TF3313_0006	PWY-5667	CDP-diacylglycerol biosynthesis I
TF3313_0006	PWY-5981	CDP-diacylglycerol biosynthesis III
TF3313_0006	PWY-6453	stigma estolide biosynthesis
TF3313_0006	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
TF3313_0006	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
TF3313_0006	PWY-7587	oleate biosynthesis III (cyanobacteria)
TF3313_0006	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
TF3313_0006	PWY-7782	TF3313_0006
TF3313_0030	PWY-6788	cellulose degradation II (fungi)
TF3313_0053	PWY-6823	molybdenum cofactor biosynthesis
TF3313_0062	PWY-6823	molybdenum cofactor biosynthesis
TF3313_0082	PWY-6823	molybdenum cofactor biosynthesis
TF3313_0092	PWY-6123	inosine-5'-phosphate biosynthesis I
TF3313_0092	PWY-6124	inosine-5'-phosphate biosynthesis II
TF3313_0092	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
TF3313_0092	PWY-7234	inosine-5'-phosphate biosynthesis III
TF3313_0102	PWY-5958	acridone alkaloid biosynthesis
TF3313_0102	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
TF3313_0102	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
TF3313_0112	PWY-101	photosynthesis light reactions
TF3313_0145	PWY-7851	TF3313_0145
TF3313_0182	PWY-2941	L-lysine biosynthesis II
TF3313_0182	PWY-2942	L-lysine biosynthesis III
TF3313_0182	PWY-5097	L-lysine biosynthesis VI
TF3313_0190	PWY-6654	phosphopantothenate biosynthesis III
TF3313_0196	PWY-1042	glycolysis IV (plant cytosol)
TF3313_0196	PWY-5484	glycolysis II (from fructose 6-phosphate)
TF3313_0196	PWY-6886	1-butanol autotrophic biosynthesis
TF3313_0196	PWY-6901	superpathway of glucose and xylose degradation
TF3313_0196	PWY-7003	glycerol degradation to butanol
TF3313_0198	PWY-6167	flavin biosynthesis II (archaea)
TF3313_0198	PWY-6168	flavin biosynthesis III (fungi)
TF3313_0198	PWY-7980	TF3313_0198
TF3313_0199	PWY-1042	glycolysis IV (plant cytosol)
TF3313_0199	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
TF3313_0199	PWY-5484	glycolysis II (from fructose 6-phosphate)
TF3313_0199	PWY-7385	1,3-propanediol biosynthesis (engineered)
TF3313_0209	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
TF3313_0222	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
TF3313_0222	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
TF3313_0223	PWY-2781	<i>cis</i>-zeatin biosynthesis
TF3313_0226	PWY-1042	glycolysis IV (plant cytosol)
TF3313_0226	PWY-5484	glycolysis II (from fructose 6-phosphate)
TF3313_0226	PWY-6901	superpathway of glucose and xylose degradation
TF3313_0226	PWY-7003	glycerol degradation to butanol
TF3313_0242	PWY-3821	galactose degradation III
TF3313_0242	PWY-6317	galactose degradation I (Leloir pathway)
TF3313_0242	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
TF3313_0242	PWY-6527	stachyose degradation
TF3313_0242	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
TF3313_0242	PWY-7344	UDP-D-galactose biosynthesis
TF3313_0252	PWY-4202	arsenate detoxification I (glutaredoxin)
TF3313_0252	PWY-5532	adenosine nucleotides degradation IV
TF3313_0252	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
TF3313_0252	PWY-6608	guanosine nucleotides degradation III
TF3313_0252	PWY-6609	adenine and adenosine salvage III
TF3313_0252	PWY-6611	adenine and adenosine salvage V
TF3313_0252	PWY-6620	guanine and guanosine salvage
TF3313_0252	PWY-6627	salinosporamide A biosynthesis
TF3313_0252	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
TF3313_0252	PWY-7179	purine deoxyribonucleosides degradation I
TF3313_0252	PWY-7179-1	purine deoxyribonucleosides degradation
TF3313_0257	PWY-6807	xyloglucan degradation II (exoglucanase)
TF3313_0261	PWY-7511	protein ubiquitylation
TF3313_0266	PWY-3221	dTDP-L-rhamnose biosynthesis II
TF3313_0266	PWY-6808	dTDP-D-forosamine biosynthesis
TF3313_0266	PWY-6942	dTDP-D-desosamine biosynthesis
TF3313_0266	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
TF3313_0266	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
TF3313_0266	PWY-6974	dTDP-L-olivose biosynthesis
TF3313_0266	PWY-6976	dTDP-L-mycarose biosynthesis
TF3313_0266	PWY-7104	dTDP-L-megosamine biosynthesis
TF3313_0266	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
TF3313_0266	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
TF3313_0266	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
TF3313_0266	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
TF3313_0266	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
TF3313_0266	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
TF3313_0266	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
TF3313_0266	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
TF3313_0266	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
TF3313_0266	PWY-7688	TF3313_0266
TF3313_0266	PWY-7814	TF3313_0266
TF3313_0275	PWY-5155	&beta;-alanine biosynthesis III
TF3313_0277	PWY-622	starch biosynthesis
TF3313_0339	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TF3313_0339	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TF3313_0339	PWY-7953	TF3313_0339
TF3313_0340	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
TF3313_0340	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
TF3313_0340	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
TF3313_0340	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
TF3313_0341	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
TF3313_0341	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
TF3313_0341	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
TF3313_0341	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
TF3313_0342	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TF3313_0342	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TF3313_0343	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
TF3313_0343	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
TF3313_0343	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
TF3313_0351	PWY-6891	thiazole biosynthesis II (Bacillus)
TF3313_0351	PWY-6892	thiazole biosynthesis I (E. coli)
TF3313_0351	PWY-7560	methylerythritol phosphate pathway II
TF3313_0365	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
TF3313_0365	PWY-5723	Rubisco shunt
TF3313_0376	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
TF3313_0387	PWY-6807	xyloglucan degradation II (exoglucanase)
TF3313_0393	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
TF3313_0393	PWY-6855	chitin degradation I (archaea)
TF3313_0393	PWY-6906	chitin derivatives degradation
TF3313_0430	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
TF3313_0430	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
TF3313_0430	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
TF3313_0430	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
TF3313_0433	PWY-5686	UMP biosynthesis
TF3313_0433	PWY-7790	TF3313_0433
TF3313_0433	PWY-7791	TF3313_0433
TF3313_0435	PWY-4983	L-citrulline-nitric oxide cycle
TF3313_0435	PWY-4984	urea cycle
TF3313_0435	PWY-5	canavanine biosynthesis
TF3313_0435	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
TF3313_0435	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
TF3313_0440	PWY-6269	adenosylcobalamin salvage from cobinamide II
TF3313_0440	PWY-7962	TF3313_0440
TF3313_0440	PWY-7971	TF3313_0440
TF3313_0440	PWY-7972	TF3313_0440
TF3313_0447	PWY-4381	fatty acid biosynthesis initiation I
TF3313_0467	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
TF3313_0467	PWY-5723	Rubisco shunt
TF3313_0477	PWY-6891	thiazole biosynthesis II (Bacillus)
TF3313_0477	PWY-6892	thiazole biosynthesis I (E. coli)
TF3313_0477	PWY-7560	methylerythritol phosphate pathway II
TF3313_0502	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
TF3313_0502	PWY-7820	TF3313_0502
TF3313_0518	PWY-7980	TF3313_0518
TF3313_0519	PWY-7980	TF3313_0519
TF3313_0538	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
TF3313_0538	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
TF3313_0540	PWY-5316	nicotine biosynthesis
TF3313_0540	PWY-7342	superpathway of nicotine biosynthesis
TF3313_0605	PWY-6167	flavin biosynthesis II (archaea)
TF3313_0605	PWY-6168	flavin biosynthesis III (fungi)
TF3313_0609	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
TF3313_0610	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
TF3313_0629	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
TF3313_0629	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
TF3313_0630	PWY-6807	xyloglucan degradation II (exoglucanase)
TF3313_0632	PWY-7980	TF3313_0632
TF3313_0639	PWY-7980	TF3313_0639
TF3313_0685	PWY-1042	glycolysis IV (plant cytosol)
TF3313_0685	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
TF3313_0685	PWY-5484	glycolysis II (from fructose 6-phosphate)
TF3313_0685	PWY-5723	Rubisco shunt
TF3313_0685	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
TF3313_0685	PWY-6886	1-butanol autotrophic biosynthesis
TF3313_0685	PWY-6901	superpathway of glucose and xylose degradation
TF3313_0685	PWY-7003	glycerol degradation to butanol
TF3313_0685	PWY-7124	ethylene biosynthesis V (engineered)
TF3313_0685	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
TF3313_0693	PWY-2941	L-lysine biosynthesis II
TF3313_0693	PWY-2942	L-lysine biosynthesis III
TF3313_0693	PWY-5097	L-lysine biosynthesis VI
TF3313_0693	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
TF3313_0693	PWY-6559	spermidine biosynthesis II
TF3313_0693	PWY-6562	norspermidine biosynthesis
TF3313_0693	PWY-7153	grixazone biosynthesis
TF3313_0693	PWY-7977	TF3313_0693
TF3313_0694	PWY-2941	L-lysine biosynthesis II
TF3313_0694	PWY-2942	L-lysine biosynthesis III
TF3313_0694	PWY-5097	L-lysine biosynthesis VI
TF3313_0734	PWY-6164	3-dehydroquinate biosynthesis I
TF3313_0739	PWY-5028	L-histidine degradation II
TF3313_0739	PWY-5030	L-histidine degradation III
TF3313_0743	PWY-5030	L-histidine degradation III
TF3313_0744	PWY-5028	L-histidine degradation II
TF3313_0744	PWY-5030	L-histidine degradation III
TF3313_0746	PWY-5030	L-histidine degradation III
TF3313_0746	PWY-5497	purine nucleobases degradation II (anaerobic)
TF3313_0747	PWY-5028	L-histidine degradation II
TF3313_0747	PWY-5030	L-histidine degradation III
TF3313_0753	PWY-6348	phosphate acquisition
TF3313_0759	PWY-6317	galactose degradation I (Leloir pathway)
TF3313_0761	PWY-5316	nicotine biosynthesis
TF3313_0761	PWY-7342	superpathway of nicotine biosynthesis
TF3313_0786	PWY-3861	mannitol degradation II
TF3313_0786	PWY-3881	mannitol biosynthesis
TF3313_0786	PWY-5659	GDP-mannose biosynthesis
TF3313_0786	PWY-6992	1,5-anhydrofructose degradation
TF3313_0786	PWY-7456	mannan degradation
TF3313_0786	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
TF3313_0786	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
TF3313_0787	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
TF3313_0787	PWY-622	starch biosynthesis
TF3313_0787	PWY-7900	TF3313_0787
TF3313_0790	PWY-6871	3-methylbutanol biosynthesis
TF3313_0794	PWY-6871	3-methylbutanol biosynthesis
TF3313_0795	PWY-7396	butanol and isobutanol biosynthesis (engineered)
TF3313_0801	PWY-6807	xyloglucan degradation II (exoglucanase)
TF3313_0805	PWY-2201	folate transformations I
TF3313_0805	PWY-3841	folate transformations II
TF3313_0805	PWY-7977	TF3313_0805
TF3313_0814	PWY-5686	UMP biosynthesis
TF3313_0814	PWY-7790	TF3313_0814
TF3313_0814	PWY-7791	TF3313_0814
TF3313_0841	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
TF3313_0841	PWY-6269	adenosylcobalamin salvage from cobinamide II
TF3313_0841	PWY-7961	TF3313_0841
TF3313_0841	PWY-7963	TF3313_0841
TF3313_0841	PWY-7964	TF3313_0841
TF3313_0841	PWY-7965	TF3313_0841
TF3313_0841	PWY-7966	TF3313_0841
TF3313_0841	PWY-7967	TF3313_0841
TF3313_0841	PWY-7968	TF3313_0841
TF3313_0841	PWY-7969	TF3313_0841
TF3313_0841	PWY-7970	TF3313_0841
TF3313_0841	PWY-7975	TF3313_0841
TF3313_0842	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
TF3313_0842	PWY-6269	adenosylcobalamin salvage from cobinamide II
TF3313_0842	PWY-7961	TF3313_0842
TF3313_0842	PWY-7963	TF3313_0842
TF3313_0842	PWY-7964	TF3313_0842
TF3313_0842	PWY-7965	TF3313_0842
TF3313_0842	PWY-7966	TF3313_0842
TF3313_0842	PWY-7967	TF3313_0842
TF3313_0842	PWY-7968	TF3313_0842
TF3313_0842	PWY-7969	TF3313_0842
TF3313_0842	PWY-7970	TF3313_0842
TF3313_0842	PWY-7975	TF3313_0842
TF3313_0843	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
TF3313_0843	PWY-6269	adenosylcobalamin salvage from cobinamide II
TF3313_0843	PWY-7964	TF3313_0843
TF3313_0843	PWY-7965	TF3313_0843
TF3313_0843	PWY-7966	TF3313_0843
TF3313_0843	PWY-7967	TF3313_0843
TF3313_0843	PWY-7968	TF3313_0843
TF3313_0843	PWY-7969	TF3313_0843
TF3313_0843	PWY-7970	TF3313_0843
TF3313_0873	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
TF3313_0875	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
TF3313_0875	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
TF3313_0889	PWY-7560	methylerythritol phosphate pathway II
TF3313_0890	PWY-7205	CMP phosphorylation
TF3313_0909	PWY-3861	mannitol degradation II
TF3313_0909	PWY-3881	mannitol biosynthesis
TF3313_0909	PWY-5659	GDP-mannose biosynthesis
TF3313_0909	PWY-6992	1,5-anhydrofructose degradation
TF3313_0909	PWY-7456	mannan degradation
TF3313_0909	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
TF3313_0909	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
TF3313_0910	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
TF3313_0910	PWY-622	starch biosynthesis
TF3313_0910	PWY-7900	TF3313_0910
TF3313_0920	PWY-6807	xyloglucan degradation II (exoglucanase)
TF3313_0925	PWY-5392	reductive TCA cycle II
TF3313_0925	PWY-5537	pyruvate fermentation to acetate V
TF3313_0925	PWY-5538	pyruvate fermentation to acetate VI
TF3313_0925	PWY-5690	TCA cycle II (plants and fungi)
TF3313_0925	PWY-5913	TCA cycle VI (obligate autotrophs)
TF3313_0925	PWY-6728	methylaspartate cycle
TF3313_0925	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
TF3313_0925	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
TF3313_0932	PWY-3841	folate transformations II
TF3313_0932	PWY-6614	tetrahydrofolate biosynthesis
TF3313_0933	PWY-3841	folate transformations II
TF3313_0933	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
TF3313_0933	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
TF3313_0933	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
TF3313_0933	PWY-7199	pyrimidine deoxyribonucleosides salvage
TF3313_0933	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
TF3313_0936	PWY-7183	pyrimidine nucleobases salvage I
TF3313_0962	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
TF3313_0962	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
TF3313_0962	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
TF3313_0993	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
TF3313_0998	PWY-6749	CMP-legionaminate biosynthesis I
TF3313_0998	PWY-7131	CMP-legionaminate biosynthesis II
TF3313_1009	PWY-7851	TF3313_1009
TF3313_1012	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
TF3313_1012	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
TF3313_1017	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
TF3313_1017	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
TF3313_1023	PWY-1042	glycolysis IV (plant cytosol)
TF3313_1023	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
TF3313_1023	PWY-5484	glycolysis II (from fructose 6-phosphate)
TF3313_1023	PWY-7385	1,3-propanediol biosynthesis (engineered)
TF3313_1042	PWY-6123	inosine-5'-phosphate biosynthesis I
TF3313_1042	PWY-7234	inosine-5'-phosphate biosynthesis III
TF3313_1057	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
TF3313_1073	PWY-6700	queuosine biosynthesis
TF3313_1079	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
TF3313_1082	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
TF3313_1082	PWY-7248	pectin degradation III
TF3313_1083	PWY-1042	glycolysis IV (plant cytosol)
TF3313_1083	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
TF3313_1083	PWY-5484	glycolysis II (from fructose 6-phosphate)
TF3313_1083	PWY-7385	1,3-propanediol biosynthesis (engineered)
TF3313_1104	PWY-6807	xyloglucan degradation II (exoglucanase)
TF3313_1107	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
TF3313_1107	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
TF3313_1107	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
TF3313_1143	PWY-6717	(1,4)-&beta;-xylan degradation
TF3313_1143	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
TF3313_1144	PWY-5392	reductive TCA cycle II
TF3313_1144	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
TF3313_1144	PWY-5690	TCA cycle II (plants and fungi)
TF3313_1144	PWY-5913	TCA cycle VI (obligate autotrophs)
TF3313_1144	PWY-6728	methylaspartate cycle
TF3313_1144	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
TF3313_1144	PWY-7254	TCA cycle VII (acetate-producers)
TF3313_1144	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
TF3313_1170	PWY-6700	queuosine biosynthesis
TF3313_1195	PWY-2941	L-lysine biosynthesis II
TF3313_1195	PWY-2942	L-lysine biosynthesis III
TF3313_1195	PWY-5097	L-lysine biosynthesis VI
TF3313_1209	PWY-5482	pyruvate fermentation to acetate II
TF3313_1209	PWY-5485	pyruvate fermentation to acetate IV
TF3313_1209	PWY-5497	purine nucleobases degradation II (anaerobic)
TF3313_1210	PWY-1281	sulfoacetaldehyde degradation I
TF3313_1210	PWY-5482	pyruvate fermentation to acetate II
TF3313_1210	PWY-5485	pyruvate fermentation to acetate IV
TF3313_1210	PWY-5497	purine nucleobases degradation II (anaerobic)
TF3313_1210	PWY-6637	sulfolactate degradation II
TF3313_1212	PWY-6614	tetrahydrofolate biosynthesis
TF3313_1213	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TF3313_1213	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TF3313_1213	PWY-7953	TF3313_1213
TF3313_1246	PWY-6853	ethylene biosynthesis II (microbes)
TF3313_1249	PWY-2781	<i>cis</i>-zeatin biosynthesis
TF3313_1252	PWY-5971	palmitate biosynthesis II (bacteria and plants)
TF3313_1252	PWY-5973	<i>cis</i>-vaccenate biosynthesis
TF3313_1252	PWY-5989	stearate biosynthesis II (bacteria and plants)
TF3313_1252	PWY-5994	palmitate biosynthesis I (animals and fungi)
TF3313_1252	PWY-6113	superpathway of mycolate biosynthesis
TF3313_1252	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
TF3313_1252	PWY-6519	8-amino-7-oxononanoate biosynthesis I
TF3313_1252	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
TF3313_1252	PWY-7663	gondoate biosynthesis (anaerobic)
TF3313_1252	PWY-7664	oleate biosynthesis IV (anaerobic)
TF3313_1252	PWY-7858	TF3313_1252
TF3313_1252	PWYG-321	mycolate biosynthesis
TF3313_1255	PWY-5686	UMP biosynthesis
TF3313_1255	PWY-7790	TF3313_1255
TF3313_1255	PWY-7791	TF3313_1255
TF3313_1263	PWY-6807	xyloglucan degradation II (exoglucanase)
TF3313_1269	PWY-6527	stachyose degradation
TF3313_1275	PWY-5194	siroheme biosynthesis
TF3313_1275	PWY-5196	factor 430 biosynthesis
TF3313_1275	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
TF3313_1285	PWY-6717	(1,4)-&beta;-xylan degradation
TF3313_1285	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
TF3313_1319	PWY-7991	TF3313_1319
TF3313_1326	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TF3313_1326	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TF3313_1327	PWY-6454	vancomycin resistance I
TF3313_1327	PWY-6455	vancomycin resistance II
TF3313_1338	PWY-1042	glycolysis IV (plant cytosol)
TF3313_1338	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
TF3313_1338	PWY-5484	glycolysis II (from fructose 6-phosphate)
TF3313_1338	PWY-5723	Rubisco shunt
TF3313_1338	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
TF3313_1338	PWY-6886	1-butanol autotrophic biosynthesis
TF3313_1338	PWY-6901	superpathway of glucose and xylose degradation
TF3313_1338	PWY-7003	glycerol degradation to butanol
TF3313_1338	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
TF3313_1338	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
TF3313_1339	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
TF3313_1339	PWY-6416	quinate degradation II
TF3313_1339	PWY-6707	gallate biosynthesis
TF3313_1395	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
TF3313_1404	PWY-6556	pyrimidine ribonucleosides salvage II
TF3313_1404	PWY-7181	pyrimidine deoxyribonucleosides degradation
TF3313_1404	PWY-7193	pyrimidine ribonucleosides salvage I
TF3313_1404	PWY-7199	pyrimidine deoxyribonucleosides salvage
TF3313_1406	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
TF3313_1406	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
TF3313_1433	PWY-7799	TF3313_1433
TF3313_1433	PWY-7800	TF3313_1433
TF3313_1457	PWY-7887	TF3313_1457
TF3313_1457	PWY-7892	TF3313_1457
TF3313_1470	PWY-6825	phosphatidylcholine biosynthesis V
TF3313_1490	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
TF3313_1490	PWY-6167	flavin biosynthesis II (archaea)
TF3313_1490	PWY-6168	flavin biosynthesis III (fungi)
TF3313_1490	PWY-7863	TF3313_1490
TF3313_1493	PWY-6898	thiamin salvage III
TF3313_1493	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
TF3313_1493	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
TF3313_1493	PWY-7356	thiamin salvage IV (yeast)
TF3313_1498	PWY-3781	aerobic respiration I (cytochrome c)
TF3313_1498	PWY-4302	aerobic respiration III (alternative oxidase pathway)
TF3313_1498	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
TF3313_1498	PWY-5690	TCA cycle II (plants and fungi)
TF3313_1498	PWY-6728	methylaspartate cycle
TF3313_1498	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
TF3313_1498	PWY-7254	TCA cycle VII (acetate-producers)
TF3313_1498	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
TF3313_1499	PWY-3781	aerobic respiration I (cytochrome c)
TF3313_1499	PWY-4302	aerobic respiration III (alternative oxidase pathway)
TF3313_1499	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
TF3313_1499	PWY-5690	TCA cycle II (plants and fungi)
TF3313_1499	PWY-6728	methylaspartate cycle
TF3313_1499	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
TF3313_1499	PWY-7254	TCA cycle VII (acetate-producers)
TF3313_1499	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
TF3313_1515	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
TF3313_1515	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
TF3313_1520	PWY-6167	flavin biosynthesis II (archaea)
TF3313_1520	PWY-6168	flavin biosynthesis III (fungi)
TF3313_1520	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
TF3313_1520	PWY-7991	TF3313_1520
TF3313_1533	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
TF3313_1534	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
TF3313_1534	PWY-3461	L-tyrosine biosynthesis II
TF3313_1534	PWY-3462	L-phenylalanine biosynthesis II
TF3313_1534	PWY-6120	L-tyrosine biosynthesis III
TF3313_1534	PWY-6627	salinosporamide A biosynthesis
TF3313_1534	PWY-7626	bacilysin biosynthesis
TF3313_1534	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
TF3313_1536	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
TF3313_1541	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
TF3313_1548	PWY-7533	gliotoxin biosynthesis
TF3313_1587	PWY-7805	TF3313_1587
TF3313_1587	PWY-7807	TF3313_1587
TF3313_1611	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
TF3313_1612	PWY-5392	reductive TCA cycle II
TF3313_1612	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
TF3313_1616	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
TF3313_1618	PWY-6700	queuosine biosynthesis
TF3313_1619	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
TF3313_1619	PWY-6148	tetrahydromethanopterin biosynthesis
TF3313_1619	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
TF3313_1619	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
TF3313_1619	PWY-7852	TF3313_1619
TF3313_1619	PWY-7853	TF3313_1619
TF3313_1632	PWY-5971	palmitate biosynthesis II (bacteria and plants)
TF3313_1632	PWY-5973	<i>cis</i>-vaccenate biosynthesis
TF3313_1632	PWY-5989	stearate biosynthesis II (bacteria and plants)
TF3313_1632	PWY-6113	superpathway of mycolate biosynthesis
TF3313_1632	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
TF3313_1632	PWY-6519	8-amino-7-oxononanoate biosynthesis I
TF3313_1632	PWY-7663	gondoate biosynthesis (anaerobic)
TF3313_1632	PWY-7664	oleate biosynthesis IV (anaerobic)
TF3313_1632	PWY-7858	TF3313_1632
TF3313_1632	PWYG-321	mycolate biosynthesis
TF3313_1653	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
TF3313_1653	PWY-6855	chitin degradation I (archaea)
TF3313_1653	PWY-6906	chitin derivatives degradation
TF3313_1657	PWY-2942	L-lysine biosynthesis III
TF3313_1660	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
TF3313_1660	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
TF3313_1661	PWY-4983	L-citrulline-nitric oxide cycle
TF3313_1661	PWY-4984	urea cycle
TF3313_1661	PWY-5	canavanine biosynthesis
TF3313_1661	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
TF3313_1661	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
TF3313_1671	PWY-7019	butirosin biosynthesis
TF3313_1676	PWY-5381	pyridine nucleotide cycling (plants)
TF3313_1676	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
TF3313_1676	PWY-6596	adenosine nucleotides degradation I
TF3313_1676	PWY-6606	guanosine nucleotides degradation II
TF3313_1676	PWY-6607	guanosine nucleotides degradation I
TF3313_1676	PWY-6608	guanosine nucleotides degradation III
TF3313_1676	PWY-7185	UTP and CTP dephosphorylation I
TF3313_1676	PWY-7821	TF3313_1676
TF3313_1694	PWY-7560	methylerythritol phosphate pathway II
TF3313_1716	PWY-6829	tRNA methylation (yeast)
TF3313_1716	PWY-7285	methylwyosine biosynthesis
TF3313_1716	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
TF3313_1725	PWY-6749	CMP-legionaminate biosynthesis I
TF3313_1729	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
TF3313_1745	PWY-5669	phosphatidylethanolamine biosynthesis I
TF3313_1762	PWY-6807	xyloglucan degradation II (exoglucanase)
TF3313_1766	PWY-6902	chitin degradation II
TF3313_1766	PWY-7822	TF3313_1766
TF3313_1766	PWY-7883	TF3313_1766
TF3313_1767	PWY-1622	formaldehyde assimilation I (serine pathway)
TF3313_1767	PWY-181	photorespiration
TF3313_1767	PWY-2161	folate polyglutamylation
TF3313_1767	PWY-2201	folate transformations I
TF3313_1767	PWY-3661	glycine betaine degradation I
TF3313_1767	PWY-3661-1	glycine betaine degradation II (mammalian)
TF3313_1767	PWY-3841	folate transformations II
TF3313_1767	PWY-5497	purine nucleobases degradation II (anaerobic)
TF3313_1769	PWY-6854	ethylene biosynthesis III (microbes)
TF3313_1773	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
TF3313_1774	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
TF3313_1794	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
TF3313_1794	PWY-5901	2,3-dihydroxybenzoate biosynthesis
TF3313_1794	PWY-6406	salicylate biosynthesis I
TF3313_1795	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
TF3313_1796	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
TF3313_1836	PWY-5316	nicotine biosynthesis
TF3313_1836	PWY-5381	pyridine nucleotide cycling (plants)
TF3313_1836	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
TF3313_1836	PWY-7342	superpathway of nicotine biosynthesis
TF3313_1862	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
TF3313_1868	PWY-7560	methylerythritol phosphate pathway II
TF3313_1873	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
TF3313_1881	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
TF3313_1881	PWY-6596	adenosine nucleotides degradation I
TF3313_1881	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
TF3313_1901	PWY-1042	glycolysis IV (plant cytosol)
TF3313_1901	PWY-1622	formaldehyde assimilation I (serine pathway)
TF3313_1901	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
TF3313_1901	PWY-5484	glycolysis II (from fructose 6-phosphate)
TF3313_1901	PWY-5723	Rubisco shunt
TF3313_1901	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
TF3313_1901	PWY-6886	1-butanol autotrophic biosynthesis
TF3313_1901	PWY-6901	superpathway of glucose and xylose degradation
TF3313_1901	PWY-7003	glycerol degradation to butanol
TF3313_1901	PWY-7124	ethylene biosynthesis V (engineered)
TF3313_1901	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
TF3313_1913	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
TF3313_1913	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
TF3313_1913	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
TF3313_1913	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
TF3313_1913	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
TF3313_1913	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
TF3313_1913	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
TF3313_1913	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
TF3313_1914	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
TF3313_1914	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
TF3313_1914	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
TF3313_1914	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
TF3313_1914	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
TF3313_1914	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
TF3313_1914	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
TF3313_1914	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
TF3313_1938	PWY-6938	NADH repair
TF3313_1944	PWY-5381	pyridine nucleotide cycling (plants)
TF3313_1948	PWY-3221	dTDP-L-rhamnose biosynthesis II
TF3313_1948	PWY-6808	dTDP-D-forosamine biosynthesis
TF3313_1948	PWY-6942	dTDP-D-desosamine biosynthesis
TF3313_1948	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
TF3313_1948	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
TF3313_1948	PWY-6974	dTDP-L-olivose biosynthesis
TF3313_1948	PWY-6976	dTDP-L-mycarose biosynthesis
TF3313_1948	PWY-7104	dTDP-L-megosamine biosynthesis
TF3313_1948	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
TF3313_1948	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
TF3313_1948	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
TF3313_1948	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
TF3313_1948	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
TF3313_1948	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
TF3313_1948	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
TF3313_1948	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
TF3313_1948	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
TF3313_1948	PWY-7688	TF3313_1948
TF3313_1948	PWY-7814	TF3313_1948
TF3313_1968	PWY-6749	CMP-legionaminate biosynthesis I
TF3313_1969	PWY-6700	queuosine biosynthesis
TF3313_1971	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
TF3313_1991	PWY-5367	petroselinate biosynthesis
TF3313_1991	PWY-5971	palmitate biosynthesis II (bacteria and plants)
TF3313_1991	PWY-5973	<i>cis</i>-vaccenate biosynthesis
TF3313_1991	PWY-5989	stearate biosynthesis II (bacteria and plants)
TF3313_1991	PWY-5994	palmitate biosynthesis I (animals and fungi)
TF3313_1991	PWY-6113	superpathway of mycolate biosynthesis
TF3313_1991	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
TF3313_1991	PWY-6519	8-amino-7-oxononanoate biosynthesis I
TF3313_1991	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
TF3313_1991	PWY-7663	gondoate biosynthesis (anaerobic)
TF3313_1991	PWY-7664	oleate biosynthesis IV (anaerobic)
TF3313_1991	PWY-7858	TF3313_1991
TF3313_1991	PWYG-321	mycolate biosynthesis
TF3313_1992	PWY-4381	fatty acid biosynthesis initiation I
TF3313_2001	PWY-6803	phosphatidylcholine acyl editing
TF3313_2001	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
TF3313_2001	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
TF3313_2001	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
TF3313_2001	PWY-7783	TF3313_2001
TF3313_2022	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
TF3313_2051	PWY-6823	molybdenum cofactor biosynthesis
TF3313_2064	PWY-3961	phosphopantothenate biosynthesis II
TF3313_2077	PWY-6700	queuosine biosynthesis
TF3313_2087	PWY-7039	phosphatidate metabolism, as a signaling molecule
TF3313_2087	PWY-7817	TF3313_2087
TF3313_2091	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
TF3313_2097	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
TF3313_2097	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
TF3313_2097	PWY-7242	D-fructuronate degradation
TF3313_2097	PWY-7310	D-glucosaminate degradation
TF3313_2097	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
TF3313_2113	PWY-7560	methylerythritol phosphate pathway II
TF3313_2119	PWY-381	nitrate reduction II (assimilatory)
TF3313_2119	PWY-5675	nitrate reduction V (assimilatory)
TF3313_2119	PWY-6549	L-glutamine biosynthesis III
TF3313_2119	PWY-6963	ammonia assimilation cycle I
TF3313_2119	PWY-6964	ammonia assimilation cycle II
TF3313_2120	PWY-5381	pyridine nucleotide cycling (plants)
TF3313_2120	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
TF3313_2120	PWY-7761	TF3313_2120
TF3313_2123	PWY-6700	queuosine biosynthesis
TF3313_2124	PWY-43	putrescine biosynthesis II
TF3313_2173	PWY-7805	TF3313_2173
TF3313_2173	PWY-7807	TF3313_2173
TF3313_2175	PWY-6562	norspermidine biosynthesis
TF3313_2178	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
TF3313_2178	PWY-6148	tetrahydromethanopterin biosynthesis
TF3313_2178	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
TF3313_2178	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
TF3313_2180	PWY-5941	glycogen degradation II (eukaryotic)
TF3313_2180	PWY-6724	starch degradation II
TF3313_2180	PWY-6737	starch degradation V
TF3313_2180	PWY-7238	sucrose biosynthesis II
TF3313_2181	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
TF3313_2181	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
TF3313_2181	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
TF3313_2181	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
TF3313_2181	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
TF3313_2181	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
TF3313_2181	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
TF3313_2181	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
TF3313_2184	PWY-5667	CDP-diacylglycerol biosynthesis I
TF3313_2184	PWY-5981	CDP-diacylglycerol biosynthesis III
TF3313_2184	PWY-7817	TF3313_2184
TF3313_2194	PWY-723	alkylnitronates degradation
TF3313_2196	PWY-2161	folate polyglutamylation
TF3313_2199	PWY-6703	preQ<sub>0</sub> biosynthesis
TF3313_2207	PWY-7851	TF3313_2207
TF3313_2219	PWY-6906	chitin derivatives degradation
TF3313_2219	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
TF3313_2219	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
TF3313_2225	PWY-6807	xyloglucan degradation II (exoglucanase)
TF3313_2230	PWY-2201	folate transformations I
TF3313_2230	PWY-3841	folate transformations II
TF3313_2240	PWY-6519	8-amino-7-oxononanoate biosynthesis I
TF3313_2240	PWY-6578	8-amino-7-oxononanoate biosynthesis III
TF3313_2240	PWY-7147	8-amino-7-oxononanoate biosynthesis II
TF3313_2246	PWY-5971	palmitate biosynthesis II (bacteria and plants)
TF3313_2246	PWY-5973	<i>cis</i>-vaccenate biosynthesis
TF3313_2246	PWY-5989	stearate biosynthesis II (bacteria and plants)
TF3313_2246	PWY-5994	palmitate biosynthesis I (animals and fungi)
TF3313_2246	PWY-6113	superpathway of mycolate biosynthesis
TF3313_2246	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
TF3313_2246	PWY-6519	8-amino-7-oxononanoate biosynthesis I
TF3313_2246	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
TF3313_2246	PWY-7663	gondoate biosynthesis (anaerobic)
TF3313_2246	PWY-7664	oleate biosynthesis IV (anaerobic)
TF3313_2246	PWY-7858	TF3313_2246
TF3313_2246	PWYG-321	mycolate biosynthesis
TF3313_2277	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
TF3313_2283	PWY-1042	glycolysis IV (plant cytosol)
TF3313_2283	PWY-5484	glycolysis II (from fructose 6-phosphate)
TF3313_2283	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
TF3313_2283	PWY-7003	glycerol degradation to butanol
TF3313_2285	PWY-5663	tetrahydrobiopterin biosynthesis I
TF3313_2285	PWY-5664	tetrahydrobiopterin biosynthesis II
TF3313_2285	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
TF3313_2285	PWY-6703	preQ<sub>0</sub> biosynthesis
TF3313_2285	PWY-6983	tetrahydrobiopterin biosynthesis III
TF3313_2285	PWY-7442	drosopterin and aurodrosopterin biosynthesis
TF3313_2285	PWY-7852	TF3313_2285
TF3313_2311	PWY-5686	UMP biosynthesis
TF3313_2311	PWY-7790	TF3313_2311
TF3313_2311	PWY-7791	TF3313_2311
TF3313_2326	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
TF3313_2326	PWY-5491	diethylphosphate degradation
TF3313_2342	PWY-6807	xyloglucan degradation II (exoglucanase)
TF3313_2353	PWY-7980	TF3313_2353
TF3313_2376	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
TF3313_2376	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
TF3313_2376	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
TF3313_2376	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
TF3313_2377	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
TF3313_2377	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
TF3313_2389	PWY-6807	xyloglucan degradation II (exoglucanase)
TF3313_2390	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
TF3313_2390	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
TF3313_2398	PWY-5743	3-hydroxypropanoate cycle
TF3313_2398	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
TF3313_2398	PWY-6728	methylaspartate cycle
TF3313_2398	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
TF3313_2398	PWY-7854	TF3313_2398
TF3313_2403	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
TF3313_2405	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
TF3313_2405	PWY-7177	UTP and CTP dephosphorylation II
TF3313_2405	PWY-7185	UTP and CTP dephosphorylation I
TF3313_2430	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
TF3313_2431	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
TF3313_2432	PWY-5194	siroheme biosynthesis
TF3313_2432	PWY-5196	factor 430 biosynthesis
TF3313_2432	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
TF3313_2433	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
TF3313_2445	PWY-5686	UMP biosynthesis
TF3313_2445	PWY-7790	TF3313_2445
TF3313_2445	PWY-7791	TF3313_2445
TF3313_2453	PWY-4261	glycerol degradation I
TF3313_2472	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
TF3313_2472	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
TF3313_2474	PWY-7560	methylerythritol phosphate pathway II
TF3313_2489	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
TF3313_2489	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
TF3313_2489	PWY-6896	thiamin salvage I
TF3313_2489	PWY-6897	thiamin salvage II
TF3313_2505	PWY-6807	xyloglucan degradation II (exoglucanase)
TF3313_2555	PWY-6012	acyl carrier protein metabolism I
TF3313_2555	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
TF3313_2555	PWY-6289	petrobactin biosynthesis
TF3313_2568	PWY-40	putrescine biosynthesis I
TF3313_2568	PWY-43	putrescine biosynthesis II
TF3313_2568	PWY-6305	putrescine biosynthesis IV
TF3313_2568	PWY-6834	spermidine biosynthesis III
TF3313_2578	PWY-7884	TF3313_2578
TF3313_2591	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
TF3313_2592	PWY-5839	menaquinol-7 biosynthesis
TF3313_2592	PWY-5844	menaquinol-9 biosynthesis
TF3313_2592	PWY-5849	menaquinol-6 biosynthesis
TF3313_2592	PWY-5890	menaquinol-10 biosynthesis
TF3313_2592	PWY-5891	menaquinol-11 biosynthesis
TF3313_2592	PWY-5892	menaquinol-12 biosynthesis
TF3313_2592	PWY-5895	menaquinol-13 biosynthesis
TF3313_2593	PWY-6123	inosine-5'-phosphate biosynthesis I
TF3313_2593	PWY-6124	inosine-5'-phosphate biosynthesis II
TF3313_2593	PWY-7234	inosine-5'-phosphate biosynthesis III
TF3313_2608	PWY-6807	xyloglucan degradation II (exoglucanase)
TF3313_2615	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
TF3313_2615	PWY-6549	L-glutamine biosynthesis III
TF3313_2615	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
TF3313_2615	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
TF3313_2639	PWY-7805	TF3313_2639
TF3313_2639	PWY-7807	TF3313_2639
TF3313_2675	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
TF3313_2675	PWY-5491	diethylphosphate degradation
TF3313_2681	PWY-6655	xanthan biosynthesis
TF3313_2681	PWY-6658	acetan biosynthesis
TF3313_2685	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
TF3313_2685	PWY-2201	folate transformations I
TF3313_2685	PWY-3841	folate transformations II
TF3313_2685	PWY-5030	L-histidine degradation III
TF3313_2685	PWY-5497	purine nucleobases degradation II (anaerobic)
TF3313_2685	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
TF3313_2685	PWY-7909	TF3313_2685
TF3313_2689	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
TF3313_2689	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
TF3313_2712	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
TF3313_2714	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
TF3313_2714	PWY-5739	GDP-D-perosamine biosynthesis
TF3313_2714	PWY-5740	GDP-L-colitose biosynthesis
TF3313_2714	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
TF3313_2714	PWY-7573	GDP-mycosamine biosynthesis
TF3313_2718	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
TF3313_2723	PWY-7805	TF3313_2723
TF3313_2723	PWY-7807	TF3313_2723
TF3313_2731	PWY-6807	xyloglucan degradation II (exoglucanase)
TF3313_2743	PWY-5057	L-valine degradation II
TF3313_2743	PWY-5076	L-leucine degradation III
TF3313_2743	PWY-5078	L-isoleucine degradation II
TF3313_2743	PWY-5101	L-isoleucine biosynthesis II
TF3313_2743	PWY-5103	L-isoleucine biosynthesis III
TF3313_2743	PWY-5104	L-isoleucine biosynthesis IV
TF3313_2743	PWY-5108	L-isoleucine biosynthesis V
TF3313_2743	PWY-7767	TF3313_2743
TF3313_2767	PWY-2941	L-lysine biosynthesis II
TF3313_2767	PWY-2942	L-lysine biosynthesis III
TF3313_2767	PWY-5097	L-lysine biosynthesis VI
TF3313_2767	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
TF3313_2767	PWY-6559	spermidine biosynthesis II
TF3313_2767	PWY-6562	norspermidine biosynthesis
TF3313_2767	PWY-7153	grixazone biosynthesis
TF3313_2767	PWY-7977	TF3313_2767
TF3313_2768	PWY-1042	glycolysis IV (plant cytosol)
TF3313_2768	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
TF3313_2768	PWY-5484	glycolysis II (from fructose 6-phosphate)
TF3313_2768	PWY-5723	Rubisco shunt
TF3313_2768	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
TF3313_2768	PWY-6886	1-butanol autotrophic biosynthesis
TF3313_2768	PWY-6901	superpathway of glucose and xylose degradation
TF3313_2768	PWY-7003	glycerol degradation to butanol
TF3313_2768	PWY-7124	ethylene biosynthesis V (engineered)
TF3313_2768	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
TF3313_2772	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
TF3313_2772	PWY-6855	chitin degradation I (archaea)
TF3313_2772	PWY-6906	chitin derivatives degradation
TF3313_2795	PWY-4381	fatty acid biosynthesis initiation I
TF3313_2890	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
TF3313_2890	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
TF3313_2890	PWY-7953	TF3313_2890
TF3313_2898	PWY-6807	xyloglucan degradation II (exoglucanase)
TF3313_2903	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
TF3313_2905	PWY-5941	glycogen degradation II (eukaryotic)
TF3313_2905	PWY-6731	starch degradation III
TF3313_2905	PWY-6737	starch degradation V
TF3313_2905	PWY-7238	sucrose biosynthesis II
TF3313_2919	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
TF3313_2919	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
TF3313_2923	PWY-1042	glycolysis IV (plant cytosol)
TF3313_2923	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
TF3313_2923	PWY-5484	glycolysis II (from fructose 6-phosphate)
TF3313_2923	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
TF3313_2923	PWY-7385	1,3-propanediol biosynthesis (engineered)
TF3313_2936	PWY-4381	fatty acid biosynthesis initiation I
TF3313_2936	PWY-6799	fatty acid biosynthesis (plant mitochondria)
TF3313_2936	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
TF3313_2939	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
TF3313_2939	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
TF3313_2939	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
TF3313_2939	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
TF3313_2944	PWY-6123	inosine-5'-phosphate biosynthesis I
TF3313_2944	PWY-6124	inosine-5'-phosphate biosynthesis II
TF3313_2944	PWY-7234	inosine-5'-phosphate biosynthesis III
TF3313_2949	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
TF3313_2949	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
TF3313_2949	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
TF3313_2949	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
TF3313_2951	PWY-5667	CDP-diacylglycerol biosynthesis I
TF3313_2951	PWY-5981	CDP-diacylglycerol biosynthesis III
TF3313_2951	PWY-7902	TF3313_2951
TF3313_2952	PWY-3801	sucrose degradation II (sucrose synthase)
TF3313_2952	PWY-5054	sorbitol biosynthesis I
TF3313_2952	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
TF3313_2952	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
TF3313_2952	PWY-5659	GDP-mannose biosynthesis
TF3313_2952	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
TF3313_2952	PWY-621	sucrose degradation III (sucrose invertase)
TF3313_2952	PWY-622	starch biosynthesis
TF3313_2952	PWY-6981	chitin biosynthesis
TF3313_2952	PWY-6992	1,5-anhydrofructose degradation
TF3313_2952	PWY-7238	sucrose biosynthesis II
TF3313_2952	PWY-7347	sucrose biosynthesis III
TF3313_2952	PWY-7385	1,3-propanediol biosynthesis (engineered)
