 146 274 1.0E-25 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 SYN_02919 c88942fb822787d843d944e552389b91 440 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 106 186 7.9E-28 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 SYN_02919 c88942fb822787d843d944e552389b91 440 Pfam PF13649 Methyltransferase domain 264 362 3.8E-16 T 11-10-2018 SYN_02919 c88942fb822787d843d944e552389b91 440 SUPERFAMILY SSF53335 228 419 1.18E-28 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_02919 c88942fb822787d843d944e552389b91 440 Gene3D G3DSA:3.40.50.150 229 427 5.7E-26 T 11-10-2018 SYN_02919 c88942fb822787d843d944e552389b91 440 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 105 184 3.8E-27 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 SYN_02919 c88942fb822787d843d944e552389b91 440 SUPERFAMILY SSF46767 105 187 8.11E-27 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 SYN_02919 c88942fb822787d843d944e552389b91 440 Gene3D G3DSA:1.10.10.10 103 186 1.6E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_02585 37fe4acdeaff1d556d76ce07d47d31ae 555 Gene3D G3DSA:3.40.50.300 230 413 9.6E-68 T 11-10-2018 SYN_02585 37fe4acdeaff1d556d76ce07d47d31ae 555 SUPERFAMILY SSF46689 455 546 5.38E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SYN_02585 37fe4acdeaff1d556d76ce07d47d31ae 555 SUPERFAMILY SSF52540 242 487 9.45E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02585 37fe4acdeaff1d556d76ce07d47d31ae 555 Pfam PF00158 Sigma-54 interaction domain 243 410 1.6E-67 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SYN_02585 37fe4acdeaff1d556d76ce07d47d31ae 555 Pfam PF02954 Bacterial regulatory protein, Fis family 504 543 1.7E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_02585 37fe4acdeaff1d556d76ce07d47d31ae 555 SUPERFAMILY SSF55785 104 198 3.81E-7 T 11-10-2018 IPR035965 PAS domain superfamily SYN_02585 37fe4acdeaff1d556d76ce07d47d31ae 555 SMART SM00382 262 406 1.9E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_02585 37fe4acdeaff1d556d76ce07d47d31ae 555 Gene3D G3DSA:1.10.10.60 481 547 2.0E-17 T 11-10-2018 SYN_02585 37fe4acdeaff1d556d76ce07d47d31ae 555 Gene3D G3DSA:1.10.8.60 414 480 4.8E-21 T 11-10-2018 SYN_02585 37fe4acdeaff1d556d76ce07d47d31ae 555 Gene3D G3DSA:3.30.450.20 108 209 4.0E-7 T 11-10-2018 SYN_02585 37fe4acdeaff1d556d76ce07d47d31ae 555 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 510 527 1.7E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_02585 37fe4acdeaff1d556d76ce07d47d31ae 555 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 527 547 1.7E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_02585 37fe4acdeaff1d556d76ce07d47d31ae 555 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 266 279 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SYN_03172 15e12a7a7267329fbc3ba59a79c0488b 138 Pfam PF13276 HTH-like domain 35 90 1.5E-13 T 11-10-2018 IPR025948 HTH-like domain SYN_03172 15e12a7a7267329fbc3ba59a79c0488b 138 SUPERFAMILY SSF53098 104 138 3.98E-5 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily SYN_00598 15292d04d8328403e52ad1b154e095c3 368 PIRSF PIRSF005622 1 367 3.8E-151 T 11-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 SYN_00598 15292d04d8328403e52ad1b154e095c3 368 Pfam PF01924 Hydrogenase formation hypA family 12 362 3.7E-147 T 11-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 SYN_00598 15292d04d8328403e52ad1b154e095c3 368 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 2 363 9.2E-140 T 11-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 SYN_00598 15292d04d8328403e52ad1b154e095c3 368 Gene3D G3DSA:1.10.10.2140 314 364 1.6E-25 T 11-10-2018 SYN_00598 15292d04d8328403e52ad1b154e095c3 368 Gene3D G3DSA:3.40.50.11750 19 259 2.3E-110 T 11-10-2018 SYN_00598 15292d04d8328403e52ad1b154e095c3 368 Gene3D G3DSA:3.40.50.11740 62 299 2.3E-110 T 11-10-2018 SYN_00641 dff362f5399ccb1fc64157b05d5bad9c 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00641 dff362f5399ccb1fc64157b05d5bad9c 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 66 145 5.3E-26 T 11-10-2018 IPR020069 Ribosomal protein L9, C-terminal SYN_00641 dff362f5399ccb1fc64157b05d5bad9c 149 Gene3D G3DSA:3.10.430.100 62 148 4.8E-28 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily SYN_00641 dff362f5399ccb1fc64157b05d5bad9c 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 147 24.35 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_00641 dff362f5399ccb1fc64157b05d5bad9c 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 1.2E-42 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_00641 dff362f5399ccb1fc64157b05d5bad9c 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 4.6E-21 T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00641 dff362f5399ccb1fc64157b05d5bad9c 149 SUPERFAMILY SSF55653 57 147 1.31E-24 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily SYN_00641 dff362f5399ccb1fc64157b05d5bad9c 149 Gene3D G3DSA:3.40.5.10 1 61 1.6E-22 T 11-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00641 dff362f5399ccb1fc64157b05d5bad9c 149 SUPERFAMILY SSF55658 1 54 4.01E-16 T 11-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal SYN_00492 09f38ac5a36da287de026503f034020a 264 Pfam PF06067 Domain of unknown function (DUF932) 47 218 6.8E-7 T 11-10-2018 IPR026325 Protein of unknown function DUF932 SYN_01289 dedef4980bf28e1c079ec0f645f2fd0c 58 Pfam PF00403 Heavy-metal-associated domain 1 55 7.0E-13 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SYN_01289 dedef4980bf28e1c079ec0f645f2fd0c 58 SUPERFAMILY SSF55008 1 57 3.53E-15 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 SYN_01289 dedef4980bf28e1c079ec0f645f2fd0c 58 Gene3D G3DSA:3.30.70.100 1 57 1.3E-17 T 11-10-2018 SYN_00259 fab49f27fdbbc6320181c920dbea73fc 385 Pfam PF13183 4Fe-4S dicluster domain 22 81 1.5E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_00259 fab49f27fdbbc6320181c920dbea73fc 385 Gene3D G3DSA:1.10.1060.10 14 94 2.5E-9 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SYN_00259 fab49f27fdbbc6320181c920dbea73fc 385 SUPERFAMILY SSF46548 11 101 6.8E-14 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SYN_00259 fab49f27fdbbc6320181c920dbea73fc 385 Pfam PF02754 Cysteine-rich domain 147 232 1.4E-16 T 11-10-2018 IPR004017 Cysteine-rich domain SYN_00259 fab49f27fdbbc6320181c920dbea73fc 385 Pfam PF02754 Cysteine-rich domain 272 359 5.1E-18 T 11-10-2018 IPR004017 Cysteine-rich domain SYN_02421 fab49f27fdbbc6320181c920dbea73fc 385 Pfam PF13183 4Fe-4S dicluster domain 22 81 1.5E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_02421 fab49f27fdbbc6320181c920dbea73fc 385 Gene3D G3DSA:1.10.1060.10 14 94 2.5E-9 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SYN_02421 fab49f27fdbbc6320181c920dbea73fc 385 SUPERFAMILY SSF46548 11 101 6.8E-14 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SYN_02421 fab49f27fdbbc6320181c920dbea73fc 385 Pfam PF02754 Cysteine-rich domain 147 232 1.4E-16 T 11-10-2018 IPR004017 Cysteine-rich domain SYN_02421 fab49f27fdbbc6320181c920dbea73fc 385 Pfam PF02754 Cysteine-rich domain 272 359 5.1E-18 T 11-10-2018 IPR004017 Cysteine-rich domain SYN_03213 fab49f27fdbbc6320181c920dbea73fc 385 Pfam PF13183 4Fe-4S dicluster domain 22 81 1.5E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_03213 fab49f27fdbbc6320181c920dbea73fc 385 Gene3D G3DSA:1.10.1060.10 14 94 2.5E-9 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SYN_03213 fab49f27fdbbc6320181c920dbea73fc 385 SUPERFAMILY SSF46548 11 101 6.8E-14 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SYN_03213 fab49f27fdbbc6320181c920dbea73fc 385 Pfam PF02754 Cysteine-rich domain 147 232 1.4E-16 T 11-10-2018 IPR004017 Cysteine-rich domain SYN_03213 fab49f27fdbbc6320181c920dbea73fc 385 Pfam PF02754 Cysteine-rich domain 272 359 5.1E-18 T 11-10-2018 IPR004017 Cysteine-rich domain SYN_01979 ff07a583f6c5da67a9046302fc922e5c 731 Gene3D G3DSA:3.20.70.20 159 710 6.4E-78 T 11-10-2018 SYN_01979 ff07a583f6c5da67a9046302fc922e5c 731 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 150 723 5.8E-101 T 11-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 SYN_01979 ff07a583f6c5da67a9046302fc922e5c 731 SUPERFAMILY SSF51998 151 711 1.37E-100 T 11-10-2018 SYN_01979 ff07a583f6c5da67a9046302fc922e5c 731 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 151 723 3.9E-112 T 11-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 SYN_00402 9526d6f0f6d7c259e9fca2a82503ee02 460 TIGRFAM TIGR00591 phr2: deoxyribodipyrimidine photolyase 1 443 2.7E-166 T 11-10-2018 IPR008148 DNA photolyase class 2 GO:0003904|GO:0006281 SYN_00402 9526d6f0f6d7c259e9fca2a82503ee02 460 SUPERFAMILY SSF52425 20 190 7.72E-31 T 11-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 SYN_00402 9526d6f0f6d7c259e9fca2a82503ee02 460 Gene3D G3DSA:1.10.579.10 307 453 2.1E-66 T 11-10-2018 SYN_00402 9526d6f0f6d7c259e9fca2a82503ee02 460 Gene3D G3DSA:3.40.50.620 1 141 2.6E-35 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_00402 9526d6f0f6d7c259e9fca2a82503ee02 460 Pfam PF00875 DNA photolyase 21 174 3.4E-17 T 11-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 SYN_00402 9526d6f0f6d7c259e9fca2a82503ee02 460 SUPERFAMILY SSF48173 205 443 3.14E-58 T 11-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 SYN_00402 9526d6f0f6d7c259e9fca2a82503ee02 460 Gene3D G3DSA:1.25.40.80 143 306 8.0E-46 T 11-10-2018 SYN_02762 5cdbfed193e1dc6971d3c9aec54ff229 499 Gene3D G3DSA:2.170.120.30 302 393 1.6E-13 T 11-10-2018 SYN_02762 5cdbfed193e1dc6971d3c9aec54ff229 499 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 121 236 1.1E-33 T 11-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal SYN_02762 5cdbfed193e1dc6971d3c9aec54ff229 499 Hamap MF_01499 Diadenylate cyclase [dacA]. 7 255 24.327 T 11-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 SYN_02762 5cdbfed193e1dc6971d3c9aec54ff229 499 SUPERFAMILY SSF143597 43 238 1.57E-52 T 11-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily SYN_02762 5cdbfed193e1dc6971d3c9aec54ff229 499 Gene3D G3DSA:3.40.1700.10 105 254 1.8E-45 T 11-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily SYN_01854 cc52070043a0676ded775e4c7c5c1889 882 SUPERFAMILY SSF158702 517 731 3.14E-21 T 11-10-2018 SYN_01854 cc52070043a0676ded775e4c7c5c1889 882 Gene3D G3DSA:3.40.50.300 207 420 1.3E-35 T 11-10-2018 SYN_01854 cc52070043a0676ded775e4c7c5c1889 882 SUPERFAMILY SSF52540 39 411 6.28E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01854 cc52070043a0676ded775e4c7c5c1889 882 SMART SM00487 23 219 3.4E-19 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain SYN_01854 cc52070043a0676ded775e4c7c5c1889 882 Pfam PF00271 Helicase conserved C-terminal domain 298 396 2.7E-8 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_01854 cc52070043a0676ded775e4c7c5c1889 882 SUPERFAMILY SSF46785 431 511 1.36E-8 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_01854 cc52070043a0676ded775e4c7c5c1889 882 Gene3D G3DSA:1.10.3380.30 435 675 5.8E-27 T 11-10-2018 SYN_01854 cc52070043a0676ded775e4c7c5c1889 882 Pfam PF00270 DEAD/DEAH box helicase 29 189 1.2E-17 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SYN_01854 cc52070043a0676ded775e4c7c5c1889 882 SMART SM00490 302 396 3.3E-16 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_01854 cc52070043a0676ded775e4c7c5c1889 882 Gene3D G3DSA:3.40.50.300 9 206 6.7E-48 T 11-10-2018 SYN_01178 d12c37b7e3906e1a9098c8b5efc3382b 125 Gene3D G3DSA:3.40.50.2300 2 122 1.2E-11 T 11-10-2018 SYN_01178 d12c37b7e3906e1a9098c8b5efc3382b 125 SUPERFAMILY SSF52172 1 121 9.25E-13 T 11-10-2018 IPR011006 CheY-like superfamily SYN_01178 d12c37b7e3906e1a9098c8b5efc3382b 125 Pfam PF00072 Response regulator receiver domain 6 108 2.2E-8 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_03148 6ef47f407dfd54ec8955fa14acc306d2 411 Gene3D G3DSA:3.90.230.10 153 410 3.3E-54 T 11-10-2018 SYN_03148 6ef47f407dfd54ec8955fa14acc306d2 411 Gene3D G3DSA:3.40.350.10 25 152 6.2E-15 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal SYN_03148 6ef47f407dfd54ec8955fa14acc306d2 411 SUPERFAMILY SSF55920 112 406 1.96E-50 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like SYN_03148 6ef47f407dfd54ec8955fa14acc306d2 411 Pfam PF01321 Creatinase/Prolidase N-terminal domain 30 153 3.8E-16 T 11-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 SYN_03148 6ef47f407dfd54ec8955fa14acc306d2 411 Pfam PF00557 Metallopeptidase family M24 161 394 6.0E-41 T 11-10-2018 IPR000994 Peptidase M24 SYN_03148 6ef47f407dfd54ec8955fa14acc306d2 411 SUPERFAMILY SSF53092 17 152 3.66E-15 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal SYN_01000 53251a682348f42d064ee481dbb0fb7a 218 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 12 212 1.7E-61 T 11-10-2018 SYN_01000 53251a682348f42d064ee481dbb0fb7a 218 SUPERFAMILY SSF53335 2 210 4.71E-47 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_01000 53251a682348f42d064ee481dbb0fb7a 218 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 4 216 40.316 T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SYN_01000 53251a682348f42d064ee481dbb0fb7a 218 Gene3D G3DSA:3.40.50.150 2 218 3.8E-79 T 11-10-2018 SYN_01000 53251a682348f42d064ee481dbb0fb7a 218 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 7 213 1.9E-65 T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SYN_01000 53251a682348f42d064ee481dbb0fb7a 218 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 134 149 - T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 SYN_02358 89fb85aaf76204feddca4adf67b0f3ba 335 Gene3D G3DSA:3.40.190.10 43 289 2.3E-63 T 11-10-2018 SYN_02358 89fb85aaf76204feddca4adf67b0f3ba 335 Gene3D G3DSA:3.40.190.10 119 218 2.3E-63 T 11-10-2018 SYN_02358 89fb85aaf76204feddca4adf67b0f3ba 335 Pfam PF09084 NMT1/THI5 like 48 256 7.0E-45 T 11-10-2018 IPR015168 SsuA/THI5-like SYN_02358 89fb85aaf76204feddca4adf67b0f3ba 335 SUPERFAMILY SSF53850 43 326 5.93E-38 T 11-10-2018 SYN_03823 7acc89ad410906d8e61e7b21a164cdee 63 Gene3D G3DSA:2.60.300.12 1 63 6.2E-6 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 SYN_03823 7acc89ad410906d8e61e7b21a164cdee 63 SUPERFAMILY SSF89360 4 49 1.35E-5 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 SYN_02459 bdbd26a39d53df7654988f084a588f54 466 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 18 461 28.251 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 SYN_02459 bdbd26a39d53df7654988f084a588f54 466 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 22 371 8.9E-126 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 SYN_02459 bdbd26a39d53df7654988f084a588f54 466 Pfam PF02601 Exonuclease VII, large subunit 145 458 1.2E-94 T 11-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 SYN_02459 bdbd26a39d53df7654988f084a588f54 466 Pfam PF13742 OB-fold nucleic acid binding domain 21 121 2.4E-29 T 11-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 SYN_02617 bc21f03b449904b58a19e3d8f08f2023 495 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 83 464 1.4E-99 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 SYN_02617 bc21f03b449904b58a19e3d8f08f2023 495 Pfam PF02386 Cation transport protein 62 474 3.4E-67 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 SYN_02617 bc21f03b449904b58a19e3d8f08f2023 495 PIRSF PIRSF006247 1 481 4.1E-176 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 SYN_03090 ab99080f50461e8782cdce8a8da74ccd 362 TIGRFAM TIGR02707 butyr_kinase: butyrate kinase 7 354 4.4E-130 T 11-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 SYN_03090 ab99080f50461e8782cdce8a8da74ccd 362 SUPERFAMILY SSF53067 122 346 6.95E-50 T 11-10-2018 SYN_03090 ab99080f50461e8782cdce8a8da74ccd 362 PRINTS PR00471 Acetate kinase family signature 298 314 2.8E-17 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SYN_03090 ab99080f50461e8782cdce8a8da74ccd 362 PRINTS PR00471 Acetate kinase family signature 7 18 2.8E-17 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SYN_03090 ab99080f50461e8782cdce8a8da74ccd 362 PRINTS PR00471 Acetate kinase family signature 181 202 2.8E-17 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SYN_03090 ab99080f50461e8782cdce8a8da74ccd 362 PRINTS PR00471 Acetate kinase family signature 275 288 2.8E-17 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SYN_03090 ab99080f50461e8782cdce8a8da74ccd 362 PIRSF PIRSF036458 3 357 2.4E-131 T 11-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 SYN_03090 ab99080f50461e8782cdce8a8da74ccd 362 Pfam PF00871 Acetokinase family 7 311 5.9E-46 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SYN_03090 ab99080f50461e8782cdce8a8da74ccd 362 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 7 18 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SYN_03090 ab99080f50461e8782cdce8a8da74ccd 362 Gene3D G3DSA:3.30.420.40 7 356 3.5E-137 T 11-10-2018 SYN_03090 ab99080f50461e8782cdce8a8da74ccd 362 SUPERFAMILY SSF53067 6 174 6.47E-56 T 11-10-2018 SYN_03090 ab99080f50461e8782cdce8a8da74ccd 362 Hamap MF_00542 Probable butyrate kinase [buk]. 1 362 140.669 T 11-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 SYN_03090 ab99080f50461e8782cdce8a8da74ccd 362 Gene3D G3DSA:3.30.420.40 139 333 3.5E-137 T 11-10-2018 SYN_03090 ab99080f50461e8782cdce8a8da74ccd 362 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 181 198 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 SYN_02703 3c2b8b52057e23d92edeb9996862649c 813 PIRSF PIRSF037472 3 807 0.0 T 11-10-2018 IPR017215 5-methyltetrahydrofolate-homocysteine S-methyltransferase, bacterial SYN_02703 3c2b8b52057e23d92edeb9996862649c 813 SUPERFAMILY SSF51717 320 575 1.96E-70 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SYN_02703 3c2b8b52057e23d92edeb9996862649c 813 SUPERFAMILY SSF47644 600 678 2.48E-18 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SYN_02703 3c2b8b52057e23d92edeb9996862649c 813 Gene3D G3DSA:3.20.20.20 318 585 9.6E-84 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SYN_02703 3c2b8b52057e23d92edeb9996862649c 813 Gene3D G3DSA:3.40.50.280 685 809 1.7E-43 T 11-10-2018 SYN_02703 3c2b8b52057e23d92edeb9996862649c 813 Pfam PF02574 Homocysteine S-methyltransferase 16 285 3.1E-63 T 11-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 SYN_02703 3c2b8b52057e23d92edeb9996862649c 813 Pfam PF00809 Pterin binding enzyme 323 545 5.7E-26 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SYN_02703 3c2b8b52057e23d92edeb9996862649c 813 Pfam PF02310 B12 binding domain 688 789 1.3E-23 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 SYN_02703 3c2b8b52057e23d92edeb9996862649c 813 SUPERFAMILY SSF82282 6 362 6.93E-111 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 SYN_02703 3c2b8b52057e23d92edeb9996862649c 813 SUPERFAMILY SSF52242 665 805 4.45E-38 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 SYN_02703 3c2b8b52057e23d92edeb9996862649c 813 SMART SM01018 597 680 6.0E-29 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SYN_02703 3c2b8b52057e23d92edeb9996862649c 813 Gene3D G3DSA:1.10.1240.10 600 679 1.2E-20 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SYN_02703 3c2b8b52057e23d92edeb9996862649c 813 Gene3D G3DSA:3.20.20.330 1 301 1.3E-104 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 SYN_02703 3c2b8b52057e23d92edeb9996862649c 813 Pfam PF02607 B12 binding domain 601 673 1.3E-18 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SYN_01168 d1ec877002f3ee83026544c08063786a 342 Pfam PF02754 Cysteine-rich domain 227 312 1.7E-7 T 11-10-2018 IPR004017 Cysteine-rich domain SYN_00575 46645da022d5cc330f78143e180341a8 258 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 195 210 5.3E-19 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial SYN_00575 46645da022d5cc330f78143e180341a8 258 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 183 194 5.3E-19 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial SYN_00575 46645da022d5cc330f78143e180341a8 258 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 115 132 5.3E-19 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial SYN_00575 46645da022d5cc330f78143e180341a8 258 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 172 182 5.3E-19 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial SYN_00575 46645da022d5cc330f78143e180341a8 258 Pfam PF01478 Type IV leader peptidase family 107 215 1.9E-20 T 11-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 SYN_00575 46645da022d5cc330f78143e180341a8 258 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 13 96 2.9E-36 T 11-10-2018 IPR010627 Peptidase A24A, N-terminal SYN_01675 ab605a842ab2053bedf7b613e474890a 364 PIRSF PIRSF003085 49 364 2.4E-103 T 11-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 SYN_01675 ab605a842ab2053bedf7b613e474890a 364 Gene3D G3DSA:3.40.50.150 94 364 4.8E-100 T 11-10-2018 SYN_01675 ab605a842ab2053bedf7b613e474890a 364 SUPERFAMILY SSF53335 97 363 5.22E-76 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_01675 ab605a842ab2053bedf7b613e474890a 364 Pfam PF02353 Mycolic acid cyclopropane synthetase 90 353 1.9E-77 T 11-10-2018 SYN_00476 e7365450427c228916819ff5361e7ed6 401 TIGRFAM TIGR00299 TIGR00299: TIGR00299 family protein 9 387 2.7E-109 T 11-10-2018 IPR002822 Nickel insertion protein SYN_00476 e7365450427c228916819ff5361e7ed6 401 Gene3D G3DSA:3.30.70.1380 253 342 2.5E-14 T 11-10-2018 SYN_00476 e7365450427c228916819ff5361e7ed6 401 Hamap MF_01074 Pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel insertion protein [larC]. 7 401 41.129 T 11-10-2018 IPR002822 Nickel insertion protein SYN_00476 e7365450427c228916819ff5361e7ed6 401 Pfam PF01969 Protein of unknown function DUF111 10 391 1.4E-151 T 11-10-2018 IPR002822 Nickel insertion protein SYN_00532 bf4936d9cbf1e38c7377b0dfa68f9972 458 Gene3D G3DSA:3.40.50.720 3 211 1.9E-74 T 11-10-2018 SYN_00532 bf4936d9cbf1e38c7377b0dfa68f9972 458 SUPERFAMILY SSF51735 5 203 1.28E-40 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_00532 bf4936d9cbf1e38c7377b0dfa68f9972 458 Gene3D G3DSA:1.20.5.100 212 243 6.0E-19 T 11-10-2018 SYN_00532 bf4936d9cbf1e38c7377b0dfa68f9972 458 SUPERFAMILY SSF48179 212 312 3.23E-27 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 SYN_00532 bf4936d9cbf1e38c7377b0dfa68f9972 458 PIRSF PIRSF000124 5 452 3.6E-126 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 SYN_00532 bf4936d9cbf1e38c7377b0dfa68f9972 458 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 332 436 1.4E-29 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 SYN_00532 bf4936d9cbf1e38c7377b0dfa68f9972 458 SUPERFAMILY SSF52413 317 447 2.35E-31 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 SYN_00532 bf4936d9cbf1e38c7377b0dfa68f9972 458 Gene3D G3DSA:3.40.50.720 245 457 5.7E-83 T 11-10-2018 SYN_00532 bf4936d9cbf1e38c7377b0dfa68f9972 458 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 6 433 6.0E-99 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 SYN_00532 bf4936d9cbf1e38c7377b0dfa68f9972 458 PIRSF PIRSF500133 1 457 3.4E-216 T 11-10-2018 IPR028356 UDP-glucose 6-dehydrogenase, eukaryotic type GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820|Reactome: R-HSA-173599 SYN_00532 bf4936d9cbf1e38c7377b0dfa68f9972 458 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 213 307 2.6E-31 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 SYN_00532 bf4936d9cbf1e38c7377b0dfa68f9972 458 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 6 187 3.7E-60 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 SYN_00532 bf4936d9cbf1e38c7377b0dfa68f9972 458 SMART SM00984 331 437 3.3E-38 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 SYN_01535 e57160fbaa29aea2864ca439b6b238ad 277 Hamap MF_00201 DNA repair protein RecO [recO]. 23 272 27.392 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 SYN_01535 e57160fbaa29aea2864ca439b6b238ad 277 Pfam PF02565 Recombination protein O C terminal 107 266 4.2E-24 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 SYN_01535 e57160fbaa29aea2864ca439b6b238ad 277 Gene3D G3DSA:2.40.50.140 24 100 6.1E-16 T 11-10-2018 SYN_01535 e57160fbaa29aea2864ca439b6b238ad 277 Pfam PF11967 Recombination protein O N terminal 24 102 4.5E-23 T 11-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal SYN_01535 e57160fbaa29aea2864ca439b6b238ad 277 SUPERFAMILY SSF57863 104 261 5.75E-35 T 11-10-2018 IPR037278 ARFGAP/RecO-like zinc finger SYN_01535 e57160fbaa29aea2864ca439b6b238ad 277 Gene3D G3DSA:1.20.1440.120 108 276 2.1E-12 T 11-10-2018 SYN_01535 e57160fbaa29aea2864ca439b6b238ad 277 TIGRFAM TIGR00613 reco: DNA repair protein RecO 26 272 4.0E-49 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 SYN_01535 e57160fbaa29aea2864ca439b6b238ad 277 SUPERFAMILY SSF50249 24 102 3.6E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_01763 122afc8b10e6d823d8dfaea6f3065960 228 Pfam PF00834 Ribulose-phosphate 3 epimerase family 3 200 1.0E-86 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 SYN_01763 122afc8b10e6d823d8dfaea6f3065960 228 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 31 45 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 SYN_01763 122afc8b10e6d823d8dfaea6f3065960 228 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 3 211 5.8E-93 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 SYN_01763 122afc8b10e6d823d8dfaea6f3065960 228 SUPERFAMILY SSF51366 2 213 1.48E-74 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 SYN_01763 122afc8b10e6d823d8dfaea6f3065960 228 Gene3D G3DSA:3.20.20.70 2 218 3.5E-88 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_01763 122afc8b10e6d823d8dfaea6f3065960 228 PIRSF PIRSF001461 1 223 1.1E-97 T 11-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 SYN_01763 122afc8b10e6d823d8dfaea6f3065960 228 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 133 155 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 SYN_01139 6173a97e21d139f0115da83cfe43559d 487 SUPERFAMILY SSF52540 266 486 1.1E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01139 6173a97e21d139f0115da83cfe43559d 487 Gene3D G3DSA:3.40.50.300 265 487 9.6E-27 T 11-10-2018 SYN_00004 d84c1ecc916570e0ebfd655aa231944e 275 Pfam PF04391 Protein of unknown function (DUF533) 96 269 3.3E-49 T 11-10-2018 IPR007486 Inner membrane protein YebE SYN_00004 d84c1ecc916570e0ebfd655aa231944e 275 SUPERFAMILY SSF158682 124 270 6.15E-21 T 11-10-2018 IPR029024 TerB-like SYN_00004 d84c1ecc916570e0ebfd655aa231944e 275 Gene3D G3DSA:1.10.3680.10 145 275 6.0E-12 T 11-10-2018 IPR029024 TerB-like SYN_03045 8aeaf2dd50cb8ba662d6608afaa64dbe 281 Pfam PF03799 Cell division protein FtsQ 130 254 3.9E-15 T 11-10-2018 IPR005548 Cell division protein FtsQ/DivIB SYN_03045 8aeaf2dd50cb8ba662d6608afaa64dbe 281 Gene3D G3DSA:3.40.50.11690 130 267 7.9E-7 T 11-10-2018 SYN_03045 8aeaf2dd50cb8ba662d6608afaa64dbe 281 Pfam PF08478 POTRA domain, FtsQ-type 57 125 1.6E-14 T 11-10-2018 IPR013685 POTRA domain, FtsQ-type SYN_03045 8aeaf2dd50cb8ba662d6608afaa64dbe 281 Gene3D G3DSA:3.10.20.310 57 124 2.5E-6 T 11-10-2018 SYN_00124 25b7e3f32632d6f8aab77640b4adbcfc 351 Gene3D G3DSA:3.40.640.10 12 230 8.6E-41 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SYN_00124 25b7e3f32632d6f8aab77640b4adbcfc 351 TIGRFAM TIGR01365 serC_2: phosphoserine aminotransferase 10 345 2.6E-155 T 11-10-2018 IPR006271 Phosphoserine aminotransferase, Methanosarcina-type GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52 SYN_00124 25b7e3f32632d6f8aab77640b4adbcfc 351 SUPERFAMILY SSF53383 13 345 9.93E-62 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SYN_00124 25b7e3f32632d6f8aab77640b4adbcfc 351 Gene3D G3DSA:3.90.1150.10 232 346 1.8E-7 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SYN_00124 25b7e3f32632d6f8aab77640b4adbcfc 351 PIRSF PIRSF000525 10 347 3.7E-42 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 SYN_00497 a72bf8c5efbd82c1a578d896bc7ddd99 1043 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 8 711 2.3E-192 T 11-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 SYN_00497 a72bf8c5efbd82c1a578d896bc7ddd99 1043 SMART SM00487 267 493 7.9E-11 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain SYN_00497 a72bf8c5efbd82c1a578d896bc7ddd99 1043 Gene3D G3DSA:3.40.50.300 479 711 3.7E-50 T 11-10-2018 SYN_00497 a72bf8c5efbd82c1a578d896bc7ddd99 1043 SUPERFAMILY SSF52540 222 497 3.55E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00497 a72bf8c5efbd82c1a578d896bc7ddd99 1043 Gene3D G3DSA:3.90.1570.50 88 255 1.8E-35 T 11-10-2018 SYN_00497 a72bf8c5efbd82c1a578d896bc7ddd99 1043 Gene3D G3DSA:3.40.50.300 270 478 1.4E-49 T 11-10-2018 SYN_00497 a72bf8c5efbd82c1a578d896bc7ddd99 1043 Pfam PF11867 Domain of unknown function (DUF3387) 711 1038 2.2E-134 T 11-10-2018 IPR021810 Protein of unknown function DUF3387 SYN_00497 a72bf8c5efbd82c1a578d896bc7ddd99 1043 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 6 199 1.2E-42 T 11-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 SYN_00497 a72bf8c5efbd82c1a578d896bc7ddd99 1043 SUPERFAMILY SSF52540 397 745 1.35E-9 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00497 a72bf8c5efbd82c1a578d896bc7ddd99 1043 Pfam PF04851 Type III restriction enzyme, res subunit 273 460 1.6E-17 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SYN_02709 03d89892e47269bd853a43ec9d789830 257 Gene3D G3DSA:3.60.15.10 46 257 2.5E-77 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_02709 03d89892e47269bd853a43ec9d789830 257 Pfam PF00753 Metallo-beta-lactamase superfamily 60 236 7.3E-30 T 11-10-2018 IPR001279 Metallo-beta-lactamase SYN_02709 03d89892e47269bd853a43ec9d789830 257 SMART SM00849 60 236 1.4E-46 T 11-10-2018 IPR001279 Metallo-beta-lactamase SYN_02709 03d89892e47269bd853a43ec9d789830 257 SUPERFAMILY SSF56281 52 257 2.3E-59 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_02758 fb6632114f61fe8b9ce69441cadba400 303 Gene3D G3DSA:3.40.50.10800 8 283 4.4E-110 T 11-10-2018 SYN_02758 fb6632114f61fe8b9ce69441cadba400 303 Pfam PF02445 Quinolinate synthetase A protein 9 301 1.7E-113 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 SYN_02758 fb6632114f61fe8b9ce69441cadba400 303 Gene3D G3DSA:3.40.50.10800 172 258 4.4E-110 T 11-10-2018 SYN_02758 fb6632114f61fe8b9ce69441cadba400 303 Gene3D G3DSA:3.40.50.10800 88 300 4.4E-110 T 11-10-2018 SYN_02758 fb6632114f61fe8b9ce69441cadba400 303 SUPERFAMILY SSF142754 5 301 2.88E-111 T 11-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 SYN_02758 fb6632114f61fe8b9ce69441cadba400 303 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 1 302 7.7E-106 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 SYN_01793 44c691dd0e6175baa2c5b0d8d066987b 417 Gene3D G3DSA:3.65.10.10 6 412 7.8E-157 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 SYN_01793 44c691dd0e6175baa2c5b0d8d066987b 417 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 414 5.4E-168 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SYN_01793 44c691dd0e6175baa2c5b0d8d066987b 417 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 404 1.1E-102 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 SYN_01793 44c691dd0e6175baa2c5b0d8d066987b 417 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 415 44.168 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SYN_01793 44c691dd0e6175baa2c5b0d8d066987b 417 SUPERFAMILY SSF55205 2 416 2.45E-134 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 SYN_01793 44c691dd0e6175baa2c5b0d8d066987b 417 Gene3D G3DSA:3.65.10.10 21 228 7.8E-157 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 SYN_03204 8433105e80510948e614b2d3ee44080e 255 PIRSF PIRSF005902 1 255 7.1E-87 T 11-10-2018 IPR001130 TatD family GO:0016788 SYN_03204 8433105e80510948e614b2d3ee44080e 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 188 204 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SYN_03204 8433105e80510948e614b2d3ee44080e 255 Pfam PF01026 TatD related DNase 3 252 4.2E-81 T 11-10-2018 IPR001130 TatD family GO:0016788 SYN_03204 8433105e80510948e614b2d3ee44080e 255 Gene3D G3DSA:3.20.20.140 1 254 2.1E-103 T 11-10-2018 SYN_03204 8433105e80510948e614b2d3ee44080e 255 SUPERFAMILY SSF51556 2 253 2.86E-92 T 11-10-2018 IPR032466 Metal-dependent hydrolase SYN_03204 8433105e80510948e614b2d3ee44080e 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 252 2.7E-90 T 11-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 SYN_02899 f5d25ff452d1cad2f437aea1f950fa51 592 SUPERFAMILY SSF55785 17 98 1.12E-5 T 11-10-2018 IPR035965 PAS domain superfamily SYN_02899 f5d25ff452d1cad2f437aea1f950fa51 592 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 361 376 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 SYN_02899 f5d25ff452d1cad2f437aea1f950fa51 592 SUPERFAMILY SSF46689 541 590 1.11E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SYN_02899 f5d25ff452d1cad2f437aea1f950fa51 592 Gene3D G3DSA:1.10.8.60 446 523 2.2E-24 T 11-10-2018 SYN_02899 f5d25ff452d1cad2f437aea1f950fa51 592 Gene3D G3DSA:1.10.10.60 538 591 3.5E-10 T 11-10-2018 SYN_02899 f5d25ff452d1cad2f437aea1f950fa51 592 SUPERFAMILY SSF55785 126 233 3.66E-14 T 11-10-2018 IPR035965 PAS domain superfamily SYN_02899 f5d25ff452d1cad2f437aea1f950fa51 592 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 544 590 1.7E-10 T 11-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 SYN_02899 f5d25ff452d1cad2f437aea1f950fa51 592 Gene3D G3DSA:3.30.450.20 11 115 3.3E-9 T 11-10-2018 SYN_02899 f5d25ff452d1cad2f437aea1f950fa51 592 SUPERFAMILY SSF52540 275 513 4.52E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02899 f5d25ff452d1cad2f437aea1f950fa51 592 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 299 312 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 SYN_02899 f5d25ff452d1cad2f437aea1f950fa51 592 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 134 248 4.4E-12 T 11-10-2018 IPR000014 PAS domain SYN_02899 f5d25ff452d1cad2f437aea1f950fa51 592 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 487 496 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site SYN_02899 f5d25ff452d1cad2f437aea1f950fa51 592 Gene3D G3DSA:3.30.450.20 116 257 1.5E-16 T 11-10-2018 SYN_02899 f5d25ff452d1cad2f437aea1f950fa51 592 SMART SM00382 295 438 2.8E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_02899 f5d25ff452d1cad2f437aea1f950fa51 592 Gene3D G3DSA:3.40.50.300 262 445 6.9E-61 T 11-10-2018 SYN_02899 f5d25ff452d1cad2f437aea1f950fa51 592 SMART SM00091 132 199 3.1E-4 T 11-10-2018 IPR000014 PAS domain SYN_02899 f5d25ff452d1cad2f437aea1f950fa51 592 SMART SM00091 19 84 0.43 T 11-10-2018 IPR000014 PAS domain SYN_02899 f5d25ff452d1cad2f437aea1f950fa51 592 Pfam PF00158 Sigma-54 interaction domain 275 442 3.1E-63 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SYN_02899 f5d25ff452d1cad2f437aea1f950fa51 592 Pfam PF13426 PAS domain 143 240 6.0E-10 T 11-10-2018 IPR000014 PAS domain SYN_00287 5d971b371b873b3e7deae37ea296d0ed 206 SUPERFAMILY SSF48150 30 206 3.3E-61 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 SYN_00287 5d971b371b873b3e7deae37ea296d0ed 206 Gene3D G3DSA:1.10.340.30 31 138 5.5E-63 T 11-10-2018 SYN_00287 5d971b371b873b3e7deae37ea296d0ed 206 Gene3D G3DSA:1.10.1670.10 139 205 5.5E-63 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 SYN_00287 5d971b371b873b3e7deae37ea296d0ed 206 SMART SM00478 44 191 2.9E-59 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 SYN_00287 5d971b371b873b3e7deae37ea296d0ed 206 Pfam PF00633 Helix-hairpin-helix motif 106 133 1.0E-7 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 SYN_00287 5d971b371b873b3e7deae37ea296d0ed 206 PIRSF PIRSF001435 7 206 2.6E-48 T 11-10-2018 SYN_00287 5d971b371b873b3e7deae37ea296d0ed 206 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 40 174 4.5E-25 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 SYN_01279 9d6ea448d7b11519dc08f03d542472d2 207 Pfam PF00625 Guanylate kinase 13 188 6.3E-46 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit SYN_01279 9d6ea448d7b11519dc08f03d542472d2 207 Gene3D G3DSA:3.40.50.300 14 185 3.9E-60 T 11-10-2018 SYN_01279 9d6ea448d7b11519dc08f03d542472d2 207 SMART SM00072 9 190 2.7E-51 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit SYN_01279 9d6ea448d7b11519dc08f03d542472d2 207 SUPERFAMILY SSF52540 8 192 3.08E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01279 9d6ea448d7b11519dc08f03d542472d2 207 Hamap MF_00328 Guanylate kinase [gmk]. 8 190 31.735 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 SYN_01279 9d6ea448d7b11519dc08f03d542472d2 207 Gene3D G3DSA:3.30.63.10 41 100 3.9E-60 T 11-10-2018 SYN_01279 9d6ea448d7b11519dc08f03d542472d2 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 12 187 8.2E-62 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 SYN_01279 9d6ea448d7b11519dc08f03d542472d2 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 44 61 - T 11-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SYN_01015 47244aed7567aba4a5e5282121ef895f 296 Gene3D G3DSA:3.30.1370.50 223 296 4.2E-25 T 11-10-2018 IPR036867 R3H domain superfamily GO:0003676 SYN_01015 47244aed7567aba4a5e5282121ef895f 296 SUPERFAMILY SSF82708 232 286 3.02E-6 T 11-10-2018 IPR036867 R3H domain superfamily GO:0003676 SYN_01015 47244aed7567aba4a5e5282121ef895f 296 Gene3D G3DSA:3.30.300.20 141 222 1.9E-22 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta SYN_01015 47244aed7567aba4a5e5282121ef895f 296 Pfam PF13083 KH domain 146 213 2.0E-13 T 11-10-2018 SYN_01015 47244aed7567aba4a5e5282121ef895f 296 Pfam PF14804 Jag N-terminus 36 84 1.0E-19 T 11-10-2018 IPR032782 Jag, N-terminal SYN_01015 47244aed7567aba4a5e5282121ef895f 296 Gene3D G3DSA:3.30.30.80 29 85 1.3E-20 T 11-10-2018 IPR038247 Jag, N-terminal domain superfamily SYN_01015 47244aed7567aba4a5e5282121ef895f 296 SMART SM00393 208 287 1.3E-12 T 11-10-2018 IPR001374 R3H domain GO:0003676 SYN_01015 47244aed7567aba4a5e5282121ef895f 296 Pfam PF01424 R3H domain 227 284 6.5E-12 T 11-10-2018 IPR001374 R3H domain GO:0003676 SYN_01015 47244aed7567aba4a5e5282121ef895f 296 SMART SM01245 35 86 7.8E-23 T 11-10-2018 IPR032782 Jag, N-terminal SYN_03195 4bae140b78f8ecda21b6ce02fe4bd4d4 461 Pfam PF01435 Peptidase family M48 54 234 4.3E-33 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SYN_03195 4bae140b78f8ecda21b6ce02fe4bd4d4 461 SMART SM00028 403 436 15.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_03195 4bae140b78f8ecda21b6ce02fe4bd4d4 461 SMART SM00028 284 317 2.1E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_03195 4bae140b78f8ecda21b6ce02fe4bd4d4 461 SMART SM00028 318 351 0.13 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_03195 4bae140b78f8ecda21b6ce02fe4bd4d4 461 SUPERFAMILY SSF48452 270 432 1.19E-23 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_03195 4bae140b78f8ecda21b6ce02fe4bd4d4 461 Gene3D G3DSA:3.30.2010.10 43 128 1.0E-8 T 11-10-2018 SYN_03195 4bae140b78f8ecda21b6ce02fe4bd4d4 461 Pfam PF13432 Tetratricopeptide repeat 271 318 1.5E-8 T 11-10-2018 SYN_03195 4bae140b78f8ecda21b6ce02fe4bd4d4 461 Gene3D G3DSA:1.25.40.10 253 449 9.4E-30 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_01393 4f9a5dcd92bbc9f82753ae9235eac7d0 247 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 45 130 2.2E-10 T 11-10-2018 IPR032370 Flagellar assembly protein T, N-terminal SYN_01393 4f9a5dcd92bbc9f82753ae9235eac7d0 247 Gene3D G3DSA:3.30.1660.40 45 133 1.2E-6 T 11-10-2018 IPR038180 FlgT, N-terminal domain superfamily SYN_00412 74c787772dd976882ec40f0274d47e14 355 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 10 344 7.3E-80 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SYN_00412 74c787772dd976882ec40f0274d47e14 355 Gene3D G3DSA:3.30.470.20 120 345 6.0E-66 T 11-10-2018 SYN_00412 74c787772dd976882ec40f0274d47e14 355 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 98 109 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SYN_00412 74c787772dd976882ec40f0274d47e14 355 SUPERFAMILY SSF52440 8 130 1.25E-30 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily SYN_00412 74c787772dd976882ec40f0274d47e14 355 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 9 345 32.656 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SYN_00412 74c787772dd976882ec40f0274d47e14 355 Gene3D G3DSA:3.30.1490.20 146 219 6.0E-66 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 SYN_00412 74c787772dd976882ec40f0274d47e14 355 SUPERFAMILY SSF56059 131 344 7.81E-45 T 11-10-2018 SYN_00412 74c787772dd976882ec40f0274d47e14 355 Pfam PF07478 D-ala D-ala ligase C-terminus 139 342 1.1E-49 T 11-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SYN_00412 74c787772dd976882ec40f0274d47e14 355 Gene3D G3DSA:3.40.50.20 3 119 1.3E-26 T 11-10-2018 SYN_00412 74c787772dd976882ec40f0274d47e14 355 PIRSF PIRSF039102 6 353 2.5E-115 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SYN_00412 74c787772dd976882ec40f0274d47e14 355 Pfam PF01820 D-ala D-ala ligase N-terminus 10 121 5.2E-25 T 11-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SYN_00412 74c787772dd976882ec40f0274d47e14 355 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 287 315 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SYN_00397 02a5529b12d0e24b9f1e88d06305ec39 255 Gene3D G3DSA:3.40.50.300 85 255 1.3E-38 T 11-10-2018 SYN_00397 02a5529b12d0e24b9f1e88d06305ec39 255 SUPERFAMILY SSF52540 93 247 5.87E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00397 02a5529b12d0e24b9f1e88d06305ec39 255 SMART SM00382 119 252 4.0E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00397 02a5529b12d0e24b9f1e88d06305ec39 255 Pfam PF01695 IstB-like ATP binding protein 73 251 6.4E-61 T 11-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 SYN_00397 02a5529b12d0e24b9f1e88d06305ec39 255 PIRSF PIRSF003073 19 255 1.3E-63 T 11-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein SYN_00397 02a5529b12d0e24b9f1e88d06305ec39 255 Pfam PF08483 IstB-like ATP binding N-terminal 44 72 7.5E-13 T 11-10-2018 IPR013690 IstB-like ATP binding N-terminal SYN_02180 8774cfacd6db121ef5bc20e1daf8d4d4 249 Pfam PF01145 SPFH domain / Band 7 family 22 190 5.0E-36 T 11-10-2018 IPR001107 Band 7 domain SYN_02180 8774cfacd6db121ef5bc20e1daf8d4d4 249 Gene3D G3DSA:3.30.479.30 45 176 1.1E-51 T 11-10-2018 SYN_02180 8774cfacd6db121ef5bc20e1daf8d4d4 249 SMART SM00244 17 174 1.0E-68 T 11-10-2018 IPR001107 Band 7 domain SYN_02180 8774cfacd6db121ef5bc20e1daf8d4d4 249 SUPERFAMILY SSF117892 48 181 3.27E-45 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily SYN_02180 8774cfacd6db121ef5bc20e1daf8d4d4 249 PRINTS PR00721 Stomatin signature 169 190 2.7E-69 T 11-10-2018 IPR001972 Stomatin family GO:0016020 SYN_02180 8774cfacd6db121ef5bc20e1daf8d4d4 249 PRINTS PR00721 Stomatin signature 24 46 2.7E-69 T 11-10-2018 IPR001972 Stomatin family GO:0016020 SYN_02180 8774cfacd6db121ef5bc20e1daf8d4d4 249 PRINTS PR00721 Stomatin signature 194 217 2.7E-69 T 11-10-2018 IPR001972 Stomatin family GO:0016020 SYN_02180 8774cfacd6db121ef5bc20e1daf8d4d4 249 PRINTS PR00721 Stomatin signature 106 123 2.7E-69 T 11-10-2018 IPR001972 Stomatin family GO:0016020 SYN_02180 8774cfacd6db121ef5bc20e1daf8d4d4 249 PRINTS PR00721 Stomatin signature 150 168 2.7E-69 T 11-10-2018 IPR001972 Stomatin family GO:0016020 SYN_02180 8774cfacd6db121ef5bc20e1daf8d4d4 249 PRINTS PR00721 Stomatin signature 126 149 2.7E-69 T 11-10-2018 IPR001972 Stomatin family GO:0016020 SYN_02180 8774cfacd6db121ef5bc20e1daf8d4d4 249 PRINTS PR00721 Stomatin signature 71 92 2.7E-69 T 11-10-2018 IPR001972 Stomatin family GO:0016020 SYN_00792 a3f1f1086d3817c7f14c346d351e30da 306 Hamap MF_00367 GTPase Era [era]. 13 304 37.439 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00792 a3f1f1086d3817c7f14c346d351e30da 306 TIGRFAM TIGR00436 era: GTP-binding protein Era 16 287 2.3E-90 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00792 a3f1f1086d3817c7f14c346d351e30da 306 SUPERFAMILY SSF54814 188 305 5.56E-43 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 SYN_00792 a3f1f1086d3817c7f14c346d351e30da 306 Pfam PF07650 KH domain 215 292 3.1E-18 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00792 a3f1f1086d3817c7f14c346d351e30da 306 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 16 169 1.5E-27 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 SYN_00792 a3f1f1086d3817c7f14c346d351e30da 306 Gene3D G3DSA:3.30.300.20 193 306 2.8E-44 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta SYN_00792 a3f1f1086d3817c7f14c346d351e30da 306 Pfam PF01926 50S ribosome-binding GTPase 18 132 1.3E-22 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 SYN_00792 a3f1f1086d3817c7f14c346d351e30da 306 Gene3D G3DSA:3.40.50.300 12 192 2.6E-44 T 11-10-2018 SYN_00792 a3f1f1086d3817c7f14c346d351e30da 306 SUPERFAMILY SSF52540 18 214 2.36E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01965 fd3605ec686757152ab1b994c7090e0d 526 SUPERFAMILY SSF52518 351 524 1.23E-39 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold SYN_01965 fd3605ec686757152ab1b994c7090e0d 526 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 172 1.1E-29 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SYN_01965 fd3605ec686757152ab1b994c7090e0d 526 SUPERFAMILY SSF52518 4 176 6.87E-34 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold SYN_01965 fd3605ec686757152ab1b994c7090e0d 526 Gene3D G3DSA:3.40.50.1220 185 325 4.3E-5 T 11-10-2018 SYN_01965 fd3605ec686757152ab1b994c7090e0d 526 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 384 519 8.8E-25 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SYN_01965 fd3605ec686757152ab1b994c7090e0d 526 Gene3D G3DSA:3.40.50.970 6 174 7.9E-35 T 11-10-2018 SYN_01965 fd3605ec686757152ab1b994c7090e0d 526 Gene3D G3DSA:3.40.50.970 342 526 6.9E-43 T 11-10-2018 SYN_02688 d555a5e008ae18eb48978df3d097462b 403 PIRSF PIRSF000390 14 402 9.1E-113 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SYN_02688 d555a5e008ae18eb48978df3d097462b 403 Gene3D G3DSA:3.40.640.10 8 268 1.0E-89 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SYN_02688 d555a5e008ae18eb48978df3d097462b 403 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 27 391 4.9E-104 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SYN_02688 d555a5e008ae18eb48978df3d097462b 403 SUPERFAMILY SSF53383 16 396 2.99E-109 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SYN_02688 d555a5e008ae18eb48978df3d097462b 403 Gene3D G3DSA:3.90.1150.10 269 402 2.3E-21 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SYN_00666 a0aa765c6703a2e1a68f5266e5326e8f 228 PIRSF PIRSF036893 45 225 5.4E-42 T 11-10-2018 IPR022271 Lipocalin, ApoD type SYN_00666 a0aa765c6703a2e1a68f5266e5326e8f 228 PRINTS PR01171 Bacterial lipocalin signature 76 90 1.9E-31 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 SYN_00666 a0aa765c6703a2e1a68f5266e5326e8f 228 PRINTS PR01171 Bacterial lipocalin signature 146 160 1.9E-31 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 SYN_00666 a0aa765c6703a2e1a68f5266e5326e8f 228 PRINTS PR01171 Bacterial lipocalin signature 179 190 1.9E-31 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 SYN_00666 a0aa765c6703a2e1a68f5266e5326e8f 228 PRINTS PR01171 Bacterial lipocalin signature 93 109 1.9E-31 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 SYN_00666 a0aa765c6703a2e1a68f5266e5326e8f 228 PRINTS PR01171 Bacterial lipocalin signature 112 121 1.9E-31 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 SYN_00666 a0aa765c6703a2e1a68f5266e5326e8f 228 ProSitePatterns PS00213 Lipocalin signature. 75 88 - T 11-10-2018 IPR022272 Lipocalin family conserved site SYN_00666 a0aa765c6703a2e1a68f5266e5326e8f 228 Pfam PF08212 Lipocalin-like domain 77 204 1.2E-39 T 11-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain SYN_00666 a0aa765c6703a2e1a68f5266e5326e8f 228 Gene3D G3DSA:2.40.128.20 59 212 4.6E-50 T 11-10-2018 IPR012674 Calycin SYN_00666 a0aa765c6703a2e1a68f5266e5326e8f 228 SUPERFAMILY SSF50814 54 207 2.12E-48 T 11-10-2018 IPR012674 Calycin SYN_00757 c51de519fbc25b8afe37da2067b17727 580 SUPERFAMILY SSF88946 111 417 3.3E-66 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 SYN_00757 c51de519fbc25b8afe37da2067b17727 580 Gene3D G3DSA:1.10.10.10 500 580 3.8E-10 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_00757 c51de519fbc25b8afe37da2067b17727 580 Pfam PF04539 Sigma-70 region 3 429 505 7.9E-30 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 SYN_00757 c51de519fbc25b8afe37da2067b17727 580 Gene3D G3DSA:1.10.10.10 423 499 4.2E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_00757 c51de519fbc25b8afe37da2067b17727 580 SUPERFAMILY SSF88659 423 496 1.96E-21 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like SYN_00757 c51de519fbc25b8afe37da2067b17727 580 Pfam PF03979 Sigma-70 factor, region 1.1 6 74 2.4E-18 T 11-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 SYN_00757 c51de519fbc25b8afe37da2067b17727 580 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 374 387 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SYN_00757 c51de519fbc25b8afe37da2067b17727 580 Pfam PF04542 Sigma-70 region 2 350 419 3.6E-22 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 SYN_00757 c51de519fbc25b8afe37da2067b17727 580 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 345 534 1.9E-30 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 SYN_00757 c51de519fbc25b8afe37da2067b17727 580 Pfam PF00140 Sigma-70 factor, region 1.2 94 126 5.4E-11 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SYN_00757 c51de519fbc25b8afe37da2067b17727 580 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 5 578 33.439 T 11-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 SYN_00757 c51de519fbc25b8afe37da2067b17727 580 PRINTS PR00046 Major sigma-70 factor signature 374 387 9.7E-15 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SYN_00757 c51de519fbc25b8afe37da2067b17727 580 PRINTS PR00046 Major sigma-70 factor signature 398 406 9.7E-15 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SYN_00757 c51de519fbc25b8afe37da2067b17727 580 PRINTS PR00046 Major sigma-70 factor signature 522 534 9.7E-15 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 SYN_00757 c51de519fbc25b8afe37da2067b17727 580 Gene3D G3DSA:1.10.601.10 92 422 1.1E-105 T 11-10-2018 SYN_00757 c51de519fbc25b8afe37da2067b17727 580 SUPERFAMILY SSF88659 480 547 2.39E-10 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like SYN_00757 c51de519fbc25b8afe37da2067b17727 580 Gene3D G3DSA:1.10.220.120 3 63 1.4E-21 T 11-10-2018 SYN_00393 87f8746f87ba5eb7b64f19d033615e2d 87 Gene3D G3DSA:3.40.1440.10 1 87 8.4E-33 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 SYN_00393 87f8746f87ba5eb7b64f19d033615e2d 87 Pfam PF01541 GIY-YIG catalytic domain 3 76 1.6E-14 T 11-10-2018 IPR000305 GIY-YIG endonuclease SYN_00393 87f8746f87ba5eb7b64f19d033615e2d 87 SUPERFAMILY SSF82771 3 75 2.22E-13 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 SYN_01514 4d3cea5111c1e7f17f6ba7b74900daf8 431 Pfam PF13173 AAA domain 33 167 2.2E-36 T 11-10-2018 SYN_01514 4d3cea5111c1e7f17f6ba7b74900daf8 431 SUPERFAMILY SSF52540 33 230 2.75E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01514 4d3cea5111c1e7f17f6ba7b74900daf8 431 Pfam PF13635 Domain of unknown function (DUF4143) 227 364 7.9E-14 T 11-10-2018 IPR025420 Domain of unknown function DUF4143 SYN_01514 4d3cea5111c1e7f17f6ba7b74900daf8 431 Gene3D G3DSA:3.40.50.300 72 156 1.2E-5 T 11-10-2018 SYN_01175 437ccbd3f9dea520c0a48caec757741e 163 Pfam PF01980 Uncharacterised protein family UPF0066 23 135 5.8E-35 T 11-10-2018 IPR023370 YaeB-like, N-terminal domain SYN_01175 437ccbd3f9dea520c0a48caec757741e 163 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 6 139 5.1E-36 T 11-10-2018 IPR023370 YaeB-like, N-terminal domain SYN_01175 437ccbd3f9dea520c0a48caec757741e 163 SUPERFAMILY SSF118196 6 147 1.96E-48 T 11-10-2018 IPR036413 YaeB-like superfamily SYN_01175 437ccbd3f9dea520c0a48caec757741e 163 Gene3D G3DSA:2.40.30.70 6 153 2.6E-43 T 11-10-2018 IPR036414 YaeB, N-terminal domain superfamily SYN_01281 29865fc09b5016ba5fceba5be25ba3d1 251 SMART SM00934 13 240 3.9E-81 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 SYN_01281 29865fc09b5016ba5fceba5be25ba3d1 251 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 66 79 - T 11-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 SYN_01281 29865fc09b5016ba5fceba5be25ba3d1 251 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 11 245 35.132 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 SYN_01281 29865fc09b5016ba5fceba5be25ba3d1 251 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 13 238 5.2E-40 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 SYN_01281 29865fc09b5016ba5fceba5be25ba3d1 251 SUPERFAMILY SSF51366 12 243 2.42E-64 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 SYN_01281 29865fc09b5016ba5fceba5be25ba3d1 251 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 14 238 1.5E-54 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 SYN_01281 29865fc09b5016ba5fceba5be25ba3d1 251 Gene3D G3DSA:3.20.20.70 6 246 1.3E-79 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_02898 0d75fc82aca86152bcf2d7df7767e453 524 Pfam PF00501 AMP-binding enzyme 23 430 1.1E-91 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 SYN_02898 0d75fc82aca86152bcf2d7df7767e453 524 Gene3D G3DSA:3.40.50.12780 5 423 3.2E-117 T 11-10-2018 SYN_02898 0d75fc82aca86152bcf2d7df7767e453 524 SUPERFAMILY SSF56801 6 524 1.96E-145 T 11-10-2018 SYN_02898 0d75fc82aca86152bcf2d7df7767e453 524 Gene3D G3DSA:3.30.300.310 426 524 1.3E-30 T 11-10-2018 SYN_02898 0d75fc82aca86152bcf2d7df7767e453 524 Pfam PF13193 AMP-binding enzyme C-terminal domain 439 517 4.0E-21 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain SYN_02898 0d75fc82aca86152bcf2d7df7767e453 524 TIGRFAM TIGR02262 benz_CoA_lig: benzoate-CoA ligase family 9 524 1.9E-188 T 11-10-2018 IPR011957 Benzoate-CoA ligase family GO:0005524|GO:0016405 SYN_02904 d0aa2da45004c79027db2b0479c11630 430 Gene3D G3DSA:1.20.1250.20 11 212 3.4E-6 T 11-10-2018 SYN_02904 d0aa2da45004c79027db2b0479c11630 430 SUPERFAMILY SSF103473 11 422 4.97E-28 T 11-10-2018 IPR036259 MFS transporter superfamily SYN_02904 d0aa2da45004c79027db2b0479c11630 430 Gene3D G3DSA:1.20.1250.20 226 425 2.8E-8 T 11-10-2018 SYN_02904 d0aa2da45004c79027db2b0479c11630 430 Pfam PF07690 Major Facilitator Superfamily 30 361 4.7E-9 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SYN_00159 2b1c5ddcf635843bafde579fe1146f24 284 Pfam PF05681 Fumarate hydratase (Fumerase) 15 282 3.6E-106 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 SYN_00159 2b1c5ddcf635843bafde579fe1146f24 284 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 13 283 1.3E-95 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 SYN_01209 73601f41ce229669587e1450befd1bd6 551 Gene3D G3DSA:3.20.70.20 1 548 1.2E-204 T 11-10-2018 SYN_01209 73601f41ce229669587e1450befd1bd6 551 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 14 543 1.1E-186 T 11-10-2018 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SYN_01209 73601f41ce229669587e1450befd1bd6 551 PRINTS PR01183 Ribonucleotide reductase large chain signature 339 361 2.3E-23 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SYN_01209 73601f41ce229669587e1450befd1bd6 551 PRINTS PR01183 Ribonucleotide reductase large chain signature 301 324 2.3E-23 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SYN_01209 73601f41ce229669587e1450befd1bd6 551 PRINTS PR01183 Ribonucleotide reductase large chain signature 164 183 2.3E-23 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SYN_01209 73601f41ce229669587e1450befd1bd6 551 PRINTS PR01183 Ribonucleotide reductase large chain signature 407 434 2.3E-23 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SYN_01209 73601f41ce229669587e1450befd1bd6 551 Pfam PF02867 Ribonucleotide reductase, barrel domain 89 533 1.4E-131 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SYN_01209 73601f41ce229669587e1450befd1bd6 551 SUPERFAMILY SSF48168 8 87 1.57E-14 T 11-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SYN_01209 73601f41ce229669587e1450befd1bd6 551 SUPERFAMILY SSF51998 88 546 1.4E-141 T 11-10-2018 SYN_01209 73601f41ce229669587e1450befd1bd6 551 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 7 86 4.4E-25 T 11-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 SYN_01029 69963ac753509844a4a308b4c23a572c 401 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 175 338 8.9E-21 T 11-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 SYN_01029 69963ac753509844a4a308b4c23a572c 401 SUPERFAMILY SSF53335 91 394 1.3E-65 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_01029 69963ac753509844a4a308b4c23a572c 401 Gene3D G3DSA:3.30.750.80 80 185 1.1E-34 T 11-10-2018 SYN_01029 69963ac753509844a4a308b4c23a572c 401 SMART SM00359 9 94 4.2E-13 T 11-10-2018 IPR002478 PUA domain GO:0003723 SYN_01029 69963ac753509844a4a308b4c23a572c 401 Gene3D G3DSA:2.30.130.10 9 77 5.9E-23 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 SYN_01029 69963ac753509844a4a308b4c23a572c 401 Gene3D G3DSA:3.40.50.150 189 400 3.0E-65 T 11-10-2018 SYN_01029 69963ac753509844a4a308b4c23a572c 401 SUPERFAMILY SSF88697 9 75 1.44E-17 T 11-10-2018 IPR015947 PUA-like superfamily SYN_00634 f2b5a66dd1edbc2ff33b4b3816e528fb 811 Gene3D G3DSA:3.40.228.10 1 274 6.3E-72 T 11-10-2018 SYN_00634 f2b5a66dd1edbc2ff33b4b3816e528fb 811 Gene3D G3DSA:3.40.50.740 296 468 1.3E-60 T 11-10-2018 SYN_00634 f2b5a66dd1edbc2ff33b4b3816e528fb 811 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 1 810 0.0 T 11-10-2018 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 SYN_00634 f2b5a66dd1edbc2ff33b4b3816e528fb 811 Pfam PF00384 Molybdopterin oxidoreductase 3 370 1.0E-21 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00634 f2b5a66dd1edbc2ff33b4b3816e528fb 811 Pfam PF01568 Molydopterin dinucleotide binding domain 685 804 1.7E-10 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 SYN_00634 f2b5a66dd1edbc2ff33b4b3816e528fb 811 Gene3D G3DSA:2.40.40.20 632 811 5.8E-70 T 11-10-2018 SYN_00634 f2b5a66dd1edbc2ff33b4b3816e528fb 811 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 721 748 - T 11-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 SYN_00634 f2b5a66dd1edbc2ff33b4b3816e528fb 811 SUPERFAMILY SSF50692 623 811 2.71E-41 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily SYN_00634 f2b5a66dd1edbc2ff33b4b3816e528fb 811 SUPERFAMILY SSF53706 1 642 1.19E-225 T 11-10-2018 SYN_00634 f2b5a66dd1edbc2ff33b4b3816e528fb 811 Gene3D G3DSA:3.40.228.10 550 631 3.9E-24 T 11-10-2018 SYN_02544 58acf32da5b5d13bcb427311070d32c8 144 SUPERFAMILY SSF52402 1 143 1.84E-33 T 11-10-2018 SYN_02544 58acf32da5b5d13bcb427311070d32c8 144 Pfam PF00582 Universal stress protein family 1 143 3.0E-31 T 11-10-2018 IPR006016 UspA SYN_02544 58acf32da5b5d13bcb427311070d32c8 144 Gene3D G3DSA:3.40.50.620 1 144 5.9E-41 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_02544 58acf32da5b5d13bcb427311070d32c8 144 PRINTS PR01438 Universal stress protein signature 121 143 2.6E-23 T 11-10-2018 IPR006015 Universal stress protein A SYN_02544 58acf32da5b5d13bcb427311070d32c8 144 PRINTS PR01438 Universal stress protein signature 103 115 2.6E-23 T 11-10-2018 IPR006015 Universal stress protein A SYN_02544 58acf32da5b5d13bcb427311070d32c8 144 PRINTS PR01438 Universal stress protein signature 2 20 2.6E-23 T 11-10-2018 IPR006015 Universal stress protein A SYN_00833 e1c7e1a48653a2f53ed944bf8fad136d 588 Pfam PF01841 Transglutaminase-like superfamily 179 293 3.6E-27 T 11-10-2018 IPR002931 Transglutaminase-like SYN_00833 e1c7e1a48653a2f53ed944bf8fad136d 588 Gene3D G3DSA:3.10.620.30 129 321 1.3E-33 T 11-10-2018 SYN_00833 e1c7e1a48653a2f53ed944bf8fad136d 588 SMART SM00460 220 295 1.2E-13 T 11-10-2018 IPR002931 Transglutaminase-like SYN_00833 e1c7e1a48653a2f53ed944bf8fad136d 588 SUPERFAMILY SSF54001 171 312 1.4E-30 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily SYN_00384 632a4b41ee2c93cfcf4c1a56e3a85284 459 Gene3D G3DSA:3.30.420.10 141 277 5.2E-5 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 SYN_00384 632a4b41ee2c93cfcf4c1a56e3a85284 459 Pfam PF13482 RNase_H superfamily 126 296 8.9E-36 T 11-10-2018 IPR038720 YprB, ribonuclease H-like domain SYN_00384 632a4b41ee2c93cfcf4c1a56e3a85284 459 Gene3D G3DSA:1.25.40.10 290 443 4.8E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00384 632a4b41ee2c93cfcf4c1a56e3a85284 459 SUPERFAMILY SSF48452 313 438 1.97E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00384 632a4b41ee2c93cfcf4c1a56e3a85284 459 SUPERFAMILY SSF53098 126 300 1.67E-24 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily SYN_00174 9033b6e87e60ffa0f620fff782f2d160 615 Gene3D G3DSA:3.40.50.2300 493 615 3.9E-29 T 11-10-2018 SYN_00174 9033b6e87e60ffa0f620fff782f2d160 615 Gene3D G3DSA:3.30.565.10 315 485 2.1E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_00174 9033b6e87e60ffa0f620fff782f2d160 615 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 65 191 5.6E-12 T 11-10-2018 IPR000014 PAS domain SYN_00174 9033b6e87e60ffa0f620fff782f2d160 615 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 420 6.8E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_00174 9033b6e87e60ffa0f620fff782f2d160 615 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 474 6.8E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_00174 9033b6e87e60ffa0f620fff782f2d160 615 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 434 6.8E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_00174 9033b6e87e60ffa0f620fff782f2d160 615 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 455 6.8E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_00174 9033b6e87e60ffa0f620fff782f2d160 615 SMART SM00388 246 312 1.4E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_00174 9033b6e87e60ffa0f620fff782f2d160 615 Gene3D G3DSA:3.30.450.20 78 189 4.2E-20 T 11-10-2018 SYN_00174 9033b6e87e60ffa0f620fff782f2d160 615 SUPERFAMILY SSF55874 301 476 6.68E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_00174 9033b6e87e60ffa0f620fff782f2d160 615 SMART SM00086 143 185 2.0E-7 T 11-10-2018 IPR001610 PAC motif SYN_00174 9033b6e87e60ffa0f620fff782f2d160 615 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 354 474 1.0E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_00174 9033b6e87e60ffa0f620fff782f2d160 615 SMART SM00387 353 477 8.8E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_00174 9033b6e87e60ffa0f620fff782f2d160 615 Pfam PF08447 PAS fold 101 178 1.4E-17 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 SYN_00174 9033b6e87e60ffa0f620fff782f2d160 615 SUPERFAMILY SSF47384 235 312 5.3E-9 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SYN_00174 9033b6e87e60ffa0f620fff782f2d160 615 Gene3D G3DSA:1.10.287.130 238 310 1.9E-17 T 11-10-2018 SYN_00174 9033b6e87e60ffa0f620fff782f2d160 615 SMART SM00448 494 607 2.3E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00174 9033b6e87e60ffa0f620fff782f2d160 615 SUPERFAMILY SSF52172 494 612 2.56E-31 T 11-10-2018 IPR011006 CheY-like superfamily SYN_00174 9033b6e87e60ffa0f620fff782f2d160 615 Pfam PF00072 Response regulator receiver domain 496 607 1.2E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00174 9033b6e87e60ffa0f620fff782f2d160 615 SUPERFAMILY SSF55785 74 187 1.24E-18 T 11-10-2018 IPR035965 PAS domain superfamily SYN_01157 1ca3ad11064466571684a26aff7a3e44 177 SUPERFAMILY SSF49764 36 164 5.44E-24 T 11-10-2018 IPR008978 HSP20-like chaperone SYN_01157 1ca3ad11064466571684a26aff7a3e44 177 Gene3D G3DSA:2.60.40.790 39 177 8.2E-24 T 11-10-2018 IPR008978 HSP20-like chaperone SYN_01157 1ca3ad11064466571684a26aff7a3e44 177 Pfam PF00011 Hsp20/alpha crystallin family 71 165 1.3E-15 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain SYN_00134 bea2d41fae22700cebdeffbd38462a51 322 Pfam PF14559 Tetratricopeptide repeat 126 182 9.3E-8 T 11-10-2018 SYN_00134 bea2d41fae22700cebdeffbd38462a51 322 Pfam PF13374 Tetratricopeptide repeat 253 282 5.5E-5 T 11-10-2018 SYN_00134 bea2d41fae22700cebdeffbd38462a51 322 Gene3D G3DSA:1.25.40.10 83 185 2.9E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00134 bea2d41fae22700cebdeffbd38462a51 322 Gene3D G3DSA:1.25.40.10 257 322 4.4E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00134 bea2d41fae22700cebdeffbd38462a51 322 Pfam PF13432 Tetratricopeptide repeat 16 63 7.9E-6 T 11-10-2018 SYN_00134 bea2d41fae22700cebdeffbd38462a51 322 SUPERFAMILY SSF48452 19 297 6.75E-35 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00134 bea2d41fae22700cebdeffbd38462a51 322 Gene3D G3DSA:1.25.40.10 1 79 2.6E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00134 bea2d41fae22700cebdeffbd38462a51 322 Gene3D G3DSA:1.25.40.10 186 256 7.7E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00134 bea2d41fae22700cebdeffbd38462a51 322 SMART SM00028 218 251 100.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00134 bea2d41fae22700cebdeffbd38462a51 322 SMART SM00028 287 320 23.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00134 bea2d41fae22700cebdeffbd38462a51 322 SMART SM00028 43 78 350.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00134 bea2d41fae22700cebdeffbd38462a51 322 SMART SM00028 184 217 29.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00134 bea2d41fae22700cebdeffbd38462a51 322 SMART SM00028 115 148 110.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00134 bea2d41fae22700cebdeffbd38462a51 322 SMART SM00028 253 286 2.6E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00134 bea2d41fae22700cebdeffbd38462a51 322 SMART SM00028 149 182 1.6E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00999 13409cb2d401a7afb8bfed8205df17a2 322 Gene3D G3DSA:3.10.350.10 20 79 1.1E-14 T 11-10-2018 IPR036779 LysM domain superfamily SYN_00999 13409cb2d401a7afb8bfed8205df17a2 322 SMART SM00257 26 70 6.8E-12 T 11-10-2018 IPR018392 LysM domain SYN_00999 13409cb2d401a7afb8bfed8205df17a2 322 SUPERFAMILY SSF51261 201 321 5.23E-30 T 11-10-2018 IPR011055 Duplicated hybrid motif SYN_00999 13409cb2d401a7afb8bfed8205df17a2 322 Pfam PF01551 Peptidase family M23 224 317 1.8E-20 T 11-10-2018 IPR016047 Peptidase M23 SYN_00999 13409cb2d401a7afb8bfed8205df17a2 322 Gene3D G3DSA:2.70.70.10 189 321 1.5E-29 T 11-10-2018 IPR011055 Duplicated hybrid motif SYN_00999 13409cb2d401a7afb8bfed8205df17a2 322 Pfam PF01476 LysM domain 27 70 4.3E-13 T 11-10-2018 IPR018392 LysM domain SYN_00999 13409cb2d401a7afb8bfed8205df17a2 322 SUPERFAMILY SSF54106 25 70 8.89E-11 T 11-10-2018 SYN_00058 5b6dc7f53ebd9796a049c4760668e061 291 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 16 286 9.6E-90 T 11-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 SYN_00058 5b6dc7f53ebd9796a049c4760668e061 291 Gene3D G3DSA:1.10.3720.10 62 290 5.8E-33 T 11-10-2018 IPR035906 MetI-like superfamily SYN_00058 5b6dc7f53ebd9796a049c4760668e061 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 288 2.9E-24 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 SYN_00058 5b6dc7f53ebd9796a049c4760668e061 291 SUPERFAMILY SSF161098 24 277 4.86E-37 T 11-10-2018 IPR035906 MetI-like superfamily SYN_01053 76ea725bdff81cfcba3b1177a486410a 144 TIGRFAM TIGR02805 exbB2: tonB-system energizer ExbB 2 137 6.1E-48 T 11-10-2018 IPR014172 TonB-system energizer ExbB type-2 GO:0016020|GO:0055085 SYN_01053 76ea725bdff81cfcba3b1177a486410a 144 Pfam PF01618 MotA/TolQ/ExbB proton channel family 50 136 9.5E-28 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel SYN_01308 7b230939ed3ab1f93a427e0d9d560d45 255 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 1 255 37.509 T 11-10-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 SYN_01308 7b230939ed3ab1f93a427e0d9d560d45 255 Pfam PF02649 Type I GTP cyclohydrolase folE2 1 250 9.2E-100 T 11-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 SYN_01308 7b230939ed3ab1f93a427e0d9d560d45 255 Gene3D G3DSA:3.10.270.10 12 255 2.4E-99 T 11-10-2018 SYN_01568 62fb3a8f682057f1dcfddf03cb9b26f5 363 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 8 325 36.063 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 SYN_01568 62fb3a8f682057f1dcfddf03cb9b26f5 363 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 SYN_01568 62fb3a8f682057f1dcfddf03cb9b26f5 363 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 7 326 2.0E-113 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 SYN_01568 62fb3a8f682057f1dcfddf03cb9b26f5 363 Gene3D G3DSA:2.160.10.10 100 306 1.5E-60 T 11-10-2018 SYN_01568 62fb3a8f682057f1dcfddf03cb9b26f5 363 Gene3D G3DSA:3.40.1390.10 2 98 5.1E-25 T 11-10-2018 SYN_01568 62fb3a8f682057f1dcfddf03cb9b26f5 363 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 267 295 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 SYN_01568 62fb3a8f682057f1dcfddf03cb9b26f5 363 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 23 88 2.1E-18 T 11-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 SYN_01568 62fb3a8f682057f1dcfddf03cb9b26f5 363 SUPERFAMILY SSF51161 31 315 3.98E-78 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily SYN_01568 62fb3a8f682057f1dcfddf03cb9b26f5 363 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 8.8E-6 T 11-10-2018 IPR001451 Hexapeptide repeat SYN_01568 62fb3a8f682057f1dcfddf03cb9b26f5 363 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 223 257 6.4E-6 T 11-10-2018 IPR001451 Hexapeptide repeat SYN_03243 abdb8296e6a5fa3153f21d07373413e6 335 Gene3D G3DSA:3.30.70.1360 98 321 2.8E-59 T 11-10-2018 IPR036984 NrpR domain superfamily SYN_03243 abdb8296e6a5fa3153f21d07373413e6 335 Gene3D G3DSA:3.30.70.1360 168 293 2.8E-59 T 11-10-2018 IPR036984 NrpR domain superfamily SYN_03243 abdb8296e6a5fa3153f21d07373413e6 335 Pfam PF08461 Ribonuclease R winged-helix domain 11 74 1.1E-15 T 11-10-2018 IPR013668 Ribonuclease R winged-helix domain SYN_03243 abdb8296e6a5fa3153f21d07373413e6 335 Gene3D G3DSA:1.10.10.10 1 69 7.7E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_03243 abdb8296e6a5fa3153f21d07373413e6 335 Pfam PF01995 Domain of unknown function DUF128 84 321 2.8E-81 T 11-10-2018 IPR002846 NrpR regulatory domain SYN_02799 f697b02cbd43911473e4e51138f26e94 441 Pfam PF01134 Glucose inhibited division protein A 7 370 9.3E-106 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 SYN_02799 f697b02cbd43911473e4e51138f26e94 441 Gene3D G3DSA:3.50.50.60 294 441 2.9E-49 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_02799 f697b02cbd43911473e4e51138f26e94 441 Gene3D G3DSA:3.50.50.60 4 181 1.5E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_02799 f697b02cbd43911473e4e51138f26e94 441 SUPERFAMILY SSF51905 7 361 9.07E-21 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_02799 f697b02cbd43911473e4e51138f26e94 441 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 6 436 2.5E-190 T 11-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 SYN_02799 f697b02cbd43911473e4e51138f26e94 441 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 7 436 35.586 T 11-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 SYN_01307 91c1bad72736baa47a65c672114f2534 691 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 20 678 27.382 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 SYN_01307 91c1bad72736baa47a65c672114f2534 691 Gene3D G3DSA:3.60.110.10 9 332 1.7E-80 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily SYN_01307 91c1bad72736baa47a65c672114f2534 691 TIGRFAM TIGR00552 nadE: NAD+ synthetase 361 531 7.0E-21 T 11-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 SYN_01307 91c1bad72736baa47a65c672114f2534 691 Pfam PF02540 NAD synthase 357 531 5.7E-24 T 11-10-2018 IPR022310 NAD/GMP synthase SYN_01307 91c1bad72736baa47a65c672114f2534 691 PIRSF PIRSF006630 17 680 1.9E-148 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 SYN_01307 91c1bad72736baa47a65c672114f2534 691 SUPERFAMILY SSF56317 19 304 4.32E-43 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily SYN_01307 91c1bad72736baa47a65c672114f2534 691 Gene3D G3DSA:1.10.10.1140 569 689 1.6E-42 T 11-10-2018 SYN_01307 91c1bad72736baa47a65c672114f2534 691 Pfam PF00795 Carbon-nitrogen hydrolase 23 292 1.6E-14 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 SYN_01307 91c1bad72736baa47a65c672114f2534 691 SUPERFAMILY SSF52402 335 658 5.07E-63 T 11-10-2018 SYN_01307 91c1bad72736baa47a65c672114f2534 691 Gene3D G3DSA:3.40.50.620 334 553 6.2E-62 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_00928 964ba79cdf38aeb1f77aed44216988fa 276 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 226 240 - T 11-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 SYN_00928 964ba79cdf38aeb1f77aed44216988fa 276 Gene3D G3DSA:3.40.190.80 156 275 1.7E-38 T 11-10-2018 SYN_00928 964ba79cdf38aeb1f77aed44216988fa 276 SUPERFAMILY SSF56655 19 274 3.01E-85 T 11-10-2018 SYN_00928 964ba79cdf38aeb1f77aed44216988fa 276 Pfam PF00459 Inositol monophosphatase family 22 274 2.2E-68 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 SYN_00928 964ba79cdf38aeb1f77aed44216988fa 276 Gene3D G3DSA:3.30.540.10 16 155 1.1E-48 T 11-10-2018 SYN_00928 964ba79cdf38aeb1f77aed44216988fa 276 PRINTS PR01959 SuhB family inositol monophosphatase signature 171 197 2.3E-11 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 SYN_00928 964ba79cdf38aeb1f77aed44216988fa 276 PRINTS PR01959 SuhB family inositol monophosphatase signature 119 138 2.3E-11 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 SYN_00928 964ba79cdf38aeb1f77aed44216988fa 276 PRINTS PR01959 SuhB family inositol monophosphatase signature 213 225 2.3E-11 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 SYN_00928 964ba79cdf38aeb1f77aed44216988fa 276 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 96 109 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site SYN_00928 964ba79cdf38aeb1f77aed44216988fa 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 96 112 9.8E-52 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 SYN_00928 964ba79cdf38aeb1f77aed44216988fa 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 223 247 9.8E-52 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 SYN_00928 964ba79cdf38aeb1f77aed44216988fa 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 192 213 9.8E-52 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 SYN_00928 964ba79cdf38aeb1f77aed44216988fa 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 145 168 9.8E-52 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 SYN_00928 964ba79cdf38aeb1f77aed44216988fa 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 54 74 9.8E-52 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 SYN_00928 964ba79cdf38aeb1f77aed44216988fa 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 76 92 9.8E-52 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 SYN_02067 93479f08b4270cf183eb0da0fe63a902 216 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 41 204 9.0E-43 T 11-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component SYN_02067 93479f08b4270cf183eb0da0fe63a902 216 Gene3D G3DSA:3.40.50.10610 31 214 2.8E-6 T 11-10-2018 SYN_02067 93479f08b4270cf183eb0da0fe63a902 216 SUPERFAMILY SSF159594 39 209 1.26E-28 T 11-10-2018 SYN_01662 00f5df59e560c5b1f2016c0faf422b35 300 SMART SM00900 163 280 4.6E-14 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 SYN_01662 00f5df59e560c5b1f2016c0faf422b35 300 Pfam PF04205 FMN-binding domain 163 277 9.0E-12 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 SYN_01069 830e481fb82793acdfaaca66b6d14fdc 501 Pfam PF02446 4-alpha-glucanotransferase 11 478 1.5E-157 T 11-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 SYN_01069 830e481fb82793acdfaaca66b6d14fdc 501 Gene3D G3DSA:3.20.20.80 2 501 6.4E-186 T 11-10-2018 SYN_01069 830e481fb82793acdfaaca66b6d14fdc 501 SUPERFAMILY SSF51445 5 500 1.3E-174 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily SYN_01069 830e481fb82793acdfaaca66b6d14fdc 501 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 2 500 3.4E-117 T 11-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 SYN_02985 401fc4e22b5f21a4e88a3fc59b468fb5 329 Gene3D G3DSA:3.40.50.300 5 169 6.0E-55 T 11-10-2018 SYN_02985 401fc4e22b5f21a4e88a3fc59b468fb5 329 SUPERFAMILY SSF52540 8 208 1.97E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02985 401fc4e22b5f21a4e88a3fc59b468fb5 329 Pfam PF13177 DNA polymerase III, delta subunit 14 171 2.2E-54 T 11-10-2018 SYN_02985 401fc4e22b5f21a4e88a3fc59b468fb5 329 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 21 205 3.5E-60 T 11-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SYN_02985 401fc4e22b5f21a4e88a3fc59b468fb5 329 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 229 326 7.4E-6 T 11-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SYN_00853 6c7e05501013af59dfecde397fdd7f75 237 Gene3D G3DSA:3.40.50.300 8 235 6.9E-59 T 11-10-2018 SYN_00853 6c7e05501013af59dfecde397fdd7f75 237 SMART SM00382 38 226 4.5E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00853 6c7e05501013af59dfecde397fdd7f75 237 Pfam PF00005 ABC transporter 29 177 8.3E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_00853 6c7e05501013af59dfecde397fdd7f75 237 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_00853 6c7e05501013af59dfecde397fdd7f75 237 SUPERFAMILY SSF52540 9 230 2.87E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00086 f14ac2cb80080c01ced1e7378e25d23b 104 Pfam PF01381 Helix-turn-helix 24 74 1.7E-5 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SYN_00086 f14ac2cb80080c01ced1e7378e25d23b 104 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 15 88 1.3E-23 T 11-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 SYN_00086 f14ac2cb80080c01ced1e7378e25d23b 104 Gene3D G3DSA:1.10.260.40 7 89 9.7E-23 T 11-10-2018 SYN_00086 f14ac2cb80080c01ced1e7378e25d23b 104 SUPERFAMILY SSF47413 17 89 7.04E-20 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 SYN_00074 265bd975b14f45cac849202a0aaa7bbe 278 Gene3D G3DSA:3.40.830.10 5 275 3.0E-70 T 11-10-2018 SYN_00074 265bd975b14f45cac849202a0aaa7bbe 278 SUPERFAMILY SSF53213 43 221 1.2E-5 T 11-10-2018 SYN_00074 265bd975b14f45cac849202a0aaa7bbe 278 TIGRFAM TIGR04336 AmmeMemoSam_B: AmmeMemoRadiSam system protein B 8 273 1.3E-89 T 11-10-2018 SYN_00074 265bd975b14f45cac849202a0aaa7bbe 278 Hamap MF_00055 MEMO1 family protein . 6 274 50.615 T 11-10-2018 IPR002737 MEMO1 family Reactome: R-HSA-6785631 SYN_00074 265bd975b14f45cac849202a0aaa7bbe 278 Pfam PF01875 Memo-like protein 11 272 4.5E-64 T 11-10-2018 IPR002737 MEMO1 family Reactome: R-HSA-6785631 SYN_00902 b2780df3a05ae39db2b2669571841b3d 240 SUPERFAMILY SSF55666 154 237 2.75E-25 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 SYN_00902 b2780df3a05ae39db2b2669571841b3d 240 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 11-10-2018 IPR018336 Ribonuclease PH, conserved site SYN_00902 b2780df3a05ae39db2b2669571841b3d 240 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 4.5E-112 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 SYN_00902 b2780df3a05ae39db2b2669571841b3d 240 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 43.69 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 SYN_00902 b2780df3a05ae39db2b2669571841b3d 240 Pfam PF01138 3' exoribonuclease family, domain 1 10 139 2.1E-23 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 SYN_00902 b2780df3a05ae39db2b2669571841b3d 240 Gene3D G3DSA:3.30.230.70 9 237 1.5E-60 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 SYN_00902 b2780df3a05ae39db2b2669571841b3d 240 Pfam PF03725 3' exoribonuclease family, domain 2 158 221 1.2E-11 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 SYN_00902 b2780df3a05ae39db2b2669571841b3d 240 SUPERFAMILY SSF54211 1 181 9.11E-43 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SYN_00914 ffb74ed2b1746aa2159c6ff215ed1278 240 SUPERFAMILY SSF53067 1 102 4.19E-25 T 11-10-2018 SYN_00914 ffb74ed2b1746aa2159c6ff215ed1278 240 Gene3D G3DSA:3.30.420.40 4 218 6.0E-49 T 11-10-2018 SYN_00914 ffb74ed2b1746aa2159c6ff215ed1278 240 Gene3D G3DSA:3.30.420.40 95 187 6.0E-49 T 11-10-2018 SYN_00914 ffb74ed2b1746aa2159c6ff215ed1278 240 Pfam PF00814 Glycoprotease family 38 124 8.7E-21 T 11-10-2018 IPR000905 Gcp-like domain SYN_00914 ffb74ed2b1746aa2159c6ff215ed1278 240 SUPERFAMILY SSF53067 110 216 3.75E-11 T 11-10-2018 SYN_00914 ffb74ed2b1746aa2159c6ff215ed1278 240 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 4 218 1.2E-45 T 11-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 SYN_02894 2f5705aacf8bf2754432aa4a0c564a62 764 Gene3D G3DSA:2.60.40.10 180 268 9.2E-15 T 11-10-2018 IPR013783 Immunoglobulin-like fold SYN_02894 2f5705aacf8bf2754432aa4a0c564a62 764 Gene3D G3DSA:2.60.40.10 391 482 8.8E-9 T 11-10-2018 IPR013783 Immunoglobulin-like fold SYN_02894 2f5705aacf8bf2754432aa4a0c564a62 764 SUPERFAMILY SSF49265 185 365 1.56E-16 T 11-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 SYN_02894 2f5705aacf8bf2754432aa4a0c564a62 764 SUPERFAMILY SSF49265 403 567 1.64E-8 T 11-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 SYN_02894 2f5705aacf8bf2754432aa4a0c564a62 764 Gene3D G3DSA:2.60.40.10 269 375 2.4E-14 T 11-10-2018 IPR013783 Immunoglobulin-like fold SYN_02894 2f5705aacf8bf2754432aa4a0c564a62 764 SMART SM00060 581 662 1.4 T 11-10-2018 IPR003961 Fibronectin type III GO:0005515 SYN_02894 2f5705aacf8bf2754432aa4a0c564a62 764 SMART SM00060 267 368 0.0039 T 11-10-2018 IPR003961 Fibronectin type III GO:0005515 SYN_02894 2f5705aacf8bf2754432aa4a0c564a62 764 SMART SM00060 480 567 58.0 T 11-10-2018 IPR003961 Fibronectin type III GO:0005515 SYN_02894 2f5705aacf8bf2754432aa4a0c564a62 764 SMART SM00060 676 752 25.0 T 11-10-2018 IPR003961 Fibronectin type III GO:0005515 SYN_02894 2f5705aacf8bf2754432aa4a0c564a62 764 SMART SM00060 172 252 5.4 T 11-10-2018 IPR003961 Fibronectin type III GO:0005515 SYN_02894 2f5705aacf8bf2754432aa4a0c564a62 764 Gene3D G3DSA:2.60.40.10 581 675 9.7E-13 T 11-10-2018 IPR013783 Immunoglobulin-like fold SYN_02894 2f5705aacf8bf2754432aa4a0c564a62 764 Gene3D G3DSA:2.60.40.10 676 763 8.9E-10 T 11-10-2018 IPR013783 Immunoglobulin-like fold SYN_02894 2f5705aacf8bf2754432aa4a0c564a62 764 Gene3D G3DSA:2.60.40.10 483 580 4.1E-12 T 11-10-2018 IPR013783 Immunoglobulin-like fold SYN_02894 2f5705aacf8bf2754432aa4a0c564a62 764 SUPERFAMILY SSF49265 580 761 1.69E-10 T 11-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 SYN_02592 42de4b1b6db6b2a690f8e16b210650dd 249 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 5 229 29.471 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 SYN_02592 42de4b1b6db6b2a690f8e16b210650dd 249 SUPERFAMILY SSF51366 4 226 1.02E-42 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 SYN_02592 42de4b1b6db6b2a690f8e16b210650dd 249 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 7 224 3.2E-27 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 SYN_02592 42de4b1b6db6b2a690f8e16b210650dd 249 Gene3D G3DSA:3.20.20.70 3 228 5.1E-51 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_02710 c614b31c401706b0873c647448f473b2 294 Pfam PF01259 SAICAR synthetase 18 269 5.6E-99 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SYN_02710 c614b31c401706b0873c647448f473b2 294 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 14 294 25.854 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SYN_02710 c614b31c401706b0873c647448f473b2 294 ProSitePatterns PS01057 SAICAR synthetase signature 1. 108 122 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SYN_02710 c614b31c401706b0873c647448f473b2 294 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 19 293 3.9E-68 T 11-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 SYN_02710 c614b31c401706b0873c647448f473b2 294 Gene3D G3DSA:3.30.470.20 108 250 1.4E-57 T 11-10-2018 SYN_02710 c614b31c401706b0873c647448f473b2 294 Gene3D G3DSA:3.30.200.20 5 106 1.1E-34 T 11-10-2018 SYN_02710 c614b31c401706b0873c647448f473b2 294 SUPERFAMILY SSF56104 7 292 2.49E-99 T 11-10-2018 SYN_01700 656f1fb03701da48a560e0037bc24ce9 321 Gene3D G3DSA:3.30.70.250 136 206 1.0E-77 T 11-10-2018 SYN_01700 656f1fb03701da48a560e0037bc24ce9 321 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 16 314 2.7E-31 T 11-10-2018 IPR020801 Polyketide synthase, acyl transferase domain SYN_01700 656f1fb03701da48a560e0037bc24ce9 321 Gene3D G3DSA:3.40.366.10 14 297 1.0E-77 T 11-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 SYN_01700 656f1fb03701da48a560e0037bc24ce9 321 SUPERFAMILY SSF52151 14 301 4.45E-55 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase SYN_01700 656f1fb03701da48a560e0037bc24ce9 321 PIRSF PIRSF000446 10 318 7.8E-71 T 11-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 SYN_01700 656f1fb03701da48a560e0037bc24ce9 321 Pfam PF00698 Acyl transferase domain 16 229 1.5E-25 T 11-10-2018 IPR014043 Acyl transferase SYN_01700 656f1fb03701da48a560e0037bc24ce9 321 SUPERFAMILY SSF55048 138 191 3.01E-8 T 11-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding SYN_00880 f3c831586fff8dda673d959b3e531d48 395 Gene3D G3DSA:3.20.110.20 24 344 2.6E-18 T 11-10-2018 SYN_00880 f3c831586fff8dda673d959b3e531d48 395 Pfam PF03065 Glycosyl hydrolase family 57 40 322 2.0E-29 T 11-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 SYN_00880 f3c831586fff8dda673d959b3e531d48 395 SUPERFAMILY SSF88713 5 350 6.3E-42 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SYN_00592 e28b77541a9cc69d7139cc676ff946cc 256 Pfam PF00578 AhpC/TSA family 122 218 6.3E-11 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 SYN_00592 e28b77541a9cc69d7139cc676ff946cc 256 ProSitePatterns PS00194 Thioredoxin family active site. 136 154 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 SYN_00592 e28b77541a9cc69d7139cc676ff946cc 256 SUPERFAMILY SSF52833 123 232 2.55E-18 T 11-10-2018 IPR036249 Thioredoxin-like superfamily SYN_00592 e28b77541a9cc69d7139cc676ff946cc 256 Gene3D G3DSA:3.40.30.10 81 252 2.2E-20 T 11-10-2018 SYN_01999 8e54ab1f2952b2416c27bcdefe173269 314 Pfam PF04055 Radical SAM superfamily 70 233 1.0E-7 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_01999 8e54ab1f2952b2416c27bcdefe173269 314 Gene3D G3DSA:3.20.20.70 62 256 1.7E-9 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_01999 8e54ab1f2952b2416c27bcdefe173269 314 PIRSF PIRSF004869 2 306 1.2E-68 T 11-10-2018 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted SYN_01999 8e54ab1f2952b2416c27bcdefe173269 314 SUPERFAMILY SSF102114 72 307 3.53E-10 T 11-10-2018 SYN_00229 ae7d698618bf688c3379cbd714c6854a 114 SUPERFAMILY SSF52091 1 108 4.91E-26 T 11-10-2018 IPR036513 STAS domain superfamily SYN_00229 ae7d698618bf688c3379cbd714c6854a 114 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 105 1.8E-22 T 11-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 SYN_00229 ae7d698618bf688c3379cbd714c6854a 114 Pfam PF01740 STAS domain 10 106 1.8E-16 T 11-10-2018 IPR002645 STAS domain SYN_00229 ae7d698618bf688c3379cbd714c6854a 114 Gene3D G3DSA:3.30.750.24 2 111 6.3E-33 T 11-10-2018 IPR036513 STAS domain superfamily SYN_01275 2d13794aab42bab60750384dbe688ccd 254 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 53 179 2.6E-38 T 11-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 SYN_01275 2d13794aab42bab60750384dbe688ccd 254 SUPERFAMILY SSF69593 5 231 2.48E-51 T 11-10-2018 SYN_01275 2d13794aab42bab60750384dbe688ccd 254 Pfam PF01553 Acyltransferase 54 179 5.3E-31 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 SYN_01275 2d13794aab42bab60750384dbe688ccd 254 SMART SM00563 68 182 1.2E-43 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 SYN_01833 d897603783efea2771c26a062a7fca96 1158 Gene3D G3DSA:3.40.140.10 608 762 1.4E-11 T 11-10-2018 SYN_01833 d897603783efea2771c26a062a7fca96 1158 SUPERFAMILY SSF54495 62 126 2.23E-6 T 11-10-2018 IPR016135 Ubiquitin-conjugating enzyme/RWD-like SYN_01833 d897603783efea2771c26a062a7fca96 1158 SUPERFAMILY SSF69572 341 452 3.14E-21 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 SYN_01833 d897603783efea2771c26a062a7fca96 1158 Pfam PF00149 Calcineurin-like phosphoesterase 790 1100 2.8E-6 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 SYN_01833 d897603783efea2771c26a062a7fca96 1158 Gene3D G3DSA:3.40.50.720 328 577 1.0E-21 T 11-10-2018 SYN_01833 d897603783efea2771c26a062a7fca96 1158 SUPERFAMILY SSF56300 790 1139 9.93E-16 T 11-10-2018 SYN_01833 d897603783efea2771c26a062a7fca96 1158 Pfam PF14457 Prokaryotic E2 family A 52 154 2.5E-19 T 11-10-2018 IPR032865 Prokaryotic E2 family A SYN_01833 d897603783efea2771c26a062a7fca96 1158 SUPERFAMILY SSF102712 631 716 6.28E-8 T 11-10-2018 SYN_01833 d897603783efea2771c26a062a7fca96 1158 Pfam PF00899 ThiF family 342 558 5.3E-18 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SYN_01833 d897603783efea2771c26a062a7fca96 1158 Pfam PF14464 Prokaryotic homologs of the JAB domain 613 737 1.6E-18 T 11-10-2018 IPR028090 JAB domain, prokaryotic SYN_02346 74928de6dd4f2d1ada22e7b86a8ff367 293 Gene3D G3DSA:3.40.50.1820 41 292 3.0E-62 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold SYN_02346 74928de6dd4f2d1ada22e7b86a8ff367 293 Pfam PF01738 Dienelactone hydrolase family 67 289 9.9E-45 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 SYN_02346 74928de6dd4f2d1ada22e7b86a8ff367 293 SUPERFAMILY SSF53474 55 288 5.5E-44 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold SYN_00968 7943065f001eb5694db490a2d1614777 281 TIGRFAM TIGR00277 HDIG: HDIG domain 107 206 4.4E-10 T 11-10-2018 IPR006675 HDIG domain SYN_00968 7943065f001eb5694db490a2d1614777 281 SMART SM00471 103 240 1.1E-8 T 11-10-2018 IPR003607 HD/PDEase domain SYN_00968 7943065f001eb5694db490a2d1614777 281 SUPERFAMILY SSF109604 2 269 4.94E-67 T 11-10-2018 SYN_00968 7943065f001eb5694db490a2d1614777 281 Gene3D G3DSA:1.10.3210.10 1 280 2.6E-70 T 11-10-2018 SYN_00968 7943065f001eb5694db490a2d1614777 281 Pfam PF08668 HDOD domain 12 208 2.1E-54 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD SYN_02804 fce353da7cef5d1a46f74febc40c5ce4 373 Gene3D G3DSA:3.30.70.2120 167 271 7.5E-47 T 11-10-2018 SYN_02804 fce353da7cef5d1a46f74febc40c5ce4 373 Gene3D G3DSA:1.10.8.410 323 372 1.1E-24 T 11-10-2018 SYN_02804 fce353da7cef5d1a46f74febc40c5ce4 373 Gene3D G3DSA:1.20.1330.10 44 322 7.5E-47 T 11-10-2018 SYN_02804 fce353da7cef5d1a46f74febc40c5ce4 373 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 3.3E-35 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SYN_02804 fce353da7cef5d1a46f74febc40c5ce4 373 Pfam PF00700 Bacterial flagellin C-terminal helical region 288 372 8.5E-24 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 SYN_02804 fce353da7cef5d1a46f74febc40c5ce4 373 SUPERFAMILY SSF64518 1 372 8.5E-77 T 11-10-2018 SYN_02804 fce353da7cef5d1a46f74febc40c5ce4 373 PRINTS PR00207 Flagellin signature 37 54 1.8E-21 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SYN_02804 fce353da7cef5d1a46f74febc40c5ce4 373 PRINTS PR00207 Flagellin signature 110 133 1.8E-21 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SYN_02804 fce353da7cef5d1a46f74febc40c5ce4 373 PRINTS PR00207 Flagellin signature 76 95 1.8E-21 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 SYN_01314 8be6c44a806165d67621ea373957c51e 103 Pfam PF00817 impB/mucB/samB family 3 92 2.0E-26 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 SYN_01314 8be6c44a806165d67621ea373957c51e 103 Gene3D G3DSA:3.30.70.270 50 96 2.2E-10 T 11-10-2018 SYN_01314 8be6c44a806165d67621ea373957c51e 103 SUPERFAMILY SSF56672 3 92 8.9E-28 T 11-10-2018 SYN_01314 8be6c44a806165d67621ea373957c51e 103 Gene3D G3DSA:2.30.40.20 3 49 2.1E-15 T 11-10-2018 SYN_00955 e32ffd3630e9ac32572614067a439170 258 Pfam PF00005 ABC transporter 21 170 1.7E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_00955 e32ffd3630e9ac32572614067a439170 258 SUPERFAMILY SSF52540 5 230 3.07E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00955 e32ffd3630e9ac32572614067a439170 258 SMART SM00382 30 218 2.1E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00955 e32ffd3630e9ac32572614067a439170 258 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_00955 e32ffd3630e9ac32572614067a439170 258 Gene3D G3DSA:3.40.50.300 3 252 3.4E-65 T 11-10-2018 SYN_01836 d22808d49122d00b73c5240ea2a42ca3 322 SUPERFAMILY SSF53067 165 315 4.75E-22 T 11-10-2018 SYN_01836 d22808d49122d00b73c5240ea2a42ca3 322 SUPERFAMILY SSF53067 3 155 6.47E-21 T 11-10-2018 SYN_01836 d22808d49122d00b73c5240ea2a42ca3 322 Gene3D G3DSA:3.30.420.40 162 299 5.4E-42 T 11-10-2018 SYN_01836 d22808d49122d00b73c5240ea2a42ca3 322 Gene3D G3DSA:3.30.420.40 6 312 5.4E-42 T 11-10-2018 SYN_00568 885e2a91f522093bb64c4bb23c940afd 649 Pfam PF00512 His Kinase A (phospho-acceptor) domain 278 340 5.6E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_00568 885e2a91f522093bb64c4bb23c940afd 649 SUPERFAMILY SSF47384 270 340 1.37E-10 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SYN_00568 885e2a91f522093bb64c4bb23c940afd 649 Gene3D G3DSA:3.30.565.10 344 517 1.2E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_00568 885e2a91f522093bb64c4bb23c940afd 649 SUPERFAMILY SSF52172 531 648 8.54E-29 T 11-10-2018 IPR011006 CheY-like superfamily SYN_00568 885e2a91f522093bb64c4bb23c940afd 649 SMART SM00387 388 511 2.1E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_00568 885e2a91f522093bb64c4bb23c940afd 649 PRINTS PR00344 Bacterial sensor protein C-terminal signature 495 508 3.2E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_00568 885e2a91f522093bb64c4bb23c940afd 649 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 453 3.2E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_00568 885e2a91f522093bb64c4bb23c940afd 649 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 489 3.2E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_00568 885e2a91f522093bb64c4bb23c940afd 649 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 467 3.2E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_00568 885e2a91f522093bb64c4bb23c940afd 649 Pfam PF08447 PAS fold 27 116 4.6E-26 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 SYN_00568 885e2a91f522093bb64c4bb23c940afd 649 Gene3D G3DSA:3.40.50.2300 530 649 1.4E-27 T 11-10-2018 SYN_00568 885e2a91f522093bb64c4bb23c940afd 649 Gene3D G3DSA:1.10.287.130 265 341 1.3E-17 T 11-10-2018 SYN_00568 885e2a91f522093bb64c4bb23c940afd 649 SMART SM00448 531 643 3.5E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00568 885e2a91f522093bb64c4bb23c940afd 649 SUPERFAMILY SSF55785 118 255 8.22E-20 T 11-10-2018 IPR035965 PAS domain superfamily SYN_00568 885e2a91f522093bb64c4bb23c940afd 649 SMART SM00086 79 122 1.2E-9 T 11-10-2018 IPR001610 PAC motif SYN_00568 885e2a91f522093bb64c4bb23c940afd 649 Pfam PF00072 Response regulator receiver domain 533 640 2.9E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00568 885e2a91f522093bb64c4bb23c940afd 649 Gene3D G3DSA:3.30.450.20 15 125 6.9E-27 T 11-10-2018 SYN_00568 885e2a91f522093bb64c4bb23c940afd 649 SUPERFAMILY SSF55874 333 511 1.24E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_00568 885e2a91f522093bb64c4bb23c940afd 649 Pfam PF08448 PAS fold 143 263 6.2E-10 T 11-10-2018 IPR013656 PAS fold-4 SYN_00568 885e2a91f522093bb64c4bb23c940afd 649 Gene3D G3DSA:3.30.450.20 140 264 1.0E-22 T 11-10-2018 SYN_00568 885e2a91f522093bb64c4bb23c940afd 649 SUPERFAMILY SSF55785 4 123 3.22E-21 T 11-10-2018 IPR035965 PAS domain superfamily SYN_00568 885e2a91f522093bb64c4bb23c940afd 649 SMART SM00388 277 343 8.0E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_00568 885e2a91f522093bb64c4bb23c940afd 649 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 30 129 5.2E-11 T 11-10-2018 IPR000014 PAS domain SYN_00568 885e2a91f522093bb64c4bb23c940afd 649 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 130 229 8.8E-11 T 11-10-2018 IPR000014 PAS domain SYN_00568 885e2a91f522093bb64c4bb23c940afd 649 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 389 510 6.2E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_00568 885e2a91f522093bb64c4bb23c940afd 649 SMART SM00091 2 72 20.0 T 11-10-2018 IPR000014 PAS domain SYN_00568 885e2a91f522093bb64c4bb23c940afd 649 SMART SM00091 134 200 4.9E-8 T 11-10-2018 IPR000014 PAS domain SYN_00912 7f4251fc4cc6a2bf2b8e7122afb8e6a0 254 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 60 82 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SYN_00912 7f4251fc4cc6a2bf2b8e7122afb8e6a0 254 Pfam PF01066 CDP-alcohol phosphatidyltransferase 19 82 2.4E-14 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SYN_00912 7f4251fc4cc6a2bf2b8e7122afb8e6a0 254 Gene3D G3DSA:1.20.120.1760 10 158 1.3E-13 T 11-10-2018 SYN_00912 7f4251fc4cc6a2bf2b8e7122afb8e6a0 254 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 25 186 1.1E-43 T 11-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 SYN_00850 008e46f05ee5fc79b6b5bd93f79e51c8 236 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 4.2E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SYN_00850 008e46f05ee5fc79b6b5bd93f79e51c8 236 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 4.2E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SYN_00850 008e46f05ee5fc79b6b5bd93f79e51c8 236 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 2.0E-14 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SYN_00850 008e46f05ee5fc79b6b5bd93f79e51c8 236 Gene3D G3DSA:1.10.357.10 57 212 7.1E-9 T 11-10-2018 SYN_00850 008e46f05ee5fc79b6b5bd93f79e51c8 236 SUPERFAMILY SSF46689 4 70 4.21E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SYN_00850 008e46f05ee5fc79b6b5bd93f79e51c8 236 Gene3D G3DSA:1.10.10.60 5 56 2.1E-20 T 11-10-2018 SYN_00850 008e46f05ee5fc79b6b5bd93f79e51c8 236 SUPERFAMILY SSF48498 81 208 1.78E-14 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily SYN_00850 008e46f05ee5fc79b6b5bd93f79e51c8 236 Pfam PF09209 Domain of unknown function (DUF1956) 85 206 4.1E-34 T 11-10-2018 IPR015292 Transcription regulator YbiH, C-terminal SYN_03689 79f2b997ba43b12904a0e4a7c85c0b86 116 Gene3D G3DSA:3.40.630.30 3 115 8.9E-12 T 11-10-2018 SYN_02782 97f50714b6faade9c94df2e31b353db3 204 SUPERFAMILY SSF47781 140 201 1.11E-20 T 11-10-2018 IPR010994 RuvA domain 2-like SYN_02782 97f50714b6faade9c94df2e31b353db3 204 Gene3D G3DSA:1.10.150.320 127 200 3.7E-19 T 11-10-2018 SYN_02782 97f50714b6faade9c94df2e31b353db3 204 SMART SM00278 149 168 0.0033 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SYN_02782 97f50714b6faade9c94df2e31b353db3 204 SMART SM00278 179 198 470.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SYN_02782 97f50714b6faade9c94df2e31b353db3 204 Pfam PF12836 Helix-hairpin-helix motif 140 200 1.7E-20 T 11-10-2018 SYN_01260 d7814500a2ff6ed39de3c7991e1bf73f 392 Pfam PF00561 alpha/beta hydrolase fold 69 374 5.9E-34 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 SYN_01260 d7814500a2ff6ed39de3c7991e1bf73f 392 PIRSF PIRSF000443 16 392 4.3E-145 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 SYN_01260 d7814500a2ff6ed39de3c7991e1bf73f 392 Gene3D G3DSA:3.40.50.1820 44 375 1.6E-143 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold SYN_01260 d7814500a2ff6ed39de3c7991e1bf73f 392 SUPERFAMILY SSF53474 40 387 9.04E-104 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold SYN_01260 d7814500a2ff6ed39de3c7991e1bf73f 392 Gene3D G3DSA:1.10.1740.110 204 308 1.6E-143 T 11-10-2018 SYN_01260 d7814500a2ff6ed39de3c7991e1bf73f 392 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 29 387 32.406 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 SYN_01260 d7814500a2ff6ed39de3c7991e1bf73f 392 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 40 386 3.2E-136 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 SYN_01808 252b996681da14e8efbbad355ba8bda9 503 SUPERFAMILY SSF47384 270 343 6.87E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SYN_01808 252b996681da14e8efbbad355ba8bda9 503 Pfam PF00672 HAMP domain 194 239 3.3E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SYN_01808 252b996681da14e8efbbad355ba8bda9 503 SUPERFAMILY SSF158472 192 241 8.5E-9 T 11-10-2018 SYN_01808 252b996681da14e8efbbad355ba8bda9 503 SMART SM00388 278 344 3.4E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_01808 252b996681da14e8efbbad355ba8bda9 503 SUPERFAMILY SSF55874 334 494 1.07E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_01808 252b996681da14e8efbbad355ba8bda9 503 Gene3D G3DSA:1.10.287.130 263 341 1.2E-13 T 11-10-2018 SYN_01808 252b996681da14e8efbbad355ba8bda9 503 Pfam PF00512 His Kinase A (phospho-acceptor) domain 279 341 2.4E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_01808 252b996681da14e8efbbad355ba8bda9 503 SMART SM00304 191 243 5.7E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 SYN_01808 252b996681da14e8efbbad355ba8bda9 503 Gene3D G3DSA:3.30.565.10 347 499 4.6E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_01808 252b996681da14e8efbbad355ba8bda9 503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 453 9.6E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01808 252b996681da14e8efbbad355ba8bda9 503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 474 9.6E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01808 252b996681da14e8efbbad355ba8bda9 503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 439 9.6E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01808 252b996681da14e8efbbad355ba8bda9 503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 493 9.6E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01808 252b996681da14e8efbbad355ba8bda9 503 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 389 493 1.5E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_01808 252b996681da14e8efbbad355ba8bda9 503 SMART SM00387 386 496 1.5E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_01808 252b996681da14e8efbbad355ba8bda9 503 Gene3D G3DSA:1.20.1480.50 155 249 9.7E-7 T 11-10-2018 SYN_03718 0aa7cc33ee8a67d23caf87df35b64c29 44 Pfam PF04723 Glycine reductase complex selenoprotein A 5 44 1.7E-15 T 11-10-2018 IPR006812 Glycine reductase complex selenoprotein A GO:0030699|GO:0030700|GO:0050485|GO:0055114 SYN_03109 f7dea9e438fd760d1e88fc8937259b13 237 Pfam PF01634 ATP phosphoribosyltransferase 2 158 2.6E-40 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 SYN_03109 f7dea9e438fd760d1e88fc8937259b13 237 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 137 237 3.1E-31 T 11-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 SYN_03109 f7dea9e438fd760d1e88fc8937259b13 237 SUPERFAMILY SSF54913 166 237 3.0E-18 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta SYN_03109 f7dea9e438fd760d1e88fc8937259b13 237 SUPERFAMILY SSF53850 2 162 8.89E-43 T 11-10-2018 SYN_03109 f7dea9e438fd760d1e88fc8937259b13 237 Gene3D G3DSA:3.30.70.120 168 237 4.4E-18 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SYN_03109 f7dea9e438fd760d1e88fc8937259b13 237 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 2 136 1.1E-34 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 SYN_03109 f7dea9e438fd760d1e88fc8937259b13 237 Gene3D G3DSA:3.40.190.10 1 48 1.1E-6 T 11-10-2018 SYN_03109 f7dea9e438fd760d1e88fc8937259b13 237 Gene3D G3DSA:3.40.190.10 49 128 1.8E-17 T 11-10-2018 SYN_03109 f7dea9e438fd760d1e88fc8937259b13 237 Pfam PF08029 HisG, C-terminal domain 163 235 1.4E-21 T 11-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 SYN_03254 82d2f1076089d4d0913f74dfd134bbb8 62 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_03254 82d2f1076089d4d0913f74dfd134bbb8 62 Gene3D G3DSA:2.40.50.140 1 62 5.7E-24 T 11-10-2018 SYN_03254 82d2f1076089d4d0913f74dfd134bbb8 62 PRINTS PR01034 Ribosomal protein S12 signature 42 57 5.5E-16 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_03254 82d2f1076089d4d0913f74dfd134bbb8 62 PRINTS PR01034 Ribosomal protein S12 signature 27 42 5.5E-16 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_03254 82d2f1076089d4d0913f74dfd134bbb8 62 SUPERFAMILY SSF50249 2 59 8.48E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_03254 82d2f1076089d4d0913f74dfd134bbb8 62 Pfam PF00164 Ribosomal protein S12/S23 15 58 2.0E-16 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_01548 8bd9706c883077f59ce5ecc1ed58fc24 601 Gene3D G3DSA:3.30.1370.120 239 314 5.0E-18 T 11-10-2018 IPR038591 NolW-like superfamily SYN_01548 8bd9706c883077f59ce5ecc1ed58fc24 601 Gene3D G3DSA:3.30.1370.120 71 232 1.4E-53 T 11-10-2018 IPR038591 NolW-like superfamily SYN_01548 8bd9706c883077f59ce5ecc1ed58fc24 601 Pfam PF00263 Bacterial type II and III secretion system protein 407 568 4.7E-55 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 SYN_01548 8bd9706c883077f59ce5ecc1ed58fc24 601 Pfam PF03958 Bacterial type II/III secretion system short domain 240 315 3.4E-16 T 11-10-2018 IPR005644 NolW-like SYN_01548 8bd9706c883077f59ce5ecc1ed58fc24 601 Pfam PF03958 Bacterial type II/III secretion system short domain 174 231 8.6E-7 T 11-10-2018 IPR005644 NolW-like SYN_01548 8bd9706c883077f59ce5ecc1ed58fc24 601 PRINTS PR00811 Bacterial general secretion pathway protein D signature 555 569 8.2E-28 T 11-10-2018 IPR001775 GspD/PilQ family SYN_01548 8bd9706c883077f59ce5ecc1ed58fc24 601 PRINTS PR00811 Bacterial general secretion pathway protein D signature 532 550 8.2E-28 T 11-10-2018 IPR001775 GspD/PilQ family SYN_01548 8bd9706c883077f59ce5ecc1ed58fc24 601 PRINTS PR00811 Bacterial general secretion pathway protein D signature 438 448 8.2E-28 T 11-10-2018 IPR001775 GspD/PilQ family SYN_01548 8bd9706c883077f59ce5ecc1ed58fc24 601 PRINTS PR00811 Bacterial general secretion pathway protein D signature 316 326 8.2E-28 T 11-10-2018 IPR001775 GspD/PilQ family SYN_01548 8bd9706c883077f59ce5ecc1ed58fc24 601 PRINTS PR00811 Bacterial general secretion pathway protein D signature 403 427 8.2E-28 T 11-10-2018 IPR001775 GspD/PilQ family SYN_00195 faf2c1367955d328944d54806cad733b 270 PIRSF PIRSF006779 5 265 3.6E-85 T 11-10-2018 IPR002747 SAM-dependent chlorinase/fluorinase SYN_00195 faf2c1367955d328944d54806cad733b 270 SUPERFAMILY SSF102522 8 168 5.36E-62 T 11-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal SYN_00195 faf2c1367955d328944d54806cad733b 270 Gene3D G3DSA:2.40.30.90 173 263 1.7E-24 T 11-10-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal SYN_00195 faf2c1367955d328944d54806cad733b 270 SUPERFAMILY SSF101852 174 263 8.24E-21 T 11-10-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal SYN_00195 faf2c1367955d328944d54806cad733b 270 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 10 260 5.7E-86 T 11-10-2018 IPR002747 SAM-dependent chlorinase/fluorinase SYN_00195 faf2c1367955d328944d54806cad733b 270 Gene3D G3DSA:3.40.50.10790 93 169 2.1E-24 T 11-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal SYN_00195 faf2c1367955d328944d54806cad733b 270 Gene3D G3DSA:3.40.50.10790 1 92 1.4E-38 T 11-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal SYN_03754 2f8de970b21b8cc5fbe6afc6480e3fc0 42 SUPERFAMILY SSF82649 2 40 1.26E-10 T 11-10-2018 SYN_03754 2f8de970b21b8cc5fbe6afc6480e3fc0 42 Pfam PF01592 NifU-like N terminal domain 5 40 3.9E-9 T 11-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 SYN_03754 2f8de970b21b8cc5fbe6afc6480e3fc0 42 Gene3D G3DSA:3.90.1010.10 1 42 2.9E-12 T 11-10-2018 SYN_00472 35d4baffc5c256ba02dcd90458f06645 342 Gene3D G3DSA:2.60.20.10 242 342 4.2E-11 T 11-10-2018 SYN_02643 ea3675959e029e993a5411b430f0a7a0 500 Gene3D G3DSA:3.30.300.30 408 490 4.2E-19 T 11-10-2018 SYN_02643 ea3675959e029e993a5411b430f0a7a0 500 Pfam PF00501 AMP-binding enzyme 8 413 2.4E-106 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 SYN_02643 ea3675959e029e993a5411b430f0a7a0 500 Pfam PF13193 AMP-binding enzyme C-terminal domain 422 491 6.9E-12 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain SYN_02643 ea3675959e029e993a5411b430f0a7a0 500 Gene3D G3DSA:3.40.50.12780 1 406 7.5E-127 T 11-10-2018 SYN_02643 ea3675959e029e993a5411b430f0a7a0 500 SUPERFAMILY SSF56801 2 490 1.19E-146 T 11-10-2018 SYN_00583 279333a9d1ef02e2d51c373ba1e1c913 432 SUPERFAMILY SSF53383 3 426 3.09E-129 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SYN_00583 279333a9d1ef02e2d51c373ba1e1c913 432 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 428 104.963 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 SYN_00583 279333a9d1ef02e2d51c373ba1e1c913 432 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 427 2.1E-188 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 SYN_00583 279333a9d1ef02e2d51c373ba1e1c913 432 Gene3D G3DSA:3.90.1150.10 9 422 2.0E-174 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SYN_00583 279333a9d1ef02e2d51c373ba1e1c913 432 Pfam PF00202 Aminotransferase class-III 34 422 3.8E-71 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SYN_00583 279333a9d1ef02e2d51c373ba1e1c913 432 Gene3D G3DSA:3.40.640.10 71 318 2.0E-174 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SYN_00583 279333a9d1ef02e2d51c373ba1e1c913 432 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 236 272 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SYN_02523 805fab3af694fb2c4578322e66bde6e3 227 SUPERFAMILY SSF57802 184 226 6.59E-12 T 11-10-2018 SYN_02523 805fab3af694fb2c4578322e66bde6e3 227 Gene3D G3DSA:1.20.1260.10 37 182 5.5E-58 T 11-10-2018 IPR012347 Ferritin-like SYN_02523 805fab3af694fb2c4578322e66bde6e3 227 Pfam PF02915 Rubrerythrin 48 175 4.5E-30 T 11-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 SYN_02523 805fab3af694fb2c4578322e66bde6e3 227 Gene3D G3DSA:2.20.28.10 183 227 2.7E-20 T 11-10-2018 SYN_02523 805fab3af694fb2c4578322e66bde6e3 227 SUPERFAMILY SSF47240 40 183 2.42E-41 T 11-10-2018 IPR009078 Ferritin-like superfamily SYN_00483 019ea77b81a9e459630b27ffde701718 917 SMART SM00491 781 911 5.1E-24 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 SYN_00483 019ea77b81a9e459630b27ffde701718 917 SUPERFAMILY SSF52540 232 906 4.48E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00483 019ea77b81a9e459630b27ffde701718 917 Gene3D G3DSA:3.40.50.300 265 536 1.1E-32 T 11-10-2018 SYN_00483 019ea77b81a9e459630b27ffde701718 917 Gene3D G3DSA:3.40.50.300 738 917 8.4E-34 T 11-10-2018 SYN_00483 019ea77b81a9e459630b27ffde701718 917 Pfam PF13307 Helicase C-terminal domain 765 910 3.4E-28 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 SYN_02667 788f729eeafff54ea52e724f6be25d78 376 Gene3D G3DSA:3.40.50.2000 181 357 4.0E-57 T 11-10-2018 SYN_02667 788f729eeafff54ea52e724f6be25d78 376 Pfam PF13692 Glycosyl transferases group 1 196 337 8.1E-28 T 11-10-2018 SYN_02667 788f729eeafff54ea52e724f6be25d78 376 SUPERFAMILY SSF53756 21 375 4.54E-67 T 11-10-2018 SYN_02667 788f729eeafff54ea52e724f6be25d78 376 Gene3D G3DSA:3.40.50.2000 25 370 4.0E-57 T 11-10-2018 SYN_02667 788f729eeafff54ea52e724f6be25d78 376 Pfam PF13477 Glycosyl transferase 4-like 5 141 4.4E-30 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 SYN_00630 15bd9aef21d3c2ae5d247bdd095d65a7 349 Gene3D G3DSA:2.20.25.90 217 271 5.9E-23 T 11-10-2018 SYN_00630 15bd9aef21d3c2ae5d247bdd095d65a7 349 Gene3D G3DSA:3.30.70.20 124 206 7.6E-24 T 11-10-2018 SYN_00630 15bd9aef21d3c2ae5d247bdd095d65a7 349 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 222 240 - T 11-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 SYN_00630 15bd9aef21d3c2ae5d247bdd095d65a7 349 SMART SM00926 217 271 1.9E-21 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00630 15bd9aef21d3c2ae5d247bdd095d65a7 349 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 218 271 2.4E-19 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00630 15bd9aef21d3c2ae5d247bdd095d65a7 349 Gene3D G3DSA:3.10.20.740 1 121 2.1E-37 T 11-10-2018 SYN_00630 15bd9aef21d3c2ae5d247bdd095d65a7 349 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 188 199 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_00630 15bd9aef21d3c2ae5d247bdd095d65a7 349 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 30 47 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00630 15bd9aef21d3c2ae5d247bdd095d65a7 349 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 82 119 9.5E-14 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00630 15bd9aef21d3c2ae5d247bdd095d65a7 349 Gene3D G3DSA:3.40.50.740 275 349 1.6E-26 T 11-10-2018 SYN_00630 15bd9aef21d3c2ae5d247bdd095d65a7 349 Pfam PF00384 Molybdopterin oxidoreductase 274 348 1.6E-15 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00630 15bd9aef21d3c2ae5d247bdd095d65a7 349 SMART SM00929 82 122 6.5E-15 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00630 15bd9aef21d3c2ae5d247bdd095d65a7 349 Pfam PF12838 4Fe-4S dicluster domain 144 202 9.1E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_00630 15bd9aef21d3c2ae5d247bdd095d65a7 349 SUPERFAMILY SSF54292 2 73 5.99E-20 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 SYN_00630 15bd9aef21d3c2ae5d247bdd095d65a7 349 SUPERFAMILY SSF53706 186 348 3.4E-62 T 11-10-2018 SYN_00630 15bd9aef21d3c2ae5d247bdd095d65a7 349 SUPERFAMILY SSF54862 74 211 1.38E-34 T 11-10-2018 SYN_00630 15bd9aef21d3c2ae5d247bdd095d65a7 349 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 75 1.1E-18 T 11-10-2018 SYN_02427 a4e4c13317edc90209432aa4add96fc8 194 SUPERFAMILY SSF54862 116 182 3.29E-11 T 11-10-2018 SYN_02427 a4e4c13317edc90209432aa4add96fc8 194 Gene3D G3DSA:3.10.20.740 4 117 1.6E-31 T 11-10-2018 SYN_02427 a4e4c13317edc90209432aa4add96fc8 194 Pfam PF12838 4Fe-4S dicluster domain 125 180 8.8E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_02427 a4e4c13317edc90209432aa4add96fc8 194 Gene3D G3DSA:3.30.70.20 118 193 1.2E-8 T 11-10-2018 SYN_02427 a4e4c13317edc90209432aa4add96fc8 194 SUPERFAMILY SSF54292 4 119 2.35E-29 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 SYN_02427 a4e4c13317edc90209432aa4add96fc8 194 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 166 177 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_02427 a4e4c13317edc90209432aa4add96fc8 194 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 4 80 1.2E-17 T 11-10-2018 SYN_03790 2ba9d6862943df119c5f27b02216e723 130 ProSitePatterns PS00171 Triosephosphate isomerase active site. 45 55 - T 11-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_03790 2ba9d6862943df119c5f27b02216e723 130 Pfam PF00121 Triosephosphate isomerase 1 127 1.6E-50 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_03790 2ba9d6862943df119c5f27b02216e723 130 SUPERFAMILY SSF51351 1 127 1.44E-49 T 11-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_03790 2ba9d6862943df119c5f27b02216e723 130 Gene3D G3DSA:3.20.20.70 1 129 8.5E-52 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_01184 51c2f8e8e616055418af91aa5ea8d0c0 181 Gene3D G3DSA:3.50.20.10 1 180 1.1E-41 T 11-10-2018 IPR016105 Pyruvoyl-dependent histidine/arginine decarboxylase, 3-layer sandwich domain GO:0006520|GO:0016831 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SYN_01184 51c2f8e8e616055418af91aa5ea8d0c0 181 PIRSF PIRSF005216 1 180 3.2E-66 T 11-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SYN_01184 51c2f8e8e616055418af91aa5ea8d0c0 181 ProDom PD010449 DECARBOXYLASE PYRUVOYL-DEPENDENT ARGININE SUBUNIT ALPHA CONTAINS: BETA PVLARGDC LYA DECARBOX 4 127 4.0E-33 T 11-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SYN_01184 51c2f8e8e616055418af91aa5ea8d0c0 181 Hamap MF_01404 Pyruvoyl-dependent arginine decarboxylase [pdaD]. 1 181 88.168 T 11-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SYN_01184 51c2f8e8e616055418af91aa5ea8d0c0 181 SUPERFAMILY SSF56271 2 160 9.94E-47 T 11-10-2018 IPR016104 Pyruvoyl-dependent histidine/arginine decarboxylase GO:0006520|GO:0016831 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SYN_01184 51c2f8e8e616055418af91aa5ea8d0c0 181 TIGRFAM TIGR00286 TIGR00286: arginine decarboxylase, pyruvoyl-dependent 3 133 2.9E-41 T 11-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SYN_01184 51c2f8e8e616055418af91aa5ea8d0c0 181 Pfam PF01862 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) 3 179 1.5E-59 T 11-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SYN_02840 dcb67282a56352575be2286506bcce99 220 Pfam PF13861 FlgD Tudor-like domain 85 211 2.9E-8 T 11-10-2018 IPR025963 FlgD Tudor-like domain SYN_02840 dcb67282a56352575be2286506bcce99 220 Gene3D G3DSA:2.30.30.910 85 204 3.6E-19 T 11-10-2018 SYN_02840 dcb67282a56352575be2286506bcce99 220 Pfam PF13860 FlgD Ig-like domain 104 172 7.4E-15 T 11-10-2018 IPR025965 FlgD Ig-like domain SYN_02840 dcb67282a56352575be2286506bcce99 220 Gene3D G3DSA:2.60.40.4070 101 182 3.6E-19 T 11-10-2018 SYN_02840 dcb67282a56352575be2286506bcce99 220 Pfam PF03963 Flagellar hook capping protein - N-terminal region 10 73 1.6E-20 T 11-10-2018 IPR005648 Flagellar hook capping protein SYN_01823 88bfffa937017097bf44b10452e32f61 475 Pfam PF13289 SIR2-like domain 234 403 1.0E-10 T 11-10-2018 IPR039444 SIR2-like domain SYN_01719 08a60f5a655ecd0a7a87359ade2d824d 65 SUPERFAMILY SSF143034 2 64 8.37E-24 T 11-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01719 08a60f5a655ecd0a7a87359ade2d824d 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 11-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_01719 08a60f5a655ecd0a7a87359ade2d824d 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 9.4E-27 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SYN_01719 08a60f5a655ecd0a7a87359ade2d824d 65 Gene3D G3DSA:2.40.50.530 1 64 4.2E-25 T 11-10-2018 SYN_01719 08a60f5a655ecd0a7a87359ade2d824d 65 Pfam PF01632 Ribosomal protein L35 2 61 9.0E-26 T 11-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01719 08a60f5a655ecd0a7a87359ade2d824d 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 2.3E-21 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SYN_01719 08a60f5a655ecd0a7a87359ade2d824d 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 2.3E-21 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SYN_01719 08a60f5a655ecd0a7a87359ade2d824d 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 2.3E-21 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SYN_01719 08a60f5a655ecd0a7a87359ade2d824d 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 19.509 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SYN_00716 826c1cde9d02c9001fdbf79444d3d5e9 277 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 117 147 1.9E-12 T 11-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 SYN_00716 826c1cde9d02c9001fdbf79444d3d5e9 277 Gene3D G3DSA:3.90.79.10 149 275 1.2E-35 T 11-10-2018 SYN_00716 826c1cde9d02c9001fdbf79444d3d5e9 277 PRINTS PR00502 NUDIX hydrolase family signature 177 191 4.6E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 SYN_00716 826c1cde9d02c9001fdbf79444d3d5e9 277 PRINTS PR00502 NUDIX hydrolase family signature 191 206 4.6E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 SYN_00716 826c1cde9d02c9001fdbf79444d3d5e9 277 SUPERFAMILY SSF55811 104 261 3.66E-39 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 SYN_00716 826c1cde9d02c9001fdbf79444d3d5e9 277 Gene3D G3DSA:3.90.79.20 4 148 1.7E-17 T 11-10-2018 SYN_00716 826c1cde9d02c9001fdbf79444d3d5e9 277 ProSitePatterns PS00893 Nudix box signature. 182 203 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SYN_00716 826c1cde9d02c9001fdbf79444d3d5e9 277 Pfam PF00293 NUDIX domain 153 261 1.3E-16 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 SYN_00633 cd5636a984bc9c695b361f511f9176f2 265 Gene3D G3DSA:1.20.5.480 217 262 3.6E-6 T 11-10-2018 IPR038384 Formate dehydrogenase, C-terminal domain superfamily SYN_00633 cd5636a984bc9c695b361f511f9176f2 265 Pfam PF09163 Formate dehydrogenase N, transmembrane 220 257 6.5E-13 T 11-10-2018 IPR015246 Formate dehydrogenase, transmembrane SYN_00633 cd5636a984bc9c695b361f511f9176f2 265 Pfam PF13247 4Fe-4S dicluster domain 68 162 1.9E-25 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_00633 cd5636a984bc9c695b361f511f9176f2 265 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 108 119 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_00633 cd5636a984bc9c695b361f511f9176f2 265 Gene3D G3DSA:3.30.70.20 78 136 3.5E-67 T 11-10-2018 SYN_00633 cd5636a984bc9c695b361f511f9176f2 265 Gene3D G3DSA:3.30.70.20 8 179 3.5E-67 T 11-10-2018 SYN_00633 cd5636a984bc9c695b361f511f9176f2 265 SUPERFAMILY SSF81597 216 257 2.75E-8 T 11-10-2018 SYN_00633 cd5636a984bc9c695b361f511f9176f2 265 PIRSF PIRSF036298 1 264 2.5E-93 T 11-10-2018 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 SYN_00633 cd5636a984bc9c695b361f511f9176f2 265 SUPERFAMILY SSF54862 3 217 9.42E-63 T 11-10-2018 SYN_02458 31478cb659e771bd8d35483418bcc26e 79 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 5 60 2.6E-23 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SYN_02458 31478cb659e771bd8d35483418bcc26e 79 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 44 3.0E-9 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SYN_02458 31478cb659e771bd8d35483418bcc26e 79 Gene3D G3DSA:1.10.287.1040 1 77 4.0E-25 T 11-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 SYN_02458 31478cb659e771bd8d35483418bcc26e 79 Pfam PF02609 Exonuclease VII small subunit 6 56 2.0E-21 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SYN_02458 31478cb659e771bd8d35483418bcc26e 79 SUPERFAMILY SSF116842 2 64 1.57E-20 T 11-10-2018 SYN_02458 31478cb659e771bd8d35483418bcc26e 79 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 5 65 15.571 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SYN_02458 31478cb659e771bd8d35483418bcc26e 79 PIRSF PIRSF006488 1 77 2.3E-22 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SYN_02153 8cb9d7b5f1592e9ac22fd095bc7234a9 460 SMART SM00382 51 349 1.0E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_02153 8cb9d7b5f1592e9ac22fd095bc7234a9 460 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 6 460 4.0E-192 T 11-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 SYN_02153 8cb9d7b5f1592e9ac22fd095bc7234a9 460 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 3 460 42.073 T 11-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 SYN_02153 8cb9d7b5f1592e9ac22fd095bc7234a9 460 Gene3D G3DSA:1.10.8.60 352 457 1.2E-38 T 11-10-2018 SYN_02153 8cb9d7b5f1592e9ac22fd095bc7234a9 460 Pfam PF07724 AAA domain (Cdc48 subfamily) 54 118 1.4E-5 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 SYN_02153 8cb9d7b5f1592e9ac22fd095bc7234a9 460 Pfam PF07724 AAA domain (Cdc48 subfamily) 216 346 2.8E-37 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 SYN_02153 8cb9d7b5f1592e9ac22fd095bc7234a9 460 SUPERFAMILY SSF52540 6 458 1.01E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02153 8cb9d7b5f1592e9ac22fd095bc7234a9 460 SMART SM01086 352 446 5.1E-19 T 11-10-2018 IPR019489 Clp ATPase, C-terminal SYN_00371 a509735ecda9636b941be9562822a0a5 246 Gene3D G3DSA:3.30.420.40 5 245 1.3E-72 T 11-10-2018 SYN_00371 a509735ecda9636b941be9562822a0a5 246 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 3 243 1.6E-67 T 11-10-2018 IPR008275 CoA enzyme activase SYN_00371 a509735ecda9636b941be9562822a0a5 246 SUPERFAMILY SSF53067 3 245 2.59E-39 T 11-10-2018 SYN_00371 a509735ecda9636b941be9562822a0a5 246 Gene3D G3DSA:3.30.420.40 88 228 1.3E-72 T 11-10-2018 SYN_00371 a509735ecda9636b941be9562822a0a5 246 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 5 245 4.0E-45 T 11-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 SYN_01537 6c32f492259f018143c6f794872ab10d 690 SUPERFAMILY SSF109604 340 490 7.85E-17 T 11-10-2018 SYN_01537 6c32f492259f018143c6f794872ab10d 690 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 552 1.0E-210 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SYN_01537 6c32f492259f018143c6f794872ab10d 690 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 2 686 8.1E-232 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SYN_01537 6c32f492259f018143c6f794872ab10d 690 Pfam PF05746 DALR anticodon binding domain 583 678 1.5E-5 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SYN_01537 6c32f492259f018143c6f794872ab10d 690 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 316 332 1.6E-34 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SYN_01537 6c32f492259f018143c6f794872ab10d 690 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 244 259 1.6E-34 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SYN_01537 6c32f492259f018143c6f794872ab10d 690 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 1.6E-34 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SYN_01537 6c32f492259f018143c6f794872ab10d 690 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 1.6E-34 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SYN_01537 6c32f492259f018143c6f794872ab10d 690 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 1.6E-34 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SYN_01537 6c32f492259f018143c6f794872ab10d 690 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 686 26.194 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SYN_02164 3a1250164f4937b3d494883597592c79 93 SMART SM00746 52 89 2.2E-5 T 11-10-2018 IPR011017 TRASH domain SYN_00601 1569e020cc0cc32cc842549170f07efc 336 Gene3D G3DSA:3.90.650.10 156 336 1.8E-50 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily SYN_00601 1569e020cc0cc32cc842549170f07efc 336 SUPERFAMILY SSF56042 158 330 5.83E-41 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily SYN_00601 1569e020cc0cc32cc842549170f07efc 336 Pfam PF00586 AIR synthase related protein, N-terminal domain 39 150 1.2E-16 T 11-10-2018 IPR016188 PurM-like, N-terminal domain SYN_00601 1569e020cc0cc32cc842549170f07efc 336 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 5 336 2.8E-134 T 11-10-2018 IPR011854 Carbamoyl dehydratase HypE SYN_00601 1569e020cc0cc32cc842549170f07efc 336 PIRSF PIRSF005644 1 336 9.4E-122 T 11-10-2018 IPR011854 Carbamoyl dehydratase HypE SYN_00601 1569e020cc0cc32cc842549170f07efc 336 SUPERFAMILY SSF55326 6 151 2.79E-33 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily SYN_00601 1569e020cc0cc32cc842549170f07efc 336 Pfam PF02769 AIR synthase related protein, C-terminal domain 162 314 8.0E-24 T 11-10-2018 IPR010918 PurM-like, C-terminal domain SYN_00601 1569e020cc0cc32cc842549170f07efc 336 Gene3D G3DSA:3.30.1330.10 9 152 6.2E-50 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily SYN_01624 efd726d5004f22b741f40495c96f1372 470 Gene3D G3DSA:3.60.20.10 16 457 9.7E-153 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal SYN_01624 efd726d5004f22b741f40495c96f1372 470 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 16 457 2.7E-153 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 SYN_01624 efd726d5004f22b741f40495c96f1372 470 SUPERFAMILY SSF56235 16 256 3.6E-69 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal SYN_01624 efd726d5004f22b741f40495c96f1372 470 SUPERFAMILY SSF53271 249 463 1.31E-62 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like SYN_01624 efd726d5004f22b741f40495c96f1372 470 Gene3D G3DSA:3.40.50.2020 274 439 9.7E-153 T 11-10-2018 SYN_01624 efd726d5004f22b741f40495c96f1372 470 Pfam PF13537 Glutamine amidotransferase domain 95 212 2.0E-19 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain SYN_01624 efd726d5004f22b741f40495c96f1372 470 PIRSF PIRSF000485 12 469 1.8E-160 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 SYN_01624 efd726d5004f22b741f40495c96f1372 470 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 15 456 45.067 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 SYN_02150 ddcb945998e886183082bc8323cee66c 166 Pfam PF02577 Bifunctional nuclease 6 130 1.4E-45 T 11-10-2018 IPR003729 Bifunctional nuclease domain GO:0004518 SYN_02150 ddcb945998e886183082bc8323cee66c 166 SUPERFAMILY SSF103256 2 129 1.02E-42 T 11-10-2018 IPR036104 Bifunctional nuclease superfamily GO:0004518 SYN_02150 ddcb945998e886183082bc8323cee66c 166 Gene3D G3DSA:3.10.690.10 1 136 1.0E-49 T 11-10-2018 IPR036104 Bifunctional nuclease superfamily GO:0004518 SYN_00555 82df59607b749fb377fcd6d3f3279cb7 533 Pfam PF13145 PPIC-type PPIASE domain 245 382 2.8E-16 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 SYN_00555 82df59607b749fb377fcd6d3f3279cb7 533 SUPERFAMILY SSF54534 287 371 9.16E-5 T 11-10-2018 SYN_00555 82df59607b749fb377fcd6d3f3279cb7 533 Pfam PF13624 SurA N-terminal domain 1 161 3.7E-48 T 11-10-2018 SYN_00555 82df59607b749fb377fcd6d3f3279cb7 533 Gene3D G3DSA:1.10.4030.30 238 373 2.0E-6 T 11-10-2018 SYN_00555 82df59607b749fb377fcd6d3f3279cb7 533 Gene3D G3DSA:1.10.4030.30 40 186 2.6E-14 T 11-10-2018 SYN_00555 82df59607b749fb377fcd6d3f3279cb7 533 SUPERFAMILY SSF109998 39 232 3.22E-23 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily SYN_00555 82df59607b749fb377fcd6d3f3279cb7 533 Gene3D G3DSA:3.10.50.40 272 371 2.0E-6 T 11-10-2018 SYN_01782 71876f9eeb76c1cf24f9ff4b43adbfa1 88 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 2 88 23.199 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01782 71876f9eeb76c1cf24f9ff4b43adbfa1 88 SMART SM01387 7 87 8.5E-53 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_01782 71876f9eeb76c1cf24f9ff4b43adbfa1 88 Gene3D G3DSA:1.10.287.10 1 88 1.2E-35 T 11-10-2018 SYN_01782 71876f9eeb76c1cf24f9ff4b43adbfa1 88 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 87 8.0E-30 T 11-10-2018 SYN_01782 71876f9eeb76c1cf24f9ff4b43adbfa1 88 Pfam PF00312 Ribosomal protein S15 10 87 1.3E-38 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_01782 71876f9eeb76c1cf24f9ff4b43adbfa1 88 ProSitePatterns PS00362 Ribosomal protein S15 signature. 38 68 - T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_01782 71876f9eeb76c1cf24f9ff4b43adbfa1 88 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 88 1.5E-40 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01782 71876f9eeb76c1cf24f9ff4b43adbfa1 88 SUPERFAMILY SSF47060 3 88 7.36E-37 T 11-10-2018 IPR009068 S15/NS1, RNA-binding SYN_02522 7675e6bff8eab045380ed52e6745b3fe 256 Pfam PF03747 ADP-ribosylglycohydrolase 1 229 8.4E-35 T 11-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 SYN_02522 7675e6bff8eab045380ed52e6745b3fe 256 SUPERFAMILY SSF101478 1 252 1.31E-52 T 11-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily SYN_02522 7675e6bff8eab045380ed52e6745b3fe 256 Gene3D G3DSA:1.10.4080.10 1 250 1.2E-53 T 11-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily SYN_02538 fd1be88a4d0fab60297eb03c85ee04ce 241 TIGRFAM TIGR01351 adk: adenylate kinase 27 236 5.7E-72 T 11-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 SYN_02538 fd1be88a4d0fab60297eb03c85ee04ce 241 Pfam PF05191 Adenylate kinase, active site lid 152 189 1.5E-10 T 11-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 SYN_02538 fd1be88a4d0fab60297eb03c85ee04ce 241 Hamap MF_00235 Adenylate kinase [adk]. 26 239 46.416 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 SYN_02538 fd1be88a4d0fab60297eb03c85ee04ce 241 PRINTS PR00094 Adenylate kinase signature 187 202 1.2E-33 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 SYN_02538 fd1be88a4d0fab60297eb03c85ee04ce 241 PRINTS PR00094 Adenylate kinase signature 29 42 1.2E-33 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 SYN_02538 fd1be88a4d0fab60297eb03c85ee04ce 241 PRINTS PR00094 Adenylate kinase signature 106 122 1.2E-33 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 SYN_02538 fd1be88a4d0fab60297eb03c85ee04ce 241 PRINTS PR00094 Adenylate kinase signature 204 218 1.2E-33 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 SYN_02538 fd1be88a4d0fab60297eb03c85ee04ce 241 PRINTS PR00094 Adenylate kinase signature 57 71 1.2E-33 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 SYN_02538 fd1be88a4d0fab60297eb03c85ee04ce 241 ProSitePatterns PS00113 Adenylate kinase signature. 106 117 - T 11-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 SYN_02538 fd1be88a4d0fab60297eb03c85ee04ce 241 SUPERFAMILY SSF52540 25 240 8.71E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02538 fd1be88a4d0fab60297eb03c85ee04ce 241 Pfam PF00406 Adenylate kinase 30 217 3.3E-53 T 11-10-2018 SYN_02538 fd1be88a4d0fab60297eb03c85ee04ce 241 Gene3D G3DSA:3.40.50.300 10 240 8.2E-74 T 11-10-2018 SYN_02951 46b040da86e71d0b86d2ac75a570ccd8 337 Pfam PF02685 Glucokinase 11 330 4.7E-105 T 11-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 SYN_02951 46b040da86e71d0b86d2ac75a570ccd8 337 Hamap MF_00524 Glucokinase [glk]. 9 332 32.069 T 11-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 SYN_02951 46b040da86e71d0b86d2ac75a570ccd8 337 Gene3D G3DSA:3.30.420.40 10 325 3.8E-109 T 11-10-2018 SYN_02951 46b040da86e71d0b86d2ac75a570ccd8 337 Gene3D G3DSA:3.40.367.20 107 315 3.8E-109 T 11-10-2018 SYN_02951 46b040da86e71d0b86d2ac75a570ccd8 337 SUPERFAMILY SSF53067 8 332 4.41E-57 T 11-10-2018 SYN_02951 46b040da86e71d0b86d2ac75a570ccd8 337 TIGRFAM TIGR00749 glk: glucokinase 11 326 1.6E-83 T 11-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 SYN_02927 a86a5755160f9b57e4b92f176755935c 430 SUPERFAMILY SSF48403 118 425 2.84E-73 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily SYN_02927 a86a5755160f9b57e4b92f176755935c 430 Gene3D G3DSA:1.25.40.960 171 211 2.9E-10 T 11-10-2018 SYN_02927 a86a5755160f9b57e4b92f176755935c 430 Pfam PF13857 Ankyrin repeats (many copies) 248 299 4.6E-8 T 11-10-2018 SYN_02927 a86a5755160f9b57e4b92f176755935c 430 SMART SM00248 261 290 0.0014 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 SYN_02927 a86a5755160f9b57e4b92f176755935c 430 SMART SM00248 294 331 1.6 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 SYN_02927 a86a5755160f9b57e4b92f176755935c 430 SMART SM00248 335 364 1.2E-5 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 SYN_02927 a86a5755160f9b57e4b92f176755935c 430 SMART SM00248 135 164 1.0E-5 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 SYN_02927 a86a5755160f9b57e4b92f176755935c 430 SMART SM00248 368 397 3.2E-7 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 SYN_02927 a86a5755160f9b57e4b92f176755935c 430 SMART SM00248 231 257 1.8 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 SYN_02927 a86a5755160f9b57e4b92f176755935c 430 SMART SM00248 77 131 12.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 SYN_02927 a86a5755160f9b57e4b92f176755935c 430 SMART SM00248 169 198 1.3E-4 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 SYN_02927 a86a5755160f9b57e4b92f176755935c 430 PRINTS PR01415 Ankyrin repeat signature 185 199 4.6E-8 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 SYN_02927 a86a5755160f9b57e4b92f176755935c 430 PRINTS PR01415 Ankyrin repeat signature 136 151 4.6E-8 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 SYN_02927 a86a5755160f9b57e4b92f176755935c 430 Gene3D G3DSA:1.25.40.20 212 429 3.7E-63 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily SYN_02927 a86a5755160f9b57e4b92f176755935c 430 Gene3D G3DSA:1.25.40.20 19 170 5.7E-23 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily SYN_02927 a86a5755160f9b57e4b92f176755935c 430 Pfam PF12796 Ankyrin repeats (3 copies) 316 399 2.7E-16 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain SYN_02927 a86a5755160f9b57e4b92f176755935c 430 Pfam PF12796 Ankyrin repeats (3 copies) 118 200 1.6E-16 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain SYN_02132 29fa35c379a8eca3da00b44ee034e152 88 TIGRFAM TIGR03959 hyd_TM1266: putative iron-only hydrogenase system regulator 9 84 1.2E-31 T 11-10-2018 IPR023860 [FeFe]-hydrogenase system regulator TM1266 SYN_02132 29fa35c379a8eca3da00b44ee034e152 88 SUPERFAMILY SSF55021 8 85 9.04E-24 T 11-10-2018 SYN_02132 29fa35c379a8eca3da00b44ee034e152 88 Gene3D G3DSA:3.30.70.1150 4 88 5.7E-32 T 11-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal SYN_00276 29bfc1b0482626521879efe738d9bc2e 116 ProDom PD007559 HYDRATASE NITRILE ALPHA SUBUNIT LYASE CHAIN METAL-BINDING DIRECT SEQUENCING NITRILASE 38 89 6.0E-6 T 11-10-2018 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 SYN_00276 29bfc1b0482626521879efe738d9bc2e 116 TIGRFAM TIGR03793 TOMM_pelo: NHLP leader peptide domain 34 96 1.1E-18 T 11-10-2018 IPR022513 Thiazole/oxazole-modified microcins SYN_00276 29bfc1b0482626521879efe738d9bc2e 116 SUPERFAMILY SSF56209 13 114 9.42E-23 T 11-10-2018 IPR036648 Nitrile hydratase alpha /Thiocyanate hydrolase gamma superfamily GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 SYN_00276 29bfc1b0482626521879efe738d9bc2e 116 Pfam PF02979 Nitrile hydratase, alpha chain 50 94 3.7E-7 T 11-10-2018 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 SYN_00276 29bfc1b0482626521879efe738d9bc2e 116 Gene3D G3DSA:3.90.330.10 9 91 1.7E-13 T 11-10-2018 IPR036648 Nitrile hydratase alpha /Thiocyanate hydrolase gamma superfamily GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 SYN_01983 9e2941f6453fc170d65e4732874579f0 637 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 598 0.0 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 SYN_01983 9e2941f6453fc170d65e4732874579f0 637 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 SYN_01983 9e2941f6453fc170d65e4732874579f0 637 Gene3D G3DSA:1.20.1270.10 519 602 8.7E-25 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 SYN_01983 9e2941f6453fc170d65e4732874579f0 637 Gene3D G3DSA:3.30.420.40 5 372 2.0E-165 T 11-10-2018 SYN_01983 9e2941f6453fc170d65e4732874579f0 637 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 SYN_01983 9e2941f6453fc170d65e4732874579f0 637 Pfam PF00012 Hsp70 protein 4 598 1.2E-272 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 SYN_01983 9e2941f6453fc170d65e4732874579f0 637 SUPERFAMILY SSF100934 502 600 6.15E-19 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 SYN_01983 9e2941f6453fc170d65e4732874579f0 637 Gene3D G3DSA:3.90.640.10 223 310 2.0E-165 T 11-10-2018 SYN_01983 9e2941f6453fc170d65e4732874579f0 637 Gene3D G3DSA:3.30.420.40 184 357 2.0E-165 T 11-10-2018 SYN_01983 9e2941f6453fc170d65e4732874579f0 637 SUPERFAMILY SSF53067 185 377 9.07E-68 T 11-10-2018 SYN_01983 9e2941f6453fc170d65e4732874579f0 637 SUPERFAMILY SSF100920 379 535 1.1E-61 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 SYN_01983 9e2941f6453fc170d65e4732874579f0 637 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.2E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 SYN_01983 9e2941f6453fc170d65e4732874579f0 637 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.2E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 SYN_01983 9e2941f6453fc170d65e4732874579f0 637 PRINTS PR00301 70kDa heat shock protein signature 329 345 2.2E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 SYN_01983 9e2941f6453fc170d65e4732874579f0 637 PRINTS PR00301 70kDa heat shock protein signature 54 62 2.2E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 SYN_01983 9e2941f6453fc170d65e4732874579f0 637 PRINTS PR00301 70kDa heat shock protein signature 197 207 2.2E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 SYN_01983 9e2941f6453fc170d65e4732874579f0 637 PRINTS PR00301 70kDa heat shock protein signature 464 480 2.2E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 SYN_01983 9e2941f6453fc170d65e4732874579f0 637 PRINTS PR00301 70kDa heat shock protein signature 138 158 2.2E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 SYN_01983 9e2941f6453fc170d65e4732874579f0 637 PRINTS PR00301 70kDa heat shock protein signature 383 402 2.2E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 SYN_01983 9e2941f6453fc170d65e4732874579f0 637 PRINTS PR00301 70kDa heat shock protein signature 360 380 2.2E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 SYN_01983 9e2941f6453fc170d65e4732874579f0 637 SUPERFAMILY SSF53067 4 184 3.5E-68 T 11-10-2018 SYN_01983 9e2941f6453fc170d65e4732874579f0 637 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 SYN_01983 9e2941f6453fc170d65e4732874579f0 637 Gene3D G3DSA:3.30.30.30 67 118 2.0E-165 T 11-10-2018 SYN_01983 9e2941f6453fc170d65e4732874579f0 637 Gene3D G3DSA:2.60.34.10 379 518 5.5E-64 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 SYN_01983 9e2941f6453fc170d65e4732874579f0 637 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 636 38.357 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 SYN_00026 bd4fb7a69a7f0b60ce8a3f9ae00b8160 373 Pfam PF01556 DnaJ C terminal domain 118 329 1.9E-39 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal SYN_00026 bd4fb7a69a7f0b60ce8a3f9ae00b8160 373 Gene3D G3DSA:2.60.260.20 251 352 8.6E-29 T 11-10-2018 SYN_00026 bd4fb7a69a7f0b60ce8a3f9ae00b8160 373 SMART SM00271 2 60 1.8E-31 T 11-10-2018 IPR001623 DnaJ domain SYN_00026 bd4fb7a69a7f0b60ce8a3f9ae00b8160 373 PRINTS PR00625 DnaJ domain signature 23 38 6.9E-30 T 11-10-2018 IPR001623 DnaJ domain SYN_00026 bd4fb7a69a7f0b60ce8a3f9ae00b8160 373 PRINTS PR00625 DnaJ domain signature 5 23 6.9E-30 T 11-10-2018 IPR001623 DnaJ domain SYN_00026 bd4fb7a69a7f0b60ce8a3f9ae00b8160 373 PRINTS PR00625 DnaJ domain signature 60 79 6.9E-30 T 11-10-2018 IPR001623 DnaJ domain SYN_00026 bd4fb7a69a7f0b60ce8a3f9ae00b8160 373 PRINTS PR00625 DnaJ domain signature 40 60 6.9E-30 T 11-10-2018 IPR001623 DnaJ domain SYN_00026 bd4fb7a69a7f0b60ce8a3f9ae00b8160 373 SUPERFAMILY SSF46565 2 102 3.4E-33 T 11-10-2018 IPR036869 Chaperone J-domain superfamily SYN_00026 bd4fb7a69a7f0b60ce8a3f9ae00b8160 373 Pfam PF00226 DnaJ domain 3 65 1.2E-27 T 11-10-2018 IPR001623 DnaJ domain SYN_00026 bd4fb7a69a7f0b60ce8a3f9ae00b8160 373 SUPERFAMILY SSF57938 130 205 1.29E-18 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily SYN_00026 bd4fb7a69a7f0b60ce8a3f9ae00b8160 373 SUPERFAMILY SSF49493 255 340 3.79E-22 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SYN_00026 bd4fb7a69a7f0b60ce8a3f9ae00b8160 373 ProSitePatterns PS00636 Nt-dnaJ domain signature. 45 64 - T 11-10-2018 IPR018253 DnaJ domain, conserved site SYN_00026 bd4fb7a69a7f0b60ce8a3f9ae00b8160 373 Gene3D G3DSA:1.10.287.110 1 108 3.7E-33 T 11-10-2018 IPR036869 Chaperone J-domain superfamily SYN_00026 bd4fb7a69a7f0b60ce8a3f9ae00b8160 373 SUPERFAMILY SSF49493 112 263 6.67E-17 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SYN_00026 bd4fb7a69a7f0b60ce8a3f9ae00b8160 373 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 1 365 36.862 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 SYN_00026 bd4fb7a69a7f0b60ce8a3f9ae00b8160 373 Pfam PF00684 DnaJ central domain 143 203 5.2E-11 T 11-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SYN_00026 bd4fb7a69a7f0b60ce8a3f9ae00b8160 373 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 3 344 1.3E-120 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 SYN_00026 bd4fb7a69a7f0b60ce8a3f9ae00b8160 373 Gene3D G3DSA:2.10.230.10 135 205 1.1E-18 T 11-10-2018 SYN_01787 d04a48e42efd2f0e6de1858c8e52a1ea 924 Gene3D G3DSA:2.40.30.10 597 714 3.7E-40 T 11-10-2018 SYN_01787 d04a48e42efd2f0e6de1858c8e52a1ea 924 SUPERFAMILY SSF52540 416 597 3.28E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01787 d04a48e42efd2f0e6de1858c8e52a1ea 924 Gene3D G3DSA:3.40.50.300 422 596 1.2E-70 T 11-10-2018 SYN_01787 d04a48e42efd2f0e6de1858c8e52a1ea 924 ProSitePatterns PS01176 Initiation factor 2 signature. 875 897 - T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 SYN_01787 d04a48e42efd2f0e6de1858c8e52a1ea 924 Pfam PF00009 Elongation factor Tu GTP binding domain 430 585 2.3E-30 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SYN_01787 d04a48e42efd2f0e6de1858c8e52a1ea 924 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 429 584 1.3E-33 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 SYN_01787 d04a48e42efd2f0e6de1858c8e52a1ea 924 SUPERFAMILY SSF52156 703 831 8.5E-38 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily SYN_01787 d04a48e42efd2f0e6de1858c8e52a1ea 924 Gene3D G3DSA:2.40.30.10 826 923 3.6E-31 T 11-10-2018 SYN_01787 d04a48e42efd2f0e6de1858c8e52a1ea 924 SUPERFAMILY SSF50447 825 922 3.09E-30 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily SYN_01787 d04a48e42efd2f0e6de1858c8e52a1ea 924 SUPERFAMILY SSF50447 597 680 1.9E-23 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily SYN_01787 d04a48e42efd2f0e6de1858c8e52a1ea 924 Pfam PF11987 Translation-initiation factor 2 710 813 6.9E-38 T 11-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 SYN_01787 d04a48e42efd2f0e6de1858c8e52a1ea 924 Gene3D G3DSA:1.10.10.2480 6 70 2.9E-21 T 11-10-2018 SYN_01787 d04a48e42efd2f0e6de1858c8e52a1ea 924 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 343 923 8.8E-255 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 SYN_01787 d04a48e42efd2f0e6de1858c8e52a1ea 924 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 8 922 17.769 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 SYN_01787 d04a48e42efd2f0e6de1858c8e52a1ea 924 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 352 400 1.8E-15 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal SYN_01787 d04a48e42efd2f0e6de1858c8e52a1ea 924 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 6 56 3.0E-17 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal SYN_01787 d04a48e42efd2f0e6de1858c8e52a1ea 924 Gene3D G3DSA:3.40.50.10050 718 825 5.7E-40 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily SYN_01740 fd1103fe56d3a6144af20a2b31c89fc4 509 Pfam PF01225 Mur ligase family, catalytic domain 25 98 4.5E-10 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 SYN_01740 fd1103fe56d3a6144af20a2b31c89fc4 509 SUPERFAMILY SSF63418 12 98 5.1E-21 T 11-10-2018 IPR035911 MurE/MurF, N-terminal SYN_01740 fd1103fe56d3a6144af20a2b31c89fc4 509 Gene3D G3DSA:3.90.190.20 344 509 2.4E-61 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 SYN_01740 fd1103fe56d3a6144af20a2b31c89fc4 509 Pfam PF08245 Mur ligase middle domain 111 317 1.3E-50 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 SYN_01740 fd1103fe56d3a6144af20a2b31c89fc4 509 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 24 506 2.3E-150 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 SYN_01740 fd1103fe56d3a6144af20a2b31c89fc4 509 Gene3D G3DSA:3.40.1390.10 1 99 2.1E-24 T 11-10-2018 SYN_01740 fd1103fe56d3a6144af20a2b31c89fc4 509 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 506 34.805 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 SYN_01740 fd1103fe56d3a6144af20a2b31c89fc4 509 Pfam PF02875 Mur ligase family, glutamate ligase domain 338 423 7.0E-19 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 SYN_01740 fd1103fe56d3a6144af20a2b31c89fc4 509 SUPERFAMILY SSF53244 338 508 5.8E-46 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 SYN_01740 fd1103fe56d3a6144af20a2b31c89fc4 509 SUPERFAMILY SSF53623 101 333 4.32E-70 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 SYN_01740 fd1103fe56d3a6144af20a2b31c89fc4 509 Gene3D G3DSA:3.40.1190.10 101 342 1.1E-79 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 SYN_00131 1122e86858bf29f9588c278df89cedb5 380 Gene3D G3DSA:3.40.50.2000 199 364 5.5E-20 T 11-10-2018 SYN_00131 1122e86858bf29f9588c278df89cedb5 380 SUPERFAMILY SSF53756 54 374 8.9E-35 T 11-10-2018 SYN_00131 1122e86858bf29f9588c278df89cedb5 380 Pfam PF13692 Glycosyl transferases group 1 199 338 1.7E-12 T 11-10-2018 SYN_00131 1122e86858bf29f9588c278df89cedb5 380 Pfam PF13579 Glycosyl transferase 4-like domain 76 175 4.4E-7 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 SYN_00131 1122e86858bf29f9588c278df89cedb5 380 Gene3D G3DSA:3.40.50.2000 55 198 9.8E-8 T 11-10-2018 SYN_00844 08d3103abd3d0e45f48e2a644b90c270 305 Gene3D G3DSA:3.40.190.10 156 239 1.6E-6 T 11-10-2018 SYN_00844 08d3103abd3d0e45f48e2a644b90c270 305 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 6 51 4.0E-12 T 11-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 SYN_00844 08d3103abd3d0e45f48e2a644b90c270 305 SUPERFAMILY SSF53850 102 253 1.54E-12 T 11-10-2018 SYN_00844 08d3103abd3d0e45f48e2a644b90c270 305 Pfam PF12727 PBP superfamily domain 90 277 2.8E-59 T 11-10-2018 IPR024370 PBP domain SYN_00844 08d3103abd3d0e45f48e2a644b90c270 305 Pfam PF12728 Helix-turn-helix domain 5 53 3.2E-13 T 11-10-2018 SYN_00486 67b9fd342baafe4d8ea0c61fbcd80c3f 367 SUPERFAMILY SSF52540 23 312 4.61E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02491 d83adcb72bfc9a834139d08e1abce857 240 Gene3D G3DSA:1.20.120.710 16 108 3.2E-37 T 11-10-2018 SYN_02491 d83adcb72bfc9a834139d08e1abce857 240 SUPERFAMILY SSF56784 2 237 2.99E-38 T 11-10-2018 IPR036412 HAD-like superfamily SYN_02491 d83adcb72bfc9a834139d08e1abce857 240 Gene3D G3DSA:3.40.50.1000 6 229 3.2E-37 T 11-10-2018 IPR023214 HAD superfamily SYN_02491 d83adcb72bfc9a834139d08e1abce857 240 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 207 9.3E-26 T 11-10-2018 SYN_02491 d83adcb72bfc9a834139d08e1abce857 240 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 6.8E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 SYN_02491 d83adcb72bfc9a834139d08e1abce857 240 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 197 210 6.8E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 SYN_02491 d83adcb72bfc9a834139d08e1abce857 240 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 151 167 6.8E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 SYN_02491 d83adcb72bfc9a834139d08e1abce857 240 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 96 207 3.8E-11 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 SYN_00600 1daa2e4a799c840f7ce8def8cb00e48e 778 SUPERFAMILY SSF54975 15 104 2.62E-20 T 11-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SYN_00600 1daa2e4a799c840f7ce8def8cb00e48e 778 Pfam PF07503 HypF finger 122 155 3.8E-17 T 11-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 SYN_00600 1daa2e4a799c840f7ce8def8cb00e48e 778 Pfam PF07503 HypF finger 172 204 8.2E-17 T 11-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 SYN_00600 1daa2e4a799c840f7ce8def8cb00e48e 778 Gene3D G3DSA:3.30.420.350 499 753 1.5E-136 T 11-10-2018 SYN_00600 1daa2e4a799c840f7ce8def8cb00e48e 778 Pfam PF01300 Telomere recombination 225 399 5.6E-50 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 SYN_00600 1daa2e4a799c840f7ce8def8cb00e48e 778 Gene3D G3DSA:3.30.110.120 269 387 4.8E-148 T 11-10-2018 SYN_00600 1daa2e4a799c840f7ce8def8cb00e48e 778 PIRSF PIRSF006256 15 777 1.6E-292 T 11-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 SYN_00600 1daa2e4a799c840f7ce8def8cb00e48e 778 Pfam PF00708 Acylphosphatase 21 103 7.1E-16 T 11-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SYN_00600 1daa2e4a799c840f7ce8def8cb00e48e 778 SUPERFAMILY SSF55821 189 406 6.1E-48 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily SYN_00600 1daa2e4a799c840f7ce8def8cb00e48e 778 Gene3D G3DSA:3.90.870.50 24 378 4.8E-148 T 11-10-2018 SYN_00600 1daa2e4a799c840f7ce8def8cb00e48e 778 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 25 767 3.1E-246 T 11-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 SYN_00600 1daa2e4a799c840f7ce8def8cb00e48e 778 Gene3D G3DSA:3.30.420.360 399 765 1.5E-136 T 11-10-2018 SYN_03856 fa9c24b15f3e0ce73813cc2d638f8574 51 Pfam PF12161 HsdM N-terminal domain 11 50 7.1E-16 T 11-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain SYN_03856 fa9c24b15f3e0ce73813cc2d638f8574 51 Gene3D G3DSA:1.20.1260.30 1 51 3.7E-21 T 11-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily SYN_03856 fa9c24b15f3e0ce73813cc2d638f8574 51 SUPERFAMILY SSF53335 9 48 2.57E-8 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_02772 f514ead997f9f41979454626a2b174ad 688 PIRSF PIRSF001265 1 687 1.9E-245 T 11-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 SYN_02772 f514ead997f9f41979454626a2b174ad 688 Pfam PF03030 Inorganic H+ pyrophosphatase 13 674 4.8E-252 T 11-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 SYN_02772 f514ead997f9f41979454626a2b174ad 688 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 2 680 23.96 T 11-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 SYN_02772 f514ead997f9f41979454626a2b174ad 688 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 10 679 2.2E-237 T 11-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 SYN_00466 a2214a08f6b5df2a7ae905ec8ee7b2e6 675 Gene3D G3DSA:3.40.50.300 290 549 6.8E-64 T 11-10-2018 SYN_00466 a2214a08f6b5df2a7ae905ec8ee7b2e6 675 Gene3D G3DSA:1.10.287.380 559 651 2.2E-8 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 SYN_00466 a2214a08f6b5df2a7ae905ec8ee7b2e6 675 SUPERFAMILY SSF52540 308 529 1.86E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00466 a2214a08f6b5df2a7ae905ec8ee7b2e6 675 Pfam PF00005 ABC transporter 18 192 9.1E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_00466 a2214a08f6b5df2a7ae905ec8ee7b2e6 675 Pfam PF16326 ABC transporter C-terminal domain 583 645 2.0E-15 T 11-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 SYN_00466 a2214a08f6b5df2a7ae905ec8ee7b2e6 675 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_00466 a2214a08f6b5df2a7ae905ec8ee7b2e6 675 Gene3D G3DSA:3.40.50.300 2 286 3.8E-63 T 11-10-2018 SYN_00466 a2214a08f6b5df2a7ae905ec8ee7b2e6 675 Pfam PF00005 ABC transporter 343 473 6.3E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_00466 a2214a08f6b5df2a7ae905ec8ee7b2e6 675 SUPERFAMILY SSF52540 2 272 2.62E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00466 a2214a08f6b5df2a7ae905ec8ee7b2e6 675 ProSitePatterns PS00211 ABC transporters family signature. 445 459 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_00466 a2214a08f6b5df2a7ae905ec8ee7b2e6 675 SMART SM00382 351 525 2.0E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00466 a2214a08f6b5df2a7ae905ec8ee7b2e6 675 SMART SM00382 26 244 5.3E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00466 a2214a08f6b5df2a7ae905ec8ee7b2e6 675 Pfam PF12848 ABC transporter 231 316 4.5E-25 T 11-10-2018 IPR032781 ABC-transporter extension domain SYN_02702 527579faf0595919a04ffcf0285a09b6 196 Gene3D G3DSA:3.40.50.2020 1 185 1.5E-51 T 11-10-2018 SYN_02702 527579faf0595919a04ffcf0285a09b6 196 SUPERFAMILY SSF53271 25 187 1.05E-36 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like SYN_02702 527579faf0595919a04ffcf0285a09b6 196 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 196 27.0 T 11-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 SYN_02702 527579faf0595919a04ffcf0285a09b6 196 Pfam PF00156 Phosphoribosyl transferase domain 101 164 3.9E-6 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 SYN_02702 527579faf0595919a04ffcf0285a09b6 196 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 28 169 4.3E-41 T 11-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 SYN_00236 09249e90186e8c20c0f622debcf8ea37 111 Pfam PF07883 Cupin domain 42 107 2.7E-9 T 11-10-2018 IPR013096 Cupin 2, conserved barrel SYN_00236 09249e90186e8c20c0f622debcf8ea37 111 Gene3D G3DSA:2.60.120.10 4 110 7.4E-33 T 11-10-2018 IPR014710 RmlC-like jelly roll fold SYN_00236 09249e90186e8c20c0f622debcf8ea37 111 SUPERFAMILY SSF51182 10 109 9.52E-22 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily SYN_02065 2f39e4068d1755b898b141daed75893f 931 SUPERFAMILY SSF52540 17 245 7.71E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02065 2f39e4068d1755b898b141daed75893f 931 Pfam PF12698 ABC-2 family transporter protein 585 917 4.3E-37 T 11-10-2018 SYN_02065 2f39e4068d1755b898b141daed75893f 931 Pfam PF00005 ABC transporter 300 443 4.3E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_02065 2f39e4068d1755b898b141daed75893f 931 Gene3D G3DSA:3.40.50.300 4 256 3.8E-60 T 11-10-2018 SYN_02065 2f39e4068d1755b898b141daed75893f 931 SUPERFAMILY SSF52540 272 506 3.39E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02065 2f39e4068d1755b898b141daed75893f 931 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_02065 2f39e4068d1755b898b141daed75893f 931 SMART SM00382 43 247 3.6E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_02065 2f39e4068d1755b898b141daed75893f 931 SMART SM00382 308 499 1.1E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_02065 2f39e4068d1755b898b141daed75893f 931 Gene3D G3DSA:3.40.50.300 274 523 1.8E-61 T 11-10-2018 SYN_02065 2f39e4068d1755b898b141daed75893f 931 Pfam PF00005 ABC transporter 34 181 1.1E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_02602 85aa51a1d4a478b9d35d48854434b378 723 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 21 614 4.9E-207 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 SYN_02602 85aa51a1d4a478b9d35d48854434b378 723 Pfam PF00152 tRNA synthetases class II (D, K and N) 153 591 2.2E-100 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_02602 85aa51a1d4a478b9d35d48854434b378 723 Pfam PF02938 GAD domain 342 439 3.4E-18 T 11-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 SYN_02602 85aa51a1d4a478b9d35d48854434b378 723 PRINTS PR01042 Aspartyl-tRNA synthetase signature 225 237 1.6E-23 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_02602 85aa51a1d4a478b9d35d48854434b378 723 PRINTS PR01042 Aspartyl-tRNA synthetase signature 242 255 1.6E-23 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_02602 85aa51a1d4a478b9d35d48854434b378 723 PRINTS PR01042 Aspartyl-tRNA synthetase signature 508 524 1.6E-23 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_02602 85aa51a1d4a478b9d35d48854434b378 723 PRINTS PR01042 Aspartyl-tRNA synthetase signature 552 566 1.6E-23 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_02602 85aa51a1d4a478b9d35d48854434b378 723 Gene3D G3DSA:2.40.50.140 16 128 2.2E-30 T 11-10-2018 SYN_02602 85aa51a1d4a478b9d35d48854434b378 723 Pfam PF01336 OB-fold nucleic acid binding domain 38 124 1.3E-14 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SYN_02602 85aa51a1d4a478b9d35d48854434b378 723 SUPERFAMILY SSF55681 152 592 2.21E-95 T 11-10-2018 SYN_02602 85aa51a1d4a478b9d35d48854434b378 723 Gene3D G3DSA:3.30.1360.30 306 453 7.0E-173 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 SYN_02602 85aa51a1d4a478b9d35d48854434b378 723 SUPERFAMILY SSF50249 13 131 5.33E-29 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_02602 85aa51a1d4a478b9d35d48854434b378 723 Gene3D G3DSA:3.30.930.10 151 615 7.0E-173 T 11-10-2018 SYN_02602 85aa51a1d4a478b9d35d48854434b378 723 SUPERFAMILY SSF55261 323 453 6.05E-26 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 SYN_02602 85aa51a1d4a478b9d35d48854434b378 723 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 21 618 32.204 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 SYN_03115 97b232e9e5f9c7283a0f17e8126410c9 89 Pfam PF00578 AhpC/TSA family 8 66 2.4E-8 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 SYN_03115 97b232e9e5f9c7283a0f17e8126410c9 89 SUPERFAMILY SSF52833 5 81 3.07E-15 T 11-10-2018 IPR036249 Thioredoxin-like superfamily SYN_03115 97b232e9e5f9c7283a0f17e8126410c9 89 Gene3D G3DSA:3.40.30.10 2 87 3.7E-15 T 11-10-2018 SYN_01783 3f5e15707a95e5f2c2e4a382e4030bc5 312 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 1 308 18.128 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 SYN_01783 3f5e15707a95e5f2c2e4a382e4030bc5 312 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 1 207 5.1E-69 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 SYN_01783 3f5e15707a95e5f2c2e4a382e4030bc5 312 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 23 170 2.2E-54 T 11-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 SYN_01783 3f5e15707a95e5f2c2e4a382e4030bc5 312 SUPERFAMILY SSF55120 1 213 1.76E-75 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 SYN_01783 3f5e15707a95e5f2c2e4a382e4030bc5 312 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 171 225 6.8E-15 T 11-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 SYN_01783 3f5e15707a95e5f2c2e4a382e4030bc5 312 Gene3D G3DSA:3.30.2350.10 1 230 6.1E-85 T 11-10-2018 SYN_00257 921b748607e19ba79b15bd33e517be4d 939 SUPERFAMILY SSF54862 849 921 9.31E-18 T 11-10-2018 SYN_00257 921b748607e19ba79b15bd33e517be4d 939 Pfam PF13450 NAD(P)-binding Rossmann-like domain 516 559 5.4E-9 T 11-10-2018 SYN_00257 921b748607e19ba79b15bd33e517be4d 939 Gene3D G3DSA:3.50.50.60 222 279 2.5E-8 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_00257 921b748607e19ba79b15bd33e517be4d 939 SUPERFAMILY SSF51905 34 348 8.58E-12 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_00257 921b748607e19ba79b15bd33e517be4d 939 Gene3D G3DSA:3.50.50.60 510 725 2.0E-19 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_00257 921b748607e19ba79b15bd33e517be4d 939 Gene3D G3DSA:3.50.50.60 280 324 2.5E-8 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_00257 921b748607e19ba79b15bd33e517be4d 939 Gene3D G3DSA:3.30.70.3270 10 124 3.2E-8 T 11-10-2018 SYN_00257 921b748607e19ba79b15bd33e517be4d 939 SUPERFAMILY SSF54862 9 121 1.32E-14 T 11-10-2018 SYN_00257 921b748607e19ba79b15bd33e517be4d 939 Gene3D G3DSA:3.30.70.20 826 930 1.7E-12 T 11-10-2018 SYN_00257 921b748607e19ba79b15bd33e517be4d 939 SUPERFAMILY SSF51971 514 846 3.65E-24 T 11-10-2018 SYN_00257 921b748607e19ba79b15bd33e517be4d 939 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 27 38 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_00257 921b748607e19ba79b15bd33e517be4d 939 Pfam PF12838 4Fe-4S dicluster domain 863 911 3.0E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_00257 921b748607e19ba79b15bd33e517be4d 939 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 63 341 1.3E-12 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SYN_01966 1fd00f8b07de77d781e20396aa70d8bd 398 Pfam PF00155 Aminotransferase class I and II 46 384 9.9E-27 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SYN_01966 1fd00f8b07de77d781e20396aa70d8bd 398 Gene3D G3DSA:3.90.1150.10 25 385 3.3E-125 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SYN_01966 1fd00f8b07de77d781e20396aa70d8bd 398 SUPERFAMILY SSF53383 15 391 3.44E-88 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SYN_01966 1fd00f8b07de77d781e20396aa70d8bd 398 Gene3D G3DSA:3.40.640.10 76 299 3.3E-125 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SYN_01966 1fd00f8b07de77d781e20396aa70d8bd 398 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 17 389 1.2E-136 T 11-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 SYN_00798 3b23d66d47c131743df06a5fd2a431a2 342 Gene3D G3DSA:3.40.50.620 7 173 7.5E-57 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_00798 3b23d66d47c131743df06a5fd2a431a2 342 Gene3D G3DSA:2.30.30.280 179 239 8.9E-18 T 11-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 SYN_00798 3b23d66d47c131743df06a5fd2a431a2 342 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 4 336 33.006 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 SYN_00798 3b23d66d47c131743df06a5fd2a431a2 342 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 17 335 9.4E-85 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 SYN_00798 3b23d66d47c131743df06a5fd2a431a2 342 Gene3D G3DSA:2.40.30.10 240 342 1.0E-22 T 11-10-2018 SYN_00798 3b23d66d47c131743df06a5fd2a431a2 342 SUPERFAMILY SSF52402 1 208 6.98E-35 T 11-10-2018 SYN_00798 3b23d66d47c131743df06a5fd2a431a2 342 Pfam PF03054 tRNA methyl transferase 16 335 2.4E-92 T 11-10-2018 SYN_01366 87881af243df3a0b08ac419a20d1b183 266 SUPERFAMILY SSF56300 30 243 3.1E-18 T 11-10-2018 SYN_01366 87881af243df3a0b08ac419a20d1b183 266 Pfam PF00149 Calcineurin-like phosphoesterase 1 217 4.1E-7 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 SYN_01366 87881af243df3a0b08ac419a20d1b183 266 Gene3D G3DSA:3.60.21.10 1 251 2.2E-11 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like SYN_01984 c3331697d8f7c587a52a34e312a0ddb8 266 SUPERFAMILY SSF64167 1 252 6.41E-78 T 11-10-2018 SYN_01984 c3331697d8f7c587a52a34e312a0ddb8 266 Pfam PF01975 Survival protein SurE 4 185 4.1E-59 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 SYN_01984 c3331697d8f7c587a52a34e312a0ddb8 266 Gene3D G3DSA:3.40.1210.10 1 254 1.2E-83 T 11-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 SYN_01984 c3331697d8f7c587a52a34e312a0ddb8 266 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 255 35.182 T 11-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 SYN_01984 c3331697d8f7c587a52a34e312a0ddb8 266 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 238 2.7E-71 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 SYN_00088 f91c8873c75efa21b0dc0580646f80d4 360 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 12 353 3.7E-93 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 SYN_00088 f91c8873c75efa21b0dc0580646f80d4 360 SMART SM01329 11 353 1.1E-169 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 SYN_00088 f91c8873c75efa21b0dc0580646f80d4 360 SUPERFAMILY SSF53659 6 355 2.47E-115 T 11-10-2018 SYN_00088 f91c8873c75efa21b0dc0580646f80d4 360 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 SYN_00088 f91c8873c75efa21b0dc0580646f80d4 360 Gene3D G3DSA:3.40.718.10 2 360 1.5E-129 T 11-10-2018 SYN_01507 f15d4a793b4f8e4f74f796a6b3fb643a 422 Pfam PF13635 Domain of unknown function (DUF4143) 215 366 2.0E-19 T 11-10-2018 IPR025420 Domain of unknown function DUF4143 SYN_01507 f15d4a793b4f8e4f74f796a6b3fb643a 422 SUPERFAMILY SSF52540 9 137 5.6E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01507 f15d4a793b4f8e4f74f796a6b3fb643a 422 Pfam PF13173 AAA domain 21 137 7.7E-20 T 11-10-2018 SYN_00572 548dcbde157601b0cdefd2371f4c548a 219 Pfam PF02545 Maf-like protein 19 201 1.6E-57 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 SYN_00572 548dcbde157601b0cdefd2371f4c548a 219 Gene3D G3DSA:3.90.950.10 18 208 3.4E-71 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like SYN_00572 548dcbde157601b0cdefd2371f4c548a 219 SUPERFAMILY SSF52972 18 201 2.35E-63 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like SYN_00572 548dcbde157601b0cdefd2371f4c548a 219 TIGRFAM TIGR00172 maf: septum formation protein Maf 17 200 1.1E-60 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 SYN_00572 548dcbde157601b0cdefd2371f4c548a 219 PIRSF PIRSF006305 13 207 2.0E-58 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 SYN_00572 548dcbde157601b0cdefd2371f4c548a 219 Hamap MF_00528 Septum formation protein Maf [maf]. 19 206 33.831 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 SYN_01766 64bfd53cd8887d042c9f58a3f0eb43c9 219 Pfam PF03641 Possible lysine decarboxylase 83 213 4.0E-36 T 11-10-2018 IPR031100 LOG family SYN_01766 64bfd53cd8887d042c9f58a3f0eb43c9 219 Gene3D G3DSA:3.40.50.450 18 216 6.3E-72 T 11-10-2018 SYN_01766 64bfd53cd8887d042c9f58a3f0eb43c9 219 SUPERFAMILY SSF102405 13 214 2.14E-63 T 11-10-2018 SYN_01766 64bfd53cd8887d042c9f58a3f0eb43c9 219 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 41 215 1.1E-42 T 11-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG SYN_03096 562bcfab02fdadb9a1cd1821e9f7dd6a 103 SUPERFAMILY SSF52833 2 101 1.7E-24 T 11-10-2018 IPR036249 Thioredoxin-like superfamily SYN_03096 562bcfab02fdadb9a1cd1821e9f7dd6a 103 Pfam PF00578 AhpC/TSA family 3 81 2.3E-16 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 SYN_03096 562bcfab02fdadb9a1cd1821e9f7dd6a 103 Gene3D G3DSA:3.40.30.10 1 102 2.3E-27 T 11-10-2018 SYN_02846 537254638f859b584c75134227213616 231 Pfam PF03609 PTS system sorbose-specific iic component 3 222 8.6E-25 T 11-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 SYN_03842 3e52600b1b53f215e1ba3ac8c67df27b 211 PIRSF PIRSF006578 2 211 3.8E-89 T 11-10-2018 IPR026328 Formylmethanofuran dehydrogenase, subunit E SYN_03842 3e52600b1b53f215e1ba3ac8c67df27b 211 Gene3D G3DSA:3.30.1330.130 13 156 4.0E-42 T 11-10-2018 SYN_03842 3e52600b1b53f215e1ba3ac8c67df27b 211 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 179 211 3.6E-7 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 SYN_03842 3e52600b1b53f215e1ba3ac8c67df27b 211 Pfam PF02663 FmdE, Molybdenum formylmethanofuran dehydrogenase operon 25 160 3.5E-40 T 11-10-2018 IPR003814 Formylmethanofuran dehydrogenase, subunit E domain SYN_03842 3e52600b1b53f215e1ba3ac8c67df27b 211 SUPERFAMILY SSF143555 15 174 2.22E-50 T 11-10-2018 SYN_02487 d0d19bc8ed16fa28c35bfaa611a72753 322 Pfam PF09312 SurA N-terminal domain 26 145 1.8E-18 T 11-10-2018 IPR015391 SurA N-terminal SYN_02487 d0d19bc8ed16fa28c35bfaa611a72753 322 Gene3D G3DSA:3.10.50.40 176 278 4.7E-74 T 11-10-2018 SYN_02487 d0d19bc8ed16fa28c35bfaa611a72753 322 Pfam PF00639 PPIC-type PPIASE domain 182 276 9.1E-23 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 SYN_02487 d0d19bc8ed16fa28c35bfaa611a72753 322 Gene3D G3DSA:1.10.4030.30 27 286 4.7E-74 T 11-10-2018 SYN_02487 d0d19bc8ed16fa28c35bfaa611a72753 322 SUPERFAMILY SSF54534 177 280 5.49E-26 T 11-10-2018 SYN_02487 d0d19bc8ed16fa28c35bfaa611a72753 322 SUPERFAMILY SSF109998 26 203 2.35E-33 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily SYN_02561 68069c9ad6b766d669f0569c85922e68 223 SUPERFAMILY SSF103088 97 214 1.96E-42 T 11-10-2018 IPR036737 OmpA-like domain superfamily SYN_02561 68069c9ad6b766d669f0569c85922e68 223 Pfam PF13488 Glycine zipper 34 82 4.4E-10 T 11-10-2018 IPR039567 Glycine zipper domain SYN_02561 68069c9ad6b766d669f0569c85922e68 223 PRINTS PR01021 OMPA domain signature 159 175 2.5E-13 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SYN_02561 68069c9ad6b766d669f0569c85922e68 223 PRINTS PR01021 OMPA domain signature 144 159 2.5E-13 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SYN_02561 68069c9ad6b766d669f0569c85922e68 223 PRINTS PR01021 OMPA domain signature 114 136 2.5E-13 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SYN_02561 68069c9ad6b766d669f0569c85922e68 223 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 197 217 2.9E-8 T 11-10-2018 SYN_02561 68069c9ad6b766d669f0569c85922e68 223 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 177 196 2.9E-8 T 11-10-2018 SYN_02561 68069c9ad6b766d669f0569c85922e68 223 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 159 176 2.9E-8 T 11-10-2018 SYN_02561 68069c9ad6b766d669f0569c85922e68 223 Gene3D G3DSA:3.30.1330.60 72 222 2.0E-48 T 11-10-2018 IPR036737 OmpA-like domain superfamily SYN_02561 68069c9ad6b766d669f0569c85922e68 223 Pfam PF00691 OmpA family 113 208 1.5E-26 T 11-10-2018 IPR006665 OmpA-like domain SYN_00395 de4c0332724881685693e0b639f633b5 143 Gene3D G3DSA:3.90.79.10 2 132 7.0E-23 T 11-10-2018 SYN_00395 de4c0332724881685693e0b639f633b5 143 PRINTS PR00502 NUDIX hydrolase family signature 54 69 1.8E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 SYN_00395 de4c0332724881685693e0b639f633b5 143 PRINTS PR00502 NUDIX hydrolase family signature 40 54 1.8E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 SYN_00395 de4c0332724881685693e0b639f633b5 143 SUPERFAMILY SSF55811 7 139 1.62E-24 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 SYN_00395 de4c0332724881685693e0b639f633b5 143 Pfam PF00293 NUDIX domain 14 120 5.0E-16 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 SYN_01948 d1b241da2c8d29f697ef9cd4333f4d0d 326 Pfam PF01687 Riboflavin kinase 185 306 5.0E-37 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 SYN_01948 d1b241da2c8d29f697ef9cd4333f4d0d 326 SMART SM00904 184 307 2.6E-56 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 SYN_01948 d1b241da2c8d29f697ef9cd4333f4d0d 326 Pfam PF06574 FAD synthetase 14 168 9.3E-51 T 11-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 SYN_01948 d1b241da2c8d29f697ef9cd4333f4d0d 326 Gene3D G3DSA:3.40.50.620 1 186 5.3E-60 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_01948 d1b241da2c8d29f697ef9cd4333f4d0d 326 SUPERFAMILY SSF52374 16 177 3.1E-35 T 11-10-2018 SYN_01948 d1b241da2c8d29f697ef9cd4333f4d0d 326 SUPERFAMILY SSF82114 175 307 1.31E-45 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 SYN_01948 d1b241da2c8d29f697ef9cd4333f4d0d 326 PIRSF PIRSF004491 1 309 9.5E-105 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 SYN_01948 d1b241da2c8d29f697ef9cd4333f4d0d 326 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 20 306 9.2E-80 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 SYN_01948 d1b241da2c8d29f697ef9cd4333f4d0d 326 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 18 85 1.1E-7 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SYN_01948 d1b241da2c8d29f697ef9cd4333f4d0d 326 Gene3D G3DSA:2.40.30.30 187 319 1.6E-43 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 SYN_02540 c51b24886fff92ac15a2049c812fe1f5 315 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 120 303 1.5E-23 T 11-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal SYN_02540 c51b24886fff92ac15a2049c812fe1f5 315 Gene3D G3DSA:3.40.630.30 7 305 3.7E-61 T 11-10-2018 SYN_02540 c51b24886fff92ac15a2049c812fe1f5 315 SUPERFAMILY SSF55729 6 141 1.27E-15 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase SYN_02540 c51b24886fff92ac15a2049c812fe1f5 315 PIRSF PIRSF018688 1 311 4.2E-54 T 11-10-2018 IPR016732 Uncharacterised conserved protein UCP018688 SYN_02540 c51b24886fff92ac15a2049c812fe1f5 315 SUPERFAMILY SSF55729 143 307 3.39E-41 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase SYN_02540 c51b24886fff92ac15a2049c812fe1f5 315 Gene3D G3DSA:3.40.630.30 130 303 3.7E-61 T 11-10-2018 SYN_00758 72a6bb025f6fa00d8627e2c8b6f0bb9c 594 SMART SM00400 37 91 1.9E-31 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SYN_00758 72a6bb025f6fa00d8627e2c8b6f0bb9c 594 Pfam PF10410 DnaB-helicase binding domain of primase 370 422 9.5E-9 T 11-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 SYN_00758 72a6bb025f6fa00d8627e2c8b6f0bb9c 594 SMART SM00493 262 333 2.1E-8 T 11-10-2018 IPR006171 TOPRIM domain SYN_00758 72a6bb025f6fa00d8627e2c8b6f0bb9c 594 Hamap MF_00974 DNA primase [dnaG]. 5 582 27.213 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 SYN_00758 72a6bb025f6fa00d8627e2c8b6f0bb9c 594 Gene3D G3DSA:3.90.980.10 111 242 8.8E-42 T 11-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily SYN_00758 72a6bb025f6fa00d8627e2c8b6f0bb9c 594 TIGRFAM TIGR01391 dnaG: DNA primase 9 417 1.2E-130 T 11-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 SYN_00758 72a6bb025f6fa00d8627e2c8b6f0bb9c 594 Gene3D G3DSA:3.90.580.10 5 102 6.6E-38 T 11-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 SYN_00758 72a6bb025f6fa00d8627e2c8b6f0bb9c 594 Pfam PF13155 Toprim-like 265 349 1.8E-16 T 11-10-2018 SYN_00758 72a6bb025f6fa00d8627e2c8b6f0bb9c 594 PIRSF PIRSF002811 3 592 3.9E-190 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 SYN_00758 72a6bb025f6fa00d8627e2c8b6f0bb9c 594 Pfam PF01807 CHC2 zinc finger 9 99 1.3E-36 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SYN_00758 72a6bb025f6fa00d8627e2c8b6f0bb9c 594 SUPERFAMILY SSF56731 117 422 2.7E-96 T 11-10-2018 SYN_00758 72a6bb025f6fa00d8627e2c8b6f0bb9c 594 Pfam PF08275 DNA primase catalytic core, N-terminal domain 127 254 6.3E-39 T 11-10-2018 IPR013264 DNA primase, catalytic core, N-terminal SYN_00758 72a6bb025f6fa00d8627e2c8b6f0bb9c 594 SUPERFAMILY SSF57783 7 100 2.21E-34 T 11-10-2018 SYN_00758 72a6bb025f6fa00d8627e2c8b6f0bb9c 594 Gene3D G3DSA:3.40.1360.10 244 366 1.3E-40 T 11-10-2018 SYN_01640 21b19c18d4de57f96e08da3c1970e87d 686 Gene3D G3DSA:1.10.599.10 500 651 7.0E-22 T 11-10-2018 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 SYN_01640 21b19c18d4de57f96e08da3c1970e87d 686 SMART SM00790 6 207 7.1E-92 T 11-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 SYN_01640 21b19c18d4de57f96e08da3c1970e87d 686 Gene3D G3DSA:1.10.569.10 252 446 5.1E-49 T 11-10-2018 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 SYN_01640 21b19c18d4de57f96e08da3c1970e87d 686 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 238 649 3.1E-57 T 11-10-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 SYN_01640 21b19c18d4de57f96e08da3c1970e87d 686 SUPERFAMILY SSF48310 217 662 1.44E-62 T 11-10-2018 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 SYN_01640 21b19c18d4de57f96e08da3c1970e87d 686 Gene3D G3DSA:3.60.9.10 1 211 1.3E-77 T 11-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily SYN_01640 21b19c18d4de57f96e08da3c1970e87d 686 SUPERFAMILY SSF56228 3 209 1.57E-63 T 11-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily SYN_01640 21b19c18d4de57f96e08da3c1970e87d 686 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 9 206 7.2E-66 T 11-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 SYN_00729 1ce86d6b0e56df6385c69a5b6e6e7071 570 SUPERFAMILY SSF51905 11 471 4.87E-68 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_00729 1ce86d6b0e56df6385c69a5b6e6e7071 570 Gene3D G3DSA:3.90.700.10 262 385 7.5E-136 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 SYN_00729 1ce86d6b0e56df6385c69a5b6e6e7071 570 Gene3D G3DSA:3.50.50.60 21 431 7.5E-136 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_00729 1ce86d6b0e56df6385c69a5b6e6e7071 570 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 382 404 3.1E-11 T 11-10-2018 SYN_00729 1ce86d6b0e56df6385c69a5b6e6e7071 570 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 22 41 3.1E-11 T 11-10-2018 SYN_00729 1ce86d6b0e56df6385c69a5b6e6e7071 570 PIRSF PIRSF000171 10 263 2.8E-28 T 11-10-2018 SYN_00729 1ce86d6b0e56df6385c69a5b6e6e7071 570 PIRSF PIRSF000171 347 567 1.3E-14 T 11-10-2018 SYN_00729 1ce86d6b0e56df6385c69a5b6e6e7071 570 Pfam PF00890 FAD binding domain 21 419 2.2E-83 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SYN_00729 1ce86d6b0e56df6385c69a5b6e6e7071 570 SUPERFAMILY SSF56425 252 380 7.33E-27 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 SYN_00729 1ce86d6b0e56df6385c69a5b6e6e7071 570 Gene3D G3DSA:1.20.58.100 453 565 6.2E-26 T 11-10-2018 SYN_00729 1ce86d6b0e56df6385c69a5b6e6e7071 570 Pfam PF02910 Fumarate reductase flavoprotein C-term 471 558 2.2E-13 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SYN_00729 1ce86d6b0e56df6385c69a5b6e6e7071 570 SUPERFAMILY SSF46977 456 552 3.14E-24 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SYN_00729 1ce86d6b0e56df6385c69a5b6e6e7071 570 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 20 546 8.8E-144 T 11-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 SYN_02767 21d427b34c4ec94b0c0140b1b87ab7a5 313 Gene3D G3DSA:3.40.50.2020 148 289 1.2E-127 T 11-10-2018 SYN_02767 21d427b34c4ec94b0c0140b1b87ab7a5 313 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 5 312 5.9E-127 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 SYN_02767 21d427b34c4ec94b0c0140b1b87ab7a5 313 Gene3D G3DSA:3.40.50.2020 8 301 1.2E-127 T 11-10-2018 SYN_02767 21d427b34c4ec94b0c0140b1b87ab7a5 313 SMART SM01400 5 121 2.2E-81 T 11-10-2018 SYN_02767 21d427b34c4ec94b0c0140b1b87ab7a5 313 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 5 313 49.586 T 11-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 SYN_02767 21d427b34c4ec94b0c0140b1b87ab7a5 313 SUPERFAMILY SSF53271 70 303 1.67E-65 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like SYN_02767 21d427b34c4ec94b0c0140b1b87ab7a5 313 Pfam PF14572 Phosphoribosyl synthetase-associated domain 200 312 7.1E-31 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 SYN_02767 21d427b34c4ec94b0c0140b1b87ab7a5 313 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 11-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 SYN_02767 21d427b34c4ec94b0c0140b1b87ab7a5 313 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 5 121 1.4E-50 T 11-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 SYN_01438 a7e8210c6ded01e086d481f6fc70192b 561 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 300 419 3.1E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_01438 a7e8210c6ded01e086d481f6fc70192b 561 SUPERFAMILY SSF55785 51 177 9.87E-19 T 11-10-2018 IPR035965 PAS domain superfamily SYN_01438 a7e8210c6ded01e086d481f6fc70192b 561 SMART SM00448 439 556 7.7E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_01438 a7e8210c6ded01e086d481f6fc70192b 561 SMART SM00091 64 131 2.5E-6 T 11-10-2018 IPR000014 PAS domain SYN_01438 a7e8210c6ded01e086d481f6fc70192b 561 Gene3D G3DSA:3.40.50.2300 434 559 5.0E-24 T 11-10-2018 SYN_01438 a7e8210c6ded01e086d481f6fc70192b 561 SUPERFAMILY SSF52172 440 558 4.84E-23 T 11-10-2018 IPR011006 CheY-like superfamily SYN_01438 a7e8210c6ded01e086d481f6fc70192b 561 SMART SM00387 299 421 1.2E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_01438 a7e8210c6ded01e086d481f6fc70192b 561 Pfam PF00989 PAS fold 65 176 2.7E-13 T 11-10-2018 IPR013767 PAS fold GO:0006355 SYN_01438 a7e8210c6ded01e086d481f6fc70192b 561 Gene3D G3DSA:3.30.565.10 263 427 1.7E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_01438 a7e8210c6ded01e086d481f6fc70192b 561 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 61 186 5.8E-18 T 11-10-2018 IPR000014 PAS domain SYN_01438 a7e8210c6ded01e086d481f6fc70192b 561 Pfam PF00072 Response regulator receiver domain 441 556 2.3E-16 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_01438 a7e8210c6ded01e086d481f6fc70192b 561 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 376 1.8E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01438 a7e8210c6ded01e086d481f6fc70192b 561 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 418 1.8E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01438 a7e8210c6ded01e086d481f6fc70192b 561 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 362 1.8E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01438 a7e8210c6ded01e086d481f6fc70192b 561 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 399 1.8E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01438 a7e8210c6ded01e086d481f6fc70192b 561 SUPERFAMILY SSF55874 275 423 4.45E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_01438 a7e8210c6ded01e086d481f6fc70192b 561 Gene3D G3DSA:1.10.287.130 186 257 2.4E-13 T 11-10-2018 SYN_01438 a7e8210c6ded01e086d481f6fc70192b 561 Gene3D G3DSA:3.30.450.20 52 185 5.7E-21 T 11-10-2018 SYN_02539 1a0e41d0ada8ea854631fd1840177892 163 SUPERFAMILY SSF55729 34 155 2.29E-26 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase SYN_02539 1a0e41d0ada8ea854631fd1840177892 163 Pfam PF13673 Acetyltransferase (GNAT) domain 64 152 3.7E-14 T 11-10-2018 IPR000182 GNAT domain SYN_02539 1a0e41d0ada8ea854631fd1840177892 163 Gene3D G3DSA:3.40.630.30 32 156 9.8E-28 T 11-10-2018 SYN_01057 8f57d8677ef24de48c6c4d5ba1e831d6 211 Gene3D G3DSA:3.40.50.150 2 210 9.5E-39 T 11-10-2018 SYN_01057 8f57d8677ef24de48c6c4d5ba1e831d6 211 Pfam PF08241 Methyltransferase domain 37 134 9.2E-16 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 SYN_01057 8f57d8677ef24de48c6c4d5ba1e831d6 211 SUPERFAMILY SSF53335 10 195 1.53E-26 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_02219 020e501fa52e433a49b16f2e1eb6f696 345 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 237 248 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_02219 020e501fa52e433a49b16f2e1eb6f696 345 SUPERFAMILY SSF46548 229 334 1.02E-11 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SYN_02219 020e501fa52e433a49b16f2e1eb6f696 345 Pfam PF17179 4Fe-4S dicluster domain 236 331 1.5E-30 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_02662 6cbed30262c062b984ca571925e3d4c0 432 Gene3D G3DSA:3.40.50.2000 1 179 1.9E-14 T 11-10-2018 SYN_02662 6cbed30262c062b984ca571925e3d4c0 432 SUPERFAMILY SSF53756 2 426 4.71E-46 T 11-10-2018 SYN_02662 6cbed30262c062b984ca571925e3d4c0 432 Pfam PF00534 Glycosyl transferases group 1 304 402 1.3E-8 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 SYN_01936 d0eba421768c3bbffc9a96d9fe76616a 446 Gene3D G3DSA:3.65.10.10 262 442 1.6E-130 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 SYN_01936 d0eba421768c3bbffc9a96d9fe76616a 446 ProSitePatterns PS00885 EPSP synthase signature 2. 361 379 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 SYN_01936 d0eba421768c3bbffc9a96d9fe76616a 446 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 34 446 31.031 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 SYN_01936 d0eba421768c3bbffc9a96d9fe76616a 446 Gene3D G3DSA:3.65.10.10 44 261 1.6E-130 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 SYN_01936 d0eba421768c3bbffc9a96d9fe76616a 446 PIRSF PIRSF000505 26 446 4.2E-130 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 SYN_01936 d0eba421768c3bbffc9a96d9fe76616a 446 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 39 445 7.5E-124 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 SYN_01936 d0eba421768c3bbffc9a96d9fe76616a 446 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 39 442 5.9E-111 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 SYN_01936 d0eba421768c3bbffc9a96d9fe76616a 446 SUPERFAMILY SSF55205 37 445 8.76E-111 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 SYN_01710 6df6078f54aef426a4c93dfc554ca96c 157 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 4 157 3.4E-36 T 11-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 SYN_01710 6df6078f54aef426a4c93dfc554ca96c 157 SUPERFAMILY SSF55021 84 157 1.68E-14 T 11-10-2018 SYN_01710 6df6078f54aef426a4c93dfc554ca96c 157 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 5 79 2.0E-13 T 11-10-2018 SYN_01710 6df6078f54aef426a4c93dfc554ca96c 157 Pfam PF10369 Small subunit of acetolactate synthase 87 157 1.7E-14 T 11-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 SYN_01710 6df6078f54aef426a4c93dfc554ca96c 157 Pfam PF13710 ACT domain 15 76 2.4E-11 T 11-10-2018 SYN_01710 6df6078f54aef426a4c93dfc554ca96c 157 Gene3D G3DSA:3.30.70.1150 86 157 1.1E-13 T 11-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal SYN_01710 6df6078f54aef426a4c93dfc554ca96c 157 SUPERFAMILY SSF55021 6 79 1.97E-17 T 11-10-2018 SYN_01710 6df6078f54aef426a4c93dfc554ca96c 157 Gene3D G3DSA:3.30.70.260 3 81 2.6E-26 T 11-10-2018 SYN_01939 2c71e088ba2516fb861a6d4e34b6fa1f 364 PIRSF PIRSF001455 8 364 4.4E-109 T 11-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 SYN_01939 2c71e088ba2516fb861a6d4e34b6fa1f 364 Gene3D G3DSA:1.20.1090.10 177 364 9.6E-59 T 11-10-2018 SYN_01939 2c71e088ba2516fb861a6d4e34b6fa1f 364 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 359 60.699 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 SYN_01939 2c71e088ba2516fb861a6d4e34b6fa1f 364 Pfam PF01761 3-dehydroquinate synthase 72 328 1.9E-96 T 11-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 SYN_01939 2c71e088ba2516fb861a6d4e34b6fa1f 364 SUPERFAMILY SSF56796 15 360 3.27E-101 T 11-10-2018 SYN_01939 2c71e088ba2516fb861a6d4e34b6fa1f 364 Gene3D G3DSA:3.40.50.1970 1 176 9.1E-64 T 11-10-2018 SYN_01939 2c71e088ba2516fb861a6d4e34b6fa1f 364 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 17 356 1.7E-112 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 SYN_02209 400f274c9c28760ac56196c1a3bb8c11 247 Pfam PF01863 Protein of unknown function DUF45 33 240 2.4E-54 T 11-10-2018 IPR002725 Protein of unknown function DUF45 SYN_02209 400f274c9c28760ac56196c1a3bb8c11 247 Gene3D G3DSA:3.30.2010.10 154 240 3.9E-16 T 11-10-2018 SYN_02040 cbd3ac29550fe81179d41bba1508ae67 253 SUPERFAMILY SSF48150 51 247 2.27E-11 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 SYN_02040 cbd3ac29550fe81179d41bba1508ae67 253 Gene3D G3DSA:1.10.340.30 55 166 2.8E-6 T 11-10-2018 SYN_02040 cbd3ac29550fe81179d41bba1508ae67 253 Gene3D G3DSA:1.10.1670.10 169 244 2.8E-6 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 SYN_00347 76d750a12a881d7885f9d4547dbac4b8 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 7.7E-21 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SYN_00347 76d750a12a881d7885f9d4547dbac4b8 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 7.7E-21 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SYN_00347 76d750a12a881d7885f9d4547dbac4b8 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 7.7E-21 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SYN_00347 76d750a12a881d7885f9d4547dbac4b8 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 7.7E-21 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SYN_00347 76d750a12a881d7885f9d4547dbac4b8 112 Pfam PF01022 Bacterial regulatory protein, arsR family 16 59 4.5E-15 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SYN_00347 76d750a12a881d7885f9d4547dbac4b8 112 SUPERFAMILY SSF46785 2 75 3.09E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_00347 76d750a12a881d7885f9d4547dbac4b8 112 SMART SM00418 6 82 1.4E-24 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SYN_00347 76d750a12a881d7885f9d4547dbac4b8 112 Gene3D G3DSA:1.10.10.10 1 90 5.6E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_02569 3f6027fb63c477b5d18f6db2a220f86d 239 SUPERFAMILY SSF52540 8 220 5.6E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02569 3f6027fb63c477b5d18f6db2a220f86d 239 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 5 217 21.571 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 SYN_02569 3f6027fb63c477b5d18f6db2a220f86d 239 Pfam PF13500 AAA domain 7 214 8.3E-37 T 11-10-2018 SYN_02569 3f6027fb63c477b5d18f6db2a220f86d 239 PIRSF PIRSF006755 4 231 6.9E-41 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 SYN_02569 3f6027fb63c477b5d18f6db2a220f86d 239 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 9 178 1.3E-35 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 SYN_02569 3f6027fb63c477b5d18f6db2a220f86d 239 Gene3D G3DSA:3.40.50.300 6 222 4.8E-49 T 11-10-2018 SYN_00140 89c0b96a884cfdab332a757a4ccd7814 587 Gene3D G3DSA:1.10.599.10 235 577 3.9E-92 T 11-10-2018 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 SYN_00140 89c0b96a884cfdab332a757a4ccd7814 587 Gene3D G3DSA:1.10.569.10 237 403 3.9E-92 T 11-10-2018 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 SYN_00140 89c0b96a884cfdab332a757a4ccd7814 587 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 6 198 1.5E-54 T 11-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 SYN_00140 89c0b96a884cfdab332a757a4ccd7814 587 SUPERFAMILY SSF56228 1 202 1.57E-46 T 11-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily SYN_00140 89c0b96a884cfdab332a757a4ccd7814 587 SMART SM00790 4 200 3.2E-55 T 11-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 SYN_00140 89c0b96a884cfdab332a757a4ccd7814 587 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 214 577 5.1E-94 T 11-10-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 SYN_00140 89c0b96a884cfdab332a757a4ccd7814 587 Gene3D G3DSA:3.60.9.10 1 204 3.9E-56 T 11-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily SYN_00140 89c0b96a884cfdab332a757a4ccd7814 587 SUPERFAMILY SSF48310 204 581 3.01E-95 T 11-10-2018 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 SYN_00987 244837b434235c474cbebe6b707cbe41 96 Gene3D G3DSA:3.30.70.330 1 96 2.2E-32 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily SYN_00987 244837b434235c474cbebe6b707cbe41 96 Pfam PF00276 Ribosomal protein L23 7 92 9.0E-29 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 SYN_00987 244837b434235c474cbebe6b707cbe41 96 SUPERFAMILY SSF54189 4 94 1.91E-27 T 11-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_00987 244837b434235c474cbebe6b707cbe41 96 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 5 95 21.57 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 SYN_01201 291d2cc578d9f309307e02abdc48b995 130 SUPERFAMILY SSF52499 9 111 4.06E-35 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 SYN_01201 291d2cc578d9f309307e02abdc48b995 130 Gene3D G3DSA:3.40.50.850 1 130 8.6E-37 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 SYN_01201 291d2cc578d9f309307e02abdc48b995 130 Pfam PF00857 Isochorismatase family 6 110 1.5E-32 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 SYN_01832 a1051abfb50553a85c0972a1e958467c 387 Gene3D G3DSA:3.60.15.10 9 294 1.6E-18 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_01832 a1051abfb50553a85c0972a1e958467c 387 SUPERFAMILY SSF56281 9 264 2.03E-7 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_00932 b7db1a15023d5cad50ef740bbd9ed4d1 297 SUPERFAMILY SSF55811 42 214 3.89E-10 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 SYN_03252 d3183a6c8dfd7e0cb1bde3215e1e4d44 324 Gene3D G3DSA:1.10.600.10 1 323 7.4E-97 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily SYN_03252 d3183a6c8dfd7e0cb1bde3215e1e4d44 324 SUPERFAMILY SSF48576 4 323 2.52E-85 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily SYN_03252 d3183a6c8dfd7e0cb1bde3215e1e4d44 324 Pfam PF00348 Polyprenyl synthetase 32 264 1.0E-69 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 SYN_02405 7b167d186d3d435befa2e90a62e3dc63 123 TIGRFAM TIGR04117 Syntroph_Cxxx: Cys-Xaa-Xaa-Xaa repeat radical SAM target protein 25 117 1.0E-41 T 11-10-2018 IPR026484 Cys-Xaa-Xaa-Xaa repeat radical SAM target protein SYN_02405 7b167d186d3d435befa2e90a62e3dc63 123 TIGRFAM TIGR04114 tSAM_targ_Cxxx: modification target Cys-rich repeat 80 97 0.004 T 11-10-2018 IPR026393 Modification target Cys-rich repeat SYN_02405 7b167d186d3d435befa2e90a62e3dc63 123 TIGRFAM TIGR04114 tSAM_targ_Cxxx: modification target Cys-rich repeat 103 120 3.8E-4 T 11-10-2018 IPR026393 Modification target Cys-rich repeat SYN_02405 7b167d186d3d435befa2e90a62e3dc63 123 TIGRFAM TIGR04114 tSAM_targ_Cxxx: modification target Cys-rich repeat 95 112 0.0025 T 11-10-2018 IPR026393 Modification target Cys-rich repeat SYN_01094 b529b167854c904c8fe1bb768bc8b676 614 Gene3D G3DSA:3.30.565.10 455 613 4.8E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_01094 b529b167854c904c8fe1bb768bc8b676 614 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 498 603 1.0E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_01094 b529b167854c904c8fe1bb768bc8b676 614 SUPERFAMILY SSF55874 445 602 9.82E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_01094 b529b167854c904c8fe1bb768bc8b676 614 SMART SM00388 384 455 1.2E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_01094 b529b167854c904c8fe1bb768bc8b676 614 SMART SM00387 497 604 1.9E-32 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_01094 b529b167854c904c8fe1bb768bc8b676 614 Pfam PF00512 His Kinase A (phospho-acceptor) domain 384 452 5.3E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_01094 b529b167854c904c8fe1bb768bc8b676 614 SUPERFAMILY SSF47384 376 452 1.18E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SYN_01094 b529b167854c904c8fe1bb768bc8b676 614 Gene3D G3DSA:1.10.287.130 370 454 2.3E-22 T 11-10-2018 SYN_01094 b529b167854c904c8fe1bb768bc8b676 614 PRINTS PR00344 Bacterial sensor protein C-terminal signature 535 549 2.5E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01094 b529b167854c904c8fe1bb768bc8b676 614 PRINTS PR00344 Bacterial sensor protein C-terminal signature 564 582 2.5E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01094 b529b167854c904c8fe1bb768bc8b676 614 PRINTS PR00344 Bacterial sensor protein C-terminal signature 588 601 2.5E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01094 b529b167854c904c8fe1bb768bc8b676 614 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 563 2.5E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_02452 89f153f70900d269d2b6673929f340d3 73 Gene3D G3DSA:3.30.300.130 1 73 7.9E-32 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily SYN_02452 89f153f70900d269d2b6673929f340d3 73 SUPERFAMILY SSF117916 3 73 1.44E-26 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily SYN_02452 89f153f70900d269d2b6673929f340d3 73 Pfam PF01106 NifU-like domain 5 71 8.5E-30 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 SYN_02452 89f153f70900d269d2b6673929f340d3 73 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 9 73 4.0E-22 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 SYN_01693 212745f4e49fdac42f96db3bb36ea61f 82 Gene3D G3DSA:1.10.1200.10 2 80 1.2E-17 T 11-10-2018 IPR036736 ACP-like superfamily SYN_01693 212745f4e49fdac42f96db3bb36ea61f 82 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 40 80 1.0E-4 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 SYN_01693 212745f4e49fdac42f96db3bb36ea61f 82 Pfam PF00550 Phosphopantetheine attachment site 31 75 4.4E-5 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain SYN_01693 212745f4e49fdac42f96db3bb36ea61f 82 SUPERFAMILY SSF47336 6 81 6.67E-11 T 11-10-2018 IPR036736 ACP-like superfamily SYN_02481 24c09ccf5cf0522b0bd3dca6259d93a5 230 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 10 217 3.2E-22 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 SYN_02481 24c09ccf5cf0522b0bd3dca6259d93a5 230 Gene3D G3DSA:3.20.20.70 4 222 8.2E-43 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_02481 24c09ccf5cf0522b0bd3dca6259d93a5 230 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 12 222 23.742 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 SYN_02481 24c09ccf5cf0522b0bd3dca6259d93a5 230 SUPERFAMILY SSF51366 7 219 3.92E-36 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 SYN_00921 d35ca433e0bb47dcdc4bfd04ebdf6c7f 885 Gene3D G3DSA:3.10.20.310 235 310 1.5E-13 T 11-10-2018 SYN_00921 d35ca433e0bb47dcdc4bfd04ebdf6c7f 885 Gene3D G3DSA:2.40.160.50 561 884 2.6E-87 T 11-10-2018 SYN_00921 d35ca433e0bb47dcdc4bfd04ebdf6c7f 885 PIRSF PIRSF006076 120 885 6.9E-246 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 SYN_00921 d35ca433e0bb47dcdc4bfd04ebdf6c7f 885 Pfam PF01103 Surface antigen 585 883 3.8E-63 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 SYN_00921 d35ca433e0bb47dcdc4bfd04ebdf6c7f 885 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 163 883 9.0E-199 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 SYN_00921 d35ca433e0bb47dcdc4bfd04ebdf6c7f 885 Pfam PF04052 TolB amino-terminal domain 30 130 1.4E-6 T 11-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 SYN_00921 d35ca433e0bb47dcdc4bfd04ebdf6c7f 885 SUPERFAMILY SSF52964 32 130 1.31E-5 T 11-10-2018 SYN_00921 d35ca433e0bb47dcdc4bfd04ebdf6c7f 885 Gene3D G3DSA:3.10.20.310 316 403 3.1E-21 T 11-10-2018 SYN_00921 d35ca433e0bb47dcdc4bfd04ebdf6c7f 885 Gene3D G3DSA:3.10.20.310 157 233 1.4E-15 T 11-10-2018 SYN_00921 d35ca433e0bb47dcdc4bfd04ebdf6c7f 885 Gene3D G3DSA:3.10.20.310 476 560 8.4E-25 T 11-10-2018 SYN_00921 d35ca433e0bb47dcdc4bfd04ebdf6c7f 885 Pfam PF07244 Surface antigen variable number repeat 236 310 3.6E-14 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 SYN_00921 d35ca433e0bb47dcdc4bfd04ebdf6c7f 885 Pfam PF07244 Surface antigen variable number repeat 316 400 3.4E-11 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 SYN_00921 d35ca433e0bb47dcdc4bfd04ebdf6c7f 885 Pfam PF07244 Surface antigen variable number repeat 404 482 7.1E-10 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 SYN_00921 d35ca433e0bb47dcdc4bfd04ebdf6c7f 885 Pfam PF07244 Surface antigen variable number repeat 163 232 2.5E-9 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 SYN_00921 d35ca433e0bb47dcdc4bfd04ebdf6c7f 885 Pfam PF07244 Surface antigen variable number repeat 485 558 4.7E-11 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 SYN_00921 d35ca433e0bb47dcdc4bfd04ebdf6c7f 885 Gene3D G3DSA:3.10.20.310 404 475 4.5E-15 T 11-10-2018 SYN_01471 ff37068e3c8926dc1d489e49fcd2a4d4 334 Pfam PF14842 FliG N-terminal domain 4 99 4.4E-24 T 11-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain SYN_01471 ff37068e3c8926dc1d489e49fcd2a4d4 334 Gene3D G3DSA:1.10.220.30 88 192 3.2E-28 T 11-10-2018 SYN_01471 ff37068e3c8926dc1d489e49fcd2a4d4 334 Gene3D G3DSA:1.10.220.30 195 333 1.1E-42 T 11-10-2018 SYN_01471 ff37068e3c8926dc1d489e49fcd2a4d4 334 Gene3D G3DSA:1.10.220.30 1 86 1.1E-19 T 11-10-2018 SYN_01471 ff37068e3c8926dc1d489e49fcd2a4d4 334 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 2 333 7.8E-93 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SYN_01471 ff37068e3c8926dc1d489e49fcd2a4d4 334 Pfam PF01706 FliG C-terminal domain 218 324 9.5E-36 T 11-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal SYN_01471 ff37068e3c8926dc1d489e49fcd2a4d4 334 SUPERFAMILY SSF48029 6 103 5.75E-16 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical SYN_01471 ff37068e3c8926dc1d489e49fcd2a4d4 334 SUPERFAMILY SSF48029 115 324 4.32E-62 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical SYN_01471 ff37068e3c8926dc1d489e49fcd2a4d4 334 PRINTS PR00954 Flagellar motor switch protein FliG signature 272 298 7.4E-64 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SYN_01471 ff37068e3c8926dc1d489e49fcd2a4d4 334 PRINTS PR00954 Flagellar motor switch protein FliG signature 226 246 7.4E-64 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SYN_01471 ff37068e3c8926dc1d489e49fcd2a4d4 334 PRINTS PR00954 Flagellar motor switch protein FliG signature 195 220 7.4E-64 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SYN_01471 ff37068e3c8926dc1d489e49fcd2a4d4 334 PRINTS PR00954 Flagellar motor switch protein FliG signature 248 268 7.4E-64 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SYN_01471 ff37068e3c8926dc1d489e49fcd2a4d4 334 PRINTS PR00954 Flagellar motor switch protein FliG signature 4 20 7.4E-64 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SYN_01471 ff37068e3c8926dc1d489e49fcd2a4d4 334 PRINTS PR00954 Flagellar motor switch protein FliG signature 33 59 7.4E-64 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SYN_01471 ff37068e3c8926dc1d489e49fcd2a4d4 334 PRINTS PR00954 Flagellar motor switch protein FliG signature 115 138 7.4E-64 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SYN_01471 ff37068e3c8926dc1d489e49fcd2a4d4 334 PIRSF PIRSF003161 1 334 5.7E-122 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 SYN_01471 ff37068e3c8926dc1d489e49fcd2a4d4 334 Pfam PF14841 FliG middle domain 116 185 1.4E-24 T 11-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain SYN_02301 28ca16bdbe4e55328d0f4480993d0f4f 149 Pfam PF05069 Phage virion morphogenesis family 9 146 1.3E-40 T 11-10-2018 IPR006522 Phage virion morphogensis protein SYN_02301 28ca16bdbe4e55328d0f4480993d0f4f 149 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 15 145 2.3E-21 T 11-10-2018 IPR006522 Phage virion morphogensis protein SYN_02013 8af3f6a4b709aeca0e3904e7770bbfa3 157 SUPERFAMILY SSF102405 7 111 6.23E-7 T 11-10-2018 SYN_02013 8af3f6a4b709aeca0e3904e7770bbfa3 157 Gene3D G3DSA:3.40.50.450 1 157 1.3E-67 T 11-10-2018 SYN_02013 8af3f6a4b709aeca0e3904e7770bbfa3 157 Pfam PF12694 Putative molybdenum carrier 10 155 5.4E-58 T 11-10-2018 IPR024755 Molybdenum cofactor carrier, putative SYN_01729 19671e61f2ba3f2aa15d438965c1d0a3 594 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 476 491 2.4E-28 T 11-10-2018 SYN_01729 19671e61f2ba3f2aa15d438965c1d0a3 594 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 474 2.4E-28 T 11-10-2018 SYN_01729 19671e61f2ba3f2aa15d438965c1d0a3 594 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 305 324 2.4E-28 T 11-10-2018 SYN_01729 19671e61f2ba3f2aa15d438965c1d0a3 594 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 512 524 2.4E-28 T 11-10-2018 SYN_01729 19671e61f2ba3f2aa15d438965c1d0a3 594 Gene3D G3DSA:1.10.274.10 32 158 8.2E-74 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 SYN_01729 19671e61f2ba3f2aa15d438965c1d0a3 594 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 196 207 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 SYN_01729 19671e61f2ba3f2aa15d438965c1d0a3 594 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 459 477 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 SYN_01729 19671e61f2ba3f2aa15d438965c1d0a3 594 PIRSF PIRSF000732 8 586 6.0E-226 T 11-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 SYN_01729 19671e61f2ba3f2aa15d438965c1d0a3 594 SUPERFAMILY SSF51621 263 554 1.68E-95 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 SYN_01729 19671e61f2ba3f2aa15d438965c1d0a3 594 SUPERFAMILY SSF52009 138 258 2.49E-33 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 SYN_01729 19671e61f2ba3f2aa15d438965c1d0a3 594 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 268 551 3.4E-100 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 SYN_01729 19671e61f2ba3f2aa15d438965c1d0a3 594 Pfam PF00391 PEP-utilising enzyme, mobile domain 164 237 3.8E-23 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SYN_01729 19671e61f2ba3f2aa15d438965c1d0a3 594 Gene3D G3DSA:3.50.30.10 15 245 8.2E-74 T 11-10-2018 SYN_01729 19671e61f2ba3f2aa15d438965c1d0a3 594 SUPERFAMILY SSF47831 48 155 8.11E-27 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 SYN_01729 19671e61f2ba3f2aa15d438965c1d0a3 594 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 13 578 1.0E-179 T 11-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 SYN_01729 19671e61f2ba3f2aa15d438965c1d0a3 594 Gene3D G3DSA:3.20.20.60 246 586 3.0E-112 T 11-10-2018 SYN_01729 19671e61f2ba3f2aa15d438965c1d0a3 594 Pfam PF05524 PEP-utilising enzyme, N-terminal 14 138 1.6E-26 T 11-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SYN_02511 80085f7e6a653de49713d4066b2c8701 496 Pfam PF04055 Radical SAM superfamily 270 335 1.9E-7 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_02511 80085f7e6a653de49713d4066b2c8701 496 SMART SM00729 88 389 9.2E-28 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SYN_02511 80085f7e6a653de49713d4066b2c8701 496 Gene3D G3DSA:3.80.30.20 219 394 2.8E-10 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe SYN_02511 80085f7e6a653de49713d4066b2c8701 496 SUPERFAMILY SSF102114 217 391 3.66E-28 T 11-10-2018 SYN_00794 6a197461b60d80ca5db38a876237db6c 243 SUPERFAMILY SSF56024 94 234 1.17E-30 T 11-10-2018 SYN_00794 6a197461b60d80ca5db38a876237db6c 243 Pfam PF13091 PLD-like domain 107 228 7.1E-26 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 SYN_00794 6a197461b60d80ca5db38a876237db6c 243 SMART SM00155 175 202 1.2E-4 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 SYN_00794 6a197461b60d80ca5db38a876237db6c 243 Gene3D G3DSA:3.30.870.10 83 236 1.0E-38 T 11-10-2018 SYN_02394 554f8a4d292a224c0706c220c6977daf 343 Pfam PF02673 Bacitracin resistance protein BacA 46 333 2.9E-72 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 SYN_02394 554f8a4d292a224c0706c220c6977daf 343 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 41 339 16.101 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 SYN_01189 ca0dd3eedbfbb40aa909a032cc632e94 139 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 14 99 2.4E-5 T 11-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis SYN_01189 ca0dd3eedbfbb40aa909a032cc632e94 139 SUPERFAMILY SSF53146 4 106 1.96E-15 T 11-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily SYN_01189 ca0dd3eedbfbb40aa909a032cc632e94 139 Gene3D G3DSA:3.30.420.130 1 106 2.0E-10 T 11-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily SYN_00580 ccf99e73ea1cbddae723a05584c68be3 167 SMART SM00738 1 102 3.1E-7 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 SYN_00580 ccf99e73ea1cbddae723a05584c68be3 167 Pfam PF00467 KOW motif 116 148 1.1E-5 T 11-10-2018 IPR005824 KOW SYN_00580 ccf99e73ea1cbddae723a05584c68be3 167 SMART SM00739 113 140 6.9E-4 T 11-10-2018 IPR005824 KOW SYN_00580 ccf99e73ea1cbddae723a05584c68be3 167 Gene3D G3DSA:3.30.70.940 1 167 5.9E-37 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 SYN_00580 ccf99e73ea1cbddae723a05584c68be3 167 Pfam PF02357 Transcription termination factor nusG 1 99 8.1E-20 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 SYN_00580 ccf99e73ea1cbddae723a05584c68be3 167 PRINTS PR00338 Transcription termination factor NUSG signature 46 58 5.4E-5 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 SYN_00580 ccf99e73ea1cbddae723a05584c68be3 167 PRINTS PR00338 Transcription termination factor NUSG signature 125 140 5.4E-5 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 SYN_00580 ccf99e73ea1cbddae723a05584c68be3 167 PRINTS PR00338 Transcription termination factor NUSG signature 143 159 5.4E-5 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 SYN_00580 ccf99e73ea1cbddae723a05584c68be3 167 SUPERFAMILY SSF50104 115 167 1.38E-11 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily SYN_00580 ccf99e73ea1cbddae723a05584c68be3 167 SUPERFAMILY SSF82679 1 104 2.09E-25 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 SYN_02012 74d8a64a257c78467b6b46d3d8d576ae 362 Pfam PF11799 impB/mucB/samB family C-terminal domain 251 354 5.2E-17 T 11-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 SYN_02012 74d8a64a257c78467b6b46d3d8d576ae 362 Gene3D G3DSA:3.30.1490.100 253 358 8.3E-24 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 SYN_02012 74d8a64a257c78467b6b46d3d8d576ae 362 SUPERFAMILY SSF56672 7 245 7.65E-86 T 11-10-2018 SYN_02012 74d8a64a257c78467b6b46d3d8d576ae 362 Gene3D G3DSA:2.30.40.20 24 85 2.8E-30 T 11-10-2018 SYN_02012 74d8a64a257c78467b6b46d3d8d576ae 362 Pfam PF00817 impB/mucB/samB family 19 165 1.1E-47 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 SYN_02012 74d8a64a257c78467b6b46d3d8d576ae 362 Gene3D G3DSA:1.10.150.20 180 247 3.0E-20 T 11-10-2018 SYN_02012 74d8a64a257c78467b6b46d3d8d576ae 362 SUPERFAMILY SSF100879 250 350 2.67E-24 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 SYN_02012 74d8a64a257c78467b6b46d3d8d576ae 362 Pfam PF11798 IMS family HHH motif 178 208 1.3E-9 T 11-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 SYN_02012 74d8a64a257c78467b6b46d3d8d576ae 362 Gene3D G3DSA:3.30.70.270 86 175 2.8E-28 T 11-10-2018 SYN_02012 74d8a64a257c78467b6b46d3d8d576ae 362 Hamap MF_01113 DNA polymerase IV [dinB]. 13 361 34.967 T 11-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 SYN_00293 101d76151946acb4dca4c1005b2ab506 68 Pfam PF04024 PspC domain 9 64 5.4E-18 T 11-10-2018 IPR007168 Phage shock protein, PspC, N-terminal SYN_02129 7f85ccf50989cd774af7b1d46b9d2c52 267 Gene3D G3DSA:3.40.50.150 31 241 1.8E-18 T 11-10-2018 SYN_02129 7f85ccf50989cd774af7b1d46b9d2c52 267 Pfam PF13649 Methyltransferase domain 58 146 2.3E-11 T 11-10-2018 SYN_02129 7f85ccf50989cd774af7b1d46b9d2c52 267 SUPERFAMILY SSF53335 47 194 5.08E-23 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_00143 9d1071bf3e4c26e32f1cd6a5b379b55c 307 Gene3D G3DSA:3.40.250.10 23 164 8.0E-35 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily SYN_00143 9d1071bf3e4c26e32f1cd6a5b379b55c 307 Pfam PF00581 Rhodanese-like domain 183 299 2.7E-13 T 11-10-2018 IPR001763 Rhodanese-like domain SYN_00143 9d1071bf3e4c26e32f1cd6a5b379b55c 307 Pfam PF00581 Rhodanese-like domain 31 143 7.9E-18 T 11-10-2018 IPR001763 Rhodanese-like domain SYN_00143 9d1071bf3e4c26e32f1cd6a5b379b55c 307 SMART SM00450 30 149 2.9E-14 T 11-10-2018 IPR001763 Rhodanese-like domain SYN_00143 9d1071bf3e4c26e32f1cd6a5b379b55c 307 SMART SM00450 171 303 3.1E-18 T 11-10-2018 IPR001763 Rhodanese-like domain SYN_00143 9d1071bf3e4c26e32f1cd6a5b379b55c 307 SUPERFAMILY SSF52821 175 304 5.24E-25 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily SYN_00143 9d1071bf3e4c26e32f1cd6a5b379b55c 307 SUPERFAMILY SSF52821 27 170 4.85E-29 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily SYN_00143 9d1071bf3e4c26e32f1cd6a5b379b55c 307 Gene3D G3DSA:3.40.250.10 170 307 2.0E-30 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily SYN_00323 dc34f13fd6dc6408cfe544c48154a133 377 PIRSF PIRSF006404 2 376 1.2E-92 T 11-10-2018 IPR016483 Uncharacterised conserved protein UCP006404, peptidase M50/CBS SYN_00323 dc34f13fd6dc6408cfe544c48154a133 377 Pfam PF00571 CBS domain 248 298 0.0011 T 11-10-2018 IPR000644 CBS domain SYN_00323 dc34f13fd6dc6408cfe544c48154a133 377 Pfam PF00571 CBS domain 311 367 3.3E-10 T 11-10-2018 IPR000644 CBS domain SYN_00323 dc34f13fd6dc6408cfe544c48154a133 377 SUPERFAMILY SSF54631 246 366 1.59E-20 T 11-10-2018 SYN_00323 dc34f13fd6dc6408cfe544c48154a133 377 Pfam PF02163 Peptidase family M50 140 182 1.8E-7 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 SYN_00323 dc34f13fd6dc6408cfe544c48154a133 377 Gene3D G3DSA:3.10.580.10 232 369 2.9E-19 T 11-10-2018 SYN_00323 dc34f13fd6dc6408cfe544c48154a133 377 SMART SM00116 255 303 1.5 T 11-10-2018 IPR000644 CBS domain SYN_00323 dc34f13fd6dc6408cfe544c48154a133 377 SMART SM00116 320 367 4.1E-9 T 11-10-2018 IPR000644 CBS domain SYN_00323 dc34f13fd6dc6408cfe544c48154a133 377 Pfam PF13398 Peptidase M50B-like 61 133 1.1E-5 T 11-10-2018 SYN_02781 3362f698bb51ad8c4e7fbc5b7ec75067 406 PIRSF PIRSF000726 56 406 4.7E-134 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 SYN_02781 3362f698bb51ad8c4e7fbc5b7ec75067 406 PIRSF PIRSF000726 1 64 8.6E-23 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 SYN_02781 3362f698bb51ad8c4e7fbc5b7ec75067 406 SUPERFAMILY SSF53633 4 243 1.7E-76 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily SYN_02781 3362f698bb51ad8c4e7fbc5b7ec75067 406 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 401 2.7E-136 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 SYN_02781 3362f698bb51ad8c4e7fbc5b7ec75067 406 Pfam PF00696 Amino acid kinase family 3 230 1.2E-50 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 SYN_02781 3362f698bb51ad8c4e7fbc5b7ec75067 406 Gene3D G3DSA:3.30.70.260 254 402 2.0E-58 T 11-10-2018 SYN_02781 3362f698bb51ad8c4e7fbc5b7ec75067 406 SUPERFAMILY SSF55021 247 326 4.82E-19 T 11-10-2018 SYN_02781 3362f698bb51ad8c4e7fbc5b7ec75067 406 Pfam PF01842 ACT domain 266 324 9.4E-12 T 11-10-2018 IPR002912 ACT domain SYN_02781 3362f698bb51ad8c4e7fbc5b7ec75067 406 SUPERFAMILY SSF55021 327 403 1.04E-24 T 11-10-2018 SYN_02781 3362f698bb51ad8c4e7fbc5b7ec75067 406 Pfam PF13840 ACT domain 335 398 1.2E-15 T 11-10-2018 IPR027795 CASTOR, ACT domain SYN_02781 3362f698bb51ad8c4e7fbc5b7ec75067 406 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 SYN_02781 3362f698bb51ad8c4e7fbc5b7ec75067 406 Gene3D G3DSA:3.30.70.260 260 337 2.0E-58 T 11-10-2018 SYN_02781 3362f698bb51ad8c4e7fbc5b7ec75067 406 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 64 401 2.6E-121 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 SYN_02781 3362f698bb51ad8c4e7fbc5b7ec75067 406 Gene3D G3DSA:3.40.1160.10 1 253 9.1E-89 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily SYN_02326 9d3c9fe5c35280625c48f5ae90ae0f08 239 SUPERFAMILY SSF52540 30 220 3.38E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02326 9d3c9fe5c35280625c48f5ae90ae0f08 239 Gene3D G3DSA:3.40.50.300 5 171 5.4E-11 T 11-10-2018 SYN_02326 9d3c9fe5c35280625c48f5ae90ae0f08 239 Pfam PF13401 AAA domain 29 142 2.1E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01855 30a255167c2d0751fbda608c4e3f9579 346 Gene3D G3DSA:1.10.10.10 31 100 3.6E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_01855 30a255167c2d0751fbda608c4e3f9579 346 Pfam PF08279 HTH domain 45 94 1.8E-6 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 SYN_01855 30a255167c2d0751fbda608c4e3f9579 346 Pfam PF13280 WYL domain 167 336 6.0E-29 T 11-10-2018 IPR026881 WYL domain SYN_01855 30a255167c2d0751fbda608c4e3f9579 346 SUPERFAMILY SSF46785 45 97 1.56E-5 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_01855 30a255167c2d0751fbda608c4e3f9579 346 PIRSF PIRSF016838 36 343 4.3E-15 T 11-10-2018 IPR028349 Protein PafC SYN_02450 11644618923bfd1f68b38b0c4a1892a0 173 Pfam PF00156 Phosphoribosyl transferase domain 14 159 1.2E-25 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 SYN_02450 11644618923bfd1f68b38b0c4a1892a0 173 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 8 172 3.7E-62 T 11-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 SYN_02450 11644618923bfd1f68b38b0c4a1892a0 173 Gene3D G3DSA:3.40.50.2020 1 173 1.0E-64 T 11-10-2018 SYN_02450 11644618923bfd1f68b38b0c4a1892a0 173 SUPERFAMILY SSF53271 8 172 4.2E-52 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like SYN_01103 c1b9abb1b49178070f7be287bee8fd92 333 SUPERFAMILY SSF53448 3 205 9.65E-53 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_01103 c1b9abb1b49178070f7be287bee8fd92 333 Pfam PF00535 Glycosyl transferase family 2 5 170 3.0E-31 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 SYN_01103 c1b9abb1b49178070f7be287bee8fd92 333 Gene3D G3DSA:3.90.550.10 1 212 7.8E-53 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_02455 428f1984dbf5a4c9b0431321cf8e65f3 277 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 9 240 1.7E-69 T 11-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 SYN_02455 428f1984dbf5a4c9b0431321cf8e65f3 277 PIRSF PIRSF005578 3 270 3.8E-100 T 11-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 SYN_02455 428f1984dbf5a4c9b0431321cf8e65f3 277 SUPERFAMILY SSF53335 57 245 8.14E-23 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_02455 428f1984dbf5a4c9b0431321cf8e65f3 277 Pfam PF01728 FtsJ-like methyltransferase 64 245 5.7E-22 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 SYN_02455 428f1984dbf5a4c9b0431321cf8e65f3 277 SMART SM00363 8 73 6.9E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_02455 428f1984dbf5a4c9b0431321cf8e65f3 277 Gene3D G3DSA:3.40.50.150 67 272 1.7E-76 T 11-10-2018 SYN_02455 428f1984dbf5a4c9b0431321cf8e65f3 277 SUPERFAMILY SSF55174 5 72 4.56E-11 T 11-10-2018 SYN_02455 428f1984dbf5a4c9b0431321cf8e65f3 277 Gene3D G3DSA:3.10.290.10 3 66 6.2E-20 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 SYN_02455 428f1984dbf5a4c9b0431321cf8e65f3 277 Pfam PF01479 S4 domain 9 49 5.3E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_02341 48211c5121feeddfe749ce93c2c601ab 441 Gene3D G3DSA:2.160.20.100 46 113 3.6E-20 T 11-10-2018 SYN_02341 48211c5121feeddfe749ce93c2c601ab 441 Pfam PF00805 Pentapeptide repeats (8 copies) 112 151 2.8E-13 T 11-10-2018 IPR001646 Pentapeptide repeat SYN_02341 48211c5121feeddfe749ce93c2c601ab 441 Pfam PF00805 Pentapeptide repeats (8 copies) 202 240 1.4E-8 T 11-10-2018 IPR001646 Pentapeptide repeat SYN_02341 48211c5121feeddfe749ce93c2c601ab 441 Pfam PF00805 Pentapeptide repeats (8 copies) 48 85 2.0E-9 T 11-10-2018 IPR001646 Pentapeptide repeat SYN_02341 48211c5121feeddfe749ce93c2c601ab 441 Pfam PF00805 Pentapeptide repeats (8 copies) 162 201 2.6E-9 T 11-10-2018 IPR001646 Pentapeptide repeat SYN_02341 48211c5121feeddfe749ce93c2c601ab 441 SUPERFAMILY SSF141571 47 194 1.18E-42 T 11-10-2018 SYN_02341 48211c5121feeddfe749ce93c2c601ab 441 Gene3D G3DSA:2.160.20.80 114 284 9.4E-44 T 11-10-2018 SYN_01107 ef76dc1e457dc460268564771931f540 361 SUPERFAMILY SSF53448 6 229 3.75E-58 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_01107 ef76dc1e457dc460268564771931f540 361 Gene3D G3DSA:3.90.550.10 5 208 1.6E-53 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_01107 ef76dc1e457dc460268564771931f540 361 Pfam PF00535 Glycosyl transferase family 2 9 128 2.3E-37 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 SYN_02369 61d99f3b4e7cb25a465ddd9b8a7f91dd 159 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 146 1.5E-58 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 SYN_02369 61d99f3b4e7cb25a465ddd9b8a7f91dd 159 Pfam PF03477 ATP cone domain 50 136 8.1E-19 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 SYN_02369 61d99f3b4e7cb25a465ddd9b8a7f91dd 159 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 154 82.905 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 SYN_02457 c4165aa118e85a516b05151e75e7466a 308 Pfam PF00348 Polyprenyl synthetase 42 274 1.1E-57 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 SYN_02457 c4165aa118e85a516b05151e75e7466a 308 Gene3D G3DSA:1.10.600.10 11 308 1.3E-99 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily SYN_02457 c4165aa118e85a516b05151e75e7466a 308 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 227 239 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site SYN_02457 c4165aa118e85a516b05151e75e7466a 308 SUPERFAMILY SSF48576 15 301 3.6E-84 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily SYN_02457 c4165aa118e85a516b05151e75e7466a 308 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 93 109 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site SYN_01605 e26954effa1151689fc68ef781c07d1a 255 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 82 103 5.4E-12 T 11-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 SYN_01605 e26954effa1151689fc68ef781c07d1a 255 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 196 209 5.4E-12 T 11-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 SYN_01605 e26954effa1151689fc68ef781c07d1a 255 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 49 67 5.4E-12 T 11-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 SYN_01605 e26954effa1151689fc68ef781c07d1a 255 SMART SM00849 17 223 0.0047 T 11-10-2018 IPR001279 Metallo-beta-lactamase SYN_01605 e26954effa1151689fc68ef781c07d1a 255 SUPERFAMILY SSF56281 1 254 5.9E-42 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_01605 e26954effa1151689fc68ef781c07d1a 255 Gene3D G3DSA:3.60.15.10 2 255 2.7E-35 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_01605 e26954effa1151689fc68ef781c07d1a 255 Pfam PF02112 cAMP phosphodiesterases class-II 45 215 1.4E-19 T 11-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 SYN_02247 0f1b46a9d0a28356b637060a9d05e574 463 Pfam PF03787 RAMP superfamily 103 280 1.8E-20 T 11-10-2018 IPR005537 CRISPR type III-associated RAMP protein SYN_02247 0f1b46a9d0a28356b637060a9d05e574 463 TIGRFAM TIGR01898 cas_TM1791_cmr6: CRISPR type III-B/RAMP module RAMP protein Cmr6 105 280 2.3E-48 T 11-10-2018 IPR010172 CRISPR-associated protein, TM1791 SYN_01124 af471045b82e5433d28fd62e36a287ec 549 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 47 249 3.9E-9 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 SYN_01124 af471045b82e5433d28fd62e36a287ec 549 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 395 516 3.8E-18 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 SYN_01124 af471045b82e5433d28fd62e36a287ec 549 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 274 348 1.2E-14 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 SYN_01124 af471045b82e5433d28fd62e36a287ec 549 SUPERFAMILY SSF52413 382 516 1.57E-16 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 SYN_01124 af471045b82e5433d28fd62e36a287ec 549 SMART SM00984 395 518 9.1E-29 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 SYN_01124 af471045b82e5433d28fd62e36a287ec 549 SUPERFAMILY SSF51735 47 256 9.31E-13 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_01124 af471045b82e5433d28fd62e36a287ec 549 SUPERFAMILY SSF48179 273 369 1.7E-18 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 SYN_01124 af471045b82e5433d28fd62e36a287ec 549 Gene3D G3DSA:3.40.50.720 274 542 3.5E-48 T 11-10-2018 SYN_01124 af471045b82e5433d28fd62e36a287ec 549 Gene3D G3DSA:3.40.50.720 28 266 1.5E-49 T 11-10-2018 SYN_00069 ba01e6a8c707b15db7ec1fc59134cdfe 144 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 8 144 30.978 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SYN_00069 ba01e6a8c707b15db7ec1fc59134cdfe 144 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 6 143 4.3E-63 T 11-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00069 ba01e6a8c707b15db7ec1fc59134cdfe 144 Pfam PF00298 Ribosomal protein L11, RNA binding domain 74 142 3.7E-24 T 11-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SYN_00069 ba01e6a8c707b15db7ec1fc59134cdfe 144 SUPERFAMILY SSF46906 70 142 1.26E-25 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily SYN_00069 ba01e6a8c707b15db7ec1fc59134cdfe 144 Gene3D G3DSA:1.10.10.2720 75 144 1.8E-26 T 11-10-2018 SYN_00069 ba01e6a8c707b15db7ec1fc59134cdfe 144 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 39 76 9.0E-14 T 11-10-2018 SYN_00069 ba01e6a8c707b15db7ec1fc59134cdfe 144 Gene3D G3DSA:3.30.1550.10 5 74 2.0E-33 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily SYN_00069 ba01e6a8c707b15db7ec1fc59134cdfe 144 SMART SM00649 12 143 9.3E-80 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SYN_00069 ba01e6a8c707b15db7ec1fc59134cdfe 144 SUPERFAMILY SSF54747 4 87 8.5E-30 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily SYN_00069 ba01e6a8c707b15db7ec1fc59134cdfe 144 Pfam PF03946 Ribosomal protein L11, N-terminal domain 12 69 2.3E-29 T 11-10-2018 IPR020784 Ribosomal protein L11, N-terminal SYN_00069 ba01e6a8c707b15db7ec1fc59134cdfe 144 ProSitePatterns PS00359 Ribosomal protein L11 signature. 129 144 - T 11-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00023 d1be83b3aa900c4e2f32cb0ffa974590 385 Pfam PF02687 FtsX-like permease family 288 373 1.4E-11 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 SYN_02666 a26ead38801e1775be9aeff3c9e5060f 654 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 586 2.5E-141 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 SYN_02666 a26ead38801e1775be9aeff3c9e5060f 654 PIRSF PIRSF001589 1 653 3.0E-159 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 SYN_02666 a26ead38801e1775be9aeff3c9e5060f 654 Pfam PF13537 Glutamine amidotransferase domain 52 175 1.9E-43 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain SYN_02666 a26ead38801e1775be9aeff3c9e5060f 654 SUPERFAMILY SSF52402 249 646 2.96E-91 T 11-10-2018 SYN_02666 a26ead38801e1775be9aeff3c9e5060f 654 Pfam PF00733 Asparagine synthase 259 651 4.9E-114 T 11-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 SYN_02666 a26ead38801e1775be9aeff3c9e5060f 654 SUPERFAMILY SSF56235 1 225 1.54E-64 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal SYN_02666 a26ead38801e1775be9aeff3c9e5060f 654 Gene3D G3DSA:3.60.20.10 4 189 2.8E-58 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal SYN_00154 b609b17da081b6b45ba86f9999efdc1a 323 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 59 227 3.2E-23 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SYN_00154 b609b17da081b6b45ba86f9999efdc1a 323 Gene3D G3DSA:3.40.50.970 20 109 6.0E-17 T 11-10-2018 SYN_00154 b609b17da081b6b45ba86f9999efdc1a 323 Gene3D G3DSA:3.40.50.970 110 319 4.3E-67 T 11-10-2018 SYN_00154 b609b17da081b6b45ba86f9999efdc1a 323 SUPERFAMILY SSF52518 16 318 2.32E-81 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold SYN_00795 509cf8937c20807bd37a50a53ae9b52f 363 Pfam PF04055 Radical SAM superfamily 20 185 1.7E-18 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_00795 509cf8937c20807bd37a50a53ae9b52f 363 SMART SM00729 13 232 2.0E-35 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SYN_00795 509cf8937c20807bd37a50a53ae9b52f 363 SUPERFAMILY SSF102114 16 273 7.46E-59 T 11-10-2018 SYN_00795 509cf8937c20807bd37a50a53ae9b52f 363 Pfam PF16199 Radical_SAM C-terminal domain 193 278 7.5E-19 T 11-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 SYN_00795 509cf8937c20807bd37a50a53ae9b52f 363 Gene3D G3DSA:3.80.30.20 3 257 3.9E-32 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe SYN_01724 c0d906885b4adc80414856a1d8f087b0 91 Gene3D G3DSA:4.10.520.10 1 91 4.3E-32 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 SYN_01724 c0d906885b4adc80414856a1d8f087b0 91 SMART SM00411 1 90 3.1E-36 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SYN_01724 c0d906885b4adc80414856a1d8f087b0 91 SUPERFAMILY SSF47729 1 90 2.94E-29 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 SYN_01724 c0d906885b4adc80414856a1d8f087b0 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.5E-31 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SYN_01724 c0d906885b4adc80414856a1d8f087b0 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 SYN_01724 c0d906885b4adc80414856a1d8f087b0 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.6E-13 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SYN_01724 c0d906885b4adc80414856a1d8f087b0 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.6E-13 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SYN_01724 c0d906885b4adc80414856a1d8f087b0 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.6E-13 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SYN_02507 acb303bade07b44e81fcb2e0995f2263 199 SUPERFAMILY SSF56925 28 199 1.91E-28 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel SYN_02507 acb303bade07b44e81fcb2e0995f2263 199 Pfam PF13505 Outer membrane protein beta-barrel domain 14 199 8.2E-22 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel SYN_02507 acb303bade07b44e81fcb2e0995f2263 199 Gene3D G3DSA:2.40.160.20 33 199 1.6E-23 T 11-10-2018 SYN_02737 3f2069b1aa995fb5b12e6383b33ebe54 139 SUPERFAMILY SSF46785 34 113 3.83E-10 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_02737 3f2069b1aa995fb5b12e6383b33ebe54 139 Gene3D G3DSA:1.10.10.10 34 122 6.4E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_01042 f9908392bca88e544132c62bb2edc89e 121 SUPERFAMILY SSF46785 2 110 6.73E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_01042 f9908392bca88e544132c62bb2edc89e 121 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 23 80 7.5E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SYN_01042 f9908392bca88e544132c62bb2edc89e 121 Gene3D G3DSA:1.10.10.10 1 121 1.0E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_02126 bac3195232786ad5c0609befaf2cce3a 394 SUPERFAMILY SSF53383 4 374 8.29E-110 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SYN_02126 bac3195232786ad5c0609befaf2cce3a 394 TIGRFAM TIGR03402 FeS_nifS: cysteine desulfurase NifS 4 382 2.8E-199 T 11-10-2018 IPR017772 Cysteine desulfurase NifS, bacterial/archaeal GO:0006520|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 SYN_02126 bac3195232786ad5c0609befaf2cce3a 394 Gene3D G3DSA:3.90.1150.10 4 372 1.3E-147 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SYN_02126 bac3195232786ad5c0609befaf2cce3a 394 Gene3D G3DSA:3.40.640.10 15 255 1.3E-147 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SYN_02126 bac3195232786ad5c0609befaf2cce3a 394 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 192 211 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SYN_02126 bac3195232786ad5c0609befaf2cce3a 394 PIRSF PIRSF005572 1 380 8.9E-138 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 SYN_02126 bac3195232786ad5c0609befaf2cce3a 394 Pfam PF00266 Aminotransferase class-V 4 364 1.9E-93 T 11-10-2018 IPR000192 Aminotransferase class V domain SYN_02189 a7caa00542b507b8ba2fb6b2728b2f9f 158 ProSitePatterns PS01317 SsrA-binding protein. 29 41 - T 11-10-2018 IPR020081 SsrA-binding protein, conserved site SYN_02189 a7caa00542b507b8ba2fb6b2728b2f9f 158 Pfam PF01668 SmpB protein 11 152 1.8E-60 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 SYN_02189 a7caa00542b507b8ba2fb6b2728b2f9f 158 Gene3D G3DSA:2.40.280.10 3 131 1.0E-52 T 11-10-2018 IPR023620 Small protein B SYN_02189 a7caa00542b507b8ba2fb6b2728b2f9f 158 SUPERFAMILY SSF74982 4 134 8.76E-53 T 11-10-2018 IPR023620 Small protein B SYN_02189 a7caa00542b507b8ba2fb6b2728b2f9f 158 TIGRFAM TIGR00086 smpB: SsrA-binding protein 11 151 3.5E-57 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 SYN_02189 a7caa00542b507b8ba2fb6b2728b2f9f 158 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 11 134 1.0E-40 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 SYN_02189 a7caa00542b507b8ba2fb6b2728b2f9f 158 Hamap MF_00023 SsrA-binding protein [smpB]. 1 157 71.476 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 SYN_00216 7f162d67088c9911798628f1fccf9347 266 Gene3D G3DSA:3.40.50.300 1 242 1.9E-66 T 11-10-2018 SYN_00216 7f162d67088c9911798628f1fccf9347 266 Pfam PF00005 ABC transporter 18 163 2.4E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_00216 7f162d67088c9911798628f1fccf9347 266 SUPERFAMILY SSF52540 2 224 2.25E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00216 7f162d67088c9911798628f1fccf9347 266 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_00216 7f162d67088c9911798628f1fccf9347 266 SMART SM00382 27 212 1.1E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_02848 5f8e4e6c6e645e336aad08614da3af24 275 PIRSF PIRSF006816 6 275 5.2E-59 T 11-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 SYN_02848 5f8e4e6c6e645e336aad08614da3af24 275 Hamap MF_01211 Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit [pyrK]. 7 273 32.824 T 11-10-2018 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit SYN_02848 5f8e4e6c6e645e336aad08614da3af24 275 SUPERFAMILY SSF63380 11 105 2.0E-12 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel SYN_02848 5f8e4e6c6e645e336aad08614da3af24 275 PRINTS PR00409 Phthalate dioxygenase reductase family signature 115 134 2.0E-6 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 SYN_02848 5f8e4e6c6e645e336aad08614da3af24 275 PRINTS PR00409 Phthalate dioxygenase reductase family signature 201 209 2.0E-6 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 SYN_02848 5f8e4e6c6e645e336aad08614da3af24 275 Gene3D G3DSA:2.10.240.10 230 271 2.5E-15 T 11-10-2018 IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily SYN_02848 5f8e4e6c6e645e336aad08614da3af24 275 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 230 269 1.2E-17 T 11-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain SYN_02848 5f8e4e6c6e645e336aad08614da3af24 275 Gene3D G3DSA:2.40.30.10 6 103 1.1E-20 T 11-10-2018 SYN_02848 5f8e4e6c6e645e336aad08614da3af24 275 Gene3D G3DSA:3.40.50.80 108 222 5.4E-24 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain SYN_02848 5f8e4e6c6e645e336aad08614da3af24 275 Pfam PF00175 Oxidoreductase NAD-binding domain 116 213 1.3E-6 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 SYN_02848 5f8e4e6c6e645e336aad08614da3af24 275 SUPERFAMILY SSF52343 100 270 2.62E-35 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain SYN_02638 3b051892c2a9ae7b5c9d91dc98d54afe 706 Pfam PF02665 Nitrate reductase gamma subunit 133 261 4.0E-7 T 11-10-2018 IPR023234 NarG-like domain SYN_02638 3b051892c2a9ae7b5c9d91dc98d54afe 706 Gene3D G3DSA:1.10.1060.10 274 410 4.8E-7 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SYN_02638 3b051892c2a9ae7b5c9d91dc98d54afe 706 Gene3D G3DSA:1.20.950.20 83 261 7.7E-9 T 11-10-2018 SYN_02638 3b051892c2a9ae7b5c9d91dc98d54afe 706 Pfam PF02754 Cysteine-rich domain 578 665 3.0E-20 T 11-10-2018 IPR004017 Cysteine-rich domain SYN_02638 3b051892c2a9ae7b5c9d91dc98d54afe 706 Pfam PF02754 Cysteine-rich domain 454 539 1.9E-14 T 11-10-2018 IPR004017 Cysteine-rich domain SYN_02638 3b051892c2a9ae7b5c9d91dc98d54afe 706 SUPERFAMILY SSF103501 28 267 1.83E-32 T 11-10-2018 IPR036197 NarG-like superfamily SYN_02638 3b051892c2a9ae7b5c9d91dc98d54afe 706 Pfam PF13237 4Fe-4S dicluster domain 296 385 9.6E-10 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_02638 3b051892c2a9ae7b5c9d91dc98d54afe 706 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 301 312 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_02638 3b051892c2a9ae7b5c9d91dc98d54afe 706 SUPERFAMILY SSF46548 287 402 4.71E-18 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SYN_00435 feb77094562f2c9fb72a060dbb7a718a 152 Gene3D G3DSA:2.40.50.180 25 91 9.1E-28 T 11-10-2018 SYN_00435 feb77094562f2c9fb72a060dbb7a718a 152 Gene3D G3DSA:2.30.30.40 8 130 9.1E-28 T 11-10-2018 SYN_00435 feb77094562f2c9fb72a060dbb7a718a 152 SMART SM00260 2 137 3.2E-14 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 SYN_00435 feb77094562f2c9fb72a060dbb7a718a 152 Pfam PF01584 CheW-like domain 6 135 5.8E-25 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 SYN_00435 feb77094562f2c9fb72a060dbb7a718a 152 SUPERFAMILY SSF50341 6 139 2.62E-30 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 SYN_00411 29b57547740af7765731a244a8b51485 259 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 11 259 5.3E-84 T 11-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria SYN_00411 29b57547740af7765731a244a8b51485 259 Pfam PF02405 Permease MlaE 46 257 1.0E-82 T 11-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 SYN_01947 4d9fe86d698105f9355bc9ba7b1458d5 494 Gene3D G3DSA:3.60.120.10 1 491 9.6E-195 T 11-10-2018 IPR005801 ADC synthase GO:0009058 SYN_01947 4d9fe86d698105f9355bc9ba7b1458d5 494 SUPERFAMILY SSF56322 16 488 7.98E-166 T 11-10-2018 IPR005801 ADC synthase GO:0009058 SYN_01947 4d9fe86d698105f9355bc9ba7b1458d5 494 Pfam PF00425 chorismate binding enzyme 224 477 3.8E-102 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal SYN_01947 4d9fe86d698105f9355bc9ba7b1458d5 494 PRINTS PR00095 Anthranilate synthase component I signature 325 338 2.5E-25 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 SYN_01947 4d9fe86d698105f9355bc9ba7b1458d5 494 PRINTS PR00095 Anthranilate synthase component I signature 339 352 2.5E-25 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 SYN_01947 4d9fe86d698105f9355bc9ba7b1458d5 494 PRINTS PR00095 Anthranilate synthase component I signature 419 433 2.5E-25 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 SYN_01947 4d9fe86d698105f9355bc9ba7b1458d5 494 PRINTS PR00095 Anthranilate synthase component I signature 434 448 2.5E-25 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 SYN_01947 4d9fe86d698105f9355bc9ba7b1458d5 494 Pfam PF04715 Anthranilate synthase component I, N terminal region 28 167 4.5E-37 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 SYN_01947 4d9fe86d698105f9355bc9ba7b1458d5 494 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 28 485 2.1E-175 T 11-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 SYN_01156 925fc1d5a2fbeba6c545aebebbd68670 824 SUPERFAMILY SSF52540 34 574 1.24E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01156 925fc1d5a2fbeba6c545aebebbd68670 824 SUPERFAMILY SSF54211 579 771 5.69E-35 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SYN_01156 925fc1d5a2fbeba6c545aebebbd68670 824 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 691 710 4.1E-12 T 11-10-2018 SYN_01156 925fc1d5a2fbeba6c545aebebbd68670 824 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 580 596 4.1E-12 T 11-10-2018 SYN_01156 925fc1d5a2fbeba6c545aebebbd68670 824 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 65 84 4.1E-12 T 11-10-2018 SYN_01156 925fc1d5a2fbeba6c545aebebbd68670 824 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 721 739 4.1E-12 T 11-10-2018 SYN_01156 925fc1d5a2fbeba6c545aebebbd68670 824 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 661 680 4.1E-12 T 11-10-2018 SYN_01156 925fc1d5a2fbeba6c545aebebbd68670 824 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 664 767 1.6E-9 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 SYN_01156 925fc1d5a2fbeba6c545aebebbd68670 824 Gene3D G3DSA:1.10.8.60 465 551 1.6E-11 T 11-10-2018 SYN_01156 925fc1d5a2fbeba6c545aebebbd68670 824 Gene3D G3DSA:3.40.50.300 9 188 8.9E-28 T 11-10-2018 SYN_01156 925fc1d5a2fbeba6c545aebebbd68670 824 Gene3D G3DSA:3.40.50.300 273 464 6.5E-50 T 11-10-2018 SYN_01156 925fc1d5a2fbeba6c545aebebbd68670 824 Gene3D G3DSA:3.30.230.10 555 798 1.1E-100 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SYN_01156 925fc1d5a2fbeba6c545aebebbd68670 824 Pfam PF13654 AAA domain 29 554 1.6E-167 T 11-10-2018 SYN_01437 e377f61cfbb81e7e734281a396a0532a 90 Pfam PF00313 'Cold-shock' DNA-binding domain 27 89 5.3E-29 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SYN_01437 e377f61cfbb81e7e734281a396a0532a 90 Gene3D G3DSA:2.40.50.140 25 88 7.8E-29 T 11-10-2018 SYN_01437 e377f61cfbb81e7e734281a396a0532a 90 SMART SM00357 27 90 1.3E-25 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 SYN_01437 e377f61cfbb81e7e734281a396a0532a 90 ProSitePatterns PS00352 'Cold-shock' domain signature. 39 57 - T 11-10-2018 IPR019844 Cold-shock conserved site SYN_01437 e377f61cfbb81e7e734281a396a0532a 90 PRINTS PR00050 Cold shock protein signature 48 57 4.7E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SYN_01437 e377f61cfbb81e7e734281a396a0532a 90 PRINTS PR00050 Cold shock protein signature 63 81 4.7E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SYN_01437 e377f61cfbb81e7e734281a396a0532a 90 PRINTS PR00050 Cold shock protein signature 28 43 4.7E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SYN_01437 e377f61cfbb81e7e734281a396a0532a 90 SUPERFAMILY SSF50249 23 89 3.64E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_01437 e377f61cfbb81e7e734281a396a0532a 90 PIRSF PIRSF002599 21 90 2.3E-24 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 SYN_02151 4d70f1ed626bcbbd18e0a9d3adbe4abf 310 SUPERFAMILY SSF56349 112 304 1.94E-51 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SYN_02151 4d70f1ed626bcbbd18e0a9d3adbe4abf 310 Gene3D G3DSA:1.10.443.10 116 300 4.3E-57 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 SYN_02151 4d70f1ed626bcbbd18e0a9d3adbe4abf 310 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 7 307 3.1E-101 T 11-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 SYN_02151 4d70f1ed626bcbbd18e0a9d3adbe4abf 310 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 306 56.815 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD SYN_02151 4d70f1ed626bcbbd18e0a9d3adbe4abf 310 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 92 1.5E-17 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SYN_02151 4d70f1ed626bcbbd18e0a9d3adbe4abf 310 SUPERFAMILY SSF47823 3 102 1.49E-13 T 11-10-2018 SYN_02151 4d70f1ed626bcbbd18e0a9d3adbe4abf 310 Gene3D G3DSA:1.10.150.130 2 104 3.3E-22 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal SYN_02151 4d70f1ed626bcbbd18e0a9d3adbe4abf 310 Pfam PF00589 Phage integrase family 133 291 1.9E-42 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SYN_01513 d26c342049e23090f5871cfa753dae49 455 Pfam PF01637 ATPase domain predominantly from Archaea 3 202 3.7E-23 T 11-10-2018 IPR011579 ATPase domain GO:0005524 SYN_01513 d26c342049e23090f5871cfa753dae49 455 Pfam PF03008 Archaea bacterial proteins of unknown function 312 400 3.3E-25 T 11-10-2018 IPR004256 Domain of unknown function DUF234, DEXX-box ATPase C-terminal SYN_01513 d26c342049e23090f5871cfa753dae49 455 SUPERFAMILY SSF52540 1 242 6.82E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01513 d26c342049e23090f5871cfa753dae49 455 SUPERFAMILY SSF46785 241 323 2.32E-5 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_01513 d26c342049e23090f5871cfa753dae49 455 SUPERFAMILY SSF52980 349 452 5.63E-7 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 SYN_01513 d26c342049e23090f5871cfa753dae49 455 Gene3D G3DSA:3.40.50.300 1 168 1.5E-30 T 11-10-2018 SYN_01943 75b22bbda8d8ac6126398a7b931d4425 230 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 2 204 38.872 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 SYN_01943 75b22bbda8d8ac6126398a7b931d4425 230 Gene3D G3DSA:3.20.20.70 1 203 1.0E-68 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_01943 75b22bbda8d8ac6126398a7b931d4425 230 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 5 198 4.3E-44 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 SYN_01943 75b22bbda8d8ac6126398a7b931d4425 230 SUPERFAMILY SSF51366 3 202 1.19E-58 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 SYN_02472 0666adf93e71d82d1a0dfe250a35d6e6 96 Pfam PF09827 CRISPR associated protein Cas2 1 78 4.8E-24 T 11-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 SYN_02472 0666adf93e71d82d1a0dfe250a35d6e6 96 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 1 92 3.2E-18 T 11-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 SYN_02472 0666adf93e71d82d1a0dfe250a35d6e6 96 PIRSF PIRSF032582 1 96 3.4E-39 T 11-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 SYN_02472 0666adf93e71d82d1a0dfe250a35d6e6 96 Gene3D G3DSA:3.30.70.240 1 96 1.1E-36 T 11-10-2018 SYN_02472 0666adf93e71d82d1a0dfe250a35d6e6 96 SUPERFAMILY SSF143430 1 89 1.31E-27 T 11-10-2018 SYN_02472 0666adf93e71d82d1a0dfe250a35d6e6 96 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 1 95 15.313 T 11-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 SYN_03628 1dab30d73eefeca8858978d013b53440 284 Gene3D G3DSA:3.30.2010.10 56 147 1.5E-31 T 11-10-2018 SYN_03628 1dab30d73eefeca8858978d013b53440 284 Pfam PF01435 Peptidase family M48 64 281 1.0E-34 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SYN_03628 1dab30d73eefeca8858978d013b53440 284 Hamap MF_00188 Protease HtpX [htpX]. 3 281 30.034 T 11-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 SYN_02289 3046cfa280bfe1ccf577eb0a221dee87 428 ProDom PD332323 CIRCULATION DNA PROTEIN TAIL/DNA PHAGE PROPHAGE VIRION FLUMU BACTERIOPHAGE MU-LIKE 12 118 3.0E-6 T 11-10-2018 IPR009826 DNA circulation, N-terminal SYN_02289 3046cfa280bfe1ccf577eb0a221dee87 428 Pfam PF07157 DNA circularisation protein N-terminus 8 93 9.8E-19 T 11-10-2018 IPR009826 DNA circulation, N-terminal SYN_01970 8f1e9f7335d3c5496fb7f1f227f859f6 460 SUPERFAMILY SSF53448 36 297 3.31E-12 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_01970 8f1e9f7335d3c5496fb7f1f227f859f6 460 Gene3D G3DSA:3.90.550.10 34 294 3.3E-6 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_01680 492a935b6375a16dff593dcd6ebdae4d 251 SUPERFAMILY SSF51735 5 248 3.03E-78 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_01680 492a935b6375a16dff593dcd6ebdae4d 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SYN_01680 492a935b6375a16dff593dcd6ebdae4d 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 9.6E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SYN_01680 492a935b6375a16dff593dcd6ebdae4d 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 9.6E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SYN_01680 492a935b6375a16dff593dcd6ebdae4d 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 9.6E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SYN_01680 492a935b6375a16dff593dcd6ebdae4d 251 Gene3D G3DSA:3.40.50.720 6 249 1.7E-77 T 11-10-2018 SYN_01680 492a935b6375a16dff593dcd6ebdae4d 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 248 3.2E-58 T 11-10-2018 SYN_01680 492a935b6375a16dff593dcd6ebdae4d 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.4E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SYN_01680 492a935b6375a16dff593dcd6ebdae4d 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.4E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SYN_01680 492a935b6375a16dff593dcd6ebdae4d 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.4E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SYN_01680 492a935b6375a16dff593dcd6ebdae4d 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.4E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SYN_01680 492a935b6375a16dff593dcd6ebdae4d 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.4E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SYN_01680 492a935b6375a16dff593dcd6ebdae4d 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 2.4E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SYN_01106 71127b12f8e4ec60068474df79bf7bdd 384 Pfam PF00534 Glycosyl transferases group 1 180 355 1.0E-36 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 SYN_01106 71127b12f8e4ec60068474df79bf7bdd 384 SUPERFAMILY SSF53756 10 376 1.57E-66 T 11-10-2018 SYN_01106 71127b12f8e4ec60068474df79bf7bdd 384 Pfam PF13439 Glycosyltransferase Family 4 78 172 9.5E-8 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 SYN_01106 71127b12f8e4ec60068474df79bf7bdd 384 Gene3D G3DSA:3.40.50.2000 1 179 2.7E-15 T 11-10-2018 SYN_01106 71127b12f8e4ec60068474df79bf7bdd 384 Gene3D G3DSA:3.40.50.2000 180 360 6.9E-40 T 11-10-2018 SYN_02857 80725360da7fb1b559ea746d58ee1a73 341 SUPERFAMILY SSF52374 16 340 1.28E-87 T 11-10-2018 SYN_02857 80725360da7fb1b559ea746d58ee1a73 341 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 16 339 3.6E-85 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 SYN_02857 80725360da7fb1b559ea746d58ee1a73 341 Pfam PF00579 tRNA synthetases class I (W and Y) 17 293 7.3E-65 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_02857 80725360da7fb1b559ea746d58ee1a73 341 Gene3D G3DSA:3.40.50.620 18 339 1.3E-115 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_02857 80725360da7fb1b559ea746d58ee1a73 341 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 159 180 1.3E-24 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 SYN_02857 80725360da7fb1b559ea746d58ee1a73 341 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 28 44 1.3E-24 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 SYN_02857 80725360da7fb1b559ea746d58ee1a73 341 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 209 219 1.3E-24 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 SYN_02857 80725360da7fb1b559ea746d58ee1a73 341 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 81 100 1.3E-24 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 SYN_02857 80725360da7fb1b559ea746d58ee1a73 341 Gene3D G3DSA:1.10.240.10 204 309 1.3E-115 T 11-10-2018 SYN_02857 80725360da7fb1b559ea746d58ee1a73 341 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 24 33 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_00969 53563532e901f7a41a35756f142714c5 160 SUPERFAMILY SSF64438 4 156 7.14E-42 T 11-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic SYN_00969 53563532e901f7a41a35756f142714c5 160 Pfam PF03975 CheD chemotactic sensory transduction 48 152 1.3E-29 T 11-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 SYN_00969 53563532e901f7a41a35756f142714c5 160 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 9 156 24.086 T 11-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 SYN_00969 53563532e901f7a41a35756f142714c5 160 Gene3D G3DSA:3.30.1330.200 2 158 1.3E-45 T 11-10-2018 IPR038592 CheD-like superfamily SYN_01794 57e79094126f705f3956f8812eb8443e 316 SUPERFAMILY SSF53335 31 308 6.57E-58 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_01794 57e79094126f705f3956f8812eb8443e 316 Pfam PF05175 Methyltransferase small domain 142 222 1.1E-17 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 SYN_01794 57e79094126f705f3956f8812eb8443e 316 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 29 311 5.8E-79 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 SYN_01794 57e79094126f705f3956f8812eb8443e 316 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 53 306 1.9E-92 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 SYN_01794 57e79094126f705f3956f8812eb8443e 316 Gene3D G3DSA:3.40.50.150 114 315 3.2E-68 T 11-10-2018 SYN_01794 57e79094126f705f3956f8812eb8443e 316 Gene3D G3DSA:1.10.8.10 29 113 4.5E-23 T 11-10-2018 SYN_01794 57e79094126f705f3956f8812eb8443e 316 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 213 219 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SYN_01794 57e79094126f705f3956f8812eb8443e 316 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 31 310 43.922 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 SYN_00875 d20197e8670d373e67b31291bb097aca 363 Pfam PF00196 Bacterial regulatory proteins, luxR family 303 350 8.7E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_00875 d20197e8670d373e67b31291bb097aca 363 SUPERFAMILY SSF46894 290 350 1.46E-14 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SYN_00875 d20197e8670d373e67b31291bb097aca 363 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 318 334 3.9E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_00875 d20197e8670d373e67b31291bb097aca 363 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 334 346 3.9E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_00875 d20197e8670d373e67b31291bb097aca 363 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 304 318 3.9E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_00875 d20197e8670d373e67b31291bb097aca 363 Gene3D G3DSA:1.10.10.10 293 358 1.1E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_00875 d20197e8670d373e67b31291bb097aca 363 Pfam PF00072 Response regulator receiver domain 5 117 2.6E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00875 d20197e8670d373e67b31291bb097aca 363 Gene3D G3DSA:3.40.50.12740 1 219 1.5E-42 T 11-10-2018 SYN_00875 d20197e8670d373e67b31291bb097aca 363 SMART SM00448 3 116 1.5E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00875 d20197e8670d373e67b31291bb097aca 363 SMART SM00421 301 359 5.3E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_00875 d20197e8670d373e67b31291bb097aca 363 ProSitePatterns PS00622 LuxR-type HTH domain signature. 318 345 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SYN_00875 d20197e8670d373e67b31291bb097aca 363 SUPERFAMILY SSF52172 4 128 7.26E-38 T 11-10-2018 IPR011006 CheY-like superfamily SYN_02110 d64cb97852fc92fb34cf83694efaa605 180 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 154 174 7.1E-9 T 11-10-2018 SYN_02110 d64cb97852fc92fb34cf83694efaa605 180 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 116 133 7.1E-9 T 11-10-2018 SYN_02110 d64cb97852fc92fb34cf83694efaa605 180 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 134 153 7.1E-9 T 11-10-2018 SYN_02110 d64cb97852fc92fb34cf83694efaa605 180 Pfam PF13488 Glycine zipper 2 39 1.4E-8 T 11-10-2018 IPR039567 Glycine zipper domain SYN_02110 d64cb97852fc92fb34cf83694efaa605 180 Pfam PF00691 OmpA family 70 165 1.6E-27 T 11-10-2018 IPR006665 OmpA-like domain SYN_02110 d64cb97852fc92fb34cf83694efaa605 180 Gene3D G3DSA:3.30.1330.60 33 179 1.4E-48 T 11-10-2018 IPR036737 OmpA-like domain superfamily SYN_02110 d64cb97852fc92fb34cf83694efaa605 180 SUPERFAMILY SSF103088 52 171 5.62E-43 T 11-10-2018 IPR036737 OmpA-like domain superfamily SYN_02110 d64cb97852fc92fb34cf83694efaa605 180 PRINTS PR01021 OMPA domain signature 101 116 6.5E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SYN_02110 d64cb97852fc92fb34cf83694efaa605 180 PRINTS PR01021 OMPA domain signature 116 132 6.5E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SYN_02110 d64cb97852fc92fb34cf83694efaa605 180 PRINTS PR01021 OMPA domain signature 71 93 6.5E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SYN_00500 ccfad46d4f149821ac4076252f07f9f5 345 Gene3D G3DSA:3.60.15.10 16 317 2.0E-36 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_00500 ccfad46d4f149821ac4076252f07f9f5 345 SUPERFAMILY SSF56281 17 278 4.98E-18 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_00543 dd2ce060c0c82dc2f4ecef068b34ff34 135 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 7 131 3.5E-34 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00543 dd2ce060c0c82dc2f4ecef068b34ff34 135 Gene3D G3DSA:1.20.5.440 90 134 1.0E-10 T 11-10-2018 SYN_00543 dd2ce060c0c82dc2f4ecef068b34ff34 135 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 75 4.0E-9 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00543 dd2ce060c0c82dc2f4ecef068b34ff34 135 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 7 83 1.0E-25 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00543 dd2ce060c0c82dc2f4ecef068b34ff34 135 Gene3D G3DSA:2.60.15.10 4 89 5.8E-26 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00543 dd2ce060c0c82dc2f4ecef068b34ff34 135 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 19.329 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00543 dd2ce060c0c82dc2f4ecef068b34ff34 135 SUPERFAMILY SSF46604 89 132 2.88E-5 T 11-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00543 dd2ce060c0c82dc2f4ecef068b34ff34 135 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 133 1.1E-9 T 11-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain SYN_00543 dd2ce060c0c82dc2f4ecef068b34ff34 135 SUPERFAMILY SSF51344 5 84 4.97E-21 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_00925 e416ae4cc798993b8f29aa7640657ce0 139 Hamap MF_00984 Single-stranded DNA-binding protein. 2 109 35.819 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 SYN_00925 e416ae4cc798993b8f29aa7640657ce0 139 Gene3D G3DSA:2.40.50.140 1 121 1.5E-48 T 11-10-2018 SYN_00925 e416ae4cc798993b8f29aa7640657ce0 139 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 116 6.3E-48 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 SYN_00925 e416ae4cc798993b8f29aa7640657ce0 139 PIRSF PIRSF002070 1 131 2.8E-40 T 11-10-2018 SYN_00925 e416ae4cc798993b8f29aa7640657ce0 139 SUPERFAMILY SSF50249 1 139 5.83E-54 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_00925 e416ae4cc798993b8f29aa7640657ce0 139 Pfam PF00436 Single-strand binding protein family 2 105 7.1E-42 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 SYN_02121 84d796014481b6ea11a4bdb89786b777 319 Pfam PF03466 LysR substrate binding domain 102 310 1.4E-45 T 11-10-2018 IPR005119 LysR, substrate-binding SYN_02121 84d796014481b6ea11a4bdb89786b777 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 76 2.0E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SYN_02121 84d796014481b6ea11a4bdb89786b777 319 Gene3D G3DSA:3.40.190.10 108 294 2.1E-41 T 11-10-2018 SYN_02121 84d796014481b6ea11a4bdb89786b777 319 SUPERFAMILY SSF46785 8 125 2.4E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_02121 84d796014481b6ea11a4bdb89786b777 319 Gene3D G3DSA:1.10.10.10 15 104 6.9E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_02121 84d796014481b6ea11a4bdb89786b777 319 Gene3D G3DSA:3.40.190.10 178 285 2.1E-41 T 11-10-2018 SYN_02121 84d796014481b6ea11a4bdb89786b777 319 SUPERFAMILY SSF53850 104 310 1.56E-44 T 11-10-2018 SYN_02501 e96bd7f7cd2a89e074c3c0ba01df4ecd 398 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 10 389 1.8E-139 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 SYN_02501 e96bd7f7cd2a89e074c3c0ba01df4ecd 398 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 266 290 - T 11-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_02501 e96bd7f7cd2a89e074c3c0ba01df4ecd 398 Pfam PF08442 ATP-grasp domain 11 211 3.3E-61 T 11-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 SYN_02501 e96bd7f7cd2a89e074c3c0ba01df4ecd 398 Gene3D G3DSA:3.30.470.20 10 242 3.3E-78 T 11-10-2018 SYN_02501 e96bd7f7cd2a89e074c3c0ba01df4ecd 398 PIRSF PIRSF001554 10 397 1.1E-136 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 SYN_02501 e96bd7f7cd2a89e074c3c0ba01df4ecd 398 SUPERFAMILY SSF52210 249 390 6.02E-47 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_02501 e96bd7f7cd2a89e074c3c0ba01df4ecd 398 Gene3D G3DSA:3.30.1490.20 30 113 3.3E-78 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 SYN_02501 e96bd7f7cd2a89e074c3c0ba01df4ecd 398 Gene3D G3DSA:3.40.50.261 249 394 6.5E-49 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_02501 e96bd7f7cd2a89e074c3c0ba01df4ecd 398 SUPERFAMILY SSF56059 10 246 1.67E-68 T 11-10-2018 SYN_02501 e96bd7f7cd2a89e074c3c0ba01df4ecd 398 Pfam PF00549 CoA-ligase 271 382 2.9E-19 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_02501 e96bd7f7cd2a89e074c3c0ba01df4ecd 398 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 10 395 38.883 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 SYN_01108 5d2f929a8b74395c50959d4d508c1ccd 364 SUPERFAMILY SSF53448 15 223 4.16E-38 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_01108 5d2f929a8b74395c50959d4d508c1ccd 364 Pfam PF00535 Glycosyl transferase family 2 19 138 4.8E-17 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 SYN_01108 5d2f929a8b74395c50959d4d508c1ccd 364 Gene3D G3DSA:3.90.550.10 4 253 5.5E-34 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_00899 4f6231f6f011ece2cbc3496123f77660 149 SUPERFAMILY SSF69500 1 145 4.32E-55 T 11-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily SYN_00899 4f6231f6f011ece2cbc3496123f77660 149 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 33.695 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 SYN_00899 4f6231f6f011ece2cbc3496123f77660 149 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 146 1.7E-53 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 SYN_00899 4f6231f6f011ece2cbc3496123f77660 149 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 1.4E-53 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 SYN_00899 4f6231f6f011ece2cbc3496123f77660 149 Gene3D G3DSA:3.50.80.10 1 148 7.8E-56 T 11-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily SYN_00305 21f39e87c052996c832f4befe51c6780 277 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 112 138 5.7E-41 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SYN_00305 21f39e87c052996c832f4befe51c6780 277 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 17 44 5.7E-41 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SYN_00305 21f39e87c052996c832f4befe51c6780 277 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 94 112 5.7E-41 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SYN_00305 21f39e87c052996c832f4befe51c6780 277 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 163 191 5.7E-41 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SYN_00305 21f39e87c052996c832f4befe51c6780 277 Pfam PF00902 Sec-independent protein translocase protein (TatC) 21 231 1.2E-72 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SYN_00305 21f39e87c052996c832f4befe51c6780 277 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 4 250 18.544 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SYN_00305 21f39e87c052996c832f4befe51c6780 277 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 18 236 7.3E-67 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 SYN_00169 91973799a6c34f231e6428b07873eb76 277 Gene3D G3DSA:3.10.310.10 3 265 2.3E-79 T 11-10-2018 SYN_00169 91973799a6c34f231e6428b07873eb76 277 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 2 267 6.1E-78 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 SYN_00169 91973799a6c34f231e6428b07873eb76 277 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 11-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 SYN_00169 91973799a6c34f231e6428b07873eb76 277 Pfam PF01678 Diaminopimelate epimerase 4 116 7.5E-30 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 SYN_00169 91973799a6c34f231e6428b07873eb76 277 Pfam PF01678 Diaminopimelate epimerase 143 260 1.3E-14 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 SYN_00169 91973799a6c34f231e6428b07873eb76 277 SUPERFAMILY SSF54506 2 122 8.03E-36 T 11-10-2018 SYN_00169 91973799a6c34f231e6428b07873eb76 277 Gene3D G3DSA:3.10.310.10 115 256 2.3E-79 T 11-10-2018 SYN_00169 91973799a6c34f231e6428b07873eb76 277 SUPERFAMILY SSF54506 125 266 3.28E-32 T 11-10-2018 SYN_00169 91973799a6c34f231e6428b07873eb76 277 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 2 269 32.286 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 SYN_01597 ab7f674a72b24be46d5aea37103b64a8 72 Gene3D G3DSA:2.40.50.140 1 72 5.5E-38 T 11-10-2018 SYN_01597 ab7f674a72b24be46d5aea37103b64a8 72 SUPERFAMILY SSF50249 1 70 8.0E-29 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_01597 ab7f674a72b24be46d5aea37103b64a8 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 28.046 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 SYN_01597 ab7f674a72b24be46d5aea37103b64a8 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 3.1E-30 T 11-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 SYN_01597 ab7f674a72b24be46d5aea37103b64a8 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 4.1E-39 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 SYN_01597 ab7f674a72b24be46d5aea37103b64a8 72 SMART SM00316 4 72 4.4E-7 T 11-10-2018 IPR022967 RNA-binding domain, S1 SYN_01409 54dbad6cf6d6e5a1613ba2efdca218ae 643 Pfam PF00330 Aconitase family (aconitate hydratase) 7 407 4.2E-105 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 SYN_01409 54dbad6cf6d6e5a1613ba2efdca218ae 643 Pfam PF00694 Aconitase C-terminal domain 505 581 8.3E-24 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 SYN_01409 54dbad6cf6d6e5a1613ba2efdca218ae 643 Gene3D G3DSA:3.20.19.10 467 643 2.1E-48 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 SYN_01409 54dbad6cf6d6e5a1613ba2efdca218ae 643 SUPERFAMILY SSF53732 1 429 1.44E-141 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 SYN_01409 54dbad6cf6d6e5a1613ba2efdca218ae 643 ProSitePatterns PS00450 Aconitase family signature 1. 289 305 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 SYN_01409 54dbad6cf6d6e5a1613ba2efdca218ae 643 Gene3D G3DSA:3.30.499.20 4 267 6.8E-82 T 11-10-2018 SYN_01409 54dbad6cf6d6e5a1613ba2efdca218ae 643 SUPERFAMILY SSF52016 445 642 3.14E-52 T 11-10-2018 SYN_01409 54dbad6cf6d6e5a1613ba2efdca218ae 643 Gene3D G3DSA:3.30.499.10 270 437 1.1E-47 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 SYN_01409 54dbad6cf6d6e5a1613ba2efdca218ae 643 PRINTS PR00415 Aconitase family signature 124 139 1.6E-21 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 SYN_01409 54dbad6cf6d6e5a1613ba2efdca218ae 643 PRINTS PR00415 Aconitase family signature 349 362 1.6E-21 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 SYN_01409 54dbad6cf6d6e5a1613ba2efdca218ae 643 PRINTS PR00415 Aconitase family signature 186 199 1.6E-21 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 SYN_01409 54dbad6cf6d6e5a1613ba2efdca218ae 643 PRINTS PR00415 Aconitase family signature 200 213 1.6E-21 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 SYN_01409 54dbad6cf6d6e5a1613ba2efdca218ae 643 PRINTS PR00415 Aconitase family signature 90 98 1.6E-21 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 SYN_01409 54dbad6cf6d6e5a1613ba2efdca218ae 643 PRINTS PR00415 Aconitase family signature 110 123 1.6E-21 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 SYN_01409 54dbad6cf6d6e5a1613ba2efdca218ae 643 TIGRFAM TIGR01342 acon_putative: putative aconitate hydratase 4 641 1.7E-266 T 11-10-2018 IPR006250 Aconitase, putative SYN_02559 1735f7d2804bf0e5a4f2cef5c1df8c0e 291 Gene3D G3DSA:3.10.129.10 138 291 9.2E-50 T 11-10-2018 SYN_02559 1735f7d2804bf0e5a4f2cef5c1df8c0e 291 Pfam PF02915 Rubrerythrin 10 125 1.8E-14 T 11-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 SYN_02559 1735f7d2804bf0e5a4f2cef5c1df8c0e 291 Gene3D G3DSA:1.20.1260.10 1 132 1.1E-32 T 11-10-2018 IPR012347 Ferritin-like SYN_02559 1735f7d2804bf0e5a4f2cef5c1df8c0e 291 Pfam PF03061 Thioesterase superfamily 159 227 9.7E-15 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 SYN_02559 1735f7d2804bf0e5a4f2cef5c1df8c0e 291 SUPERFAMILY SSF47240 3 130 2.11E-29 T 11-10-2018 IPR009078 Ferritin-like superfamily SYN_02559 1735f7d2804bf0e5a4f2cef5c1df8c0e 291 SUPERFAMILY SSF54637 137 290 7.64E-37 T 11-10-2018 IPR029069 HotDog domain superfamily SYN_01061 8c821b0f403f0fb3035c6afd209929d5 312 SUPERFAMILY SSF159713 40 294 2.62E-50 T 11-10-2018 SYN_01061 8c821b0f403f0fb3035c6afd209929d5 312 Gene3D G3DSA:3.40.50.11590 143 272 3.2E-17 T 11-10-2018 SYN_01061 8c821b0f403f0fb3035c6afd209929d5 312 Pfam PF04016 Putative heavy-metal chelation 145 294 2.2E-39 T 11-10-2018 IPR007161 Putative heavy-metal chelation domain SYN_01061 8c821b0f403f0fb3035c6afd209929d5 312 Pfam PF13938 Putative heavy-metal chelation 48 129 1.8E-11 T 11-10-2018 IPR025251 Domain of unknown function DUF4213 SYN_01860 88964543b501efc004041bcd5d9e4836 102 TIGRFAM TIGR02762 TraL_TIGR: type IV conjugative transfer system protein TraL 18 92 6.6E-8 T 11-10-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 SYN_01860 88964543b501efc004041bcd5d9e4836 102 Pfam PF07178 TraL protein 18 95 1.6E-11 T 11-10-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 SYN_02286 e3fae4f73525bad46934ae750cbc89fb 123 Pfam PF07409 Phage protein GP46 43 112 5.6E-18 T 11-10-2018 IPR010877 Bacteriophage Mu, Gp46 SYN_02286 e3fae4f73525bad46934ae750cbc89fb 123 SUPERFAMILY SSF160719 18 75 1.7E-6 T 11-10-2018 SYN_02286 e3fae4f73525bad46934ae750cbc89fb 123 Gene3D G3DSA:3.10.450.40 1 114 5.4E-7 T 11-10-2018 SYN_00342 ac3eaecdeb5897cbdb834f50dc96b27d 170 SMART SM00347 29 129 4.9E-16 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SYN_00342 ac3eaecdeb5897cbdb834f50dc96b27d 170 SUPERFAMILY SSF46785 22 139 1.15E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_00342 ac3eaecdeb5897cbdb834f50dc96b27d 170 Gene3D G3DSA:1.10.10.10 7 148 2.1E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_00342 ac3eaecdeb5897cbdb834f50dc96b27d 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 3.1E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SYN_00342 ac3eaecdeb5897cbdb834f50dc96b27d 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 3.1E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SYN_00342 ac3eaecdeb5897cbdb834f50dc96b27d 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 3.1E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SYN_00342 ac3eaecdeb5897cbdb834f50dc96b27d 170 Pfam PF01047 MarR family 36 93 1.1E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SYN_01652 3209239d455a63851a95a6d928c71005 391 Pfam PF00557 Metallopeptidase family M24 140 373 2.0E-37 T 11-10-2018 IPR000994 Peptidase M24 SYN_01652 3209239d455a63851a95a6d928c71005 391 SUPERFAMILY SSF53092 3 130 3.14E-22 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal SYN_01652 3209239d455a63851a95a6d928c71005 391 Gene3D G3DSA:3.40.350.10 9 132 2.7E-14 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal SYN_01652 3209239d455a63851a95a6d928c71005 391 SUPERFAMILY SSF55920 89 384 4.32E-51 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like SYN_01652 3209239d455a63851a95a6d928c71005 391 Gene3D G3DSA:3.90.230.10 133 388 3.6E-52 T 11-10-2018 SYN_01652 3209239d455a63851a95a6d928c71005 391 Pfam PF01321 Creatinase/Prolidase N-terminal domain 12 132 5.1E-19 T 11-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 SYN_02377 4d5b70f13d2bf01a8e8c463910153616 107 SUPERFAMILY SSF54736 23 106 3.14E-30 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SYN_02377 4d5b70f13d2bf01a8e8c463910153616 107 Gene3D G3DSA:3.30.1390.10 1 107 1.8E-42 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SYN_02377 4d5b70f13d2bf01a8e8c463910153616 107 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 25 103 3.4E-35 T 11-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 SYN_02377 4d5b70f13d2bf01a8e8c463910153616 107 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 20 102 26.197 T 11-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS SYN_02911 211c8eaaf6f0e117557ab77203e479e8 402 Pfam PF13173 AAA domain 24 140 3.1E-23 T 11-10-2018 SYN_02911 211c8eaaf6f0e117557ab77203e479e8 402 SUPERFAMILY SSF52540 16 140 5.47E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02911 211c8eaaf6f0e117557ab77203e479e8 402 Pfam PF13635 Domain of unknown function (DUF4143) 196 355 1.5E-30 T 11-10-2018 IPR025420 Domain of unknown function DUF4143 SYN_02806 0e7aa313be530633cb6617a41e67f48d 174 SUPERFAMILY SSF101116 27 141 2.09E-36 T 11-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 SYN_02806 0e7aa313be530633cb6617a41e67f48d 174 Pfam PF02561 Flagellar protein FliS 27 138 9.1E-38 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 SYN_02806 0e7aa313be530633cb6617a41e67f48d 174 Gene3D G3DSA:1.20.120.340 16 142 3.6E-41 T 11-10-2018 SYN_02806 0e7aa313be530633cb6617a41e67f48d 174 TIGRFAM TIGR00208 fliS: flagellar protein FliS 24 139 4.0E-26 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 SYN_01491 a4c2e860bedd2792f652fedf1775fe03 295 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 7 289 1.0E-68 T 11-10-2018 IPR017592 Pilus assembly, Flp-type CpaB SYN_01491 a4c2e860bedd2792f652fedf1775fe03 295 SUPERFAMILY SSF51269 41 101 2.16E-5 T 11-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 SYN_01491 a4c2e860bedd2792f652fedf1775fe03 295 Pfam PF13144 Chaperone for flagella basal body P-ring formation 30 111 1.5E-8 T 11-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal SYN_01491 a4c2e860bedd2792f652fedf1775fe03 295 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 112 219 5.4E-31 T 11-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain SYN_01491 a4c2e860bedd2792f652fedf1775fe03 295 SMART SM00858 42 104 2.4E-12 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 SYN_00190 02c6e4a2d027884703c1abd6effab0ad 280 SMART SM00028 196 229 81.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00190 02c6e4a2d027884703c1abd6effab0ad 280 SMART SM00028 159 192 85.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00190 02c6e4a2d027884703c1abd6effab0ad 280 SMART SM00028 233 266 19.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00190 02c6e4a2d027884703c1abd6effab0ad 280 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 3 279 18.462 T 11-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 SYN_00190 02c6e4a2d027884703c1abd6effab0ad 280 Pfam PF10874 Protein of unknown function (DUF2746) 6 95 5.6E-5 T 11-10-2018 IPR022704 Protein of unknown function DUF2746 SYN_00190 02c6e4a2d027884703c1abd6effab0ad 280 Gene3D G3DSA:1.25.40.10 146 280 2.7E-33 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00190 02c6e4a2d027884703c1abd6effab0ad 280 SUPERFAMILY SSF48452 159 278 4.93E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00190 02c6e4a2d027884703c1abd6effab0ad 280 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 160 276 1.9E-35 T 11-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal SYN_00190 02c6e4a2d027884703c1abd6effab0ad 280 Pfam PF13525 Outer membrane lipoprotein 159 280 8.0E-10 T 11-10-2018 IPR039565 Outer membrane lipoprotein BamD-like SYN_00691 c82dd64fc6c9e95b656c72fab1fcbfba 304 SUPERFAMILY SSF52518 21 292 1.09E-73 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold SYN_00691 c82dd64fc6c9e95b656c72fab1fcbfba 304 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 65 211 3.7E-24 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SYN_00691 c82dd64fc6c9e95b656c72fab1fcbfba 304 Gene3D G3DSA:3.40.50.970 95 302 9.3E-67 T 11-10-2018 SYN_00691 c82dd64fc6c9e95b656c72fab1fcbfba 304 Gene3D G3DSA:3.40.50.970 15 94 6.0E-7 T 11-10-2018 SYN_03153 2e5fc9caf00964d4b8f8a16543dd37cf 509 Gene3D G3DSA:3.40.50.300 194 507 2.1E-63 T 11-10-2018 SYN_03153 2e5fc9caf00964d4b8f8a16543dd37cf 509 SMART SM00382 213 396 4.5E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_03153 2e5fc9caf00964d4b8f8a16543dd37cf 509 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 502 1.0E-187 T 11-10-2018 IPR004482 Mg chelatase-related protein SYN_03153 2e5fc9caf00964d4b8f8a16543dd37cf 509 Gene3D G3DSA:3.30.230.10 32 169 2.9E-13 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SYN_03153 2e5fc9caf00964d4b8f8a16543dd37cf 509 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 406 502 6.1E-31 T 11-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain SYN_03153 2e5fc9caf00964d4b8f8a16543dd37cf 509 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 321 334 1.5E-6 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 SYN_03153 2e5fc9caf00964d4b8f8a16543dd37cf 509 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 293 307 1.5E-6 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 SYN_03153 2e5fc9caf00964d4b8f8a16543dd37cf 509 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 345 357 1.5E-6 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 SYN_03153 2e5fc9caf00964d4b8f8a16543dd37cf 509 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 212 227 1.5E-6 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 SYN_03153 2e5fc9caf00964d4b8f8a16543dd37cf 509 Pfam PF01078 Magnesium chelatase, subunit ChlI 193 398 3.1E-97 T 11-10-2018 IPR000523 Magnesium chelatase ChlI domain SYN_03153 2e5fc9caf00964d4b8f8a16543dd37cf 509 SUPERFAMILY SSF52540 193 505 2.43E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_03153 2e5fc9caf00964d4b8f8a16543dd37cf 509 SUPERFAMILY SSF54211 7 169 1.29E-34 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SYN_03153 2e5fc9caf00964d4b8f8a16543dd37cf 509 Pfam PF13541 Subunit ChlI of Mg-chelatase 20 142 6.1E-46 T 11-10-2018 SYN_01144 1948c0d4e40979bd80457a949dfa0212 444 Gene3D G3DSA:3.40.50.2000 1 210 9.6E-17 T 11-10-2018 SYN_01144 1948c0d4e40979bd80457a949dfa0212 444 Pfam PF13579 Glycosyl transferase 4-like domain 21 199 1.8E-18 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 SYN_01144 1948c0d4e40979bd80457a949dfa0212 444 Pfam PF00534 Glycosyl transferases group 1 217 383 7.3E-19 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 SYN_01144 1948c0d4e40979bd80457a949dfa0212 444 Gene3D G3DSA:3.40.50.2000 211 388 1.5E-25 T 11-10-2018 SYN_01144 1948c0d4e40979bd80457a949dfa0212 444 SUPERFAMILY SSF53756 2 403 1.83E-50 T 11-10-2018 SYN_02440 1599bfcf19545d886df30d3d18a1192f 528 SMART SM00851 23 138 3.1E-56 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain SYN_02440 1599bfcf19545d886df30d3d18a1192f 528 Pfam PF02142 MGS-like domain 23 138 4.1E-27 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain SYN_02440 1599bfcf19545d886df30d3d18a1192f 528 SMART SM00798 143 463 1.5E-191 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SYN_02440 1599bfcf19545d886df30d3d18a1192f 528 PIRSF PIRSF000414 6 528 6.6E-215 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SYN_02440 1599bfcf19545d886df30d3d18a1192f 528 Gene3D G3DSA:3.40.50.1380 5 205 4.9E-85 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily SYN_02440 1599bfcf19545d886df30d3d18a1192f 528 SUPERFAMILY SSF52335 11 203 2.75E-68 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily SYN_02440 1599bfcf19545d886df30d3d18a1192f 528 SUPERFAMILY SSF53927 222 528 5.01E-126 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 SYN_02440 1599bfcf19545d886df30d3d18a1192f 528 Gene3D G3DSA:3.40.140.20 394 528 1.9E-55 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SYN_02440 1599bfcf19545d886df30d3d18a1192f 528 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 12 528 1.1E-216 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SYN_02440 1599bfcf19545d886df30d3d18a1192f 528 Gene3D G3DSA:3.40.140.20 218 376 2.4E-61 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SYN_02440 1599bfcf19545d886df30d3d18a1192f 528 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 11 528 44.101 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SYN_02440 1599bfcf19545d886df30d3d18a1192f 528 Pfam PF01808 AICARFT/IMPCHase bienzyme 143 462 4.2E-121 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 SYN_02658 d917d2c7625e36a4e0ca775e042fb6dd 325 SUPERFAMILY SSF53448 27 245 1.21E-36 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_02658 d917d2c7625e36a4e0ca775e042fb6dd 325 Pfam PF00535 Glycosyl transferase family 2 30 144 1.0E-24 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 SYN_02658 d917d2c7625e36a4e0ca775e042fb6dd 325 Gene3D G3DSA:3.90.550.10 4 258 1.0E-37 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_01425 670c12e3899b3775bc91f493771de116 665 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 158 5.3E-24 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain SYN_01425 670c12e3899b3775bc91f493771de116 665 Gene3D G3DSA:2.170.130.10 27 170 7.3E-36 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily SYN_01425 670c12e3899b3775bc91f493771de116 665 SUPERFAMILY SSF56935 28 665 2.44E-117 T 11-10-2018 SYN_01425 670c12e3899b3775bc91f493771de116 665 Gene3D G3DSA:2.40.170.20 185 665 1.8E-73 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily SYN_01425 670c12e3899b3775bc91f493771de116 665 Pfam PF00593 TonB dependent receptor 238 664 1.2E-46 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel SYN_00041 c681bd1721e35800eb4d2c297a14d980 273 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 39 112 4.9E-25 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core SYN_00041 c681bd1721e35800eb4d2c297a14d980 273 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 177 238 2.3E-8 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core SYN_00041 c681bd1721e35800eb4d2c297a14d980 273 SUPERFAMILY SSF101386 19 115 9.81E-20 T 11-10-2018 SYN_00041 c681bd1721e35800eb4d2c297a14d980 273 Gene3D G3DSA:1.10.287.1080 142 271 3.2E-45 T 11-10-2018 SYN_00041 c681bd1721e35800eb4d2c297a14d980 273 Gene3D G3DSA:1.10.287.1080 13 137 9.3E-40 T 11-10-2018 SYN_00041 c681bd1721e35800eb4d2c297a14d980 273 SUPERFAMILY SSF101386 148 248 4.49E-24 T 11-10-2018 SYN_00041 c681bd1721e35800eb4d2c297a14d980 273 TIGRFAM TIGR00444 mazG: MazG family protein 23 268 7.2E-89 T 11-10-2018 IPR011551 NTP pyrophosphohydrolase MazG SYN_00253 5051591d9b7ba7d73f9d884f209550f5 425 Gene3D G3DSA:3.30.300.10 49 174 8.3E-148 T 11-10-2018 SYN_00253 5051591d9b7ba7d73f9d884f209550f5 425 Pfam PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) 26 421 1.0E-162 T 11-10-2018 IPR027790 S-adenosylmethionine synthase KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912 SYN_00253 5051591d9b7ba7d73f9d884f209550f5 425 Gene3D G3DSA:3.30.300.280 35 416 8.3E-148 T 11-10-2018 SYN_00253 5051591d9b7ba7d73f9d884f209550f5 425 Gene3D G3DSA:3.30.300.340 37 306 8.3E-148 T 11-10-2018 SYN_00253 5051591d9b7ba7d73f9d884f209550f5 425 ProDom PD011777 SYNTHETASE TRANSFERASE METHIONINE ADENOSYLTRANSFERASE S-ADENOSYLMETHIONINE NUCLEOTIDE-BINDING METABOLISM ATP-BINDING MAGNESIUM ONE-CARBON 27 424 7.0E-164 T 11-10-2018 SYN_01552 6d7085a0ec55e96ebc654e93d0043ddf 164 SUPERFAMILY SSF54523 7 92 7.61E-10 T 11-10-2018 SYN_01552 6d7085a0ec55e96ebc654e93d0043ddf 164 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 2.0E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site SYN_01552 6d7085a0ec55e96ebc654e93d0043ddf 164 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 1.7E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site SYN_01552 6d7085a0ec55e96ebc654e93d0043ddf 164 Gene3D G3DSA:3.30.700.10 6 131 1.8E-5 T 11-10-2018 SYN_02043 2d6addf1e7332419c97af48470ee822b 258 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 218 253 6.2E-12 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 SYN_02043 2d6addf1e7332419c97af48470ee822b 258 SUPERFAMILY SSF57783 216 255 1.05E-8 T 11-10-2018 SYN_02043 2d6addf1e7332419c97af48470ee822b 258 Gene3D G3DSA:3.30.65.10 207 257 4.3E-7 T 11-10-2018 SYN_02043 2d6addf1e7332419c97af48470ee822b 258 Pfam PF08378 Nuclease-related domain 33 145 9.0E-30 T 11-10-2018 IPR011528 Nuclease-related domain, NERD SYN_00205 77b5b7bac60ca778783c63d3a0efc9aa 206 Pfam PF01865 Protein of unknown function DUF47 5 203 2.4E-25 T 11-10-2018 IPR018445 Putative phosphate transport regulator SYN_00205 77b5b7bac60ca778783c63d3a0efc9aa 206 Gene3D G3DSA:1.20.58.220 10 206 3.9E-65 T 11-10-2018 IPR038078 PhoU-like domain superfamily SYN_00424 11a7bd8f7e857ed8cc9c3b1e4a230f94 544 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 5 521 7.2E-176 T 11-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 SYN_00424 11a7bd8f7e857ed8cc9c3b1e4a230f94 544 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 7.4E-9 T 11-10-2018 SYN_00424 11a7bd8f7e857ed8cc9c3b1e4a230f94 544 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 7.4E-9 T 11-10-2018 SYN_00424 11a7bd8f7e857ed8cc9c3b1e4a230f94 544 Gene3D G3DSA:3.50.50.60 6 402 6.6E-155 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_00424 11a7bd8f7e857ed8cc9c3b1e4a230f94 544 Gene3D G3DSA:3.90.700.10 248 358 6.6E-155 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 SYN_00424 11a7bd8f7e857ed8cc9c3b1e4a230f94 544 Pfam PF02910 Fumarate reductase flavoprotein C-term 443 534 5.1E-17 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SYN_00424 11a7bd8f7e857ed8cc9c3b1e4a230f94 544 PIRSF PIRSF000171 1 539 3.6E-36 T 11-10-2018 SYN_00424 11a7bd8f7e857ed8cc9c3b1e4a230f94 544 Gene3D G3DSA:1.20.58.100 427 540 1.3E-36 T 11-10-2018 SYN_00424 11a7bd8f7e857ed8cc9c3b1e4a230f94 544 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 370 377 6.6E-6 T 11-10-2018 SYN_00424 11a7bd8f7e857ed8cc9c3b1e4a230f94 544 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 6.6E-6 T 11-10-2018 SYN_00424 11a7bd8f7e857ed8cc9c3b1e4a230f94 544 SUPERFAMILY SSF46977 430 532 5.36E-31 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 SYN_00424 11a7bd8f7e857ed8cc9c3b1e4a230f94 544 Pfam PF00890 FAD binding domain 6 392 4.6E-91 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 SYN_00424 11a7bd8f7e857ed8cc9c3b1e4a230f94 544 SUPERFAMILY SSF51905 2 447 1.11E-63 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_00424 11a7bd8f7e857ed8cc9c3b1e4a230f94 544 SUPERFAMILY SSF56425 238 352 2.09E-41 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 SYN_00804 b5e87c968fbe8f73c8a96cc04884fdf0 651 SUPERFAMILY SSF53901 345 452 2.3E-10 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 SYN_00804 b5e87c968fbe8f73c8a96cc04884fdf0 651 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 414 484 6.9E-5 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 SYN_00804 b5e87c968fbe8f73c8a96cc04884fdf0 651 Gene3D G3DSA:3.40.47.10 329 578 1.5E-7 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 SYN_02420 9c9252616e43631dc96865cb68195d17 190 Pfam PF13247 4Fe-4S dicluster domain 70 138 4.1E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_02420 9c9252616e43631dc96865cb68195d17 190 Gene3D G3DSA:3.30.70.20 13 182 1.3E-10 T 11-10-2018 SYN_02420 9c9252616e43631dc96865cb68195d17 190 SUPERFAMILY SSF54862 16 152 2.3E-20 T 11-10-2018 SYN_02763 b132663dd5e6324be24a349b2ee046d4 355 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 32 354 2.3E-100 T 11-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 SYN_02763 b132663dd5e6324be24a349b2ee046d4 355 Gene3D G3DSA:3.30.460.20 3 164 2.1E-47 T 11-10-2018 SYN_02763 b132663dd5e6324be24a349b2ee046d4 355 Gene3D G3DSA:1.20.58.340 165 277 2.3E-38 T 11-10-2018 SYN_02763 b132663dd5e6324be24a349b2ee046d4 355 SUPERFAMILY SSF143865 11 289 9.68E-83 T 11-10-2018 SYN_02763 b132663dd5e6324be24a349b2ee046d4 355 Pfam PF01544 CorA-like Mg2+ transporter protein 61 351 1.2E-78 T 11-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 SYN_02763 b132663dd5e6324be24a349b2ee046d4 355 Gene3D G3DSA:1.20.58.340 278 355 3.6E-36 T 11-10-2018 SYN_02763 b132663dd5e6324be24a349b2ee046d4 355 SUPERFAMILY SSF144083 290 353 9.15E-24 T 11-10-2018 SYN_03431 41059ca31f97ce0bbdf46f65edf9a82c 107 Gene3D G3DSA:3.30.70.100 1 88 1.6E-13 T 11-10-2018 SYN_03431 41059ca31f97ce0bbdf46f65edf9a82c 107 Pfam PF03992 Antibiotic biosynthesis monooxygenase 4 67 1.3E-9 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain SYN_03431 41059ca31f97ce0bbdf46f65edf9a82c 107 SUPERFAMILY SSF54909 3 67 7.02E-13 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel SYN_00947 683877af96c89841bec79950714840a9 197 Gene3D G3DSA:2.60.450.10 45 187 1.6E-26 T 11-10-2018 SYN_00947 683877af96c89841bec79950714840a9 197 Pfam PF03968 OstA-like protein 53 171 2.5E-18 T 11-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal SYN_02970 e6bdfe69d25928063e662cd6e31b499f 202 Pfam PF02677 Uncharacterized BCR, COG1636 3 170 1.5E-57 T 11-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 SYN_02970 e6bdfe69d25928063e662cd6e31b499f 202 Hamap MF_02089 Epoxyqueuosine reductase QueH [queH]. 3 172 32.889 T 11-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 SYN_01555 1aa11143f2c7e6cc85e295b983137722 509 Gene3D G3DSA:3.30.1490.300 72 127 1.9E-33 T 11-10-2018 SYN_01555 1aa11143f2c7e6cc85e295b983137722 509 Pfam PF11104 Type IV pilus assembly protein PilM; 7 324 5.9E-16 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM SYN_01555 1aa11143f2c7e6cc85e295b983137722 509 Gene3D G3DSA:3.30.420.40 165 290 1.9E-33 T 11-10-2018 SYN_01555 1aa11143f2c7e6cc85e295b983137722 509 SUPERFAMILY SSF53067 42 146 3.63E-10 T 11-10-2018 SYN_01555 1aa11143f2c7e6cc85e295b983137722 509 Gene3D G3DSA:3.30.420.40 6 323 1.9E-33 T 11-10-2018 SYN_01555 1aa11143f2c7e6cc85e295b983137722 509 SUPERFAMILY SSF53067 4 292 2.84E-9 T 11-10-2018 SYN_01555 1aa11143f2c7e6cc85e295b983137722 509 Pfam PF12693 GspL periplasmic domain 354 471 3.1E-7 T 11-10-2018 IPR025691 GspL periplasmic domain SYN_02073 b22d0020b00044ed432af5bcac89a608 478 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 14 470 3.1E-112 T 11-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 SYN_02073 b22d0020b00044ed432af5bcac89a608 478 Gene3D G3DSA:2.20.200.10 108 359 2.6E-130 T 11-10-2018 SYN_02073 b22d0020b00044ed432af5bcac89a608 478 Pfam PF02321 Outer membrane efflux protein 71 261 1.8E-24 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SYN_02073 b22d0020b00044ed432af5bcac89a608 478 Pfam PF02321 Outer membrane efflux protein 289 468 4.9E-27 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SYN_02073 b22d0020b00044ed432af5bcac89a608 478 Gene3D G3DSA:1.20.1600.10 62 470 2.6E-130 T 11-10-2018 SYN_02073 b22d0020b00044ed432af5bcac89a608 478 SUPERFAMILY SSF56954 6 470 3.14E-107 T 11-10-2018 SYN_01008 f5e5da426c098e0f77488865b552af49 288 Pfam PF01963 TraB family 24 283 7.2E-70 T 11-10-2018 IPR002816 Pheromone shutdown, TraB SYN_02578 efaf93630db15eaa43be9496bbb9f3fe 308 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 33 48 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SYN_02578 efaf93630db15eaa43be9496bbb9f3fe 308 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 67 80 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SYN_02578 efaf93630db15eaa43be9496bbb9f3fe 308 Gene3D G3DSA:3.20.20.20 18 299 1.4E-67 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SYN_02578 efaf93630db15eaa43be9496bbb9f3fe 308 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 33 291 6.9E-82 T 11-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 SYN_02578 efaf93630db15eaa43be9496bbb9f3fe 308 SUPERFAMILY SSF51717 31 294 1.57E-66 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SYN_02578 efaf93630db15eaa43be9496bbb9f3fe 308 Pfam PF00809 Pterin binding enzyme 34 277 3.6E-69 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SYN_00187 373d806cb07aa8014af4c5f62f8ebced 271 Gene3D G3DSA:3.30.1150.10 164 270 3.9E-24 T 11-10-2018 SYN_00187 373d806cb07aa8014af4c5f62f8ebced 271 SUPERFAMILY SSF74653 84 265 6.28E-19 T 11-10-2018 SYN_00187 373d806cb07aa8014af4c5f62f8ebced 271 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 206 265 6.5E-12 T 11-10-2018 IPR006260 TonB/TolA, C-terminal SYN_00187 373d806cb07aa8014af4c5f62f8ebced 271 Pfam PF13103 TonB C terminal 180 265 7.9E-20 T 11-10-2018 SYN_00837 67fbf315748466f83d23c7179f40d649 294 Gene3D G3DSA:3.40.190.10 44 269 1.2E-94 T 11-10-2018 SYN_00837 67fbf315748466f83d23c7179f40d649 294 SUPERFAMILY SSF53850 42 273 6.72E-32 T 11-10-2018 SYN_00837 67fbf315748466f83d23c7179f40d649 294 Pfam PF12849 PBP superfamily domain 32 261 6.3E-34 T 11-10-2018 IPR024370 PBP domain SYN_00837 67fbf315748466f83d23c7179f40d649 294 Gene3D G3DSA:3.40.190.10 119 232 1.2E-94 T 11-10-2018 SYN_01902 d27f631e38ff9809fb6dff703d4eb3d9 804 Pfam PF00534 Glycosyl transferases group 1 195 364 3.9E-17 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 SYN_01902 d27f631e38ff9809fb6dff703d4eb3d9 804 SUPERFAMILY SSF48208 554 733 4.56E-7 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 SYN_01902 d27f631e38ff9809fb6dff703d4eb3d9 804 Gene3D G3DSA:3.40.50.2000 178 367 3.8E-40 T 11-10-2018 SYN_01902 d27f631e38ff9809fb6dff703d4eb3d9 804 SUPERFAMILY SSF53756 13 386 1.44E-48 T 11-10-2018 SYN_01902 d27f631e38ff9809fb6dff703d4eb3d9 804 Gene3D G3DSA:3.40.50.2000 111 383 3.8E-40 T 11-10-2018 SYN_01902 d27f631e38ff9809fb6dff703d4eb3d9 804 Pfam PF13439 Glycosyltransferase Family 4 80 178 1.0E-10 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 SYN_01938 4e9c881230c694f8624bbb89c5923f48 372 Pfam PF01817 Chorismate mutase type II 10 86 3.0E-16 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 SYN_01938 4e9c881230c694f8624bbb89c5923f48 372 Gene3D G3DSA:3.20.20.70 97 342 9.5E-62 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_01938 4e9c881230c694f8624bbb89c5923f48 372 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 106 339 29.286 T 11-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 SYN_01938 4e9c881230c694f8624bbb89c5923f48 372 SMART SM00830 10 89 1.7E-22 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 SYN_01938 4e9c881230c694f8624bbb89c5923f48 372 SUPERFAMILY SSF48600 5 90 1.31E-18 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 SYN_01938 4e9c881230c694f8624bbb89c5923f48 372 Pfam PF01487 Type I 3-dehydroquinase 108 336 2.8E-59 T 11-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 SYN_01938 4e9c881230c694f8624bbb89c5923f48 372 SUPERFAMILY SSF51569 101 340 4.4E-51 T 11-10-2018 SYN_01938 4e9c881230c694f8624bbb89c5923f48 372 Gene3D G3DSA:1.20.59.10 3 89 1.0E-21 T 11-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 SYN_01145 dfa4b951502dd0f86ac40344a8e9fe66 532 SUPERFAMILY SSF56801 4 529 2.22E-146 T 11-10-2018 SYN_01145 dfa4b951502dd0f86ac40344a8e9fe66 532 ProSitePatterns PS00455 Putative AMP-binding domain signature. 174 185 - T 11-10-2018 IPR020845 AMP-binding, conserved site SYN_01145 dfa4b951502dd0f86ac40344a8e9fe66 532 Pfam PF00501 AMP-binding enzyme 17 436 1.1E-99 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 SYN_01145 dfa4b951502dd0f86ac40344a8e9fe66 532 Gene3D G3DSA:3.40.50.12780 2 428 1.0E-108 T 11-10-2018 SYN_01145 dfa4b951502dd0f86ac40344a8e9fe66 532 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 31 460 5.3E-111 T 11-10-2018 IPR010071 Amino acid adenylation domain SYN_01145 dfa4b951502dd0f86ac40344a8e9fe66 532 Gene3D G3DSA:3.30.300.30 430 531 4.1E-30 T 11-10-2018 SYN_01145 dfa4b951502dd0f86ac40344a8e9fe66 532 Pfam PF13193 AMP-binding enzyme C-terminal domain 444 519 5.1E-15 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain SYN_02641 26a605008d8b7124fdd8c195a2e58bb1 402 Gene3D G3DSA:3.40.720.10 18 387 1.4E-92 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 SYN_02641 26a605008d8b7124fdd8c195a2e58bb1 402 Pfam PF01676 Metalloenzyme superfamily 16 389 1.0E-32 T 11-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 SYN_02641 26a605008d8b7124fdd8c195a2e58bb1 402 TIGRFAM TIGR00306 apgM: phosphoglycerate mutase (2,3-diphosphoglycerate-independent), archaeal form 18 391 8.1E-81 T 11-10-2018 IPR004456 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GO:0003824|GO:0046537 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SYN_02641 26a605008d8b7124fdd8c195a2e58bb1 402 PIRSF PIRSF006392 12 398 1.5E-110 T 11-10-2018 IPR004456 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GO:0003824|GO:0046537 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SYN_02641 26a605008d8b7124fdd8c195a2e58bb1 402 Gene3D G3DSA:3.30.70.2130 91 232 1.4E-92 T 11-10-2018 SYN_02641 26a605008d8b7124fdd8c195a2e58bb1 402 SUPERFAMILY SSF53649 16 368 2.24E-29 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 SYN_02641 26a605008d8b7124fdd8c195a2e58bb1 402 Pfam PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 50 219 3.3E-41 T 11-10-2018 IPR004456 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GO:0003824|GO:0046537 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SYN_01111 da4586b225cf3f637dc9c39954938480 478 PIRSF PIRSF016636 2 478 8.3E-146 T 11-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB SYN_01111 da4586b225cf3f637dc9c39954938480 478 PIRSF PIRSF500217 2 478 3.4E-148 T 11-10-2018 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 SYN_01111 da4586b225cf3f637dc9c39954938480 478 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 151 347 1.0E-24 T 11-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT SYN_01073 7ea4e730442605c5bb82846edd5c5fde 176 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 6 176 5.8E-53 T 11-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 SYN_01073 7ea4e730442605c5bb82846edd5c5fde 176 PIRSF PIRSF015617 1 176 2.2E-51 T 11-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 SYN_01073 7ea4e730442605c5bb82846edd5c5fde 176 Gene3D G3DSA:3.40.50.300 1 176 4.7E-54 T 11-10-2018 SYN_01073 7ea4e730442605c5bb82846edd5c5fde 176 SUPERFAMILY SSF52540 3 176 1.28E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02428 a5ed858d087c5b4685fbe77991e78bb4 231 SUPERFAMILY SSF47240 82 207 7.27E-12 T 11-10-2018 IPR009078 Ferritin-like superfamily SYN_02428 a5ed858d087c5b4685fbe77991e78bb4 231 Gene3D G3DSA:1.20.1260.10 81 210 1.1E-8 T 11-10-2018 IPR012347 Ferritin-like SYN_00155 5a34d4c4fd4be6bdaa621bb202840fac 391 SUPERFAMILY SSF52922 252 373 7.07E-37 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 SYN_00155 5a34d4c4fd4be6bdaa621bb202840fac 391 Gene3D G3DSA:3.40.50.970 3 251 4.9E-95 T 11-10-2018 SYN_00155 5a34d4c4fd4be6bdaa621bb202840fac 391 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 16 236 1.3E-67 T 11-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 SYN_00155 5a34d4c4fd4be6bdaa621bb202840fac 391 Gene3D G3DSA:3.40.50.920 252 390 1.5E-42 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 SYN_00155 5a34d4c4fd4be6bdaa621bb202840fac 391 SUPERFAMILY SSF52518 10 250 7.37E-67 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold SYN_00155 5a34d4c4fd4be6bdaa621bb202840fac 391 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 261 364 8.2E-28 T 11-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II SYN_00327 7edcd5ba4b2c2c258fdce238f8f6bd30 170 PIRSF PIRSF037663 12 154 4.8E-11 T 11-10-2018 IPR017255 Acetyltransferase, GNAT, predicted SYN_00327 7edcd5ba4b2c2c258fdce238f8f6bd30 170 Gene3D G3DSA:3.40.630.30 5 157 3.1E-30 T 11-10-2018 SYN_00327 7edcd5ba4b2c2c258fdce238f8f6bd30 170 SUPERFAMILY SSF55729 12 151 2.92E-27 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase SYN_00327 7edcd5ba4b2c2c258fdce238f8f6bd30 170 Pfam PF00583 Acetyltransferase (GNAT) family 26 145 1.5E-15 T 11-10-2018 IPR000182 GNAT domain SYN_02733 284038695488cf7793e24a547b491684 82 SUPERFAMILY SSF47413 11 80 2.25E-13 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 SYN_02733 284038695488cf7793e24a547b491684 82 Gene3D G3DSA:1.10.260.40 5 81 1.8E-17 T 11-10-2018 SYN_02733 284038695488cf7793e24a547b491684 82 Pfam PF13560 Helix-turn-helix domain 17 72 3.0E-8 T 11-10-2018 SYN_02733 284038695488cf7793e24a547b491684 82 SMART SM00530 20 75 4.9E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SYN_02018 be22b76dbe15326d5f44a7f18d5165db 101 TIGRFAM TIGR00106 TIGR00106: uncharacterized protein, MTH1187 family 1 95 4.3E-25 T 11-10-2018 IPR002767 Thiamine-binding protein SYN_02018 be22b76dbe15326d5f44a7f18d5165db 101 SUPERFAMILY SSF89957 1 95 4.84E-30 T 11-10-2018 IPR029756 MTH1187/YkoF-like SYN_02018 be22b76dbe15326d5f44a7f18d5165db 101 Pfam PF01910 Thiamine-binding protein 3 92 4.1E-32 T 11-10-2018 IPR002767 Thiamine-binding protein SYN_02018 be22b76dbe15326d5f44a7f18d5165db 101 Gene3D G3DSA:3.30.70.930 1 96 2.6E-32 T 11-10-2018 IPR029756 MTH1187/YkoF-like SYN_00010 8a90ad8d52b4714ee742b520a3f6c3c7 397 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 33 346 2.1E-27 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 SYN_00010 8a90ad8d52b4714ee742b520a3f6c3c7 397 SUPERFAMILY SSF52540 9 373 3.92E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00010 8a90ad8d52b4714ee742b520a3f6c3c7 397 PIRSF PIRSF029347 9 375 5.7E-35 T 11-10-2018 IPR014555 RecF-like SYN_00010 8a90ad8d52b4714ee742b520a3f6c3c7 397 Gene3D G3DSA:3.40.50.300 9 380 1.6E-27 T 11-10-2018 SYN_01757 29c42a7582c66f46f3fce3ca319745b8 375 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site SYN_01757 29c42a7582c66f46f3fce3ca319745b8 375 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 33 7.1E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site SYN_01757 29c42a7582c66f46f3fce3ca319745b8 375 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 34 2.1E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site SYN_01757 29c42a7582c66f46f3fce3ca319745b8 375 Gene3D G3DSA:2.60.40.10 280 375 2.3E-6 T 11-10-2018 IPR013783 Immunoglobulin-like fold SYN_01895 5b579c93c5a12a8d787397d3f1c602d6 581 Pfam PF12224 Putative amidoligase enzyme 196 395 2.1E-37 T 11-10-2018 IPR022025 Putative amidoligase enzyme SYN_00554 960d7c141a3b65acd3b5648bb8cb58b3 345 Gene3D G3DSA:3.30.420.40 14 330 2.1E-127 T 11-10-2018 SYN_00554 960d7c141a3b65acd3b5648bb8cb58b3 345 Gene3D G3DSA:3.90.640.10 189 262 2.1E-127 T 11-10-2018 SYN_00554 960d7c141a3b65acd3b5648bb8cb58b3 345 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 10 339 2.0E-155 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SYN_00554 960d7c141a3b65acd3b5648bb8cb58b3 345 Pfam PF06723 MreB/Mbl protein 11 339 1.4E-145 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SYN_00554 960d7c141a3b65acd3b5648bb8cb58b3 345 Gene3D G3DSA:3.30.420.40 157 320 2.1E-127 T 11-10-2018 SYN_00554 960d7c141a3b65acd3b5648bb8cb58b3 345 SUPERFAMILY SSF53067 152 337 3.44E-46 T 11-10-2018 SYN_00554 960d7c141a3b65acd3b5648bb8cb58b3 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 135 154 4.1E-63 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SYN_00554 960d7c141a3b65acd3b5648bb8cb58b3 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 4.1E-63 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SYN_00554 960d7c141a3b65acd3b5648bb8cb58b3 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 4.1E-63 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SYN_00554 960d7c141a3b65acd3b5648bb8cb58b3 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 190 210 4.1E-63 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SYN_00554 960d7c141a3b65acd3b5648bb8cb58b3 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 303 329 4.1E-63 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 SYN_00554 960d7c141a3b65acd3b5648bb8cb58b3 345 SUPERFAMILY SSF53067 10 151 3.3E-40 T 11-10-2018 SYN_00317 b1ac6211b5bd62bed58ebcaf47a094b8 148 Gene3D G3DSA:3.30.1330.80 2 147 2.1E-23 T 11-10-2018 SYN_00317 b1ac6211b5bd62bed58ebcaf47a094b8 148 Pfam PF03479 Domain of unknown function (DUF296) 10 127 6.4E-15 T 11-10-2018 IPR005175 PPC domain SYN_00317 b1ac6211b5bd62bed58ebcaf47a094b8 148 SUPERFAMILY SSF117856 1 145 1.83E-30 T 11-10-2018 SYN_02739 9ad145ed1cf3aaa60d3188d40a5775c1 307 Gene3D G3DSA:1.10.4080.10 5 307 1.2E-103 T 11-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily SYN_02739 9ad145ed1cf3aaa60d3188d40a5775c1 307 SUPERFAMILY SSF101478 6 306 5.89E-78 T 11-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily SYN_02739 9ad145ed1cf3aaa60d3188d40a5775c1 307 Pfam PF03747 ADP-ribosylglycohydrolase 13 285 1.2E-76 T 11-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 SYN_02829 a2595ace0371645974272a9d1caa41bf 390 SMART SM00962 195 386 2.0E-55 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SYN_02829 a2595ace0371645974272a9d1caa41bf 390 Gene3D G3DSA:1.20.120.1380 141 377 2.7E-64 T 11-10-2018 SYN_02829 a2595ace0371645974272a9d1caa41bf 390 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 282 1.1E-68 T 11-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 SYN_02829 a2595ace0371645974272a9d1caa41bf 390 Gene3D G3DSA:3.40.50.300 192 374 2.7E-64 T 11-10-2018 SYN_02829 a2595ace0371645974272a9d1caa41bf 390 Pfam PF00448 SRP54-type protein, GTPase domain 197 385 2.7E-38 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 SYN_02829 a2595ace0371645974272a9d1caa41bf 390 SUPERFAMILY SSF52540 193 385 2.86E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02829 a2595ace0371645974272a9d1caa41bf 390 SMART SM00382 194 340 2.9E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_02154 337c1d0020f300b46de96e8ff9151ebf 296 SUPERFAMILY SSF53633 3 294 6.41E-94 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily SYN_02154 337c1d0020f300b46de96e8ff9151ebf 296 Hamap MF_00082 Acetylglutamate kinase [argB]. 26 289 49.173 T 11-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 SYN_02154 337c1d0020f300b46de96e8ff9151ebf 296 Gene3D G3DSA:3.40.1160.10 3 295 1.2E-96 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily SYN_02154 337c1d0020f300b46de96e8ff9151ebf 296 PRINTS PR00474 Glutamate 5-kinase family signature 58 72 3.3E-9 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 SYN_02154 337c1d0020f300b46de96e8ff9151ebf 296 PRINTS PR00474 Glutamate 5-kinase family signature 196 223 3.3E-9 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 SYN_02154 337c1d0020f300b46de96e8ff9151ebf 296 PRINTS PR00474 Glutamate 5-kinase family signature 246 266 3.3E-9 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 SYN_02154 337c1d0020f300b46de96e8ff9151ebf 296 Pfam PF00696 Amino acid kinase family 28 273 7.2E-47 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 SYN_02154 337c1d0020f300b46de96e8ff9151ebf 296 TIGRFAM TIGR00761 argB: acetylglutamate kinase 28 271 8.1E-78 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 SYN_02154 337c1d0020f300b46de96e8ff9151ebf 296 PIRSF PIRSF000728 10 295 8.0E-111 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 SYN_02761 ed58ae498f16570adc1404aed5146207 848 Pfam PF11897 Protein of unknown function (DUF3417) 23 125 3.9E-26 T 11-10-2018 IPR024517 Glycogen phosphorylase, domain of unknown function DUF3417 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 SYN_02761 ed58ae498f16570adc1404aed5146207 848 Gene3D G3DSA:3.40.50.2000 268 427 2.1E-21 T 11-10-2018 SYN_02761 ed58ae498f16570adc1404aed5146207 848 Pfam PF00343 Carbohydrate phosphorylase 275 625 4.8E-21 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 SYN_02761 ed58ae498f16570adc1404aed5146207 848 TIGRFAM TIGR02094 more_P_ylases: alpha-glucan phosphorylases 112 713 4.7E-234 T 11-10-2018 IPR011834 Alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 SYN_02761 ed58ae498f16570adc1404aed5146207 848 PIRSF PIRSF000460 17 793 6.5E-243 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 SYN_02761 ed58ae498f16570adc1404aed5146207 848 Gene3D G3DSA:3.40.50.2000 121 183 5.8E-10 T 11-10-2018 SYN_02761 ed58ae498f16570adc1404aed5146207 848 SUPERFAMILY SSF53756 19 729 5.23E-190 T 11-10-2018 SYN_02761 ed58ae498f16570adc1404aed5146207 848 Gene3D G3DSA:3.40.50.2000 428 665 5.9E-35 T 11-10-2018 SYN_02665 369cc2ce837da83ba03831b52b1ea03f 302 SUPERFAMILY SSF53448 6 211 3.38E-46 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_02665 369cc2ce837da83ba03831b52b1ea03f 302 Pfam PF00535 Glycosyl transferase family 2 10 135 1.8E-28 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 SYN_02665 369cc2ce837da83ba03831b52b1ea03f 302 Gene3D G3DSA:3.90.550.10 1 232 1.6E-47 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_00314 4d153aa65f5740d79b25576ea50f56ec 142 Gene3D G3DSA:3.40.50.620 1 142 6.8E-28 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_00314 4d153aa65f5740d79b25576ea50f56ec 142 PRINTS PR01438 Universal stress protein signature 101 113 6.0E-5 T 11-10-2018 IPR006015 Universal stress protein A SYN_00314 4d153aa65f5740d79b25576ea50f56ec 142 PRINTS PR01438 Universal stress protein signature 5 23 6.0E-5 T 11-10-2018 IPR006015 Universal stress protein A SYN_00314 4d153aa65f5740d79b25576ea50f56ec 142 SUPERFAMILY SSF52402 4 142 3.1E-27 T 11-10-2018 SYN_00314 4d153aa65f5740d79b25576ea50f56ec 142 Pfam PF00582 Universal stress protein family 4 142 1.5E-20 T 11-10-2018 IPR006016 UspA SYN_00475 c64cb16bf05300f3500073e4e13abe19 296 SUPERFAMILY SSF52402 45 244 1.68E-35 T 11-10-2018 SYN_00475 c64cb16bf05300f3500073e4e13abe19 296 Pfam PF06508 Queuosine biosynthesis protein QueC 46 110 9.5E-5 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 SYN_00475 c64cb16bf05300f3500073e4e13abe19 296 TIGRFAM TIGR00268 TIGR00268: TIGR00268 family protein 34 284 2.5E-70 T 11-10-2018 IPR005232 Pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase LarE GO:0016783 SYN_00475 c64cb16bf05300f3500073e4e13abe19 296 Gene3D G3DSA:3.40.50.620 29 191 9.8E-23 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_00475 c64cb16bf05300f3500073e4e13abe19 296 PIRSF PIRSF006661 22 296 5.7E-92 T 11-10-2018 IPR005232 Pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase LarE GO:0016783 SYN_03707 8d18cbf079a52bda235cca2cc16ebe1b 145 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 28 48 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site SYN_03707 8d18cbf079a52bda235cca2cc16ebe1b 145 Pfam PF07963 Prokaryotic N-terminal methylation motif 25 49 1.0E-10 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site SYN_03707 8d18cbf079a52bda235cca2cc16ebe1b 145 SUPERFAMILY SSF54523 30 112 6.67E-7 T 11-10-2018 SYN_03707 8d18cbf079a52bda235cca2cc16ebe1b 145 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 27 49 6.8E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site SYN_02769 6c4089857b0df5ee16e329e8c98afe94 196 Pfam PF01195 Peptidyl-tRNA hydrolase 3 185 2.8E-55 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SYN_02769 6c4089857b0df5ee16e329e8c98afe94 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 SYN_02769 6c4089857b0df5ee16e329e8c98afe94 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 185 3.7E-58 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SYN_02769 6c4089857b0df5ee16e329e8c98afe94 196 Gene3D G3DSA:3.40.50.1470 1 194 3.7E-67 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 SYN_02769 6c4089857b0df5ee16e329e8c98afe94 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 178 34.281 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SYN_02769 6c4089857b0df5ee16e329e8c98afe94 196 SUPERFAMILY SSF53178 2 185 2.49E-63 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 SYN_01420 d0230156f5fa592cf1d3c3146cb4cfd6 509 Pfam PF14134 Domain of unknown function (DUF4301) 9 509 6.8E-205 T 11-10-2018 IPR025393 Domain of unknown function DUF4301 SYN_01420 d0230156f5fa592cf1d3c3146cb4cfd6 509 SUPERFAMILY SSF53448 75 507 1.25E-13 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_01461 fa9870c4e391b875f6f4674a0aa96b67 336 Gene3D G3DSA:2.40.50.100 197 244 7.4E-10 T 11-10-2018 SYN_01461 fa9870c4e391b875f6f4674a0aa96b67 336 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 54 74 1.7E-7 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SYN_01461 fa9870c4e391b875f6f4674a0aa96b67 336 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 325 336 1.7E-7 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 SYN_01461 fa9870c4e391b875f6f4674a0aa96b67 336 SUPERFAMILY SSF111369 165 335 1.01E-12 T 11-10-2018 SYN_01461 fa9870c4e391b875f6f4674a0aa96b67 336 Gene3D G3DSA:1.10.287.470 112 181 2.9E-9 T 11-10-2018 SYN_01461 fa9870c4e391b875f6f4674a0aa96b67 336 Gene3D G3DSA:2.40.50.100 43 75 5.7E-12 T 11-10-2018 SYN_01461 fa9870c4e391b875f6f4674a0aa96b67 336 Gene3D G3DSA:1.10.287.470 76 104 5.7E-12 T 11-10-2018 SYN_01461 fa9870c4e391b875f6f4674a0aa96b67 336 SUPERFAMILY SSF111369 38 123 2.75E-8 T 11-10-2018 SYN_01461 fa9870c4e391b875f6f4674a0aa96b67 336 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 184 331 8.2E-29 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 SYN_01461 fa9870c4e391b875f6f4674a0aa96b67 336 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 40 331 1.9E-28 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SYN_01461 fa9870c4e391b875f6f4674a0aa96b67 336 Pfam PF00529 HlyD membrane-fusion protein of T1SS 62 307 3.8E-7 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 SYN_01461 fa9870c4e391b875f6f4674a0aa96b67 336 Gene3D G3DSA:2.40.30.170 245 335 5.5E-22 T 11-10-2018 SYN_00664 a8001e1306cff64f551c7446066162eb 572 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 75 94 7.1E-6 T 11-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 SYN_00664 a8001e1306cff64f551c7446066162eb 572 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 439 458 7.1E-6 T 11-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 SYN_00664 a8001e1306cff64f551c7446066162eb 572 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 35 54 7.1E-6 T 11-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 SYN_00664 a8001e1306cff64f551c7446066162eb 572 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 101 120 7.1E-6 T 11-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 SYN_00664 a8001e1306cff64f551c7446066162eb 572 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 174 194 7.1E-6 T 11-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 SYN_00664 a8001e1306cff64f551c7446066162eb 572 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 396 411 7.1E-6 T 11-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 SYN_00664 a8001e1306cff64f551c7446066162eb 572 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 72 456 3.6E-35 T 11-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 SYN_00664 a8001e1306cff64f551c7446066162eb 572 SUPERFAMILY SSF53383 33 542 3.11E-86 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SYN_00664 a8001e1306cff64f551c7446066162eb 572 Gene3D G3DSA:3.90.1150.170 63 544 1.3E-80 T 11-10-2018 SYN_00664 a8001e1306cff64f551c7446066162eb 572 Gene3D G3DSA:3.40.640.10 129 402 1.3E-80 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SYN_02967 65afb3b217ba7e918bb62e654dfa3406 240 Pfam PF02591 C4-type zinc ribbon domain 198 230 7.0E-14 T 11-10-2018 IPR003743 C4-type zinc ribbon domain SYN_02693 c4924f0f91b11513c9f9cce0778e66fb 167 Pfam PF13508 Acetyltransferase (GNAT) domain 86 145 5.0E-9 T 11-10-2018 IPR000182 GNAT domain SYN_02693 c4924f0f91b11513c9f9cce0778e66fb 167 Gene3D G3DSA:3.40.630.30 1 160 1.0E-47 T 11-10-2018 SYN_02693 c4924f0f91b11513c9f9cce0778e66fb 167 SUPERFAMILY SSF55729 5 148 3.19E-16 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase SYN_00210 cfa9acc3486d4d5846d3481f37ef1892 181 Gene3D G3DSA:1.10.1760.20 2 180 1.1E-53 T 11-10-2018 SYN_00210 cfa9acc3486d4d5846d3481f37ef1892 181 Pfam PF02632 BioY family 36 176 2.9E-41 T 11-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 SYN_00210 cfa9acc3486d4d5846d3481f37ef1892 181 PIRSF PIRSF016661 2 181 2.8E-49 T 11-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 SYN_01696 4710b5249fe9abf6e660e8609258b083 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 8.1E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SYN_01696 4710b5249fe9abf6e660e8609258b083 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 8.1E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SYN_01696 4710b5249fe9abf6e660e8609258b083 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 8.1E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SYN_01696 4710b5249fe9abf6e660e8609258b083 246 Gene3D G3DSA:3.40.50.720 2 244 5.2E-70 T 11-10-2018 SYN_01696 4710b5249fe9abf6e660e8609258b083 246 SUPERFAMILY SSF51735 9 243 3.36E-68 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_01696 4710b5249fe9abf6e660e8609258b083 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 243 7.7E-53 T 11-10-2018 SYN_01696 4710b5249fe9abf6e660e8609258b083 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 5.1E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SYN_01696 4710b5249fe9abf6e660e8609258b083 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 5.1E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SYN_01696 4710b5249fe9abf6e660e8609258b083 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 5.1E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SYN_01696 4710b5249fe9abf6e660e8609258b083 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.1E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SYN_01696 4710b5249fe9abf6e660e8609258b083 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 5.1E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SYN_01696 4710b5249fe9abf6e660e8609258b083 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 5.1E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR SYN_01468 b7dc8053decb02cb099747df9c4b50b1 143 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 93 139 3.3E-11 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SYN_01468 b7dc8053decb02cb099747df9c4b50b1 143 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 5 143 7.0E-48 T 11-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 SYN_01468 b7dc8053decb02cb099747df9c4b50b1 143 Pfam PF00460 Flagella basal body rod protein 8 34 2.6E-8 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SYN_01468 b7dc8053decb02cb099747df9c4b50b1 143 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site SYN_02866 080e829e7bb5a2a3d1b3f1f64518b9f6 363 Gene3D G3DSA:3.40.50.720 6 322 1.0E-127 T 11-10-2018 SYN_02866 080e829e7bb5a2a3d1b3f1f64518b9f6 363 SUPERFAMILY SSF51735 6 346 9.12E-91 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_02866 080e829e7bb5a2a3d1b3f1f64518b9f6 363 Gene3D G3DSA:3.90.25.10 200 330 1.0E-127 T 11-10-2018 SYN_02866 080e829e7bb5a2a3d1b3f1f64518b9f6 363 Pfam PF16363 GDP-mannose 4,6 dehydratase 7 323 2.9E-98 T 11-10-2018 IPR016040 NAD(P)-binding domain SYN_02866 080e829e7bb5a2a3d1b3f1f64518b9f6 363 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 6 335 1.1E-144 T 11-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 SYN_03223 c9dacd2effa4ffb15e42b868ed1585fd 545 Gene3D G3DSA:1.10.560.10 8 520 5.4E-239 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily SYN_03223 c9dacd2effa4ffb15e42b868ed1585fd 545 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 6.4E-265 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 SYN_03223 c9dacd2effa4ffb15e42b868ed1585fd 545 Gene3D G3DSA:3.50.7.10 192 372 5.4E-239 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily SYN_03223 c9dacd2effa4ffb15e42b868ed1585fd 545 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 2.6E-106 T 11-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 SYN_03223 c9dacd2effa4ffb15e42b868ed1585fd 545 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 11-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 SYN_03223 c9dacd2effa4ffb15e42b868ed1585fd 545 SUPERFAMILY SSF54849 137 205 2.2E-25 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily SYN_03223 c9dacd2effa4ffb15e42b868ed1585fd 545 Hamap MF_00600 60 kDa chaperonin [groL]. 2 543 42.512 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 SYN_03223 c9dacd2effa4ffb15e42b868ed1585fd 545 Gene3D G3DSA:3.30.260.10 136 410 5.4E-239 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily SYN_03223 c9dacd2effa4ffb15e42b868ed1585fd 545 SUPERFAMILY SSF48592 7 520 3.41E-79 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily SYN_03223 c9dacd2effa4ffb15e42b868ed1585fd 545 SUPERFAMILY SSF52029 184 376 1.64E-85 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily SYN_03223 c9dacd2effa4ffb15e42b868ed1585fd 545 PRINTS PR00298 60kDa chaperonin signature 398 419 8.2E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 SYN_03223 c9dacd2effa4ffb15e42b868ed1585fd 545 PRINTS PR00298 60kDa chaperonin signature 27 53 8.2E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 SYN_03223 c9dacd2effa4ffb15e42b868ed1585fd 545 PRINTS PR00298 60kDa chaperonin signature 83 110 8.2E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 SYN_03223 c9dacd2effa4ffb15e42b868ed1585fd 545 PRINTS PR00298 60kDa chaperonin signature 268 291 8.2E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 SYN_03223 c9dacd2effa4ffb15e42b868ed1585fd 545 PRINTS PR00298 60kDa chaperonin signature 350 375 8.2E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 SYN_03034 d27532600df26e34a3fa07e3e2313af9 275 Pfam PF01545 Cation efflux family 100 271 2.1E-13 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SYN_03034 d27532600df26e34a3fa07e3e2313af9 275 Gene3D G3DSA:1.20.1510.10 95 274 1.9E-10 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily SYN_03034 d27532600df26e34a3fa07e3e2313af9 275 SUPERFAMILY SSF55008 11 76 1.96E-10 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 SYN_03034 d27532600df26e34a3fa07e3e2313af9 275 SUPERFAMILY SSF161111 92 271 1.44E-28 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily SYN_03034 d27532600df26e34a3fa07e3e2313af9 275 Gene3D G3DSA:3.30.70.100 2 82 3.0E-6 T 11-10-2018 SYN_01398 21e0f856e28275ed686827376401259b 523 Gene3D G3DSA:3.90.226.10 8 264 3.2E-86 T 11-10-2018 SYN_01398 21e0f856e28275ed686827376401259b 523 SUPERFAMILY SSF52096 232 523 5.64E-81 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily SYN_01398 21e0f856e28275ed686827376401259b 523 Pfam PF01039 Carboxyl transferase domain 35 521 3.6E-181 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 SYN_01398 21e0f856e28275ed686827376401259b 523 Gene3D G3DSA:3.90.226.10 266 523 4.4E-84 T 11-10-2018 SYN_01398 21e0f856e28275ed686827376401259b 523 SUPERFAMILY SSF52096 13 263 7.58E-72 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily SYN_02953 bbe48a4960129159638ce6fb26b96960 434 Pfam PF00365 Phosphofructokinase 81 381 2.0E-61 T 11-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 SYN_02953 bbe48a4960129159638ce6fb26b96960 434 PIRSF PIRSF000534 5 434 8.2E-162 T 11-10-2018 IPR012004 Pyrophosphate-dependent phosphofructokinase TP0108-type GO:0003872|GO:0005524|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 SYN_02953 bbe48a4960129159638ce6fb26b96960 434 Hamap MF_01981 ATP-dependent 6-phosphofructokinase [pfkA]. 12 434 50.235 T 11-10-2018 IPR012004 Pyrophosphate-dependent phosphofructokinase TP0108-type GO:0003872|GO:0005524|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 SYN_02953 bbe48a4960129159638ce6fb26b96960 434 Gene3D G3DSA:3.40.50.450 74 262 7.1E-63 T 11-10-2018 SYN_02953 bbe48a4960129159638ce6fb26b96960 434 SUPERFAMILY SSF53784 42 433 1.96E-118 T 11-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 SYN_02953 bbe48a4960129159638ce6fb26b96960 434 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 202 219 1.3E-21 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 SYN_02953 bbe48a4960129159638ce6fb26b96960 434 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 295 307 1.3E-21 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 SYN_02953 bbe48a4960129159638ce6fb26b96960 434 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 82 101 1.3E-21 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 SYN_02953 bbe48a4960129159638ce6fb26b96960 434 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 169 185 1.3E-21 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 SYN_02953 bbe48a4960129159638ce6fb26b96960 434 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 241 257 1.3E-21 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 SYN_00031 2344dac2bdda2a410301a373bcc65181 147 Gene3D G3DSA:2.60.40.790 6 145 2.0E-33 T 11-10-2018 IPR008978 HSP20-like chaperone SYN_00031 2344dac2bdda2a410301a373bcc65181 147 SUPERFAMILY SSF49764 15 144 1.07E-34 T 11-10-2018 IPR008978 HSP20-like chaperone SYN_00031 2344dac2bdda2a410301a373bcc65181 147 Pfam PF00011 Hsp20/alpha crystallin family 49 144 2.1E-18 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain SYN_01496 69ba728a60c17dc6f01ab2bc48b0cb1a 403 SUPERFAMILY SSF52540 133 375 6.6E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01496 69ba728a60c17dc6f01ab2bc48b0cb1a 403 SUPERFAMILY SSF52172 40 121 1.33E-5 T 11-10-2018 IPR011006 CheY-like superfamily SYN_01496 69ba728a60c17dc6f01ab2bc48b0cb1a 403 Pfam PF13614 AAA domain 133 294 3.6E-13 T 11-10-2018 IPR025669 AAA domain SYN_01496 69ba728a60c17dc6f01ab2bc48b0cb1a 403 Gene3D G3DSA:3.40.50.300 132 371 1.0E-47 T 11-10-2018 SYN_02915 81d6e593896265cee9cb5c091a355962 134 Gene3D G3DSA:1.10.10.10 67 129 3.1E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_01529 3b304e9344ace41c1b6467740ba925fc 432 Pfam PF03448 MgtE intracellular N domain 205 306 1.5E-27 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain SYN_01529 3b304e9344ace41c1b6467740ba925fc 432 Gene3D G3DSA:3.10.580.10 304 430 4.4E-37 T 11-10-2018 SYN_01529 3b304e9344ace41c1b6467740ba925fc 432 Pfam PF00571 CBS domain 373 426 2.1E-4 T 11-10-2018 IPR000644 CBS domain SYN_01529 3b304e9344ace41c1b6467740ba925fc 432 Pfam PF00571 CBS domain 309 366 2.2E-7 T 11-10-2018 IPR000644 CBS domain SYN_01529 3b304e9344ace41c1b6467740ba925fc 432 SUPERFAMILY SSF158791 197 305 1.44E-28 T 11-10-2018 SYN_01529 3b304e9344ace41c1b6467740ba925fc 432 Gene3D G3DSA:1.25.60.10 194 303 8.9E-26 T 11-10-2018 IPR038076 MgtE, N-terminal domain superfamily SYN_01529 3b304e9344ace41c1b6467740ba925fc 432 SMART SM00116 315 368 2.4 T 11-10-2018 IPR000644 CBS domain SYN_01529 3b304e9344ace41c1b6467740ba925fc 432 SMART SM00116 379 427 6.3 T 11-10-2018 IPR000644 CBS domain SYN_01529 3b304e9344ace41c1b6467740ba925fc 432 SUPERFAMILY SSF54631 307 427 7.96E-27 T 11-10-2018 SYN_01529 3b304e9344ace41c1b6467740ba925fc 432 SMART SM00924 205 308 1.8E-34 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain SYN_00965 71b7f1854c94cc167ab3ce2f4622cfcd 172 Pfam PF03975 CheD chemotactic sensory transduction 57 151 5.8E-20 T 11-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 SYN_00965 71b7f1854c94cc167ab3ce2f4622cfcd 172 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 6 157 22.946 T 11-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 SYN_00965 71b7f1854c94cc167ab3ce2f4622cfcd 172 Gene3D G3DSA:3.30.1330.200 11 161 6.5E-35 T 11-10-2018 IPR038592 CheD-like superfamily SYN_00965 71b7f1854c94cc167ab3ce2f4622cfcd 172 SUPERFAMILY SSF64438 11 159 6.96E-35 T 11-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic SYN_01912 9d3bdfcf25807e51dde3c994ff45872d 817 Pfam PF12705 PD-(D/E)XK nuclease superfamily 537 800 2.0E-26 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type SYN_01912 9d3bdfcf25807e51dde3c994ff45872d 817 Gene3D G3DSA:3.90.320.10 529 799 2.2E-7 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal SYN_00245 d7f9b285fbfd18d9f784dafe5580d235 393 Pfam PF00872 Transposase, Mutator family 8 380 1.3E-67 T 11-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 SYN_02449 0b78fa839df4f6919e4bc8a3abe95dc8 344 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 1 35 2.0E-7 T 11-10-2018 IPR011723 Zinc finger/thioredoxin putative SYN_02449 0b78fa839df4f6919e4bc8a3abe95dc8 344 Pfam PF11906 Protein of unknown function (DUF3426) 169 330 6.0E-11 T 11-10-2018 IPR021834 Protein of unknown function DUF3426 SYN_02449 0b78fa839df4f6919e4bc8a3abe95dc8 344 Pfam PF13717 zinc-ribbon domain 1 36 6.8E-13 T 11-10-2018 IPR011723 Zinc finger/thioredoxin putative SYN_02027 2f5e361504b910bfc50234b94f1498a3 172 Pfam PF02631 RecX family 37 162 1.2E-24 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 SYN_02027 2f5e361504b910bfc50234b94f1498a3 172 Hamap MF_01114 Regulatory protein RecX [recX]. 6 164 13.448 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 SYN_02027 2f5e361504b910bfc50234b94f1498a3 172 Gene3D G3DSA:1.10.10.10 13 59 4.6E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_00675 cfa87fc2cebc46eedc49061976c2e32c 115 ProDom PD052877 ARCHAEL AF0269 2 53 5.0E-15 T 11-10-2018 SYN_00675 cfa87fc2cebc46eedc49061976c2e32c 115 SUPERFAMILY SSF75169 1 115 7.06E-11 T 11-10-2018 IPR027396 DsrEFH-like SYN_02376 d92712fb6abcbbd594321f6e0636b8b0 89 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 1.2E-22 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_02376 d92712fb6abcbbd594321f6e0636b8b0 89 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 85 5.0E-14 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_02376 d92712fb6abcbbd594321f6e0636b8b0 89 Pfam PF01649 Ribosomal protein S20 2 84 2.8E-26 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_02376 d92712fb6abcbbd594321f6e0636b8b0 89 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.355 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_02376 d92712fb6abcbbd594321f6e0636b8b0 89 Gene3D G3DSA:1.20.58.110 1 86 4.2E-27 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_02376 d92712fb6abcbbd594321f6e0636b8b0 89 SUPERFAMILY SSF46992 4 86 1.7E-27 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_01046 a80c518a630bc89d4e72263d0ae951ed 262 SUPERFAMILY SSF159713 6 233 3.27E-49 T 11-10-2018 SYN_01046 a80c518a630bc89d4e72263d0ae951ed 262 Pfam PF13938 Putative heavy-metal chelation 9 95 1.0E-16 T 11-10-2018 IPR025251 Domain of unknown function DUF4213 SYN_01046 a80c518a630bc89d4e72263d0ae951ed 262 Gene3D G3DSA:3.40.50.11590 118 220 5.9E-24 T 11-10-2018 SYN_01046 a80c518a630bc89d4e72263d0ae951ed 262 Pfam PF04016 Putative heavy-metal chelation 107 240 3.9E-31 T 11-10-2018 IPR007161 Putative heavy-metal chelation domain SYN_01457 6fc38f18e3d218d739cbba913ec24a09 377 Pfam PF12698 ABC-2 family transporter protein 26 369 1.8E-47 T 11-10-2018 SYN_00662 afaeb127fbb12255cea9e4260423465d 80 Pfam PF02371 Transposase IS116/IS110/IS902 family 31 80 2.5E-12 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 SYN_02099 983d82cc7457956e8ab112df58c5f578 108 TIGRFAM TIGR02230 ATPase_gene1: putative F0F1-ATPase subunit 10 101 3.4E-37 T 11-10-2018 IPR011744 F0F1-ATPase subunit, putative SYN_02099 983d82cc7457956e8ab112df58c5f578 108 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 46 98 1.4E-11 T 11-10-2018 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter SYN_02542 c0f503fb35f1064ed20801c7367a06c0 346 Gene3D G3DSA:3.60.10.10 97 345 6.1E-36 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily SYN_02542 c0f503fb35f1064ed20801c7367a06c0 346 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 101 334 7.8E-11 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase SYN_02542 c0f503fb35f1064ed20801c7367a06c0 346 SUPERFAMILY SSF56219 92 344 1.01E-34 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily SYN_00814 2ddc42db8f72e66a66de532f734e7a26 123 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site SYN_00814 2ddc42db8f72e66a66de532f734e7a26 123 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 34 3.8E-11 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site SYN_00814 2ddc42db8f72e66a66de532f734e7a26 123 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 33 1.8E-11 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site SYN_00814 2ddc42db8f72e66a66de532f734e7a26 123 Gene3D G3DSA:3.30.700.10 14 123 4.8E-26 T 11-10-2018 SYN_00814 2ddc42db8f72e66a66de532f734e7a26 123 SUPERFAMILY SSF54523 14 75 3.14E-21 T 11-10-2018 SYN_00208 db8a6aff68721eab74bf672233b190c5 259 Pfam PF02361 Cobalt transport protein 10 231 1.1E-43 T 11-10-2018 IPR003339 ABC/ECF transporter, transmembrane component SYN_00585 692c470b8c4198442c1cbecf1cee39bf 322 Gene3D G3DSA:3.40.50.720 9 295 2.8E-102 T 11-10-2018 SYN_00585 692c470b8c4198442c1cbecf1cee39bf 322 Gene3D G3DSA:3.90.25.10 172 308 2.8E-102 T 11-10-2018 SYN_00585 692c470b8c4198442c1cbecf1cee39bf 322 SUPERFAMILY SSF51735 3 312 1.79E-75 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_00585 692c470b8c4198442c1cbecf1cee39bf 322 Pfam PF01370 NAD dependent epimerase/dehydratase family 10 241 1.6E-58 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 SYN_00585 692c470b8c4198442c1cbecf1cee39bf 322 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 7 310 44.224 T 11-10-2018 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00051+1.1.1.271|KEGG: 00520+1.1.1.271|MetaCyc: PWY-66|Reactome: R-HSA-6787639 SYN_00271 8e51d3dfa89716c427a1e98cd0299b3e 351 Pfam PF03459 TOBE domain 288 346 2.1E-10 T 11-10-2018 IPR005116 Transport-associated OB, type 1 SYN_00271 8e51d3dfa89716c427a1e98cd0299b3e 351 SMART SM00382 23 210 3.7E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00271 8e51d3dfa89716c427a1e98cd0299b3e 351 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 3 347 7.4E-115 T 11-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 SYN_00271 8e51d3dfa89716c427a1e98cd0299b3e 351 Gene3D G3DSA:3.40.50.300 3 232 5.9E-58 T 11-10-2018 SYN_00271 8e51d3dfa89716c427a1e98cd0299b3e 351 SUPERFAMILY SSF52540 6 233 2.32E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00271 8e51d3dfa89716c427a1e98cd0299b3e 351 Pfam PF00005 ABC transporter 24 160 8.6E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_00271 8e51d3dfa89716c427a1e98cd0299b3e 351 SUPERFAMILY SSF50331 233 348 3.64E-16 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal SYN_00271 8e51d3dfa89716c427a1e98cd0299b3e 351 Gene3D G3DSA:2.40.50.100 274 345 2.0E-14 T 11-10-2018 SYN_00271 8e51d3dfa89716c427a1e98cd0299b3e 351 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_01506 485f377cfeaca0106f41e0c648bd8176 464 Pfam PF13635 Domain of unknown function (DUF4143) 286 386 9.8E-9 T 11-10-2018 IPR025420 Domain of unknown function DUF4143 SYN_01506 485f377cfeaca0106f41e0c648bd8176 464 SUPERFAMILY SSF52540 48 258 4.24E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01506 485f377cfeaca0106f41e0c648bd8176 464 Pfam PF13173 AAA domain 62 196 2.5E-34 T 11-10-2018 SYN_01506 485f377cfeaca0106f41e0c648bd8176 464 SMART SM00382 61 208 5.4E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01505 3d8342d1a41b22c756e911342f3b92b6 447 SMART SM00327 140 438 7.1E-25 T 11-10-2018 IPR002035 von Willebrand factor, type A SYN_01505 3d8342d1a41b22c756e911342f3b92b6 447 Pfam PF00092 von Willebrand factor type A domain 143 292 7.1E-15 T 11-10-2018 IPR002035 von Willebrand factor, type A SYN_01505 3d8342d1a41b22c756e911342f3b92b6 447 Pfam PF00092 von Willebrand factor type A domain 386 435 9.0E-6 T 11-10-2018 IPR002035 von Willebrand factor, type A SYN_01505 3d8342d1a41b22c756e911342f3b92b6 447 Gene3D G3DSA:3.40.50.410 130 289 1.5E-24 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily SYN_01505 3d8342d1a41b22c756e911342f3b92b6 447 Gene3D G3DSA:3.40.50.410 362 444 5.2E-11 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily SYN_01505 3d8342d1a41b22c756e911342f3b92b6 447 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 10 56 1.2E-12 T 11-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal SYN_01505 3d8342d1a41b22c756e911342f3b92b6 447 SUPERFAMILY SSF53300 135 439 6.68E-32 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily SYN_00636 95d6d47b619369d5e090a60567f7bae2 293 Gene3D G3DSA:3.90.1670.10 16 290 1.8E-36 T 11-10-2018 IPR024064 FdhE-like superfamily SYN_00636 95d6d47b619369d5e090a60567f7bae2 293 Pfam PF04216 Protein involved in formate dehydrogenase formation 5 287 4.4E-54 T 11-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 SYN_00636 95d6d47b619369d5e090a60567f7bae2 293 SUPERFAMILY SSF144020 14 291 1.27E-58 T 11-10-2018 IPR024064 FdhE-like superfamily SYN_00028 af94c4e39bbacf401ba83a61e2e51a3a 96 SMART SM00883 2 94 9.7E-57 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SYN_00028 af94c4e39bbacf401ba83a61e2e51a3a 96 SUPERFAMILY SSF50129 1 95 1.88E-34 T 11-10-2018 IPR011032 GroES-like superfamily SYN_00028 af94c4e39bbacf401ba83a61e2e51a3a 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 26.347 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SYN_00028 af94c4e39bbacf401ba83a61e2e51a3a 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 1.6E-35 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SYN_00028 af94c4e39bbacf401ba83a61e2e51a3a 96 PRINTS PR00297 10kDa chaperonin signature 60 72 4.1E-30 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SYN_00028 af94c4e39bbacf401ba83a61e2e51a3a 96 PRINTS PR00297 10kDa chaperonin signature 81 94 4.1E-30 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SYN_00028 af94c4e39bbacf401ba83a61e2e51a3a 96 PRINTS PR00297 10kDa chaperonin signature 25 46 4.1E-30 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SYN_00028 af94c4e39bbacf401ba83a61e2e51a3a 96 PRINTS PR00297 10kDa chaperonin signature 3 18 4.1E-30 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SYN_00028 af94c4e39bbacf401ba83a61e2e51a3a 96 Gene3D G3DSA:2.30.33.40 1 96 6.1E-39 T 11-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 SYN_02586 3b9cc7e3c1bbaffd4197af4608eb8493 384 Gene3D G3DSA:2.40.110.10 123 235 7.1E-44 T 11-10-2018 SYN_02586 3b9cc7e3c1bbaffd4197af4608eb8493 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 378 5.0E-44 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SYN_02586 3b9cc7e3c1bbaffd4197af4608eb8493 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 117 3.7E-15 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 SYN_02586 3b9cc7e3c1bbaffd4197af4608eb8493 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 124 218 1.4E-28 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 SYN_02586 3b9cc7e3c1bbaffd4197af4608eb8493 384 Gene3D G3DSA:1.20.140.10 236 384 1.6E-48 T 11-10-2018 SYN_02586 3b9cc7e3c1bbaffd4197af4608eb8493 384 SUPERFAMILY SSF47203 228 380 4.35E-51 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 SYN_02586 3b9cc7e3c1bbaffd4197af4608eb8493 384 Gene3D G3DSA:1.10.540.10 11 120 8.8E-21 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 SYN_02586 3b9cc7e3c1bbaffd4197af4608eb8493 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 SYN_02586 3b9cc7e3c1bbaffd4197af4608eb8493 384 SUPERFAMILY SSF56645 6 237 4.97E-68 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 SYN_02586 3b9cc7e3c1bbaffd4197af4608eb8493 384 PIRSF PIRSF016578 135 369 2.8E-15 T 11-10-2018 SYN_02586 3b9cc7e3c1bbaffd4197af4608eb8493 384 PIRSF PIRSF016578 2 99 8.1E-10 T 11-10-2018 SYN_02372 bb53edbd1f4fcdd8d6e308fe01576152 154 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 9 154 31.474 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SYN_02372 bb53edbd1f4fcdd8d6e308fe01576152 154 Gene3D G3DSA:3.40.50.960 3 154 4.1E-62 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SYN_02372 bb53edbd1f4fcdd8d6e308fe01576152 154 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 6.9E-59 T 11-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SYN_02372 bb53edbd1f4fcdd8d6e308fe01576152 154 SUPERFAMILY SSF52121 5 154 3.53E-62 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SYN_02372 bb53edbd1f4fcdd8d6e308fe01576152 154 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 6.7E-57 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 SYN_03100 25682c858d5a75f3ed9a7c1d56b5e342 191 Pfam PF13548 Domain of unknown function (DUF4126) 8 177 5.2E-53 T 11-10-2018 IPR025196 Domain of unknown function DUF4126 SYN_00746 48106b478e29c0e8896db9e7c6955547 828 Pfam PF02687 FtsX-like permease family 726 820 2.8E-9 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 SYN_01651 23e577b844a69f6e26cc01a0c428f253 335 SUPERFAMILY SSF102114 30 328 7.59E-52 T 11-10-2018 SYN_01651 23e577b844a69f6e26cc01a0c428f253 335 Pfam PF16199 Radical_SAM C-terminal domain 234 317 1.0E-22 T 11-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 SYN_01651 23e577b844a69f6e26cc01a0c428f253 335 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 29 327 4.5E-108 T 11-10-2018 IPR005911 Protein YhcC-like GO:0051536 SYN_01651 23e577b844a69f6e26cc01a0c428f253 335 Pfam PF04055 Radical SAM superfamily 66 227 3.4E-18 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_01651 23e577b844a69f6e26cc01a0c428f253 335 Gene3D G3DSA:3.80.30.20 65 261 2.5E-17 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe SYN_01651 23e577b844a69f6e26cc01a0c428f253 335 SMART SM00729 46 273 3.4E-41 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SYN_02239 e8ba910509a5c8a92af2cca1f9b4778a 92 Pfam PF09827 CRISPR associated protein Cas2 1 72 4.1E-18 T 11-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 SYN_02239 e8ba910509a5c8a92af2cca1f9b4778a 92 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 1 91 3.3E-16 T 11-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 SYN_02239 e8ba910509a5c8a92af2cca1f9b4778a 92 SUPERFAMILY SSF143430 1 83 9.94E-21 T 11-10-2018 SYN_02239 e8ba910509a5c8a92af2cca1f9b4778a 92 Gene3D G3DSA:3.30.70.240 1 92 8.0E-23 T 11-10-2018 SYN_02239 e8ba910509a5c8a92af2cca1f9b4778a 92 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 1 90 15.66 T 11-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 SYN_02239 e8ba910509a5c8a92af2cca1f9b4778a 92 PIRSF PIRSF032582 1 92 4.7E-20 T 11-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 SYN_02364 15aaf44cc7a63cef8cc7a4fb31407d8d 80 Gene3D G3DSA:1.10.1200.10 2 74 3.0E-21 T 11-10-2018 IPR036736 ACP-like superfamily SYN_02364 15aaf44cc7a63cef8cc7a4fb31407d8d 80 Hamap MF_01217 Acyl carrier protein [acpP]. 2 76 17.758 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 SYN_02364 15aaf44cc7a63cef8cc7a4fb31407d8d 80 SUPERFAMILY SSF47336 3 72 1.2E-17 T 11-10-2018 IPR036736 ACP-like superfamily SYN_02364 15aaf44cc7a63cef8cc7a4fb31407d8d 80 Pfam PF00550 Phosphopantetheine attachment site 5 72 2.8E-15 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain SYN_02364 15aaf44cc7a63cef8cc7a4fb31407d8d 80 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 3 74 1.9E-23 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 SYN_01853 82b4e33913b9bab8adfa0cbe7b6c819a 63 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 14 61 3.4E-19 T 11-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 SYN_01853 82b4e33913b9bab8adfa0cbe7b6c819a 63 SUPERFAMILY SSF46955 13 61 4.03E-8 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily SYN_01853 82b4e33913b9bab8adfa0cbe7b6c819a 63 Gene3D G3DSA:1.10.1660.10 9 61 1.4E-5 T 11-10-2018 SYN_01853 82b4e33913b9bab8adfa0cbe7b6c819a 63 Pfam PF12728 Helix-turn-helix domain 13 62 6.4E-20 T 11-10-2018 SYN_01921 daa8ef4e71f6eab9d391f62a14fe72db 188 Gene3D G3DSA:1.10.8.60 35 102 8.1E-26 T 11-10-2018 SYN_01921 daa8ef4e71f6eab9d391f62a14fe72db 188 SUPERFAMILY SSF46689 134 183 4.35E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SYN_01921 daa8ef4e71f6eab9d391f62a14fe72db 188 Gene3D G3DSA:1.10.10.60 103 187 4.9E-6 T 11-10-2018 SYN_01921 daa8ef4e71f6eab9d391f62a14fe72db 188 Pfam PF00158 Sigma-54 interaction domain 1 31 8.4E-7 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SYN_01921 daa8ef4e71f6eab9d391f62a14fe72db 188 Gene3D G3DSA:3.40.50.300 1 34 1.9E-8 T 11-10-2018 SYN_01921 daa8ef4e71f6eab9d391f62a14fe72db 188 SUPERFAMILY SSF52540 1 107 9.75E-23 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01921 daa8ef4e71f6eab9d391f62a14fe72db 188 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 77 86 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site SYN_02476 09ebce012d05e88afd3e377267a9325a 641 Pfam PF09709 CRISPR-associated protein (Cas_Csd1) 20 614 4.5E-137 T 11-10-2018 IPR010144 CRISPR-associated protein, Csd1-type SYN_02476 09ebce012d05e88afd3e377267a9325a 641 TIGRFAM TIGR01863 cas_Csd1: CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG 26 621 2.4E-100 T 11-10-2018 IPR010144 CRISPR-associated protein, Csd1-type SYN_01563 6b09ebb8fc893e10ced643b992b55e5b 374 SUPERFAMILY SSF52540 58 175 2.24E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01563 6b09ebb8fc893e10ced643b992b55e5b 374 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 24 369 4.0E-100 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 SYN_01563 6b09ebb8fc893e10ced643b992b55e5b 374 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 23 343 1.3E-70 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 SYN_01563 6b09ebb8fc893e10ced643b992b55e5b 374 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 6 372 33.911 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 SYN_00815 36a8231b3c7d12798ba0b681b88271d9 559 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 99 240 1.2E-9 T 11-10-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 SYN_03377 25ec72614fc983d9f3531fc4d15eb663 86 SUPERFAMILY SSF57716 50 85 6.41E-8 T 11-10-2018 SYN_03377 25ec72614fc983d9f3531fc4d15eb663 86 Gene3D G3DSA:1.20.120.910 1 85 4.0E-14 T 11-10-2018 SYN_03377 25ec72614fc983d9f3531fc4d15eb663 86 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 48 81 7.0E-12 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 SYN_01131 fbe2582c7f47d90f6c29c90cb1a55df6 531 Pfam PF02397 Bacterial sugar transferase 30 222 1.5E-54 T 11-10-2018 IPR003362 Bacterial sugar transferase SYN_01131 fbe2582c7f47d90f6c29c90cb1a55df6 531 Pfam PF13727 CoA-binding domain 311 466 3.7E-10 T 11-10-2018 SYN_01131 fbe2582c7f47d90f6c29c90cb1a55df6 531 Gene3D G3DSA:3.40.50.720 385 512 3.4E-17 T 11-10-2018 SYN_00903 98e4de0c9ac8fff0c7b23b4c5a5ba23c 233 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 37 230 4.4E-43 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 SYN_00903 98e4de0c9ac8fff0c7b23b4c5a5ba23c 233 SMART SM00646 97 230 1.6E-22 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 SYN_00903 98e4de0c9ac8fff0c7b23b4c5a5ba23c 233 SUPERFAMILY SSF53187 35 233 8.16E-38 T 11-10-2018 SYN_00903 98e4de0c9ac8fff0c7b23b4c5a5ba23c 233 Gene3D G3DSA:3.40.630.40 30 233 1.3E-49 T 11-10-2018 SYN_02732 6d9bca03723253b126a79ee4994dadb2 426 Pfam PF13657 HipA N-terminal domain 22 120 7.2E-27 T 11-10-2018 IPR017508 HipA, N-terminal subdomain 1 SYN_02732 6d9bca03723253b126a79ee4994dadb2 426 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 22 120 2.4E-29 T 11-10-2018 IPR017508 HipA, N-terminal subdomain 1 SYN_02732 6d9bca03723253b126a79ee4994dadb2 426 Pfam PF07804 HipA-like C-terminal domain 162 391 7.8E-53 T 11-10-2018 IPR012893 HipA-like, C-terminal SYN_02791 f4c3b691ef6fc788d7b2be7eb07e6247 654 SMART SM00257 536 579 1.6E-11 T 11-10-2018 IPR018392 LysM domain SYN_02791 f4c3b691ef6fc788d7b2be7eb07e6247 654 SMART SM00257 610 654 2.0E-11 T 11-10-2018 IPR018392 LysM domain SYN_02791 f4c3b691ef6fc788d7b2be7eb07e6247 654 SMART SM00257 461 505 1.2E-10 T 11-10-2018 IPR018392 LysM domain SYN_02791 f4c3b691ef6fc788d7b2be7eb07e6247 654 Gene3D G3DSA:3.10.350.10 595 654 4.8E-13 T 11-10-2018 IPR036779 LysM domain superfamily SYN_02791 f4c3b691ef6fc788d7b2be7eb07e6247 654 Gene3D G3DSA:3.10.350.10 522 588 8.3E-12 T 11-10-2018 IPR036779 LysM domain superfamily SYN_02791 f4c3b691ef6fc788d7b2be7eb07e6247 654 Gene3D G3DSA:3.10.350.10 446 513 2.1E-14 T 11-10-2018 IPR036779 LysM domain superfamily SYN_02791 f4c3b691ef6fc788d7b2be7eb07e6247 654 Pfam PF01464 Transglycosylase SLT domain 207 308 2.5E-22 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 SYN_02791 f4c3b691ef6fc788d7b2be7eb07e6247 654 SUPERFAMILY SSF54106 535 578 1.2E-8 T 11-10-2018 SYN_02791 f4c3b691ef6fc788d7b2be7eb07e6247 654 Gene3D G3DSA:1.10.530.10 199 355 1.3E-29 T 11-10-2018 SYN_02791 f4c3b691ef6fc788d7b2be7eb07e6247 654 SUPERFAMILY SSF54106 460 505 1.14E-8 T 11-10-2018 SYN_02791 f4c3b691ef6fc788d7b2be7eb07e6247 654 Pfam PF01476 LysM domain 611 653 1.3E-10 T 11-10-2018 IPR018392 LysM domain SYN_02791 f4c3b691ef6fc788d7b2be7eb07e6247 654 Pfam PF01476 LysM domain 462 505 4.0E-12 T 11-10-2018 IPR018392 LysM domain SYN_02791 f4c3b691ef6fc788d7b2be7eb07e6247 654 Pfam PF01476 LysM domain 537 578 3.3E-11 T 11-10-2018 IPR018392 LysM domain SYN_02791 f4c3b691ef6fc788d7b2be7eb07e6247 654 SUPERFAMILY SSF53955 201 353 4.84E-35 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily SYN_02791 f4c3b691ef6fc788d7b2be7eb07e6247 654 SUPERFAMILY SSF54106 609 653 1.57E-9 T 11-10-2018 SYN_02408 fe005d7b70d669b7303c84f59c5a58d9 396 Pfam PF13353 4Fe-4S single cluster domain 25 127 7.8E-6 T 11-10-2018 SYN_02408 fe005d7b70d669b7303c84f59c5a58d9 396 SUPERFAMILY SSF102114 24 342 6.93E-29 T 11-10-2018 SYN_02408 fe005d7b70d669b7303c84f59c5a58d9 396 Gene3D G3DSA:3.20.20.70 21 381 2.2E-52 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_02408 fe005d7b70d669b7303c84f59c5a58d9 396 TIGRFAM TIGR04115 rSAM_Cxxx_rpt: radical SAM peptide maturase, CXXX-repeat target family 21 379 3.5E-213 T 11-10-2018 IPR026412 Radical SAM peptide maturase, CXXX-repeat target SYN_01411 bdb1568505871450dd614cf3298fcf3c 348 PIRSF PIRSF006004 3 348 1.2E-131 T 11-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 SYN_01411 bdb1568505871450dd614cf3298fcf3c 348 Gene3D G3DSA:3.20.20.70 67 330 9.8E-102 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_01411 bdb1568505871450dd614cf3298fcf3c 348 Pfam PF04055 Radical SAM superfamily 108 268 1.3E-13 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_01411 bdb1568505871450dd614cf3298fcf3c 348 Gene3D G3DSA:1.10.150.530 5 66 6.5E-23 T 11-10-2018 SYN_01411 bdb1568505871450dd614cf3298fcf3c 348 SUPERFAMILY SSF102114 104 292 2.88E-11 T 11-10-2018 SYN_01411 bdb1568505871450dd614cf3298fcf3c 348 Pfam PF13394 4Fe-4S single cluster domain 113 200 1.7E-5 T 11-10-2018 SYN_01411 bdb1568505871450dd614cf3298fcf3c 348 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 345 73.199 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 SYN_01411 bdb1568505871450dd614cf3298fcf3c 348 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 4 346 9.2E-123 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 SYN_02541 bb105d541ca23e83fe86ca1fad860add 454 Pfam PF03631 Virulence factor BrkB 59 312 3.1E-56 T 11-10-2018 IPR017039 Virulence factor BrkB SYN_02541 bb105d541ca23e83fe86ca1fad860add 454 SUPERFAMILY SSF46785 336 415 8.49E-5 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_02541 bb105d541ca23e83fe86ca1fad860add 454 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 55 309 1.4E-33 T 11-10-2018 IPR017039 Virulence factor BrkB SYN_01558 f3f3e181bf40a2bcb46784f3dd36e098 285 SUPERFAMILY SSF50156 192 282 3.09E-13 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 SYN_01558 f3f3e181bf40a2bcb46784f3dd36e098 285 Pfam PF11356 Type II secretion system protein C 21 166 9.2E-12 T 11-10-2018 IPR024961 Type II secretion system protein C, N-terminal SYN_01558 f3f3e181bf40a2bcb46784f3dd36e098 285 Gene3D G3DSA:2.30.42.10 184 283 7.1E-16 T 11-10-2018 SYN_01933 361c9741e1d44c5422cd4fe2f92e8126 270 Gene3D G3DSA:3.40.50.720 1 151 2.7E-43 T 11-10-2018 SYN_01933 361c9741e1d44c5422cd4fe2f92e8126 270 SUPERFAMILY SSF51735 1 143 4.14E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_01933 361c9741e1d44c5422cd4fe2f92e8126 270 Pfam PF02153 Prephenate dehydrogenase 44 249 8.3E-38 T 11-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 SYN_01933 361c9741e1d44c5422cd4fe2f92e8126 270 SUPERFAMILY SSF48179 146 265 2.04E-27 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 SYN_01933 361c9741e1d44c5422cd4fe2f92e8126 270 Gene3D G3DSA:1.10.3660.10 153 262 4.8E-20 T 11-10-2018 SYN_00646 eadeef03eb3531c6479caf69bc4baa3c 228 Pfam PF13549 ATP-grasp domain 15 227 1.4E-75 T 11-10-2018 SYN_00646 eadeef03eb3531c6479caf69bc4baa3c 228 Gene3D G3DSA:3.30.1490.20 36 113 2.2E-72 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 SYN_00646 eadeef03eb3531c6479caf69bc4baa3c 228 Gene3D G3DSA:3.30.470.20 18 225 2.2E-72 T 11-10-2018 SYN_00646 eadeef03eb3531c6479caf69bc4baa3c 228 SUPERFAMILY SSF56059 22 227 3.3E-39 T 11-10-2018 SYN_00632 efc7e694ff778719e5b0b57a89b5370e 221 Gene3D G3DSA:1.20.950.20 2 208 2.6E-60 T 11-10-2018 SYN_00632 efc7e694ff778719e5b0b57a89b5370e 221 SUPERFAMILY SSF81342 6 208 1.18E-41 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 SYN_00632 efc7e694ff778719e5b0b57a89b5370e 221 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 7 203 1.3E-45 T 11-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 SYN_00632 efc7e694ff778719e5b0b57a89b5370e 221 Pfam PF01292 Prokaryotic cytochrome b561 10 184 2.0E-26 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SYN_00535 24a1b87efdce69199cc136864d707fc4 191 SUPERFAMILY SSF140478 33 180 2.35E-58 T 11-10-2018 IPR023353 LemA-like domain superfamily SYN_00535 24a1b87efdce69199cc136864d707fc4 191 Pfam PF04011 LemA family 14 191 2.6E-72 T 11-10-2018 IPR007156 LemA SYN_00535 24a1b87efdce69199cc136864d707fc4 191 Gene3D G3DSA:1.20.1440.20 23 191 1.4E-71 T 11-10-2018 IPR023353 LemA-like domain superfamily SYN_00091 65e9ba4bcebda26b52c9cb429eae8560 420 ProSitePatterns PS00450 Aconitase family signature 1. 292 308 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 SYN_00091 65e9ba4bcebda26b52c9cb429eae8560 420 Pfam PF00330 Aconitase family (aconitate hydratase) 7 411 7.1E-95 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 SYN_00091 65e9ba4bcebda26b52c9cb429eae8560 420 Gene3D G3DSA:3.30.499.20 4 270 7.4E-104 T 11-10-2018 SYN_00091 65e9ba4bcebda26b52c9cb429eae8560 420 TIGRFAM TIGR02083 LEU2: 3-isopropylmalate dehydratase, large subunit 3 419 1.6E-217 T 11-10-2018 IPR011823 3-isopropylmalate dehydratase, large subunit, bacteria GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 SYN_00091 65e9ba4bcebda26b52c9cb429eae8560 420 Gene3D G3DSA:3.30.499.10 273 420 1.8E-52 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 SYN_00091 65e9ba4bcebda26b52c9cb429eae8560 420 TIGRFAM TIGR02086 IPMI_arch: 3-isopropylmalate dehydratase, large subunit 3 417 2.9E-154 T 11-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 SYN_00091 65e9ba4bcebda26b52c9cb429eae8560 420 Hamap MF_01027 3-isopropylmalate dehydratase large subunit [leuC]. 3 419 49.756 T 11-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 SYN_00091 65e9ba4bcebda26b52c9cb429eae8560 420 TIGRFAM TIGR01343 hacA_fam: homoaconitate hydratase family protein 4 416 1.7E-177 T 11-10-2018 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit GO:0008652|GO:0016836|GO:0051539 KEGG: 00290+4.2.1.33 SYN_00091 65e9ba4bcebda26b52c9cb429eae8560 420 SUPERFAMILY SSF53732 1 419 1.1E-145 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 SYN_00091 65e9ba4bcebda26b52c9cb429eae8560 420 PRINTS PR00415 Aconitase family signature 128 143 1.4E-17 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 SYN_00091 65e9ba4bcebda26b52c9cb429eae8560 420 PRINTS PR00415 Aconitase family signature 352 365 1.4E-17 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 SYN_00091 65e9ba4bcebda26b52c9cb429eae8560 420 PRINTS PR00415 Aconitase family signature 190 203 1.4E-17 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 SYN_00091 65e9ba4bcebda26b52c9cb429eae8560 420 PRINTS PR00415 Aconitase family signature 204 217 1.4E-17 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 SYN_00091 65e9ba4bcebda26b52c9cb429eae8560 420 PRINTS PR00415 Aconitase family signature 114 127 1.4E-17 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 SYN_00766 6167c07ccd3d6fe977b7df0e5d1f93ef 81 Gene3D G3DSA:3.30.300.20 4 80 6.0E-6 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta SYN_00766 6167c07ccd3d6fe977b7df0e5d1f93ef 81 Hamap MF_00088 UPF0109 protein . 6 80 22.053 T 11-10-2018 IPR020627 Uncharacterised protein family UPF0109 SYN_00766 6167c07ccd3d6fe977b7df0e5d1f93ef 81 SUPERFAMILY SSF54814 9 66 3.14E-7 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 SYN_00766 6167c07ccd3d6fe977b7df0e5d1f93ef 81 Pfam PF13083 KH domain 7 79 2.9E-23 T 11-10-2018 SYN_01872 6f4858e1ff45deffffe65196d0ffc40d 161 SUPERFAMILY SSF51306 41 161 2.04E-15 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily SYN_01872 6f4858e1ff45deffffe65196d0ffc40d 161 Gene3D G3DSA:2.10.109.10 35 160 2.3E-11 T 11-10-2018 SYN_01872 6f4858e1ff45deffffe65196d0ffc40d 161 Pfam PF10502 Signal peptidase, peptidase S26 61 160 4.8E-16 T 11-10-2018 IPR019533 Peptidase S26 SYN_00415 649406df216ee011ad1a33ccc17b91d1 359 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 3 356 1.2E-102 T 11-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 SYN_00415 649406df216ee011ad1a33ccc17b91d1 359 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 355 5.9E-82 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 SYN_00933 7b4f0e1c7ad6aa158080b950c53fe3f3 218 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 106 182 2.3E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 SYN_00933 7b4f0e1c7ad6aa158080b950c53fe3f3 218 SUPERFAMILY SSF56784 3 216 1.76E-36 T 11-10-2018 IPR036412 HAD-like superfamily SYN_00933 7b4f0e1c7ad6aa158080b950c53fe3f3 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 188 2.8E-22 T 11-10-2018 SYN_00933 7b4f0e1c7ad6aa158080b950c53fe3f3 218 Gene3D G3DSA:1.10.150.240 20 87 3.0E-29 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 SYN_00933 7b4f0e1c7ad6aa158080b950c53fe3f3 218 Gene3D G3DSA:3.40.50.1000 9 206 3.0E-29 T 11-10-2018 IPR023214 HAD superfamily SYN_01340 946311e458c1eba668940c8a2eb7de0a 264 Gene3D G3DSA:3.20.20.150 8 260 3.9E-50 T 11-10-2018 SYN_01340 946311e458c1eba668940c8a2eb7de0a 264 Pfam PF01261 Xylose isomerase-like TIM barrel 46 219 3.5E-20 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain SYN_01340 946311e458c1eba668940c8a2eb7de0a 264 SUPERFAMILY SSF51658 33 257 3.27E-37 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily SYN_02103 276f607c4781d747fe00190e91dde105 274 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 139 10.741 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SYN_02103 276f607c4781d747fe00190e91dde105 274 TIGRFAM TIGR03321 alt_F1F0_F0_B: alternate F1F0 ATPase, F0 subunit B 1 247 2.3E-99 T 11-10-2018 IPR017707 Alternate ATP synthase, F0 complex, subunit b SYN_02103 276f607c4781d747fe00190e91dde105 274 Pfam PF00430 ATP synthase B/B' CF(0) 8 137 3.6E-16 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SYN_00329 d74c285f022600d32ced4744470b41f1 315 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 45 210 1.1E-11 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 SYN_00329 d74c285f022600d32ced4744470b41f1 315 SMART SM00382 41 219 5.6E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00329 d74c285f022600d32ced4744470b41f1 315 SUPERFAMILY SSF52540 42 301 3.88E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00329 d74c285f022600d32ced4744470b41f1 315 Gene3D G3DSA:3.40.50.300 5 240 1.7E-28 T 11-10-2018 SYN_00329 d74c285f022600d32ced4744470b41f1 315 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 49 68 1.2E-6 T 11-10-2018 SYN_00329 d74c285f022600d32ced4744470b41f1 315 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 307 315 1.2E-6 T 11-10-2018 SYN_01158 63e24a2e29774f07ac942f6bf86bcfb9 235 Pfam PF00753 Metallo-beta-lactamase superfamily 28 73 5.1E-7 T 11-10-2018 IPR001279 Metallo-beta-lactamase SYN_01158 63e24a2e29774f07ac942f6bf86bcfb9 235 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 158 210 4.0E-6 T 11-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 SYN_01158 63e24a2e29774f07ac942f6bf86bcfb9 235 SMART SM00849 14 157 7.5E-22 T 11-10-2018 IPR001279 Metallo-beta-lactamase SYN_01158 63e24a2e29774f07ac942f6bf86bcfb9 235 Gene3D G3DSA:3.60.15.10 1 232 2.4E-50 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_01158 63e24a2e29774f07ac942f6bf86bcfb9 235 SUPERFAMILY SSF56281 6 210 2.24E-44 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_01025 6bfa32d31dad4adc089e30c987365e89 398 TIGRFAM TIGR00261 traB: TraB family protein 25 396 1.3E-101 T 11-10-2018 IPR005230 Pheromone shutdown, TraB, bacterial/archaeal SYN_01025 6bfa32d31dad4adc089e30c987365e89 398 Pfam PF01963 TraB family 23 242 1.2E-38 T 11-10-2018 IPR002816 Pheromone shutdown, TraB SYN_02400 db8e7523e0c15453d9f31940f4cfaa51 297 Gene3D G3DSA:3.90.226.10 3 236 7.4E-81 T 11-10-2018 SYN_02400 db8e7523e0c15453d9f31940f4cfaa51 297 Pfam PF00378 Enoyl-CoA hydratase/isomerase 29 291 2.6E-51 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 SYN_02400 db8e7523e0c15453d9f31940f4cfaa51 297 SUPERFAMILY SSF52096 11 294 2.8E-70 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily SYN_02400 db8e7523e0c15453d9f31940f4cfaa51 297 TIGRFAM TIGR01929 menB: naphthoate synthase 19 293 1.4E-121 T 11-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 SYN_02400 db8e7523e0c15453d9f31940f4cfaa51 297 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 11 296 52.672 T 11-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 SYN_02400 db8e7523e0c15453d9f31940f4cfaa51 297 Gene3D G3DSA:1.10.12.10 237 285 1.2E-24 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal SYN_02131 1aacc61f13450194a67b73e2df524b33 227 Gene3D G3DSA:3.40.50.360 1 225 2.0E-57 T 11-10-2018 IPR029039 Flavoprotein-like superfamily SYN_02131 1aacc61f13450194a67b73e2df524b33 227 SUPERFAMILY SSF52218 1 180 3.86E-48 T 11-10-2018 IPR029039 Flavoprotein-like superfamily SYN_02131 1aacc61f13450194a67b73e2df524b33 227 Pfam PF03358 NADPH-dependent FMN reductase 1 150 3.4E-30 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 SYN_02178 17d9cdb38497800aa8e3d474a4bd341e 263 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 92 259 2.4E-66 T 11-10-2018 IPR005273 Uracil-DNA glycosylase family 4 SYN_02178 17d9cdb38497800aa8e3d474a4bd341e 263 Gene3D G3DSA:3.40.470.10 80 262 9.4E-76 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 SYN_02178 17d9cdb38497800aa8e3d474a4bd341e 263 SMART SM00986 106 253 2.0E-45 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 SYN_02178 17d9cdb38497800aa8e3d474a4bd341e 263 Pfam PF03167 Uracil DNA glycosylase superfamily 106 253 1.3E-49 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 SYN_02178 17d9cdb38497800aa8e3d474a4bd341e 263 SMART SM00987 106 253 2.0E-45 T 11-10-2018 SYN_02178 17d9cdb38497800aa8e3d474a4bd341e 263 SUPERFAMILY SSF52141 80 259 1.31E-68 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 SYN_01180 1956f5d95c5b06837358daa3766acb03 126 Gene3D G3DSA:3.30.420.130 1 111 1.0E-24 T 11-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily SYN_01180 1956f5d95c5b06837358daa3766acb03 126 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 19 108 1.6E-17 T 11-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis SYN_01180 1956f5d95c5b06837358daa3766acb03 126 SUPERFAMILY SSF53146 5 125 2.75E-30 T 11-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily SYN_01985 bdc22f1e01873262c2211b3e302b5725 249 SUPERFAMILY SSF52402 6 99 1.51E-6 T 11-10-2018 SYN_01985 bdc22f1e01873262c2211b3e302b5725 249 Gene3D G3DSA:3.40.50.12370 8 249 2.6E-15 T 11-10-2018 SYN_01985 bdc22f1e01873262c2211b3e302b5725 249 SUPERFAMILY SSF52402 139 249 2.51E-5 T 11-10-2018 SYN_00105 fcaebd70c91f0ac4368a6f7a26f6d17c 118 Hamap MF_00634 UPF0235 protein YggU [yggU]. 9 97 19.84 T 11-10-2018 IPR003746 Protein of unknown function DUF167 SYN_00105 fcaebd70c91f0ac4368a6f7a26f6d17c 118 Gene3D G3DSA:3.30.1200.10 3 103 3.0E-26 T 11-10-2018 IPR036591 YggU-like superfamily SYN_00105 fcaebd70c91f0ac4368a6f7a26f6d17c 118 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 13 83 1.7E-23 T 11-10-2018 IPR003746 Protein of unknown function DUF167 SYN_00105 fcaebd70c91f0ac4368a6f7a26f6d17c 118 SMART SM01152 9 85 1.3E-32 T 11-10-2018 IPR003746 Protein of unknown function DUF167 SYN_00105 fcaebd70c91f0ac4368a6f7a26f6d17c 118 SUPERFAMILY SSF69786 4 89 2.22E-24 T 11-10-2018 IPR036591 YggU-like superfamily SYN_00225 59dbf1c87a5b42222a54517ac59b7be1 323 SUPERFAMILY SSF160240 228 303 5.23E-10 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 SYN_00225 59dbf1c87a5b42222a54517ac59b7be1 323 SUPERFAMILY SSF161111 32 224 6.8E-47 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily SYN_00225 59dbf1c87a5b42222a54517ac59b7be1 323 Pfam PF01545 Cation efflux family 35 224 2.1E-43 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SYN_00225 59dbf1c87a5b42222a54517ac59b7be1 323 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 32 306 5.1E-75 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SYN_00225 59dbf1c87a5b42222a54517ac59b7be1 323 Gene3D G3DSA:1.20.1510.10 31 224 3.3E-41 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily SYN_02183 737a97d9932dbc1963fdf023d5d51d12 314 SUPERFAMILY SSF141523 175 312 6.41E-24 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like SYN_02183 737a97d9932dbc1963fdf023d5d51d12 314 Gene3D G3DSA:2.40.440.10 110 314 3.9E-21 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like SYN_02183 737a97d9932dbc1963fdf023d5d51d12 314 Pfam PF03734 L,D-transpeptidase catalytic domain 178 312 5.8E-16 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 SYN_02183 737a97d9932dbc1963fdf023d5d51d12 314 Pfam PF13174 Tetratricopeptide repeat 71 106 7.6E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_02183 737a97d9932dbc1963fdf023d5d51d12 314 SUPERFAMILY SSF48452 38 106 9.48E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_02183 737a97d9932dbc1963fdf023d5d51d12 314 Gene3D G3DSA:1.25.40.10 29 109 2.1E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_02185 dbb00b55cd2de54955cf18b02ab50602 96 Pfam PF11839 Alanine-zipper, major outer membrane lipoprotein 32 96 1.4E-11 T 11-10-2018 IPR021793 Major outer membrane lipoprotein Oprl SYN_01059 74e7ee73ccc691a9556ca74e8a6afaac 280 PRINTS PR01374 Gram-negative bacterial tonB protein signature 200 221 1.6E-5 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SYN_01059 74e7ee73ccc691a9556ca74e8a6afaac 280 PRINTS PR01374 Gram-negative bacterial tonB protein signature 221 239 1.6E-5 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 SYN_01059 74e7ee73ccc691a9556ca74e8a6afaac 280 SUPERFAMILY SSF74653 186 278 9.03E-21 T 11-10-2018 SYN_01059 74e7ee73ccc691a9556ca74e8a6afaac 280 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 205 277 2.2E-19 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 SYN_01059 74e7ee73ccc691a9556ca74e8a6afaac 280 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 207 278 2.4E-20 T 11-10-2018 IPR006260 TonB/TolA, C-terminal SYN_01059 74e7ee73ccc691a9556ca74e8a6afaac 280 Gene3D G3DSA:3.30.1150.10 170 279 1.9E-23 T 11-10-2018 SYN_00387 e5969b5d28c74ff5592446ec9d712a2e 333 Pfam PF01384 Phosphate transporter family 22 321 2.0E-92 T 11-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 SYN_00339 675eb2593284e5d08f224db9efe2813d 391 Pfam PF03773 Predicted permease 33 383 3.9E-76 T 11-10-2018 IPR005524 Predicted permease DUF318 SYN_00659 9a7143f4aed8e01d584f70bc73e5d1c1 590 Gene3D G3DSA:3.30.450.20 85 209 4.5E-13 T 11-10-2018 SYN_00659 9a7143f4aed8e01d584f70bc73e5d1c1 590 Pfam PF02743 Cache domain 26 203 6.9E-17 T 11-10-2018 IPR033479 Double Cache domain 1 SYN_00249 bd5cc121b38368d6795929a6a05bb95c 340 Pfam PF16269 Domain of unknown function (DUF4922) 141 327 3.0E-56 T 11-10-2018 SYN_00249 bd5cc121b38368d6795929a6a05bb95c 340 SUPERFAMILY SSF54197 90 180 9.92E-5 T 11-10-2018 IPR036265 HIT-like superfamily SYN_02002 68011dfe8948e9c5b7b5a3542721477b 418 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 324 345 - T 11-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 SYN_02002 68011dfe8948e9c5b7b5a3542721477b 418 Pfam PF00171 Aldehyde dehydrogenase family 4 287 2.7E-18 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 SYN_02002 68011dfe8948e9c5b7b5a3542721477b 418 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 6 417 42.176 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 SYN_02002 68011dfe8948e9c5b7b5a3542721477b 418 Gene3D G3DSA:3.40.309.10 227 375 1.7E-167 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 SYN_02002 68011dfe8948e9c5b7b5a3542721477b 418 PIRSF PIRSF000151 1 418 1.1E-181 T 11-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 SYN_02002 68011dfe8948e9c5b7b5a3542721477b 418 Gene3D G3DSA:3.40.605.10 19 412 1.7E-167 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 SYN_02002 68011dfe8948e9c5b7b5a3542721477b 418 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 14 407 2.7E-153 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 SYN_02002 68011dfe8948e9c5b7b5a3542721477b 418 SUPERFAMILY SSF53720 5 417 9.29E-123 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 SYN_02249 ed4f929e7e31b57997e62e20a3119c3c 316 TIGRFAM TIGR02580 cas_RAMP_Cmr4: CRISPR type III-B/RAMP module RAMP protein Cmr4 27 307 1.5E-57 T 11-10-2018 IPR013410 CRISPR-associated RAMP Cmr4 SYN_02249 ed4f929e7e31b57997e62e20a3119c3c 316 Pfam PF03787 RAMP superfamily 27 306 2.1E-21 T 11-10-2018 IPR005537 CRISPR type III-associated RAMP protein SYN_02443 38528868892a16ba19177b6e0210bbea 217 Gene3D G3DSA:3.90.870.10 4 215 1.5E-72 T 11-10-2018 SYN_02443 38528868892a16ba19177b6e0210bbea 217 SUPERFAMILY SSF55821 7 209 8.55E-59 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily SYN_02443 38528868892a16ba19177b6e0210bbea 217 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 10 210 5.5E-62 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 SYN_02443 38528868892a16ba19177b6e0210bbea 217 Pfam PF01300 Telomere recombination 25 200 3.0E-53 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 SYN_01896 83ff94be1b456ea1bd528e72a49da697 315 Pfam PF13522 Glutamine amidotransferase domain 73 159 1.1E-6 T 11-10-2018 SYN_01896 83ff94be1b456ea1bd528e72a49da697 315 Gene3D G3DSA:3.60.20.10 2 225 5.0E-22 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal SYN_01896 83ff94be1b456ea1bd528e72a49da697 315 SUPERFAMILY SSF56235 2 199 1.46E-20 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal SYN_00522 9b336032c171598e3c4e18504907f907 290 SMART SM01211 20 286 1.0E-121 T 11-10-2018 SYN_00522 9b336032c171598e3c4e18504907f907 290 Gene3D G3DSA:3.40.50.880 2 287 1.7E-86 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like SYN_00522 9b336032c171598e3c4e18504907f907 290 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 21 285 8.8E-91 T 11-10-2018 SYN_00522 9b336032c171598e3c4e18504907f907 290 SUPERFAMILY SSF52317 19 286 1.22E-74 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like SYN_00647 2d723ad03caa4135a4cdeff30e76dae3 482 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 174 312 3.4E-43 T 11-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain SYN_00647 2d723ad03caa4135a4cdeff30e76dae3 482 SMART SM00881 26 120 6.6E-29 T 11-10-2018 IPR003781 CoA-binding GO:0048037 SYN_00647 2d723ad03caa4135a4cdeff30e76dae3 482 Pfam PF13380 CoA binding domain 31 154 6.5E-19 T 11-10-2018 IPR003781 CoA-binding GO:0048037 SYN_00647 2d723ad03caa4135a4cdeff30e76dae3 482 Gene3D G3DSA:3.40.50.720 23 150 7.1E-37 T 11-10-2018 SYN_00647 2d723ad03caa4135a4cdeff30e76dae3 482 SUPERFAMILY SSF51735 22 159 1.36E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_00647 2d723ad03caa4135a4cdeff30e76dae3 482 SUPERFAMILY SSF52210 153 312 3.01E-32 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_00647 2d723ad03caa4135a4cdeff30e76dae3 482 Gene3D G3DSA:3.40.50.261 152 314 4.3E-43 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_00647 2d723ad03caa4135a4cdeff30e76dae3 482 SUPERFAMILY SSF52210 319 474 1.57E-27 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_00647 2d723ad03caa4135a4cdeff30e76dae3 482 Gene3D G3DSA:3.40.50.261 317 480 1.0E-34 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_01349 519e2ef3a6dfb98981cbd1525729f306 258 Pfam PF01169 Uncharacterized protein family UPF0016 122 196 7.2E-23 T 11-10-2018 IPR001727 Gdt1 family SYN_01349 519e2ef3a6dfb98981cbd1525729f306 258 Pfam PF01169 Uncharacterized protein family UPF0016 25 99 4.7E-21 T 11-10-2018 IPR001727 Gdt1 family SYN_00602 ea4ed6dfc8588e2a0a75e3514815c212 186 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 42 95 1.4E-19 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00602 ea4ed6dfc8588e2a0a75e3514815c212 186 SMART SM00926 41 95 9.3E-21 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_00602 ea4ed6dfc8588e2a0a75e3514815c212 186 Gene3D G3DSA:3.40.50.740 98 186 1.2E-38 T 11-10-2018 SYN_00602 ea4ed6dfc8588e2a0a75e3514815c212 186 SUPERFAMILY SSF53706 36 186 1.16E-56 T 11-10-2018 SYN_00602 ea4ed6dfc8588e2a0a75e3514815c212 186 Gene3D G3DSA:2.20.25.90 39 97 7.2E-21 T 11-10-2018 SYN_00602 ea4ed6dfc8588e2a0a75e3514815c212 186 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 63 - T 11-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 SYN_02833 be874edc57b32e307461bbcda867fd3b 259 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 14 253 3.6E-58 T 11-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 SYN_02833 be874edc57b32e307461bbcda867fd3b 259 Pfam PF01311 Bacterial export proteins, family 1 13 246 6.5E-62 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SYN_02833 be874edc57b32e307461bbcda867fd3b 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 8.8E-22 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SYN_02833 be874edc57b32e307461bbcda867fd3b 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 20 41 8.8E-22 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SYN_02833 be874edc57b32e307461bbcda867fd3b 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 8.8E-22 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SYN_02833 be874edc57b32e307461bbcda867fd3b 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 8.8E-22 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 SYN_00429 baa5d2f59b3f75dc8adbbdcca8f12558 267 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 12 258 6.0E-22 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase SYN_00429 baa5d2f59b3f75dc8adbbdcca8f12558 267 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 10 265 2.6E-87 T 11-10-2018 SYN_00429 baa5d2f59b3f75dc8adbbdcca8f12558 267 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 35 44 - T 11-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 SYN_00429 baa5d2f59b3f75dc8adbbdcca8f12558 267 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 10 265 2.4E-80 T 11-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 SYN_00429 baa5d2f59b3f75dc8adbbdcca8f12558 267 Gene3D G3DSA:3.60.10.10 9 267 1.6E-72 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily SYN_00429 baa5d2f59b3f75dc8adbbdcca8f12558 267 SUPERFAMILY SSF56219 9 266 2.62E-71 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily SYN_01224 bac607cc39e2d686935956b83f02daab 232 Pfam PF04055 Radical SAM superfamily 53 220 6.0E-22 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_01224 bac607cc39e2d686935956b83f02daab 232 Gene3D G3DSA:3.20.20.70 43 228 4.4E-29 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_01224 bac607cc39e2d686935956b83f02daab 232 SUPERFAMILY SSF102114 49 222 7.98E-32 T 11-10-2018 SYN_01224 bac607cc39e2d686935956b83f02daab 232 Pfam PF13394 4Fe-4S single cluster domain 53 144 1.7E-7 T 11-10-2018 SYN_01224 bac607cc39e2d686935956b83f02daab 232 TIGRFAM TIGR04038 tatD_link_rSAM: radical SAM protein, TatD family-associated 42 232 1.9E-60 T 11-10-2018 IPR023821 Radical SAM, TatD-associated SYN_01932 b41778f0ffd30d75a8673a3f4a90080e 418 Gene3D G3DSA:2.120.10.30 64 416 2.3E-120 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like SYN_01932 b41778f0ffd30d75a8673a3f4a90080e 418 Pfam PF07995 Glucose / Sorbosone dehydrogenase 82 398 8.9E-98 T 11-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase SYN_01932 b41778f0ffd30d75a8673a3f4a90080e 418 SUPERFAMILY SSF50952 65 409 1.09E-38 T 11-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 SYN_00538 beb701480ea67abe4dd4625a02f2774f 513 Gene3D G3DSA:3.80.30.20 257 435 5.8E-12 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe SYN_00538 beb701480ea67abe4dd4625a02f2774f 513 Pfam PF04055 Radical SAM superfamily 259 417 2.3E-8 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_00538 beb701480ea67abe4dd4625a02f2774f 513 SUPERFAMILY SSF102114 235 421 1.11E-19 T 11-10-2018 SYN_00538 beb701480ea67abe4dd4625a02f2774f 513 SMART SM00729 254 462 1.5E-5 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SYN_02182 22a22a4c1105b0d6134db20867dd4e5d 242 Pfam PF06888 Putative Phosphatase 6 176 6.2E-14 T 11-10-2018 IPR016965 Phosphatase PHOSPHO-type GO:0016791 SYN_02182 22a22a4c1105b0d6134db20867dd4e5d 242 SUPERFAMILY SSF56784 1 214 2.86E-37 T 11-10-2018 IPR036412 HAD-like superfamily SYN_02182 22a22a4c1105b0d6134db20867dd4e5d 242 Gene3D G3DSA:3.90.1470.20 16 135 4.8E-57 T 11-10-2018 SYN_02182 22a22a4c1105b0d6134db20867dd4e5d 242 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 6 175 4.6E-22 T 11-10-2018 SYN_02182 22a22a4c1105b0d6134db20867dd4e5d 242 TIGRFAM TIGR01489 DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 5 184 1.3E-32 T 11-10-2018 IPR006384 Pyridoxal phosphate phosphatase-related GO:0016791 SYN_02182 22a22a4c1105b0d6134db20867dd4e5d 242 Gene3D G3DSA:3.40.50.1000 7 207 4.8E-57 T 11-10-2018 IPR023214 HAD superfamily SYN_02841 8613903ba0c5daa0f788d5230b21db58 584 Gene3D G3DSA:3.30.750.140 428 537 5.3E-14 T 11-10-2018 IPR038610 FliK-like, C-terminal domain superfamily SYN_02841 8613903ba0c5daa0f788d5230b21db58 584 Pfam PF02120 Flagellar hook-length control protein FliK 447 525 5.5E-18 T 11-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal SYN_00997 f2a96b93f4266be6e359f93a50ca04e9 161 Gene3D G3DSA:1.20.58.1290 63 159 4.3E-35 T 11-10-2018 SYN_00997 f2a96b93f4266be6e359f93a50ca04e9 161 SUPERFAMILY SSF141259 1 63 5.49E-14 T 11-10-2018 IPR036101 CarD-like/TRCF domain superfamily SYN_00997 f2a96b93f4266be6e359f93a50ca04e9 161 Pfam PF02559 CarD-like/TRCF domain 2 111 7.5E-19 T 11-10-2018 IPR003711 CarD-like/TRCF domain SYN_00997 f2a96b93f4266be6e359f93a50ca04e9 161 Gene3D G3DSA:2.30.30.840 1 62 1.1E-26 T 11-10-2018 SYN_00997 f2a96b93f4266be6e359f93a50ca04e9 161 SMART SM01058 1 112 9.5E-35 T 11-10-2018 IPR003711 CarD-like/TRCF domain SYN_02635 ae5967584f710631da9aeacf53fa97e5 656 Gene3D G3DSA:3.40.50.12780 63 525 8.8E-101 T 11-10-2018 SYN_02635 ae5967584f710631da9aeacf53fa97e5 656 Pfam PF13193 AMP-binding enzyme C-terminal domain 541 619 2.2E-23 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain SYN_02635 ae5967584f710631da9aeacf53fa97e5 656 SUPERFAMILY SSF56801 20 651 8.11E-173 T 11-10-2018 SYN_02635 ae5967584f710631da9aeacf53fa97e5 656 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 26 653 7.6E-291 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 SYN_02635 ae5967584f710631da9aeacf53fa97e5 656 Gene3D G3DSA:3.30.300.30 528 656 8.0E-29 T 11-10-2018 SYN_02635 ae5967584f710631da9aeacf53fa97e5 656 ProSitePatterns PS00455 Putative AMP-binding domain signature. 269 280 - T 11-10-2018 IPR020845 AMP-binding, conserved site SYN_02635 ae5967584f710631da9aeacf53fa97e5 656 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 29 89 3.0E-19 T 11-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 SYN_02635 ae5967584f710631da9aeacf53fa97e5 656 Pfam PF00501 AMP-binding enzyme 91 532 2.6E-90 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 SYN_02041 7a99fe777934e0c8cf4c0b72e0b3e1dc 250 Pfam PF14511 Type II restriction endonuclease EcoO109I 8 202 7.3E-91 T 11-10-2018 IPR032793 Type II restriction endonuclease EcoO109IR SYN_02041 7a99fe777934e0c8cf4c0b72e0b3e1dc 250 SUPERFAMILY SSF52980 6 241 6.43E-100 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 SYN_00119 1789e70f7e770702b5604d9a98b57821 105 SMART SM00990 1 97 8.9E-18 T 11-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 SYN_00119 1789e70f7e770702b5604d9a98b57821 105 Pfam PF08774 VRR-NUC domain 39 96 7.5E-7 T 11-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 SYN_00119 1789e70f7e770702b5604d9a98b57821 105 Gene3D G3DSA:3.40.1350.10 1 105 5.4E-16 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 SYN_00239 5170c70dcccad57f1862bdda9c49960e 482 Gene3D G3DSA:1.20.1600.10 49 481 5.3E-85 T 11-10-2018 SYN_00239 5170c70dcccad57f1862bdda9c49960e 482 SUPERFAMILY SSF56954 32 475 1.83E-83 T 11-10-2018 SYN_00239 5170c70dcccad57f1862bdda9c49960e 482 Pfam PF02321 Outer membrane efflux protein 290 472 3.0E-31 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SYN_00239 5170c70dcccad57f1862bdda9c49960e 482 Pfam PF02321 Outer membrane efflux protein 69 267 2.8E-25 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SYN_01400 4b7e9e1aa4558aaf32a8161a16f81b04 159 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 155 1.8E-61 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 SYN_01400 4b7e9e1aa4558aaf32a8161a16f81b04 159 SUPERFAMILY SSF69765 1 156 3.01E-60 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 SYN_01400 4b7e9e1aa4558aaf32a8161a16f81b04 159 Pfam PF02542 YgbB family 1 154 1.5E-60 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 SYN_01400 4b7e9e1aa4558aaf32a8161a16f81b04 159 Gene3D G3DSA:3.30.1330.50 1 159 3.9E-64 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 SYN_01400 4b7e9e1aa4558aaf32a8161a16f81b04 159 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 11-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 SYN_01400 4b7e9e1aa4558aaf32a8161a16f81b04 159 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 33.929 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 SYN_02265 d841c96b7fdc6f2a6c96bd81e84bfa53 157 Gene3D G3DSA:1.10.10.10 1 52 8.3E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_02265 d841c96b7fdc6f2a6c96bd81e84bfa53 157 SMART SM00344 1 101 7.2E-4 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 SYN_02265 d841c96b7fdc6f2a6c96bd81e84bfa53 157 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site SYN_02265 d841c96b7fdc6f2a6c96bd81e84bfa53 157 Gene3D G3DSA:3.30.70.3460 64 157 1.5E-22 T 11-10-2018 SYN_02265 d841c96b7fdc6f2a6c96bd81e84bfa53 157 Pfam PF13404 AsnC-type helix-turn-helix domain 1 45 1.2E-10 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 SYN_02265 d841c96b7fdc6f2a6c96bd81e84bfa53 157 SUPERFAMILY SSF46785 1 64 3.42E-9 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_00606 93dad7d5da09b23839c8524f711be437 471 TIGRFAM TIGR01316 gltA: glutamate synthase (NADPH), homotetrameric 23 468 1.3E-181 T 11-10-2018 IPR006004 Glutamate synthase (NADPH), homotetrameric KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 SYN_00606 93dad7d5da09b23839c8524f711be437 471 PRINTS PR00419 Adrenodoxin reductase family signature 173 186 1.1E-17 T 11-10-2018 SYN_00606 93dad7d5da09b23839c8524f711be437 471 PRINTS PR00419 Adrenodoxin reductase family signature 291 305 1.1E-17 T 11-10-2018 SYN_00606 93dad7d5da09b23839c8524f711be437 471 PRINTS PR00419 Adrenodoxin reductase family signature 150 172 1.1E-17 T 11-10-2018 SYN_00606 93dad7d5da09b23839c8524f711be437 471 PRINTS PR00419 Adrenodoxin reductase family signature 325 338 1.1E-17 T 11-10-2018 SYN_00606 93dad7d5da09b23839c8524f711be437 471 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 149 456 2.0E-34 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SYN_00606 93dad7d5da09b23839c8524f711be437 471 SUPERFAMILY SSF51971 147 401 1.88E-69 T 11-10-2018 SYN_00606 93dad7d5da09b23839c8524f711be437 471 Gene3D G3DSA:1.10.1060.10 2 148 3.4E-41 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SYN_00606 93dad7d5da09b23839c8524f711be437 471 Gene3D G3DSA:3.50.50.60 286 471 7.2E-30 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_00606 93dad7d5da09b23839c8524f711be437 471 Gene3D G3DSA:3.50.50.60 149 275 1.4E-37 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_00606 93dad7d5da09b23839c8524f711be437 471 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 26 136 2.8E-42 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 SYN_00606 93dad7d5da09b23839c8524f711be437 471 SUPERFAMILY SSF46548 13 159 5.75E-37 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SYN_02245 5acdb3304a54340fc9c4e7ea0c198296 412 Pfam PF09670 CRISPR-associated protein (Cas_Cas02710) 14 400 2.3E-145 T 11-10-2018 SYN_02245 5acdb3304a54340fc9c4e7ea0c198296 412 TIGRFAM TIGR02710 TIGR02710: CRISPR-associated protein, TIGR02710 family 14 397 3.8E-57 T 11-10-2018 IPR014082 CRISPR-associated protein, Cas02710 SYN_00081 023a26ba037f0579cc4025d9f5ff07e1 295 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 45 289 1.1E-101 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 SYN_00081 023a26ba037f0579cc4025d9f5ff07e1 295 SUPERFAMILY SSF52540 38 274 1.06E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00081 023a26ba037f0579cc4025d9f5ff07e1 295 ProSitePatterns PS01215 Mrp family signature. 154 170 - T 11-10-2018 IPR000808 Mrp, conserved site GO:0005524 SYN_00081 023a26ba037f0579cc4025d9f5ff07e1 295 Gene3D G3DSA:3.40.50.300 31 289 3.4E-90 T 11-10-2018 SYN_00081 023a26ba037f0579cc4025d9f5ff07e1 295 Hamap MF_02040 Iron-sulfur cluster carrier protein. 40 292 37.603 T 11-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein SYN_00923 9abb4d5e9ff07901cabf4684f1efcfcb 425 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 3 425 6.8E-131 T 11-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 SYN_00923 9abb4d5e9ff07901cabf4684f1efcfcb 425 Pfam PF12704 MacB-like periplasmic core domain 25 254 2.6E-15 T 11-10-2018 IPR025857 MacB-like periplasmic core domain SYN_00923 9abb4d5e9ff07901cabf4684f1efcfcb 425 Pfam PF02687 FtsX-like permease family 311 418 6.1E-15 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 SYN_01373 ed1789204f810670c745690c6ebc0f0f 385 Gene3D G3DSA:3.40.50.2300 1 139 1.7E-35 T 11-10-2018 SYN_01373 ed1789204f810670c745690c6ebc0f0f 385 Pfam PF00072 Response regulator receiver domain 4 114 4.4E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_01373 ed1789204f810670c745690c6ebc0f0f 385 SUPERFAMILY SSF52172 2 130 2.13E-30 T 11-10-2018 IPR011006 CheY-like superfamily SYN_01373 ed1789204f810670c745690c6ebc0f0f 385 SMART SM00448 2 114 4.3E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_01373 ed1789204f810670c745690c6ebc0f0f 385 Gene3D G3DSA:1.10.3210.10 140 310 1.9E-11 T 11-10-2018 SYN_00109 0c734f41249fc2413b50c44ee2638af3 208 SUPERFAMILY SSF53335 48 179 1.96E-18 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_00109 0c734f41249fc2413b50c44ee2638af3 208 Gene3D G3DSA:3.40.50.150 42 195 3.8E-32 T 11-10-2018 SYN_00109 0c734f41249fc2413b50c44ee2638af3 208 Pfam PF02353 Mycolic acid cyclopropane synthetase 53 95 2.1E-5 T 11-10-2018 SYN_02813 3c474f5a13d44118a977a47c8f0900b1 215 SUPERFAMILY SSF140566 53 186 5.49E-14 T 11-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 SYN_02813 3c474f5a13d44118a977a47c8f0900b1 215 Pfam PF05130 FlgN protein 53 201 1.1E-25 T 11-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 SYN_02813 3c474f5a13d44118a977a47c8f0900b1 215 Gene3D G3DSA:1.20.58.300 53 185 5.1E-8 T 11-10-2018 SYN_01784 d8129d80a4f8ec74c5759e3f4b562543 317 Gene3D G3DSA:3.10.310.30 198 316 2.6E-34 T 11-10-2018 SYN_01784 d8129d80a4f8ec74c5759e3f4b562543 317 Gene3D G3DSA:3.90.1640.10 1 195 4.4E-58 T 11-10-2018 SYN_01784 d8129d80a4f8ec74c5759e3f4b562543 317 Pfam PF02272 DHHA1 domain 252 310 2.3E-8 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 SYN_01784 d8129d80a4f8ec74c5759e3f4b562543 317 Pfam PF01368 DHH family 15 154 2.7E-11 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 SYN_01784 d8129d80a4f8ec74c5759e3f4b562543 317 SUPERFAMILY SSF64182 14 303 3.14E-58 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily SYN_03316 e1797504dec3b8978990956ce2172c46 133 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 133 31.459 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_03316 e1797504dec3b8978990956ce2172c46 133 Gene3D G3DSA:3.30.1370.30 3 74 1.9E-25 T 11-10-2018 SYN_03316 e1797504dec3b8978990956ce2172c46 133 Gene3D G3DSA:3.30.1490.10 76 133 1.1E-28 T 11-10-2018 SYN_03316 e1797504dec3b8978990956ce2172c46 133 ProSitePatterns PS00053 Ribosomal protein S8 signature. 103 120 - T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_03316 e1797504dec3b8978990956ce2172c46 133 SUPERFAMILY SSF56047 3 133 1.57E-45 T 11-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_03316 e1797504dec3b8978990956ce2172c46 133 Pfam PF00410 Ribosomal protein S8 5 133 3.6E-50 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_03141 8a8bcf1832ccdc0060ac22f4d4153d55 364 Gene3D G3DSA:1.10.4030.30 85 324 2.8E-56 T 11-10-2018 SYN_03141 8a8bcf1832ccdc0060ac22f4d4153d55 364 SUPERFAMILY SSF109998 68 245 4.12E-25 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily SYN_03141 8a8bcf1832ccdc0060ac22f4d4153d55 364 Pfam PF13624 SurA N-terminal domain 66 186 2.4E-12 T 11-10-2018 SYN_03141 8a8bcf1832ccdc0060ac22f4d4153d55 364 SUPERFAMILY SSF54534 208 316 5.23E-32 T 11-10-2018 SYN_03141 8a8bcf1832ccdc0060ac22f4d4153d55 364 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 256 276 - T 11-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 SYN_03141 8a8bcf1832ccdc0060ac22f4d4153d55 364 Gene3D G3DSA:3.10.50.40 216 318 2.8E-56 T 11-10-2018 SYN_03141 8a8bcf1832ccdc0060ac22f4d4153d55 364 Pfam PF13616 PPIC-type PPIASE domain 207 317 1.3E-28 T 11-10-2018 SYN_02916 a6d12a46fb5f2da26090314e4dea601c 179 Pfam PF02926 THUMP domain 46 161 1.3E-5 T 11-10-2018 IPR004114 THUMP domain GO:0003723 SYN_02916 a6d12a46fb5f2da26090314e4dea601c 179 SUPERFAMILY SSF143437 79 164 4.36E-8 T 11-10-2018 SYN_02916 a6d12a46fb5f2da26090314e4dea601c 179 SMART SM00981 67 166 2.0E-7 T 11-10-2018 IPR004114 THUMP domain GO:0003723 SYN_01265 30d1acef5c131f6dfb0f4408e49b2cf1 198 Gene3D G3DSA:1.10.10.640 68 190 1.3E-41 T 11-10-2018 SYN_01265 30d1acef5c131f6dfb0f4408e49b2cf1 198 Pfam PF05494 MlaC protein 32 192 1.2E-43 T 11-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC SYN_01265 30d1acef5c131f6dfb0f4408e49b2cf1 198 PIRSF PIRSF004649 1 198 4.1E-57 T 11-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC SYN_01265 30d1acef5c131f6dfb0f4408e49b2cf1 198 Gene3D G3DSA:3.10.450.50 32 165 1.3E-41 T 11-10-2018 SYN_00447 cbb63fbd94fac377898a9237765f0aa5 202 Pfam PF04306 Protein of unknown function (DUF456) 64 198 9.6E-36 T 11-10-2018 IPR007403 Protein of unknown function DUF456 SYN_01903 e7d17cfeca832468821592ceed6ad9ce 319 SUPERFAMILY SSF75005 8 309 2.22E-90 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily SYN_01903 e7d17cfeca832468821592ceed6ad9ce 319 PIRSF PIRSF016202 1 314 9.9E-115 T 11-10-2018 IPR007184 Mannoside phosphorylase SYN_01903 e7d17cfeca832468821592ceed6ad9ce 319 Pfam PF04041 beta-1,4-mannooligosaccharide phosphorylase 23 312 4.3E-57 T 11-10-2018 IPR007184 Mannoside phosphorylase SYN_01903 e7d17cfeca832468821592ceed6ad9ce 319 Gene3D G3DSA:2.115.10.20 1 314 2.7E-108 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily SYN_00851 f1d9963832d3df2f009df36d1e6547c3 503 Pfam PF02321 Outer membrane efflux protein 79 264 8.9E-32 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SYN_00851 f1d9963832d3df2f009df36d1e6547c3 503 Pfam PF02321 Outer membrane efflux protein 295 474 5.7E-21 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SYN_00851 f1d9963832d3df2f009df36d1e6547c3 503 SUPERFAMILY SSF56954 19 478 1.96E-109 T 11-10-2018 SYN_00851 f1d9963832d3df2f009df36d1e6547c3 503 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 22 476 7.1E-116 T 11-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 SYN_00851 f1d9963832d3df2f009df36d1e6547c3 503 Gene3D G3DSA:2.20.200.10 115 365 4.9E-140 T 11-10-2018 SYN_00851 f1d9963832d3df2f009df36d1e6547c3 503 Gene3D G3DSA:1.20.1600.10 68 477 4.9E-140 T 11-10-2018 SYN_00168 3c6d7cc23d05e885a2998d6bcf7cd73e 388 Gene3D G3DSA:3.40.640.10 42 285 3.9E-122 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SYN_00168 3c6d7cc23d05e885a2998d6bcf7cd73e 388 TIGRFAM TIGR03540 DapC_direct: LL-diaminopimelate aminotransferase 2 385 2.3E-186 T 11-10-2018 IPR019881 Diaminopimelate aminotransferase, DapL, Desulfovibrio-type GO:0009089|GO:0010285 KEGG: 00300+2.6.1.83|MetaCyc: PWY-5097 SYN_00168 3c6d7cc23d05e885a2998d6bcf7cd73e 388 SUPERFAMILY SSF53383 3 386 8.11E-104 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SYN_00168 3c6d7cc23d05e885a2998d6bcf7cd73e 388 Gene3D G3DSA:3.90.1150.10 20 383 3.9E-122 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SYN_00168 3c6d7cc23d05e885a2998d6bcf7cd73e 388 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 237 250 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 SYN_00168 3c6d7cc23d05e885a2998d6bcf7cd73e 388 Pfam PF00155 Aminotransferase class I and II 31 383 1.7E-50 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SYN_00035 b49a0d51cf1a5fdb76fac455af80a396 291 SUPERFAMILY SSF103481 39 139 6.54E-14 T 11-10-2018 SYN_00035 b49a0d51cf1a5fdb76fac455af80a396 291 Pfam PF00892 EamA-like transporter family 155 287 2.0E-6 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SYN_00035 b49a0d51cf1a5fdb76fac455af80a396 291 Pfam PF00892 EamA-like transporter family 7 135 1.1E-9 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SYN_01483 fcd0a87ae5501984bcc76bf1a07b73ee 352 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 6 341 1.2E-81 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SYN_01483 fcd0a87ae5501984bcc76bf1a07b73ee 352 SUPERFAMILY SSF52440 4 126 1.06E-31 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily SYN_01483 fcd0a87ae5501984bcc76bf1a07b73ee 352 SUPERFAMILY SSF56059 127 328 2.47E-42 T 11-10-2018 SYN_01483 fcd0a87ae5501984bcc76bf1a07b73ee 352 Gene3D G3DSA:3.30.470.20 116 342 3.6E-61 T 11-10-2018 SYN_01483 fcd0a87ae5501984bcc76bf1a07b73ee 352 Gene3D G3DSA:3.40.50.20 2 115 5.9E-27 T 11-10-2018 SYN_01483 fcd0a87ae5501984bcc76bf1a07b73ee 352 Pfam PF01820 D-ala D-ala ligase N-terminus 6 116 1.2E-25 T 11-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SYN_01483 fcd0a87ae5501984bcc76bf1a07b73ee 352 Pfam PF07478 D-ala D-ala ligase C-terminus 135 339 4.4E-45 T 11-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SYN_01483 fcd0a87ae5501984bcc76bf1a07b73ee 352 PIRSF PIRSF039102 2 350 1.2E-92 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SYN_01483 fcd0a87ae5501984bcc76bf1a07b73ee 352 Gene3D G3DSA:3.30.1490.20 142 214 3.6E-61 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 SYN_01483 fcd0a87ae5501984bcc76bf1a07b73ee 352 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 5 342 32.816 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 SYN_01253 9c8540989fa85dd9485bdeb8d4f2a0de 325 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 308 1.3E-65 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme SYN_01253 9c8540989fa85dd9485bdeb8d4f2a0de 325 Gene3D G3DSA:3.40.50.1100 52 154 1.5E-120 T 11-10-2018 SYN_01253 9c8540989fa85dd9485bdeb8d4f2a0de 325 TIGRFAM TIGR01139 cysK: cysteine synthase A 15 320 3.9E-137 T 11-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 SYN_01253 9c8540989fa85dd9485bdeb8d4f2a0de 325 Gene3D G3DSA:3.40.50.1100 18 315 1.5E-120 T 11-10-2018 SYN_01253 9c8540989fa85dd9485bdeb8d4f2a0de 325 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 40 58 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 SYN_01253 9c8540989fa85dd9485bdeb8d4f2a0de 325 SUPERFAMILY SSF53686 9 320 1.96E-96 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme SYN_01253 9c8540989fa85dd9485bdeb8d4f2a0de 325 TIGRFAM TIGR01136 cysKM: cysteine synthase 15 320 2.0E-131 T 11-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 SYN_00409 c5e02472299830c39b93e9fd9958fff1 493 Pfam PF02470 MlaD protein 38 113 2.0E-19 T 11-10-2018 IPR003399 Mce/MlaD SYN_00679 9e51e20cf1885b234f1a6bc8861ae647 474 SUPERFAMILY SSF53474 54 348 1.29E-54 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold SYN_00679 9e51e20cf1885b234f1a6bc8861ae647 474 Gene3D G3DSA:3.40.50.1820 54 352 1.2E-63 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold SYN_00679 9e51e20cf1885b234f1a6bc8861ae647 474 Pfam PF07859 alpha/beta hydrolase fold 87 324 3.1E-27 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 SYN_00422 35b2ca7e52db99176f9a35c2896479fd 157 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 6 147 3.6E-36 T 11-10-2018 IPR018639 Domain of unknown function DUF2062 SYN_00311 12f83a6f208d77acee293d972ac36578 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 180 3.1E-25 T 11-10-2018 SYN_00311 12f83a6f208d77acee293d972ac36578 218 Gene3D G3DSA:3.40.50.1000 9 201 2.0E-33 T 11-10-2018 IPR023214 HAD superfamily SYN_00311 12f83a6f208d77acee293d972ac36578 218 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 88 174 3.3E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 SYN_00311 12f83a6f208d77acee293d972ac36578 218 Gene3D G3DSA:1.10.150.240 20 83 2.0E-33 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 SYN_00311 12f83a6f208d77acee293d972ac36578 218 SUPERFAMILY SSF56784 7 209 2.98E-36 T 11-10-2018 IPR036412 HAD-like superfamily SYN_03522 4bef99be35548aba9675ae7f24d88605 715 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 136 711 6.3E-201 T 11-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 SYN_03522 4bef99be35548aba9675ae7f24d88605 715 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 135 709 6.1E-175 T 11-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 SYN_03522 4bef99be35548aba9675ae7f24d88605 715 SUPERFAMILY SSF51998 137 695 3.02E-166 T 11-10-2018 SYN_03522 4bef99be35548aba9675ae7f24d88605 715 Pfam PF03477 ATP cone domain 22 109 1.8E-19 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 SYN_03522 4bef99be35548aba9675ae7f24d88605 715 Gene3D G3DSA:3.20.70.20 145 693 3.6E-123 T 11-10-2018 SYN_02250 b8d7e7bc54a10eb5351cea4cb25a4058 327 Gene3D G3DSA:3.30.70.2940 14 127 3.5E-8 T 11-10-2018 SYN_02250 b8d7e7bc54a10eb5351cea4cb25a4058 327 Pfam PF09700 CRISPR-associated protein (Cas_Cmr3) 16 254 7.6E-26 T 11-10-2018 IPR019117 CRISPR-associated protein, Cmr3 SYN_03077 4b062349a79f5a3be90adda09fa388f1 159 PIRSF PIRSF019083 3 158 1.4E-41 T 11-10-2018 IPR016747 Phosphotransbutyrylase SYN_03077 4b062349a79f5a3be90adda09fa388f1 159 Pfam PF04892 VanZ like family 13 139 2.0E-13 T 11-10-2018 IPR006976 VanZ-like SYN_02630 934b57605e8bb76f2dddc9fd932b31d5 636 PIRSF PIRSF003059 51 633 8.0E-157 T 11-10-2018 IPR016377 Sucrose/Glucosylglycerate phosphorylase-related SYN_02630 934b57605e8bb76f2dddc9fd932b31d5 636 Gene3D G3DSA:3.20.20.80 106 519 5.9E-146 T 11-10-2018 SYN_02630 934b57605e8bb76f2dddc9fd932b31d5 636 Gene3D G3DSA:2.60.40.1180 552 633 1.8E-5 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta SYN_02630 934b57605e8bb76f2dddc9fd932b31d5 636 SUPERFAMILY SSF51445 101 595 4.8E-74 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily SYN_02630 934b57605e8bb76f2dddc9fd932b31d5 636 Pfam PF16657 Maltogenic Amylase, C-terminal domain 560 630 8.9E-7 T 11-10-2018 IPR032091 Maltogenic Amylase, C-terminal SYN_02630 934b57605e8bb76f2dddc9fd932b31d5 636 Pfam PF00128 Alpha amylase, catalytic domain 136 357 8.1E-16 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SYN_02630 934b57605e8bb76f2dddc9fd932b31d5 636 SMART SM00642 121 518 1.9E-6 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SYN_02630 934b57605e8bb76f2dddc9fd932b31d5 636 Gene3D G3DSA:3.90.400.10 188 266 5.9E-146 T 11-10-2018 SYN_00924 96b34558363bdb2a015927f2c60e0d0d 542 SUPERFAMILY SSF50249 47 189 3.43E-37 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_00924 96b34558363bdb2a015927f2c60e0d0d 542 Gene3D G3DSA:2.40.50.140 42 190 5.3E-39 T 11-10-2018 SYN_00924 96b34558363bdb2a015927f2c60e0d0d 542 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 51 536 7.7E-201 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 SYN_00924 96b34558363bdb2a015927f2c60e0d0d 542 PIRSF PIRSF039101 11 542 8.6E-194 T 11-10-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 SYN_00924 96b34558363bdb2a015927f2c60e0d0d 542 Pfam PF01336 OB-fold nucleic acid binding domain 104 179 5.3E-14 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SYN_00924 96b34558363bdb2a015927f2c60e0d0d 542 Gene3D G3DSA:3.30.930.10 191 534 7.0E-131 T 11-10-2018 SYN_00924 96b34558363bdb2a015927f2c60e0d0d 542 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 55 537 43.76 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 SYN_00924 96b34558363bdb2a015927f2c60e0d0d 542 PRINTS PR00982 Lysyl-tRNA synthetase signature 249 265 1.9E-35 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 SYN_00924 96b34558363bdb2a015927f2c60e0d0d 542 PRINTS PR00982 Lysyl-tRNA synthetase signature 296 313 1.9E-35 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 SYN_00924 96b34558363bdb2a015927f2c60e0d0d 542 PRINTS PR00982 Lysyl-tRNA synthetase signature 233 243 1.9E-35 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 SYN_00924 96b34558363bdb2a015927f2c60e0d0d 542 PRINTS PR00982 Lysyl-tRNA synthetase signature 419 435 1.9E-35 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 SYN_00924 96b34558363bdb2a015927f2c60e0d0d 542 PRINTS PR00982 Lysyl-tRNA synthetase signature 278 291 1.9E-35 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 SYN_00924 96b34558363bdb2a015927f2c60e0d0d 542 Pfam PF00152 tRNA synthetases class II (D, K and N) 197 534 4.2E-82 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_00924 96b34558363bdb2a015927f2c60e0d0d 542 SUPERFAMILY SSF55681 196 535 2.49E-120 T 11-10-2018 SYN_01007 dff9cf8736d882d3c06d72fed0e3661e 426 PIRSF PIRSF033563 14 426 1.0E-142 T 11-10-2018 IPR008323 Uncharacterised conserved protein UCP033563 SYN_01007 dff9cf8736d882d3c06d72fed0e3661e 426 Pfam PF06245 Protein of unknown function (DUF1015) 17 423 6.8E-136 T 11-10-2018 IPR008323 Uncharacterised conserved protein UCP033563 SYN_00653 8eb78dc2f7c089a944bf8314facb95fc 307 SUPERFAMILY SSF53659 14 257 2.38E-25 T 11-10-2018 SYN_00653 8eb78dc2f7c089a944bf8314facb95fc 307 Gene3D G3DSA:3.40.718.10 3 301 4.6E-37 T 11-10-2018 SYN_00653 8eb78dc2f7c089a944bf8314facb95fc 307 Pfam PF01515 Phosphate acetyl/butaryl transferase 82 178 8.3E-9 T 11-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 SYN_03230 24b4ba7d26d11f017fa5b87a22228d68 453 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 65 242 9.0E-48 T 11-10-2018 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 SYN_03230 24b4ba7d26d11f017fa5b87a22228d68 453 Gene3D G3DSA:3.30.2010.10 241 322 3.2E-30 T 11-10-2018 SYN_03230 24b4ba7d26d11f017fa5b87a22228d68 453 Pfam PF01435 Peptidase family M48 246 450 4.5E-39 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SYN_00378 43fb6fe0f2f9c7f59589c56c428bcf58 223 SUPERFAMILY SSF53448 9 211 1.69E-34 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_00378 43fb6fe0f2f9c7f59589c56c428bcf58 223 Gene3D G3DSA:3.90.550.10 2 221 2.1E-71 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_00378 43fb6fe0f2f9c7f59589c56c428bcf58 223 Pfam PF09837 Uncharacterized protein conserved in bacteria (DUF2064) 51 162 7.6E-33 T 11-10-2018 IPR018641 Transferase 1, rSAM/selenodomain-associated SYN_00378 43fb6fe0f2f9c7f59589c56c428bcf58 223 TIGRFAM TIGR04282 glyco_like_cofC: transferase 1, rSAM/selenodomain-associated 6 195 3.4E-56 T 11-10-2018 IPR018641 Transferase 1, rSAM/selenodomain-associated SYN_02999 d1ce68adc633747db09978545688eb47 139 Pfam PF01894 Uncharacterised protein family UPF0047 20 136 4.8E-36 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 SYN_02999 d1ce68adc633747db09978545688eb47 139 SUPERFAMILY SSF111038 1 139 3.92E-46 T 11-10-2018 IPR035917 YjbQ-like superfamily SYN_02999 d1ce68adc633747db09978545688eb47 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 15 139 1.1E-32 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 SYN_02999 d1ce68adc633747db09978545688eb47 139 Gene3D G3DSA:2.60.120.460 1 139 7.1E-51 T 11-10-2018 IPR035917 YjbQ-like superfamily SYN_02999 d1ce68adc633747db09978545688eb47 139 PIRSF PIRSF004681 1 139 1.3E-41 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 SYN_02689 5dcf0b3bfb2d51e92b67f3da68b22773 644 SUPERFAMILY SSF51735 305 571 2.67E-61 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_02689 5dcf0b3bfb2d51e92b67f3da68b22773 644 Pfam PF02719 Polysaccharide biosynthesis protein 306 593 8.0E-116 T 11-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain SYN_02689 5dcf0b3bfb2d51e92b67f3da68b22773 644 Gene3D G3DSA:3.40.50.720 161 287 6.7E-32 T 11-10-2018 SYN_02689 5dcf0b3bfb2d51e92b67f3da68b22773 644 SUPERFAMILY SSF51735 163 293 3.19E-14 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_02689 5dcf0b3bfb2d51e92b67f3da68b22773 644 Pfam PF13727 CoA-binding domain 91 256 5.2E-12 T 11-10-2018 SYN_02689 5dcf0b3bfb2d51e92b67f3da68b22773 644 Gene3D G3DSA:3.40.50.720 302 628 1.3E-117 T 11-10-2018 SYN_00892 25caed86c689f33c63eb83df16145df0 138 PIRSF PIRSF003230 1 136 2.5E-47 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 SYN_00892 25caed86c689f33c63eb83df16145df0 138 SUPERFAMILY SSF54637 6 131 6.4E-36 T 11-10-2018 IPR029069 HotDog domain superfamily SYN_00892 25caed86c689f33c63eb83df16145df0 138 Gene3D G3DSA:3.10.129.10 3 134 8.1E-37 T 11-10-2018 SYN_00892 25caed86c689f33c63eb83df16145df0 138 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 9 26 - T 11-10-2018 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 SYN_00892 25caed86c689f33c63eb83df16145df0 138 Pfam PF03061 Thioesterase superfamily 18 101 2.0E-11 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 SYN_00892 25caed86c689f33c63eb83df16145df0 138 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 7 122 4.1E-27 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 SYN_01764 0edefd8f9ad2a3e31a5302023c0c7c19 179 Pfam PF05991 YacP-like NYN domain 3 177 1.8E-43 T 11-10-2018 IPR010298 Protein of unknown function DUF901 SYN_00509 3355fa31385c427f1ceaad4a681a9704 543 Pfam PF13408 Recombinase zinc beta ribbon domain 300 353 1.2E-6 T 11-10-2018 IPR025827 Recombinase zinc beta ribbon domain SYN_00509 3355fa31385c427f1ceaad4a681a9704 543 ProSitePatterns PS00397 Site-specific recombinases active site. 21 29 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 SYN_00509 3355fa31385c427f1ceaad4a681a9704 543 Gene3D G3DSA:3.40.50.1390 13 167 1.5E-37 T 11-10-2018 SYN_00509 3355fa31385c427f1ceaad4a681a9704 543 SUPERFAMILY SSF53041 16 165 2.49E-31 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 SYN_00509 3355fa31385c427f1ceaad4a681a9704 543 Pfam PF00239 Resolvase, N terminal domain 19 164 3.1E-32 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SYN_00509 3355fa31385c427f1ceaad4a681a9704 543 SMART SM00857 18 166 3.6E-45 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SYN_02816 d077fa9f9e1003f6518e83b3070793d0 403 Hamap MF_00416 Flagellar P-ring protein [flgI]. 20 403 35.2 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SYN_02816 d077fa9f9e1003f6518e83b3070793d0 403 Pfam PF02119 Flagellar P-ring protein 40 402 1.9E-130 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SYN_02816 d077fa9f9e1003f6518e83b3070793d0 403 PRINTS PR01010 Flagellar P-ring protein signature 74 89 6.7E-76 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SYN_02816 d077fa9f9e1003f6518e83b3070793d0 403 PRINTS PR01010 Flagellar P-ring protein signature 269 281 6.7E-76 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SYN_02816 d077fa9f9e1003f6518e83b3070793d0 403 PRINTS PR01010 Flagellar P-ring protein signature 55 70 6.7E-76 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SYN_02816 d077fa9f9e1003f6518e83b3070793d0 403 PRINTS PR01010 Flagellar P-ring protein signature 204 222 6.7E-76 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SYN_02816 d077fa9f9e1003f6518e83b3070793d0 403 PRINTS PR01010 Flagellar P-ring protein signature 178 196 6.7E-76 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SYN_02816 d077fa9f9e1003f6518e83b3070793d0 403 PRINTS PR01010 Flagellar P-ring protein signature 138 156 6.7E-76 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SYN_02816 d077fa9f9e1003f6518e83b3070793d0 403 PRINTS PR01010 Flagellar P-ring protein signature 40 55 6.7E-76 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SYN_02816 d077fa9f9e1003f6518e83b3070793d0 403 PRINTS PR01010 Flagellar P-ring protein signature 99 118 6.7E-76 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SYN_02816 d077fa9f9e1003f6518e83b3070793d0 403 PRINTS PR01010 Flagellar P-ring protein signature 121 138 6.7E-76 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 SYN_03155 4137f8e37e948e434325f01546c9028d 125 Pfam PF01063 Amino-transferase class IV 2 79 7.3E-16 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 SYN_03155 4137f8e37e948e434325f01546c9028d 125 Gene3D G3DSA:3.20.10.10 1 124 1.3E-43 T 11-10-2018 SYN_03155 4137f8e37e948e434325f01546c9028d 125 SUPERFAMILY SSF56752 1 120 3.01E-42 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 SYN_01071 8d9afe16af2a72ce85a8fdbccf60abbb 391 SUPERFAMILY SSF53383 3 383 2.96E-104 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SYN_01071 8d9afe16af2a72ce85a8fdbccf60abbb 391 PIRSF PIRSF005572 4 390 8.2E-62 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 SYN_01071 8d9afe16af2a72ce85a8fdbccf60abbb 391 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 195 215 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SYN_01071 8d9afe16af2a72ce85a8fdbccf60abbb 391 Gene3D G3DSA:3.90.1150.10 7 377 5.9E-122 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SYN_01071 8d9afe16af2a72ce85a8fdbccf60abbb 391 Pfam PF00266 Aminotransferase class-V 7 374 3.4E-98 T 11-10-2018 IPR000192 Aminotransferase class V domain SYN_01071 8d9afe16af2a72ce85a8fdbccf60abbb 391 Gene3D G3DSA:3.40.640.10 21 273 5.9E-122 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SYN_01071 8d9afe16af2a72ce85a8fdbccf60abbb 391 TIGRFAM TIGR01977 am_tr_V_EF2568: cysteine desulfurase family protein 7 382 2.9E-138 T 11-10-2018 IPR010969 Cysteine desulfurase-related, unknown function SYN_03220 84a81411f448b5f923b52952bcec68ab 41 Gene3D G3DSA:3.20.20.70 1 40 5.2E-9 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_03220 84a81411f448b5f923b52952bcec68ab 41 SUPERFAMILY SSF51569 1 37 7.57E-9 T 11-10-2018 SYN_01713 8933884f632cf4cff6b74fee96df1066 557 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 169 6.1E-53 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SYN_01713 8933884f632cf4cff6b74fee96df1066 557 Gene3D G3DSA:3.40.50.1220 185 349 1.4E-45 T 11-10-2018 SYN_01713 8933884f632cf4cff6b74fee96df1066 557 SUPERFAMILY SSF52518 3 176 1.8E-58 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold SYN_01713 8933884f632cf4cff6b74fee96df1066 557 Gene3D G3DSA:3.40.50.970 1 179 1.5E-66 T 11-10-2018 SYN_01713 8933884f632cf4cff6b74fee96df1066 557 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 382 530 1.9E-45 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SYN_01713 8933884f632cf4cff6b74fee96df1066 557 Gene3D G3DSA:3.40.50.970 361 555 2.1E-60 T 11-10-2018 SYN_01713 8933884f632cf4cff6b74fee96df1066 557 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 419 438 - T 11-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 SYN_01713 8933884f632cf4cff6b74fee96df1066 557 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 327 2.5E-34 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 SYN_01713 8933884f632cf4cff6b74fee96df1066 557 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 5 553 1.6E-191 T 11-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 SYN_01713 8933884f632cf4cff6b74fee96df1066 557 SUPERFAMILY SSF52518 364 552 3.82E-61 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold SYN_01713 8933884f632cf4cff6b74fee96df1066 557 SUPERFAMILY SSF52467 188 349 3.48E-45 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily SYN_00971 22c253b14aa75f1283ae683b5b92dfac 648 Gene3D G3DSA:1.10.287.950 314 577 1.4E-66 T 11-10-2018 SYN_00971 22c253b14aa75f1283ae683b5b92dfac 648 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 457 486 4.2E-42 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 SYN_00971 22c253b14aa75f1283ae683b5b92dfac 648 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 505 534 4.2E-42 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 SYN_00971 22c253b14aa75f1283ae683b5b92dfac 648 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 428 455 4.2E-42 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 SYN_00971 22c253b14aa75f1283ae683b5b92dfac 648 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 351 380 4.2E-42 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 SYN_00971 22c253b14aa75f1283ae683b5b92dfac 648 Gene3D G3DSA:3.30.450.20 170 299 5.6E-33 T 11-10-2018 SYN_00971 22c253b14aa75f1283ae683b5b92dfac 648 Pfam PF02743 Cache domain 35 281 2.5E-32 T 11-10-2018 IPR033479 Double Cache domain 1 SYN_00971 22c253b14aa75f1283ae683b5b92dfac 648 SMART SM00283 330 584 3.3E-64 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SYN_00971 22c253b14aa75f1283ae683b5b92dfac 648 SUPERFAMILY SSF58104 324 580 3.01E-59 T 11-10-2018 SYN_00971 22c253b14aa75f1283ae683b5b92dfac 648 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 391 545 2.4E-44 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 SYN_00971 22c253b14aa75f1283ae683b5b92dfac 648 SUPERFAMILY SSF103190 55 189 3.14E-10 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily SYN_00467 ae1ab1b55f1e73e6e0f8c4e74b045568 172 SUPERFAMILY SSF47240 2 154 1.5E-25 T 11-10-2018 IPR009078 Ferritin-like superfamily SYN_00467 ae1ab1b55f1e73e6e0f8c4e74b045568 172 Pfam PF02915 Rubrerythrin 7 148 3.5E-13 T 11-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 SYN_00467 ae1ab1b55f1e73e6e0f8c4e74b045568 172 Gene3D G3DSA:1.20.1260.10 3 154 6.0E-27 T 11-10-2018 IPR012347 Ferritin-like SYN_01709 f718b6cb0319cada893e2bf5cbb9e60f 348 Gene3D G3DSA:1.10.1040.10 193 222 2.8E-10 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SYN_01709 f718b6cb0319cada893e2bf5cbb9e60f 348 Gene3D G3DSA:3.40.50.720 1 192 2.1E-67 T 11-10-2018 SYN_01709 f718b6cb0319cada893e2bf5cbb9e60f 348 Gene3D G3DSA:1.10.1040.10 223 285 3.2E-31 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SYN_01709 f718b6cb0319cada893e2bf5cbb9e60f 348 Gene3D G3DSA:1.10.1040.10 286 348 2.1E-10 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SYN_01709 f718b6cb0319cada893e2bf5cbb9e60f 348 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 27 191 4.8E-41 T 11-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 SYN_01709 f718b6cb0319cada893e2bf5cbb9e60f 348 SUPERFAMILY SSF51735 22 192 8.41E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_01709 f718b6cb0319cada893e2bf5cbb9e60f 348 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 28 344 5.4E-90 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 SYN_01709 f718b6cb0319cada893e2bf5cbb9e60f 348 SUPERFAMILY SSF48179 199 345 1.7E-48 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 SYN_01709 f718b6cb0319cada893e2bf5cbb9e60f 348 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 199 343 2.5E-39 T 11-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 SYN_02047 641bfad67cd82a447d88751b2babc35c 139 ProDom PD012969 UPF0211 RIKEN CDNA ENRICHED MALE FULL-LENGTH LIBRARY ZBTB8OS ADULT C43H8.1 11 139 3.0E-20 T 11-10-2018 IPR023572 Archease domain Reactome: R-HSA-6784531 SYN_02047 641bfad67cd82a447d88751b2babc35c 139 SUPERFAMILY SSF69819 5 139 7.46E-37 T 11-10-2018 IPR036820 Archease domain superfamily Reactome: R-HSA-6784531 SYN_02047 641bfad67cd82a447d88751b2babc35c 139 Pfam PF01951 Archease protein family (MTH1598/TM1083) 5 139 5.2E-40 T 11-10-2018 IPR023572 Archease domain Reactome: R-HSA-6784531 SYN_02047 641bfad67cd82a447d88751b2babc35c 139 Gene3D G3DSA:3.55.10.10 3 139 1.6E-40 T 11-10-2018 IPR036820 Archease domain superfamily Reactome: R-HSA-6784531 SYN_00826 66d7b96204c9c7b3e2102998d54beb5d 261 Pfam PF13649 Methyltransferase domain 45 141 6.5E-22 T 11-10-2018 SYN_00826 66d7b96204c9c7b3e2102998d54beb5d 261 Gene3D G3DSA:2.20.130.10 154 215 5.5E-67 T 11-10-2018 SYN_00826 66d7b96204c9c7b3e2102998d54beb5d 261 SUPERFAMILY SSF53335 9 256 1.03E-40 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_00826 66d7b96204c9c7b3e2102998d54beb5d 261 Gene3D G3DSA:3.40.50.150 11 229 5.5E-67 T 11-10-2018 SYN_00270 3f830d0304edbe40323ed0502c28071c 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 226 2.5E-20 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 SYN_00270 3f830d0304edbe40323ed0502c28071c 230 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 16 225 2.7E-70 T 11-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 SYN_00270 3f830d0304edbe40323ed0502c28071c 230 Gene3D G3DSA:1.10.3720.10 3 226 6.4E-54 T 11-10-2018 IPR035906 MetI-like superfamily SYN_00270 3f830d0304edbe40323ed0502c28071c 230 SUPERFAMILY SSF161098 11 221 8.63E-46 T 11-10-2018 IPR035906 MetI-like superfamily SYN_02908 3b8f3dea284fa42134592a7cfb6780a1 606 Pfam PF13245 AAA domain 13 223 8.3E-15 T 11-10-2018 SYN_02908 3b8f3dea284fa42134592a7cfb6780a1 606 SUPERFAMILY SSF52540 2 597 4.15E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02908 3b8f3dea284fa42134592a7cfb6780a1 606 Gene3D G3DSA:3.40.50.300 398 598 2.7E-6 T 11-10-2018 SYN_01422 178d3cdf39627e09142b201b3c1e03eb 305 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 225 301 1.0E-22 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 SYN_01422 178d3cdf39627e09142b201b3c1e03eb 305 Gene3D G3DSA:3.30.1150.10 168 304 9.0E-24 T 11-10-2018 SYN_01422 178d3cdf39627e09142b201b3c1e03eb 305 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 225 301 1.9E-19 T 11-10-2018 IPR006260 TonB/TolA, C-terminal SYN_01422 178d3cdf39627e09142b201b3c1e03eb 305 SUPERFAMILY SSF74653 222 299 3.92E-22 T 11-10-2018 SYN_02818 5be564bcac8dd64b6f3ea6266341f768 244 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 108 243 1.5E-32 T 11-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal SYN_02818 5be564bcac8dd64b6f3ea6266341f768 244 Pfam PF13144 Chaperone for flagella basal body P-ring formation 40 242 1.8E-44 T 11-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal SYN_02818 5be564bcac8dd64b6f3ea6266341f768 244 SMART SM00858 119 181 1.5E-5 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 SYN_02818 5be564bcac8dd64b6f3ea6266341f768 244 Gene3D G3DSA:2.30.30.760 186 244 1.3E-11 T 11-10-2018 SYN_01864 48d3b573cad2330d9b55a945c742a638 147 TIGRFAM TIGR02747 TraV: type IV conjugative transfer system protein TraV 3 135 1.7E-13 T 11-10-2018 IPR014118 Type IV conjugative transfer system protein TraV SYN_01864 48d3b573cad2330d9b55a945c742a638 147 Pfam PF09676 Type IV conjugative transfer system lipoprotein (TraV) 25 135 1.9E-21 T 11-10-2018 IPR014118 Type IV conjugative transfer system protein TraV SYN_01658 50d7a8634464d93cf0fd456808b6d53f 183 Pfam PF12800 4Fe-4S binding domain 117 130 0.2 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_01658 50d7a8634464d93cf0fd456808b6d53f 183 Gene3D G3DSA:3.30.70.20 38 94 8.6E-14 T 11-10-2018 SYN_01658 50d7a8634464d93cf0fd456808b6d53f 183 Gene3D G3DSA:3.30.70.20 107 171 1.0E-8 T 11-10-2018 SYN_01658 50d7a8634464d93cf0fd456808b6d53f 183 SUPERFAMILY SSF54862 65 165 1.05E-13 T 11-10-2018 SYN_01658 50d7a8634464d93cf0fd456808b6d53f 183 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 72 83 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_01658 50d7a8634464d93cf0fd456808b6d53f 183 SUPERFAMILY SSF54862 37 90 5.47E-16 T 11-10-2018 SYN_01658 50d7a8634464d93cf0fd456808b6d53f 183 Pfam PF00037 4Fe-4S binding domain 65 88 6.5E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_01658 50d7a8634464d93cf0fd456808b6d53f 183 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 117 128 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_00514 3c33efc8adc8a69992598be6f101adf9 203 SUPERFAMILY SSF52218 1 201 8.67E-58 T 11-10-2018 IPR029039 Flavoprotein-like superfamily SYN_00514 3c33efc8adc8a69992598be6f101adf9 203 Gene3D G3DSA:3.40.50.360 1 203 4.9E-70 T 11-10-2018 IPR029039 Flavoprotein-like superfamily SYN_00514 3c33efc8adc8a69992598be6f101adf9 203 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 2 201 3.6E-86 T 11-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 SYN_00514 3c33efc8adc8a69992598be6f101adf9 203 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 203 46.087 T 11-10-2018 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 SYN_00514 3c33efc8adc8a69992598be6f101adf9 203 Pfam PF03358 NADPH-dependent FMN reductase 1 145 1.6E-10 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 SYN_01814 6785c9a323a3bca7aa8e4c51f6241621 129 Gene3D G3DSA:3.30.1330.40 1 128 1.3E-52 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 SYN_01814 6785c9a323a3bca7aa8e4c51f6241621 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 102 120 - T 11-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 SYN_01814 6785c9a323a3bca7aa8e4c51f6241621 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 125 3.9E-50 T 11-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 SYN_01814 6785c9a323a3bca7aa8e4c51f6241621 129 SUPERFAMILY SSF55298 2 127 7.7E-47 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 SYN_01814 6785c9a323a3bca7aa8e4c51f6241621 129 Pfam PF01042 Endoribonuclease L-PSP 10 125 7.4E-43 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 SYN_02179 c16cb1af38c25acae0c5a6bc275c51c0 440 Gene3D G3DSA:2.40.50.140 378 440 1.1E-14 T 11-10-2018 SYN_02179 c16cb1af38c25acae0c5a6bc275c51c0 440 Gene3D G3DSA:3.90.226.10 34 254 1.1E-50 T 11-10-2018 SYN_02179 c16cb1af38c25acae0c5a6bc275c51c0 440 SUPERFAMILY SSF141322 375 439 6.15E-13 T 11-10-2018 SYN_02179 c16cb1af38c25acae0c5a6bc275c51c0 440 Pfam PF01957 NfeD-like C-terminal, partner-binding 303 440 1.8E-29 T 11-10-2018 IPR002810 NfeD-like, C-terminal domain SYN_02179 c16cb1af38c25acae0c5a6bc275c51c0 440 SUPERFAMILY SSF52096 40 203 2.29E-23 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily SYN_01815 35cd4b7fe449dcef160a33442ba77486 238 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 24 230 9.0E-31 T 11-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 SYN_02313 f45316367967dd9571c732b6abc2d10e 304 Pfam PF13936 Helix-turn-helix domain 248 290 3.7E-9 T 11-10-2018 IPR025246 Transposase IS30-like HTH domain SYN_02313 f45316367967dd9571c732b6abc2d10e 304 Pfam PF10543 ORF6N domain 90 157 1.5E-15 T 11-10-2018 IPR018873 KilA-N, DNA-binding domain SYN_00895 2742b2962df9958045ebf954ed568f71 239 Gene3D G3DSA:3.10.520.10 14 239 1.2E-84 T 11-10-2018 SYN_00895 2742b2962df9958045ebf954ed568f71 239 SUPERFAMILY SSF143631 2 238 2.75E-74 T 11-10-2018 IPR003374 ApbE-like superfamily SYN_00895 2742b2962df9958045ebf954ed568f71 239 PIRSF PIRSF006421 8 239 6.5E-63 T 11-10-2018 IPR007183 Uncharacterised protein family UPF0280 SYN_00887 fe3f46442996a8893b9a9e5b765b6430 463 Pfam PF00365 Phosphofructokinase 90 396 3.6E-59 T 11-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 SYN_00887 fe3f46442996a8893b9a9e5b765b6430 463 Hamap MF_01981 ATP-dependent 6-phosphofructokinase [pfkA]. 16 448 51.003 T 11-10-2018 IPR012004 Pyrophosphate-dependent phosphofructokinase TP0108-type GO:0003872|GO:0005524|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 SYN_00887 fe3f46442996a8893b9a9e5b765b6430 463 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 178 194 7.2E-21 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 SYN_00887 fe3f46442996a8893b9a9e5b765b6430 463 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 91 110 7.2E-21 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 SYN_00887 fe3f46442996a8893b9a9e5b765b6430 463 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 229 247 7.2E-21 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 SYN_00887 fe3f46442996a8893b9a9e5b765b6430 463 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 250 266 7.2E-21 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 SYN_00887 fe3f46442996a8893b9a9e5b765b6430 463 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 307 319 7.2E-21 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 SYN_00887 fe3f46442996a8893b9a9e5b765b6430 463 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 211 228 7.2E-21 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 SYN_00887 fe3f46442996a8893b9a9e5b765b6430 463 PIRSF PIRSF000534 9 452 1.7E-173 T 11-10-2018 IPR012004 Pyrophosphate-dependent phosphofructokinase TP0108-type GO:0003872|GO:0005524|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 SYN_00887 fe3f46442996a8893b9a9e5b765b6430 463 Gene3D G3DSA:3.40.50.450 83 270 1.3E-59 T 11-10-2018 SYN_00887 fe3f46442996a8893b9a9e5b765b6430 463 SUPERFAMILY SSF53784 67 453 6.93E-116 T 11-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 SYN_00158 fe64cdb69013087ede069a0d012b8446 198 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 31 190 2.1E-50 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SYN_00158 fe64cdb69013087ede069a0d012b8446 198 Gene3D G3DSA:3.20.130.10 10 190 4.0E-63 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 SYN_00158 fe64cdb69013087ede069a0d012b8446 198 SUPERFAMILY SSF117457 19 189 4.84E-58 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 SYN_00158 fe64cdb69013087ede069a0d012b8446 198 Pfam PF05683 Fumarase C-terminus 17 190 1.1E-52 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 SYN_01811 2c58064700b69ed5d0275d3f458b693a 226 SUPERFAMILY SSF55469 9 225 2.09E-49 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SYN_01811 2c58064700b69ed5d0275d3f458b693a 226 Gene3D G3DSA:3.40.109.10 7 226 1.1E-58 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SYN_01811 2c58064700b69ed5d0275d3f458b693a 226 Pfam PF00881 Nitroreductase family 16 201 1.2E-33 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 SYN_01923 4b42892992bab77f5273fdb831b5db92 252 SUPERFAMILY SSF102705 1 248 7.32E-61 T 11-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily SYN_01923 4b42892992bab77f5273fdb831b5db92 252 Gene3D G3DSA:3.40.1390.30 6 239 1.3E-74 T 11-10-2018 SYN_01923 4b42892992bab77f5273fdb831b5db92 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 250 7.3E-56 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SYN_01923 4b42892992bab77f5273fdb831b5db92 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 239 2.7E-55 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SYN_01923 4b42892992bab77f5273fdb831b5db92 252 Gene3D G3DSA:3.40.1390.30 96 223 1.3E-74 T 11-10-2018 SYN_02017 e1b9d1edeff6d8dca3496898303b1011 125 Pfam PF04126 Cyclophilin-like 4 122 7.5E-45 T 11-10-2018 IPR025658 Cyclophilin TM1367-like domain SYN_02017 e1b9d1edeff6d8dca3496898303b1011 125 SUPERFAMILY SSF50891 5 124 2.01E-31 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily SYN_02017 e1b9d1edeff6d8dca3496898303b1011 125 Gene3D G3DSA:2.40.100.20 2 125 1.4E-37 T 11-10-2018 SYN_00906 792d41648655e0f8e524ca5911486963 355 PIRSF PIRSF004640 1 355 1.4E-142 T 11-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 SYN_00906 792d41648655e0f8e524ca5911486963 355 Gene3D G3DSA:3.30.413.10 259 355 3.5E-36 T 11-10-2018 SYN_00906 792d41648655e0f8e524ca5911486963 355 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 7 350 2.6E-126 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 SYN_00906 792d41648655e0f8e524ca5911486963 355 Pfam PF04551 GcpE protein 10 350 2.3E-133 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 SYN_00906 792d41648655e0f8e524ca5911486963 355 SUPERFAMILY SSF51717 36 211 5.81E-10 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SYN_00906 792d41648655e0f8e524ca5911486963 355 SUPERFAMILY SSF56014 263 344 4.67E-10 T 11-10-2018 SYN_00906 792d41648655e0f8e524ca5911486963 355 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 5 354 33.651 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 SYN_00906 792d41648655e0f8e524ca5911486963 355 Gene3D G3DSA:3.20.20.20 1 258 1.4E-103 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SYN_00320 dfee1d0116d4627f601598830cc5af4e 322 Pfam PF00753 Metallo-beta-lactamase superfamily 25 235 7.6E-22 T 11-10-2018 IPR001279 Metallo-beta-lactamase SYN_00320 dfee1d0116d4627f601598830cc5af4e 322 Gene3D G3DSA:3.60.15.10 2 263 2.9E-56 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_00320 dfee1d0116d4627f601598830cc5af4e 322 SMART SM00849 23 235 1.4E-25 T 11-10-2018 IPR001279 Metallo-beta-lactamase SYN_00320 dfee1d0116d4627f601598830cc5af4e 322 SUPERFAMILY SSF56281 2 308 1.7E-52 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_02817 ba88e918f37916ff033532837d632409 238 PRINTS PR01008 Flagellar L-ring protein signature 199 213 3.1E-19 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SYN_02817 ba88e918f37916ff033532837d632409 238 PRINTS PR01008 Flagellar L-ring protein signature 215 229 3.1E-19 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SYN_02817 ba88e918f37916ff033532837d632409 238 PRINTS PR01008 Flagellar L-ring protein signature 74 86 3.1E-19 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SYN_02817 ba88e918f37916ff033532837d632409 238 PRINTS PR01008 Flagellar L-ring protein signature 152 167 3.1E-19 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SYN_02817 ba88e918f37916ff033532837d632409 238 PRINTS PR01008 Flagellar L-ring protein signature 178 194 3.1E-19 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SYN_02817 ba88e918f37916ff033532837d632409 238 Hamap MF_00415 Flagellar L-ring protein [flgH]. 12 236 24.279 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SYN_02817 ba88e918f37916ff033532837d632409 238 Pfam PF02107 Flagellar L-ring protein 53 237 7.3E-57 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 SYN_02660 af1503912dcdcec03e01db904ac85d97 363 Pfam PF00535 Glycosyl transferase family 2 29 188 2.7E-31 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 SYN_02660 af1503912dcdcec03e01db904ac85d97 363 Gene3D G3DSA:3.90.550.10 7 262 1.1E-66 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_02660 af1503912dcdcec03e01db904ac85d97 363 SUPERFAMILY SSF53448 26 246 5.63E-61 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_03031 6adf32ff75603891641b1a5189a14be2 289 SUPERFAMILY SSF52540 115 288 1.6E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_03031 6adf32ff75603891641b1a5189a14be2 289 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 117 228 1.4E-8 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SYN_03031 6adf32ff75603891641b1a5189a14be2 289 Gene3D G3DSA:3.40.50.300 11 289 4.1E-52 T 11-10-2018 SYN_03212 f6e6fd282301cf03742494b6c48dd18a 99 SUPERFAMILY SSF102114 32 96 6.15E-6 T 11-10-2018 SYN_03606 f64f6f41b49cf8aa9b6c2f23b887c879 219 Pfam PF02223 Thymidylate kinase 7 202 8.0E-45 T 11-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 SYN_03606 f64f6f41b49cf8aa9b6c2f23b887c879 219 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 3 203 3.5E-50 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 SYN_03606 f64f6f41b49cf8aa9b6c2f23b887c879 219 SUPERFAMILY SSF52540 1 212 1.39E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_03606 f64f6f41b49cf8aa9b6c2f23b887c879 219 Gene3D G3DSA:3.40.50.300 2 212 4.0E-64 T 11-10-2018 SYN_03606 f64f6f41b49cf8aa9b6c2f23b887c879 219 Hamap MF_00165 Thymidylate kinase [tmk]. 3 211 28.941 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 SYN_01607 49b8e7de0467db8640f8600c925983f1 768 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 58 768 16.023 T 11-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 SYN_01607 49b8e7de0467db8640f8600c925983f1 768 Pfam PF03968 OstA-like protein 85 214 9.8E-6 T 11-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal SYN_01607 49b8e7de0467db8640f8600c925983f1 768 Pfam PF04453 Organic solvent tolerance protein 336 719 9.1E-31 T 11-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 SYN_01961 a31bf03a6dd9d7f484c4dac8db2a10e4 300 Gene3D G3DSA:1.10.101.10 225 298 1.7E-18 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 SYN_01961 a31bf03a6dd9d7f484c4dac8db2a10e4 300 Pfam PF01471 Putative peptidoglycan binding domain 236 291 3.7E-15 T 11-10-2018 IPR002477 Peptidoglycan binding-like SYN_01961 a31bf03a6dd9d7f484c4dac8db2a10e4 300 SUPERFAMILY SSF47090 230 292 7.46E-16 T 11-10-2018 IPR036365 PGBD-like superfamily SYN_01512 d5098a6702a0a6bbc4d49264268cff43 231 Pfam PF13635 Domain of unknown function (DUF4143) 46 154 2.9E-13 T 11-10-2018 IPR025420 Domain of unknown function DUF4143 SYN_00926 ab30d3eb700e50bfc53e35d171d3bc92 61 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 3.2E-20 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 SYN_00926 ab30d3eb700e50bfc53e35d171d3bc92 61 Pfam PF02416 mttA/Hcf106 family 4 52 5.2E-20 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 SYN_00926 ab30d3eb700e50bfc53e35d171d3bc92 61 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 2.0E-5 T 11-10-2018 SYN_00926 ab30d3eb700e50bfc53e35d171d3bc92 61 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 2.0E-5 T 11-10-2018 SYN_00926 ab30d3eb700e50bfc53e35d171d3bc92 61 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 61 20.176 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 SYN_02216 85c10e25956246f42c65d225f9a82e2f 176 Pfam PF13801 Heavy-metal resistance 7 127 2.1E-13 T 11-10-2018 IPR025961 Heavy-metal resistance protein SYN_02216 85c10e25956246f42c65d225f9a82e2f 176 ProDom PD097062 ZINC RESISTANCE-ASSOCIATED PERIPLASMIC PRECURSOR SIGNAL YJAI SEQUENCING DIRECT DFFA 23 112 0.002 T 11-10-2018 IPR020365 Zinc resistance-associated protein, ZraP GO:0008270|GO:0042597 SYN_02216 85c10e25956246f42c65d225f9a82e2f 176 Gene3D G3DSA:1.20.120.1490 39 133 2.5E-16 T 11-10-2018 SYN_01105 ee5239be2c54c9b548ee3c42777b6751 620 SUPERFAMILY SSF51126 31 600 8.84E-21 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor SYN_01105 ee5239be2c54c9b548ee3c42777b6751 620 Gene3D G3DSA:2.160.20.10 86 383 5.4E-9 T 11-10-2018 IPR012334 Pectin lyase fold SYN_01105 ee5239be2c54c9b548ee3c42777b6751 620 SMART SM00710 299 325 200.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat SYN_01105 ee5239be2c54c9b548ee3c42777b6751 620 SMART SM00710 353 389 1600.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat SYN_01105 ee5239be2c54c9b548ee3c42777b6751 620 SMART SM00710 326 347 420.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat SYN_01105 ee5239be2c54c9b548ee3c42777b6751 620 SMART SM00710 237 264 5200.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat SYN_01105 ee5239be2c54c9b548ee3c42777b6751 620 SMART SM00710 271 292 6.8 T 11-10-2018 IPR006626 Parallel beta-helix repeat SYN_01105 ee5239be2c54c9b548ee3c42777b6751 620 SMART SM00710 430 455 9100.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat SYN_01105 ee5239be2c54c9b548ee3c42777b6751 620 SMART SM00710 397 422 6300.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat SYN_03207 a45e0bcf5208bf8a41e5adc2ebdef9a7 130 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 17 87 2.6E-20 T 11-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 SYN_03207 a45e0bcf5208bf8a41e5adc2ebdef9a7 130 Pfam PF04347 Flagellar biosynthesis protein, FliO 29 116 1.3E-12 T 11-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 SYN_03702 38173fa5e09b6faa97e29f38e017e499 181 Pfam PF00156 Phosphoribosyl transferase domain 16 149 3.1E-22 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 SYN_03702 38173fa5e09b6faa97e29f38e017e499 181 SUPERFAMILY SSF53271 5 172 3.93E-42 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like SYN_03702 38173fa5e09b6faa97e29f38e017e499 181 Gene3D G3DSA:3.40.50.2020 1 181 5.9E-59 T 11-10-2018 SYN_03702 38173fa5e09b6faa97e29f38e017e499 181 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 5 178 36.285 T 11-10-2018 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 SYN_03680 68d75c084e9b6713a69c773be226f317 64 Gene3D G3DSA:3.40.30.10 16 64 3.3E-11 T 11-10-2018 SYN_03680 68d75c084e9b6713a69c773be226f317 64 SUPERFAMILY SSF52833 20 63 2.03E-11 T 11-10-2018 IPR036249 Thioredoxin-like superfamily SYN_03680 68d75c084e9b6713a69c773be226f317 64 Pfam PF00578 AhpC/TSA family 26 62 3.8E-6 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 SYN_02686 641804a2b0fd59bff3250d1e729ad98a 175 Pfam PF02397 Bacterial sugar transferase 2 157 2.3E-58 T 11-10-2018 IPR003362 Bacterial sugar transferase SYN_02056 e933bc2fc6c32272b9c24e24b32819bc 400 Gene3D G3DSA:3.90.1150.10 252 400 1.4E-47 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SYN_02056 e933bc2fc6c32272b9c24e24b32819bc 400 Gene3D G3DSA:3.40.640.10 2 251 2.8E-85 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SYN_02056 e933bc2fc6c32272b9c24e24b32819bc 400 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 8 392 3.2E-89 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SYN_02056 e933bc2fc6c32272b9c24e24b32819bc 400 PIRSF PIRSF000390 4 396 1.1E-91 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SYN_02056 e933bc2fc6c32272b9c24e24b32819bc 400 SUPERFAMILY SSF53383 2 396 7.34E-87 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SYN_02171 fb4130d41e02cc143456eb5362160902 327 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_02171 fb4130d41e02cc143456eb5362160902 327 SUPERFAMILY SSF52540 33 316 5.9E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02171 fb4130d41e02cc143456eb5362160902 327 SMART SM00382 33 233 1.3E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_02171 fb4130d41e02cc143456eb5362160902 327 Pfam PF00005 ABC transporter 25 183 1.4E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_02171 fb4130d41e02cc143456eb5362160902 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 322 2.7E-28 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SYN_02171 fb4130d41e02cc143456eb5362160902 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 302 1.8E-17 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SYN_02171 fb4130d41e02cc143456eb5362160902 327 Gene3D G3DSA:3.40.50.300 1 326 4.4E-100 T 11-10-2018 SYN_02020 62e0042c71b832310956d0091092f584 254 Pfam PF00881 Nitroreductase family 71 252 3.4E-26 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 SYN_02020 62e0042c71b832310956d0091092f584 254 SUPERFAMILY SSF55469 65 253 2.13E-31 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SYN_02020 62e0042c71b832310956d0091092f584 254 Gene3D G3DSA:3.40.109.10 22 253 1.0E-60 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SYN_02020 62e0042c71b832310956d0091092f584 254 TIGRFAM TIGR03605 antibiot_sagB: SagB-type dehydrogenase domain 87 253 7.7E-32 T 11-10-2018 IPR020051 SagB-type dehydrogenase domain SYN_00846 e96210856de86a370716326c9a80a48a 487 Pfam PF00939 Sodium:sulfate symporter transmembrane region 10 485 7.3E-35 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 SYN_02608 72a6a13fa178727e6f22afb9412690e4 183 Gene3D G3DSA:3.30.1380.10 46 180 2.9E-13 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 SYN_02608 72a6a13fa178727e6f22afb9412690e4 183 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 105 181 4.1E-16 T 11-10-2018 IPR039561 Peptidase M15C GO:0008233 SYN_02608 72a6a13fa178727e6f22afb9412690e4 183 SUPERFAMILY SSF55166 33 180 3.84E-23 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 SYN_00247 06c68fc50306ddc30364fb2b95dcc06a 225 Gene3D G3DSA:3.30.70.20 7 65 8.5E-11 T 11-10-2018 SYN_00247 06c68fc50306ddc30364fb2b95dcc06a 225 Pfam PF12837 4Fe-4S binding domain 7 30 1.4E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_00247 06c68fc50306ddc30364fb2b95dcc06a 225 SUPERFAMILY SSF54862 4 67 9.04E-16 T 11-10-2018 SYN_00302 92db3a0ff4fc7a0040ab1761787a6abd 232 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 14 216 27.55 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SYN_00302 92db3a0ff4fc7a0040ab1761787a6abd 232 Pfam PF02581 Thiamine monophosphate synthase 17 198 8.4E-64 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SYN_00302 92db3a0ff4fc7a0040ab1761787a6abd 232 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 16 209 1.4E-61 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SYN_00302 92db3a0ff4fc7a0040ab1761787a6abd 232 SUPERFAMILY SSF51391 9 212 1.83E-66 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SYN_00302 92db3a0ff4fc7a0040ab1761787a6abd 232 Gene3D G3DSA:3.20.20.70 1 218 6.2E-73 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_00453 2db85b4fd89e3917a09951d9b0e8067e 309 Gene3D G3DSA:1.10.40.60 104 209 1.9E-11 T 11-10-2018 IPR038072 GspK, central domain superfamily SYN_00453 2db85b4fd89e3917a09951d9b0e8067e 309 SUPERFAMILY SSF158544 116 208 1.23E-16 T 11-10-2018 IPR038072 GspK, central domain superfamily SYN_00453 2db85b4fd89e3917a09951d9b0e8067e 309 Pfam PF03934 Type II secretion system (T2SS), protein K 91 243 4.3E-21 T 11-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 SYN_01772 4870975a234a51e0f9089e69bc27ec0a 590 Gene3D G3DSA:3.55.50.30 173 297 2.4E-34 T 11-10-2018 SYN_01772 4870975a234a51e0f9089e69bc27ec0a 590 SMART SM00965 226 274 1.2E-5 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 SYN_01772 4870975a234a51e0f9089e69bc27ec0a 590 Pfam PF00263 Bacterial type II and III secretion system protein 420 578 2.0E-47 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 SYN_01772 4870975a234a51e0f9089e69bc27ec0a 590 PRINTS PR00811 Bacterial general secretion pathway protein D signature 314 324 2.3E-19 T 11-10-2018 IPR001775 GspD/PilQ family SYN_01772 4870975a234a51e0f9089e69bc27ec0a 590 PRINTS PR00811 Bacterial general secretion pathway protein D signature 543 561 2.3E-19 T 11-10-2018 IPR001775 GspD/PilQ family SYN_01772 4870975a234a51e0f9089e69bc27ec0a 590 PRINTS PR00811 Bacterial general secretion pathway protein D signature 416 440 2.3E-19 T 11-10-2018 IPR001775 GspD/PilQ family SYN_01772 4870975a234a51e0f9089e69bc27ec0a 590 PRINTS PR00811 Bacterial general secretion pathway protein D signature 566 580 2.3E-19 T 11-10-2018 IPR001775 GspD/PilQ family SYN_01772 4870975a234a51e0f9089e69bc27ec0a 590 Pfam PF07660 Secretin and TonB N terminus short domain 226 272 2.0E-7 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 SYN_00949 b142784b5107f6714f2421f2d5a3f369 183 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 19 170 3.2E-54 T 11-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 SYN_00949 b142784b5107f6714f2421f2d5a3f369 183 Gene3D G3DSA:3.40.50.1000 12 181 2.1E-55 T 11-10-2018 IPR023214 HAD superfamily SYN_00949 b142784b5107f6714f2421f2d5a3f369 183 SUPERFAMILY SSF56784 16 177 5.35E-43 T 11-10-2018 IPR036412 HAD-like superfamily SYN_00949 b142784b5107f6714f2421f2d5a3f369 183 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 20 133 2.2E-14 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 SYN_00949 b142784b5107f6714f2421f2d5a3f369 183 PIRSF PIRSF006118 7 181 3.1E-65 T 11-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 SYN_00949 b142784b5107f6714f2421f2d5a3f369 183 Pfam PF08282 haloacid dehalogenase-like hydrolase 87 152 2.5E-10 T 11-10-2018 SYN_02261 3947f06dc0116a9e8b6c57f54de7057d 901 SMART SM00482 658 864 1.4E-114 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SYN_02261 3947f06dc0116a9e8b6c57f54de7057d 901 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 15 176 1.7E-56 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 SYN_02261 3947f06dc0116a9e8b6c57f54de7057d 901 Gene3D G3DSA:3.30.70.370 636 896 1.3E-110 T 11-10-2018 SYN_02261 3947f06dc0116a9e8b6c57f54de7057d 901 SUPERFAMILY SSF53098 307 492 1.39E-31 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily SYN_02261 3947f06dc0116a9e8b6c57f54de7057d 901 TIGRFAM TIGR00593 pola: DNA polymerase I 15 900 1.5E-304 T 11-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SYN_02261 3947f06dc0116a9e8b6c57f54de7057d 901 Pfam PF00476 DNA polymerase family A 524 898 1.0E-158 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SYN_02261 3947f06dc0116a9e8b6c57f54de7057d 901 PRINTS PR00868 DNA-polymerase family A (pol I) signature 672 695 1.1E-77 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SYN_02261 3947f06dc0116a9e8b6c57f54de7057d 901 PRINTS PR00868 DNA-polymerase family A (pol I) signature 763 774 1.1E-77 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SYN_02261 3947f06dc0116a9e8b6c57f54de7057d 901 PRINTS PR00868 DNA-polymerase family A (pol I) signature 847 860 1.1E-77 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SYN_02261 3947f06dc0116a9e8b6c57f54de7057d 901 PRINTS PR00868 DNA-polymerase family A (pol I) signature 627 649 1.1E-77 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SYN_02261 3947f06dc0116a9e8b6c57f54de7057d 901 PRINTS PR00868 DNA-polymerase family A (pol I) signature 817 833 1.1E-77 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SYN_02261 3947f06dc0116a9e8b6c57f54de7057d 901 PRINTS PR00868 DNA-polymerase family A (pol I) signature 650 665 1.1E-77 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SYN_02261 3947f06dc0116a9e8b6c57f54de7057d 901 PRINTS PR00868 DNA-polymerase family A (pol I) signature 702 715 1.1E-77 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SYN_02261 3947f06dc0116a9e8b6c57f54de7057d 901 PRINTS PR00868 DNA-polymerase family A (pol I) signature 726 751 1.1E-77 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SYN_02261 3947f06dc0116a9e8b6c57f54de7057d 901 PRINTS PR00868 DNA-polymerase family A (pol I) signature 785 796 1.1E-77 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SYN_02261 3947f06dc0116a9e8b6c57f54de7057d 901 Gene3D G3DSA:3.40.50.1010 16 284 1.1E-99 T 11-10-2018 SYN_02261 3947f06dc0116a9e8b6c57f54de7057d 901 Gene3D G3DSA:3.30.420.10 300 514 7.0E-43 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 SYN_02261 3947f06dc0116a9e8b6c57f54de7057d 901 Gene3D G3DSA:1.10.150.20 681 824 1.3E-110 T 11-10-2018 SYN_02261 3947f06dc0116a9e8b6c57f54de7057d 901 SUPERFAMILY SSF88723 10 176 1.13E-56 T 11-10-2018 IPR029060 PIN-like domain superfamily SYN_02261 3947f06dc0116a9e8b6c57f54de7057d 901 SMART SM00474 302 491 2.2E-9 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 SYN_02261 3947f06dc0116a9e8b6c57f54de7057d 901 Gene3D G3DSA:1.20.1060.10 516 630 7.6E-40 T 11-10-2018 SYN_02261 3947f06dc0116a9e8b6c57f54de7057d 901 SUPERFAMILY SSF56672 495 900 3.34E-155 T 11-10-2018 SYN_02261 3947f06dc0116a9e8b6c57f54de7057d 901 Gene3D G3DSA:1.10.150.20 180 253 1.1E-99 T 11-10-2018 SYN_02261 3947f06dc0116a9e8b6c57f54de7057d 901 ProSitePatterns PS00447 DNA polymerase family A signature. 726 745 - T 11-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SYN_02261 3947f06dc0116a9e8b6c57f54de7057d 901 SUPERFAMILY SSF47807 177 293 2.39E-28 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily SYN_02261 3947f06dc0116a9e8b6c57f54de7057d 901 SMART SM00475 11 268 2.7E-125 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 SYN_02261 3947f06dc0116a9e8b6c57f54de7057d 901 Pfam PF01612 3'-5' exonuclease 371 444 1.2E-6 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 SYN_02261 3947f06dc0116a9e8b6c57f54de7057d 901 SMART SM00279 179 214 5.6E-13 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 SYN_02261 3947f06dc0116a9e8b6c57f54de7057d 901 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 177 272 1.4E-27 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 SYN_00825 cc9b7d1f1e008853ae1901b700056c87 273 Pfam PF01061 ABC-2 type transporter 25 231 8.3E-25 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 SYN_01176 25345f2cc51bc494fa84f82155d4c6d7 254 Gene3D G3DSA:3.40.50.11590 110 222 5.9E-21 T 11-10-2018 SYN_01176 25345f2cc51bc494fa84f82155d4c6d7 254 Pfam PF04016 Putative heavy-metal chelation 113 251 1.5E-37 T 11-10-2018 IPR007161 Putative heavy-metal chelation domain SYN_01176 25345f2cc51bc494fa84f82155d4c6d7 254 Gene3D G3DSA:3.30.390.100 17 230 5.9E-21 T 11-10-2018 SYN_01176 25345f2cc51bc494fa84f82155d4c6d7 254 Pfam PF13938 Putative heavy-metal chelation 18 96 2.3E-18 T 11-10-2018 IPR025251 Domain of unknown function DUF4213 SYN_01176 25345f2cc51bc494fa84f82155d4c6d7 254 SUPERFAMILY SSF159713 12 250 4.97E-55 T 11-10-2018 SYN_01166 9bef8f3ce1c2e7900b30bd23492690cb 386 Pfam PF02754 Cysteine-rich domain 269 357 2.5E-16 T 11-10-2018 IPR004017 Cysteine-rich domain SYN_01166 9bef8f3ce1c2e7900b30bd23492690cb 386 Pfam PF02754 Cysteine-rich domain 145 225 6.9E-8 T 11-10-2018 IPR004017 Cysteine-rich domain SYN_01166 9bef8f3ce1c2e7900b30bd23492690cb 386 SUPERFAMILY SSF46548 4 78 3.66E-9 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SYN_01166 9bef8f3ce1c2e7900b30bd23492690cb 386 Pfam PF13183 4Fe-4S dicluster domain 8 78 5.2E-10 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_02671 0584e9d1a961b34903e030c25d60a2aa 394 PIRSF PIRSF000390 6 393 4.8E-98 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SYN_02671 0584e9d1a961b34903e030c25d60a2aa 394 Gene3D G3DSA:3.90.1150.10 274 394 5.0E-33 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SYN_02671 0584e9d1a961b34903e030c25d60a2aa 394 Gene3D G3DSA:3.40.640.10 2 270 1.2E-89 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SYN_02671 0584e9d1a961b34903e030c25d60a2aa 394 SUPERFAMILY SSF53383 14 393 2.26E-108 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SYN_02671 0584e9d1a961b34903e030c25d60a2aa 394 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 22 391 1.5E-111 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SYN_01010 9048d8261b79a9e33c80cc682fce7278 476 Pfam PF02321 Outer membrane efflux protein 282 470 1.8E-33 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SYN_01010 9048d8261b79a9e33c80cc682fce7278 476 Pfam PF02321 Outer membrane efflux protein 60 259 8.4E-31 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 SYN_01010 9048d8261b79a9e33c80cc682fce7278 476 Gene3D G3DSA:1.20.1600.10 53 476 5.3E-94 T 11-10-2018 SYN_01010 9048d8261b79a9e33c80cc682fce7278 476 SUPERFAMILY SSF56954 31 472 4.45E-88 T 11-10-2018 SYN_01677 10b9e840fd85658a18b74432fcdaab77 233 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 3 233 26.953 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 SYN_01677 10b9e840fd85658a18b74432fcdaab77 233 Gene3D G3DSA:3.40.140.10 89 233 2.1E-40 T 11-10-2018 SYN_01677 10b9e840fd85658a18b74432fcdaab77 233 SUPERFAMILY SSF53927 12 232 6.92E-54 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 SYN_01677 10b9e840fd85658a18b74432fcdaab77 233 Pfam PF02634 FdhD/NarQ family 96 232 3.4E-44 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 SYN_01677 10b9e840fd85658a18b74432fcdaab77 233 Pfam PF02634 FdhD/NarQ family 26 89 6.3E-9 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 SYN_01677 10b9e840fd85658a18b74432fcdaab77 233 PIRSF PIRSF015626 3 98 1.9E-8 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 SYN_01677 10b9e840fd85658a18b74432fcdaab77 233 PIRSF PIRSF015626 88 233 4.9E-42 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 SYN_01991 818c9c1c667d1dd69f270107dfb19c48 445 SUPERFAMILY SSF51556 66 366 1.09E-99 T 11-10-2018 IPR032466 Metal-dependent hydrolase SYN_01991 818c9c1c667d1dd69f270107dfb19c48 445 Gene3D G3DSA:2.30.40.10 16 432 6.0E-159 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 SYN_01991 818c9c1c667d1dd69f270107dfb19c48 445 Pfam PF01979 Amidohydrolase family 63 414 2.0E-67 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 SYN_01991 818c9c1c667d1dd69f270107dfb19c48 445 Gene3D G3DSA:3.20.20.140 67 358 6.0E-159 T 11-10-2018 SYN_01991 818c9c1c667d1dd69f270107dfb19c48 445 SUPERFAMILY SSF51338 7 440 3.84E-34 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 SYN_01991 818c9c1c667d1dd69f270107dfb19c48 445 Hamap MF_01281 5'-deoxyadenosine deaminase [dadD]. 7 440 45.845 T 11-10-2018 IPR023512 Deaminase MtaD/DadD GO:0019239 SYN_01515 755dc29bfc7095f8adbcf257fc45fe42 423 SMART SM00382 22 223 7.5E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01515 755dc29bfc7095f8adbcf257fc45fe42 423 Gene3D G3DSA:3.40.50.300 1 84 1.6E-8 T 11-10-2018 SYN_01515 755dc29bfc7095f8adbcf257fc45fe42 423 SUPERFAMILY SSF52540 7 221 1.86E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01515 755dc29bfc7095f8adbcf257fc45fe42 423 Pfam PF13635 Domain of unknown function (DUF4143) 213 366 6.0E-19 T 11-10-2018 IPR025420 Domain of unknown function DUF4143 SYN_01515 755dc29bfc7095f8adbcf257fc45fe42 423 Pfam PF13173 AAA domain 24 151 1.2E-25 T 11-10-2018 SYN_01104 51d2529bd65466fa8536f5cfac31b2d2 240 Pfam PF13489 Methyltransferase domain 42 186 1.2E-21 T 11-10-2018 SYN_01104 51d2529bd65466fa8536f5cfac31b2d2 240 Gene3D G3DSA:3.40.50.150 35 197 4.5E-27 T 11-10-2018 SYN_01104 51d2529bd65466fa8536f5cfac31b2d2 240 SUPERFAMILY SSF53335 38 214 3.13E-27 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_03154 1fbb008ab12d117b9b2c786648651055 228 SUPERFAMILY SSF56752 27 189 2.75E-53 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 SYN_03154 1fbb008ab12d117b9b2c786648651055 228 Gene3D G3DSA:3.30.470.10 8 197 9.4E-68 T 11-10-2018 SYN_01816 53a45054ebaa3e3d268038e9102a7618 391 Pfam PF11795 Uncharacterized protein conserved in bacteria N-term (DUF3322) 6 187 4.4E-64 T 11-10-2018 IPR024537 Domain of unknown function DUF3322 SYN_01816 53a45054ebaa3e3d268038e9102a7618 391 Pfam PF09983 Uncharacterized protein conserved in bacteria C-term(DUF2220) 210 387 3.8E-62 T 11-10-2018 IPR024534 Domain of unknown function DUF2220 SYN_01816 53a45054ebaa3e3d268038e9102a7618 391 PIRSF PIRSF028408 1 391 8.8E-88 T 11-10-2018 IPR014544 Uncharacterised conserved protein UCP028408 SYN_00244 3d5571251a1450363b56c654e206e74b 400 PRINTS PR00164 ABC-2 type transport system membrane protein signature 342 361 3.4E-5 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 SYN_00244 3d5571251a1450363b56c654e206e74b 400 PRINTS PR00164 ABC-2 type transport system membrane protein signature 285 309 3.4E-5 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 SYN_00244 3d5571251a1450363b56c654e206e74b 400 PRINTS PR00164 ABC-2 type transport system membrane protein signature 322 341 3.4E-5 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 SYN_00244 3d5571251a1450363b56c654e206e74b 400 Pfam PF12698 ABC-2 family transporter protein 56 390 5.8E-51 T 11-10-2018 SYN_03042 37d7d2306ec135a3f8c61b5c464cb48a 401 Pfam PF01610 Transposase 153 388 5.4E-76 T 11-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SYN_03042 37d7d2306ec135a3f8c61b5c464cb48a 401 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 38 82 2.6E-8 T 11-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger SYN_01809 96b3ac5f5f82b07d22b99ff8a333240c 443 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 347 356 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site SYN_01809 96b3ac5f5f82b07d22b99ff8a333240c 443 SMART SM00448 3 113 7.5E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_01809 96b3ac5f5f82b07d22b99ff8a333240c 443 Gene3D G3DSA:3.40.50.2300 2 134 1.9E-37 T 11-10-2018 SYN_01809 96b3ac5f5f82b07d22b99ff8a333240c 443 Gene3D G3DSA:3.40.50.300 135 309 3.2E-55 T 11-10-2018 SYN_01809 96b3ac5f5f82b07d22b99ff8a333240c 443 SUPERFAMILY SSF52540 139 377 1.42E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01809 96b3ac5f5f82b07d22b99ff8a333240c 443 SUPERFAMILY SSF46689 345 436 1.15E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SYN_01809 96b3ac5f5f82b07d22b99ff8a333240c 443 Pfam PF00072 Response regulator receiver domain 5 113 3.6E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_01809 96b3ac5f5f82b07d22b99ff8a333240c 443 SUPERFAMILY SSF52172 3 184 1.21E-43 T 11-10-2018 IPR011006 CheY-like superfamily SYN_01809 96b3ac5f5f82b07d22b99ff8a333240c 443 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 418 438 1.1E-9 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_01809 96b3ac5f5f82b07d22b99ff8a333240c 443 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 401 418 1.1E-9 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_01809 96b3ac5f5f82b07d22b99ff8a333240c 443 Gene3D G3DSA:1.10.10.60 380 437 1.7E-13 T 11-10-2018 SYN_01809 96b3ac5f5f82b07d22b99ff8a333240c 443 Gene3D G3DSA:1.10.8.60 310 379 6.2E-20 T 11-10-2018 SYN_01809 96b3ac5f5f82b07d22b99ff8a333240c 443 Pfam PF00158 Sigma-54 interaction domain 140 301 1.0E-61 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 SYN_01809 96b3ac5f5f82b07d22b99ff8a333240c 443 Pfam PF02954 Bacterial regulatory protein, Fis family 395 435 8.3E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 SYN_01809 96b3ac5f5f82b07d22b99ff8a333240c 443 SMART SM00382 159 302 5.5E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01899 e3a4d7dd7874d88c516f1a40e5095dcb 255 Pfam PF01695 IstB-like ATP binding protein 55 230 8.6E-55 T 11-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 SYN_01899 e3a4d7dd7874d88c516f1a40e5095dcb 255 Gene3D G3DSA:3.40.50.300 63 243 5.6E-47 T 11-10-2018 SYN_01899 e3a4d7dd7874d88c516f1a40e5095dcb 255 SUPERFAMILY SSF52540 69 242 1.97E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01899 e3a4d7dd7874d88c516f1a40e5095dcb 255 PIRSF PIRSF003073 1 251 2.0E-80 T 11-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein SYN_01899 e3a4d7dd7874d88c516f1a40e5095dcb 255 SMART SM00382 99 231 1.3E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_02874 2dee2b8ddc7741ad49a1a51c550a1b22 314 PRINTS PR00990 Ribokinase signature 218 229 9.9E-5 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 SYN_02874 2dee2b8ddc7741ad49a1a51c550a1b22 314 PRINTS PR00990 Ribokinase signature 41 60 9.9E-5 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 SYN_02874 2dee2b8ddc7741ad49a1a51c550a1b22 314 PRINTS PR00990 Ribokinase signature 14 35 9.9E-5 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 SYN_02874 2dee2b8ddc7741ad49a1a51c550a1b22 314 PRINTS PR00990 Ribokinase signature 179 194 9.9E-5 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 SYN_02874 2dee2b8ddc7741ad49a1a51c550a1b22 314 SUPERFAMILY SSF53613 12 300 1.2E-69 T 11-10-2018 IPR029056 Ribokinase-like SYN_02874 2dee2b8ddc7741ad49a1a51c550a1b22 314 Pfam PF00294 pfkB family carbohydrate kinase 13 291 1.3E-42 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB SYN_02874 2dee2b8ddc7741ad49a1a51c550a1b22 314 Gene3D G3DSA:3.40.1190.20 11 308 2.8E-75 T 11-10-2018 IPR029056 Ribokinase-like SYN_02488 03cb7c5ef5ec6d30f7e57ffea5e178ec 67 SMART SM00357 4 67 1.3E-29 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 SYN_02488 03cb7c5ef5ec6d30f7e57ffea5e178ec 67 PRINTS PR00050 Cold shock protein signature 40 58 9.1E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SYN_02488 03cb7c5ef5ec6d30f7e57ffea5e178ec 67 PRINTS PR00050 Cold shock protein signature 5 20 9.1E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SYN_02488 03cb7c5ef5ec6d30f7e57ffea5e178ec 67 PRINTS PR00050 Cold shock protein signature 25 34 9.1E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SYN_02488 03cb7c5ef5ec6d30f7e57ffea5e178ec 67 SUPERFAMILY SSF50249 1 66 6.64E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold SYN_02488 03cb7c5ef5ec6d30f7e57ffea5e178ec 67 PIRSF PIRSF002599 1 67 2.1E-23 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 SYN_02488 03cb7c5ef5ec6d30f7e57ffea5e178ec 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 16 34 - T 11-10-2018 IPR019844 Cold-shock conserved site SYN_02488 03cb7c5ef5ec6d30f7e57ffea5e178ec 67 Pfam PF00313 'Cold-shock' DNA-binding domain 4 66 1.2E-29 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SYN_02488 03cb7c5ef5ec6d30f7e57ffea5e178ec 67 Gene3D G3DSA:2.40.50.140 2 66 6.5E-30 T 11-10-2018 SYN_01206 f9dac526449e7cc0018ae3d6cc4058c5 295 Gene3D G3DSA:3.40.50.1820 87 290 3.0E-28 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold SYN_01206 f9dac526449e7cc0018ae3d6cc4058c5 295 SUPERFAMILY SSF53474 90 289 5.94E-32 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold SYN_01206 f9dac526449e7cc0018ae3d6cc4058c5 295 Pfam PF12146 Serine aminopeptidase, S33 92 197 8.8E-9 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 SYN_02624 9e46338e88a8b719b269ac4f9fe837ba 166 Gene3D G3DSA:1.10.10.10 5 144 8.7E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_02624 9e46338e88a8b719b269ac4f9fe837ba 166 SMART SM00347 32 132 6.5E-20 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SYN_02624 9e46338e88a8b719b269ac4f9fe837ba 166 Pfam PF01047 MarR family 39 97 3.9E-13 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SYN_02624 9e46338e88a8b719b269ac4f9fe837ba 166 SUPERFAMILY SSF46785 11 149 1.33E-31 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_00494 62f09ca8c700f126f77a7aab9ccc9294 515 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 279 285 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SYN_00494 62f09ca8c700f126f77a7aab9ccc9294 515 Gene3D G3DSA:1.20.1260.30 1 145 1.7E-46 T 11-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily SYN_00494 62f09ca8c700f126f77a7aab9ccc9294 515 Pfam PF02384 N-6 DNA Methylase 154 474 5.5E-118 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 SYN_00494 62f09ca8c700f126f77a7aab9ccc9294 515 Gene3D G3DSA:3.40.50.150 155 457 4.1E-122 T 11-10-2018 SYN_00494 62f09ca8c700f126f77a7aab9ccc9294 515 Pfam PF12161 HsdM N-terminal domain 12 140 1.6E-24 T 11-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain SYN_00494 62f09ca8c700f126f77a7aab9ccc9294 515 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 310 334 4.7E-20 T 11-10-2018 SYN_00494 62f09ca8c700f126f77a7aab9ccc9294 515 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 178 194 4.7E-20 T 11-10-2018 SYN_00494 62f09ca8c700f126f77a7aab9ccc9294 515 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 201 215 4.7E-20 T 11-10-2018 SYN_00494 62f09ca8c700f126f77a7aab9ccc9294 515 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 276 288 4.7E-20 T 11-10-2018 SYN_00494 62f09ca8c700f126f77a7aab9ccc9294 515 SUPERFAMILY SSF53335 11 513 1.12E-140 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_02088 009ce2690e2c1d55e9d89311aca92f4f 373 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 54 172 1.3E-20 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 SYN_02088 009ce2690e2c1d55e9d89311aca92f4f 373 Gene3D G3DSA:1.10.340.30 39 150 6.8E-87 T 11-10-2018 SYN_02088 009ce2690e2c1d55e9d89311aca92f4f 373 Gene3D G3DSA:1.10.1670.10 29 230 6.8E-87 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 SYN_02088 009ce2690e2c1d55e9d89311aca92f4f 373 Pfam PF00633 Helix-hairpin-helix motif 117 146 1.2E-5 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 SYN_02088 009ce2690e2c1d55e9d89311aca92f4f 373 SUPERFAMILY SSF55811 238 371 3.38E-36 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 SYN_02088 009ce2690e2c1d55e9d89311aca92f4f 373 Pfam PF14815 NUDIX domain 253 369 6.6E-19 T 11-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 SYN_02088 009ce2690e2c1d55e9d89311aca92f4f 373 SMART SM00478 57 208 8.4E-52 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 SYN_02088 009ce2690e2c1d55e9d89311aca92f4f 373 Gene3D G3DSA:3.90.79.10 250 373 1.1E-30 T 11-10-2018 SYN_02088 009ce2690e2c1d55e9d89311aca92f4f 373 SUPERFAMILY SSF48150 23 238 1.19E-73 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 SYN_02088 009ce2690e2c1d55e9d89311aca92f4f 373 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 28 282 6.3E-96 T 11-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 SYN_02851 0f1625572457c9464f55f735bc16be73 236 SMART SM00849 32 213 7.1E-29 T 11-10-2018 IPR001279 Metallo-beta-lactamase SYN_02851 0f1625572457c9464f55f735bc16be73 236 Pfam PF00753 Metallo-beta-lactamase superfamily 35 213 3.8E-24 T 11-10-2018 IPR001279 Metallo-beta-lactamase SYN_02851 0f1625572457c9464f55f735bc16be73 236 Gene3D G3DSA:3.60.15.10 2 235 6.4E-56 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_02851 0f1625572457c9464f55f735bc16be73 236 SUPERFAMILY SSF56281 10 233 1.14E-49 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_03108 d67a1511a5b29c0469accf934de2196f 197 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 33 177 1.0E-59 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 SYN_03108 d67a1511a5b29c0469accf934de2196f 197 SUPERFAMILY SSF54211 4 87 4.05E-30 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SYN_03108 d67a1511a5b29c0469accf934de2196f 197 Gene3D G3DSA:3.30.230.40 92 197 3.3E-37 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 SYN_03108 d67a1511a5b29c0469accf934de2196f 197 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 159 171 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 SYN_03108 d67a1511a5b29c0469accf934de2196f 197 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 63 76 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 SYN_03108 d67a1511a5b29c0469accf934de2196f 197 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 4 197 40.851 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 SYN_03108 d67a1511a5b29c0469accf934de2196f 197 SUPERFAMILY SSF54211 89 182 1.11E-32 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SYN_03108 d67a1511a5b29c0469accf934de2196f 197 Gene3D G3DSA:3.30.230.40 2 91 3.3E-33 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 SYN_00652 3b5f3e8c29dc0e79020938a751c34b3f 147 SMART SM00347 30 130 1.8E-23 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SYN_00652 3b5f3e8c29dc0e79020938a751c34b3f 147 Gene3D G3DSA:1.10.10.10 2 146 6.0E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_00652 3b5f3e8c29dc0e79020938a751c34b3f 147 Pfam PF01047 MarR family 37 94 8.1E-13 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SYN_00652 3b5f3e8c29dc0e79020938a751c34b3f 147 SUPERFAMILY SSF46785 11 142 2.28E-34 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_00652 3b5f3e8c29dc0e79020938a751c34b3f 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 54 70 5.7E-13 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SYN_00652 3b5f3e8c29dc0e79020938a751c34b3f 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 5.7E-13 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SYN_00652 3b5f3e8c29dc0e79020938a751c34b3f 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 5.7E-13 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SYN_00652 3b5f3e8c29dc0e79020938a751c34b3f 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 120 140 5.7E-13 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SYN_00458 e6db04f7886d506c7f5a720f35a20fa9 558 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 370 384 - T 11-10-2018 IPR001482 Type II/IV secretion system protein SYN_00458 e6db04f7886d506c7f5a720f35a20fa9 558 SUPERFAMILY SSF52540 160 558 3.56E-94 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00458 e6db04f7886d506c7f5a720f35a20fa9 558 SUPERFAMILY SSF160246 2 138 3.66E-21 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily SYN_00458 e6db04f7886d506c7f5a720f35a20fa9 558 Gene3D G3DSA:3.40.50.300 276 558 4.0E-106 T 11-10-2018 SYN_00458 e6db04f7886d506c7f5a720f35a20fa9 558 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 36 146 5.4E-12 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal SYN_00458 e6db04f7886d506c7f5a720f35a20fa9 558 Pfam PF00437 Type II/IV secretion system protein 179 442 1.0E-79 T 11-10-2018 IPR001482 Type II/IV secretion system protein SYN_00458 e6db04f7886d506c7f5a720f35a20fa9 558 Gene3D G3DSA:3.30.450.90 143 274 3.8E-45 T 11-10-2018 SYN_00307 da712f9ba0087a308390ee80df44faf3 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 95 1.7E-29 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SYN_00307 da712f9ba0087a308390ee80df44faf3 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 24.359 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SYN_00307 da712f9ba0087a308390ee80df44faf3 95 SUPERFAMILY SSF141000 2 93 2.62E-31 T 11-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 SYN_00307 da712f9ba0087a308390ee80df44faf3 95 Gene3D G3DSA:1.10.20.60 1 93 1.7E-31 T 11-10-2018 SYN_00307 da712f9ba0087a308390ee80df44faf3 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 90 3.2E-21 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SYN_01873 2bb2cad410872127a14ba91ae0e3e631 300 ProSitePatterns PS00194 Thioredoxin family active site. 183 201 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 SYN_01873 2bb2cad410872127a14ba91ae0e3e631 300 Gene3D G3DSA:3.40.30.10 162 264 8.2E-10 T 11-10-2018 SYN_01873 2bb2cad410872127a14ba91ae0e3e631 300 Pfam PF13728 F plasmid transfer operon protein 51 263 1.2E-58 T 11-10-2018 IPR039555 F plasmid transfer operon protein SYN_01873 2bb2cad410872127a14ba91ae0e3e631 300 SUPERFAMILY SSF52833 168 262 9.16E-13 T 11-10-2018 IPR036249 Thioredoxin-like superfamily SYN_01767 6d56d8dff868aa6dfccf2e1b92c9c188 63 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 9 55 12.33 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01767 6d56d8dff868aa6dfccf2e1b92c9c188 63 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 13 40 1.0E-4 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01767 6d56d8dff868aa6dfccf2e1b92c9c188 63 PRINTS PR00976 Ribosomal protein S21 family signature 11 20 2.8E-5 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01767 6d56d8dff868aa6dfccf2e1b92c9c188 63 PRINTS PR00976 Ribosomal protein S21 family signature 23 33 2.8E-5 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01767 6d56d8dff868aa6dfccf2e1b92c9c188 63 PRINTS PR00976 Ribosomal protein S21 family signature 35 45 2.8E-5 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01767 6d56d8dff868aa6dfccf2e1b92c9c188 63 Gene3D G3DSA:1.20.5.1150 14 52 1.8E-9 T 11-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01767 6d56d8dff868aa6dfccf2e1b92c9c188 63 Pfam PF01165 Ribosomal protein S21 2 53 3.6E-19 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01767 6d56d8dff868aa6dfccf2e1b92c9c188 63 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 56 2.0E-17 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01444 6dc2e6e16ef6b5b9f034d203cc80159d 272 SUPERFAMILY SSF75217 109 264 5.69E-35 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases SYN_01444 6dc2e6e16ef6b5b9f034d203cc80159d 272 Gene3D G3DSA:3.40.1280.10 109 270 3.1E-38 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SYN_01444 6dc2e6e16ef6b5b9f034d203cc80159d 272 Gene3D G3DSA:3.30.1330.30 8 106 6.7E-12 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like SYN_01444 6dc2e6e16ef6b5b9f034d203cc80159d 272 SMART SM00967 36 109 1.5E-5 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 SYN_01444 6dc2e6e16ef6b5b9f034d203cc80159d 272 Pfam PF00588 SpoU rRNA Methylase family 124 259 4.1E-28 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SYN_01444 6dc2e6e16ef6b5b9f034d203cc80159d 272 SUPERFAMILY SSF55315 9 102 3.53E-14 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like SYN_01600 0f60b4010f5255c761a67ba5955def37 209 SMART SM01390 3 98 4.7E-51 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 SYN_01600 0f60b4010f5255c761a67ba5955def37 209 Gene3D G3DSA:3.10.290.10 98 194 1.4E-86 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 SYN_01600 0f60b4010f5255c761a67ba5955def37 209 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 98 5.0E-30 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 SYN_01600 0f60b4010f5255c761a67ba5955def37 209 Gene3D G3DSA:1.10.1050.10 7 209 1.4E-86 T 11-10-2018 SYN_01600 0f60b4010f5255c761a67ba5955def37 209 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 209 1.8E-74 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 SYN_01600 0f60b4010f5255c761a67ba5955def37 209 SUPERFAMILY SSF55174 3 209 2.62E-72 T 11-10-2018 SYN_01600 0f60b4010f5255c761a67ba5955def37 209 Pfam PF01479 S4 domain 99 146 1.1E-18 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_01600 0f60b4010f5255c761a67ba5955def37 209 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 209 35.951 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 SYN_01600 0f60b4010f5255c761a67ba5955def37 209 SMART SM00363 99 157 1.3E-17 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_01600 0f60b4010f5255c761a67ba5955def37 209 ProSitePatterns PS00632 Ribosomal protein S4 signature. 97 121 - T 11-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_01372 272cd67212d199cea2a0ea5c08e815c2 420 TIGRFAM TIGR03918 GTP_HydF: [FeFe] hydrogenase H-cluster maturation GTPase HydF 6 399 4.4E-165 T 11-10-2018 IPR023873 [FeFe]-hydrogenase H-cluster maturation GTPase HydF SYN_01372 272cd67212d199cea2a0ea5c08e815c2 420 Gene3D G3DSA:3.40.50.300 3 175 2.6E-36 T 11-10-2018 SYN_01372 272cd67212d199cea2a0ea5c08e815c2 420 Gene3D G3DSA:3.40.50.11420 186 294 2.2E-39 T 11-10-2018 SYN_01372 272cd67212d199cea2a0ea5c08e815c2 420 SUPERFAMILY SSF52540 8 171 1.4E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01372 272cd67212d199cea2a0ea5c08e815c2 420 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 165 3.1E-21 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 SYN_01372 272cd67212d199cea2a0ea5c08e815c2 420 Pfam PF01926 50S ribosome-binding GTPase 14 127 3.9E-18 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 SYN_01372 272cd67212d199cea2a0ea5c08e815c2 420 Gene3D G3DSA:3.40.50.11410 295 403 2.1E-45 T 11-10-2018 SYN_03008 8b934ab256c6983f247e47c85a88a572 184 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 43 174 3.1E-40 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type SYN_03008 8b934ab256c6983f247e47c85a88a572 184 SUPERFAMILY SSF46785 44 176 1.27E-37 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_03008 8b934ab256c6983f247e47c85a88a572 184 Pfam PF02082 Transcriptional regulator 43 125 1.6E-28 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type SYN_03008 8b934ab256c6983f247e47c85a88a572 184 Gene3D G3DSA:1.10.10.10 39 184 7.4E-52 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_03008 8b934ab256c6983f247e47c85a88a572 184 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 91 109 - T 11-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site SYN_01401 7bed42907e2479540db76e7cdd993778 234 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 7 227 5.3E-74 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 SYN_01401 7bed42907e2479540db76e7cdd993778 234 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 4 227 42.855 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 SYN_01401 7bed42907e2479540db76e7cdd993778 234 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 104 111 - T 11-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 SYN_01401 7bed42907e2479540db76e7cdd993778 234 SUPERFAMILY SSF53448 4 228 2.5E-63 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_01401 7bed42907e2479540db76e7cdd993778 234 Gene3D G3DSA:3.90.550.10 3 233 7.0E-82 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_01401 7bed42907e2479540db76e7cdd993778 234 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 228 1.8E-67 T 11-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 SYN_02436 8e98d266e7349bb298af4c72ba17a80c 326 Pfam PF01207 Dihydrouridine synthase (Dus) 14 318 3.1E-95 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SYN_02436 8e98d266e7349bb298af4c72ba17a80c 326 SUPERFAMILY SSF51395 11 319 5.49E-86 T 11-10-2018 SYN_02436 8e98d266e7349bb298af4c72ba17a80c 326 Gene3D G3DSA:1.10.1200.80 253 324 1.0E-14 T 11-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 SYN_02436 8e98d266e7349bb298af4c72ba17a80c 326 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 95 113 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 SYN_02436 8e98d266e7349bb298af4c72ba17a80c 326 Gene3D G3DSA:3.20.20.70 8 249 8.0E-86 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_02436 8e98d266e7349bb298af4c72ba17a80c 326 PIRSF PIRSF006621 1 326 2.9E-102 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SYN_02436 8e98d266e7349bb298af4c72ba17a80c 326 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 4 319 2.4E-111 T 11-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 SYN_00918 5e813c3db119c8917a6805a8fa6e1c68 261 SUPERFAMILY SSF64005 16 243 1.7E-88 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 SYN_00918 5e813c3db119c8917a6805a8fa6e1c68 261 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 21 249 40.493 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 SYN_00918 5e813c3db119c8917a6805a8fa6e1c68 261 Pfam PF01255 Putative undecaprenyl diphosphate synthase 28 248 1.5E-82 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 SYN_00918 5e813c3db119c8917a6805a8fa6e1c68 261 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 21 248 9.7E-90 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 SYN_00918 5e813c3db119c8917a6805a8fa6e1c68 261 Gene3D G3DSA:3.40.1180.10 4 249 3.2E-98 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 SYN_01968 af4c2eee03e68a2a0a4e1d8c6d62be5b 459 Pfam PF01554 MatE 23 181 3.8E-25 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 SYN_01968 af4c2eee03e68a2a0a4e1d8c6d62be5b 459 Pfam PF01554 MatE 248 405 2.5E-17 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 SYN_01968 af4c2eee03e68a2a0a4e1d8c6d62be5b 459 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 420 1.1E-58 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 SYN_01968 af4c2eee03e68a2a0a4e1d8c6d62be5b 459 PIRSF PIRSF006603 1 456 4.8E-91 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 SYN_03194 b7ed1ed9e8d2efe0f9e967817d0cba58 85 Pfam PF09656 Putative transmembrane protein (PGPGW) 12 60 1.1E-5 T 11-10-2018 IPR019099 Uncharacterised protein family PGPGW, transmembrane SYN_02754 9d2e911540c03d0736f113efd0f11537 881 Pfam PF13476 AAA domain 275 533 2.2E-7 T 11-10-2018 IPR038729 Rad50/SbcC-type AAA domain SYN_02754 9d2e911540c03d0736f113efd0f11537 881 SUPERFAMILY SSF89550 39 148 1.29E-7 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 SYN_02754 9d2e911540c03d0736f113efd0f11537 881 Gene3D G3DSA:3.40.50.300 265 496 7.9E-11 T 11-10-2018 SYN_02754 9d2e911540c03d0736f113efd0f11537 881 SUPERFAMILY SSF52540 272 827 1.95E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02754 9d2e911540c03d0736f113efd0f11537 881 Gene3D G3DSA:3.20.20.140 31 216 9.1E-12 T 11-10-2018 SYN_02367 cd6622971f57158b070f0e046461ff8f 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 3 411 53.025 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 SYN_02367 cd6622971f57158b070f0e046461ff8f 417 Pfam PF00464 Serine hydroxymethyltransferase 5 380 4.3E-171 T 11-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 SYN_02367 cd6622971f57158b070f0e046461ff8f 417 SUPERFAMILY SSF53383 2 410 1.58E-179 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SYN_02367 cd6622971f57158b070f0e046461ff8f 417 PIRSF PIRSF000412 1 415 7.5E-167 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 SYN_02367 cd6622971f57158b070f0e046461ff8f 417 Gene3D G3DSA:3.90.1150.10 6 391 1.1E-186 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SYN_02367 cd6622971f57158b070f0e046461ff8f 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 218 234 - T 11-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 SYN_02367 cd6622971f57158b070f0e046461ff8f 417 Gene3D G3DSA:3.40.640.10 33 283 1.1E-186 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SYN_00803 d9c4af37cab43d0c63532eaff4a064ae 428 Pfam PF09338 Glycine/sarcosine/betaine reductase component B subunits 3 426 3.9E-183 T 11-10-2018 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta GO:0050485|GO:0055114 SYN_00803 d9c4af37cab43d0c63532eaff4a064ae 428 PIRSF PIRSF011588 1 428 2.0E-200 T 11-10-2018 IPR016585 Glycine/sarcosine/betaine reductase, component B, fused alpha/beta GO:0050485|GO:0055114 SYN_02156 2d29edd26a4d31fa1aaa169863f9cd94 302 Gene3D G3DSA:3.40.50.1370 4 299 3.6E-114 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 SYN_02156 2d29edd26a4d31fa1aaa169863f9cd94 302 SUPERFAMILY SSF53671 2 301 1.22E-103 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 SYN_02156 2d29edd26a4d31fa1aaa169863f9cd94 302 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 48 55 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SYN_02156 2d29edd26a4d31fa1aaa169863f9cd94 302 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 151 299 4.9E-53 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 SYN_02156 2d29edd26a4d31fa1aaa169863f9cd94 302 Gene3D G3DSA:3.40.50.1370 133 289 3.6E-114 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 SYN_02156 2d29edd26a4d31fa1aaa169863f9cd94 302 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 3 301 9.2E-120 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 SYN_02156 2d29edd26a4d31fa1aaa169863f9cd94 302 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 3 143 3.7E-46 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 SYN_02156 2d29edd26a4d31fa1aaa169863f9cd94 302 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 48 67 3.1E-27 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SYN_02156 2d29edd26a4d31fa1aaa169863f9cd94 302 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 130 141 3.1E-27 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SYN_02156 2d29edd26a4d31fa1aaa169863f9cd94 302 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 255 264 3.1E-27 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SYN_02156 2d29edd26a4d31fa1aaa169863f9cd94 302 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 290 3.1E-27 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SYN_02156 2d29edd26a4d31fa1aaa169863f9cd94 302 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 2 302 79.605 T 11-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SYN_02156 2d29edd26a4d31fa1aaa169863f9cd94 302 PRINTS PR00102 Ornithine carbamoyltransferase signature 119 133 1.1E-29 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 SYN_02156 2d29edd26a4d31fa1aaa169863f9cd94 302 PRINTS PR00102 Ornithine carbamoyltransferase signature 281 292 1.1E-29 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 SYN_02156 2d29edd26a4d31fa1aaa169863f9cd94 302 PRINTS PR00102 Ornithine carbamoyltransferase signature 219 229 1.1E-29 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 SYN_02156 2d29edd26a4d31fa1aaa169863f9cd94 302 PRINTS PR00102 Ornithine carbamoyltransferase signature 79 92 1.1E-29 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 SYN_02156 2d29edd26a4d31fa1aaa169863f9cd94 302 PRINTS PR00102 Ornithine carbamoyltransferase signature 46 60 1.1E-29 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 SYN_01064 bd88a44624496228aeff38edc212aae5 204 Pfam PF00691 OmpA family 102 197 1.2E-17 T 11-10-2018 IPR006665 OmpA-like domain SYN_01064 bd88a44624496228aeff38edc212aae5 204 SUPERFAMILY SSF103088 96 203 6.15E-26 T 11-10-2018 IPR036737 OmpA-like domain superfamily SYN_01064 bd88a44624496228aeff38edc212aae5 204 PRINTS PR01021 OMPA domain signature 148 164 6.3E-8 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SYN_01064 bd88a44624496228aeff38edc212aae5 204 PRINTS PR01021 OMPA domain signature 133 148 6.3E-8 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 SYN_01064 bd88a44624496228aeff38edc212aae5 204 Gene3D G3DSA:3.30.1330.60 90 203 8.7E-26 T 11-10-2018 IPR036737 OmpA-like domain superfamily SYN_03110 3e2b7f02a588f04d1b47fefb5cab66b3 123 SUPERFAMILY SSF141734 4 115 7.72E-50 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 SYN_03110 3e2b7f02a588f04d1b47fefb5cab66b3 123 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 27 100 3.9E-35 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 SYN_03110 3e2b7f02a588f04d1b47fefb5cab66b3 123 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 1 104 32.32 T 11-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 SYN_03110 3e2b7f02a588f04d1b47fefb5cab66b3 123 Gene3D G3DSA:3.10.20.400 3 91 1.1E-39 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 SYN_03110 3e2b7f02a588f04d1b47fefb5cab66b3 123 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 51 103 2.0E-18 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 SYN_03315 cec322d3eeeb239f070340d38362cc2d 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.435 T 11-10-2018 IPR023053 Ribosomal protein S14, type Z SYN_03315 cec322d3eeeb239f070340d38362cc2d 61 Pfam PF00253 Ribosomal protein S14p/S29e 10 60 3.4E-24 T 11-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_03315 cec322d3eeeb239f070340d38362cc2d 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 11-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_03315 cec322d3eeeb239f070340d38362cc2d 61 SUPERFAMILY SSF57716 4 61 5.42E-21 T 11-10-2018 SYN_03315 cec322d3eeeb239f070340d38362cc2d 61 Gene3D G3DSA:4.10.830.10 1 61 9.5E-30 T 11-10-2018 SYN_00349 ef7451d41bd09d7b109e4862d694f0e4 306 Gene3D G3DSA:2.160.20.100 32 85 5.4E-16 T 11-10-2018 SYN_00349 ef7451d41bd09d7b109e4862d694f0e4 306 Pfam PF00805 Pentapeptide repeats (8 copies) 239 278 1.0E-12 T 11-10-2018 IPR001646 Pentapeptide repeat SYN_00349 ef7451d41bd09d7b109e4862d694f0e4 306 Pfam PF00805 Pentapeptide repeats (8 copies) 200 237 6.7E-13 T 11-10-2018 IPR001646 Pentapeptide repeat SYN_00349 ef7451d41bd09d7b109e4862d694f0e4 306 Pfam PF00805 Pentapeptide repeats (8 copies) 69 106 4.1E-12 T 11-10-2018 IPR001646 Pentapeptide repeat SYN_00349 ef7451d41bd09d7b109e4862d694f0e4 306 Pfam PF00805 Pentapeptide repeats (8 copies) 145 183 4.0E-14 T 11-10-2018 IPR001646 Pentapeptide repeat SYN_00349 ef7451d41bd09d7b109e4862d694f0e4 306 Gene3D G3DSA:2.160.20.80 138 217 2.6E-26 T 11-10-2018 SYN_00349 ef7451d41bd09d7b109e4862d694f0e4 306 SUPERFAMILY SSF141571 163 304 4.4E-43 T 11-10-2018 SYN_00349 ef7451d41bd09d7b109e4862d694f0e4 306 Gene3D G3DSA:2.160.20.100 86 137 8.5E-15 T 11-10-2018 SYN_00349 ef7451d41bd09d7b109e4862d694f0e4 306 Gene3D G3DSA:2.160.20.80 218 306 2.4E-27 T 11-10-2018 SYN_00349 ef7451d41bd09d7b109e4862d694f0e4 306 SUPERFAMILY SSF141571 35 183 5.36E-42 T 11-10-2018 SYN_02770 1bc2bc594bd65e3a32602570e8a94531 814 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 54 778 20.816 T 11-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 SYN_02770 1bc2bc594bd65e3a32602570e8a94531 814 PIRSF PIRSF001265 52 787 4.5E-163 T 11-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 SYN_02770 1bc2bc594bd65e3a32602570e8a94531 814 Pfam PF03030 Inorganic H+ pyrophosphatase 65 772 2.5E-175 T 11-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 SYN_03000 56014159d54dff5653f2e43b6dd7caa1 204 Pfam PF12766 Pyridoxamine 5'-phosphate oxidase 23 106 3.2E-15 T 11-10-2018 IPR024624 Pyridoxamine 5'-phosphate oxidase, Alr4036 family, FMN-binding domain GO:0010181 SYN_03000 56014159d54dff5653f2e43b6dd7caa1 204 SUPERFAMILY SSF50475 11 204 1.87E-30 T 11-10-2018 SYN_03000 56014159d54dff5653f2e43b6dd7caa1 204 Gene3D G3DSA:2.30.110.10 7 204 3.6E-40 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 SYN_01762 995b676b7749bae5805849aa00b53eaf 555 Gene3D G3DSA:3.40.50.300 386 551 5.4E-37 T 11-10-2018 SYN_01762 995b676b7749bae5805849aa00b53eaf 555 Pfam PF16360 GTP-binding GTPase Middle Region 303 381 9.4E-27 T 11-10-2018 IPR032305 GTP-binding protein, middle domain SYN_01762 995b676b7749bae5805849aa00b53eaf 555 Pfam PF13167 GTP-binding GTPase N-terminal 214 301 1.1E-27 T 11-10-2018 IPR025121 GTPase HflX, N-terminal SYN_01762 995b676b7749bae5805849aa00b53eaf 555 SUPERFAMILY SSF52540 386 548 3.3E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01762 995b676b7749bae5805849aa00b53eaf 555 Hamap MF_00900 GTPase HflX [hflX]. 216 555 42.61 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 SYN_01762 995b676b7749bae5805849aa00b53eaf 555 Pfam PF01926 50S ribosome-binding GTPase 389 507 1.4E-19 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 SYN_01762 995b676b7749bae5805849aa00b53eaf 555 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 456 474 1.2E-7 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 SYN_01762 995b676b7749bae5805849aa00b53eaf 555 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 389 409 1.2E-7 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 SYN_01762 995b676b7749bae5805849aa00b53eaf 555 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 198 547 4.4E-133 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 SYN_01762 995b676b7749bae5805849aa00b53eaf 555 Gene3D G3DSA:3.40.50.11060 205 328 4.7E-37 T 11-10-2018 SYN_01690 e493233440170c47ac6d28e834a6cf0e 269 Pfam PF02405 Permease MlaE 55 263 9.7E-45 T 11-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 SYN_00032 f313cac336724c7fe35f321ec0fd32b2 625 SUPERFAMILY SSF47090 278 358 1.18E-15 T 11-10-2018 IPR036365 PGBD-like superfamily SYN_00032 f313cac336724c7fe35f321ec0fd32b2 625 Pfam PF01471 Putative peptidoglycan binding domain 292 347 6.0E-11 T 11-10-2018 IPR002477 Peptidoglycan binding-like SYN_00032 f313cac336724c7fe35f321ec0fd32b2 625 SUPERFAMILY SSF141523 375 534 2.75E-18 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like SYN_00032 f313cac336724c7fe35f321ec0fd32b2 625 Pfam PF03734 L,D-transpeptidase catalytic domain 377 544 1.4E-28 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 SYN_02632 21db1f991bfbd76cf9b938f3ef671260 432 SUPERFAMILY SSF53955 50 352 1.42E-92 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily SYN_02632 21db1f991bfbd76cf9b938f3ef671260 432 Pfam PF13406 Transglycosylase SLT domain 55 347 3.6E-102 T 11-10-2018 IPR031304 Transglycosylase SLT domain 2 SYN_02632 21db1f991bfbd76cf9b938f3ef671260 432 Gene3D G3DSA:1.10.8.350 67 231 1.4E-79 T 11-10-2018 SYN_02632 21db1f991bfbd76cf9b938f3ef671260 432 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 55 351 2.8E-104 T 11-10-2018 IPR011970 Lytic murein transglycosylase SYN_02632 21db1f991bfbd76cf9b938f3ef671260 432 Gene3D G3DSA:1.10.530.10 98 346 1.4E-79 T 11-10-2018 SYN_02632 21db1f991bfbd76cf9b938f3ef671260 432 SUPERFAMILY SSF47090 365 424 3.61E-15 T 11-10-2018 IPR036365 PGBD-like superfamily SYN_02632 21db1f991bfbd76cf9b938f3ef671260 432 Pfam PF01471 Putative peptidoglycan binding domain 369 423 5.6E-14 T 11-10-2018 IPR002477 Peptidoglycan binding-like SYN_02632 21db1f991bfbd76cf9b938f3ef671260 432 Gene3D G3DSA:1.10.101.10 358 428 8.6E-14 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 SYN_00695 e4de8e7b39c474f529fa23bed0211517 364 Gene3D G3DSA:1.10.150.130 55 166 8.2E-18 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal SYN_00695 e4de8e7b39c474f529fa23bed0211517 364 Gene3D G3DSA:1.10.443.10 167 339 6.0E-39 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 SYN_00695 e4de8e7b39c474f529fa23bed0211517 364 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 60 111 1.6E-7 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SYN_00695 e4de8e7b39c474f529fa23bed0211517 364 Pfam PF00589 Phage integrase family 166 324 9.3E-34 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SYN_00695 e4de8e7b39c474f529fa23bed0211517 364 SUPERFAMILY SSF56349 60 332 1.03E-64 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SYN_00964 35f9060b0f7344f38c15736011094903 343 Gene3D G3DSA:3.40.50.180 151 343 1.8E-74 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal SYN_00964 35f9060b0f7344f38c15736011094903 343 SMART SM00448 4 125 8.6E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00964 35f9060b0f7344f38c15736011094903 343 SUPERFAMILY SSF52738 158 342 1.57E-70 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal SYN_00964 35f9060b0f7344f38c15736011094903 343 SUPERFAMILY SSF52172 1 112 1.24E-25 T 11-10-2018 IPR011006 CheY-like superfamily SYN_00964 35f9060b0f7344f38c15736011094903 343 Pfam PF01339 CheB methylesterase 161 339 6.1E-61 T 11-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SYN_00964 35f9060b0f7344f38c15736011094903 343 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 343 39.323 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SYN_00964 35f9060b0f7344f38c15736011094903 343 PIRSF PIRSF000876 1 343 4.5E-131 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 SYN_00964 35f9060b0f7344f38c15736011094903 343 Gene3D G3DSA:3.40.50.2300 1 131 2.6E-27 T 11-10-2018 SYN_00964 35f9060b0f7344f38c15736011094903 343 Pfam PF00072 Response regulator receiver domain 6 109 9.7E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_01200 dd3cddefc3f9212f06404473e11d2276 321 Pfam PF01226 Formate/nitrite transporter 54 309 1.2E-77 T 11-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 SYN_01200 dd3cddefc3f9212f06404473e11d2276 321 Gene3D G3DSA:1.20.1080.10 50 319 5.5E-80 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 SYN_00438 9196a6976679389e4f48d7ef619bd6c1 210 TIGRFAM TIGR02354 thiF_fam2: thiamine biosynthesis protein ThiF 9 202 1.1E-46 T 11-10-2018 IPR012729 Thiamine biosynthesis protein ThiF SYN_00438 9196a6976679389e4f48d7ef619bd6c1 210 SUPERFAMILY SSF69572 11 206 7.72E-35 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 SYN_00438 9196a6976679389e4f48d7ef619bd6c1 210 Gene3D G3DSA:3.40.50.720 7 196 4.6E-34 T 11-10-2018 SYN_00438 9196a6976679389e4f48d7ef619bd6c1 210 Pfam PF00899 ThiF family 15 134 7.5E-26 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SYN_01534 f88f348ff4494d514d7e7cb2550ae9f1 459 Gene3D G3DSA:1.25.60.10 12 138 2.1E-27 T 11-10-2018 IPR038076 MgtE, N-terminal domain superfamily SYN_01534 f88f348ff4494d514d7e7cb2550ae9f1 459 Pfam PF03448 MgtE intracellular N domain 40 141 2.1E-28 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain SYN_01534 f88f348ff4494d514d7e7cb2550ae9f1 459 SUPERFAMILY SSF161093 285 455 1.7E-50 T 11-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 SYN_01534 f88f348ff4494d514d7e7cb2550ae9f1 459 SUPERFAMILY SSF54631 142 279 8.97E-28 T 11-10-2018 SYN_01534 f88f348ff4494d514d7e7cb2550ae9f1 459 SMART SM00116 214 262 0.012 T 11-10-2018 IPR000644 CBS domain SYN_01534 f88f348ff4494d514d7e7cb2550ae9f1 459 SMART SM00116 150 203 0.24 T 11-10-2018 IPR000644 CBS domain SYN_01534 f88f348ff4494d514d7e7cb2550ae9f1 459 Pfam PF01769 Divalent cation transporter 327 448 3.8E-27 T 11-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 SYN_01534 f88f348ff4494d514d7e7cb2550ae9f1 459 SMART SM00924 40 143 3.4E-35 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain SYN_01534 f88f348ff4494d514d7e7cb2550ae9f1 459 TIGRFAM TIGR00400 mgtE: magnesium transporter 24 456 2.9E-104 T 11-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 SYN_01534 f88f348ff4494d514d7e7cb2550ae9f1 459 Pfam PF00571 CBS domain 213 261 2.6E-5 T 11-10-2018 IPR000644 CBS domain SYN_01534 f88f348ff4494d514d7e7cb2550ae9f1 459 Pfam PF00571 CBS domain 144 201 4.8E-4 T 11-10-2018 IPR000644 CBS domain SYN_01534 f88f348ff4494d514d7e7cb2550ae9f1 459 Gene3D G3DSA:1.10.357.20 282 456 4.5E-53 T 11-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain SYN_01534 f88f348ff4494d514d7e7cb2550ae9f1 459 SUPERFAMILY SSF158791 15 140 1.83E-29 T 11-10-2018 SYN_01534 f88f348ff4494d514d7e7cb2550ae9f1 459 Gene3D G3DSA:3.10.580.10 139 266 3.5E-39 T 11-10-2018 SYN_02128 e2c9131656912893304e283ca61f27ed 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 131 227 1.7E-21 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 SYN_02128 e2c9131656912893304e283ca61f27ed 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 17 127 2.6E-35 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 SYN_02128 e2c9131656912893304e283ca61f27ed 389 PIRSF PIRSF016578 7 93 7.4E-5 T 11-10-2018 SYN_02128 e2c9131656912893304e283ca61f27ed 389 PIRSF PIRSF016578 242 388 6.9E-7 T 11-10-2018 SYN_02128 e2c9131656912893304e283ca61f27ed 389 PIRSF PIRSF016578 141 199 130.0 T 11-10-2018 SYN_02128 e2c9131656912893304e283ca61f27ed 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 346 365 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 SYN_02128 e2c9131656912893304e283ca61f27ed 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 239 387 1.8E-42 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SYN_02128 e2c9131656912893304e283ca61f27ed 389 SUPERFAMILY SSF56645 15 252 7.07E-80 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 SYN_02128 e2c9131656912893304e283ca61f27ed 389 SUPERFAMILY SSF47203 238 387 1.19E-49 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 SYN_02128 e2c9131656912893304e283ca61f27ed 389 Gene3D G3DSA:1.20.140.10 245 388 6.5E-48 T 11-10-2018 SYN_02128 e2c9131656912893304e283ca61f27ed 389 Gene3D G3DSA:1.10.540.10 6 129 3.2E-38 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 SYN_02128 e2c9131656912893304e283ca61f27ed 389 Gene3D G3DSA:2.40.110.10 130 244 4.2E-36 T 11-10-2018 SYN_01844 40f9df01d7aa31a51cb1c3b5221aef40 592 Pfam PF01935 Domain of unknown function DUF87 178 351 1.8E-12 T 11-10-2018 IPR002789 Helicase HerA, central domain SYN_01844 40f9df01d7aa31a51cb1c3b5221aef40 592 Gene3D G3DSA:3.40.50.300 176 229 6.2E-8 T 11-10-2018 SYN_01844 40f9df01d7aa31a51cb1c3b5221aef40 592 SMART SM00382 175 528 0.0018 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01844 40f9df01d7aa31a51cb1c3b5221aef40 592 SUPERFAMILY SSF52540 176 508 1.82E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01844 40f9df01d7aa31a51cb1c3b5221aef40 592 Gene3D G3DSA:3.40.50.300 380 534 9.9E-13 T 11-10-2018 SYN_01844 40f9df01d7aa31a51cb1c3b5221aef40 592 Gene3D G3DSA:1.10.8.730 230 280 6.2E-8 T 11-10-2018 SYN_01825 6cb780ff2e91c9f8658ee2b525b173b3 643 Pfam PF01555 DNA methylase 122 459 3.9E-38 T 11-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 SYN_01825 6cb780ff2e91c9f8658ee2b525b173b3 643 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 122 134 1.6E-14 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 SYN_01825 6cb780ff2e91c9f8658ee2b525b173b3 643 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 430 444 1.6E-14 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 SYN_01825 6cb780ff2e91c9f8658ee2b525b173b3 643 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 407 429 1.6E-14 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 SYN_01825 6cb780ff2e91c9f8658ee2b525b173b3 643 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 185 204 1.6E-14 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 SYN_01825 6cb780ff2e91c9f8658ee2b525b173b3 643 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 125 131 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SYN_01825 6cb780ff2e91c9f8658ee2b525b173b3 643 SUPERFAMILY SSF53335 89 483 3.87E-61 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_01825 6cb780ff2e91c9f8658ee2b525b173b3 643 PIRSF PIRSF015855 1 643 7.6E-193 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 SYN_00953 597159436b4f21d20618365acdef39fd 151 SUPERFAMILY SSF46785 9 141 2.93E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_00953 597159436b4f21d20618365acdef39fd 151 Gene3D G3DSA:1.10.10.10 8 88 1.2E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_00953 597159436b4f21d20618365acdef39fd 151 Gene3D G3DSA:3.30.1490.190 92 148 3.3E-6 T 11-10-2018 SYN_00953 597159436b4f21d20618365acdef39fd 151 Pfam PF01475 Ferric uptake regulator family 17 106 4.8E-16 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 SYN_01142 ce0eb8cd84c8e75c0bb6f08a791f5124 397 Gene3D G3DSA:3.40.50.2000 2 175 5.4E-14 T 11-10-2018 SYN_01142 ce0eb8cd84c8e75c0bb6f08a791f5124 397 Pfam PF00534 Glycosyl transferases group 1 181 349 1.6E-23 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 SYN_01142 ce0eb8cd84c8e75c0bb6f08a791f5124 397 SUPERFAMILY SSF53756 4 372 4.19E-67 T 11-10-2018 SYN_01142 ce0eb8cd84c8e75c0bb6f08a791f5124 397 Pfam PF13439 Glycosyltransferase Family 4 14 167 1.1E-10 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 SYN_01142 ce0eb8cd84c8e75c0bb6f08a791f5124 397 Gene3D G3DSA:3.40.50.2000 178 354 4.6E-34 T 11-10-2018 SYN_03192 63c102fa238b97a0e381dca4cd974c80 194 Pfam PF02811 PHP domain 3 93 4.1E-7 T 11-10-2018 IPR004013 PHP domain GO:0003824 SYN_03192 63c102fa238b97a0e381dca4cd974c80 194 SMART SM00481 2 75 3.3E-15 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal SYN_03192 63c102fa238b97a0e381dca4cd974c80 194 SUPERFAMILY SSF89550 2 186 6.67E-32 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 SYN_03192 63c102fa238b97a0e381dca4cd974c80 194 Gene3D G3DSA:3.20.20.140 1 191 1.1E-25 T 11-10-2018 SYN_01269 af95c74500a6b3a30a0aacb19be75229 362 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 39 149 9.0E-26 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SYN_01269 af95c74500a6b3a30a0aacb19be75229 362 Pfam PF00107 Zinc-binding dehydrogenase 191 302 6.7E-20 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SYN_01269 af95c74500a6b3a30a0aacb19be75229 362 Gene3D G3DSA:3.90.180.10 27 345 6.8E-93 T 11-10-2018 SYN_01269 af95c74500a6b3a30a0aacb19be75229 362 SUPERFAMILY SSF50129 13 190 3.09E-50 T 11-10-2018 IPR011032 GroES-like superfamily SYN_01269 af95c74500a6b3a30a0aacb19be75229 362 Gene3D G3DSA:3.40.50.720 169 304 6.8E-93 T 11-10-2018 SYN_01269 af95c74500a6b3a30a0aacb19be75229 362 SUPERFAMILY SSF51735 154 324 4.06E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_01051 ec17274b815319eff71df8fa6b0c6040 351 Gene3D G3DSA:3.40.50.1980 24 348 2.1E-65 T 11-10-2018 SYN_01051 ec17274b815319eff71df8fa6b0c6040 351 SUPERFAMILY SSF53807 36 351 1.02E-66 T 11-10-2018 SYN_01051 ec17274b815319eff71df8fa6b0c6040 351 Pfam PF01497 Periplasmic binding protein 81 286 5.2E-13 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain SYN_02271 f05c18c9e6b2f6d45356011c45b5ff1b 323 Pfam PF04463 Protein of unknown function (DUF523) 10 150 1.8E-30 T 11-10-2018 IPR007553 Domain of unknown function DUF523 SYN_02271 f05c18c9e6b2f6d45356011c45b5ff1b 323 PIRSF PIRSF037004 1 317 1.1E-106 T 11-10-2018 IPR017087 Uncharacterised conserved protein UCP037004 SYN_02271 f05c18c9e6b2f6d45356011c45b5ff1b 323 Pfam PF08349 Protein of unknown function (DUF1722) 192 308 3.1E-38 T 11-10-2018 IPR013560 Domain of unknown function DUF1722 SYN_00817 52cbc7cc6c2d59fcf7a61b3c52ca6553 415 SUPERFAMILY SSF53756 28 403 5.1E-81 T 11-10-2018 SYN_00817 52cbc7cc6c2d59fcf7a61b3c52ca6553 415 Gene3D G3DSA:3.40.50.2000 204 386 2.5E-45 T 11-10-2018 SYN_00817 52cbc7cc6c2d59fcf7a61b3c52ca6553 415 Pfam PF00534 Glycosyl transferases group 1 220 378 1.1E-38 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 SYN_00817 52cbc7cc6c2d59fcf7a61b3c52ca6553 415 Pfam PF13439 Glycosyltransferase Family 4 26 204 3.0E-20 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 SYN_00817 52cbc7cc6c2d59fcf7a61b3c52ca6553 415 Gene3D G3DSA:3.40.50.2000 3 203 4.0E-32 T 11-10-2018 SYN_02862 84a33b4298758623e01c72d929c9465c 560 Gene3D G3DSA:3.40.50.300 273 556 1.8E-59 T 11-10-2018 SYN_02862 84a33b4298758623e01c72d929c9465c 560 Gene3D G3DSA:3.40.50.300 1 272 5.6E-45 T 11-10-2018 SYN_02862 84a33b4298758623e01c72d929c9465c 560 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 513 4.2E-16 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal SYN_02862 84a33b4298758623e01c72d929c9465c 560 PIRSF PIRSF003128 1 560 3.3E-175 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 SYN_02862 84a33b4298758623e01c72d929c9465c 560 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 555 1.6E-160 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 SYN_02862 84a33b4298758623e01c72d929c9465c 560 SUPERFAMILY SSF52540 1 516 5.41E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02647 e49e21bdd123cbe4b2ffbc2b549179b8 292 Pfam PF00483 Nucleotidyl transferase 4 240 2.6E-70 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 SYN_02647 e49e21bdd123cbe4b2ffbc2b549179b8 292 Gene3D G3DSA:3.90.550.10 1 292 1.4E-84 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_02647 e49e21bdd123cbe4b2ffbc2b549179b8 292 SUPERFAMILY SSF53448 2 289 1.55E-89 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_02647 e49e21bdd123cbe4b2ffbc2b549179b8 292 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 4 288 1.4E-149 T 11-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 SYN_01786 111a9f6dde30e90c8b0c0901bb941e72 112 SUPERFAMILY SSF103007 1 95 2.35E-28 T 11-10-2018 IPR036746 TT1725-like superfamily SYN_01786 111a9f6dde30e90c8b0c0901bb941e72 112 Gene3D G3DSA:3.30.70.1120 1 99 5.9E-29 T 11-10-2018 IPR036746 TT1725-like superfamily SYN_01786 111a9f6dde30e90c8b0c0901bb941e72 112 Pfam PF04456 Protein of unknown function (DUF503) 3 89 4.0E-28 T 11-10-2018 IPR007546 Protein of unknown function DUF503 SYN_00025 9a70136c0eba6bcf5d7542450eeb0894 414 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 82 326 6.8E-23 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SYN_00025 9a70136c0eba6bcf5d7542450eeb0894 414 Gene3D G3DSA:2.40.420.20 339 396 5.3E-67 T 11-10-2018 SYN_00025 9a70136c0eba6bcf5d7542450eeb0894 414 Gene3D G3DSA:2.40.50.100 90 256 5.3E-67 T 11-10-2018 SYN_00025 9a70136c0eba6bcf5d7542450eeb0894 414 SUPERFAMILY SSF111369 81 328 1.05E-23 T 11-10-2018 SYN_00025 9a70136c0eba6bcf5d7542450eeb0894 414 Gene3D G3DSA:1.10.287.470 124 215 5.3E-67 T 11-10-2018 SYN_00025 9a70136c0eba6bcf5d7542450eeb0894 414 Gene3D G3DSA:2.40.30.170 80 338 5.3E-67 T 11-10-2018 SYN_00025 9a70136c0eba6bcf5d7542450eeb0894 414 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 80 411 1.6E-56 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 SYN_03123 5f830bd1c92ecc51240c0f727da944e7 142 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 10 138 9.2E-42 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 SYN_03123 5f830bd1c92ecc51240c0f727da944e7 142 Gene3D G3DSA:3.40.50.300 9 137 2.1E-34 T 11-10-2018 SYN_03123 5f830bd1c92ecc51240c0f727da944e7 142 SUPERFAMILY SSF52540 9 140 1.42E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01643 33edb795973f3f9f8c4b5de985658cb3 383 Pfam PF02754 Cysteine-rich domain 147 232 2.4E-18 T 11-10-2018 IPR004017 Cysteine-rich domain SYN_01643 33edb795973f3f9f8c4b5de985658cb3 383 Pfam PF02754 Cysteine-rich domain 270 357 6.9E-18 T 11-10-2018 IPR004017 Cysteine-rich domain SYN_01643 33edb795973f3f9f8c4b5de985658cb3 383 SUPERFAMILY SSF46548 6 101 2.62E-15 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SYN_01643 33edb795973f3f9f8c4b5de985658cb3 383 Gene3D G3DSA:1.10.1060.10 15 94 1.5E-9 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 SYN_01643 33edb795973f3f9f8c4b5de985658cb3 383 Pfam PF13183 4Fe-4S dicluster domain 22 81 4.1E-10 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_00388 0834fc612af593b94293fa666fb21d33 183 Pfam PF04367 Protein of unknown function (DUF502) 47 146 6.0E-26 T 11-10-2018 IPR007462 Protein of unknown function DUF502 SYN_02526 c21d98b4ef1cbb9afde58e38ed07e13e 373 Gene3D G3DSA:3.30.1370.60 79 343 2.9E-128 T 11-10-2018 SYN_02526 c21d98b4ef1cbb9afde58e38ed07e13e 373 Gene3D G3DSA:1.10.1530.10 21 364 2.9E-128 T 11-10-2018 SYN_02526 c21d98b4ef1cbb9afde58e38ed07e13e 373 Pfam PF02615 Malate/L-lactate dehydrogenase 16 360 2.6E-125 T 11-10-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0016491|GO:0055114 SYN_02526 c21d98b4ef1cbb9afde58e38ed07e13e 373 SUPERFAMILY SSF89733 14 369 1.57E-107 T 11-10-2018 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily GO:0016491|GO:0055114 SYN_00549 73c962e84a962c67303028220f39d553 163 Hamap MF_01398 ATP synthase subunit b [atpF]. 24 160 10.392 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SYN_00549 73c962e84a962c67303028220f39d553 163 Pfam PF00430 ATP synthase B/B' CF(0) 28 158 9.8E-18 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SYN_02254 6310cc8a87c6aadb4ccd01429b656927 334 Pfam PF10040 CRISPR-associated endoribonuclease Cas6 206 327 2.2E-15 T 11-10-2018 IPR019267 CRISPR-associated protein Cas6, C-terminal SYN_02254 6310cc8a87c6aadb4ccd01429b656927 334 Gene3D G3DSA:3.30.70.1900 195 331 3.3E-11 T 11-10-2018 SYN_02366 393cec7808c3b6bde7494847a6422f73 152 PIRSF PIRSF005384 3 149 7.5E-56 T 11-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 SYN_02366 393cec7808c3b6bde7494847a6422f73 152 Gene3D G3DSA:3.40.1400.10 1 150 1.2E-60 T 11-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 SYN_02366 393cec7808c3b6bde7494847a6422f73 152 Pfam PF02502 Ribose/Galactose Isomerase 5 142 1.6E-51 T 11-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 SYN_02366 393cec7808c3b6bde7494847a6422f73 152 SUPERFAMILY SSF89623 3 146 3.4E-53 T 11-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 SYN_02366 393cec7808c3b6bde7494847a6422f73 152 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 4 145 2.7E-54 T 11-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 SYN_02366 393cec7808c3b6bde7494847a6422f73 152 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 5 147 1.1E-54 T 11-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 SYN_02619 4d16f67b059525de49c182bde9aec2fa 375 Gene3D G3DSA:3.30.390.10 2 131 8.0E-19 T 11-10-2018 IPR029017 Enolase-like, N-terminal SYN_02619 4d16f67b059525de49c182bde9aec2fa 375 Gene3D G3DSA:3.20.20.120 132 357 2.1E-37 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily SYN_02619 4d16f67b059525de49c182bde9aec2fa 375 SUPERFAMILY SSF54826 5 115 2.59E-15 T 11-10-2018 SYN_02619 4d16f67b059525de49c182bde9aec2fa 375 SMART SM00922 150 241 1.8E-8 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal SYN_02619 4d16f67b059525de49c182bde9aec2fa 375 SUPERFAMILY SSF51604 156 361 1.19E-32 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily SYN_02619 4d16f67b059525de49c182bde9aec2fa 375 Pfam PF13378 Enolase C-terminal domain-like 156 356 6.2E-18 T 11-10-2018 IPR029065 Enolase C-terminal domain-like SYN_02950 c9de4310b54d69519bc44dbd80fba7e0 546 Pfam PF00342 Phosphoglucose isomerase 51 535 8.3E-219 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_02950 c9de4310b54d69519bc44dbd80fba7e0 546 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 490 507 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_02950 c9de4310b54d69519bc44dbd80fba7e0 546 Gene3D G3DSA:1.10.1390.10 500 544 8.9E-19 T 11-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_02950 c9de4310b54d69519bc44dbd80fba7e0 546 SUPERFAMILY SSF53697 7 543 5.28E-212 T 11-10-2018 SYN_02950 c9de4310b54d69519bc44dbd80fba7e0 546 Gene3D G3DSA:3.40.50.10490 97 292 1.3E-226 T 11-10-2018 SYN_02950 c9de4310b54d69519bc44dbd80fba7e0 546 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 266 279 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_02950 c9de4310b54d69519bc44dbd80fba7e0 546 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 45 517 40.371 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_02950 c9de4310b54d69519bc44dbd80fba7e0 546 PRINTS PR00662 Glucose-6-phosphate isomerase signature 458 476 5.1E-52 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_02950 c9de4310b54d69519bc44dbd80fba7e0 546 PRINTS PR00662 Glucose-6-phosphate isomerase signature 490 503 5.1E-52 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_02950 c9de4310b54d69519bc44dbd80fba7e0 546 PRINTS PR00662 Glucose-6-phosphate isomerase signature 149 168 5.1E-52 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_02950 c9de4310b54d69519bc44dbd80fba7e0 546 PRINTS PR00662 Glucose-6-phosphate isomerase signature 262 280 5.1E-52 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_02950 c9de4310b54d69519bc44dbd80fba7e0 546 PRINTS PR00662 Glucose-6-phosphate isomerase signature 339 360 5.1E-52 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_02950 c9de4310b54d69519bc44dbd80fba7e0 546 PRINTS PR00662 Glucose-6-phosphate isomerase signature 476 490 5.1E-52 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_02950 c9de4310b54d69519bc44dbd80fba7e0 546 Gene3D G3DSA:3.40.50.10490 13 499 1.3E-226 T 11-10-2018 SYN_00569 031c92b29c2f5bcd61d6d708e2370e61 494 SUPERFAMILY SSF52540 210 474 1.71E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00569 031c92b29c2f5bcd61d6d708e2370e61 494 SUPERFAMILY SSF160246 27 87 8.63E-10 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily SYN_00569 031c92b29c2f5bcd61d6d708e2370e61 494 SMART SM00382 229 414 2.4E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_02357 e8fbeb52e516a55a012819ca68cd7b26 137 Pfam PF13581 Histidine kinase-like ATPase domain 9 132 1.1E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_02357 e8fbeb52e516a55a012819ca68cd7b26 137 Gene3D G3DSA:3.30.565.10 2 137 7.9E-18 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_02357 e8fbeb52e516a55a012819ca68cd7b26 137 SUPERFAMILY SSF55874 34 126 7.98E-8 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_02875 4e7a5a21f4eac188504f6bb74e4405c5 204 SUPERFAMILY SSF51161 1 181 2.46E-33 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily SYN_02875 4e7a5a21f4eac188504f6bb74e4405c5 204 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 17 51 3.1E-5 T 11-10-2018 IPR001451 Hexapeptide repeat SYN_02875 4e7a5a21f4eac188504f6bb74e4405c5 204 Gene3D G3DSA:2.160.10.10 1 202 4.2E-57 T 11-10-2018 SYN_02368 2871142486a1b1a42a42460c5218a1f4 150 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 82 117 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 SYN_02368 2871142486a1b1a42a42460c5218a1f4 150 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 9 127 5.6E-27 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain SYN_02368 2871142486a1b1a42a42460c5218a1f4 150 Gene3D G3DSA:3.40.140.10 1 150 2.4E-45 T 11-10-2018 SYN_02368 2871142486a1b1a42a42460c5218a1f4 150 SUPERFAMILY SSF53927 11 148 4.52E-40 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 SYN_02368 2871142486a1b1a42a42460c5218a1f4 150 PIRSF PIRSF006019 1 150 3.0E-54 T 11-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 SYN_00901 a98b1f505c669234ac990170bccda170 174 Pfam PF01725 Ham1 family 9 161 2.1E-47 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 SYN_00901 a98b1f505c669234ac990170bccda170 174 SUPERFAMILY SSF52972 6 164 1.26E-55 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like SYN_00901 a98b1f505c669234ac990170bccda170 174 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 11 163 4.6E-49 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 SYN_00901 a98b1f505c669234ac990170bccda170 174 Gene3D G3DSA:3.90.950.10 1 168 1.8E-61 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like SYN_00901 a98b1f505c669234ac990170bccda170 174 Hamap MF_01405 dITP/XTP pyrophosphatase. 1 165 39.283 T 11-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 SYN_00250 3095b4f95fb0f1f1112f4e19e33e4b33 493 SUPERFAMILY SSF53448 251 459 1.41E-34 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_00250 3095b4f95fb0f1f1112f4e19e33e4b33 493 Pfam PF00535 Glycosyl transferase family 2 251 389 1.3E-16 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 SYN_00250 3095b4f95fb0f1f1112f4e19e33e4b33 493 Gene3D G3DSA:3.90.550.10 243 489 5.0E-32 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_02354 d22c976e1344f67bb48d5829fc1e3891 242 SUPERFAMILY SSF48317 28 234 5.49E-37 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily SYN_02354 d22c976e1344f67bb48d5829fc1e3891 242 Gene3D G3DSA:1.20.144.10 22 146 6.4E-6 T 11-10-2018 SYN_02354 d22c976e1344f67bb48d5829fc1e3891 242 Gene3D G3DSA:1.20.144.10 147 240 4.9E-21 T 11-10-2018 SYN_02354 d22c976e1344f67bb48d5829fc1e3891 242 Pfam PF01569 PAP2 superfamily 116 230 5.0E-22 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SYN_02354 d22c976e1344f67bb48d5829fc1e3891 242 SMART SM00014 114 228 1.9E-18 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SYN_01744 c6039a61f0dc2419bd400c326b35515c 453 Pfam PF02875 Mur ligase family, glutamate ligase domain 316 385 9.1E-7 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 SYN_01744 c6039a61f0dc2419bd400c326b35515c 453 SUPERFAMILY SSF53623 103 312 4.71E-51 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 SYN_01744 c6039a61f0dc2419bd400c326b35515c 453 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 9 452 34.06 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SYN_01744 c6039a61f0dc2419bd400c326b35515c 453 SUPERFAMILY SSF51984 4 101 1.7E-14 T 11-10-2018 SYN_01744 c6039a61f0dc2419bd400c326b35515c 453 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 450 7.3E-131 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 SYN_01744 c6039a61f0dc2419bd400c326b35515c 453 Gene3D G3DSA:3.40.50.720 4 100 6.5E-20 T 11-10-2018 SYN_01744 c6039a61f0dc2419bd400c326b35515c 453 Pfam PF08245 Mur ligase middle domain 117 294 5.4E-33 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 SYN_01744 c6039a61f0dc2419bd400c326b35515c 453 Gene3D G3DSA:3.90.190.20 320 453 5.3E-41 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 SYN_01744 c6039a61f0dc2419bd400c326b35515c 453 SUPERFAMILY SSF53244 314 452 8.24E-39 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 SYN_01744 c6039a61f0dc2419bd400c326b35515c 453 Gene3D G3DSA:3.40.1190.10 101 314 2.0E-59 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 SYN_01303 e2816556491e888c9e4da2cd1ecb7926 136 Pfam PF12732 YtxH-like protein 19 107 1.6E-17 T 11-10-2018 IPR024623 Uncharacterised protein family YtxH SYN_01147 a088ba85b0e0df7c1b4c9fa0c2adaeaf 357 Gene3D G3DSA:3.40.800.10 33 356 2.2E-66 T 11-10-2018 SYN_01147 a088ba85b0e0df7c1b4c9fa0c2adaeaf 357 PIRSF PIRSF036979 45 347 3.7E-47 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 SYN_01147 a088ba85b0e0df7c1b4c9fa0c2adaeaf 357 SUPERFAMILY SSF52768 34 348 2.7E-66 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily SYN_01147 a088ba85b0e0df7c1b4c9fa0c2adaeaf 357 Pfam PF00491 Arginase family 66 340 1.5E-62 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 SYN_00196 c9d377835b9782010cce0d10e6b1264f 244 Pfam PF00188 Cysteine-rich secretory protein family 95 243 6.3E-16 T 11-10-2018 IPR014044 CAP domain SYN_00196 c9d377835b9782010cce0d10e6b1264f 244 Gene3D G3DSA:3.40.33.10 62 244 8.9E-41 T 11-10-2018 IPR035940 CAP superfamily SYN_00196 c9d377835b9782010cce0d10e6b1264f 244 SUPERFAMILY SSF55797 87 244 1.57E-19 T 11-10-2018 IPR035940 CAP superfamily SYN_03272 256cadb778b742181673b42df622492c 203 Gene3D G3DSA:3.30.60.80 55 77 2.5E-5 T 11-10-2018 SYN_03272 256cadb778b742181673b42df622492c 203 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 96.02 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 SYN_03272 256cadb778b742181673b42df622492c 203 SUPERFAMILY SSF111304 5 200 7.06E-70 T 11-10-2018 IPR023627 Recombination protein RecR SYN_03272 256cadb778b742181673b42df622492c 203 Pfam PF02132 RecR protein 40 79 5.9E-15 T 11-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger SYN_03272 256cadb778b742181673b42df622492c 203 TIGRFAM TIGR00615 recR: recombination protein RecR 4 197 3.1E-73 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 SYN_03272 256cadb778b742181673b42df622492c 203 Gene3D G3DSA:1.10.8.420 1 54 2.1E-19 T 11-10-2018 SYN_03272 256cadb778b742181673b42df622492c 203 ProSitePatterns PS01300 RecR protein signature. 58 79 - T 11-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 SYN_03272 256cadb778b742181673b42df622492c 203 Gene3D G3DSA:3.40.1360.10 78 199 2.9E-43 T 11-10-2018 SYN_03272 256cadb778b742181673b42df622492c 203 SMART SM00493 81 166 3.6E-12 T 11-10-2018 IPR006171 TOPRIM domain SYN_03272 256cadb778b742181673b42df622492c 203 Pfam PF13662 Toprim domain 81 172 4.7E-20 T 11-10-2018 IPR006171 TOPRIM domain SYN_02240 38a7ab2531627f9d7ec9547013816848 91 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 1 79 13.732 T 11-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 SYN_02240 38a7ab2531627f9d7ec9547013816848 91 Pfam PF09827 CRISPR associated protein Cas2 1 73 7.0E-20 T 11-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 SYN_02240 38a7ab2531627f9d7ec9547013816848 91 Gene3D G3DSA:3.30.70.240 1 91 7.5E-22 T 11-10-2018 SYN_02240 38a7ab2531627f9d7ec9547013816848 91 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 1 78 2.7E-14 T 11-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 SYN_02240 38a7ab2531627f9d7ec9547013816848 91 SUPERFAMILY SSF143430 1 78 2.75E-21 T 11-10-2018 SYN_00531 b1ca276d46c0507f017ccc9b0a3f2ed1 310 SUPERFAMILY SSF51735 1 308 2.0E-85 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_00531 b1ca276d46c0507f017ccc9b0a3f2ed1 310 Gene3D G3DSA:3.90.25.10 182 305 9.8E-105 T 11-10-2018 SYN_00531 b1ca276d46c0507f017ccc9b0a3f2ed1 310 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 301 3.1E-50 T 11-10-2018 IPR016040 NAD(P)-binding domain SYN_00531 b1ca276d46c0507f017ccc9b0a3f2ed1 310 Gene3D G3DSA:3.40.50.720 2 292 9.8E-105 T 11-10-2018 SYN_01644 011f12ab57c82032793250ad221e40ea 68 Pfam PF12831 FAD dependent oxidoreductase 17 55 2.4E-9 T 11-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal SYN_01644 011f12ab57c82032793250ad221e40ea 68 Gene3D G3DSA:3.50.50.60 3 67 1.6E-11 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_01644 011f12ab57c82032793250ad221e40ea 68 SUPERFAMILY SSF51971 17 65 4.71E-12 T 11-10-2018 SYN_00275 a7aa9638ac51be8ce0a583ef5ec1e9f4 330 Pfam PF04055 Radical SAM superfamily 13 168 3.7E-16 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_00275 a7aa9638ac51be8ce0a583ef5ec1e9f4 330 SUPERFAMILY SSF102114 11 309 5.49E-38 T 11-10-2018 SYN_00275 a7aa9638ac51be8ce0a583ef5ec1e9f4 330 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 15 26 - T 11-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_00275 a7aa9638ac51be8ce0a583ef5ec1e9f4 330 Gene3D G3DSA:3.20.20.70 8 279 3.9E-28 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_00858 73b773887f3307dd7db27c5f25547378 299 Pfam PF01522 Polysaccharide deacetylase 123 259 7.9E-24 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 SYN_00858 73b773887f3307dd7db27c5f25547378 299 Gene3D G3DSA:3.20.20.370 70 297 6.7E-57 T 11-10-2018 SYN_00858 73b773887f3307dd7db27c5f25547378 299 SUPERFAMILY SSF88713 92 275 5.44E-32 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SYN_02287 d977ba94a191f721820b6651a71f96d8 183 Pfam PF06890 Bacteriophage Mu Gp45 protein 5 139 1.5E-28 T 11-10-2018 IPR014462 Phage-associated protein Gp45 SYN_02287 d977ba94a191f721820b6651a71f96d8 183 Gene3D G3DSA:2.20.25.540 66 118 1.4E-5 T 11-10-2018 SYN_02101 11995bfbc4f94ad7c3e545028fca82fa 251 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 24 223 1.2E-34 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02101 11995bfbc4f94ad7c3e545028fca82fa 251 SUPERFAMILY SSF81336 82 220 6.8E-33 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02101 11995bfbc4f94ad7c3e545028fca82fa 251 PRINTS PR00123 ATP synthase A subunit signature 163 185 4.2E-15 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02101 11995bfbc4f94ad7c3e545028fca82fa 251 PRINTS PR00123 ATP synthase A subunit signature 207 222 4.2E-15 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02101 11995bfbc4f94ad7c3e545028fca82fa 251 PRINTS PR00123 ATP synthase A subunit signature 87 103 4.2E-15 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02101 11995bfbc4f94ad7c3e545028fca82fa 251 ProSitePatterns PS00449 ATP synthase a subunit signature. 166 175 - T 11-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02101 11995bfbc4f94ad7c3e545028fca82fa 251 Hamap MF_01393 ATP synthase subunit a [atpB]. 15 227 14.038 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02101 11995bfbc4f94ad7c3e545028fca82fa 251 Gene3D G3DSA:1.20.120.220 79 227 9.2E-33 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_02101 11995bfbc4f94ad7c3e545028fca82fa 251 TIGRFAM TIGR03306 altF1_A: alternate F1F0 ATPase, F0 subunit A 9 225 1.7E-100 T 11-10-2018 IPR017692 Alternate ATP synthase, F0complex, subunit A SYN_02101 11995bfbc4f94ad7c3e545028fca82fa 251 Pfam PF00119 ATP synthase A chain 29 220 6.8E-45 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 SYN_01929 29eae64273f8caa28808fbf638d052f6 413 SMART SM00490 259 340 3.8E-30 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_01929 29eae64273f8caa28808fbf638d052f6 413 SMART SM00487 20 223 2.3E-54 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain SYN_01929 29eae64273f8caa28808fbf638d052f6 413 Pfam PF00271 Helicase conserved C-terminal domain 236 339 1.9E-30 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_01929 29eae64273f8caa28808fbf638d052f6 413 Gene3D G3DSA:3.40.50.300 215 378 8.6E-52 T 11-10-2018 SYN_01929 29eae64273f8caa28808fbf638d052f6 413 SUPERFAMILY SSF52540 74 359 1.56E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01929 29eae64273f8caa28808fbf638d052f6 413 Pfam PF00270 DEAD/DEAH box helicase 25 196 3.6E-47 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SYN_01929 29eae64273f8caa28808fbf638d052f6 413 Gene3D G3DSA:3.40.50.300 1 210 5.9E-69 T 11-10-2018 SYN_02692 5d2a3ffdd2f6322e767600f3ab7facca 112 SUPERFAMILY SSF47598 26 103 1.07E-19 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 SYN_02692 5d2a3ffdd2f6322e767600f3ab7facca 112 Pfam PF08681 Protein of unknown function (DUF1778) 28 106 5.0E-20 T 11-10-2018 IPR014795 Vibrio phage ICP1, Orf50 SYN_02692 5d2a3ffdd2f6322e767600f3ab7facca 112 Gene3D G3DSA:1.20.5.780 22 108 1.6E-26 T 11-10-2018 SYN_00762 44f1029af0d59a7557008161570a3d3d 263 Gene3D G3DSA:3.40.50.10610 106 229 2.9E-7 T 11-10-2018 SYN_03257 63c02e8a7e56d88b8a73f01b5af89778 140 SMART SM01374 19 140 1.9E-88 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SYN_03257 63c02e8a7e56d88b8a73f01b5af89778 140 Gene3D G3DSA:2.40.150.20 19 140 2.0E-56 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 SYN_03257 63c02e8a7e56d88b8a73f01b5af89778 140 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 19 140 2.4E-59 T 11-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 SYN_03257 63c02e8a7e56d88b8a73f01b5af89778 140 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 19 140 28.29 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SYN_03257 63c02e8a7e56d88b8a73f01b5af89778 140 SUPERFAMILY SSF50193 19 140 2.75E-53 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 SYN_03257 63c02e8a7e56d88b8a73f01b5af89778 140 Pfam PF00238 Ribosomal protein L14p/L23e 19 140 1.7E-56 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SYN_03257 63c02e8a7e56d88b8a73f01b5af89778 140 ProSitePatterns PS00049 Ribosomal protein L14 signature. 78 104 - T 11-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00217 36f05cd3f36c5dfe4bb1e01d2ce1d300 361 Pfam PF01032 FecCD transport family 30 357 1.5E-83 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 SYN_00217 36f05cd3f36c5dfe4bb1e01d2ce1d300 361 SUPERFAMILY SSF81345 14 357 4.58E-75 T 11-10-2018 IPR037294 ABC transporter, BtuC-like SYN_00217 36f05cd3f36c5dfe4bb1e01d2ce1d300 361 Gene3D G3DSA:1.10.3470.10 17 361 2.4E-93 T 11-10-2018 IPR037294 ABC transporter, BtuC-like SYN_02869 4cad2a43204d3e719657d1573accb413 558 Gene3D G3DSA:3.30.420.40 1 74 1.1E-5 T 11-10-2018 SYN_02869 4cad2a43204d3e719657d1573accb413 558 Pfam PF01968 Hydantoinase/oxoprolinase 178 460 2.1E-42 T 11-10-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 SYN_02869 4cad2a43204d3e719657d1573accb413 558 SUPERFAMILY SSF53067 1 455 2.93E-17 T 11-10-2018 SYN_02869 4cad2a43204d3e719657d1573accb413 558 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 3 157 1.4E-22 T 11-10-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 SYN_03159 2d42e451365b6ae9209851f6723960df 406 Pfam PF02371 Transposase IS116/IS110/IS902 family 280 365 4.8E-25 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 SYN_03159 2d42e451365b6ae9209851f6723960df 406 Pfam PF01548 Transposase 18 173 4.7E-41 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 SYN_00288 9892da870bff83c544411418fdb6ac8d 276 SUPERFAMILY SSF144020 16 275 1.57E-65 T 11-10-2018 IPR024064 FdhE-like superfamily SYN_00288 9892da870bff83c544411418fdb6ac8d 276 Gene3D G3DSA:3.90.1670.10 9 276 1.8E-46 T 11-10-2018 IPR024064 FdhE-like superfamily SYN_00288 9892da870bff83c544411418fdb6ac8d 276 Pfam PF04216 Protein involved in formate dehydrogenase formation 16 276 3.8E-34 T 11-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 SYN_00674 1623ffff4121c715ceb376dc1108eac9 496 Gene3D G3DSA:3.40.50.300 203 378 1.5E-19 T 11-10-2018 SYN_00674 1623ffff4121c715ceb376dc1108eac9 496 Gene3D G3DSA:3.40.50.300 2 90 2.1E-7 T 11-10-2018 SYN_00674 1623ffff4121c715ceb376dc1108eac9 496 Pfam PF05872 Bacterial protein of unknown function (DUF853) 6 495 6.0E-218 T 11-10-2018 IPR033186 Helicase HerA-like C-terminal SYN_00674 1623ffff4121c715ceb376dc1108eac9 496 SUPERFAMILY SSF52540 9 381 2.44E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02973 bdbc543d1f4d33334426e735c9a0ae86 181 SUPERFAMILY SSF53098 24 177 8.34E-44 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily SYN_02973 bdbc543d1f4d33334426e735c9a0ae86 181 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 25 172 3.9E-45 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SYN_02973 bdbc543d1f4d33334426e735c9a0ae86 181 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 23 175 40.199 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SYN_02973 bdbc543d1f4d33334426e735c9a0ae86 181 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 135 169 - T 11-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 SYN_02973 bdbc543d1f4d33334426e735c9a0ae86 181 Gene3D G3DSA:3.30.420.10 25 180 3.0E-44 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 SYN_02973 bdbc543d1f4d33334426e735c9a0ae86 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 26 39 6.3E-35 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SYN_02973 bdbc543d1f4d33334426e735c9a0ae86 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 105 121 6.3E-35 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SYN_02973 bdbc543d1f4d33334426e735c9a0ae86 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 160 172 6.3E-35 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SYN_02973 bdbc543d1f4d33334426e735c9a0ae86 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 129 148 6.3E-35 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SYN_02973 bdbc543d1f4d33334426e735c9a0ae86 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 6.3E-35 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SYN_02973 bdbc543d1f4d33334426e735c9a0ae86 181 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 25 177 4.3E-47 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 SYN_02053 e38dadb55397f3b83670d7d2f2039e1b 256 SUPERFAMILY SSF52540 1 252 7.8E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02053 e38dadb55397f3b83670d7d2f2039e1b 256 Gene3D G3DSA:3.40.50.300 1 255 5.7E-74 T 11-10-2018 SYN_02053 e38dadb55397f3b83670d7d2f2039e1b 256 Pfam PF13614 AAA domain 3 178 2.5E-60 T 11-10-2018 IPR025669 AAA domain SYN_00201 88a1877bb73faf4512490763459e3d3a 414 SUPERFAMILY SSF56300 1 338 5.55E-54 T 11-10-2018 SYN_00201 88a1877bb73faf4512490763459e3d3a 414 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 284 380 2.0E-18 T 11-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain SYN_00201 88a1877bb73faf4512490763459e3d3a 414 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 263 7.9E-61 T 11-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 SYN_00201 88a1877bb73faf4512490763459e3d3a 414 Gene3D G3DSA:3.60.21.10 1 284 6.6E-85 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like SYN_00201 88a1877bb73faf4512490763459e3d3a 414 Pfam PF00149 Calcineurin-like phosphoesterase 1 236 6.3E-15 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 SYN_00369 31d38afabddf53a1fa596cd3c1f7278d 426 Gene3D G3DSA:1.20.1270.370 65 258 1.5E-28 T 11-10-2018 SYN_00369 31d38afabddf53a1fa596cd3c1f7278d 426 Gene3D G3DSA:3.40.50.11900 278 426 5.2E-37 T 11-10-2018 SYN_00369 31d38afabddf53a1fa596cd3c1f7278d 426 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 77 422 6.8E-70 T 11-10-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit SYN_00369 31d38afabddf53a1fa596cd3c1f7278d 426 Gene3D G3DSA:3.40.50.11890 70 196 1.5E-28 T 11-10-2018 SYN_00740 a4cd1f47ecd5ee4bd0038232da48da69 350 PRINTS PR01270 Histone deacetylase superfamily signature 122 145 5.0E-17 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 SYN_00740 a4cd1f47ecd5ee4bd0038232da48da69 350 PRINTS PR01270 Histone deacetylase superfamily signature 240 250 5.0E-17 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 SYN_00740 a4cd1f47ecd5ee4bd0038232da48da69 350 PRINTS PR01270 Histone deacetylase superfamily signature 156 171 5.0E-17 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 SYN_00740 a4cd1f47ecd5ee4bd0038232da48da69 350 Gene3D G3DSA:3.40.800.20 1 346 5.5E-123 T 11-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 SYN_00740 a4cd1f47ecd5ee4bd0038232da48da69 350 Pfam PF00850 Histone deacetylase domain 21 309 4.3E-89 T 11-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 SYN_00740 a4cd1f47ecd5ee4bd0038232da48da69 350 SUPERFAMILY SSF52768 2 323 1.53E-111 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily SYN_00524 2a7db76c8c76fdb67b93f90824630005 1242 Pfam PF07669 Eco57I restriction-modification methylase 665 782 3.3E-11 T 11-10-2018 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 SYN_00524 2a7db76c8c76fdb67b93f90824630005 1242 SUPERFAMILY SSF53335 283 786 6.25E-54 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_00524 2a7db76c8c76fdb67b93f90824630005 1242 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 668 674 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SYN_00524 2a7db76c8c76fdb67b93f90824630005 1242 Pfam PF12950 TaqI-like C-terminal specificity domain 937 1054 8.6E-7 T 11-10-2018 IPR025931 TaqI-like C-terminal specificity domain SYN_00524 2a7db76c8c76fdb67b93f90824630005 1242 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 454 470 6.8E-12 T 11-10-2018 SYN_00524 2a7db76c8c76fdb67b93f90824630005 1242 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 712 736 6.8E-12 T 11-10-2018 SYN_00524 2a7db76c8c76fdb67b93f90824630005 1242 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 665 677 6.8E-12 T 11-10-2018 SYN_00268 2076e4be45b5eec1b71ca03f7ecd4915 141 Gene3D G3DSA:2.40.50.100 71 141 6.1E-25 T 11-10-2018 SYN_00268 2076e4be45b5eec1b71ca03f7ecd4915 141 Gene3D G3DSA:2.40.50.100 1 67 3.9E-25 T 11-10-2018 SYN_00268 2076e4be45b5eec1b71ca03f7ecd4915 141 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 74 140 1.6E-24 T 11-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 SYN_00268 2076e4be45b5eec1b71ca03f7ecd4915 141 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 1 68 1.5E-20 T 11-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 SYN_00268 2076e4be45b5eec1b71ca03f7ecd4915 141 SUPERFAMILY SSF50331 1 69 1.85E-20 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal SYN_00268 2076e4be45b5eec1b71ca03f7ecd4915 141 SUPERFAMILY SSF50331 74 140 8.99E-21 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal SYN_00268 2076e4be45b5eec1b71ca03f7ecd4915 141 Pfam PF03459 TOBE domain 4 66 5.9E-14 T 11-10-2018 IPR005116 Transport-associated OB, type 1 SYN_00268 2076e4be45b5eec1b71ca03f7ecd4915 141 Pfam PF03459 TOBE domain 76 138 1.1E-18 T 11-10-2018 IPR005116 Transport-associated OB, type 1 SYN_00768 9bd289f3d0537cdcccd82083f9f40400 250 SUPERFAMILY SSF75217 2 241 7.85E-99 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases SYN_00768 9bd289f3d0537cdcccd82083f9f40400 250 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 3 234 1.1E-92 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SYN_00768 9bd289f3d0537cdcccd82083f9f40400 250 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 250 107.421 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SYN_00768 9bd289f3d0537cdcccd82083f9f40400 250 PIRSF PIRSF000386 2 249 6.1E-103 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SYN_00768 9bd289f3d0537cdcccd82083f9f40400 250 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 24 221 6.6E-67 T 11-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SYN_00768 9bd289f3d0537cdcccd82083f9f40400 250 Gene3D G3DSA:3.40.1280.10 1 165 6.4E-68 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SYN_00768 9bd289f3d0537cdcccd82083f9f40400 250 Gene3D G3DSA:1.10.1270.20 166 249 1.8E-34 T 11-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SYN_02834 169987a095ca3d07e78acb0735207013 89 Pfam PF01313 Bacterial export proteins, family 3 6 78 3.1E-27 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SYN_02834 169987a095ca3d07e78acb0735207013 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 4.0E-22 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SYN_02834 169987a095ca3d07e78acb0735207013 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 4.0E-22 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SYN_02834 169987a095ca3d07e78acb0735207013 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 4.0E-22 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SYN_02834 169987a095ca3d07e78acb0735207013 89 PIRSF PIRSF004669 1 89 9.6E-32 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 SYN_02834 169987a095ca3d07e78acb0735207013 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 3.6E-31 T 11-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 SYN_02038 7af4e70d730b575ccbb3d0fef4f57abd 383 Gene3D G3DSA:1.10.10.1320 3 85 3.6E-7 T 11-10-2018 SYN_02038 7af4e70d730b575ccbb3d0fef4f57abd 383 Pfam PF13490 Putative zinc-finger 3 36 8.8E-10 T 11-10-2018 IPR027383 Putative zinc-finger SYN_02086 8138fb938b1805d199ddb7a5fc7b604e 549 Gene3D G3DSA:2.170.8.10 283 342 5.5E-35 T 11-10-2018 SYN_02086 8138fb938b1805d199ddb7a5fc7b604e 549 SUPERFAMILY SSF53795 226 537 2.52E-58 T 11-10-2018 SYN_02086 8138fb938b1805d199ddb7a5fc7b604e 549 Pfam PF01293 Phosphoenolpyruvate carboxykinase 68 463 8.5E-41 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 SYN_02086 8138fb938b1805d199ddb7a5fc7b604e 549 Gene3D G3DSA:3.40.449.10 64 204 5.5E-35 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 SYN_02086 8138fb938b1805d199ddb7a5fc7b604e 549 Gene3D G3DSA:3.90.228.20 205 505 5.5E-35 T 11-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 SYN_03588 8fe08daca55cbb1c4025a91aa5f55b2f 136 Pfam PF00583 Acetyltransferase (GNAT) family 29 107 1.3E-10 T 11-10-2018 IPR000182 GNAT domain SYN_03588 8fe08daca55cbb1c4025a91aa5f55b2f 136 Gene3D G3DSA:3.40.630.30 17 136 3.5E-15 T 11-10-2018 SYN_03588 8fe08daca55cbb1c4025a91aa5f55b2f 136 SUPERFAMILY SSF55729 32 132 1.42E-16 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase SYN_01655 b1226d248e539a82753627e90529b7ec 370 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 44 146 1.6E-22 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SYN_01655 b1226d248e539a82753627e90529b7ec 370 SUPERFAMILY SSF50129 29 190 2.28E-33 T 11-10-2018 IPR011032 GroES-like superfamily SYN_01655 b1226d248e539a82753627e90529b7ec 370 SUPERFAMILY SSF51735 159 337 4.6E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_01655 b1226d248e539a82753627e90529b7ec 370 Gene3D G3DSA:3.90.180.10 30 356 4.7E-66 T 11-10-2018 SYN_01655 b1226d248e539a82753627e90529b7ec 370 Gene3D G3DSA:3.40.50.720 166 314 4.7E-66 T 11-10-2018 SYN_01655 b1226d248e539a82753627e90529b7ec 370 TIGRFAM TIGR03201 dearomat_had: 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase 28 368 3.8E-124 T 11-10-2018 IPR017614 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase KEGG: 00362+1.1.1.368|MetaCyc: PWY-7401 SYN_01655 b1226d248e539a82753627e90529b7ec 370 Pfam PF00107 Zinc-binding dehydrogenase 194 328 1.5E-16 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SYN_01335 8eb58a2a406870c4b12be22946956adc 284 Pfam PF01965 DJ-1/PfpI family 79 209 3.9E-8 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 SYN_01335 8eb58a2a406870c4b12be22946956adc 284 Gene3D G3DSA:3.40.50.880 63 283 1.7E-86 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like SYN_01335 8eb58a2a406870c4b12be22946956adc 284 SUPERFAMILY SSF52317 69 282 6.7E-58 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like SYN_00243 0057ee2b724af872ae1184d4a949d492 369 Pfam PF12698 ABC-2 family transporter protein 24 360 6.6E-45 T 11-10-2018 SYN_00024 275961f24a7d41001621c90a8af2d537 239 SMART SM00382 41 229 3.0E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00024 275961f24a7d41001621c90a8af2d537 239 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_00024 275961f24a7d41001621c90a8af2d537 239 SUPERFAMILY SSF52540 12 232 3.04E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00024 275961f24a7d41001621c90a8af2d537 239 Pfam PF00005 ABC transporter 32 180 1.6E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_00024 275961f24a7d41001621c90a8af2d537 239 Gene3D G3DSA:3.40.50.300 10 238 1.7E-70 T 11-10-2018 SYN_02223 98d907ed8e94560e8e66fb99e9e08d1b 161 Pfam PF01750 Hydrogenase maturation protease 47 148 1.0E-13 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SYN_02223 98d907ed8e94560e8e66fb99e9e08d1b 161 PRINTS PR00446 Hydrogen uptake protein signature 31 42 1.9E-8 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SYN_02223 98d907ed8e94560e8e66fb99e9e08d1b 161 PRINTS PR00446 Hydrogen uptake protein signature 19 31 1.9E-8 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SYN_02223 98d907ed8e94560e8e66fb99e9e08d1b 161 PRINTS PR00446 Hydrogen uptake protein signature 81 97 1.9E-8 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SYN_02223 98d907ed8e94560e8e66fb99e9e08d1b 161 PRINTS PR00446 Hydrogen uptake protein signature 70 80 1.9E-8 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SYN_02223 98d907ed8e94560e8e66fb99e9e08d1b 161 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 21 155 2.0E-30 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 SYN_02223 98d907ed8e94560e8e66fb99e9e08d1b 161 Gene3D G3DSA:3.40.50.1450 16 160 3.4E-37 T 11-10-2018 IPR023430 Peptidase HybD-like domain superfamily SYN_02223 98d907ed8e94560e8e66fb99e9e08d1b 161 SUPERFAMILY SSF53163 18 160 3.66E-26 T 11-10-2018 IPR023430 Peptidase HybD-like domain superfamily SYN_02167 5c1644d006bb0ae146a79a41d4b2cb19 498 Gene3D G3DSA:3.10.450.50 383 496 7.9E-8 T 11-10-2018 SYN_02167 5c1644d006bb0ae146a79a41d4b2cb19 498 Pfam PF03734 L,D-transpeptidase catalytic domain 66 196 8.1E-18 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 SYN_02167 5c1644d006bb0ae146a79a41d4b2cb19 498 SUPERFAMILY SSF54427 386 493 6.69E-14 T 11-10-2018 IPR032710 NTF2-like domain superfamily SYN_02167 5c1644d006bb0ae146a79a41d4b2cb19 498 SUPERFAMILY SSF141523 61 197 3.27E-14 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like SYN_02167 5c1644d006bb0ae146a79a41d4b2cb19 498 Gene3D G3DSA:2.40.440.10 44 263 1.4E-15 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like SYN_00300 554529e76599b25db8d010169a905cfc 297 Gene3D G3DSA:3.40.50.2000 5 201 4.5E-10 T 11-10-2018 SYN_01915 802b3af314797913fc3286208ff3e2e4 327 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 35 278 4.8E-46 T 11-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system SYN_02198 76940aec116babd60d90c70757de4f3e 217 Pfam PF01810 LysE type translocator 22 209 1.7E-30 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 SYN_00381 043c9340fa788d5e22afa3cfa971db85 345 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 20 345 39.901 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_00381 043c9340fa788d5e22afa3cfa971db85 345 Pfam PF13353 4Fe-4S single cluster domain 36 138 1.1E-8 T 11-10-2018 SYN_00381 043c9340fa788d5e22afa3cfa971db85 345 SMART SM00729 29 234 4.5E-16 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SYN_00381 043c9340fa788d5e22afa3cfa971db85 345 Pfam PF06463 Molybdenum Cofactor Synthesis C 202 327 1.1E-37 T 11-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_00381 043c9340fa788d5e22afa3cfa971db85 345 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 35 46 - T 11-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_00381 043c9340fa788d5e22afa3cfa971db85 345 Gene3D G3DSA:3.20.20.70 17 345 6.9E-101 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_00381 043c9340fa788d5e22afa3cfa971db85 345 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 20 345 6.6E-116 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 SYN_00381 043c9340fa788d5e22afa3cfa971db85 345 SUPERFAMILY SSF102114 22 300 2.49E-80 T 11-10-2018 SYN_00381 043c9340fa788d5e22afa3cfa971db85 345 Pfam PF04055 Radical SAM superfamily 33 195 2.6E-30 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_01756 5aa798d2aa0330adf2439d64ffaae82f 401 Pfam PF14341 PilX N-terminal 19 67 2.3E-10 T 11-10-2018 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain SYN_01756 5aa798d2aa0330adf2439d64ffaae82f 401 Pfam PF14341 PilX N-terminal 245 299 5.5E-13 T 11-10-2018 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain SYN_01278 0dd7c3398b5456ba94e69f521692ca37 294 Pfam PF08340 Domain of unknown function (DUF1732) 210 294 1.2E-34 T 11-10-2018 IPR013551 Domain of unknown function DUF1732 SYN_01278 0dd7c3398b5456ba94e69f521692ca37 294 Pfam PF03755 YicC-like family, N-terminal region 2 157 5.7E-38 T 11-10-2018 IPR013527 YicC-like, N-terminal SYN_01278 0dd7c3398b5456ba94e69f521692ca37 294 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 294 9.9E-73 T 11-10-2018 IPR005229 Conserved hypothetical protein CHP00255 SYN_02783 f3156598d18cc64756008cc5b1b65431 217 Pfam PF01464 Transglycosylase SLT domain 92 190 7.1E-30 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 SYN_02783 f3156598d18cc64756008cc5b1b65431 217 Pfam PF13511 Domain of unknown function (DUF4124) 35 63 3.2E-5 T 11-10-2018 IPR025392 Domain of unknown function DUF4124 SYN_02783 f3156598d18cc64756008cc5b1b65431 217 Gene3D G3DSA:1.10.530.10 45 216 2.3E-52 T 11-10-2018 SYN_02783 f3156598d18cc64756008cc5b1b65431 217 SUPERFAMILY SSF53955 65 215 7.19E-49 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily SYN_00943 cb5f1a2dda85fb25248d82bcb2fbefc9 153 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 148 1.8E-35 T 11-10-2018 IPR002178 PTS EIIA type-2 domain SYN_00943 cb5f1a2dda85fb25248d82bcb2fbefc9 153 Gene3D G3DSA:3.40.930.10 1 150 1.6E-48 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 SYN_00943 cb5f1a2dda85fb25248d82bcb2fbefc9 153 SUPERFAMILY SSF55804 1 147 9.16E-40 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 SYN_00943 cb5f1a2dda85fb25248d82bcb2fbefc9 153 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 11-10-2018 IPR002178 PTS EIIA type-2 domain SYN_02422 34c351e641bf4e6db88ef4917386b80e 71 Pfam PF12831 FAD dependent oxidoreductase 20 58 2.7E-9 T 11-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal SYN_02422 34c351e641bf4e6db88ef4917386b80e 71 Gene3D G3DSA:3.50.50.60 2 69 6.3E-12 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily SYN_02422 34c351e641bf4e6db88ef4917386b80e 71 SUPERFAMILY SSF51971 20 68 5.41E-12 T 11-10-2018 SYN_02623 e259542529b271ee350e57669347803a 433 Pfam PF01551 Peptidase family M23 283 379 8.3E-34 T 11-10-2018 IPR016047 Peptidase M23 SYN_02623 e259542529b271ee350e57669347803a 433 SUPERFAMILY SSF51261 132 381 4.39E-68 T 11-10-2018 IPR011055 Duplicated hybrid motif SYN_02623 e259542529b271ee350e57669347803a 433 Gene3D G3DSA:3.10.450.350 158 399 2.1E-89 T 11-10-2018 SYN_02623 e259542529b271ee350e57669347803a 433 Gene3D G3DSA:3.10.450.350 49 136 3.2E-8 T 11-10-2018 SYN_02623 e259542529b271ee350e57669347803a 433 Gene3D G3DSA:2.70.70.10 254 385 2.1E-89 T 11-10-2018 IPR011055 Duplicated hybrid motif SYN_01917 8485617126ab7048c60acdf2bfad4227 208 SMART SM00909 96 185 2.5E-27 T 11-10-2018 IPR019606 GerMN domain SYN_01917 8485617126ab7048c60acdf2bfad4227 208 Pfam PF10646 Sporulation and spore germination 69 181 1.4E-20 T 11-10-2018 IPR019606 GerMN domain SYN_01109 27327d0ebc2d2fedbcd7f6c7bae6ded1 485 Pfam PF13440 Polysaccharide biosynthesis protein 33 319 1.4E-68 T 11-10-2018 SYN_01109 27327d0ebc2d2fedbcd7f6c7bae6ded1 485 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 329 466 2.9E-9 T 11-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain SYN_03114 f4dfe870e6d5697adc5dd0f636364180 245 SUPERFAMILY SSF52833 91 233 4.48E-18 T 11-10-2018 IPR036249 Thioredoxin-like superfamily SYN_03114 f4dfe870e6d5697adc5dd0f636364180 245 Gene3D G3DSA:3.40.30.10 110 245 6.5E-25 T 11-10-2018 SYN_03114 f4dfe870e6d5697adc5dd0f636364180 245 SUPERFAMILY SSF54423 44 92 9.42E-8 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 SYN_03114 f4dfe870e6d5697adc5dd0f636364180 245 Pfam PF13098 Thioredoxin-like domain 121 229 3.4E-10 T 11-10-2018 IPR012336 Thioredoxin-like fold SYN_03114 f4dfe870e6d5697adc5dd0f636364180 245 Gene3D G3DSA:3.10.450.70 31 101 4.5E-6 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 SYN_03114 f4dfe870e6d5697adc5dd0f636364180 245 Pfam PF10411 Disulfide bond isomerase protein N-terminus 39 90 1.7E-14 T 11-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal SYN_01084 d91a38b9ebd152bed7baeb85f90bf961 288 Gene3D G3DSA:3.40.50.10740 2 141 6.7E-32 T 11-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal SYN_01084 d91a38b9ebd152bed7baeb85f90bf961 288 SUPERFAMILY SSF141986 143 275 4.58E-36 T 11-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily SYN_01084 d91a38b9ebd152bed7baeb85f90bf961 288 Pfam PF02016 LD-carboxypeptidase 5 269 1.1E-65 T 11-10-2018 IPR003507 Peptidase family S66 SYN_01084 d91a38b9ebd152bed7baeb85f90bf961 288 SUPERFAMILY SSF52317 4 139 9.15E-32 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like SYN_01084 d91a38b9ebd152bed7baeb85f90bf961 288 Gene3D G3DSA:3.50.30.60 152 277 2.1E-31 T 11-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily SYN_01084 d91a38b9ebd152bed7baeb85f90bf961 288 PIRSF PIRSF028757 1 284 5.6E-88 T 11-10-2018 IPR003507 Peptidase family S66 SYN_01451 51ffbbe9414ca2a9e6595b1a90f59533 254 SUPERFAMILY SSF51366 1 252 4.47E-70 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 SYN_01451 51ffbbe9414ca2a9e6595b1a90f59533 254 Gene3D G3DSA:3.20.20.70 3 254 1.3E-88 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_01451 51ffbbe9414ca2a9e6595b1a90f59533 254 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 5 252 7.1E-92 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 SYN_01451 51ffbbe9414ca2a9e6595b1a90f59533 254 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 253 41.269 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 SYN_01451 51ffbbe9414ca2a9e6595b1a90f59533 254 Pfam PF00977 Histidine biosynthesis protein 5 236 8.3E-75 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 SYN_02241 cfdbcb3253e7671fb1a83e7d0fc939fa 386 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 1 374 23.975 T 11-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 SYN_02241 cfdbcb3253e7671fb1a83e7d0fc939fa 386 Gene3D G3DSA:3.100.10.20 1 78 6.8E-20 T 11-10-2018 SYN_02241 cfdbcb3253e7671fb1a83e7d0fc939fa 386 Pfam PF01867 CRISPR associated protein Cas1 3 265 2.4E-82 T 11-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 SYN_02241 cfdbcb3253e7671fb1a83e7d0fc939fa 386 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 3 265 2.0E-68 T 11-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 SYN_00819 74d5def5752bf590fc041a13088d8e15 264 Pfam PF00535 Glycosyl transferase family 2 9 143 3.3E-23 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 SYN_00819 74d5def5752bf590fc041a13088d8e15 264 SUPERFAMILY SSF53448 8 199 2.58E-39 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_00819 74d5def5752bf590fc041a13088d8e15 264 Gene3D G3DSA:3.90.550.10 3 238 6.0E-40 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_00037 54de6ddd6b439d5b8604cf824135f691 164 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 45 4.7E-10 T 11-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain SYN_00037 54de6ddd6b439d5b8604cf824135f691 164 Pfam PF09723 Zinc ribbon domain 1 42 2.2E-9 T 11-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain SYN_00037 54de6ddd6b439d5b8604cf824135f691 164 SMART SM00834 1 43 1.3E-9 T 11-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain SYN_01969 ddefc8833b18f2e0221b26cdf982367f 305 Gene3D G3DSA:1.10.20.140 115 180 4.5E-76 T 11-10-2018 SYN_01969 ddefc8833b18f2e0221b26cdf982367f 305 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 5 300 23.862 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 SYN_01969 ddefc8833b18f2e0221b26cdf982367f 305 SUPERFAMILY SSF52540 5 224 1.89E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01969 ddefc8833b18f2e0221b26cdf982367f 305 Pfam PF01715 IPP transferase 38 278 2.2E-59 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 SYN_01969 ddefc8833b18f2e0221b26cdf982367f 305 Gene3D G3DSA:3.40.50.300 9 279 4.5E-76 T 11-10-2018 SYN_01969 ddefc8833b18f2e0221b26cdf982367f 305 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 6 288 6.7E-59 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 SYN_01969 ddefc8833b18f2e0221b26cdf982367f 305 SUPERFAMILY SSF52540 5 139 6.62E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01244 7601cb670b284736bf71908ae76f2d8f 287 SUPERFAMILY SSF56300 8 282 2.11E-52 T 11-10-2018 SYN_01244 7601cb670b284736bf71908ae76f2d8f 287 Pfam PF00149 Calcineurin-like phosphoesterase 8 241 1.7E-11 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 SYN_01244 7601cb670b284736bf71908ae76f2d8f 287 ProSitePatterns PS00785 5'-nucleotidase signature 1. 8 20 - T 11-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 SYN_00571 666b33582137d0518aab2508fac3d427 232 SUPERFAMILY SSF51419 4 228 1.44E-73 T 11-10-2018 IPR029066 PLP-binding barrel SYN_00571 666b33582137d0518aab2508fac3d427 232 Pfam PF01168 Alanine racemase, N-terminal domain 4 230 1.1E-26 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 SYN_00571 666b33582137d0518aab2508fac3d427 232 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 6 230 1.9E-55 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 SYN_00571 666b33582137d0518aab2508fac3d427 232 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 8 229 29.84 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 SYN_00571 666b33582137d0518aab2508fac3d427 232 Gene3D G3DSA:3.20.20.10 2 232 8.0E-87 T 11-10-2018 IPR029066 PLP-binding barrel SYN_00571 666b33582137d0518aab2508fac3d427 232 PIRSF PIRSF004848 1 232 6.9E-74 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 SYN_01324 254dafc7b61289d57ea5c34396cfe836 356 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 190 352 3.4E-50 T 11-10-2018 IPR000160 GGDEF domain SYN_01324 254dafc7b61289d57ea5c34396cfe836 356 SUPERFAMILY SSF55073 197 352 4.32E-50 T 11-10-2018 IPR029787 Nucleotide cyclase SYN_01324 254dafc7b61289d57ea5c34396cfe836 356 SMART SM00267 181 353 7.6E-56 T 11-10-2018 IPR000160 GGDEF domain SYN_01324 254dafc7b61289d57ea5c34396cfe836 356 Pfam PF00990 Diguanylate cyclase, GGDEF domain 193 349 1.5E-44 T 11-10-2018 IPR000160 GGDEF domain SYN_01324 254dafc7b61289d57ea5c34396cfe836 356 Gene3D G3DSA:3.30.70.270 186 355 7.8E-57 T 11-10-2018 SYN_02987 113d35ce8d0685d5d31963e8449afbc2 420 Pfam PF00872 Transposase, Mutator family 38 394 2.7E-95 T 11-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 SYN_02361 4ee306b419e50f4bd0c6f4727f1281d8 540 Pfam PF01966 HD domain 236 294 3.3E-7 T 11-10-2018 IPR006674 HD domain SYN_02361 4ee306b419e50f4bd0c6f4727f1281d8 540 SUPERFAMILY SSF55781 21 210 7.2E-29 T 11-10-2018 SYN_02361 4ee306b419e50f4bd0c6f4727f1281d8 540 Gene3D G3DSA:1.10.3210.10 215 314 4.8E-20 T 11-10-2018 SYN_02361 4ee306b419e50f4bd0c6f4727f1281d8 540 Gene3D G3DSA:1.10.3210.10 396 527 1.8E-32 T 11-10-2018 SYN_02361 4ee306b419e50f4bd0c6f4727f1281d8 540 SUPERFAMILY SSF109604 215 483 1.43E-13 T 11-10-2018 SYN_02361 4ee306b419e50f4bd0c6f4727f1281d8 540 Pfam PF13487 HD domain 404 469 9.2E-20 T 11-10-2018 SYN_02361 4ee306b419e50f4bd0c6f4727f1281d8 540 Pfam PF01590 GAF domain 38 203 1.1E-17 T 11-10-2018 IPR003018 GAF domain GO:0005515 SYN_02361 4ee306b419e50f4bd0c6f4727f1281d8 540 SMART SM00471 230 487 7.4E-8 T 11-10-2018 IPR003607 HD/PDEase domain SYN_02361 4ee306b419e50f4bd0c6f4727f1281d8 540 SMART SM00065 38 213 4.0E-22 T 11-10-2018 IPR003018 GAF domain GO:0005515 SYN_02361 4ee306b419e50f4bd0c6f4727f1281d8 540 Gene3D G3DSA:3.30.450.40 6 214 1.5E-42 T 11-10-2018 IPR029016 GAF-like domain superfamily SYN_01699 9c88d5cf7af68cb3edf6e25646badd17 414 Gene3D G3DSA:1.10.540.10 9 135 3.2E-30 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 SYN_01699 9c88d5cf7af68cb3edf6e25646badd17 414 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 266 413 2.5E-35 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SYN_01699 9c88d5cf7af68cb3edf6e25646badd17 414 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 139 151 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 SYN_01699 9c88d5cf7af68cb3edf6e25646badd17 414 Gene3D G3DSA:2.40.110.10 136 269 3.4E-26 T 11-10-2018 SYN_01699 9c88d5cf7af68cb3edf6e25646badd17 414 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 22 130 3.4E-23 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 SYN_01699 9c88d5cf7af68cb3edf6e25646badd17 414 SUPERFAMILY SSF56645 17 262 5.37E-54 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 SYN_01699 9c88d5cf7af68cb3edf6e25646badd17 414 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 137 252 2.5E-19 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 SYN_01699 9c88d5cf7af68cb3edf6e25646badd17 414 Gene3D G3DSA:1.20.140.10 270 414 1.7E-39 T 11-10-2018 SYN_01699 9c88d5cf7af68cb3edf6e25646badd17 414 SUPERFAMILY SSF47203 266 413 9.83E-41 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 SYN_00042 4ce26cc8e7325aa9780ef914257113d6 257 SUPERFAMILY SSF52467 2 251 5.45E-85 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily SYN_00042 4ce26cc8e7325aa9780ef914257113d6 257 Gene3D G3DSA:3.40.50.1220 14 246 4.9E-84 T 11-10-2018 SYN_00042 4ce26cc8e7325aa9780ef914257113d6 257 Pfam PF02146 Sir2 family 23 203 7.0E-54 T 11-10-2018 IPR003000 Sirtuin family GO:0070403 SYN_00042 4ce26cc8e7325aa9780ef914257113d6 257 Gene3D G3DSA:3.30.1600.10 32 173 4.9E-84 T 11-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily SYN_00092 e60abc99319e1b4ea668aaf46a45d5d1 164 Hamap MF_01032 Methanogen homoaconitase small subunit [hacB]. 3 163 38.736 T 11-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 SYN_00092 e60abc99319e1b4ea668aaf46a45d5d1 164 TIGRFAM TIGR02087 LEUD_arch: 3-isopropylmalate dehydratase, small subunit 5 160 1.9E-65 T 11-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 SYN_00092 e60abc99319e1b4ea668aaf46a45d5d1 164 Pfam PF00694 Aconitase C-terminal domain 48 100 2.6E-20 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 SYN_00092 e60abc99319e1b4ea668aaf46a45d5d1 164 Gene3D G3DSA:3.20.19.10 1 163 6.0E-60 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 SYN_00092 e60abc99319e1b4ea668aaf46a45d5d1 164 SUPERFAMILY SSF52016 3 161 8.24E-52 T 11-10-2018 SYN_02847 942006a57e05febd9f0316b93e254506 175 SUPERFAMILY SSF55729 19 166 2.66E-31 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase SYN_02847 942006a57e05febd9f0316b93e254506 175 Gene3D G3DSA:3.40.630.30 20 170 9.3E-41 T 11-10-2018 SYN_02847 942006a57e05febd9f0316b93e254506 175 Pfam PF00583 Acetyltransferase (GNAT) family 30 142 1.7E-17 T 11-10-2018 IPR000182 GNAT domain SYN_02847 942006a57e05febd9f0316b93e254506 175 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 28 162 1.5E-34 T 11-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 SYN_02583 e91171502db87b9cad3e3e19250d32e6 439 Pfam PF11700 Vacuole effluxer Atg22 like 21 145 1.2E-6 T 11-10-2018 IPR024671 Autophagy-related protein 22-like SYN_02583 e91171502db87b9cad3e3e19250d32e6 439 Pfam PF11700 Vacuole effluxer Atg22 like 153 438 1.9E-43 T 11-10-2018 IPR024671 Autophagy-related protein 22-like SYN_02583 e91171502db87b9cad3e3e19250d32e6 439 Gene3D G3DSA:1.20.1250.20 29 221 3.0E-8 T 11-10-2018 SYN_02583 e91171502db87b9cad3e3e19250d32e6 439 Gene3D G3DSA:1.20.1250.20 237 435 5.8E-17 T 11-10-2018 SYN_02583 e91171502db87b9cad3e3e19250d32e6 439 SUPERFAMILY SSF103473 33 431 1.44E-36 T 11-10-2018 IPR036259 MFS transporter superfamily SYN_02291 80b917ae0ce3347b3e40aa5b2d825b56 106 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 9 95 3.1E-7 T 11-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative SYN_00576 ede1e2f940ad0ebc9f563c28ed6e1faa 151 SUPERFAMILY SSF51182 2 148 1.06E-38 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily SYN_00576 ede1e2f940ad0ebc9f563c28ed6e1faa 151 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 2 147 1.4E-15 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SYN_00576 ede1e2f940ad0ebc9f563c28ed6e1faa 151 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 2 147 3.0E-19 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SYN_00576 ede1e2f940ad0ebc9f563c28ed6e1faa 151 Gene3D G3DSA:2.60.120.10 1 150 5.0E-52 T 11-10-2018 IPR014710 RmlC-like jelly roll fold SYN_02497 4ad20482e9255d8faec8e68c3b0cdae4 105 SUPERFAMILY SSF54862 37 97 9.11E-19 T 11-10-2018 SYN_02497 4ad20482e9255d8faec8e68c3b0cdae4 105 Pfam PF12838 4Fe-4S dicluster domain 46 88 6.0E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_02497 4ad20482e9255d8faec8e68c3b0cdae4 105 Gene3D G3DSA:3.30.70.20 37 103 4.1E-14 T 11-10-2018 SYN_02497 4ad20482e9255d8faec8e68c3b0cdae4 105 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 77 88 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_02477 dfbc206fa3568b102ee0692ebaa26218 256 PIRSF PIRSF029950 1 236 1.4E-58 T 11-10-2018 IPR010155 CRISPR pre-crRNA endoribonuclease Cas5d GO:0004519|GO:0051607 SYN_02477 dfbc206fa3568b102ee0692ebaa26218 256 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 8 215 6.1E-50 T 11-10-2018 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 SYN_02477 dfbc206fa3568b102ee0692ebaa26218 256 TIGRFAM TIGR01876 cas_Cas5d: CRISPR-associated protein Cas5, subtype I-C/DVULG 11 222 8.0E-64 T 11-10-2018 IPR010155 CRISPR pre-crRNA endoribonuclease Cas5d GO:0004519|GO:0051607 SYN_02477 dfbc206fa3568b102ee0692ebaa26218 256 Gene3D G3DSA:3.30.70.2660 3 239 5.8E-78 T 11-10-2018 SYN_02477 dfbc206fa3568b102ee0692ebaa26218 256 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 9 52 8.1E-14 T 11-10-2018 IPR013422 CRISPR-associated protein Cas5, N-terminal SYN_01418 9ce413afc0e63695501a827e7ee2d006 557 Pfam PF01476 LysM domain 120 172 2.1E-4 T 11-10-2018 IPR018392 LysM domain SYN_01418 9ce413afc0e63695501a827e7ee2d006 557 Pfam PF01476 LysM domain 49 97 2.9E-7 T 11-10-2018 IPR018392 LysM domain SYN_01418 9ce413afc0e63695501a827e7ee2d006 557 SUPERFAMILY SSF54106 48 97 2.22E-5 T 11-10-2018 SYN_01418 9ce413afc0e63695501a827e7ee2d006 557 Gene3D G3DSA:3.10.350.10 107 177 8.7E-7 T 11-10-2018 IPR036779 LysM domain superfamily SYN_01418 9ce413afc0e63695501a827e7ee2d006 557 SMART SM00257 119 172 0.033 T 11-10-2018 IPR018392 LysM domain SYN_01418 9ce413afc0e63695501a827e7ee2d006 557 SMART SM00257 48 97 1.6E-6 T 11-10-2018 IPR018392 LysM domain SYN_01418 9ce413afc0e63695501a827e7ee2d006 557 Gene3D G3DSA:3.10.350.10 44 106 1.3E-9 T 11-10-2018 IPR036779 LysM domain superfamily SYN_02089 c97521d2ddc846cbf0ae1ff667365e02 214 Gene3D G3DSA:3.40.30.10 101 212 4.4E-30 T 11-10-2018 SYN_02089 c97521d2ddc846cbf0ae1ff667365e02 214 PRINTS PR00421 Thioredoxin family signature 127 135 6.6E-7 T 11-10-2018 SYN_02089 c97521d2ddc846cbf0ae1ff667365e02 214 PRINTS PR00421 Thioredoxin family signature 135 144 6.6E-7 T 11-10-2018 SYN_02089 c97521d2ddc846cbf0ae1ff667365e02 214 PRINTS PR00421 Thioredoxin family signature 175 186 6.6E-7 T 11-10-2018 SYN_02089 c97521d2ddc846cbf0ae1ff667365e02 214 SUPERFAMILY SSF52833 30 209 2.72E-36 T 11-10-2018 IPR036249 Thioredoxin-like superfamily SYN_02089 c97521d2ddc846cbf0ae1ff667365e02 214 Pfam PF00085 Thioredoxin 111 207 5.4E-26 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 SYN_02089 c97521d2ddc846cbf0ae1ff667365e02 214 TIGRFAM TIGR01068 thioredoxin: thioredoxin 117 207 2.9E-30 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SYN_02089 c97521d2ddc846cbf0ae1ff667365e02 214 Gene3D G3DSA:2.20.28.140 66 100 5.0E-18 T 11-10-2018 SYN_02089 c97521d2ddc846cbf0ae1ff667365e02 214 Gene3D G3DSA:2.20.28.140 31 65 5.4E-17 T 11-10-2018 SYN_02089 c97521d2ddc846cbf0ae1ff667365e02 214 ProSitePatterns PS00194 Thioredoxin family active site. 128 146 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 SYN_01569 0f9c0633a63ea97ff69a62a580eee6a5 176 SUPERFAMILY SSF111384 26 168 2.09E-29 T 11-10-2018 SYN_01569 0f9c0633a63ea97ff69a62a580eee6a5 176 Gene3D G3DSA:3.30.910.20 16 176 2.2E-32 T 11-10-2018 IPR024930 Skp domain superfamily SYN_01569 0f9c0633a63ea97ff69a62a580eee6a5 176 Pfam PF03938 Outer membrane protein (OmpH-like) 16 167 9.1E-32 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 SYN_01569 0f9c0633a63ea97ff69a62a580eee6a5 176 SMART SM00935 15 169 4.2E-47 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 SYN_01173 936f67c7a21bf979a60b3aa179a563fb 329 Pfam PF13394 4Fe-4S single cluster domain 30 118 4.6E-5 T 11-10-2018 SYN_01173 936f67c7a21bf979a60b3aa179a563fb 329 Pfam PF04055 Radical SAM superfamily 28 185 9.1E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_01173 936f67c7a21bf979a60b3aa179a563fb 329 SUPERFAMILY SSF46785 251 314 2.64E-5 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_01173 936f67c7a21bf979a60b3aa179a563fb 329 SUPERFAMILY SSF102114 27 217 1.7E-20 T 11-10-2018 SYN_01173 936f67c7a21bf979a60b3aa179a563fb 329 Gene3D G3DSA:3.20.20.70 24 274 1.5E-21 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_00133 3a4c12340a99813aade04ad8010adfd9 292 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 9 285 3.3E-61 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 SYN_00133 3a4c12340a99813aade04ad8010adfd9 292 PIRSF PIRSF026649 3 292 3.1E-82 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 SYN_02061 602d3b618b00d1ed8f37f90ecd005314 227 Pfam PF01863 Protein of unknown function DUF45 14 219 4.6E-56 T 11-10-2018 IPR002725 Protein of unknown function DUF45 SYN_02061 602d3b618b00d1ed8f37f90ecd005314 227 Gene3D G3DSA:3.30.2010.10 130 218 3.0E-15 T 11-10-2018 SYN_02936 22db6976d11811935b724919ef7e00d9 96 ProSitePatterns PS00151 Acylphosphatase signature 2. 33 49 - T 11-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SYN_02936 22db6976d11811935b724919ef7e00d9 96 Pfam PF00708 Acylphosphatase 5 89 1.2E-25 T 11-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SYN_02936 22db6976d11811935b724919ef7e00d9 96 SUPERFAMILY SSF54975 1 90 2.4E-29 T 11-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SYN_02936 22db6976d11811935b724919ef7e00d9 96 ProSitePatterns PS00150 Acylphosphatase signature 1. 9 19 - T 11-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SYN_02936 22db6976d11811935b724919ef7e00d9 96 Gene3D G3DSA:3.30.70.100 1 90 7.6E-32 T 11-10-2018 SYN_01884 fe7d5d76a56b1d5a6b86c37eb7b65c14 136 SUPERFAMILY SSF53955 19 133 2.69E-39 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily SYN_01884 fe7d5d76a56b1d5a6b86c37eb7b65c14 136 Gene3D G3DSA:1.10.530.10 20 135 1.5E-21 T 11-10-2018 SYN_01884 fe7d5d76a56b1d5a6b86c37eb7b65c14 136 Pfam PF01464 Transglycosylase SLT domain 22 124 3.0E-24 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 SYN_02302 77320a6db26cf1577abde8cb9e95e109 401 Pfam PF04233 Phage Mu protein F like protein 63 179 9.8E-13 T 11-10-2018 IPR006528 Phage head morphogenesis domain SYN_02138 b54b56439b6d10b4a9f6d4bb7da53cff 536 Pfam PF00384 Molybdopterin oxidoreductase 7 339 3.5E-67 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02138 b54b56439b6d10b4a9f6d4bb7da53cff 536 Gene3D G3DSA:3.40.50.740 193 381 2.8E-145 T 11-10-2018 SYN_02138 b54b56439b6d10b4a9f6d4bb7da53cff 536 Gene3D G3DSA:2.40.40.20 412 534 1.6E-45 T 11-10-2018 SYN_02138 b54b56439b6d10b4a9f6d4bb7da53cff 536 Pfam PF01568 Molydopterin dinucleotide binding domain 422 527 9.6E-29 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 SYN_02138 b54b56439b6d10b4a9f6d4bb7da53cff 536 SUPERFAMILY SSF50692 377 534 1.58E-48 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily SYN_02138 b54b56439b6d10b4a9f6d4bb7da53cff 536 SUPERFAMILY SSF53706 2 376 8.11E-140 T 11-10-2018 SYN_02138 b54b56439b6d10b4a9f6d4bb7da53cff 536 Gene3D G3DSA:3.40.228.10 2 192 2.8E-145 T 11-10-2018 SYN_01768 8ad3998633db896c7785f0629ea9058d 129 SUPERFAMILY SSF51230 4 127 9.14E-38 T 11-10-2018 IPR011053 Single hybrid motif SYN_01768 8ad3998633db896c7785f0629ea9058d 129 Pfam PF01597 Glycine cleavage H-protein 8 127 2.6E-34 T 11-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate SYN_01768 8ad3998633db896c7785f0629ea9058d 129 Gene3D G3DSA:2.40.50.100 3 129 4.8E-43 T 11-10-2018 SYN_01768 8ad3998633db896c7785f0629ea9058d 129 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 126 30.185 T 11-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 SYN_03234 cb2b57f2b7a9e4698ce4f7d5a1a47e71 264 Pfam PF01184 GPR1/FUN34/yaaH family 126 258 9.7E-21 T 11-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 SYN_00855 cab7f50fd53a3d5de81430f75dced79c 703 SMART SM00028 41 74 120.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00855 cab7f50fd53a3d5de81430f75dced79c 703 SMART SM00028 266 299 430.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00855 cab7f50fd53a3d5de81430f75dced79c 703 SMART SM00028 111 144 27.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00855 cab7f50fd53a3d5de81430f75dced79c 703 SMART SM00028 231 264 150.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00855 cab7f50fd53a3d5de81430f75dced79c 703 SMART SM00028 145 178 27.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00855 cab7f50fd53a3d5de81430f75dced79c 703 SMART SM00028 300 333 16.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 SYN_00855 cab7f50fd53a3d5de81430f75dced79c 703 Gene3D G3DSA:1.25.40.10 231 413 2.6E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00855 cab7f50fd53a3d5de81430f75dced79c 703 Pfam PF13432 Tetratricopeptide repeat 116 168 1.2E-6 T 11-10-2018 SYN_00855 cab7f50fd53a3d5de81430f75dced79c 703 Gene3D G3DSA:1.25.40.10 24 219 8.2E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00855 cab7f50fd53a3d5de81430f75dced79c 703 Pfam PF14559 Tetratricopeptide repeat 280 340 5.9E-9 T 11-10-2018 SYN_00855 cab7f50fd53a3d5de81430f75dced79c 703 SUPERFAMILY SSF48452 91 336 4.04E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_02736 419316b3b496abfa69abab030d5542d7 114 SMART SM00530 32 86 2.8E-5 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SYN_02736 419316b3b496abfa69abab030d5542d7 114 Pfam PF13744 Helix-turn-helix domain 22 87 3.3E-14 T 11-10-2018 IPR039554 HigA2-like, helix-turn-helix domain SYN_02736 419316b3b496abfa69abab030d5542d7 114 SUPERFAMILY SSF47413 30 96 1.3E-14 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 SYN_02736 419316b3b496abfa69abab030d5542d7 114 Gene3D G3DSA:1.10.260.40 13 88 1.0E-11 T 11-10-2018 SYN_02258 9b8d647d3cffa57205d89fd1b7c5804c 167 Pfam PF00072 Response regulator receiver domain 48 159 1.3E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_02258 9b8d647d3cffa57205d89fd1b7c5804c 167 SMART SM00448 46 159 2.4E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_02258 9b8d647d3cffa57205d89fd1b7c5804c 167 SUPERFAMILY SSF52172 47 164 1.57E-33 T 11-10-2018 IPR011006 CheY-like superfamily SYN_02258 9b8d647d3cffa57205d89fd1b7c5804c 167 Gene3D G3DSA:3.40.50.2300 45 167 3.3E-33 T 11-10-2018 SYN_00929 0917e330f65d99b663b679b0378338c3 491 Pfam PF00072 Response regulator receiver domain 355 470 8.5E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00929 0917e330f65d99b663b679b0378338c3 491 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 213 332 1.3E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_00929 0917e330f65d99b663b679b0378338c3 491 Gene3D G3DSA:1.10.287.130 99 170 6.4E-15 T 11-10-2018 SYN_00929 0917e330f65d99b663b679b0378338c3 491 SMART SM00448 353 470 1.0E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00929 0917e330f65d99b663b679b0378338c3 491 SUPERFAMILY SSF55874 190 333 2.1E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_00929 0917e330f65d99b663b679b0378338c3 491 SUPERFAMILY SSF52172 353 475 9.82E-26 T 11-10-2018 IPR011006 CheY-like superfamily SYN_00929 0917e330f65d99b663b679b0378338c3 491 SMART SM00387 212 334 1.2E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_00929 0917e330f65d99b663b679b0378338c3 491 SUPERFAMILY SSF47384 103 169 2.75E-5 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SYN_00929 0917e330f65d99b663b679b0378338c3 491 Gene3D G3DSA:3.40.50.2300 343 477 1.6E-25 T 11-10-2018 SYN_00929 0917e330f65d99b663b679b0378338c3 491 Gene3D G3DSA:3.30.565.10 176 342 1.0E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_00929 0917e330f65d99b663b679b0378338c3 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 294 312 4.7E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_00929 0917e330f65d99b663b679b0378338c3 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 279 289 4.7E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_00929 0917e330f65d99b663b679b0378338c3 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 318 331 4.7E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_00929 0917e330f65d99b663b679b0378338c3 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 261 275 4.7E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01790 36a9e31b134c54999610469dc064e21e 160 Pfam PF02576 RimP N-terminal domain 16 88 4.7E-24 T 11-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal SYN_01790 36a9e31b134c54999610469dc064e21e 160 Gene3D G3DSA:3.30.300.70 4 85 4.1E-25 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily SYN_01790 36a9e31b134c54999610469dc064e21e 160 SUPERFAMILY SSF74942 89 160 1.26E-13 T 11-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily SYN_01790 36a9e31b134c54999610469dc064e21e 160 SUPERFAMILY SSF75420 6 88 4.32E-25 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily SYN_01790 36a9e31b134c54999610469dc064e21e 160 Pfam PF17384 RimP C-terminal SH3 domain 91 160 6.1E-12 T 11-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal SYN_01790 36a9e31b134c54999610469dc064e21e 160 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 11 160 24.972 T 11-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 SYN_03818 3f32f32276b14f95ccf7b29d79d66ba0 170 SMART SM00450 55 165 8.4E-4 T 11-10-2018 IPR001763 Rhodanese-like domain SYN_03818 3f32f32276b14f95ccf7b29d79d66ba0 170 Gene3D G3DSA:3.40.250.10 31 169 4.1E-22 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily SYN_03818 3f32f32276b14f95ccf7b29d79d66ba0 170 SUPERFAMILY SSF52821 50 168 5.37E-24 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily SYN_03818 3f32f32276b14f95ccf7b29d79d66ba0 170 Pfam PF00581 Rhodanese-like domain 55 161 2.7E-15 T 11-10-2018 IPR001763 Rhodanese-like domain SYN_00667 72ab645c0203a1f3bad686d8ec5f160e 331 SUPERFAMILY SSF53335 80 309 4.18E-38 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_00667 72ab645c0203a1f3bad686d8ec5f160e 331 Gene3D G3DSA:2.20.25.110 225 283 7.6E-43 T 11-10-2018 SYN_00667 72ab645c0203a1f3bad686d8ec5f160e 331 Pfam PF13649 Methyltransferase domain 121 217 1.8E-19 T 11-10-2018 SYN_00667 72ab645c0203a1f3bad686d8ec5f160e 331 Gene3D G3DSA:3.40.50.150 100 305 7.6E-43 T 11-10-2018 SYN_01231 c93b47801b518a19b53b5b7c4127f157 231 SUPERFAMILY SSF52540 29 229 6.02E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01231 c93b47801b518a19b53b5b7c4127f157 231 Gene3D G3DSA:3.40.50.300 25 229 5.7E-57 T 11-10-2018 SYN_01231 c93b47801b518a19b53b5b7c4127f157 231 Pfam PF13189 Cytidylate kinase-like family 31 212 1.2E-54 T 11-10-2018 SYN_00942 834d142adad30d8e450931ab6cd642f5 300 Pfam PF07475 HPr Serine kinase C-terminal domain 145 277 2.9E-29 T 11-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 SYN_00942 834d142adad30d8e450931ab6cd642f5 300 Gene3D G3DSA:3.40.50.300 142 297 2.8E-35 T 11-10-2018 SYN_00942 834d142adad30d8e450931ab6cd642f5 300 SUPERFAMILY SSF53795 146 274 7.63E-21 T 11-10-2018 SYN_00202 b0ac14dfef01cd5737f069dfa83f13c9 223 Pfam PF14371 Domain of unknown function (DUF4412) 60 164 2.8E-5 T 11-10-2018 IPR025524 Domain of unknown function DUF4412 SYN_00202 b0ac14dfef01cd5737f069dfa83f13c9 223 Gene3D G3DSA:2.50.20.10 30 206 7.7E-7 T 11-10-2018 SYN_02639 0f2da4eaf5b93deaa96e41fbf52ea295 489 Gene3D G3DSA:2.40.160.60 59 489 1.7E-80 T 11-10-2018 SYN_02639 0f2da4eaf5b93deaa96e41fbf52ea295 489 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 50 488 7.2E-55 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) SYN_02639 0f2da4eaf5b93deaa96e41fbf52ea295 489 SUPERFAMILY SSF56935 63 487 4.94E-52 T 11-10-2018 SYN_01465 d850d1fe289a47e4e448256b7c1b09c2 415 Pfam PF00989 PAS fold 60 162 6.3E-8 T 11-10-2018 IPR013767 PAS fold GO:0006355 SYN_01465 d850d1fe289a47e4e448256b7c1b09c2 415 SUPERFAMILY SSF47384 169 241 3.53E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 SYN_01465 d850d1fe289a47e4e448256b7c1b09c2 415 SMART SM00388 180 245 3.6E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_01465 d850d1fe289a47e4e448256b7c1b09c2 415 Pfam PF00512 His Kinase A (phospho-acceptor) domain 180 241 2.2E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SYN_01465 d850d1fe289a47e4e448256b7c1b09c2 415 Gene3D G3DSA:3.30.565.10 247 411 2.3E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_01465 d850d1fe289a47e4e448256b7c1b09c2 415 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 55 170 6.7E-8 T 11-10-2018 IPR000014 PAS domain SYN_01465 d850d1fe289a47e4e448256b7c1b09c2 415 SMART SM00387 287 403 5.3E-32 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_01465 d850d1fe289a47e4e448256b7c1b09c2 415 Gene3D G3DSA:3.30.450.20 45 163 4.6E-18 T 11-10-2018 SYN_01465 d850d1fe289a47e4e448256b7c1b09c2 415 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 362 1.5E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01465 d850d1fe289a47e4e448256b7c1b09c2 415 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 381 1.5E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01465 d850d1fe289a47e4e448256b7c1b09c2 415 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 348 1.5E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01465 d850d1fe289a47e4e448256b7c1b09c2 415 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 400 1.5E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 SYN_01465 d850d1fe289a47e4e448256b7c1b09c2 415 Gene3D G3DSA:1.10.287.130 165 244 1.8E-16 T 11-10-2018 SYN_01465 d850d1fe289a47e4e448256b7c1b09c2 415 SUPERFAMILY SSF55874 249 400 1.44E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_01465 d850d1fe289a47e4e448256b7c1b09c2 415 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 287 401 1.5E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase SYN_01465 d850d1fe289a47e4e448256b7c1b09c2 415 SMART SM00091 58 125 0.001 T 11-10-2018 IPR000014 PAS domain SYN_01465 d850d1fe289a47e4e448256b7c1b09c2 415 SUPERFAMILY SSF55785 45 163 6.81E-12 T 11-10-2018 IPR035965 PAS domain superfamily SYN_00742 b5d53b73a5de01edcd4ce9eed2400a0e 296 Pfam PF01882 Protein of unknown function DUF58 185 261 3.3E-16 T 11-10-2018 IPR002881 Domain of unknown function DUF58 SYN_02057 0a0b90c16b9e71b5bfff6606a74489a2 248 SUPERFAMILY SSF53448 3 245 4.51E-58 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_02057 0a0b90c16b9e71b5bfff6606a74489a2 248 Pfam PF02348 Cytidylyltransferase 5 215 5.0E-53 T 11-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 SYN_02057 0a0b90c16b9e71b5bfff6606a74489a2 248 Gene3D G3DSA:3.90.550.10 1 244 4.2E-86 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_02057 0a0b90c16b9e71b5bfff6606a74489a2 248 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 2 244 39.982 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 SYN_02057 0a0b90c16b9e71b5bfff6606a74489a2 248 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 4 236 9.3E-72 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 SYN_00896 dabd255ff6909428a6e22a2a29bfd97b 1155 Pfam PF14579 Helix-hairpin-helix motif 803 892 5.2E-29 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SYN_00896 dabd255ff6909428a6e22a2a29bfd97b 1155 Pfam PF02811 PHP domain 8 180 2.4E-57 T 11-10-2018 IPR004013 PHP domain GO:0003824 SYN_00896 dabd255ff6909428a6e22a2a29bfd97b 1155 Gene3D G3DSA:1.10.150.870 746 880 1.2E-8 T 11-10-2018 SYN_00896 dabd255ff6909428a6e22a2a29bfd97b 1155 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1029 0.0 T 11-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SYN_00896 dabd255ff6909428a6e22a2a29bfd97b 1155 SMART SM00481 7 74 4.3E-33 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal SYN_00896 dabd255ff6909428a6e22a2a29bfd97b 1155 Gene3D G3DSA:3.20.20.140 1 278 1.2E-113 T 11-10-2018 SYN_00896 dabd255ff6909428a6e22a2a29bfd97b 1155 SUPERFAMILY SSF89550 6 271 1.41E-42 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 SYN_00896 dabd255ff6909428a6e22a2a29bfd97b 1155 Gene3D G3DSA:1.10.10.1600 440 516 2.9E-27 T 11-10-2018 SYN_00896 dabd255ff6909428a6e22a2a29bfd97b 1155 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 300 730 9.6E-171 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SYN_00540 b6b8657b6649f7adf67d399e8a2ce462 84 Pfam PF09413 Putative prokaryotic signal transducing protein 14 76 2.5E-9 T 11-10-2018 IPR018551 Domain of unknown function DUF2007 SYN_02424 226f580f1796fc9104922458cfef26e9 213 Pfam PF02662 Methyl-viologen-reducing hydrogenase, delta subunit 1 91 1.8E-27 T 11-10-2018 IPR003813 F420-non-reducing hydrogenase iron-sulfur subunit D GO:0055114 SYN_02424 226f580f1796fc9104922458cfef26e9 213 Pfam PF01022 Bacterial regulatory protein, arsR family 162 194 2.9E-8 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SYN_02424 226f580f1796fc9104922458cfef26e9 213 SUPERFAMILY SSF46785 162 206 3.76E-7 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily SYN_02424 226f580f1796fc9104922458cfef26e9 213 Gene3D G3DSA:1.10.10.10 153 213 3.3E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily SYN_02448 916b25f6d284eb6a40565b9d4cf18a7b 125 Gene3D G3DSA:3.10.530.10 52 119 2.4E-14 T 11-10-2018 IPR036593 CPE0013-like superfamily SYN_02448 916b25f6d284eb6a40565b9d4cf18a7b 125 Pfam PF07892 Protein of unknown function (DUF1667) 38 119 3.9E-26 T 11-10-2018 IPR012460 Protein of unknown function DUF1667 SYN_02448 916b25f6d284eb6a40565b9d4cf18a7b 125 SUPERFAMILY SSF160148 50 122 1.28E-21 T 11-10-2018 IPR036593 CPE0013-like superfamily SYN_03791 69c02ce3876a45ada91b7a05724f5902 130 PRINTS PR01651 Protein-export SecG membrane protein signature 37 53 1.4E-16 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SYN_03791 69c02ce3876a45ada91b7a05724f5902 130 PRINTS PR01651 Protein-export SecG membrane protein signature 53 75 1.4E-16 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SYN_03791 69c02ce3876a45ada91b7a05724f5902 130 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 1.4E-16 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SYN_03791 69c02ce3876a45ada91b7a05724f5902 130 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 72 4.0E-23 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SYN_03791 69c02ce3876a45ada91b7a05724f5902 130 Pfam PF03840 Preprotein translocase SecG subunit 5 71 3.1E-20 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SYN_01785 7a915a2940170c013d24fb463498f7fe 123 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 5 109 25.296 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 SYN_01785 7a915a2940170c013d24fb463498f7fe 123 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 114 2.9E-31 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 SYN_01785 7a915a2940170c013d24fb463498f7fe 123 SUPERFAMILY SSF89919 2 112 1.44E-32 T 11-10-2018 IPR023799 Ribosome-binding factor A domain superfamily SYN_01785 7a915a2940170c013d24fb463498f7fe 123 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 96 2.0E-21 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 SYN_01785 7a915a2940170c013d24fb463498f7fe 123 Pfam PF02033 Ribosome-binding factor A 6 109 2.6E-29 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 SYN_01785 7a915a2940170c013d24fb463498f7fe 123 ProSitePatterns PS01319 Ribosome-binding factor A signature. 75 96 - T 11-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 SYN_01785 7a915a2940170c013d24fb463498f7fe 123 Gene3D G3DSA:3.30.300.20 1 118 2.7E-33 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta SYN_00771 09c4e11dbbbce9c0f65a5e91757b1166 212 Pfam PF01351 Ribonuclease HII 20 195 1.7E-36 T 11-10-2018 IPR024567 Ribonuclease HII/HIII domain SYN_00771 09c4e11dbbbce9c0f65a5e91757b1166 212 Hamap MF_00052_B Ribonuclease HII [rnhB]. 18 197 35.285 T 11-10-2018 IPR022898 Ribonuclease HII GO:0004523 SYN_00771 09c4e11dbbbce9c0f65a5e91757b1166 212 Gene3D G3DSA:3.30.420.10 3 210 6.1E-77 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 SYN_00771 09c4e11dbbbce9c0f65a5e91757b1166 212 SUPERFAMILY SSF53098 7 199 5.01E-66 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily SYN_01976 be2c15a41dc19baf121dddabac4b2c71 445 PIRSF PIRSF006446 1 445 7.2E-171 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 SYN_01976 be2c15a41dc19baf121dddabac4b2c71 445 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 434 6.0E-172 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 SYN_00370 3bd27c2ea421ba347fedef2976ad71a0 426 Gene3D G3DSA:3.40.50.11890 69 195 3.2E-33 T 11-10-2018 SYN_00370 3bd27c2ea421ba347fedef2976ad71a0 426 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 76 422 7.5E-80 T 11-10-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit SYN_00370 3bd27c2ea421ba347fedef2976ad71a0 426 Gene3D G3DSA:3.40.50.11900 277 426 4.5E-42 T 11-10-2018 SYN_00370 3bd27c2ea421ba347fedef2976ad71a0 426 Gene3D G3DSA:1.20.1270.370 59 260 3.2E-33 T 11-10-2018 SYN_00922 506410fa0d3643ec28918ce44bb5f757 223 Pfam PF00005 ABC transporter 21 169 1.5E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_00922 506410fa0d3643ec28918ce44bb5f757 223 Gene3D G3DSA:3.40.50.300 1 223 3.4E-65 T 11-10-2018 SYN_00922 506410fa0d3643ec28918ce44bb5f757 223 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_00922 506410fa0d3643ec28918ce44bb5f757 223 SMART SM00382 30 218 1.6E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00922 506410fa0d3643ec28918ce44bb5f757 223 SUPERFAMILY SSF52540 1 221 3.17E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_03787 35733436b08f51f6b296a2f86765128a 90 SUPERFAMILY SSF52833 2 51 3.44E-16 T 11-10-2018 IPR036249 Thioredoxin-like superfamily SYN_03787 35733436b08f51f6b296a2f86765128a 90 Pfam PF00578 AhpC/TSA family 2 51 5.8E-11 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 SYN_03787 35733436b08f51f6b296a2f86765128a 90 ProSitePatterns PS00194 Thioredoxin family active site. 24 42 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 SYN_03787 35733436b08f51f6b296a2f86765128a 90 Gene3D G3DSA:3.40.30.10 1 55 1.2E-16 T 11-10-2018 SYN_01796 fdfb7411e3676ae1c474b2c3b475c586 71 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.5E-23 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_01796 fdfb7411e3676ae1c474b2c3b475c586 71 PRINTS PR01249 Ribosomal protein L31 signature 45 63 3.5E-23 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_01796 fdfb7411e3676ae1c474b2c3b475c586 71 PRINTS PR01249 Ribosomal protein L31 signature 30 45 3.5E-23 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_01796 fdfb7411e3676ae1c474b2c3b475c586 71 SUPERFAMILY SSF143800 1 65 2.9E-26 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01796 fdfb7411e3676ae1c474b2c3b475c586 71 Pfam PF01197 Ribosomal protein L31 1 64 4.5E-32 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_01796 fdfb7411e3676ae1c474b2c3b475c586 71 Gene3D G3DSA:2.30.170.50 1 69 5.8E-32 T 11-10-2018 SYN_01796 fdfb7411e3676ae1c474b2c3b475c586 71 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 67 29.734 T 11-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_01796 fdfb7411e3676ae1c474b2c3b475c586 71 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 1.5E-31 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_01995 9ca75d7479e6e2e4a096a48fd99032bb 409 Pfam PF02687 FtsX-like permease family 315 401 2.3E-11 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 SYN_01995 9ca75d7479e6e2e4a096a48fd99032bb 409 Pfam PF12704 MacB-like periplasmic core domain 22 248 1.7E-44 T 11-10-2018 IPR025857 MacB-like periplasmic core domain SYN_00145 05ee16e39926b44244b4696dafabb037 276 SUPERFAMILY SSF52821 46 161 4.45E-24 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily SYN_00145 05ee16e39926b44244b4696dafabb037 276 SMART SM00450 174 269 1.1E-8 T 11-10-2018 IPR001763 Rhodanese-like domain SYN_00145 05ee16e39926b44244b4696dafabb037 276 SMART SM00450 61 158 1.0E-11 T 11-10-2018 IPR001763 Rhodanese-like domain SYN_00145 05ee16e39926b44244b4696dafabb037 276 Pfam PF00581 Rhodanese-like domain 179 264 2.5E-8 T 11-10-2018 IPR001763 Rhodanese-like domain SYN_00145 05ee16e39926b44244b4696dafabb037 276 Pfam PF00581 Rhodanese-like domain 73 154 1.9E-7 T 11-10-2018 IPR001763 Rhodanese-like domain SYN_00145 05ee16e39926b44244b4696dafabb037 276 Gene3D G3DSA:3.40.250.10 58 173 1.1E-21 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily SYN_00145 05ee16e39926b44244b4696dafabb037 276 SUPERFAMILY SSF52821 167 262 7.73E-20 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily SYN_00145 05ee16e39926b44244b4696dafabb037 276 Gene3D G3DSA:3.40.250.10 174 265 3.1E-16 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily SYN_03180 01e2e42c6a6db8d49509c1af32e8594c 174 SUPERFAMILY SSF46689 37 153 1.38E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SYN_03180 01e2e42c6a6db8d49509c1af32e8594c 174 Pfam PF13551 Winged helix-turn helix 39 107 3.5E-13 T 11-10-2018 SYN_01881 63b944c72c94d373abe6ce624a296b02 128 SUPERFAMILY SSF47413 61 123 2.06E-14 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 SYN_01881 63b944c72c94d373abe6ce624a296b02 128 SMART SM00530 65 121 1.5E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SYN_01881 63b944c72c94d373abe6ce624a296b02 128 Gene3D G3DSA:1.10.260.40 56 125 1.6E-16 T 11-10-2018 SYN_01881 63b944c72c94d373abe6ce624a296b02 128 Pfam PF01381 Helix-turn-helix 68 120 4.9E-15 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SYN_01861 4370270aaf2e3312f5281736ccdb34ae 194 Pfam PF05309 TraE protein 1 182 2.4E-58 T 11-10-2018 IPR007973 Pilus assembly TraE GO:0000746 SYN_00827 72f72f0aa8d53f82a0181068a1d166d4 385 PIRSF PIRSF000390 1 385 2.6E-105 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SYN_00827 72f72f0aa8d53f82a0181068a1d166d4 385 Gene3D G3DSA:3.90.1150.10 259 385 5.4E-30 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SYN_00827 72f72f0aa8d53f82a0181068a1d166d4 385 Gene3D G3DSA:3.40.640.10 1 258 1.0E-88 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SYN_00827 72f72f0aa8d53f82a0181068a1d166d4 385 SUPERFAMILY SSF53383 2 384 1.3E-106 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SYN_00827 72f72f0aa8d53f82a0181068a1d166d4 385 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 9 380 1.6E-110 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SYN_03255 e406215ad63dafa934372d3c04705b30 158 ProSitePatterns PS00052 Ribosomal protein S7 signature. 22 48 - T 11-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_03255 e406215ad63dafa934372d3c04705b30 158 Pfam PF00177 Ribosomal protein S7p/S5e 3 151 3.9E-63 T 11-10-2018 IPR023798 Ribosomal protein S7 domain SYN_03255 e406215ad63dafa934372d3c04705b30 158 SUPERFAMILY SSF47973 5 151 5.49E-58 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily SYN_03255 e406215ad63dafa934372d3c04705b30 158 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 3 158 35.508 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 SYN_03255 e406215ad63dafa934372d3c04705b30 158 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 5 157 2.5E-66 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 SYN_03255 e406215ad63dafa934372d3c04705b30 158 Gene3D G3DSA:1.10.455.10 4 158 3.2E-60 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily SYN_03255 e406215ad63dafa934372d3c04705b30 158 PIRSF PIRSF002122 4 158 2.7E-58 T 11-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 SYN_01072 8162641a9d5be70dddd6a8fafb2cda2b 211 TIGRFAM TIGR03527 selenium_YedF: selenium metabolism protein YedF 5 210 2.2E-73 T 11-10-2018 IPR019870 Selenium metabolism protein YedF SYN_01072 8162641a9d5be70dddd6a8fafb2cda2b 211 Pfam PF02635 DsrE/DsrF-like family 141 205 3.7E-6 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein SYN_01072 8162641a9d5be70dddd6a8fafb2cda2b 211 Gene3D G3DSA:3.30.110.40 3 82 3.2E-22 T 11-10-2018 IPR036868 TusA-like domain superfamily SYN_01072 8162641a9d5be70dddd6a8fafb2cda2b 211 SUPERFAMILY SSF75169 113 201 1.55E-12 T 11-10-2018 IPR027396 DsrEFH-like SYN_01072 8162641a9d5be70dddd6a8fafb2cda2b 211 Pfam PF01206 Sulfurtransferase TusA 3 67 1.7E-15 T 11-10-2018 IPR001455 TusA-like domain SYN_01072 8162641a9d5be70dddd6a8fafb2cda2b 211 SUPERFAMILY SSF64307 2 68 4.19E-14 T 11-10-2018 IPR036868 TusA-like domain superfamily SYN_00312 a45a58fbc5c44cc5f275ef40ea1e0ca6 294 Gene3D G3DSA:3.40.1550.10 1 152 9.3E-44 T 11-10-2018 IPR028976 CheC-like superfamily SYN_00312 a45a58fbc5c44cc5f275ef40ea1e0ca6 294 SUPERFAMILY SSF103039 1 151 2.88E-34 T 11-10-2018 IPR028976 CheC-like superfamily SYN_00312 a45a58fbc5c44cc5f275ef40ea1e0ca6 294 Pfam PF13690 Chemotaxis phosphatase CheX 42 139 1.9E-24 T 11-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain SYN_02656 da149878fd49f98820c3dd7361dbd3f3 455 Pfam PF00005 ABC transporter 89 220 9.1E-19 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_02656 da149878fd49f98820c3dd7361dbd3f3 455 SUPERFAMILY SSF52540 67 281 6.13E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02656 da149878fd49f98820c3dd7361dbd3f3 455 SMART SM00382 98 269 8.0E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_02656 da149878fd49f98820c3dd7361dbd3f3 455 Gene3D G3DSA:3.40.50.300 66 286 5.4E-42 T 11-10-2018 SYN_00449 00d1534002f20a20c8fc9e1834e01ec3 215 Gene3D G3DSA:1.10.530.10 62 213 9.4E-47 T 11-10-2018 SYN_00449 00d1534002f20a20c8fc9e1834e01ec3 215 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 108 136 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 SYN_00449 00d1534002f20a20c8fc9e1834e01ec3 215 SUPERFAMILY SSF53955 73 212 4.69E-48 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily SYN_00449 00d1534002f20a20c8fc9e1834e01ec3 215 Pfam PF01464 Transglycosylase SLT domain 91 198 1.3E-28 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 SYN_01495 42abd0a89ce6c260a627c7301ff2aef0 364 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 17 60 2.0E-8 T 11-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal SYN_01495 42abd0a89ce6c260a627c7301ff2aef0 364 Pfam PF09977 Putative Tad-like Flp pilus-assembly 76 174 1.0E-14 T 11-10-2018 IPR018705 Domain of unknown function DUF2134, membrane SYN_02383 05e9d951aa34dc4863ac150501f27eb9 907 Gene3D G3DSA:3.30.1490.20 366 508 1.0E-16 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 SYN_02383 05e9d951aa34dc4863ac150501f27eb9 907 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 333 705 3.1E-54 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 SYN_02383 05e9d951aa34dc4863ac150501f27eb9 907 SUPERFAMILY SSF56059 328 704 1.04E-35 T 11-10-2018 SYN_01920 8691d5d19f4dfdc381988c5ef6db3ad4 401 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 38 82 5.4E-8 T 11-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger SYN_01920 8691d5d19f4dfdc381988c5ef6db3ad4 401 Pfam PF01610 Transposase 153 388 5.4E-76 T 11-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SYN_00117 8691d5d19f4dfdc381988c5ef6db3ad4 401 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 38 82 5.4E-8 T 11-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger SYN_00117 8691d5d19f4dfdc381988c5ef6db3ad4 401 Pfam PF01610 Transposase 153 388 5.4E-76 T 11-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SYN_01218 6275d3ab77c768fdbba9cd2c00722f9c 388 SUPERFAMILY SSF103473 2 382 4.32E-49 T 11-10-2018 IPR036259 MFS transporter superfamily SYN_01218 6275d3ab77c768fdbba9cd2c00722f9c 388 Gene3D G3DSA:1.20.1250.20 204 384 8.1E-19 T 11-10-2018 SYN_01218 6275d3ab77c768fdbba9cd2c00722f9c 388 Pfam PF07690 Major Facilitator Superfamily 14 334 1.4E-28 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SYN_01218 6275d3ab77c768fdbba9cd2c00722f9c 388 Gene3D G3DSA:1.20.1250.20 1 187 4.4E-23 T 11-10-2018 SYN_01639 1c22277c399f9fa835198f65dfcb4ff9 519 Pfam PF00939 Sodium:sulfate symporter transmembrane region 43 517 2.0E-34 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 SYN_02773 3e2d31bad91f7174b43224f5c7e30db1 278 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 16 277 46.809 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 SYN_02773 3e2d31bad91f7174b43224f5c7e30db1 278 Pfam PF02548 Ketopantoate hydroxymethyltransferase 15 272 2.3E-122 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 SYN_02773 3e2d31bad91f7174b43224f5c7e30db1 278 SUPERFAMILY SSF51621 15 277 7.07E-114 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 SYN_02773 3e2d31bad91f7174b43224f5c7e30db1 278 Gene3D G3DSA:3.20.20.60 14 278 7.6E-123 T 11-10-2018 SYN_02773 3e2d31bad91f7174b43224f5c7e30db1 278 PIRSF PIRSF000388 6 278 1.2E-118 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 SYN_02773 3e2d31bad91f7174b43224f5c7e30db1 278 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 17 277 1.7E-115 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 SYN_00871 543112e96d8f75969b41d8b4b0b9d5e0 547 Pfam PF04087 Domain of unknown function (DUF389) 70 207 1.2E-35 T 11-10-2018 IPR005240 Protein of unknown function DUF389 SYN_00871 543112e96d8f75969b41d8b4b0b9d5e0 547 TIGRFAM TIGR00341 TIGR00341: TIGR00341 family protein 37 245 9.4E-32 T 11-10-2018 SYN_00504 fd5ffacecae61f6cd30f7d8790d60fc1 404 Gene3D G3DSA:3.30.870.10 3 166 5.8E-21 T 11-10-2018 SYN_00504 fd5ffacecae61f6cd30f7d8790d60fc1 404 SUPERFAMILY SSF56024 40 140 5.83E-9 T 11-10-2018 SYN_00504 fd5ffacecae61f6cd30f7d8790d60fc1 404 Pfam PF13091 PLD-like domain 23 139 1.3E-12 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 SYN_00428 0d67a86a4ebbd3095f23cb366be09169 442 Pfam PF07690 Major Facilitator Superfamily 33 399 4.1E-45 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SYN_00428 0d67a86a4ebbd3095f23cb366be09169 442 Gene3D G3DSA:1.20.1250.20 12 439 1.1E-62 T 11-10-2018 SYN_00428 0d67a86a4ebbd3095f23cb366be09169 442 SUPERFAMILY SSF103473 19 438 6.02E-68 T 11-10-2018 IPR036259 MFS transporter superfamily SYN_00958 223f6977eb19af6b28f34204d996bd1a 178 Gene3D G3DSA:2.40.10.220 67 170 2.9E-7 T 11-10-2018 SYN_00958 223f6977eb19af6b28f34204d996bd1a 178 Pfam PF07238 PilZ domain 85 166 1.1E-10 T 11-10-2018 IPR009875 PilZ domain GO:0035438 SYN_01399 ff40c36f1e98309ea4d6ef96117a5517 486 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 7 321 1.2E-98 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 SYN_01399 ff40c36f1e98309ea4d6ef96117a5517 486 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 23 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_01399 ff40c36f1e98309ea4d6ef96117a5517 486 Gene3D G3DSA:1.10.10.350 385 485 5.6E-23 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 SYN_01399 ff40c36f1e98309ea4d6ef96117a5517 486 SUPERFAMILY SSF52374 6 314 2.28E-112 T 11-10-2018 SYN_01399 ff40c36f1e98309ea4d6ef96117a5517 486 SUPERFAMILY SSF48163 315 479 1.12E-35 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 SYN_01399 ff40c36f1e98309ea4d6ef96117a5517 486 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 7 478 2.6E-153 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 SYN_01399 ff40c36f1e98309ea4d6ef96117a5517 486 Gene3D G3DSA:3.40.50.620 1 330 4.1E-140 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_01399 ff40c36f1e98309ea4d6ef96117a5517 486 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 5 479 32.092 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 SYN_01399 ff40c36f1e98309ea4d6ef96117a5517 486 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 218 2.6E-25 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 SYN_01399 ff40c36f1e98309ea4d6ef96117a5517 486 PRINTS PR00987 Glutamyl-tRNA synthetase signature 194 204 2.6E-25 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 SYN_01399 ff40c36f1e98309ea4d6ef96117a5517 486 PRINTS PR00987 Glutamyl-tRNA synthetase signature 9 21 2.6E-25 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 SYN_01399 ff40c36f1e98309ea4d6ef96117a5517 486 PRINTS PR00987 Glutamyl-tRNA synthetase signature 23 34 2.6E-25 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 SYN_01399 ff40c36f1e98309ea4d6ef96117a5517 486 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 51 2.6E-25 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 SYN_00541 e6b524201e75498754ded96cbb6f0ef6 257 Gene3D G3DSA:3.40.50.150 15 162 2.7E-27 T 11-10-2018 SYN_00541 e6b524201e75498754ded96cbb6f0ef6 257 Pfam PF08241 Methyltransferase domain 44 129 5.6E-18 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 SYN_00541 e6b524201e75498754ded96cbb6f0ef6 257 SUPERFAMILY SSF53335 30 201 1.52E-27 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_00866 8139f3165875b471d3d9939d130604bc 188 Pfam PF04366 Las17-binding protein actin regulator 101 184 3.3E-13 T 11-10-2018 IPR007461 Ysc84 actin-binding domain SYN_01550 fb339e4569106ea6918ce88e9b013cf3 409 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 408 4.0E-134 T 11-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 SYN_01550 fb339e4569106ea6918ce88e9b013cf3 409 Pfam PF00482 Type II secretion system (T2SS), protein F 278 400 1.6E-27 T 11-10-2018 IPR018076 Type II secretion system F domain SYN_01550 fb339e4569106ea6918ce88e9b013cf3 409 Pfam PF00482 Type II secretion system (T2SS), protein F 75 197 1.9E-34 T 11-10-2018 IPR018076 Type II secretion system F domain SYN_01550 fb339e4569106ea6918ce88e9b013cf3 409 Gene3D G3DSA:1.20.81.30 60 176 1.5E-32 T 11-10-2018 SYN_01550 fb339e4569106ea6918ce88e9b013cf3 409 Gene3D G3DSA:1.20.81.30 261 370 1.2E-30 T 11-10-2018 SYN_01550 fb339e4569106ea6918ce88e9b013cf3 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 70 82 1.9E-23 T 11-10-2018 IPR003004 GspF/PilC family SYN_01550 fb339e4569106ea6918ce88e9b013cf3 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 373 387 1.9E-23 T 11-10-2018 IPR003004 GspF/PilC family SYN_01550 fb339e4569106ea6918ce88e9b013cf3 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 169 197 1.9E-23 T 11-10-2018 IPR003004 GspF/PilC family SYN_01550 fb339e4569106ea6918ce88e9b013cf3 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 389 408 1.9E-23 T 11-10-2018 IPR003004 GspF/PilC family SYN_01550 fb339e4569106ea6918ce88e9b013cf3 409 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 169 197 - T 11-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 SYN_02943 61c267766106dfdb895b2a8b77a7acc7 363 Pfam PF01594 AI-2E family transporter 17 346 3.9E-40 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like SYN_02090 e34a96bda25ce61791cc762ffafb8254 189 Pfam PF00293 NUDIX domain 42 157 9.5E-14 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 SYN_02090 e34a96bda25ce61791cc762ffafb8254 189 SUPERFAMILY SSF55811 6 177 3.25E-41 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 SYN_02090 e34a96bda25ce61791cc762ffafb8254 189 Gene3D G3DSA:3.90.79.10 3 184 3.2E-45 T 11-10-2018 SYN_02005 6e124e16370c582c23d0b1174eddf95a 355 Gene3D G3DSA:3.30.70.270 186 353 3.1E-54 T 11-10-2018 SYN_02005 6e124e16370c582c23d0b1174eddf95a 355 Pfam PF00990 Diguanylate cyclase, GGDEF domain 193 349 5.2E-42 T 11-10-2018 IPR000160 GGDEF domain SYN_02005 6e124e16370c582c23d0b1174eddf95a 355 SMART SM00267 181 353 1.1E-52 T 11-10-2018 IPR000160 GGDEF domain SYN_02005 6e124e16370c582c23d0b1174eddf95a 355 SUPERFAMILY SSF55073 197 352 6.12E-48 T 11-10-2018 IPR029787 Nucleotide cyclase SYN_02005 6e124e16370c582c23d0b1174eddf95a 355 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 190 351 3.1E-49 T 11-10-2018 IPR000160 GGDEF domain SYN_00734 4b7d5c2d98f10b5b8fa6f836c6602f05 276 SUPERFAMILY SSF144020 15 276 5.89E-65 T 11-10-2018 IPR024064 FdhE-like superfamily SYN_00734 4b7d5c2d98f10b5b8fa6f836c6602f05 276 Gene3D G3DSA:3.90.1670.10 6 276 4.1E-45 T 11-10-2018 IPR024064 FdhE-like superfamily SYN_00734 4b7d5c2d98f10b5b8fa6f836c6602f05 276 Pfam PF04216 Protein involved in formate dehydrogenase formation 15 276 1.7E-32 T 11-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 SYN_00242 cccb006daec06ab2ceb36156202f2bac 309 Pfam PF00005 ABC transporter 25 168 3.1E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_00242 cccb006daec06ab2ceb36156202f2bac 309 SUPERFAMILY SSF52540 5 228 7.99E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00242 cccb006daec06ab2ceb36156202f2bac 309 Pfam PF13732 Domain of unknown function (DUF4162) 220 304 1.5E-7 T 11-10-2018 IPR025302 Domain of unknown function DUF4162 SYN_00242 cccb006daec06ab2ceb36156202f2bac 309 SMART SM00382 33 223 3.6E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_00242 cccb006daec06ab2ceb36156202f2bac 309 Gene3D G3DSA:3.40.50.300 1 243 9.5E-70 T 11-10-2018 SYN_01185 af45556d965b63e26f1407e50a47965b 297 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 45 290 8.0E-104 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 SYN_01185 af45556d965b63e26f1407e50a47965b 297 Hamap MF_02040 Iron-sulfur cluster carrier protein. 40 291 38.443 T 11-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein SYN_01185 af45556d965b63e26f1407e50a47965b 297 Gene3D G3DSA:3.40.50.300 31 289 2.9E-92 T 11-10-2018 SYN_01185 af45556d965b63e26f1407e50a47965b 297 ProSitePatterns PS01215 Mrp family signature. 153 169 - T 11-10-2018 IPR000808 Mrp, conserved site GO:0005524 SYN_01185 af45556d965b63e26f1407e50a47965b 297 SUPERFAMILY SSF52540 37 272 5.32E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00433 b4634549e729cb65f5ca97fd5bc70bb6 193 Gene3D G3DSA:2.40.50.180 71 137 3.1E-26 T 11-10-2018 SYN_00433 b4634549e729cb65f5ca97fd5bc70bb6 193 SUPERFAMILY SSF50341 51 185 4.71E-28 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 SYN_00433 b4634549e729cb65f5ca97fd5bc70bb6 193 SMART SM00260 48 182 3.5E-28 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 SYN_00433 b4634549e729cb65f5ca97fd5bc70bb6 193 Gene3D G3DSA:2.30.30.40 55 171 3.1E-26 T 11-10-2018 SYN_00433 b4634549e729cb65f5ca97fd5bc70bb6 193 Pfam PF01584 CheW-like domain 52 184 9.9E-27 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 SYN_00067 de425830cdb72fec36dc642161e83202 174 Pfam PF00466 Ribosomal protein L10 3 99 3.2E-26 T 11-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 SYN_00067 de425830cdb72fec36dc642161e83202 174 Gene3D G3DSA:3.30.70.1730 2 157 2.5E-37 T 11-10-2018 SYN_00067 de425830cdb72fec36dc642161e83202 174 SUPERFAMILY SSF160369 3 170 3.01E-48 T 11-10-2018 SYN_00067 de425830cdb72fec36dc642161e83202 174 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 159 23.672 T 11-10-2018 IPR022973 Ribosomal protein L10 SYN_01323 ca330f5f838fb91e87f6252566cb5ee2 101 Pfam PF07238 PilZ domain 22 87 2.4E-8 T 11-10-2018 IPR009875 PilZ domain GO:0035438 SYN_01323 ca330f5f838fb91e87f6252566cb5ee2 101 SUPERFAMILY SSF141371 30 87 3.92E-5 T 11-10-2018 SYN_02712 72c32fb6631575f7f2eab7f346907c8c 151 Pfam PF12092 Protein of unknown function (DUF3568) 28 147 4.2E-33 T 11-10-2018 IPR021952 Protein of unknown function DUF3568 SYN_01325 2cbc554c261c0f0c1dd6cec8493856d8 420 Pfam PF00872 Transposase, Mutator family 38 394 4.3E-95 T 11-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 SYN_00233 4d5e64b21aaf3281287c6994822a7d9a 134 Pfam PF00380 Ribosomal protein S9/S16 14 134 4.5E-46 T 11-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 SYN_00233 4d5e64b21aaf3281287c6994822a7d9a 134 ProSitePatterns PS00360 Ribosomal protein S9 signature. 73 91 - T 11-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 SYN_00233 4d5e64b21aaf3281287c6994822a7d9a 134 SUPERFAMILY SSF54211 10 134 3.79E-48 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SYN_00233 4d5e64b21aaf3281287c6994822a7d9a 134 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 5 134 31.968 T 11-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid SYN_00233 4d5e64b21aaf3281287c6994822a7d9a 134 Gene3D G3DSA:3.30.230.10 5 134 1.4E-52 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SYN_03450 506151ef776aaa0e8366bfd697a11c9a 58 Pfam PF06202 Amylo-alpha-1,6-glucosidase 29 57 1.5E-4 T 11-10-2018 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-6798695|Reactome: R-HSA-70221 SYN_01470 3cd003f91dfcf27cf24775109c2e256f 509 Pfam PF01514 Secretory protein of YscJ/FliF family 32 219 1.4E-73 T 11-10-2018 IPR006182 Secretory protein YscJ/FliF SYN_01470 3cd003f91dfcf27cf24775109c2e256f 509 Gene3D G3DSA:3.30.300.30 119 220 1.3E-9 T 11-10-2018 SYN_01470 3cd003f91dfcf27cf24775109c2e256f 509 Pfam PF08345 Flagellar M-ring protein C-terminal 253 395 7.6E-39 T 11-10-2018 IPR013556 Flagellar M-ring C-terminal SYN_01470 3cd003f91dfcf27cf24775109c2e256f 509 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 18 305 3.7E-83 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SYN_01470 3cd003f91dfcf27cf24775109c2e256f 509 PIRSF PIRSF004862 1 509 2.1E-141 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SYN_01470 3cd003f91dfcf27cf24775109c2e256f 509 PRINTS PR01009 Flagellar M-ring protein signature 120 138 1.0E-27 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SYN_01470 3cd003f91dfcf27cf24775109c2e256f 509 PRINTS PR01009 Flagellar M-ring protein signature 266 284 1.0E-27 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SYN_01470 3cd003f91dfcf27cf24775109c2e256f 509 PRINTS PR01009 Flagellar M-ring protein signature 152 166 1.0E-27 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SYN_01470 3cd003f91dfcf27cf24775109c2e256f 509 PRINTS PR01009 Flagellar M-ring protein signature 195 213 1.0E-27 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 SYN_02212 822ba15a0499539b75f8171a5d9fd990 128 PRINTS PR00340 P-II protein signature 67 90 7.1E-27 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SYN_02212 822ba15a0499539b75f8171a5d9fd990 128 PRINTS PR00340 P-II protein signature 17 32 7.1E-27 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SYN_02212 822ba15a0499539b75f8171a5d9fd990 128 PRINTS PR00340 P-II protein signature 38 56 7.1E-27 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SYN_02212 822ba15a0499539b75f8171a5d9fd990 128 PRINTS PR00340 P-II protein signature 98 118 7.1E-27 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SYN_02212 822ba15a0499539b75f8171a5d9fd990 128 Gene3D G3DSA:3.30.70.120 9 127 1.5E-40 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SYN_02212 822ba15a0499539b75f8171a5d9fd990 128 SUPERFAMILY SSF54913 16 127 7.31E-38 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta SYN_02212 822ba15a0499539b75f8171a5d9fd990 128 ProSitePatterns PS00638 P-II protein C-terminal region signature. 98 111 - T 11-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 SYN_02212 822ba15a0499539b75f8171a5d9fd990 128 SMART SM00938 19 120 2.8E-48 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SYN_02212 822ba15a0499539b75f8171a5d9fd990 128 Pfam PF00543 Nitrogen regulatory protein P-II 19 120 2.3E-35 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SYN_02961 018979bff2ba1aece733a35edb2e2b07 701 Gene3D G3DSA:3.40.50.12300 168 444 1.2E-50 T 11-10-2018 IPR038136 Gluconeogenesis factor superfamily SYN_02961 018979bff2ba1aece733a35edb2e2b07 701 SUPERFAMILY SSF142338 13 428 7.76E-53 T 11-10-2018 SYN_02961 018979bff2ba1aece733a35edb2e2b07 701 Pfam PF01933 Uncharacterised protein family UPF0052 15 404 6.4E-65 T 11-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 SYN_02961 018979bff2ba1aece733a35edb2e2b07 701 Gene3D G3DSA:3.40.50.12300 10 158 3.1E-20 T 11-10-2018 IPR038136 Gluconeogenesis factor superfamily SYN_00638 899f88ba0362ba7afcc528ad4759727d 190 Gene3D G3DSA:3.30.60.80 161 190 8.1E-19 T 11-10-2018 SYN_00638 899f88ba0362ba7afcc528ad4759727d 190 SUPERFAMILY SSF143555 9 149 2.49E-45 T 11-10-2018 SYN_00638 899f88ba0362ba7afcc528ad4759727d 190 Gene3D G3DSA:3.30.1330.130 1 160 2.8E-64 T 11-10-2018 SYN_00638 899f88ba0362ba7afcc528ad4759727d 190 Pfam PF02663 FmdE, Molybdenum formylmethanofuran dehydrogenase operon 21 145 3.3E-30 T 11-10-2018 IPR003814 Formylmethanofuran dehydrogenase, subunit E domain SYN_01697 602b1172b0c2cba47e5622b829c57ed1 196 Pfam PF07977 FabA-like domain 37 166 1.6E-40 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 SYN_01697 602b1172b0c2cba47e5622b829c57ed1 196 Gene3D G3DSA:3.10.129.10 4 177 1.9E-48 T 11-10-2018 SYN_01697 602b1172b0c2cba47e5622b829c57ed1 196 SUPERFAMILY SSF54637 8 175 1.58E-38 T 11-10-2018 IPR029069 HotDog domain superfamily SYN_00654 8034f1041b3b0be6231115876235f2cd 305 Pfam PF01515 Phosphate acetyl/butaryl transferase 78 275 1.8E-28 T 11-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 SYN_00654 8034f1041b3b0be6231115876235f2cd 305 Gene3D G3DSA:3.40.718.10 19 300 2.3E-65 T 11-10-2018 SYN_00654 8034f1041b3b0be6231115876235f2cd 305 PIRSF PIRSF000428 2 301 4.7E-46 T 11-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 SYN_00654 8034f1041b3b0be6231115876235f2cd 305 SUPERFAMILY SSF53659 34 298 9.46E-38 T 11-10-2018 SYN_02859 5334918eb5166a688f418302e3398473 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.2E-14 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SYN_02859 5334918eb5166a688f418302e3398473 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.2E-14 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SYN_02859 5334918eb5166a688f418302e3398473 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.2E-14 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SYN_02859 5334918eb5166a688f418302e3398473 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.1E-32 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SYN_02859 5334918eb5166a688f418302e3398473 90 SUPERFAMILY SSF47729 1 90 1.62E-30 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 SYN_02859 5334918eb5166a688f418302e3398473 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 SYN_02859 5334918eb5166a688f418302e3398473 90 SMART SM00411 1 90 4.0E-34 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 SYN_02859 5334918eb5166a688f418302e3398473 90 Gene3D G3DSA:4.10.520.10 1 90 6.1E-33 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 SYN_02418 7658d44072c06a9a65b5a2f68c6735b4 165 Gene3D G3DSA:3.10.180.10 10 155 1.0E-27 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SYN_02418 7658d44072c06a9a65b5a2f68c6735b4 165 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 26 125 6.3E-12 T 11-10-2018 SYN_02418 7658d44072c06a9a65b5a2f68c6735b4 165 SUPERFAMILY SSF54593 9 161 1.28E-21 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SYN_02764 33114b7602650c373f958f92ce76c067 159 Gene3D G3DSA:2.30.110.10 2 159 7.4E-36 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 SYN_02764 33114b7602650c373f958f92ce76c067 159 Pfam PF01613 Flavin reductase like domain 11 153 9.8E-30 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 SYN_02764 33114b7602650c373f958f92ce76c067 159 SUPERFAMILY SSF50475 3 152 6.38E-39 T 11-10-2018 SYN_02764 33114b7602650c373f958f92ce76c067 159 SMART SM00903 9 155 4.7E-35 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 SYN_00672 06f55790a373f5086bdb30d10d15f0c1 453 Pfam PF01554 MatE 23 177 7.7E-29 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 SYN_00672 06f55790a373f5086bdb30d10d15f0c1 453 Pfam PF01554 MatE 248 408 1.8E-18 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 SYN_00672 06f55790a373f5086bdb30d10d15f0c1 453 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 420 1.3E-56 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 SYN_00672 06f55790a373f5086bdb30d10d15f0c1 453 PIRSF PIRSF006603 1 450 1.7E-88 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 SYN_01035 c9296f3f9ddccfed69c3581cf9a464fb 400 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 23 400 2.0E-98 T 11-10-2018 SYN_01035 c9296f3f9ddccfed69c3581cf9a464fb 400 Pfam PF01960 ArgJ family 16 400 5.6E-138 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 SYN_01035 c9296f3f9ddccfed69c3581cf9a464fb 400 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 11 400 4.7E-130 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 SYN_01035 c9296f3f9ddccfed69c3581cf9a464fb 400 SUPERFAMILY SSF56266 11 396 3.14E-131 T 11-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 SYN_01035 c9296f3f9ddccfed69c3581cf9a464fb 400 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 400 135.373 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 SYN_01035 c9296f3f9ddccfed69c3581cf9a464fb 400 Gene3D G3DSA:3.10.20.340 273 400 6.8E-41 T 11-10-2018 SYN_01035 c9296f3f9ddccfed69c3581cf9a464fb 400 Gene3D G3DSA:3.60.70.12 4 272 3.1E-96 T 11-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 SYN_02536 ede7c46d51239ea0e15e9666049eee8b 629 Pfam PF00682 HMGL-like 59 334 1.2E-28 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 SYN_02536 ede7c46d51239ea0e15e9666049eee8b 629 SUPERFAMILY SSF51569 53 352 4.21E-57 T 11-10-2018 SYN_02536 ede7c46d51239ea0e15e9666049eee8b 629 Pfam PF02743 Cache domain 497 601 6.4E-13 T 11-10-2018 IPR033479 Double Cache domain 1 SYN_02536 ede7c46d51239ea0e15e9666049eee8b 629 SUPERFAMILY SSF103190 489 602 5.49E-19 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily SYN_02536 ede7c46d51239ea0e15e9666049eee8b 629 Gene3D G3DSA:3.30.450.20 490 595 2.2E-18 T 11-10-2018 SYN_02536 ede7c46d51239ea0e15e9666049eee8b 629 Gene3D G3DSA:3.20.20.70 50 382 1.1E-71 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_01336 d64a942dc451704f4034411b1129e5b2 809 TIGRFAM TIGR00595 priA: primosomal protein N' 292 806 7.9E-196 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 SYN_01336 d64a942dc451704f4034411b1129e5b2 809 Gene3D G3DSA:3.40.50.300 256 451 1.5E-70 T 11-10-2018 SYN_01336 d64a942dc451704f4034411b1129e5b2 809 SMART SM00487 264 464 4.3E-17 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain SYN_01336 d64a942dc451704f4034411b1129e5b2 809 Hamap MF_00983 Probable primosomal protein N' [priA]. 7 808 24.62 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 SYN_01336 d64a942dc451704f4034411b1129e5b2 809 Gene3D G3DSA:1.10.8.630 4 110 4.5E-27 T 11-10-2018 SYN_01336 d64a942dc451704f4034411b1129e5b2 809 SMART SM00490 568 665 4.7E-6 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_01336 d64a942dc451704f4034411b1129e5b2 809 Pfam PF00271 Helicase conserved C-terminal domain 567 664 4.6E-6 T 11-10-2018 IPR001650 Helicase, C-terminal SYN_01336 d64a942dc451704f4034411b1129e5b2 809 SUPERFAMILY SSF52540 264 445 6.23E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01336 d64a942dc451704f4034411b1129e5b2 809 SUPERFAMILY SSF52540 536 711 9.15E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01336 d64a942dc451704f4034411b1129e5b2 809 Pfam PF04851 Type III restriction enzyme, res subunit 266 432 3.4E-13 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SYN_01994 d8e4fbb34b4a79be3a357b2afb7fcbaf 244 Pfam PF00005 ABC transporter 37 185 2.8E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_01994 d8e4fbb34b4a79be3a357b2afb7fcbaf 244 SMART SM00382 46 234 4.4E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01994 d8e4fbb34b4a79be3a357b2afb7fcbaf 244 Gene3D G3DSA:3.40.50.300 15 243 9.6E-67 T 11-10-2018 SYN_01994 d8e4fbb34b4a79be3a357b2afb7fcbaf 244 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_01994 d8e4fbb34b4a79be3a357b2afb7fcbaf 244 SUPERFAMILY SSF52540 17 239 1.06E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00940 73c9828a6e722a25d5dbba5c3f6238a5 453 SUPERFAMILY SSF51261 262 435 3.35E-40 T 11-10-2018 IPR011055 Duplicated hybrid motif SYN_00940 73c9828a6e722a25d5dbba5c3f6238a5 453 Pfam PF01551 Peptidase family M23 338 432 5.4E-24 T 11-10-2018 IPR016047 Peptidase M23 SYN_00940 73c9828a6e722a25d5dbba5c3f6238a5 453 Gene3D G3DSA:2.70.70.10 280 438 8.4E-34 T 11-10-2018 IPR011055 Duplicated hybrid motif SYN_00115 ed5e47a5da4d5a02cc5521a458190ed2 400 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 26 398 9.3E-104 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 SYN_00115 ed5e47a5da4d5a02cc5521a458190ed2 400 PIRSF PIRSF015658 4 400 8.9E-69 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 SYN_01887 197f4864480a0c6098d850d0d7479c70 463 Pfam PF01966 HD domain 182 241 1.2E-4 T 11-10-2018 IPR006674 HD domain SYN_01887 197f4864480a0c6098d850d0d7479c70 463 SUPERFAMILY SSF109604 165 253 2.29E-5 T 11-10-2018 SYN_01591 d8b5d7c3244e6a06bc35437385c2401a 121 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 8 121 3.3E-38 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_01591 d8b5d7c3244e6a06bc35437385c2401a 121 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 5 121 26.735 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_01591 d8b5d7c3244e6a06bc35437385c2401a 121 Gene3D G3DSA:3.30.420.100 4 121 1.2E-39 T 11-10-2018 SYN_01591 d8b5d7c3244e6a06bc35437385c2401a 121 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 7 121 2.2E-42 T 11-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01591 d8b5d7c3244e6a06bc35437385c2401a 121 SUPERFAMILY SSF53137 8 119 3.27E-44 T 11-10-2018 SYN_00789 46b29d9f991b8073a8f831bc914ce07c 400 Pfam PF13458 Periplasmic binding protein 56 394 6.5E-64 T 11-10-2018 IPR028081 Leucine-binding protein domain SYN_00789 46b29d9f991b8073a8f831bc914ce07c 400 Gene3D G3DSA:3.40.50.2300 57 377 7.4E-103 T 11-10-2018 SYN_00789 46b29d9f991b8073a8f831bc914ce07c 400 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 56 72 6.8E-22 T 11-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SYN_00789 46b29d9f991b8073a8f831bc914ce07c 400 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 118 128 6.8E-22 T 11-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SYN_00789 46b29d9f991b8073a8f831bc914ce07c 400 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 97 115 6.8E-22 T 11-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SYN_00789 46b29d9f991b8073a8f831bc914ce07c 400 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 78 94 6.8E-22 T 11-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SYN_00789 46b29d9f991b8073a8f831bc914ce07c 400 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 286 304 6.8E-22 T 11-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SYN_00789 46b29d9f991b8073a8f831bc914ce07c 400 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 361 376 6.8E-22 T 11-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SYN_00789 46b29d9f991b8073a8f831bc914ce07c 400 Gene3D G3DSA:3.40.50.2300 175 304 7.4E-103 T 11-10-2018 SYN_00789 46b29d9f991b8073a8f831bc914ce07c 400 SUPERFAMILY SSF53822 55 399 3.85E-97 T 11-10-2018 IPR028082 Periplasmic binding protein-like I SYN_00127 7802d7462733d17aa623e3a4e4fe6b02 190 Pfam PF00072 Response regulator receiver domain 54 135 1.1E-4 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00127 7802d7462733d17aa623e3a4e4fe6b02 190 Gene3D G3DSA:3.40.50.2300 45 178 4.3E-5 T 11-10-2018 SYN_00127 7802d7462733d17aa623e3a4e4fe6b02 190 SUPERFAMILY SSF52172 52 117 3.53E-6 T 11-10-2018 IPR011006 CheY-like superfamily SYN_02978 4f595a10ecaf2581ba7ce493a039e3c5 261 TIGRFAM TIGR00282 TIGR00282: metallophosphoesterase, MG_246/BB_0505 family 1 258 6.1E-87 T 11-10-2018 IPR005235 Metallophosphoesterase, YmdB-like SYN_02978 4f595a10ecaf2581ba7ce493a039e3c5 261 Pfam PF13277 YmdB-like protein 4 254 1.3E-107 T 11-10-2018 IPR005235 Metallophosphoesterase, YmdB-like SYN_02978 4f595a10ecaf2581ba7ce493a039e3c5 261 PIRSF PIRSF004789 1 260 1.1E-96 T 11-10-2018 IPR005235 Metallophosphoesterase, YmdB-like SYN_02978 4f595a10ecaf2581ba7ce493a039e3c5 261 SUPERFAMILY SSF56300 1 256 1.96E-84 T 11-10-2018 SYN_02978 4f595a10ecaf2581ba7ce493a039e3c5 261 Gene3D G3DSA:3.60.21.10 1 261 1.7E-110 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like SYN_02683 785ba895131f431fbdc95796bc516a89 366 Gene3D G3DSA:3.40.50.2000 199 343 7.9E-49 T 11-10-2018 SYN_02683 785ba895131f431fbdc95796bc516a89 366 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 32 360 1.3E-100 T 11-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 SYN_02683 785ba895131f431fbdc95796bc516a89 366 SUPERFAMILY SSF53756 5 362 8.79E-106 T 11-10-2018 SYN_02683 785ba895131f431fbdc95796bc516a89 366 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 7 361 1.7E-92 T 11-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 SYN_02683 785ba895131f431fbdc95796bc516a89 366 Gene3D G3DSA:3.40.50.2000 4 198 8.8E-70 T 11-10-2018 SYN_00036 0cb2bb72681fe19c8df7128bdd8f1010 431 Pfam PF00534 Glycosyl transferases group 1 202 358 1.2E-31 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 SYN_00036 0cb2bb72681fe19c8df7128bdd8f1010 431 Gene3D G3DSA:3.40.50.2000 193 361 3.3E-41 T 11-10-2018 SYN_00036 0cb2bb72681fe19c8df7128bdd8f1010 431 Pfam PF13439 Glycosyltransferase Family 4 14 183 1.8E-33 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 SYN_00036 0cb2bb72681fe19c8df7128bdd8f1010 431 Gene3D G3DSA:3.40.50.2000 1 192 4.7E-41 T 11-10-2018 SYN_00036 0cb2bb72681fe19c8df7128bdd8f1010 431 SUPERFAMILY SSF53756 2 384 3.66E-81 T 11-10-2018 SYN_01848 5065afdda0e7589b384c3e59230f3ff3 1026 SUPERFAMILY SSF53335 582 723 1.97E-12 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_01848 5065afdda0e7589b384c3e59230f3ff3 1026 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 607 613 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SYN_01848 5065afdda0e7589b384c3e59230f3ff3 1026 Pfam PF06634 Protein of unknown function (DUF1156) 73 142 3.0E-21 T 11-10-2018 IPR009537 Domain of unknown function DUF1156 SYN_01848 5065afdda0e7589b384c3e59230f3ff3 1026 SUPERFAMILY SSF53335 181 227 8.15E-7 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_01102 d3e65e3bbe19ff21b47cbd495355e203 436 Pfam PF04932 O-Antigen ligase 215 354 7.0E-12 T 11-10-2018 IPR007016 O-antigen ligase-related SYN_00093 c033287c2a5adcced64c3ac5a7fc8bc6 355 Pfam PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain 184 289 2.4E-17 T 11-10-2018 IPR013791 RNA 3'-terminal phosphate cyclase, insert domain SYN_00093 c033287c2a5adcced64c3ac5a7fc8bc6 355 SUPERFAMILY SSF55205 1 183 5.89E-47 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 SYN_00093 c033287c2a5adcced64c3ac5a7fc8bc6 355 PIRSF PIRSF005378 1 350 1.1E-116 T 11-10-2018 IPR000228 RNA 3'-terminal phosphate cyclase GO:0006396 SYN_00093 c033287c2a5adcced64c3ac5a7fc8bc6 355 Gene3D G3DSA:3.65.10.20 4 338 5.5E-93 T 11-10-2018 IPR037136 RNA 3'-terminal phosphate cyclase domain superfamily SYN_00093 c033287c2a5adcced64c3ac5a7fc8bc6 355 SUPERFAMILY SSF52913 185 292 4.32E-5 T 11-10-2018 IPR036553 RNA 3'-terminal phosphate cyclase, insert domain superfamily SYN_00093 c033287c2a5adcced64c3ac5a7fc8bc6 355 TIGRFAM TIGR03399 RNA_3prim_cycl: RNA 3'-phosphate cyclase 2 338 6.5E-92 T 11-10-2018 IPR017770 RNA 3'-terminal phosphate cyclase type 1 GO:0003963|GO:0006396 SYN_00093 c033287c2a5adcced64c3ac5a7fc8bc6 355 Pfam PF01137 RNA 3'-terminal phosphate cyclase 9 340 8.7E-67 T 11-10-2018 IPR023797 RNA 3'-terminal phosphate cyclase domain SYN_00093 c033287c2a5adcced64c3ac5a7fc8bc6 355 Gene3D G3DSA:3.30.360.20 185 289 5.5E-93 T 11-10-2018 IPR036553 RNA 3'-terminal phosphate cyclase, insert domain superfamily SYN_00496 b3d4924b3bd99986aa8bf710c48fd1ad 715 SUPERFAMILY SSF52540 4 497 5.19E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00496 b3d4924b3bd99986aa8bf710c48fd1ad 715 Gene3D G3DSA:3.40.50.300 351 513 7.8E-9 T 11-10-2018 SYN_02221 1961dab21337ea6f4f36057efd167542 253 Gene3D G3DSA:3.40.50.700 6 166 2.2E-42 T 11-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily SYN_02221 1961dab21337ea6f4f36057efd167542 253 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 18 153 5.1E-27 T 11-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 SYN_02221 1961dab21337ea6f4f36057efd167542 253 SUPERFAMILY SSF56770 7 213 2.75E-43 T 11-10-2018 SYN_02059 8d4daee36bc665839642a0d6452149b4 300 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 19 0.0011 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SYN_02059 8d4daee36bc665839642a0d6452149b4 300 Pfam PF04015 Domain of unknown function (DUF362) 70 264 1.6E-45 T 11-10-2018 IPR007160 Domain of unknown function DUF362 SYN_02059 8d4daee36bc665839642a0d6452149b4 300 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 1 21 1.7E-5 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal SYN_03369 e032e41c666f3919d1229c53001a6ab5 170 Pfam PF07352 Bacteriophage Mu Gam like protein 22 164 1.8E-21 T 11-10-2018 IPR009951 Host-nuclease inhibitor protein Gam GO:0003690|GO:0042262 SYN_03369 e032e41c666f3919d1229c53001a6ab5 170 SUPERFAMILY SSF161266 20 166 9.68E-24 T 11-10-2018 SYN_02195 eae1f840de01dca2f1f05a01909dd76d 202 Gene3D G3DSA:3.90.870.10 1 202 7.0E-69 T 11-10-2018 SYN_02195 eae1f840de01dca2f1f05a01909dd76d 202 SUPERFAMILY SSF55821 3 201 1.46E-61 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily SYN_02195 eae1f840de01dca2f1f05a01909dd76d 202 Pfam PF01300 Telomere recombination 20 194 6.8E-53 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 SYN_02195 eae1f840de01dca2f1f05a01909dd76d 202 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 5 197 8.8E-67 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 SYN_02976 2faac56c992e8dba5eeb1e83ddd444c8 312 Pfam PF08388 Group II intron, maturase-specific domain 212 284 3.1E-11 T 11-10-2018 IPR013597 Group II intron, maturase-specific SYN_02976 2faac56c992e8dba5eeb1e83ddd444c8 312 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 84 155 1.1E-8 T 11-10-2018 IPR000477 Reverse transcriptase domain SYN_02976 2faac56c992e8dba5eeb1e83ddd444c8 312 SUPERFAMILY SSF56672 35 155 3.34E-15 T 11-10-2018 SYN_01684 71d8465a3f9127dda55aa06a6ff44233 259 Gene3D G3DSA:3.20.20.70 1 258 1.5E-98 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_01684 71d8465a3f9127dda55aa06a6ff44233 259 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.905 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 SYN_01684 71d8465a3f9127dda55aa06a6ff44233 259 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 3.8E-107 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 SYN_01684 71d8465a3f9127dda55aa06a6ff44233 259 Pfam PF00977 Histidine biosynthesis protein 5 240 2.7E-77 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 SYN_01684 71d8465a3f9127dda55aa06a6ff44233 259 SUPERFAMILY SSF51366 1 257 1.18E-74 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 SYN_02605 4f8d065e499cf201ca4efca626a99283 511 Gene3D G3DSA:2.160.20.10 41 340 1.3E-59 T 11-10-2018 IPR012334 Pectin lyase fold SYN_02605 4f8d065e499cf201ca4efca626a99283 511 SUPERFAMILY SSF51126 30 309 6.84E-43 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor SYN_01504 de76b18099a1c2fa5ce71985e0101432 200 Pfam PF07811 TadE-like protein 22 62 9.9E-12 T 11-10-2018 IPR012495 TadE-like SYN_01842 7c4e6bbd19fbb51adb71d789b815f027 198 SUPERFAMILY SSF88659 130 195 7.66E-8 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like SYN_03321 b6fae9c7a87079022ae96a513d0eb58d 113 Gene3D G3DSA:1.10.287.700 34 113 3.5E-6 T 11-10-2018 SYN_02600 ac5ae4ec53910375b500ed3f966327fc 129 SUPERFAMILY SSF53756 2 118 3.45E-26 T 11-10-2018 SYN_01309 bf35da6d63781d43f5e0888b12e794ef 266 Gene3D G3DSA:1.10.12.10 209 265 1.0E-14 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal SYN_01309 bf35da6d63781d43f5e0888b12e794ef 266 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 266 6.0E-67 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 SYN_01309 bf35da6d63781d43f5e0888b12e794ef 266 SUPERFAMILY SSF52096 7 265 4.05E-87 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily SYN_01309 bf35da6d63781d43f5e0888b12e794ef 266 Gene3D G3DSA:3.90.226.10 4 208 1.9E-71 T 11-10-2018 SYN_02564 f5c0041da4de27389ca93ea1b62a1e52 122 SUPERFAMILY SSF47336 2 60 2.75E-9 T 11-10-2018 IPR036736 ACP-like superfamily SYN_02564 f5c0041da4de27389ca93ea1b62a1e52 122 Gene3D G3DSA:1.10.1200.10 2 81 8.7E-13 T 11-10-2018 IPR036736 ACP-like superfamily SYN_02564 f5c0041da4de27389ca93ea1b62a1e52 122 Pfam PF00550 Phosphopantetheine attachment site 6 60 1.5E-6 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain SYN_03005 9a25ca8e4c58ffb8a8114bc47605ae50 255 Pfam PF03458 UPF0126 domain 125 195 1.9E-19 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 SYN_03005 9a25ca8e4c58ffb8a8114bc47605ae50 255 Pfam PF03458 UPF0126 domain 38 112 2.0E-22 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 SYN_00147 cefc2fc9986c8b950255b17e23782d48 351 Gene3D G3DSA:1.10.1130.10 125 235 7.7E-6 T 11-10-2018 SYN_00147 cefc2fc9986c8b950255b17e23782d48 351 SUPERFAMILY SSF48695 12 331 2.54E-28 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily SYN_00147 cefc2fc9986c8b950255b17e23782d48 351 Pfam PF14537 Cytochrome c3 166 246 1.0E-5 T 11-10-2018 IPR012286 Tetrahaem cytochrome domain KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 SYN_00668 d5c993d8fb516099b2e1ec8a62aab96a 246 Gene3D G3DSA:2.40.160.20 101 241 2.2E-14 T 11-10-2018 SYN_00668 d5c993d8fb516099b2e1ec8a62aab96a 246 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 124 243 3.0E-18 T 11-10-2018 IPR018550 Lipid A 3-O-deacylase-related SYN_00668 d5c993d8fb516099b2e1ec8a62aab96a 246 SUPERFAMILY SSF56925 132 246 8.63E-14 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel SYN_03526 54a764dc5c9239d9067b82ea4e1b85cc 91 SUPERFAMILY SSF143011 1 88 7.06E-7 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily SYN_02133 eba45d548e676118e223b6b7486b5373 464 SMART SM00729 76 300 8.8E-4 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 SYN_02133 eba45d548e676118e223b6b7486b5373 464 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 266 372 1.7E-24 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 SYN_02133 eba45d548e676118e223b6b7486b5373 464 SMART SM00876 266 375 1.9E-31 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 SYN_02133 eba45d548e676118e223b6b7486b5373 464 SUPERFAMILY SSF102114 37 341 2.49E-49 T 11-10-2018 SYN_02133 eba45d548e676118e223b6b7486b5373 464 Gene3D G3DSA:3.20.20.70 7 386 3.6E-117 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_02133 eba45d548e676118e223b6b7486b5373 464 TIGRFAM TIGR03955 rSAM_HydG: [FeFe] hydrogenase H-cluster radical SAM maturase HydG 2 462 3.6E-166 T 11-10-2018 IPR024007 [FeFe]-hydrogenase maturation HydG, radical SAM SYN_02133 eba45d548e676118e223b6b7486b5373 464 Pfam PF04055 Radical SAM superfamily 82 231 3.7E-10 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 SYN_01862 888747b3546305a09a6c566220c187b1 284 Pfam PF06586 TraK protein 16 271 2.6E-59 T 11-10-2018 IPR010563 Pilus assembly TraK SYN_01208 2dfcbc935f0c2128851d8d7c840807dc 432 SMART SM01091 349 431 1.1E-28 T 11-10-2018 IPR005170 Transporter-associated domain SYN_01208 2dfcbc935f0c2128851d8d7c840807dc 432 Gene3D G3DSA:3.30.465.10 348 430 2.3E-30 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 SYN_01208 2dfcbc935f0c2128851d8d7c840807dc 432 Pfam PF00571 CBS domain 283 333 1.8E-8 T 11-10-2018 IPR000644 CBS domain SYN_01208 2dfcbc935f0c2128851d8d7c840807dc 432 Pfam PF00571 CBS domain 220 274 0.0045 T 11-10-2018 IPR000644 CBS domain SYN_01208 2dfcbc935f0c2128851d8d7c840807dc 432 SUPERFAMILY SSF56176 347 431 6.82E-22 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 SYN_01208 2dfcbc935f0c2128851d8d7c840807dc 432 SUPERFAMILY SSF54631 204 338 4.15E-28 T 11-10-2018 SYN_01208 2dfcbc935f0c2128851d8d7c840807dc 432 Pfam PF03471 Transporter associated domain 350 430 3.9E-20 T 11-10-2018 IPR005170 Transporter-associated domain SYN_01208 2dfcbc935f0c2128851d8d7c840807dc 432 Pfam PF01595 Domain of unknown function DUF21 10 199 3.3E-46 T 11-10-2018 IPR002550 CNNM, transmembrane domain SYN_01208 2dfcbc935f0c2128851d8d7c840807dc 432 SMART SM00116 287 335 0.31 T 11-10-2018 IPR000644 CBS domain SYN_01208 2dfcbc935f0c2128851d8d7c840807dc 432 SMART SM00116 225 274 3.2 T 11-10-2018 IPR000644 CBS domain SYN_01208 2dfcbc935f0c2128851d8d7c840807dc 432 Gene3D G3DSA:3.10.580.10 197 347 6.1E-40 T 11-10-2018 SYN_00128 88641781d430b68689510250485ccc59 396 Pfam PF00852 Glycosyltransferase family 10 (fucosyltransferase) C-term 174 289 7.5E-9 T 11-10-2018 IPR001503 Glycosyl transferase family 10 GO:0006486|GO:0008417|GO:0016020 SYN_00128 88641781d430b68689510250485ccc59 396 Gene3D G3DSA:3.40.50.11660 154 318 1.7E-20 T 11-10-2018 IPR038577 GT10-like superfamily SYN_00128 88641781d430b68689510250485ccc59 396 SUPERFAMILY SSF53756 27 325 5.96E-49 T 11-10-2018 SYN_02901 cf6050c7ea99188a03f5233974a33ffc 285 Gene3D G3DSA:3.30.70.20 171 269 2.4E-7 T 11-10-2018 SYN_02901 cf6050c7ea99188a03f5233974a33ffc 285 SUPERFAMILY SSF54862 174 236 9.84E-9 T 11-10-2018 SYN_02503 60527560ab31102b48540bb136916339 264 Gene3D G3DSA:2.40.160.20 66 264 3.4E-21 T 11-10-2018 SYN_02503 60527560ab31102b48540bb136916339 264 Pfam PF13505 Outer membrane protein beta-barrel domain 49 264 2.8E-17 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel SYN_02503 60527560ab31102b48540bb136916339 264 SUPERFAMILY SSF56925 64 264 4.45E-25 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel SYN_02977 6244e98ae1d1b2224e62ae7e91807cb7 428 Gene3D G3DSA:1.10.240.10 227 325 2.3E-30 T 11-10-2018 SYN_02977 6244e98ae1d1b2224e62ae7e91807cb7 428 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 6 427 6.3E-119 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 SYN_02977 6244e98ae1d1b2224e62ae7e91807cb7 428 Gene3D G3DSA:3.40.50.620 2 226 1.7E-84 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_02977 6244e98ae1d1b2224e62ae7e91807cb7 428 Pfam PF00579 tRNA synthetases class I (W and Y) 30 317 2.9E-82 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_02977 6244e98ae1d1b2224e62ae7e91807cb7 428 Gene3D G3DSA:3.10.290.10 334 428 3.3E-17 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 SYN_02977 6244e98ae1d1b2224e62ae7e91807cb7 428 SUPERFAMILY SSF55174 354 427 4.32E-11 T 11-10-2018 SYN_02977 6244e98ae1d1b2224e62ae7e91807cb7 428 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 427 42.347 T 11-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 SYN_02977 6244e98ae1d1b2224e62ae7e91807cb7 428 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 2.1E-24 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 SYN_02977 6244e98ae1d1b2224e62ae7e91807cb7 428 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 182 204 2.1E-24 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 SYN_02977 6244e98ae1d1b2224e62ae7e91807cb7 428 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 215 227 2.1E-24 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 SYN_02977 6244e98ae1d1b2224e62ae7e91807cb7 428 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 45 67 2.1E-24 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 SYN_02977 6244e98ae1d1b2224e62ae7e91807cb7 428 SUPERFAMILY SSF52374 5 318 4.5E-95 T 11-10-2018 SYN_01840 e3797da4aedec29a7e620eaa55f22ad0 310 SUPERFAMILY SSF52833 149 296 5.97E-12 T 11-10-2018 IPR036249 Thioredoxin-like superfamily SYN_01840 e3797da4aedec29a7e620eaa55f22ad0 310 Gene3D G3DSA:3.40.30.10 144 306 2.6E-8 T 11-10-2018 SYN_01840 e3797da4aedec29a7e620eaa55f22ad0 310 Pfam PF13462 Thioredoxin 155 286 5.0E-5 T 11-10-2018 IPR012336 Thioredoxin-like fold SYN_00162 c7a7b3b9042e7a11d2fb52958ee0880c 104 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 4 103 6.0E-28 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family SYN_00162 c7a7b3b9042e7a11d2fb52958ee0880c 104 Pfam PF02575 YbaB/EbfC DNA-binding family 9 99 1.2E-34 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family SYN_00162 c7a7b3b9042e7a11d2fb52958ee0880c 104 PIRSF PIRSF004555 2 104 1.9E-37 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family SYN_00162 c7a7b3b9042e7a11d2fb52958ee0880c 104 Gene3D G3DSA:3.30.1310.10 2 104 1.1E-37 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily SYN_00162 c7a7b3b9042e7a11d2fb52958ee0880c 104 SUPERFAMILY SSF82607 9 103 1.26E-32 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily SYN_00162 c7a7b3b9042e7a11d2fb52958ee0880c 104 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 3 97 22.202 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family SYN_00694 6a3247f77928715113a08ebcbad9b5f4 83 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 62 73 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_00694 6a3247f77928715113a08ebcbad9b5f4 83 SUPERFAMILY SSF54862 13 81 3.81E-21 T 11-10-2018 SYN_00694 6a3247f77928715113a08ebcbad9b5f4 83 Gene3D G3DSA:3.30.70.20 55 83 4.4E-7 T 11-10-2018 SYN_00694 6a3247f77928715113a08ebcbad9b5f4 83 Gene3D G3DSA:3.30.70.20 9 54 2.9E-6 T 11-10-2018 SYN_00694 6a3247f77928715113a08ebcbad9b5f4 83 Pfam PF00037 4Fe-4S binding domain 29 52 1.2E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_00694 6a3247f77928715113a08ebcbad9b5f4 83 Pfam PF00037 4Fe-4S binding domain 55 78 2.3E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_00694 6a3247f77928715113a08ebcbad9b5f4 83 TIGRFAM TIGR02179 PorD_KorD: 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family 11 82 1.8E-29 T 11-10-2018 IPR011898 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate GO:0016625|GO:0051539 SYN_01087 cd210e37d898475a63d582a348f983e9 231 Pfam PF13230 Glutamine amidotransferases class-II 1 188 1.7E-14 T 11-10-2018 IPR026869 Putative glutamine amidotransferase type 2 SYN_01087 cd210e37d898475a63d582a348f983e9 231 Gene3D G3DSA:3.60.20.10 1 231 2.9E-30 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal SYN_01087 cd210e37d898475a63d582a348f983e9 231 SUPERFAMILY SSF56235 2 214 1.12E-23 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal SYN_01135 b17aac1b817fba19edc3d11a4e66c047 232 SUPERFAMILY SSF52540 1 221 7.81E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01135 b17aac1b817fba19edc3d11a4e66c047 232 Gene3D G3DSA:3.40.50.300 3 231 3.4E-10 T 11-10-2018 SYN_01135 b17aac1b817fba19edc3d11a4e66c047 232 Pfam PF13238 AAA domain 8 176 3.4E-30 T 11-10-2018 SYN_00842 9139b4c5a5e0f50741eff5e29fce9870 276 SUPERFAMILY SSF53633 46 274 3.4E-31 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily SYN_00842 9139b4c5a5e0f50741eff5e29fce9870 276 PIRSF PIRSF039097 5 276 2.8E-131 T 11-10-2018 IPR030669 Molybdenum storage protein subunit alpha/beta GO:0005737|GO:0030151 SYN_00842 9139b4c5a5e0f50741eff5e29fce9870 276 Gene3D G3DSA:3.40.1160.10 10 274 2.2E-62 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily SYN_00842 9139b4c5a5e0f50741eff5e29fce9870 276 Pfam PF00696 Amino acid kinase family 46 224 1.4E-22 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 SYN_00991 3a710f66818a7c0dd80a0cf92357c897 216 SMART SM00322 59 124 2.9E-6 T 11-10-2018 IPR004087 K Homology domain GO:0003676 SYN_00991 3a710f66818a7c0dd80a0cf92357c897 216 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 11-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00991 3a710f66818a7c0dd80a0cf92357c897 216 SUPERFAMILY SSF54821 107 205 3.53E-37 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00991 3a710f66818a7c0dd80a0cf92357c897 216 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 2.2E-36 T 11-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00991 3a710f66818a7c0dd80a0cf92357c897 216 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 1.1E-90 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 SYN_00991 3a710f66818a7c0dd80a0cf92357c897 216 Pfam PF07650 KH domain 37 109 1.8E-17 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00991 3a710f66818a7c0dd80a0cf92357c897 216 SUPERFAMILY SSF54814 2 105 2.38E-39 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 SYN_00991 3a710f66818a7c0dd80a0cf92357c897 216 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 37.263 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 SYN_00991 3a710f66818a7c0dd80a0cf92357c897 216 Gene3D G3DSA:3.30.300.20 17 106 2.9E-29 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta SYN_00991 3a710f66818a7c0dd80a0cf92357c897 216 Gene3D G3DSA:3.30.1140.32 107 207 3.2E-39 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00156 a0dac6c6562e70569422a03524baf5ba 113 TIGRFAM TIGR02179 PorD_KorD: 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family 38 113 5.0E-30 T 11-10-2018 IPR011898 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate GO:0016625|GO:0051539 SYN_00156 a0dac6c6562e70569422a03524baf5ba 113 Gene3D G3DSA:3.30.70.20 34 75 2.2E-5 T 11-10-2018 SYN_00156 a0dac6c6562e70569422a03524baf5ba 113 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 62 73 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_00156 a0dac6c6562e70569422a03524baf5ba 113 Pfam PF14697 4Fe-4S dicluster domain 58 109 2.6E-9 T 11-10-2018 SYN_00156 a0dac6c6562e70569422a03524baf5ba 113 Gene3D G3DSA:3.30.70.20 76 113 2.9E-6 T 11-10-2018 SYN_00156 a0dac6c6562e70569422a03524baf5ba 113 SUPERFAMILY SSF54862 45 112 1.53E-17 T 11-10-2018 SYN_00565 22939f169fced06871769dbb37513926 417 SUPERFAMILY SSF53383 56 417 1.31E-85 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SYN_00565 22939f169fced06871769dbb37513926 417 Gene3D G3DSA:3.40.640.10 85 321 8.0E-108 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SYN_00565 22939f169fced06871769dbb37513926 417 Gene3D G3DSA:3.90.1150.10 70 414 8.0E-108 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SYN_00565 22939f169fced06871769dbb37513926 417 Pfam PF00155 Aminotransferase class I and II 70 416 7.5E-42 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SYN_01499 5b4d9d788e4ce1b044be3f63ef5da0c8 317 Pfam PF00482 Type II secretion system (T2SS), protein F 175 303 1.2E-22 T 11-10-2018 IPR018076 Type II secretion system F domain SYN_00482 6ee116787cbdc796ab36da687e756683 199 Pfam PF12804 MobA-like NTP transferase domain 3 144 1.9E-34 T 11-10-2018 IPR025877 MobA-like NTP transferase SYN_00482 6ee116787cbdc796ab36da687e756683 199 Gene3D G3DSA:3.90.550.10 4 197 4.4E-50 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_00482 6ee116787cbdc796ab36da687e756683 199 SUPERFAMILY SSF53448 1 184 5.18E-33 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_00482 6ee116787cbdc796ab36da687e756683 199 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 1 187 21.146 T 11-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 SYN_01732 f3e230c59b08ea3f4f47876fa590038d 247 SUPERFAMILY SSF117396 9 242 1.57E-82 T 11-10-2018 IPR036520 UPF0759 superfamily SYN_01732 f3e230c59b08ea3f4f47876fa590038d 247 Gene3D G3DSA:3.20.20.410 3 244 1.2E-79 T 11-10-2018 IPR036520 UPF0759 superfamily SYN_01732 f3e230c59b08ea3f4f47876fa590038d 247 Pfam PF01904 Protein of unknown function DUF72 27 241 2.6E-68 T 11-10-2018 IPR002763 Protein of unknown function DUF72 SYN_01598 44473ad2f76c1692cbba2035aa4937b7 122 SUPERFAMILY SSF46946 2 121 1.77E-46 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 SYN_01598 44473ad2f76c1692cbba2035aa4937b7 122 Pfam PF00416 Ribosomal protein S13/S18 3 109 1.6E-33 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_01598 44473ad2f76c1692cbba2035aa4937b7 122 Gene3D G3DSA:1.10.8.50 1 72 9.8E-30 T 11-10-2018 SYN_01598 44473ad2f76c1692cbba2035aa4937b7 122 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 11-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_01598 44473ad2f76c1692cbba2035aa4937b7 122 PIRSF PIRSF002134 1 122 9.5E-44 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_01598 44473ad2f76c1692cbba2035aa4937b7 122 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 5.1E-55 T 11-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_01598 44473ad2f76c1692cbba2035aa4937b7 122 Gene3D G3DSA:4.10.910.10 73 122 4.9E-25 T 11-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_01598 44473ad2f76c1692cbba2035aa4937b7 122 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 27.571 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_01964 a782b834ad67df6a1e431d7fc7d91aa5 119 Pfam PF04359 Protein of unknown function (DUF493) 41 119 2.1E-20 T 11-10-2018 IPR007454 Uncharacterised protein family UPF0250 SYN_01964 a782b834ad67df6a1e431d7fc7d91aa5 119 Gene3D G3DSA:3.30.70.260 38 119 1.2E-15 T 11-10-2018 SYN_01964 a782b834ad67df6a1e431d7fc7d91aa5 119 SUPERFAMILY SSF117991 39 119 6.8E-25 T 11-10-2018 IPR027471 YbeD-like domain superfamily SYN_01964 a782b834ad67df6a1e431d7fc7d91aa5 119 ProDom PD061650 JHP0447 HP0495 CJ0253 43 109 1.0E-11 T 11-10-2018 SYN_02794 585df627c28d00da5f4bf548ccc5e948 334 Pfam PF02562 PhoH-like protein 116 319 2.2E-93 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 SYN_02794 585df627c28d00da5f4bf548ccc5e948 334 SUPERFAMILY SSF52540 56 293 6.0E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02794 585df627c28d00da5f4bf548ccc5e948 334 Gene3D G3DSA:3.40.50.300 112 319 8.5E-73 T 11-10-2018 SYN_03116 6f487422e6156e021cf390cf8e84afe6 433 SUPERFAMILY SSF56935 21 423 1.19E-11 T 11-10-2018 SYN_00927 99da4d2d519ecb706f5f25fc3a5a1651 300 SUPERFAMILY SSF47413 9 80 6.22E-8 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 SYN_00927 99da4d2d519ecb706f5f25fc3a5a1651 300 Gene3D G3DSA:1.10.260.40 2 109 5.5E-30 T 11-10-2018 SYN_00927 99da4d2d519ecb706f5f25fc3a5a1651 300 Pfam PF13464 Domain of unknown function (DUF4115) 228 299 1.7E-15 T 11-10-2018 IPR025194 Domain of unknown function DUF4115 SYN_00927 99da4d2d519ecb706f5f25fc3a5a1651 300 Pfam PF13413 Helix-turn-helix domain 17 77 7.2E-23 T 11-10-2018 SYN_00898 5ef5a648dc37fbf8c46157c6ad543b34 159 Pfam PF06938 Protein of unknown function (DUF1285) 14 148 7.1E-31 T 11-10-2018 IPR010707 Protein of unknown function DUF1285 SYN_00898 5ef5a648dc37fbf8c46157c6ad543b34 159 Gene3D G3DSA:3.10.540.10 5 65 8.8E-10 T 11-10-2018 SYN_03279 353a81181c1dbd477e3d8527e36f1d85 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 286 6.5E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 SYN_03279 353a81181c1dbd477e3d8527e36f1d85 293 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 7 285 8.8E-58 T 11-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 SYN_03279 353a81181c1dbd477e3d8527e36f1d85 293 SUPERFAMILY SSF161098 10 279 7.33E-30 T 11-10-2018 IPR035906 MetI-like superfamily SYN_03279 353a81181c1dbd477e3d8527e36f1d85 293 Gene3D G3DSA:1.10.3720.10 57 286 5.2E-31 T 11-10-2018 IPR035906 MetI-like superfamily SYN_00501 607089dd7063c22c67b20c0138dd3d05 272 Gene3D G3DSA:3.60.15.10 2 233 2.5E-24 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_00501 607089dd7063c22c67b20c0138dd3d05 272 SUPERFAMILY SSF56281 3 255 1.0E-15 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_00843 27e07c20f952a5658aa760d8197d690b 109 SUPERFAMILY SSF47413 37 101 7.31E-13 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 SYN_00843 27e07c20f952a5658aa760d8197d690b 109 Gene3D G3DSA:1.10.260.40 11 108 7.6E-16 T 11-10-2018 SYN_02251 86f22a790433c20d43eb5a7bc3431e03 902 TIGRFAM TIGR02577 cas_TM1794_Cmr2: CRISPR-associated protein Cas10/Cmr2, subtype III-B 211 769 7.1E-77 T 11-10-2018 IPR013407 CRISPR-associated protein Cmr2 SYN_02251 86f22a790433c20d43eb5a7bc3431e03 902 Pfam PF12469 CRISPR-associated protein 211 331 2.7E-32 T 11-10-2018 IPR024615 CRISPR-associated protein Cmr2, N-terminal SYN_02433 09bfc5599465d1d1f564bb633803edfc 260 ProDom PD032436 LIPOPROTEIN UNCHARACTERIZED PROBABLE CJ0457C SIMILAR TRANSFERASE BACTERIA PRECURSOR SIGNAL CC0304 54 177 3.0E-8 T 11-10-2018 IPR007172 Domain of unknown function DUF374 SYN_02433 09bfc5599465d1d1f564bb633803edfc 260 Pfam PF04028 Domain of unknown function (DUF374) 118 178 3.6E-21 T 11-10-2018 IPR007172 Domain of unknown function DUF374 SYN_02433 09bfc5599465d1d1f564bb633803edfc 260 SUPERFAMILY SSF69593 135 254 1.57E-6 T 11-10-2018 SYN_03142 b31b93694999a437eb11f3f2472085a7 522 Gene3D G3DSA:3.30.830.10 46 133 1.3E-20 T 11-10-2018 SYN_03142 b31b93694999a437eb11f3f2472085a7 522 Pfam PF05193 Peptidase M16 inactive domain 272 450 5.5E-30 T 11-10-2018 IPR007863 Peptidase M16, C-terminal SYN_03142 b31b93694999a437eb11f3f2472085a7 522 Pfam PF00675 Insulinase (Peptidase family M16) 65 116 2.2E-8 T 11-10-2018 IPR011765 Peptidase M16, N-terminal SYN_03142 b31b93694999a437eb11f3f2472085a7 522 Pfam PF00675 Insulinase (Peptidase family M16) 156 264 1.1E-7 T 11-10-2018 IPR011765 Peptidase M16, N-terminal SYN_03142 b31b93694999a437eb11f3f2472085a7 522 SUPERFAMILY SSF63411 53 320 8.46E-46 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SYN_03142 b31b93694999a437eb11f3f2472085a7 522 Gene3D G3DSA:3.30.830.10 140 323 5.2E-36 T 11-10-2018 SYN_03142 b31b93694999a437eb11f3f2472085a7 522 SUPERFAMILY SSF63411 345 518 8.77E-36 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SYN_03142 b31b93694999a437eb11f3f2472085a7 522 Gene3D G3DSA:3.30.830.10 327 519 2.3E-49 T 11-10-2018 SYN_03142 b31b93694999a437eb11f3f2472085a7 522 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 85 108 - T 11-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 SYN_01521 4ee4f465d3184a15194ad8b6ce79b12d 293 Gene3D G3DSA:3.40.1190.20 1 275 1.1E-103 T 11-10-2018 IPR029056 Ribokinase-like SYN_01521 4ee4f465d3184a15194ad8b6ce79b12d 293 SUPERFAMILY SSF53613 6 263 2.03E-82 T 11-10-2018 IPR029056 Ribokinase-like SYN_01521 4ee4f465d3184a15194ad8b6ce79b12d 293 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 8 259 7.9E-104 T 11-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SYN_01521 4ee4f465d3184a15194ad8b6ce79b12d 293 Pfam PF08543 Phosphomethylpyrimidine kinase 15 258 7.8E-96 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 SYN_01863 3d36fe4eb8c6476ba13c1295c2042ad9 397 Pfam PF03743 Bacterial conjugation TrbI-like protein 187 385 1.8E-29 T 11-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI SYN_02385 515f04d636b3c82e82de3f5acc06fca3 558 Gene3D G3DSA:3.20.20.70 123 554 4.5E-27 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_02385 515f04d636b3c82e82de3f5acc06fca3 558 SUPERFAMILY SSF51395 123 513 1.33E-41 T 11-10-2018 SYN_02385 515f04d636b3c82e82de3f5acc06fca3 558 Pfam PF01645 Conserved region in glutamate synthase 304 430 6.7E-12 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 SYN_01875 dc91f1b2cea260fa711a3cfbab38b327 1012 Pfam PF07916 TraG-like protein, N-terminal region 30 489 1.2E-88 T 11-10-2018 IPR012931 TraG-like, N-terminal SYN_01359 040c3baf52b4a8f0af96a41e1e5cf4ab 128 Gene3D G3DSA:2.60.120.10 14 125 8.8E-18 T 11-10-2018 IPR014710 RmlC-like jelly roll fold SYN_01359 040c3baf52b4a8f0af96a41e1e5cf4ab 128 SUPERFAMILY SSF51182 16 127 1.8E-31 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily SYN_01359 040c3baf52b4a8f0af96a41e1e5cf4ab 128 Pfam PF01050 Mannose-6-phosphate isomerase 17 123 1.7E-34 T 11-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 SYN_02253 849479bf8493c9348c94fcc7521f021f 377 TIGRFAM TIGR02584 cas_NE0113: CRISPR-associated protein, NE0113 family 4 208 9.2E-57 T 11-10-2018 IPR013413 CRISPR-associated protein, NE0113 SYN_02253 849479bf8493c9348c94fcc7521f021f 377 Pfam PF09623 CRISPR-associated protein NE0113 (Cas_NE0113) 12 229 3.8E-75 T 11-10-2018 IPR019092 CRISPR-assoc protein, NE0113/Csx13 SYN_02404 6dd1815f7b2483e224f07925ab40e909 1325 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 970 1324 1.6E-56 T 11-10-2018 IPR007452 Translocation and assembly module TamB SYN_01946 f6606e4e4b557287456e0a94808d13c2 208 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 186 3.9E-80 T 11-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 SYN_01946 f6606e4e4b557287456e0a94808d13c2 208 Gene3D G3DSA:3.40.50.880 1 190 1.9E-64 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like SYN_01946 f6606e4e4b557287456e0a94808d13c2 208 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.4E-34 T 11-10-2018 SYN_01946 f6606e4e4b557287456e0a94808d13c2 208 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.4E-34 T 11-10-2018 SYN_01946 f6606e4e4b557287456e0a94808d13c2 208 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.4E-34 T 11-10-2018 SYN_01946 f6606e4e4b557287456e0a94808d13c2 208 PRINTS PR00097 Anthranilate synthase component II signature 164 177 1.4E-34 T 11-10-2018 SYN_01946 f6606e4e4b557287456e0a94808d13c2 208 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.4E-34 T 11-10-2018 SYN_01946 f6606e4e4b557287456e0a94808d13c2 208 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.4E-34 T 11-10-2018 SYN_01946 f6606e4e4b557287456e0a94808d13c2 208 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 2.0E-13 T 11-10-2018 SYN_01946 f6606e4e4b557287456e0a94808d13c2 208 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 2.0E-13 T 11-10-2018 SYN_01946 f6606e4e4b557287456e0a94808d13c2 208 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 2.0E-13 T 11-10-2018 SYN_01946 f6606e4e4b557287456e0a94808d13c2 208 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 2.4E-6 T 11-10-2018 SYN_01946 f6606e4e4b557287456e0a94808d13c2 208 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 2.4E-6 T 11-10-2018 SYN_01946 f6606e4e4b557287456e0a94808d13c2 208 SUPERFAMILY SSF52317 1 189 6.79E-58 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like SYN_01946 f6606e4e4b557287456e0a94808d13c2 208 Pfam PF00117 Glutamine amidotransferase class-I 4 185 4.5E-55 T 11-10-2018 IPR017926 Glutamine amidotransferase SYN_00562 82505b3025df33d1c2a46321bc1e95d1 151 Gene3D G3DSA:3.40.630.30 1 143 4.0E-17 T 11-10-2018 SYN_00562 82505b3025df33d1c2a46321bc1e95d1 151 Pfam PF00583 Acetyltransferase (GNAT) family 34 133 8.5E-10 T 11-10-2018 IPR000182 GNAT domain SYN_00562 82505b3025df33d1c2a46321bc1e95d1 151 SUPERFAMILY SSF55729 4 133 6.0E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase SYN_00723 ace434fce08e1bb230804a97395315bd 404 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 89 135 1.7E-12 T 11-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain SYN_00723 ace434fce08e1bb230804a97395315bd 404 Pfam PF01610 Transposase 153 392 4.5E-77 T 11-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SYN_02960 01137358504a0f706a490d2f2a9b9718 452 Gene3D G3DSA:2.160.10.10 40 274 1.1E-18 T 11-10-2018 SYN_02960 01137358504a0f706a490d2f2a9b9718 452 SUPERFAMILY SSF51161 73 266 5.7E-9 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily SYN_02744 9c93e4591150a23cfc249623da04c6f0 406 Pfam PF02371 Transposase IS116/IS110/IS902 family 280 365 4.8E-25 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 SYN_02744 9c93e4591150a23cfc249623da04c6f0 406 Pfam PF01548 Transposase 19 173 1.8E-40 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 SYN_03169 8f7d682b80d3c2d82c0c18b5ffed3fd3 270 Pfam PF03734 L,D-transpeptidase catalytic domain 67 253 1.2E-7 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 SYN_02381 2af5c1d04d6637fa1749525bc6649f28 74 Gene3D G3DSA:3.40.50.880 1 71 1.2E-6 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like SYN_02295 e19f6da0a4d5521277ce5795a3b718ce 178 Pfam PF08873 Domain of unknown function (DUF1834) 1 134 2.3E-12 T 11-10-2018 IPR014972 Bacteriophage Mu, Gp37 SYN_00111 78c8a13b4e3f4334c10daa9e71a97148 169 Pfam PF07883 Cupin domain 71 146 1.3E-13 T 11-10-2018 IPR013096 Cupin 2, conserved barrel SYN_00111 78c8a13b4e3f4334c10daa9e71a97148 169 Gene3D G3DSA:2.60.120.10 46 169 2.6E-40 T 11-10-2018 IPR014710 RmlC-like jelly roll fold SYN_00111 78c8a13b4e3f4334c10daa9e71a97148 169 SUPERFAMILY SSF51182 32 151 4.36E-25 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily SYN_01831 0853ad6a250e60d72c79bc501a4094e8 291 SUPERFAMILY SSF56281 18 206 4.69E-14 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_01831 0853ad6a250e60d72c79bc501a4094e8 291 Gene3D G3DSA:3.60.15.10 18 273 5.6E-27 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like SYN_00068 1715f7289a8470ed565a79c19dc39308 232 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 11-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00068 1715f7289a8470ed565a79c19dc39308 232 PIRSF PIRSF002155 1 226 1.7E-77 T 11-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 SYN_00068 1715f7289a8470ed565a79c19dc39308 232 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 4 225 8.1E-101 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 SYN_00068 1715f7289a8470ed565a79c19dc39308 232 Pfam PF00687 Ribosomal protein L1p/L10e family 33 220 1.1E-53 T 11-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein SYN_00068 1715f7289a8470ed565a79c19dc39308 232 Gene3D G3DSA:3.40.50.790 68 159 2.6E-82 T 11-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich SYN_00068 1715f7289a8470ed565a79c19dc39308 232 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.851 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 SYN_00068 1715f7289a8470ed565a79c19dc39308 232 Gene3D G3DSA:3.30.190.20 21 225 2.6E-82 T 11-10-2018 SYN_00068 1715f7289a8470ed565a79c19dc39308 232 SUPERFAMILY SSF56808 8 225 1.31E-82 T 11-10-2018 IPR023674 Ribosomal protein L1-like SYN_00479 ffd7efd6644fc8bba0b2858d81795206 69 SUPERFAMILY SSF51230 2 69 2.22E-21 T 11-10-2018 IPR011053 Single hybrid motif SYN_00479 ffd7efd6644fc8bba0b2858d81795206 69 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 25 42 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 SYN_00479 ffd7efd6644fc8bba0b2858d81795206 69 Pfam PF00364 Biotin-requiring enzyme 2 68 1.1E-20 T 11-10-2018 IPR000089 Biotin/lipoyl attachment SYN_00479 ffd7efd6644fc8bba0b2858d81795206 69 Gene3D G3DSA:2.40.50.100 1 69 1.1E-22 T 11-10-2018 SYN_02749 4b08479c7962baa5a6db2ddcd4e4d293 163 SUPERFAMILY SSF52200 3 85 5.62E-10 T 11-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily SYN_02749 4b08479c7962baa5a6db2ddcd4e4d293 163 Gene3D G3DSA:3.40.50.10140 1 134 1.1E-12 T 11-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily SYN_02749 4b08479c7962baa5a6db2ddcd4e4d293 163 Pfam PF13676 TIR domain 3 102 7.1E-12 T 11-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 SYN_02752 e1fe2e8148584605ff322d5738ce3130 1168 Pfam PF02384 N-6 DNA Methylase 489 611 1.2E-6 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 SYN_02752 e1fe2e8148584605ff322d5738ce3130 1168 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 524 548 1.9E-6 T 11-10-2018 SYN_02752 e1fe2e8148584605ff322d5738ce3130 1168 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 302 316 1.9E-6 T 11-10-2018 SYN_02752 e1fe2e8148584605ff322d5738ce3130 1168 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 491 503 1.9E-6 T 11-10-2018 SYN_02752 e1fe2e8148584605ff322d5738ce3130 1168 SUPERFAMILY SSF53335 85 607 5.25E-47 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_00707 78daa192b5efccd5a47277e9ba877842 178 Pfam PF11159 Protein of unknown function (DUF2939) 13 104 3.2E-27 T 11-10-2018 IPR021330 Protein of unknown function DUF2939 SYN_00279 e63ae7a0e492a4b7947ef1948ecdf792 477 SUPERFAMILY SSF102114 118 402 1.0E-31 T 11-10-2018 SYN_00279 e63ae7a0e492a4b7947ef1948ecdf792 477 Pfam PF13353 4Fe-4S single cluster domain 119 198 4.7E-7 T 11-10-2018 SYN_00279 e63ae7a0e492a4b7947ef1948ecdf792 477 Gene3D G3DSA:3.20.20.70 112 414 3.0E-43 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_01668 576a468e8b69fbeb9e7cb6bdf07ff387 340 Pfam PF02424 ApbE family 44 320 2.1E-71 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 SYN_01668 576a468e8b69fbeb9e7cb6bdf07ff387 340 PIRSF PIRSF006268 6 338 1.0E-79 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 SYN_01668 576a468e8b69fbeb9e7cb6bdf07ff387 340 Gene3D G3DSA:3.10.520.20 31 339 3.8E-92 T 11-10-2018 SYN_01668 576a468e8b69fbeb9e7cb6bdf07ff387 340 SUPERFAMILY SSF143631 36 335 1.39E-81 T 11-10-2018 IPR003374 ApbE-like superfamily SYN_00587 00ce2728e524d2d78cfb0dc50adca68f 140 Pfam PF03899 ATP synthase I chain 24 117 4.8E-17 T 11-10-2018 IPR005598 ATP synthase protein I SYN_00810 f7bfa08a1ca7dd9aaec0c8f0c00b20b1 193 Pfam PF07238 PilZ domain 92 186 1.5E-7 T 11-10-2018 IPR009875 PilZ domain GO:0035438 SYN_00810 f7bfa08a1ca7dd9aaec0c8f0c00b20b1 193 Gene3D G3DSA:2.40.10.220 88 188 1.6E-6 T 11-10-2018 SYN_00810 f7bfa08a1ca7dd9aaec0c8f0c00b20b1 193 SUPERFAMILY SSF141371 92 183 1.35E-7 T 11-10-2018 SYN_03712 8f60c8cbe4474a54831f575bb7a1aad1 128 Pfam PF07883 Cupin domain 59 123 1.2E-14 T 11-10-2018 IPR013096 Cupin 2, conserved barrel SYN_03712 8f60c8cbe4474a54831f575bb7a1aad1 128 Gene3D G3DSA:2.60.120.10 6 125 3.9E-19 T 11-10-2018 IPR014710 RmlC-like jelly roll fold SYN_03712 8f60c8cbe4474a54831f575bb7a1aad1 128 SUPERFAMILY SSF51182 27 127 3.67E-20 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily SYN_02766 125929fb31583bc8ac548f4808e328b4 189 Pfam PF01965 DJ-1/PfpI family 23 186 8.7E-55 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 SYN_02766 125929fb31583bc8ac548f4808e328b4 189 Gene3D G3DSA:3.40.50.880 21 188 1.3E-54 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like SYN_02766 125929fb31583bc8ac548f4808e328b4 189 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 25 187 2.6E-56 T 11-10-2018 IPR006286 Deglycase PfpI SYN_02766 125929fb31583bc8ac548f4808e328b4 189 SUPERFAMILY SSF52317 23 187 9.47E-52 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like SYN_00391 9b0ea2b20c17b04c7d8dee3267ae53d1 332 Gene3D G3DSA:3.40.50.2300 154 326 2.8E-72 T 11-10-2018 SYN_00391 9b0ea2b20c17b04c7d8dee3267ae53d1 332 SUPERFAMILY SSF53822 50 328 1.65E-55 T 11-10-2018 IPR028082 Periplasmic binding protein-like I SYN_00391 9b0ea2b20c17b04c7d8dee3267ae53d1 332 Gene3D G3DSA:3.40.50.2300 57 317 2.8E-72 T 11-10-2018 SYN_00391 9b0ea2b20c17b04c7d8dee3267ae53d1 332 Pfam PF13407 Periplasmic binding protein domain 50 304 1.4E-54 T 11-10-2018 IPR025997 Periplasmic binding protein SYN_01080 af59dc6f4ad166ca48817d7ac25f39d1 493 Gene3D G3DSA:3.30.70.1450 404 484 4.7E-17 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 SYN_01080 af59dc6f4ad166ca48817d7ac25f39d1 493 Pfam PF02080 TrkA-C domain 415 481 2.1E-15 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SYN_01080 af59dc6f4ad166ca48817d7ac25f39d1 493 Gene3D G3DSA:1.20.1530.20 5 388 1.0E-17 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily SYN_01080 af59dc6f4ad166ca48817d7ac25f39d1 493 Pfam PF00999 Sodium/hydrogen exchanger family 15 386 4.0E-46 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SYN_01080 af59dc6f4ad166ca48817d7ac25f39d1 493 SUPERFAMILY SSF116726 409 482 1.31E-14 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 SYN_00864 8bfa5b82bc60207bffe0eb4080c33fb9 661 Pfam PF00999 Sodium/hydrogen exchanger family 8 371 8.0E-62 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SYN_00864 8bfa5b82bc60207bffe0eb4080c33fb9 661 SUPERFAMILY SSF51735 401 540 1.58E-27 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_00864 8bfa5b82bc60207bffe0eb4080c33fb9 661 Gene3D G3DSA:3.30.70.1450 579 654 1.7E-15 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 SYN_00864 8bfa5b82bc60207bffe0eb4080c33fb9 661 Gene3D G3DSA:1.20.1530.20 3 379 9.0E-81 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily SYN_00864 8bfa5b82bc60207bffe0eb4080c33fb9 661 SUPERFAMILY SSF116726 580 650 1.28E-13 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 SYN_00864 8bfa5b82bc60207bffe0eb4080c33fb9 661 Gene3D G3DSA:3.40.50.720 401 560 2.5E-31 T 11-10-2018 SYN_00864 8bfa5b82bc60207bffe0eb4080c33fb9 661 Pfam PF02254 TrkA-N domain 405 520 9.7E-18 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SYN_00864 8bfa5b82bc60207bffe0eb4080c33fb9 661 Pfam PF02080 TrkA-C domain 583 649 5.2E-12 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SYN_00507 168bc73428f43e0c0304464680cf860e 324 Pfam PF00882 Zinc dependent phospholipase C 6 197 6.7E-34 T 11-10-2018 IPR029002 Phospholipase C/D Reactome: R-HSA-163125 SYN_02613 8ddcf79362dc257647a0f124b72b53de 111 SUPERFAMILY SSF51182 10 109 1.04E-21 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily SYN_02613 8ddcf79362dc257647a0f124b72b53de 111 Pfam PF07883 Cupin domain 42 107 2.7E-9 T 11-10-2018 IPR013096 Cupin 2, conserved barrel SYN_02613 8ddcf79362dc257647a0f124b72b53de 111 Gene3D G3DSA:2.60.120.10 4 110 7.0E-33 T 11-10-2018 IPR014710 RmlC-like jelly roll fold SYN_02199 fa51a181957ac32963060d2e2d28bca0 287 Pfam PF01435 Peptidase family M48 106 275 2.5E-32 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SYN_01498 9ad6e792bd86e0118e74aae920ae05a9 327 Pfam PF00482 Type II secretion system (T2SS), protein F 159 283 4.1E-18 T 11-10-2018 IPR018076 Type II secretion system F domain SYN_01498 9ad6e792bd86e0118e74aae920ae05a9 327 Gene3D G3DSA:1.20.81.30 147 262 1.4E-7 T 11-10-2018 SYN_03353 1a36be1f9267a4c4f912ff15e70191eb 204 SUPERFAMILY SSF53271 7 164 1.97E-36 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like SYN_03353 1a36be1f9267a4c4f912ff15e70191eb 204 Pfam PF00156 Phosphoribosyl transferase domain 15 155 7.9E-22 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 SYN_03353 1a36be1f9267a4c4f912ff15e70191eb 204 Gene3D G3DSA:3.40.50.2020 10 185 7.4E-40 T 11-10-2018 SYN_02820 66e18f43b8dc254eced905ecd0c17467 255 Pfam PF00460 Flagella basal body rod protein 35 53 3.0E-5 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 SYN_02820 66e18f43b8dc254eced905ecd0c17467 255 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 180 243 3.0E-12 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain SYN_02820 66e18f43b8dc254eced905ecd0c17467 255 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 33 137 1.2E-27 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G SYN_02820 66e18f43b8dc254eced905ecd0c17467 255 SUPERFAMILY SSF117143 94 212 2.22E-17 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like SYN_02141 34c791c14e336c6f5c33819672d46c41 128 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 11 71 2.4E-5 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 SYN_02141 34c791c14e336c6f5c33819672d46c41 128 SUPERFAMILY SSF50475 12 106 5.24E-6 T 11-10-2018 SYN_02141 34c791c14e336c6f5c33819672d46c41 128 Gene3D G3DSA:2.30.110.10 1 124 9.5E-32 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 SYN_02224 d318185103227de2c45fe4492c475ab7 237 SMART SM00382 35 233 1.8E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_02224 d318185103227de2c45fe4492c475ab7 237 Pfam PF00005 ABC transporter 26 186 1.5E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_02224 d318185103227de2c45fe4492c475ab7 237 SUPERFAMILY SSF52540 8 235 3.33E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02224 d318185103227de2c45fe4492c475ab7 237 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_02224 d318185103227de2c45fe4492c475ab7 237 Gene3D G3DSA:3.40.50.300 6 237 2.8E-61 T 11-10-2018 SYN_00186 5db5583a6ef51b62e16e9b35a36cdd35 148 Gene3D G3DSA:3.30.420.270 71 139 2.9E-17 T 11-10-2018 SYN_00186 5db5583a6ef51b62e16e9b35a36cdd35 148 Pfam PF02472 Biopolymer transport protein ExbD/TolR 20 143 1.2E-29 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 SYN_02826 d731697a0ae6db0cdec24e8b3d6065cb 192 Pfam PF03748 Flagellar basal body-associated protein FliL 97 191 6.4E-9 T 11-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 SYN_00033 2ebffac9e57b839fa70007f59637b95f 220 Gene3D G3DSA:1.20.1540.10 8 220 3.5E-31 T 11-10-2018 IPR035952 Rhomboid-like superfamily SYN_00033 2ebffac9e57b839fa70007f59637b95f 220 Pfam PF01694 Rhomboid family 69 219 2.3E-39 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 SYN_00033 2ebffac9e57b839fa70007f59637b95f 220 SUPERFAMILY SSF144091 10 218 1.7E-40 T 11-10-2018 SYN_01619 58ac222b20d07abe88fefa653e862756 303 Pfam PF00149 Calcineurin-like phosphoesterase 71 239 7.3E-10 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 SYN_01619 58ac222b20d07abe88fefa653e862756 303 SUPERFAMILY SSF56300 67 300 4.91E-34 T 11-10-2018 SYN_01619 58ac222b20d07abe88fefa653e862756 303 Gene3D G3DSA:3.60.21.10 69 254 7.1E-20 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like SYN_02750 d42c7805aa7119b3bfd736b82195b8a5 185 SUPERFAMILY SSF52206 62 129 9.42E-5 T 11-10-2018 IPR036490 Hypothetical protein MTH538 superfamily SYN_02750 d42c7805aa7119b3bfd736b82195b8a5 185 Gene3D G3DSA:3.40.50.10140 21 134 5.2E-5 T 11-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily SYN_02750 d42c7805aa7119b3bfd736b82195b8a5 185 Pfam PF08937 MTH538 TIR-like domain (DUF1863) 24 141 8.4E-29 T 11-10-2018 IPR015032 MTH538 TIR-like domain SYN_02821 c89ab744497e2434536f771d6db88c6d 92 Gene3D G3DSA:3.40.1690.10 4 85 1.9E-26 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal SYN_02821 c89ab744497e2434536f771d6db88c6d 92 Pfam PF01312 FlhB HrpN YscU SpaS Family 6 79 2.3E-20 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 SYN_02821 c89ab744497e2434536f771d6db88c6d 92 SUPERFAMILY SSF160544 5 83 3.92E-25 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal SYN_02393 ff9eb462471bf2663f74c78b1cdac078 392 Gene3D G3DSA:3.75.10.10 48 391 5.3E-127 T 11-10-2018 SYN_02393 ff9eb462471bf2663f74c78b1cdac078 392 SUPERFAMILY SSF55909 46 389 2.14E-120 T 11-10-2018 SYN_02393 ff9eb462471bf2663f74c78b1cdac078 392 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 54 388 3.8E-113 T 11-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 SYN_01528 3dbd84ec29f16976f1cf6229b8382dd0 426 PRINTS PR00447 Natural resistance-associated macrophage protein signature 369 388 2.3E-5 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 SYN_01528 3dbd84ec29f16976f1cf6229b8382dd0 426 PRINTS PR00447 Natural resistance-associated macrophage protein signature 208 231 2.3E-5 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 SYN_01528 3dbd84ec29f16976f1cf6229b8382dd0 426 PRINTS PR00447 Natural resistance-associated macrophage protein signature 108 134 2.3E-5 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 SYN_01528 3dbd84ec29f16976f1cf6229b8382dd0 426 Pfam PF01566 Natural resistance-associated macrophage protein 49 399 9.9E-98 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 SYN_02500 1c8eba695fe4f396895a439ced5f9a86 193 SUPERFAMILY SSF53323 1 180 1.57E-35 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 SYN_02500 1c8eba695fe4f396895a439ced5f9a86 193 Gene3D G3DSA:3.40.920.10 1 184 1.5E-51 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 SYN_02500 1c8eba695fe4f396895a439ced5f9a86 193 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 11 169 2.4E-33 T 11-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SYN_01642 338e8731f7320171f0f7f712aea138bf 179 Gene3D G3DSA:3.30.70.20 9 162 1.4E-10 T 11-10-2018 SYN_01642 338e8731f7320171f0f7f712aea138bf 179 SUPERFAMILY SSF54862 10 140 2.27E-18 T 11-10-2018 SYN_01972 567b322e7a9e2712b58d3094eb432fee 152 Gene3D G3DSA:1.25.40.10 59 150 6.0E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_01972 567b322e7a9e2712b58d3094eb432fee 152 SUPERFAMILY SSF52833 6 72 3.66E-5 T 11-10-2018 IPR036249 Thioredoxin-like superfamily SYN_01382 3e7a6e0b207938789abd780ee101d07a 307 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 38 82 7.2E-8 T 11-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger SYN_01382 3e7a6e0b207938789abd780ee101d07a 307 Pfam PF01610 Transposase 153 306 9.6E-43 T 11-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SYN_01128 e800f3e589ebe6e3730bba84077071d4 410 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 39 399 6.0E-125 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SYN_01128 e800f3e589ebe6e3730bba84077071d4 410 SUPERFAMILY SSF53383 32 399 2.58E-112 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase SYN_01128 e800f3e589ebe6e3730bba84077071d4 410 PIRSF PIRSF000390 27 403 4.7E-117 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SYN_01128 e800f3e589ebe6e3730bba84077071d4 410 Gene3D G3DSA:3.90.1150.10 281 402 4.4E-29 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 SYN_01128 e800f3e589ebe6e3730bba84077071d4 410 Gene3D G3DSA:3.40.640.10 19 280 6.5E-99 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 SYN_00605 9a888cd745595314c8b2803fee8f8ed8 222 Pfam PF01292 Prokaryotic cytochrome b561 10 184 4.3E-26 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 SYN_00605 9a888cd745595314c8b2803fee8f8ed8 222 SUPERFAMILY SSF81342 6 207 4.87E-41 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 SYN_00605 9a888cd745595314c8b2803fee8f8ed8 222 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 7 203 8.3E-45 T 11-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 SYN_00605 9a888cd745595314c8b2803fee8f8ed8 222 Gene3D G3DSA:1.20.950.20 2 208 1.4E-60 T 11-10-2018 SYN_02871 a6b746726afc227b9b2561b5fb475347 166 Gene3D G3DSA:1.20.1290.10 3 157 2.0E-30 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 SYN_02871 a6b746726afc227b9b2561b5fb475347 166 Pfam PF02627 Carboxymuconolactone decarboxylase family 75 150 4.0E-13 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SYN_02871 a6b746726afc227b9b2561b5fb475347 166 SUPERFAMILY SSF69118 40 156 1.14E-25 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 SYN_01703 4d3eea83984f952d50ec345ddabad2c7 153 Pfam PF04028 Domain of unknown function (DUF374) 1 59 3.0E-17 T 11-10-2018 IPR007172 Domain of unknown function DUF374 SYN_02379 e938a3f7828a9406b806932e7910762b 239 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 36 216 5.6E-61 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 SYN_02379 e938a3f7828a9406b806932e7910762b 239 SUPERFAMILY SSF55729 5 226 1.06E-87 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase SYN_02379 e938a3f7828a9406b806932e7910762b 239 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 33 202 5.9E-72 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 SYN_02379 e938a3f7828a9406b806932e7910762b 239 Gene3D G3DSA:3.40.630.70 59 233 5.9E-63 T 11-10-2018 SYN_02379 e938a3f7828a9406b806932e7910762b 239 Gene3D G3DSA:2.30.210.20 6 58 3.2E-23 T 11-10-2018 SYN_02379 e938a3f7828a9406b806932e7910762b 239 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 239 90.257 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 SYN_01117 4006f91fb2ce42107fb4cca53f9c9830 190 TIGRFAM TIGR03370 VPLPA-CTERM: VPLPA-CTERM protein sorting domain 165 188 9.5E-10 T 11-10-2018 IPR022472 VPLPA-CTERM protein sorting domain SYN_01117 4006f91fb2ce42107fb4cca53f9c9830 190 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 165 187 0.0036 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain SYN_01822 1cb7be04f95fff5f38eb032eec60888d 713 Gene3D G3DSA:3.40.50.300 416 673 2.5E-50 T 11-10-2018 SYN_01822 1cb7be04f95fff5f38eb032eec60888d 713 SUPERFAMILY SSF52540 115 666 5.91E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01822 1cb7be04f95fff5f38eb032eec60888d 713 Pfam PF01935 Domain of unknown function DUF87 151 318 7.0E-22 T 11-10-2018 IPR002789 Helicase HerA, central domain SYN_01822 1cb7be04f95fff5f38eb032eec60888d 713 Gene3D G3DSA:3.40.50.300 132 317 2.4E-18 T 11-10-2018 SYN_00992 0b9daa1286d38b68bf04ce42b06d7be5 140 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_00992 0b9daa1286d38b68bf04ce42b06d7be5 140 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 40.488 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00992 0b9daa1286d38b68bf04ce42b06d7be5 140 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 9.7E-52 T 11-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 SYN_00992 0b9daa1286d38b68bf04ce42b06d7be5 140 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_00992 0b9daa1286d38b68bf04ce42b06d7be5 140 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 2.0E-62 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00992 0b9daa1286d38b68bf04ce42b06d7be5 140 Gene3D G3DSA:3.90.1170.10 1 139 1.1E-55 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 SYN_00992 0b9daa1286d38b68bf04ce42b06d7be5 140 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.2E-40 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00992 0b9daa1286d38b68bf04ce42b06d7be5 140 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.2E-40 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00992 0b9daa1286d38b68bf04ce42b06d7be5 140 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.2E-40 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00992 0b9daa1286d38b68bf04ce42b06d7be5 140 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.2E-40 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_00992 0b9daa1286d38b68bf04ce42b06d7be5 140 SUPERFAMILY SSF54686 1 135 3.92E-58 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 SYN_00621 56016942f5ee9e415c9b56b7ef8aa298 433 Pfam PF01676 Metalloenzyme superfamily 1 402 2.8E-35 T 11-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 SYN_00621 56016942f5ee9e415c9b56b7ef8aa298 433 TIGRFAM TIGR00306 apgM: phosphoglycerate mutase (2,3-diphosphoglycerate-independent), archaeal form 4 403 9.5E-102 T 11-10-2018 IPR004456 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GO:0003824|GO:0046537 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SYN_00621 56016942f5ee9e415c9b56b7ef8aa298 433 PIRSF PIRSF006392 1 409 2.2E-103 T 11-10-2018 IPR004456 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GO:0003824|GO:0046537 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SYN_00621 56016942f5ee9e415c9b56b7ef8aa298 433 Pfam PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 37 211 1.4E-30 T 11-10-2018 IPR004456 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GO:0003824|GO:0046537 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SYN_00621 56016942f5ee9e415c9b56b7ef8aa298 433 Gene3D G3DSA:3.30.70.2130 77 233 1.4E-85 T 11-10-2018 SYN_00621 56016942f5ee9e415c9b56b7ef8aa298 433 SUPERFAMILY SSF53649 1 374 2.94E-31 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 SYN_00621 56016942f5ee9e415c9b56b7ef8aa298 433 Gene3D G3DSA:3.40.720.10 4 398 1.4E-85 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 SYN_02130 8bfce9c5001c08ac0bdfb6efa6873424 301 Hamap MF_00548 Zinc transporter ZupT [zupT]. 4 301 32.039 T 11-10-2018 IPR023498 Zinc transporter ZupT SYN_02130 8bfce9c5001c08ac0bdfb6efa6873424 301 Pfam PF02535 ZIP Zinc transporter 110 295 5.9E-28 T 11-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 SYN_01174 047aeae503781c24239e2f6c3a2865ec 87 SMART SM00834 1 41 1.7E-16 T 11-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain SYN_01174 047aeae503781c24239e2f6c3a2865ec 87 Pfam PF09723 Zinc ribbon domain 1 40 6.2E-15 T 11-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain SYN_01174 047aeae503781c24239e2f6c3a2865ec 87 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 2.5E-19 T 11-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain SYN_03061 bfb9b9b4f4adc4d2d08dac0579f9c71d 129 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 35 2.5E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site SYN_03061 bfb9b9b4f4adc4d2d08dac0579f9c71d 129 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 34 8.5E-11 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site SYN_03061 bfb9b9b4f4adc4d2d08dac0579f9c71d 129 SUPERFAMILY SSF54523 15 93 5.81E-16 T 11-10-2018 SYN_03061 bfb9b9b4f4adc4d2d08dac0579f9c71d 129 Gene3D G3DSA:3.30.700.10 15 127 1.2E-18 T 11-10-2018 SYN_03170 8ec9331f20923f69641f1cc160e3389e 123 SUPERFAMILY SSF103481 2 60 3.27E-10 T 11-10-2018 SYN_03170 8ec9331f20923f69641f1cc160e3389e 123 Pfam PF00892 EamA-like transporter family 4 60 2.1E-6 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 SYN_01610 bab172dc3ee580d114f9a8d7663d0e57 280 Pfam PF00999 Sodium/hydrogen exchanger family 23 277 7.0E-37 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SYN_01610 bab172dc3ee580d114f9a8d7663d0e57 280 Gene3D G3DSA:1.20.1530.20 13 280 1.2E-52 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily SYN_00820 1ece97643623a7bd7bd9b2ea01aae504 397 SUPERFAMILY SSF53756 15 394 8.37E-53 T 11-10-2018 SYN_00820 1ece97643623a7bd7bd9b2ea01aae504 397 Pfam PF00534 Glycosyl transferases group 1 209 371 3.2E-28 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 SYN_00820 1ece97643623a7bd7bd9b2ea01aae504 397 Gene3D G3DSA:3.40.50.2000 201 374 1.0E-36 T 11-10-2018 SYN_02844 814bc3a8e45860833b06d66519cfc0b9 155 Gene3D G3DSA:3.40.50.510 21 153 1.2E-38 T 11-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 SYN_02844 814bc3a8e45860833b06d66519cfc0b9 155 Pfam PF03610 PTS system fructose IIA component 23 133 1.1E-23 T 11-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SYN_02844 814bc3a8e45860833b06d66519cfc0b9 155 SUPERFAMILY SSF53062 21 150 6.02E-35 T 11-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 SYN_00550 a2979a94ae8c9a24adb95e0f2cef921a 369 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 6 367 27.467 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SYN_00550 a2979a94ae8c9a24adb95e0f2cef921a 369 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 12 364 3.4E-134 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SYN_00550 a2979a94ae8c9a24adb95e0f2cef921a 369 Pfam PF01098 Cell cycle protein 14 364 8.3E-103 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SYN_00550 a2979a94ae8c9a24adb95e0f2cef921a 369 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 322 346 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SYN_00905 595f35797654fac4adadc00e10be503a 597 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 20 583 1.1E-232 T 11-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SYN_00905 595f35797654fac4adadc00e10be503a 597 Hamap MF_01569 Proline--tRNA ligase [proS]. 20 587 42.542 T 11-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SYN_00905 595f35797654fac4adadc00e10be503a 597 SUPERFAMILY SSF52954 480 591 3.02E-33 T 11-10-2018 SYN_00905 595f35797654fac4adadc00e10be503a 597 Gene3D G3DSA:3.30.930.10 30 482 8.4E-265 T 11-10-2018 SYN_00905 595f35797654fac4adadc00e10be503a 597 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 114 476 2.6E-49 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 SYN_00905 595f35797654fac4adadc00e10be503a 597 Gene3D G3DSA:3.40.50.800 23 570 8.4E-265 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily SYN_00905 595f35797654fac4adadc00e10be503a 597 Pfam PF04073 Aminoacyl-tRNA editing domain 278 396 5.6E-30 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SYN_00905 595f35797654fac4adadc00e10be503a 597 Pfam PF03129 Anticodon binding domain 492 583 2.4E-24 T 11-10-2018 IPR004154 Anticodon-binding SYN_00905 595f35797654fac4adadc00e10be503a 597 SUPERFAMILY SSF55826 238 404 1.15E-32 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 SYN_00905 595f35797654fac4adadc00e10be503a 597 Gene3D G3DSA:3.90.960.10 259 406 8.4E-265 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 SYN_00905 595f35797654fac4adadc00e10be503a 597 PIRSF PIRSF001535 20 590 2.9E-291 T 11-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SYN_00905 595f35797654fac4adadc00e10be503a 597 SUPERFAMILY SSF55681 29 495 2.87E-107 T 11-10-2018 SYN_00905 595f35797654fac4adadc00e10be503a 597 PRINTS PR01046 Prolyl-tRNA synthetase signature 153 161 8.3E-20 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 SYN_00905 595f35797654fac4adadc00e10be503a 597 PRINTS PR01046 Prolyl-tRNA synthetase signature 163 174 8.3E-20 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 SYN_00905 595f35797654fac4adadc00e10be503a 597 PRINTS PR01046 Prolyl-tRNA synthetase signature 87 105 8.3E-20 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 SYN_00905 595f35797654fac4adadc00e10be503a 597 PRINTS PR01046 Prolyl-tRNA synthetase signature 123 134 8.3E-20 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 SYN_00328 a16db4a4897eeda1d5136ebfeddce442 504 Pfam PF05762 VWA domain containing CoxE-like protein 265 495 2.7E-31 T 11-10-2018 IPR008912 Uncharacterised protein family CoxE-like SYN_01523 8fcc4dc275056c36dc519d9e42be05ec 112 Pfam PF02699 Preprotein translocase subunit 29 103 1.6E-29 T 11-10-2018 IPR003849 Preprotein translocase YajC SYN_01523 8fcc4dc275056c36dc519d9e42be05ec 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 46 64 4.5E-13 T 11-10-2018 IPR003849 Preprotein translocase YajC SYN_01523 8fcc4dc275056c36dc519d9e42be05ec 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 26 46 4.5E-13 T 11-10-2018 IPR003849 Preprotein translocase YajC SYN_01523 8fcc4dc275056c36dc519d9e42be05ec 112 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 27 106 6.0E-27 T 11-10-2018 IPR003849 Preprotein translocase YajC SYN_01523 8fcc4dc275056c36dc519d9e42be05ec 112 SMART SM01323 24 106 5.0E-43 T 11-10-2018 IPR003849 Preprotein translocase YajC SYN_01562 ca256e1337394940d36de223a3e34891 202 Gene3D G3DSA:1.20.120.1630 1 150 7.4E-24 T 11-10-2018 SYN_01562 ca256e1337394940d36de223a3e34891 202 Pfam PF04191 Phospholipid methyltransferase 42 133 7.8E-10 T 11-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 SYN_03368 ae2790a3bbcf76c6f26cb03035a8608f 55 TIGRFAM TIGR03655 anti_R_Lar: restriction alleviation protein, Lar family 4 54 2.0E-20 T 11-10-2018 IPR019908 Endodeoxyribonuclease toxin RalR SYN_03368 ae2790a3bbcf76c6f26cb03035a8608f 55 Pfam PF14354 Restriction alleviation protein Lar 2 54 4.8E-16 T 11-10-2018 SYN_01738 a03bd40347b687d53cdc09de1120dd62 115 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 31 106 1.0E-14 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 SYN_01738 a03bd40347b687d53cdc09de1120dd62 115 Hamap MF_00910 Cell division protein FtsL [ftsL]. 27 108 13.82 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 SYN_01738 a03bd40347b687d53cdc09de1120dd62 115 Pfam PF04999 Cell division protein FtsL 33 106 1.9E-11 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 SYN_00362 31c55c5b197fa9e8f9c43f2c2ba2b374 232 Pfam PF09335 SNARE associated Golgi protein 76 193 1.5E-29 T 11-10-2018 IPR032816 SNARE associated Golgi protein SYN_01510 2144a790a4b87f14cb6a4831ec3dbd47 94 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 48 83 2.8E-5 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family SYN_01510 2144a790a4b87f14cb6a4831ec3dbd47 94 SUPERFAMILY SSF143011 40 83 3.14E-10 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily SYN_01510 2144a790a4b87f14cb6a4831ec3dbd47 94 Gene3D G3DSA:3.30.2310.20 38 85 1.2E-10 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily SYN_02068 195d1f9546d5851ad11ec82e6bd35503 328 Pfam PF02470 MlaD protein 37 135 2.3E-13 T 11-10-2018 IPR003399 Mce/MlaD SYN_01599 8aa4c9212bc9d2262b3cce81741080e9 130 Gene3D G3DSA:3.30.420.80 1 130 4.0E-56 T 11-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 SYN_01599 8aa4c9212bc9d2262b3cce81741080e9 130 Pfam PF00411 Ribosomal protein S11 20 129 1.7E-50 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SYN_01599 8aa4c9212bc9d2262b3cce81741080e9 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 11 127 1.8E-59 T 11-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SYN_01599 8aa4c9212bc9d2262b3cce81741080e9 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 130 34.602 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SYN_01599 8aa4c9212bc9d2262b3cce81741080e9 130 PIRSF PIRSF002131 1 130 1.8E-55 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SYN_01599 8aa4c9212bc9d2262b3cce81741080e9 130 ProSitePatterns PS00054 Ribosomal protein S11 signature. 98 120 - T 11-10-2018 IPR018102 Ribosomal S11, conserved site SYN_01599 8aa4c9212bc9d2262b3cce81741080e9 130 SUPERFAMILY SSF53137 15 130 4.8E-51 T 11-10-2018 SYN_02864 cb940ded99be5b1f4d6ac0392bdd4230 409 Pfam PF04381 Putative exonuclease, RdgC 44 207 8.0E-12 T 11-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 SYN_02173 7d6a97eebc514d28095083961b4610d6 208 SUPERFAMILY SSF53474 5 200 7.26E-29 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold SYN_02173 7d6a97eebc514d28095083961b4610d6 208 Gene3D G3DSA:3.40.50.1820 8 208 3.9E-40 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold SYN_00240 d35a561d298a4b9193cd67c1ff2b3384 328 Gene3D G3DSA:1.10.287.470 108 173 3.6E-8 T 11-10-2018 SYN_00240 d35a561d298a4b9193cd67c1ff2b3384 328 Gene3D G3DSA:2.40.30.170 237 327 5.5E-23 T 11-10-2018 SYN_00240 d35a561d298a4b9193cd67c1ff2b3384 328 SUPERFAMILY SSF111369 112 325 2.88E-8 T 11-10-2018 SYN_00240 d35a561d298a4b9193cd67c1ff2b3384 328 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 36 321 2.1E-24 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SYN_00180 388910b2d27573b81336c78e2acdf3f4 284 SUPERFAMILY SSF117892 69 202 9.42E-12 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily SYN_00180 388910b2d27573b81336c78e2acdf3f4 284 SMART SM00244 37 198 5.0E-31 T 11-10-2018 IPR001107 Band 7 domain SYN_00180 388910b2d27573b81336c78e2acdf3f4 284 Pfam PF01145 SPFH domain / Band 7 family 41 228 7.2E-29 T 11-10-2018 IPR001107 Band 7 domain SYN_00180 388910b2d27573b81336c78e2acdf3f4 284 PRINTS PR00679 Prohibitin signature 168 187 1.0E-15 T 11-10-2018 IPR000163 Prohibitin GO:0016020 Reactome: R-HSA-8949664 SYN_00180 388910b2d27573b81336c78e2acdf3f4 284 PRINTS PR00679 Prohibitin signature 122 140 1.0E-15 T 11-10-2018 IPR000163 Prohibitin GO:0016020 Reactome: R-HSA-8949664 SYN_00180 388910b2d27573b81336c78e2acdf3f4 284 PRINTS PR00679 Prohibitin signature 216 232 1.0E-15 T 11-10-2018 IPR000163 Prohibitin GO:0016020 Reactome: R-HSA-8949664 SYN_00180 388910b2d27573b81336c78e2acdf3f4 284 PRINTS PR00679 Prohibitin signature 81 97 1.0E-15 T 11-10-2018 IPR000163 Prohibitin GO:0016020 Reactome: R-HSA-8949664 SYN_00180 388910b2d27573b81336c78e2acdf3f4 284 PRINTS PR00679 Prohibitin signature 145 161 1.0E-15 T 11-10-2018 IPR000163 Prohibitin GO:0016020 Reactome: R-HSA-8949664 SYN_00180 388910b2d27573b81336c78e2acdf3f4 284 PRINTS PR00679 Prohibitin signature 193 216 1.0E-15 T 11-10-2018 IPR000163 Prohibitin GO:0016020 Reactome: R-HSA-8949664 SYN_00001 25676ce7dfcd42413f4b1a83fc801cd9 180 Gene3D G3DSA:3.40.50.261 14 177 2.3E-59 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_00001 25676ce7dfcd42413f4b1a83fc801cd9 180 SUPERFAMILY SSF52210 16 174 2.52E-42 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_00001 25676ce7dfcd42413f4b1a83fc801cd9 180 Pfam PF00549 CoA-ligase 41 161 1.5E-12 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_00001 25676ce7dfcd42413f4b1a83fc801cd9 180 PRINTS PR01798 Succinyl-CoA synthase signature 67 85 1.2E-19 T 11-10-2018 SYN_00001 25676ce7dfcd42413f4b1a83fc801cd9 180 PRINTS PR01798 Succinyl-CoA synthase signature 98 111 1.2E-19 T 11-10-2018 SYN_00001 25676ce7dfcd42413f4b1a83fc801cd9 180 PRINTS PR01798 Succinyl-CoA synthase signature 130 147 1.2E-19 T 11-10-2018 SYN_00344 2ab41598d4e983369cd7fa1f4f4e3899 130 Pfam PF10865 Domain of unknown function (DUF2703) 4 119 4.8E-37 T 11-10-2018 IPR021219 Protein of unknown function DUF2703 SYN_00333 7763e8b05bb0beee894b7cdf028d210a 192 Pfam PF13462 Thioredoxin 41 169 6.5E-12 T 11-10-2018 IPR012336 Thioredoxin-like fold SYN_00333 7763e8b05bb0beee894b7cdf028d210a 192 SUPERFAMILY SSF52833 39 175 1.33E-18 T 11-10-2018 IPR036249 Thioredoxin-like superfamily SYN_00333 7763e8b05bb0beee894b7cdf028d210a 192 Gene3D G3DSA:3.40.30.10 37 187 3.8E-12 T 11-10-2018 SYN_02392 45c0c0a4b417ffce1dfb5af67607c1e2 291 SUPERFAMILY SSF56317 6 287 2.88E-86 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily SYN_02392 45c0c0a4b417ffce1dfb5af67607c1e2 291 Pfam PF00795 Carbon-nitrogen hydrolase 10 267 4.7E-57 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 SYN_02392 45c0c0a4b417ffce1dfb5af67607c1e2 291 Gene3D G3DSA:3.60.110.10 1 288 1.4E-93 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily SYN_01631 68dc1fb54d64072d2d50b44d7bac7181 376 SUPERFAMILY SSF56235 134 350 1.8E-20 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal SYN_01631 68dc1fb54d64072d2d50b44d7bac7181 376 Gene3D G3DSA:3.60.20.10 113 367 4.6E-18 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal SYN_00738 6d5df27a22467369c76b11cea0e9c99a 112 SUPERFAMILY SSF51735 7 109 5.58E-5 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_00738 6d5df27a22467369c76b11cea0e9c99a 112 Gene3D G3DSA:3.40.50.720 4 109 8.0E-12 T 11-10-2018 SYN_00930 8c1ef43427f8565b702dd946e0599c24 293 SUPERFAMILY SSF109604 17 281 9.2E-55 T 11-10-2018 SYN_00930 8c1ef43427f8565b702dd946e0599c24 293 Gene3D G3DSA:1.10.3210.10 3 289 2.5E-62 T 11-10-2018 SYN_00930 8c1ef43427f8565b702dd946e0599c24 293 Pfam PF08668 HDOD domain 24 214 5.5E-45 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD SYN_00645 a9ab35db8a2dbb67e732d9d29766bf96 284 Gene3D G3DSA:3.90.580.10 29 125 9.0E-6 T 11-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 SYN_00645 a9ab35db8a2dbb67e732d9d29766bf96 284 SUPERFAMILY SSF57783 37 116 2.55E-7 T 11-10-2018 SYN_02756 024b65daef704d5c0bd76f9c9adca3dc 683 TIGRFAM TIGR02688 TIGR02688: TIGR02688 family protein 14 462 9.6E-134 T 11-10-2018 IPR014061 Conserved hypothetical protein CHP02688 SYN_02756 024b65daef704d5c0bd76f9c9adca3dc 683 SUPERFAMILY SSF54211 504 677 2.2E-21 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold SYN_02756 024b65daef704d5c0bd76f9c9adca3dc 683 Pfam PF13337 Putative ATP-dependent Lon protease 14 474 1.1E-178 T 11-10-2018 IPR014061 Conserved hypothetical protein CHP02688 SYN_02756 024b65daef704d5c0bd76f9c9adca3dc 683 TIGRFAM TIGR02653 Lon_rel_chp: conserved hypothetical protein 6 681 3.3E-191 T 11-10-2018 IPR013473 Conserved hypothetical protein CHP02653, peptidase S16 non-peptidase homologue SYN_02756 024b65daef704d5c0bd76f9c9adca3dc 683 Gene3D G3DSA:3.30.230.10 502 681 4.4E-11 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SYN_02159 434b8d590e442e4fc133ab7ccaf5f5c3 157 Gene3D G3DSA:2.60.40.10 46 156 7.2E-6 T 11-10-2018 IPR013783 Immunoglobulin-like fold SYN_00967 eb92289c9414366115e12a6e3729053f 145 Gene3D G3DSA:3.40.50.2300 3 134 1.7E-33 T 11-10-2018 SYN_00967 eb92289c9414366115e12a6e3729053f 145 Pfam PF00072 Response regulator receiver domain 7 121 4.1E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00967 eb92289c9414366115e12a6e3729053f 145 SUPERFAMILY SSF52172 5 126 4.27E-33 T 11-10-2018 IPR011006 CheY-like superfamily SYN_00967 eb92289c9414366115e12a6e3729053f 145 SMART SM00448 5 121 1.7E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_03543 cacfb19030750c6b66a23e2e1ac699a2 164 Pfam PF01230 HIT domain 17 147 6.4E-13 T 11-10-2018 IPR001310 Histidine triad (HIT) protein SYN_03543 cacfb19030750c6b66a23e2e1ac699a2 164 SUPERFAMILY SSF54197 5 151 6.01E-23 T 11-10-2018 IPR036265 HIT-like superfamily SYN_00284 704ca0c57dd7d4c5ba983f455f28d4ff 787 Pfam PF02687 FtsX-like permease family 294 389 5.9E-7 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 SYN_00284 704ca0c57dd7d4c5ba983f455f28d4ff 787 Pfam PF02687 FtsX-like permease family 687 770 2.5E-7 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 SYN_01545 8bf41294456bc9cdcf305b6cffefd312 265 SUPERFAMILY SSF51556 1 262 1.24E-39 T 11-10-2018 IPR032466 Metal-dependent hydrolase SYN_01545 8bf41294456bc9cdcf305b6cffefd312 265 Gene3D G3DSA:3.20.20.140 2 264 1.9E-44 T 11-10-2018 SYN_01545 8bf41294456bc9cdcf305b6cffefd312 265 Pfam PF04909 Amidohydrolase 90 262 2.5E-22 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 SYN_02140 ac06436ee73971d1714352a45dc7da66 411 Gene3D G3DSA:1.20.1250.20 1 410 1.5E-42 T 11-10-2018 SYN_02140 ac06436ee73971d1714352a45dc7da66 411 SUPERFAMILY SSF103473 9 407 2.09E-46 T 11-10-2018 IPR036259 MFS transporter superfamily SYN_02140 ac06436ee73971d1714352a45dc7da66 411 Pfam PF07690 Major Facilitator Superfamily 26 375 5.5E-28 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SYN_01952 7889624e61c140bab02a45e18929c900 273 Pfam PF04493 Endonuclease V 43 234 6.2E-74 T 11-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 SYN_01952 7889624e61c140bab02a45e18929c900 273 Gene3D G3DSA:3.30.2170.10 19 246 3.1E-82 T 11-10-2018 SYN_01952 7889624e61c140bab02a45e18929c900 273 Hamap MF_00801 Endonuclease V [nfi]. 30 244 34.031 T 11-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 SYN_00962 c1f5ffb0318457d397de9320721ad781 126 SUPERFAMILY SSF52172 4 124 3.13E-37 T 11-10-2018 IPR011006 CheY-like superfamily SYN_00962 c1f5ffb0318457d397de9320721ad781 126 Gene3D G3DSA:3.40.50.2300 1 125 3.8E-38 T 11-10-2018 SYN_00962 c1f5ffb0318457d397de9320721ad781 126 SMART SM00448 5 119 1.4E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_00962 c1f5ffb0318457d397de9320721ad781 126 Pfam PF00072 Response regulator receiver domain 7 119 6.5E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 SYN_01806 048223f785683f3ba9e7f1470192d7e2 362 Pfam PF10776 Protein of unknown function (DUF2600) 20 348 1.1E-146 T 11-10-2018 IPR019712 Protein of unknown function DUF2600 SYN_01874 ee4a528a3ad1153f7a79136d429b9520 488 Pfam PF06122 Conjugative relaxosome accessory transposon protein 32 384 7.5E-92 T 11-10-2018 IPR010927 Type IV conjugative transfer system protein TraH SYN_00150 f2c8e57ea477eb751c817db489a5c1da 282 Pfam PF01578 Cytochrome C assembly protein 68 277 9.1E-52 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 SYN_00150 f2c8e57ea477eb751c817db489a5c1da 282 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 40 279 7.5E-85 T 11-10-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 SYN_03206 cabb0cf55a5c1daf2f821ebb2d97ec3b 266 SUPERFAMILY SSF52540 13 240 4.13E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_03206 cabb0cf55a5c1daf2f821ebb2d97ec3b 266 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_03206 cabb0cf55a5c1daf2f821ebb2d97ec3b 266 Gene3D G3DSA:3.40.50.300 11 266 6.7E-52 T 11-10-2018 SYN_03206 cabb0cf55a5c1daf2f821ebb2d97ec3b 266 Pfam PF00005 ABC transporter 39 179 2.0E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_03206 cabb0cf55a5c1daf2f821ebb2d97ec3b 266 SMART SM00382 47 235 8.4E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01663 b12451d21683311a982fea4c377f6d0d 350 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 22 342 4.3E-103 T 11-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 SYN_01663 b12451d21683311a982fea4c377f6d0d 350 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 17 345 23.908 T 11-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 SYN_01663 b12451d21683311a982fea4c377f6d0d 350 Pfam PF03116 NQR2, RnfD, RnfE family 19 342 7.2E-110 T 11-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 SYN_00642 fc483c0241de5b1ef22b0839abc17014 323 Pfam PF09991 Predicted membrane protein (DUF2232) 19 307 3.1E-72 T 11-10-2018 IPR018710 Protein of unknown function DUF2232 SYN_02810 caf3f061b08adbdf3f53128d7f554d5f 79 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 63 2.7E-27 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 SYN_02810 caf3f061b08adbdf3f53128d7f554d5f 79 Gene3D G3DSA:3.30.70.1680 1 62 2.3E-26 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 SYN_02810 caf3f061b08adbdf3f53128d7f554d5f 79 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 49 5.0E-13 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 SYN_02810 caf3f061b08adbdf3f53128d7f554d5f 79 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 71 17.449 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 SYN_02810 caf3f061b08adbdf3f53128d7f554d5f 79 Pfam PF02599 Global regulator protein family 1 52 3.6E-24 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 SYN_02810 caf3f061b08adbdf3f53128d7f554d5f 79 SUPERFAMILY SSF117130 1 55 1.83E-19 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 SYN_02609 cbce3a64eac769f1c68b395522e15071 700 Pfam PF13380 CoA binding domain 8 134 4.5E-19 T 11-10-2018 IPR003781 CoA-binding GO:0048037 SYN_02609 cbce3a64eac769f1c68b395522e15071 700 Gene3D G3DSA:3.30.1490.20 500 575 6.2E-63 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 SYN_02609 cbce3a64eac769f1c68b395522e15071 700 SMART SM00881 4 99 1.9E-24 T 11-10-2018 IPR003781 CoA-binding GO:0048037 SYN_02609 cbce3a64eac769f1c68b395522e15071 700 Gene3D G3DSA:3.40.50.720 1 129 8.4E-32 T 11-10-2018 SYN_02609 cbce3a64eac769f1c68b395522e15071 700 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 154 287 2.2E-37 T 11-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain SYN_02609 cbce3a64eac769f1c68b395522e15071 700 SUPERFAMILY SSF51735 2 139 4.92E-29 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_02609 cbce3a64eac769f1c68b395522e15071 700 SUPERFAMILY SSF56059 488 695 1.13E-26 T 11-10-2018 SYN_02609 cbce3a64eac769f1c68b395522e15071 700 SUPERFAMILY SSF52210 132 288 8.37E-31 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_02609 cbce3a64eac769f1c68b395522e15071 700 SUPERFAMILY SSF52210 294 450 2.62E-18 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_02609 cbce3a64eac769f1c68b395522e15071 700 Gene3D G3DSA:3.40.50.261 291 453 3.7E-25 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_02609 cbce3a64eac769f1c68b395522e15071 700 Gene3D G3DSA:3.30.470.20 485 691 6.2E-63 T 11-10-2018 SYN_02609 cbce3a64eac769f1c68b395522e15071 700 Gene3D G3DSA:3.40.50.261 131 290 5.5E-38 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 SYN_02609 cbce3a64eac769f1c68b395522e15071 700 Pfam PF13549 ATP-grasp domain 480 692 2.6E-55 T 11-10-2018 SYN_01771 e23a983ac448b69e938b7923bbe75e6b 151 Pfam PF11006 Protein of unknown function (DUF2845) 43 147 1.7E-31 T 11-10-2018 IPR021268 Protein of unknown function DUF2845 SYN_01869 1b7486f25fed958b827d2a3352f0207f 339 Pfam PF06834 TraU protein 41 338 2.6E-109 T 11-10-2018 IPR009649 TraU SYN_00440 97ff6a28ef5c896176813a57a1a6bf4d 259 Pfam PF05690 Thiazole biosynthesis protein ThiG 7 250 3.8E-99 T 11-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 SYN_00440 97ff6a28ef5c896176813a57a1a6bf4d 259 Gene3D G3DSA:3.20.20.70 1 256 5.1E-100 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_00440 97ff6a28ef5c896176813a57a1a6bf4d 259 SUPERFAMILY SSF110399 4 238 7.72E-76 T 11-10-2018 SYN_00440 97ff6a28ef5c896176813a57a1a6bf4d 259 Hamap MF_00443 Thiazole synthase [thiG]. 5 256 38.616 T 11-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 SYN_01213 f9d41b8395bde3bb7436e0f4c273ef72 323 Gene3D G3DSA:3.40.1160.10 4 316 2.4E-115 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily SYN_01213 f9d41b8395bde3bb7436e0f4c273ef72 323 SUPERFAMILY SSF53633 10 314 2.49E-73 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily SYN_01213 f9d41b8395bde3bb7436e0f4c273ef72 323 ProSitePatterns PS01128 Shikimate kinase signature. 173 198 - T 11-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 SYN_01213 f9d41b8395bde3bb7436e0f4c273ef72 323 Pfam PF00696 Amino acid kinase family 9 297 2.5E-28 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 SYN_01213 f9d41b8395bde3bb7436e0f4c273ef72 323 PIRSF PIRSF000723 5 316 3.0E-117 T 11-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 SYN_01213 f9d41b8395bde3bb7436e0f4c273ef72 323 PRINTS PR01469 Bacterial carbamate kinase signature 48 67 1.8E-58 T 11-10-2018 SYN_01213 f9d41b8395bde3bb7436e0f4c273ef72 323 PRINTS PR01469 Bacterial carbamate kinase signature 114 133 1.8E-58 T 11-10-2018 SYN_01213 f9d41b8395bde3bb7436e0f4c273ef72 323 PRINTS PR01469 Bacterial carbamate kinase signature 216 231 1.8E-58 T 11-10-2018 SYN_01213 f9d41b8395bde3bb7436e0f4c273ef72 323 PRINTS PR01469 Bacterial carbamate kinase signature 162 181 1.8E-58 T 11-10-2018 SYN_01213 f9d41b8395bde3bb7436e0f4c273ef72 323 PRINTS PR01469 Bacterial carbamate kinase signature 185 203 1.8E-58 T 11-10-2018 SYN_01213 f9d41b8395bde3bb7436e0f4c273ef72 323 PRINTS PR01469 Bacterial carbamate kinase signature 79 97 1.8E-58 T 11-10-2018 SYN_01213 f9d41b8395bde3bb7436e0f4c273ef72 323 PRINTS PR01469 Bacterial carbamate kinase signature 271 286 1.8E-58 T 11-10-2018 SYN_00854 b7a994fc1fa2b48a95e4e155bd2670e1 401 Pfam PF02687 FtsX-like permease family 308 394 2.2E-8 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 SYN_00854 b7a994fc1fa2b48a95e4e155bd2670e1 401 Pfam PF12704 MacB-like periplasmic core domain 20 240 1.7E-43 T 11-10-2018 IPR025857 MacB-like periplasmic core domain SYN_02386 c8cc28492f10a6a902af64933e13a0c6 103 Pfam PF13453 Transcription factor zinc-finger 20 60 3.1E-21 T 11-10-2018 IPR027392 Transcription factor zinc-finger SYN_01775 75c4789b0b94d3be8a4f928f1880b13c 183 Pfam PF05137 Fimbrial assembly protein (PilN) 101 177 9.1E-17 T 11-10-2018 IPR007813 Fimbrial assembly PilN SYN_00581 56b222556a3e9c38acf296679feed5a1 136 SUPERFAMILY SSF75620 15 109 4.45E-27 T 11-10-2018 SYN_00581 56b222556a3e9c38acf296679feed5a1 136 Gene3D G3DSA:3.30.160.20 1 91 1.4E-30 T 11-10-2018 SYN_00581 56b222556a3e9c38acf296679feed5a1 136 Pfam PF00472 RF-1 domain 18 128 1.8E-26 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SYN_00822 d0aa2192d76bf01915b8494255678e45 263 SUPERFAMILY SSF53448 2 211 1.43E-48 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_00822 d0aa2192d76bf01915b8494255678e45 263 Gene3D G3DSA:3.90.550.10 1 252 3.4E-48 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_00822 d0aa2192d76bf01915b8494255678e45 263 Pfam PF00535 Glycosyl transferase family 2 3 116 1.1E-23 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 SYN_01055 fbcb079e1a56f2c579013b25e071365c 337 Pfam PF01032 FecCD transport family 13 331 1.9E-75 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 SYN_01055 fbcb079e1a56f2c579013b25e071365c 337 Gene3D G3DSA:1.10.3470.10 2 336 3.3E-90 T 11-10-2018 IPR037294 ABC transporter, BtuC-like SYN_01055 fbcb079e1a56f2c579013b25e071365c 337 SUPERFAMILY SSF81345 4 331 3.4E-72 T 11-10-2018 IPR037294 ABC transporter, BtuC-like SYN_03236 4985ab73a5e9ccbcec643a817c06680d 219 SUPERFAMILY SSF102114 80 200 1.31E-6 T 11-10-2018 SYN_03236 4985ab73a5e9ccbcec643a817c06680d 219 Gene3D G3DSA:3.20.20.70 75 214 3.0E-6 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_02648 c7131d63aa37add2a6933046b4ef5293 374 Pfam PF16363 GDP-mannose 4,6 dehydratase 23 336 3.0E-31 T 11-10-2018 IPR016040 NAD(P)-binding domain SYN_02648 c7131d63aa37add2a6933046b4ef5293 374 Gene3D G3DSA:3.90.25.10 204 370 7.3E-62 T 11-10-2018 SYN_02648 c7131d63aa37add2a6933046b4ef5293 374 SUPERFAMILY SSF51735 19 353 8.86E-67 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily SYN_02648 c7131d63aa37add2a6933046b4ef5293 374 Gene3D G3DSA:3.40.50.720 12 203 4.9E-50 T 11-10-2018 SYN_02648 c7131d63aa37add2a6933046b4ef5293 374 TIGRFAM TIGR02622 CDP_4_6_dhtase: CDP-glucose 4,6-dehydratase 16 366 4.2E-145 T 11-10-2018 IPR013445 CDP-glucose 4,6-dehydratase KEGG: 00520+4.2.1.45|MetaCyc: PWY-5833 SYN_01877 5047cfedee4d9dd7d01c295fb7ebccf2 290 Pfam PF13338 Transcriptional regulator, AbiEi antitoxin 34 85 1.4E-8 T 11-10-2018 IPR025159 Transcriptional regulator, AbiEi antitoxin SYN_02297 7556a547a54472392548cc649ec60b3b 68 SUPERFAMILY SSF160059 9 36 4.84E-5 T 11-10-2018 SYN_02814 c1d1fa4073b439887d05e1f7a73579ec 103 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 96 3.1E-15 T 11-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 SYN_02814 c1d1fa4073b439887d05e1f7a73579ec 103 Pfam PF04316 Anti-sigma-28 factor, FlgM 42 94 2.6E-17 T 11-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal SYN_02814 c1d1fa4073b439887d05e1f7a73579ec 103 SUPERFAMILY SSF101498 29 95 2.75E-13 T 11-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily SYN_00469 2236aeb88693b48bf721ee673220311f 182 SUPERFAMILY SSF57802 148 181 4.32E-9 T 11-10-2018 SYN_00469 2236aeb88693b48bf721ee673220311f 182 SUPERFAMILY SSF47240 19 142 1.63E-36 T 11-10-2018 IPR009078 Ferritin-like superfamily SYN_00469 2236aeb88693b48bf721ee673220311f 182 Pfam PF02915 Rubrerythrin 23 137 6.0E-22 T 11-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 SYN_00469 2236aeb88693b48bf721ee673220311f 182 Gene3D G3DSA:1.20.1260.10 18 145 7.8E-46 T 11-10-2018 IPR012347 Ferritin-like SYN_00469 2236aeb88693b48bf721ee673220311f 182 Gene3D G3DSA:2.20.28.10 146 182 8.1E-12 T 11-10-2018 SYN_00956 0502ecde39aa7dc8af6de4382fc857df 274 Pfam PF00950 ABC 3 transport family 9 264 1.8E-66 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 SYN_00956 0502ecde39aa7dc8af6de4382fc857df 274 SUPERFAMILY SSF81345 5 260 1.05E-33 T 11-10-2018 IPR037294 ABC transporter, BtuC-like SYN_00537 a07173e5f634abaff9065aad2330be0b 268 Gene3D G3DSA:3.10.310.50 30 176 8.7E-44 T 11-10-2018 SYN_00537 a07173e5f634abaff9065aad2330be0b 268 Pfam PF04536 TPM domain 45 166 2.3E-34 T 11-10-2018 IPR007621 TPM domain SYN_02706 4f5525cb760e4f1d5b0083cf00a2c16b 101 Hamap MF_00262 Cell division topological specificity factor [minE]. 11 94 18.28 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 SYN_02706 4f5525cb760e4f1d5b0083cf00a2c16b 101 SUPERFAMILY SSF55229 45 92 3.53E-12 T 11-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 SYN_02706 4f5525cb760e4f1d5b0083cf00a2c16b 101 Gene3D G3DSA:3.30.1070.10 6 93 1.1E-25 T 11-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 SYN_02706 4f5525cb760e4f1d5b0083cf00a2c16b 101 Pfam PF03776 Septum formation topological specificity factor MinE 23 91 8.0E-23 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 SYN_02706 4f5525cb760e4f1d5b0083cf00a2c16b 101 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 9 92 2.3E-26 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 SYN_02845 9ca68ddcec17572ae332427885317db0 187 Pfam PF03830 PTS system sorbose subfamily IIB component 28 174 4.1E-39 T 11-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 SYN_02845 9ca68ddcec17572ae332427885317db0 187 Gene3D G3DSA:3.40.35.10 26 186 2.8E-42 T 11-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 SYN_02845 9ca68ddcec17572ae332427885317db0 187 SUPERFAMILY SSF52728 27 183 1.02E-38 T 11-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 SYN_01819 124f47bd3a33c450807f26cf29f44e13 481 Pfam PF11855 Protein of unknown function (DUF3375) 11 478 1.3E-162 T 11-10-2018 IPR021804 Protein of unknown function DUF3375 SYN_02998 3ee8c72bcb39f3101ab3631589caeb32 149 Pfam PF13279 Thioesterase-like superfamily 21 137 5.4E-14 T 11-10-2018 SYN_02998 3ee8c72bcb39f3101ab3631589caeb32 149 SUPERFAMILY SSF54637 8 141 1.49E-28 T 11-10-2018 IPR029069 HotDog domain superfamily SYN_02998 3ee8c72bcb39f3101ab3631589caeb32 149 Gene3D G3DSA:3.10.129.10 3 142 1.1E-27 T 11-10-2018 SYN_02280 82c3370f3f22ccb28f12534b6f7f2638 157 Pfam PF06271 RDD family 6 139 1.4E-28 T 11-10-2018 IPR010432 RDD SYN_02545 08f9ee6a3b01ecb470a41d24adde7b16 224 Gene3D G3DSA:1.20.58.220 28 224 7.8E-64 T 11-10-2018 IPR038078 PhoU-like domain superfamily SYN_02545 08f9ee6a3b01ecb470a41d24adde7b16 224 Pfam PF01865 Protein of unknown function DUF47 23 221 4.1E-23 T 11-10-2018 IPR018445 Putative phosphate transport regulator SYN_00693 74cfe8def339f2faabc5964d5fdf0e4b 175 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 10 170 1.4E-28 T 11-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SYN_00693 74cfe8def339f2faabc5964d5fdf0e4b 175 SUPERFAMILY SSF53323 1 174 3.01E-39 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 SYN_00693 74cfe8def339f2faabc5964d5fdf0e4b 175 Gene3D G3DSA:3.40.920.10 1 175 3.0E-49 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 SYN_00693 74cfe8def339f2faabc5964d5fdf0e4b 175 TIGRFAM TIGR02175 PorC_KorC: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family 1 174 2.8E-48 T 11-10-2018 IPR011894 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate GO:0016625|GO:0055114 SYN_01623 02add2582fe6d800e9c5da7c9ef9f5ee 240 SUPERFAMILY SSF51556 3 235 3.8E-28 T 11-10-2018 IPR032466 Metal-dependent hydrolase SYN_01623 02add2582fe6d800e9c5da7c9ef9f5ee 240 Gene3D G3DSA:3.20.20.140 3 238 3.2E-31 T 11-10-2018 SYN_01623 02add2582fe6d800e9c5da7c9ef9f5ee 240 Pfam PF04909 Amidohydrolase 137 234 3.5E-11 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 SYN_01426 a2258815152f3b6151a253e09d0c2d94 278 Pfam PF00005 ABC transporter 21 170 3.5E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SYN_01426 a2258815152f3b6151a253e09d0c2d94 278 SMART SM00382 30 227 6.7E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain SYN_01426 a2258815152f3b6151a253e09d0c2d94 278 Gene3D G3DSA:3.40.50.300 1 258 6.3E-73 T 11-10-2018 SYN_01426 a2258815152f3b6151a253e09d0c2d94 278 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SYN_01426 a2258815152f3b6151a253e09d0c2d94 278 SUPERFAMILY SSF52540 3 237 5.42E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01204 921df7f488bfa219da8a4d93919c6daa 525 Pfam PF02706 Chain length determinant protein 9 91 4.7E-7 T 11-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 SYN_00137 1558e5b555aad0e4b018a940320fb78b 67 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 3 56 22.52 T 11-10-2018 IPR038053 Uncharacterised protein family UPF0434 SYN_00137 1558e5b555aad0e4b018a940320fb78b 67 SUPERFAMILY SSF158997 1 57 1.83E-18 T 11-10-2018 SYN_00137 1558e5b555aad0e4b018a940320fb78b 67 Gene3D G3DSA:2.20.25.10 10 63 3.4E-19 T 11-10-2018 SYN_00137 1558e5b555aad0e4b018a940320fb78b 67 Pfam PF03966 Trm112p-like protein 5 43 5.0E-8 T 11-10-2018 IPR005651 Trm112-like SYN_01140 c4daf857ff52ac0b38c20b939e233e02 196 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 131 159 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 SYN_01140 c4daf857ff52ac0b38c20b939e233e02 196 SUPERFAMILY SSF51161 31 187 3.88E-38 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily SYN_01140 c4daf857ff52ac0b38c20b939e233e02 196 Gene3D G3DSA:2.160.10.10 22 192 2.8E-42 T 11-10-2018 SYN_01140 c4daf857ff52ac0b38c20b939e233e02 196 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 123 157 3.0E-8 T 11-10-2018 IPR001451 Hexapeptide repeat SYN_02494 456757130246a20e490afe2e5f54b555 113 Pfam PF07311 Dodecin 48 111 4.5E-31 T 11-10-2018 IPR009923 Dodecin SYN_02494 456757130246a20e490afe2e5f54b555 113 Gene3D G3DSA:3.30.1660.10 44 113 3.7E-34 T 11-10-2018 IPR025543 Dodecin-like SYN_02494 456757130246a20e490afe2e5f54b555 113 SUPERFAMILY SSF89807 47 111 2.88E-26 T 11-10-2018 IPR036694 Dodecin-like superfamily SYN_01423 b642562a42a6c1b626a0fc5d7dea0309 313 Pfam PF01497 Periplasmic binding protein 51 277 5.0E-38 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain SYN_01423 b642562a42a6c1b626a0fc5d7dea0309 313 Gene3D G3DSA:3.40.50.1980 170 299 1.9E-37 T 11-10-2018 SYN_01423 b642562a42a6c1b626a0fc5d7dea0309 313 SUPERFAMILY SSF53807 29 299 1.02E-68 T 11-10-2018 SYN_01423 b642562a42a6c1b626a0fc5d7dea0309 313 Gene3D G3DSA:3.40.50.1980 44 167 1.1E-37 T 11-10-2018 SYN_03376 7273240bf4e447bdf5d8725ac1cd6dd5 146 Pfam PF07087 Protein of unknown function (DUF1353) 27 96 1.5E-6 T 11-10-2018 IPR010767 Campylobacter phage CGC-2007, Cje0229 SYN_02072 815ad54ec872e27640ddc0838f3a9591 163 Pfam PF00293 NUDIX domain 21 133 2.8E-9 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 SYN_02072 815ad54ec872e27640ddc0838f3a9591 163 SUPERFAMILY SSF55811 9 143 1.9E-20 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 SYN_02072 815ad54ec872e27640ddc0838f3a9591 163 Gene3D G3DSA:3.90.79.10 6 150 2.7E-21 T 11-10-2018 SYN_02629 413e8102795377b634bffb377c0e899b 308 SUPERFAMILY SSF50182 119 177 1.34E-10 T 11-10-2018 IPR010920 LSM domain superfamily SYN_02629 413e8102795377b634bffb377c0e899b 308 SUPERFAMILY SSF82861 24 117 9.29E-13 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SYN_02629 413e8102795377b634bffb377c0e899b 308 SUPERFAMILY SSF82689 183 286 2.48E-22 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SYN_02629 413e8102795377b634bffb377c0e899b 308 Pfam PF00924 Mechanosensitive ion channel 76 276 1.8E-36 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SYN_02629 413e8102795377b634bffb377c0e899b 308 Gene3D G3DSA:2.30.30.60 134 183 4.6E-14 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily SYN_02629 413e8102795377b634bffb377c0e899b 308 Gene3D G3DSA:3.30.70.100 187 274 5.2E-26 T 11-10-2018 SYN_02755 42f07b42135b61576ad845c539dd64be 413 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 321 406 1.2E-18 T 11-10-2018 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain SYN_02755 42f07b42135b61576ad845c539dd64be 413 Pfam PF04326 Putative DNA-binding domain 14 128 9.6E-20 T 11-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 SYN_02755 42f07b42135b61576ad845c539dd64be 413 Gene3D G3DSA:3.30.950.30 3 137 2.1E-26 T 11-10-2018 IPR038461 Schlafen, AAA domain superfamily SYN_02755 42f07b42135b61576ad845c539dd64be 413 Gene3D G3DSA:3.30.565.60 253 409 8.0E-33 T 11-10-2018 IPR038475 RecG, C-terminal domain superfamily SYN_00737 b7c10cfe5174ca14842ce76bf113a29a 171 PIRSF PIRSF004982 6 162 3.2E-44 T 11-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 SYN_00737 b7c10cfe5174ca14842ce76bf113a29a 171 Pfam PF03843 Outer membrane lipoprotein Slp family 22 152 7.7E-37 T 11-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 SYN_01565 e985429a409e6b01dbb325a0c9dc1b3e 383 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 3 378 34.924 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 SYN_01565 e985429a409e6b01dbb325a0c9dc1b3e 383 Pfam PF02684 Lipid-A-disaccharide synthetase 6 359 5.9E-100 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 SYN_01565 e985429a409e6b01dbb325a0c9dc1b3e 383 SUPERFAMILY SSF53756 6 369 3.85E-37 T 11-10-2018 SYN_01565 e985429a409e6b01dbb325a0c9dc1b3e 383 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 5 375 9.5E-99 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 SYN_01487 6a7a6fdd830a2275625e133b587aefce 166 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 40 83 2.7E-10 T 11-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger SYN_00867 b6f3eb56c3abeb9192996d1b6760f3cc 403 SUPERFAMILY SSF53448 39 402 7.87E-65 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_00867 b6f3eb56c3abeb9192996d1b6760f3cc 403 Gene3D G3DSA:3.90.550.10 80 329 4.5E-37 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_00359 5e7fe13dedda22c152a4917b84e96e5d 195 TIGRFAM TIGR00498 lexA: repressor LexA 15 193 3.7E-34 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 SYN_00359 5e7fe13dedda22c152a4917b84e96e5d 195 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 147 159 2.8E-8 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 SYN_00359 5e7fe13dedda22c152a4917b84e96e5d 195 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 108 118 2.8E-8 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 SYN_00359 5e7fe13dedda22c152a4917b84e96e5d 195 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 119 130 2.8E-8 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 SYN_00359 5e7fe13dedda22c152a4917b84e96e5d 195 Gene3D G3DSA:2.10.109.10 76 194 2.0E-37 T 11-10-2018 SYN_00359 5e7fe13dedda22c152a4917b84e96e5d 195 SUPERFAMILY SSF51306 70 191 1.44E-33 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily SYN_00359 5e7fe13dedda22c152a4917b84e96e5d 195 Pfam PF00717 Peptidase S24-like 111 174 7.8E-16 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C SYN_00319 08b86b7ea69e82ed08e52eb8f97154e3 263 Gene3D G3DSA:1.10.260.40 2 98 1.6E-17 T 11-10-2018 SYN_00319 08b86b7ea69e82ed08e52eb8f97154e3 263 SUPERFAMILY SSF47413 3 47 2.41E-5 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 SYN_00319 08b86b7ea69e82ed08e52eb8f97154e3 263 Pfam PF13413 Helix-turn-helix domain 14 71 1.3E-14 T 11-10-2018 SYN_02510 ceda7b48cedfa99b73ec167579b63582 412 SMART SM00331 177 405 2.6E-29 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 SYN_02510 ceda7b48cedfa99b73ec167579b63582 412 Gene3D G3DSA:3.60.40.10 140 405 1.8E-58 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 SYN_02510 ceda7b48cedfa99b73ec167579b63582 412 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 204 405 7.4E-37 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 SYN_00095 743ff328803a1a362e2d41d97c96221b 242 SUPERFAMILY SSF56507 66 237 5.36E-24 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 SYN_00095 743ff328803a1a362e2d41d97c96221b 242 PIRSF PIRSF037984 35 242 2.9E-77 T 11-10-2018 IPR017342 S-adenosyl-L-methionine dependent methionine synthase, predicted SYN_00095 743ff328803a1a362e2d41d97c96221b 242 Gene3D G3DSA:3.40.109.40 30 241 1.9E-41 T 11-10-2018 SYN_00726 bfd03bb6b3ba76f987e2dabab8ab70c2 160 PRINTS PR01438 Universal stress protein signature 137 159 2.7E-6 T 11-10-2018 IPR006015 Universal stress protein A SYN_00726 bfd03bb6b3ba76f987e2dabab8ab70c2 160 PRINTS PR01438 Universal stress protein signature 119 131 2.7E-6 T 11-10-2018 IPR006015 Universal stress protein A SYN_00726 bfd03bb6b3ba76f987e2dabab8ab70c2 160 PRINTS PR01438 Universal stress protein signature 1 14 2.7E-6 T 11-10-2018 IPR006015 Universal stress protein A SYN_00726 bfd03bb6b3ba76f987e2dabab8ab70c2 160 Pfam PF00582 Universal stress protein family 1 149 3.4E-17 T 11-10-2018 IPR006016 UspA SYN_00726 bfd03bb6b3ba76f987e2dabab8ab70c2 160 Gene3D G3DSA:3.40.50.620 1 160 7.2E-25 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SYN_00726 bfd03bb6b3ba76f987e2dabab8ab70c2 160 SUPERFAMILY SSF52402 1 150 5.94E-21 T 11-10-2018 SYN_01467 6fbace25ce1a457c1641200feaae3526 128 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 125 4.7E-26 T 11-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 SYN_01467 6fbace25ce1a457c1641200feaae3526 128 PIRSF PIRSF002889 1 127 1.1E-23 T 11-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 SYN_00352 8337aeabd790391d5544f928a995fa19 132 Pfam PF13187 4Fe-4S dicluster domain 44 89 2.4E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SYN_00352 8337aeabd790391d5544f928a995fa19 132 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 45 56 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_00352 8337aeabd790391d5544f928a995fa19 132 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SYN_00352 8337aeabd790391d5544f928a995fa19 132 Gene3D G3DSA:3.30.70.20 62 94 1.8E-6 T 11-10-2018 SYN_00352 8337aeabd790391d5544f928a995fa19 132 Gene3D G3DSA:3.30.70.20 21 61 2.7E-7 T 11-10-2018 SYN_00352 8337aeabd790391d5544f928a995fa19 132 SUPERFAMILY SSF54862 28 93 4.33E-17 T 11-10-2018 SYN_01671 bca558a3c57387bfe908e099930a84b9 165 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 40 126 6.6E-11 T 11-10-2018 SYN_00807 e2b567c728fc7aab36b5ad83b706131c 100 Pfam PF08734 GYD domain 4 93 2.0E-23 T 11-10-2018 IPR014845 Protein GYD/TTHA1554 SYN_00129 0479da0842099c98ce6c4a60e5e7e0a5 320 Pfam PF06258 Mitochondrial fission ELM1 16 314 3.3E-65 T 11-10-2018 IPR009367 Mitochondrial fission protein ELM1-like SYN_02747 5ddf41f3d4d9bcd624cbc8cf735ab4b6 186 Pfam PF08747 Domain of unknown function (DUF1788) 87 169 3.6E-9 T 11-10-2018 IPR014858 Protein of unknown function DUF1788 SYN_01021 cc8faeb117465eb2d4d9778630bdd397 218 Gene3D G3DSA:2.40.440.10 47 218 1.8E-28 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like SYN_01021 cc8faeb117465eb2d4d9778630bdd397 218 Pfam PF03734 L,D-transpeptidase catalytic domain 72 216 4.9E-11 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 SYN_01021 cc8faeb117465eb2d4d9778630bdd397 218 SUPERFAMILY SSF141523 70 217 1.57E-14 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like SYN_02963 9e7e9ba8716db6518f9744fb77907e3a 401 Pfam PF02073 Thermophilic metalloprotease (M29) 6 399 3.8E-105 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 SYN_02963 9e7e9ba8716db6518f9744fb77907e3a 401 SUPERFAMILY SSF144052 5 400 1.07E-94 T 11-10-2018 SYN_02963 9e7e9ba8716db6518f9744fb77907e3a 401 Gene3D G3DSA:3.40.1830.10 4 174 1.1E-8 T 11-10-2018 IPR035097 Peptidase M29, N-terminal SYN_01039 47b252f921e7a48e3d4d15d04987303f 81 Pfam PF16256 Domain of unknown function (DUF4911) 9 62 4.2E-15 T 11-10-2018 IPR032587 Protein of unknown function DUF4911 SYN_01834 7b4f42de515b22cb7a6c433efbee377d 80 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 4 51 3.2E-12 T 11-10-2018 IPR010260 DNA-binding transcriptional activator AlpA SYN_01341 d4290799f9afae288a4f13c7ab896fc5 324 Gene3D G3DSA:1.10.3720.10 89 314 3.6E-22 T 11-10-2018 IPR035906 MetI-like superfamily SYN_01341 d4290799f9afae288a4f13c7ab896fc5 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 322 5.8E-40 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 SYN_01341 d4290799f9afae288a4f13c7ab896fc5 324 SUPERFAMILY SSF161098 93 305 1.01E-17 T 11-10-2018 IPR035906 MetI-like superfamily SYN_00790 eb3c5c6f92987011ef5e64dd2ac6b5ce 448 Pfam PF01609 Transposase DDE domain 295 437 2.8E-9 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 SYN_00790 eb3c5c6f92987011ef5e64dd2ac6b5ce 448 Pfam PF05598 Transposase domain (DUF772) 54 125 2.1E-16 T 11-10-2018 IPR008490 Transposase InsH, N-terminal SYN_03135 eb3c5c6f92987011ef5e64dd2ac6b5ce 448 Pfam PF01609 Transposase DDE domain 295 437 2.8E-9 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 SYN_03135 eb3c5c6f92987011ef5e64dd2ac6b5ce 448 Pfam PF05598 Transposase domain (DUF772) 54 125 2.1E-16 T 11-10-2018 IPR008490 Transposase InsH, N-terminal SYN_02355 0543a4b4175db2fcd0c6844c03c698c3 223 Pfam PF00583 Acetyltransferase (GNAT) family 54 185 8.7E-11 T 11-10-2018 IPR000182 GNAT domain SYN_02355 0543a4b4175db2fcd0c6844c03c698c3 223 Gene3D G3DSA:3.40.630.30 8 193 6.1E-25 T 11-10-2018 SYN_02355 0543a4b4175db2fcd0c6844c03c698c3 223 SUPERFAMILY SSF55729 12 194 1.56E-24 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase SYN_03102 2d6d8e101e0254a09956d17f82e3bf4e 426 Pfam PF00872 Transposase, Mutator family 27 400 3.0E-68 T 11-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 SYN_00665 2d6d8e101e0254a09956d17f82e3bf4e 426 Pfam PF00872 Transposase, Mutator family 27 400 3.0E-68 T 11-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 SYN_01163 b90731ba0ff9bd45c90f48fd6dac9975 219 Gene3D G3DSA:3.40.50.150 12 218 2.8E-47 T 11-10-2018 SYN_01163 b90731ba0ff9bd45c90f48fd6dac9975 219 Pfam PF08241 Methyltransferase domain 52 135 1.4E-16 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 SYN_01163 b90731ba0ff9bd45c90f48fd6dac9975 219 SUPERFAMILY SSF53335 15 198 2.79E-29 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_01429 114c6f7f786304e96baa9775289f4004 102 SUPERFAMILY SSF54913 4 100 3.5E-5 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta SYN_01429 114c6f7f786304e96baa9775289f4004 102 Gene3D G3DSA:3.30.70.120 1 99 9.6E-9 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SYN_00624 194b0dac217f59a51b32db989d6ecb13 156 SUPERFAMILY SSF56784 14 138 2.82E-12 T 11-10-2018 IPR036412 HAD-like superfamily SYN_00624 194b0dac217f59a51b32db989d6ecb13 156 Pfam PF00702 haloacid dehalogenase-like hydrolase 19 109 7.4E-6 T 11-10-2018 SYN_00624 194b0dac217f59a51b32db989d6ecb13 156 Gene3D G3DSA:3.40.50.1000 11 156 6.2E-14 T 11-10-2018 IPR023214 HAD superfamily SYN_03092 120e3775bb33f630da163a0e9dbf3298 416 Pfam PF00872 Transposase, Mutator family 10 390 5.3E-68 T 11-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 SYN_01944 1988c4d0ab2689c5222d5d81e6aff837 276 SUPERFAMILY SSF51366 24 270 2.35E-86 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 SYN_01944 1988c4d0ab2689c5222d5d81e6aff837 276 Gene3D G3DSA:3.20.20.70 9 275 1.4E-101 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_01944 1988c4d0ab2689c5222d5d81e6aff837 276 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 15 270 34.886 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 SYN_01944 1988c4d0ab2689c5222d5d81e6aff837 276 Pfam PF00218 Indole-3-glycerol phosphate synthase 18 268 9.2E-86 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 SYN_00269 9b09adb447e8d50f8f240480deedd12a 254 SUPERFAMILY SSF53850 31 252 8.59E-64 T 11-10-2018 SYN_00269 9b09adb447e8d50f8f240480deedd12a 254 PIRSF PIRSF004846 2 254 2.2E-70 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 SYN_00269 9b09adb447e8d50f8f240480deedd12a 254 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 37 250 1.2E-57 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 SYN_00269 9b09adb447e8d50f8f240480deedd12a 254 Pfam PF13531 Bacterial extracellular solute-binding protein 34 251 1.1E-45 T 11-10-2018 SYN_00269 9b09adb447e8d50f8f240480deedd12a 254 Gene3D G3DSA:3.40.190.10 35 251 1.2E-65 T 11-10-2018 SYN_00269 9b09adb447e8d50f8f240480deedd12a 254 Gene3D G3DSA:3.40.190.10 111 214 1.2E-65 T 11-10-2018 SYN_01074 40380b1e0fcdee7ed55326a2158c0ab7 1591 Pfam PF04773 FecR protein 64 164 8.3E-12 T 11-10-2018 IPR006860 FecR protein SYN_00687 4525d4c6b7501357743fd9f1c0231efe 531 Pfam PF00128 Alpha amylase, catalytic domain 69 390 4.7E-52 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SYN_00687 4525d4c6b7501357743fd9f1c0231efe 531 SUPERFAMILY SSF51445 32 437 6.41E-83 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily SYN_00687 4525d4c6b7501357743fd9f1c0231efe 531 PRINTS PR00110 Alpha-amylase signature 227 238 4.6E-6 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 SYN_00687 4525d4c6b7501357743fd9f1c0231efe 531 PRINTS PR00110 Alpha-amylase signature 147 158 4.6E-6 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 SYN_00687 4525d4c6b7501357743fd9f1c0231efe 531 PRINTS PR00110 Alpha-amylase signature 326 338 4.6E-6 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 SYN_00687 4525d4c6b7501357743fd9f1c0231efe 531 Gene3D G3DSA:3.20.20.80 28 431 3.5E-97 T 11-10-2018 SYN_00687 4525d4c6b7501357743fd9f1c0231efe 531 SMART SM00642 38 428 1.5E-58 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SYN_01526 dfa7ba15f530a4bc5d0e1a881c793ba1 170 Pfam PF04306 Protein of unknown function (DUF456) 24 167 3.8E-28 T 11-10-2018 IPR007403 Protein of unknown function DUF456 SYN_02046 6c9919e8180435eb41a8c85789aa1b30 482 SUPERFAMILY SSF103365 8 482 1.2E-168 T 11-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 SYN_02046 6c9919e8180435eb41a8c85789aa1b30 482 ProSitePatterns PS01288 Uncharacterized protein family UPF0027 signature. 48 77 - T 11-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 SYN_02046 6c9919e8180435eb41a8c85789aa1b30 482 Gene3D G3DSA:3.90.1860.10 4 482 9.6E-194 T 11-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 SYN_02046 6c9919e8180435eb41a8c85789aa1b30 482 Pfam PF01139 tRNA-splicing ligase RtcB 48 482 4.6E-160 T 11-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 SYN_02872 0c30f7a3d70945370682c58ee5bdece5 524 Pfam PF12225 Methylene-tetrahydrofolate reductase C terminal 397 489 6.6E-28 T 11-10-2018 IPR022026 Methylene-tetrahydrofolate reductase C-terminal SYN_02872 0c30f7a3d70945370682c58ee5bdece5 524 Pfam PF02219 Methylenetetrahydrofolate reductase 16 259 1.8E-18 T 11-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 SYN_02872 0c30f7a3d70945370682c58ee5bdece5 524 Gene3D G3DSA:3.20.20.220 7 310 3.7E-39 T 11-10-2018 SYN_02872 0c30f7a3d70945370682c58ee5bdece5 524 SUPERFAMILY SSF51730 17 293 1.26E-45 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like SYN_02981 d635dc68973ac781278cd609b87a4b07 93 SUPERFAMILY SSF102829 6 91 3.66E-15 T 11-10-2018 IPR036192 Cell division protein ZapA-like superfamily SYN_02981 d635dc68973ac781278cd609b87a4b07 93 Pfam PF05164 Cell division protein ZapA 6 83 1.1E-16 T 11-10-2018 IPR007838 Cell division protein ZapA-like SYN_00712 73d154d42107db4130f21aabc06ffec7 238 PIRSF PIRSF020606 26 231 3.1E-59 T 11-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 SYN_00712 73d154d42107db4130f21aabc06ffec7 238 Pfam PF09997 Predicted membrane protein (DUF2238) 69 207 1.6E-44 T 11-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 SYN_02983 e8ce923d7628856f87161615cee3485e 39 Pfam PF00121 Triosephosphate isomerase 1 37 4.0E-11 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_02983 e8ce923d7628856f87161615cee3485e 39 Gene3D G3DSA:3.20.20.70 1 39 3.6E-14 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_02983 e8ce923d7628856f87161615cee3485e 39 SUPERFAMILY SSF51351 1 38 5.89E-13 T 11-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 SYN_00615 053f82215aa723054981f0470dc60083 174 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 72 103 4.0E-6 T 11-10-2018 IPR001451 Hexapeptide repeat SYN_00615 053f82215aa723054981f0470dc60083 174 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 11 45 1.3E-6 T 11-10-2018 IPR001451 Hexapeptide repeat SYN_00615 053f82215aa723054981f0470dc60083 174 SUPERFAMILY SSF51161 2 168 6.38E-45 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily SYN_00615 053f82215aa723054981f0470dc60083 174 Gene3D G3DSA:2.160.10.10 2 173 2.5E-52 T 11-10-2018 SYN_00862 451792fd56183267bb2498709ec3c21e 196 Pfam PF01814 Hemerythrin HHE cation binding domain 17 150 6.1E-18 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 SYN_00862 451792fd56183267bb2498709ec3c21e 196 Gene3D G3DSA:1.20.120.520 14 193 4.6E-36 T 11-10-2018 SYN_01828 fbafedaa25a72fc4e5cbf1b7da458e7c 69 Pfam PF12728 Helix-turn-helix domain 8 56 3.3E-15 T 11-10-2018 SYN_01828 fbafedaa25a72fc4e5cbf1b7da458e7c 69 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 8 56 2.4E-21 T 11-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 SYN_01828 fbafedaa25a72fc4e5cbf1b7da458e7c 69 SUPERFAMILY SSF46955 7 56 1.83E-10 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily SYN_01828 fbafedaa25a72fc4e5cbf1b7da458e7c 69 Gene3D G3DSA:1.10.1660.10 5 58 2.7E-11 T 11-10-2018 SYN_00658 e4ebe650ea7437367d1f894638a30aae 54 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 7 42 2.3E-7 T 11-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain SYN_00658 e4ebe650ea7437367d1f894638a30aae 54 SUPERFAMILY SSF100950 8 40 3.93E-5 T 11-10-2018 IPR037171 NagB/RpiA transferase-like SYN_00658 e4ebe650ea7437367d1f894638a30aae 54 Gene3D G3DSA:3.40.1080.20 5 52 5.9E-8 T 11-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily SYN_00331 54060acde44e2662c61090747b03b0e7 198 SUPERFAMILY SSF48150 7 190 3.98E-84 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 SYN_00331 54060acde44e2662c61090747b03b0e7 198 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 8 186 1.2E-77 T 11-10-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 SYN_00331 54060acde44e2662c61090747b03b0e7 198 Pfam PF03352 Methyladenine glycosylase 11 187 2.1E-83 T 11-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 SYN_00331 54060acde44e2662c61090747b03b0e7 198 Gene3D G3DSA:1.10.340.30 6 192 1.2E-87 T 11-10-2018 SYN_01516 05e3e040c13aa3d40cfd6d2b058f699e 163 Pfam PF14730 Domain of unknown function (DUF4468) with TBP-like fold 38 114 3.6E-6 T 11-10-2018 IPR027823 Domain of unknown function DUF4468 with TBP-like fold SYN_01443 787cfca511073ee84dfb2c6aa3d3a088 274 Gene3D G3DSA:3.40.50.300 1 188 1.7E-37 T 11-10-2018 SYN_01443 787cfca511073ee84dfb2c6aa3d3a088 274 SUPERFAMILY SSF52540 11 184 1.31E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01443 787cfca511073ee84dfb2c6aa3d3a088 274 Pfam PF13189 Cytidylate kinase-like family 3 169 7.7E-37 T 11-10-2018 SYN_02285 70e30b8ab5b2c08037c50ba3085f27a0 330 Pfam PF04865 Baseplate J-like protein 83 295 2.0E-27 T 11-10-2018 IPR006949 Baseplate protein J-like SYN_01427 464d0a0e315f978179d25bae70bea9a2 350 SUPERFAMILY SSF81345 14 342 5.62E-82 T 11-10-2018 IPR037294 ABC transporter, BtuC-like SYN_01427 464d0a0e315f978179d25bae70bea9a2 350 Pfam PF01032 FecCD transport family 26 342 1.4E-89 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 SYN_01427 464d0a0e315f978179d25bae70bea9a2 350 Gene3D G3DSA:1.10.3470.10 13 346 1.7E-97 T 11-10-2018 IPR037294 ABC transporter, BtuC-like SYN_01264 49b6e54a08ee2c9ef13152f88519bb4a 172 Pfam PF02470 MlaD protein 49 127 1.1E-20 T 11-10-2018 IPR003399 Mce/MlaD SYN_01264 49b6e54a08ee2c9ef13152f88519bb4a 172 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 15 157 5.3E-44 T 11-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 SYN_01342 5d1f9b3eb0fde2df8e3f8bf4457cbab5 278 Gene3D G3DSA:1.10.3720.10 65 276 7.9E-23 T 11-10-2018 IPR035906 MetI-like superfamily SYN_01342 5d1f9b3eb0fde2df8e3f8bf4457cbab5 278 SUPERFAMILY SSF161098 70 277 3.14E-29 T 11-10-2018 IPR035906 MetI-like superfamily SYN_01342 5d1f9b3eb0fde2df8e3f8bf4457cbab5 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 277 2.2E-30 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 SYN_01342 5d1f9b3eb0fde2df8e3f8bf4457cbab5 278 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 3 52 1.1E-12 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain SYN_01252 c5d55c8d2e1c96c8652c2f8b20e180ef 185 SUPERFAMILY SSF50800 41 184 8.89E-34 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily SYN_01252 c5d55c8d2e1c96c8652c2f8b20e180ef 185 Gene3D G3DSA:2.40.33.20 21 185 1.1E-31 T 11-10-2018 SYN_00227 bd4046b595dd9d9d2c2bac1034b1a5c3 104 Gene3D G3DSA:1.20.120.160 2 103 7.2E-15 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 SYN_00227 bd4046b595dd9d9d2c2bac1034b1a5c3 104 Pfam PF01627 Hpt domain 23 99 3.3E-7 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 SYN_00227 bd4046b595dd9d9d2c2bac1034b1a5c3 104 SUPERFAMILY SSF47226 14 98 2.75E-15 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 SYN_01085 1f82760f0dd1ed0da958529dbb1ddda8 191 Pfam PF07670 Nucleoside recognition 43 149 9.6E-11 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 SYN_00683 c47508cc5a1fa7be2178868a18e01b58 194 Gene3D G3DSA:3.10.180.10 1 131 2.1E-25 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SYN_00683 c47508cc5a1fa7be2178868a18e01b58 194 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 110 4.5E-13 T 11-10-2018 SYN_00683 c47508cc5a1fa7be2178868a18e01b58 194 SUPERFAMILY SSF54593 1 133 7.19E-24 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SYN_02887 ab2698e387e9ff280f88556896186aa6 440 Gene3D G3DSA:1.25.40.10 161 250 1.7E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_02887 ab2698e387e9ff280f88556896186aa6 440 Gene3D G3DSA:1.25.40.10 68 160 4.0E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_02887 ab2698e387e9ff280f88556896186aa6 440 SUPERFAMILY SSF48452 77 234 1.48E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_02887 ab2698e387e9ff280f88556896186aa6 440 Pfam PF00395 S-layer homology domain 339 355 0.014 T 11-10-2018 IPR001119 S-layer homology domain SYN_00366 ee3832e00d73acea30c66bbcf85aa9f3 280 Gene3D G3DSA:1.10.3720.10 55 272 5.1E-22 T 11-10-2018 IPR035906 MetI-like superfamily SYN_00366 ee3832e00d73acea30c66bbcf85aa9f3 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 271 1.8E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 SYN_00366 ee3832e00d73acea30c66bbcf85aa9f3 280 SUPERFAMILY SSF161098 60 265 4.32E-26 T 11-10-2018 IPR035906 MetI-like superfamily SYN_01503 6c5ae44133956c1c0421c3ebb0a5ccff 173 Pfam PF07811 TadE-like protein 25 67 1.4E-16 T 11-10-2018 IPR012495 TadE-like SYN_00657 4b669bf862aa4d45a3cbd33e6d0a66f0 265 SUPERFAMILY SSF52218 29 214 1.9E-27 T 11-10-2018 IPR029039 Flavoprotein-like superfamily SYN_00657 4b669bf862aa4d45a3cbd33e6d0a66f0 265 Pfam PF03358 NADPH-dependent FMN reductase 29 132 5.6E-19 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 SYN_00657 4b669bf862aa4d45a3cbd33e6d0a66f0 265 Gene3D G3DSA:3.40.50.360 27 222 1.4E-31 T 11-10-2018 IPR029039 Flavoprotein-like superfamily SYN_00769 e8bb142f94f9d25011deb704767de56a 200 Pfam PF09936 SAM-dependent RNA methyltransferase 13 192 7.2E-72 T 11-10-2018 IPR019230 RNA methyltransferase domain SYN_00769 e8bb142f94f9d25011deb704767de56a 200 Gene3D G3DSA:3.40.1280.10 11 198 6.0E-73 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SYN_00917 edcd901e6cbe9bfca1f9f60ec303608a 268 Pfam PF01148 Cytidylyltransferase family 6 262 2.4E-57 T 11-10-2018 SYN_00917 edcd901e6cbe9bfca1f9f60ec303608a 268 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 224 250 - T 11-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 SYN_01375 0423c96d027b3ce8e902823253006c5d 118 Pfam PF04343 Protein of unknown function, DUF488 5 112 1.9E-32 T 11-10-2018 IPR007438 Protein of unknown function DUF488 SYN_00149 514339222623140426ae3b0445c0f49d 464 Pfam PF05140 ResB-like family 18 342 6.6E-79 T 11-10-2018 IPR007816 ResB-like domain SYN_00149 514339222623140426ae3b0445c0f49d 464 Pfam PF05140 ResB-like family 370 451 1.2E-20 T 11-10-2018 IPR007816 ResB-like domain SYN_02565 1b202659d4ce30fff35af8f15bc97c3c 244 Pfam PF00881 Nitroreductase family 42 223 1.4E-21 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 SYN_02565 1b202659d4ce30fff35af8f15bc97c3c 244 SUPERFAMILY SSF55469 38 242 3.66E-29 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SYN_02565 1b202659d4ce30fff35af8f15bc97c3c 244 Gene3D G3DSA:3.40.109.10 35 241 1.2E-32 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 SYN_02246 7feabf394ac6653e83c717adf714b347 370 Gene3D G3DSA:3.40.50.10770 30 193 6.1E-23 T 11-10-2018 SYN_02246 7feabf394ac6653e83c717adf714b347 370 Pfam PF09651 CRISPR-associated protein (Cas_APE2256) 51 187 8.5E-40 T 11-10-2018 IPR013442 CRISPR-associated protein APE2256 SYN_02246 7feabf394ac6653e83c717adf714b347 370 TIGRFAM TIGR02619 TIGR02619: putative CRISPR-associated protein, APE2256 family 50 187 6.5E-13 T 11-10-2018 IPR013442 CRISPR-associated protein APE2256 SYN_01927 842e64bbb8dd7b760686d2093bbae6b8 266 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 136 265 2.5E-23 T 11-10-2018 IPR018550 Lipid A 3-O-deacylase-related SYN_01927 842e64bbb8dd7b760686d2093bbae6b8 266 Gene3D G3DSA:2.40.160.20 126 265 1.5E-14 T 11-10-2018 SYN_01136 c09dbf3cc22e5c2e6d8ec8a0d80b15b3 177 SUPERFAMILY SSF51161 22 135 3.33E-35 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily SYN_01136 c09dbf3cc22e5c2e6d8ec8a0d80b15b3 177 Gene3D G3DSA:2.160.10.10 5 167 8.5E-36 T 11-10-2018 SYN_01136 c09dbf3cc22e5c2e6d8ec8a0d80b15b3 177 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 81 115 6.9E-12 T 11-10-2018 IPR001451 Hexapeptide repeat SYN_02309 bc045293d2b38899e374728e9906fbab 132 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 60 131 3.3E-12 T 11-10-2018 IPR039561 Peptidase M15C GO:0008233 SYN_02309 bc045293d2b38899e374728e9906fbab 132 Gene3D G3DSA:3.30.1380.10 2 131 3.7E-27 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 SYN_02309 bc045293d2b38899e374728e9906fbab 132 SUPERFAMILY SSF55166 9 131 5.49E-18 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 SYN_01727 a68d252db4615c431b3d7d582c25e389 262 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 18 258 1.8E-59 T 11-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 SYN_03161 e4b8947f705b5cd3a15eada013fd9913 227 Gene3D G3DSA:3.40.920.10 20 169 4.2E-10 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 SYN_03161 e4b8947f705b5cd3a15eada013fd9913 227 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 32 118 3.9E-13 T 11-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SYN_03161 e4b8947f705b5cd3a15eada013fd9913 227 SUPERFAMILY SSF53323 24 214 3.01E-14 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 SYN_00082 307dc4dacc8dc4d9cf89f14f0e1c7abc 189 Pfam PF01925 Sulfite exporter TauE/SafE 62 178 1.5E-27 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 SYN_00484 e9fd192d430caac9d26336b2f980426d 334 Gene3D G3DSA:1.10.150.130 46 150 5.7E-10 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal SYN_00484 e9fd192d430caac9d26336b2f980426d 334 Gene3D G3DSA:1.10.443.10 152 329 1.4E-31 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 SYN_00484 e9fd192d430caac9d26336b2f980426d 334 Pfam PF00589 Phage integrase family 153 303 7.4E-24 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SYN_00484 e9fd192d430caac9d26336b2f980426d 334 SUPERFAMILY SSF56349 63 304 1.56E-47 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SYN_01577 f09c6241bdb7f432d1302ff666c41b12 182 SUPERFAMILY SSF56271 3 165 2.62E-46 T 11-10-2018 IPR016104 Pyruvoyl-dependent histidine/arginine decarboxylase GO:0006520|GO:0016831 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SYN_01577 f09c6241bdb7f432d1302ff666c41b12 182 Gene3D G3DSA:3.50.20.10 1 182 5.8E-43 T 11-10-2018 IPR016105 Pyruvoyl-dependent histidine/arginine decarboxylase, 3-layer sandwich domain GO:0006520|GO:0016831 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SYN_01577 f09c6241bdb7f432d1302ff666c41b12 182 TIGRFAM TIGR00286 TIGR00286: arginine decarboxylase, pyruvoyl-dependent 5 135 1.8E-39 T 11-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SYN_01577 f09c6241bdb7f432d1302ff666c41b12 182 ProDom PD010449 DECARBOXYLASE PYRUVOYL-DEPENDENT ARGININE SUBUNIT ALPHA CONTAINS: BETA PVLARGDC LYA DECARBOX 5 137 5.0E-33 T 11-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SYN_01577 f09c6241bdb7f432d1302ff666c41b12 182 PIRSF PIRSF005216 2 182 8.1E-66 T 11-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SYN_01577 f09c6241bdb7f432d1302ff666c41b12 182 Hamap MF_01404 Pyruvoyl-dependent arginine decarboxylase [pdaD]. 1 182 90.077 T 11-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SYN_01577 f09c6241bdb7f432d1302ff666c41b12 182 Pfam PF01862 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) 5 181 1.5E-60 T 11-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 SYN_01494 e405fdc6ab18ca7e714e738ca7b9f9d2 146 Pfam PF07811 TadE-like protein 15 57 2.0E-18 T 11-10-2018 IPR012495 TadE-like SYN_00336 7c4adb57c7e91ed5876a6ea1132a24d9 88 Gene3D G3DSA:3.40.30.10 8 81 2.6E-11 T 11-10-2018 SYN_00336 7c4adb57c7e91ed5876a6ea1132a24d9 88 SUPERFAMILY SSF52833 7 72 1.44E-11 T 11-10-2018 IPR036249 Thioredoxin-like superfamily SYN_00336 7c4adb57c7e91ed5876a6ea1132a24d9 88 Pfam PF00462 Glutaredoxin 13 66 3.0E-9 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 SYN_02412 7070c754fb91ec9abd483e9b38f2e1ef 101 TIGRFAM TIGR04117 Syntroph_Cxxx: Cys-Xaa-Xaa-Xaa repeat radical SAM target protein 1 97 5.3E-49 T 11-10-2018 IPR026484 Cys-Xaa-Xaa-Xaa repeat radical SAM target protein SYN_02412 7070c754fb91ec9abd483e9b38f2e1ef 101 TIGRFAM TIGR04114 tSAM_targ_Cxxx: modification target Cys-rich repeat 75 92 9.5E-5 T 11-10-2018 IPR026393 Modification target Cys-rich repeat SYN_02412 7070c754fb91ec9abd483e9b38f2e1ef 101 TIGRFAM TIGR04114 tSAM_targ_Cxxx: modification target Cys-rich repeat 56 73 0.017 T 11-10-2018 IPR026393 Modification target Cys-rich repeat SYN_00536 b510b59bc5aec1c6a334986cc9c630b6 242 SUPERFAMILY SSF81301 7 113 5.61E-8 T 11-10-2018 SYN_00536 b510b59bc5aec1c6a334986cc9c630b6 242 Gene3D G3DSA:3.30.460.10 4 118 1.2E-7 T 11-10-2018 SYN_00586 665acb06f0aea4a85b0dce88ca018ea4 101 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 19 70 2.7E-17 T 11-10-2018 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter SYN_02435 1a2e9eb738094a4a2973e05f1a702f16 214 Pfam PF09568 MjaI restriction endonuclease 4 178 4.3E-57 T 11-10-2018 IPR019068 Restriction endonuclease, type II, MjaI GO:0003677|GO:0009036|GO:0009307 SYN_03802 fbeb9f8bb4e69f64686ea489075b80b7 74 SUPERFAMILY SSF53807 4 73 2.16E-10 T 11-10-2018 SYN_03802 fbeb9f8bb4e69f64686ea489075b80b7 74 Gene3D G3DSA:1.20.58.2180 2 74 3.9E-26 T 11-10-2018 SYN_02496 d52c56067e17b7a44f1c0faaadcae4eb 218 Gene3D G3DSA:3.40.50.300 6 210 9.0E-55 T 11-10-2018 SYN_02496 d52c56067e17b7a44f1c0faaadcae4eb 218 Pfam PF13189 Cytidylate kinase-like family 11 193 3.7E-50 T 11-10-2018 SYN_02720 d5757706c14dc26abf51c8bfe4681434 233 Gene3D G3DSA:1.25.40.10 124 233 1.9E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 SYN_00689 3b2e2f027c4f4365f2c47b4d1518a5d3 234 PIRSF PIRSF020606 28 231 7.5E-72 T 11-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 SYN_00689 3b2e2f027c4f4365f2c47b4d1518a5d3 234 Pfam PF09997 Predicted membrane protein (DUF2238) 69 208 8.4E-54 T 11-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 SYN_01858 2508714a083ee2ec8926a46d9d0a34ee 239 Gene3D G3DSA:3.40.30.10 76 235 1.6E-27 T 11-10-2018 SYN_01858 2508714a083ee2ec8926a46d9d0a34ee 239 Pfam PF13098 Thioredoxin-like domain 108 219 4.3E-15 T 11-10-2018 IPR012336 Thioredoxin-like fold SYN_01858 2508714a083ee2ec8926a46d9d0a34ee 239 Pfam PF10411 Disulfide bond isomerase protein N-terminus 31 80 5.0E-14 T 11-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal SYN_01858 2508714a083ee2ec8926a46d9d0a34ee 239 SUPERFAMILY SSF52833 103 236 3.44E-24 T 11-10-2018 IPR036249 Thioredoxin-like superfamily SYN_01858 2508714a083ee2ec8926a46d9d0a34ee 239 SUPERFAMILY SSF54423 30 82 6.67E-8 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 SYN_00390 ce81b065fcb6622bc72c5d2302f99570 327 Pfam PF02371 Transposase IS116/IS110/IS902 family 198 284 1.3E-22 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 SYN_00390 ce81b065fcb6622bc72c5d2302f99570 327 Pfam PF01548 Transposase 12 156 1.6E-23 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 SYN_01266 f37d37bc61317e2af1bcddae2061375a 349 PRINTS PR01805 VacJ lipoprotein signature 136 149 4.8E-22 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 SYN_01266 f37d37bc61317e2af1bcddae2061375a 349 PRINTS PR01805 VacJ lipoprotein signature 153 169 4.8E-22 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 SYN_01266 f37d37bc61317e2af1bcddae2061375a 349 PRINTS PR01805 VacJ lipoprotein signature 242 259 4.8E-22 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 SYN_01266 f37d37bc61317e2af1bcddae2061375a 349 PRINTS PR01805 VacJ lipoprotein signature 204 221 4.8E-22 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 SYN_01266 f37d37bc61317e2af1bcddae2061375a 349 Pfam PF04333 MlaA lipoprotein 135 329 8.1E-65 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 SYN_00718 c35c334f40a180b8a483468c15b5ca6d 123 Gene3D G3DSA:3.10.180.10 1 123 3.1E-23 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SYN_00718 c35c334f40a180b8a483468c15b5ca6d 123 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 119 7.1E-14 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SYN_00718 c35c334f40a180b8a483468c15b5ca6d 123 SUPERFAMILY SSF54593 1 122 2.15E-24 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SYN_01907 8b3c855894b2f937e8aec68eb9df02ca 163 Gene3D G3DSA:2.60.40.790 21 161 1.9E-39 T 11-10-2018 IPR008978 HSP20-like chaperone SYN_01907 8b3c855894b2f937e8aec68eb9df02ca 163 Pfam PF00011 Hsp20/alpha crystallin family 61 160 5.1E-25 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain SYN_01907 8b3c855894b2f937e8aec68eb9df02ca 163 SUPERFAMILY SSF49764 33 161 1.5E-40 T 11-10-2018 IPR008978 HSP20-like chaperone SYN_02633 3e3a6d63d2a13a814cd20c2e12ade142 287 TIGRFAM TIGR03827 GNAT_ablB: putative beta-lysine N-acetyltransferase 20 286 1.0E-107 T 11-10-2018 IPR022525 Beta-lysine N-acetyltransferase GO:0016407 SYN_02633 3e3a6d63d2a13a814cd20c2e12ade142 287 Gene3D G3DSA:3.40.630.30 77 267 8.1E-13 T 11-10-2018 SYN_02633 3e3a6d63d2a13a814cd20c2e12ade142 287 SUPERFAMILY SSF55729 125 267 5.93E-15 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase SYN_01458 cfc9ac631ae5c554c8c6431657076ba5 198 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 4 188 8.5E-37 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 SYN_01458 cfc9ac631ae5c554c8c6431657076ba5 198 Pfam PF01914 MarC family integral membrane protein 1 189 9.1E-40 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 SYN_00005 bd6a8ced8d7da018a280dc3560650adc 559 Pfam PF00350 Dynamin family 55 107 3.2E-11 T 11-10-2018 IPR022812 Dynamin superfamily SYN_00005 bd6a8ced8d7da018a280dc3560650adc 559 Pfam PF00350 Dynamin family 112 183 1.5E-10 T 11-10-2018 IPR022812 Dynamin superfamily SYN_00005 bd6a8ced8d7da018a280dc3560650adc 559 Gene3D G3DSA:3.40.50.300 3 246 1.6E-33 T 11-10-2018 SYN_00005 bd6a8ced8d7da018a280dc3560650adc 559 SUPERFAMILY SSF52540 52 242 1.64E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_02362 e9b8f5cdd961bab1604b1cca2873d9ad 178 Pfam PF02620 Uncharacterized ACR, COG1399 56 171 8.9E-35 T 11-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD SYN_02324 aa5513eed9f5c3a42ee77310193d2fea 186 Pfam PF06252 Protein of unknown function (DUF1018) 51 160 6.0E-25 T 11-10-2018 IPR009363 Bacteriophage Mu, Gp16 SYN_02719 00b65cf53b9c09c9b843574c4ae99728 153 Gene3D G3DSA:2.30.110.10 20 153 9.9E-34 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 SYN_02719 00b65cf53b9c09c9b843574c4ae99728 153 SUPERFAMILY SSF50475 18 150 2.2E-24 T 11-10-2018 SYN_02719 00b65cf53b9c09c9b843574c4ae99728 153 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 21 104 2.3E-15 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 SYN_02406 35f68d4e918fda129cc93e644e5056df 125 TIGRFAM TIGR04114 tSAM_targ_Cxxx: modification target Cys-rich repeat 80 97 0.013 T 11-10-2018 IPR026393 Modification target Cys-rich repeat SYN_02406 35f68d4e918fda129cc93e644e5056df 125 TIGRFAM TIGR04114 tSAM_targ_Cxxx: modification target Cys-rich repeat 68 85 0.016 T 11-10-2018 IPR026393 Modification target Cys-rich repeat SYN_02406 35f68d4e918fda129cc93e644e5056df 125 TIGRFAM TIGR04117 Syntroph_Cxxx: Cys-Xaa-Xaa-Xaa repeat radical SAM target protein 1 102 4.7E-41 T 11-10-2018 IPR026484 Cys-Xaa-Xaa-Xaa repeat radical SAM target protein SYN_00206 d6821b536f141c3445872cab12adba00 189 Pfam PF01384 Phosphate transporter family 22 157 1.1E-39 T 11-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 SYN_03160 fcde97ea6df268d471b77e698b5a8558 66 SUPERFAMILY SSF89360 4 49 6.87E-6 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 SYN_01415 a9978389e8dcd0cf6e0c44a9126c0fe5 198 SMART SM00471 28 140 6.3E-5 T 11-10-2018 IPR003607 HD/PDEase domain SYN_01415 a9978389e8dcd0cf6e0c44a9126c0fe5 198 Gene3D G3DSA:1.10.3210.10 1 178 9.0E-51 T 11-10-2018 SYN_01415 a9978389e8dcd0cf6e0c44a9126c0fe5 198 SUPERFAMILY SSF109604 2 188 1.22E-36 T 11-10-2018 SYN_01415 a9978389e8dcd0cf6e0c44a9126c0fe5 198 Pfam PF13023 HD domain 11 146 6.5E-26 T 11-10-2018 IPR006674 HD domain SYN_02575 a6e6dab394555481d115e1b3bd37f2b7 163 Pfam PF06210 Protein of unknown function (DUF1003) 45 144 1.4E-33 T 11-10-2018 IPR010406 Protein of unknown function DUF1003 SYN_01940 425d47facf618fd3cbd283eff16240f4 372 Gene3D G3DSA:3.30.70.1140 31 106 5.4E-25 T 11-10-2018 SYN_01940 425d47facf618fd3cbd283eff16240f4 372 Gene3D G3DSA:3.20.20.70 107 363 4.6E-102 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 SYN_01940 425d47facf618fd3cbd283eff16240f4 372 SUPERFAMILY SSF51569 31 364 1.28E-115 T 11-10-2018 SYN_01940 425d47facf618fd3cbd283eff16240f4 372 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 102 359 4.0E-124 T 11-10-2018 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 SYN_01940 425d47facf618fd3cbd283eff16240f4 372 Pfam PF00793 DAHP synthetase I family 117 359 5.2E-75 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 SYN_00016 7c7f864d9a35a9cbd05e7f915eb317ba 113 Gene3D G3DSA:3.30.2310.40 3 108 3.2E-30 T 11-10-2018 IPR038493 Toxin MqsR superfamily SYN_00016 7c7f864d9a35a9cbd05e7f915eb317ba 113 Pfam PF15723 Motility quorum-sensing regulator, toxin of MqsA 10 107 1.1E-30 T 11-10-2018 IPR031451 mRNA interferase toxin MqsR GO:0009372|GO:0017148|GO:0044010 SYN_01490 068e2a85925f54b9924ee9b2bb5ad838 180 Pfam PF01478 Type IV leader peptidase family 15 117 2.5E-18 T 11-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 SYN_01490 068e2a85925f54b9924ee9b2bb5ad838 180 Gene3D G3DSA:1.20.120.1220 5 147 2.3E-11 T 11-10-2018 SYN_00743 eed0603c8d5465044ee6b0348e953905 148 SUPERFAMILY SSF52540 1 130 3.83E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_00743 eed0603c8d5465044ee6b0348e953905 148 Gene3D G3DSA:1.10.8.300 37 144 4.1E-30 T 11-10-2018 SYN_02108 86eee98cb4973cdb2c4af819002a202d 215 SUPERFAMILY SSF46689 5 79 7.18E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 SYN_02108 86eee98cb4973cdb2c4af819002a202d 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 8.0E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SYN_02108 86eee98cb4973cdb2c4af819002a202d 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 8.0E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SYN_02108 86eee98cb4973cdb2c4af819002a202d 215 SUPERFAMILY SSF48498 80 201 4.89E-9 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily SYN_02108 86eee98cb4973cdb2c4af819002a202d 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 58 3.1E-15 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SYN_02108 86eee98cb4973cdb2c4af819002a202d 215 Gene3D G3DSA:1.10.357.10 1 215 4.4E-93 T 11-10-2018 SYN_02475 6794c20385c9bfe2e6b577c25563a3f7 291 Pfam PF05107 CRISPR-associated protein Cas7 6 272 7.4E-73 T 11-10-2018 IPR006482 CRISPR-associated protein Cas7, subtype I-B/I-C SYN_02475 6794c20385c9bfe2e6b577c25563a3f7 291 TIGRFAM TIGR01595 cas_CT1132: CRISPR-associated protein, CT1132 family 5 265 5.2E-61 T 11-10-2018 IPR006482 CRISPR-associated protein Cas7, subtype I-B/I-C SYN_02475 6794c20385c9bfe2e6b577c25563a3f7 291 TIGRFAM TIGR02589 cas_Csd2: CRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG 7 270 1.2E-93 T 11-10-2018 IPR013418 CRISPR-associated protein Csd2 SYN_02853 9847e0be18fff98954d33f37bb4cfe33 653 Pfam PF01295 Adenylate cyclase, class-I 258 588 1.2E-35 T 11-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 SYN_02853 9847e0be18fff98954d33f37bb4cfe33 653 Pfam PF12633 Adenylate cyclase NT domain 32 231 5.0E-43 T 11-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 SYN_00787 74ae66338732b94d2811f50ba57c14c5 400 Pfam PF02653 Branched-chain amino acid transport system / permease component 113 378 1.6E-50 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 SYN_01469 33d0486280dc8efb455e2b3840a96813 101 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 65 81 3.8E-15 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SYN_01469 33d0486280dc8efb455e2b3840a96813 101 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 31 47 3.8E-15 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SYN_01469 33d0486280dc8efb455e2b3840a96813 101 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 86 99 3.8E-15 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SYN_01469 33d0486280dc8efb455e2b3840a96813 101 Pfam PF02049 Flagellar hook-basal body complex protein FliE 24 101 7.6E-28 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SYN_01469 33d0486280dc8efb455e2b3840a96813 101 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 25 101 6.9E-23 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SYN_01469 33d0486280dc8efb455e2b3840a96813 101 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 101 17.007 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 SYN_00856 cc8d6eee926a59466b1112f4cdd80a8b 482 Gene3D G3DSA:3.90.550.10 50 318 3.3E-38 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_00856 cc8d6eee926a59466b1112f4cdd80a8b 482 Pfam PF13632 Glycosyl transferase family group 2 166 388 1.2E-19 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 SYN_00856 cc8d6eee926a59466b1112f4cdd80a8b 482 SUPERFAMILY SSF53448 42 373 1.59E-50 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases SYN_02093 90daaaefd838bfb2a73806c5670eda14 230 Pfam PF13189 Cytidylate kinase-like family 41 208 2.9E-37 T 11-10-2018 SYN_02093 90daaaefd838bfb2a73806c5670eda14 230 SUPERFAMILY SSF52540 47 223 6.97E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01065 d205b85b277534d2e4935776c02806b9 153 Pfam PF04773 FecR protein 59 151 1.3E-8 T 11-10-2018 IPR006860 FecR protein SYN_00008 caddce07d292c9f510e01ba67b7a4c10 700 Pfam PF04465 Protein of unknown function (DUF499) 299 619 1.4E-21 T 11-10-2018 IPR007555 Protein of unknown function DUF499 SYN_01573 17f047cc0d34d947b743d1af8e5dc6c2 252 Gene3D G3DSA:3.40.50.300 33 227 9.6E-12 T 11-10-2018 SYN_01573 17f047cc0d34d947b743d1af8e5dc6c2 252 SUPERFAMILY SSF52540 37 189 3.65E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase SYN_01962 6865395fafd5aaa4c512e934e98739ff 314 Gene3D G3DSA:3.40.50.150 38 170 5.4E-13 T 11-10-2018 SYN_01962 6865395fafd5aaa4c512e934e98739ff 314 SUPERFAMILY SSF53335 44 149 3.82E-14 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SYN_03130 3163e0549e7244260f4c349b57910e6d 218 Pfam PF01184 GPR1/FUN34/yaaH family 3 203 1.6E-4 T 11-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 SYN_01296 093861c4c03acb5e233c0bfac5ef6e98 76 Pfam PF11823 Protein of unknown function (DUF3343) 10 66 1.4E-18 T 11-10-2018 IPR021778 Domain of unknown function DUF3343 SYN_00784 5ab7e79d530fa65b02a997c788f2eec0 153 Pfam PF00011 Hsp20/alpha crystallin family 51 144 2.8E-10 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain SYN_00784 5ab7e79d530fa65b02a997c788f2eec0 153 Gene3D G3DSA:2.60.40.790 9 149 1.4E-27 T 11-10-2018 IPR008978 HSP20-like chaperone SYN_00784 5ab7e79d530fa65b02a997c788f2eec0 153 SUPERFAMILY SSF49764 26 148 2.79E-26 T 11-10-2018 IPR008978 HSP20-like chaperone SYN_00975 6174010b9150e2a9ba70888849309a2f 169 SUPERFAMILY SSF50341 22 163 7.85E-41 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 SYN_00975 6174010b9150e2a9ba70888849309a2f 169 Pfam PF01584 CheW-like domain 23 161 4.8E-36 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 SYN_00975 6174010b9150e2a9ba70888849309a2f 169 SMART SM00260 18 159 1.0E-36 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 SYN_00975 6174010b9150e2a9ba70888849309a2f 169 Gene3D G3DSA:2.40.50.180 41 154 6.7E-45 T 11-10-2018 SYN_00975 6174010b9150e2a9ba70888849309a2f 169 Gene3D G3DSA:2.30.30.40 24 153 6.7E-45 T 11-10-2018 SYN_02735 877f71fb6243ae201b71933d7fa7c756 79 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 1 64 5.1E-13 T 11-10-2018 IPR009241 Toxin HigB-like SYN_01850 b7d919f9d4762a237b17d24858f6d904 258 Pfam PF08861 Domain of unknown function DUF1828 33 122 1.4E-25 T 11-10-2018 IPR014960 Domain of unknown function DUF1828 SYN_03698 61fb3dea6c5b716353cef4f6d901951c 66 Gene3D G3DSA:3.40.190.10 1 56 1.4E-7 T 11-10-2018 SYN_03698 61fb3dea6c5b716353cef4f6d901951c 66 SUPERFAMILY SSF53850 3 52 3.69E-8 T 11-10-2018 SYN_01452 8f3ffe8a3d4bee499ad5863494b67b4b 84 Pfam PF13453 Transcription factor zinc-finger 2 28 1.2E-10 T 11-10-2018 IPR027392 Transcription factor zinc-finger SYN_03849 2c00ddc377887b46d657553155e193fb 171 Pfam PF13529 Peptidase_C39 like family 27 136 3.2E-11 T 11-10-2018 IPR039564 Peptidase C39-like SYN_03849 2c00ddc377887b46d657553155e193fb 171 Gene3D G3DSA:3.90.70.10 33 169 5.5E-18 T 11-10-2018 SYN_00132 08ed19eb6b9941d073646b22fbcbbf1b 418 Pfam PF04932 O-Antigen ligase 197 342 2.3E-9 T 11-10-2018 IPR007016 O-antigen ligase-related SYN_02429 7104f38701cb35aa4dfb85cf0eb4886b 105 Pfam PF09851 Short C-terminal domain 78 103 1.6E-10 T 11-10-2018 IPR018649 SHOCT domain SYN_03101 d7aedf04bb57b70de42238a6ef1dcbb0 196 Gene3D G3DSA:3.40.50.1010 11 183 2.1E-22 T 11-10-2018 SYN_03101 d7aedf04bb57b70de42238a6ef1dcbb0 196 Pfam PF01936 NYN domain 16 179 8.8E-29 T 11-10-2018 IPR021139 NYN domain, limkain-b1-type SYN_01196 537dbecd1158f309237ce15ba067ff0e 143 Gene3D G3DSA:3.30.2130.10 1 142 4.5E-50 T 11-10-2018 SYN_01196 537dbecd1158f309237ce15ba067ff0e 143 Pfam PF01842 ACT domain 5 60 4.9E-10 T 11-10-2018 IPR002912 ACT domain SYN_01196 537dbecd1158f309237ce15ba067ff0e 143 SUPERFAMILY SSF55021 71 140 1.24E-14 T 11-10-2018 SYN_01196 537dbecd1158f309237ce15ba067ff0e 143 SUPERFAMILY SSF55021 1 68 8.73E-17 T 11-10-2018 SYN_01329 555ad502a55736bd44861e0922868f35 165 Gene3D G3DSA:3.40.50.300 32 151 2.6E-12 T 11-10-2018 SYN_01329 555ad502a55736bd44861e0922868f35 165 Pfam PF01695 IstB-like ATP binding protein 86 133 7.8E-11 T 11-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 SYN_01027 cf5c1c209173d2cd50b80c1141583240 199 Pfam PF12092 Protein of unknown function (DUF3568) 12 129 4.8E-17 T 11-10-2018 IPR021952 Protein of unknown function DUF3568 SYN_00753 99e1eb6a9546fc9bce39ad840a17ef64 146 Pfam PF14357 Domain of unknown function (DUF4404) 112 146 5.6E-7 T 11-10-2018 IPR025516 Protein of unknown function DUF4404 SYN_02284 7059728903193400bac2250f060605e5 182 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 20 182 3.6E-43 T 11-10-2018 IPR018755 Bacteriophage Mu-like, Gp48 SYN_00852 c5968a9221ef7b32acf09c7ad98ea28a 462 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 102 352 1.6E-19 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SYN_00852 c5968a9221ef7b32acf09c7ad98ea28a 462 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 92 373 1.5E-41 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 SYN_00852 c5968a9221ef7b32acf09c7ad98ea28a 462 SUPERFAMILY SSF111369 102 356 2.22E-18 T 11-10-2018 SYN_01547 9fceb70c67cbb7ebd4cb8879f59a0236 219 SUPERFAMILY SSF49265 44 120 1.48E-9 T 11-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 SYN_01547 9fceb70c67cbb7ebd4cb8879f59a0236 219 Gene3D G3DSA:2.60.40.10 37 121 4.5E-15 T 11-10-2018 IPR013783 Immunoglobulin-like fold SYN_01346 44dbf565b474a527c7a4a76a411fe910 252 SUPERFAMILY SSF46565 182 218 3.93E-10 T 11-10-2018 IPR036869 Chaperone J-domain superfamily SYN_01346 44dbf565b474a527c7a4a76a411fe910 252 Gene3D G3DSA:1.10.287.110 161 225 3.6E-10 T 11-10-2018 IPR036869 Chaperone J-domain superfamily SYN_00878 8454d3f948b1e00acfa0b97e18af33ab 64 Pfam PF11146 Protein of unknown function (DUF2905) 1 61 4.2E-21 T 11-10-2018 IPR021320 Protein of unknown function DUF2905 SYN_00961 7c09ba5f33f11c8c1892268bc2bbf9d2 172 SUPERFAMILY SSF103039 17 167 5.89E-35 T 11-10-2018 IPR028976 CheC-like superfamily SYN_00961 7c09ba5f33f11c8c1892268bc2bbf9d2 172 Pfam PF13690 Chemotaxis phosphatase CheX 58 155 8.7E-26 T 11-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain SYN_00961 7c09ba5f33f11c8c1892268bc2bbf9d2 172 Gene3D G3DSA:3.40.1550.10 17 168 7.1E-48 T 11-10-2018 IPR028976 CheC-like superfamily SYN_00385 89b4048404effc58ef7d18c0a4cfb097 307 Pfam PF13557 Putative MetA-pathway of phenol degradation 69 303 3.8E-77 T 11-10-2018 IPR025737 MetA-pathway of phenol degradation, putative SYN_02332 d76b7b9bd10c86be1f8933415892212f 295 Pfam PF15931 Domain of unknown function (DUF4747) 18 269 1.8E-90 T 11-10-2018 IPR031832 Protein of unknown function DUF4747 SYN_02363 8e493cc88a51e3e706ce2f2d77d904f7 61 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 3 56 2.1E-23 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_02363 8e493cc88a51e3e706ce2f2d77d904f7 61 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 19.967 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_02363 8e493cc88a51e3e706ce2f2d77d904f7 61 Pfam PF01783 Ribosomal L32p protein family 3 56 1.2E-24 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_02363 8e493cc88a51e3e706ce2f2d77d904f7 61 SUPERFAMILY SSF57829 1 57 3.48E-20 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 SYN_03173 2f2f2911a1a53bc51d6b0fda312f0c18 108 SUPERFAMILY SSF48295 9 73 1.05E-14 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 SYN_03173 2f2f2911a1a53bc51d6b0fda312f0c18 108 Pfam PF01527 Transposase 13 90 3.7E-8 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SYN_01867 6753dbc13bf00815b46718805a8373ca 1409 SMART SM00289 382 418 58.0 T 11-10-2018 IPR006150 Cysteine-rich repeat SYN_01867 6753dbc13bf00815b46718805a8373ca 1409 SMART SM00289 291 318 14.0 T 11-10-2018 IPR006150 Cysteine-rich repeat SYN_01867 6753dbc13bf00815b46718805a8373ca 1409 SMART SM00289 905 943 10.0 T 11-10-2018 IPR006150 Cysteine-rich repeat SYN_01867 6753dbc13bf00815b46718805a8373ca 1409 SMART SM00289 1006 1045 120.0 T 11-10-2018 IPR006150 Cysteine-rich repeat SYN_01867 6753dbc13bf00815b46718805a8373ca 1409 SMART SM00289 583 621 62.0 T 11-10-2018 IPR006150 Cysteine-rich repeat SYN_01867 6753dbc13bf00815b46718805a8373ca 1409 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 1202 1362 5.5E-22 T 11-10-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN SYN_02684 955645d0c7c7b2e22580ea0ef49404ce 735 Gene3D G3DSA:1.50.10.100 70 405 3.4E-65 T 11-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 SYN_02684 955645d0c7c7b2e22580ea0ef49404ce 735 Gene3D G3DSA:2.70.98.70 441 696 4.7E-31 T 11-10-2018 SYN_02684 955645d0c7c7b2e22580ea0ef49404ce 735 Pfam PF16889 Heparinase II/III N-terminus 163 363 9.5E-23 T 11-10-2018 IPR031680 Heparin-sulfate lyase, N-terminal MetaCyc: PWY-7651 SYN_02684 955645d0c7c7b2e22580ea0ef49404ce 735 Pfam PF07940 Heparinase II/III-like protein 436 669 3.3E-50 T 11-10-2018 IPR012480 Heparinase II/III-like GO:0016829 SYN_02684 955645d0c7c7b2e22580ea0ef49404ce 735 SUPERFAMILY SSF48230 149 432 5.49E-40 T 11-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 SYN_01845 afe9776bbbf7b899a9f53e6036f17f2c 409 Pfam PF09376 NurA domain 97 366 2.4E-4 T 11-10-2018 IPR018977 NurA domain SYN_01845 afe9776bbbf7b899a9f53e6036f17f2c 409 SMART SM00933 96 367 1.6E-28 T 11-10-2018 IPR018977 NurA domain SYN_01653 dc76ad8814af62e80decd93d02fe59a5 256 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 256 1.3E-47 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 SYN_01653 dc76ad8814af62e80decd93d02fe59a5 256 SUPERFAMILY SSF52096 1 255 1.61E-69 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily SYN_01653 dc76ad8814af62e80decd93d02fe59a5 256 Gene3D G3DSA:3.90.226.10 1 256 3.2E-69 T 11-10-2018 SYN_00207 92cb3b4ffe60cec7adb8afbc72bbf8fe 350 Pfam PF01594 AI-2E family transporter 11 339 1.1E-54 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like SYN_02252 2f508f58d97c64b1ae00c4c94852e057 289 Pfam PF03787 RAMP superfamily 16 161 2.7E-12 T 11-10-2018 IPR005537 CRISPR type III-associated RAMP protein SYN_02252 2f508f58d97c64b1ae00c4c94852e057 289 TIGRFAM TIGR01894 cas_TM1795_cmr1: CRISPR type III-B/RAMP module RAMP protein Cmr1 18 164 5.8E-26 T 11-10-2018 IPR007522 CRISPR-associated protein TM1795 SYN_00809 1a57b6c8d8277eefcf3a4475581ce75e 101 Pfam PF07238 PilZ domain 3 85 3.4E-10 T 11-10-2018 IPR009875 PilZ domain GO:0035438 SYN_00809 1a57b6c8d8277eefcf3a4475581ce75e 101 SUPERFAMILY SSF141371 25 87 6.67E-6 T 11-10-2018 SYN_00809 1a57b6c8d8277eefcf3a4475581ce75e 101 Gene3D G3DSA:2.40.10.220 1 96 2.6E-5 T 11-10-2018 SYN_01661 2541f7dd943008f1f77b5a1f18141968 214 Pfam PF02508 Rnf-Nqr subunit, membrane protein 17 196 2.1E-49 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 SYN_01661 2541f7dd943008f1f77b5a1f18141968 214 PIRSF PIRSF006102 11 214 5.2E-59 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 SYN_01049 8eec1ce831b184ce88a129d65eea771d 136 Gene3D G3DSA:3.40.50.1980 42 101 1.3E-15 T 11-10-2018 SYN_00407 3feca22f47b895afd259656f691a5195 319 Pfam PF14326 Domain of unknown function (DUF4384) 181 258 1.6E-16 T 11-10-2018 IPR025493 Domain of unknown function DUF4384 SYN_02270 d0ce75bc81194af435356735fa4b79e4 338 Gene3D G3DSA:1.20.58.1130 13 217 6.5E-39 T 11-10-2018 SYN_02270 d0ce75bc81194af435356735fa4b79e4 338 Gene3D G3DSA:1.20.1420.30 39 326 6.5E-39 T 11-10-2018 SYN_02270 d0ce75bc81194af435356735fa4b79e4 338 Pfam PF01699 Sodium/calcium exchanger protein 8 152 2.4E-14 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 SYN_02270 d0ce75bc81194af435356735fa4b79e4 338 Pfam PF01699 Sodium/calcium exchanger protein 186 331 2.0E-10 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 SYN_00931 6c30d8433f1bc12a6fd6a606a0f4df4c 572 SUPERFAMILY SSF69318 232 548 2.44E-18 T 11-10-2018 SYN_00931 6c30d8433f1bc12a6fd6a606a0f4df4c 572 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 245 304 2.7E-11 T 11-10-2018 SYN_03385 a05442cbfee0fd935cf66fc8df0df0ef 271 Pfam PF01578 Cytochrome C assembly protein 66 259 1.6E-32 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 SYN_02838 69c449173999e2c7bccff7037a36db89 164 Pfam PF03748 Flagellar basal body-associated protein FliL 70 164 2.3E-26 T 11-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 SYN_03044 8e7d1c21569be23a3e1401bb90c2be41 269 Gene3D G3DSA:2.60.120.1440 58 206 2.3E-8 T 11-10-2018 SYN_03044 8e7d1c21569be23a3e1401bb90c2be41 269 Pfam PF04773 FecR protein 81 183 1.9E-16 T 11-10-2018 IPR006860 FecR protein SYN_01358 25ee1442a128ef31474a0ef673a3ec75 381 SUPERFAMILY SSF109604 40 184 1.16E-5 T 11-10-2018 SYN_01358 25ee1442a128ef31474a0ef673a3ec75 381 Gene3D G3DSA:1.10.3210.10 29 190 7.3E-9 T 11-10-2018 SYN_01818 828869dd4290b52a7286a238839ad1a1 211 Pfam PF13835 Domain of unknown function (DUF4194) 25 188 7.1E-49 T 11-10-2018 IPR025449 Protein of unknown function DUF4194 SYN_01143 39d6c3daf417afeb89c8f9c2e85b4108 300 SUPERFAMILY SSF55729 102 249 6.0E-7 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase SYN_03221 05f44aa8d50711ac335f4dba095d9236 142 Pfam PF03692 Putative zinc- or iron-chelating domain 42 127 9.9E-9 T 11-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein SYN_01847 27ef9bc19aa04f4ac05e14c667314ca5 972 Pfam PF04465 Protein of unknown function (DUF499) 145 546 3.3E-23 T 11-10-2018 IPR007555 Protein of unknown function DUF499 SYN_00021 b76ac032de0b930ab8753fa654b2b93e 404 Gene3D G3DSA:1.20.1090.10 233 404 3.9E-70 T 11-10-2018 SYN_00021 b76ac032de0b930ab8753fa654b2b93e 404 Gene3D G3DSA:3.40.50.1970 49 231 9.4E-45 T 11-10-2018 SYN_00021 b76ac032de0b930ab8753fa654b2b93e 404 Pfam PF00465 Iron-containing alcohol dehydrogenase 59 345 4.3E-53 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 SYN_00021 b76ac032de0b930ab8753fa654b2b93e 404 SUPERFAMILY SSF56796 52 391 2.09E-67 T 11-10-2018 SYN_01100 dba5b89e6a45e116d6e9de203105a70e 490 SUPERFAMILY SSF56801 151 435 6.54E-12 T 11-10-2018 SYN_01100 dba5b89e6a45e116d6e9de203105a70e 490 Gene3D G3DSA:3.40.50.12780 67 386 7.0E-64 T 11-10-2018 SYN_01096 8d0e3ea84e07be56be1af0c8c588877a 540 ProSitePatterns PS01348 MraY family signature 2. 147 158 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 SYN_01096 8d0e3ea84e07be56be1af0c8c588877a 540 Pfam PF00953 Glycosyl transferase family 4 72 226 2.8E-38 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 SYN_01868 f658cc60b35a44ce4c46ecc2e291838b 277 Pfam PF12477 Sex factor F TraW protein N terminal 72 99 7.2E-9 T 11-10-2018 IPR025864 Type-F conjugative transfer system protein TraW N-terminal domain SYN_03479 42ff073f408b43ccba26ed51d9a0fa99 52 Pfam PF12694 Putative molybdenum carrier 4 51 3.4E-20 T 11-10-2018 IPR024755 Molybdenum cofactor carrier, putative SYN_03479 42ff073f408b43ccba26ed51d9a0fa99 52 Gene3D G3DSA:3.40.50.450 3 52 3.8E-20 T 11-10-2018 SYN_00197 4fc33de05594b94b582eb6ecb5bdbc99 421 Pfam PF02646 RmuC family 122 410 1.3E-78 T 11-10-2018 IPR003798 DNA recombination RmuC SYN_02390 550c303aa9184a2425ba0cf4997f0a84 131 Pfam PF00872 Transposase, Mutator family 15 85 5.8E-12 T 11-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 SYN_01659 8357660b4354b7f6d7763863bc7ba53f 323 Pfam PF02508 Rnf-Nqr subunit, membrane protein 135 320 1.1E-46 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 SYN_01133 36799f25b2d8b1d69ec1d86c6911eaa2 405 Pfam PF04932 O-Antigen ligase 196 337 1.2E-9 T 11-10-2018 IPR007016 O-antigen ligase-related SYN_01353 3575ccd34e3baa69ed7161e02c113ae0 105 Pfam PF00829 Ribosomal prokaryotic L21 protein 3 103 3.6E-38 T 11-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01353 3575ccd34e3baa69ed7161e02c113ae0 105 TIGRFAM TIGR00061 L21: ribosomal protein bL21 4 104 1.0E-35 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01353 3575ccd34e3baa69ed7161e02c113ae0 105 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 3 105 26.604 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_01353 3575ccd34e3baa69ed7161e02c113ae0 105 SUPERFAMILY SSF141091 3 104 7.59E-36 T 11-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 SYN_03047 06d5e3c0cdecf8837f0adaacf7fc889a 153 Pfam PF08899 Domain of unknown function (DUF1844) 76 148 4.6E-29 T 11-10-2018 IPR014995 Protein of unknown function DUF1844 SYN_02064 0bc6fa947027925b708cdd299a95813d 373 Pfam PF12698 ABC-2 family transporter protein 24 362 5.8E-31 T 11-10-2018 SYN_00838 b06100c16a17d46d46a6c184aec8b8e4 232 Gene3D G3DSA:1.10.3720.10 4 231 2.2E-29 T 11-10-2018 IPR035906 MetI-like superfamily SYN_00838 b06100c16a17d46d46a6c184aec8b8e4 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 41 228 1.0E-15 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 SYN_00838 b06100c16a17d46d46a6c184aec8b8e4 232 SUPERFAMILY SSF161098 16 226 2.35E-32 T 11-10-2018 IPR035906 MetI-like superfamily SYN_01134 432c3389414a94e8fbd5f57b5500ee3e 527 Pfam PF01943 Polysaccharide biosynthesis protein 30 305 1.3E-7 T 11-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 SYN_01380 cd90b263337d71e61c5aaad0bbeefdae 1210 SUPERFAMILY SSF55874 115 163 2.53E-6 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily SYN_02932 ce803d7b65da850646124a25a13faaa8 106 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 85 2.1E-11 T 11-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 SYN_01367 1f367e6cf98e08647c1db068bb1d7600 226 Pfam PF04474 Protein of unknown function (DUF554) 2 221 1.3E-75 T 11-10-2018 IPR007563 Protein of unknown function DUF554 SYN_01110 ffc15f8ba2ee534a493263dabcde264c 322 SUPERFAMILY SSF52266 60 315 1.62E-9 T 11-10-2018 SYN_02100 0692e7462ffd60f93dc3020cbd1033bf 107 Pfam PF12966 N-ATPase, AtpR subunit 7 90 1.4E-25 T 11-10-2018 IPR017581 N-ATPase, AtpR subunit-like SYN_02100 0692e7462ffd60f93dc3020cbd1033bf 107 TIGRFAM TIGR03165 F1F0_chp_2: F1/F0 ATPase, Methanosarcina type, subunit 2 7 86 1.3E-19 T 11-10-2018 IPR017581 N-ATPase, AtpR subunit-like SYN_03191 5faee34971b4d4ad98235a705842148e 87 Pfam PF12728 Helix-turn-helix domain 17 60 4.8E-8 T 11-10-2018 SYN_00014 979b73111ba6cce710afc0c3ed7b3097 148 SUPERFAMILY SSF54611 4 134 1.59E-27 T 11-10-2018 IPR035958 SecB-like superfamily SYN_00014 979b73111ba6cce710afc0c3ed7b3097 148 Pfam PF02556 Preprotein translocase subunit SecB 37 133 5.5E-20 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SYN_00014 979b73111ba6cce710afc0c3ed7b3097 148 Gene3D G3DSA:3.10.420.10 3 147 6.9E-23 T 11-10-2018 IPR035958 SecB-like superfamily SYN_00840 b9b09917c30892d8583293039a3baf5e 240 Gene3D G3DSA:3.30.70.2200 2 154 2.0E-12 T 11-10-2018 SYN_00113 ac69abef6b42a7495273115e7d6313fe 194 Pfam PF01548 Transposase 11 155 1.3E-26 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 SYN_00355 6c78656aae55945c3db6a6509ea081b4 176 Pfam PF04143 Sulphur transport 33 170 1.5E-18 T 11-10-2018 IPR007272 Sulphur transport domain SYN_00828 b2431d535dc9b895c3762e3f33470a33 147 SUPERFAMILY SSF51182 28 146 8.16E-12 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily SYN_03449 7ce72f2272b321fb85e71fd0c5525383 102 Pfam PF12439 Glycogen debranching enzyme N terminal 18 81 8.0E-17 T 11-10-2018 IPR024742 Glycogen debranching enzyme, bacterial and archaeal type, N-terminal SYN_03745 b9e9f99f2dc093eea753207185eeb6b0 375 Pfam PF16983 Molybdate transporter of MFS superfamily 203 319 1.9E-24 T 11-10-2018 IPR031563 Molybdate transporter 1/2 GO:0015098|GO:0015689 SYN_03745 b9e9f99f2dc093eea753207185eeb6b0 375 Pfam PF16983 Molybdate transporter of MFS superfamily 12 125 1.1E-31 T 11-10-2018 IPR031563 Molybdate transporter 1/2 GO:0015098|GO:0015689 SYN_03002 57e4c8157eedd466155aa3699bed27e2 203 Pfam PF13488 Glycine zipper 36 76 3.2E-9 T 11-10-2018 IPR039567 Glycine zipper domain SYN_02410 edd930d4e2705a29c0b3e49a8f587518 113 TIGRFAM TIGR04116 CXXX_rpt_assoc: CXXX repeat peptide modification system protein 21 110 4.0E-33 T 11-10-2018 IPR026413 CXXX repeat peptide modification system protein SYN_00343 9ea4ace4d387bf85a31fa320249a8660 372 Pfam PF03773 Predicted permease 12 368 9.7E-55 T 11-10-2018 IPR005524 Predicted permease DUF318 SYN_00351 118a3507130b6ca1503ae04117b10f47 396 Pfam PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit 88 208 2.0E-13 T 11-10-2018 IPR016041 CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel SYN_00351 118a3507130b6ca1503ae04117b10f47 396 Gene3D G3DSA:3.40.50.11600 88 215 1.3E-42 T 11-10-2018 SYN_02281 946ce693c02cdf6b9b689e739bd2fe78 329 Pfam PF01757 Acyltransferase family 4 289 1.6E-18 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 SYN_03817 cbfdb643fe719f69b8311aa827f3fb78 163 Pfam PF07291 Methylamine utilisation protein MauE 17 135 2.3E-11 T 11-10-2018 IPR009908 Methylamine utilisation protein, MauE GO:0016021|GO:0030416 SYN_01170 6490040ede7ddee7c1bb4ea869e26f14 115 Pfam PF17253 Family of unknown function (DUF5320) 1 108 4.4E-29 T 11-10-2018 IPR035205 Protein of unknown function DUF5320 SYN_02296 2e237999ff9ef8c02222b8a007ad5091 145 Pfam PF07030 Protein of unknown function (DUF1320) 3 124 1.2E-39 T 11-10-2018 IPR009752 Bacteriophage Mu, Gp36 SYN_00754 5967660b631fe8c5a79aa50997174cda 140 Pfam PF05154 TM2 domain 79 125 4.7E-16 T 11-10-2018 IPR007829 TM2 domain SYN_00754 5967660b631fe8c5a79aa50997174cda 140 Pfam PF05154 TM2 domain 14 60 6.1E-12 T 11-10-2018 IPR007829 TM2 domain SYN_01688 b7aa2353343e6bd79d83e31c0fd8f6d9 318 Pfam PF02470 MlaD protein 40 101 3.8E-6 T 11-10-2018 IPR003399 Mce/MlaD SYN_00106 3bd983ca84d183274427b698195b13a8 137 Pfam PF02325 YGGT family 55 125 6.3E-23 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 SYN_00191 224a5ccd08485d1d05ccbb923a10f98c 331 Pfam PF14125 Domain of unknown function (DUF4292) 112 308 4.5E-6 T 11-10-2018 IPR025634 Protein of unknown function DUF4292 SYN_00373 3fe04969ee9668139439cb1125a4f5bd 74 Pfam PF11823 Protein of unknown function (DUF3343) 6 63 2.5E-17 T 11-10-2018 IPR021778 Domain of unknown function DUF3343 SYN_02664 2a5d9a91303aeacc95e03554e782af11 294 Pfam PF01531 Glycosyl transferase family 11 112 283 8.7E-33 T 11-10-2018 IPR002516 Glycosyl transferase, family 11 GO:0005975|GO:0008107|GO:0016020 MetaCyc: PWY-7831|MetaCyc: PWY-7833 SYN_03262 01313451f2bbc2fb8f628f82b53c12f9 105 Pfam PF06634 Protein of unknown function (DUF1156) 11 82 7.7E-36 T 11-10-2018 IPR009537 Domain of unknown function DUF1156 SYN_00781 946bde126baf32e801ee83657df2b149 397 SUPERFAMILY SSF56935 100 368 1.43E-8 T 11-10-2018 SYN_00781 946bde126baf32e801ee83657df2b149 397 Gene3D G3DSA:2.40.170.20 35 297 3.6E-6 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily SYN_00040 05e298e864759f005bb41db323b94a94 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 4 58 2.8E-19 T 11-10-2018 IPR019201 Protein of unknown function DUF2065 SYN_02000 4ffacf2e5c35fcce5e5e63ac5c0dc39a 371 SUPERFAMILY SSF52151 51 346 3.5E-9 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase SYN_00948 7ad912d17a7ed14916ae55e06b68af4a 198 Gene3D G3DSA:2.60.450.10 78 198 3.4E-6 T 11-10-2018 SYN_00948 7ad912d17a7ed14916ae55e06b68af4a 198 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 24 196 4.0E-35 T 11-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 SYN_00948 7ad912d17a7ed14916ae55e06b68af4a 198 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 27 196 6.3E-31 T 11-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related SYN_02375 1f8f0038f4dd14f77a943b6ea426aa68 190 Pfam PF04390 Lipopolysaccharide-assembly 52 183 3.9E-14 T 11-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 SYN_02669 11cfe8bddf67f006860a81a300c258d9 366 Pfam PF00953 Glycosyl transferase family 4 98 252 3.0E-37 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 SYN_03078 af1ba5b5385a42cbb5a4077327173d7b 165 Pfam PF01384 Phosphate transporter family 2 153 1.9E-50 T 11-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 SYN_01305 7ab0f2dae0c54e9074c91dd5a0a9c299 169 Pfam PF01844 HNH endonuclease 71 119 6.8E-8 T 11-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 SYN_02698 0b869614646c45ed08965da7c082a947 226 Pfam PF07238 PilZ domain 109 207 4.0E-6 T 11-10-2018 IPR009875 PilZ domain GO:0035438 SYN_01866 a31982492de7ecf1da6c0a32652d402c 673 ProSitePatterns PS00250 TGF-beta family signature. 430 445 - T 11-10-2018 IPR017948 Transforming growth factor beta, conserved site GO:0008083 SYN_01931 925df4da86db460ae8844931c9b77129 1185 Pfam PF05359 Domain of Unknown Function (DUF748) 159 313 6.0E-26 T 11-10-2018 IPR008023 Protein of unknown function DUF748 SYN_01931 925df4da86db460ae8844931c9b77129 1185 Pfam PF05359 Domain of Unknown Function (DUF748) 534 686 1.7E-31 T 11-10-2018 IPR008023 Protein of unknown function DUF748 SYN_01931 925df4da86db460ae8844931c9b77129 1185 Pfam PF05359 Domain of Unknown Function (DUF748) 786 932 2.6E-36 T 11-10-2018 IPR008023 Protein of unknown function DUF748 SYN_01931 925df4da86db460ae8844931c9b77129 1185 Pfam PF05359 Domain of Unknown Function (DUF748) 367 452 7.3E-10 T 11-10-2018 IPR008023 Protein of unknown function DUF748 SYN_00618 7e6353d35b0ffa20c4073a855a70c5a2 298 Pfam PF02596 Uncharacterised ArCR, COG2043 64 269 2.6E-38 T 11-10-2018 IPR003748 Protein of unknown function DUF169 SYN_01406 ee3fe2f987fd52fa00a3309f00357826 134 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 3 107 1.6E-29 T 11-10-2018 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV SYN_00009 9cb599e508461c8d673ca6b7517e597a 203 Pfam PF14103 Domain of unknown function (DUF4276) 14 181 1.4E-8 T 11-10-2018 IPR025455 Protein of unknown function DUF4276 SYN_01442 ca2a9937167a58e1bfae960a28023393 313 Pfam PF04332 Protein of unknown function (DUF475) 21 301 5.8E-46 T 11-10-2018 IPR007427 Protein of unknown function DUF475 SYN_02282 eef3a1c02f30144b1d82658763c94e62 167 Pfam PF14301 Domain of unknown function (DUF4376) 60 158 3.3E-26 T 11-10-2018 IPR025484 Domain of unknown function DUF4376 SYN_00648 158b74480a2105bd9da13089d31c4150 140 Pfam PF03640 Secreted repeat of unknown function 89 131 2.2E-15 T 11-10-2018 IPR005297 Lipoprotein repeat SYN_00648 158b74480a2105bd9da13089d31c4150 140 Pfam PF03640 Secreted repeat of unknown function 36 71 8.4E-10 T 11-10-2018 IPR005297 Lipoprotein repeat SYN_01381 ee541690e17295cfaa7753f875a67c62 74 Pfam PF01610 Transposase 3 61 2.8E-21 T 11-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SYN_01488 e943cdde48cea32b59bef49b28173487 56 Pfam PF04964 Flp/Fap pilin component 7 50 4.3E-19 T 11-10-2018 IPR007047 Flp/Fap pilin component SYN_00516 9813e0a2178f9e62e964d2c8b9b0f2ea 290 SUPERFAMILY SSF51161 21 98 4.87E-6 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily SYN_01846 4ab345ac43a7721c5376f43018c8d33d 389 Pfam PF14236 Domain of unknown function (DUF4338) 39 333 8.2E-82 T 11-10-2018 IPR025639 Domain of unknown function DUF4338 SYN_02310 ee2087c7a07eeccfb7917ce22a51b027 83 Pfam PF11753 Protein of unknwon function (DUF3310) 14 70 2.4E-16 T 11-10-2018 IPR021739 SaV-like