C1A40_00005 SM00382 ATPases associated with a variety of cellular activities C1A40_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain C1A40_00010 SM00226 Low molecular weight phosphatase family C1A40_00040 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C1A40_00045 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C1A40_00075 SM00732 Likely ribonuclease with RNase H fold. C1A40_00175 SM00382 ATPases associated with a variety of cellular activities C1A40_00195 SM00487 DEAD-like helicases superfamily C1A40_00195 SM00490 helicase superfamily c-terminal domain C1A40_00215 SM00363 S4 RNA-binding domain C1A40_00250 SM00345 helix_turn_helix gluconate operon transcriptional repressor C1A40_00310 SM00382 ATPases associated with a variety of cellular activities C1A40_00310 SM01086 C-terminal, D2-small domain, of ClpB protein C1A40_00315 SM01133 C1A40_00315 C1A40_00320 SM01133 C1A40_00320 C1A40_00340 SM00797 Allophanate hydrolase subunit 2 C1A40_00345 SM00796 Allophanate hydrolase subunit 1 C1A40_00375 SM00382 ATPases associated with a variety of cellular activities C1A40_00385 SM00382 ATPases associated with a variety of cellular activities C1A40_00390 SM00382 ATPases associated with a variety of cellular activities C1A40_00430 SM00100 Cyclic nucleotide-monophosphate binding domain C1A40_00430 SM00419 helix_turn_helix, cAMP Regulatory protein C1A40_00455 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C1A40_00465 SM00852 Probable molybdopterin binding domain C1A40_00515 SM00852 Probable molybdopterin binding domain C1A40_00520 SM00729 Elongator protein 3, MiaB family, Radical SAM C1A40_00590 SM00116 Domain in cystathionine beta-synthase and other proteins. C1A40_00590 SM01240 C1A40_00590 C1A40_00605 SM00752 Horizontally Transferred TransMembrane Domain C1A40_00685 SM01323 C1A40_00685 C1A40_00700 SM00382 ATPases associated with a variety of cellular activities C1A40_00705 SM00712 DNA/RNA-binding repeats in PUR-alpha/beta/gamma and in hypothetical proteins from spirochetes and the Bacteroides-Cytophaga-Flexibacter bacteria. C1A40_00710 SM00563 Phosphate acyltransferases C1A40_00740 SM00341 Helicase and RNase D C-terminal C1A40_00740 SM00487 DEAD-like helicases superfamily C1A40_00740 SM00490 helicase superfamily c-terminal domain C1A40_00740 SM00956 C1A40_00740 C1A40_00760 SM00382 ATPases associated with a variety of cellular activities C1A40_00995 SM00382 ATPases associated with a variety of cellular activities C1A40_01020 SM00382 ATPases associated with a variety of cellular activities C1A40_01055 SM00487 DEAD-like helicases superfamily C1A40_01055 SM00490 helicase superfamily c-terminal domain C1A40_01095 SM01235 C1A40_01095 C1A40_01145 SM00245 tail specific protease C1A40_01150 SM00245 tail specific protease C1A40_01190 SM00855 Phosphoglycerate mutase family C1A40_01215 SM00382 ATPases associated with a variety of cellular activities C1A40_01220 SM00028 Tetratricopeptide repeats C1A40_01245 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C1A40_01245 SM01209 C1A40_01245 C1A40_01275 SM00729 Elongator protein 3, MiaB family, Radical SAM C1A40_01320 SM00382 ATPases associated with a variety of cellular activities C1A40_01375 SM00347 helix_turn_helix multiple antibiotic resistance protein C1A40_01400 SM01211 C1A40_01400 C1A40_01415 SM00382 ATPases associated with a variety of cellular activities C1A40_01445 SM00357 Cold shock protein domain C1A40_01445 SM00382 ATPases associated with a variety of cellular activities C1A40_01445 SM00959 Rho termination factor, N-terminal domain C1A40_01485 SM00946 Prolyl-tRNA synthetase, C-terminal C1A40_01505 SM00840 C1A40_01505 C1A40_01510 SM01234 C1A40_01510 C1A40_01560 SM00967 RNA 2'-O ribose methyltransferase substrate binding C1A40_01585 SM00957 SecA DEAD-like domain C1A40_01585 SM00958 SecA preprotein cross-linking domain C1A40_01590 SM00710 Parallel beta-helix repeats C1A40_01635 SM00729 Elongator protein 3, MiaB family, Radical SAM C1A40_01640 SM00382 ATPases associated with a variety of cellular activities C1A40_01640 SM00962 SRP54-type protein, GTPase domain C1A40_01640 SM00963 SRP54-type protein, helical bundle domain C1A40_01660 SM00852 Probable molybdopterin binding domain C1A40_01675 SM00479 C1A40_01675 C1A40_01700 SM00493 C1A40_01700 C1A40_01750 SM00729 Elongator protein 3, MiaB family, Radical SAM C1A40_01755 SM00487 DEAD-like helicases superfamily C1A40_01755 SM00490 helicase superfamily c-terminal domain C1A40_01825 SM00642 Alpha-amylase domain C1A40_01830 SM00642 Alpha-amylase domain C1A40_01835 SM00642 Alpha-amylase domain C1A40_01860 SM00354 helix_turn _helix lactose operon repressor C1A40_01880 SM00642 Alpha-amylase domain C1A40_01910 SM00047 Lysozyme subfamily 2 C1A40_01910 SM00257 Lysin motif C1A40_01950 SM00450 Rhodanese Homology Domain C1A40_01965 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain C1A40_01975 SM00422 helix_turn_helix, mercury resistance C1A40_01995 SM00635 Bacterial Ig-like domain 2 C1A40_02085 SM00060 Fibronectin type 3 domain C1A40_02085 SM00656 C1A40_02085 C1A40_02110 SM00710 Parallel beta-helix repeats C1A40_02135 SM00635 Bacterial Ig-like domain 2 C1A40_02150 SM00354 helix_turn _helix lactose operon repressor C1A40_02155 SM00858 C1A40_02155 C1A40_02200 SM01217 C1A40_02200 C1A40_02205 SM00758 C1A40_02205 C1A40_02270 SM00327 von Willebrand factor (vWF) type A domain C1A40_02275 SM00028 Tetratricopeptide repeats C1A40_02275 SM00327 von Willebrand factor (vWF) type A domain C1A40_02285 SM00028 Tetratricopeptide repeats C1A40_02360 SM00364 Leucine-rich repeats, bacterial type C1A40_02500 SM00729 Elongator protein 3, MiaB family, Radical SAM C1A40_02505 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C1A40_02510 SM00028 Tetratricopeptide repeats C1A40_02510 SM00387 Histidine kinase-like ATPases C1A40_02510 SM00388 His Kinase A (phosphoacceptor) domain C1A40_02510 SM00448 cheY-homologous receiver domain C1A40_02650 SM00248 ankyrin repeats C1A40_02695 SM00487 DEAD-like helicases superfamily C1A40_02695 SM00490 helicase superfamily c-terminal domain C1A40_02725 SM00729 Elongator protein 3, MiaB family, Radical SAM C1A40_02735 SM00341 Helicase and RNase D C-terminal C1A40_02735 SM00487 DEAD-like helicases superfamily C1A40_02735 SM00490 helicase superfamily c-terminal domain C1A40_02735 SM00956 C1A40_02735 C1A40_02740 SM00563 Phosphate acyltransferases C1A40_03020 SM01252 C1A40_03020 C1A40_03145 SM00231 Coagulation factor 5/8 C-terminal domain, discoidin domain C1A40_03145 SM00635 Bacterial Ig-like domain 2 C1A40_03150 SM00635 Bacterial Ig-like domain 2 C1A40_03180 SM01091 Transporter associated domain C1A40_03195 SM00028 Tetratricopeptide repeats C1A40_03215 SM00641 Glycosyl hydrolases family 25 C1A40_03325 SM00470 ParB-like nuclease domain C1A40_03370 SM00853 MutL C terminal dimerisation domain C1A40_03370 SM01340 C1A40_03370 C1A40_03405 SM00357 Cold shock protein domain C1A40_03410 SM00562 C1A40_03410 C1A40_03475 SM00387 Histidine kinase-like ATPases C1A40_03475 SM00433 TopoisomeraseII C1A40_03495 SM00845 GatB domain C1A40_03515 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C1A40_03515 SM00387 Histidine kinase-like ATPases C1A40_03515 SM00388 His Kinase A (phosphoacceptor) domain C1A40_03565 SM00363 S4 RNA-binding domain C1A40_03600 SM00382 ATPases associated with a variety of cellular activities C1A40_03600 SM00962 SRP54-type protein, GTPase domain C1A40_03600 SM00963 SRP54-type protein, helical bundle domain C1A40_03620 SM00836 DALR anticodon binding domain C1A40_03620 SM01016 Arginyl tRNA synthetase N terminal dom C1A40_03625 SM00028 Tetratricopeptide repeats C1A40_03625 SM00387 Histidine kinase-like ATPases C1A40_03625 SM00388 His Kinase A (phosphoacceptor) domain C1A40_03670 SM01192 C1A40_03670 C1A40_03670 SM01193 C1A40_03670 C1A40_03675 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain C1A40_03685 SM00662 RNA polymerases D C1A40_03690 SM00363 S4 RNA-binding domain C1A40_03690 SM01390 C1A40_03690 C1A40_03760 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. C1A40_03765 SM01374 C1A40_03765 C1A40_03785 SM00322 K homology RNA-binding domain C1A40_03800 SM01382 C1A40_03800 C1A40_03800 SM01383 C1A40_03800 C1A40_03820 SM01403 C1A40_03820 C1A40_03825 SM00838 Elongation factor G C-terminus C1A40_03825 SM00889 Elongation factor G, domain IV C1A40_03875 SM00967 RNA 2'-O ribose methyltransferase substrate binding C1A40_03885 SM00382 ATPases associated with a variety of cellular activities C1A40_03925 SM00028 Tetratricopeptide repeats C1A40_03930 SM01359 C1A40_03930 C1A40_03930 SM01360 C1A40_03930 C1A40_03950 SM00822 C1A40_03950 C1A40_03980 SM01001 AIR carboxylase C1A40_04025 SM00477 DNA/RNA non-specific endonuclease C1A40_04025 SM00892 DNA/RNA non-specific endonuclease C1A40_04040 SM00382 ATPases associated with a variety of cellular activities C1A40_04260 SM00465 GIY-YIG type nucleases (URI domain) C1A40_04320 SM00382 ATPases associated with a variety of cellular activities C1A40_04425 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C1A40_04425 SM00245 tail specific protease C1A40_04450 SM00116 Domain in cystathionine beta-synthase and other proteins. C1A40_04460 SM00382 ATPases associated with a variety of cellular activities C1A40_04530 SM00938 Nitrogen regulatory protein P-II C1A40_04555 SM00606 Cellulose Binding Domain Type IV C1A40_04555 SM00607 eel-Fucolectin Tachylectin-4 Pentaxrin-1 Domain C1A40_04580 SM00563 Phosphate acyltransferases C1A40_04610 SM00342 helix_turn_helix, arabinose operon control protein C1A40_04610 SM00387 Histidine kinase-like ATPases C1A40_04610 SM00388 His Kinase A (phosphoacceptor) domain C1A40_04610 SM00448 cheY-homologous receiver domain C1A40_04625 SM01217 C1A40_04625 C1A40_04635 SM01217 C1A40_04635 C1A40_04650 SM01400 C1A40_04650 C1A40_04685 SM00904 Riboflavin kinase C1A40_04690 SM00752 Horizontally Transferred TransMembrane Domain C1A40_04700 SM00028 Tetratricopeptide repeats C1A40_04710 SM00650 Ribosomal RNA adenine dimethylases C1A40_04715 SM00116 Domain in cystathionine beta-synthase and other proteins. C1A40_04715 SM00924 MgtE intracellular N domain C1A40_04725 SM00072 Guanylate kinase homologues. C1A40_04755 SM00382 ATPases associated with a variety of cellular activities C1A40_04755 SM00994 ClpX C4-type zinc finger C1A40_04755 SM01086 C-terminal, D2-small domain, of ClpB protein C1A40_04810 SM00935 Outer membrane protein (OmpH-like) C1A40_04815 SM00935 Outer membrane protein (OmpH-like) C1A40_04835 SM00932 Scaffold protein Nfu/NifU N terminal C1A40_04875 SM00382 ATPases associated with a variety of cellular activities C1A40_04950 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C1A40_04955 SM00919 Malic enzyme, NAD binding domain C1A40_04955 SM01274 C1A40_04955 C1A40_04970 SM00382 ATPases associated with a variety of cellular activities C1A40_05035 SM00322 K homology RNA-binding domain C1A40_05075 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs C1A40_05075 SM00474 3'-5' exonuclease C1A40_05075 SM00475 5'-3' exonuclease C1A40_05075 SM00482 DNA polymerase A domain C1A40_05090 SM00487 DEAD-like helicases superfamily C1A40_05090 SM00490 helicase superfamily c-terminal domain C1A40_05110 SM00382 ATPases associated with a variety of cellular activities C1A40_05140 SM00354 helix_turn _helix lactose operon repressor C1A40_05175 SM00342 helix_turn_helix, arabinose operon control protein C1A40_05175 SM00387 Histidine kinase-like ATPases C1A40_05175 SM00388 His Kinase A (phosphoacceptor) domain C1A40_05175 SM00448 cheY-homologous receiver domain C1A40_05190 SM00345 helix_turn_helix gluconate operon transcriptional repressor C1A40_05190 SM00895 C1A40_05190 C1A40_05200 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins C1A40_05225 SM00710 Parallel beta-helix repeats C1A40_05260 SM00248 ankyrin repeats C1A40_05280 SM00530 Helix-turn-helix XRE-family like proteins C1A40_05295 SM00257 Lysin motif C1A40_05315 SM00530 Helix-turn-helix XRE-family like proteins C1A40_05320 SM00400 zinc finger C1A40_05515 SM00487 DEAD-like helicases superfamily C1A40_05560 SM00487 DEAD-like helicases superfamily C1A40_05560 SM00490 helicase superfamily c-terminal domain C1A40_05635 SM00533 DNA-binding domain of DNA mismatch repair MUTS family C1A40_05635 SM00534 ATPase domain of DNA mismatch repair MUTS family C1A40_05735 SM00947 Carbonic anhydrase C1A40_05750 SM00028 Tetratricopeptide repeats C1A40_05750 SM00287 Bacterial SH3 domain homologues C1A40_05760 SM00028 Tetratricopeptide repeats C1A40_05765 SM00327 von Willebrand factor (vWF) type A domain C1A40_05770 SM00327 von Willebrand factor (vWF) type A domain C1A40_05860 SM00861 Transketolase, pyrimidine binding domain C1A40_05865 SM01126 C1A40_05865 C1A40_05875 SM00529 Helix-turn-helix diphteria tox regulatory element C1A40_05875 SM00899 C1A40_05875 C1A40_05880 SM00529 Helix-turn-helix diphteria tox regulatory element C1A40_05895 SM00487 DEAD-like helicases superfamily C1A40_05895 SM00490 helicase superfamily c-terminal domain C1A40_05895 SM00982 C1A40_05895 C1A40_05895 SM01058 CarD-like/TRCF domain C1A40_05900 SM00448 cheY-homologous receiver domain C1A40_05910 SM00387 Histidine kinase-like ATPases C1A40_05910 SM00388 His Kinase A (phosphoacceptor) domain C1A40_05920 SM00316 Ribosomal protein S1-like RNA-binding domain C1A40_05920 SM00732 Likely ribonuclease with RNase H fold. C1A40_05960 SM00271 DnaJ molecular chaperone homology domain C1A40_05970 SM00563 Phosphate acyltransferases C1A40_05980 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C1A40_05985 SM00342 helix_turn_helix, arabinose operon control protein C1A40_06020 SM00382 ATPases associated with a variety of cellular activities C1A40_06085 SM00563 Phosphate acyltransferases C1A40_06145 SM00028 Tetratricopeptide repeats C1A40_06160 SM00465 GIY-YIG type nucleases (URI domain) C1A40_06230 SM00382 ATPases associated with a variety of cellular activities C1A40_06295 SM00382 ATPases associated with a variety of cellular activities C1A40_06315 SM00878 Biotin carboxylase C-terminal domain C1A40_06355 SM00487 DEAD-like helicases superfamily C1A40_06380 SM00465 GIY-YIG type nucleases (URI domain) C1A40_06380 SM00497 Intron encoded nuclease repeat motif C1A40_06430 SM00530 Helix-turn-helix XRE-family like proteins C1A40_06485 SM00935 Outer membrane protein (OmpH-like) C1A40_06495 SM01228 C1A40_06495 C1A40_06530 SM00244 prohibitin homologues C1A40_06555 SM00905 Dihydroneopterin aldolase C1A40_06570 SM01217 C1A40_06570 C1A40_06575 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins C1A40_06595 SM00421 helix_turn_helix, Lux Regulon C1A40_06610 SM00316 Ribosomal protein S1-like RNA-binding domain C1A40_06610 SM00357 Cold shock protein domain C1A40_06610 SM00955 C1A40_06610 C1A40_06650 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C1A40_06650 SM00245 tail specific protease C1A40_06665 SM00876 Biotin and Thiamin Synthesis associated domain C1A40_06720 SM00849 Metallo-beta-lactamase superfamily C1A40_06760 SM00642 Alpha-amylase domain C1A40_06785 SM00060 Fibronectin type 3 domain C1A40_06805 SM00257 Lysin motif C1A40_06900 SM00858 C1A40_06900 C1A40_06970 SM01209 C1A40_06970 C1A40_06970 SM01210 C1A40_06970 C1A40_07025 SM00342 helix_turn_helix, arabinose operon control protein C1A40_07065 SM01004 Delta-aminolevulinic acid dehydratase C1A40_07090 SM00116 Domain in cystathionine beta-synthase and other proteins. C1A40_07110 SM00382 ATPases associated with a variety of cellular activities C1A40_07115 SM00882 Coenzyme A transferase C1A40_07125 SM00882 Coenzyme A transferase C1A40_07165 SM00450 Rhodanese Homology Domain C1A40_07170 SM00382 ATPases associated with a variety of cellular activities C1A40_07250 SM00387 Histidine kinase-like ATPases C1A40_07250 SM00388 His Kinase A (phosphoacceptor) domain C1A40_07265 SM00382 ATPases associated with a variety of cellular activities C1A40_07270 SM00859 Semialdehyde dehydrogenase, NAD binding domain C1A40_07280 SM01005 Alanine racemase, C-terminal domain C1A40_07305 SM00986 Uracil DNA glycosylase superfamily C1A40_07305 SM00987 UreE urease accessory protein, C-terminal domain C1A40_07310 SM00530 Helix-turn-helix XRE-family like proteins C1A40_07380 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. C1A40_07385 SM01126 C1A40_07385 C1A40_07455 SM00563 Phosphate acyltransferases C1A40_07470 SM00825 Beta-ketoacyl synthase C1A40_07475 SM00822 C1A40_07475 C1A40_07500 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C1A40_07595 SM00671 Sel1-like repeats. C1A40_07620 SM00606 Cellulose Binding Domain Type IV C1A40_07650 SM00825 Beta-ketoacyl synthase C1A40_07655 SM00358 Double-stranded RNA binding motif C1A40_07655 SM00535 Ribonuclease III family C1A40_07685 SM01118 C1A40_07685 C1A40_07715 SM00560 LamG-like jellyroll fold domain C1A40_07725 SM00729 Elongator protein 3, MiaB family, Radical SAM C1A40_07725 SM00876 Biotin and Thiamin Synthesis associated domain C1A40_07730 SM00825 Beta-ketoacyl synthase C1A40_07780 SM00899 C1A40_07780 C1A40_07795 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C1A40_07830 SM00382 ATPases associated with a variety of cellular activities C1A40_07855 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C1A40_07890 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. C1A40_07895 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C1A40_07915 SM00382 ATPases associated with a variety of cellular activities C1A40_07935 SM00861 Transketolase, pyrimidine binding domain C1A40_07945 SM00421 helix_turn_helix, Lux Regulon C1A40_07945 SM00448 cheY-homologous receiver domain C1A40_07960 SM00870 C1A40_07960 C1A40_08060 SM00382 ATPases associated with a variety of cellular activities C1A40_08065 SM00729 Elongator protein 3, MiaB family, Radical SAM C1A40_08115 SM00479 C1A40_08115 C1A40_08115 SM00481 DNA polymerase alpha chain like domain C1A40_08170 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins C1A40_08175 SM00354 helix_turn _helix lactose operon repressor C1A40_08185 SM00382 ATPases associated with a variety of cellular activities C1A40_08205 SM00387 Histidine kinase-like ATPases C1A40_08210 SM00448 cheY-homologous receiver domain C1A40_08240 SM00729 Elongator protein 3, MiaB family, Radical SAM C1A40_08260 SM00782 PhnA Zinc-Ribbon C1A40_08335 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C1A40_08380 SM00342 helix_turn_helix, arabinose operon control protein C1A40_08495 SM00861 Transketolase, pyrimidine binding domain C1A40_08600 SM00363 S4 RNA-binding domain C1A40_08615 SM00382 ATPases associated with a variety of cellular activities C1A40_08665 SM00606 Cellulose Binding Domain Type IV C1A40_08665 SM00635 Bacterial Ig-like domain 2 C1A40_08760 SM00450 Rhodanese Homology Domain C1A40_08855 SM00382 ATPases associated with a variety of cellular activities C1A40_08910 SM00450 Rhodanese Homology Domain C1A40_08925 SM01011 Aminopeptidase P, N-terminal domain C1A40_08990 SM00411 bacterial (prokaryotic) histone like domain C1A40_08995 SM00478 endonuclease III C1A40_09010 SM01091 Transporter associated domain C1A40_09025 SM00959 Rho termination factor, N-terminal domain C1A40_09035 SM00028 Tetratricopeptide repeats C1A40_09035 SM00421 helix_turn_helix, Lux Regulon C1A40_09075 SM00996 S-adenosyl-L-homocysteine hydrolase C1A40_09075 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain C1A40_09145 SM00387 Histidine kinase-like ATPases C1A40_09145 SM00388 His Kinase A (phosphoacceptor) domain C1A40_09225 SM01002 Alanine dehydrogenase/PNT, C-terminal domain C1A40_09225 SM01003 Alanine dehydrogenase/PNT, N-terminal domain C1A40_09235 SM00534 ATPase domain of DNA mismatch repair MUTS family C1A40_09260 SM00344 helix_turn_helix ASNC type C1A40_09340 SM00448 cheY-homologous receiver domain C1A40_09340 SM00862 Transcriptional regulatory protein, C terminal C1A40_09345 SM00387 Histidine kinase-like ATPases C1A40_09345 SM00388 His Kinase A (phosphoacceptor) domain C1A40_09420 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. C1A40_09455 SM00893 Electron transfer flavoprotein domain C1A40_09460 SM00893 Electron transfer flavoprotein domain C1A40_09470 SM00861 Transketolase, pyrimidine binding domain C1A40_09560 SM00859 Semialdehyde dehydrogenase, NAD binding domain C1A40_09620 SM01329 C1A40_09620 C1A40_09730 SM01018 B12 binding domain C1A40_09765 SM00382 ATPases associated with a variety of cellular activities C1A40_09785 SM00830 Chorismate mutase type II C1A40_09870 SM00460 Transglutaminase/protease-like homologues C1A40_09885 SM00400 zinc finger C1A40_09885 SM00493 C1A40_09885 C1A40_09890 SM00421 helix_turn_helix, Lux Regulon C1A40_09890 SM00448 cheY-homologous receiver domain C1A40_09935 SM00268 Actin C1A40_09940 SM00798 AICARFT/IMPCHase bienzyme C1A40_09940 SM00851 MGS-like domain C1A40_09990 SM00883 Chaperonin 10 Kd subunit C1A40_10010 SM00382 ATPases associated with a variety of cellular activities C1A40_10015 SM00729 Elongator protein 3, MiaB family, Radical SAM C1A40_10025 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain C1A40_10025 SM00437 Bacterial DNA topoisomerase I DNA-binding domain C1A40_10025 SM00493 C1A40_10025 C1A40_10065 SM00382 ATPases associated with a variety of cellular activities C1A40_10130 SM00382 ATPases associated with a variety of cellular activities C1A40_10215 SM00382 ATPases associated with a variety of cellular activities C1A40_10265 SM00740 C1A40_10265 C1A40_10270 SM00363 S4 RNA-binding domain C1A40_10280 SM01126 C1A40_10280 C1A40_10405 SM00465 GIY-YIG type nucleases (URI domain) C1A40_10425 SM00984 UDP binding domain C1A40_10455 SM00530 Helix-turn-helix XRE-family like proteins C1A40_10475 SM01002 Alanine dehydrogenase/PNT, C-terminal domain C1A40_10475 SM01003 Alanine dehydrogenase/PNT, N-terminal domain C1A40_10575 SM00382 ATPases associated with a variety of cellular activities C1A40_10580 SM00028 Tetratricopeptide repeats C1A40_10695 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. C1A40_10695 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. C1A40_10700 SM00649 Ribosomal protein L11/L12 C1A40_10725 SM00663 RNA polymerase I subunit A N-terminus C1A40_10920 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C1A40_10920 SM00245 tail specific protease C1A40_10995 SM00842 Cell division protein FtsA C1A40_11000 SM00864 Tubulin/FtsZ family, GTPase domain C1A40_11000 SM00865 Tubulin/FtsZ family, C-terminal domain C1A40_11060 SM00487 DEAD-like helicases superfamily C1A40_11180 SM00382 ATPases associated with a variety of cellular activities C1A40_11195 SM00825 Beta-ketoacyl synthase C1A40_11210 SM00825 Beta-ketoacyl synthase C1A40_11255 SM01034 Sensors of blue-light using FAD C1A40_11280 SM00316 Ribosomal protein S1-like RNA-binding domain C1A40_11280 SM00322 K homology RNA-binding domain C1A40_11285 SM01387 C1A40_11285 C1A40_11290 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C1A40_11290 SM00091 PAS domain C1A40_11290 SM00387 Histidine kinase-like ATPases C1A40_11350 SM00028 Tetratricopeptide repeats C1A40_11395 SM00900 C1A40_11395 C1A40_11485 SM00450 Rhodanese Homology Domain C1A40_11490 SM00450 Rhodanese Homology Domain C1A40_11520 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain C1A40_11520 SM00437 Bacterial DNA topoisomerase I DNA-binding domain C1A40_11520 SM00493 C1A40_11520 C1A40_11565 SM00448 cheY-homologous receiver domain C1A40_11565 SM00850 LytTr DNA-binding domain C1A40_11635 SM00729 Elongator protein 3, MiaB family, Radical SAM C1A40_11700 SM00100 Cyclic nucleotide-monophosphate binding domain C1A40_11700 SM00419 helix_turn_helix, cAMP Regulatory protein C1A40_11755 SM00382 ATPases associated with a variety of cellular activities C1A40_11835 SM00450 Rhodanese Homology Domain C1A40_11835 SM00849 Metallo-beta-lactamase superfamily C1A40_11915 SM00382 ATPases associated with a variety of cellular activities C1A40_12150 SM00382 ATPases associated with a variety of cellular activities C1A40_12150 SM01086 C-terminal, D2-small domain, of ClpB protein C1A40_12180 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins C1A40_12300 SM00322 K homology RNA-binding domain C1A40_12300 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C1A40_12365 SM00344 helix_turn_helix ASNC type C1A40_12370 SM00382 ATPases associated with a variety of cellular activities C1A40_12370 SM01086 C-terminal, D2-small domain, of ClpB protein C1A40_12375 SM00434 DNA Topoisomerase IV C1A40_12380 SM00028 Tetratricopeptide repeats C1A40_12395 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C1A40_12410 SM00028 Tetratricopeptide repeats C1A40_12420 SM00829 Enoylreductase C1A40_12445 SM01217 C1A40_12445 C1A40_12450 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C1A40_12490 SM00635 Bacterial Ig-like domain 2 C1A40_12495 SM00342 helix_turn_helix, arabinose operon control protein C1A40_12525 SM01217 C1A40_12525 C1A40_12560 SM00346 helix_turn_helix isocitrate lyase regulation C1A40_12565 SM00606 Cellulose Binding Domain Type IV C1A40_12575 SM00829 Enoylreductase C1A40_12595 SM00342 helix_turn_helix, arabinose operon control protein C1A40_12605 SM00984 UDP binding domain C1A40_12640 SM00886 Stress responsive A/B Barrel Domain C1A40_12740 SM00646 C1A40_12740 C1A40_12795 SM00345 helix_turn_helix gluconate operon transcriptional repressor C1A40_12800 SM00342 helix_turn_helix, arabinose operon control protein C1A40_12800 SM00387 Histidine kinase-like ATPases C1A40_12800 SM00388 His Kinase A (phosphoacceptor) domain C1A40_12800 SM00448 cheY-homologous receiver domain C1A40_12820 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. C1A40_12840 SM01217 C1A40_12840 C1A40_13000 SM01217 C1A40_13000 C1A40_13150 SM00342 helix_turn_helix, arabinose operon control protein C1A40_13150 SM00387 Histidine kinase-like ATPases C1A40_13150 SM00388 His Kinase A (phosphoacceptor) domain C1A40_13150 SM00448 cheY-homologous receiver domain C1A40_13170 SM00354 helix_turn _helix lactose operon repressor C1A40_13205 SM01007 Class II Aldolase and Adducin N-terminal domain C1A40_13220 SM01007 Class II Aldolase and Adducin N-terminal domain C1A40_13280 SM00411 bacterial (prokaryotic) histone like domain C1A40_13290 SM00487 DEAD-like helicases superfamily C1A40_13290 SM00490 helicase superfamily c-terminal domain C1A40_13335 SM00387 Histidine kinase-like ATPases C1A40_13380 SM00060 Fibronectin type 3 domain C1A40_13380 SM00656 C1A40_13380 C1A40_13380 SM00710 Parallel beta-helix repeats C1A40_13515 SM00422 helix_turn_helix, mercury resistance C1A40_13520 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. C1A40_13590 SM00480 DNA polymerase III beta subunit C1A40_13645 SM01057 Eukaryotic-type carbonic anhydrase C1A40_13670 SM00479 C1A40_13670 C1A40_13675 SM00100 Cyclic nucleotide-monophosphate binding domain C1A40_13675 SM00116 Domain in cystathionine beta-synthase and other proteins. C1A40_13685 SM00382 ATPases associated with a variety of cellular activities C1A40_13710 SM00867 YceI-like domain C1A40_13715 SM00487 DEAD-like helicases superfamily C1A40_13730 SM00878 Biotin carboxylase C-terminal domain C1A40_13740 SM00867 YceI-like domain C1A40_13790 SM00530 Helix-turn-helix XRE-family like proteins C1A40_13815 SM00382 ATPases associated with a variety of cellular activities C1A40_13940 SM00644 C1A40_13940 C1A40_13940 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. C1A40_14065 SM00981 C1A40_14065 C1A40_14115 SM00060 Fibronectin type 3 domain C1A40_14135 SM00382 ATPases associated with a variety of cellular activities C1A40_14140 SM00382 ATPases associated with a variety of cellular activities C1A40_14245 SM00271 DnaJ molecular chaperone homology domain C1A40_14270 SM00382 ATPases associated with a variety of cellular activities C1A40_14290 SM01126 C1A40_14290 C1A40_14300 SM00382 ATPases associated with a variety of cellular activities C1A40_14320 SM00465 GIY-YIG type nucleases (URI domain) C1A40_14320 SM00479 C1A40_14320 C1A40_14325 SM00530 Helix-turn-helix XRE-family like proteins C1A40_14380 SM00873 B3/4 domain C1A40_14380 SM00874 tRNA synthetase B5 domain C1A40_14380 SM00896 Ferredoxin-fold anticodon binding domain C1A40_14395 SM00448 cheY-homologous receiver domain C1A40_14395 SM00850 LytTr DNA-binding domain C1A40_14465 SM00530 Helix-turn-helix XRE-family like proteins C1A40_14530 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C1A40_14540 SM00382 ATPases associated with a variety of cellular activities C1A40_14545 SM01240 C1A40_14545 C1A40_14550 SM00388 His Kinase A (phosphoacceptor) domain C1A40_14560 SM00387 Histidine kinase-like ATPases C1A40_14560 SM00448 cheY-homologous receiver domain C1A40_14575 SM00646 C1A40_14575 C1A40_14620 SM00382 ATPases associated with a variety of cellular activities C1A40_14660 SM00450 Rhodanese Homology Domain C1A40_14670 SM00533 DNA-binding domain of DNA mismatch repair MUTS family C1A40_14670 SM00534 ATPase domain of DNA mismatch repair MUTS family C1A40_14680 SM00487 DEAD-like helicases superfamily C1A40_14680 SM00490 helicase superfamily c-terminal domain C1A40_14755 SM00986 Uracil DNA glycosylase superfamily C1A40_14755 SM00987 UreE urease accessory protein, C-terminal domain C1A40_14775 SM00849 Metallo-beta-lactamase superfamily C1A40_14785 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C1A40_14820 SM00347 helix_turn_helix multiple antibiotic resistance protein C1A40_14845 SM00382 ATPases associated with a variety of cellular activities C1A40_14895 SM00937 C1A40_14895 C1A40_14990 SM00478 endonuclease III C1A40_15005 SM00849 Metallo-beta-lactamase superfamily C1A40_15020 SM00530 Helix-turn-helix XRE-family like proteins C1A40_15025 SM00631 C1A40_15025 C1A40_15030 SM00344 helix_turn_helix ASNC type C1A40_15085 SM00382 ATPases associated with a variety of cellular activities C1A40_15130 SM00563 Phosphate acyltransferases C1A40_15245 SM00861 Transketolase, pyrimidine binding domain C1A40_15280 SM00382 ATPases associated with a variety of cellular activities C1A40_15305 SM00530 Helix-turn-helix XRE-family like proteins C1A40_15385 SM00829 Enoylreductase C1A40_15400 SM00271 DnaJ molecular chaperone homology domain C1A40_15405 SM00487 DEAD-like helicases superfamily C1A40_15405 SM00490 helicase superfamily c-terminal domain C1A40_15410 SM00487 DEAD-like helicases superfamily C1A40_15410 SM00490 helicase superfamily c-terminal domain C1A40_15440 SM00460 Transglutaminase/protease-like homologues C1A40_15470 SM00357 Cold shock protein domain C1A40_15475 SM00487 DEAD-like helicases superfamily C1A40_15475 SM00490 helicase superfamily c-terminal domain C1A40_15535 SM01329 C1A40_15535 C1A40_15540 SM00917 LeuA allosteric (dimerisation) domain C1A40_15600 SM00465 GIY-YIG type nucleases (URI domain) C1A40_15635 SM00244 prohibitin homologues C1A40_15645 SM00822 C1A40_15645 C1A40_15650 SM00881 CoA binding domain C1A40_15660 SM00841 Elongation factor P, C-terminal C1A40_15660 SM01185 C1A40_15660 C1A40_15680 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C1A40_15685 SM00448 cheY-homologous receiver domain C1A40_15700 SM01002 Alanine dehydrogenase/PNT, C-terminal domain C1A40_15700 SM01003 Alanine dehydrogenase/PNT, N-terminal domain C1A40_15770 SM00316 Ribosomal protein S1-like RNA-binding domain C1A40_15775 SM00257 Lysin motif C1A40_15790 SM00382 ATPases associated with a variety of cellular activities C1A40_15790 SM00464 Found in ATP-dependent protease La (LON) C1A40_15835 SM00382 ATPases associated with a variety of cellular activities C1A40_15850 SM00861 Transketolase, pyrimidine binding domain C1A40_15910 SM00530 Helix-turn-helix XRE-family like proteins C1A40_15930 SM00530 Helix-turn-helix XRE-family like proteins C1A40_15935 SM00966 SpoVT / AbrB like domain C1A40_15945 SM00530 Helix-turn-helix XRE-family like proteins C1A40_15955 SM00382 ATPases associated with a variety of cellular activities C1A40_16070 SM00530 Helix-turn-helix XRE-family like proteins C1A40_16125 SM01007 Class II Aldolase and Adducin N-terminal domain C1A40_16165 SM00813 Alpha-L-arabinofuranosidase C-terminus C1A40_16185 SM00861 Transketolase, pyrimidine binding domain C1A40_16195 SM00213 Ubiquitin homologues C1A40_16205 SM00966 SpoVT / AbrB like domain C1A40_16295 SM00028 Tetratricopeptide repeats C1A40_16305 SM00271 DnaJ molecular chaperone homology domain C1A40_16375 SM00871 Bacterial transcription activator, effector binding domain C1A40_16395 SM00344 helix_turn_helix ASNC type C1A40_16435 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family C1A40_16440 SM00937 C1A40_16440 C1A40_16460 SM01230 C1A40_16460 C1A40_16465 SM01230 C1A40_16465 C1A40_16490 SM00100 Cyclic nucleotide-monophosphate binding domain C1A40_16490 SM00419 helix_turn_helix, cAMP Regulatory protein C1A40_16520 SM00382 ATPases associated with a variety of cellular activities C1A40_16550 SM00257 Lysin motif C1A40_16590 SM00434 DNA Topoisomerase IV C1A40_16595 SM00387 Histidine kinase-like ATPases C1A40_16595 SM00433 TopoisomeraseII C1A40_16610 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C1A40_16635 SM00421 helix_turn_helix, Lux Regulon C1A40_16635 SM00448 cheY-homologous receiver domain C1A40_16645 SM00387 Histidine kinase-like ATPases C1A40_16670 SM00354 helix_turn _helix lactose operon repressor C1A40_16705 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C1A40_16725 SM00977 TilS substrate C-terminal domain C1A40_16740 SM00487 DEAD-like helicases superfamily C1A40_16740 SM00490 helicase superfamily c-terminal domain C1A40_16800 SM00465 GIY-YIG type nucleases (URI domain) C1A40_16800 SM00479 C1A40_16800 C1A40_16810 SM01126 C1A40_16810 C1A40_16815 SM01321 C1A40_16815 C1A40_16840 SM00382 ATPases associated with a variety of cellular activities C1A40_16900 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase C1A40_16905 SM00419 helix_turn_helix, cAMP Regulatory protein C1A40_17015 SM00606 Cellulose Binding Domain Type IV C1A40_17040 SM00710 Parallel beta-helix repeats C1A40_17050 SM00758 C1A40_17050 C1A40_17050 SM01217 C1A40_17050 C1A40_17080 SM00342 helix_turn_helix, arabinose operon control protein C1A40_17080 SM00387 Histidine kinase-like ATPases C1A40_17080 SM00388 His Kinase A (phosphoacceptor) domain C1A40_17080 SM00448 cheY-homologous receiver domain C1A40_17120 SM00248 ankyrin repeats C1A40_17140 SM00843 C1A40_17140 C1A40_17275 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain C1A40_17325 SM00382 ATPases associated with a variety of cellular activities C1A40_17375 SM00382 ATPases associated with a variety of cellular activities C1A40_17375 SM00448 cheY-homologous receiver domain C1A40_17390 SM00382 ATPases associated with a variety of cellular activities C1A40_17400 SM01126 C1A40_17400 C1A40_17420 SM00530 Helix-turn-helix XRE-family like proteins C1A40_17455 SM00014 Acid phosphatase homologues C1A40_17470 SM00606 Cellulose Binding Domain Type IV C1A40_17470 SM00635 Bacterial Ig-like domain 2 C1A40_17515 SM00382 ATPases associated with a variety of cellular activities C1A40_17590 SM00448 cheY-homologous receiver domain C1A40_17590 SM00850 LytTr DNA-binding domain C1A40_17605 SM00560 LamG-like jellyroll fold domain C1A40_17635 SM00448 cheY-homologous receiver domain C1A40_17635 SM00850 LytTr DNA-binding domain C1A40_17640 SM00487 DEAD-like helicases superfamily C1A40_17640 SM00490 helicase superfamily c-terminal domain C1A40_17660 SM00530 Helix-turn-helix XRE-family like proteins C1A40_17680 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C1A40_17680 SM00954 Region found in RelA / SpoT proteins C1A40_17690 SM00788 Adenylosuccinate synthetase C1A40_17705 SM00028 Tetratricopeptide repeats C1A40_17740 SM00382 ATPases associated with a variety of cellular activities C1A40_17750 SM00382 ATPases associated with a variety of cellular activities C1A40_17780 SM00671 Sel1-like repeats. C1A40_17810 SM00487 DEAD-like helicases superfamily C1A40_17925 SM00341 Helicase and RNase D C-terminal C1A40_17925 SM00382 ATPases associated with a variety of cellular activities C1A40_17930 SM00448 cheY-homologous receiver domain C1A40_17930 SM00862 Transcriptional regulatory protein, C terminal C1A40_17935 SM00387 Histidine kinase-like ATPases C1A40_17935 SM00388 His Kinase A (phosphoacceptor) domain C1A40_17975 SM01409 C1A40_17975 C1A40_17985 SM01130 C1A40_17985 C1A40_18010 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C1A40_18010 SM00292 breast cancer carboxy-terminal domain C1A40_18010 SM00532 Ligase N family