TF3313_0829 635c942a265e293c6cf046c26368ba24 192 SUPERFAMILY SSF88659 118 178 2.62E-12 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TF3313_0829 635c942a265e293c6cf046c26368ba24 192 Gene3D G3DSA:1.10.1740.10 4 87 4.4E-15 T 11-10-2018 TF3313_0829 635c942a265e293c6cf046c26368ba24 192 SUPERFAMILY SSF88946 6 101 3.4E-17 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_0829 635c942a265e293c6cf046c26368ba24 192 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 17 175 6.7E-44 T 11-10-2018 IPR014327 RNA polymerase sigma-70, Bacteroidetes type TF3313_0829 635c942a265e293c6cf046c26368ba24 192 Pfam PF04542 Sigma-70 region 2 22 88 3.0E-7 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_0829 635c942a265e293c6cf046c26368ba24 192 Pfam PF08281 Sigma-70, region 4 122 170 3.5E-11 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TF3313_0829 635c942a265e293c6cf046c26368ba24 192 Gene3D G3DSA:1.10.10.10 93 180 1.1E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_0829 635c942a265e293c6cf046c26368ba24 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 175 1.0E-25 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TF3313_1446 96f4e802bc5bf63a95384316ac19cf62 718 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 177 9.7E-16 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TF3313_1446 96f4e802bc5bf63a95384316ac19cf62 718 SMART SM00889 471 618 1.0E-46 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 TF3313_1446 96f4e802bc5bf63a95384316ac19cf62 718 SUPERFAMILY SSF54211 470 619 8.85E-35 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TF3313_1446 96f4e802bc5bf63a95384316ac19cf62 718 SUPERFAMILY SSF54980 393 470 3.96E-15 T 11-10-2018 IPR035647 EF-G domain III/V-like TF3313_1446 96f4e802bc5bf63a95384316ac19cf62 718 Gene3D G3DSA:3.30.230.10 475 622 3.4E-40 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TF3313_1446 96f4e802bc5bf63a95384316ac19cf62 718 Gene3D G3DSA:3.30.70.240 623 711 6.0E-28 T 11-10-2018 TF3313_1446 96f4e802bc5bf63a95384316ac19cf62 718 SUPERFAMILY SSF54980 621 712 1.73E-25 T 11-10-2018 IPR035647 EF-G domain III/V-like TF3313_1446 96f4e802bc5bf63a95384316ac19cf62 718 Gene3D G3DSA:3.30.70.870 395 471 5.2E-16 T 11-10-2018 TF3313_1446 96f4e802bc5bf63a95384316ac19cf62 718 Gene3D G3DSA:3.40.50.300 10 380 6.5E-90 T 11-10-2018 TF3313_1446 96f4e802bc5bf63a95384316ac19cf62 718 Gene3D G3DSA:3.40.50.300 17 275 6.5E-90 T 11-10-2018 TF3313_1446 96f4e802bc5bf63a95384316ac19cf62 718 PRINTS PR00315 GTP-binding elongation factor signature 93 104 8.2E-5 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TF3313_1446 96f4e802bc5bf63a95384316ac19cf62 718 PRINTS PR00315 GTP-binding elongation factor signature 129 138 8.2E-5 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TF3313_1446 96f4e802bc5bf63a95384316ac19cf62 718 PRINTS PR00315 GTP-binding elongation factor signature 77 87 8.2E-5 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TF3313_1446 96f4e802bc5bf63a95384316ac19cf62 718 PRINTS PR00315 GTP-binding elongation factor signature 11 24 8.2E-5 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TF3313_1446 96f4e802bc5bf63a95384316ac19cf62 718 Pfam PF03144 Elongation factor Tu domain 2 315 381 8.6E-10 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 TF3313_1446 96f4e802bc5bf63a95384316ac19cf62 718 Pfam PF00679 Elongation factor G C-terminus 621 706 7.2E-27 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like TF3313_1446 96f4e802bc5bf63a95384316ac19cf62 718 Pfam PF00009 Elongation factor Tu GTP binding domain 8 272 2.2E-31 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TF3313_1446 96f4e802bc5bf63a95384316ac19cf62 718 SUPERFAMILY SSF52540 5 277 2.22E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1446 96f4e802bc5bf63a95384316ac19cf62 718 Pfam PF03764 Elongation factor G, domain IV 470 617 1.7E-25 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 TF3313_1446 96f4e802bc5bf63a95384316ac19cf62 718 SUPERFAMILY SSF50447 294 394 3.3E-17 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TF3313_1446 96f4e802bc5bf63a95384316ac19cf62 718 Pfam PF14492 Elongation Factor G, domain II 396 466 8.1E-18 T 11-10-2018 TF3313_1446 96f4e802bc5bf63a95384316ac19cf62 718 SMART SM00838 620 707 2.2E-35 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like TF3313_1789 3d3f2f03294b31fc22b06f597db63eb6 1270 Pfam PF10385 RNA polymerase beta subunit external 1 domain 552 620 1.2E-21 T 11-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1789 3d3f2f03294b31fc22b06f597db63eb6 1270 Pfam PF04560 RNA polymerase Rpb2, domain 7 1196 1269 5.2E-24 T 11-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1789 3d3f2f03294b31fc22b06f597db63eb6 1270 Gene3D G3DSA:2.40.270.10 760 800 4.3E-6 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1789 3d3f2f03294b31fc22b06f597db63eb6 1270 Pfam PF04565 RNA polymerase Rpb2, domain 3 474 542 2.0E-30 T 11-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1789 3d3f2f03294b31fc22b06f597db63eb6 1270 Pfam PF00562 RNA polymerase Rpb2, domain 6 685 1194 6.7E-148 T 11-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1789 3d3f2f03294b31fc22b06f597db63eb6 1270 Gene3D G3DSA:2.40.50.150 801 918 3.3E-40 T 11-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1789 3d3f2f03294b31fc22b06f597db63eb6 1270 SUPERFAMILY SSF64484 9 1269 0.0 T 11-10-2018 TF3313_1789 3d3f2f03294b31fc22b06f597db63eb6 1270 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 10 1270 11.77 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1789 3d3f2f03294b31fc22b06f597db63eb6 1270 Gene3D G3DSA:3.90.1800.10 1182 1239 1.7E-9 T 11-10-2018 TF3313_1789 3d3f2f03294b31fc22b06f597db63eb6 1270 Gene3D G3DSA:3.90.1100.10 613 677 1.0E-19 T 11-10-2018 TF3313_1789 3d3f2f03294b31fc22b06f597db63eb6 1270 Gene3D G3DSA:3.90.1100.10 15 207 4.1E-47 T 11-10-2018 TF3313_1789 3d3f2f03294b31fc22b06f597db63eb6 1270 Pfam PF04561 RNA polymerase Rpb2, domain 2 297 415 2.1E-21 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1789 3d3f2f03294b31fc22b06f597db63eb6 1270 Pfam PF04561 RNA polymerase Rpb2, domain 2 149 218 4.6E-8 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1789 3d3f2f03294b31fc22b06f597db63eb6 1270 Gene3D G3DSA:2.40.50.100 678 759 4.6E-21 T 11-10-2018 TF3313_1789 3d3f2f03294b31fc22b06f597db63eb6 1270 Gene3D G3DSA:3.90.1100.10 374 591 8.5E-70 T 11-10-2018 TF3313_1789 3d3f2f03294b31fc22b06f597db63eb6 1270 Gene3D G3DSA:2.40.270.10 1018 1109 3.4E-39 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1789 3d3f2f03294b31fc22b06f597db63eb6 1270 Gene3D G3DSA:2.40.270.10 1110 1172 6.0E-21 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1789 3d3f2f03294b31fc22b06f597db63eb6 1270 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 7 1268 0.0 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1789 3d3f2f03294b31fc22b06f597db63eb6 1270 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1047 1059 - T 11-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1789 3d3f2f03294b31fc22b06f597db63eb6 1270 Pfam PF04563 RNA polymerase beta subunit 25 461 3.3E-24 T 11-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_0185 3e8303e12fb59a05ab41413226d63448 418 ProDom PD042532 ISOMERASE L-RHAMNOSE METAL-BINDING METABOLISM RHAMNOSE MANGANESE ENZYME KINASE 3D-STRUCTURE RHAA/RHAB 10 417 0.0 T 11-10-2018 TF3313_0185 3e8303e12fb59a05ab41413226d63448 418 SUPERFAMILY SSF51658 7 417 1.63E-71 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily TF3313_0185 3e8303e12fb59a05ab41413226d63448 418 Pfam PF06134 L-rhamnose isomerase (RhaA) 6 417 5.0E-184 T 11-10-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 TF3313_0185 3e8303e12fb59a05ab41413226d63448 418 Hamap MF_00541 L-rhamnose isomerase [rhaA]. 1 418 229.419 T 11-10-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 TF3313_0185 3e8303e12fb59a05ab41413226d63448 418 TIGRFAM TIGR01748 rhaA: L-rhamnose isomerase 6 417 4.6E-182 T 11-10-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 TF3313_0185 3e8303e12fb59a05ab41413226d63448 418 Gene3D G3DSA:3.20.20.150 1 418 4.1E-168 T 11-10-2018 TF3313_0659 06a3e47944ea23c51a952e4fc54ce000 42 Pfam PF05713 Bacterial mobilisation protein (MobC) 1 38 5.2E-6 T 11-10-2018 IPR008687 Bacterial mobilisation TF3313_2612 3641fd6dd21cce453694b45221ab30f6 434 SUPERFAMILY SSF48452 7 434 3.8E-73 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2612 3641fd6dd21cce453694b45221ab30f6 434 Pfam PF07980 SusD family 296 434 2.6E-22 T 11-10-2018 IPR012944 RagB/SusD domain TF3313_2612 3641fd6dd21cce453694b45221ab30f6 434 Gene3D G3DSA:1.25.40.900 238 384 3.9E-84 T 11-10-2018 TF3313_2612 3641fd6dd21cce453694b45221ab30f6 434 Pfam PF14322 Starch-binding associating with outer membrane 16 178 1.8E-19 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_2612 3641fd6dd21cce453694b45221ab30f6 434 Gene3D G3DSA:2.20.20.130 205 305 3.9E-84 T 11-10-2018 TF3313_2612 3641fd6dd21cce453694b45221ab30f6 434 Gene3D G3DSA:1.25.40.390 3 415 3.9E-84 T 11-10-2018 TF3313_0516 6f9ba1d8befe4d70a58c34623fdf382c 623 Pfam PF01496 V-type ATPase 116kDa subunit family 535 622 1.2E-9 T 11-10-2018 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TF3313_0516 6f9ba1d8befe4d70a58c34623fdf382c 623 Pfam PF01496 V-type ATPase 116kDa subunit family 227 382 1.4E-9 T 11-10-2018 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TF3313_0353 d70f142c351e81c24fd0e7c980d119a9 220 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 182 1.8E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TF3313_0353 d70f142c351e81c24fd0e7c980d119a9 220 SUPERFAMILY SSF56784 1 217 2.46E-54 T 11-10-2018 IPR036412 HAD-like superfamily TF3313_0353 d70f142c351e81c24fd0e7c980d119a9 220 Gene3D G3DSA:3.40.50.1000 7 209 3.6E-56 T 11-10-2018 IPR023214 HAD superfamily TF3313_0353 d70f142c351e81c24fd0e7c980d119a9 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 101 114 3.2E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TF3313_0353 d70f142c351e81c24fd0e7c980d119a9 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 3.2E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TF3313_0353 d70f142c351e81c24fd0e7c980d119a9 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 132 148 3.2E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TF3313_0353 d70f142c351e81c24fd0e7c980d119a9 220 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 188 4.0E-36 T 11-10-2018 TF3313_0353 d70f142c351e81c24fd0e7c980d119a9 220 Gene3D G3DSA:1.10.150.240 19 87 3.6E-56 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 TF3313_2080 be8dc45feed625602492740ed3cfdfa2 586 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 69 229 2.1E-9 T 11-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like TF3313_1027 ee882b20ef52f0776218741f6a5a1f8d 625 Gene3D G3DSA:1.10.10.1800 457 564 7.2E-26 T 11-10-2018 TF3313_1027 ee882b20ef52f0776218741f6a5a1f8d 625 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 3 625 39.109 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 TF3313_1027 ee882b20ef52f0776218741f6a5a1f8d 625 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 271 285 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 TF3313_1027 ee882b20ef52f0776218741f6a5a1f8d 625 SMART SM01228 550 621 1.9E-34 T 11-10-2018 TF3313_1027 ee882b20ef52f0776218741f6a5a1f8d 625 Gene3D G3DSA:3.50.50.60 1 227 2.2E-83 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TF3313_1027 ee882b20ef52f0776218741f6a5a1f8d 625 Gene3D G3DSA:3.50.50.60 294 456 6.0E-58 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TF3313_1027 ee882b20ef52f0776218741f6a5a1f8d 625 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 366 389 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 TF3313_1027 ee882b20ef52f0776218741f6a5a1f8d 625 SUPERFAMILY SSF51905 4 257 4.72E-42 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TF3313_1027 ee882b20ef52f0776218741f6a5a1f8d 625 Pfam PF13932 GidA associated domain 399 620 1.4E-73 T 11-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 TF3313_1027 ee882b20ef52f0776218741f6a5a1f8d 625 Pfam PF01134 Glucose inhibited division protein A 6 397 1.4E-150 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 TF3313_1027 ee882b20ef52f0776218741f6a5a1f8d 625 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 5 623 9.8E-243 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 TF3313_1027 ee882b20ef52f0776218741f6a5a1f8d 625 Gene3D G3DSA:1.10.150.570 573 625 2.5E-22 T 11-10-2018 TF3313_2277 e8877158a6a348a91d3068645d6540f6 824 Pfam PF00842 Alanine racemase, C-terminal domain 698 821 2.5E-44 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TF3313_2277 e8877158a6a348a91d3068645d6540f6 824 Pfam PF08245 Mur ligase middle domain 112 295 5.0E-27 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TF3313_2277 e8877158a6a348a91d3068645d6540f6 824 PRINTS PR00992 Alanine racemase signature 485 501 1.3E-39 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TF3313_2277 e8877158a6a348a91d3068645d6540f6 824 PRINTS PR00992 Alanine racemase signature 582 594 1.3E-39 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TF3313_2277 e8877158a6a348a91d3068645d6540f6 824 PRINTS PR00992 Alanine racemase signature 753 770 1.3E-39 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TF3313_2277 e8877158a6a348a91d3068645d6540f6 824 PRINTS PR00992 Alanine racemase signature 660 687 1.3E-39 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TF3313_2277 e8877158a6a348a91d3068645d6540f6 824 PRINTS PR00992 Alanine racemase signature 714 729 1.3E-39 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TF3313_2277 e8877158a6a348a91d3068645d6540f6 824 PRINTS PR00992 Alanine racemase signature 521 539 1.3E-39 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TF3313_2277 e8877158a6a348a91d3068645d6540f6 824 PRINTS PR00992 Alanine racemase signature 804 817 1.3E-39 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TF3313_2277 e8877158a6a348a91d3068645d6540f6 824 PRINTS PR00992 Alanine racemase signature 616 627 1.3E-39 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TF3313_2277 e8877158a6a348a91d3068645d6540f6 824 SUPERFAMILY SSF50621 693 823 8.02E-48 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TF3313_2277 e8877158a6a348a91d3068645d6540f6 824 Gene3D G3DSA:3.20.20.10 468 682 4.9E-117 T 11-10-2018 IPR029066 PLP-binding barrel TF3313_2277 e8877158a6a348a91d3068645d6540f6 824 SUPERFAMILY SSF53244 318 455 6.41E-19 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TF3313_2277 e8877158a6a348a91d3068645d6540f6 824 SUPERFAMILY SSF53623 107 303 1.31E-33 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TF3313_2277 e8877158a6a348a91d3068645d6540f6 824 Gene3D G3DSA:2.40.37.10 465 821 4.9E-117 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TF3313_2277 e8877158a6a348a91d3068645d6540f6 824 SMART SM01005 698 822 1.0E-66 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TF3313_2277 e8877158a6a348a91d3068645d6540f6 824 Hamap MF_01201 Alanine racemase. 459 822 29.892 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TF3313_2277 e8877158a6a348a91d3068645d6540f6 824 SUPERFAMILY SSF63418 9 103 4.97E-13 T 11-10-2018 IPR035911 MurE/MurF, N-terminal TF3313_2277 e8877158a6a348a91d3068645d6540f6 824 TIGRFAM TIGR00492 alr: alanine racemase 462 821 1.1E-92 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TF3313_2277 e8877158a6a348a91d3068645d6540f6 824 Gene3D G3DSA:3.90.190.20 318 464 9.2E-19 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TF3313_2277 e8877158a6a348a91d3068645d6540f6 824 Pfam PF01225 Mur ligase family, catalytic domain 27 102 4.9E-5 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 TF3313_2277 e8877158a6a348a91d3068645d6540f6 824 Gene3D G3DSA:3.40.1190.10 89 310 7.4E-41 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TF3313_2277 e8877158a6a348a91d3068645d6540f6 824 Pfam PF01168 Alanine racemase, N-terminal domain 466 686 6.8E-53 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TF3313_2277 e8877158a6a348a91d3068645d6540f6 824 SUPERFAMILY SSF51419 466 697 2.4E-51 T 11-10-2018 IPR029066 PLP-binding barrel TF3313_2277 e8877158a6a348a91d3068645d6540f6 824 Gene3D G3DSA:3.40.1390.10 1 79 2.7E-8 T 11-10-2018 TF3313_0495 c6160bd17782248ff1ed66c394c2a7b8 111 Pfam PF13657 HipA N-terminal domain 6 101 2.0E-26 T 11-10-2018 IPR017508 HipA, N-terminal subdomain 1 TF3313_0495 c6160bd17782248ff1ed66c394c2a7b8 111 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 3 101 4.1E-38 T 11-10-2018 IPR017508 HipA, N-terminal subdomain 1 TF3313_2286 e65b39c0bb5a6019e540770fd1552bb9 204 SUPERFAMILY SSF55821 3 202 6.71E-49 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily TF3313_2286 e65b39c0bb5a6019e540770fd1552bb9 204 Pfam PF01300 Telomere recombination 21 198 1.2E-43 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 TF3313_2286 e65b39c0bb5a6019e540770fd1552bb9 204 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 5 200 8.4E-56 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 TF3313_2286 e65b39c0bb5a6019e540770fd1552bb9 204 Gene3D G3DSA:3.90.870.10 1 202 4.1E-61 T 11-10-2018 TF3313_1809 27fb9f3db898c67c4005c70938fede8c 389 Pfam PF13384 Homeodomain-like domain 7 44 1.2E-9 T 11-10-2018 TF3313_1809 27fb9f3db898c67c4005c70938fede8c 389 SUPERFAMILY SSF53098 143 304 4.93E-19 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TF3313_1809 27fb9f3db898c67c4005c70938fede8c 389 Pfam PF00665 Integrase core domain 146 260 7.6E-12 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 TF3313_1809 27fb9f3db898c67c4005c70938fede8c 389 SUPERFAMILY SSF46689 2 122 4.06E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TF3313_1809 27fb9f3db898c67c4005c70938fede8c 389 Gene3D G3DSA:1.10.10.60 4 46 5.3E-6 T 11-10-2018 TF3313_1809 27fb9f3db898c67c4005c70938fede8c 389 Gene3D G3DSA:3.30.420.10 145 271 3.2E-11 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TF3313_1841 27fb9f3db898c67c4005c70938fede8c 389 Pfam PF13384 Homeodomain-like domain 7 44 1.2E-9 T 11-10-2018 TF3313_1841 27fb9f3db898c67c4005c70938fede8c 389 SUPERFAMILY SSF53098 143 304 4.93E-19 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TF3313_1841 27fb9f3db898c67c4005c70938fede8c 389 Pfam PF00665 Integrase core domain 146 260 7.6E-12 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 TF3313_1841 27fb9f3db898c67c4005c70938fede8c 389 SUPERFAMILY SSF46689 2 122 4.06E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TF3313_1841 27fb9f3db898c67c4005c70938fede8c 389 Gene3D G3DSA:1.10.10.60 4 46 5.3E-6 T 11-10-2018 TF3313_1841 27fb9f3db898c67c4005c70938fede8c 389 Gene3D G3DSA:3.30.420.10 145 271 3.2E-11 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TF3313_2141 27fb9f3db898c67c4005c70938fede8c 389 Pfam PF13384 Homeodomain-like domain 7 44 1.2E-9 T 11-10-2018 TF3313_2141 27fb9f3db898c67c4005c70938fede8c 389 SUPERFAMILY SSF53098 143 304 4.93E-19 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TF3313_2141 27fb9f3db898c67c4005c70938fede8c 389 Pfam PF00665 Integrase core domain 146 260 7.6E-12 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 TF3313_2141 27fb9f3db898c67c4005c70938fede8c 389 SUPERFAMILY SSF46689 2 122 4.06E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TF3313_2141 27fb9f3db898c67c4005c70938fede8c 389 Gene3D G3DSA:1.10.10.60 4 46 5.3E-6 T 11-10-2018 TF3313_2141 27fb9f3db898c67c4005c70938fede8c 389 Gene3D G3DSA:3.30.420.10 145 271 3.2E-11 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TF3313_0429 27fb9f3db898c67c4005c70938fede8c 389 Pfam PF13384 Homeodomain-like domain 7 44 1.2E-9 T 11-10-2018 TF3313_0429 27fb9f3db898c67c4005c70938fede8c 389 SUPERFAMILY SSF53098 143 304 4.93E-19 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TF3313_0429 27fb9f3db898c67c4005c70938fede8c 389 Pfam PF00665 Integrase core domain 146 260 7.6E-12 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 TF3313_0429 27fb9f3db898c67c4005c70938fede8c 389 SUPERFAMILY SSF46689 2 122 4.06E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TF3313_0429 27fb9f3db898c67c4005c70938fede8c 389 Gene3D G3DSA:1.10.10.60 4 46 5.3E-6 T 11-10-2018 TF3313_0429 27fb9f3db898c67c4005c70938fede8c 389 Gene3D G3DSA:3.30.420.10 145 271 3.2E-11 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TF3313_2889 021b7a38d3b42bf89ff75358c0741625 362 SUPERFAMILY SSF55174 47 135 1.58E-13 T 11-10-2018 TF3313_2889 021b7a38d3b42bf89ff75358c0741625 362 SMART SM00363 48 113 3.3E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_2889 021b7a38d3b42bf89ff75358c0741625 362 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 45 353 2.1E-90 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 TF3313_2889 021b7a38d3b42bf89ff75358c0741625 362 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 169 183 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 TF3313_2889 021b7a38d3b42bf89ff75358c0741625 362 Pfam PF00849 RNA pseudouridylate synthase 122 280 2.3E-34 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TF3313_2889 021b7a38d3b42bf89ff75358c0741625 362 Gene3D G3DSA:3.10.290.10 36 100 6.1E-16 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TF3313_2889 021b7a38d3b42bf89ff75358c0741625 362 SUPERFAMILY SSF55120 106 355 1.06E-75 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TF3313_2889 021b7a38d3b42bf89ff75358c0741625 362 Pfam PF01479 S4 domain 49 94 1.1E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_2889 021b7a38d3b42bf89ff75358c0741625 362 Gene3D G3DSA:3.30.2350.10 115 357 1.0E-76 T 11-10-2018 TF3313_1438 98136979af5a01a9874057dec2f6d97c 330 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 3 321 34.025 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1438 98136979af5a01a9874057dec2f6d97c 330 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 263 322 3.0E-15 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1438 98136979af5a01a9874057dec2f6d97c 330 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 22 321 1.4E-109 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1438 98136979af5a01a9874057dec2f6d97c 330 SUPERFAMILY SSF56553 51 175 1.44E-31 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1438 98136979af5a01a9874057dec2f6d97c 330 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 252 312 6.6E-22 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1438 98136979af5a01a9874057dec2f6d97c 330 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 27 225 5.0E-24 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1438 98136979af5a01a9874057dec2f6d97c 330 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 57 155 1.9E-19 T 11-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1438 98136979af5a01a9874057dec2f6d97c 330 Gene3D G3DSA:3.30.1360.10 21 222 4.7E-81 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1438 98136979af5a01a9874057dec2f6d97c 330 SUPERFAMILY SSF47789 255 327 6.02E-22 T 11-10-2018 TF3313_1438 98136979af5a01a9874057dec2f6d97c 330 SUPERFAMILY SSF55257 4 228 2.65E-30 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1438 98136979af5a01a9874057dec2f6d97c 330 Gene3D G3DSA:2.170.120.12 51 174 4.7E-81 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1438 98136979af5a01a9874057dec2f6d97c 330 SMART SM00662 21 231 4.4E-70 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1438 98136979af5a01a9874057dec2f6d97c 330 Gene3D G3DSA:1.10.150.20 223 330 5.8E-26 T 11-10-2018 TF3313_2288 cd6efae07feddf65763822750cba1795 201 Pfam PF08281 Sigma-70, region 4 136 185 4.3E-12 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TF3313_2288 cd6efae07feddf65763822750cba1795 201 SUPERFAMILY SSF88659 123 190 5.23E-13 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TF3313_2288 cd6efae07feddf65763822750cba1795 201 Gene3D G3DSA:1.10.10.10 91 192 1.9E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_2288 cd6efae07feddf65763822750cba1795 201 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 188 1.1E-22 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TF3313_2288 cd6efae07feddf65763822750cba1795 201 SUPERFAMILY SSF88946 24 107 1.06E-16 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_2288 cd6efae07feddf65763822750cba1795 201 Gene3D G3DSA:1.10.1740.10 17 90 1.5E-10 T 11-10-2018 TF3313_2288 cd6efae07feddf65763822750cba1795 201 Pfam PF04542 Sigma-70 region 2 29 92 4.7E-10 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_2288 cd6efae07feddf65763822750cba1795 201 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 24 189 3.7E-53 T 11-10-2018 IPR014327 RNA polymerase sigma-70, Bacteroidetes type TF3313_2285 4feb6bbb7c800854d492a36783efed1c 193 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 15 193 3.7E-76 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 TF3313_2285 4feb6bbb7c800854d492a36783efed1c 193 SUPERFAMILY SSF55620 12 192 2.96E-76 T 11-10-2018 TF3313_2285 4feb6bbb7c800854d492a36783efed1c 193 Pfam PF01227 GTP cyclohydrolase I 15 191 1.4E-76 T 11-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 TF3313_2285 4feb6bbb7c800854d492a36783efed1c 193 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 72 88 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 TF3313_2285 4feb6bbb7c800854d492a36783efed1c 193 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 120 130 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 TF3313_2285 4feb6bbb7c800854d492a36783efed1c 193 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 10 192 38.228 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 TF3313_2285 4feb6bbb7c800854d492a36783efed1c 193 Gene3D G3DSA:1.10.286.10 3 58 1.0E-19 T 11-10-2018 TF3313_2285 4feb6bbb7c800854d492a36783efed1c 193 Gene3D G3DSA:3.30.1130.10 62 193 5.3E-58 T 11-10-2018 TF3313_0062 6f423c4f0010ebd50f7516749dfede4d 498 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 110 121 - T 11-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TF3313_0062 6f423c4f0010ebd50f7516749dfede4d 498 Gene3D G3DSA:3.20.20.70 100 479 2.9E-51 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_0062 6f423c4f0010ebd50f7516749dfede4d 498 Pfam PF13353 4Fe-4S single cluster domain 111 238 2.2E-10 T 11-10-2018 TF3313_0062 6f423c4f0010ebd50f7516749dfede4d 498 TIGRFAM TIGR04148 GG_samocin_CFB: radical SAM peptide maturase, GG-Bacteroidales family 90 495 3.2E-152 T 11-10-2018 IPR026407 Radical SAM peptide maturase, GG-Bacteroidales family TF3313_0062 6f423c4f0010ebd50f7516749dfede4d 498 SUPERFAMILY SSF102114 105 445 6.93E-31 T 11-10-2018 TF3313_0062 6f423c4f0010ebd50f7516749dfede4d 498 Pfam PF04055 Radical SAM superfamily 109 257 6.8E-13 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TF3313_2694 ed26dbb877731f345fb17de912ae1c15 937 Gene3D G3DSA:3.40.1360.10 171 293 5.9E-41 T 11-10-2018 TF3313_2694 ed26dbb877731f345fb17de912ae1c15 937 SMART SM00493 189 260 4.3E-15 T 11-10-2018 IPR006171 TOPRIM domain TF3313_2694 ed26dbb877731f345fb17de912ae1c15 937 TIGRFAM TIGR01391 dnaG: DNA primase 1 345 3.1E-99 T 11-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 TF3313_2694 ed26dbb877731f345fb17de912ae1c15 937 Pfam PF13732 Domain of unknown function (DUF4162) 843 929 7.3E-16 T 11-10-2018 IPR025302 Domain of unknown function DUF4162 TF3313_2694 ed26dbb877731f345fb17de912ae1c15 937 SUPERFAMILY SSF56731 42 350 1.65E-90 T 11-10-2018 TF3313_2694 ed26dbb877731f345fb17de912ae1c15 937 Pfam PF13155 Toprim-like 192 276 9.5E-18 T 11-10-2018 TF3313_2694 ed26dbb877731f345fb17de912ae1c15 937 Gene3D G3DSA:3.40.50.300 628 862 4.9E-55 T 11-10-2018 TF3313_2694 ed26dbb877731f345fb17de912ae1c15 937 Pfam PF00005 ABC transporter 649 789 2.7E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TF3313_2694 ed26dbb877731f345fb17de912ae1c15 937 SUPERFAMILY SSF52540 633 852 4.28E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2694 ed26dbb877731f345fb17de912ae1c15 937 ProSitePatterns PS00211 ABC transporters family signature. 762 776 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TF3313_2694 ed26dbb877731f345fb17de912ae1c15 937 SMART SM00382 658 851 2.2E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_2694 ed26dbb877731f345fb17de912ae1c15 937 Pfam PF08275 DNA primase catalytic core, N-terminal domain 57 181 3.4E-36 T 11-10-2018 IPR013264 DNA primase, catalytic core, N-terminal TF3313_2694 ed26dbb877731f345fb17de912ae1c15 937 Pfam PF10410 DnaB-helicase binding domain of primase 309 348 1.2E-4 T 11-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 TF3313_2694 ed26dbb877731f345fb17de912ae1c15 937 Gene3D G3DSA:3.90.980.10 37 170 3.9E-35 T 11-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily TF3313_1859 46a3924f1ce7aea9caa0baab29a40cbc 448 Gene3D G3DSA:3.30.70.3130 2 83 1.3E-18 T 11-10-2018 TF3313_1859 46a3924f1ce7aea9caa0baab29a40cbc 448 Gene3D G3DSA:2.30.130.60 385 444 2.8E-8 T 11-10-2018 TF3313_1859 46a3924f1ce7aea9caa0baab29a40cbc 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 70 84 1.9E-25 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase TF3313_1859 46a3924f1ce7aea9caa0baab29a40cbc 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 101 111 1.9E-25 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase TF3313_1859 46a3924f1ce7aea9caa0baab29a40cbc 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 271 288 1.9E-25 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase TF3313_1859 46a3924f1ce7aea9caa0baab29a40cbc 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 217 233 1.9E-25 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase TF3313_1859 46a3924f1ce7aea9caa0baab29a40cbc 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 167 179 1.9E-25 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase TF3313_1859 46a3924f1ce7aea9caa0baab29a40cbc 448 Pfam PF01189 16S rRNA methyltransferase RsmB/F 100 286 2.6E-36 T 11-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 TF3313_1859 46a3924f1ce7aea9caa0baab29a40cbc 448 SUPERFAMILY SSF53335 11 288 3.79E-53 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_1859 46a3924f1ce7aea9caa0baab29a40cbc 448 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 3 84 6.1E-24 T 11-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 TF3313_1859 46a3924f1ce7aea9caa0baab29a40cbc 448 Gene3D G3DSA:3.40.50.150 96 382 1.8E-70 T 11-10-2018 TF3313_1859 46a3924f1ce7aea9caa0baab29a40cbc 448 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 394 443 6.9E-15 T 11-10-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain TF3313_1587 7054acea83c5ea6c5b869964a57cc6fb 574 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 32 569 9.3E-162 T 11-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 TF3313_1587 7054acea83c5ea6c5b869964a57cc6fb 574 Gene3D G3DSA:3.10.310.30 325 448 5.3E-37 T 11-10-2018 TF3313_1587 7054acea83c5ea6c5b869964a57cc6fb 574 SUPERFAMILY SSF64182 57 457 3.79E-111 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily TF3313_1587 7054acea83c5ea6c5b869964a57cc6fb 574 Gene3D G3DSA:3.90.1640.30 57 324 3.1E-86 T 11-10-2018 TF3313_1587 7054acea83c5ea6c5b869964a57cc6fb 574 Pfam PF01368 DHH family 82 214 9.3E-11 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TF3313_1587 7054acea83c5ea6c5b869964a57cc6fb 574 Pfam PF02272 DHHA1 domain 321 440 3.2E-19 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 TF3313_1960 dcc5ec45d4df78070a719bab956bc500 428 Gene3D G3DSA:2.40.30.10 132 280 2.7E-49 T 11-10-2018 TF3313_1960 dcc5ec45d4df78070a719bab956bc500 428 SUPERFAMILY SSF63380 111 283 4.95E-33 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel TF3313_1960 dcc5ec45d4df78070a719bab956bc500 428 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 219 226 5.3E-7 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 TF3313_1960 dcc5ec45d4df78070a719bab956bc500 428 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 258 267 5.3E-7 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 TF3313_1960 dcc5ec45d4df78070a719bab956bc500 428 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 394 402 5.3E-7 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 TF3313_1960 dcc5ec45d4df78070a719bab956bc500 428 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 293 312 5.3E-7 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 TF3313_1960 dcc5ec45d4df78070a719bab956bc500 428 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 159 169 5.3E-7 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 TF3313_1960 dcc5ec45d4df78070a719bab956bc500 428 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 320 329 5.3E-7 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 TF3313_1960 dcc5ec45d4df78070a719bab956bc500 428 Gene3D G3DSA:3.10.20.30 41 131 4.3E-27 T 11-10-2018 IPR012675 Beta-grasp domain superfamily TF3313_1960 dcc5ec45d4df78070a719bab956bc500 428 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 14 428 3.0E-168 T 11-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 TF3313_1960 dcc5ec45d4df78070a719bab956bc500 428 Pfam PF00175 Oxidoreductase NAD-binding domain 295 408 6.6E-13 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 TF3313_1960 dcc5ec45d4df78070a719bab956bc500 428 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 9 428 59.637 T 11-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 TF3313_1960 dcc5ec45d4df78070a719bab956bc500 428 PIRSF PIRSF000044 6 428 4.5E-162 T 11-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 TF3313_1960 dcc5ec45d4df78070a719bab956bc500 428 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 45 121 8.2E-11 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 TF3313_1960 dcc5ec45d4df78070a719bab956bc500 428 Pfam PF00970 Oxidoreductase FAD-binding domain 212 283 4.0E-7 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 TF3313_1960 dcc5ec45d4df78070a719bab956bc500 428 SUPERFAMILY SSF54292 46 130 4.28E-22 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 TF3313_1960 dcc5ec45d4df78070a719bab956bc500 428 SUPERFAMILY SSF52343 273 424 1.27E-31 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TF3313_1960 dcc5ec45d4df78070a719bab956bc500 428 Gene3D G3DSA:3.40.50.80 285 428 1.2E-27 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TF3313_0335 0b14f214dd9553280101df8b2811c87d 149 Gene3D G3DSA:1.10.1510.10 1 92 6.4E-18 T 11-10-2018 TF3313_0335 0b14f214dd9553280101df8b2811c87d 149 Gene3D G3DSA:1.10.10.410 93 149 4.9E-18 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal TF3313_0335 0b14f214dd9553280101df8b2811c87d 149 Pfam PF09424 Yqey-like protein 5 148 3.2E-40 T 11-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 TF3313_0335 0b14f214dd9553280101df8b2811c87d 149 SUPERFAMILY SSF89095 1 148 7.32E-35 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 TF3313_2952 0d2b277880d5a0a17fa2174a812c3ef4 448 Pfam PF00342 Phosphoglucose isomerase 70 425 9.6E-24 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_2952 0d2b277880d5a0a17fa2174a812c3ef4 448 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 1 434 24.757 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_2952 0d2b277880d5a0a17fa2174a812c3ef4 448 Gene3D G3DSA:3.40.50.10490 224 416 4.2E-73 T 11-10-2018 TF3313_2952 0d2b277880d5a0a17fa2174a812c3ef4 448 Gene3D G3DSA:3.40.50.10490 39 223 4.9E-67 T 11-10-2018 TF3313_2952 0d2b277880d5a0a17fa2174a812c3ef4 448 SUPERFAMILY SSF53697 6 443 2.23E-126 T 11-10-2018 TF3313_2952 0d2b277880d5a0a17fa2174a812c3ef4 448 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 200 213 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_2952 0d2b277880d5a0a17fa2174a812c3ef4 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 196 214 4.1E-29 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_2952 0d2b277880d5a0a17fa2174a812c3ef4 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 375 393 4.1E-29 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_2952 0d2b277880d5a0a17fa2174a812c3ef4 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 393 407 4.1E-29 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_2952 0d2b277880d5a0a17fa2174a812c3ef4 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 407 420 4.1E-29 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_2952 0d2b277880d5a0a17fa2174a812c3ef4 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 75 94 4.1E-29 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_2952 0d2b277880d5a0a17fa2174a812c3ef4 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 272 293 4.1E-29 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_2952 0d2b277880d5a0a17fa2174a812c3ef4 448 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 407 424 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_1287 63f43225d3c0f7414e717cfc37d6e140 1062 Gene3D G3DSA:2.170.130.10 103 251 1.2E-32 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_1287 63f43225d3c0f7414e717cfc37d6e140 1062 SUPERFAMILY SSF49464 30 112 1.83E-17 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_1287 63f43225d3c0f7414e717cfc37d6e140 1062 Pfam PF00593 TonB dependent receptor 466 1060 2.8E-30 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_1287 63f43225d3c0f7414e717cfc37d6e140 1062 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 222 252 1.8E-19 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_1287 63f43225d3c0f7414e717cfc37d6e140 1062 Pfam PF07715 TonB-dependent Receptor Plug Domain 122 246 2.2E-22 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_1287 63f43225d3c0f7414e717cfc37d6e140 1062 Gene3D G3DSA:2.60.40.1120 31 102 1.1E-6 T 11-10-2018 TF3313_1287 63f43225d3c0f7414e717cfc37d6e140 1062 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 30 1062 3.8E-267 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_1287 63f43225d3c0f7414e717cfc37d6e140 1062 SUPERFAMILY SSF56935 110 1062 6.02E-96 T 11-10-2018 TF3313_1287 63f43225d3c0f7414e717cfc37d6e140 1062 Pfam PF13715 CarboxypepD_reg-like domain 32 114 1.8E-15 T 11-10-2018 TF3313_0199 8b82d49e33fb59326ae109edcdeaf9b5 590 Gene3D G3DSA:3.40.50.460 258 572 1.9E-235 T 11-10-2018 TF3313_0199 8b82d49e33fb59326ae109edcdeaf9b5 590 Gene3D G3DSA:3.40.50.450 52 538 1.9E-235 T 11-10-2018 TF3313_0199 8b82d49e33fb59326ae109edcdeaf9b5 590 Pfam PF00365 Phosphofructokinase 113 370 2.4E-38 T 11-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TF3313_0199 8b82d49e33fb59326ae109edcdeaf9b5 590 TIGRFAM TIGR02477 PFKA_PPi: diphosphate--fructose-6-phosphate 1-phosphotransferase 48 588 8.9E-258 T 11-10-2018 IPR011183 Pyrophosphate-dependent phosphofructokinase PfpB GO:0005524|GO:0006096|GO:0047334 TF3313_0199 8b82d49e33fb59326ae109edcdeaf9b5 590 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 237 254 1.5E-10 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TF3313_0199 8b82d49e33fb59326ae109edcdeaf9b5 590 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 115 134 1.5E-10 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TF3313_0199 8b82d49e33fb59326ae109edcdeaf9b5 590 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 204 220 1.5E-10 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TF3313_0199 8b82d49e33fb59326ae109edcdeaf9b5 590 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 340 352 1.5E-10 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TF3313_0199 8b82d49e33fb59326ae109edcdeaf9b5 590 PIRSF PIRSF005677 38 590 2.4E-238 T 11-10-2018 IPR011183 Pyrophosphate-dependent phosphofructokinase PfpB GO:0005524|GO:0006096|GO:0047334 TF3313_0199 8b82d49e33fb59326ae109edcdeaf9b5 590 Gene3D G3DSA:1.10.10.480 356 429 1.9E-235 T 11-10-2018 TF3313_0199 8b82d49e33fb59326ae109edcdeaf9b5 590 SUPERFAMILY SSF53784 48 587 1.01E-162 T 11-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TF3313_0199 8b82d49e33fb59326ae109edcdeaf9b5 590 Hamap MF_01980 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 44 590 44.357 T 11-10-2018 IPR011183 Pyrophosphate-dependent phosphofructokinase PfpB GO:0005524|GO:0006096|GO:0047334 TF3313_2344 954bcac2ccd34d6f0ba3da7399640bc5 493 Gene3D G3DSA:3.20.20.70 100 240 3.2E-8 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_2344 954bcac2ccd34d6f0ba3da7399640bc5 493 Gene3D G3DSA:2.60.40.10 395 489 1.4E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_2344 954bcac2ccd34d6f0ba3da7399640bc5 493 Pfam PF02638 Glycosyl hydrolase-like 10 28 299 1.2E-53 T 11-10-2018 IPR003790 Glycosyl hydrolase-like 10 TF3313_2344 954bcac2ccd34d6f0ba3da7399640bc5 493 SUPERFAMILY SSF49265 393 487 3.48E-7 T 11-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 TF3313_2344 954bcac2ccd34d6f0ba3da7399640bc5 493 SUPERFAMILY SSF51445 56 311 6.92E-19 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily TF3313_0881 2079017ce40bec30b43685b82fe1dfa7 945 Gene3D G3DSA:3.90.740.10 283 477 5.0E-152 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TF3313_0881 2079017ce40bec30b43685b82fe1dfa7 945 Gene3D G3DSA:2.30.210.10 648 718 5.0E-152 T 11-10-2018 TF3313_0881 2079017ce40bec30b43685b82fe1dfa7 945 Gene3D G3DSA:3.40.50.620 200 724 5.0E-152 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_0881 2079017ce40bec30b43685b82fe1dfa7 945 SUPERFAMILY SSF47323 761 944 4.86E-33 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_0881 2079017ce40bec30b43685b82fe1dfa7 945 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 199 945 7.1E-205 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TF3313_0881 2079017ce40bec30b43685b82fe1dfa7 945 SUPERFAMILY SSF50677 278 481 3.87E-44 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TF3313_0881 2079017ce40bec30b43685b82fe1dfa7 945 SUPERFAMILY SSF52374 3 767 1.27E-112 T 11-10-2018 TF3313_0881 2079017ce40bec30b43685b82fe1dfa7 945 Pfam PF08264 Anticodon-binding domain of tRNA 798 907 7.0E-17 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 TF3313_0881 2079017ce40bec30b43685b82fe1dfa7 945 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_0881 2079017ce40bec30b43685b82fe1dfa7 945 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 276 437 3.4E-57 T 11-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 TF3313_0881 2079017ce40bec30b43685b82fe1dfa7 945 Gene3D G3DSA:3.40.50.620 30 158 9.7E-49 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_0881 2079017ce40bec30b43685b82fe1dfa7 945 Gene3D G3DSA:1.10.730.10 725 883 8.1E-51 T 11-10-2018 TF3313_0881 2079017ce40bec30b43685b82fe1dfa7 945 Gene3D G3DSA:3.10.20.590 885 945 1.3E-18 T 11-10-2018 TF3313_0881 2079017ce40bec30b43685b82fe1dfa7 945 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 12 147 3.2E-14 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_0881 2079017ce40bec30b43685b82fe1dfa7 945 PRINTS PR00985 Leucyl-tRNA synthetase signature 126 143 8.5E-37 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TF3313_0881 2079017ce40bec30b43685b82fe1dfa7 945 PRINTS PR00985 Leucyl-tRNA synthetase signature 270 289 8.5E-37 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TF3313_0881 2079017ce40bec30b43685b82fe1dfa7 945 PRINTS PR00985 Leucyl-tRNA synthetase signature 241 254 8.5E-37 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TF3313_0881 2079017ce40bec30b43685b82fe1dfa7 945 PRINTS PR00985 Leucyl-tRNA synthetase signature 633 643 8.5E-37 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TF3313_0881 2079017ce40bec30b43685b82fe1dfa7 945 PRINTS PR00985 Leucyl-tRNA synthetase signature 561 579 8.5E-37 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TF3313_0881 2079017ce40bec30b43685b82fe1dfa7 945 PRINTS PR00985 Leucyl-tRNA synthetase signature 600 622 8.5E-37 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TF3313_0881 2079017ce40bec30b43685b82fe1dfa7 945 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 945 21.322 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TF3313_2918 e49285a34b6ad6611dffffd3c3b493a4 818 SUPERFAMILY SSF49464 24 109 5.1E-14 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_2918 e49285a34b6ad6611dffffd3c3b493a4 818 SUPERFAMILY SSF56935 108 818 2.47E-53 T 11-10-2018 TF3313_2918 e49285a34b6ad6611dffffd3c3b493a4 818 Gene3D G3DSA:2.60.40.1120 25 100 2.2E-7 T 11-10-2018 TF3313_2918 e49285a34b6ad6611dffffd3c3b493a4 818 Pfam PF13715 CarboxypepD_reg-like domain 26 111 1.5E-14 T 11-10-2018 TF3313_2918 e49285a34b6ad6611dffffd3c3b493a4 818 Pfam PF07715 TonB-dependent Receptor Plug Domain 138 217 3.4E-7 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_2918 e49285a34b6ad6611dffffd3c3b493a4 818 Gene3D G3DSA:2.170.130.10 101 225 4.2E-8 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_2405 b69e73afd112150011ade7b986d3379f 375 Gene3D G3DSA:3.40.50.300 1 129 2.4E-38 T 11-10-2018 TF3313_2405 b69e73afd112150011ade7b986d3379f 375 Gene3D G3DSA:3.40.50.880 130 375 6.2E-97 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TF3313_2405 b69e73afd112150011ade7b986d3379f 375 Pfam PF00117 Glutamine amidotransferase class-I 145 370 6.8E-50 T 11-10-2018 IPR017926 Glutamine amidotransferase TF3313_2405 b69e73afd112150011ade7b986d3379f 375 Pfam PF06418 CTP synthase N-terminus 1 109 2.2E-33 T 11-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 TF3313_2405 b69e73afd112150011ade7b986d3379f 375 SUPERFAMILY SSF52317 131 374 4.01E-73 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TF3313_2405 b69e73afd112150011ade7b986d3379f 375 SUPERFAMILY SSF52540 1 110 2.12E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1546 1e81c47eae169fc3f8be437c5ad48997 142 Pfam PF02657 Fe-S metabolism associated domain 11 130 4.7E-44 T 11-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like TF3313_1546 1e81c47eae169fc3f8be437c5ad48997 142 SUPERFAMILY SSF82649 7 135 1.2E-42 T 11-10-2018 TF3313_1546 1e81c47eae169fc3f8be437c5ad48997 142 Gene3D G3DSA:3.90.1010.10 2 142 3.7E-47 T 11-10-2018 TF3313_0431 85bf46cc0287d40d7b946a6a85747e19 1864 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 528 623 1.7E-17 T 11-10-2018 TF3313_0431 85bf46cc0287d40d7b946a6a85747e19 1864 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 996 1137 4.8E-17 T 11-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 TF3313_0431 85bf46cc0287d40d7b946a6a85747e19 1864 Pfam PF01835 MG2 domain 629 720 1.3E-14 T 11-10-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 TF3313_0431 85bf46cc0287d40d7b946a6a85747e19 1864 Gene3D G3DSA:1.50.10.20 1395 1658 5.9E-20 T 11-10-2018 TF3313_0431 85bf46cc0287d40d7b946a6a85747e19 1864 SMART SM01359 994 1137 1.9E-33 T 11-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 TF3313_0431 85bf46cc0287d40d7b946a6a85747e19 1864 SMART SM01360 1199 1288 1.6E-13 T 11-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 TF3313_0431 85bf46cc0287d40d7b946a6a85747e19 1864 Pfam PF00207 Alpha-2-macroglobulin family 1210 1287 6.4E-7 T 11-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 TF3313_0431 85bf46cc0287d40d7b946a6a85747e19 1864 SUPERFAMILY SSF48239 1399 1656 1.48E-28 T 11-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid TF3313_2185 3de6410c0aef89389e9f9177cfbdbd91 666 SMART SM00382 225 365 2.6E-23 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_2185 3de6410c0aef89389e9f9177cfbdbd91 666 Gene3D G3DSA:1.10.8.60 365 441 1.2E-28 T 11-10-2018 TF3313_2185 3de6410c0aef89389e9f9177cfbdbd91 666 ProSitePatterns PS00674 AAA-protein family signature. 333 351 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 TF3313_2185 3de6410c0aef89389e9f9177cfbdbd91 666 Pfam PF01434 Peptidase family M41 424 626 2.8E-72 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 TF3313_2185 3de6410c0aef89389e9f9177cfbdbd91 666 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 137 627 6.6E-213 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 TF3313_2185 3de6410c0aef89389e9f9177cfbdbd91 666 SUPERFAMILY SSF140990 446 634 7.85E-64 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 TF3313_2185 3de6410c0aef89389e9f9177cfbdbd91 666 Gene3D G3DSA:1.20.58.760 444 644 1.9E-66 T 11-10-2018 TF3313_2185 3de6410c0aef89389e9f9177cfbdbd91 666 SUPERFAMILY SSF52540 187 434 1.83E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2185 3de6410c0aef89389e9f9177cfbdbd91 666 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 230 362 3.6E-45 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TF3313_2185 3de6410c0aef89389e9f9177cfbdbd91 666 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 19 659 34.418 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 TF3313_2185 3de6410c0aef89389e9f9177cfbdbd91 666 Gene3D G3DSA:3.40.50.300 180 364 2.8E-68 T 11-10-2018 TF3313_1225 3b49bd46d3680a7465f166d65d6cc397 391 SUPERFAMILY SSF52540 3 245 1.02E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1225 3b49bd46d3680a7465f166d65d6cc397 391 Pfam PF13166 AAA domain 189 329 2.3E-11 T 11-10-2018 IPR026866 Protein CR006, P-loop domain TF3313_1225 3b49bd46d3680a7465f166d65d6cc397 391 Gene3D G3DSA:3.40.50.300 6 269 2.2E-8 T 11-10-2018 TF3313_2743 39fe5d29fde785ccfbc316f2fea4abc1 339 Gene3D G3DSA:3.30.470.10 1 163 4.4E-56 T 11-10-2018 TF3313_2743 39fe5d29fde785ccfbc316f2fea4abc1 339 SUPERFAMILY SSF56752 2 335 1.31E-98 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 TF3313_2743 39fe5d29fde785ccfbc316f2fea4abc1 339 PIRSF PIRSF006468 1 339 7.8E-121 T 11-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 TF3313_2743 39fe5d29fde785ccfbc316f2fea4abc1 339 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 29 335 4.0E-110 T 11-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 TF3313_2743 39fe5d29fde785ccfbc316f2fea4abc1 339 Gene3D G3DSA:3.20.10.10 164 339 6.5E-57 T 11-10-2018 TF3313_2743 39fe5d29fde785ccfbc316f2fea4abc1 339 Pfam PF01063 Amino-transferase class IV 55 292 1.4E-33 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 TF3313_1520 182ebc4dd39256530ba5c847763d0c38 403 Pfam PF00925 GTP cyclohydrolase II 212 375 5.8E-72 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 TF3313_1520 182ebc4dd39256530ba5c847763d0c38 403 Gene3D G3DSA:3.40.50.10990 208 379 3.7E-75 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 TF3313_1520 182ebc4dd39256530ba5c847763d0c38 403 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 4 201 5.6E-69 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TF3313_1520 182ebc4dd39256530ba5c847763d0c38 403 PIRSF PIRSF001259 2 403 1.8E-168 T 11-10-2018 TF3313_1520 182ebc4dd39256530ba5c847763d0c38 403 SUPERFAMILY SSF142695 206 378 2.09E-70 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 TF3313_1520 182ebc4dd39256530ba5c847763d0c38 403 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 8 200 5.9E-78 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TF3313_1520 182ebc4dd39256530ba5c847763d0c38 403 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 2 205 35.734 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TF3313_1520 182ebc4dd39256530ba5c847763d0c38 403 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 212 399 3.2E-76 T 11-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 TF3313_1520 182ebc4dd39256530ba5c847763d0c38 403 SUPERFAMILY SSF55821 5 208 3.66E-78 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily TF3313_1520 182ebc4dd39256530ba5c847763d0c38 403 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 206 401 39.744 T 11-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 TF3313_1520 182ebc4dd39256530ba5c847763d0c38 403 Gene3D G3DSA:3.90.870.10 1 207 1.9E-81 T 11-10-2018 TF3313_1520 182ebc4dd39256530ba5c847763d0c38 403 Hamap MF_01283 Riboflavin biosynthesis protein RibBA [ribBA]. 3 397 52.209 T 11-10-2018 IPR016299 Riboflavin biosynthesis protein RibBA GO:0009231 KEGG: 00740+3.5.4.25+4.1.99.12|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 TF3313_1107 42569cd9a7bc02829e1682dae6d3a12e 424 Gene3D G3DSA:3.90.600.10 332 424 1.0E-30 T 11-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TF3313_1107 42569cd9a7bc02829e1682dae6d3a12e 424 SMART SM01210 332 424 2.9E-41 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TF3313_1107 42569cd9a7bc02829e1682dae6d3a12e 424 Gene3D G3DSA:3.30.1490.20 123 193 7.1E-21 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TF3313_1107 42569cd9a7bc02829e1682dae6d3a12e 424 Gene3D G3DSA:3.30.470.20 194 329 7.4E-48 T 11-10-2018 TF3313_1107 42569cd9a7bc02829e1682dae6d3a12e 424 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 105 298 5.3E-67 T 11-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TF3313_1107 42569cd9a7bc02829e1682dae6d3a12e 424 SUPERFAMILY SSF51246 331 423 1.26E-27 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 TF3313_1107 42569cd9a7bc02829e1682dae6d3a12e 424 SMART SM01209 105 298 1.7E-114 T 11-10-2018 TF3313_1107 42569cd9a7bc02829e1682dae6d3a12e 424 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 333 422 1.2E-26 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TF3313_1107 42569cd9a7bc02829e1682dae6d3a12e 424 SUPERFAMILY SSF56059 106 321 2.65E-53 T 11-10-2018 TF3313_1107 42569cd9a7bc02829e1682dae6d3a12e 424 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 4.3E-141 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TF3313_1107 42569cd9a7bc02829e1682dae6d3a12e 424 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 424 37.15 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TF3313_1107 42569cd9a7bc02829e1682dae6d3a12e 424 Gene3D G3DSA:3.40.50.20 1 97 8.8E-32 T 11-10-2018 TF3313_1107 42569cd9a7bc02829e1682dae6d3a12e 424 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 104 7.0E-33 T 11-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TF3313_1107 42569cd9a7bc02829e1682dae6d3a12e 424 SUPERFAMILY SSF52440 1 105 9.5E-32 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TF3313_1398 fc4c8dce09a0d95c64920d1b2bc11881 580 Gene3D G3DSA:3.40.50.200 183 523 7.3E-83 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 TF3313_1398 fc4c8dce09a0d95c64920d1b2bc11881 580 SUPERFAMILY SSF52743 209 520 1.44E-69 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 TF3313_1398 fc4c8dce09a0d95c64920d1b2bc11881 580 Pfam PF00082 Subtilase family 224 509 1.9E-37 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 TF3313_1398 fc4c8dce09a0d95c64920d1b2bc11881 580 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 448 458 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site TF3313_1398 fc4c8dce09a0d95c64920d1b2bc11881 580 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 268 278 - T 11-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site TF3313_1398 fc4c8dce09a0d95c64920d1b2bc11881 580 PRINTS PR00723 Subtilisin serine protease family (S8) signature 222 241 5.4E-16 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related TF3313_1398 fc4c8dce09a0d95c64920d1b2bc11881 580 PRINTS PR00723 Subtilisin serine protease family (S8) signature 447 463 5.4E-16 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related TF3313_1398 fc4c8dce09a0d95c64920d1b2bc11881 580 PRINTS PR00723 Subtilisin serine protease family (S8) signature 264 277 5.4E-16 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related TF3313_0084 6a4bb28f1b954a60ebee9f579082685b 735 Gene3D G3DSA:3.40.50.300 489 733 1.2E-82 T 11-10-2018 TF3313_0084 6a4bb28f1b954a60ebee9f579082685b 735 Gene3D G3DSA:1.20.1560.10 162 478 3.1E-59 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TF3313_0084 6a4bb28f1b954a60ebee9f579082685b 735 Pfam PF03412 Peptidase C39 family 7 127 3.1E-32 T 11-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 TF3313_0084 6a4bb28f1b954a60ebee9f579082685b 735 ProSitePatterns PS00211 ABC transporters family signature. 632 646 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TF3313_0084 6a4bb28f1b954a60ebee9f579082685b 735 Pfam PF00005 ABC transporter 511 660 8.6E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TF3313_0084 6a4bb28f1b954a60ebee9f579082685b 735 SMART SM00382 520 706 3.1E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_0084 6a4bb28f1b954a60ebee9f579082685b 735 Gene3D G3DSA:3.90.70.10 1 155 1.2E-46 T 11-10-2018 TF3313_0084 6a4bb28f1b954a60ebee9f579082685b 735 SUPERFAMILY SSF52540 484 730 2.87E-80 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0084 6a4bb28f1b954a60ebee9f579082685b 735 Pfam PF00664 ABC transporter transmembrane region 181 447 7.7E-24 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TF3313_0084 6a4bb28f1b954a60ebee9f579082685b 735 SUPERFAMILY SSF90123 164 476 1.26E-57 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TF3313_0223 b2a5899a0ae991536535988fa8cfb079 305 SUPERFAMILY SSF52540 6 269 6.68E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0223 b2a5899a0ae991536535988fa8cfb079 305 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 6 298 22.838 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 TF3313_0223 b2a5899a0ae991536535988fa8cfb079 305 Pfam PF01715 IPP transferase 39 277 9.4E-60 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 TF3313_0223 b2a5899a0ae991536535988fa8cfb079 305 SUPERFAMILY SSF52540 6 147 4.5E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0223 b2a5899a0ae991536535988fa8cfb079 305 Gene3D G3DSA:1.10.20.140 116 179 1.3E-69 T 11-10-2018 TF3313_0223 b2a5899a0ae991536535988fa8cfb079 305 Gene3D G3DSA:3.40.50.300 10 287 1.3E-69 T 11-10-2018 TF3313_0223 b2a5899a0ae991536535988fa8cfb079 305 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 7 288 6.7E-55 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 TF3313_1418 7db7454a5c0eafd0b505216c7603c414 257 SMART SM00322 59 124 3.4E-5 T 11-10-2018 IPR004087 K Homology domain GO:0003676 TF3313_1418 7db7454a5c0eafd0b505216c7603c414 257 SUPERFAMILY SSF54814 2 105 3.14E-35 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 TF3313_1418 7db7454a5c0eafd0b505216c7603c414 257 Gene3D G3DSA:3.30.1140.32 107 207 2.7E-39 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1418 7db7454a5c0eafd0b505216c7603c414 257 SUPERFAMILY SSF54821 106 205 9.68E-39 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1418 7db7454a5c0eafd0b505216c7603c414 257 Pfam PF07650 KH domain 37 110 2.1E-19 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1418 7db7454a5c0eafd0b505216c7603c414 257 Gene3D G3DSA:3.30.300.20 17 106 1.1E-27 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta TF3313_1418 7db7454a5c0eafd0b505216c7603c414 257 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 35.928 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 TF3313_1418 7db7454a5c0eafd0b505216c7603c414 257 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 3.7E-85 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 TF3313_1418 7db7454a5c0eafd0b505216c7603c414 257 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 11-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1418 7db7454a5c0eafd0b505216c7603c414 257 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 2.4E-37 T 11-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1707 177de8a0b62efe67046fe01e2c48679a 184 Pfam PF12760 Transposase zinc-ribbon domain 11 55 5.8E-8 T 11-10-2018 IPR024442 Transposase, zinc-ribbon TF3313_1778 1c791634666846fd36f2bca0f7f20adb 276 Gene3D G3DSA:1.10.150.130 1 76 2.4E-14 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal TF3313_1778 1c791634666846fd36f2bca0f7f20adb 276 Gene3D G3DSA:1.10.443.10 90 269 2.0E-49 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TF3313_1778 1c791634666846fd36f2bca0f7f20adb 276 SUPERFAMILY SSF56349 25 267 5.89E-47 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TF3313_1778 1c791634666846fd36f2bca0f7f20adb 276 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 2 68 2.2E-8 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 TF3313_1778 1c791634666846fd36f2bca0f7f20adb 276 Pfam PF00589 Phage integrase family 109 261 1.1E-33 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TF3313_2767 fde093c96370be60089e6eacc0d9f3e6 812 Gene3D G3DSA:3.30.2130.10 377 462 1.7E-23 T 11-10-2018 TF3313_2767 fde093c96370be60089e6eacc0d9f3e6 812 PIRSF PIRSF000727 1 812 3.6E-286 T 11-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 TF3313_2767 fde093c96370be60089e6eacc0d9f3e6 812 SUPERFAMILY SSF55347 611 793 9.15E-44 T 11-10-2018 TF3313_2767 fde093c96370be60089e6eacc0d9f3e6 812 Gene3D G3DSA:1.20.120.1320 39 136 1.1E-90 T 11-10-2018 TF3313_2767 fde093c96370be60089e6eacc0d9f3e6 812 Gene3D G3DSA:3.40.50.720 463 809 3.0E-114 T 11-10-2018 TF3313_2767 fde093c96370be60089e6eacc0d9f3e6 812 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 TF3313_2767 fde093c96370be60089e6eacc0d9f3e6 812 Gene3D G3DSA:3.30.70.260 294 376 1.1E-20 T 11-10-2018 TF3313_2767 fde093c96370be60089e6eacc0d9f3e6 812 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 455 1.4E-117 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 TF3313_2767 fde093c96370be60089e6eacc0d9f3e6 812 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 468 603 2.7E-17 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 TF3313_2767 fde093c96370be60089e6eacc0d9f3e6 812 Pfam PF00742 Homoserine dehydrogenase 611 806 1.9E-49 T 11-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 TF3313_2767 fde093c96370be60089e6eacc0d9f3e6 812 Gene3D G3DSA:3.40.1160.10 3 288 1.1E-90 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TF3313_2767 fde093c96370be60089e6eacc0d9f3e6 812 Gene3D G3DSA:3.30.360.10 622 791 3.0E-114 T 11-10-2018 TF3313_2767 fde093c96370be60089e6eacc0d9f3e6 812 SUPERFAMILY SSF55021 385 461 3.97E-21 T 11-10-2018 TF3313_2767 fde093c96370be60089e6eacc0d9f3e6 812 Pfam PF00696 Amino acid kinase family 2 277 5.8E-40 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 TF3313_2767 fde093c96370be60089e6eacc0d9f3e6 812 SUPERFAMILY SSF55021 299 381 2.06E-21 T 11-10-2018 TF3313_2767 fde093c96370be60089e6eacc0d9f3e6 812 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 657 679 - T 11-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 TF3313_2767 fde093c96370be60089e6eacc0d9f3e6 812 SUPERFAMILY SSF53633 1 291 1.44E-72 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TF3313_2767 fde093c96370be60089e6eacc0d9f3e6 812 SUPERFAMILY SSF51735 459 632 2.33E-29 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_2767 fde093c96370be60089e6eacc0d9f3e6 812 Pfam PF13840 ACT domain 387 452 7.6E-7 T 11-10-2018 IPR027795 CASTOR, ACT domain TF3313_2767 fde093c96370be60089e6eacc0d9f3e6 812 Pfam PF13840 ACT domain 313 370 1.0E-8 T 11-10-2018 IPR027795 CASTOR, ACT domain TF3313_1572 842e2c6c9eeaa60f81e8eeffce0fe6a2 1194 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 317 347 3.4E-16 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_1572 842e2c6c9eeaa60f81e8eeffce0fe6a2 1194 Pfam PF00593 TonB dependent receptor 580 1158 2.8E-27 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_1572 842e2c6c9eeaa60f81e8eeffce0fe6a2 1194 SUPERFAMILY SSF49464 141 209 2.49E-12 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_1572 842e2c6c9eeaa60f81e8eeffce0fe6a2 1194 Gene3D G3DSA:2.170.130.10 216 346 1.1E-25 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_1572 842e2c6c9eeaa60f81e8eeffce0fe6a2 1194 Pfam PF13715 CarboxypepD_reg-like domain 143 226 2.5E-16 T 11-10-2018 TF3313_1572 842e2c6c9eeaa60f81e8eeffce0fe6a2 1194 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 143 1194 4.3E-226 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_1572 842e2c6c9eeaa60f81e8eeffce0fe6a2 1194 SUPERFAMILY SSF56935 223 1193 5.49E-81 T 11-10-2018 TF3313_1572 842e2c6c9eeaa60f81e8eeffce0fe6a2 1194 Gene3D G3DSA:2.60.40.1120 143 215 2.9E-6 T 11-10-2018 TF3313_1572 842e2c6c9eeaa60f81e8eeffce0fe6a2 1194 Pfam PF07715 TonB-dependent Receptor Plug Domain 235 341 6.6E-20 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_0508 8012e7a7c8db58cc712733c56d9805fd 372 SUPERFAMILY SSF53756 1 361 1.62E-60 T 11-10-2018 TF3313_0508 8012e7a7c8db58cc712733c56d9805fd 372 Pfam PF13439 Glycosyltransferase Family 4 16 177 5.6E-21 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 TF3313_0508 8012e7a7c8db58cc712733c56d9805fd 372 Gene3D G3DSA:3.40.50.2000 185 342 7.3E-30 T 11-10-2018 TF3313_0508 8012e7a7c8db58cc712733c56d9805fd 372 Pfam PF00534 Glycosyl transferases group 1 189 338 2.2E-26 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 TF3313_0508 8012e7a7c8db58cc712733c56d9805fd 372 Gene3D G3DSA:3.40.50.2000 1 184 1.6E-26 T 11-10-2018 TF3313_2583 dffc68b84514bcb7354961024e3e4c17 190 Pfam PF01066 CDP-alcohol phosphatidyltransferase 8 69 1.8E-10 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TF3313_2583 dffc68b84514bcb7354961024e3e4c17 190 Gene3D G3DSA:1.20.120.1760 5 170 1.1E-9 T 11-10-2018 TF3313_2583 dffc68b84514bcb7354961024e3e4c17 190 SUPERFAMILY SSF47954 80 150 3.78E-5 T 11-10-2018 IPR036915 Cyclin-like superfamily TF3313_2583 dffc68b84514bcb7354961024e3e4c17 190 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 47 69 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TF3313_0368 2e7cb5fa2f1549ff27920ad914f9bc1c 286 SUPERFAMILY SSF88659 127 199 3.44E-14 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TF3313_0368 2e7cb5fa2f1549ff27920ad914f9bc1c 286 SUPERFAMILY SSF88946 14 123 6.28E-42 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_0368 2e7cb5fa2f1549ff27920ad914f9bc1c 286 Pfam PF04539 Sigma-70 region 3 135 206 1.1E-16 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 TF3313_0368 2e7cb5fa2f1549ff27920ad914f9bc1c 286 Gene3D G3DSA:1.10.10.10 205 286 4.4E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_0368 2e7cb5fa2f1549ff27920ad914f9bc1c 286 PRINTS PR00046 Major sigma-70 factor signature 261 272 2.2E-25 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TF3313_0368 2e7cb5fa2f1549ff27920ad914f9bc1c 286 PRINTS PR00046 Major sigma-70 factor signature 246 261 2.2E-25 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TF3313_0368 2e7cb5fa2f1549ff27920ad914f9bc1c 286 PRINTS PR00046 Major sigma-70 factor signature 78 91 2.2E-25 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TF3313_0368 2e7cb5fa2f1549ff27920ad914f9bc1c 286 PRINTS PR00046 Major sigma-70 factor signature 226 238 2.2E-25 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TF3313_0368 2e7cb5fa2f1549ff27920ad914f9bc1c 286 PRINTS PR00046 Major sigma-70 factor signature 102 110 2.2E-25 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TF3313_0368 2e7cb5fa2f1549ff27920ad914f9bc1c 286 Gene3D G3DSA:1.10.601.10 3 123 1.3E-43 T 11-10-2018 TF3313_0368 2e7cb5fa2f1549ff27920ad914f9bc1c 286 Pfam PF04542 Sigma-70 region 2 55 123 4.9E-18 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_0368 2e7cb5fa2f1549ff27920ad914f9bc1c 286 Gene3D G3DSA:1.10.10.10 127 202 5.0E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_0368 2e7cb5fa2f1549ff27920ad914f9bc1c 286 Pfam PF00140 Sigma-70 factor, region 1.2 17 48 1.4E-11 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TF3313_0368 2e7cb5fa2f1549ff27920ad914f9bc1c 286 PIRSF PIRSF000770 8 284 5.9E-37 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TF3313_0368 2e7cb5fa2f1549ff27920ad914f9bc1c 286 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 50 274 2.0E-35 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TF3313_0368 2e7cb5fa2f1549ff27920ad914f9bc1c 286 SUPERFAMILY SSF88659 188 285 2.99E-22 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TF3313_0368 2e7cb5fa2f1549ff27920ad914f9bc1c 286 Pfam PF04545 Sigma-70, region 4 222 274 3.3E-18 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 TF3313_0126 d39c257a476b68f790c2332242068fca 791 Pfam PF02687 FtsX-like permease family 309 396 1.2E-5 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TF3313_0126 d39c257a476b68f790c2332242068fca 791 Pfam PF02687 FtsX-like permease family 696 782 8.3E-7 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TF3313_0126 d39c257a476b68f790c2332242068fca 791 Pfam PF12704 MacB-like periplasmic core domain 24 238 3.4E-8 T 11-10-2018 IPR025857 MacB-like periplasmic core domain TF3313_0126 d39c257a476b68f790c2332242068fca 791 Pfam PF12704 MacB-like periplasmic core domain 422 637 3.3E-7 T 11-10-2018 IPR025857 MacB-like periplasmic core domain TF3313_1252 e3db9ccb0129955f4902623b0b6c9818 461 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 3 230 9.5E-56 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 TF3313_1252 e3db9ccb0129955f4902623b0b6c9818 461 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 302 35.738 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 TF3313_1252 e3db9ccb0129955f4902623b0b6c9818 461 SUPERFAMILY SSF54637 321 459 1.78E-43 T 11-10-2018 IPR029069 HotDog domain superfamily TF3313_1252 e3db9ccb0129955f4902623b0b6c9818 461 SUPERFAMILY SSF54211 3 125 1.14E-35 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TF3313_1252 e3db9ccb0129955f4902623b0b6c9818 461 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 319 459 32.336 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 TF3313_1252 e3db9ccb0129955f4902623b0b6c9818 461 Gene3D G3DSA:3.30.1700.10 128 313 5.2E-43 T 11-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 TF3313_1252 e3db9ccb0129955f4902623b0b6c9818 461 Gene3D G3DSA:3.30.230.20 1 127 5.7E-44 T 11-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 TF3313_1252 e3db9ccb0129955f4902623b0b6c9818 461 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 297 2.1E-94 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 TF3313_1252 e3db9ccb0129955f4902623b0b6c9818 461 Gene3D G3DSA:3.10.129.10 314 461 3.0E-56 T 11-10-2018 TF3313_1252 e3db9ccb0129955f4902623b0b6c9818 461 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 319 456 3.4E-52 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 TF3313_1252 e3db9ccb0129955f4902623b0b6c9818 461 SUPERFAMILY SSF54211 137 300 6.75E-37 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TF3313_1252 e3db9ccb0129955f4902623b0b6c9818 461 Pfam PF07977 FabA-like domain 328 452 1.0E-32 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 TF3313_1501 7d21ecaa3b67f144f21cff8541ca5935 780 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 483 1.2E-184 T 11-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 TF3313_1501 7d21ecaa3b67f144f21cff8541ca5935 780 Gene3D G3DSA:1.10.460.10 136 485 9.5E-119 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 TF3313_1501 7d21ecaa3b67f144f21cff8541ca5935 780 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 162 180 5.0E-35 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TF3313_1501 7d21ecaa3b67f144f21cff8541ca5935 780 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 282 291 5.0E-35 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TF3313_1501 7d21ecaa3b67f144f21cff8541ca5935 780 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 354 370 5.0E-35 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TF3313_1501 7d21ecaa3b67f144f21cff8541ca5935 780 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 5.0E-35 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TF3313_1501 7d21ecaa3b67f144f21cff8541ca5935 780 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 461 475 5.0E-35 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TF3313_1501 7d21ecaa3b67f144f21cff8541ca5935 780 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 277 291 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 TF3313_1501 7d21ecaa3b67f144f21cff8541ca5935 780 SMART SM00436 104 192 2.4E-43 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 TF3313_1501 7d21ecaa3b67f144f21cff8541ca5935 780 Gene3D G3DSA:3.40.50.140 1 134 1.3E-53 T 11-10-2018 TF3313_1501 7d21ecaa3b67f144f21cff8541ca5935 780 Pfam PF13368 Topoisomerase C-terminal repeat 726 772 2.7E-13 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat TF3313_1501 7d21ecaa3b67f144f21cff8541ca5935 780 Pfam PF13368 Topoisomerase C-terminal repeat 597 657 3.9E-14 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat TF3313_1501 7d21ecaa3b67f144f21cff8541ca5935 780 Pfam PF13368 Topoisomerase C-terminal repeat 664 712 7.5E-13 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat TF3313_1501 7d21ecaa3b67f144f21cff8541ca5935 780 Gene3D G3DSA:2.70.20.10 184 444 9.5E-119 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 TF3313_1501 7d21ecaa3b67f144f21cff8541ca5935 780 SMART SM00437 240 496 2.5E-98 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 TF3313_1501 7d21ecaa3b67f144f21cff8541ca5935 780 Gene3D G3DSA:1.10.460.10 492 585 1.0E-14 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 TF3313_1501 7d21ecaa3b67f144f21cff8541ca5935 780 Pfam PF01751 Toprim domain 5 113 9.0E-28 T 11-10-2018 IPR006171 TOPRIM domain TF3313_1501 7d21ecaa3b67f144f21cff8541ca5935 780 SUPERFAMILY SSF56712 3 605 4.97E-178 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain TF3313_1501 7d21ecaa3b67f144f21cff8541ca5935 780 Gene3D G3DSA:1.10.290.10 248 368 9.5E-119 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 TF3313_1501 7d21ecaa3b67f144f21cff8541ca5935 780 SMART SM00493 3 103 1.7E-28 T 11-10-2018 IPR006171 TOPRIM domain TF3313_1501 7d21ecaa3b67f144f21cff8541ca5935 780 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 681 49.886 T 11-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 TF3313_1501 7d21ecaa3b67f144f21cff8541ca5935 780 Pfam PF01131 DNA topoisomerase 502 566 5.7E-9 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TF3313_1501 7d21ecaa3b67f144f21cff8541ca5935 780 Pfam PF01131 DNA topoisomerase 128 483 1.0E-107 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TF3313_2663 7810c64a5f7a7244b95e66ad55aaa8de 303 Gene3D G3DSA:1.20.120.1760 10 214 7.2E-34 T 11-10-2018 TF3313_2663 7810c64a5f7a7244b95e66ad55aaa8de 303 Pfam PF01066 CDP-alcohol phosphatidyltransferase 41 107 1.7E-12 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TF3313_1908 69598c8d7f40a8bb074be7e5fae49bb0 748 Gene3D G3DSA:2.40.170.20 266 741 5.3E-65 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_1908 69598c8d7f40a8bb074be7e5fae49bb0 748 SUPERFAMILY SSF56935 112 738 4.27E-105 T 11-10-2018 TF3313_1908 69598c8d7f40a8bb074be7e5fae49bb0 748 Gene3D G3DSA:2.170.130.10 106 237 2.2E-30 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_1908 69598c8d7f40a8bb074be7e5fae49bb0 748 Pfam PF13715 CarboxypepD_reg-like domain 32 115 5.6E-20 T 11-10-2018 TF3313_1908 69598c8d7f40a8bb074be7e5fae49bb0 748 Pfam PF07715 TonB-dependent Receptor Plug Domain 125 232 4.0E-21 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_1908 69598c8d7f40a8bb074be7e5fae49bb0 748 SUPERFAMILY SSF49464 32 119 6.93E-15 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_1908 69598c8d7f40a8bb074be7e5fae49bb0 748 Pfam PF00593 TonB dependent receptor 319 740 8.3E-45 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_1908 69598c8d7f40a8bb074be7e5fae49bb0 748 Gene3D G3DSA:2.60.40.1120 32 105 3.1E-12 T 11-10-2018 TF3313_0320 df5813710aeab59d0916fe5a9bd9cbe9 368 Gene3D G3DSA:2.40.420.20 288 356 1.3E-38 T 11-10-2018 TF3313_0320 df5813710aeab59d0916fe5a9bd9cbe9 368 SUPERFAMILY SSF111369 67 282 1.44E-12 T 11-10-2018 TF3313_0320 df5813710aeab59d0916fe5a9bd9cbe9 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 50 360 4.6E-39 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TF3313_0320 df5813710aeab59d0916fe5a9bd9cbe9 368 Gene3D G3DSA:2.40.50.100 74 213 1.3E-38 T 11-10-2018 TF3313_0320 df5813710aeab59d0916fe5a9bd9cbe9 368 Gene3D G3DSA:2.40.30.170 67 287 1.3E-38 T 11-10-2018 TF3313_0320 df5813710aeab59d0916fe5a9bd9cbe9 368 Gene3D G3DSA:1.10.287.470 108 174 1.3E-38 T 11-10-2018 TF3313_0320 df5813710aeab59d0916fe5a9bd9cbe9 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 69 259 5.4E-15 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TF3313_1012 17340b39897995db84aadf5266d11aad 487 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 32 472 1.5E-79 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TF3313_1012 17340b39897995db84aadf5266d11aad 487 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 65 84 1.1E-13 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TF3313_1012 17340b39897995db84aadf5266d11aad 487 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 367 381 1.1E-13 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TF3313_1012 17340b39897995db84aadf5266d11aad 487 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 382 396 1.1E-13 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TF3313_1012 17340b39897995db84aadf5266d11aad 487 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 53 467 4.2E-63 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TF3313_1012 17340b39897995db84aadf5266d11aad 487 SUPERFAMILY SSF56601 24 474 9.27E-72 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TF3313_1012 17340b39897995db84aadf5266d11aad 487 Gene3D G3DSA:3.50.80.20 94 176 5.3E-18 T 11-10-2018 TF3313_1012 17340b39897995db84aadf5266d11aad 487 Gene3D G3DSA:3.40.710.10 292 486 1.7E-45 T 11-10-2018 TF3313_1012 17340b39897995db84aadf5266d11aad 487 Gene3D G3DSA:3.40.710.10 33 93 2.3E-8 T 11-10-2018 TF3313_2533 a52c1a8ffe7a04db82f4364828382923 323 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 39 315 1.6E-107 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 TF3313_2533 a52c1a8ffe7a04db82f4364828382923 323 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 289 302 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TF3313_2533 a52c1a8ffe7a04db82f4364828382923 323 Gene3D G3DSA:3.40.50.300 100 304 8.8E-110 T 11-10-2018 TF3313_2533 a52c1a8ffe7a04db82f4364828382923 323 SUPERFAMILY SSF52540 113 316 8.62E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2533 a52c1a8ffe7a04db82f4364828382923 323 Gene3D G3DSA:1.20.120.140 14 314 8.8E-110 T 11-10-2018 TF3313_2533 a52c1a8ffe7a04db82f4364828382923 323 SUPERFAMILY SSF47364 13 90 2.75E-18 T 11-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 TF3313_2533 a52c1a8ffe7a04db82f4364828382923 323 Pfam PF00448 SRP54-type protein, GTPase domain 116 315 1.3E-76 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TF3313_2533 a52c1a8ffe7a04db82f4364828382923 323 Pfam PF02881 SRP54-type protein, helical bundle domain 28 91 1.0E-12 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TF3313_2533 a52c1a8ffe7a04db82f4364828382923 323 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 39 316 59.113 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 TF3313_2533 a52c1a8ffe7a04db82f4364828382923 323 SMART SM00962 115 316 3.0E-115 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TF3313_2533 a52c1a8ffe7a04db82f4364828382923 323 SMART SM00382 114 310 6.4E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_2533 a52c1a8ffe7a04db82f4364828382923 323 SMART SM00963 15 96 4.3E-21 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TF3313_2476 58a387f34cda827decd58104e5635780 349 SMART SM00062 45 274 1.0E-26 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TF3313_2476 58a387f34cda827decd58104e5635780 349 Gene3D G3DSA:3.40.190.10 130 231 4.8E-62 T 11-10-2018 TF3313_2476 58a387f34cda827decd58104e5635780 349 Gene3D G3DSA:3.40.190.10 39 269 4.8E-62 T 11-10-2018 TF3313_2476 58a387f34cda827decd58104e5635780 349 SUPERFAMILY SSF53850 46 271 6.25E-39 T 11-10-2018 TF3313_2476 58a387f34cda827decd58104e5635780 349 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 57 271 1.0E-29 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TF3313_1847 fe1cfbbcc64c56c11102e09a3edae8a8 241 SUPERFAMILY SSF46894 133 227 4.82E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TF3313_1847 fe1cfbbcc64c56c11102e09a3edae8a8 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 226 3.7E-17 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TF3313_1847 fe1cfbbcc64c56c11102e09a3edae8a8 241 Pfam PF00072 Response regulator receiver domain 7 116 1.8E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TF3313_1847 fe1cfbbcc64c56c11102e09a3edae8a8 241 Gene3D G3DSA:3.40.50.2300 1 131 2.8E-36 T 11-10-2018 TF3313_1847 fe1cfbbcc64c56c11102e09a3edae8a8 241 Gene3D G3DSA:1.10.10.10 132 239 2.1E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_1847 fe1cfbbcc64c56c11102e09a3edae8a8 241 SMART SM00862 151 226 1.1E-14 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TF3313_1847 fe1cfbbcc64c56c11102e09a3edae8a8 241 SMART SM00448 5 116 3.4E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TF3313_1847 fe1cfbbcc64c56c11102e09a3edae8a8 241 SUPERFAMILY SSF52172 3 124 8.97E-38 T 11-10-2018 IPR011006 CheY-like superfamily TF3313_0886 ac221e7070b1f71eb282e9de2a053445 635 ProSitePatterns PS00455 Putative AMP-binding domain signature. 218 229 - T 11-10-2018 IPR020845 AMP-binding, conserved site TF3313_0886 ac221e7070b1f71eb282e9de2a053445 635 Gene3D G3DSA:3.40.50.12780 29 330 1.1E-43 T 11-10-2018 TF3313_0886 ac221e7070b1f71eb282e9de2a053445 635 Pfam PF00501 AMP-binding enzyme 44 504 5.1E-78 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TF3313_0886 ac221e7070b1f71eb282e9de2a053445 635 SUPERFAMILY SSF56801 34 634 3.01E-97 T 11-10-2018 TF3313_0886 ac221e7070b1f71eb282e9de2a053445 635 Gene3D G3DSA:3.40.50.12780 365 495 3.2E-26 T 11-10-2018 TF3313_0937 80b7c6dd7564c2e33f2c7da21c194e3f 934 SMART SM00474 340 521 9.1E-31 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 TF3313_0937 80b7c6dd7564c2e33f2c7da21c194e3f 934 Gene3D G3DSA:1.20.1060.10 546 662 1.7E-42 T 11-10-2018 TF3313_0937 80b7c6dd7564c2e33f2c7da21c194e3f 934 ProSitePatterns PS00447 DNA polymerase family A signature. 759 778 - T 11-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TF3313_0937 80b7c6dd7564c2e33f2c7da21c194e3f 934 Pfam PF00476 DNA polymerase family A 553 930 5.2E-156 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TF3313_0937 80b7c6dd7564c2e33f2c7da21c194e3f 934 TIGRFAM TIGR00593 pola: DNA polymerase I 3 933 1.8E-302 T 11-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TF3313_0937 80b7c6dd7564c2e33f2c7da21c194e3f 934 Gene3D G3DSA:3.30.420.10 337 544 3.4E-62 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TF3313_0937 80b7c6dd7564c2e33f2c7da21c194e3f 934 SUPERFAMILY SSF53098 345 521 1.3E-44 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TF3313_0937 80b7c6dd7564c2e33f2c7da21c194e3f 934 SMART SM00475 1 261 5.2E-117 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 TF3313_0937 80b7c6dd7564c2e33f2c7da21c194e3f 934 Gene3D G3DSA:3.40.50.1010 3 277 3.8E-91 T 11-10-2018 TF3313_0937 80b7c6dd7564c2e33f2c7da21c194e3f 934 Pfam PF01612 3'-5' exonuclease 341 520 2.5E-37 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 TF3313_0937 80b7c6dd7564c2e33f2c7da21c194e3f 934 SMART SM00279 173 208 1.1E-12 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 TF3313_0937 80b7c6dd7564c2e33f2c7da21c194e3f 934 SUPERFAMILY SSF47807 174 285 7.03E-33 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily TF3313_0937 80b7c6dd7564c2e33f2c7da21c194e3f 934 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 2 169 1.0E-48 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 TF3313_0937 80b7c6dd7564c2e33f2c7da21c194e3f 934 SMART SM00482 690 897 1.2E-107 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TF3313_0937 80b7c6dd7564c2e33f2c7da21c194e3f 934 SUPERFAMILY SSF88723 2 153 9.81E-50 T 11-10-2018 IPR029060 PIN-like domain superfamily TF3313_0937 80b7c6dd7564c2e33f2c7da21c194e3f 934 SUPERFAMILY SSF56672 527 933 1.67E-154 T 11-10-2018 TF3313_0937 80b7c6dd7564c2e33f2c7da21c194e3f 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 659 681 3.8E-74 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TF3313_0937 80b7c6dd7564c2e33f2c7da21c194e3f 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 682 697 3.8E-74 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TF3313_0937 80b7c6dd7564c2e33f2c7da21c194e3f 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 759 784 3.8E-74 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TF3313_0937 80b7c6dd7564c2e33f2c7da21c194e3f 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 735 748 3.8E-74 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TF3313_0937 80b7c6dd7564c2e33f2c7da21c194e3f 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 850 866 3.8E-74 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TF3313_0937 80b7c6dd7564c2e33f2c7da21c194e3f 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 818 829 3.8E-74 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TF3313_0937 80b7c6dd7564c2e33f2c7da21c194e3f 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 880 893 3.8E-74 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TF3313_0937 80b7c6dd7564c2e33f2c7da21c194e3f 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 705 728 3.8E-74 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TF3313_0937 80b7c6dd7564c2e33f2c7da21c194e3f 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 796 807 3.8E-74 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TF3313_0937 80b7c6dd7564c2e33f2c7da21c194e3f 934 Gene3D G3DSA:1.10.150.20 714 857 2.5E-106 T 11-10-2018 TF3313_0937 80b7c6dd7564c2e33f2c7da21c194e3f 934 Gene3D G3DSA:1.10.150.20 174 246 3.8E-91 T 11-10-2018 TF3313_0937 80b7c6dd7564c2e33f2c7da21c194e3f 934 Gene3D G3DSA:3.30.70.370 669 929 2.5E-106 T 11-10-2018 TF3313_0937 80b7c6dd7564c2e33f2c7da21c194e3f 934 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 175 265 9.2E-29 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 TF3313_1606 27206cfb75ccdb054f61c4804edfca8a 152 PIRSF PIRSF000077 32 149 7.5E-30 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 TF3313_1606 27206cfb75ccdb054f61c4804edfca8a 152 SUPERFAMILY SSF52833 27 150 8.21E-31 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TF3313_1606 27206cfb75ccdb054f61c4804edfca8a 152 Gene3D G3DSA:3.40.30.10 26 152 9.6E-38 T 11-10-2018 TF3313_1606 27206cfb75ccdb054f61c4804edfca8a 152 TIGRFAM TIGR01068 thioredoxin: thioredoxin 59 147 3.3E-32 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 TF3313_1606 27206cfb75ccdb054f61c4804edfca8a 152 ProSitePatterns PS00194 Thioredoxin family active site. 66 84 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 TF3313_1606 27206cfb75ccdb054f61c4804edfca8a 152 PRINTS PR00421 Thioredoxin family signature 65 73 6.9E-7 T 11-10-2018 TF3313_1606 27206cfb75ccdb054f61c4804edfca8a 152 PRINTS PR00421 Thioredoxin family signature 113 124 6.9E-7 T 11-10-2018 TF3313_1606 27206cfb75ccdb054f61c4804edfca8a 152 PRINTS PR00421 Thioredoxin family signature 73 82 6.9E-7 T 11-10-2018 TF3313_1606 27206cfb75ccdb054f61c4804edfca8a 152 Pfam PF00085 Thioredoxin 61 146 9.6E-26 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 TF3313_0718 ba58f5632e98eccffe7cc14b1312c8dd 894 Gene3D G3DSA:3.30.1360.40 254 346 2.7E-105 T 11-10-2018 TF3313_0718 ba58f5632e98eccffe7cc14b1312c8dd 894 SMART SM00434 51 487 1.8E-81 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TF3313_0718 ba58f5632e98eccffe7cc14b1312c8dd 894 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 72 483 9.8E-107 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TF3313_0718 ba58f5632e98eccffe7cc14b1312c8dd 894 Gene3D G3DSA:1.10.268.10 383 481 2.7E-105 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TF3313_0718 ba58f5632e98eccffe7cc14b1312c8dd 894 SUPERFAMILY SSF56719 53 510 8.11E-103 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TF3313_0718 ba58f5632e98eccffe7cc14b1312c8dd 894 Gene3D G3DSA:3.90.199.10 72 506 2.7E-105 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 TF3313_0118 19a177205ccfb3bcf6be277ef0925af6 249 Gene3D G3DSA:3.40.50.2300 8 134 1.9E-25 T 11-10-2018 TF3313_0118 19a177205ccfb3bcf6be277ef0925af6 249 SMART SM00448 14 122 6.3E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TF3313_0118 19a177205ccfb3bcf6be277ef0925af6 249 Pfam PF00072 Response regulator receiver domain 17 121 4.3E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TF3313_0118 19a177205ccfb3bcf6be277ef0925af6 249 Gene3D G3DSA:2.40.50.40 135 212 1.7E-16 T 11-10-2018 TF3313_0118 19a177205ccfb3bcf6be277ef0925af6 249 Pfam PF04397 LytTr DNA-binding domain 154 241 6.5E-19 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 TF3313_0118 19a177205ccfb3bcf6be277ef0925af6 249 SUPERFAMILY SSF52172 12 133 6.26E-26 T 11-10-2018 IPR011006 CheY-like superfamily TF3313_0118 19a177205ccfb3bcf6be277ef0925af6 249 SMART SM00850 152 243 4.0E-25 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 TF3313_1251 72185ffe86750a49bf03f546a56b5a29 260 Gene3D G3DSA:1.20.1180.10 190 255 1.5E-20 T 11-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 TF3313_1251 72185ffe86750a49bf03f546a56b5a29 260 SUPERFAMILY SSF51161 2 255 5.62E-70 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily TF3313_1251 72185ffe86750a49bf03f546a56b5a29 260 Gene3D G3DSA:2.160.10.10 3 188 1.4E-51 T 11-10-2018 TF3313_1251 72185ffe86750a49bf03f546a56b5a29 260 PIRSF PIRSF000456 1 260 2.2E-98 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 TF3313_1251 72185ffe86750a49bf03f546a56b5a29 260 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 173 254 2.0E-23 T 11-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 TF3313_1251 72185ffe86750a49bf03f546a56b5a29 260 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 29 64 3.0E-8 T 11-10-2018 IPR001451 Hexapeptide repeat TF3313_1251 72185ffe86750a49bf03f546a56b5a29 260 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 102 135 3.1E-6 T 11-10-2018 IPR001451 Hexapeptide repeat TF3313_1251 72185ffe86750a49bf03f546a56b5a29 260 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 4 254 9.5E-99 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 TF3313_0376 4e605c28cd19905f8150fd17af24b56b 506 Pfam PF00117 Glutamine amidotransferase class-I 7 184 1.3E-30 T 11-10-2018 IPR017926 Glutamine amidotransferase TF3313_0376 4e605c28cd19905f8150fd17af24b56b 506 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 7.6E-6 T 11-10-2018 TF3313_0376 4e605c28cd19905f8150fd17af24b56b 506 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 7.6E-6 T 11-10-2018 TF3313_0376 4e605c28cd19905f8150fd17af24b56b 506 PRINTS PR00096 Glutamine amidotransferase superfamily signature 163 176 7.6E-6 T 11-10-2018 TF3313_0376 4e605c28cd19905f8150fd17af24b56b 506 SUPERFAMILY SSF52317 3 228 8.4E-46 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TF3313_0376 4e605c28cd19905f8150fd17af24b56b 506 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 2 506 51.302 T 11-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 TF3313_0376 4e605c28cd19905f8150fd17af24b56b 506 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 198 506 5.1E-142 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 TF3313_0376 4e605c28cd19905f8150fd17af24b56b 506 Gene3D G3DSA:3.40.50.880 1 190 1.3E-45 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TF3313_0376 4e605c28cd19905f8150fd17af24b56b 506 SUPERFAMILY SSF54810 386 506 1.96E-50 T 11-10-2018 TF3313_0376 4e605c28cd19905f8150fd17af24b56b 506 SUPERFAMILY SSF52402 183 427 5.51E-52 T 11-10-2018 TF3313_0376 4e605c28cd19905f8150fd17af24b56b 506 Gene3D G3DSA:3.30.300.10 387 506 2.3E-51 T 11-10-2018 TF3313_0376 4e605c28cd19905f8150fd17af24b56b 506 Pfam PF00958 GMP synthase C terminal domain 416 505 5.1E-44 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 TF3313_0376 4e605c28cd19905f8150fd17af24b56b 506 Gene3D G3DSA:3.40.50.620 194 386 5.4E-71 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_0376 4e605c28cd19905f8150fd17af24b56b 506 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 5 190 5.8E-56 T 11-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 TF3313_0376 4e605c28cd19905f8150fd17af24b56b 506 Pfam PF02540 NAD synthase 203 277 3.5E-7 T 11-10-2018 IPR022310 NAD/GMP synthase TF3313_2216 df0b2c761cb1d785c4bc3af12ff97048 485 Gene3D G3DSA:3.40.630.10 365 485 4.4E-24 T 11-10-2018 TF3313_2216 df0b2c761cb1d785c4bc3af12ff97048 485 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 7 483 2.7E-179 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TF3313_2216 df0b2c761cb1d785c4bc3af12ff97048 485 Pfam PF01546 Peptidase family M20/M25/M40 73 478 9.8E-22 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 TF3313_2216 df0b2c761cb1d785c4bc3af12ff97048 485 SUPERFAMILY SSF53187 12 483 1.01E-57 T 11-10-2018 TF3313_2216 df0b2c761cb1d785c4bc3af12ff97048 485 Gene3D G3DSA:3.40.630.10 2 236 1.0E-57 T 11-10-2018 TF3313_2216 df0b2c761cb1d785c4bc3af12ff97048 485 PIRSF PIRSF016599 1 485 5.1E-196 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TF3313_2216 df0b2c761cb1d785c4bc3af12ff97048 485 Pfam PF07687 Peptidase dimerisation domain 213 292 2.3E-6 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain TF3313_2216 df0b2c761cb1d785c4bc3af12ff97048 485 PRINTS PR00934 X-His dipeptidase (M25) signature 429 445 1.1E-67 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TF3313_2216 df0b2c761cb1d785c4bc3af12ff97048 485 PRINTS PR00934 X-His dipeptidase (M25) signature 206 223 1.1E-67 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TF3313_2216 df0b2c761cb1d785c4bc3af12ff97048 485 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 1.1E-67 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TF3313_2216 df0b2c761cb1d785c4bc3af12ff97048 485 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 1.1E-67 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TF3313_2216 df0b2c761cb1d785c4bc3af12ff97048 485 PRINTS PR00934 X-His dipeptidase (M25) signature 251 270 1.1E-67 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TF3313_2216 df0b2c761cb1d785c4bc3af12ff97048 485 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 1.1E-67 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TF3313_2216 df0b2c761cb1d785c4bc3af12ff97048 485 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 1.1E-67 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TF3313_2216 df0b2c761cb1d785c4bc3af12ff97048 485 PRINTS PR00934 X-His dipeptidase (M25) signature 364 382 1.1E-67 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TF3313_2216 df0b2c761cb1d785c4bc3af12ff97048 485 PRINTS PR00934 X-His dipeptidase (M25) signature 451 473 1.1E-67 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TF3313_0512 41e37ad428b131bdd451655509ce41de 249 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 19 232 7.8E-29 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 TF3313_0512 41e37ad428b131bdd451655509ce41de 249 Gene3D G3DSA:3.20.20.190 2 246 5.1E-57 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 TF3313_0512 41e37ad428b131bdd451655509ce41de 249 SUPERFAMILY SSF51695 9 236 7.74E-52 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 TF3313_1417 c1437045ad20645a7f5cc18f0af575f4 143 Pfam PF00237 Ribosomal protein L22p/L17e 22 126 2.6E-29 T 11-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 TF3313_1417 c1437045ad20645a7f5cc18f0af575f4 143 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 18 129 23.781 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1417 c1437045ad20645a7f5cc18f0af575f4 143 Gene3D G3DSA:3.90.470.10 16 143 9.5E-39 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 TF3313_1417 c1437045ad20645a7f5cc18f0af575f4 143 SUPERFAMILY SSF54843 15 129 3.79E-33 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 TF3313_1417 c1437045ad20645a7f5cc18f0af575f4 143 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 22 126 1.8E-29 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_0650 0d99f272bb67fea934e2a7adb0f2cdf9 489 SUPERFAMILY SSF48208 47 488 1.06E-186 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 TF3313_0650 0d99f272bb67fea934e2a7adb0f2cdf9 489 PIRSF PIRSF028846 54 487 3.4E-190 T 11-10-2018 IPR008313 Metal-independent alpha-mannosidase TF3313_0650 0d99f272bb67fea934e2a7adb0f2cdf9 489 Gene3D G3DSA:1.50.10.10 59 489 2.0E-188 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 TF3313_0650 0d99f272bb67fea934e2a7adb0f2cdf9 489 Pfam PF06824 Metal-independent alpha-mannosidase (GH125) 75 475 1.2E-166 T 11-10-2018 IPR008313 Metal-independent alpha-mannosidase TF3313_0650 0d99f272bb67fea934e2a7adb0f2cdf9 489 SMART SM01149 75 476 6.3E-264 T 11-10-2018 IPR008313 Metal-independent alpha-mannosidase TF3313_1493 bd917038df40b7e7a67d93083ac4b6ed 206 Gene3D G3DSA:3.40.50.10240 2 206 6.6E-62 T 11-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 TF3313_1493 bd917038df40b7e7a67d93083ac4b6ed 206 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 8 202 8.9E-41 T 11-10-2018 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 TF3313_1493 bd917038df40b7e7a67d93083ac4b6ed 206 SUPERFAMILY SSF63999 6 126 3.27E-30 T 11-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 TF3313_1493 bd917038df40b7e7a67d93083ac4b6ed 206 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 32 123 7.5E-20 T 11-10-2018 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 TF3313_1757 944725ef17a28990a9ca5b02cad6f0c3 479 Gene3D G3DSA:3.90.780.10 291 470 5.1E-33 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TF3313_1757 944725ef17a28990a9ca5b02cad6f0c3 479 SUPERFAMILY SSF56300 18 285 4.75E-69 T 11-10-2018 TF3313_1757 944725ef17a28990a9ca5b02cad6f0c3 479 ProSitePatterns PS00786 5'-nucleotidase signature 2. 90 101 - T 11-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TF3313_1757 944725ef17a28990a9ca5b02cad6f0c3 479 Pfam PF02872 5'-nucleotidase, C-terminal domain 305 430 4.1E-30 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TF3313_1757 944725ef17a28990a9ca5b02cad6f0c3 479 Gene3D G3DSA:3.60.21.10 17 290 1.7E-63 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like TF3313_1757 944725ef17a28990a9ca5b02cad6f0c3 479 Pfam PF00149 Calcineurin-like phosphoesterase 25 223 2.9E-11 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TF3313_1757 944725ef17a28990a9ca5b02cad6f0c3 479 PRINTS PR01607 Apyrase family signature 22 40 8.9E-29 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TF3313_1757 944725ef17a28990a9ca5b02cad6f0c3 479 PRINTS PR01607 Apyrase family signature 413 432 8.9E-29 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TF3313_1757 944725ef17a28990a9ca5b02cad6f0c3 479 PRINTS PR01607 Apyrase family signature 206 229 8.9E-29 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TF3313_1757 944725ef17a28990a9ca5b02cad6f0c3 479 PRINTS PR01607 Apyrase family signature 187 204 8.9E-29 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TF3313_1757 944725ef17a28990a9ca5b02cad6f0c3 479 PRINTS PR01607 Apyrase family signature 341 364 8.9E-29 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TF3313_1757 944725ef17a28990a9ca5b02cad6f0c3 479 PRINTS PR01607 Apyrase family signature 234 254 8.9E-29 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TF3313_1757 944725ef17a28990a9ca5b02cad6f0c3 479 SUPERFAMILY SSF55816 301 470 3.79E-31 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TF3313_1432 6ea253868d09bdbbeeff7275d1443937 446 Gene3D G3DSA:1.10.3370.10 3 427 3.5E-156 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TF3313_1432 6ea253868d09bdbbeeff7275d1443937 446 SUPERFAMILY SSF103491 3 422 2.62E-113 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TF3313_1432 6ea253868d09bdbbeeff7275d1443937 446 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 17 425 8.5E-114 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TF3313_1432 6ea253868d09bdbbeeff7275d1443937 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 20 38 3.3E-86 T 11-10-2018 TF3313_1432 6ea253868d09bdbbeeff7275d1443937 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 310 332 3.3E-86 T 11-10-2018 TF3313_1432 6ea253868d09bdbbeeff7275d1443937 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 151 176 3.3E-86 T 11-10-2018 TF3313_1432 6ea253868d09bdbbeeff7275d1443937 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 177 200 3.3E-86 T 11-10-2018 TF3313_1432 6ea253868d09bdbbeeff7275d1443937 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 3.3E-86 T 11-10-2018 TF3313_1432 6ea253868d09bdbbeeff7275d1443937 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 365 383 3.3E-86 T 11-10-2018 TF3313_1432 6ea253868d09bdbbeeff7275d1443937 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 400 418 3.3E-86 T 11-10-2018 TF3313_1432 6ea253868d09bdbbeeff7275d1443937 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 72 92 3.3E-86 T 11-10-2018 TF3313_1432 6ea253868d09bdbbeeff7275d1443937 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 113 136 3.3E-86 T 11-10-2018 TF3313_1432 6ea253868d09bdbbeeff7275d1443937 446 PIRSF PIRSF004557 1 438 2.3E-116 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TF3313_1432 6ea253868d09bdbbeeff7275d1443937 446 ProSitePatterns PS00755 Protein secY signature 1. 73 92 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TF3313_1432 6ea253868d09bdbbeeff7275d1443937 446 Hamap MF_01465 Protein translocase subunit SecY [secY]. 7 431 28.277 T 11-10-2018 IPR026593 Protein translocase subunit SecY TF3313_1432 6ea253868d09bdbbeeff7275d1443937 446 Pfam PF00344 SecY translocase 73 414 4.3E-109 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TF3313_2232 870887cb2a49d21eaa34ef275afd6a95 452 TIGRFAM TIGR00797 matE: MATE efflux family protein 18 418 2.8E-84 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TF3313_2232 870887cb2a49d21eaa34ef275afd6a95 452 Pfam PF01554 MatE 18 177 1.2E-27 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TF3313_2232 870887cb2a49d21eaa34ef275afd6a95 452 Pfam PF01554 MatE 244 405 9.3E-33 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TF3313_2232 870887cb2a49d21eaa34ef275afd6a95 452 PIRSF PIRSF006603 6 448 3.4E-71 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TF3313_1358 5fa903306fa5eece462aeebe2c06530e 382 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 3.0E-28 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TF3313_1358 5fa903306fa5eece462aeebe2c06530e 382 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 377 4.3E-52 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TF3313_1358 5fa903306fa5eece462aeebe2c06530e 382 Gene3D G3DSA:1.10.540.10 1 120 4.5E-42 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TF3313_1358 5fa903306fa5eece462aeebe2c06530e 382 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TF3313_1358 5fa903306fa5eece462aeebe2c06530e 382 Gene3D G3DSA:1.20.140.10 235 382 3.4E-56 T 11-10-2018 TF3313_1358 5fa903306fa5eece462aeebe2c06530e 382 Gene3D G3DSA:2.40.110.10 121 234 1.8E-44 T 11-10-2018 TF3313_1358 5fa903306fa5eece462aeebe2c06530e 382 SUPERFAMILY SSF56645 1 242 9.56E-89 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TF3313_1358 5fa903306fa5eece462aeebe2c06530e 382 PIRSF PIRSF016578 2 381 4.8E-23 T 11-10-2018 TF3313_1358 5fa903306fa5eece462aeebe2c06530e 382 SUPERFAMILY SSF47203 228 380 6.6E-60 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TF3313_1358 5fa903306fa5eece462aeebe2c06530e 382 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 2.5E-37 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TF3313_1358 5fa903306fa5eece462aeebe2c06530e 382 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TF3313_1228 6753dfef88dc7924010e32db19817713 515 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 6 503 1.6E-197 T 11-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 TF3313_1228 6753dfef88dc7924010e32db19817713 515 Pfam PF02384 N-6 DNA Methylase 171 481 1.9E-111 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 TF3313_1228 6753dfef88dc7924010e32db19817713 515 Pfam PF12161 HsdM N-terminal domain 10 157 1.4E-16 T 11-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain TF3313_1228 6753dfef88dc7924010e32db19817713 515 Gene3D G3DSA:3.40.50.150 193 475 8.7E-79 T 11-10-2018 TF3313_1228 6753dfef88dc7924010e32db19817713 515 SUPERFAMILY SSF53335 8 514 1.42E-122 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_1228 6753dfef88dc7924010e32db19817713 515 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 297 303 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TF3313_1228 6753dfef88dc7924010e32db19817713 515 Gene3D G3DSA:1.20.1260.30 2 189 1.5E-50 T 11-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily TF3313_1228 6753dfef88dc7924010e32db19817713 515 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 294 306 1.2E-21 T 11-10-2018 TF3313_1228 6753dfef88dc7924010e32db19817713 515 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 195 211 1.2E-21 T 11-10-2018 TF3313_1228 6753dfef88dc7924010e32db19817713 515 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 221 235 1.2E-21 T 11-10-2018 TF3313_1228 6753dfef88dc7924010e32db19817713 515 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 332 356 1.2E-21 T 11-10-2018 TF3313_1776 7d38d7bb799638fe0bc7ce5c58bbaf41 244 Gene3D G3DSA:2.160.10.10 73 244 1.5E-58 T 11-10-2018 TF3313_1776 7d38d7bb799638fe0bc7ce5c58bbaf41 244 SUPERFAMILY SSF51161 77 237 4.34E-47 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily TF3313_1776 7d38d7bb799638fe0bc7ce5c58bbaf41 244 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 85 117 7.1E-7 T 11-10-2018 IPR001451 Hexapeptide repeat TF3313_1776 7d38d7bb799638fe0bc7ce5c58bbaf41 244 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 161 194 7.6E-8 T 11-10-2018 IPR001451 Hexapeptide repeat TF3313_0090 9f693793a79bc3f050b6abf613713cca 465 Gene3D G3DSA:3.30.930.10 104 464 6.9E-110 T 11-10-2018 TF3313_0090 9f693793a79bc3f050b6abf613713cca 465 Gene3D G3DSA:2.40.50.140 1 103 2.6E-21 T 11-10-2018 TF3313_0090 9f693793a79bc3f050b6abf613713cca 465 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 4 465 44.966 T 11-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 TF3313_0090 9f693793a79bc3f050b6abf613713cca 465 SUPERFAMILY SSF55681 94 463 2.6E-93 T 11-10-2018 TF3313_0090 9f693793a79bc3f050b6abf613713cca 465 SUPERFAMILY SSF50249 1 100 8.88E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TF3313_0090 9f693793a79bc3f050b6abf613713cca 465 PRINTS PR01042 Aspartyl-tRNA synthetase signature 420 434 1.7E-13 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_0090 9f693793a79bc3f050b6abf613713cca 465 PRINTS PR01042 Aspartyl-tRNA synthetase signature 204 216 1.7E-13 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_0090 9f693793a79bc3f050b6abf613713cca 465 PRINTS PR01042 Aspartyl-tRNA synthetase signature 220 233 1.7E-13 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_0090 9f693793a79bc3f050b6abf613713cca 465 PRINTS PR01042 Aspartyl-tRNA synthetase signature 380 396 1.7E-13 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_0090 9f693793a79bc3f050b6abf613713cca 465 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 465 4.0E-186 T 11-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 TF3313_0090 9f693793a79bc3f050b6abf613713cca 465 Pfam PF00152 tRNA synthetases class II (D, K and N) 115 459 7.4E-84 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_0090 9f693793a79bc3f050b6abf613713cca 465 Pfam PF01336 OB-fold nucleic acid binding domain 19 97 1.9E-12 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 TF3313_1424 8a6577e0faa6599c98263fff90abaad3 186 PIRSF PIRSF002161 2 186 8.8E-61 T 11-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1424 8a6577e0faa6599c98263fff90abaad3 186 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 5 182 40.593 T 11-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1424 8a6577e0faa6599c98263fff90abaad3 186 Pfam PF00673 ribosomal L5P family C-terminus 88 180 6.5E-37 T 11-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1424 8a6577e0faa6599c98263fff90abaad3 186 Pfam PF00281 Ribosomal protein L5 28 84 1.2E-23 T 11-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1424 8a6577e0faa6599c98263fff90abaad3 186 Gene3D G3DSA:3.30.1440.10 4 182 6.9E-72 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1424 8a6577e0faa6599c98263fff90abaad3 186 SUPERFAMILY SSF55282 8 182 4.94E-67 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_0370 5010b5ffc320199207b7b373a7030f4d 544 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 37 204 8.1E-39 T 11-10-2018 IPR024618 Domain of unknown function DUF3857 TF3313_0370 5010b5ffc320199207b7b373a7030f4d 544 Gene3D G3DSA:2.60.40.3140 18 223 6.7E-80 T 11-10-2018 TF3313_0370 5010b5ffc320199207b7b373a7030f4d 544 Pfam PF12970 Domain of Unknown Function with PDB structure (DUF3858) 428 540 2.7E-37 T 11-10-2018 IPR024544 Domain of unknown function DUF3858 TF3313_0370 5010b5ffc320199207b7b373a7030f4d 544 Gene3D G3DSA:2.60.120.1130 412 543 1.4E-39 T 11-10-2018 TF3313_0370 5010b5ffc320199207b7b373a7030f4d 544 Gene3D G3DSA:3.10.620.30 233 378 8.0E-20 T 11-10-2018 TF3313_1909 15f3c858b1c3c9be84712b750feefef9 744 Gene3D G3DSA:2.40.170.20 243 737 2.4E-64 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_1909 15f3c858b1c3c9be84712b750feefef9 744 SUPERFAMILY SSF56935 108 729 5.1E-104 T 11-10-2018 TF3313_1909 15f3c858b1c3c9be84712b750feefef9 744 Gene3D G3DSA:2.170.130.10 112 241 4.7E-32 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_1909 15f3c858b1c3c9be84712b750feefef9 744 Gene3D G3DSA:2.60.40.1120 34 111 3.0E-13 T 11-10-2018 TF3313_1909 15f3c858b1c3c9be84712b750feefef9 744 Pfam PF07715 TonB-dependent Receptor Plug Domain 129 236 8.8E-21 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_1909 15f3c858b1c3c9be84712b750feefef9 744 SUPERFAMILY SSF49464 33 118 8.11E-19 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_1909 15f3c858b1c3c9be84712b750feefef9 744 Pfam PF00593 TonB dependent receptor 314 717 2.5E-44 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_1909 15f3c858b1c3c9be84712b750feefef9 744 Pfam PF13715 CarboxypepD_reg-like domain 35 120 2.3E-21 T 11-10-2018 TF3313_2609 3f5536e09be6bbbc5418f4a7ca515b74 595 Pfam PF00009 Elongation factor Tu GTP binding domain 3 180 4.5E-54 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TF3313_2609 3f5536e09be6bbbc5418f4a7ca515b74 595 Gene3D G3DSA:3.40.50.300 1 184 1.1E-71 T 11-10-2018 TF3313_2609 3f5536e09be6bbbc5418f4a7ca515b74 595 Hamap MF_00071 Elongation factor 4 [lepA]. 1 595 283.075 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 TF3313_2609 3f5536e09be6bbbc5418f4a7ca515b74 595 Pfam PF06421 GTP-binding protein LepA C-terminus 487 593 1.7E-50 T 11-10-2018 IPR013842 GTP-binding protein LepA, C-terminal TF3313_2609 3f5536e09be6bbbc5418f4a7ca515b74 595 SUPERFAMILY SSF52540 2 225 2.9E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2609 3f5536e09be6bbbc5418f4a7ca515b74 595 Pfam PF00679 Elongation factor G C-terminus 398 485 6.8E-18 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like TF3313_2609 3f5536e09be6bbbc5418f4a7ca515b74 595 Gene3D G3DSA:3.30.70.2570 479 553 3.8E-35 T 11-10-2018 IPR038363 LepA, C-terminal domain superfamily TF3313_2609 3f5536e09be6bbbc5418f4a7ca515b74 595 SUPERFAMILY SSF54980 291 369 1.69E-18 T 11-10-2018 IPR035647 EF-G domain III/V-like TF3313_2609 3f5536e09be6bbbc5418f4a7ca515b74 595 Gene3D G3DSA:2.40.30.10 185 284 1.5E-31 T 11-10-2018 TF3313_2609 3f5536e09be6bbbc5418f4a7ca515b74 595 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 173 7.5E-19 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TF3313_2609 3f5536e09be6bbbc5418f4a7ca515b74 595 Gene3D G3DSA:3.30.70.3380 367 478 3.4E-36 T 11-10-2018 TF3313_2609 3f5536e09be6bbbc5418f4a7ca515b74 595 SUPERFAMILY SSF54980 398 493 1.34E-20 T 11-10-2018 IPR035647 EF-G domain III/V-like TF3313_2609 3f5536e09be6bbbc5418f4a7ca515b74 595 Gene3D G3DSA:3.30.70.870 285 366 2.1E-35 T 11-10-2018 TF3313_2609 3f5536e09be6bbbc5418f4a7ca515b74 595 Pfam PF03144 Elongation factor Tu domain 2 205 274 5.8E-9 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 TF3313_2609 3f5536e09be6bbbc5418f4a7ca515b74 595 TIGRFAM TIGR01393 lepA: elongation factor 4 3 594 1.2E-302 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 TF3313_2609 3f5536e09be6bbbc5418f4a7ca515b74 595 PRINTS PR00315 GTP-binding elongation factor signature 6 19 6.5E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TF3313_2609 3f5536e09be6bbbc5418f4a7ca515b74 595 PRINTS PR00315 GTP-binding elongation factor signature 89 100 6.5E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TF3313_2609 3f5536e09be6bbbc5418f4a7ca515b74 595 PRINTS PR00315 GTP-binding elongation factor signature 125 134 6.5E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TF3313_2609 3f5536e09be6bbbc5418f4a7ca515b74 595 PRINTS PR00315 GTP-binding elongation factor signature 49 57 6.5E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TF3313_2609 3f5536e09be6bbbc5418f4a7ca515b74 595 PRINTS PR00315 GTP-binding elongation factor signature 73 83 6.5E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TF3313_0633 52b5f134b7402bf591d170be722bdf7f 192 Gene3D G3DSA:1.10.520.20 7 100 3.3E-10 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0633 52b5f134b7402bf591d170be722bdf7f 192 PRINTS PR00125 ATP synthase delta subunit signature 87 101 6.9E-13 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0633 52b5f134b7402bf591d170be722bdf7f 192 PRINTS PR00125 ATP synthase delta subunit signature 76 87 6.9E-13 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0633 52b5f134b7402bf591d170be722bdf7f 192 PRINTS PR00125 ATP synthase delta subunit signature 137 152 6.9E-13 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0633 52b5f134b7402bf591d170be722bdf7f 192 PRINTS PR00125 ATP synthase delta subunit signature 7 26 6.9E-13 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0633 52b5f134b7402bf591d170be722bdf7f 192 PRINTS PR00125 ATP synthase delta subunit signature 152 170 6.9E-13 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0633 52b5f134b7402bf591d170be722bdf7f 192 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 176 2.9E-37 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0633 52b5f134b7402bf591d170be722bdf7f 192 SUPERFAMILY SSF47928 7 107 1.96E-17 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0633 52b5f134b7402bf591d170be722bdf7f 192 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 179 16.513 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0633 52b5f134b7402bf591d170be722bdf7f 192 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 177 3.8E-29 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0910 2accde4a801c1009c877f73d5eedd429 697 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 575 666 4.1E-19 T 11-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 TF3313_0910 2accde4a801c1009c877f73d5eedd429 697 SUPERFAMILY SSF51011 574 667 8.4E-17 T 11-10-2018 TF3313_0910 2accde4a801c1009c877f73d5eedd429 697 Gene3D G3DSA:2.60.40.1180 572 670 2.4E-25 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta TF3313_0910 2accde4a801c1009c877f73d5eedd429 697 Pfam PF00128 Alpha amylase, catalytic domain 204 284 3.3E-8 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TF3313_0910 2accde4a801c1009c877f73d5eedd429 697 SUPERFAMILY SSF81296 45 150 2.8E-19 T 11-10-2018 IPR014756 Immunoglobulin E-set TF3313_0910 2accde4a801c1009c877f73d5eedd429 697 PIRSF PIRSF000463 1 677 8.0E-199 T 11-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 TF3313_0910 2accde4a801c1009c877f73d5eedd429 697 Gene3D G3DSA:3.20.20.80 10 559 5.3E-246 T 11-10-2018 TF3313_0910 2accde4a801c1009c877f73d5eedd429 697 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 52 121 1.1E-13 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 TF3313_0910 2accde4a801c1009c877f73d5eedd429 697 SUPERFAMILY SSF51445 161 566 9.27E-86 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily TF3313_0910 2accde4a801c1009c877f73d5eedd429 697 SMART SM00642 174 537 2.8E-6 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TF3313_0910 2accde4a801c1009c877f73d5eedd429 697 Gene3D G3DSA:2.60.40.10 47 155 5.3E-246 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_0787 2accde4a801c1009c877f73d5eedd429 697 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 575 666 4.1E-19 T 11-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 TF3313_0787 2accde4a801c1009c877f73d5eedd429 697 SUPERFAMILY SSF51011 574 667 8.4E-17 T 11-10-2018 TF3313_0787 2accde4a801c1009c877f73d5eedd429 697 Gene3D G3DSA:2.60.40.1180 572 670 2.4E-25 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta TF3313_0787 2accde4a801c1009c877f73d5eedd429 697 Pfam PF00128 Alpha amylase, catalytic domain 204 284 3.3E-8 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TF3313_0787 2accde4a801c1009c877f73d5eedd429 697 SUPERFAMILY SSF81296 45 150 2.8E-19 T 11-10-2018 IPR014756 Immunoglobulin E-set TF3313_0787 2accde4a801c1009c877f73d5eedd429 697 PIRSF PIRSF000463 1 677 8.0E-199 T 11-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 TF3313_0787 2accde4a801c1009c877f73d5eedd429 697 Gene3D G3DSA:3.20.20.80 10 559 5.3E-246 T 11-10-2018 TF3313_0787 2accde4a801c1009c877f73d5eedd429 697 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 52 121 1.1E-13 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 TF3313_0787 2accde4a801c1009c877f73d5eedd429 697 SUPERFAMILY SSF51445 161 566 9.27E-86 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily TF3313_0787 2accde4a801c1009c877f73d5eedd429 697 SMART SM00642 174 537 2.8E-6 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TF3313_0787 2accde4a801c1009c877f73d5eedd429 697 Gene3D G3DSA:2.60.40.10 47 155 5.3E-246 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_0998 7fd42dcc9f090a6d22bc5bf076ecd0e1 336 Pfam PF03102 NeuB family 24 268 6.0E-99 T 11-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 TF3313_0998 7fd42dcc9f090a6d22bc5bf076ecd0e1 336 SUPERFAMILY SSF51569 2 294 3.48E-85 T 11-10-2018 TF3313_0998 7fd42dcc9f090a6d22bc5bf076ecd0e1 336 Gene3D G3DSA:3.20.20.70 1 266 1.1E-102 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_0998 7fd42dcc9f090a6d22bc5bf076ecd0e1 336 Gene3D G3DSA:3.90.1210.10 269 336 6.4E-24 T 11-10-2018 TF3313_0998 7fd42dcc9f090a6d22bc5bf076ecd0e1 336 SUPERFAMILY SSF51269 274 335 1.44E-20 T 11-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 TF3313_0998 7fd42dcc9f090a6d22bc5bf076ecd0e1 336 SMART SM00858 282 336 4.8E-5 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 TF3313_0998 7fd42dcc9f090a6d22bc5bf076ecd0e1 336 Pfam PF08666 SAF domain 284 334 4.3E-9 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 TF3313_0998 7fd42dcc9f090a6d22bc5bf076ecd0e1 336 TIGRFAM TIGR03569 NeuB_NnaB: N-acetylneuraminate synthase 4 334 5.5E-152 T 11-10-2018 IPR020007 N-acetylneuraminate synthase KEGG: 00520+2.5.1.101|MetaCyc: PWY-6749|MetaCyc: PWY-7131 TF3313_0946 4006a2edf144b1adca7e082535e61f7c 384 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 52 158 8.2E-9 T 11-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain TF3313_0946 4006a2edf144b1adca7e082535e61f7c 384 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 23 5.2E-4 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal TF3313_0946 4006a2edf144b1adca7e082535e61f7c 384 SMART SM00922 177 269 2.7E-18 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal TF3313_0946 4006a2edf144b1adca7e082535e61f7c 384 SUPERFAMILY SSF51604 159 382 6.81E-48 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily TF3313_0946 4006a2edf144b1adca7e082535e61f7c 384 Gene3D G3DSA:3.30.390.10 43 151 1.7E-27 T 11-10-2018 IPR029017 Enolase-like, N-terminal TF3313_0946 4006a2edf144b1adca7e082535e61f7c 384 Gene3D G3DSA:3.20.20.120 152 380 3.2E-60 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily TF3313_0946 4006a2edf144b1adca7e082535e61f7c 384 Pfam PF13378 Enolase C-terminal domain-like 185 382 2.9E-31 T 11-10-2018 IPR029065 Enolase C-terminal domain-like TF3313_0946 4006a2edf144b1adca7e082535e61f7c 384 SUPERFAMILY SSF54826 44 159 3.05E-21 T 11-10-2018 TF3313_2676 e8ffe5b4fcec1be3f87ec22347339e80 1112 SMART SM00957 7 584 2.3E-238 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 TF3313_2676 e8ffe5b4fcec1be3f87ec22347339e80 1112 SUPERFAMILY SSF52540 6 597 1.46E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2676 e8ffe5b4fcec1be3f87ec22347339e80 1112 Pfam PF01043 SecA preprotein cross-linking domain 399 540 5.2E-37 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 TF3313_2676 e8ffe5b4fcec1be3f87ec22347339e80 1112 ProSitePatterns PS01312 SecA family signature. 682 697 - T 11-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 TF3313_2676 e8ffe5b4fcec1be3f87ec22347339e80 1112 Gene3D G3DSA:3.40.50.300 599 701 2.5E-42 T 11-10-2018 TF3313_2676 e8ffe5b4fcec1be3f87ec22347339e80 1112 Hamap MF_01382 Protein translocase subunit SecA [secA]. 6 1023 19.561 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TF3313_2676 e8ffe5b4fcec1be3f87ec22347339e80 1112 SMART SM00958 411 540 1.1E-36 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 TF3313_2676 e8ffe5b4fcec1be3f87ec22347339e80 1112 SUPERFAMILY SSF52540 599 770 1.05E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2676 e8ffe5b4fcec1be3f87ec22347339e80 1112 Pfam PF07516 SecA Wing and Scaffold domain 771 1019 5.5E-54 T 11-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 TF3313_2676 e8ffe5b4fcec1be3f87ec22347339e80 1112 Pfam PF07517 SecA DEAD-like domain 7 584 7.5E-122 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 TF3313_2676 e8ffe5b4fcec1be3f87ec22347339e80 1112 Gene3D G3DSA:3.10.450.50 1076 1111 5.0E-8 T 11-10-2018 TF3313_2676 e8ffe5b4fcec1be3f87ec22347339e80 1112 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 84 698 2.1E-193 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TF3313_2676 e8ffe5b4fcec1be3f87ec22347339e80 1112 Gene3D G3DSA:1.10.3060.10 927 1023 1.8E-20 T 11-10-2018 TF3313_2676 e8ffe5b4fcec1be3f87ec22347339e80 1112 Gene3D G3DSA:1.10.3060.10 774 914 1.1E-25 T 11-10-2018 TF3313_2676 e8ffe5b4fcec1be3f87ec22347339e80 1112 Gene3D G3DSA:3.40.50.300 702 773 1.1E-30 T 11-10-2018 TF3313_2676 e8ffe5b4fcec1be3f87ec22347339e80 1112 SUPERFAMILY SSF81767 409 548 2.62E-30 T 11-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 TF3313_2676 e8ffe5b4fcec1be3f87ec22347339e80 1112 PRINTS PR00906 SecA protein signature 106 130 1.3E-31 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TF3313_2676 e8ffe5b4fcec1be3f87ec22347339e80 1112 PRINTS PR00906 SecA protein signature 521 543 1.3E-31 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TF3313_2676 e8ffe5b4fcec1be3f87ec22347339e80 1112 PRINTS PR00906 SecA protein signature 558 575 1.3E-31 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TF3313_2676 e8ffe5b4fcec1be3f87ec22347339e80 1112 PRINTS PR00906 SecA protein signature 595 608 1.3E-31 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TF3313_2676 e8ffe5b4fcec1be3f87ec22347339e80 1112 Gene3D G3DSA:3.90.1440.10 439 550 5.3E-30 T 11-10-2018 TF3313_2676 e8ffe5b4fcec1be3f87ec22347339e80 1112 SUPERFAMILY SSF81886 773 1100 6.54E-59 T 11-10-2018 IPR036266 SecA, Wing/Scaffold superfamily TF3313_2676 e8ffe5b4fcec1be3f87ec22347339e80 1112 Pfam PF02810 SEC-C motif 1092 1110 5.2E-10 T 11-10-2018 IPR004027 SEC-C motif TF3313_1408 00919bfc1b7f6b1fabc47fc4bf64be49 129 SUPERFAMILY SSF50249 2 123 2.23E-52 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TF3313_1408 00919bfc1b7f6b1fabc47fc4bf64be49 129 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.602 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1408 00919bfc1b7f6b1fabc47fc4bf64be49 129 Gene3D G3DSA:2.40.50.140 1 129 4.0E-62 T 11-10-2018 TF3313_1408 00919bfc1b7f6b1fabc47fc4bf64be49 129 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 2.3E-67 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1408 00919bfc1b7f6b1fabc47fc4bf64be49 129 Pfam PF00164 Ribosomal protein S12/S23 12 123 8.6E-43 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1408 00919bfc1b7f6b1fabc47fc4bf64be49 129 PRINTS PR01034 Ribosomal protein S12 signature 77 94 1.4E-58 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1408 00919bfc1b7f6b1fabc47fc4bf64be49 129 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.4E-58 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1408 00919bfc1b7f6b1fabc47fc4bf64be49 129 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.4E-58 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1408 00919bfc1b7f6b1fabc47fc4bf64be49 129 PRINTS PR01034 Ribosomal protein S12 signature 58 77 1.4E-58 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1408 00919bfc1b7f6b1fabc47fc4bf64be49 129 PRINTS PR01034 Ribosomal protein S12 signature 110 122 1.4E-58 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1408 00919bfc1b7f6b1fabc47fc4bf64be49 129 PRINTS PR01034 Ribosomal protein S12 signature 94 110 1.4E-58 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1408 00919bfc1b7f6b1fabc47fc4bf64be49 129 PIRSF PIRSF002133 1 124 3.8E-54 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1408 00919bfc1b7f6b1fabc47fc4bf64be49 129 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1590 6770075f1f1c0d28bb24c92275eaeb59 325 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 6 317 6.5E-76 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 TF3313_1590 6770075f1f1c0d28bb24c92275eaeb59 325 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 6 320 32.994 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 TF3313_1590 6770075f1f1c0d28bb24c92275eaeb59 325 Gene3D G3DSA:3.40.50.170 1 216 2.2E-66 T 11-10-2018 TF3313_1590 6770075f1f1c0d28bb24c92275eaeb59 325 Gene3D G3DSA:3.10.25.10 218 323 5.4E-23 T 11-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TF3313_1590 6770075f1f1c0d28bb24c92275eaeb59 325 Pfam PF00551 Formyl transferase 7 184 1.0E-34 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TF3313_1590 6770075f1f1c0d28bb24c92275eaeb59 325 SUPERFAMILY SSF50486 217 319 4.87E-23 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 TF3313_1590 6770075f1f1c0d28bb24c92275eaeb59 325 SUPERFAMILY SSF53328 6 191 4.32E-57 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TF3313_1590 6770075f1f1c0d28bb24c92275eaeb59 325 Pfam PF02911 Formyl transferase, C-terminal domain 215 317 1.1E-23 T 11-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TF3313_1676 2e6560b872555a9a8f322e8544dcdc2f 256 SUPERFAMILY SSF64167 6 252 9.42E-67 T 11-10-2018 TF3313_1676 2e6560b872555a9a8f322e8544dcdc2f 256 Gene3D G3DSA:3.40.1210.10 1 255 2.1E-73 T 11-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 TF3313_1676 2e6560b872555a9a8f322e8544dcdc2f 256 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 7 241 4.2E-51 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 TF3313_1676 2e6560b872555a9a8f322e8544dcdc2f 256 Pfam PF01975 Survival protein SurE 7 189 5.2E-53 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 TF3313_1676 2e6560b872555a9a8f322e8544dcdc2f 256 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 5 256 28.825 T 11-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 TF3313_0639 61ddcdaab284b8b6ad9b820addd82331 507 SUPERFAMILY SSF47917 385 501 6.02E-51 T 11-10-2018 TF3313_0639 61ddcdaab284b8b6ad9b820addd82331 507 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 9 80 1.3E-13 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TF3313_0639 61ddcdaab284b8b6ad9b820addd82331 507 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 140 382 1.1E-57 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TF3313_0639 61ddcdaab284b8b6ad9b820addd82331 507 SMART SM00382 152 367 2.1E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_0639 61ddcdaab284b8b6ad9b820addd82331 507 Gene3D G3DSA:3.40.50.300 86 384 1.6E-106 T 11-10-2018 TF3313_0639 61ddcdaab284b8b6ad9b820addd82331 507 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 373 382 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TF3313_0639 61ddcdaab284b8b6ad9b820addd82331 507 Gene3D G3DSA:1.10.1140.10 385 504 4.4E-55 T 11-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TF3313_0639 61ddcdaab284b8b6ad9b820addd82331 507 Gene3D G3DSA:2.40.10.170 5 85 3.3E-23 T 11-10-2018 TF3313_0639 61ddcdaab284b8b6ad9b820addd82331 507 SUPERFAMILY SSF52540 87 387 3.75E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0639 61ddcdaab284b8b6ad9b820addd82331 507 Hamap MF_01347 ATP synthase subunit beta [atpB]. 4 500 55.02 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 TF3313_0639 61ddcdaab284b8b6ad9b820addd82331 507 SUPERFAMILY SSF50615 4 85 2.62E-18 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TF3313_0639 61ddcdaab284b8b6ad9b820addd82331 507 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 6 499 1.6E-227 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 TF3313_2076 7f821eedb603df4c81405663d6558e69 241 Pfam PF08241 Methyltransferase domain 39 153 7.7E-18 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 TF3313_2076 7f821eedb603df4c81405663d6558e69 241 SUPERFAMILY SSF53335 22 222 6.14E-24 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_2076 7f821eedb603df4c81405663d6558e69 241 Gene3D G3DSA:3.40.50.150 8 228 3.4E-26 T 11-10-2018 TF3313_1237 f1dc06e478ee5dd6ba2971b03331d9e7 224 SUPERFAMILY SSF56349 19 202 5.59E-39 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TF3313_1237 f1dc06e478ee5dd6ba2971b03331d9e7 224 Pfam PF00589 Phage integrase family 28 196 4.3E-31 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TF3313_1237 f1dc06e478ee5dd6ba2971b03331d9e7 224 Gene3D G3DSA:1.10.443.10 17 216 3.5E-38 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TF3313_1898 f1dc06e478ee5dd6ba2971b03331d9e7 224 SUPERFAMILY SSF56349 19 202 5.59E-39 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TF3313_1898 f1dc06e478ee5dd6ba2971b03331d9e7 224 Pfam PF00589 Phage integrase family 28 196 4.3E-31 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TF3313_1898 f1dc06e478ee5dd6ba2971b03331d9e7 224 Gene3D G3DSA:1.10.443.10 17 216 3.5E-38 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TF3313_2749 ebbd2d496e425829a80489da3abafd18 554 Pfam PF06826 Predicted Permease Membrane Region 377 549 1.8E-43 T 11-10-2018 IPR006512 YidE/YbjL duplication TF3313_2749 ebbd2d496e425829a80489da3abafd18 554 Pfam PF06826 Predicted Permease Membrane Region 20 181 4.7E-39 T 11-10-2018 IPR006512 YidE/YbjL duplication TF3313_2749 ebbd2d496e425829a80489da3abafd18 554 Pfam PF02080 TrkA-C domain 300 363 6.2E-12 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TF3313_2749 ebbd2d496e425829a80489da3abafd18 554 Pfam PF02080 TrkA-C domain 208 270 1.9E-8 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TF3313_2749 ebbd2d496e425829a80489da3abafd18 554 SUPERFAMILY SSF116726 284 365 3.14E-14 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TF3313_2749 ebbd2d496e425829a80489da3abafd18 554 SUPERFAMILY SSF116726 200 273 1.44E-8 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TF3313_2749 ebbd2d496e425829a80489da3abafd18 554 Gene3D G3DSA:3.30.70.1450 294 371 3.0E-11 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TF3313_2749 ebbd2d496e425829a80489da3abafd18 554 Gene3D G3DSA:3.30.70.1450 190 271 2.4E-9 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TF3313_2749 ebbd2d496e425829a80489da3abafd18 554 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 25 168 2.1E-34 T 11-10-2018 IPR006512 YidE/YbjL duplication TF3313_2749 ebbd2d496e425829a80489da3abafd18 554 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 382 536 9.4E-44 T 11-10-2018 IPR006512 YidE/YbjL duplication TF3313_1773 54f1f0286ea3dd5a7df1c996adc6e4ae 529 Gene3D G3DSA:3.40.50.620 19 378 1.5E-131 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_1773 54f1f0286ea3dd5a7df1c996adc6e4ae 529 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 28 523 8.6E-140 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TF3313_1773 54f1f0286ea3dd5a7df1c996adc6e4ae 529 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 366 9.2E-93 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 TF3313_1773 54f1f0286ea3dd5a7df1c996adc6e4ae 529 Gene3D G3DSA:1.10.10.350 433 529 3.2E-20 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TF3313_1773 54f1f0286ea3dd5a7df1c996adc6e4ae 529 SUPERFAMILY SSF48163 363 526 1.44E-40 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TF3313_1773 54f1f0286ea3dd5a7df1c996adc6e4ae 529 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 35 46 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_1773 54f1f0286ea3dd5a7df1c996adc6e4ae 529 Gene3D G3DSA:1.10.8.70 381 425 1.7E-5 T 11-10-2018 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 TF3313_1773 54f1f0286ea3dd5a7df1c996adc6e4ae 529 SUPERFAMILY SSF52374 28 361 1.8E-98 T 11-10-2018 TF3313_1773 54f1f0286ea3dd5a7df1c996adc6e4ae 529 PRINTS PR00987 Glutamyl-tRNA synthetase signature 61 74 4.0E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TF3313_1773 54f1f0286ea3dd5a7df1c996adc6e4ae 529 PRINTS PR00987 Glutamyl-tRNA synthetase signature 222 232 4.0E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TF3313_1773 54f1f0286ea3dd5a7df1c996adc6e4ae 529 PRINTS PR00987 Glutamyl-tRNA synthetase signature 238 246 4.0E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TF3313_1773 54f1f0286ea3dd5a7df1c996adc6e4ae 529 PRINTS PR00987 Glutamyl-tRNA synthetase signature 32 44 4.0E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TF3313_1773 54f1f0286ea3dd5a7df1c996adc6e4ae 529 PRINTS PR00987 Glutamyl-tRNA synthetase signature 46 57 4.0E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TF3313_1773 54f1f0286ea3dd5a7df1c996adc6e4ae 529 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 28 525 30.263 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TF3313_1019 4c3b48b014dcd652433640396206af9b 418 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 414 5.7E-179 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 TF3313_1019 4c3b48b014dcd652433640396206af9b 418 SUPERFAMILY SSF53901 4 252 5.76E-74 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TF3313_1019 4c3b48b014dcd652433640396206af9b 418 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 4.5E-54 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal TF3313_1019 4c3b48b014dcd652433640396206af9b 418 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site TF3313_1019 4c3b48b014dcd652433640396206af9b 418 SUPERFAMILY SSF53901 214 416 3.3E-69 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TF3313_1019 4c3b48b014dcd652433640396206af9b 418 SMART SM00825 Beta-ketoacyl synthase 6 418 1.6E-16 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain TF3313_1019 4c3b48b014dcd652433640396206af9b 418 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 368 1.1E-37 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal TF3313_1019 4c3b48b014dcd652433640396206af9b 418 Gene3D G3DSA:3.40.47.10 257 405 3.6E-49 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TF3313_1019 4c3b48b014dcd652433640396206af9b 418 PIRSF PIRSF000447 1 418 1.6E-165 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 TF3313_1019 4c3b48b014dcd652433640396206af9b 418 Gene3D G3DSA:3.40.47.10 1 255 2.4E-86 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TF3313_2078 bad03cd71eb3e89e9d73da136a3a3b05 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 13 363 4.1E-56 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 TF3313_1454 649f5234d23d25f9f7fe493dc18fd5c7 567 Gene3D G3DSA:3.20.20.80 213 431 1.7E-39 T 11-10-2018 TF3313_1454 649f5234d23d25f9f7fe493dc18fd5c7 567 Gene3D G3DSA:3.20.20.80 2 149 1.3E-23 T 11-10-2018 TF3313_1454 649f5234d23d25f9f7fe493dc18fd5c7 567 SMART SM00642 11 430 4.3E-7 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TF3313_1454 649f5234d23d25f9f7fe493dc18fd5c7 567 SUPERFAMILY SSF51011 477 561 1.24E-6 T 11-10-2018 TF3313_1454 649f5234d23d25f9f7fe493dc18fd5c7 567 Pfam PF00128 Alpha amylase, catalytic domain 46 397 4.5E-23 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TF3313_1454 649f5234d23d25f9f7fe493dc18fd5c7 567 SUPERFAMILY SSF51445 7 458 7.04E-78 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily TF3313_0600 27cea3bda0b20bf3efe10c96bbed45d5 361 SUPERFAMILY SSF55979 4 117 1.57E-12 T 11-10-2018 TF3313_0600 27cea3bda0b20bf3efe10c96bbed45d5 361 Gene3D G3DSA:3.10.150.10 4 239 7.1E-63 T 11-10-2018 TF3313_0600 27cea3bda0b20bf3efe10c96bbed45d5 361 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 243 357 3.2E-4 T 11-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 TF3313_0600 27cea3bda0b20bf3efe10c96bbed45d5 361 SUPERFAMILY SSF55979 247 357 1.2E-9 T 11-10-2018 TF3313_0600 27cea3bda0b20bf3efe10c96bbed45d5 361 Pfam PF02767 DNA polymerase III beta subunit, central domain 134 240 1.9E-9 T 11-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 TF3313_0600 27cea3bda0b20bf3efe10c96bbed45d5 361 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 5 116 1.4E-11 T 11-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 TF3313_0600 27cea3bda0b20bf3efe10c96bbed45d5 361 SMART SM00480 18 355 7.2E-11 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 TF3313_0600 27cea3bda0b20bf3efe10c96bbed45d5 361 SUPERFAMILY SSF55979 131 241 2.93E-13 T 11-10-2018 TF3313_0600 27cea3bda0b20bf3efe10c96bbed45d5 361 Gene3D G3DSA:3.70.10.10 137 357 7.1E-63 T 11-10-2018 TF3313_1499 da9f51b7e2a2ee96aae6cea0442407ea 239 SUPERFAMILY SSF46548 123 231 8.89E-19 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TF3313_1499 da9f51b7e2a2ee96aae6cea0442407ea 239 SUPERFAMILY SSF54292 4 120 4.85E-20 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 TF3313_1499 da9f51b7e2a2ee96aae6cea0442407ea 239 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 8 124 2.9E-22 T 11-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 TF3313_1499 da9f51b7e2a2ee96aae6cea0442407ea 239 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 62 70 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 TF3313_1499 da9f51b7e2a2ee96aae6cea0442407ea 239 Gene3D G3DSA:1.10.1060.10 122 237 5.2E-8 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TF3313_1499 da9f51b7e2a2ee96aae6cea0442407ea 239 Gene3D G3DSA:3.10.20.30 1 120 8.3E-25 T 11-10-2018 IPR012675 Beta-grasp domain superfamily TF3313_1499 da9f51b7e2a2ee96aae6cea0442407ea 239 Pfam PF13183 4Fe-4S dicluster domain 160 231 6.9E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TF3313_1046 0a115134d0afad478249bcd3887a2410 551 Gene3D G3DSA:3.30.870.10 434 513 1.9E-12 T 11-10-2018 TF3313_1046 0a115134d0afad478249bcd3887a2410 551 SUPERFAMILY SSF56024 167 306 2.98E-13 T 11-10-2018 TF3313_1046 0a115134d0afad478249bcd3887a2410 551 Pfam PF13091 PLD-like domain 182 303 4.2E-10 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 TF3313_1046 0a115134d0afad478249bcd3887a2410 551 Pfam PF13091 PLD-like domain 445 489 4.7E-8 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 TF3313_1046 0a115134d0afad478249bcd3887a2410 551 Gene3D G3DSA:3.30.870.10 123 307 2.2E-19 T 11-10-2018 TF3313_1046 0a115134d0afad478249bcd3887a2410 551 SUPERFAMILY SSF56024 414 505 1.79E-10 T 11-10-2018 TF3313_0996 002bac169983085f54eda2177fb9f776 348 SUPERFAMILY SSF54631 6 107 3.54E-15 T 11-10-2018 TF3313_0996 002bac169983085f54eda2177fb9f776 348 Gene3D G3DSA:3.10.580.10 3 117 4.6E-14 T 11-10-2018 TF3313_0996 002bac169983085f54eda2177fb9f776 348 Gene3D G3DSA:3.90.550.10 120 346 1.4E-62 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_0996 002bac169983085f54eda2177fb9f776 348 Pfam PF00571 CBS domain 8 54 0.0019 T 11-10-2018 IPR000644 CBS domain TF3313_0996 002bac169983085f54eda2177fb9f776 348 SUPERFAMILY SSF53448 119 342 2.71E-60 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_0996 002bac169983085f54eda2177fb9f776 348 Pfam PF00483 Nucleotidyl transferase 122 340 2.5E-36 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 TF3313_2412 1f6693c18e29ca2e7c1f1b5a4df518c7 318 Pfam PF03116 NQR2, RnfD, RnfE family 7 316 7.2E-112 T 11-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 TF3313_2412 1f6693c18e29ca2e7c1f1b5a4df518c7 318 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 5 318 25.223 T 11-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 TF3313_2412 1f6693c18e29ca2e7c1f1b5a4df518c7 318 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 10 316 1.1E-113 T 11-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 TF3313_0928 38803efd59b7731e3947d2177a9b4cfe 323 Gene3D G3DSA:3.30.420.40 7 315 2.4E-90 T 11-10-2018 TF3313_0928 38803efd59b7731e3947d2177a9b4cfe 323 ProSitePatterns PS01125 ROK family signature. 139 166 - T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 TF3313_0928 38803efd59b7731e3947d2177a9b4cfe 323 Pfam PF00480 ROK family 7 315 8.0E-62 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 TF3313_0928 38803efd59b7731e3947d2177a9b4cfe 323 SUPERFAMILY SSF53067 5 318 3.27E-61 T 11-10-2018 TF3313_0928 38803efd59b7731e3947d2177a9b4cfe 323 Gene3D G3DSA:3.30.420.40 130 301 2.4E-90 T 11-10-2018 TF3313_1310 1c7f8e70de3b65b0832b49d9456e9d80 187 Gene3D G3DSA:2.30.30.30 1 63 2.9E-23 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 TF3313_1310 1c7f8e70de3b65b0832b49d9456e9d80 187 TIGRFAM TIGR00038 efp: translation elongation factor P 2 186 1.8E-65 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 TF3313_1310 1c7f8e70de3b65b0832b49d9456e9d80 187 SMART SM00841 130 185 2.2E-30 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 TF3313_1310 1c7f8e70de3b65b0832b49d9456e9d80 187 Pfam PF09285 Elongation factor P, C-terminal 130 185 9.0E-26 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 TF3313_1310 1c7f8e70de3b65b0832b49d9456e9d80 187 PIRSF PIRSF005901 1 187 1.1E-59 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP TF3313_1310 1c7f8e70de3b65b0832b49d9456e9d80 187 Gene3D G3DSA:2.40.50.140 64 130 1.1E-16 T 11-10-2018 TF3313_1310 1c7f8e70de3b65b0832b49d9456e9d80 187 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 114 2.4E-16 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 TF3313_1310 1c7f8e70de3b65b0832b49d9456e9d80 187 SUPERFAMILY SSF50104 1 63 1.81E-17 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily TF3313_1310 1c7f8e70de3b65b0832b49d9456e9d80 187 SUPERFAMILY SSF50249 130 186 1.1E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TF3313_1310 1c7f8e70de3b65b0832b49d9456e9d80 187 SUPERFAMILY SSF50249 65 114 1.16E-12 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TF3313_1310 1c7f8e70de3b65b0832b49d9456e9d80 187 SMART SM01185 67 122 5.8E-19 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 TF3313_1310 1c7f8e70de3b65b0832b49d9456e9d80 187 ProSitePatterns PS01275 Elongation factor P signature. 151 170 - T 11-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site TF3313_1310 1c7f8e70de3b65b0832b49d9456e9d80 187 Hamap MF_00141 Elongation factor P [efp]. 1 186 43.768 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 TF3313_1310 1c7f8e70de3b65b0832b49d9456e9d80 187 Gene3D G3DSA:2.40.50.140 131 187 2.1E-26 T 11-10-2018 TF3313_1310 1c7f8e70de3b65b0832b49d9456e9d80 187 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 60 4.6E-22 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like TF3313_1333 b9e26a6bc4c9c8aab9ad6cff0867084a 513 Pfam PF07980 SusD family 277 513 3.0E-48 T 11-10-2018 IPR012944 RagB/SusD domain TF3313_1333 b9e26a6bc4c9c8aab9ad6cff0867084a 513 Pfam PF14322 Starch-binding associating with outer membrane 40 219 5.8E-22 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_1333 b9e26a6bc4c9c8aab9ad6cff0867084a 513 SUPERFAMILY SSF48452 16 513 1.05E-116 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1333 b9e26a6bc4c9c8aab9ad6cff0867084a 513 Gene3D G3DSA:1.25.40.390 18 505 5.1E-119 T 11-10-2018 TF3313_1119 652eaeddffd0ba559e734acff1b0ecb9 1005 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 196 226 4.7E-16 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_1119 652eaeddffd0ba559e734acff1b0ecb9 1005 Pfam PF13715 CarboxypepD_reg-like domain 26 108 5.1E-19 T 11-10-2018 TF3313_1119 652eaeddffd0ba559e734acff1b0ecb9 1005 Pfam PF07715 TonB-dependent Receptor Plug Domain 115 220 2.9E-18 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_1119 652eaeddffd0ba559e734acff1b0ecb9 1005 Gene3D G3DSA:2.60.40.1120 25 95 6.7E-7 T 11-10-2018 TF3313_1119 652eaeddffd0ba559e734acff1b0ecb9 1005 SUPERFAMILY SSF49464 24 106 1.83E-20 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_1119 652eaeddffd0ba559e734acff1b0ecb9 1005 SUPERFAMILY SSF56935 104 1005 3.66E-80 T 11-10-2018 TF3313_1119 652eaeddffd0ba559e734acff1b0ecb9 1005 Gene3D G3DSA:2.170.130.10 96 225 1.8E-27 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_1119 652eaeddffd0ba559e734acff1b0ecb9 1005 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 24 1005 1.6E-249 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_1913 e94660a0f0f266ab6c43481083daf8aa 846 PRINTS PR01183 Ribonucleotide reductase large chain signature 587 610 5.5E-45 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TF3313_1913 e94660a0f0f266ab6c43481083daf8aa 846 PRINTS PR01183 Ribonucleotide reductase large chain signature 715 742 5.5E-45 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TF3313_1913 e94660a0f0f266ab6c43481083daf8aa 846 PRINTS PR01183 Ribonucleotide reductase large chain signature 529 540 5.5E-45 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TF3313_1913 e94660a0f0f266ab6c43481083daf8aa 846 PRINTS PR01183 Ribonucleotide reductase large chain signature 625 647 5.5E-45 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TF3313_1913 e94660a0f0f266ab6c43481083daf8aa 846 PRINTS PR01183 Ribonucleotide reductase large chain signature 653 676 5.5E-45 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TF3313_1913 e94660a0f0f266ab6c43481083daf8aa 846 PRINTS PR01183 Ribonucleotide reductase large chain signature 391 410 5.5E-45 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TF3313_1913 e94660a0f0f266ab6c43481083daf8aa 846 SUPERFAMILY SSF48168 105 314 1.83E-53 T 11-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TF3313_1913 e94660a0f0f266ab6c43481083daf8aa 846 SUPERFAMILY SSF51998 315 845 2.17E-166 T 11-10-2018 TF3313_1913 e94660a0f0f266ab6c43481083daf8aa 846 Gene3D G3DSA:3.20.70.20 189 840 3.7E-201 T 11-10-2018 TF3313_1913 e94660a0f0f266ab6c43481083daf8aa 846 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 237 312 6.0E-17 T 11-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TF3313_1913 e94660a0f0f266ab6c43481083daf8aa 846 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 240 834 1.5E-185 T 11-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TF3313_1913 e94660a0f0f266ab6c43481083daf8aa 846 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 704 726 - T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TF3313_1913 e94660a0f0f266ab6c43481083daf8aa 846 Pfam PF03477 ATP cone domain 5 94 9.2E-19 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 TF3313_1913 e94660a0f0f266ab6c43481083daf8aa 846 Pfam PF02867 Ribonucleotide reductase, barrel domain 316 830 1.8E-150 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TF3313_1290 30cc28db8a3b0ec6405aba90f0885bf5 229 Pfam PF16404 Domain of unknown function (DUF5012) 105 228 1.5E-63 T 11-10-2018 IPR032180 Domain of unknown function DUF5012 TF3313_1290 30cc28db8a3b0ec6405aba90f0885bf5 229 Gene3D G3DSA:2.60.40.10 34 105 2.1E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_1290 30cc28db8a3b0ec6405aba90f0885bf5 229 Pfam PF16403 Domain of unknown function (DUF5011) 34 103 3.1E-18 T 11-10-2018 IPR032179 Domain of unknown function DUF5011 TF3313_2180 42d83126328f3350c8bb2a30d6f0c59c 881 SUPERFAMILY SSF51445 221 867 1.9E-124 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily TF3313_2180 42d83126328f3350c8bb2a30d6f0c59c 881 Gene3D G3DSA:2.60.40.10 113 209 1.9E-11 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_2180 42d83126328f3350c8bb2a30d6f0c59c 881 Pfam PF02446 4-alpha-glucanotransferase 228 852 4.7E-150 T 11-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 TF3313_2180 42d83126328f3350c8bb2a30d6f0c59c 881 Gene3D G3DSA:2.60.40.10 1 83 1.3E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_2180 42d83126328f3350c8bb2a30d6f0c59c 881 SUPERFAMILY SSF49452 2 76 6.13E-8 T 11-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 TF3313_2180 42d83126328f3350c8bb2a30d6f0c59c 881 Gene3D G3DSA:3.20.20.80 649 877 7.9E-41 T 11-10-2018 TF3313_2180 42d83126328f3350c8bb2a30d6f0c59c 881 SUPERFAMILY SSF49452 118 208 2.94E-15 T 11-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 TF3313_2180 42d83126328f3350c8bb2a30d6f0c59c 881 Gene3D G3DSA:3.20.20.80 220 551 2.5E-100 T 11-10-2018 TF3313_2180 42d83126328f3350c8bb2a30d6f0c59c 881 Pfam PF00686 Starch binding domain 120 198 2.9E-11 T 11-10-2018 IPR002044 Carbohydrate binding module family 20 GO:2001070 TF3313_2180 42d83126328f3350c8bb2a30d6f0c59c 881 SMART SM01065 113 204 2.4E-10 T 11-10-2018 IPR002044 Carbohydrate binding module family 20 GO:2001070 TF3313_1523 ba12c098d2b09b7d73d7c51cd529335c 127 SUPERFAMILY SSF55961 16 125 5.5E-12 T 11-10-2018 TF3313_1523 ba12c098d2b09b7d73d7c51cd529335c 127 Gene3D G3DSA:3.30.530.20 1 127 7.1E-43 T 11-10-2018 IPR023393 START-like domain superfamily TF3313_1769 dcfb905d8fc59f0c84c19535963205e1 194 SUPERFAMILY SSF46609 1 84 3.14E-28 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TF3313_1769 dcfb905d8fc59f0c84c19535963205e1 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 81 3.0E-26 T 11-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TF3313_1769 dcfb905d8fc59f0c84c19535963205e1 194 Gene3D G3DSA:2.40.500.20 83 194 4.2E-44 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TF3313_1769 dcfb905d8fc59f0c84c19535963205e1 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 91 192 1.3E-39 T 11-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TF3313_1769 dcfb905d8fc59f0c84c19535963205e1 194 SUPERFAMILY SSF54719 88 193 1.57E-42 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TF3313_1769 dcfb905d8fc59f0c84c19535963205e1 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 159 166 - T 11-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TF3313_1769 dcfb905d8fc59f0c84c19535963205e1 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 4.0E-19 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TF3313_1769 dcfb905d8fc59f0c84c19535963205e1 194 PRINTS PR01703 Manganese superoxide dismutase signature 157 169 4.0E-19 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TF3313_1769 dcfb905d8fc59f0c84c19535963205e1 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 4.0E-19 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TF3313_1769 dcfb905d8fc59f0c84c19535963205e1 194 PRINTS PR01703 Manganese superoxide dismutase signature 66 79 4.0E-19 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TF3313_1769 dcfb905d8fc59f0c84c19535963205e1 194 PRINTS PR01703 Manganese superoxide dismutase signature 120 128 4.0E-19 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TF3313_1769 dcfb905d8fc59f0c84c19535963205e1 194 Gene3D G3DSA:1.10.287.990 20 81 1.1E-18 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TF3313_1769 dcfb905d8fc59f0c84c19535963205e1 194 PIRSF PIRSF000349 1 194 1.3E-75 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TF3313_2614 6974e264564baff45267ec773a6cea25 441 Gene3D G3DSA:3.40.50.150 53 433 6.1E-105 T 11-10-2018 TF3313_2614 6974e264564baff45267ec773a6cea25 441 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 370 401 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site TF3313_2614 6974e264564baff45267ec773a6cea25 441 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 2 431 4.6E-102 T 11-10-2018 TF3313_2614 6974e264564baff45267ec773a6cea25 441 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 421 431 - T 11-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site TF3313_2614 6974e264564baff45267ec773a6cea25 441 Gene3D G3DSA:2.40.50.140 1 51 2.4E-13 T 11-10-2018 TF3313_2614 6974e264564baff45267ec773a6cea25 441 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 193 439 6.3E-20 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 TF3313_2614 6974e264564baff45267ec773a6cea25 441 SUPERFAMILY SSF53335 40 438 2.57E-75 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_2614 6974e264564baff45267ec773a6cea25 441 Gene3D G3DSA:3.40.1350.30 100 270 6.1E-105 T 11-10-2018 TF3313_2456 634801b5e1db5f0106b88be16a32c653 61 Gene3D G3DSA:3.55.50.30 1 61 2.0E-5 T 11-10-2018 TF3313_2456 634801b5e1db5f0106b88be16a32c653 61 Pfam PF16344 Domain of unknown function (DUF4974) 1 53 7.6E-9 T 11-10-2018 IPR032508 Protein FecR, C-terminal TF3313_0455 8d8db091a735ba6580241691af3b2a58 537 Pfam PF14322 Starch-binding associating with outer membrane 102 256 5.0E-16 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_0455 8d8db091a735ba6580241691af3b2a58 537 SUPERFAMILY SSF48452 17 537 2.09E-58 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0455 8d8db091a735ba6580241691af3b2a58 537 Gene3D G3DSA:1.25.40.390 65 533 4.8E-69 T 11-10-2018 TF3313_0455 8d8db091a735ba6580241691af3b2a58 537 Pfam PF07980 SusD family 333 523 1.0E-13 T 11-10-2018 IPR012944 RagB/SusD domain TF3313_2514 df51e7d2e56615d1edf8fb6bd6eaf020 206 Pfam PF02527 rRNA small subunit methyltransferase G 17 176 4.2E-37 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 TF3313_2514 df51e7d2e56615d1edf8fb6bd6eaf020 206 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 8 204 23.624 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 TF3313_2514 df51e7d2e56615d1edf8fb6bd6eaf020 206 SUPERFAMILY SSF53335 4 166 4.26E-32 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_2514 df51e7d2e56615d1edf8fb6bd6eaf020 206 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 24 204 2.2E-37 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 TF3313_2514 df51e7d2e56615d1edf8fb6bd6eaf020 206 PIRSF PIRSF003078 1 206 3.7E-54 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 TF3313_2514 df51e7d2e56615d1edf8fb6bd6eaf020 206 Gene3D G3DSA:3.40.50.150 2 204 2.8E-52 T 11-10-2018 TF3313_0217 026e8366cc3dd9fad1929289a8011207 1115 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 42 1048 25.624 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 TF3313_0217 026e8366cc3dd9fad1929289a8011207 1115 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 241 1040 1.0E-267 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 TF3313_0217 026e8366cc3dd9fad1929289a8011207 1115 SMART SM01058 429 526 1.3E-38 T 11-10-2018 IPR003711 CarD-like/TRCF domain TF3313_0217 026e8366cc3dd9fad1929289a8011207 1115 Gene3D G3DSA:3.40.50.300 492 731 1.3E-223 T 11-10-2018 TF3313_0217 026e8366cc3dd9fad1929289a8011207 1115 SMART SM00487 550 740 1.2E-29 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TF3313_0217 026e8366cc3dd9fad1929289a8011207 1115 Pfam PF02559 CarD-like/TRCF domain 430 525 1.2E-24 T 11-10-2018 IPR003711 CarD-like/TRCF domain TF3313_0217 026e8366cc3dd9fad1929289a8011207 1115 Pfam PF00270 DEAD/DEAH box helicase 575 714 2.6E-14 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TF3313_0217 026e8366cc3dd9fad1929289a8011207 1115 Pfam PF03461 TRCF domain 970 1060 8.6E-22 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 TF3313_0217 026e8366cc3dd9fad1929289a8011207 1115 Gene3D G3DSA:3.40.50.300 429 940 1.3E-223 T 11-10-2018 TF3313_0217 026e8366cc3dd9fad1929289a8011207 1115 Gene3D G3DSA:2.30.30.840 433 491 1.3E-223 T 11-10-2018 TF3313_0217 026e8366cc3dd9fad1929289a8011207 1115 SUPERFAMILY SSF141259 424 498 2.62E-19 T 11-10-2018 IPR036101 CarD-like/TRCF domain superfamily TF3313_0217 026e8366cc3dd9fad1929289a8011207 1115 SUPERFAMILY SSF52540 27 311 1.04E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0217 026e8366cc3dd9fad1929289a8011207 1115 SMART SM00490 776 860 4.1E-18 T 11-10-2018 IPR001650 Helicase, C-terminal TF3313_0217 026e8366cc3dd9fad1929289a8011207 1115 SUPERFAMILY SSF52540 732 940 2.17E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0217 026e8366cc3dd9fad1929289a8011207 1115 SUPERFAMILY SSF52540 488 734 4.77E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0217 026e8366cc3dd9fad1929289a8011207 1115 Pfam PF00271 Helicase conserved C-terminal domain 758 860 3.2E-18 T 11-10-2018 IPR001650 Helicase, C-terminal TF3313_0217 026e8366cc3dd9fad1929289a8011207 1115 SUPERFAMILY SSF143517 958 1097 1.44E-26 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain TF3313_0217 026e8366cc3dd9fad1929289a8011207 1115 Gene3D G3DSA:3.30.2060.10 144 229 4.5E-26 T 11-10-2018 TF3313_0217 026e8366cc3dd9fad1929289a8011207 1115 SUPERFAMILY SSF52540 319 414 5.26E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0217 026e8366cc3dd9fad1929289a8011207 1115 SMART SM00982 967 1067 2.5E-19 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 TF3313_0217 026e8366cc3dd9fad1929289a8011207 1115 Gene3D G3DSA:3.90.1150.50 963 1112 9.7E-26 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain TF3313_0885 49a58880cc9b4d1cb74c8d1840dbfb22 329 SUPERFAMILY SSF53335 63 240 2.79E-23 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_0885 49a58880cc9b4d1cb74c8d1840dbfb22 329 Gene3D G3DSA:3.40.50.150 75 239 2.8E-23 T 11-10-2018 TF3313_0885 49a58880cc9b4d1cb74c8d1840dbfb22 329 Pfam PF13847 Methyltransferase domain 87 201 3.5E-14 T 11-10-2018 IPR025714 Methyltransferase domain TF3313_1259 55e34fd9374d79de6f259ff1cce9aa5a 323 SUPERFAMILY SSF54106 278 320 6.93E-6 T 11-10-2018 TF3313_1259 55e34fd9374d79de6f259ff1cce9aa5a 323 SMART SM00047 24 171 2.7E-32 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 TF3313_1259 55e34fd9374d79de6f259ff1cce9aa5a 323 Gene3D G3DSA:3.10.350.10 223 275 8.4E-8 T 11-10-2018 IPR036779 LysM domain superfamily TF3313_1259 55e34fd9374d79de6f259ff1cce9aa5a 323 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 40 166 2.3E-23 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 TF3313_1259 55e34fd9374d79de6f259ff1cce9aa5a 323 Gene3D G3DSA:3.10.350.10 276 311 8.4E-8 T 11-10-2018 IPR036779 LysM domain superfamily TF3313_1259 55e34fd9374d79de6f259ff1cce9aa5a 323 Pfam PF01476 LysM domain 280 322 6.7E-4 T 11-10-2018 IPR018392 LysM domain TF3313_1259 55e34fd9374d79de6f259ff1cce9aa5a 323 Gene3D G3DSA:1.10.530.10 24 168 1.4E-44 T 11-10-2018 TF3313_2462 0f66e0ab421e70540742f7221498ac9b 486 Pfam PF16370 C terminal of Calcineurin-like phosphoesterase 330 476 1.4E-49 T 11-10-2018 IPR032288 Calcineurin-like phosphoesterase, C-terminal TF3313_2462 0f66e0ab421e70540742f7221498ac9b 486 Pfam PF16371 N terminal of Calcineurin-like phosphoesterase 31 107 1.2E-25 T 11-10-2018 IPR032285 Calcineurin-like phosphoesterase, N-terminal TF3313_2462 0f66e0ab421e70540742f7221498ac9b 486 Gene3D G3DSA:3.60.21.10 97 372 7.7E-15 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like TF3313_2462 0f66e0ab421e70540742f7221498ac9b 486 Pfam PF00149 Calcineurin-like phosphoesterase 122 318 2.1E-7 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TF3313_2462 0f66e0ab421e70540742f7221498ac9b 486 SUPERFAMILY SSF56300 119 371 2.81E-31 T 11-10-2018 TF3313_1655 77c4ceff96583af52810a6757a673404 392 SUPERFAMILY SSF56281 3 284 2.24E-49 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TF3313_1655 77c4ceff96583af52810a6757a673404 392 Pfam PF00753 Metallo-beta-lactamase superfamily 30 174 6.2E-9 T 11-10-2018 IPR001279 Metallo-beta-lactamase TF3313_1655 77c4ceff96583af52810a6757a673404 392 SMART SM00849 32 222 4.2E-21 T 11-10-2018 IPR001279 Metallo-beta-lactamase TF3313_1655 77c4ceff96583af52810a6757a673404 392 PIRSF PIRSF005243 1 392 2.7E-125 T 11-10-2018 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 TF3313_1655 77c4ceff96583af52810a6757a673404 392 Pfam PF00258 Flavodoxin 251 344 5.9E-9 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 TF3313_1655 77c4ceff96583af52810a6757a673404 392 Gene3D G3DSA:3.60.15.10 1 242 6.9E-87 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TF3313_1655 77c4ceff96583af52810a6757a673404 392 Gene3D G3DSA:3.40.50.360 248 392 9.6E-32 T 11-10-2018 IPR029039 Flavoprotein-like superfamily TF3313_1655 77c4ceff96583af52810a6757a673404 392 SUPERFAMILY SSF52218 249 388 9.94E-29 T 11-10-2018 IPR029039 Flavoprotein-like superfamily TF3313_1655 77c4ceff96583af52810a6757a673404 392 ProSitePatterns PS00201 Flavodoxin signature. 251 267 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 TF3313_2074 bc9b4c6b2cda5ee53fa138d5882f013b 1014 Gene3D G3DSA:2.40.170.20 406 1014 5.0E-20 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_2074 bc9b4c6b2cda5ee53fa138d5882f013b 1014 Gene3D G3DSA:2.170.130.10 100 240 2.2E-31 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_2074 bc9b4c6b2cda5ee53fa138d5882f013b 1014 Gene3D G3DSA:2.60.40.1120 32 99 1.1E-5 T 11-10-2018 TF3313_2074 bc9b4c6b2cda5ee53fa138d5882f013b 1014 Pfam PF07715 TonB-dependent Receptor Plug Domain 120 235 2.0E-21 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_2074 bc9b4c6b2cda5ee53fa138d5882f013b 1014 SUPERFAMILY SSF56935 108 1014 4.88E-89 T 11-10-2018 TF3313_2074 bc9b4c6b2cda5ee53fa138d5882f013b 1014 Pfam PF00593 TonB dependent receptor 409 1005 1.0E-32 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_2074 bc9b4c6b2cda5ee53fa138d5882f013b 1014 Pfam PF13715 CarboxypepD_reg-like domain 33 112 8.1E-18 T 11-10-2018 TF3313_2074 bc9b4c6b2cda5ee53fa138d5882f013b 1014 SUPERFAMILY SSF49464 31 110 1.7E-16 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_2074 bc9b4c6b2cda5ee53fa138d5882f013b 1014 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 211 241 1.4E-18 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_2074 bc9b4c6b2cda5ee53fa138d5882f013b 1014 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 31 1014 8.1E-247 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_1194 bdf2e6922f25910c4d9d74205876a6b9 469 Pfam PF00717 Peptidase S24-like 89 170 1.8E-5 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C TF3313_1194 bdf2e6922f25910c4d9d74205876a6b9 469 ProSitePatterns PS00761 Signal peptidases I signature 3. 411 424 - T 11-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 TF3313_1194 bdf2e6922f25910c4d9d74205876a6b9 469 Gene3D G3DSA:2.10.109.10 343 462 7.9E-18 T 11-10-2018 TF3313_1194 bdf2e6922f25910c4d9d74205876a6b9 469 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 68 280 1.6E-21 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TF3313_1194 bdf2e6922f25910c4d9d74205876a6b9 469 SUPERFAMILY SSF51306 82 252 5.02E-27 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily TF3313_1194 bdf2e6922f25910c4d9d74205876a6b9 469 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 83 99 1.8E-8 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TF3313_1194 bdf2e6922f25910c4d9d74205876a6b9 469 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 406 425 1.8E-8 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TF3313_1194 bdf2e6922f25910c4d9d74205876a6b9 469 SUPERFAMILY SSF51306 386 465 4.34E-25 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily TF3313_1423 86e023c11b0a252919589f1c2e792f45 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 4 98 18.89 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1423 86e023c11b0a252919589f1c2e792f45 105 SMART SM00739 5 32 1.1E-4 T 11-10-2018 IPR005824 KOW TF3313_1423 86e023c11b0a252919589f1c2e792f45 105 Gene3D G3DSA:2.30.30.30 1 103 6.6E-36 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 TF3313_1423 86e023c11b0a252919589f1c2e792f45 105 SUPERFAMILY SSF50104 2 102 1.2E-33 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily TF3313_1423 86e023c11b0a252919589f1c2e792f45 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 41 104 1.1E-24 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1423 86e023c11b0a252919589f1c2e792f45 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 4 104 2.6E-31 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_0097 83c80d812964e8447c5b1a35d2d842aa 565 SMART SM00382 355 541 7.6E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_0097 83c80d812964e8447c5b1a35d2d842aa 565 Gene3D G3DSA:1.20.1560.10 2 317 1.9E-42 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TF3313_0097 83c80d812964e8447c5b1a35d2d842aa 565 Pfam PF00664 ABC transporter transmembrane region 17 276 1.7E-21 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TF3313_0097 83c80d812964e8447c5b1a35d2d842aa 565 SUPERFAMILY SSF52540 323 565 1.33E-83 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0097 83c80d812964e8447c5b1a35d2d842aa 565 SUPERFAMILY SSF90123 14 314 2.35E-48 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TF3313_0097 83c80d812964e8447c5b1a35d2d842aa 565 Pfam PF00005 ABC transporter 347 495 1.6E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TF3313_0097 83c80d812964e8447c5b1a35d2d842aa 565 Gene3D G3DSA:3.40.50.300 323 565 5.9E-77 T 11-10-2018 TF3313_0097 83c80d812964e8447c5b1a35d2d842aa 565 ProSitePatterns PS00211 ABC transporters family signature. 467 481 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TF3313_0977 33e5324fadd2f2273eeb625f40376183 239 SUPERFAMILY SSF53335 14 238 2.07E-23 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_0977 33e5324fadd2f2273eeb625f40376183 239 Pfam PF13489 Methyltransferase domain 29 181 2.9E-10 T 11-10-2018 TF3313_0977 33e5324fadd2f2273eeb625f40376183 239 Gene3D G3DSA:3.40.50.150 23 224 9.0E-18 T 11-10-2018 TF3313_2275 b412cca46408e7afb6427e0ab7b0ba70 732 Gene3D G3DSA:2.40.170.20 167 732 3.1E-49 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_2275 b412cca46408e7afb6427e0ab7b0ba70 732 Pfam PF00593 TonB dependent receptor 234 730 4.3E-22 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_2275 b412cca46408e7afb6427e0ab7b0ba70 732 Gene3D G3DSA:2.170.130.10 47 164 4.0E-16 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_2275 b412cca46408e7afb6427e0ab7b0ba70 732 SUPERFAMILY SSF56935 34 732 2.05E-73 T 11-10-2018 TF3313_2275 b412cca46408e7afb6427e0ab7b0ba70 732 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 152 2.2E-13 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_2625 a0cf6dce44d6f6508890976ed4d4c71e 1038 Gene3D G3DSA:2.60.40.1120 41 110 6.4E-7 T 11-10-2018 TF3313_2625 a0cf6dce44d6f6508890976ed4d4c71e 1038 SUPERFAMILY SSF49464 40 120 2.22E-17 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_2625 a0cf6dce44d6f6508890976ed4d4c71e 1038 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 214 243 8.0E-16 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_2625 a0cf6dce44d6f6508890976ed4d4c71e 1038 Pfam PF13715 CarboxypepD_reg-like domain 41 122 1.3E-18 T 11-10-2018 TF3313_2625 a0cf6dce44d6f6508890976ed4d4c71e 1038 Gene3D G3DSA:2.170.130.10 111 242 2.4E-30 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_2625 a0cf6dce44d6f6508890976ed4d4c71e 1038 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 41 1038 2.1E-264 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_2625 a0cf6dce44d6f6508890976ed4d4c71e 1038 Pfam PF07715 TonB-dependent Receptor Plug Domain 130 237 9.2E-22 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_2625 a0cf6dce44d6f6508890976ed4d4c71e 1038 Pfam PF00593 TonB dependent receptor 418 1035 2.2E-27 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_2625 a0cf6dce44d6f6508890976ed4d4c71e 1038 SUPERFAMILY SSF56935 118 1038 3.21E-87 T 11-10-2018 TF3313_2547 0ee27b9f03291c34fd175df073a0c2d4 294 Gene3D G3DSA:3.40.50.1820 59 294 4.4E-50 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TF3313_2547 0ee27b9f03291c34fd175df073a0c2d4 294 Pfam PF07859 alpha/beta hydrolase fold 86 203 1.9E-10 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 TF3313_2547 0ee27b9f03291c34fd175df073a0c2d4 294 SUPERFAMILY SSF53474 65 288 1.5E-30 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TF3313_2898 01703c9b1170d457383dd360217b0e73 603 Gene3D G3DSA:3.20.20.80 318 598 8.4E-48 T 11-10-2018 TF3313_2898 01703c9b1170d457383dd360217b0e73 603 Pfam PF00703 Glycosyl hydrolases family 2 255 306 4.3E-9 T 11-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 TF3313_2898 01703c9b1170d457383dd360217b0e73 603 SUPERFAMILY SSF49785 41 209 1.56E-49 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_2898 01703c9b1170d457383dd360217b0e73 603 SUPERFAMILY SSF51445 305 594 4.53E-61 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily TF3313_2898 01703c9b1170d457383dd360217b0e73 603 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 99 174 2.6E-16 T 11-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 TF3313_2898 01703c9b1170d457383dd360217b0e73 603 SUPERFAMILY SSF49303 213 307 2.68E-13 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily TF3313_2898 01703c9b1170d457383dd360217b0e73 603 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 349 475 7.0E-9 T 11-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 TF3313_2898 01703c9b1170d457383dd360217b0e73 603 Gene3D G3DSA:2.60.40.10 211 306 2.4E-13 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_2898 01703c9b1170d457383dd360217b0e73 603 Gene3D G3DSA:2.60.120.260 52 208 1.4E-40 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_1787 d7275746e4a22fd68e07c6b140fec944 175 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 164 17.833 T 11-10-2018 IPR022973 Ribosomal protein L10 TF3313_1787 d7275746e4a22fd68e07c6b140fec944 175 SUPERFAMILY SSF160369 1 168 1.31E-37 T 11-10-2018 TF3313_1787 d7275746e4a22fd68e07c6b140fec944 175 Gene3D G3DSA:3.30.70.1730 2 161 2.2E-26 T 11-10-2018 TF3313_1787 d7275746e4a22fd68e07c6b140fec944 175 Pfam PF00466 Ribosomal protein L10 1 100 2.9E-19 T 11-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 TF3313_0333 377080ff27c238aa2b12c9cf4d91790e 1078 SUPERFAMILY SSF49464 30 109 1.96E-19 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_0333 377080ff27c238aa2b12c9cf4d91790e 1078 Gene3D G3DSA:2.170.130.10 103 230 8.0E-32 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_0333 377080ff27c238aa2b12c9cf4d91790e 1078 Gene3D G3DSA:2.60.40.1120 32 102 1.4E-7 T 11-10-2018 TF3313_0333 377080ff27c238aa2b12c9cf4d91790e 1078 Pfam PF00593 TonB dependent receptor 425 1037 1.3E-33 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_0333 377080ff27c238aa2b12c9cf4d91790e 1078 SUPERFAMILY SSF56935 107 1043 3.26E-96 T 11-10-2018 TF3313_0333 377080ff27c238aa2b12c9cf4d91790e 1078 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 201 231 2.5E-18 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_0333 377080ff27c238aa2b12c9cf4d91790e 1078 Pfam PF13715 CarboxypepD_reg-like domain 32 111 1.4E-17 T 11-10-2018 TF3313_0333 377080ff27c238aa2b12c9cf4d91790e 1078 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 30 1078 5.7E-268 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_0333 377080ff27c238aa2b12c9cf4d91790e 1078 Pfam PF07715 TonB-dependent Receptor Plug Domain 119 225 4.3E-22 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_2084 2dfe7874d6c4426f90fdbcbf78d0f2df 158 SUPERFAMILY SSF47240 17 156 4.68E-33 T 11-10-2018 IPR009078 Ferritin-like superfamily TF3313_2084 2dfe7874d6c4426f90fdbcbf78d0f2df 158 ProSitePatterns PS00819 Dps protein family signature 2. 66 80 - T 11-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 TF3313_2084 2dfe7874d6c4426f90fdbcbf78d0f2df 158 PIRSF PIRSF005900 1 158 5.8E-37 T 11-10-2018 IPR002177 DNA-binding protein Dps TF3313_2084 2dfe7874d6c4426f90fdbcbf78d0f2df 158 ProSitePatterns PS00818 Dps protein family signature 1. 40 56 - T 11-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 TF3313_2084 2dfe7874d6c4426f90fdbcbf78d0f2df 158 Pfam PF00210 Ferritin-like domain 20 157 4.9E-21 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 TF3313_2084 2dfe7874d6c4426f90fdbcbf78d0f2df 158 Gene3D G3DSA:1.20.1260.10 2 158 4.3E-41 T 11-10-2018 IPR012347 Ferritin-like TF3313_2084 2dfe7874d6c4426f90fdbcbf78d0f2df 158 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 40 56 6.6E-10 T 11-10-2018 IPR002177 DNA-binding protein Dps TF3313_2084 2dfe7874d6c4426f90fdbcbf78d0f2df 158 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 64 80 6.6E-10 T 11-10-2018 IPR002177 DNA-binding protein Dps TF3313_2084 2dfe7874d6c4426f90fdbcbf78d0f2df 158 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 135 153 6.6E-10 T 11-10-2018 IPR002177 DNA-binding protein Dps TF3313_1018 969218625e5168534c9e0e217aaf5f8c 78 SUPERFAMILY SSF47336 2 76 3.27E-22 T 11-10-2018 IPR036736 ACP-like superfamily TF3313_1018 969218625e5168534c9e0e217aaf5f8c 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 21.772 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 TF3313_1018 969218625e5168534c9e0e217aaf5f8c 78 Pfam PF00550 Phosphopantetheine attachment site 7 73 1.2E-15 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain TF3313_1018 969218625e5168534c9e0e217aaf5f8c 78 Gene3D G3DSA:1.10.1200.10 1 78 5.8E-28 T 11-10-2018 IPR036736 ACP-like superfamily TF3313_1018 969218625e5168534c9e0e217aaf5f8c 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site TF3313_1018 969218625e5168534c9e0e217aaf5f8c 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 76 1.7E-32 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 TF3313_1018 969218625e5168534c9e0e217aaf5f8c 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 2.0E-11 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 TF3313_2948 82eb9f8022257588187f3bd6ab89d9fe 540 SUPERFAMILY SSF56519 22 165 2.88E-23 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 TF3313_2948 82eb9f8022257588187f3bd6ab89d9fe 540 Gene3D G3DSA:3.40.710.10 171 534 8.3E-84 T 11-10-2018 TF3313_2948 82eb9f8022257588187f3bd6ab89d9fe 540 SUPERFAMILY SSF56601 167 513 7.65E-85 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TF3313_2948 82eb9f8022257588187f3bd6ab89d9fe 540 Gene3D G3DSA:3.90.1310.30 23 170 1.2E-20 T 11-10-2018 TF3313_2948 82eb9f8022257588187f3bd6ab89d9fe 540 Pfam PF03717 Penicillin-binding Protein dimerisation domain 27 146 6.6E-24 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 TF3313_2948 82eb9f8022257588187f3bd6ab89d9fe 540 Pfam PF00905 Penicillin binding protein transpeptidase domain 184 506 1.0E-49 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 TF3313_0980 0bad16fd293c3cfaa0f3b0ff8c30527e 401 SUPERFAMILY SSF48179 196 284 1.05E-25 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TF3313_0980 0bad16fd293c3cfaa0f3b0ff8c30527e 401 Gene3D G3DSA:3.40.50.720 1 194 9.7E-63 T 11-10-2018 TF3313_0980 0bad16fd293c3cfaa0f3b0ff8c30527e 401 PIRSF PIRSF500136 1 401 1.4E-143 T 11-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 TF3313_0980 0bad16fd293c3cfaa0f3b0ff8c30527e 401 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 196 283 2.4E-25 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TF3313_0980 0bad16fd293c3cfaa0f3b0ff8c30527e 401 PIRSF PIRSF000124 2 401 3.2E-76 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 TF3313_0980 0bad16fd293c3cfaa0f3b0ff8c30527e 401 Gene3D G3DSA:3.40.50.720 195 401 1.1E-54 T 11-10-2018 TF3313_0980 0bad16fd293c3cfaa0f3b0ff8c30527e 401 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 311 399 4.7E-16 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TF3313_0980 0bad16fd293c3cfaa0f3b0ff8c30527e 401 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 179 2.9E-53 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TF3313_0980 0bad16fd293c3cfaa0f3b0ff8c30527e 401 SMART SM00984 311 401 3.0E-20 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TF3313_0980 0bad16fd293c3cfaa0f3b0ff8c30527e 401 SUPERFAMILY SSF52413 304 399 2.75E-20 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 TF3313_0980 0bad16fd293c3cfaa0f3b0ff8c30527e 401 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 3 390 1.4E-114 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 TF3313_0980 0bad16fd293c3cfaa0f3b0ff8c30527e 401 SUPERFAMILY SSF51735 3 189 1.71E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_1896 78be2a102c9b5f519b5d694f624a69ae 342 Gene3D G3DSA:1.10.443.10 123 309 1.1E-45 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TF3313_1896 78be2a102c9b5f519b5d694f624a69ae 342 SUPERFAMILY SSF56349 8 310 9.42E-46 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TF3313_1896 78be2a102c9b5f519b5d694f624a69ae 342 Gene3D G3DSA:1.10.150.130 12 104 7.2E-16 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal TF3313_1896 78be2a102c9b5f519b5d694f624a69ae 342 Pfam PF00589 Phage integrase family 125 301 1.8E-30 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TF3313_1896 78be2a102c9b5f519b5d694f624a69ae 342 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 14 97 3.9E-12 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 TF3313_1239 78be2a102c9b5f519b5d694f624a69ae 342 Gene3D G3DSA:1.10.443.10 123 309 1.1E-45 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TF3313_1239 78be2a102c9b5f519b5d694f624a69ae 342 SUPERFAMILY SSF56349 8 310 9.42E-46 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TF3313_1239 78be2a102c9b5f519b5d694f624a69ae 342 Gene3D G3DSA:1.10.150.130 12 104 7.2E-16 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal TF3313_1239 78be2a102c9b5f519b5d694f624a69ae 342 Pfam PF00589 Phage integrase family 125 301 1.8E-30 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TF3313_1239 78be2a102c9b5f519b5d694f624a69ae 342 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 14 97 3.9E-12 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 TF3313_0685 fd21a6ed8717f8c8d0470a0efc369c28 523 Pfam PF01676 Metalloenzyme superfamily 16 510 3.3E-71 T 11-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 TF3313_0685 fd21a6ed8717f8c8d0470a0efc369c28 523 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 16 522 47.04 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TF3313_0685 fd21a6ed8717f8c8d0470a0efc369c28 523 PIRSF PIRSF001492 9 523 4.4E-209 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TF3313_0685 fd21a6ed8717f8c8d0470a0efc369c28 523 SUPERFAMILY SSF53649 16 521 1.44E-67 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 TF3313_0685 fd21a6ed8717f8c8d0470a0efc369c28 523 Gene3D G3DSA:3.40.720.10 18 521 7.0E-210 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 TF3313_0685 fd21a6ed8717f8c8d0470a0efc369c28 523 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 16 521 1.7E-202 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TF3313_0685 fd21a6ed8717f8c8d0470a0efc369c28 523 SUPERFAMILY SSF64158 89 315 2.09E-74 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TF3313_0685 fd21a6ed8717f8c8d0470a0efc369c28 523 Gene3D G3DSA:3.40.1450.10 89 323 7.0E-210 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TF3313_0685 fd21a6ed8717f8c8d0470a0efc369c28 523 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 94 310 2.4E-77 T 11-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TF3313_0793 77e1ea6577857c81ba1e54e5f6e42437 197 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 182 1.3E-60 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 TF3313_0793 77e1ea6577857c81ba1e54e5f6e42437 197 Pfam PF00694 Aconitase C-terminal domain 1 121 5.4E-33 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 TF3313_0793 77e1ea6577857c81ba1e54e5f6e42437 197 Gene3D G3DSA:3.20.19.10 1 179 1.8E-67 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 TF3313_0793 77e1ea6577857c81ba1e54e5f6e42437 197 SUPERFAMILY SSF52016 1 182 1.35E-52 T 11-10-2018 TF3313_0793 77e1ea6577857c81ba1e54e5f6e42437 197 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 197 35.223 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 TF3313_0257 d148552909a4d78c162ca7b4b42aa21c 1044 Gene3D G3DSA:3.20.20.80 340 622 1.1E-106 T 11-10-2018 TF3313_0257 d148552909a4d78c162ca7b4b42aa21c 1044 Gene3D G3DSA:2.60.40.10 232 339 6.4E-20 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_0257 d148552909a4d78c162ca7b4b42aa21c 1044 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 341 627 3.1E-98 T 11-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 TF3313_0257 d148552909a4d78c162ca7b4b42aa21c 1044 PRINTS PR00132 Glycosyl hydrolase family 2 signature 381 399 3.0E-34 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 TF3313_0257 d148552909a4d78c162ca7b4b42aa21c 1044 PRINTS PR00132 Glycosyl hydrolase family 2 signature 527 542 3.0E-34 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 TF3313_0257 d148552909a4d78c162ca7b4b42aa21c 1044 PRINTS PR00132 Glycosyl hydrolase family 2 signature 456 471 3.0E-34 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 TF3313_0257 d148552909a4d78c162ca7b4b42aa21c 1044 PRINTS PR00132 Glycosyl hydrolase family 2 signature 350 364 3.0E-34 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 TF3313_0257 d148552909a4d78c162ca7b4b42aa21c 1044 PRINTS PR00132 Glycosyl hydrolase family 2 signature 157 172 3.0E-34 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 TF3313_0257 d148552909a4d78c162ca7b4b42aa21c 1044 Pfam PF02929 Beta galactosidase small chain 754 1025 1.1E-67 T 11-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 TF3313_0257 d148552909a4d78c162ca7b4b42aa21c 1044 SUPERFAMILY SSF74650 751 1030 1.57E-77 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 TF3313_0257 d148552909a4d78c162ca7b4b42aa21c 1044 SMART SM01038 755 1028 2.7E-97 T 11-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 TF3313_0257 d148552909a4d78c162ca7b4b42aa21c 1044 Gene3D G3DSA:2.60.40.10 629 729 1.9E-22 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_0257 d148552909a4d78c162ca7b4b42aa21c 1044 SUPERFAMILY SSF49785 23 229 3.83E-60 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_0257 d148552909a4d78c162ca7b4b42aa21c 1044 Gene3D G3DSA:2.60.120.260 16 230 4.3E-85 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_0257 d148552909a4d78c162ca7b4b42aa21c 1044 SUPERFAMILY SSF51445 341 622 2.3E-86 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily TF3313_0257 d148552909a4d78c162ca7b4b42aa21c 1044 SUPERFAMILY SSF49303 231 339 7.19E-17 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily TF3313_0257 d148552909a4d78c162ca7b4b42aa21c 1044 SUPERFAMILY SSF49303 619 728 1.22E-24 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily TF3313_0257 d148552909a4d78c162ca7b4b42aa21c 1044 Gene3D G3DSA:2.70.98.10 736 1028 5.7E-80 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 TF3313_0257 d148552909a4d78c162ca7b4b42aa21c 1044 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 63 229 2.6E-37 T 11-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 TF3313_0257 d148552909a4d78c162ca7b4b42aa21c 1044 Pfam PF16353 Domain of unknown function(DUF4981) 637 725 1.3E-20 T 11-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 TF3313_0257 d148552909a4d78c162ca7b4b42aa21c 1044 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 391 416 - T 11-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 TF3313_0257 d148552909a4d78c162ca7b4b42aa21c 1044 Pfam PF00703 Glycosyl hydrolases family 2 231 339 4.0E-12 T 11-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 TF3313_0426 dab3f5dfe6629215144d1479f93470dc 1100 Gene3D G3DSA:3.40.50.300 495 768 3.5E-38 T 11-10-2018 TF3313_0426 dab3f5dfe6629215144d1479f93470dc 1100 Gene3D G3DSA:3.40.50.300 279 493 1.6E-46 T 11-10-2018 TF3313_0426 dab3f5dfe6629215144d1479f93470dc 1100 Gene3D G3DSA:3.90.1570.50 119 274 4.9E-16 T 11-10-2018 TF3313_0426 dab3f5dfe6629215144d1479f93470dc 1100 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 48 763 4.9E-122 T 11-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 TF3313_0426 dab3f5dfe6629215144d1479f93470dc 1100 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 14 226 4.2E-27 T 11-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 TF3313_0426 dab3f5dfe6629215144d1479f93470dc 1100 SUPERFAMILY SSF52540 264 511 1.0E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0426 dab3f5dfe6629215144d1479f93470dc 1100 Pfam PF04851 Type III restriction enzyme, res subunit 278 465 2.8E-20 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 TF3313_0426 dab3f5dfe6629215144d1479f93470dc 1100 SMART SM00487 276 492 2.8E-13 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TF3313_1146 d23fa9d43135c550d5cdfc7db7b3c5ac 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 225 2.2E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TF3313_1146 d23fa9d43135c550d5cdfc7db7b3c5ac 229 SUPERFAMILY SSF46894 134 227 8.5E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TF3313_1146 d23fa9d43135c550d5cdfc7db7b3c5ac 229 SUPERFAMILY SSF52172 1 130 5.55E-34 T 11-10-2018 IPR011006 CheY-like superfamily TF3313_1146 d23fa9d43135c550d5cdfc7db7b3c5ac 229 Gene3D G3DSA:1.10.10.10 133 229 2.7E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_1146 d23fa9d43135c550d5cdfc7db7b3c5ac 229 SMART SM00448 2 115 2.5E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TF3313_1146 d23fa9d43135c550d5cdfc7db7b3c5ac 229 SMART SM00862 153 227 2.3E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TF3313_1146 d23fa9d43135c550d5cdfc7db7b3c5ac 229 Gene3D G3DSA:3.40.50.2300 1 132 2.7E-33 T 11-10-2018 TF3313_1146 d23fa9d43135c550d5cdfc7db7b3c5ac 229 Pfam PF00072 Response regulator receiver domain 5 115 2.5E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TF3313_1500 b145bdafe082c68b01a70a4c9c0b3038 596 SMART SM01016 4 87 3.6E-11 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TF3313_1500 b145bdafe082c68b01a70a4c9c0b3038 596 PRINTS PR01038 Arginyl-tRNA synthetase signature 155 168 1.0E-18 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TF3313_1500 b145bdafe082c68b01a70a4c9c0b3038 596 PRINTS PR01038 Arginyl-tRNA synthetase signature 116 131 1.0E-18 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TF3313_1500 b145bdafe082c68b01a70a4c9c0b3038 596 PRINTS PR01038 Arginyl-tRNA synthetase signature 131 147 1.0E-18 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TF3313_1500 b145bdafe082c68b01a70a4c9c0b3038 596 PRINTS PR01038 Arginyl-tRNA synthetase signature 320 341 1.0E-18 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TF3313_1500 b145bdafe082c68b01a70a4c9c0b3038 596 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 4 86 1.4E-8 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TF3313_1500 b145bdafe082c68b01a70a4c9c0b3038 596 SUPERFAMILY SSF55190 7 98 4.71E-11 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 TF3313_1500 b145bdafe082c68b01a70a4c9c0b3038 596 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 2 596 8.4E-131 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TF3313_1500 b145bdafe082c68b01a70a4c9c0b3038 596 Pfam PF00750 tRNA synthetases class I (R) 111 461 1.4E-45 T 11-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 TF3313_1500 b145bdafe082c68b01a70a4c9c0b3038 596 Gene3D G3DSA:3.40.50.620 112 470 3.5E-107 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_1500 b145bdafe082c68b01a70a4c9c0b3038 596 Pfam PF05746 DALR anticodon binding domain 477 596 4.2E-28 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 TF3313_1500 b145bdafe082c68b01a70a4c9c0b3038 596 Hamap MF_00123 Arginine--tRNA ligase [argS]. 4 596 24.054 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TF3313_1500 b145bdafe082c68b01a70a4c9c0b3038 596 Gene3D G3DSA:1.10.730.10 471 596 6.2E-32 T 11-10-2018 TF3313_1500 b145bdafe082c68b01a70a4c9c0b3038 596 Gene3D G3DSA:3.30.1360.70 1 102 3.0E-7 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 TF3313_1500 b145bdafe082c68b01a70a4c9c0b3038 596 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 124 135 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_1500 b145bdafe082c68b01a70a4c9c0b3038 596 SUPERFAMILY SSF47323 472 596 3.66E-29 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_1500 b145bdafe082c68b01a70a4c9c0b3038 596 SMART SM00836 477 596 4.5E-38 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 TF3313_1500 b145bdafe082c68b01a70a4c9c0b3038 596 SUPERFAMILY SSF52374 113 470 1.36E-76 T 11-10-2018 TF3313_1380 5fed8ca064bb35f0a521fd1b4277ef85 689 SMART SM00487 256 447 6.0E-35 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TF3313_1380 5fed8ca064bb35f0a521fd1b4277ef85 689 SUPERFAMILY SSF50249 2 159 1.46E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TF3313_1380 5fed8ca064bb35f0a521fd1b4277ef85 689 Gene3D G3DSA:3.40.50.300 445 617 8.5E-57 T 11-10-2018 TF3313_1380 5fed8ca064bb35f0a521fd1b4277ef85 689 Gene3D G3DSA:3.40.50.300 197 438 2.2E-86 T 11-10-2018 TF3313_1380 5fed8ca064bb35f0a521fd1b4277ef85 689 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 22 652 3.4E-219 T 11-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 TF3313_1380 5fed8ca064bb35f0a521fd1b4277ef85 689 Pfam PF17191 RecG wedge domain 2 151 6.0E-15 T 11-10-2018 IPR033454 RecG, wedge domain TF3313_1380 5fed8ca064bb35f0a521fd1b4277ef85 689 Pfam PF00270 DEAD/DEAH box helicase 263 422 2.6E-21 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TF3313_1380 5fed8ca064bb35f0a521fd1b4277ef85 689 SMART SM00490 492 576 1.1E-19 T 11-10-2018 IPR001650 Helicase, C-terminal TF3313_1380 5fed8ca064bb35f0a521fd1b4277ef85 689 Gene3D G3DSA:2.40.50.140 37 133 2.7E-11 T 11-10-2018 TF3313_1380 5fed8ca064bb35f0a521fd1b4277ef85 689 SUPERFAMILY SSF52540 175 441 3.72E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1380 5fed8ca064bb35f0a521fd1b4277ef85 689 SUPERFAMILY SSF52540 379 586 3.24E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1380 5fed8ca064bb35f0a521fd1b4277ef85 689 Pfam PF00271 Helicase conserved C-terminal domain 455 575 3.0E-18 T 11-10-2018 IPR001650 Helicase, C-terminal TF3313_0189 73576de703784bcbf06107d07c0b22fa 494 Gene3D G3DSA:3.40.50.800 299 405 1.6E-31 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily TF3313_0189 73576de703784bcbf06107d07c0b22fa 494 SUPERFAMILY SSF64586 423 494 4.32E-21 T 11-10-2018 IPR017449 Prolyl-tRNA synthetase, class II GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 TF3313_0189 73576de703784bcbf06107d07c0b22fa 494 SMART SM00946 429 494 7.1E-34 T 11-10-2018 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 TF3313_0189 73576de703784bcbf06107d07c0b22fa 494 SUPERFAMILY SSF52954 294 421 2.29E-34 T 11-10-2018 TF3313_0189 73576de703784bcbf06107d07c0b22fa 494 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 118 287 1.0E-17 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_0189 73576de703784bcbf06107d07c0b22fa 494 Pfam PF03129 Anticodon binding domain 306 402 2.4E-16 T 11-10-2018 IPR004154 Anticodon-binding TF3313_0189 73576de703784bcbf06107d07c0b22fa 494 Pfam PF09180 Prolyl-tRNA synthetase, C-terminal 429 494 2.6E-25 T 11-10-2018 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 TF3313_0189 73576de703784bcbf06107d07c0b22fa 494 TIGRFAM TIGR00408 proS_fam_I: proline--tRNA ligase 12 494 1.3E-168 T 11-10-2018 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 TF3313_0189 73576de703784bcbf06107d07c0b22fa 494 SUPERFAMILY SSF55681 15 292 6.28E-74 T 11-10-2018 TF3313_0189 73576de703784bcbf06107d07c0b22fa 494 Gene3D G3DSA:3.30.930.10 5 298 2.4E-98 T 11-10-2018 TF3313_0189 73576de703784bcbf06107d07c0b22fa 494 Gene3D G3DSA:3.30.110.30 423 494 4.2E-23 T 11-10-2018 IPR017449 Prolyl-tRNA synthetase, class II GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 TF3313_0189 73576de703784bcbf06107d07c0b22fa 494 Hamap MF_01571 Proline--tRNA ligase [proS]. 10 494 44.402 T 11-10-2018 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 TF3313_2475 a9b4f1c91df0b03341b946c35b0a21c6 439 Gene3D G3DSA:3.40.50.300 1 212 4.8E-72 T 11-10-2018 TF3313_2475 a9b4f1c91df0b03341b946c35b0a21c6 439 Pfam PF00270 DEAD/DEAH box helicase 25 195 7.1E-46 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TF3313_2475 a9b4f1c91df0b03341b946c35b0a21c6 439 Gene3D G3DSA:3.40.50.300 216 379 2.5E-51 T 11-10-2018 TF3313_2475 a9b4f1c91df0b03341b946c35b0a21c6 439 SMART SM00487 20 222 8.4E-57 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TF3313_2475 a9b4f1c91df0b03341b946c35b0a21c6 439 Pfam PF00271 Helicase conserved C-terminal domain 231 338 5.4E-31 T 11-10-2018 IPR001650 Helicase, C-terminal TF3313_2475 a9b4f1c91df0b03341b946c35b0a21c6 439 SMART SM00490 258 339 2.0E-34 T 11-10-2018 IPR001650 Helicase, C-terminal TF3313_2475 a9b4f1c91df0b03341b946c35b0a21c6 439 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site TF3313_2475 a9b4f1c91df0b03341b946c35b0a21c6 439 SUPERFAMILY SSF52540 74 357 1.89E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2795 1a10d7443958d5fc63b2049b01ee2179 376 SUPERFAMILY SSF53901 3 201 2.99E-23 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TF3313_2795 1a10d7443958d5fc63b2049b01ee2179 376 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 282 359 6.5E-9 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 TF3313_2795 1a10d7443958d5fc63b2049b01ee2179 376 Gene3D G3DSA:3.40.47.10 3 204 1.6E-32 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TF3313_2795 1a10d7443958d5fc63b2049b01ee2179 376 SUPERFAMILY SSF53901 252 360 1.33E-16 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TF3313_2795 1a10d7443958d5fc63b2049b01ee2179 376 Gene3D G3DSA:3.40.47.10 230 375 1.5E-28 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TF3313_0319 04a426be3b9d8ca19dfba6271be57291 343 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 29 331 9.6E-136 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 TF3313_0319 04a426be3b9d8ca19dfba6271be57291 343 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 258 331 1.4E-33 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 TF3313_0319 04a426be3b9d8ca19dfba6271be57291 343 SUPERFAMILY SSF46785 262 331 9.07E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TF3313_0319 04a426be3b9d8ca19dfba6271be57291 343 Gene3D G3DSA:1.10.10.10 262 338 1.1E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_0319 04a426be3b9d8ca19dfba6271be57291 343 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 15 240 1.0E-109 T 11-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 TF3313_0319 04a426be3b9d8ca19dfba6271be57291 343 Gene3D G3DSA:1.10.8.60 187 261 4.0E-29 T 11-10-2018 TF3313_0319 04a426be3b9d8ca19dfba6271be57291 343 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 256 333 2.0E-30 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 TF3313_0319 04a426be3b9d8ca19dfba6271be57291 343 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 343 158.537 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 TF3313_0319 04a426be3b9d8ca19dfba6271be57291 343 Gene3D G3DSA:3.40.50.300 23 186 1.3E-37 T 11-10-2018 TF3313_0319 04a426be3b9d8ca19dfba6271be57291 343 SUPERFAMILY SSF52540 25 257 4.46E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0319 04a426be3b9d8ca19dfba6271be57291 343 SMART SM00382 56 187 8.7E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_1750 6f2dcace612eef412d7bf4d4ad7025ce 376 Gene3D G3DSA:1.20.58.1690 290 369 1.6E-22 T 11-10-2018 IPR038434 YARHG domain superfamily TF3313_1750 6f2dcace612eef412d7bf4d4ad7025ce 376 Pfam PF13308 YARHG domain 303 370 7.3E-20 T 11-10-2018 IPR025582 YARHG domain TF3313_1750 6f2dcace612eef412d7bf4d4ad7025ce 376 SMART SM01324 288 370 9.2E-15 T 11-10-2018 IPR025582 YARHG domain TF3313_2843 b506dc12dd0daafd3b4c636a7d9a415d 292 Gene3D G3DSA:3.40.50.300 80 204 5.6E-6 T 11-10-2018 TF3313_2843 b506dc12dd0daafd3b4c636a7d9a415d 292 Pfam PF13401 AAA domain 103 210 2.6E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_2886 8dd72fe861544f0912f6bf2d89f0f8c6 903 Gene3D G3DSA:2.60.40.10 443 524 9.8E-10 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_2886 8dd72fe861544f0912f6bf2d89f0f8c6 903 SUPERFAMILY SSF49265 446 578 1.88E-5 T 11-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 TF3313_2886 8dd72fe861544f0912f6bf2d89f0f8c6 903 SUPERFAMILY SSF50494 169 414 1.68E-27 T 11-10-2018 IPR009003 Peptidase S1, PA clan TF3313_2886 8dd72fe861544f0912f6bf2d89f0f8c6 903 Gene3D G3DSA:2.40.10.10 169 407 4.0E-83 T 11-10-2018 TF3313_2886 8dd72fe861544f0912f6bf2d89f0f8c6 903 Pfam PF00089 Trypsin 197 406 2.2E-7 T 11-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 TF3313_2886 8dd72fe861544f0912f6bf2d89f0f8c6 903 Gene3D G3DSA:2.60.40.10 748 821 3.3E-6 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_2886 8dd72fe861544f0912f6bf2d89f0f8c6 903 Gene3D G3DSA:2.40.10.10 191 436 4.0E-83 T 11-10-2018 TF3313_1762 f5999545456eac28f8934bae06ef05b3 759 Gene3D G3DSA:2.60.40.1080 601 686 1.7E-25 T 11-10-2018 TF3313_1762 f5999545456eac28f8934bae06ef05b3 759 Pfam PF13004 Putative binding domain, N-terminal 430 486 4.4E-6 T 11-10-2018 IPR024361 Bacteroidetes-Associated Carbohydrate-binding Often N-terminal MetaCyc: PWY-6807 TF3313_1762 f5999545456eac28f8934bae06ef05b3 759 Pfam PF13004 Putative binding domain, N-terminal 519 574 5.9E-7 T 11-10-2018 IPR024361 Bacteroidetes-Associated Carbohydrate-binding Often N-terminal MetaCyc: PWY-6807 TF3313_1762 f5999545456eac28f8934bae06ef05b3 759 Pfam PF13004 Putative binding domain, N-terminal 339 396 2.0E-8 T 11-10-2018 IPR024361 Bacteroidetes-Associated Carbohydrate-binding Often N-terminal MetaCyc: PWY-6807 TF3313_1762 f5999545456eac28f8934bae06ef05b3 759 Pfam PF13306 Leucine rich repeats (6 copies) 79 184 4.2E-18 T 11-10-2018 IPR026906 Leucine rich repeat 5 TF3313_1762 f5999545456eac28f8934bae06ef05b3 759 Gene3D G3DSA:3.80.10.10 26 209 8.6E-29 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily TF3313_1762 f5999545456eac28f8934bae06ef05b3 759 SUPERFAMILY SSF49373 602 685 6.67E-20 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments TF3313_1762 f5999545456eac28f8934bae06ef05b3 759 SMART SM00635 604 681 3.7E-9 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_1762 f5999545456eac28f8934bae06ef05b3 759 Pfam PF02368 Bacterial Ig-like domain (group 2) 605 681 5.2E-14 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_1762 f5999545456eac28f8934bae06ef05b3 759 SUPERFAMILY SSF52058 93 164 1.36E-8 T 11-10-2018 TF3313_1762 f5999545456eac28f8934bae06ef05b3 759 Gene3D G3DSA:2.60.40.10 401 487 1.9E-8 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_1762 f5999545456eac28f8934bae06ef05b3 759 Gene3D G3DSA:2.60.40.10 489 574 2.3E-8 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_1762 f5999545456eac28f8934bae06ef05b3 759 Gene3D G3DSA:2.60.40.10 307 396 1.9E-9 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_0607 c1596b3900a0a1dbc3c8672fc866a8b7 367 ProSitePatterns PS00618 RecF protein signature 2. 299 317 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 TF3313_0607 c1596b3900a0a1dbc3c8672fc866a8b7 367 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 360 1.0E-81 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 TF3313_0607 c1596b3900a0a1dbc3c8672fc866a8b7 367 Gene3D G3DSA:3.40.50.300 6 334 5.8E-89 T 11-10-2018 TF3313_0607 c1596b3900a0a1dbc3c8672fc866a8b7 367 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 TF3313_0607 c1596b3900a0a1dbc3c8672fc866a8b7 367 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 367 79.174 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 TF3313_0607 c1596b3900a0a1dbc3c8672fc866a8b7 367 SUPERFAMILY SSF52540 1 341 8.65E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0607 c1596b3900a0a1dbc3c8672fc866a8b7 367 Gene3D G3DSA:1.20.1050.90 120 298 5.8E-89 T 11-10-2018 TF3313_0607 c1596b3900a0a1dbc3c8672fc866a8b7 367 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 345 2.3E-15 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal TF3313_0674 aef1717196592eaf12d4af01cd59dd0e 775 SUPERFAMILY SSF52279 415 665 1.57E-54 T 11-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 TF3313_0674 aef1717196592eaf12d4af01cd59dd0e 775 Gene3D G3DSA:3.20.20.300 26 398 4.1E-116 T 11-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 TF3313_0674 aef1717196592eaf12d4af01cd59dd0e 775 PRINTS PR00133 Glycosyl hydrolase family 3 signature 190 206 6.9E-20 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 TF3313_0674 aef1717196592eaf12d4af01cd59dd0e 775 PRINTS PR00133 Glycosyl hydrolase family 3 signature 121 137 6.9E-20 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 TF3313_0674 aef1717196592eaf12d4af01cd59dd0e 775 PRINTS PR00133 Glycosyl hydrolase family 3 signature 227 243 6.9E-20 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 TF3313_0674 aef1717196592eaf12d4af01cd59dd0e 775 PRINTS PR00133 Glycosyl hydrolase family 3 signature 297 315 6.9E-20 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 TF3313_0674 aef1717196592eaf12d4af01cd59dd0e 775 PRINTS PR00133 Glycosyl hydrolase family 3 signature 144 163 6.9E-20 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 TF3313_0674 aef1717196592eaf12d4af01cd59dd0e 775 Pfam PF14310 Fibronectin type III-like domain 695 764 2.0E-20 T 11-10-2018 IPR026891 Fibronectin type III-like domain TF3313_0674 aef1717196592eaf12d4af01cd59dd0e 775 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 415 662 1.9E-60 T 11-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 TF3313_0674 aef1717196592eaf12d4af01cd59dd0e 775 Gene3D G3DSA:2.60.40.10 669 774 1.6E-34 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_0674 aef1717196592eaf12d4af01cd59dd0e 775 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 39 377 5.8E-69 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 TF3313_0674 aef1717196592eaf12d4af01cd59dd0e 775 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 297 314 - T 11-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 TF3313_0674 aef1717196592eaf12d4af01cd59dd0e 775 Gene3D G3DSA:3.40.50.1700 400 664 7.7E-80 T 11-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 TF3313_0674 aef1717196592eaf12d4af01cd59dd0e 775 SMART SM01217 695 764 2.1E-29 T 11-10-2018 IPR026891 Fibronectin type III-like domain TF3313_0674 aef1717196592eaf12d4af01cd59dd0e 775 SUPERFAMILY SSF51445 18 414 4.74E-107 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily TF3313_1591 bcaaf9db91a750edfc96914b2b48c2aa 686 SUPERFAMILY SSF55874 7 208 1.7E-50 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TF3313_1591 bcaaf9db91a750edfc96914b2b48c2aa 686 Gene3D G3DSA:3.30.565.10 2 222 4.8E-52 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TF3313_1591 bcaaf9db91a750edfc96914b2b48c2aa 686 Gene3D G3DSA:3.30.230.80 225 358 8.5E-37 T 11-10-2018 TF3313_1591 bcaaf9db91a750edfc96914b2b48c2aa 686 PIRSF PIRSF002583 1 649 7.3E-148 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 TF3313_1591 bcaaf9db91a750edfc96914b2b48c2aa 686 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 26 35 - T 11-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 TF3313_1591 bcaaf9db91a750edfc96914b2b48c2aa 686 SUPERFAMILY SSF54211 227 478 4.4E-66 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TF3313_1591 bcaaf9db91a750edfc96914b2b48c2aa 686 Pfam PF00183 Hsp90 protein 218 584 5.4E-48 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 TF3313_1591 bcaaf9db91a750edfc96914b2b48c2aa 686 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 150 2.1E-10 T 11-10-2018 TF3313_1591 bcaaf9db91a750edfc96914b2b48c2aa 686 PRINTS PR00775 90kDa heat shock protein signature 184 202 3.5E-34 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TF3313_1591 bcaaf9db91a750edfc96914b2b48c2aa 686 PRINTS PR00775 90kDa heat shock protein signature 91 108 3.5E-34 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TF3313_1591 bcaaf9db91a750edfc96914b2b48c2aa 686 PRINTS PR00775 90kDa heat shock protein signature 166 183 3.5E-34 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TF3313_1591 bcaaf9db91a750edfc96914b2b48c2aa 686 PRINTS PR00775 90kDa heat shock protein signature 115 137 3.5E-34 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TF3313_1591 bcaaf9db91a750edfc96914b2b48c2aa 686 PRINTS PR00775 90kDa heat shock protein signature 27 49 3.5E-34 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TF3313_1591 bcaaf9db91a750edfc96914b2b48c2aa 686 PRINTS PR00775 90kDa heat shock protein signature 73 90 3.5E-34 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TF3313_1591 bcaaf9db91a750edfc96914b2b48c2aa 686 Gene3D G3DSA:3.40.50.12450 360 477 5.5E-12 T 11-10-2018 TF3313_0519 b75a73b3137a6fbff9e7de4918e9725f 585 Pfam PF16886 ATPsynthase alpha/beta subunit N-term extension 87 205 3.6E-32 T 11-10-2018 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TF3313_0519 b75a73b3137a6fbff9e7de4918e9725f 585 Gene3D G3DSA:1.10.1140.10 441 584 3.1E-22 T 11-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TF3313_0519 b75a73b3137a6fbff9e7de4918e9725f 585 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 215 436 4.8E-76 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TF3313_0519 b75a73b3137a6fbff9e7de4918e9725f 585 SUPERFAMILY SSF52540 166 440 3.1E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0519 b75a73b3137a6fbff9e7de4918e9725f 585 Hamap MF_00309 V-type ATP synthase alpha chain [atpA]. 2 585 41.564 T 11-10-2018 IPR022878 V-type ATP synthase catalytic alpha chain GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TF3313_0519 b75a73b3137a6fbff9e7de4918e9725f 585 SUPERFAMILY SSF47917 451 534 2.12E-11 T 11-10-2018 TF3313_0519 b75a73b3137a6fbff9e7de4918e9725f 585 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 10 71 2.7E-5 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TF3313_0519 b75a73b3137a6fbff9e7de4918e9725f 585 Gene3D G3DSA:2.40.50.100 115 187 1.5E-147 T 11-10-2018 TF3313_0519 b75a73b3137a6fbff9e7de4918e9725f 585 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 427 436 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TF3313_0519 b75a73b3137a6fbff9e7de4918e9725f 585 Gene3D G3DSA:2.30.30.650 27 74 2.7E-8 T 11-10-2018 TF3313_0519 b75a73b3137a6fbff9e7de4918e9725f 585 Gene3D G3DSA:3.40.50.300 76 436 1.5E-147 T 11-10-2018 TF3313_2458 9a6fd47a985b28d2c7b4e5c58e2ffbfc 1129 SUPERFAMILY SSF56935 191 1129 1.47E-86 T 11-10-2018 TF3313_2458 9a6fd47a985b28d2c7b4e5c58e2ffbfc 1129 Gene3D G3DSA:2.60.40.1120 112 182 9.5E-6 T 11-10-2018 TF3313_2458 9a6fd47a985b28d2c7b4e5c58e2ffbfc 1129 SMART SM00965 47 97 2.2E-4 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TF3313_2458 9a6fd47a985b28d2c7b4e5c58e2ffbfc 1129 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 112 1129 6.4E-301 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_2458 9a6fd47a985b28d2c7b4e5c58e2ffbfc 1129 Pfam PF00593 TonB dependent receptor 547 1128 5.9E-30 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_2458 9a6fd47a985b28d2c7b4e5c58e2ffbfc 1129 SUPERFAMILY SSF49464 111 191 3.79E-18 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_2458 9a6fd47a985b28d2c7b4e5c58e2ffbfc 1129 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 282 312 1.0E-17 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_2458 9a6fd47a985b28d2c7b4e5c58e2ffbfc 1129 Pfam PF13715 CarboxypepD_reg-like domain 113 193 7.3E-19 T 11-10-2018 TF3313_2458 9a6fd47a985b28d2c7b4e5c58e2ffbfc 1129 Pfam PF07715 TonB-dependent Receptor Plug Domain 201 306 3.7E-17 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_2458 9a6fd47a985b28d2c7b4e5c58e2ffbfc 1129 Gene3D G3DSA:2.170.130.10 183 311 1.3E-25 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_0132 5a74e3278aab8b15b54ce0251516c168 452 Pfam PF00158 Sigma-54 interaction domain 152 316 9.9E-65 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TF3313_0132 5a74e3278aab8b15b54ce0251516c168 452 SMART SM00382 170 313 7.6E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_0132 5a74e3278aab8b15b54ce0251516c168 452 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 236 251 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TF3313_0132 5a74e3278aab8b15b54ce0251516c168 452 Gene3D G3DSA:3.40.50.2300 5 149 1.2E-25 T 11-10-2018 TF3313_0132 5a74e3278aab8b15b54ce0251516c168 452 Gene3D G3DSA:1.10.10.60 408 452 3.4E-15 T 11-10-2018 TF3313_0132 5a74e3278aab8b15b54ce0251516c168 452 Pfam PF02954 Bacterial regulatory protein, Fis family 409 450 3.8E-15 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TF3313_0132 5a74e3278aab8b15b54ce0251516c168 452 Gene3D G3DSA:1.10.8.60 321 387 1.0E-18 T 11-10-2018 TF3313_0132 5a74e3278aab8b15b54ce0251516c168 452 SUPERFAMILY SSF46689 363 452 2.41E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TF3313_0132 5a74e3278aab8b15b54ce0251516c168 452 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 416 433 8.4E-9 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TF3313_0132 5a74e3278aab8b15b54ce0251516c168 452 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 433 452 8.4E-9 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TF3313_0132 5a74e3278aab8b15b54ce0251516c168 452 SUPERFAMILY SSF52172 8 195 8.54E-31 T 11-10-2018 IPR011006 CheY-like superfamily TF3313_0132 5a74e3278aab8b15b54ce0251516c168 452 SUPERFAMILY SSF52540 151 391 2.09E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0132 5a74e3278aab8b15b54ce0251516c168 452 Pfam PF00072 Response regulator receiver domain 10 124 1.6E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TF3313_0132 5a74e3278aab8b15b54ce0251516c168 452 SMART SM00448 8 124 4.8E-14 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TF3313_0132 5a74e3278aab8b15b54ce0251516c168 452 Gene3D G3DSA:3.40.50.300 150 320 3.7E-60 T 11-10-2018 TF3313_0187 40902a4ce17c58d25631d32bbb2ce5fe 148 Pfam PF08281 Sigma-70, region 4 80 130 1.0E-12 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TF3313_0187 40902a4ce17c58d25631d32bbb2ce5fe 148 Gene3D G3DSA:1.10.10.10 58 137 4.2E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_0187 40902a4ce17c58d25631d32bbb2ce5fe 148 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 2 135 3.1E-42 T 11-10-2018 IPR014327 RNA polymerase sigma-70, Bacteroidetes type TF3313_0187 40902a4ce17c58d25631d32bbb2ce5fe 148 SUPERFAMILY SSF88946 4 46 1.29E-5 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_0187 40902a4ce17c58d25631d32bbb2ce5fe 148 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 135 9.5E-18 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TF3313_0187 40902a4ce17c58d25631d32bbb2ce5fe 148 SUPERFAMILY SSF88659 70 139 1.87E-13 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TF3313_1971 987ba81e47c871a850efb25685f8fda7 192 PRINTS PR00094 Adenylate kinase signature 5 18 3.8E-29 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TF3313_1971 987ba81e47c871a850efb25685f8fda7 192 PRINTS PR00094 Adenylate kinase signature 151 165 3.8E-29 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TF3313_1971 987ba81e47c871a850efb25685f8fda7 192 PRINTS PR00094 Adenylate kinase signature 134 149 3.8E-29 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TF3313_1971 987ba81e47c871a850efb25685f8fda7 192 PRINTS PR00094 Adenylate kinase signature 33 47 3.8E-29 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TF3313_1971 987ba81e47c871a850efb25685f8fda7 192 PRINTS PR00094 Adenylate kinase signature 82 98 3.8E-29 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TF3313_1971 987ba81e47c871a850efb25685f8fda7 192 ProSitePatterns PS00113 Adenylate kinase signature. 82 93 - T 11-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TF3313_1971 987ba81e47c871a850efb25685f8fda7 192 Hamap MF_00235 Adenylate kinase [adk]. 2 187 42.621 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TF3313_1971 987ba81e47c871a850efb25685f8fda7 192 SUPERFAMILY SSF52540 2 187 3.5E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1971 987ba81e47c871a850efb25685f8fda7 192 Pfam PF00406 Adenylate kinase 6 164 7.1E-51 T 11-10-2018 TF3313_1971 987ba81e47c871a850efb25685f8fda7 192 Gene3D G3DSA:3.40.50.300 1 192 5.6E-62 T 11-10-2018 TF3313_1330 a22c8451226892c6b424036c2348aa62 667 Pfam PF01297 Zinc-uptake complex component A periplasmic 412 650 8.3E-51 T 11-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 TF3313_1330 a22c8451226892c6b424036c2348aa62 667 PRINTS PR00691 Adhesin B signature 432 450 7.5E-6 T 11-10-2018 IPR006129 Adhesin B GO:0007155 TF3313_1330 a22c8451226892c6b424036c2348aa62 667 PRINTS PR00691 Adhesin B signature 613 630 7.5E-6 T 11-10-2018 IPR006129 Adhesin B GO:0007155 TF3313_1330 a22c8451226892c6b424036c2348aa62 667 PRINTS PR00691 Adhesin B signature 510 529 7.5E-6 T 11-10-2018 IPR006129 Adhesin B GO:0007155 TF3313_1330 a22c8451226892c6b424036c2348aa62 667 Pfam PF02687 FtsX-like permease family 283 377 7.5E-8 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TF3313_1330 a22c8451226892c6b424036c2348aa62 667 Gene3D G3DSA:3.40.50.1980 567 667 1.1E-34 T 11-10-2018 TF3313_1330 a22c8451226892c6b424036c2348aa62 667 Gene3D G3DSA:3.40.50.1980 408 565 4.4E-40 T 11-10-2018 TF3313_1330 a22c8451226892c6b424036c2348aa62 667 SUPERFAMILY SSF53807 411 665 2.45E-67 T 11-10-2018 TF3313_1330 a22c8451226892c6b424036c2348aa62 667 Pfam PF12704 MacB-like periplasmic core domain 2 223 3.7E-7 T 11-10-2018 IPR025857 MacB-like periplasmic core domain TF3313_0716 d9433d08f17ed283fe88246928ba794c 271 Gene3D G3DSA:1.10.10.10 189 243 1.2E-10 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_0716 d9433d08f17ed283fe88246928ba794c 271 SMART SM00421 192 249 6.9E-4 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TF3313_0716 d9433d08f17ed283fe88246928ba794c 271 SUPERFAMILY SSF46894 182 240 2.38E-10 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TF3313_0716 d9433d08f17ed283fe88246928ba794c 271 Pfam PF00196 Bacterial regulatory proteins, luxR family 195 240 2.4E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TF3313_0716 d9433d08f17ed283fe88246928ba794c 271 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 195 209 6.9E-7 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TF3313_0716 d9433d08f17ed283fe88246928ba794c 271 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 209 225 6.9E-7 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TF3313_0716 d9433d08f17ed283fe88246928ba794c 271 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 225 237 6.9E-7 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TF3313_2244 50ae8e7be2291a0bf2d81e166e47050b 215 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 47 214 1.0E-17 T 11-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like TF3313_2244 50ae8e7be2291a0bf2d81e166e47050b 215 SUPERFAMILY SSF89392 37 214 3.92E-23 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX TF3313_2244 50ae8e7be2291a0bf2d81e166e47050b 215 Gene3D G3DSA:2.50.20.10 34 215 2.2E-32 T 11-10-2018 TF3313_0919 c025dd5d43644998ca0b7eada65e79b6 595 Pfam PF07980 SusD family 289 595 2.4E-39 T 11-10-2018 IPR012944 RagB/SusD domain TF3313_0919 c025dd5d43644998ca0b7eada65e79b6 595 SUPERFAMILY SSF48452 20 595 7.21E-90 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0919 c025dd5d43644998ca0b7eada65e79b6 595 Gene3D G3DSA:1.25.40.390 22 588 1.1E-98 T 11-10-2018 TF3313_0919 c025dd5d43644998ca0b7eada65e79b6 595 Pfam PF14322 Starch-binding associating with outer membrane 101 213 3.1E-19 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_0046 f5ce14e05ce99a2bb3dc224a900ff326 410 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 237 8.8E-25 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 TF3313_0046 f5ce14e05ce99a2bb3dc224a900ff326 410 SUPERFAMILY SSF54637 289 409 2.49E-27 T 11-10-2018 IPR029069 HotDog domain superfamily TF3313_0046 f5ce14e05ce99a2bb3dc224a900ff326 410 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 290 403 1.3E-25 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 TF3313_0046 f5ce14e05ce99a2bb3dc224a900ff326 410 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 264 4.9E-61 T 11-10-2018 TF3313_0046 f5ce14e05ce99a2bb3dc224a900ff326 410 Gene3D G3DSA:3.30.1240.10 87 193 2.2E-77 T 11-10-2018 TF3313_0046 f5ce14e05ce99a2bb3dc224a900ff326 410 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 7 21 1.5E-5 T 11-10-2018 TF3313_0046 f5ce14e05ce99a2bb3dc224a900ff326 410 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 218 237 1.5E-5 T 11-10-2018 TF3313_0046 f5ce14e05ce99a2bb3dc224a900ff326 410 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 241 253 1.5E-5 T 11-10-2018 TF3313_0046 f5ce14e05ce99a2bb3dc224a900ff326 410 Pfam PF03061 Thioesterase superfamily 320 397 3.6E-15 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 TF3313_0046 f5ce14e05ce99a2bb3dc224a900ff326 410 Gene3D G3DSA:3.40.50.1000 4 265 2.2E-77 T 11-10-2018 IPR023214 HAD superfamily TF3313_0046 f5ce14e05ce99a2bb3dc224a900ff326 410 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 264 6.5E-53 T 11-10-2018 IPR000150 Cof family GO:0016787 TF3313_0046 f5ce14e05ce99a2bb3dc224a900ff326 410 Gene3D G3DSA:3.10.129.10 271 410 4.3E-50 T 11-10-2018 TF3313_0046 f5ce14e05ce99a2bb3dc224a900ff326 410 SUPERFAMILY SSF56784 1 269 4.75E-67 T 11-10-2018 IPR036412 HAD-like superfamily TF3313_1420 53be38834fa4b8a920f426f548e1e3e9 65 Gene3D G3DSA:1.10.287.310 1 65 5.2E-17 T 11-10-2018 TF3313_1420 53be38834fa4b8a920f426f548e1e3e9 65 Pfam PF00831 Ribosomal L29 protein 4 60 7.5E-15 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1420 53be38834fa4b8a920f426f548e1e3e9 65 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.3E-8 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1420 53be38834fa4b8a920f426f548e1e3e9 65 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 12.23 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1420 53be38834fa4b8a920f426f548e1e3e9 65 SUPERFAMILY SSF46561 1 64 1.24E-15 T 11-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_0145 a1c988e8d7a18f7d7521d939a45524ea 194 Pfam PF01121 Dephospho-CoA kinase 3 176 1.0E-37 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 TF3313_0145 a1c988e8d7a18f7d7521d939a45524ea 194 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 3 176 6.8E-28 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 TF3313_0145 a1c988e8d7a18f7d7521d939a45524ea 194 Gene3D G3DSA:3.40.50.300 1 192 6.3E-47 T 11-10-2018 TF3313_0145 a1c988e8d7a18f7d7521d939a45524ea 194 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 193 21.49 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 TF3313_0145 a1c988e8d7a18f7d7521d939a45524ea 194 SUPERFAMILY SSF52540 2 175 7.95E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1968 ecc658ddb2ad176c417af8f327025f9b 583 Gene3D G3DSA:3.40.120.10 42 197 1.4E-48 T 11-10-2018 TF3313_1968 ecc658ddb2ad176c417af8f327025f9b 583 SUPERFAMILY SSF53738 41 240 1.48E-47 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TF3313_1968 ecc658ddb2ad176c417af8f327025f9b 583 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 50 190 9.4E-41 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TF3313_1968 ecc658ddb2ad176c417af8f327025f9b 583 SUPERFAMILY SSF55957 470 572 1.96E-12 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TF3313_1968 ecc658ddb2ad176c417af8f327025f9b 583 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 328 451 3.4E-21 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TF3313_1968 ecc658ddb2ad176c417af8f327025f9b 583 Gene3D G3DSA:3.30.310.50 460 574 3.0E-6 T 11-10-2018 TF3313_1968 ecc658ddb2ad176c417af8f327025f9b 583 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 213 316 3.9E-21 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TF3313_1968 ecc658ddb2ad176c417af8f327025f9b 583 SUPERFAMILY SSF53738 308 456 1.29E-30 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TF3313_1968 ecc658ddb2ad176c417af8f327025f9b 583 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 300 315 8.7E-5 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TF3313_1968 ecc658ddb2ad176c417af8f327025f9b 583 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 147 161 8.7E-5 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TF3313_1968 ecc658ddb2ad176c417af8f327025f9b 583 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 515 569 1.6E-8 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TF3313_1968 ecc658ddb2ad176c417af8f327025f9b 583 Gene3D G3DSA:3.40.120.10 329 454 4.1E-34 T 11-10-2018 TF3313_1968 ecc658ddb2ad176c417af8f327025f9b 583 Gene3D G3DSA:3.40.120.10 212 328 1.6E-20 T 11-10-2018 TF3313_1968 ecc658ddb2ad176c417af8f327025f9b 583 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 148 157 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TF3313_1968 ecc658ddb2ad176c417af8f327025f9b 583 SUPERFAMILY SSF53738 228 316 1.71E-13 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TF3313_1143 0d3c8a7a7eef978c351863ccf96ff477 214 Pfam PF16011 Carbohydrate-binding family 9 29 214 1.3E-59 T 11-10-2018 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6717|MetaCyc: PWY-6784 TF3313_1143 0d3c8a7a7eef978c351863ccf96ff477 214 SUPERFAMILY SSF49344 52 214 1.22E-9 T 11-10-2018 TF3313_1143 0d3c8a7a7eef978c351863ccf96ff477 214 Gene3D G3DSA:2.60.40.1190 3 214 2.6E-48 T 11-10-2018 TF3313_1794 083cee8c63db9d10e56db7b1784248f3 381 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 100 365 4.8E-89 T 11-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 TF3313_1794 083cee8c63db9d10e56db7b1784248f3 381 SUPERFAMILY SSF56322 91 366 1.31E-62 T 11-10-2018 IPR005801 ADC synthase GO:0009058 TF3313_1794 083cee8c63db9d10e56db7b1784248f3 381 Gene3D G3DSA:3.60.120.10 85 369 2.5E-72 T 11-10-2018 IPR005801 ADC synthase GO:0009058 TF3313_1794 083cee8c63db9d10e56db7b1784248f3 381 Pfam PF00425 chorismate binding enzyme 111 357 2.3E-52 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal TF3313_0957 7add96f3d36bddeafa3e01b929cf5934 1022 Gene3D G3DSA:2.60.40.1120 24 93 3.3E-7 T 11-10-2018 TF3313_0957 7add96f3d36bddeafa3e01b929cf5934 1022 Gene3D G3DSA:2.170.130.10 94 242 4.0E-31 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_0957 7add96f3d36bddeafa3e01b929cf5934 1022 SUPERFAMILY SSF49464 24 103 1.29E-17 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_0957 7add96f3d36bddeafa3e01b929cf5934 1022 Pfam PF13715 CarboxypepD_reg-like domain 25 105 2.8E-18 T 11-10-2018 TF3313_0957 7add96f3d36bddeafa3e01b929cf5934 1022 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 213 243 5.9E-16 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_0957 7add96f3d36bddeafa3e01b929cf5934 1022 Pfam PF07715 TonB-dependent Receptor Plug Domain 114 237 2.2E-21 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_0957 7add96f3d36bddeafa3e01b929cf5934 1022 Pfam PF00593 TonB dependent receptor 471 1021 1.0E-26 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_0957 7add96f3d36bddeafa3e01b929cf5934 1022 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 24 1022 5.4E-216 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_0957 7add96f3d36bddeafa3e01b929cf5934 1022 SUPERFAMILY SSF56935 101 1022 3.02E-76 T 11-10-2018 TF3313_1141 9310c92cd7adbd09ddbe3c7e7791755a 514 PRINTS PR01043 Glycyl-tRNA synthetase signature 246 263 1.4E-47 T 11-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TF3313_1141 9310c92cd7adbd09ddbe3c7e7791755a 514 PRINTS PR01043 Glycyl-tRNA synthetase signature 450 469 1.4E-47 T 11-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TF3313_1141 9310c92cd7adbd09ddbe3c7e7791755a 514 PRINTS PR01043 Glycyl-tRNA synthetase signature 263 273 1.4E-47 T 11-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TF3313_1141 9310c92cd7adbd09ddbe3c7e7791755a 514 PRINTS PR01043 Glycyl-tRNA synthetase signature 214 231 1.4E-47 T 11-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TF3313_1141 9310c92cd7adbd09ddbe3c7e7791755a 514 PRINTS PR01043 Glycyl-tRNA synthetase signature 368 380 1.4E-47 T 11-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TF3313_1141 9310c92cd7adbd09ddbe3c7e7791755a 514 PRINTS PR01043 Glycyl-tRNA synthetase signature 27 41 1.4E-47 T 11-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TF3313_1141 9310c92cd7adbd09ddbe3c7e7791755a 514 PRINTS PR01043 Glycyl-tRNA synthetase signature 193 205 1.4E-47 T 11-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TF3313_1141 9310c92cd7adbd09ddbe3c7e7791755a 514 Hamap MF_00253_B Glycine--tRNA ligase [glyQS]. 5 505 46.84 T 11-10-2018 IPR022961 Glycine-tRNA ligase, bacterial GO:0004820 KEGG: 00970+6.1.1.14 TF3313_1141 9310c92cd7adbd09ddbe3c7e7791755a 514 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 212 385 2.9E-11 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_1141 9310c92cd7adbd09ddbe3c7e7791755a 514 Gene3D G3DSA:3.40.50.800 408 511 3.3E-31 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily TF3313_1141 9310c92cd7adbd09ddbe3c7e7791755a 514 TIGRFAM TIGR00389 glyS_dimeric: glycine--tRNA ligase 10 292 1.4E-84 T 11-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TF3313_1141 9310c92cd7adbd09ddbe3c7e7791755a 514 SUPERFAMILY SSF55681 8 416 3.19E-114 T 11-10-2018 TF3313_1141 9310c92cd7adbd09ddbe3c7e7791755a 514 SUPERFAMILY SSF52954 400 504 7.7E-33 T 11-10-2018 TF3313_1141 9310c92cd7adbd09ddbe3c7e7791755a 514 Pfam PF03129 Anticodon binding domain 414 502 8.8E-20 T 11-10-2018 IPR004154 Anticodon-binding TF3313_2608 62f314675ca89c47a6325ce2f064242a 836 Gene3D G3DSA:2.60.40.10 623 722 4.7E-24 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_2608 62f314675ca89c47a6325ce2f064242a 836 SUPERFAMILY SSF49785 9 195 1.7E-46 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_2608 62f314675ca89c47a6325ce2f064242a 836 SUPERFAMILY SSF51445 305 616 4.98E-80 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily TF3313_2608 62f314675ca89c47a6325ce2f064242a 836 Gene3D G3DSA:2.60.40.10 725 834 1.9E-33 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_2608 62f314675ca89c47a6325ce2f064242a 836 Pfam PF00703 Glycosyl hydrolases family 2 208 308 3.5E-12 T 11-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 TF3313_2608 62f314675ca89c47a6325ce2f064242a 836 Gene3D G3DSA:3.20.20.80 310 622 3.0E-113 T 11-10-2018 TF3313_2608 62f314675ca89c47a6325ce2f064242a 836 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 29 193 4.0E-18 T 11-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 TF3313_2608 62f314675ca89c47a6325ce2f064242a 836 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 316 541 3.2E-27 T 11-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 TF3313_2608 62f314675ca89c47a6325ce2f064242a 836 SUPERFAMILY SSF49373 726 772 2.88E-5 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments TF3313_2608 62f314675ca89c47a6325ce2f064242a 836 Gene3D G3DSA:2.60.40.10 194 308 3.9E-18 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_2608 62f314675ca89c47a6325ce2f064242a 836 Gene3D G3DSA:2.60.120.260 22 193 3.5E-49 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_2608 62f314675ca89c47a6325ce2f064242a 836 PRINTS PR00132 Glycosyl hydrolase family 2 signature 320 334 9.8E-11 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 TF3313_2608 62f314675ca89c47a6325ce2f064242a 836 PRINTS PR00132 Glycosyl hydrolase family 2 signature 421 436 9.8E-11 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 TF3313_2608 62f314675ca89c47a6325ce2f064242a 836 PRINTS PR00132 Glycosyl hydrolase family 2 signature 127 142 9.8E-11 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 TF3313_2608 62f314675ca89c47a6325ce2f064242a 836 PRINTS PR00132 Glycosyl hydrolase family 2 signature 351 369 9.8E-11 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 TF3313_2608 62f314675ca89c47a6325ce2f064242a 836 Pfam PF16355 Domain of unknown function (DUF4982) 635 716 1.9E-23 T 11-10-2018 IPR032311 Domain of unknown function DUF4982 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 TF3313_2608 62f314675ca89c47a6325ce2f064242a 836 SUPERFAMILY SSF49303 205 308 6.91E-15 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily TF3313_2423 c05f9de13722ee4de8eb3374d70f788d 429 PIRSF PIRSF005353 1 429 1.2E-173 T 11-10-2018 IPR026033 Purine permease PbuG-like TF3313_2423 c05f9de13722ee4de8eb3374d70f788d 429 Pfam PF00860 Permease family 19 390 8.4E-42 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 TF3313_0966 4a87146a4748aafd9fe230bbea61542b 386 Pfam PF14289 Domain of unknown function (DUF4369) 19 120 2.0E-12 T 11-10-2018 IPR025380 Domain of unknown function DUF4369 TF3313_0966 4a87146a4748aafd9fe230bbea61542b 386 SUPERFAMILY SSF52833 257 385 1.22E-14 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TF3313_0966 4a87146a4748aafd9fe230bbea61542b 386 Gene3D G3DSA:3.40.30.10 243 386 1.7E-24 T 11-10-2018 TF3313_0966 4a87146a4748aafd9fe230bbea61542b 386 Pfam PF13905 Thioredoxin-like 278 366 8.2E-9 T 11-10-2018 IPR012336 Thioredoxin-like fold TF3313_2489 b32f9459cf2a73e32eee0dcd37cb7163 345 Pfam PF00586 AIR synthase related protein, N-terminal domain 35 146 5.5E-20 T 11-10-2018 IPR016188 PurM-like, N-terminal domain TF3313_2489 b32f9459cf2a73e32eee0dcd37cb7163 345 SUPERFAMILY SSF56042 151 316 9.72E-32 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TF3313_2489 b32f9459cf2a73e32eee0dcd37cb7163 345 Gene3D G3DSA:3.90.650.10 154 340 4.8E-43 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TF3313_2489 b32f9459cf2a73e32eee0dcd37cb7163 345 PIRSF PIRSF005303 4 340 2.4E-99 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 TF3313_2489 b32f9459cf2a73e32eee0dcd37cb7163 345 Gene3D G3DSA:3.30.1330.10 3 149 9.6E-41 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TF3313_2489 b32f9459cf2a73e32eee0dcd37cb7163 345 SUPERFAMILY SSF55326 9 146 6.63E-32 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TF3313_2489 b32f9459cf2a73e32eee0dcd37cb7163 345 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 10 340 8.1E-99 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 TF3313_2489 b32f9459cf2a73e32eee0dcd37cb7163 345 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 9 340 26.035 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 TF3313_2489 b32f9459cf2a73e32eee0dcd37cb7163 345 Pfam PF02769 AIR synthase related protein, C-terminal domain 193 301 7.9E-6 T 11-10-2018 IPR010918 PurM-like, C-terminal domain TF3313_1905 0ecac13bfc3adeaf58d1c3ec8ee6d0c9 200 Pfam PF01618 MotA/TolQ/ExbB proton channel family 105 171 4.7E-10 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel TF3313_0111 f18a002434bc2bfb84d4a200a72ba641 270 Gene3D G3DSA:3.40.50.80 99 202 4.6E-38 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TF3313_0111 f18a002434bc2bfb84d4a200a72ba641 270 Gene3D G3DSA:2.40.30.10 1 91 3.1E-19 T 11-10-2018 TF3313_0111 f18a002434bc2bfb84d4a200a72ba641 270 SUPERFAMILY SSF63380 3 91 2.67E-18 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel TF3313_0111 f18a002434bc2bfb84d4a200a72ba641 270 SUPERFAMILY SSF52343 88 247 5.11E-30 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TF3313_0111 f18a002434bc2bfb84d4a200a72ba641 270 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 211 248 4.2E-14 T 11-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain TF3313_0111 f18a002434bc2bfb84d4a200a72ba641 270 PIRSF PIRSF006816 1 254 2.4E-63 T 11-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 TF3313_2718 3ca5f299bb590854be77a745a93b81a7 187 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 4 185 3.1E-49 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 TF3313_2718 3ca5f299bb590854be77a745a93b81a7 187 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 TF3313_2718 3ca5f299bb590854be77a745a93b81a7 187 SUPERFAMILY SSF53178 2 185 4.05E-57 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 TF3313_2718 3ca5f299bb590854be77a745a93b81a7 187 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 2 178 28.765 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 TF3313_2718 3ca5f299bb590854be77a745a93b81a7 187 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 15 28 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 TF3313_2718 3ca5f299bb590854be77a745a93b81a7 187 Gene3D G3DSA:3.40.50.1470 1 187 1.4E-59 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 TF3313_2718 3ca5f299bb590854be77a745a93b81a7 187 Pfam PF01195 Peptidyl-tRNA hydrolase 4 185 4.2E-51 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 TF3313_2404 8e808cd0dcc26adbe0965efc0d5a1a9c 650 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 5 590 15.392 T 11-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 TF3313_2404 8e808cd0dcc26adbe0965efc0d5a1a9c 650 Gene3D G3DSA:2.70.98.90 93 346 4.2E-13 T 11-10-2018 IPR038221 YidC, periplasmic domain superfamily TF3313_2404 8e808cd0dcc26adbe0965efc0d5a1a9c 650 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 384 586 1.0E-54 T 11-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2404 8e808cd0dcc26adbe0965efc0d5a1a9c 650 Pfam PF02096 60Kd inner membrane protein 385 586 4.3E-50 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TF3313_2404 8e808cd0dcc26adbe0965efc0d5a1a9c 650 PRINTS PR00701 60kDa inner membrane protein signature 103 124 1.6E-10 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TF3313_2404 8e808cd0dcc26adbe0965efc0d5a1a9c 650 PRINTS PR00701 60kDa inner membrane protein signature 448 471 1.6E-10 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TF3313_2404 8e808cd0dcc26adbe0965efc0d5a1a9c 650 PRINTS PR00701 60kDa inner membrane protein signature 269 284 1.6E-10 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TF3313_2404 8e808cd0dcc26adbe0965efc0d5a1a9c 650 Pfam PF14849 YidC periplasmic domain 98 371 2.0E-32 T 11-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain TF3313_2404 8e808cd0dcc26adbe0965efc0d5a1a9c 650 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 356 1.9E-27 T 11-10-2018 IPR028053 Membrane insertase YidC, N-terminal TF3313_0026 e9ca1cb27783b4dbb2a8c9f49dc33496 252 PIRSF PIRSF001430 1 252 2.7E-77 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 TF3313_0026 e9ca1cb27783b4dbb2a8c9f49dc33496 252 Gene3D G3DSA:3.30.70.660 107 243 7.0E-39 T 11-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 TF3313_0026 e9ca1cb27783b4dbb2a8c9f49dc33496 252 SUPERFAMILY SSF55120 1 250 8.63E-73 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TF3313_0026 e9ca1cb27783b4dbb2a8c9f49dc33496 252 Pfam PF01416 tRNA pseudouridine synthase 143 245 2.6E-24 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 TF3313_0026 e9ca1cb27783b4dbb2a8c9f49dc33496 252 Pfam PF01416 tRNA pseudouridine synthase 9 105 2.4E-7 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 TF3313_0026 e9ca1cb27783b4dbb2a8c9f49dc33496 252 Gene3D G3DSA:3.30.70.580 1 106 3.7E-33 T 11-10-2018 TF3313_0026 e9ca1cb27783b4dbb2a8c9f49dc33496 252 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 7 239 6.1E-51 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 TF3313_0026 e9ca1cb27783b4dbb2a8c9f49dc33496 252 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 244 30.891 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 TF3313_0852 0819c577d79582d152f0763d57f815a7 197 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 5 196 7.0E-34 T 11-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like TF3313_0852 0819c577d79582d152f0763d57f815a7 197 Gene3D G3DSA:3.40.50.1000 6 195 7.7E-30 T 11-10-2018 IPR023214 HAD superfamily TF3313_0852 0819c577d79582d152f0763d57f815a7 197 Gene3D G3DSA:1.20.1440.100 16 88 7.7E-30 T 11-10-2018 TF3313_0852 0819c577d79582d152f0763d57f815a7 197 Pfam PF12710 haloacid dehalogenase-like hydrolase 5 185 2.1E-33 T 11-10-2018 TF3313_0852 0819c577d79582d152f0763d57f815a7 197 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 4 186 2.7E-24 T 11-10-2018 TF3313_0852 0819c577d79582d152f0763d57f815a7 197 SUPERFAMILY SSF56784 1 192 6.79E-22 T 11-10-2018 IPR036412 HAD-like superfamily TF3313_1413 f4d1cef27c126749ff68d0fbc4feb4da 209 SUPERFAMILY SSF52166 1 207 3.79E-72 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 TF3313_1413 f4d1cef27c126749ff68d0fbc4feb4da 209 Gene3D G3DSA:3.40.1370.10 2 209 3.6E-68 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 TF3313_1413 f4d1cef27c126749ff68d0fbc4feb4da 209 Pfam PF00573 Ribosomal protein L4/L1 family 17 205 5.8E-64 T 11-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 TF3313_1413 f4d1cef27c126749ff68d0fbc4feb4da 209 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 205 4.4E-73 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1413 f4d1cef27c126749ff68d0fbc4feb4da 209 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 208 31.715 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2448 8cf6ae48a51fe75339d8273bf1e76478 1072 SUPERFAMILY SSF49464 111 191 1.44E-19 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_2448 8cf6ae48a51fe75339d8273bf1e76478 1072 Pfam PF00593 TonB dependent receptor 523 1070 2.4E-31 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_2448 8cf6ae48a51fe75339d8273bf1e76478 1072 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 284 314 3.5E-17 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_2448 8cf6ae48a51fe75339d8273bf1e76478 1072 SMART SM00965 47 97 2.2E-4 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TF3313_2448 8cf6ae48a51fe75339d8273bf1e76478 1072 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 112 1072 2.3E-204 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_2448 8cf6ae48a51fe75339d8273bf1e76478 1072 Gene3D G3DSA:2.170.130.10 182 313 1.6E-27 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_2448 8cf6ae48a51fe75339d8273bf1e76478 1072 Gene3D G3DSA:2.40.170.20 492 867 7.2E-19 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_2448 8cf6ae48a51fe75339d8273bf1e76478 1072 Gene3D G3DSA:2.60.40.1120 112 181 1.7E-7 T 11-10-2018 TF3313_2448 8cf6ae48a51fe75339d8273bf1e76478 1072 Pfam PF13715 CarboxypepD_reg-like domain 113 193 3.2E-19 T 11-10-2018 TF3313_2448 8cf6ae48a51fe75339d8273bf1e76478 1072 Pfam PF07715 TonB-dependent Receptor Plug Domain 201 308 1.1E-17 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_2448 8cf6ae48a51fe75339d8273bf1e76478 1072 SUPERFAMILY SSF56935 191 1072 1.43E-78 T 11-10-2018 TF3313_2892 aa3d2c7af393d86ec3a18d5f4bfc4b40 216 SMART SM00881 85 186 7.9E-12 T 11-10-2018 IPR003781 CoA-binding GO:0048037 TF3313_2892 aa3d2c7af393d86ec3a18d5f4bfc4b40 216 SUPERFAMILY SSF46785 13 85 2.72E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TF3313_2892 aa3d2c7af393d86ec3a18d5f4bfc4b40 216 Pfam PF02629 CoA binding domain 88 184 4.0E-18 T 11-10-2018 IPR003781 CoA-binding GO:0048037 TF3313_2892 aa3d2c7af393d86ec3a18d5f4bfc4b40 216 Pfam PF06971 Putative DNA-binding protein N-terminus 12 59 4.4E-17 T 11-10-2018 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 TF3313_2892 aa3d2c7af393d86ec3a18d5f4bfc4b40 216 Gene3D G3DSA:1.10.10.10 6 84 3.4E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_2892 aa3d2c7af393d86ec3a18d5f4bfc4b40 216 Gene3D G3DSA:3.40.50.720 85 215 2.2E-37 T 11-10-2018 TF3313_2892 aa3d2c7af393d86ec3a18d5f4bfc4b40 216 SUPERFAMILY SSF51735 91 211 3.62E-22 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_2892 aa3d2c7af393d86ec3a18d5f4bfc4b40 216 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 7 215 31.951 T 11-10-2018 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 TF3313_2454 7a266ece467abd9e3165cb9da3eecb92 439 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 6 439 6.9E-209 T 11-10-2018 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 TF3313_2454 7a266ece467abd9e3165cb9da3eecb92 439 SUPERFAMILY SSF51658 5 438 3.42E-160 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily TF3313_2454 7a266ece467abd9e3165cb9da3eecb92 439 PRINTS PR00688 Xylose isomerase signature 209 228 1.7E-75 T 11-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 TF3313_2454 7a266ece467abd9e3165cb9da3eecb92 439 PRINTS PR00688 Xylose isomerase signature 158 177 1.7E-75 T 11-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 TF3313_2454 7a266ece467abd9e3165cb9da3eecb92 439 PRINTS PR00688 Xylose isomerase signature 182 203 1.7E-75 T 11-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 TF3313_2454 7a266ece467abd9e3165cb9da3eecb92 439 PRINTS PR00688 Xylose isomerase signature 231 255 1.7E-75 T 11-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 TF3313_2454 7a266ece467abd9e3165cb9da3eecb92 439 PRINTS PR00688 Xylose isomerase signature 94 116 1.7E-75 T 11-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 TF3313_2454 7a266ece467abd9e3165cb9da3eecb92 439 PRINTS PR00688 Xylose isomerase signature 273 300 1.7E-75 T 11-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 TF3313_2454 7a266ece467abd9e3165cb9da3eecb92 439 PRINTS PR00688 Xylose isomerase signature 135 155 1.7E-75 T 11-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 TF3313_2454 7a266ece467abd9e3165cb9da3eecb92 439 PRINTS PR00688 Xylose isomerase signature 302 313 1.7E-75 T 11-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 TF3313_2454 7a266ece467abd9e3165cb9da3eecb92 439 PRINTS PR00688 Xylose isomerase signature 335 346 1.7E-75 T 11-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 TF3313_2454 7a266ece467abd9e3165cb9da3eecb92 439 Gene3D G3DSA:3.20.20.150 4 439 1.3E-178 T 11-10-2018 TF3313_2454 7a266ece467abd9e3165cb9da3eecb92 439 Hamap MF_00455 Xylose isomerase [xylA]. 13 439 51.316 T 11-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 TF3313_1357 5a5f5648db759db9ed073ab063368b54 452 Gene3D G3DSA:3.40.605.10 6 434 2.3E-164 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 TF3313_1357 5a5f5648db759db9ed073ab063368b54 452 SUPERFAMILY SSF53720 2 435 1.44E-62 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TF3313_1357 5a5f5648db759db9ed073ab063368b54 452 Pfam PF00171 Aldehyde dehydrogenase family 2 393 1.4E-25 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TF3313_1357 5a5f5648db759db9ed073ab063368b54 452 Gene3D G3DSA:3.40.309.10 211 394 2.3E-164 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 TF3313_1964 b260bb1be7c6df93cfd74ca04c9d1146 373 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 1 368 31.581 T 11-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 TF3313_1964 b260bb1be7c6df93cfd74ca04c9d1146 373 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 68 364 1.4E-126 T 11-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 TF3313_1964 b260bb1be7c6df93cfd74ca04c9d1146 373 PIRSF PIRSF016055 1 369 3.4E-151 T 11-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 TF3313_1964 b260bb1be7c6df93cfd74ca04c9d1146 373 Pfam PF03116 NQR2, RnfD, RnfE family 21 361 1.1E-102 T 11-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 TF3313_2765 04ea87c533c376d5e029e6f511d6307c 454 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 56 307 7.8E-40 T 11-10-2018 IPR017039 Virulence factor BrkB TF3313_2765 04ea87c533c376d5e029e6f511d6307c 454 Pfam PF03631 Virulence factor BrkB 62 311 1.5E-50 T 11-10-2018 IPR017039 Virulence factor BrkB TF3313_0543 f8e89ae63fb8cfbf01934f8c76d6af77 1131 Gene3D G3DSA:2.170.130.10 210 341 1.0E-29 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_0543 f8e89ae63fb8cfbf01934f8c76d6af77 1131 SUPERFAMILY SSF49464 141 221 4.71E-15 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_0543 f8e89ae63fb8cfbf01934f8c76d6af77 1131 SUPERFAMILY SSF56935 219 1131 2.44E-87 T 11-10-2018 TF3313_0543 f8e89ae63fb8cfbf01934f8c76d6af77 1131 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 313 342 2.8E-17 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_0543 f8e89ae63fb8cfbf01934f8c76d6af77 1131 Pfam PF13715 CarboxypepD_reg-like domain 142 223 3.6E-16 T 11-10-2018 TF3313_0543 f8e89ae63fb8cfbf01934f8c76d6af77 1131 Pfam PF00593 TonB dependent receptor 509 1129 3.7E-36 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_0543 f8e89ae63fb8cfbf01934f8c76d6af77 1131 Pfam PF07715 TonB-dependent Receptor Plug Domain 231 336 1.1E-19 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_0543 f8e89ae63fb8cfbf01934f8c76d6af77 1131 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 141 1131 5.1E-276 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_0543 f8e89ae63fb8cfbf01934f8c76d6af77 1131 Pfam PF07660 Secretin and TonB N terminus short domain 76 124 7.1E-7 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TF3313_2098 810a8eb23f9f59aa0fb3b66a312e7282 475 Gene3D G3DSA:1.20.1250.20 2 466 4.5E-69 T 11-10-2018 TF3313_2098 810a8eb23f9f59aa0fb3b66a312e7282 475 SUPERFAMILY SSF103473 8 472 1.96E-66 T 11-10-2018 IPR036259 MFS transporter superfamily TF3313_2098 810a8eb23f9f59aa0fb3b66a312e7282 475 Pfam PF07690 Major Facilitator Superfamily 19 415 4.9E-49 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TF3313_1576 e0a9d2c6b31196c11b58b65ef419c8f8 104 PIRSF PIRSF000077 1 104 1.1E-39 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 TF3313_1576 e0a9d2c6b31196c11b58b65ef419c8f8 104 Gene3D G3DSA:3.40.30.10 1 104 8.2E-36 T 11-10-2018 TF3313_1576 e0a9d2c6b31196c11b58b65ef419c8f8 104 Pfam PF00085 Thioredoxin 3 102 4.5E-33 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 TF3313_1576 e0a9d2c6b31196c11b58b65ef419c8f8 104 PRINTS PR00421 Thioredoxin family signature 68 79 8.2E-9 T 11-10-2018 TF3313_1576 e0a9d2c6b31196c11b58b65ef419c8f8 104 PRINTS PR00421 Thioredoxin family signature 20 28 8.2E-9 T 11-10-2018 TF3313_1576 e0a9d2c6b31196c11b58b65ef419c8f8 104 PRINTS PR00421 Thioredoxin family signature 28 37 8.2E-9 T 11-10-2018 TF3313_1576 e0a9d2c6b31196c11b58b65ef419c8f8 104 ProSitePatterns PS00194 Thioredoxin family active site. 21 39 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 TF3313_1576 e0a9d2c6b31196c11b58b65ef419c8f8 104 SUPERFAMILY SSF52833 3 104 1.05E-38 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TF3313_1576 e0a9d2c6b31196c11b58b65ef419c8f8 104 TIGRFAM TIGR01068 thioredoxin: thioredoxin 6 102 2.3E-38 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 TF3313_2298 dc5e571c97d69648fd9242abec2d1622 86 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 11-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 TF3313_2298 dc5e571c97d69648fd9242abec2d1622 86 SUPERFAMILY SSF52833 2 83 6.14E-15 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TF3313_2298 dc5e571c97d69648fd9242abec2d1622 86 Pfam PF13192 Thioredoxin domain 10 80 9.5E-9 T 11-10-2018 IPR012336 Thioredoxin-like fold TF3313_2298 dc5e571c97d69648fd9242abec2d1622 86 Gene3D G3DSA:3.40.30.10 2 84 1.2E-13 T 11-10-2018 TF3313_2936 515228d288d3c9de1544a335bf674b06 293 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 2 286 1.5E-105 T 11-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 TF3313_2936 515228d288d3c9de1544a335bf674b06 293 Pfam PF00698 Acyl transferase domain 4 280 7.0E-43 T 11-10-2018 IPR014043 Acyl transferase TF3313_2936 515228d288d3c9de1544a335bf674b06 293 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 5 293 1.2E-52 T 11-10-2018 IPR020801 Polyketide synthase, acyl transferase domain TF3313_2936 515228d288d3c9de1544a335bf674b06 293 Gene3D G3DSA:3.30.70.250 121 192 2.4E-101 T 11-10-2018 TF3313_2936 515228d288d3c9de1544a335bf674b06 293 Gene3D G3DSA:3.40.366.10 5 281 2.4E-101 T 11-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 TF3313_2936 515228d288d3c9de1544a335bf674b06 293 PIRSF PIRSF000446 1 292 5.2E-101 T 11-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 TF3313_2936 515228d288d3c9de1544a335bf674b06 293 SUPERFAMILY SSF52151 2 288 5.49E-79 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase TF3313_2936 515228d288d3c9de1544a335bf674b06 293 SUPERFAMILY SSF55048 126 187 7.46E-17 T 11-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding TF3313_0892 d0c7acf64031a2c0f94706475e0deb10 232 PRINTS PR01374 Gram-negative bacterial tonB protein signature 148 169 9.8E-7 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 TF3313_0892 d0c7acf64031a2c0f94706475e0deb10 232 PRINTS PR01374 Gram-negative bacterial tonB protein signature 66 76 9.8E-7 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 TF3313_0892 d0c7acf64031a2c0f94706475e0deb10 232 PRINTS PR01374 Gram-negative bacterial tonB protein signature 169 187 9.8E-7 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 TF3313_0892 d0c7acf64031a2c0f94706475e0deb10 232 Gene3D G3DSA:3.30.1150.10 128 231 7.2E-28 T 11-10-2018 TF3313_0892 d0c7acf64031a2c0f94706475e0deb10 232 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 155 231 3.6E-13 T 11-10-2018 IPR006260 TonB/TolA, C-terminal TF3313_0892 d0c7acf64031a2c0f94706475e0deb10 232 SUPERFAMILY SSF74653 147 228 3.66E-23 T 11-10-2018 TF3313_0892 d0c7acf64031a2c0f94706475e0deb10 232 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 154 230 7.6E-23 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 TF3313_2510 0dc6628c96401a29e7af903fe584fa81 1102 SMART SM00635 861 939 4.8E-11 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_2510 0dc6628c96401a29e7af903fe584fa81 1102 SMART SM00635 943 1019 6.2E-5 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_2510 0dc6628c96401a29e7af903fe584fa81 1102 SMART SM00635 679 757 1.6E-13 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_2510 0dc6628c96401a29e7af903fe584fa81 1102 SMART SM00635 771 849 1.3E-12 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_2510 0dc6628c96401a29e7af903fe584fa81 1102 SUPERFAMILY SSF49373 859 942 2.86E-17 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments TF3313_2510 0dc6628c96401a29e7af903fe584fa81 1102 SUPERFAMILY SSF49265 474 661 7.86E-17 T 11-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 TF3313_2510 0dc6628c96401a29e7af903fe584fa81 1102 Pfam PF00041 Fibronectin type III domain 583 657 6.8E-7 T 11-10-2018 IPR003961 Fibronectin type III GO:0005515 TF3313_2510 0dc6628c96401a29e7af903fe584fa81 1102 Pfam PF00041 Fibronectin type III domain 376 447 1.1E-9 T 11-10-2018 IPR003961 Fibronectin type III GO:0005515 TF3313_2510 0dc6628c96401a29e7af903fe584fa81 1102 Pfam PF00041 Fibronectin type III domain 272 351 4.7E-8 T 11-10-2018 IPR003961 Fibronectin type III GO:0005515 TF3313_2510 0dc6628c96401a29e7af903fe584fa81 1102 Gene3D G3DSA:2.60.40.1080 771 855 6.5E-17 T 11-10-2018 TF3313_2510 0dc6628c96401a29e7af903fe584fa81 1102 Gene3D G3DSA:2.60.40.1080 858 943 1.4E-23 T 11-10-2018 TF3313_2510 0dc6628c96401a29e7af903fe584fa81 1102 Gene3D G3DSA:2.60.40.1080 678 766 3.7E-20 T 11-10-2018 TF3313_2510 0dc6628c96401a29e7af903fe584fa81 1102 Gene3D G3DSA:2.60.40.1080 944 1023 5.2E-15 T 11-10-2018 TF3313_2510 0dc6628c96401a29e7af903fe584fa81 1102 Gene3D G3DSA:2.60.40.10 259 374 1.9E-13 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_2510 0dc6628c96401a29e7af903fe584fa81 1102 SUPERFAMILY SSF49373 945 1021 6.28E-12 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments TF3313_2510 0dc6628c96401a29e7af903fe584fa81 1102 Gene3D G3DSA:2.60.40.10 483 566 2.4E-12 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_2510 0dc6628c96401a29e7af903fe584fa81 1102 SUPERFAMILY SSF49373 678 759 9.68E-14 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments TF3313_2510 0dc6628c96401a29e7af903fe584fa81 1102 Gene3D G3DSA:2.60.40.10 579 677 5.2E-10 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_2510 0dc6628c96401a29e7af903fe584fa81 1102 Gene3D G3DSA:2.60.40.10 375 455 2.1E-10 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_2510 0dc6628c96401a29e7af903fe584fa81 1102 SUPERFAMILY SSF49373 771 853 2.67E-16 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments TF3313_2510 0dc6628c96401a29e7af903fe584fa81 1102 Pfam PF02368 Bacterial Ig-like domain (group 2) 862 935 6.8E-14 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_2510 0dc6628c96401a29e7af903fe584fa81 1102 Pfam PF02368 Bacterial Ig-like domain (group 2) 682 755 7.3E-16 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_2510 0dc6628c96401a29e7af903fe584fa81 1102 Pfam PF02368 Bacterial Ig-like domain (group 2) 945 1015 2.4E-7 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_2510 0dc6628c96401a29e7af903fe584fa81 1102 Pfam PF02368 Bacterial Ig-like domain (group 2) 772 845 2.1E-13 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_2510 0dc6628c96401a29e7af903fe584fa81 1102 SMART SM00060 475 555 9.4E-5 T 11-10-2018 IPR003961 Fibronectin type III GO:0005515 TF3313_2510 0dc6628c96401a29e7af903fe584fa81 1102 SMART SM00060 368 455 2.2E-5 T 11-10-2018 IPR003961 Fibronectin type III GO:0005515 TF3313_2510 0dc6628c96401a29e7af903fe584fa81 1102 SMART SM00060 267 353 3.3E-6 T 11-10-2018 IPR003961 Fibronectin type III GO:0005515 TF3313_2510 0dc6628c96401a29e7af903fe584fa81 1102 SMART SM00060 575 660 1.2E-5 T 11-10-2018 IPR003961 Fibronectin type III GO:0005515 TF3313_2510 0dc6628c96401a29e7af903fe584fa81 1102 SUPERFAMILY SSF49265 273 448 5.86E-23 T 11-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 TF3313_1901 071f51add81920f2f486117776e82d98 426 Hamap MF_00318 Enolase [eno]. 1 414 44.453 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TF3313_1901 071f51add81920f2f486117776e82d98 426 SMART SM01192 138 423 2.0E-212 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TF3313_1901 071f51add81920f2f486117776e82d98 426 SUPERFAMILY SSF54826 1 136 3.98E-59 T 11-10-2018 TF3313_1901 071f51add81920f2f486117776e82d98 426 SUPERFAMILY SSF51604 137 424 1.41E-127 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily TF3313_1901 071f51add81920f2f486117776e82d98 426 Pfam PF00113 Enolase, C-terminal TIM barrel domain 139 424 2.8E-126 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TF3313_1901 071f51add81920f2f486117776e82d98 426 Gene3D G3DSA:3.20.20.120 128 426 2.5E-131 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily TF3313_1901 071f51add81920f2f486117776e82d98 426 SMART SM01193 3 133 1.5E-97 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TF3313_1901 071f51add81920f2f486117776e82d98 426 Gene3D G3DSA:3.30.390.10 1 125 4.4E-58 T 11-10-2018 IPR029017 Enolase-like, N-terminal TF3313_1901 071f51add81920f2f486117776e82d98 426 PRINTS PR00148 Enolase signature 366 383 2.8E-46 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TF3313_1901 071f51add81920f2f486117776e82d98 426 PRINTS PR00148 Enolase signature 337 351 2.8E-46 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TF3313_1901 071f51add81920f2f486117776e82d98 426 PRINTS PR00148 Enolase signature 314 325 2.8E-46 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TF3313_1901 071f51add81920f2f486117776e82d98 426 PRINTS PR00148 Enolase signature 36 50 2.8E-46 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TF3313_1901 071f51add81920f2f486117776e82d98 426 PRINTS PR00148 Enolase signature 106 122 2.8E-46 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TF3313_1901 071f51add81920f2f486117776e82d98 426 PRINTS PR00148 Enolase signature 160 173 2.8E-46 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TF3313_1901 071f51add81920f2f486117776e82d98 426 ProSitePatterns PS00164 Enolase signature. 337 350 - T 11-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_1901 071f51add81920f2f486117776e82d98 426 PIRSF PIRSF001400 1 426 7.0E-190 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TF3313_1901 071f51add81920f2f486117776e82d98 426 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 3 421 4.8E-208 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TF3313_1901 071f51add81920f2f486117776e82d98 426 Pfam PF03952 Enolase, N-terminal domain 3 133 1.5E-62 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TF3313_2207 4993863ef441175451354665604d0ec3 401 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 2 394 1.8E-133 T 11-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 TF3313_2207 4993863ef441175451354665604d0ec3 401 SUPERFAMILY SSF102645 182 398 1.06E-70 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 TF3313_2207 4993863ef441175451354665604d0ec3 401 Pfam PF02441 Flavoprotein 4 173 1.7E-43 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 TF3313_2207 4993863ef441175451354665604d0ec3 401 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 184 369 1.1E-68 T 11-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 TF3313_2207 4993863ef441175451354665604d0ec3 401 SUPERFAMILY SSF52507 2 177 5.89E-58 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 TF3313_2207 4993863ef441175451354665604d0ec3 401 Gene3D G3DSA:3.40.50.1950 1 184 3.3E-58 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 TF3313_2207 4993863ef441175451354665604d0ec3 401 Gene3D G3DSA:3.40.50.10300 185 400 1.0E-74 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 TF3313_0813 4e8c3d0d860c357b725b6cdfdf7ae848 155 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 12 100 2.0E-30 T 11-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal TF3313_0813 4e8c3d0d860c357b725b6cdfdf7ae848 155 SUPERFAMILY SSF57825 105 152 7.85E-15 T 11-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily TF3313_0813 4e8c3d0d860c357b725b6cdfdf7ae848 155 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 7 154 30.825 T 11-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 TF3313_0813 4e8c3d0d860c357b725b6cdfdf7ae848 155 SUPERFAMILY SSF54893 7 103 6.28E-31 T 11-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily TF3313_0813 4e8c3d0d860c357b725b6cdfdf7ae848 155 Gene3D G3DSA:3.30.70.140 1 102 1.6E-34 T 11-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily TF3313_0813 4e8c3d0d860c357b725b6cdfdf7ae848 155 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 8 154 8.2E-48 T 11-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 TF3313_0813 4e8c3d0d860c357b725b6cdfdf7ae848 155 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 106 152 2.1E-18 T 11-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal TF3313_0813 4e8c3d0d860c357b725b6cdfdf7ae848 155 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 10 100 7.7E-31 T 11-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal TF3313_0813 4e8c3d0d860c357b725b6cdfdf7ae848 155 Gene3D G3DSA:2.30.30.20 103 153 5.9E-17 T 11-10-2018 TF3313_0757 89b338c2d0bce149d0a17b6b494f7be0 215 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TF3313_0757 89b338c2d0bce149d0a17b6b494f7be0 215 SMART SM00382 26 214 5.9E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_0757 89b338c2d0bce149d0a17b6b494f7be0 215 Gene3D G3DSA:3.40.50.300 1 215 3.9E-68 T 11-10-2018 TF3313_0757 89b338c2d0bce149d0a17b6b494f7be0 215 Pfam PF00005 ABC transporter 17 165 1.3E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TF3313_0757 89b338c2d0bce149d0a17b6b494f7be0 215 SUPERFAMILY SSF52540 1 215 1.6E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2823 b80bfa3ec48fe5ea34d3cf4a1c6db5a9 176 Gene3D G3DSA:1.10.530.10 7 168 8.4E-27 T 11-10-2018 TF3313_2823 b80bfa3ec48fe5ea34d3cf4a1c6db5a9 176 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 17 167 2.8E-15 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 TF3313_2823 b80bfa3ec48fe5ea34d3cf4a1c6db5a9 176 SMART SM00047 2 168 1.2E-5 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 TF3313_0379 35c44c5520c7794ccca6deb924a15f82 483 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 357 379 3.4E-84 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 TF3313_0379 35c44c5520c7794ccca6deb924a15f82 483 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 5 28 3.4E-84 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 TF3313_0379 35c44c5520c7794ccca6deb924a15f82 483 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 68 97 3.4E-84 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 TF3313_0379 35c44c5520c7794ccca6deb924a15f82 483 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 169 197 3.4E-84 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 TF3313_0379 35c44c5520c7794ccca6deb924a15f82 483 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 250 277 3.4E-84 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 TF3313_0379 35c44c5520c7794ccca6deb924a15f82 483 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 121 146 3.4E-84 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 TF3313_0379 35c44c5520c7794ccca6deb924a15f82 483 Gene3D G3DSA:3.40.50.720 3 181 2.6E-53 T 11-10-2018 TF3313_0379 35c44c5520c7794ccca6deb924a15f82 483 SUPERFAMILY SSF48179 178 473 7.48E-130 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TF3313_0379 35c44c5520c7794ccca6deb924a15f82 483 SMART SM01350 180 470 7.3E-224 T 11-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 TF3313_0379 35c44c5520c7794ccca6deb924a15f82 483 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 6 470 2.5E-233 T 11-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 TF3313_0379 35c44c5520c7794ccca6deb924a15f82 483 Gene3D G3DSA:1.10.1040.10 182 435 1.9E-109 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TF3313_0379 35c44c5520c7794ccca6deb924a15f82 483 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 254 266 - T 11-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 TF3313_0379 35c44c5520c7794ccca6deb924a15f82 483 PIRSF PIRSF000109 1 478 1.9E-239 T 11-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 TF3313_0379 35c44c5520c7794ccca6deb924a15f82 483 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 180 469 1.0E-131 T 11-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 TF3313_0379 35c44c5520c7794ccca6deb924a15f82 483 Gene3D G3DSA:1.20.5.320 436 483 1.5E-25 T 11-10-2018 TF3313_0379 35c44c5520c7794ccca6deb924a15f82 483 SUPERFAMILY SSF51735 5 178 2.49E-54 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_0379 35c44c5520c7794ccca6deb924a15f82 483 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 172 4.7E-51 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 TF3313_2877 d1f4f17ab303e27d1820e437fa931439 756 SUPERFAMILY SSF52540 307 698 2.28E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2877 d1f4f17ab303e27d1820e437fa931439 756 Gene3D G3DSA:3.40.50.300 481 722 9.7E-38 T 11-10-2018 TF3313_2877 d1f4f17ab303e27d1820e437fa931439 756 Pfam PF00271 Helicase conserved C-terminal domain 623 687 1.5E-9 T 11-10-2018 IPR001650 Helicase, C-terminal TF3313_2877 d1f4f17ab303e27d1820e437fa931439 756 Gene3D G3DSA:3.30.870.10 23 201 2.4E-6 T 11-10-2018 TF3313_2877 d1f4f17ab303e27d1820e437fa931439 756 SMART SM00490 603 688 3.1E-7 T 11-10-2018 IPR001650 Helicase, C-terminal TF3313_2877 d1f4f17ab303e27d1820e437fa931439 756 SUPERFAMILY SSF52540 290 522 2.21E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2877 d1f4f17ab303e27d1820e437fa931439 756 SMART SM00487 287 482 5.1E-20 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TF3313_2877 d1f4f17ab303e27d1820e437fa931439 756 Pfam PF04851 Type III restriction enzyme, res subunit 291 457 1.5E-26 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 TF3313_2877 d1f4f17ab303e27d1820e437fa931439 756 Gene3D G3DSA:3.40.50.300 280 475 1.8E-32 T 11-10-2018 TF3313_1991 d1d58d13112c12375c07c7a52bcb662e 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 247 3.0E-73 T 11-10-2018 TF3313_1991 d1d58d13112c12375c07c7a52bcb662e 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.1E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1991 d1d58d13112c12375c07c7a52bcb662e 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.1E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1991 d1d58d13112c12375c07c7a52bcb662e 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.1E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1991 d1d58d13112c12375c07c7a52bcb662e 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.1E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1991 d1d58d13112c12375c07c7a52bcb662e 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 1.1E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1991 d1d58d13112c12375c07c7a52bcb662e 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.1E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1991 d1d58d13112c12375c07c7a52bcb662e 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 4.2E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1991 d1d58d13112c12375c07c7a52bcb662e 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 4.2E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1991 d1d58d13112c12375c07c7a52bcb662e 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 4.2E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1991 d1d58d13112c12375c07c7a52bcb662e 248 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 246 1.3E-98 T 11-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 TF3313_1991 d1d58d13112c12375c07c7a52bcb662e 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TF3313_1991 d1d58d13112c12375c07c7a52bcb662e 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 187 8.3E-5 T 11-10-2018 TF3313_1991 d1d58d13112c12375c07c7a52bcb662e 248 Gene3D G3DSA:3.40.50.720 1 248 2.2E-86 T 11-10-2018 TF3313_1991 d1d58d13112c12375c07c7a52bcb662e 248 SUPERFAMILY SSF51735 5 248 3.19E-87 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_1323 b9ebbe02eac063dad731a344f0aad61e 900 Gene3D G3DSA:3.10.20.310 215 314 1.5E-18 T 11-10-2018 TF3313_1323 b9ebbe02eac063dad731a344f0aad61e 900 Gene3D G3DSA:2.40.160.50 605 900 2.8E-20 T 11-10-2018 TF3313_1323 b9ebbe02eac063dad731a344f0aad61e 900 Gene3D G3DSA:3.10.20.310 133 212 7.0E-6 T 11-10-2018 TF3313_1323 b9ebbe02eac063dad731a344f0aad61e 900 Gene3D G3DSA:3.10.20.310 315 396 5.4E-21 T 11-10-2018 TF3313_1323 b9ebbe02eac063dad731a344f0aad61e 900 Gene3D G3DSA:3.10.20.310 397 473 5.6E-19 T 11-10-2018 TF3313_1323 b9ebbe02eac063dad731a344f0aad61e 900 Gene3D G3DSA:3.10.20.310 57 128 1.6E-8 T 11-10-2018 TF3313_1323 b9ebbe02eac063dad731a344f0aad61e 900 Pfam PF07244 Surface antigen variable number repeat 314 395 3.9E-14 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 TF3313_1323 b9ebbe02eac063dad731a344f0aad61e 900 Pfam PF07244 Surface antigen variable number repeat 133 211 2.0E-5 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 TF3313_1323 b9ebbe02eac063dad731a344f0aad61e 900 Pfam PF07244 Surface antigen variable number repeat 399 471 2.7E-9 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 TF3313_1323 b9ebbe02eac063dad731a344f0aad61e 900 Pfam PF07244 Surface antigen variable number repeat 216 311 7.6E-9 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 TF3313_1323 b9ebbe02eac063dad731a344f0aad61e 900 PIRSF PIRSF006076 23 900 2.2E-178 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 TF3313_1238 f68274f3b32707697706c523307a4040 335 Pfam PF00589 Phage integrase family 112 302 1.3E-23 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TF3313_1238 f68274f3b32707697706c523307a4040 335 SUPERFAMILY SSF56349 27 307 1.49E-36 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TF3313_1238 f68274f3b32707697706c523307a4040 335 Gene3D G3DSA:1.10.443.10 103 319 1.5E-37 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TF3313_1897 f68274f3b32707697706c523307a4040 335 Pfam PF00589 Phage integrase family 112 302 1.3E-23 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TF3313_1897 f68274f3b32707697706c523307a4040 335 SUPERFAMILY SSF56349 27 307 1.49E-36 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TF3313_1897 f68274f3b32707697706c523307a4040 335 Gene3D G3DSA:1.10.443.10 103 319 1.5E-37 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TF3313_0117 789263f99db4285d20bb55e08097240a 388 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 1 372 5.5E-102 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 TF3313_0117 789263f99db4285d20bb55e08097240a 388 Pfam PF06965 Na+/H+ antiporter 1 1 372 2.6E-122 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 TF3313_0117 789263f99db4285d20bb55e08097240a 388 Gene3D G3DSA:1.20.1530.10 218 379 3.0E-43 T 11-10-2018 IPR023171 Na/H antiporter domain superfamily TF3313_0117 789263f99db4285d20bb55e08097240a 388 Gene3D G3DSA:1.20.1530.10 1 205 1.3E-75 T 11-10-2018 IPR023171 Na/H antiporter domain superfamily TF3313_0117 789263f99db4285d20bb55e08097240a 388 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 1 381 18.358 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 TF3313_0461 1512de414ce3e6bfb26a85284a921bbf 448 Gene3D G3DSA:3.30.910.30 156 315 1.5E-22 T 11-10-2018 TF3313_0461 1512de414ce3e6bfb26a85284a921bbf 448 SUPERFAMILY SSF54001 8 363 7.75E-24 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TF3313_0461 1512de414ce3e6bfb26a85284a921bbf 448 Pfam PF01640 Peptidase C10 family 187 360 6.7E-20 T 11-10-2018 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 TF3313_0461 1512de414ce3e6bfb26a85284a921bbf 448 Gene3D G3DSA:3.90.70.50 85 360 1.5E-22 T 11-10-2018 TF3313_0461 1512de414ce3e6bfb26a85284a921bbf 448 ProDom PD004169 PRECURSOR CYSTEINE STREPTOCOCCAL STREPTOPAIN PROTEINASE PROTEASE THIOL B STREPTOCOCCUS EXOTOXIN 193 360 0.009 T 11-10-2018 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 TF3313_2713 6fcf22fa231e900dd6a0b2c85499f32a 106 Pfam PF13366 PD-(D/E)XK nuclease superfamily 1 100 7.3E-37 T 11-10-2018 IPR026350 GxxExxY protein TF3313_2713 6fcf22fa231e900dd6a0b2c85499f32a 106 TIGRFAM TIGR04256 GxxExxY: GxxExxY protein 1 101 1.7E-38 T 11-10-2018 IPR026350 GxxExxY protein TF3313_0669 141d7cc5c9bca5b26414f4c6dc7ebaa8 313 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 135 219 3.5E-16 T 11-10-2018 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain TF3313_0669 141d7cc5c9bca5b26414f4c6dc7ebaa8 313 Pfam PF13412 Winged helix-turn-helix DNA-binding 254 299 3.5E-13 T 11-10-2018 TF3313_0669 141d7cc5c9bca5b26414f4c6dc7ebaa8 313 Gene3D G3DSA:3.30.565.60 61 219 4.9E-32 T 11-10-2018 IPR038475 RecG, C-terminal domain superfamily TF3313_0669 141d7cc5c9bca5b26414f4c6dc7ebaa8 313 SUPERFAMILY SSF46785 254 312 3.01E-9 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TF3313_0669 141d7cc5c9bca5b26414f4c6dc7ebaa8 313 Gene3D G3DSA:1.10.10.10 252 313 4.0E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_2949 9c09be96488a7c6720fa680750a5b1aa 481 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 436 460 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TF3313_2949 9c09be96488a7c6720fa680750a5b1aa 481 Pfam PF01098 Cell cycle protein 14 202 1.4E-21 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TF3313_2949 9c09be96488a7c6720fa680750a5b1aa 481 Pfam PF01098 Cell cycle protein 273 479 5.9E-54 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TF3313_0077 92353b5258f6ae47af92345c4716de09 396 Gene3D G3DSA:1.50.10.20 8 396 9.9E-61 T 11-10-2018 TF3313_0077 92353b5258f6ae47af92345c4716de09 396 PRINTS PR01955 Frankia sp. LanC-like protein signature 303 323 2.0E-13 T 11-10-2018 TF3313_0077 92353b5258f6ae47af92345c4716de09 396 PRINTS PR01955 Frankia sp. LanC-like protein signature 253 276 2.0E-13 T 11-10-2018 TF3313_0077 92353b5258f6ae47af92345c4716de09 396 PRINTS PR01955 Frankia sp. LanC-like protein signature 182 206 2.0E-13 T 11-10-2018 TF3313_0077 92353b5258f6ae47af92345c4716de09 396 PRINTS PR01955 Frankia sp. LanC-like protein signature 126 142 2.0E-13 T 11-10-2018 TF3313_0077 92353b5258f6ae47af92345c4716de09 396 SUPERFAMILY SSF158745 29 396 4.97E-60 T 11-10-2018 TF3313_0077 92353b5258f6ae47af92345c4716de09 396 PRINTS PR01950 LanC-like protein superfamily signature 304 317 5.2E-17 T 11-10-2018 IPR007822 Lanthionine synthetase C-like TF3313_0077 92353b5258f6ae47af92345c4716de09 396 PRINTS PR01950 LanC-like protein superfamily signature 364 381 5.2E-17 T 11-10-2018 IPR007822 Lanthionine synthetase C-like TF3313_0077 92353b5258f6ae47af92345c4716de09 396 PRINTS PR01950 LanC-like protein superfamily signature 185 201 5.2E-17 T 11-10-2018 IPR007822 Lanthionine synthetase C-like TF3313_0077 92353b5258f6ae47af92345c4716de09 396 PRINTS PR01950 LanC-like protein superfamily signature 29 47 5.2E-17 T 11-10-2018 IPR007822 Lanthionine synthetase C-like TF3313_0077 92353b5258f6ae47af92345c4716de09 396 PRINTS PR01950 LanC-like protein superfamily signature 127 142 5.2E-17 T 11-10-2018 IPR007822 Lanthionine synthetase C-like TF3313_0077 92353b5258f6ae47af92345c4716de09 396 PRINTS PR01950 LanC-like protein superfamily signature 253 273 5.2E-17 T 11-10-2018 IPR007822 Lanthionine synthetase C-like TF3313_0077 92353b5258f6ae47af92345c4716de09 396 SMART SM01260 26 394 6.7E-41 T 11-10-2018 IPR007822 Lanthionine synthetase C-like TF3313_0077 92353b5258f6ae47af92345c4716de09 396 Pfam PF05147 Lanthionine synthetase C-like protein 31 394 1.4E-46 T 11-10-2018 IPR007822 Lanthionine synthetase C-like TF3313_0591 fed5fef3d2d5fceea4dda15d5f9d70e2 488 Pfam PF03237 Terminase-like family 64 281 4.8E-9 T 11-10-2018 IPR004921 Terminase large subunit, T4likevirus-type TF3313_0591 fed5fef3d2d5fceea4dda15d5f9d70e2 488 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 334 472 6.3E-19 T 11-10-2018 IPR006517 Archaeophage PsiM2, terminase large subunit TF3313_0591 fed5fef3d2d5fceea4dda15d5f9d70e2 488 Gene3D G3DSA:3.40.50.300 12 207 1.8E-5 T 11-10-2018 TF3313_0295 349157dfe9b4d98e243e9d7c78dc19ef 349 SUPERFAMILY SSF50969 71 336 1.73E-8 T 11-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like TF3313_0295 349157dfe9b4d98e243e9d7c78dc19ef 349 Pfam PF17170 6-bladed beta-propeller 56 169 1.1E-8 T 11-10-2018 TF3313_1695 ba8b2cf6d73474accf4a529060a38d30 425 SUPERFAMILY SSF48019 239 423 1.59E-76 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 TF3313_1695 ba8b2cf6d73474accf4a529060a38d30 425 SMART SM00382 38 156 1.0E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_1695 ba8b2cf6d73474accf4a529060a38d30 425 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 6 129 1.1E-16 T 11-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 TF3313_1695 ba8b2cf6d73474accf4a529060a38d30 425 SUPERFAMILY SSF52540 2 227 4.35E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1695 ba8b2cf6d73474accf4a529060a38d30 425 Gene3D G3DSA:1.10.8.60 156 227 1.3E-7 T 11-10-2018 TF3313_1695 ba8b2cf6d73474accf4a529060a38d30 425 Gene3D G3DSA:1.10.3710.10 332 424 9.5E-31 T 11-10-2018 TF3313_1695 ba8b2cf6d73474accf4a529060a38d30 425 Gene3D G3DSA:1.20.272.10 228 331 5.7E-46 T 11-10-2018 TF3313_1695 ba8b2cf6d73474accf4a529060a38d30 425 Gene3D G3DSA:3.40.50.300 1 154 5.9E-46 T 11-10-2018 TF3313_1695 ba8b2cf6d73474accf4a529060a38d30 425 Pfam PF16193 AAA C-terminal domain 186 253 1.0E-21 T 11-10-2018 IPR032423 AAA C-terminal domain TF3313_1695 ba8b2cf6d73474accf4a529060a38d30 425 Pfam PF12002 MgsA AAA+ ATPase C terminal 254 419 2.5E-70 T 11-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal TF3313_2126 57d737ef6e12bbd1a60e5bdb0a1e0aa7 194 Gene3D G3DSA:1.10.1740.10 1 113 3.7E-16 T 11-10-2018 TF3313_2126 57d737ef6e12bbd1a60e5bdb0a1e0aa7 194 Pfam PF08281 Sigma-70, region 4 131 180 1.4E-8 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TF3313_2126 57d737ef6e12bbd1a60e5bdb0a1e0aa7 194 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 22 184 3.0E-52 T 11-10-2018 IPR014327 RNA polymerase sigma-70, Bacteroidetes type TF3313_2126 57d737ef6e12bbd1a60e5bdb0a1e0aa7 194 SUPERFAMILY SSF88659 115 189 1.74E-13 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TF3313_2126 57d737ef6e12bbd1a60e5bdb0a1e0aa7 194 Pfam PF04542 Sigma-70 region 2 27 91 5.2E-8 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_2126 57d737ef6e12bbd1a60e5bdb0a1e0aa7 194 Gene3D G3DSA:1.10.10.10 114 188 5.2E-11 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_2126 57d737ef6e12bbd1a60e5bdb0a1e0aa7 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 183 1.2E-20 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TF3313_2126 57d737ef6e12bbd1a60e5bdb0a1e0aa7 194 SUPERFAMILY SSF88946 5 103 2.67E-17 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_1997 7ae8c47442d87e2f8d9925531d83c138 228 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 175 194 1.7E-7 T 11-10-2018 TF3313_1997 7ae8c47442d87e2f8d9925531d83c138 228 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 195 215 1.7E-7 T 11-10-2018 TF3313_1997 7ae8c47442d87e2f8d9925531d83c138 228 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 157 174 1.7E-7 T 11-10-2018 TF3313_1997 7ae8c47442d87e2f8d9925531d83c138 228 PRINTS PR01021 OMPA domain signature 157 173 1.5E-12 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TF3313_1997 7ae8c47442d87e2f8d9925531d83c138 228 PRINTS PR01021 OMPA domain signature 112 134 1.5E-12 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TF3313_1997 7ae8c47442d87e2f8d9925531d83c138 228 PRINTS PR01021 OMPA domain signature 142 157 1.5E-12 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TF3313_1997 7ae8c47442d87e2f8d9925531d83c138 228 ProSitePatterns PS01068 OmpA-like domain. 144 188 - T 11-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 TF3313_1997 7ae8c47442d87e2f8d9925531d83c138 228 SUPERFAMILY SSF103088 97 212 3.92E-36 T 11-10-2018 IPR036737 OmpA-like domain superfamily TF3313_1997 7ae8c47442d87e2f8d9925531d83c138 228 Pfam PF13488 Glycine zipper 32 76 2.5E-12 T 11-10-2018 IPR039567 Glycine zipper domain TF3313_1997 7ae8c47442d87e2f8d9925531d83c138 228 Pfam PF00691 OmpA family 111 206 2.2E-22 T 11-10-2018 IPR006665 OmpA-like domain TF3313_1997 7ae8c47442d87e2f8d9925531d83c138 228 Gene3D G3DSA:3.30.1330.60 67 222 3.4E-42 T 11-10-2018 IPR036737 OmpA-like domain superfamily TF3313_2544 f19aa1e0089c0b2e18c3b8872e0edd62 258 SUPERFAMILY SSF53167 4 248 1.31E-59 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 TF3313_2544 f19aa1e0089c0b2e18c3b8872e0edd62 258 TIGRFAM TIGR01721 AMN-like: putative AMP nucleosidase 2 257 1.3E-110 T 11-10-2018 IPR010944 AMP nucleosidase, putative TF3313_2544 f19aa1e0089c0b2e18c3b8872e0edd62 258 Gene3D G3DSA:3.40.50.1580 1 248 4.1E-69 T 11-10-2018 TF3313_2544 f19aa1e0089c0b2e18c3b8872e0edd62 258 Pfam PF01048 Phosphorylase superfamily 58 230 1.1E-22 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 TF3313_0343 d84243b19073878416fa8ef7c18b40fb 421 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 206 421 3.4E-66 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TF3313_0343 d84243b19073878416fa8ef7c18b40fb 421 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 69 81 9.4E-5 T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TF3313_0343 d84243b19073878416fa8ef7c18b40fb 421 ProSitePatterns PS01347 MraY family signature 1. 69 81 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TF3313_0343 d84243b19073878416fa8ef7c18b40fb 421 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 26 419 21.41 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TF3313_0343 d84243b19073878416fa8ef7c18b40fb 421 ProSitePatterns PS01348 MraY family signature 2. 230 241 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TF3313_0343 d84243b19073878416fa8ef7c18b40fb 421 Pfam PF00953 Glycosyl transferase family 4 100 325 2.9E-43 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 TF3313_1495 f1a603c6199173912901128a056ebca2 540 SUPERFAMILY SSF49373 384 466 1.96E-14 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments TF3313_1495 f1a603c6199173912901128a056ebca2 540 Pfam PF02368 Bacterial Ig-like domain (group 2) 37 103 3.1E-5 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_1495 f1a603c6199173912901128a056ebca2 540 Pfam PF02368 Bacterial Ig-like domain (group 2) 298 378 3.4E-9 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_1495 f1a603c6199173912901128a056ebca2 540 Pfam PF02368 Bacterial Ig-like domain (group 2) 387 463 3.2E-10 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_1495 f1a603c6199173912901128a056ebca2 540 SUPERFAMILY SSF49373 35 111 4.32E-5 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments TF3313_1495 f1a603c6199173912901128a056ebca2 540 SMART SM00635 121 199 22.0 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_1495 f1a603c6199173912901128a056ebca2 540 SMART SM00635 298 379 5.6E-8 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_1495 f1a603c6199173912901128a056ebca2 540 SMART SM00635 28 108 0.3 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_1495 f1a603c6199173912901128a056ebca2 540 SMART SM00635 387 463 1.0E-11 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_1495 f1a603c6199173912901128a056ebca2 540 SMART SM00635 209 291 0.6 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_1495 f1a603c6199173912901128a056ebca2 540 SUPERFAMILY SSF49373 297 382 1.49E-10 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments TF3313_1495 f1a603c6199173912901128a056ebca2 540 Gene3D G3DSA:2.60.40.1080 206 294 2.7E-6 T 11-10-2018 TF3313_1495 f1a603c6199173912901128a056ebca2 540 Gene3D G3DSA:2.60.40.1080 31 111 8.1E-10 T 11-10-2018 TF3313_1495 f1a603c6199173912901128a056ebca2 540 Gene3D G3DSA:2.60.40.1080 296 383 7.7E-19 T 11-10-2018 TF3313_1495 f1a603c6199173912901128a056ebca2 540 Gene3D G3DSA:2.60.40.1080 384 468 1.1E-21 T 11-10-2018 TF3313_1495 f1a603c6199173912901128a056ebca2 540 Gene3D G3DSA:2.60.40.1080 112 205 1.6E-5 T 11-10-2018 TF3313_2214 936e064ee96f98c213efb1e793532bb7 652 Gene3D G3DSA:3.30.980.10 69 220 1.7E-58 T 11-10-2018 TF3313_2214 936e064ee96f98c213efb1e793532bb7 652 SUPERFAMILY SSF81271 2 61 1.16E-15 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 TF3313_2214 936e064ee96f98c213efb1e793532bb7 652 SUPERFAMILY SSF52954 536 646 2.42E-32 T 11-10-2018 TF3313_2214 936e064ee96f98c213efb1e793532bb7 652 Pfam PF03129 Anticodon binding domain 548 636 1.9E-23 T 11-10-2018 IPR004154 Anticodon-binding TF3313_2214 936e064ee96f98c213efb1e793532bb7 652 Gene3D G3DSA:3.10.20.30 1 64 9.9E-25 T 11-10-2018 IPR012675 Beta-grasp domain superfamily TF3313_2214 936e064ee96f98c213efb1e793532bb7 652 SUPERFAMILY SSF55681 242 533 4.4E-93 T 11-10-2018 TF3313_2214 936e064ee96f98c213efb1e793532bb7 652 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 170 218 1.3E-14 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TF3313_2214 936e064ee96f98c213efb1e793532bb7 652 Gene3D G3DSA:3.30.930.10 222 538 1.3E-122 T 11-10-2018 TF3313_2214 936e064ee96f98c213efb1e793532bb7 652 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 638 2.3E-219 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TF3313_2214 936e064ee96f98c213efb1e793532bb7 652 Pfam PF02824 TGS domain 2 61 2.9E-14 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 TF3313_2214 936e064ee96f98c213efb1e793532bb7 652 SUPERFAMILY SSF55186 63 240 6.93E-61 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 TF3313_2214 936e064ee96f98c213efb1e793532bb7 652 SMART SM00863 169 218 2.5E-22 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TF3313_2214 936e064ee96f98c213efb1e793532bb7 652 Gene3D G3DSA:3.40.50.800 539 651 3.9E-33 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily TF3313_2214 936e064ee96f98c213efb1e793532bb7 652 Gene3D G3DSA:3.30.54.20 131 186 1.7E-58 T 11-10-2018 TF3313_2214 936e064ee96f98c213efb1e793532bb7 652 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 641 34.258 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TF3313_2214 936e064ee96f98c213efb1e793532bb7 652 PRINTS PR01047 Threonyl-tRNA synthetase signature 471 499 6.9E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TF3313_2214 936e064ee96f98c213efb1e793532bb7 652 PRINTS PR01047 Threonyl-tRNA synthetase signature 365 388 6.9E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TF3313_2214 936e064ee96f98c213efb1e793532bb7 652 PRINTS PR01047 Threonyl-tRNA synthetase signature 514 527 6.9E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TF3313_2214 936e064ee96f98c213efb1e793532bb7 652 PRINTS PR01047 Threonyl-tRNA synthetase signature 541 553 6.9E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TF3313_2214 936e064ee96f98c213efb1e793532bb7 652 PRINTS PR01047 Threonyl-tRNA synthetase signature 332 360 6.9E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TF3313_2214 936e064ee96f98c213efb1e793532bb7 652 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 326 535 5.6E-41 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_2579 4869a1259207c86de5b5da63dbc328e3 126 SUPERFAMILY SSF109635 6 92 3.01E-5 T 11-10-2018 IPR037187 DksA, N-terminal domain superfamily TF3313_2579 4869a1259207c86de5b5da63dbc328e3 126 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 91 122 1.6E-7 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 TF3313_2579 4869a1259207c86de5b5da63dbc328e3 126 Gene3D G3DSA:1.20.120.910 1 126 1.1E-21 T 11-10-2018 TF3313_0809 dbc094cedf3817bc7177685648e0f94e 342 ProSitePatterns PS01016 Glycoprotease family signature. 99 119 - T 11-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 TF3313_0809 dbc094cedf3817bc7177685648e0f94e 342 SUPERFAMILY SSF53067 8 124 2.46E-30 T 11-10-2018 TF3313_0809 dbc094cedf3817bc7177685648e0f94e 342 Gene3D G3DSA:3.30.420.40 137 304 9.7E-114 T 11-10-2018 TF3313_0809 dbc094cedf3817bc7177685648e0f94e 342 SUPERFAMILY SSF53067 105 319 6.04E-39 T 11-10-2018 TF3313_0809 dbc094cedf3817bc7177685648e0f94e 342 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 6 342 59.795 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 TF3313_0809 dbc094cedf3817bc7177685648e0f94e 342 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 8 324 1.6E-119 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 TF3313_0809 dbc094cedf3817bc7177685648e0f94e 342 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 9 317 6.6E-102 T 11-10-2018 IPR017861 Kae1/TsaD family TF3313_0809 dbc094cedf3817bc7177685648e0f94e 342 Gene3D G3DSA:3.30.420.40 8 324 9.7E-114 T 11-10-2018 TF3313_0809 dbc094cedf3817bc7177685648e0f94e 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 9 22 2.7E-39 T 11-10-2018 IPR017861 Kae1/TsaD family TF3313_0809 dbc094cedf3817bc7177685648e0f94e 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 79 99 2.7E-39 T 11-10-2018 IPR017861 Kae1/TsaD family TF3313_0809 dbc094cedf3817bc7177685648e0f94e 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 162 183 2.7E-39 T 11-10-2018 IPR017861 Kae1/TsaD family TF3313_0809 dbc094cedf3817bc7177685648e0f94e 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 100 119 2.7E-39 T 11-10-2018 IPR017861 Kae1/TsaD family TF3313_0809 dbc094cedf3817bc7177685648e0f94e 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 274 283 2.7E-39 T 11-10-2018 IPR017861 Kae1/TsaD family TF3313_0809 dbc094cedf3817bc7177685648e0f94e 342 Pfam PF00814 Glycoprotease family 28 317 8.9E-94 T 11-10-2018 IPR000905 Gcp-like domain TF3313_1931 baff788417fd98c939f8aebcec2107f8 1025 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 24 1020 5.9E-245 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_1931 baff788417fd98c939f8aebcec2107f8 1025 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 194 223 3.3E-16 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_1931 baff788417fd98c939f8aebcec2107f8 1025 Pfam PF00593 TonB dependent receptor 379 1020 9.9E-31 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_1931 baff788417fd98c939f8aebcec2107f8 1025 SUPERFAMILY SSF49464 23 101 5.23E-14 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_1931 baff788417fd98c939f8aebcec2107f8 1025 Pfam PF07715 TonB-dependent Receptor Plug Domain 112 218 8.9E-22 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_1931 baff788417fd98c939f8aebcec2107f8 1025 SUPERFAMILY SSF56935 100 979 1.9E-89 T 11-10-2018 TF3313_1931 baff788417fd98c939f8aebcec2107f8 1025 Gene3D G3DSA:2.170.130.10 96 223 7.4E-27 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_1931 baff788417fd98c939f8aebcec2107f8 1025 Pfam PF13715 CarboxypepD_reg-like domain 25 104 1.9E-15 T 11-10-2018 TF3313_1931 baff788417fd98c939f8aebcec2107f8 1025 Gene3D G3DSA:2.40.170.20 311 769 1.4E-20 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_1931 baff788417fd98c939f8aebcec2107f8 1025 Gene3D G3DSA:2.60.40.1120 24 95 3.5E-6 T 11-10-2018 TF3313_1319 421a5d3181fc242caa3e3031d6a58e03 357 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 51 91 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 TF3313_1319 421a5d3181fc242caa3e3031d6a58e03 357 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 9 320 1.7E-78 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 TF3313_1319 421a5d3181fc242caa3e3031d6a58e03 357 SUPERFAMILY SSF53597 148 322 2.87E-38 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 TF3313_1319 421a5d3181fc242caa3e3031d6a58e03 357 PIRSF PIRSF006769 1 344 5.3E-100 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 TF3313_1319 421a5d3181fc242caa3e3031d6a58e03 357 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 1 102 2.6E-18 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain TF3313_1319 421a5d3181fc242caa3e3031d6a58e03 357 Gene3D G3DSA:3.40.140.10 1 144 1.6E-41 T 11-10-2018 TF3313_1319 421a5d3181fc242caa3e3031d6a58e03 357 SUPERFAMILY SSF53927 4 146 1.01E-40 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 TF3313_1319 421a5d3181fc242caa3e3031d6a58e03 357 Gene3D G3DSA:3.40.430.10 145 340 3.2E-45 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 TF3313_1319 421a5d3181fc242caa3e3031d6a58e03 357 Pfam PF01872 RibD C-terminal domain 150 319 1.4E-32 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 TF3313_2524 25272e46daac8afcf8d0d1f58376f24c 246 Gene3D G3DSA:1.25.40.10 21 90 3.5E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2524 25272e46daac8afcf8d0d1f58376f24c 246 Gene3D G3DSA:1.25.40.10 91 172 1.8E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2524 25272e46daac8afcf8d0d1f58376f24c 246 Pfam PF00515 Tetratricopeptide repeat 106 139 2.3E-8 T 11-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 TF3313_2524 25272e46daac8afcf8d0d1f58376f24c 246 Pfam PF13414 TPR repeat 34 74 3.2E-7 T 11-10-2018 TF3313_2524 25272e46daac8afcf8d0d1f58376f24c 246 SMART SM00028 27 60 0.046 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2524 25272e46daac8afcf8d0d1f58376f24c 246 SMART SM00028 61 94 0.23 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2524 25272e46daac8afcf8d0d1f58376f24c 246 SMART SM00028 106 139 2.1E-7 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2524 25272e46daac8afcf8d0d1f58376f24c 246 SUPERFAMILY SSF48452 28 155 9.28E-23 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1498 26a8e87b972b09b01d7b9768a4743be0 646 Pfam PF00890 FAD binding domain 36 448 2.9E-59 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 TF3313_1498 26a8e87b972b09b01d7b9768a4743be0 646 SUPERFAMILY SSF56425 262 409 2.24E-31 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 TF3313_1498 26a8e87b972b09b01d7b9768a4743be0 646 SUPERFAMILY SSF46977 501 644 7.06E-40 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TF3313_1498 26a8e87b972b09b01d7b9768a4743be0 646 Gene3D G3DSA:3.50.50.60 36 457 4.7E-101 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TF3313_1498 26a8e87b972b09b01d7b9768a4743be0 646 SUPERFAMILY SSF51905 30 483 2.09E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TF3313_1498 26a8e87b972b09b01d7b9768a4743be0 646 TIGRFAM TIGR01811 sdhA_Bsu: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 37 644 1.9E-298 T 11-10-2018 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 TF3313_1498 26a8e87b972b09b01d7b9768a4743be0 646 Gene3D G3DSA:1.20.58.100 482 598 7.2E-26 T 11-10-2018 TF3313_1498 26a8e87b972b09b01d7b9768a4743be0 646 Gene3D G3DSA:3.90.700.10 293 423 4.7E-101 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 TF3313_1498 26a8e87b972b09b01d7b9768a4743be0 646 Pfam PF02910 Fumarate reductase flavoprotein C-term 510 644 1.5E-35 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TF3313_1498 26a8e87b972b09b01d7b9768a4743be0 646 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 37 56 2.8E-8 T 11-10-2018 TF3313_1498 26a8e87b972b09b01d7b9768a4743be0 646 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 412 434 2.8E-8 T 11-10-2018 TF3313_1303 62381feded8462ab776af79257a4595a 434 Gene3D G3DSA:3.20.20.70 83 415 1.3E-42 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_1303 62381feded8462ab776af79257a4595a 434 Pfam PF13394 4Fe-4S single cluster domain 94 194 1.4E-8 T 11-10-2018 TF3313_1303 62381feded8462ab776af79257a4595a 434 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 316 398 1.5E-9 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain TF3313_1303 62381feded8462ab776af79257a4595a 434 SUPERFAMILY SSF102114 86 389 3.53E-36 T 11-10-2018 TF3313_1303 62381feded8462ab776af79257a4595a 434 Pfam PF04055 Radical SAM superfamily 89 240 1.6E-17 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TF3313_1596 11f88f24d3e54ba9206e61e706d6a6f4 217 Hamap MF_00942 Endonuclease III [nth]. 1 211 37.88 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 TF3313_1596 11f88f24d3e54ba9206e61e706d6a6f4 217 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 167 1.4E-22 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 TF3313_1596 11f88f24d3e54ba9206e61e706d6a6f4 217 PIRSF PIRSF001435 1 213 1.6E-47 T 11-10-2018 TF3313_1596 11f88f24d3e54ba9206e61e706d6a6f4 217 TIGRFAM TIGR01083 nth: endonuclease III 8 196 5.7E-75 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 TF3313_1596 11f88f24d3e54ba9206e61e706d6a6f4 217 SUPERFAMILY SSF48150 2 210 2.04E-71 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 TF3313_1596 11f88f24d3e54ba9206e61e706d6a6f4 217 SMART SM00478 39 187 2.3E-56 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 TF3313_1596 11f88f24d3e54ba9206e61e706d6a6f4 217 ProSitePatterns PS01155 Endonuclease III family signature. 103 132 - T 11-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 TF3313_1596 11f88f24d3e54ba9206e61e706d6a6f4 217 Gene3D G3DSA:1.10.1670.10 16 205 8.0E-73 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 TF3313_1596 11f88f24d3e54ba9206e61e706d6a6f4 217 Pfam PF00633 Helix-hairpin-helix motif 101 128 4.6E-9 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 TF3313_1596 11f88f24d3e54ba9206e61e706d6a6f4 217 Gene3D G3DSA:1.10.340.30 22 133 8.0E-73 T 11-10-2018 TF3313_1412 ce6364f9967f70d9cfab6f81d619485c 205 SUPERFAMILY SSF50447 2 204 2.56E-75 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TF3313_1412 ce6364f9967f70d9cfab6f81d619485c 205 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 203 2.4E-85 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1412 ce6364f9967f70d9cfab6f81d619485c 205 Gene3D G3DSA:2.40.30.10 121 205 1.0E-16 T 11-10-2018 TF3313_1412 ce6364f9967f70d9cfab6f81d619485c 205 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 205 37.111 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1412 ce6364f9967f70d9cfab6f81d619485c 205 ProSitePatterns PS00474 Ribosomal protein L3 signature. 100 123 - T 11-10-2018 IPR019926 Ribosomal protein L3, conserved site TF3313_1412 ce6364f9967f70d9cfab6f81d619485c 205 Pfam PF00297 Ribosomal protein L3 96 182 2.7E-15 T 11-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1412 ce6364f9967f70d9cfab6f81d619485c 205 Gene3D G3DSA:2.40.50.620 31 92 8.7E-20 T 11-10-2018 TF3313_0688 6856dcfd3bbe2c904a9b5b816b154967 168 Gene3D G3DSA:3.40.109.10 1 168 5.1E-46 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TF3313_0688 6856dcfd3bbe2c904a9b5b816b154967 168 Pfam PF00881 Nitroreductase family 64 150 1.5E-14 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 TF3313_0688 6856dcfd3bbe2c904a9b5b816b154967 168 Pfam PF00881 Nitroreductase family 8 60 3.4E-11 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 TF3313_0688 6856dcfd3bbe2c904a9b5b816b154967 168 SUPERFAMILY SSF55469 1 168 2.36E-46 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TF3313_0610 9e00d0d1b96058bafdd8c1621c153b19 188 Gene3D G3DSA:3.40.50.300 7 179 4.1E-57 T 11-10-2018 TF3313_0610 9e00d0d1b96058bafdd8c1621c153b19 188 Gene3D G3DSA:3.30.63.10 34 94 4.1E-57 T 11-10-2018 TF3313_0610 9e00d0d1b96058bafdd8c1621c153b19 188 Pfam PF00625 Guanylate kinase 3 177 1.0E-42 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit TF3313_0610 9e00d0d1b96058bafdd8c1621c153b19 188 Hamap MF_00328 Guanylate kinase [gmk]. 1 186 33.086 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 TF3313_0610 9e00d0d1b96058bafdd8c1621c153b19 188 SUPERFAMILY SSF52540 2 183 1.22E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0610 9e00d0d1b96058bafdd8c1621c153b19 188 SMART SM00072 2 183 6.8E-43 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit TF3313_0610 9e00d0d1b96058bafdd8c1621c153b19 188 ProSitePatterns PS00856 Guanylate kinase-like signature. 37 54 - T 11-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 TF3313_0610 9e00d0d1b96058bafdd8c1621c153b19 188 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 3 180 2.0E-62 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 TF3313_2101 503cc812bd0a0581d5f0cfe9b445d8e2 401 Pfam PF09113 Peptide-N-glycosidase F, C terminal 241 398 9.3E-47 T 11-10-2018 IPR015197 Peptide-N-glycosidase F, C-terminal TF3313_2101 503cc812bd0a0581d5f0cfe9b445d8e2 401 SMART SM01290 22 215 1.9E-56 T 11-10-2018 IPR015196 Peptide-N-glycosidase F, N-terminal TF3313_2101 503cc812bd0a0581d5f0cfe9b445d8e2 401 Gene3D G3DSA:2.60.120.230 225 401 5.2E-71 T 11-10-2018 IPR014784 Copper type II, ascorbate-dependent monooxygenase-like, C-terminal GO:0016715|GO:0055114 TF3313_2101 503cc812bd0a0581d5f0cfe9b445d8e2 401 SUPERFAMILY SSF49742 239 362 1.31E-17 T 11-10-2018 IPR008977 PHM/PNGase F domain superfamily GO:0003824 TF3313_2101 503cc812bd0a0581d5f0cfe9b445d8e2 401 Gene3D G3DSA:2.60.120.1570 15 224 1.3E-69 T 11-10-2018 TF3313_2101 503cc812bd0a0581d5f0cfe9b445d8e2 401 Pfam PF09112 Peptide-N-glycosidase F, N terminal 22 214 9.9E-60 T 11-10-2018 IPR015196 Peptide-N-glycosidase F, N-terminal TF3313_2359 f29125a2c5ac9b45ccf49dd46b6c9473 558 Gene3D G3DSA:3.30.70.1450 202 280 1.3E-5 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TF3313_2359 f29125a2c5ac9b45ccf49dd46b6c9473 558 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 27 169 1.3E-33 T 11-10-2018 IPR006512 YidE/YbjL duplication TF3313_2359 f29125a2c5ac9b45ccf49dd46b6c9473 558 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 388 541 3.3E-44 T 11-10-2018 IPR006512 YidE/YbjL duplication TF3313_2359 f29125a2c5ac9b45ccf49dd46b6c9473 558 SUPERFAMILY SSF116726 290 370 2.62E-13 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TF3313_2359 f29125a2c5ac9b45ccf49dd46b6c9473 558 SUPERFAMILY SSF116726 208 282 1.24E-5 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TF3313_2359 f29125a2c5ac9b45ccf49dd46b6c9473 558 Gene3D G3DSA:3.30.70.1450 301 377 1.8E-11 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TF3313_2359 f29125a2c5ac9b45ccf49dd46b6c9473 558 Pfam PF06826 Predicted Permease Membrane Region 20 181 1.8E-40 T 11-10-2018 IPR006512 YidE/YbjL duplication TF3313_2359 f29125a2c5ac9b45ccf49dd46b6c9473 558 Pfam PF06826 Predicted Permease Membrane Region 383 554 5.7E-43 T 11-10-2018 IPR006512 YidE/YbjL duplication TF3313_2359 f29125a2c5ac9b45ccf49dd46b6c9473 558 Pfam PF02080 TrkA-C domain 305 369 1.9E-11 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TF3313_2359 f29125a2c5ac9b45ccf49dd46b6c9473 558 Pfam PF02080 TrkA-C domain 214 280 2.3E-7 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TF3313_0446 0547e9c9cfd5221b056feea75ed1d5d5 297 Pfam PF01926 50S ribosome-binding GTPase 11 124 6.7E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TF3313_0446 0547e9c9cfd5221b056feea75ed1d5d5 297 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 11 31 2.7E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TF3313_0446 0547e9c9cfd5221b056feea75ed1d5d5 297 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 104 122 2.7E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TF3313_0446 0547e9c9cfd5221b056feea75ed1d5d5 297 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 164 6.1E-24 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TF3313_0446 0547e9c9cfd5221b056feea75ed1d5d5 297 Gene3D G3DSA:3.30.300.20 185 296 1.6E-40 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta TF3313_0446 0547e9c9cfd5221b056feea75ed1d5d5 297 SUPERFAMILY SSF54814 181 295 1.24E-39 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 TF3313_0446 0547e9c9cfd5221b056feea75ed1d5d5 297 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 277 4.1E-82 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_0446 0547e9c9cfd5221b056feea75ed1d5d5 297 Pfam PF07650 KH domain 207 283 3.6E-19 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_0446 0547e9c9cfd5221b056feea75ed1d5d5 297 Gene3D G3DSA:3.40.50.300 3 184 1.8E-43 T 11-10-2018 TF3313_0446 0547e9c9cfd5221b056feea75ed1d5d5 297 SUPERFAMILY SSF52540 13 204 2.27E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0446 0547e9c9cfd5221b056feea75ed1d5d5 297 Hamap MF_00367 GTPase Era [era]. 6 294 34.522 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1849 9782b1db433431a0da9373ce71320204 232 Pfam PF01863 Protein of unknown function DUF45 23 228 2.9E-41 T 11-10-2018 IPR002725 Protein of unknown function DUF45 TF3313_1849 9782b1db433431a0da9373ce71320204 232 Gene3D G3DSA:3.30.2010.10 141 230 1.4E-16 T 11-10-2018 TF3313_0451 83622547deba09c2ec3f5fb894ac2d85 791 Pfam PF07971 Glycosyl hydrolase family 92 287 772 1.4E-177 T 11-10-2018 IPR012939 Glycosyl hydrolase family 92 TF3313_0451 83622547deba09c2ec3f5fb894ac2d85 791 Gene3D G3DSA:1.20.1050.60 398 487 1.6E-256 T 11-10-2018 TF3313_0451 83622547deba09c2ec3f5fb894ac2d85 791 Gene3D G3DSA:3.30.2080.10 345 777 1.6E-256 T 11-10-2018 TF3313_0451 83622547deba09c2ec3f5fb894ac2d85 791 Gene3D G3DSA:2.70.98.10 43 397 1.6E-256 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 TF3313_0451 83622547deba09c2ec3f5fb894ac2d85 791 SUPERFAMILY SSF48208 310 771 7.31E-31 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 TF3313_0451 83622547deba09c2ec3f5fb894ac2d85 791 Gene3D G3DSA:1.20.1610.10 488 649 1.6E-256 T 11-10-2018 TF3313_0451 83622547deba09c2ec3f5fb894ac2d85 791 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 23 778 1.9E-203 T 11-10-2018 IPR005887 Alpha-1,2-mannosidase, putative TF3313_2526 42fad0a543da016e9ea25e93e1bd015f 329 Pfam PF00092 von Willebrand factor type A domain 90 281 3.5E-33 T 11-10-2018 IPR002035 von Willebrand factor, type A TF3313_2526 42fad0a543da016e9ea25e93e1bd015f 329 SMART SM00327 88 288 4.5E-18 T 11-10-2018 IPR002035 von Willebrand factor, type A TF3313_2526 42fad0a543da016e9ea25e93e1bd015f 329 SUPERFAMILY SSF53300 86 265 1.06E-40 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TF3313_2526 42fad0a543da016e9ea25e93e1bd015f 329 Gene3D G3DSA:3.40.50.410 80 292 3.3E-59 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TF3313_2526 42fad0a543da016e9ea25e93e1bd015f 329 Pfam PF07584 Aerotolerance regulator N-terminal 1 75 9.8E-13 T 11-10-2018 IPR024163 Aerotolerance regulator, N-terminal TF3313_0251 803b9ebf0f4f3441b68dc8b4756df1dd 165 Gene3D G3DSA:3.90.960.10 3 164 3.0E-49 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 TF3313_0251 803b9ebf0f4f3441b68dc8b4756df1dd 165 SUPERFAMILY SSF55826 6 163 1.96E-39 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 TF3313_0251 803b9ebf0f4f3441b68dc8b4756df1dd 165 Pfam PF04073 Aminoacyl-tRNA editing domain 23 149 3.9E-25 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 TF3313_2081 ef1dcfe0136f00e6d486fa48486821cf 154 Pfam PF09719 Putative redox-active protein (C_GCAxxG_C_C) 21 148 2.1E-30 T 11-10-2018 IPR010181 CGCAxxGCC motif TF3313_2081 ef1dcfe0136f00e6d486fa48486821cf 154 TIGRFAM TIGR01909 C_GCAxxG_C_C: C_GCAxxG_C_C family protein 21 146 1.5E-16 T 11-10-2018 IPR010181 CGCAxxGCC motif TF3313_2597 4876fa0be9bd1e73df349859063a9ee0 459 SUPERFAMILY SSF55920 166 454 4.71E-55 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like TF3313_2597 4876fa0be9bd1e73df349859063a9ee0 459 SMART SM01011 2 134 9.8E-27 T 11-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 TF3313_2597 4876fa0be9bd1e73df349859063a9ee0 459 SUPERFAMILY SSF53092 1 144 1.1E-28 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal TF3313_2597 4876fa0be9bd1e73df349859063a9ee0 459 Gene3D G3DSA:3.40.350.10 3 167 3.3E-18 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal TF3313_2597 4876fa0be9bd1e73df349859063a9ee0 459 Pfam PF05195 Aminopeptidase P, N-terminal domain 7 121 1.4E-20 T 11-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 TF3313_2597 4876fa0be9bd1e73df349859063a9ee0 459 Pfam PF00557 Metallopeptidase family M24 172 436 3.7E-43 T 11-10-2018 IPR000994 Peptidase M24 TF3313_2597 4876fa0be9bd1e73df349859063a9ee0 459 Gene3D G3DSA:3.90.230.10 168 459 1.9E-77 T 11-10-2018 TF3313_2082 88fcbe0eeb87e9d03ee2e02e7958e33f 53 PIRSF PIRSF000071 1 53 6.0E-29 T 11-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 TF3313_2082 88fcbe0eeb87e9d03ee2e02e7958e33f 53 Gene3D G3DSA:2.20.28.10 1 53 7.4E-29 T 11-10-2018 TF3313_2082 88fcbe0eeb87e9d03ee2e02e7958e33f 53 Pfam PF00301 Rubredoxin 3 49 5.1E-25 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 TF3313_2082 88fcbe0eeb87e9d03ee2e02e7958e33f 53 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 11-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 TF3313_2082 88fcbe0eeb87e9d03ee2e02e7958e33f 53 SUPERFAMILY SSF57802 1 53 5.55E-24 T 11-10-2018 TF3313_2082 88fcbe0eeb87e9d03ee2e02e7958e33f 53 PRINTS PR00163 Rubredoxin signature 3 19 3.7E-12 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 TF3313_2082 88fcbe0eeb87e9d03ee2e02e7958e33f 53 PRINTS PR00163 Rubredoxin signature 33 49 3.7E-12 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 TF3313_2283 ab0460436e5dd17f9b78829a6f80c357 251 Pfam PF00121 Triosephosphate isomerase 5 248 1.0E-89 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_2283 ab0460436e5dd17f9b78829a6f80c357 251 ProSitePatterns PS00171 Triosephosphate isomerase active site. 166 176 - T 11-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_2283 ab0460436e5dd17f9b78829a6f80c357 251 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 250 58.828 T 11-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_2283 ab0460436e5dd17f9b78829a6f80c357 251 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 6.3E-60 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_2283 ab0460436e5dd17f9b78829a6f80c357 251 SUPERFAMILY SSF51351 1 250 5.5E-89 T 11-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_2283 ab0460436e5dd17f9b78829a6f80c357 251 Gene3D G3DSA:3.20.20.70 1 251 6.8E-94 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_0638 3d795cef926ee641cd333b55d7410c7b 81 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 7 71 3.0E-9 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0638 3d795cef926ee641cd333b55d7410c7b 81 Gene3D G3DSA:2.60.15.10 1 81 2.2E-20 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0638 3d795cef926ee641cd333b55d7410c7b 81 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 2 78 1.1E-18 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0638 3d795cef926ee641cd333b55d7410c7b 81 SUPERFAMILY SSF51344 2 79 2.22E-14 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0365 a05c2776eddab171f87e1543e1c3236a 216 SUPERFAMILY SSF51366 4 215 2.47E-69 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 TF3313_0365 a05c2776eddab171f87e1543e1c3236a 216 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 4 214 8.5E-82 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 TF3313_0365 a05c2776eddab171f87e1543e1c3236a 216 Pfam PF00834 Ribulose-phosphate 3 epimerase family 4 201 4.5E-75 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 TF3313_0365 a05c2776eddab171f87e1543e1c3236a 216 PIRSF PIRSF001461 1 216 6.3E-83 T 11-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 TF3313_0365 a05c2776eddab171f87e1543e1c3236a 216 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 32 46 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 TF3313_0365 a05c2776eddab171f87e1543e1c3236a 216 Gene3D G3DSA:3.20.20.70 1 215 2.7E-79 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_0003 35e81211d28874616fd7106ff4b74efd 118 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 2 113 9.0E-41 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_0003 35e81211d28874616fd7106ff4b74efd 118 Gene3D G3DSA:2.30.30.790 2 114 1.7E-13 T 11-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_0003 35e81211d28874616fd7106ff4b74efd 118 SUPERFAMILY SSF50104 1 113 7.52E-39 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily TF3313_0003 35e81211d28874616fd7106ff4b74efd 118 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 25.717 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_0003 35e81211d28874616fd7106ff4b74efd 118 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 11-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_0003 35e81211d28874616fd7106ff4b74efd 118 PRINTS PR00061 Ribosomal protein L19 signature 88 113 5.4E-32 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_0003 35e81211d28874616fd7106ff4b74efd 118 PRINTS PR00061 Ribosomal protein L19 signature 34 63 5.4E-32 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_0003 35e81211d28874616fd7106ff4b74efd 118 PRINTS PR00061 Ribosomal protein L19 signature 4 33 5.4E-32 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_0003 35e81211d28874616fd7106ff4b74efd 118 PIRSF PIRSF002191 1 118 1.9E-44 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_0003 35e81211d28874616fd7106ff4b74efd 118 Pfam PF01245 Ribosomal protein L19 5 113 3.9E-43 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1646 f6596c6c619ecf8bdf77b8effbe9f04a 1176 Pfam PF07660 Secretin and TonB N terminus short domain 63 113 1.5E-9 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TF3313_1646 f6596c6c619ecf8bdf77b8effbe9f04a 1176 SUPERFAMILY SSF49464 130 211 3.66E-17 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_1646 f6596c6c619ecf8bdf77b8effbe9f04a 1176 SUPERFAMILY SSF56935 211 1176 6.11E-70 T 11-10-2018 TF3313_1646 f6596c6c619ecf8bdf77b8effbe9f04a 1176 Pfam PF13715 CarboxypepD_reg-like domain 132 213 1.4E-18 T 11-10-2018 TF3313_1646 f6596c6c619ecf8bdf77b8effbe9f04a 1176 SMART SM00965 63 114 2.0E-5 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TF3313_1646 f6596c6c619ecf8bdf77b8effbe9f04a 1176 Pfam PF07715 TonB-dependent Receptor Plug Domain 221 327 3.4E-15 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_1646 f6596c6c619ecf8bdf77b8effbe9f04a 1176 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 131 1175 2.9E-282 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_1646 f6596c6c619ecf8bdf77b8effbe9f04a 1176 Gene3D G3DSA:2.40.170.20 784 1154 3.8E-11 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_1646 f6596c6c619ecf8bdf77b8effbe9f04a 1176 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 303 333 1.5E-17 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_1646 f6596c6c619ecf8bdf77b8effbe9f04a 1176 Gene3D G3DSA:2.60.40.1120 132 201 9.7E-7 T 11-10-2018 TF3313_1646 f6596c6c619ecf8bdf77b8effbe9f04a 1176 Gene3D G3DSA:2.170.130.10 202 332 2.3E-23 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_0803 e07b085e12b45d789d6d70022c8ac8b0 92 SUPERFAMILY SSF143011 1 92 2.75E-23 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TF3313_0803 e07b085e12b45d789d6d70022c8ac8b0 92 PIRSF PIRSF006156 1 92 5.8E-26 T 11-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin TF3313_0803 e07b085e12b45d789d6d70022c8ac8b0 92 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 2 92 4.0E-29 T 11-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin TF3313_0803 e07b085e12b45d789d6d70022c8ac8b0 92 Gene3D G3DSA:3.30.2310.20 1 92 8.5E-30 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TF3313_0803 e07b085e12b45d789d6d70022c8ac8b0 92 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 3 92 7.7E-23 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TF3313_1339 e549794a6fb9b45297e11047e4f14ce6 139 Pfam PF01220 Dehydroquinase class II 3 137 1.4E-57 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TF3313_1339 e549794a6fb9b45297e11047e4f14ce6 139 PIRSF PIRSF001399 1 139 9.3E-58 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TF3313_1339 e549794a6fb9b45297e11047e4f14ce6 139 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 3 137 2.7E-56 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TF3313_1339 e549794a6fb9b45297e11047e4f14ce6 139 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 11-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TF3313_1339 e549794a6fb9b45297e11047e4f14ce6 139 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 139 61.496 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TF3313_1339 e549794a6fb9b45297e11047e4f14ce6 139 SUPERFAMILY SSF52304 3 138 1.03E-55 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TF3313_1339 e549794a6fb9b45297e11047e4f14ce6 139 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 4 137 8.0E-51 T 11-10-2018 TF3313_1339 e549794a6fb9b45297e11047e4f14ce6 139 Gene3D G3DSA:3.40.50.9100 1 139 6.2E-59 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TF3313_0001 ae83285a78aeeb51833dbe27671d1db4 467 Gene3D G3DSA:1.10.1750.10 366 466 1.0E-30 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 TF3313_0001 ae83285a78aeeb51833dbe27671d1db4 467 Gene3D G3DSA:1.10.8.60 298 365 2.2E-19 T 11-10-2018 TF3313_0001 ae83285a78aeeb51833dbe27671d1db4 467 Gene3D G3DSA:3.30.300.180 3 82 5.2E-17 T 11-10-2018 IPR038454 DnaA, N-terminal domain superfamily TF3313_0001 ae83285a78aeeb51833dbe27671d1db4 467 Gene3D G3DSA:3.40.50.300 120 295 1.2E-44 T 11-10-2018 TF3313_0001 ae83285a78aeeb51833dbe27671d1db4 467 SUPERFAMILY SSF52540 131 340 2.53E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0001 ae83285a78aeeb51833dbe27671d1db4 467 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 9 462 3.1E-141 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 TF3313_0001 ae83285a78aeeb51833dbe27671d1db4 467 SMART SM00760 375 444 2.3E-31 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 TF3313_0001 ae83285a78aeeb51833dbe27671d1db4 467 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 6 466 27.262 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 TF3313_0001 ae83285a78aeeb51833dbe27671d1db4 467 Pfam PF00308 Bacterial dnaA protein 131 347 3.1E-75 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA TF3313_0001 ae83285a78aeeb51833dbe27671d1db4 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 229 243 7.3E-37 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like TF3313_0001 ae83285a78aeeb51833dbe27671d1db4 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 263 290 7.3E-37 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like TF3313_0001 ae83285a78aeeb51833dbe27671d1db4 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 197 211 7.3E-37 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like TF3313_0001 ae83285a78aeeb51833dbe27671d1db4 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 165 185 7.3E-37 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like TF3313_0001 ae83285a78aeeb51833dbe27671d1db4 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 425 444 7.3E-37 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like TF3313_0001 ae83285a78aeeb51833dbe27671d1db4 467 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 376 444 1.7E-27 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 TF3313_0001 ae83285a78aeeb51833dbe27671d1db4 467 SUPERFAMILY SSF48295 365 467 1.78E-30 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 TF3313_0001 ae83285a78aeeb51833dbe27671d1db4 467 Pfam PF11638 DnaA N-terminal domain 8 64 7.9E-13 T 11-10-2018 IPR024633 DnaA N-terminal domain TF3313_0001 ae83285a78aeeb51833dbe27671d1db4 467 SMART SM00382 164 370 4.8E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_0001 ae83285a78aeeb51833dbe27671d1db4 467 ProSitePatterns PS01008 DnaA protein signature. 425 444 - T 11-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 TF3313_0478 834f7eec009ef54bf90d5ec5a1b1fc8c 446 SUPERFAMILY SSF116726 138 218 3.4E-12 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TF3313_0478 834f7eec009ef54bf90d5ec5a1b1fc8c 446 Pfam PF02254 TrkA-N domain 232 347 3.2E-21 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 TF3313_0478 834f7eec009ef54bf90d5ec5a1b1fc8c 446 Pfam PF02254 TrkA-N domain 3 123 1.2E-20 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 TF3313_0478 834f7eec009ef54bf90d5ec5a1b1fc8c 446 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 3.5E-11 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 TF3313_0478 834f7eec009ef54bf90d5ec5a1b1fc8c 446 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 3.5E-11 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 TF3313_0478 834f7eec009ef54bf90d5ec5a1b1fc8c 446 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 3.5E-11 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 TF3313_0478 834f7eec009ef54bf90d5ec5a1b1fc8c 446 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 3.5E-11 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 TF3313_0478 834f7eec009ef54bf90d5ec5a1b1fc8c 446 Gene3D G3DSA:3.30.70.1450 365 446 1.0E-13 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TF3313_0478 834f7eec009ef54bf90d5ec5a1b1fc8c 446 Gene3D G3DSA:3.40.50.720 231 361 4.4E-29 T 11-10-2018 TF3313_0478 834f7eec009ef54bf90d5ec5a1b1fc8c 446 Gene3D G3DSA:3.40.50.720 2 137 3.8E-35 T 11-10-2018 TF3313_0478 834f7eec009ef54bf90d5ec5a1b1fc8c 446 SUPERFAMILY SSF51735 1 149 2.71E-29 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_0478 834f7eec009ef54bf90d5ec5a1b1fc8c 446 Gene3D G3DSA:3.30.70.1450 138 226 4.4E-14 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TF3313_0478 834f7eec009ef54bf90d5ec5a1b1fc8c 446 SUPERFAMILY SSF116726 375 445 1.31E-9 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TF3313_0478 834f7eec009ef54bf90d5ec5a1b1fc8c 446 Pfam PF02080 TrkA-C domain 378 445 4.1E-9 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TF3313_0478 834f7eec009ef54bf90d5ec5a1b1fc8c 446 Pfam PF02080 TrkA-C domain 156 219 4.9E-9 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TF3313_0478 834f7eec009ef54bf90d5ec5a1b1fc8c 446 SUPERFAMILY SSF51735 230 368 1.63E-24 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_0096 26c0fbbcd84fa6b1b2cf7f20d700e4dc 596 Pfam PF00005 ABC transporter 364 513 6.7E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TF3313_0096 26c0fbbcd84fa6b1b2cf7f20d700e4dc 596 Gene3D G3DSA:1.20.1560.10 27 331 3.7E-45 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TF3313_0096 26c0fbbcd84fa6b1b2cf7f20d700e4dc 596 SUPERFAMILY SSF52540 342 583 3.3E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0096 26c0fbbcd84fa6b1b2cf7f20d700e4dc 596 ProSitePatterns PS00211 ABC transporters family signature. 485 499 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TF3313_0096 26c0fbbcd84fa6b1b2cf7f20d700e4dc 596 SMART SM00382 373 565 1.5E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_0096 26c0fbbcd84fa6b1b2cf7f20d700e4dc 596 SUPERFAMILY SSF90123 33 334 1.83E-51 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TF3313_0096 26c0fbbcd84fa6b1b2cf7f20d700e4dc 596 Gene3D G3DSA:3.40.50.300 338 595 3.9E-86 T 11-10-2018 TF3313_0096 26c0fbbcd84fa6b1b2cf7f20d700e4dc 596 Pfam PF00664 ABC transporter transmembrane region 62 296 6.9E-23 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TF3313_0497 78419bfca36d0355968c1dc55c5ed4b7 469 Gene3D G3DSA:3.30.1360.120 1 126 3.6E-45 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 TF3313_0497 78419bfca36d0355968c1dc55c5ed4b7 469 Gene3D G3DSA:3.40.50.300 223 396 9.6E-103 T 11-10-2018 TF3313_0497 78419bfca36d0355968c1dc55c5ed4b7 469 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 225 245 6.0E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TF3313_0497 78419bfca36d0355968c1dc55c5ed4b7 469 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 292 310 6.0E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TF3313_0497 78419bfca36d0355968c1dc55c5ed4b7 469 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 12 469 2.0E-113 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 TF3313_0497 78419bfca36d0355968c1dc55c5ed4b7 469 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 223 361 4.2E-23 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TF3313_0497 78419bfca36d0355968c1dc55c5ed4b7 469 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 469 32.839 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 TF3313_0497 78419bfca36d0355968c1dc55c5ed4b7 469 SUPERFAMILY SSF52540 78 386 2.02E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0497 78419bfca36d0355968c1dc55c5ed4b7 469 Pfam PF01926 50S ribosome-binding GTPase 225 341 5.2E-25 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TF3313_0497 78419bfca36d0355968c1dc55c5ed4b7 469 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 126 7.9E-39 T 11-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 TF3313_0497 78419bfca36d0355968c1dc55c5ed4b7 469 Gene3D G3DSA:1.20.120.430 127 469 9.6E-103 T 11-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 TF3313_0497 78419bfca36d0355968c1dc55c5ed4b7 469 Pfam PF12631 MnmE helical domain 129 466 1.6E-49 T 11-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 TF3313_1123 510f125acca772a39b3fe447ffa12a27 450 Gene3D G3DSA:1.50.10.140 36 450 1.1E-169 T 11-10-2018 TF3313_1123 510f125acca772a39b3fe447ffa12a27 450 Pfam PF10091 Putative glucoamylase 215 435 9.0E-82 T 11-10-2018 IPR019282 Domain of unknown function DUF2329 TF3313_1123 510f125acca772a39b3fe447ffa12a27 450 PIRSF PIRSF028431 1 450 1.2E-147 T 11-10-2018 IPR016883 Uncharacterised conserved protein UCP028431 TF3313_1366 d145db74ba5e72a789e62b577d373a3d 438 Pfam PF00639 PPIC-type PPIASE domain 266 376 7.2E-16 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 TF3313_1366 d145db74ba5e72a789e62b577d373a3d 438 Pfam PF00639 PPIC-type PPIASE domain 165 255 2.4E-20 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 TF3313_1366 d145db74ba5e72a789e62b577d373a3d 438 Gene3D G3DSA:1.10.4030.30 10 274 1.7E-50 T 11-10-2018 TF3313_1366 d145db74ba5e72a789e62b577d373a3d 438 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 194 215 - T 11-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 TF3313_1366 d145db74ba5e72a789e62b577d373a3d 438 SUPERFAMILY SSF54534 259 361 5.69E-13 T 11-10-2018 TF3313_1366 d145db74ba5e72a789e62b577d373a3d 438 SUPERFAMILY SSF109998 9 172 9.02E-18 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily TF3313_1366 d145db74ba5e72a789e62b577d373a3d 438 Gene3D G3DSA:3.10.50.40 155 258 1.7E-50 T 11-10-2018 TF3313_1366 d145db74ba5e72a789e62b577d373a3d 438 SUPERFAMILY SSF54534 153 258 8.5E-24 T 11-10-2018 TF3313_0180 28d147c9132fb08957c57de924abf1a0 667 Gene3D G3DSA:3.40.50.10190 588 667 2.0E-23 T 11-10-2018 IPR036420 BRCT domain superfamily TF3313_0180 28d147c9132fb08957c57de924abf1a0 667 Gene3D G3DSA:1.10.287.610 2 70 3.3E-26 T 11-10-2018 TF3313_0180 28d147c9132fb08957c57de924abf1a0 667 SUPERFAMILY SSF52113 590 665 1.29E-15 T 11-10-2018 IPR036420 BRCT domain superfamily TF3313_0180 28d147c9132fb08957c57de924abf1a0 667 Gene3D G3DSA:1.10.150.20 429 500 1.8E-23 T 11-10-2018 TF3313_0180 28d147c9132fb08957c57de924abf1a0 667 Gene3D G3DSA:2.40.50.140 315 386 1.1E-28 T 11-10-2018 TF3313_0180 28d147c9132fb08957c57de924abf1a0 667 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 5 314 2.0E-115 T 11-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 TF3313_0180 28d147c9132fb08957c57de924abf1a0 667 Gene3D G3DSA:1.10.150.20 501 581 2.1E-27 T 11-10-2018 TF3313_0180 28d147c9132fb08957c57de924abf1a0 667 SMART SM00532 3 445 8.1E-223 T 11-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 TF3313_0180 28d147c9132fb08957c57de924abf1a0 667 Hamap MF_01588 DNA ligase [ligA]. 5 665 46.463 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 TF3313_0180 28d147c9132fb08957c57de924abf1a0 667 SUPERFAMILY SSF47781 401 579 3.22E-55 T 11-10-2018 IPR010994 RuvA domain 2-like TF3313_0180 28d147c9132fb08957c57de924abf1a0 667 SUPERFAMILY SSF50249 314 392 1.46E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TF3313_0180 28d147c9132fb08957c57de924abf1a0 667 Gene3D G3DSA:2.20.70.80 391 426 1.8E-5 T 11-10-2018 TF3313_0180 28d147c9132fb08957c57de924abf1a0 667 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 590 663 1.9E-13 T 11-10-2018 IPR001357 BRCT domain TF3313_0180 28d147c9132fb08957c57de924abf1a0 667 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 404 430 4.6E-8 T 11-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 TF3313_0180 28d147c9132fb08957c57de924abf1a0 667 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 661 2.2E-238 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 TF3313_0180 28d147c9132fb08957c57de924abf1a0 667 PIRSF PIRSF001604 1 667 1.3E-242 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 TF3313_0180 28d147c9132fb08957c57de924abf1a0 667 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 327 342 - T 11-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site TF3313_0180 28d147c9132fb08957c57de924abf1a0 667 SUPERFAMILY SSF56091 3 311 1.39E-109 T 11-10-2018 TF3313_0180 28d147c9132fb08957c57de924abf1a0 667 Pfam PF12826 Helix-hairpin-helix motif 506 569 4.6E-25 T 11-10-2018 TF3313_0180 28d147c9132fb08957c57de924abf1a0 667 SMART SM00292 590 667 1.2E-8 T 11-10-2018 IPR001357 BRCT domain TF3313_0180 28d147c9132fb08957c57de924abf1a0 667 Gene3D G3DSA:3.30.470.90 71 314 3.8E-91 T 11-10-2018 TF3313_0180 28d147c9132fb08957c57de924abf1a0 667 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 317 392 7.5E-33 T 11-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 TF3313_0284 97e7624f371040dbdad7c4e02db641e7 660 Gene3D G3DSA:1.25.40.10 124 317 1.1E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0284 97e7624f371040dbdad7c4e02db641e7 660 SUPERFAMILY SSF158682 572 657 2.35E-6 T 11-10-2018 IPR029024 TerB-like TF3313_0284 97e7624f371040dbdad7c4e02db641e7 660 SUPERFAMILY SSF48452 166 264 1.9E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0709 277599f64b6a4637c087ae90cc6248f6 515 Pfam PF00221 Aromatic amino acid lyase 14 486 2.7E-155 T 11-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 TF3313_0709 277599f64b6a4637c087ae90cc6248f6 515 Gene3D G3DSA:1.20.200.10 199 514 1.9E-89 T 11-10-2018 TF3313_0709 277599f64b6a4637c087ae90cc6248f6 515 Gene3D G3DSA:1.10.275.10 5 198 9.2E-55 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal TF3313_0709 277599f64b6a4637c087ae90cc6248f6 515 SUPERFAMILY SSF48557 5 510 2.75E-155 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 TF3313_1575 c7d210ff7fb560e910cdc05d022bdfba 137 SUPERFAMILY SSF46785 4 129 3.74E-29 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TF3313_1575 c7d210ff7fb560e910cdc05d022bdfba 137 Gene3D G3DSA:3.30.1490.190 84 136 8.2E-10 T 11-10-2018 TF3313_1575 c7d210ff7fb560e910cdc05d022bdfba 137 Gene3D G3DSA:1.10.10.10 1 82 1.9E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_1575 c7d210ff7fb560e910cdc05d022bdfba 137 Pfam PF01475 Ferric uptake regulator family 11 109 3.1E-24 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 TF3313_0523 408bd028e76cf068f26460a9b03296bd 1053 SUPERFAMILY SSF63829 88 366 1.11E-7 T 11-10-2018 TF3313_0523 408bd028e76cf068f26460a9b03296bd 1053 SUPERFAMILY SSF63829 444 653 1.14E-14 T 11-10-2018 TF3313_0523 408bd028e76cf068f26460a9b03296bd 1053 Gene3D G3DSA:2.60.40.10 707 821 2.1E-21 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_0523 408bd028e76cf068f26460a9b03296bd 1053 Pfam PF07730 Histidine kinase 854 919 9.3E-7 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 TF3313_0523 408bd028e76cf068f26460a9b03296bd 1053 Gene3D G3DSA:2.130.10.10 390 556 1.4E-25 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TF3313_0523 408bd028e76cf068f26460a9b03296bd 1053 Gene3D G3DSA:2.130.10.10 53 183 2.5E-21 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TF3313_0523 408bd028e76cf068f26460a9b03296bd 1053 SMART SM00387 962 1053 0.0082 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TF3313_0523 408bd028e76cf068f26460a9b03296bd 1053 Gene3D G3DSA:2.130.10.10 557 706 2.4E-14 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TF3313_0523 408bd028e76cf068f26460a9b03296bd 1053 Pfam PF07494 Two component regulator propeller 534 553 0.0071 T 11-10-2018 IPR011110 Two component regulator propeller TF3313_0523 408bd028e76cf068f26460a9b03296bd 1053 Gene3D G3DSA:2.130.10.10 215 389 2.3E-13 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TF3313_0523 408bd028e76cf068f26460a9b03296bd 1053 Pfam PF07495 Y_Y_Y domain 755 814 7.5E-13 T 11-10-2018 IPR011123 Two component regulator three Y TF3313_0523 408bd028e76cf068f26460a9b03296bd 1053 Gene3D G3DSA:3.30.565.10 933 1051 2.4E-20 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TF3313_0523 408bd028e76cf068f26460a9b03296bd 1053 SUPERFAMILY SSF55874 925 1049 9.43E-13 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TF3313_1478 341ce9e437e3c5e0352bf86e3bd4c70f 271 SMART SM01252 13 140 1.3E-43 T 11-10-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding TF3313_1478 341ce9e437e3c5e0352bf86e3bd4c70f 271 Pfam PF04383 KilA-N domain 7 139 6.8E-27 T 11-10-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding TF3313_2131 5c3d2e81072130a7f61b65919a6dd3bf 305 TIGRFAM TIGR01875 cas_MJ0381: CRISPR-associated autoregulator DevR family 7 233 7.5E-35 T 11-10-2018 IPR010154 CRISPR-associated protein Cas7/Cst2/DevR TF3313_2131 5c3d2e81072130a7f61b65919a6dd3bf 305 Pfam PF01905 CRISPR-associated negative auto-regulator DevR/Csa2 41 204 5.4E-8 T 11-10-2018 IPR010154 CRISPR-associated protein Cas7/Cst2/DevR TF3313_2131 5c3d2e81072130a7f61b65919a6dd3bf 305 TIGRFAM TIGR03489 cas_csp1: CRISPR-associated protein Cas7/Csp1, subtype PGING 11 302 4.3E-188 T 11-10-2018 IPR020032 CRISPR-associated protein Csp1 TF3313_0435 60a5c22b5d167e574671e69ebb3ad2a0 445 Pfam PF00206 Lyase 30 303 2.5E-50 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal TF3313_0435 60a5c22b5d167e574671e69ebb3ad2a0 445 Gene3D G3DSA:1.10.275.10 31 231 5.6E-111 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal TF3313_0435 60a5c22b5d167e574671e69ebb3ad2a0 445 PRINTS PR00149 Fumarate lyase superfamily signature 104 122 1.5E-16 T 11-10-2018 IPR000362 Fumarate lyase family TF3313_0435 60a5c22b5d167e574671e69ebb3ad2a0 445 PRINTS PR00149 Fumarate lyase superfamily signature 278 294 1.5E-16 T 11-10-2018 IPR000362 Fumarate lyase family TF3313_0435 60a5c22b5d167e574671e69ebb3ad2a0 445 PRINTS PR00149 Fumarate lyase superfamily signature 149 167 1.5E-16 T 11-10-2018 IPR000362 Fumarate lyase family TF3313_0435 60a5c22b5d167e574671e69ebb3ad2a0 445 Gene3D G3DSA:1.10.40.30 363 393 5.6E-111 T 11-10-2018 TF3313_0435 60a5c22b5d167e574671e69ebb3ad2a0 445 Hamap MF_00006 Argininosuccinate lyase [argH]. 4 429 29.494 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 TF3313_0435 60a5c22b5d167e574671e69ebb3ad2a0 445 TIGRFAM TIGR00838 argH: argininosuccinate lyase 12 394 4.0E-103 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 TF3313_0435 60a5c22b5d167e574671e69ebb3ad2a0 445 ProSitePatterns PS00163 Fumarate lyases signature. 278 287 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 TF3313_0435 60a5c22b5d167e574671e69ebb3ad2a0 445 SUPERFAMILY SSF48557 11 391 9.11E-97 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 TF3313_0435 60a5c22b5d167e574671e69ebb3ad2a0 445 PRINTS PR00145 Argininosuccinate lyase family signature 195 211 8.5E-32 T 11-10-2018 TF3313_0435 60a5c22b5d167e574671e69ebb3ad2a0 445 PRINTS PR00145 Argininosuccinate lyase family signature 313 332 8.5E-32 T 11-10-2018 TF3313_0435 60a5c22b5d167e574671e69ebb3ad2a0 445 PRINTS PR00145 Argininosuccinate lyase family signature 103 125 8.5E-32 T 11-10-2018 TF3313_0435 60a5c22b5d167e574671e69ebb3ad2a0 445 PRINTS PR00145 Argininosuccinate lyase family signature 278 294 8.5E-32 T 11-10-2018 TF3313_0435 60a5c22b5d167e574671e69ebb3ad2a0 445 PRINTS PR00145 Argininosuccinate lyase family signature 144 164 8.5E-32 T 11-10-2018 TF3313_0435 60a5c22b5d167e574671e69ebb3ad2a0 445 Gene3D G3DSA:1.20.200.10 121 362 5.6E-111 T 11-10-2018 TF3313_1502 eb26879c610c65c61f3c6fd56cd76aed 878 Pfam PF08264 Anticodon-binding domain of tRNA 623 765 2.9E-30 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 TF3313_1502 eb26879c610c65c61f3c6fd56cd76aed 878 Gene3D G3DSA:3.90.740.10 175 341 3.4E-273 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TF3313_1502 eb26879c610c65c61f3c6fd56cd76aed 878 SUPERFAMILY SSF47323 595 830 3.92E-41 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_1502 eb26879c610c65c61f3c6fd56cd76aed 878 TIGRFAM TIGR00422 valS: valine--tRNA ligase 4 864 2.5E-273 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TF3313_1502 eb26879c610c65c61f3c6fd56cd76aed 878 Gene3D G3DSA:1.10.287.380 810 877 5.8E-11 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 TF3313_1502 eb26879c610c65c61f3c6fd56cd76aed 878 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 817 872 2.7E-7 T 11-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 TF3313_1502 eb26879c610c65c61f3c6fd56cd76aed 878 SUPERFAMILY SSF46589 817 872 7.85E-11 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 TF3313_1502 eb26879c610c65c61f3c6fd56cd76aed 878 SUPERFAMILY SSF52374 3 593 6.52E-122 T 11-10-2018 TF3313_1502 eb26879c610c65c61f3c6fd56cd76aed 878 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 582 1.3E-183 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_1502 eb26879c610c65c61f3c6fd56cd76aed 878 Gene3D G3DSA:3.40.50.620 23 544 3.4E-273 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_1502 eb26879c610c65c61f3c6fd56cd76aed 878 Hamap MF_02004 Valine--tRNA ligase [valS]. 3 878 14.095 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TF3313_1502 eb26879c610c65c61f3c6fd56cd76aed 878 Gene3D G3DSA:1.10.730.10 4 752 3.4E-273 T 11-10-2018 TF3313_1502 eb26879c610c65c61f3c6fd56cd76aed 878 SUPERFAMILY SSF50677 191 340 1.96E-54 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TF3313_1502 eb26879c610c65c61f3c6fd56cd76aed 878 PRINTS PR00986 Valyl-tRNA synthetase signature 36 47 1.3E-26 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TF3313_1502 eb26879c610c65c61f3c6fd56cd76aed 878 PRINTS PR00986 Valyl-tRNA synthetase signature 462 483 1.3E-26 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TF3313_1502 eb26879c610c65c61f3c6fd56cd76aed 878 PRINTS PR00986 Valyl-tRNA synthetase signature 495 513 1.3E-26 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TF3313_1502 eb26879c610c65c61f3c6fd56cd76aed 878 PRINTS PR00986 Valyl-tRNA synthetase signature 230 247 1.3E-26 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TF3313_1502 eb26879c610c65c61f3c6fd56cd76aed 878 PRINTS PR00986 Valyl-tRNA synthetase signature 345 358 1.3E-26 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TF3313_1502 eb26879c610c65c61f3c6fd56cd76aed 878 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_1256 4a8e33059516d5f5d541952bdacf7a45 370 SMART SM00937 68 183 5.0E-58 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 TF3313_1256 4a8e33059516d5f5d541952bdacf7a45 370 Gene3D G3DSA:3.30.160.20 215 309 3.9E-84 T 11-10-2018 TF3313_1256 4a8e33059516d5f5d541952bdacf7a45 370 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 7 369 36.149 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 TF3313_1256 4a8e33059516d5f5d541952bdacf7a45 370 Pfam PF00472 RF-1 domain 216 333 1.4E-33 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 TF3313_1256 4a8e33059516d5f5d541952bdacf7a45 370 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 5 366 1.9E-137 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 TF3313_1256 4a8e33059516d5f5d541952bdacf7a45 370 Gene3D G3DSA:3.30.70.1660 117 354 3.9E-84 T 11-10-2018 TF3313_1256 4a8e33059516d5f5d541952bdacf7a45 370 Pfam PF03462 PCRF domain 16 208 1.2E-70 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 TF3313_1256 4a8e33059516d5f5d541952bdacf7a45 370 SUPERFAMILY SSF75620 14 365 2.22E-115 T 11-10-2018 TF3313_1256 4a8e33059516d5f5d541952bdacf7a45 370 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 232 248 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 TF3313_2717 0b7042e09be87bf5315da50d23926062 220 Gene3D G3DSA:2.40.240.10 3 69 1.3E-7 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TF3313_2717 0b7042e09be87bf5315da50d23926062 220 Pfam PF01386 Ribosomal L25p family 6 116 8.6E-23 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 TF3313_2717 0b7042e09be87bf5315da50d23926062 220 SUPERFAMILY SSF50715 10 205 7.98E-42 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TF3313_2717 0b7042e09be87bf5315da50d23926062 220 Gene3D G3DSA:2.170.120.20 121 212 1.6E-21 T 11-10-2018 IPR037121 Ribosomal protein L25, C-terminal TF3313_2717 0b7042e09be87bf5315da50d23926062 220 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 206 22.006 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 TF3313_2717 0b7042e09be87bf5315da50d23926062 220 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 11 119 8.0E-15 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 TF3313_2717 0b7042e09be87bf5315da50d23926062 220 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 72 202 5.5E-28 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 TF3313_2717 0b7042e09be87bf5315da50d23926062 220 Gene3D G3DSA:2.40.240.10 70 119 4.9E-6 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TF3313_2717 0b7042e09be87bf5315da50d23926062 220 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 124 205 7.6E-22 T 11-10-2018 IPR020057 Ribosomal protein L25, beta domain TF3313_2921 fb9cb251872f7ae8d186c42652f5be2c 187 Pfam PF00881 Nitroreductase family 91 152 2.4E-7 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 TF3313_2921 fb9cb251872f7ae8d186c42652f5be2c 187 Pfam PF00881 Nitroreductase family 8 61 5.1E-14 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 TF3313_2921 fb9cb251872f7ae8d186c42652f5be2c 187 SUPERFAMILY SSF55469 1 164 2.36E-39 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TF3313_2921 fb9cb251872f7ae8d186c42652f5be2c 187 Gene3D G3DSA:3.40.109.10 6 175 4.4E-42 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TF3313_0156 93af9025b44116d612999e3b900ea714 193 SUPERFAMILY SSF88946 3 98 9.42E-17 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_0156 93af9025b44116d612999e3b900ea714 193 Gene3D G3DSA:1.10.1740.10 1 98 2.0E-14 T 11-10-2018 TF3313_0156 93af9025b44116d612999e3b900ea714 193 Gene3D G3DSA:1.10.10.10 99 179 5.5E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_0156 93af9025b44116d612999e3b900ea714 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 175 3.9E-25 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TF3313_0156 93af9025b44116d612999e3b900ea714 193 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 17 175 3.5E-45 T 11-10-2018 IPR014327 RNA polymerase sigma-70, Bacteroidetes type TF3313_0156 93af9025b44116d612999e3b900ea714 193 Pfam PF04542 Sigma-70 region 2 23 88 6.6E-6 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_0156 93af9025b44116d612999e3b900ea714 193 Pfam PF08281 Sigma-70, region 4 120 170 2.4E-14 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TF3313_0156 93af9025b44116d612999e3b900ea714 193 SUPERFAMILY SSF88659 120 178 2.83E-12 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TF3313_0790 8f12e9af304795b64aff7be82b10f1c9 495 SMART SM00917 366 494 4.0E-24 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TF3313_0790 8f12e9af304795b64aff7be82b10f1c9 495 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 3 491 9.5E-196 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TF3313_0790 8f12e9af304795b64aff7be82b10f1c9 495 Pfam PF08502 LeuA allosteric (dimerisation) domain 367 493 4.0E-27 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TF3313_0790 8f12e9af304795b64aff7be82b10f1c9 495 SUPERFAMILY SSF51569 2 288 1.54E-93 T 11-10-2018 TF3313_0790 8f12e9af304795b64aff7be82b10f1c9 495 Pfam PF00682 HMGL-like 4 270 1.2E-93 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 TF3313_0790 8f12e9af304795b64aff7be82b10f1c9 495 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 1 495 39.254 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TF3313_0790 8f12e9af304795b64aff7be82b10f1c9 495 Gene3D G3DSA:1.10.238.260 277 385 8.5E-33 T 11-10-2018 TF3313_0790 8f12e9af304795b64aff7be82b10f1c9 495 Gene3D G3DSA:3.30.160.270 386 494 4.7E-11 T 11-10-2018 TF3313_0790 8f12e9af304795b64aff7be82b10f1c9 495 SUPERFAMILY SSF110921 392 492 9.81E-18 T 11-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TF3313_0790 8f12e9af304795b64aff7be82b10f1c9 495 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 11 27 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TF3313_0790 8f12e9af304795b64aff7be82b10f1c9 495 Gene3D G3DSA:3.20.20.70 1 274 1.3E-105 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_1612 5bb798aaf8a8081831fd519d1595a1e5 619 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 13 611 5.7E-207 T 11-10-2018 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969 TF3313_1612 5bb798aaf8a8081831fd519d1595a1e5 619 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 516 591 5.2E-9 T 11-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II TF3313_1612 5bb798aaf8a8081831fd519d1595a1e5 619 Gene3D G3DSA:3.40.50.920 505 618 1.3E-24 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TF3313_1612 5bb798aaf8a8081831fd519d1595a1e5 619 Gene3D G3DSA:3.40.50.970 224 423 1.7E-60 T 11-10-2018 TF3313_1612 5bb798aaf8a8081831fd519d1595a1e5 619 Gene3D G3DSA:3.40.920.10 11 223 1.9E-18 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 TF3313_1612 5bb798aaf8a8081831fd519d1595a1e5 619 SUPERFAMILY SSF52922 508 617 2.36E-16 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TF3313_1612 5bb798aaf8a8081831fd519d1595a1e5 619 SUPERFAMILY SSF53323 15 215 1.7E-17 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 TF3313_1612 5bb798aaf8a8081831fd519d1595a1e5 619 SUPERFAMILY SSF52518 237 499 1.83E-58 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold TF3313_1612 5bb798aaf8a8081831fd519d1595a1e5 619 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 21 211 7.6E-31 T 11-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 TF3313_1612 5bb798aaf8a8081831fd519d1595a1e5 619 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 261 475 1.9E-53 T 11-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 TF3313_2565 24a424ff82c9446ddadc247ed0409bb1 193 SUPERFAMILY SSF48317 5 182 1.83E-29 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily TF3313_2565 24a424ff82c9446ddadc247ed0409bb1 193 SMART SM00014 61 174 3.8E-15 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase TF3313_2565 24a424ff82c9446ddadc247ed0409bb1 193 Pfam PF01569 PAP2 superfamily 64 180 3.4E-22 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase TF3313_2565 24a424ff82c9446ddadc247ed0409bb1 193 Gene3D G3DSA:1.20.144.10 92 192 1.3E-21 T 11-10-2018 TF3313_2309 af5f9cd8942de2e924f4e1e8585649ec 373 Pfam PF07676 WD40-like Beta Propeller Repeat 180 198 0.03 T 11-10-2018 IPR011659 WD40-like Beta Propeller TF3313_2309 af5f9cd8942de2e924f4e1e8585649ec 373 Pfam PF07676 WD40-like Beta Propeller Repeat 314 342 7.9E-5 T 11-10-2018 IPR011659 WD40-like Beta Propeller TF3313_2309 af5f9cd8942de2e924f4e1e8585649ec 373 Pfam PF07676 WD40-like Beta Propeller Repeat 281 305 0.0065 T 11-10-2018 IPR011659 WD40-like Beta Propeller TF3313_2309 af5f9cd8942de2e924f4e1e8585649ec 373 Pfam PF07676 WD40-like Beta Propeller Repeat 225 251 0.09 T 11-10-2018 IPR011659 WD40-like Beta Propeller TF3313_2309 af5f9cd8942de2e924f4e1e8585649ec 373 Gene3D G3DSA:2.120.10.30 156 278 5.8E-21 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TF3313_2309 af5f9cd8942de2e924f4e1e8585649ec 373 Gene3D G3DSA:2.120.10.30 279 371 1.2E-25 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TF3313_2309 af5f9cd8942de2e924f4e1e8585649ec 373 Gene3D G3DSA:2.120.10.30 26 155 3.7E-10 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TF3313_2309 af5f9cd8942de2e924f4e1e8585649ec 373 SUPERFAMILY SSF82171 50 365 3.53E-40 T 11-10-2018 TF3313_0815 4b60ad96edeada24c1b63911f8c97b50 223 SUPERFAMILY SSF144091 2 136 1.7E-19 T 11-10-2018 TF3313_0815 4b60ad96edeada24c1b63911f8c97b50 223 Gene3D G3DSA:1.20.1540.10 1 134 2.4E-15 T 11-10-2018 IPR035952 Rhomboid-like superfamily TF3313_0815 4b60ad96edeada24c1b63911f8c97b50 223 Pfam PF01694 Rhomboid family 2 134 2.0E-17 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 TF3313_1884 59ade23da931d7fae2bbc5949a9017fd 249 Gene3D G3DSA:3.40.50.2300 1 131 4.6E-22 T 11-10-2018 TF3313_1884 59ade23da931d7fae2bbc5949a9017fd 249 SMART SM00448 1 111 5.5E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TF3313_1884 59ade23da931d7fae2bbc5949a9017fd 249 SUPERFAMILY SSF52172 1 119 1.71E-24 T 11-10-2018 IPR011006 CheY-like superfamily TF3313_1884 59ade23da931d7fae2bbc5949a9017fd 249 Gene3D G3DSA:2.40.50.40 140 208 4.2E-7 T 11-10-2018 TF3313_1884 59ade23da931d7fae2bbc5949a9017fd 249 SMART SM00850 148 248 8.4E-21 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 TF3313_1884 59ade23da931d7fae2bbc5949a9017fd 249 Pfam PF00072 Response regulator receiver domain 3 112 3.1E-16 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TF3313_1884 59ade23da931d7fae2bbc5949a9017fd 249 Pfam PF04397 LytTr DNA-binding domain 149 247 2.4E-17 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 TF3313_2229 032dd6b6427333f28d4fda8dadeacb8f 374 SUPERFAMILY SSF52540 3 245 2.43E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2229 032dd6b6427333f28d4fda8dadeacb8f 374 Pfam PF13177 DNA polymerase III, delta subunit 8 209 2.2E-41 T 11-10-2018 TF3313_1904 86ae6fbc5ff4bbf392dd3cc80780bf93 108 Pfam PF09919 Uncharacterized conserved protein (DUF2149) 15 108 1.7E-33 T 11-10-2018 IPR018676 Protein of unknown function DUF2149 TF3313_1294 8596efd0bc897b187e2f066cf7d11123 367 Gene3D G3DSA:1.10.150.300 113 202 4.0E-151 T 11-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 TF3313_1294 8596efd0bc897b187e2f066cf7d11123 367 Gene3D G3DSA:3.40.50.300 3 282 4.0E-151 T 11-10-2018 TF3313_1294 8596efd0bc897b187e2f066cf7d11123 367 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 367 9.9E-152 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 TF3313_1294 8596efd0bc897b187e2f066cf7d11123 367 SUPERFAMILY SSF52540 3 305 1.67E-80 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1294 8596efd0bc897b187e2f066cf7d11123 367 SUPERFAMILY SSF81271 283 364 1.0E-36 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 TF3313_1294 8596efd0bc897b187e2f066cf7d11123 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 1.3E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TF3313_1294 8596efd0bc897b187e2f066cf7d11123 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 1.3E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TF3313_1294 8596efd0bc897b187e2f066cf7d11123 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.3E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TF3313_1294 8596efd0bc897b187e2f066cf7d11123 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 1.3E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TF3313_1294 8596efd0bc897b187e2f066cf7d11123 367 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 367 44.194 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 TF3313_1294 8596efd0bc897b187e2f066cf7d11123 367 Pfam PF01926 50S ribosome-binding GTPase 5 122 1.4E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TF3313_1294 8596efd0bc897b187e2f066cf7d11123 367 PIRSF PIRSF006641 1 367 1.2E-160 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 TF3313_1294 8596efd0bc897b187e2f066cf7d11123 367 Gene3D G3DSA:3.10.20.30 48 365 4.0E-151 T 11-10-2018 IPR012675 Beta-grasp domain superfamily TF3313_1294 8596efd0bc897b187e2f066cf7d11123 367 Pfam PF06071 Protein of unknown function (DUF933) 283 366 5.2E-41 T 11-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 TF3313_1063 0a0daae09b4a5b4b1dfb53949fd155bf 321 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 82 100 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 TF3313_1063 0a0daae09b4a5b4b1dfb53949fd155bf 321 PIRSF PIRSF006621 1 317 5.3E-104 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 TF3313_1063 0a0daae09b4a5b4b1dfb53949fd155bf 321 Pfam PF01207 Dihydrouridine synthase (Dus) 1 284 5.3E-87 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 TF3313_1063 0a0daae09b4a5b4b1dfb53949fd155bf 321 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 1 311 9.6E-96 T 11-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 TF3313_1063 0a0daae09b4a5b4b1dfb53949fd155bf 321 Gene3D G3DSA:3.20.20.70 1 238 2.6E-82 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_1063 0a0daae09b4a5b4b1dfb53949fd155bf 321 SUPERFAMILY SSF51395 1 307 9.89E-81 T 11-10-2018 TF3313_1767 88fd05b80bfa40f21b9c74ccfd64377c 426 PIRSF PIRSF000412 1 425 1.5E-160 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 TF3313_1767 88fd05b80bfa40f21b9c74ccfd64377c 426 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 1 425 50.327 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 TF3313_1767 88fd05b80bfa40f21b9c74ccfd64377c 426 SUPERFAMILY SSF53383 2 424 1.53E-167 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TF3313_1767 88fd05b80bfa40f21b9c74ccfd64377c 426 Pfam PF00464 Serine hydroxymethyltransferase 3 394 5.0E-170 T 11-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 TF3313_1767 88fd05b80bfa40f21b9c74ccfd64377c 426 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 214 230 - T 11-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 TF3313_1767 88fd05b80bfa40f21b9c74ccfd64377c 426 Gene3D G3DSA:3.40.640.10 29 295 4.6E-176 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TF3313_1767 88fd05b80bfa40f21b9c74ccfd64377c 426 Gene3D G3DSA:3.90.1150.10 3 403 4.6E-176 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TF3313_2061 5c3078144575f17b04932b1e4fdf58d3 389 Gene3D G3DSA:3.90.70.10 12 389 4.1E-144 T 11-10-2018 TF3313_2061 5c3078144575f17b04932b1e4fdf58d3 389 SUPERFAMILY SSF54001 27 388 2.07E-45 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TF3313_2061 5c3078144575f17b04932b1e4fdf58d3 389 Pfam PF00112 Papain family cysteine protease 28 69 1.4E-5 T 11-10-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 TF3313_2061 5c3078144575f17b04932b1e4fdf58d3 389 Pfam PF03051 Peptidase C1-like family 89 263 3.8E-5 T 11-10-2018 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 Reactome: R-HSA-983168 TF3313_2061 5c3078144575f17b04932b1e4fdf58d3 389 Pfam PF03051 Peptidase C1-like family 319 385 2.6E-7 T 11-10-2018 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 Reactome: R-HSA-983168 TF3313_2061 5c3078144575f17b04932b1e4fdf58d3 389 ProSitePatterns PS00139 Eukaryotic thiol (cysteine) proteases cysteine active site. 37 48 - T 11-10-2018 IPR000169 Cysteine peptidase, cysteine active site TF3313_2061 5c3078144575f17b04932b1e4fdf58d3 389 PIRSF PIRSF005700 4 389 1.0E-51 T 11-10-2018 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 Reactome: R-HSA-983168 TF3313_1936 c9ba097fe7eef8819497226a5c01e8f0 753 Pfam PF02080 TrkA-C domain 591 659 6.9E-15 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TF3313_1936 c9ba097fe7eef8819497226a5c01e8f0 753 Pfam PF02080 TrkA-C domain 683 747 4.8E-15 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TF3313_1936 c9ba097fe7eef8819497226a5c01e8f0 753 Gene3D G3DSA:1.20.1530.20 5 384 1.5E-84 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily TF3313_1936 c9ba097fe7eef8819497226a5c01e8f0 753 SUPERFAMILY SSF116726 582 660 1.7E-18 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TF3313_1936 c9ba097fe7eef8819497226a5c01e8f0 753 Pfam PF00999 Sodium/hydrogen exchanger family 11 376 8.0E-64 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 TF3313_1936 c9ba097fe7eef8819497226a5c01e8f0 753 Gene3D G3DSA:3.30.70.1450 589 663 3.2E-18 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TF3313_1936 c9ba097fe7eef8819497226a5c01e8f0 753 Gene3D G3DSA:3.30.70.1450 679 750 3.7E-17 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TF3313_1936 c9ba097fe7eef8819497226a5c01e8f0 753 SUPERFAMILY SSF116726 673 748 1.44E-16 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TF3313_2414 63c6975ea4fe953cf6073c790e4de338 193 PIRSF PIRSF006102 1 193 6.0E-75 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 TF3313_2414 63c6975ea4fe953cf6073c790e4de338 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 3 185 3.2E-68 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 TF3313_2414 63c6975ea4fe953cf6073c790e4de338 193 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 5 192 1.4E-84 T 11-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 TF3313_2414 63c6975ea4fe953cf6073c790e4de338 193 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 193 26.088 T 11-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 TF3313_0030 e883451d35bf89fbc6b17351da838383 833 Pfam PF02927 Cellulase N-terminal ig-like domain 19 102 6.1E-23 T 11-10-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 TF3313_0030 e883451d35bf89fbc6b17351da838383 833 Pfam PF00759 Glycosyl hydrolase family 9 113 583 5.6E-67 T 11-10-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 TF3313_0030 e883451d35bf89fbc6b17351da838383 833 Pfam PF01522 Polysaccharide deacetylase 619 735 6.2E-8 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 TF3313_0030 e883451d35bf89fbc6b17351da838383 833 SUPERFAMILY SSF81296 15 108 7.0E-16 T 11-10-2018 IPR014756 Immunoglobulin E-set TF3313_0030 e883451d35bf89fbc6b17351da838383 833 Gene3D G3DSA:2.60.40.10 21 110 1.4E-18 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_0030 e883451d35bf89fbc6b17351da838383 833 SUPERFAMILY SSF88713 587 820 1.45E-26 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 TF3313_0030 e883451d35bf89fbc6b17351da838383 833 SUPERFAMILY SSF48208 111 587 2.27E-76 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 TF3313_0030 e883451d35bf89fbc6b17351da838383 833 Gene3D G3DSA:1.50.10.10 111 587 5.2E-92 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 TF3313_0030 e883451d35bf89fbc6b17351da838383 833 Gene3D G3DSA:3.20.20.370 588 828 2.9E-27 T 11-10-2018 TF3313_0981 eb799d0842009d23a3ea77a0d719b047 373 Gene3D G3DSA:1.10.3290.10 52 297 4.6E-53 T 11-10-2018 IPR036597 Fido-like domain superfamily TF3313_0981 eb799d0842009d23a3ea77a0d719b047 373 SUPERFAMILY SSF140931 100 292 4.58E-46 T 11-10-2018 IPR036597 Fido-like domain superfamily TF3313_0981 eb799d0842009d23a3ea77a0d719b047 373 Pfam PF13784 Fic/DOC family N-terminal 36 115 2.2E-19 T 11-10-2018 IPR025758 Fic/DOC N-terminal TF3313_0981 eb799d0842009d23a3ea77a0d719b047 373 Pfam PF02661 Fic/DOC family 121 226 1.8E-21 T 11-10-2018 IPR003812 Fido domain TF3313_0981 eb799d0842009d23a3ea77a0d719b047 373 PIRSF PIRSF038925 11 373 6.1E-109 T 11-10-2018 IPR026287 Adenosine monophosphate-protein transferase TF3313_1335 eba9da751117060352f93ea8ea883965 295 Pfam PF16344 Domain of unknown function (DUF4974) 186 281 2.2E-20 T 11-10-2018 IPR032508 Protein FecR, C-terminal TF3313_1335 eba9da751117060352f93ea8ea883965 295 Gene3D G3DSA:2.60.120.1440 64 210 2.4E-39 T 11-10-2018 TF3313_1335 eba9da751117060352f93ea8ea883965 295 PIRSF PIRSF018266 2 289 3.8E-64 T 11-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component TF3313_1335 eba9da751117060352f93ea8ea883965 295 Pfam PF04773 FecR protein 78 172 3.0E-16 T 11-10-2018 IPR006860 FecR protein TF3313_1335 eba9da751117060352f93ea8ea883965 295 Gene3D G3DSA:3.55.50.30 213 287 1.0E-16 T 11-10-2018 TF3313_2756 1c5d2546674b653bba997454b1770d93 1027 Gene3D G3DSA:3.30.70.1440 667 865 1.9E-279 T 11-10-2018 TF3313_2756 1c5d2546674b653bba997454b1770d93 1027 Pfam PF00873 AcrB/AcrD/AcrF family 5 1022 2.1E-265 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_2756 1c5d2546674b653bba997454b1770d93 1027 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 7.4E-29 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_2756 1c5d2546674b653bba997454b1770d93 1027 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 7.4E-29 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_2756 1c5d2546674b653bba997454b1770d93 1027 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 7.4E-29 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_2756 1c5d2546674b653bba997454b1770d93 1027 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 7.4E-29 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_2756 1c5d2546674b653bba997454b1770d93 1027 PRINTS PR00702 Acriflavin resistance protein family signature 360 381 7.4E-29 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_2756 1c5d2546674b653bba997454b1770d93 1027 PRINTS PR00702 Acriflavin resistance protein family signature 550 567 7.4E-29 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_2756 1c5d2546674b653bba997454b1770d93 1027 SUPERFAMILY SSF82866 298 500 1.12E-38 T 11-10-2018 TF3313_2756 1c5d2546674b653bba997454b1770d93 1027 Gene3D G3DSA:1.20.1640.10 14 506 1.9E-279 T 11-10-2018 TF3313_2756 1c5d2546674b653bba997454b1770d93 1027 Gene3D G3DSA:3.30.70.1430 42 813 1.9E-279 T 11-10-2018 TF3313_2756 1c5d2546674b653bba997454b1770d93 1027 SUPERFAMILY SSF82866 802 1024 7.72E-48 T 11-10-2018 TF3313_2756 1c5d2546674b653bba997454b1770d93 1027 Gene3D G3DSA:3.30.2090.10 181 274 1.9E-279 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TF3313_2756 1c5d2546674b653bba997454b1770d93 1027 SUPERFAMILY SSF82714 184 266 2.49E-12 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TF3313_2756 1c5d2546674b653bba997454b1770d93 1027 Gene3D G3DSA:3.30.70.1320 136 328 1.9E-279 T 11-10-2018 TF3313_2756 1c5d2546674b653bba997454b1770d93 1027 SUPERFAMILY SSF82714 716 798 2.62E-12 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TF3313_2756 1c5d2546674b653bba997454b1770d93 1027 SUPERFAMILY SSF82693 43 130 2.98E-22 T 11-10-2018 TF3313_2756 1c5d2546674b653bba997454b1770d93 1027 SUPERFAMILY SSF82693 140 320 3.14E-15 T 11-10-2018 TF3313_2756 1c5d2546674b653bba997454b1770d93 1027 Gene3D G3DSA:3.30.2090.10 718 805 1.9E-279 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TF3313_2756 1c5d2546674b653bba997454b1770d93 1027 Gene3D G3DSA:1.20.1640.10 507 1019 1.9E-279 T 11-10-2018 TF3313_2756 1c5d2546674b653bba997454b1770d93 1027 Gene3D G3DSA:3.30.70.1430 568 666 1.9E-279 T 11-10-2018 TF3313_2756 1c5d2546674b653bba997454b1770d93 1027 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1025 4.1E-238 T 11-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 Gene3D G3DSA:3.30.230.10 231 409 2.5E-70 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 13 648 1.2E-285 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 Gene3D G3DSA:3.40.50.670 412 652 2.4E-102 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 Pfam PF00204 DNA gyrase B 233 402 1.3E-61 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 SUPERFAMILY SSF56719 406 645 1.33E-86 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 SMART SM00387 38 182 8.4E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 SUPERFAMILY SSF54211 233 403 1.31E-60 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 Pfam PF01751 Toprim domain 431 540 2.9E-19 T 11-10-2018 IPR006171 TOPRIM domain TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 PRINTS PR00418 DNA topoisomerase II family signature 585 601 2.5E-65 T 11-10-2018 TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 PRINTS PR00418 DNA topoisomerase II family signature 77 90 2.5E-65 T 11-10-2018 TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 PRINTS PR00418 DNA topoisomerase II family signature 432 446 2.5E-65 T 11-10-2018 TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 PRINTS PR00418 DNA topoisomerase II family signature 120 134 2.5E-65 T 11-10-2018 TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 PRINTS PR00418 DNA topoisomerase II family signature 541 553 2.5E-65 T 11-10-2018 TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 PRINTS PR00418 DNA topoisomerase II family signature 503 519 2.5E-65 T 11-10-2018 TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 PRINTS PR00418 DNA topoisomerase II family signature 521 538 2.5E-65 T 11-10-2018 TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 PRINTS PR00418 DNA topoisomerase II family signature 42 57 2.5E-65 T 11-10-2018 TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 PRINTS PR00418 DNA topoisomerase II family signature 280 293 2.5E-65 T 11-10-2018 TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 SUPERFAMILY SSF55874 13 219 4.45E-71 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 PRINTS PR01159 DNA gyrase subunit B signature 372 386 2.0E-62 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 PRINTS PR01159 DNA gyrase subunit B signature 482 491 2.0E-62 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 PRINTS PR01159 DNA gyrase subunit B signature 324 340 2.0E-62 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 PRINTS PR01159 DNA gyrase subunit B signature 606 618 2.0E-62 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 PRINTS PR01159 DNA gyrase subunit B signature 13 23 2.0E-62 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 PRINTS PR01159 DNA gyrase subunit B signature 187 202 2.0E-62 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 PRINTS PR01159 DNA gyrase subunit B signature 232 254 2.0E-62 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 PRINTS PR01159 DNA gyrase subunit B signature 386 406 2.0E-62 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 PRINTS PR01159 DNA gyrase subunit B signature 202 215 2.0E-62 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 PRINTS PR01159 DNA gyrase subunit B signature 622 638 2.0E-62 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 581 642 7.3E-28 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 SMART SM00433 42 646 0.0 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 40 180 1.8E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 ProSitePatterns PS00177 DNA topoisomerase II signature. 434 442 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 10 652 85.93 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TF3313_1549 840f1135d8a05e8b42d5d98f30793d82 652 Gene3D G3DSA:3.30.565.10 9 226 3.1E-90 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TF3313_2689 0625254df58760582a6c9b41b361d298 452 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 320 6.4E-72 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TF3313_2689 0625254df58760582a6c9b41b361d298 452 Gene3D G3DSA:3.50.50.60 4 324 7.8E-106 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TF3313_2689 0625254df58760582a6c9b41b361d298 452 PIRSF PIRSF000350 1 452 1.7E-91 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 TF3313_2689 0625254df58760582a6c9b41b361d298 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 273 9.2E-35 T 11-10-2018 TF3313_2689 0625254df58760582a6c9b41b361d298 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 9.2E-35 T 11-10-2018 TF3313_2689 0625254df58760582a6c9b41b361d298 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 285 307 9.2E-35 T 11-10-2018 TF3313_2689 0625254df58760582a6c9b41b361d298 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 9.2E-35 T 11-10-2018 TF3313_2689 0625254df58760582a6c9b41b361d298 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 9.2E-35 T 11-10-2018 TF3313_2689 0625254df58760582a6c9b41b361d298 452 Gene3D G3DSA:3.50.50.60 144 264 7.8E-106 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TF3313_2689 0625254df58760582a6c9b41b361d298 452 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 2 448 6.6E-150 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 TF3313_2689 0625254df58760582a6c9b41b361d298 452 SUPERFAMILY SSF51905 2 362 5.18E-59 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TF3313_2689 0625254df58760582a6c9b41b361d298 452 SUPERFAMILY SSF55424 336 449 1.72E-33 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TF3313_2689 0625254df58760582a6c9b41b361d298 452 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 36 46 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 TF3313_2689 0625254df58760582a6c9b41b361d298 452 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 446 1.4E-30 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 TF3313_2689 0625254df58760582a6c9b41b361d298 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 198 4.4E-67 T 11-10-2018 TF3313_2689 0625254df58760582a6c9b41b361d298 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 4.4E-67 T 11-10-2018 TF3313_2689 0625254df58760582a6c9b41b361d298 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 300 307 4.4E-67 T 11-10-2018 TF3313_2689 0625254df58760582a6c9b41b361d298 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 4.4E-67 T 11-10-2018 TF3313_2689 0625254df58760582a6c9b41b361d298 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 258 272 4.4E-67 T 11-10-2018 TF3313_2689 0625254df58760582a6c9b41b361d298 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 4.4E-67 T 11-10-2018 TF3313_2689 0625254df58760582a6c9b41b361d298 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 422 442 4.4E-67 T 11-10-2018 TF3313_2689 0625254df58760582a6c9b41b361d298 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 35 50 4.4E-67 T 11-10-2018 TF3313_2689 0625254df58760582a6c9b41b361d298 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 400 415 4.4E-67 T 11-10-2018 TF3313_2689 0625254df58760582a6c9b41b361d298 452 Gene3D G3DSA:3.30.390.30 336 452 3.5E-35 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TF3313_0244 9cf9cbe834b9257b4847dd13440a6ea2 62 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 62 1.3E-18 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_0244 9cf9cbe834b9257b4847dd13440a6ea2 62 Pfam PF00471 Ribosomal protein L33 10 62 4.9E-21 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_0244 9cf9cbe834b9257b4847dd13440a6ea2 62 Gene3D G3DSA:2.20.28.120 3 62 2.9E-25 T 11-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_0244 9cf9cbe834b9257b4847dd13440a6ea2 62 SUPERFAMILY SSF57829 4 62 6.71E-17 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 TF3313_0244 9cf9cbe834b9257b4847dd13440a6ea2 62 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 8 62 15.449 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_0403 6dc7f5a449626218ee9408a8edaa0b3b 411 Gene3D G3DSA:1.10.443.10 223 406 1.7E-25 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TF3313_0403 6dc7f5a449626218ee9408a8edaa0b3b 411 SUPERFAMILY SSF56349 120 394 4.41E-41 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TF3313_0403 6dc7f5a449626218ee9408a8edaa0b3b 411 Pfam PF13102 Phage integrase SAM-like domain 109 213 2.2E-18 T 11-10-2018 IPR025269 Phage integrase SAM-like domain TF3313_0403 6dc7f5a449626218ee9408a8edaa0b3b 411 Pfam PF17293 Arm DNA-binding domain 9 95 4.0E-11 T 11-10-2018 IPR035386 Arm, DNA-binding domain TF3313_0403 6dc7f5a449626218ee9408a8edaa0b3b 411 Gene3D G3DSA:1.10.150.130 104 220 3.0E-21 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal TF3313_0403 6dc7f5a449626218ee9408a8edaa0b3b 411 Pfam PF00589 Phage integrase family 224 385 2.8E-15 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TF3313_0449 1e5b3dd5bb3b797da1744242a53c8731 181 Pfam PF02620 Uncharacterized ACR, COG1399 47 178 3.3E-23 T 11-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD TF3313_2326 f6c1a8dd83fb1a180ea8424a1661dbe4 543 Gene3D G3DSA:1.10.60.40 299 411 2.9E-117 T 11-10-2018 TF3313_2326 f6c1a8dd83fb1a180ea8424a1661dbe4 543 Pfam PF00245 Alkaline phosphatase 10 450 1.6E-68 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 TF3313_2326 f6c1a8dd83fb1a180ea8424a1661dbe4 543 PRINTS PR00113 Alkaline phosphatase signature 9 29 4.7E-28 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 TF3313_2326 f6c1a8dd83fb1a180ea8424a1661dbe4 543 PRINTS PR00113 Alkaline phosphatase signature 114 134 4.7E-28 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 TF3313_2326 f6c1a8dd83fb1a180ea8424a1661dbe4 543 PRINTS PR00113 Alkaline phosphatase signature 223 252 4.7E-28 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 TF3313_2326 f6c1a8dd83fb1a180ea8424a1661dbe4 543 PRINTS PR00113 Alkaline phosphatase signature 158 168 4.7E-28 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 TF3313_2326 f6c1a8dd83fb1a180ea8424a1661dbe4 543 SUPERFAMILY SSF53649 5 451 1.96E-96 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 TF3313_2326 f6c1a8dd83fb1a180ea8424a1661dbe4 543 Gene3D G3DSA:3.40.720.10 13 441 2.9E-117 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 TF3313_2326 f6c1a8dd83fb1a180ea8424a1661dbe4 543 SMART SM00098 10 452 3.6E-29 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 TF3313_2168 0614df333eb718c14cf4d3e357324eb3 87 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 1 81 1.7E-10 T 11-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 TF3313_2168 0614df333eb718c14cf4d3e357324eb3 87 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 1 87 13.552 T 11-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 TF3313_2168 0614df333eb718c14cf4d3e357324eb3 87 Pfam PF09827 CRISPR associated protein Cas2 1 70 2.8E-20 T 11-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 TF3313_2168 0614df333eb718c14cf4d3e357324eb3 87 SUPERFAMILY SSF143430 1 80 1.15E-24 T 11-10-2018 TF3313_2168 0614df333eb718c14cf4d3e357324eb3 87 Gene3D G3DSA:3.30.70.240 1 66 4.8E-29 T 11-10-2018 TF3313_1866 ba3f1e2279a621419705fc04a313d386 439 Gene3D G3DSA:2.30.42.10 219 297 3.5E-9 T 11-10-2018 TF3313_1866 ba3f1e2279a621419705fc04a313d386 439 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 8 437 8.8E-61 T 11-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 TF3313_1866 ba3f1e2279a621419705fc04a313d386 439 Pfam PF02163 Peptidase family M50 11 424 1.3E-52 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 TF3313_1866 ba3f1e2279a621419705fc04a313d386 439 SUPERFAMILY SSF50156 108 200 5.75E-5 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 TF3313_1866 ba3f1e2279a621419705fc04a313d386 439 SUPERFAMILY SSF50156 217 290 3.93E-8 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 TF3313_1216 cfe50593e0c9ad5b118db25e0a5aca9a 420 Pfam PF01136 Peptidase family U32 85 316 1.3E-65 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 TF3313_1216 cfe50593e0c9ad5b118db25e0a5aca9a 420 ProSitePatterns PS01276 Peptidase family U32 signature. 176 194 - T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 TF3313_1419 0dc6551eae269e959cb471ef124c2098 144 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 2.7E-48 T 11-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 TF3313_1419 0dc6551eae269e959cb471ef124c2098 144 PRINTS PR00060 Ribosomal protein L16 signature 24 36 6.6E-35 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1419 0dc6551eae269e959cb471ef124c2098 144 PRINTS PR00060 Ribosomal protein L16 signature 42 53 6.6E-35 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1419 0dc6551eae269e959cb471ef124c2098 144 PRINTS PR00060 Ribosomal protein L16 signature 58 87 6.6E-35 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1419 0dc6551eae269e959cb471ef124c2098 144 PRINTS PR00060 Ribosomal protein L16 signature 88 117 6.6E-35 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1419 0dc6551eae269e959cb471ef124c2098 144 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 37.799 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1419 0dc6551eae269e959cb471ef124c2098 144 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 1.6E-55 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1419 0dc6551eae269e959cb471ef124c2098 144 SUPERFAMILY SSF54686 1 139 4.45E-55 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 TF3313_1419 0dc6551eae269e959cb471ef124c2098 144 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1419 0dc6551eae269e959cb471ef124c2098 144 Gene3D G3DSA:3.90.1170.10 1 144 1.5E-53 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 TF3313_2587 d62eeb3c8c92e3b1580d85ccd360b7a7 421 SUPERFAMILY SSF51735 5 191 8.12E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_2587 d62eeb3c8c92e3b1580d85ccd360b7a7 421 SMART SM00984 317 414 1.5E-29 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TF3313_2587 d62eeb3c8c92e3b1580d85ccd360b7a7 421 PIRSF PIRSF500136 1 421 7.1E-146 T 11-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 TF3313_2587 d62eeb3c8c92e3b1580d85ccd360b7a7 421 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 181 2.4E-29 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TF3313_2587 d62eeb3c8c92e3b1580d85ccd360b7a7 421 SUPERFAMILY SSF52413 304 416 6.28E-26 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 TF3313_2587 d62eeb3c8c92e3b1580d85ccd360b7a7 421 Gene3D G3DSA:3.40.50.720 201 420 3.0E-54 T 11-10-2018 TF3313_2587 d62eeb3c8c92e3b1580d85ccd360b7a7 421 Gene3D G3DSA:3.40.50.720 1 197 1.5E-55 T 11-10-2018 TF3313_2587 d62eeb3c8c92e3b1580d85ccd360b7a7 421 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 202 290 1.1E-24 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TF3313_2587 d62eeb3c8c92e3b1580d85ccd360b7a7 421 SUPERFAMILY SSF48179 200 291 4.25E-25 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TF3313_2587 d62eeb3c8c92e3b1580d85ccd360b7a7 421 PIRSF PIRSF000124 4 418 2.1E-54 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 TF3313_2587 d62eeb3c8c92e3b1580d85ccd360b7a7 421 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 317 412 4.3E-20 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TF3313_2587 d62eeb3c8c92e3b1580d85ccd360b7a7 421 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 409 1.7E-110 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 TF3313_2086 d9ebbc06a227f2ffa42655b91527bda0 251 PRINTS PR00086 L-lactate dehydrogenase signature 150 170 8.6E-5 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 TF3313_2086 d9ebbc06a227f2ffa42655b91527bda0 251 PRINTS PR00086 L-lactate dehydrogenase signature 26 50 8.6E-5 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 TF3313_2086 d9ebbc06a227f2ffa42655b91527bda0 251 SUPERFAMILY SSF69572 7 244 1.96E-46 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 TF3313_2086 d9ebbc06a227f2ffa42655b91527bda0 251 Pfam PF00899 ThiF family 13 220 1.1E-31 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 TF3313_2086 d9ebbc06a227f2ffa42655b91527bda0 251 Gene3D G3DSA:3.40.50.720 2 250 1.1E-66 T 11-10-2018 TF3313_2807 956e111e8982f65aa72b8804868596b3 457 Pfam PF13481 AAA domain 160 316 2.0E-6 T 11-10-2018 TF3313_2807 956e111e8982f65aa72b8804868596b3 457 SUPERFAMILY SSF52540 154 366 1.63E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2807 956e111e8982f65aa72b8804868596b3 457 SUPERFAMILY SSF56731 6 141 2.62E-9 T 11-10-2018 TF3313_2807 956e111e8982f65aa72b8804868596b3 457 Gene3D G3DSA:3.40.50.300 157 394 2.5E-10 T 11-10-2018 TF3313_2807 956e111e8982f65aa72b8804868596b3 457 Pfam PF13155 Toprim-like 17 100 1.6E-5 T 11-10-2018 TF3313_2807 956e111e8982f65aa72b8804868596b3 457 Gene3D G3DSA:3.40.1360.10 2 117 1.1E-12 T 11-10-2018 TF3313_2591 a5f8d34be5a5651b9114073804384671 247 SUPERFAMILY SSF51735 105 247 8.76E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_2591 a5f8d34be5a5651b9114073804384671 247 Gene3D G3DSA:3.40.50.10860 4 245 5.8E-66 T 11-10-2018 TF3313_2591 a5f8d34be5a5651b9114073804384671 247 Gene3D G3DSA:3.40.50.720 104 229 5.8E-66 T 11-10-2018 TF3313_2591 a5f8d34be5a5651b9114073804384671 247 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 87 3.9E-22 T 11-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 TF3313_2591 a5f8d34be5a5651b9114073804384671 247 SUPERFAMILY SSF53223 2 103 5.24E-22 T 11-10-2018 TF3313_2178 4b484494b14d3a5679e9aaedc61eed5b 118 Gene3D G3DSA:3.30.1130.10 1 118 2.5E-34 T 11-10-2018 TF3313_2178 4b484494b14d3a5679e9aaedc61eed5b 118 Pfam PF02152 Dihydroneopterin aldolase 5 115 1.4E-25 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 TF3313_2178 4b484494b14d3a5679e9aaedc61eed5b 118 SUPERFAMILY SSF55620 1 116 6.67E-24 T 11-10-2018 TF3313_2178 4b484494b14d3a5679e9aaedc61eed5b 118 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 115 4.0E-28 T 11-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 TF3313_2178 4b484494b14d3a5679e9aaedc61eed5b 118 TIGRFAM TIGR00526 folB_dom: FolB domain 4 116 6.9E-20 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 TF3313_2178 4b484494b14d3a5679e9aaedc61eed5b 118 SMART SM00905 5 117 5.7E-33 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 TF3313_2677 769b8866db08708d89b5303e962ce5c2 1352 SUPERFAMILY SSF52172 1094 1218 2.13E-35 T 11-10-2018 IPR011006 CheY-like superfamily TF3313_2677 769b8866db08708d89b5303e962ce5c2 1352 SUPERFAMILY SSF63829 184 407 8.34E-15 T 11-10-2018 TF3313_2677 769b8866db08708d89b5303e962ce5c2 1352 SUPERFAMILY SSF46689 1291 1341 5.82E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TF3313_2677 769b8866db08708d89b5303e962ce5c2 1352 Gene3D G3DSA:1.10.10.60 1232 1344 1.6E-26 T 11-10-2018 TF3313_2677 769b8866db08708d89b5303e962ce5c2 1352 PRINTS PR00344 Bacterial sensor protein C-terminal signature 969 983 2.1E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_2677 769b8866db08708d89b5303e962ce5c2 1352 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1008 1026 2.1E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_2677 769b8866db08708d89b5303e962ce5c2 1352 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1032 1045 2.1E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_2677 769b8866db08708d89b5303e962ce5c2 1352 SMART SM00387 932 1048 5.1E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TF3313_2677 769b8866db08708d89b5303e962ce5c2 1352 Pfam PF12833 Helix-turn-helix domain 1263 1341 7.2E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TF3313_2677 769b8866db08708d89b5303e962ce5c2 1352 SUPERFAMILY SSF63829 357 592 2.16E-15 T 11-10-2018 TF3313_2677 769b8866db08708d89b5303e962ce5c2 1352 Pfam PF00072 Response regulator receiver domain 1095 1204 3.8E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TF3313_2677 769b8866db08708d89b5303e962ce5c2 1352 Pfam PF00512 His Kinase A (phospho-acceptor) domain 820 885 5.8E-7 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TF3313_2677 769b8866db08708d89b5303e962ce5c2 1352 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 933 1046 1.6E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TF3313_2677 769b8866db08708d89b5303e962ce5c2 1352 SUPERFAMILY SSF47384 809 887 5.3E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TF3313_2677 769b8866db08708d89b5303e962ce5c2 1352 SUPERFAMILY SSF55874 875 1045 3.14E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TF3313_2677 769b8866db08708d89b5303e962ce5c2 1352 Gene3D G3DSA:3.40.50.2300 1081 1223 1.2E-34 T 11-10-2018 TF3313_2677 769b8866db08708d89b5303e962ce5c2 1352 Gene3D G3DSA:3.30.565.10 889 1048 2.0E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TF3313_2677 769b8866db08708d89b5303e962ce5c2 1352 Gene3D G3DSA:1.10.287.130 807 888 1.8E-14 T 11-10-2018 TF3313_2677 769b8866db08708d89b5303e962ce5c2 1352 Gene3D G3DSA:2.130.10.10 33 329 3.8E-74 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TF3313_2677 769b8866db08708d89b5303e962ce5c2 1352 SMART SM00448 1093 1205 1.8E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TF3313_2677 769b8866db08708d89b5303e962ce5c2 1352 Pfam PF07494 Two component regulator propeller 251 273 3.4E-4 T 11-10-2018 IPR011110 Two component regulator propeller TF3313_2677 769b8866db08708d89b5303e962ce5c2 1352 Pfam PF07494 Two component regulator propeller 298 319 6.1E-4 T 11-10-2018 IPR011110 Two component regulator propeller TF3313_2677 769b8866db08708d89b5303e962ce5c2 1352 Pfam PF07494 Two component regulator propeller 208 226 0.0067 T 11-10-2018 IPR011110 Two component regulator propeller TF3313_2677 769b8866db08708d89b5303e962ce5c2 1352 SMART SM00388 820 886 2.7E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TF3313_2677 769b8866db08708d89b5303e962ce5c2 1352 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1292 1335 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TF3313_2677 769b8866db08708d89b5303e962ce5c2 1352 Gene3D G3DSA:2.130.10.10 342 644 7.1E-55 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TF3313_2677 769b8866db08708d89b5303e962ce5c2 1352 SMART SM00342 1255 1339 1.4E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TF3313_2677 769b8866db08708d89b5303e962ce5c2 1352 Gene3D G3DSA:2.60.40.10 647 778 9.8E-22 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_0430 9e7c3c86c2ea97260ba63c9dcf63983d 771 SUPERFAMILY SSF53955 36 257 5.06E-58 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily TF3313_0430 9e7c3c86c2ea97260ba63c9dcf63983d 771 Gene3D G3DSA:3.40.710.10 250 617 7.4E-67 T 11-10-2018 TF3313_0430 9e7c3c86c2ea97260ba63c9dcf63983d 771 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 34 769 3.6E-236 T 11-10-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TF3313_0430 9e7c3c86c2ea97260ba63c9dcf63983d 771 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 677 766 6.0E-17 T 11-10-2018 IPR009647 Penicillin-binding, C-terminal KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TF3313_0430 9e7c3c86c2ea97260ba63c9dcf63983d 771 SUPERFAMILY SSF56601 208 637 6.05E-82 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TF3313_0430 9e7c3c86c2ea97260ba63c9dcf63983d 771 Pfam PF00912 Transglycosylase 65 224 1.9E-44 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TF3313_0430 9e7c3c86c2ea97260ba63c9dcf63983d 771 Gene3D G3DSA:1.10.3810.10 57 247 3.5E-50 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TF3313_0430 9e7c3c86c2ea97260ba63c9dcf63983d 771 Pfam PF00905 Penicillin binding protein transpeptidase domain 301 547 9.1E-10 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 TF3313_1811 59b13cfe32f39460d36e4efd8fee3bfa 67 SUPERFAMILY SSF46785 7 63 2.1E-7 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TF3313_1811 59b13cfe32f39460d36e4efd8fee3bfa 67 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 50 2.5E-9 T 11-10-2018 TF3313_1811 59b13cfe32f39460d36e4efd8fee3bfa 67 Gene3D G3DSA:1.10.10.10 3 62 1.6E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_1684 ef97bd9ae4c1b217165c55e43543a108 233 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 4 230 1.9E-72 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 TF3313_1684 ef97bd9ae4c1b217165c55e43543a108 233 Gene3D G3DSA:3.30.950.10 111 224 2.0E-41 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 TF3313_1684 ef97bd9ae4c1b217165c55e43543a108 233 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 202 1.8E-31 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 TF3313_1684 ef97bd9ae4c1b217165c55e43543a108 233 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 81 92 - T 11-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 TF3313_1684 ef97bd9ae4c1b217165c55e43543a108 233 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 3 221 36.56 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 TF3313_1684 ef97bd9ae4c1b217165c55e43543a108 233 SUPERFAMILY SSF53790 2 219 1.57E-78 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 TF3313_1684 ef97bd9ae4c1b217165c55e43543a108 233 Gene3D G3DSA:3.40.1010.10 1 110 1.3E-41 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 TF3313_1684 ef97bd9ae4c1b217165c55e43543a108 233 PIRSF PIRSF005917 1 233 7.1E-94 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 TF3313_1436 f2bc59871c12d7123368c8c99e88884d 129 Pfam PF00411 Ribosomal protein S11 19 128 1.6E-43 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 TF3313_1436 f2bc59871c12d7123368c8c99e88884d 129 SUPERFAMILY SSF53137 15 129 1.11E-44 T 11-10-2018 TF3313_1436 f2bc59871c12d7123368c8c99e88884d 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 30.644 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 TF3313_1436 f2bc59871c12d7123368c8c99e88884d 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 11-10-2018 IPR018102 Ribosomal S11, conserved site TF3313_1436 f2bc59871c12d7123368c8c99e88884d 129 Gene3D G3DSA:3.30.420.80 1 129 8.1E-48 T 11-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 TF3313_1436 f2bc59871c12d7123368c8c99e88884d 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 9.1E-54 T 11-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1436 f2bc59871c12d7123368c8c99e88884d 129 PIRSF PIRSF002131 1 129 2.1E-51 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 TF3313_1938 7026534074d98dfb9dda5a419e395364 506 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 9 214 2.1E-31 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 TF3313_1938 7026534074d98dfb9dda5a419e395364 506 Pfam PF01256 Carbohydrate kinase 253 482 7.1E-60 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 TF3313_1938 7026534074d98dfb9dda5a419e395364 506 SUPERFAMILY SSF64153 3 251 2.22E-50 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 TF3313_1938 7026534074d98dfb9dda5a419e395364 506 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 235 498 2.8E-64 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 TF3313_1938 7026534074d98dfb9dda5a419e395364 506 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 439 449 - T 11-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site TF3313_1938 7026534074d98dfb9dda5a419e395364 506 Pfam PF03853 YjeF-related protein N-terminus 27 192 1.7E-38 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 TF3313_1938 7026534074d98dfb9dda5a419e395364 506 PIRSF PIRSF017184 2 506 3.4E-131 T 11-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 TF3313_1938 7026534074d98dfb9dda5a419e395364 506 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 6 214 21.554 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 TF3313_1938 7026534074d98dfb9dda5a419e395364 506 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 229 504 21.502 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 TF3313_1938 7026534074d98dfb9dda5a419e395364 506 SUPERFAMILY SSF53613 226 499 5.24E-70 T 11-10-2018 IPR029056 Ribokinase-like TF3313_1938 7026534074d98dfb9dda5a419e395364 506 Gene3D G3DSA:3.40.1190.20 227 505 9.5E-84 T 11-10-2018 IPR029056 Ribokinase-like TF3313_1938 7026534074d98dfb9dda5a419e395364 506 Gene3D G3DSA:3.40.50.10260 2 220 9.6E-58 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 TF3313_2585 076979a6eab4b948cf110071a6c0f1e3 418 Gene3D G3DSA:2.60.40.10 293 393 4.6E-6 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_2585 076979a6eab4b948cf110071a6c0f1e3 418 Pfam PF17116 Domain of unknown function (DUF5103) 29 315 2.4E-105 T 11-10-2018 IPR031345 Protein of unknown function DUF5103 TF3313_2161 49db6b753bf017c940a2e08cc08ba6fe 322 SUPERFAMILY SSF52540 94 291 6.54E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2161 49db6b753bf017c940a2e08cc08ba6fe 322 Gene3D G3DSA:3.40.50.300 75 223 1.2E-8 T 11-10-2018 TF3313_2161 49db6b753bf017c940a2e08cc08ba6fe 322 SUPERFAMILY SSF47413 5 64 3.25E-6 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TF3313_2161 49db6b753bf017c940a2e08cc08ba6fe 322 Pfam PF13401 AAA domain 97 216 1.6E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_1274 60505b2e92b4a4708bba9d1319beaff7 526 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 20 517 2.2E-190 T 11-10-2018 IPR004482 Mg chelatase-related protein TF3313_1274 60505b2e92b4a4708bba9d1319beaff7 526 Gene3D G3DSA:3.30.230.10 21 182 1.4E-14 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TF3313_1274 60505b2e92b4a4708bba9d1319beaff7 526 Pfam PF13541 Subunit ChlI of Mg-chelatase 34 155 1.4E-43 T 11-10-2018 TF3313_1274 60505b2e92b4a4708bba9d1319beaff7 526 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 226 241 6.1E-5 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 TF3313_1274 60505b2e92b4a4708bba9d1319beaff7 526 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 307 321 6.1E-5 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 TF3313_1274 60505b2e92b4a4708bba9d1319beaff7 526 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 335 348 6.1E-5 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 TF3313_1274 60505b2e92b4a4708bba9d1319beaff7 526 SUPERFAMILY SSF54211 18 182 6.07E-33 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TF3313_1274 60505b2e92b4a4708bba9d1319beaff7 526 Pfam PF01078 Magnesium chelatase, subunit ChlI 207 412 2.3E-98 T 11-10-2018 IPR000523 Magnesium chelatase ChlI domain TF3313_1274 60505b2e92b4a4708bba9d1319beaff7 526 Gene3D G3DSA:3.40.50.300 208 519 4.6E-59 T 11-10-2018 TF3313_1274 60505b2e92b4a4708bba9d1319beaff7 526 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 421 517 2.6E-33 T 11-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain TF3313_1274 60505b2e92b4a4708bba9d1319beaff7 526 SUPERFAMILY SSF52540 206 520 3.38E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1274 60505b2e92b4a4708bba9d1319beaff7 526 SMART SM00382 227 410 3.8E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_2620 221dc0ffb91f305b405445a0f2b27474 255 Gene3D G3DSA:3.60.40.10 6 247 4.4E-52 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TF3313_2620 221dc0ffb91f305b405445a0f2b27474 255 SMART SM00331 19 247 1.5E-18 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TF3313_2620 221dc0ffb91f305b405445a0f2b27474 255 SMART SM00332 1 245 5.9E-7 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TF3313_2620 221dc0ffb91f305b405445a0f2b27474 255 SUPERFAMILY SSF81606 10 245 3.4E-47 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TF3313_2620 221dc0ffb91f305b405445a0f2b27474 255 Pfam PF13672 Protein phosphatase 2C 19 216 3.1E-16 T 11-10-2018 TF3313_2522 b5ff7ea171138bcb88b7875bcf58d17a 254 Pfam PF13432 Tetratricopeptide repeat 30 86 2.8E-10 T 11-10-2018 TF3313_2522 b5ff7ea171138bcb88b7875bcf58d17a 254 SMART SM00028 59 92 1.6E-6 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2522 b5ff7ea171138bcb88b7875bcf58d17a 254 SMART SM00028 25 58 370.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2522 b5ff7ea171138bcb88b7875bcf58d17a 254 Pfam PF08239 Bacterial SH3 domain 204 251 1.5E-7 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type TF3313_2522 b5ff7ea171138bcb88b7875bcf58d17a 254 SUPERFAMILY SSF48452 29 105 2.46E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2522 b5ff7ea171138bcb88b7875bcf58d17a 254 Gene3D G3DSA:2.30.30.40 186 253 5.1E-10 T 11-10-2018 TF3313_2522 b5ff7ea171138bcb88b7875bcf58d17a 254 Gene3D G3DSA:1.25.40.10 20 112 5.8E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2538 c74435aaabbe9a0f9b585e0851ff57d5 346 Gene3D G3DSA:3.30.160.60 306 344 1.1E-5 T 11-10-2018 TF3313_2538 c74435aaabbe9a0f9b585e0851ff57d5 346 Pfam PF02618 YceG-like family 46 334 2.1E-63 T 11-10-2018 IPR003770 Endolytic murein transglycosylase TF3313_2538 c74435aaabbe9a0f9b585e0851ff57d5 346 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 13 343 29.16 T 11-10-2018 IPR003770 Endolytic murein transglycosylase TF3313_2538 c74435aaabbe9a0f9b585e0851ff57d5 346 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 18 340 5.2E-44 T 11-10-2018 IPR003770 Endolytic murein transglycosylase TF3313_2238 4f8b49bee36b31ba05cf9a35b1219d68 365 Gene3D G3DSA:3.40.50.2000 6 360 5.7E-121 T 11-10-2018 TF3313_2238 4f8b49bee36b31ba05cf9a35b1219d68 365 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 32 363 3.5E-107 T 11-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 TF3313_2238 4f8b49bee36b31ba05cf9a35b1219d68 365 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 363 1.3E-96 T 11-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 TF3313_2238 4f8b49bee36b31ba05cf9a35b1219d68 365 Gene3D G3DSA:3.40.50.2000 191 350 5.7E-121 T 11-10-2018 TF3313_2238 4f8b49bee36b31ba05cf9a35b1219d68 365 SUPERFAMILY SSF53756 1 364 1.73E-100 T 11-10-2018 TF3313_2954 1a57912111b9d589b5a6c86ae9ba5dc3 118 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 6.4E-25 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2954 1a57912111b9d589b5a6c86ae9ba5dc3 118 Pfam PF01250 Ribosomal protein S6 3 92 1.2E-31 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2954 1a57912111b9d589b5a6c86ae9ba5dc3 118 Gene3D G3DSA:3.30.70.60 1 102 2.0E-33 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 TF3313_2954 1a57912111b9d589b5a6c86ae9ba5dc3 118 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 19.668 T 11-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 TF3313_2954 1a57912111b9d589b5a6c86ae9ba5dc3 118 SUPERFAMILY SSF54995 1 99 6.67E-34 T 11-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_0780 5cbfdbaffbea52e3af09272451fba341 1561 SUPERFAMILY SSF82866 295 483 3.92E-36 T 11-10-2018 TF3313_0780 5cbfdbaffbea52e3af09272451fba341 1561 SUPERFAMILY SSF82693 50 122 7.59E-10 T 11-10-2018 TF3313_0780 5cbfdbaffbea52e3af09272451fba341 1561 Gene3D G3DSA:3.30.70.1440 645 866 6.5E-215 T 11-10-2018 TF3313_0780 5cbfdbaffbea52e3af09272451fba341 1561 Pfam PF00005 ABC transporter 1292 1436 1.3E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TF3313_0780 5cbfdbaffbea52e3af09272451fba341 1561 SUPERFAMILY SSF52540 1284 1488 2.32E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0780 5cbfdbaffbea52e3af09272451fba341 1561 Gene3D G3DSA:3.30.70.1320 133 320 6.5E-215 T 11-10-2018 TF3313_0780 5cbfdbaffbea52e3af09272451fba341 1561 Gene3D G3DSA:3.40.50.300 1278 1501 2.3E-52 T 11-10-2018 TF3313_0780 5cbfdbaffbea52e3af09272451fba341 1561 Gene3D G3DSA:1.20.1640.10 499 1022 6.5E-215 T 11-10-2018 TF3313_0780 5cbfdbaffbea52e3af09272451fba341 1561 Gene3D G3DSA:3.30.70.1430 37 814 6.5E-215 T 11-10-2018 TF3313_0780 5cbfdbaffbea52e3af09272451fba341 1561 Gene3D G3DSA:3.30.70.1430 553 644 6.5E-215 T 11-10-2018 TF3313_0780 5cbfdbaffbea52e3af09272451fba341 1561 Gene3D G3DSA:1.20.1640.10 7 498 6.5E-215 T 11-10-2018 TF3313_0780 5cbfdbaffbea52e3af09272451fba341 1561 SUPERFAMILY SSF82866 810 1027 2.35E-34 T 11-10-2018 TF3313_0780 5cbfdbaffbea52e3af09272451fba341 1561 SUPERFAMILY SSF82714 182 259 9.94E-5 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TF3313_0780 5cbfdbaffbea52e3af09272451fba341 1561 ProSitePatterns PS00211 ABC transporters family signature. 1408 1422 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TF3313_0780 5cbfdbaffbea52e3af09272451fba341 1561 Gene3D G3DSA:3.30.2090.10 177 266 6.5E-215 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TF3313_0780 5cbfdbaffbea52e3af09272451fba341 1561 SUPERFAMILY SSF82714 708 801 5.36E-5 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TF3313_0780 5cbfdbaffbea52e3af09272451fba341 1561 SMART SM00382 1300 1482 2.5E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_0780 5cbfdbaffbea52e3af09272451fba341 1561 PRINTS PR00702 Acriflavin resistance protein family signature 326 349 1.6E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_0780 5cbfdbaffbea52e3af09272451fba341 1561 PRINTS PR00702 Acriflavin resistance protein family signature 381 405 1.6E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_0780 5cbfdbaffbea52e3af09272451fba341 1561 PRINTS PR00702 Acriflavin resistance protein family signature 7 31 1.6E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_0780 5cbfdbaffbea52e3af09272451fba341 1561 PRINTS PR00702 Acriflavin resistance protein family signature 353 374 1.6E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_0780 5cbfdbaffbea52e3af09272451fba341 1561 PRINTS PR00702 Acriflavin resistance protein family signature 460 483 1.6E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_0780 5cbfdbaffbea52e3af09272451fba341 1561 Pfam PF00873 AcrB/AcrD/AcrF family 2 1023 1.1E-154 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_0780 5cbfdbaffbea52e3af09272451fba341 1561 SUPERFAMILY SSF82693 149 318 1.1E-9 T 11-10-2018 TF3313_0780 5cbfdbaffbea52e3af09272451fba341 1561 Gene3D G3DSA:3.30.2090.10 709 806 6.5E-215 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TF3313_1719 a048a1194be5cfd5cc2d3887002fcaef 240 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 2 236 4.6E-78 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TF3313_1719 a048a1194be5cfd5cc2d3887002fcaef 240 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 237 29.689 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TF3313_1719 a048a1194be5cfd5cc2d3887002fcaef 240 Gene3D G3DSA:3.30.70.980 83 234 1.1E-48 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TF3313_1719 a048a1194be5cfd5cc2d3887002fcaef 240 Gene3D G3DSA:1.10.10.200 21 77 7.6E-26 T 11-10-2018 IPR017856 Integrase-like, N-terminal TF3313_1719 a048a1194be5cfd5cc2d3887002fcaef 240 Pfam PF01709 Transcriptional regulator 5 235 6.4E-79 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TF3313_1719 a048a1194be5cfd5cc2d3887002fcaef 240 SUPERFAMILY SSF75625 1 236 4.32E-80 T 11-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TF3313_1719 a048a1194be5cfd5cc2d3887002fcaef 240 Gene3D G3DSA:3.30.70.980 131 201 1.1E-48 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TF3313_0782 9a14f51b00628f8b1b8d8da94e09d5f0 355 Gene3D G3DSA:1.10.287.470 104 165 3.0E-54 T 11-10-2018 TF3313_0782 9a14f51b00628f8b1b8d8da94e09d5f0 355 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 353 1.0E-57 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TF3313_0782 9a14f51b00628f8b1b8d8da94e09d5f0 355 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 88 272 7.0E-24 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TF3313_0782 9a14f51b00628f8b1b8d8da94e09d5f0 355 Gene3D G3DSA:2.40.30.170 53 283 3.0E-54 T 11-10-2018 TF3313_0782 9a14f51b00628f8b1b8d8da94e09d5f0 355 SUPERFAMILY SSF111369 54 277 2.88E-21 T 11-10-2018 TF3313_0782 9a14f51b00628f8b1b8d8da94e09d5f0 355 Gene3D G3DSA:2.40.50.100 62 200 3.0E-54 T 11-10-2018 TF3313_0782 9a14f51b00628f8b1b8d8da94e09d5f0 355 Gene3D G3DSA:2.40.420.20 284 351 3.0E-54 T 11-10-2018 TF3313_1699 852ba8e08555646836408e661b82b800 2032 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1310 1341 0.002 T 11-10-2018 IPR006530 YD repeat TF3313_1699 852ba8e08555646836408e661b82b800 2032 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1229 1263 6.3E-6 T 11-10-2018 IPR006530 YD repeat TF3313_1699 852ba8e08555646836408e661b82b800 2032 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1290 1326 1.4E-4 T 11-10-2018 IPR006530 YD repeat TF3313_1699 852ba8e08555646836408e661b82b800 2032 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1048 1078 8.9E-4 T 11-10-2018 IPR006530 YD repeat TF3313_1699 852ba8e08555646836408e661b82b800 2032 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1269 1304 5.0E-6 T 11-10-2018 IPR006530 YD repeat TF3313_1699 852ba8e08555646836408e661b82b800 2032 Pfam PF12256 Insecticide toxin TcdB middle/N-terminal region 715 852 2.9E-15 T 11-10-2018 IPR022045 Insecticide toxin TcdB middle/N-terminal TF3313_1699 852ba8e08555646836408e661b82b800 2032 Pfam PF05593 RHS Repeat 1269 1299 6.0E-5 T 11-10-2018 IPR031325 RHS repeat TF3313_1699 852ba8e08555646836408e661b82b800 2032 Pfam PF05593 RHS Repeat 1048 1083 2.1E-5 T 11-10-2018 IPR031325 RHS repeat TF3313_1699 852ba8e08555646836408e661b82b800 2032 Pfam PF05593 RHS Repeat 1230 1261 1.1E-5 T 11-10-2018 IPR031325 RHS repeat TF3313_1699 852ba8e08555646836408e661b82b800 2032 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1642 1731 1.3E-17 T 11-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 TF3313_1699 852ba8e08555646836408e661b82b800 2032 Gene3D G3DSA:2.180.10.10 1518 1731 2.0E-19 T 11-10-2018 TF3313_1699 852ba8e08555646836408e661b82b800 2032 Gene3D G3DSA:2.180.10.10 1195 1380 1.1E-8 T 11-10-2018 TF3313_1699 852ba8e08555646836408e661b82b800 2032 Pfam PF03534 Salmonella virulence plasmid 65kDa B protein 112 276 2.0E-12 T 11-10-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 TF3313_1699 852ba8e08555646836408e661b82b800 2032 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 558 617 1.8E-8 T 11-10-2018 TF3313_1699 852ba8e08555646836408e661b82b800 2032 SUPERFAMILY SSF69318 386 732 2.53E-32 T 11-10-2018 TF3313_1042 f4a419727adb19d55b0b17a4485e2eae 168 SUPERFAMILY SSF52255 3 162 1.7E-62 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 TF3313_1042 f4a419727adb19d55b0b17a4485e2eae 168 PIRSF PIRSF001338 1 162 5.0E-68 T 11-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 TF3313_1042 f4a419727adb19d55b0b17a4485e2eae 168 Gene3D G3DSA:3.40.50.7700 1 168 1.7E-68 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 TF3313_1042 f4a419727adb19d55b0b17a4485e2eae 168 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 5 158 4.1E-62 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 TF3313_1042 f4a419727adb19d55b0b17a4485e2eae 168 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 5 155 32.217 T 11-10-2018 IPR033747 Class I PurE TF3313_1042 f4a419727adb19d55b0b17a4485e2eae 168 Pfam PF00731 AIR carboxylase 5 149 7.4E-63 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 TF3313_1042 f4a419727adb19d55b0b17a4485e2eae 168 SMART SM01001 3 151 6.7E-90 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 TF3313_1406 d5c2788d81da941eaab56c21e27ca2ef 429 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 4 388 8.2E-150 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TF3313_1406 d5c2788d81da941eaab56c21e27ca2ef 429 Pfam PF02772 S-adenosylmethionine synthetase, central domain 113 253 1.5E-42 T 11-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TF3313_1406 d5c2788d81da941eaab56c21e27ca2ef 429 Gene3D G3DSA:3.30.300.10 4 255 2.2E-152 T 11-10-2018 TF3313_1406 d5c2788d81da941eaab56c21e27ca2ef 429 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 2 99 7.2E-42 T 11-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TF3313_1406 d5c2788d81da941eaab56c21e27ca2ef 429 Gene3D G3DSA:3.30.300.10 101 416 2.2E-152 T 11-10-2018 TF3313_1406 d5c2788d81da941eaab56c21e27ca2ef 429 SUPERFAMILY SSF55973 112 253 1.06E-37 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TF3313_1406 d5c2788d81da941eaab56c21e27ca2ef 429 Gene3D G3DSA:3.30.300.10 10 292 2.2E-152 T 11-10-2018 TF3313_1406 d5c2788d81da941eaab56c21e27ca2ef 429 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 281 289 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TF3313_1406 d5c2788d81da941eaab56c21e27ca2ef 429 SUPERFAMILY SSF55973 1 108 1.71E-43 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TF3313_1406 d5c2788d81da941eaab56c21e27ca2ef 429 SUPERFAMILY SSF55973 255 423 6.28E-57 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TF3313_1406 d5c2788d81da941eaab56c21e27ca2ef 429 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 115 125 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TF3313_1406 d5c2788d81da941eaab56c21e27ca2ef 429 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 1 427 50.779 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TF3313_1406 d5c2788d81da941eaab56c21e27ca2ef 429 PIRSF PIRSF000497 1 428 6.3E-162 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TF3313_1406 d5c2788d81da941eaab56c21e27ca2ef 429 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 255 388 4.2E-61 T 11-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TF3313_2513 1faffa686fe6c9c708c2be221f9f5eaa 212 SUPERFAMILY SSF56281 13 212 3.41E-43 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TF3313_2513 1faffa686fe6c9c708c2be221f9f5eaa 212 Gene3D G3DSA:3.60.15.10 2 212 6.1E-53 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TF3313_2513 1faffa686fe6c9c708c2be221f9f5eaa 212 Pfam PF00753 Metallo-beta-lactamase superfamily 13 196 7.2E-23 T 11-10-2018 IPR001279 Metallo-beta-lactamase TF3313_2513 1faffa686fe6c9c708c2be221f9f5eaa 212 SMART SM00849 13 196 4.3E-31 T 11-10-2018 IPR001279 Metallo-beta-lactamase TF3313_2312 b5e1998b5cbe3bc478bcd7cfc46315e4 260 SUPERFAMILY SSF53448 7 222 2.22E-46 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_2312 b5e1998b5cbe3bc478bcd7cfc46315e4 260 Gene3D G3DSA:3.90.550.10 4 243 1.9E-47 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_2312 b5e1998b5cbe3bc478bcd7cfc46315e4 260 Pfam PF00535 Glycosyl transferase family 2 7 173 7.3E-29 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TF3313_0693 de36230b5984f639906c3b995469ec2e 443 SUPERFAMILY SSF53633 1 287 2.59E-67 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TF3313_0693 de36230b5984f639906c3b995469ec2e 443 Gene3D G3DSA:3.30.70.260 369 443 4.0E-20 T 11-10-2018 TF3313_0693 de36230b5984f639906c3b995469ec2e 443 SUPERFAMILY SSF55021 376 436 1.9E-11 T 11-10-2018 TF3313_0693 de36230b5984f639906c3b995469ec2e 443 Pfam PF00696 Amino acid kinase family 3 275 3.5E-39 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 TF3313_0693 de36230b5984f639906c3b995469ec2e 443 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 436 4.1E-87 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 TF3313_0693 de36230b5984f639906c3b995469ec2e 443 Gene3D G3DSA:1.20.120.1320 38 134 6.9E-79 T 11-10-2018 TF3313_0693 de36230b5984f639906c3b995469ec2e 443 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 TF3313_0693 de36230b5984f639906c3b995469ec2e 443 Gene3D G3DSA:3.30.70.260 304 368 2.2E-31 T 11-10-2018 TF3313_0693 de36230b5984f639906c3b995469ec2e 443 SUPERFAMILY SSF55021 293 382 4.58E-16 T 11-10-2018 TF3313_0693 de36230b5984f639906c3b995469ec2e 443 PIRSF PIRSF000726 1 443 3.7E-88 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 TF3313_0693 de36230b5984f639906c3b995469ec2e 443 Gene3D G3DSA:3.40.1160.10 3 286 6.9E-79 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TF3313_1278 9d46a8b7682be79181055fd9d5ac7c62 521 Gene3D G3DSA:1.25.40.390 30 519 7.0E-86 T 11-10-2018 TF3313_1278 9d46a8b7682be79181055fd9d5ac7c62 521 SUPERFAMILY SSF48452 21 519 8.09E-91 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1278 9d46a8b7682be79181055fd9d5ac7c62 521 Pfam PF14322 Starch-binding associating with outer membrane 126 240 9.0E-8 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_1278 9d46a8b7682be79181055fd9d5ac7c62 521 Pfam PF07980 SusD family 375 519 9.3E-23 T 11-10-2018 IPR012944 RagB/SusD domain TF3313_0039 4ce888eb7758544ca0816b1f018d6f51 311 Pfam PF16269 Domain of unknown function (DUF4922) 112 300 2.3E-70 T 11-10-2018 TF3313_0039 4ce888eb7758544ca0816b1f018d6f51 311 SUPERFAMILY SSF54197 66 151 2.46E-6 T 11-10-2018 IPR036265 HIT-like superfamily TF3313_1722 c26c8c0c350d2e35bc83a5e403349133 240 Gene3D G3DSA:2.40.100.10 32 171 3.1E-30 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily TF3313_1722 c26c8c0c350d2e35bc83a5e403349133 240 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 84 96 3.6E-5 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TF3313_1722 c26c8c0c350d2e35bc83a5e403349133 240 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 58 73 3.6E-5 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TF3313_1722 c26c8c0c350d2e35bc83a5e403349133 240 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 132 147 3.6E-5 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TF3313_1722 c26c8c0c350d2e35bc83a5e403349133 240 PIRSF PIRSF001467 33 167 1.6E-16 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 TF3313_1722 c26c8c0c350d2e35bc83a5e403349133 240 PIRSF PIRSF001467 182 240 1.1E-10 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 TF3313_1722 c26c8c0c350d2e35bc83a5e403349133 240 SUPERFAMILY SSF50891 37 236 1.61E-43 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily TF3313_1722 c26c8c0c350d2e35bc83a5e403349133 240 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 46 236 9.8E-49 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TF3313_1722 c26c8c0c350d2e35bc83a5e403349133 240 Gene3D G3DSA:2.40.100.10 179 239 6.3E-15 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily TF3313_1947 ba70e6c7b8484dc51aec6cd3356a10ef 224 Gene3D G3DSA:2.60.120.10 40 223 8.9E-68 T 11-10-2018 IPR014710 RmlC-like jelly roll fold TF3313_1947 ba70e6c7b8484dc51aec6cd3356a10ef 224 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 40 210 1.0E-52 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 TF3313_1947 ba70e6c7b8484dc51aec6cd3356a10ef 224 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 44 215 1.5E-69 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 TF3313_1947 ba70e6c7b8484dc51aec6cd3356a10ef 224 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 41 218 7.3E-72 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 TF3313_1947 ba70e6c7b8484dc51aec6cd3356a10ef 224 SUPERFAMILY SSF51182 40 220 2.59E-73 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily TF3313_1496 8a6435a8fe1bad1e5d3e106f21ce1d0b 411 Pfam PF13186 Iron-sulfur cluster-binding domain 287 347 8.3E-7 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain TF3313_1496 8a6435a8fe1bad1e5d3e106f21ce1d0b 411 Pfam PF04055 Radical SAM superfamily 24 179 7.4E-14 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TF3313_1496 8a6435a8fe1bad1e5d3e106f21ce1d0b 411 Gene3D G3DSA:3.20.20.70 14 397 4.7E-117 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_1496 8a6435a8fe1bad1e5d3e106f21ce1d0b 411 SUPERFAMILY SSF102114 22 356 4.71E-47 T 11-10-2018 TF3313_1496 8a6435a8fe1bad1e5d3e106f21ce1d0b 411 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 18 394 3.0E-143 T 11-10-2018 TF3313_1496 8a6435a8fe1bad1e5d3e106f21ce1d0b 411 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 286 375 3.7E-18 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain TF3313_1496 8a6435a8fe1bad1e5d3e106f21ce1d0b 411 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 149 410 5.0E-10 T 11-10-2018 TF3313_2905 42db1cde43e522706e80bc41b9b7bfc9 854 PIRSF PIRSF000460 12 794 1.6E-254 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 TF3313_2905 42db1cde43e522706e80bc41b9b7bfc9 854 Pfam PF00343 Carbohydrate phosphorylase 270 622 6.8E-20 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 TF3313_2905 42db1cde43e522706e80bc41b9b7bfc9 854 Pfam PF11897 Protein of unknown function (DUF3417) 22 123 1.2E-31 T 11-10-2018 IPR024517 Glycogen phosphorylase, domain of unknown function DUF3417 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 TF3313_2905 42db1cde43e522706e80bc41b9b7bfc9 854 Gene3D G3DSA:3.40.50.2000 264 425 2.7E-10 T 11-10-2018 TF3313_2905 42db1cde43e522706e80bc41b9b7bfc9 854 Gene3D G3DSA:3.40.50.2000 119 187 1.9E-8 T 11-10-2018 TF3313_2905 42db1cde43e522706e80bc41b9b7bfc9 854 SUPERFAMILY SSF53756 6 742 3.37E-190 T 11-10-2018 TF3313_2905 42db1cde43e522706e80bc41b9b7bfc9 854 Gene3D G3DSA:3.40.50.2000 426 744 2.6E-41 T 11-10-2018 TF3313_2905 42db1cde43e522706e80bc41b9b7bfc9 854 TIGRFAM TIGR02094 more_P_ylases: alpha-glucan phosphorylases 110 711 1.3E-254 T 11-10-2018 IPR011834 Alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 TF3313_2030 41737f60863b1c317d635a2109a3bea6 335 Pfam PF00149 Calcineurin-like phosphoesterase 36 265 3.2E-17 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TF3313_2030 41737f60863b1c317d635a2109a3bea6 335 PIRSF PIRSF030250 8 326 6.1E-89 T 11-10-2018 IPR011230 Phosphoesterase At2g46880 TF3313_2030 41737f60863b1c317d635a2109a3bea6 335 Gene3D G3DSA:3.60.21.10 36 304 4.3E-19 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like TF3313_2030 41737f60863b1c317d635a2109a3bea6 335 SUPERFAMILY SSF56300 33 312 4.45E-38 T 11-10-2018 TF3313_0814 23c809252c6a2f04f25b9019e3350aa8 310 Gene3D G3DSA:3.40.50.1370 129 287 1.1E-103 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TF3313_0814 23c809252c6a2f04f25b9019e3350aa8 310 SUPERFAMILY SSF53671 2 301 2.34E-89 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TF3313_0814 23c809252c6a2f04f25b9019e3350aa8 310 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 4 298 7.1E-107 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TF3313_0814 23c809252c6a2f04f25b9019e3350aa8 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 35 57 1.7E-35 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TF3313_0814 23c809252c6a2f04f25b9019e3350aa8 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 281 295 1.7E-35 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TF3313_0814 23c809252c6a2f04f25b9019e3350aa8 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 74 83 1.7E-35 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TF3313_0814 23c809252c6a2f04f25b9019e3350aa8 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 259 264 1.7E-35 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TF3313_0814 23c809252c6a2f04f25b9019e3350aa8 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 128 145 1.7E-35 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TF3313_0814 23c809252c6a2f04f25b9019e3350aa8 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 220 229 1.7E-35 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TF3313_0814 23c809252c6a2f04f25b9019e3350aa8 310 Gene3D G3DSA:3.40.50.1370 4 297 1.1E-103 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TF3313_0814 23c809252c6a2f04f25b9019e3350aa8 310 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 141 2.3E-43 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 TF3313_0814 23c809252c6a2f04f25b9019e3350aa8 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 265 288 1.4E-21 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TF3313_0814 23c809252c6a2f04f25b9019e3350aa8 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 129 140 1.4E-21 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TF3313_0814 23c809252c6a2f04f25b9019e3350aa8 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 45 64 1.4E-21 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TF3313_0814 23c809252c6a2f04f25b9019e3350aa8 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 255 264 1.4E-21 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TF3313_0814 23c809252c6a2f04f25b9019e3350aa8 310 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 45 52 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TF3313_0814 23c809252c6a2f04f25b9019e3350aa8 310 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 3 302 35.734 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TF3313_0814 23c809252c6a2f04f25b9019e3350aa8 310 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 149 297 1.5E-24 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 TF3313_2473 dfee5f2e77c02c6bc802fbb072c3db2e 605 Pfam PF08497 Radical SAM N-terminal 9 306 5.5E-131 T 11-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal TF3313_2473 dfee5f2e77c02c6bc802fbb072c3db2e 605 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 307 327 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 TF3313_2473 dfee5f2e77c02c6bc802fbb072c3db2e 605 SUPERFAMILY SSF102114 284 557 1.57E-9 T 11-10-2018 TF3313_2473 dfee5f2e77c02c6bc802fbb072c3db2e 605 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 9 575 2.9E-246 T 11-10-2018 IPR022946 Uncharacterised protein family UPF0313 TF3313_2473 dfee5f2e77c02c6bc802fbb072c3db2e 605 Pfam PF11842 Domain of unknown function (DUF3362) 530 599 2.5E-8 T 11-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal TF3313_2473 dfee5f2e77c02c6bc802fbb072c3db2e 605 SMART SM00729 303 562 1.3E-4 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TF3313_2473 dfee5f2e77c02c6bc802fbb072c3db2e 605 Pfam PF04055 Radical SAM superfamily 307 490 3.2E-14 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TF3313_2473 dfee5f2e77c02c6bc802fbb072c3db2e 605 Gene3D G3DSA:3.80.30.20 303 568 5.0E-11 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TF3313_2473 dfee5f2e77c02c6bc802fbb072c3db2e 605 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 9 577 49.854 T 11-10-2018 IPR022946 Uncharacterised protein family UPF0313 TF3313_0211 b467413eccea1cca5c314908bf0b4888 178 Pfam PF13302 Acetyltransferase (GNAT) domain 11 149 1.2E-26 T 11-10-2018 IPR000182 GNAT domain TF3313_0211 b467413eccea1cca5c314908bf0b4888 178 Gene3D G3DSA:3.40.630.30 1 176 1.1E-47 T 11-10-2018 TF3313_0211 b467413eccea1cca5c314908bf0b4888 178 SUPERFAMILY SSF55729 8 175 9.37E-42 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TF3313_0955 2bc882a6683e147c65fb22039a2ecd49 33 SUPERFAMILY SSF111038 4 33 3.53E-8 T 11-10-2018 IPR035917 YjbQ-like superfamily TF3313_0955 2bc882a6683e147c65fb22039a2ecd49 33 Gene3D G3DSA:2.60.120.460 1 33 9.6E-8 T 11-10-2018 IPR035917 YjbQ-like superfamily TF3313_0955 2bc882a6683e147c65fb22039a2ecd49 33 Pfam PF01894 Uncharacterised protein family UPF0047 4 30 5.0E-5 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 TF3313_2213 ad97e1bd04e0a756779049b38eebf147 204 SUPERFAMILY SSF54364 10 81 5.89E-25 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 TF3313_2213 ad97e1bd04e0a756779049b38eebf147 204 Gene3D G3DSA:3.30.110.10 87 181 3.4E-31 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 TF3313_2213 ad97e1bd04e0a756779049b38eebf147 204 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 3 174 25.258 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 TF3313_2213 ad97e1bd04e0a756779049b38eebf147 204 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 12 173 4.5E-52 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 TF3313_2213 ad97e1bd04e0a756779049b38eebf147 204 Gene3D G3DSA:3.10.20.80 6 86 6.3E-29 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 TF3313_2213 ad97e1bd04e0a756779049b38eebf147 204 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 12 80 2.3E-28 T 11-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 TF3313_2213 ad97e1bd04e0a756779049b38eebf147 204 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 88 172 3.4E-32 T 11-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 TF3313_2213 ad97e1bd04e0a756779049b38eebf147 204 SUPERFAMILY SSF55200 87 174 5.62E-28 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 TF3313_1202 37534a6349dc6665bec4449ac4557750 199 PRINTS PR01011 Glutathione peroxidase family signature 41 58 5.3E-18 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 TF3313_1202 37534a6349dc6665bec4449ac4557750 199 PRINTS PR01011 Glutathione peroxidase family signature 76 92 5.3E-18 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 TF3313_1202 37534a6349dc6665bec4449ac4557750 199 PRINTS PR01011 Glutathione peroxidase family signature 163 172 5.3E-18 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 TF3313_1202 37534a6349dc6665bec4449ac4557750 199 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 79 86 - T 11-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 TF3313_1202 37534a6349dc6665bec4449ac4557750 199 ProSitePatterns PS00460 Glutathione peroxidases active site. 43 58 - T 11-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 TF3313_1202 37534a6349dc6665bec4449ac4557750 199 PIRSF PIRSF000303 1 199 9.2E-63 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 TF3313_1202 37534a6349dc6665bec4449ac4557750 199 Gene3D G3DSA:3.40.30.10 14 199 4.1E-71 T 11-10-2018 TF3313_1202 37534a6349dc6665bec4449ac4557750 199 Pfam PF00255 Glutathione peroxidase 23 130 8.2E-42 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 TF3313_1202 37534a6349dc6665bec4449ac4557750 199 SUPERFAMILY SSF52833 23 199 1.41E-56 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TF3313_0798 08f80e657cf41041973a69105e5609d1 783 Pfam PF01103 Surface antigen 482 781 7.0E-24 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 TF3313_0798 08f80e657cf41041973a69105e5609d1 783 Gene3D G3DSA:2.40.160.50 381 762 1.3E-22 T 11-10-2018 TF3313_2198 00bdf091098dafa5803924d3e23e9292 301 Pfam PF01545 Cation efflux family 14 212 6.9E-44 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TF3313_2198 00bdf091098dafa5803924d3e23e9292 301 Pfam PF16916 Dimerisation domain of Zinc Transporter 216 293 5.0E-25 T 11-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain TF3313_2198 00bdf091098dafa5803924d3e23e9292 301 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 295 8.3E-71 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TF3313_2198 00bdf091098dafa5803924d3e23e9292 301 Gene3D G3DSA:1.20.1510.10 7 212 2.9E-61 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily TF3313_2198 00bdf091098dafa5803924d3e23e9292 301 Gene3D G3DSA:3.30.70.1350 213 295 2.5E-23 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 TF3313_2198 00bdf091098dafa5803924d3e23e9292 301 SUPERFAMILY SSF161111 6 213 1.24E-51 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily TF3313_2198 00bdf091098dafa5803924d3e23e9292 301 SUPERFAMILY SSF160240 215 295 8.5E-22 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 TF3313_0572 6e136e022c49823aa14fd40bb7372ffa 80 Pfam PF13711 Domain of unknown function (DUF4160) 9 73 3.5E-20 T 11-10-2018 IPR025427 Protein of unknown function DUF4160 TF3313_1526 eb8ea79810ae905d42737eaf7975105a 985 Gene3D G3DSA:2.40.30.10 887 984 9.9E-33 T 11-10-2018 TF3313_1526 eb8ea79810ae905d42737eaf7975105a 985 SUPERFAMILY SSF52540 474 657 4.83E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1526 eb8ea79810ae905d42737eaf7975105a 985 ProSitePatterns PS01176 Initiation factor 2 signature. 936 958 - T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 TF3313_1526 eb8ea79810ae905d42737eaf7975105a 985 SUPERFAMILY SSF52156 767 892 5.75E-35 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily TF3313_1526 eb8ea79810ae905d42737eaf7975105a 985 Gene3D G3DSA:2.40.30.10 657 772 2.0E-37 T 11-10-2018 TF3313_1526 eb8ea79810ae905d42737eaf7975105a 985 Pfam PF00009 Elongation factor Tu GTP binding domain 489 645 3.9E-32 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TF3313_1526 eb8ea79810ae905d42737eaf7975105a 985 SUPERFAMILY SSF50447 887 983 1.96E-32 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TF3313_1526 eb8ea79810ae905d42737eaf7975105a 985 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 410 460 1.7E-12 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal TF3313_1526 eb8ea79810ae905d42737eaf7975105a 985 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 488 642 3.5E-30 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TF3313_1526 eb8ea79810ae905d42737eaf7975105a 985 Gene3D G3DSA:3.40.50.10050 781 886 1.9E-37 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily TF3313_1526 eb8ea79810ae905d42737eaf7975105a 985 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 35 983 16.915 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 TF3313_1526 eb8ea79810ae905d42737eaf7975105a 985 SUPERFAMILY SSF50447 658 740 4.16E-22 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TF3313_1526 eb8ea79810ae905d42737eaf7975105a 985 Gene3D G3DSA:3.40.50.300 483 656 1.5E-66 T 11-10-2018 TF3313_1526 eb8ea79810ae905d42737eaf7975105a 985 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 404 985 5.4E-244 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 TF3313_1526 eb8ea79810ae905d42737eaf7975105a 985 Pfam PF11987 Translation-initiation factor 2 783 875 3.0E-34 T 11-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 TF3313_1281 d39c1fdefbc1ff880e09bc762ab94cac 359 Pfam PF16344 Domain of unknown function (DUF4974) 232 326 8.4E-8 T 11-10-2018 IPR032508 Protein FecR, C-terminal TF3313_1281 d39c1fdefbc1ff880e09bc762ab94cac 359 Pfam PF04773 FecR protein 126 220 3.1E-18 T 11-10-2018 IPR006860 FecR protein TF3313_1281 d39c1fdefbc1ff880e09bc762ab94cac 359 PIRSF PIRSF018266 1 337 1.9E-56 T 11-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component TF3313_1281 d39c1fdefbc1ff880e09bc762ab94cac 359 Gene3D G3DSA:2.60.120.1440 109 257 6.1E-38 T 11-10-2018 TF3313_0109 00ca80fa055cc7ab83cc2911651d5098 321 SUPERFAMILY SSF55174 49 127 4.97E-7 T 11-10-2018 TF3313_0109 00ca80fa055cc7ab83cc2911651d5098 321 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 158 172 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 TF3313_0109 00ca80fa055cc7ab83cc2911651d5098 321 Gene3D G3DSA:3.30.2350.10 108 321 9.7E-56 T 11-10-2018 TF3313_0109 00ca80fa055cc7ab83cc2911651d5098 321 SUPERFAMILY SSF55120 105 320 5.76E-51 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TF3313_0109 00ca80fa055cc7ab83cc2911651d5098 321 Pfam PF01479 S4 domain 48 91 8.1E-5 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_0109 00ca80fa055cc7ab83cc2911651d5098 321 Pfam PF00849 RNA pseudouridylate synthase 116 265 6.2E-27 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TF3313_0109 00ca80fa055cc7ab83cc2911651d5098 321 Gene3D G3DSA:3.10.290.10 37 99 1.1E-5 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TF3313_2134 70359b4600ea0e1a81f9645497cef49d 332 SUPERFAMILY SSF46785 276 329 3.43E-6 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TF3313_2134 70359b4600ea0e1a81f9645497cef49d 332 Gene3D G3DSA:1.10.3290.10 12 258 3.1E-50 T 11-10-2018 IPR036597 Fido-like domain superfamily TF3313_2134 70359b4600ea0e1a81f9645497cef49d 332 Pfam PF13412 Winged helix-turn-helix DNA-binding 276 317 9.0E-6 T 11-10-2018 TF3313_2134 70359b4600ea0e1a81f9645497cef49d 332 SUPERFAMILY SSF140931 77 249 8.37E-40 T 11-10-2018 IPR036597 Fido-like domain superfamily TF3313_2134 70359b4600ea0e1a81f9645497cef49d 332 Pfam PF02661 Fic/DOC family 97 195 8.4E-23 T 11-10-2018 IPR003812 Fido domain TF3313_1816 4de066d40062070a4ece39763373b3fc 296 Pfam PF01609 Transposase DDE domain 128 257 1.8E-9 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 TF3313_1816 4de066d40062070a4ece39763373b3fc 296 SUPERFAMILY SSF53098 132 284 1.67E-5 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TF3313_1816 4de066d40062070a4ece39763373b3fc 296 Pfam PF14294 Domain of unknown function (DUF4372) 11 78 1.7E-20 T 11-10-2018 IPR025399 Domain of unknown function DUF4372 TF3313_1799 8f795294ba63d69ca5f77ae49f5f0f7f 230 Pfam PF07715 TonB-dependent Receptor Plug Domain 14 85 6.1E-14 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_1799 8f795294ba63d69ca5f77ae49f5f0f7f 230 SUPERFAMILY SSF56935 1 189 7.78E-40 T 11-10-2018 TF3313_1799 8f795294ba63d69ca5f77ae49f5f0f7f 230 Gene3D G3DSA:2.40.170.20 97 195 3.2E-6 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_1799 8f795294ba63d69ca5f77ae49f5f0f7f 230 Gene3D G3DSA:2.170.130.10 1 96 2.6E-20 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_0764 08ac71b1fd9f1cb69b154d6f5d68ea08 224 PIRSF PIRSF028451 1 221 1.0E-63 T 11-10-2018 IPR015996 Uncharacterised conserved protein UCP028451 TF3313_0764 08ac71b1fd9f1cb69b154d6f5d68ea08 224 Pfam PF09365 Conserved hypothetical protein (DUF2461) 6 212 2.5E-69 T 11-10-2018 IPR012808 Conserved hypothetical protein CHP02453 TF3313_0764 08ac71b1fd9f1cb69b154d6f5d68ea08 224 TIGRFAM TIGR02453 TIGR02453: TIGR02453 family protein 2 217 2.4E-66 T 11-10-2018 IPR012808 Conserved hypothetical protein CHP02453 TF3313_0263 48b2f11b5f2bee77afa95e78a312e873 597 SUPERFAMILY SSF50443 361 595 1.12E-125 T 11-10-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal TF3313_0263 48b2f11b5f2bee77afa95e78a312e873 597 Gene3D G3DSA:3.40.275.10 180 345 1.7E-78 T 11-10-2018 IPR038392 L-fucose isomerase, domain 2 superfamily KEGG: 00051+5.3.1.25 TF3313_0263 48b2f11b5f2bee77afa95e78a312e873 597 TIGRFAM TIGR01089 fucI: L-fucose isomerase 10 594 0.0 T 11-10-2018 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25 TF3313_0263 48b2f11b5f2bee77afa95e78a312e873 597 Pfam PF02952 L-fucose isomerase, C-terminal domain 395 559 1.5E-54 T 11-10-2018 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 TF3313_0263 48b2f11b5f2bee77afa95e78a312e873 597 Pfam PF07881 L-fucose isomerase, first N-terminal domain 11 178 1.6E-82 T 11-10-2018 IPR012888 L-fucose isomerase, N-terminal-1 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 TF3313_0263 48b2f11b5f2bee77afa95e78a312e873 597 Gene3D G3DSA:3.40.50.1070 1 179 2.9E-91 T 11-10-2018 IPR038391 L-fucose isomerase, domain 1 superfamily KEGG: 00051+5.3.1.25 TF3313_0263 48b2f11b5f2bee77afa95e78a312e873 597 Pfam PF07882 L-fucose isomerase, second N-terminal domain 179 359 1.9E-92 T 11-10-2018 IPR012889 L-fucose isomerase, N-terminal-2 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 TF3313_0263 48b2f11b5f2bee77afa95e78a312e873 597 Hamap MF_01254 L-fucose isomerase [fucI]. 7 596 70.194 T 11-10-2018 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25 TF3313_0263 48b2f11b5f2bee77afa95e78a312e873 597 Gene3D G3DSA:3.20.14.10 346 596 1.2E-131 T 11-10-2018 IPR038393 L-fucose isomerase, domain 3 superfamily KEGG: 00051+5.3.1.25 TF3313_0263 48b2f11b5f2bee77afa95e78a312e873 597 SUPERFAMILY SSF53743 9 360 5.49E-142 T 11-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 TF3313_2730 401ccef1bad0104c00e1445aaee06624 615 Pfam PF00664 ABC transporter transmembrane region 22 326 5.2E-41 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TF3313_2730 401ccef1bad0104c00e1445aaee06624 615 SUPERFAMILY SSF52540 371 613 2.98E-90 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2730 401ccef1bad0104c00e1445aaee06624 615 Gene3D G3DSA:1.20.1560.10 76 362 8.5E-63 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TF3313_2730 401ccef1bad0104c00e1445aaee06624 615 ProSitePatterns PS00211 ABC transporters family signature. 515 529 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TF3313_2730 401ccef1bad0104c00e1445aaee06624 615 SMART SM00382 403 589 3.0E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_2730 401ccef1bad0104c00e1445aaee06624 615 SUPERFAMILY SSF90123 6 359 4.97E-63 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TF3313_2730 401ccef1bad0104c00e1445aaee06624 615 Gene3D G3DSA:3.40.50.300 369 615 1.4E-87 T 11-10-2018 TF3313_2730 401ccef1bad0104c00e1445aaee06624 615 Pfam PF00005 ABC transporter 394 543 4.0E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TF3313_2562 836074dc9d1e8be6f874de03b57b6c74 189 Pfam PF04542 Sigma-70 region 2 17 81 4.9E-15 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_2562 836074dc9d1e8be6f874de03b57b6c74 189 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 13 173 1.2E-54 T 11-10-2018 IPR014327 RNA polymerase sigma-70, Bacteroidetes type TF3313_2562 836074dc9d1e8be6f874de03b57b6c74 189 SUPERFAMILY SSF88946 8 92 4.51E-19 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_2562 836074dc9d1e8be6f874de03b57b6c74 189 Pfam PF08281 Sigma-70, region 4 119 168 1.4E-14 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TF3313_2562 836074dc9d1e8be6f874de03b57b6c74 189 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 171 7.7E-27 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TF3313_2562 836074dc9d1e8be6f874de03b57b6c74 189 Gene3D G3DSA:1.10.10.10 97 176 7.7E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_2562 836074dc9d1e8be6f874de03b57b6c74 189 SUPERFAMILY SSF88659 107 174 2.83E-13 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TF3313_2562 836074dc9d1e8be6f874de03b57b6c74 189 Gene3D G3DSA:1.10.1740.10 4 96 1.7E-14 T 11-10-2018 TF3313_2719 83d9c8fdf7fde7303a5383529ec30c7f 139 PIRSF PIRSF016821 3 128 6.0E-46 T 11-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 TF3313_2719 83d9c8fdf7fde7303a5383529ec30c7f 139 SUPERFAMILY SSF55174 3 100 3.27E-22 T 11-10-2018 TF3313_2719 83d9c8fdf7fde7303a5383529ec30c7f 139 Gene3D G3DSA:3.10.290.10 1 100 2.8E-28 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TF3313_2719 83d9c8fdf7fde7303a5383529ec30c7f 139 Pfam PF01479 S4 domain 6 52 1.8E-5 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_2710 955382e0c22da7f008ba7d6dcbe9d34f 696 SUPERFAMILY SSF82171 51 431 4.71E-45 T 11-10-2018 TF3313_2710 955382e0c22da7f008ba7d6dcbe9d34f 696 Gene3D G3DSA:2.130.10.10 199 309 4.8E-8 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TF3313_2710 955382e0c22da7f008ba7d6dcbe9d34f 696 Gene3D G3DSA:2.120.10.30 310 424 2.3E-6 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TF3313_2710 955382e0c22da7f008ba7d6dcbe9d34f 696 SUPERFAMILY SSF53474 436 694 6.77E-67 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TF3313_2710 955382e0c22da7f008ba7d6dcbe9d34f 696 Gene3D G3DSA:2.120.10.30 35 174 1.2E-17 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TF3313_2710 955382e0c22da7f008ba7d6dcbe9d34f 696 Gene3D G3DSA:3.40.50.1820 425 696 8.5E-64 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TF3313_2710 955382e0c22da7f008ba7d6dcbe9d34f 696 Pfam PF00326 Prolyl oligopeptidase family 483 695 1.5E-54 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 TF3313_2710 955382e0c22da7f008ba7d6dcbe9d34f 696 Pfam PF07676 WD40-like Beta Propeller Repeat 237 251 0.0062 T 11-10-2018 IPR011659 WD40-like Beta Propeller TF3313_2710 955382e0c22da7f008ba7d6dcbe9d34f 696 Pfam PF07676 WD40-like Beta Propeller Repeat 96 124 0.16 T 11-10-2018 IPR011659 WD40-like Beta Propeller TF3313_2710 955382e0c22da7f008ba7d6dcbe9d34f 696 Pfam PF07676 WD40-like Beta Propeller Repeat 286 311 1.9E-4 T 11-10-2018 IPR011659 WD40-like Beta Propeller TF3313_0027 e59b021c1248f803c3c0da1fc2845cd6 299 SUPERFAMILY SSF103481 200 297 4.84E-8 T 11-10-2018 TF3313_0027 e59b021c1248f803c3c0da1fc2845cd6 299 SUPERFAMILY SSF103481 39 149 3.01E-10 T 11-10-2018 TF3313_0027 e59b021c1248f803c3c0da1fc2845cd6 299 Pfam PF00892 EamA-like transporter family 2 144 7.9E-12 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TF3313_0027 e59b021c1248f803c3c0da1fc2845cd6 299 Pfam PF00892 EamA-like transporter family 158 295 1.4E-9 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TF3313_1570 86f2aaa2780b2bdcba50c5a4356ad88a 1080 Gene3D G3DSA:2.60.40.1120 113 183 6.9E-9 T 11-10-2018 TF3313_1570 86f2aaa2780b2bdcba50c5a4356ad88a 1080 SUPERFAMILY SSF49464 112 192 7.46E-20 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_1570 86f2aaa2780b2bdcba50c5a4356ad88a 1080 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 114 1080 3.4E-245 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_1570 86f2aaa2780b2bdcba50c5a4356ad88a 1080 Gene3D G3DSA:2.170.130.10 184 315 1.2E-25 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_1570 86f2aaa2780b2bdcba50c5a4356ad88a 1080 Pfam PF13715 CarboxypepD_reg-like domain 114 194 1.7E-19 T 11-10-2018 TF3313_1570 86f2aaa2780b2bdcba50c5a4356ad88a 1080 Pfam PF00593 TonB dependent receptor 463 1079 1.3E-29 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_1570 86f2aaa2780b2bdcba50c5a4356ad88a 1080 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 286 316 1.5E-16 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_1570 86f2aaa2780b2bdcba50c5a4356ad88a 1080 SUPERFAMILY SSF56935 190 1078 1.25E-84 T 11-10-2018 TF3313_1570 86f2aaa2780b2bdcba50c5a4356ad88a 1080 Pfam PF07715 TonB-dependent Receptor Plug Domain 202 310 9.6E-16 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_0209 f11e6e4e546d9eac080acfa8495837d1 221 Pfam PF01168 Alanine racemase, N-terminal domain 9 218 6.7E-21 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TF3313_0209 f11e6e4e546d9eac080acfa8495837d1 221 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 16 219 8.1E-55 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 TF3313_0209 f11e6e4e546d9eac080acfa8495837d1 221 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 5 218 28.871 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 TF3313_0209 f11e6e4e546d9eac080acfa8495837d1 221 SUPERFAMILY SSF51419 1 217 6.15E-71 T 11-10-2018 IPR029066 PLP-binding barrel TF3313_0209 f11e6e4e546d9eac080acfa8495837d1 221 Gene3D G3DSA:3.20.20.10 1 221 3.6E-78 T 11-10-2018 IPR029066 PLP-binding barrel TF3313_0209 f11e6e4e546d9eac080acfa8495837d1 221 PIRSF PIRSF004848 1 221 4.8E-72 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 TF3313_0209 f11e6e4e546d9eac080acfa8495837d1 221 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 64 78 - T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 TF3313_1371 ee57bcdf9662b794193f13461acf2a2f 221 Pfam PF00574 Clp protease 45 220 1.2E-77 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA TF3313_1371 ee57bcdf9662b794193f13461acf2a2f 221 Gene3D G3DSA:3.90.226.10 16 221 1.4E-75 T 11-10-2018 TF3313_1371 ee57bcdf9662b794193f13461acf2a2f 221 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 140 153 - T 11-10-2018 IPR033135 ClpP, histidine active site TF3313_1371 ee57bcdf9662b794193f13461acf2a2f 221 SUPERFAMILY SSF52096 41 219 2.09E-67 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TF3313_1371 ee57bcdf9662b794193f13461acf2a2f 221 PRINTS PR00127 Clp protease catalytic subunit P signature 139 158 4.3E-48 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TF3313_1371 ee57bcdf9662b794193f13461acf2a2f 221 PRINTS PR00127 Clp protease catalytic subunit P signature 118 135 4.3E-48 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TF3313_1371 ee57bcdf9662b794193f13461acf2a2f 221 PRINTS PR00127 Clp protease catalytic subunit P signature 196 215 4.3E-48 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TF3313_1371 ee57bcdf9662b794193f13461acf2a2f 221 PRINTS PR00127 Clp protease catalytic subunit P signature 87 107 4.3E-48 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TF3313_1371 ee57bcdf9662b794193f13461acf2a2f 221 PRINTS PR00127 Clp protease catalytic subunit P signature 47 62 4.3E-48 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TF3313_1371 ee57bcdf9662b794193f13461acf2a2f 221 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 31 221 40.819 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TF3313_2320 c26777ef7f97796a3c5fe1a5b3a93ebd 957 Gene3D G3DSA:3.40.50.300 626 946 1.2E-137 T 11-10-2018 TF3313_2320 c26777ef7f97796a3c5fe1a5b3a93ebd 957 Gene3D G3DSA:1.20.1580.10 104 504 1.1E-221 T 11-10-2018 TF3313_2320 c26777ef7f97796a3c5fe1a5b3a93ebd 957 SUPERFAMILY SSF52540 23 581 4.3E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2320 c26777ef7f97796a3c5fe1a5b3a93ebd 957 SUPERFAMILY SSF52540 631 922 5.62E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2320 c26777ef7f97796a3c5fe1a5b3a93ebd 957 Gene3D G3DSA:1.10.8.280 299 413 1.1E-221 T 11-10-2018 TF3313_2320 c26777ef7f97796a3c5fe1a5b3a93ebd 957 ProSitePatterns PS00211 ABC transporters family signature. 839 853 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TF3313_2320 c26777ef7f97796a3c5fe1a5b3a93ebd 957 Gene3D G3DSA:3.30.190.20 144 255 1.1E-221 T 11-10-2018 TF3313_2320 c26777ef7f97796a3c5fe1a5b3a93ebd 957 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 18 933 0.0 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 TF3313_2320 c26777ef7f97796a3c5fe1a5b3a93ebd 957 Gene3D G3DSA:3.40.50.300 20 606 1.1E-221 T 11-10-2018 TF3313_2320 c26777ef7f97796a3c5fe1a5b3a93ebd 957 ProSitePatterns PS00211 ABC transporters family signature. 499 513 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TF3313_2320 c26777ef7f97796a3c5fe1a5b3a93ebd 957 Gene3D G3DSA:1.20.1580.10 701 839 1.2E-137 T 11-10-2018 TF3313_0128 b29b5bc3251945d73e949f53459a99c3 417 Pfam PF13437 HlyD family secretion protein 234 315 4.3E-9 T 11-10-2018 TF3313_0128 b29b5bc3251945d73e949f53459a99c3 417 SUPERFAMILY SSF111369 64 139 2.09E-7 T 11-10-2018 TF3313_0128 b29b5bc3251945d73e949f53459a99c3 417 Gene3D G3DSA:2.40.30.170 61 340 8.3E-46 T 11-10-2018 TF3313_0128 b29b5bc3251945d73e949f53459a99c3 417 Gene3D G3DSA:2.40.420.20 60 401 8.3E-46 T 11-10-2018 TF3313_0128 b29b5bc3251945d73e949f53459a99c3 417 Gene3D G3DSA:1.10.287.470 106 233 8.3E-46 T 11-10-2018 TF3313_0128 b29b5bc3251945d73e949f53459a99c3 417 Pfam PF13533 Biotin-lipoyl like 73 121 4.9E-6 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain TF3313_0128 b29b5bc3251945d73e949f53459a99c3 417 Gene3D G3DSA:2.40.50.100 72 267 8.3E-46 T 11-10-2018 TF3313_2237 4b22eef25d50c17daab59990cb3c7baa 412 Pfam PF13439 Glycosyltransferase Family 4 21 206 5.3E-8 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 TF3313_2237 4b22eef25d50c17daab59990cb3c7baa 412 SUPERFAMILY SSF53756 20 407 2.3E-29 T 11-10-2018 TF3313_2237 4b22eef25d50c17daab59990cb3c7baa 412 Gene3D G3DSA:3.40.50.2000 218 393 1.3E-8 T 11-10-2018 TF3313_2237 4b22eef25d50c17daab59990cb3c7baa 412 Gene3D G3DSA:3.40.50.2000 3 217 1.7E-13 T 11-10-2018 TF3313_0564 706ceda2ad66e641f39c7ea3f223abae 193 Pfam PF09374 Predicted Peptidoglycan domain 119 186 1.4E-18 T 11-10-2018 IPR018537 Peptidoglycan binding domain TF3313_0564 706ceda2ad66e641f39c7ea3f223abae 193 SUPERFAMILY SSF53955 2 189 1.29E-39 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily TF3313_0564 706ceda2ad66e641f39c7ea3f223abae 193 Pfam PF05838 Glycosyl hydrolase 108 11 117 4.1E-14 T 11-10-2018 IPR008565 Protein of unknown function DUF847 TF3313_0564 706ceda2ad66e641f39c7ea3f223abae 193 Gene3D G3DSA:1.20.141.10 33 191 3.2E-45 T 11-10-2018 TF3313_1169 5296be68d48d7b3703d73dccf681fbde 672 Gene3D G3DSA:1.25.40.10 28 162 5.9E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1169 5296be68d48d7b3703d73dccf681fbde 672 SUPERFAMILY SSF82171 199 380 1.06E-10 T 11-10-2018 TF3313_1169 5296be68d48d7b3703d73dccf681fbde 672 Pfam PF13176 Tetratricopeptide repeat 111 142 1.4E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1169 5296be68d48d7b3703d73dccf681fbde 672 Pfam PF00691 OmpA family 536 617 3.8E-21 T 11-10-2018 IPR006665 OmpA-like domain TF3313_1169 5296be68d48d7b3703d73dccf681fbde 672 SUPERFAMILY SSF103088 531 664 8.11E-30 T 11-10-2018 IPR036737 OmpA-like domain superfamily TF3313_1169 5296be68d48d7b3703d73dccf681fbde 672 Gene3D G3DSA:2.120.10.30 214 361 1.8E-8 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TF3313_1169 5296be68d48d7b3703d73dccf681fbde 672 SUPERFAMILY SSF48452 44 156 2.66E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1169 5296be68d48d7b3703d73dccf681fbde 672 PRINTS PR01021 OMPA domain signature 537 559 1.2E-17 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TF3313_1169 5296be68d48d7b3703d73dccf681fbde 672 PRINTS PR01021 OMPA domain signature 582 598 1.2E-17 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TF3313_1169 5296be68d48d7b3703d73dccf681fbde 672 PRINTS PR01021 OMPA domain signature 567 582 1.2E-17 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TF3313_1169 5296be68d48d7b3703d73dccf681fbde 672 Gene3D G3DSA:2.60.40.1120 443 534 6.2E-6 T 11-10-2018 TF3313_1169 5296be68d48d7b3703d73dccf681fbde 672 SMART SM00028 108 141 0.023 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1169 5296be68d48d7b3703d73dccf681fbde 672 SMART SM00028 74 107 43.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1169 5296be68d48d7b3703d73dccf681fbde 672 SUPERFAMILY SSF49464 443 527 7.45E-6 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_1169 5296be68d48d7b3703d73dccf681fbde 672 Gene3D G3DSA:3.30.1330.60 535 629 5.5E-31 T 11-10-2018 IPR036737 OmpA-like domain superfamily TF3313_1169 5296be68d48d7b3703d73dccf681fbde 672 Pfam PF07676 WD40-like Beta Propeller Repeat 235 258 0.0015 T 11-10-2018 IPR011659 WD40-like Beta Propeller TF3313_1169 5296be68d48d7b3703d73dccf681fbde 672 Pfam PF07676 WD40-like Beta Propeller Repeat 301 327 3.2E-4 T 11-10-2018 IPR011659 WD40-like Beta Propeller TF3313_2406 2d7b77dac425cbf944e5b6952703877b 601 PIRSF PIRSF037677 336 592 3.2E-28 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 TF3313_2406 2d7b77dac425cbf944e5b6952703877b 601 PIRSF PIRSF037677 120 185 1.7E-7 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 TF3313_2406 2d7b77dac425cbf944e5b6952703877b 601 SUPERFAMILY SSF48334 128 381 2.75E-13 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily TF3313_2406 2d7b77dac425cbf944e5b6952703877b 601 Gene3D G3DSA:1.10.1420.10 115 209 9.4E-10 T 11-10-2018 TF3313_2406 2d7b77dac425cbf944e5b6952703877b 601 Pfam PF05192 MutS domain III 127 374 1.5E-11 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 TF3313_2406 2d7b77dac425cbf944e5b6952703877b 601 Gene3D G3DSA:3.40.50.300 384 600 1.5E-48 T 11-10-2018 TF3313_2406 2d7b77dac425cbf944e5b6952703877b 601 SMART SM00534 422 601 1.3E-12 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TF3313_2406 2d7b77dac425cbf944e5b6952703877b 601 SUPERFAMILY SSF52540 384 598 1.71E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2406 2d7b77dac425cbf944e5b6952703877b 601 Pfam PF00488 MutS domain V 425 584 2.7E-26 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TF3313_1217 973605ab806cf7b1ec48d62fd0048687 310 SUPERFAMILY SSF50182 100 174 1.96E-9 T 11-10-2018 IPR010920 LSM domain superfamily TF3313_1217 973605ab806cf7b1ec48d62fd0048687 310 Pfam PF00924 Mechanosensitive ion channel 60 208 2.9E-22 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 TF3313_2051 d2f41a62fb453db3cc041a096bec9c36 439 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 335 415 1.2E-13 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain TF3313_2051 d2f41a62fb453db3cc041a096bec9c36 439 Gene3D G3DSA:3.20.20.70 84 436 5.6E-54 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_2051 d2f41a62fb453db3cc041a096bec9c36 439 SUPERFAMILY SSF102114 84 406 1.44E-41 T 11-10-2018 TF3313_2051 d2f41a62fb453db3cc041a096bec9c36 439 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 91 102 - T 11-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TF3313_2051 d2f41a62fb453db3cc041a096bec9c36 439 Pfam PF13353 4Fe-4S single cluster domain 90 212 3.7E-14 T 11-10-2018 TF3313_2051 d2f41a62fb453db3cc041a096bec9c36 439 Pfam PF04055 Radical SAM superfamily 90 239 1.6E-10 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TF3313_2280 3f10829890e8bfe314c72ed6732587ed 526 Gene3D G3DSA:2.70.70.10 114 248 1.5E-37 T 11-10-2018 IPR011055 Duplicated hybrid motif TF3313_2280 3f10829890e8bfe314c72ed6732587ed 526 Pfam PF01551 Peptidase family M23 146 241 2.5E-28 T 11-10-2018 IPR016047 Peptidase M23 TF3313_2280 3f10829890e8bfe314c72ed6732587ed 526 SUPERFAMILY SSF54106 357 400 9.81E-9 T 11-10-2018 TF3313_2280 3f10829890e8bfe314c72ed6732587ed 526 SUPERFAMILY SSF54106 279 322 5.75E-9 T 11-10-2018 TF3313_2280 3f10829890e8bfe314c72ed6732587ed 526 SUPERFAMILY SSF51261 116 244 9.42E-45 T 11-10-2018 IPR011055 Duplicated hybrid motif TF3313_2280 3f10829890e8bfe314c72ed6732587ed 526 Pfam PF01476 LysM domain 359 400 1.6E-10 T 11-10-2018 IPR018392 LysM domain TF3313_2280 3f10829890e8bfe314c72ed6732587ed 526 Pfam PF01476 LysM domain 483 523 9.6E-12 T 11-10-2018 IPR018392 LysM domain TF3313_2280 3f10829890e8bfe314c72ed6732587ed 526 Pfam PF01476 LysM domain 281 322 7.7E-10 T 11-10-2018 IPR018392 LysM domain TF3313_2280 3f10829890e8bfe314c72ed6732587ed 526 Gene3D G3DSA:3.10.350.10 466 526 1.9E-13 T 11-10-2018 IPR036779 LysM domain superfamily TF3313_2280 3f10829890e8bfe314c72ed6732587ed 526 Gene3D G3DSA:3.10.350.10 267 335 3.6E-13 T 11-10-2018 IPR036779 LysM domain superfamily TF3313_2280 3f10829890e8bfe314c72ed6732587ed 526 Gene3D G3DSA:3.10.350.10 345 414 2.4E-13 T 11-10-2018 IPR036779 LysM domain superfamily TF3313_2280 3f10829890e8bfe314c72ed6732587ed 526 SMART SM00257 280 324 1.3E-10 T 11-10-2018 IPR018392 LysM domain TF3313_2280 3f10829890e8bfe314c72ed6732587ed 526 SMART SM00257 358 402 9.7E-8 T 11-10-2018 IPR018392 LysM domain TF3313_2280 3f10829890e8bfe314c72ed6732587ed 526 SMART SM00257 482 526 5.0E-12 T 11-10-2018 IPR018392 LysM domain TF3313_2280 3f10829890e8bfe314c72ed6732587ed 526 SUPERFAMILY SSF54106 481 524 3.14E-9 T 11-10-2018 TF3313_0087 5150fdeba359f3bc4ac6c3b3f463bdd2 254 Pfam PF02709 N-terminal domain of galactosyltransferase 157 207 5.4E-9 T 11-10-2018 IPR027791 Galactosyltransferase, C-terminal Reactome: R-HSA-2022854|Reactome: R-HSA-975577 TF3313_0087 5150fdeba359f3bc4ac6c3b3f463bdd2 254 Gene3D G3DSA:3.90.550.10 3 249 2.3E-14 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_0087 5150fdeba359f3bc4ac6c3b3f463bdd2 254 SUPERFAMILY SSF53448 7 246 7.03E-15 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_0116 863a0236a34acae046398c296fa991ed 138 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 11-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site TF3313_0116 863a0236a34acae046398c296fa991ed 138 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 137 24.198 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 TF3313_0116 863a0236a34acae046398c296fa991ed 138 Gene3D G3DSA:1.10.1200.120 3 138 6.4E-41 T 11-10-2018 IPR036019 Gated mechanosensitive channel TF3313_0116 863a0236a34acae046398c296fa991ed 138 SUPERFAMILY SSF81330 12 132 4.32E-34 T 11-10-2018 IPR036019 Gated mechanosensitive channel TF3313_0116 863a0236a34acae046398c296fa991ed 138 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 98 107 6.9E-12 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 TF3313_0116 863a0236a34acae046398c296fa991ed 138 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 89 97 6.9E-12 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 TF3313_0116 863a0236a34acae046398c296fa991ed 138 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 6.9E-12 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 TF3313_0116 863a0236a34acae046398c296fa991ed 138 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 137 7.5E-48 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 TF3313_0116 863a0236a34acae046398c296fa991ed 138 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 136 3.0E-43 T 11-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L TF3313_0936 fabee2087d9841d40b9829dea512945e 209 SUPERFAMILY SSF53271 4 207 3.41E-74 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like TF3313_0936 fabee2087d9841d40b9829dea512945e 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 209 3.3E-89 T 11-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 TF3313_0936 fabee2087d9841d40b9829dea512945e 209 Pfam PF14681 Uracil phosphoribosyltransferase 7 208 8.4E-75 T 11-10-2018 TF3313_0936 fabee2087d9841d40b9829dea512945e 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 209 47.17 T 11-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 TF3313_0936 fabee2087d9841d40b9829dea512945e 209 Gene3D G3DSA:3.40.50.2020 1 209 1.2E-83 T 11-10-2018 TF3313_1874 a584a658d0c6b3d1ab50549bd69ea539 706 SMART SM00316 634 705 9.3E-21 T 11-10-2018 IPR022967 RNA-binding domain, S1 TF3313_1874 a584a658d0c6b3d1ab50549bd69ea539 706 Gene3D G3DSA:1.10.3500.10 112 483 3.0E-146 T 11-10-2018 IPR023323 Tex-like domain superfamily TF3313_1874 a584a658d0c6b3d1ab50549bd69ea539 706 Gene3D G3DSA:2.40.50.140 618 705 5.0E-23 T 11-10-2018 TF3313_1874 a584a658d0c6b3d1ab50549bd69ea539 706 Gene3D G3DSA:3.30.420.140 312 436 3.0E-146 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 TF3313_1874 a584a658d0c6b3d1ab50549bd69ea539 706 SMART SM00732 313 409 2.4E-28 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 TF3313_1874 a584a658d0c6b3d1ab50549bd69ea539 706 SUPERFAMILY SSF50249 623 704 4.1E-21 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TF3313_1874 a584a658d0c6b3d1ab50549bd69ea539 706 SUPERFAMILY SSF47781 545 616 2.16E-20 T 11-10-2018 IPR010994 RuvA domain 2-like TF3313_1874 a584a658d0c6b3d1ab50549bd69ea539 706 SUPERFAMILY SSF158832 5 308 3.53E-107 T 11-10-2018 TF3313_1874 a584a658d0c6b3d1ab50549bd69ea539 706 Pfam PF16921 Tex protein YqgF-like domain 313 435 3.5E-48 T 11-10-2018 IPR032639 Tex protein, YqgF-like domain TF3313_1874 a584a658d0c6b3d1ab50549bd69ea539 706 Pfam PF00575 S1 RNA binding domain 635 704 1.2E-18 T 11-10-2018 IPR003029 S1 domain GO:0003676 TF3313_1874 a584a658d0c6b3d1ab50549bd69ea539 706 SUPERFAMILY SSF47781 455 542 6.78E-27 T 11-10-2018 IPR010994 RuvA domain 2-like TF3313_1874 a584a658d0c6b3d1ab50549bd69ea539 706 Gene3D G3DSA:1.10.150.310 484 615 3.8E-46 T 11-10-2018 TF3313_1874 a584a658d0c6b3d1ab50549bd69ea539 706 Pfam PF12836 Helix-hairpin-helix motif 476 540 4.9E-26 T 11-10-2018 TF3313_1874 a584a658d0c6b3d1ab50549bd69ea539 706 Pfam PF09371 Tex-like protein N-terminal domain 9 189 4.8E-67 T 11-10-2018 IPR018974 Tex-like protein, N-terminal TF3313_1874 a584a658d0c6b3d1ab50549bd69ea539 706 Gene3D G3DSA:1.10.10.650 3 109 7.6E-37 T 11-10-2018 IPR023319 Tex-like protein, HTH domain superfamily TF3313_1874 a584a658d0c6b3d1ab50549bd69ea539 706 SUPERFAMILY SSF53098 309 454 8.34E-48 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TF3313_1028 af4d182d19cc1ec7627a74258ba2913f 601 SUPERFAMILY SSF82771 18 101 4.05E-24 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 TF3313_1028 af4d182d19cc1ec7627a74258ba2913f 601 Gene3D G3DSA:3.40.1440.10 6 103 5.5E-34 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 TF3313_1028 af4d182d19cc1ec7627a74258ba2913f 601 Pfam PF01541 GIY-YIG catalytic domain 19 94 4.6E-12 T 11-10-2018 IPR000305 GIY-YIG endonuclease TF3313_1028 af4d182d19cc1ec7627a74258ba2913f 601 SUPERFAMILY SSF47781 493 600 6.04E-18 T 11-10-2018 IPR010994 RuvA domain 2-like TF3313_1028 af4d182d19cc1ec7627a74258ba2913f 601 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 10 580 2.8E-161 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 TF3313_1028 af4d182d19cc1ec7627a74258ba2913f 601 SMART SM00465 18 99 4.2E-24 T 11-10-2018 IPR000305 GIY-YIG endonuclease TF3313_1028 af4d182d19cc1ec7627a74258ba2913f 601 SUPERFAMILY SSF46600 197 244 3.4E-5 T 11-10-2018 IPR036876 UVR domain superfamily TF3313_1028 af4d182d19cc1ec7627a74258ba2913f 601 Hamap MF_00203 UvrABC system protein C [uvrC]. 5 597 25.974 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 TF3313_1028 af4d182d19cc1ec7627a74258ba2913f 601 Gene3D G3DSA:3.30.420.340 376 540 2.2E-58 T 11-10-2018 IPR038476 UvrC homology region 2 superfamily TF3313_1028 af4d182d19cc1ec7627a74258ba2913f 601 Gene3D G3DSA:1.10.150.20 541 594 5.1E-15 T 11-10-2018 TF3313_1028 af4d182d19cc1ec7627a74258ba2913f 601 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 383 533 3.8E-53 T 11-10-2018 IPR001162 UvrC family homology region TF3313_0232 9d22994c763b469023b982b726c0c91f 203 SUPERFAMILY SSF52172 1 130 3.27E-27 T 11-10-2018 IPR011006 CheY-like superfamily TF3313_0232 9d22994c763b469023b982b726c0c91f 203 SMART SM00421 140 197 1.7E-18 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TF3313_0232 9d22994c763b469023b982b726c0c91f 203 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TF3313_0232 9d22994c763b469023b982b726c0c91f 203 Gene3D G3DSA:3.40.50.12740 2 203 1.4E-52 T 11-10-2018 TF3313_0232 9d22994c763b469023b982b726c0c91f 203 SMART SM00448 2 115 1.9E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TF3313_0232 9d22994c763b469023b982b726c0c91f 203 Pfam PF00072 Response regulator receiver domain 4 113 9.0E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TF3313_0232 9d22994c763b469023b982b726c0c91f 203 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 197 1.9E-17 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TF3313_0232 9d22994c763b469023b982b726c0c91f 203 SUPERFAMILY SSF46894 136 202 3.33E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TF3313_0232 9d22994c763b469023b982b726c0c91f 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 2.9E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TF3313_0232 9d22994c763b469023b982b726c0c91f 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 2.9E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TF3313_0232 9d22994c763b469023b982b726c0c91f 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 2.9E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TF3313_2175 856f4b07578b6232a0ac1e89ee0921fd 378 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 6 376 6.1E-152 T 11-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 TF3313_2175 856f4b07578b6232a0ac1e89ee0921fd 378 SUPERFAMILY SSF50621 214 367 1.61E-29 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TF3313_2175 856f4b07578b6232a0ac1e89ee0921fd 378 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 97 334 1.8E-12 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 TF3313_2175 856f4b07578b6232a0ac1e89ee0921fd 378 SUPERFAMILY SSF51419 15 248 6.21E-47 T 11-10-2018 IPR029066 PLP-binding barrel TF3313_2175 856f4b07578b6232a0ac1e89ee0921fd 378 Gene3D G3DSA:2.40.37.10 6 373 2.6E-149 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TF3313_2175 856f4b07578b6232a0ac1e89ee0921fd 378 PIRSF PIRSF038941 1 378 2.0E-155 T 11-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 TF3313_2175 856f4b07578b6232a0ac1e89ee0921fd 378 Gene3D G3DSA:3.20.20.10 15 245 2.6E-149 T 11-10-2018 IPR029066 PLP-binding barrel TF3313_2196 dcccc829c30643e75fc3b2e6b4f7991c 436 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 141 156 - T 11-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 TF3313_2196 dcccc829c30643e75fc3b2e6b4f7991c 436 TIGRFAM TIGR01499 folC: bifunctional protein FolC 30 429 2.6E-109 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 TF3313_2196 dcccc829c30643e75fc3b2e6b4f7991c 436 Gene3D G3DSA:3.90.190.20 300 430 9.0E-25 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TF3313_2196 dcccc829c30643e75fc3b2e6b4f7991c 436 SUPERFAMILY SSF53623 1 292 7.56E-81 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TF3313_2196 dcccc829c30643e75fc3b2e6b4f7991c 436 Pfam PF08245 Mur ligase middle domain 51 266 2.8E-14 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TF3313_2196 dcccc829c30643e75fc3b2e6b4f7991c 436 PIRSF PIRSF001563 1 436 4.6E-114 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 TF3313_2196 dcccc829c30643e75fc3b2e6b4f7991c 436 SUPERFAMILY SSF53244 299 430 7.88E-22 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TF3313_2196 dcccc829c30643e75fc3b2e6b4f7991c 436 Gene3D G3DSA:3.40.1190.10 1 293 1.1E-87 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TF3313_0641 104bf6899aef6d71383dc473c1adab3b 525 Gene3D G3DSA:3.40.50.300 11 373 1.5E-103 T 11-10-2018 TF3313_0641 104bf6899aef6d71383dc473c1adab3b 525 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 4 523 2.3E-201 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 TF3313_0641 104bf6899aef6d71383dc473c1adab3b 525 SUPERFAMILY SSF54980 389 463 6.47E-14 T 11-10-2018 IPR035647 EF-G domain III/V-like TF3313_0641 104bf6899aef6d71383dc473c1adab3b 525 SUPERFAMILY SSF52540 7 273 1.22E-85 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0641 104bf6899aef6d71383dc473c1adab3b 525 Gene3D G3DSA:3.40.50.300 18 271 1.5E-103 T 11-10-2018 TF3313_0641 104bf6899aef6d71383dc473c1adab3b 525 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 1 523 50.291 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 TF3313_0641 104bf6899aef6d71383dc473c1adab3b 525 Pfam PF16658 Class II release factor RF3, C-terminal domain 383 510 7.9E-44 T 11-10-2018 IPR032090 Peptide chain release factor 3, C-terminal TF3313_0641 104bf6899aef6d71383dc473c1adab3b 525 Pfam PF00009 Elongation factor Tu GTP binding domain 9 273 4.4E-51 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TF3313_0641 104bf6899aef6d71383dc473c1adab3b 525 SUPERFAMILY SSF50447 257 389 1.16E-24 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TF3313_0641 104bf6899aef6d71383dc473c1adab3b 525 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 157 6.3E-27 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TF3313_0641 104bf6899aef6d71383dc473c1adab3b 525 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 55 70 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site TF3313_0641 104bf6899aef6d71383dc473c1adab3b 525 Gene3D G3DSA:3.30.70.3280 386 525 2.2E-52 T 11-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily TF3313_0641 104bf6899aef6d71383dc473c1adab3b 525 PRINTS PR00315 GTP-binding elongation factor signature 12 25 2.5E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TF3313_0641 104bf6899aef6d71383dc473c1adab3b 525 PRINTS PR00315 GTP-binding elongation factor signature 62 70 2.5E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TF3313_0641 104bf6899aef6d71383dc473c1adab3b 525 PRINTS PR00315 GTP-binding elongation factor signature 82 92 2.5E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TF3313_0641 104bf6899aef6d71383dc473c1adab3b 525 PRINTS PR00315 GTP-binding elongation factor signature 98 109 2.5E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TF3313_0641 104bf6899aef6d71383dc473c1adab3b 525 PRINTS PR00315 GTP-binding elongation factor signature 134 143 2.5E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TF3313_1458 ad0fec18b38fd992a0fa783879b44290 205 Gene3D G3DSA:1.10.357.10 3 204 1.9E-20 T 11-10-2018 TF3313_1458 ad0fec18b38fd992a0fa783879b44290 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 4.9E-12 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TF3313_1458 ad0fec18b38fd992a0fa783879b44290 205 SUPERFAMILY SSF46689 4 76 4.51E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TF3313_1458 ad0fec18b38fd992a0fa783879b44290 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 3.8E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TF3313_1458 ad0fec18b38fd992a0fa783879b44290 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 3.8E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TF3313_0720 4fdb0dd0843e9c34b184578274062cd9 338 SUPERFAMILY SSF52096 28 332 9.28E-58 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TF3313_0720 4fdb0dd0843e9c34b184578274062cd9 338 Gene3D G3DSA:3.90.226.10 99 328 1.5E-117 T 11-10-2018 TF3313_0720 4fdb0dd0843e9c34b184578274062cd9 338 Gene3D G3DSA:3.30.750.44 31 289 1.5E-117 T 11-10-2018 TF3313_0720 4fdb0dd0843e9c34b184578274062cd9 338 Pfam PF14684 Tricorn protease C1 domain 29 92 5.0E-13 T 11-10-2018 IPR028204 Tricorn protease C1 domain TF3313_0720 4fdb0dd0843e9c34b184578274062cd9 338 SMART SM00245 109 310 3.5E-4 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 TF3313_0720 4fdb0dd0843e9c34b184578274062cd9 338 Pfam PF03572 Peptidase family S41 140 309 1.9E-34 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 TF3313_1483 fd841dc99347ff5ad9d06e4b96ba0447 583 Pfam PF00664 ABC transporter transmembrane region 22 287 2.4E-22 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TF3313_1483 fd841dc99347ff5ad9d06e4b96ba0447 583 SUPERFAMILY SSF52540 330 573 9.82E-84 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1483 fd841dc99347ff5ad9d06e4b96ba0447 583 Gene3D G3DSA:1.20.1560.10 1 327 2.4E-34 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TF3313_1483 fd841dc99347ff5ad9d06e4b96ba0447 583 Pfam PF00005 ABC transporter 357 505 1.1E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TF3313_1483 fd841dc99347ff5ad9d06e4b96ba0447 583 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TF3313_1483 fd841dc99347ff5ad9d06e4b96ba0447 583 Gene3D G3DSA:3.40.50.300 335 581 1.0E-81 T 11-10-2018 TF3313_1483 fd841dc99347ff5ad9d06e4b96ba0447 583 SMART SM00382 365 551 6.0E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_1483 fd841dc99347ff5ad9d06e4b96ba0447 583 SUPERFAMILY SSF90123 6 331 3.27E-45 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TF3313_1861 a1a86ea7e3b0d7e910607cd65a31c65a 226 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 33 114 3.1E-9 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain TF3313_1861 a1a86ea7e3b0d7e910607cd65a31c65a 226 Gene3D G3DSA:3.10.50.40 33 188 1.7E-50 T 11-10-2018 TF3313_1861 a1a86ea7e3b0d7e910607cd65a31c65a 226 SUPERFAMILY SSF54534 33 179 1.83E-26 T 11-10-2018 TF3313_1861 a1a86ea7e3b0d7e910607cd65a31c65a 226 Gene3D G3DSA:2.40.10.330 104 160 1.7E-50 T 11-10-2018 TF3313_1347 bcd093a2464734cbfa57e99d754c4e01 216 Gene3D G3DSA:3.40.50.1000 8 191 1.3E-42 T 11-10-2018 IPR023214 HAD superfamily TF3313_1347 bcd093a2464734cbfa57e99d754c4e01 216 SUPERFAMILY SSF56784 8 206 2.81E-40 T 11-10-2018 IPR036412 HAD-like superfamily TF3313_1347 bcd093a2464734cbfa57e99d754c4e01 216 Gene3D G3DSA:1.10.150.240 21 82 1.3E-42 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 TF3313_1347 bcd093a2464734cbfa57e99d754c4e01 216 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 67 177 1.2E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TF3313_1347 bcd093a2464734cbfa57e99d754c4e01 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 145 165 4.0E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TF3313_1347 bcd093a2464734cbfa57e99d754c4e01 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 127 143 4.0E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TF3313_1347 bcd093a2464734cbfa57e99d754c4e01 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 95 108 4.0E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TF3313_1347 bcd093a2464734cbfa57e99d754c4e01 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 4.0E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TF3313_1347 bcd093a2464734cbfa57e99d754c4e01 216 Pfam PF13419 Haloacid dehalogenase-like hydrolase 10 182 1.5E-28 T 11-10-2018 TF3313_1347 bcd093a2464734cbfa57e99d754c4e01 216 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 8 182 1.2E-19 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TF3313_2353 0fd90f03ff0d3c36176f724a5b199bf3 658 TIGRFAM TIGR00767 rho: transcription termination factor Rho 5 657 1.3E-191 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 TF3313_2353 0fd90f03ff0d3c36176f724a5b199bf3 658 Gene3D G3DSA:2.40.50.140 241 367 2.9E-38 T 11-10-2018 TF3313_2353 0fd90f03ff0d3c36176f724a5b199bf3 658 Gene3D G3DSA:1.10.720.10 1 48 1.4E-10 T 11-10-2018 TF3313_2353 0fd90f03ff0d3c36176f724a5b199bf3 658 SUPERFAMILY SSF68912 4 46 2.51E-8 T 11-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily TF3313_2353 0fd90f03ff0d3c36176f724a5b199bf3 658 SUPERFAMILY SSF52540 329 611 1.71E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2353 0fd90f03ff0d3c36176f724a5b199bf3 658 Pfam PF07498 Rho termination factor, N-terminal domain 8 46 6.9E-11 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 TF3313_2353 0fd90f03ff0d3c36176f724a5b199bf3 658 SMART SM00382 410 627 1.4E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_2353 0fd90f03ff0d3c36176f724a5b199bf3 658 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 399 603 9.6E-24 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TF3313_2353 0fd90f03ff0d3c36176f724a5b199bf3 658 SMART SM00959 8 50 4.9E-7 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 TF3313_2353 0fd90f03ff0d3c36176f724a5b199bf3 658 SUPERFAMILY SSF50249 288 363 3.26E-26 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TF3313_2353 0fd90f03ff0d3c36176f724a5b199bf3 658 Hamap MF_01884 Transcription termination factor Rho [rho]. 287 658 200.8 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 TF3313_2353 0fd90f03ff0d3c36176f724a5b199bf3 658 Gene3D G3DSA:3.40.50.300 368 657 5.8E-123 T 11-10-2018 TF3313_2353 0fd90f03ff0d3c36176f724a5b199bf3 658 SMART SM00357 290 356 1.5E-17 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 TF3313_2353 0fd90f03ff0d3c36176f724a5b199bf3 658 Pfam PF07497 Rho termination factor, RNA-binding domain 290 363 2.1E-31 T 11-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 TF3313_0754 4693ab4516d9ff68333e60d7b7bd43ef 382 Pfam PF07396 Phosphate-selective porin O and P 32 382 1.9E-20 T 11-10-2018 IPR010870 Phosphate-selective porin O/P TF3313_0754 4693ab4516d9ff68333e60d7b7bd43ef 382 Gene3D G3DSA:2.40.160.10 15 382 1.3E-43 T 11-10-2018 IPR023614 Porin domain superfamily TF3313_2176 7593b3b9ba23ea30fc5640b77cdab66c 740 Gene3D G3DSA:1.10.10.160 86 171 8.8E-89 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily TF3313_2176 7593b3b9ba23ea30fc5640b77cdab66c 740 Gene3D G3DSA:1.10.486.10 365 533 6.1E-119 T 11-10-2018 TF3313_2176 7593b3b9ba23ea30fc5640b77cdab66c 740 Pfam PF00580 UvrD/REP helicase N-terminal domain 1 253 2.7E-64 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 TF3313_2176 7593b3b9ba23ea30fc5640b77cdab66c 740 Pfam PF13361 UvrD-like helicase C-terminal domain 260 603 5.7E-73 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 TF3313_2176 7593b3b9ba23ea30fc5640b77cdab66c 740 Gene3D G3DSA:3.40.50.300 262 620 6.1E-119 T 11-10-2018 TF3313_2176 7593b3b9ba23ea30fc5640b77cdab66c 740 Gene3D G3DSA:3.40.50.300 1 255 8.8E-89 T 11-10-2018 TF3313_2176 7593b3b9ba23ea30fc5640b77cdab66c 740 SUPERFAMILY SSF52540 2 628 1.61E-161 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1677 793f31317366cf9a07d76aa02e7836e6 477 SUPERFAMILY SSF56024 266 463 2.92E-45 T 11-10-2018 TF3313_1677 793f31317366cf9a07d76aa02e7836e6 477 Pfam PF13091 PLD-like domain 133 262 1.3E-15 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 TF3313_1677 793f31317366cf9a07d76aa02e7836e6 477 Pfam PF13091 PLD-like domain 320 442 3.9E-26 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 TF3313_1677 793f31317366cf9a07d76aa02e7836e6 477 Gene3D G3DSA:3.30.870.10 295 474 1.4E-29 T 11-10-2018 TF3313_1677 793f31317366cf9a07d76aa02e7836e6 477 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 9 477 2.1E-145 T 11-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 TF3313_1677 793f31317366cf9a07d76aa02e7836e6 477 SMART SM00155 390 417 6.1E-8 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 TF3313_1677 793f31317366cf9a07d76aa02e7836e6 477 SMART SM00155 215 242 7.2E-7 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 TF3313_1677 793f31317366cf9a07d76aa02e7836e6 477 Pfam PF13396 Phospholipase_D-nuclease N-terminal 20 62 1.0E-9 T 11-10-2018 IPR027379 Cardiolipin synthase N-terminal TF3313_1677 793f31317366cf9a07d76aa02e7836e6 477 SUPERFAMILY SSF56024 103 306 2.76E-54 T 11-10-2018 TF3313_1677 793f31317366cf9a07d76aa02e7836e6 477 Hamap MF_01916 Cardiolipin synthase. 14 477 40.847 T 11-10-2018 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 TF3313_1677 793f31317366cf9a07d76aa02e7836e6 477 Gene3D G3DSA:3.30.870.10 114 289 2.0E-45 T 11-10-2018 TF3313_1369 1c5fb552874349c7d04d3aba678f2a80 786 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 73 521 1.7E-147 T 11-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 TF3313_1369 1c5fb552874349c7d04d3aba678f2a80 786 Gene3D G3DSA:1.10.150.80 587 667 2.8E-22 T 11-10-2018 TF3313_1369 1c5fb552874349c7d04d3aba678f2a80 786 SUPERFAMILY SSF47819 588 671 2.18E-23 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 TF3313_1369 1c5fb552874349c7d04d3aba678f2a80 786 Gene3D G3DSA:3.40.50.300 37 265 7.4E-72 T 11-10-2018 TF3313_1369 1c5fb552874349c7d04d3aba678f2a80 786 Gene3D G3DSA:3.40.50.300 266 397 1.9E-42 T 11-10-2018 TF3313_1369 1c5fb552874349c7d04d3aba678f2a80 786 Pfam PF16124 RecQ zinc-binding 400 461 8.0E-14 T 11-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain TF3313_1369 1c5fb552874349c7d04d3aba678f2a80 786 Gene3D G3DSA:1.10.10.1390 668 786 3.9E-56 T 11-10-2018 TF3313_1369 1c5fb552874349c7d04d3aba678f2a80 786 Gene3D G3DSA:1.10.10.10 399 576 1.4E-38 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_1369 1c5fb552874349c7d04d3aba678f2a80 786 SMART SM00341 589 669 3.6E-10 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 TF3313_1369 1c5fb552874349c7d04d3aba678f2a80 786 SMART SM00487 75 274 6.7E-32 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TF3313_1369 1c5fb552874349c7d04d3aba678f2a80 786 Pfam PF00270 DEAD/DEAH box helicase 83 244 1.6E-19 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TF3313_1369 1c5fb552874349c7d04d3aba678f2a80 786 SMART SM00956 468 571 5.3E-23 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 TF3313_1369 1c5fb552874349c7d04d3aba678f2a80 786 SUPERFAMILY SSF46785 459 575 1.21E-29 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TF3313_1369 1c5fb552874349c7d04d3aba678f2a80 786 SUPERFAMILY SSF52540 119 408 4.24E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1369 1c5fb552874349c7d04d3aba678f2a80 786 Pfam PF09382 RQC domain 467 572 7.7E-23 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 TF3313_1369 1c5fb552874349c7d04d3aba678f2a80 786 Pfam PF00570 HRDC domain 594 659 1.2E-17 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 TF3313_1369 1c5fb552874349c7d04d3aba678f2a80 786 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 70 662 1.9E-200 T 11-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 TF3313_1369 1c5fb552874349c7d04d3aba678f2a80 786 Pfam PF00271 Helicase conserved C-terminal domain 284 387 3.4E-19 T 11-10-2018 IPR001650 Helicase, C-terminal TF3313_1369 1c5fb552874349c7d04d3aba678f2a80 786 SMART SM00490 307 388 4.0E-28 T 11-10-2018 IPR001650 Helicase, C-terminal TF3313_0759 d41c15d35ba2e5b56d6b94b0fbd58a82 376 SUPERFAMILY SSF74650 34 372 8.79E-114 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 TF3313_0759 d41c15d35ba2e5b56d6b94b0fbd58a82 376 Gene3D G3DSA:2.70.98.10 35 374 8.1E-123 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 TF3313_0759 d41c15d35ba2e5b56d6b94b0fbd58a82 376 PIRSF PIRSF005096 27 375 1.9E-132 T 11-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 TF3313_0759 d41c15d35ba2e5b56d6b94b0fbd58a82 376 Pfam PF01263 Aldose 1-epimerase 46 371 2.3E-85 T 11-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 TF3313_0759 d41c15d35ba2e5b56d6b94b0fbd58a82 376 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 200 209 - T 11-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 TF3313_1036 aa3330334c7484c91afdeb7e5fd5ba0a 824 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 475 485 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site TF3313_1036 aa3330334c7484c91afdeb7e5fd5ba0a 824 SUPERFAMILY SSF52743 223 546 2.62E-68 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 TF3313_1036 aa3330334c7484c91afdeb7e5fd5ba0a 824 Gene3D G3DSA:3.40.50.200 200 549 5.4E-83 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 TF3313_1036 aa3330334c7484c91afdeb7e5fd5ba0a 824 PRINTS PR00723 Subtilisin serine protease family (S8) signature 278 291 2.0E-17 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related TF3313_1036 aa3330334c7484c91afdeb7e5fd5ba0a 824 PRINTS PR00723 Subtilisin serine protease family (S8) signature 239 258 2.0E-17 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related TF3313_1036 aa3330334c7484c91afdeb7e5fd5ba0a 824 PRINTS PR00723 Subtilisin serine protease family (S8) signature 474 490 2.0E-17 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related TF3313_1036 aa3330334c7484c91afdeb7e5fd5ba0a 824 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 777 824 5.6E-7 T 11-10-2018 IPR026444 Secretion system C-terminal sorting domain TF3313_1036 aa3330334c7484c91afdeb7e5fd5ba0a 824 Pfam PF00082 Subtilase family 239 536 5.7E-40 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 TF3313_1224 8fd2e1c0498a6d84f04e227db9a5ed04 1035 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 32 222 1.7E-49 T 11-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 TF3313_1224 8fd2e1c0498a6d84f04e227db9a5ed04 1035 Gene3D G3DSA:3.90.640.50 59 131 8.7E-92 T 11-10-2018 TF3313_1224 8fd2e1c0498a6d84f04e227db9a5ed04 1035 SUPERFAMILY SSF52540 307 704 1.42E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1224 8fd2e1c0498a6d84f04e227db9a5ed04 1035 Gene3D G3DSA:1.20.58.2040 729 882 3.6E-79 T 11-10-2018 TF3313_1224 8fd2e1c0498a6d84f04e227db9a5ed04 1035 Gene3D G3DSA:3.40.50.300 274 464 3.0E-74 T 11-10-2018 TF3313_1224 8fd2e1c0498a6d84f04e227db9a5ed04 1035 SMART SM00487 271 481 2.8E-14 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TF3313_1224 8fd2e1c0498a6d84f04e227db9a5ed04 1035 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 36 722 1.1E-205 T 11-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 TF3313_1224 8fd2e1c0498a6d84f04e227db9a5ed04 1035 Gene3D G3DSA:1.10.10.2110 792 833 3.6E-79 T 11-10-2018 TF3313_1224 8fd2e1c0498a6d84f04e227db9a5ed04 1035 SUPERFAMILY SSF52540 232 443 1.28E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1224 8fd2e1c0498a6d84f04e227db9a5ed04 1035 Pfam PF04851 Type III restriction enzyme, res subunit 275 442 3.7E-37 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 TF3313_1224 8fd2e1c0498a6d84f04e227db9a5ed04 1035 ProDom PD047574 TYPE I RESTRICTION HYDROLASE DEOXYRIBONUCLEASE SITE-SPECIFIC HSDR ENZYME SYSTEM ENDONUCLEASE 837 869 2.0E-5 T 11-10-2018 TF3313_1224 8fd2e1c0498a6d84f04e227db9a5ed04 1035 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 725 1028 7.0E-67 T 11-10-2018 IPR022625 Type-1 restriction enzyme R protein, C-terminal TF3313_1224 8fd2e1c0498a6d84f04e227db9a5ed04 1035 Gene3D G3DSA:3.40.50.300 465 728 1.3E-101 T 11-10-2018 TF3313_1224 8fd2e1c0498a6d84f04e227db9a5ed04 1035 Gene3D G3DSA:3.90.1570.50 32 267 8.7E-92 T 11-10-2018 TF3313_0918 8f172387258896d075775bbb40fc9ce4 1164 Pfam PF07715 TonB-dependent Receptor Plug Domain 213 320 6.4E-20 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_0918 8f172387258896d075775bbb40fc9ce4 1164 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 296 326 1.1E-15 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_0918 8f172387258896d075775bbb40fc9ce4 1164 SUPERFAMILY SSF49464 122 203 1.44E-17 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_0918 8f172387258896d075775bbb40fc9ce4 1164 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 124 1162 8.4E-267 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_0918 8f172387258896d075775bbb40fc9ce4 1164 SUPERFAMILY SSF56935 201 1128 1.05E-78 T 11-10-2018 TF3313_0918 8f172387258896d075775bbb40fc9ce4 1164 Pfam PF07660 Secretin and TonB N terminus short domain 54 106 5.2E-7 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TF3313_0918 8f172387258896d075775bbb40fc9ce4 1164 Pfam PF00593 TonB dependent receptor 518 1159 1.4E-36 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_0918 8f172387258896d075775bbb40fc9ce4 1164 Pfam PF13715 CarboxypepD_reg-like domain 124 205 8.2E-17 T 11-10-2018 TF3313_0918 8f172387258896d075775bbb40fc9ce4 1164 SMART SM00965 54 106 7.6E-6 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TF3313_0918 8f172387258896d075775bbb40fc9ce4 1164 Gene3D G3DSA:2.60.40.1120 123 193 2.2E-5 T 11-10-2018 TF3313_0918 8f172387258896d075775bbb40fc9ce4 1164 Gene3D G3DSA:2.170.130.10 194 325 1.2E-29 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_2762 4573b83d70466c7eca20e04d2d652203 207 SUPERFAMILY SSF103256 9 138 2.09E-35 T 11-10-2018 IPR036104 Bifunctional nuclease superfamily GO:0004518 TF3313_2762 4573b83d70466c7eca20e04d2d652203 207 Pfam PF02577 Bifunctional nuclease 9 134 9.9E-39 T 11-10-2018 IPR003729 Bifunctional nuclease domain GO:0004518 TF3313_2762 4573b83d70466c7eca20e04d2d652203 207 Gene3D G3DSA:3.10.690.10 1 143 3.4E-39 T 11-10-2018 IPR036104 Bifunctional nuclease superfamily GO:0004518 TF3313_2762 4573b83d70466c7eca20e04d2d652203 207 Pfam PF02151 UvrB/uvrC motif 173 199 2.8E-5 T 11-10-2018 IPR001943 UVR domain GO:0005515 TF3313_1743 4a87b856e7bf0410be72f518a949ba4b 111 Pfam PF01253 Translation initiation factor SUI1 37 108 1.1E-19 T 11-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 TF3313_1743 4a87b856e7bf0410be72f518a949ba4b 111 Gene3D G3DSA:3.30.780.10 37 110 8.0E-24 T 11-10-2018 TF3313_1743 4a87b856e7bf0410be72f518a949ba4b 111 SUPERFAMILY SSF55159 10 109 2.35E-24 T 11-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 TF3313_1743 4a87b856e7bf0410be72f518a949ba4b 111 PIRSF PIRSF037511 1 110 3.5E-31 T 11-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 TF3313_1826 9a978343d422679ae131f13998bce280 831 Pfam PF00128 Alpha amylase, catalytic domain 315 613 5.9E-24 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TF3313_1826 9a978343d422679ae131f13998bce280 831 SUPERFAMILY SSF81296 171 250 5.8E-11 T 11-10-2018 IPR014756 Immunoglobulin E-set TF3313_1826 9a978343d422679ae131f13998bce280 831 Gene3D G3DSA:2.60.40.10 163 252 1.7E-9 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_1826 9a978343d422679ae131f13998bce280 831 Gene3D G3DSA:3.20.20.80 279 659 6.5E-79 T 11-10-2018 TF3313_1826 9a978343d422679ae131f13998bce280 831 SUPERFAMILY SSF51445 278 659 1.25E-86 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily TF3313_1826 9a978343d422679ae131f13998bce280 831 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 164 246 7.9E-7 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 TF3313_1826 9a978343d422679ae131f13998bce280 831 SMART SM00642 299 652 1.2E-18 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TF3313_1770 c16423cad18bbe671d29aebec1f85a22 242 Pfam PF11967 Recombination protein O N terminal 1 77 2.9E-17 T 11-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal TF3313_1770 c16423cad18bbe671d29aebec1f85a22 242 Pfam PF02565 Recombination protein O C terminal 86 228 3.4E-16 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 TF3313_1770 c16423cad18bbe671d29aebec1f85a22 242 Hamap MF_00201 DNA repair protein RecO [recO]. 1 239 15.258 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 TF3313_1770 c16423cad18bbe671d29aebec1f85a22 242 SUPERFAMILY SSF50249 1 76 6.0E-8 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TF3313_1770 c16423cad18bbe671d29aebec1f85a22 242 Gene3D G3DSA:2.40.50.140 2 77 5.3E-8 T 11-10-2018 TF3313_1770 c16423cad18bbe671d29aebec1f85a22 242 SUPERFAMILY SSF57863 86 224 2.62E-8 T 11-10-2018 IPR037278 ARFGAP/RecO-like zinc finger TF3313_1770 c16423cad18bbe671d29aebec1f85a22 242 TIGRFAM TIGR00613 reco: DNA repair protein RecO 4 158 1.6E-15 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 TF3313_2684 1dce2494acfe8bd2c03e92df1142bac9 442 Gene3D G3DSA:1.10.260.30 305 427 1.3E-41 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 TF3313_2684 1dce2494acfe8bd2c03e92df1142bac9 442 SMART SM00963 1 86 3.7E-31 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TF3313_2684 1dce2494acfe8bd2c03e92df1142bac9 442 Gene3D G3DSA:3.40.50.300 90 284 6.6E-126 T 11-10-2018 TF3313_2684 1dce2494acfe8bd2c03e92df1142bac9 442 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 4.9E-20 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TF3313_2684 1dce2494acfe8bd2c03e92df1142bac9 442 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 436 33.359 T 11-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 TF3313_2684 1dce2494acfe8bd2c03e92df1142bac9 442 SMART SM00382 98 300 8.7E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_2684 1dce2494acfe8bd2c03e92df1142bac9 442 SUPERFAMILY SSF52540 42 353 7.43E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2684 1dce2494acfe8bd2c03e92df1142bac9 442 Gene3D G3DSA:1.20.120.140 4 304 6.6E-126 T 11-10-2018 TF3313_2684 1dce2494acfe8bd2c03e92df1142bac9 442 Pfam PF00448 SRP54-type protein, GTPase domain 99 295 1.2E-75 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TF3313_2684 1dce2494acfe8bd2c03e92df1142bac9 442 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 268 281 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TF3313_2684 1dce2494acfe8bd2c03e92df1142bac9 442 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 424 2.4E-192 T 11-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 TF3313_2684 1dce2494acfe8bd2c03e92df1142bac9 442 SUPERFAMILY SSF47446 326 426 3.27E-36 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 TF3313_2684 1dce2494acfe8bd2c03e92df1142bac9 442 SMART SM00962 99 295 9.0E-115 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TF3313_2684 1dce2494acfe8bd2c03e92df1142bac9 442 Pfam PF02978 Signal peptide binding domain 326 423 8.2E-35 T 11-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 TF3313_1525 7072108adbdb8d60f12210f6dd60f503 452 SUPERFAMILY SSF69705 1 123 5.1E-30 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 TF3313_1525 7072108adbdb8d60f12210f6dd60f503 452 SUPERFAMILY SSF54814 200 275 1.24E-28 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 TF3313_1525 7072108adbdb8d60f12210f6dd60f503 452 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 2 339 6.7E-119 T 11-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 TF3313_1525 7072108adbdb8d60f12210f6dd60f503 452 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 5 425 25.746 T 11-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 TF3313_1525 7072108adbdb8d60f12210f6dd60f503 452 Gene3D G3DSA:3.30.300.20 197 275 1.0E-31 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta TF3313_1525 7072108adbdb8d60f12210f6dd60f503 452 Gene3D G3DSA:2.40.50.140 133 196 3.6E-12 T 11-10-2018 TF3313_1525 7072108adbdb8d60f12210f6dd60f503 452 Pfam PF08529 NusA N-terminal domain 2 122 5.8E-29 T 11-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 TF3313_1525 7072108adbdb8d60f12210f6dd60f503 452 Pfam PF13184 NusA-like KH domain 228 295 6.1E-27 T 11-10-2018 IPR025249 KH domain, NusA-like GO:0003723 TF3313_1525 7072108adbdb8d60f12210f6dd60f503 452 SUPERFAMILY SSF50249 130 197 3.32E-11 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TF3313_1525 7072108adbdb8d60f12210f6dd60f503 452 Gene3D G3DSA:3.30.300.20 276 427 1.0E-28 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta TF3313_1525 7072108adbdb8d60f12210f6dd60f503 452 SUPERFAMILY SSF54814 279 339 1.26E-11 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 TF3313_1525 7072108adbdb8d60f12210f6dd60f503 452 Gene3D G3DSA:3.30.1480.10 1 123 4.1E-28 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 TF3313_0726 3ef93dd32d9bd355dd363002d43e2a44 751 SUPERFAMILY SSF81271 395 467 4.8E-23 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 TF3313_0726 3ef93dd32d9bd355dd363002d43e2a44 751 Gene3D G3DSA:3.30.70.260 671 751 3.6E-16 T 11-10-2018 TF3313_0726 3ef93dd32d9bd355dd363002d43e2a44 751 Pfam PF02824 TGS domain 408 467 1.8E-21 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 TF3313_0726 3ef93dd32d9bd355dd363002d43e2a44 751 Gene3D G3DSA:3.10.20.30 401 475 2.0E-32 T 11-10-2018 IPR012675 Beta-grasp domain superfamily TF3313_0726 3ef93dd32d9bd355dd363002d43e2a44 751 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 41 747 1.1E-195 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 TF3313_0726 3ef93dd32d9bd355dd363002d43e2a44 751 Pfam PF13291 ACT domain 671 748 5.9E-17 T 11-10-2018 IPR002912 ACT domain TF3313_0726 3ef93dd32d9bd355dd363002d43e2a44 751 SUPERFAMILY SSF109604 22 207 2.73E-63 T 11-10-2018 TF3313_0726 3ef93dd32d9bd355dd363002d43e2a44 751 Pfam PF04607 Region found in RelA / SpoT proteins 251 366 7.4E-31 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 TF3313_0726 3ef93dd32d9bd355dd363002d43e2a44 751 Gene3D G3DSA:1.10.3210.10 10 206 1.3E-70 T 11-10-2018 TF3313_0726 3ef93dd32d9bd355dd363002d43e2a44 751 SUPERFAMILY SSF81301 197 412 3.92E-52 T 11-10-2018 TF3313_0726 3ef93dd32d9bd355dd363002d43e2a44 751 SMART SM00471 56 169 4.0E-6 T 11-10-2018 IPR003607 HD/PDEase domain TF3313_0726 3ef93dd32d9bd355dd363002d43e2a44 751 SMART SM00954 251 367 5.5E-48 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 TF3313_0726 3ef93dd32d9bd355dd363002d43e2a44 751 Gene3D G3DSA:3.30.460.10 208 347 7.2E-40 T 11-10-2018 TF3313_0726 3ef93dd32d9bd355dd363002d43e2a44 751 Pfam PF13328 HD domain 41 191 4.0E-45 T 11-10-2018 IPR003607 HD/PDEase domain TF3313_1681 e262f24570d5d7eca0de4ec8fd84f86d 474 SUPERFAMILY SSF52540 15 466 1.19E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1681 e262f24570d5d7eca0de4ec8fd84f86d 474 Pfam PF13604 AAA domain 21 221 4.4E-27 T 11-10-2018 TF3313_1681 e262f24570d5d7eca0de4ec8fd84f86d 474 Gene3D G3DSA:3.40.50.300 7 223 2.3E-39 T 11-10-2018 TF3313_1681 e262f24570d5d7eca0de4ec8fd84f86d 474 Pfam PF13538 UvrD-like helicase C-terminal domain 412 463 4.9E-20 T 11-10-2018 IPR027785 UvrD-like helicase C-terminal domain TF3313_1681 e262f24570d5d7eca0de4ec8fd84f86d 474 Gene3D G3DSA:3.40.50.300 389 472 1.4E-15 T 11-10-2018 TF3313_1963 acde9ffb201e78a3e3cb5de68cf9cbe7 243 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 20 242 26.263 T 11-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 TF3313_1963 acde9ffb201e78a3e3cb5de68cf9cbe7 243 Pfam PF04205 FMN-binding domain 136 229 1.7E-14 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 TF3313_1963 acde9ffb201e78a3e3cb5de68cf9cbe7 243 SMART SM00900 136 234 2.7E-20 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 TF3313_1963 acde9ffb201e78a3e3cb5de68cf9cbe7 243 PIRSF PIRSF009437 7 113 4.0E-11 T 11-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 TF3313_1963 acde9ffb201e78a3e3cb5de68cf9cbe7 243 PIRSF PIRSF009437 92 243 1.8E-39 T 11-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 TF3313_1963 acde9ffb201e78a3e3cb5de68cf9cbe7 243 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 118 239 1.3E-46 T 11-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 TF3313_2226 65828fb24cc47c20b057633861f5552d 262 Gene3D G3DSA:1.10.150.240 38 108 6.0E-70 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 TF3313_2226 65828fb24cc47c20b057633861f5552d 262 Gene3D G3DSA:3.40.50.1000 22 228 6.0E-70 T 11-10-2018 IPR023214 HAD superfamily TF3313_2226 65828fb24cc47c20b057633861f5552d 262 Pfam PF13419 Haloacid dehalogenase-like hydrolase 25 206 1.8E-20 T 11-10-2018 TF3313_2226 65828fb24cc47c20b057633861f5552d 262 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 154 206 1.6E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TF3313_2226 65828fb24cc47c20b057633861f5552d 262 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 168 188 2.7E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TF3313_2226 65828fb24cc47c20b057633861f5552d 262 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 166 2.7E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TF3313_2226 65828fb24cc47c20b057633861f5552d 262 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 195 208 2.7E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TF3313_2226 65828fb24cc47c20b057633861f5552d 262 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 22 33 2.7E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TF3313_2226 65828fb24cc47c20b057633861f5552d 262 SUPERFAMILY SSF56784 22 237 9.9E-43 T 11-10-2018 IPR036412 HAD-like superfamily TF3313_1043 6f532c1a9e6e2719d59b395ab9026d7a 583 PIRSF PIRSF037336 293 560 8.4E-76 T 11-10-2018 IPR017178 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 TF3313_1043 6f532c1a9e6e2719d59b395ab9026d7a 583 PIRSF PIRSF037336 1 289 6.2E-127 T 11-10-2018 IPR017178 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 TF3313_1043 6f532c1a9e6e2719d59b395ab9026d7a 583 SUPERFAMILY SSF51717 6 205 8.63E-5 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TF3313_1043 6f532c1a9e6e2719d59b395ab9026d7a 583 Gene3D G3DSA:3.30.413.10 462 561 3.3E-29 T 11-10-2018 TF3313_1043 6f532c1a9e6e2719d59b395ab9026d7a 583 Gene3D G3DSA:3.20.20.20 1 259 6.4E-93 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TF3313_1043 6f532c1a9e6e2719d59b395ab9026d7a 583 SUPERFAMILY SSF56014 464 552 2.91E-13 T 11-10-2018 TF3313_1043 6f532c1a9e6e2719d59b395ab9026d7a 583 Pfam PF04551 GcpE protein 412 553 3.5E-43 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 TF3313_1043 6f532c1a9e6e2719d59b395ab9026d7a 583 Pfam PF04551 GcpE protein 1 259 1.0E-94 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 TF3313_1043 6f532c1a9e6e2719d59b395ab9026d7a 583 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 1 557 34.157 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 TF3313_0652 a960f5f18ca7692cca52e408dfef9fc0 184 Pfam PF12728 Helix-turn-helix domain 64 111 1.7E-9 T 11-10-2018 TF3313_0652 a960f5f18ca7692cca52e408dfef9fc0 184 Gene3D G3DSA:1.10.1660.10 62 117 7.7E-7 T 11-10-2018 TF3313_1748 adee693b98a75c4113e9eeccdc793a5e 411 Gene3D G3DSA:3.40.50.300 202 392 3.3E-41 T 11-10-2018 TF3313_1748 adee693b98a75c4113e9eeccdc793a5e 411 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 13 380 8.6E-131 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 TF3313_1748 adee693b98a75c4113e9eeccdc793a5e 411 SUPERFAMILY SSF52540 201 384 1.28E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1748 adee693b98a75c4113e9eeccdc793a5e 411 Gene3D G3DSA:3.40.50.11060 24 144 6.8E-39 T 11-10-2018 TF3313_1748 adee693b98a75c4113e9eeccdc793a5e 411 Pfam PF13167 GTP-binding GTPase N-terminal 31 118 2.0E-31 T 11-10-2018 IPR025121 GTPase HflX, N-terminal TF3313_1748 adee693b98a75c4113e9eeccdc793a5e 411 Pfam PF01926 50S ribosome-binding GTPase 203 321 1.1E-21 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TF3313_1748 adee693b98a75c4113e9eeccdc793a5e 411 PIRSF PIRSF006809 6 410 8.0E-136 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 TF3313_1748 adee693b98a75c4113e9eeccdc793a5e 411 Pfam PF16360 GTP-binding GTPase Middle Region 120 198 1.3E-31 T 11-10-2018 IPR032305 GTP-binding protein, middle domain TF3313_1748 adee693b98a75c4113e9eeccdc793a5e 411 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 270 288 1.3E-8 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TF3313_1748 adee693b98a75c4113e9eeccdc793a5e 411 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 204 224 1.3E-8 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TF3313_1748 adee693b98a75c4113e9eeccdc793a5e 411 Hamap MF_00900 GTPase HflX [hflX]. 33 403 45.51 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 TF3313_1193 55d023a6c00e88a1fb3f9b3dde2dd41c 283 Gene3D G3DSA:2.10.109.10 25 89 6.5E-11 T 11-10-2018 TF3313_1193 55d023a6c00e88a1fb3f9b3dde2dd41c 283 Pfam PF00717 Peptidase S24-like 32 96 2.1E-7 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C TF3313_1193 55d023a6c00e88a1fb3f9b3dde2dd41c 283 SUPERFAMILY SSF51306 211 279 1.73E-13 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily TF3313_1193 55d023a6c00e88a1fb3f9b3dde2dd41c 283 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 25 41 5.4E-9 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TF3313_1193 55d023a6c00e88a1fb3f9b3dde2dd41c 283 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 79 91 5.4E-9 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TF3313_1193 55d023a6c00e88a1fb3f9b3dde2dd41c 283 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 233 252 5.4E-9 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TF3313_1193 55d023a6c00e88a1fb3f9b3dde2dd41c 283 Gene3D G3DSA:2.10.109.10 222 278 2.2E-8 T 11-10-2018 TF3313_1193 55d023a6c00e88a1fb3f9b3dde2dd41c 283 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 10 106 1.5E-16 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TF3313_1193 55d023a6c00e88a1fb3f9b3dde2dd41c 283 SUPERFAMILY SSF51306 24 135 1.57E-17 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily TF3313_1370 06d8f38ed125f00ff73c40a38a3c06ba 409 Pfam PF07724 AAA domain (Cdc48 subfamily) 106 302 1.4E-45 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TF3313_1370 06d8f38ed125f00ff73c40a38a3c06ba 409 Gene3D G3DSA:1.10.8.60 308 408 2.1E-28 T 11-10-2018 TF3313_1370 06d8f38ed125f00ff73c40a38a3c06ba 409 SMART SM01086 309 398 1.3E-27 T 11-10-2018 IPR019489 Clp ATPase, C-terminal TF3313_1370 06d8f38ed125f00ff73c40a38a3c06ba 409 SMART SM00994 6 45 1.3E-11 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 TF3313_1370 06d8f38ed125f00ff73c40a38a3c06ba 409 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 309 384 7.2E-14 T 11-10-2018 IPR019489 Clp ATPase, C-terminal TF3313_1370 06d8f38ed125f00ff73c40a38a3c06ba 409 SMART SM00382 106 276 5.1E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_1370 06d8f38ed125f00ff73c40a38a3c06ba 409 Gene3D G3DSA:3.40.50.300 53 307 4.6E-100 T 11-10-2018 TF3313_1370 06d8f38ed125f00ff73c40a38a3c06ba 409 Pfam PF06689 ClpX C4-type zinc finger 8 44 2.3E-13 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 TF3313_1370 06d8f38ed125f00ff73c40a38a3c06ba 409 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 406 45.474 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 TF3313_1370 06d8f38ed125f00ff73c40a38a3c06ba 409 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 8 393 2.8E-166 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 TF3313_1370 06d8f38ed125f00ff73c40a38a3c06ba 409 SUPERFAMILY SSF57716 8 42 2.99E-7 T 11-10-2018 TF3313_1370 06d8f38ed125f00ff73c40a38a3c06ba 409 Gene3D G3DSA:3.30.50.30 3 45 2.3E-10 T 11-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily TF3313_1370 06d8f38ed125f00ff73c40a38a3c06ba 409 SUPERFAMILY SSF52540 57 399 1.71E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2221 f4b08b24d7e68d6b2f2b698dd1ef2f60 247 Pfam PF00027 Cyclic nucleotide-binding domain 51 137 7.1E-15 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain TF3313_2221 f4b08b24d7e68d6b2f2b698dd1ef2f60 247 SUPERFAMILY SSF46785 168 244 1.33E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TF3313_2221 f4b08b24d7e68d6b2f2b698dd1ef2f60 247 SMART SM00100 32 150 0.0011 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain TF3313_2221 f4b08b24d7e68d6b2f2b698dd1ef2f60 247 Pfam PF13545 Crp-like helix-turn-helix domain 170 243 2.8E-12 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TF3313_2221 f4b08b24d7e68d6b2f2b698dd1ef2f60 247 SUPERFAMILY SSF51206 34 165 4.32E-29 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like TF3313_2221 f4b08b24d7e68d6b2f2b698dd1ef2f60 247 Gene3D G3DSA:2.60.120.10 18 166 8.3E-26 T 11-10-2018 IPR014710 RmlC-like jelly roll fold TF3313_2221 f4b08b24d7e68d6b2f2b698dd1ef2f60 247 Gene3D G3DSA:1.10.10.10 167 247 8.3E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_2221 f4b08b24d7e68d6b2f2b698dd1ef2f60 247 SMART SM00419 188 236 1.4E-6 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TF3313_0160 18aa692d1a466b4494cc688af9258d16 124 SUPERFAMILY SSF158446 5 112 2.62E-33 T 11-10-2018 IPR036583 23S rRNA-intervening sequence superfamily TF3313_0160 18aa692d1a466b4494cc688af9258d16 124 Pfam PF05635 23S rRNA-intervening sequence protein 9 109 5.8E-28 T 11-10-2018 IPR012657 23S rRNA-intervening sequence protein TF3313_0160 18aa692d1a466b4494cc688af9258d16 124 Gene3D G3DSA:1.20.1440.60 1 117 6.8E-42 T 11-10-2018 IPR036583 23S rRNA-intervening sequence superfamily TF3313_0160 18aa692d1a466b4494cc688af9258d16 124 PIRSF PIRSF035652 1 120 2.2E-45 T 11-10-2018 IPR012657 23S rRNA-intervening sequence protein TF3313_0160 18aa692d1a466b4494cc688af9258d16 124 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 9 114 5.6E-32 T 11-10-2018 IPR012657 23S rRNA-intervening sequence protein TF3313_2761 dac38d5ddbf94691b984b0777d9dcd0d 166 Pfam PF13905 Thioredoxin-like 54 147 4.3E-10 T 11-10-2018 IPR012336 Thioredoxin-like fold TF3313_2761 dac38d5ddbf94691b984b0777d9dcd0d 166 Gene3D G3DSA:3.40.30.10 30 163 5.3E-24 T 11-10-2018 TF3313_2761 dac38d5ddbf94691b984b0777d9dcd0d 166 SUPERFAMILY SSF52833 27 163 2.75E-12 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TF3313_1753 ad3dda2c823a8233c78da0172d9918e1 359 SMART SM00635 62 139 4.9E-14 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_1753 ad3dda2c823a8233c78da0172d9918e1 359 Pfam PF02368 Bacterial Ig-like domain (group 2) 62 132 5.5E-13 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_1753 ad3dda2c823a8233c78da0172d9918e1 359 Gene3D G3DSA:2.60.40.1080 58 142 3.3E-24 T 11-10-2018 TF3313_1753 ad3dda2c823a8233c78da0172d9918e1 359 SUPERFAMILY SSF49373 61 140 9.94E-17 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments TF3313_1073 946f145151ac95b81789e2f21a50c14e 98 Gene3D G3DSA:3.40.1780.10 10 26 9.3E-9 T 11-10-2018 TF3313_1073 946f145151ac95b81789e2f21a50c14e 98 SUPERFAMILY SSF111337 9 88 2.62E-11 T 11-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 TF3313_1073 946f145151ac95b81789e2f21a50c14e 98 Gene3D G3DSA:2.40.10.240 27 87 9.3E-9 T 11-10-2018 TF3313_1073 946f145151ac95b81789e2f21a50c14e 98 Pfam PF02547 Queuosine biosynthesis protein 10 83 4.1E-9 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 TF3313_0642 da19a07d246a1d65936cc5a4b20c9948 287 Pfam PF04321 RmlD substrate binding domain 3 283 2.3E-105 T 11-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 TF3313_0642 da19a07d246a1d65936cc5a4b20c9948 287 Gene3D G3DSA:3.40.50.720 4 270 7.2E-109 T 11-10-2018 TF3313_0642 da19a07d246a1d65936cc5a4b20c9948 287 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 4 281 2.2E-100 T 11-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 TF3313_0642 da19a07d246a1d65936cc5a4b20c9948 287 SUPERFAMILY SSF51735 1 283 7.75E-103 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_0642 da19a07d246a1d65936cc5a4b20c9948 287 Gene3D G3DSA:3.90.25.10 161 276 7.2E-109 T 11-10-2018 TF3313_2342 df139fde098916396546a1c75d42701e 1209 Gene3D G3DSA:3.20.20.80 711 1013 8.4E-62 T 11-10-2018 TF3313_2342 df139fde098916396546a1c75d42701e 1209 Gene3D G3DSA:2.60.120.260 387 590 5.2E-45 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_2342 df139fde098916396546a1c75d42701e 1209 Gene3D G3DSA:2.60.40.10 1120 1209 1.3E-23 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_2342 df139fde098916396546a1c75d42701e 1209 SUPERFAMILY SSF51445 704 1014 4.86E-62 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily TF3313_2342 df139fde098916396546a1c75d42701e 1209 Pfam PF00754 F5/8 type C domain 276 366 2.4E-13 T 11-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain TF3313_2342 df139fde098916396546a1c75d42701e 1209 Gene3D G3DSA:2.60.120.260 251 372 9.4E-17 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_2342 df139fde098916396546a1c75d42701e 1209 Pfam PF00703 Glycosyl hydrolases family 2 594 706 1.1E-11 T 11-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 TF3313_2342 df139fde098916396546a1c75d42701e 1209 Gene3D G3DSA:2.60.40.10 591 706 1.6E-27 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_2342 df139fde098916396546a1c75d42701e 1209 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 462 544 1.7E-13 T 11-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 TF3313_2342 df139fde098916396546a1c75d42701e 1209 SUPERFAMILY SSF49785 390 589 1.82E-40 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_2342 df139fde098916396546a1c75d42701e 1209 Gene3D G3DSA:2.60.40.10 1014 1115 1.8E-21 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_2342 df139fde098916396546a1c75d42701e 1209 SUPERFAMILY SSF49785 252 374 2.34E-12 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_2342 df139fde098916396546a1c75d42701e 1209 SUPERFAMILY SSF49303 1096 1209 1.01E-30 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily TF3313_2342 df139fde098916396546a1c75d42701e 1209 SUPERFAMILY SSF49303 592 706 3.24E-19 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily TF3313_2342 df139fde098916396546a1c75d42701e 1209 SUPERFAMILY SSF49303 1014 1112 1.73E-24 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily TF3313_0530 271373002fec3938ac7602d4ddbb9368 600 Gene3D G3DSA:3.80.10.10 39 238 9.9E-47 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily TF3313_0530 271373002fec3938ac7602d4ddbb9368 600 SUPERFAMILY SSF49373 354 435 9.81E-18 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments TF3313_0530 271373002fec3938ac7602d4ddbb9368 600 Gene3D G3DSA:2.60.40.10 239 348 6.6E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_0530 271373002fec3938ac7602d4ddbb9368 600 SUPERFAMILY SSF52058 73 196 2.93E-13 T 11-10-2018 TF3313_0530 271373002fec3938ac7602d4ddbb9368 600 SUPERFAMILY SSF49265 241 315 1.72E-5 T 11-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 TF3313_0530 271373002fec3938ac7602d4ddbb9368 600 SUPERFAMILY SSF49373 443 523 9.02E-18 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments TF3313_0530 271373002fec3938ac7602d4ddbb9368 600 SMART SM00635 444 522 3.3E-12 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_0530 271373002fec3938ac7602d4ddbb9368 600 SMART SM00635 355 432 4.7E-21 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_0530 271373002fec3938ac7602d4ddbb9368 600 Pfam PF02368 Bacterial Ig-like domain (group 2) 355 433 5.7E-18 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_0530 271373002fec3938ac7602d4ddbb9368 600 Pfam PF02368 Bacterial Ig-like domain (group 2) 445 517 6.5E-13 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_0530 271373002fec3938ac7602d4ddbb9368 600 Pfam PF13306 Leucine rich repeats (6 copies) 71 188 3.2E-31 T 11-10-2018 IPR026906 Leucine rich repeat 5 TF3313_0530 271373002fec3938ac7602d4ddbb9368 600 Gene3D G3DSA:2.60.40.1080 351 437 1.3E-26 T 11-10-2018 TF3313_0530 271373002fec3938ac7602d4ddbb9368 600 Gene3D G3DSA:2.60.40.1080 441 527 7.5E-21 T 11-10-2018 TF3313_0733 afe1c8229584d2d259a07a413579a633 876 SUPERFAMILY SSF55186 552 709 1.16E-46 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 TF3313_0733 afe1c8229584d2d259a07a413579a633 876 Pfam PF02272 DHHA1 domain 735 871 4.1E-9 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 TF3313_0733 afe1c8229584d2d259a07a413579a633 876 SMART SM00863 654 696 4.6E-17 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TF3313_0733 afe1c8229584d2d259a07a413579a633 876 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 876 151.759 T 11-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 TF3313_0733 afe1c8229584d2d259a07a413579a633 876 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 6 856 5.1E-264 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TF3313_0733 afe1c8229584d2d259a07a413579a633 876 Gene3D G3DSA:3.30.54.20 624 677 3.0E-50 T 11-10-2018 TF3313_0733 afe1c8229584d2d259a07a413579a633 876 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 654 696 6.4E-16 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TF3313_0733 afe1c8229584d2d259a07a413579a633 876 Gene3D G3DSA:2.40.30.130 467 549 2.4E-10 T 11-10-2018 TF3313_0733 afe1c8229584d2d259a07a413579a633 876 Pfam PF01411 tRNA synthetases class II (A) 6 544 3.0E-192 T 11-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 TF3313_0733 afe1c8229584d2d259a07a413579a633 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 235 248 3.2E-29 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TF3313_0733 afe1c8229584d2d259a07a413579a633 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 309 322 3.2E-29 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TF3313_0733 afe1c8229584d2d259a07a413579a633 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 75 86 3.2E-29 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TF3313_0733 afe1c8229584d2d259a07a413579a633 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 219 3.2E-29 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TF3313_0733 afe1c8229584d2d259a07a413579a633 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 285 301 3.2E-29 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TF3313_0733 afe1c8229584d2d259a07a413579a633 876 Gene3D G3DSA:3.10.310.40 770 872 4.6E-16 T 11-10-2018 TF3313_0733 afe1c8229584d2d259a07a413579a633 876 Gene3D G3DSA:3.30.930.10 1 251 5.1E-109 T 11-10-2018 TF3313_0733 afe1c8229584d2d259a07a413579a633 876 Gene3D G3DSA:3.30.980.10 563 697 3.0E-50 T 11-10-2018 TF3313_0733 afe1c8229584d2d259a07a413579a633 876 SUPERFAMILY SSF55681 3 254 7.45E-97 T 11-10-2018 TF3313_0733 afe1c8229584d2d259a07a413579a633 876 SUPERFAMILY SSF101353 255 456 1.44E-64 T 11-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 TF3313_0733 afe1c8229584d2d259a07a413579a633 876 SUPERFAMILY SSF50447 460 541 2.37E-14 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TF3313_0545 a40cd9d219e686bc49771bc22d0136a8 571 Gene3D G3DSA:3.50.50.60 29 239 3.6E-8 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TF3313_0545 a40cd9d219e686bc49771bc22d0136a8 571 SUPERFAMILY SSF51905 29 194 7.16E-12 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TF3313_0545 a40cd9d219e686bc49771bc22d0136a8 571 Pfam PF12831 FAD dependent oxidoreductase 32 556 2.8E-144 T 11-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal TF3313_1538 6b6589b130e7b15cfa35d3c2a1c0d9eb 260 Pfam PF00106 short chain dehydrogenase 11 193 4.6E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1538 6b6589b130e7b15cfa35d3c2a1c0d9eb 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 3.6E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1538 6b6589b130e7b15cfa35d3c2a1c0d9eb 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.6E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1538 6b6589b130e7b15cfa35d3c2a1c0d9eb 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 3.6E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1538 6b6589b130e7b15cfa35d3c2a1c0d9eb 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.6E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1538 6b6589b130e7b15cfa35d3c2a1c0d9eb 260 Gene3D G3DSA:3.40.50.720 8 256 2.1E-42 T 11-10-2018 TF3313_1538 6b6589b130e7b15cfa35d3c2a1c0d9eb 260 SUPERFAMILY SSF51735 11 248 1.24E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_1694 9a713d803a451de7a904f0d8fa4fcf57 158 Pfam PF02542 YgbB family 1 154 2.8E-63 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TF3313_1694 9a713d803a451de7a904f0d8fa4fcf57 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 35.779 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TF3313_1694 9a713d803a451de7a904f0d8fa4fcf57 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 155 2.1E-63 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TF3313_1694 9a713d803a451de7a904f0d8fa4fcf57 158 Gene3D G3DSA:3.30.1330.50 1 158 6.7E-66 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TF3313_1694 9a713d803a451de7a904f0d8fa4fcf57 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 11-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TF3313_1694 9a713d803a451de7a904f0d8fa4fcf57 158 SUPERFAMILY SSF69765 1 156 2.75E-64 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TF3313_0524 f84d9a328ef7fe4fc50e244f2b3e7d85 213 SMART SM00421 150 207 3.3E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TF3313_0524 f84d9a328ef7fe4fc50e244f2b3e7d85 213 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TF3313_0524 f84d9a328ef7fe4fc50e244f2b3e7d85 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 5.2E-7 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TF3313_0524 f84d9a328ef7fe4fc50e244f2b3e7d85 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 5.2E-7 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TF3313_0524 f84d9a328ef7fe4fc50e244f2b3e7d85 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 5.2E-7 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TF3313_0524 f84d9a328ef7fe4fc50e244f2b3e7d85 213 SUPERFAMILY SSF46894 143 212 5.1E-15 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TF3313_0524 f84d9a328ef7fe4fc50e244f2b3e7d85 213 Gene3D G3DSA:3.40.50.12740 5 213 4.2E-51 T 11-10-2018 TF3313_0524 f84d9a328ef7fe4fc50e244f2b3e7d85 213 Pfam PF00072 Response regulator receiver domain 7 118 5.2E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TF3313_0524 f84d9a328ef7fe4fc50e244f2b3e7d85 213 SUPERFAMILY SSF52172 4 136 3.42E-24 T 11-10-2018 IPR011006 CheY-like superfamily TF3313_0524 f84d9a328ef7fe4fc50e244f2b3e7d85 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 207 5.7E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TF3313_0524 f84d9a328ef7fe4fc50e244f2b3e7d85 213 SMART SM00448 5 118 1.5E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TF3313_0326 821af708ea146a096a2db1f1b4e187eb 1030 Gene3D G3DSA:1.20.1640.10 509 1014 2.1E-210 T 11-10-2018 TF3313_0326 821af708ea146a096a2db1f1b4e187eb 1030 Gene3D G3DSA:3.30.70.1320 132 330 2.1E-210 T 11-10-2018 TF3313_0326 821af708ea146a096a2db1f1b4e187eb 1030 SUPERFAMILY SSF82866 296 492 1.83E-39 T 11-10-2018 TF3313_0326 821af708ea146a096a2db1f1b4e187eb 1030 SUPERFAMILY SSF82693 38 131 3.66E-17 T 11-10-2018 TF3313_0326 821af708ea146a096a2db1f1b4e187eb 1030 Pfam PF00873 AcrB/AcrD/AcrF family 1 1017 3.5E-161 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_0326 821af708ea146a096a2db1f1b4e187eb 1030 Gene3D G3DSA:3.30.70.1430 38 812 2.1E-210 T 11-10-2018 TF3313_0326 821af708ea146a096a2db1f1b4e187eb 1030 SUPERFAMILY SSF82693 152 327 3.03E-7 T 11-10-2018 TF3313_0326 821af708ea146a096a2db1f1b4e187eb 1030 Gene3D G3DSA:3.30.70.1430 564 660 2.1E-210 T 11-10-2018 TF3313_0326 821af708ea146a096a2db1f1b4e187eb 1030 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 1.6E-33 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_0326 821af708ea146a096a2db1f1b4e187eb 1030 PRINTS PR00702 Acriflavin resistance protein family signature 549 566 1.6E-33 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_0326 821af708ea146a096a2db1f1b4e187eb 1030 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.6E-33 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_0326 821af708ea146a096a2db1f1b4e187eb 1030 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 1.6E-33 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_0326 821af708ea146a096a2db1f1b4e187eb 1030 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.6E-33 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_0326 821af708ea146a096a2db1f1b4e187eb 1030 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 1.6E-33 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_0326 821af708ea146a096a2db1f1b4e187eb 1030 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 1.6E-33 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_0326 821af708ea146a096a2db1f1b4e187eb 1030 SUPERFAMILY SSF82714 190 268 5.62E-9 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TF3313_0326 821af708ea146a096a2db1f1b4e187eb 1030 SUPERFAMILY SSF82866 839 1021 8.89E-46 T 11-10-2018 TF3313_0326 821af708ea146a096a2db1f1b4e187eb 1030 Gene3D G3DSA:3.30.70.1440 661 857 2.1E-210 T 11-10-2018 TF3313_0326 821af708ea146a096a2db1f1b4e187eb 1030 Gene3D G3DSA:3.30.2090.10 713 804 2.1E-210 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TF3313_0326 821af708ea146a096a2db1f1b4e187eb 1030 Gene3D G3DSA:3.30.2090.10 185 274 2.1E-210 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TF3313_0326 821af708ea146a096a2db1f1b4e187eb 1030 Gene3D G3DSA:1.20.1640.10 8 508 2.1E-210 T 11-10-2018 TF3313_1635 0b57f7f9584cba3fd51a50b7d0d09b34 602 Gene3D G3DSA:3.40.50.300 1 197 6.1E-64 T 11-10-2018 TF3313_1635 0b57f7f9584cba3fd51a50b7d0d09b34 602 Pfam PF00009 Elongation factor Tu GTP binding domain 3 194 6.8E-56 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TF3313_1635 0b57f7f9584cba3fd51a50b7d0d09b34 602 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 4 595 4.6E-274 T 11-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 TF3313_1635 0b57f7f9584cba3fd51a50b7d0d09b34 602 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 139 2.0E-21 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TF3313_1635 0b57f7f9584cba3fd51a50b7d0d09b34 602 Pfam PF00679 Elongation factor G C-terminus 395 476 3.4E-18 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like TF3313_1635 0b57f7f9584cba3fd51a50b7d0d09b34 602 SUPERFAMILY SSF54980 300 385 1.58E-14 T 11-10-2018 IPR035647 EF-G domain III/V-like TF3313_1635 0b57f7f9584cba3fd51a50b7d0d09b34 602 SUPERFAMILY SSF50447 150 297 2.87E-27 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TF3313_1635 0b57f7f9584cba3fd51a50b7d0d09b34 602 SUPERFAMILY SSF52540 2 198 2.72E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1635 0b57f7f9584cba3fd51a50b7d0d09b34 602 Gene3D G3DSA:2.40.50.250 479 595 1.0E-120 T 11-10-2018 TF3313_1635 0b57f7f9584cba3fd51a50b7d0d09b34 602 PRINTS PR00315 GTP-binding elongation factor signature 70 80 1.1E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TF3313_1635 0b57f7f9584cba3fd51a50b7d0d09b34 602 PRINTS PR00315 GTP-binding elongation factor signature 50 58 1.1E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TF3313_1635 0b57f7f9584cba3fd51a50b7d0d09b34 602 PRINTS PR00315 GTP-binding elongation factor signature 86 97 1.1E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TF3313_1635 0b57f7f9584cba3fd51a50b7d0d09b34 602 PRINTS PR00315 GTP-binding elongation factor signature 122 131 1.1E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TF3313_1635 0b57f7f9584cba3fd51a50b7d0d09b34 602 PRINTS PR00315 GTP-binding elongation factor signature 6 19 1.1E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TF3313_1635 0b57f7f9584cba3fd51a50b7d0d09b34 602 Gene3D G3DSA:3.30.70.870 304 586 1.0E-120 T 11-10-2018 TF3313_1635 0b57f7f9584cba3fd51a50b7d0d09b34 602 Gene3D G3DSA:2.40.30.10 199 297 4.8E-28 T 11-10-2018 TF3313_1635 0b57f7f9584cba3fd51a50b7d0d09b34 602 SUPERFAMILY SSF54980 396 508 3.17E-23 T 11-10-2018 IPR035647 EF-G domain III/V-like TF3313_1635 0b57f7f9584cba3fd51a50b7d0d09b34 602 Gene3D G3DSA:3.30.70.240 387 478 1.0E-120 T 11-10-2018 TF3313_1635 0b57f7f9584cba3fd51a50b7d0d09b34 602 Pfam PF03144 Elongation factor Tu domain 2 217 286 2.2E-7 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 TF3313_1635 0b57f7f9584cba3fd51a50b7d0d09b34 602 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 43 58 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site TF3313_0540 9035067dc2b56aeaf6423d36f6619c24 522 Gene3D G3DSA:1.20.58.100 425 522 5.6E-29 T 11-10-2018 TF3313_0540 9035067dc2b56aeaf6423d36f6619c24 522 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 4 519 3.2E-158 T 11-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 TF3313_0540 9035067dc2b56aeaf6423d36f6619c24 522 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 8.3E-5 T 11-10-2018 TF3313_0540 9035067dc2b56aeaf6423d36f6619c24 522 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 369 376 8.3E-5 T 11-10-2018 TF3313_0540 9035067dc2b56aeaf6423d36f6619c24 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.4E-5 T 11-10-2018 TF3313_0540 9035067dc2b56aeaf6423d36f6619c24 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 354 376 1.4E-5 T 11-10-2018 TF3313_0540 9035067dc2b56aeaf6423d36f6619c24 522 SUPERFAMILY SSF51905 2 430 4.03E-61 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TF3313_0540 9035067dc2b56aeaf6423d36f6619c24 522 Gene3D G3DSA:3.90.700.10 246 357 4.8E-150 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 TF3313_0540 9035067dc2b56aeaf6423d36f6619c24 522 Pfam PF00890 FAD binding domain 6 391 1.5E-90 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 TF3313_0540 9035067dc2b56aeaf6423d36f6619c24 522 Gene3D G3DSA:3.50.50.60 6 403 4.8E-150 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TF3313_0540 9035067dc2b56aeaf6423d36f6619c24 522 SUPERFAMILY SSF46977 425 520 6.02E-24 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TF3313_0540 9035067dc2b56aeaf6423d36f6619c24 522 Pfam PF02910 Fumarate reductase flavoprotein C-term 440 519 1.2E-11 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TF3313_0540 9035067dc2b56aeaf6423d36f6619c24 522 SUPERFAMILY SSF56425 236 351 8.97E-41 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 TF3313_2592 add8cd880c59d19592dbe793d14d4013 253 Gene3D G3DSA:3.40.50.150 27 245 1.7E-59 T 11-10-2018 TF3313_2592 add8cd880c59d19592dbe793d14d4013 253 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 153 167 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 TF3313_2592 add8cd880c59d19592dbe793d14d4013 253 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 21 244 1.4E-75 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 TF3313_2592 add8cd880c59d19592dbe793d14d4013 253 Pfam PF01209 ubiE/COQ5 methyltransferase family 17 244 5.0E-59 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 TF3313_2592 add8cd880c59d19592dbe793d14d4013 253 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 12 244 33.254 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 TF3313_2592 add8cd880c59d19592dbe793d14d4013 253 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 32 47 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 TF3313_2592 add8cd880c59d19592dbe793d14d4013 253 SUPERFAMILY SSF53335 20 230 1.15E-40 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_0959 33ed555c1a67fc6fa40dce57749b0d0b 467 Gene3D G3DSA:1.20.1250.20 243 467 4.5E-58 T 11-10-2018 TF3313_0959 33ed555c1a67fc6fa40dce57749b0d0b 467 Gene3D G3DSA:1.20.1250.20 3 235 5.7E-57 T 11-10-2018 TF3313_0959 33ed555c1a67fc6fa40dce57749b0d0b 467 PRINTS PR00171 Sugar transporter signature 21 31 7.1E-20 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 TF3313_0959 33ed555c1a67fc6fa40dce57749b0d0b 467 PRINTS PR00171 Sugar transporter signature 366 387 7.1E-20 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 TF3313_0959 33ed555c1a67fc6fa40dce57749b0d0b 467 PRINTS PR00171 Sugar transporter signature 389 401 7.1E-20 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 TF3313_0959 33ed555c1a67fc6fa40dce57749b0d0b 467 PRINTS PR00171 Sugar transporter signature 104 123 7.1E-20 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 TF3313_0959 33ed555c1a67fc6fa40dce57749b0d0b 467 PRINTS PR00171 Sugar transporter signature 277 287 7.1E-20 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 TF3313_0959 33ed555c1a67fc6fa40dce57749b0d0b 467 SUPERFAMILY SSF103473 7 463 4.58E-68 T 11-10-2018 IPR036259 MFS transporter superfamily TF3313_0959 33ed555c1a67fc6fa40dce57749b0d0b 467 Pfam PF00083 Sugar (and other) transporter 14 465 1.8E-110 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 TF3313_0959 33ed555c1a67fc6fa40dce57749b0d0b 467 ProSitePatterns PS00216 Sugar transport proteins signature 1. 321 337 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 TF3313_0959 33ed555c1a67fc6fa40dce57749b0d0b 467 ProSitePatterns PS00217 Sugar transport proteins signature 2. 109 134 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 TF3313_0959 33ed555c1a67fc6fa40dce57749b0d0b 467 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 8 461 2.4E-106 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 TF3313_0276 9492deaac13fbf3d106ffe82841867c9 316 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 38 314 4.1E-94 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 TF3313_0276 9492deaac13fbf3d106ffe82841867c9 316 Gene3D G3DSA:3.30.1300.10 215 314 1.1E-24 T 11-10-2018 TF3313_0276 9492deaac13fbf3d106ffe82841867c9 316 SUPERFAMILY SSF52374 33 314 3.92E-101 T 11-10-2018 TF3313_0276 9492deaac13fbf3d106ffe82841867c9 316 Pfam PF02569 Pantoate-beta-alanine ligase 39 314 1.6E-103 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 TF3313_0276 9492deaac13fbf3d106ffe82841867c9 316 Gene3D G3DSA:3.40.50.620 36 214 3.8E-75 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_0276 9492deaac13fbf3d106ffe82841867c9 316 Hamap MF_00158 Pantothenate synthetase [panC]. 39 316 38.35 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 TF3313_0150 34b409db4c19f17688b1310f8d95387e 346 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 87 97 - T 11-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 TF3313_0150 34b409db4c19f17688b1310f8d95387e 346 Pfam PF00710 Asparaginase, N-terminal 10 201 2.9E-62 T 11-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 TF3313_0150 34b409db4c19f17688b1310f8d95387e 346 PRINTS PR00139 Asparaginase/glutaminase family signature 10 21 1.7E-16 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 TF3313_0150 34b409db4c19f17688b1310f8d95387e 346 PRINTS PR00139 Asparaginase/glutaminase family signature 86 104 1.7E-16 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 TF3313_0150 34b409db4c19f17688b1310f8d95387e 346 PRINTS PR00139 Asparaginase/glutaminase family signature 270 288 1.7E-16 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 TF3313_0150 34b409db4c19f17688b1310f8d95387e 346 PIRSF PIRSF500176 6 342 8.5E-96 T 11-10-2018 TF3313_0150 34b409db4c19f17688b1310f8d95387e 346 PIRSF PIRSF001220 4 344 4.1E-91 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 TF3313_0150 34b409db4c19f17688b1310f8d95387e 346 Gene3D G3DSA:3.40.50.1170 3 214 2.3E-71 T 11-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 TF3313_0150 34b409db4c19f17688b1310f8d95387e 346 Gene3D G3DSA:3.40.50.40 216 346 1.5E-42 T 11-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 TF3313_0150 34b409db4c19f17688b1310f8d95387e 346 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 9 345 7.3E-91 T 11-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 TF3313_0150 34b409db4c19f17688b1310f8d95387e 346 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 12 20 - T 11-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 TF3313_0150 34b409db4c19f17688b1310f8d95387e 346 SMART SM00870 9 333 6.6E-117 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 TF3313_0150 34b409db4c19f17688b1310f8d95387e 346 SUPERFAMILY SSF53774 8 345 3.66E-106 T 11-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 TF3313_1332 68f2c15e97118317fc653d2975df7aac 264 SUPERFAMILY SSF56219 37 258 9.55E-32 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TF3313_1332 68f2c15e97118317fc653d2975df7aac 264 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 41 253 8.0E-15 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase TF3313_1332 68f2c15e97118317fc653d2975df7aac 264 Gene3D G3DSA:3.60.10.10 34 263 1.1E-43 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TF3313_0965 276444ed11e97f4789bd06f433d817b9 151 SUPERFAMILY SSF46557 1 72 1.31E-23 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 TF3313_0965 276444ed11e97f4789bd06f433d817b9 151 Gene3D G3DSA:1.10.287.180 1 70 1.6E-26 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 TF3313_0965 276444ed11e97f4789bd06f433d817b9 151 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 77 150 6.4E-22 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 TF3313_0965 276444ed11e97f4789bd06f433d817b9 151 SUPERFAMILY SSF54534 75 149 8.24E-18 T 11-10-2018 TF3313_0965 276444ed11e97f4789bd06f433d817b9 151 Pfam PF03449 Transcription elongation factor, N-terminal 1 68 3.6E-27 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 TF3313_0965 276444ed11e97f4789bd06f433d817b9 151 PIRSF PIRSF006092 1 151 1.1E-47 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 TF3313_0965 276444ed11e97f4789bd06f433d817b9 151 Hamap MF_00105 Transcription elongation factor GreA [greA]. 1 150 28.373 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 TF3313_0965 276444ed11e97f4789bd06f433d817b9 151 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 1 150 5.8E-52 T 11-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 TF3313_0965 276444ed11e97f4789bd06f433d817b9 151 Gene3D G3DSA:3.10.50.30 71 151 1.0E-21 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 TF3313_0965 276444ed11e97f4789bd06f433d817b9 151 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 12 43 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 TF3313_2348 0044ff3124beff46550a14f5d2d81071 815 Gene3D G3DSA:3.40.50.300 431 718 5.3E-92 T 11-10-2018 TF3313_2348 0044ff3124beff46550a14f5d2d81071 815 SMART SM00843 738 803 1.5E-37 T 11-10-2018 IPR018541 FtsK gamma domain TF3313_2348 0044ff3124beff46550a14f5d2d81071 815 Pfam PF09397 Ftsk gamma domain 740 800 1.3E-28 T 11-10-2018 IPR018541 FtsK gamma domain TF3313_2348 0044ff3124beff46550a14f5d2d81071 815 SUPERFAMILY SSF52540 406 705 2.58E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2348 0044ff3124beff46550a14f5d2d81071 815 Pfam PF01580 FtsK/SpoIIIE family 437 578 2.6E-33 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 TF3313_2348 0044ff3124beff46550a14f5d2d81071 815 Pfam PF01580 FtsK/SpoIIIE family 589 637 1.3E-11 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 TF3313_2348 0044ff3124beff46550a14f5d2d81071 815 Gene3D G3DSA:3.30.980.40 326 430 1.8E-32 T 11-10-2018 TF3313_2348 0044ff3124beff46550a14f5d2d81071 815 Gene3D G3DSA:1.10.10.10 742 804 3.1E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_2348 0044ff3124beff46550a14f5d2d81071 815 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 30 198 7.0E-14 T 11-10-2018 IPR025199 DNA translocase FtsK, 4TM region TF3313_2348 0044ff3124beff46550a14f5d2d81071 815 SUPERFAMILY SSF46785 739 802 1.77E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TF3313_0501 44f10f088d3ba8c719b3a2a2c6451f11 243 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 3 206 29.334 T 11-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 TF3313_0501 44f10f088d3ba8c719b3a2a2c6451f11 243 Gene3D G3DSA:3.20.20.380 2 242 2.1E-91 T 11-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 TF3313_0501 44f10f088d3ba8c719b3a2a2c6451f11 243 SUPERFAMILY SSF110395 4 240 3.14E-69 T 11-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 TF3313_0501 44f10f088d3ba8c719b3a2a2c6451f11 243 Pfam PF03932 CutC family 4 204 6.7E-76 T 11-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 TF3313_2366 4db08fee01713aa3b6661113522dbc66 193 Pfam PF02589 LUD domain 96 193 5.4E-11 T 11-10-2018 IPR003741 LUD domain TF3313_2366 4db08fee01713aa3b6661113522dbc66 193 SUPERFAMILY SSF100950 31 193 6.7E-26 T 11-10-2018 IPR037171 NagB/RpiA transferase-like TF3313_2366 4db08fee01713aa3b6661113522dbc66 193 Gene3D G3DSA:3.40.50.10420 33 193 2.1E-22 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily TF3313_1383 e9f86aeab42f5a14677c43ceb4e24019 458 SUPERFAMILY SSF48452 251 387 4.74E-23 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1383 e9f86aeab42f5a14677c43ceb4e24019 458 Pfam PF07719 Tetratricopeptide repeat 265 296 9.5E-7 T 11-10-2018 IPR013105 Tetratricopeptide repeat 2 TF3313_1383 e9f86aeab42f5a14677c43ceb4e24019 458 SUPERFAMILY SSF48452 368 438 6.83E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1383 e9f86aeab42f5a14677c43ceb4e24019 458 Pfam PF13432 Tetratricopeptide repeat 2 45 2.5E-4 T 11-10-2018 TF3313_1383 e9f86aeab42f5a14677c43ceb4e24019 458 Pfam PF13181 Tetratricopeptide repeat 93 121 0.066 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1383 e9f86aeab42f5a14677c43ceb4e24019 458 Pfam PF13181 Tetratricopeptide repeat 303 334 7.3E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1383 e9f86aeab42f5a14677c43ceb4e24019 458 Gene3D G3DSA:1.25.40.10 301 452 2.0E-24 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1383 e9f86aeab42f5a14677c43ceb4e24019 458 Gene3D G3DSA:1.25.40.10 59 211 6.7E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1383 e9f86aeab42f5a14677c43ceb4e24019 458 SMART SM00028 302 335 2.2E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1383 e9f86aeab42f5a14677c43ceb4e24019 458 SMART SM00028 263 296 3.1E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1383 e9f86aeab42f5a14677c43ceb4e24019 458 SMART SM00028 229 262 8.7 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1383 e9f86aeab42f5a14677c43ceb4e24019 458 SMART SM00028 371 404 500.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1383 e9f86aeab42f5a14677c43ceb4e24019 458 SMART SM00028 406 439 96.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1383 e9f86aeab42f5a14677c43ceb4e24019 458 SMART SM00028 122 155 270.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1383 e9f86aeab42f5a14677c43ceb4e24019 458 SMART SM00028 195 228 170.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1383 e9f86aeab42f5a14677c43ceb4e24019 458 SMART SM00028 20 53 470.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1383 e9f86aeab42f5a14677c43ceb4e24019 458 SMART SM00028 88 121 0.19 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1383 e9f86aeab42f5a14677c43ceb4e24019 458 Gene3D G3DSA:1.25.40.10 212 300 2.8E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1383 e9f86aeab42f5a14677c43ceb4e24019 458 SUPERFAMILY SSF48452 3 296 2.4E-32 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1383 e9f86aeab42f5a14677c43ceb4e24019 458 Pfam PF14559 Tetratricopeptide repeat 178 236 6.8E-6 T 11-10-2018 TF3313_1383 e9f86aeab42f5a14677c43ceb4e24019 458 Gene3D G3DSA:1.25.40.10 1 55 1.3E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2429 62316559faf56481a1b287c311bb239b 191 SUPERFAMILY SSF89028 1 180 1.51E-53 T 11-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 TF3313_2429 62316559faf56481a1b287c311bb239b 191 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 179 7.2E-46 T 11-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 TF3313_2429 62316559faf56481a1b287c311bb239b 191 Pfam PF01923 Cobalamin adenosyltransferase 3 167 2.6E-49 T 11-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 TF3313_2429 62316559faf56481a1b287c311bb239b 191 Gene3D G3DSA:1.20.1200.10 12 186 9.6E-50 T 11-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 TF3313_2429 62316559faf56481a1b287c311bb239b 191 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 180 1.0E-43 T 11-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 TF3313_1679 ec12c3dd6285a0446a1033c697b1c0b7 252 Pfam PF12864 Protein of unknown function (DUF3822) 1 226 7.3E-52 T 11-10-2018 IPR024213 Protein of unknown function DUF3822 TF3313_1679 ec12c3dd6285a0446a1033c697b1c0b7 252 Gene3D G3DSA:3.30.420.250 1 129 1.1E-28 T 11-10-2018 TF3313_1679 ec12c3dd6285a0446a1033c697b1c0b7 252 Gene3D G3DSA:3.30.420.260 132 239 3.7E-26 T 11-10-2018 TF3313_2411 2e3001c2df4b014fff423a08e7660991 442 SUPERFAMILY SSF142019 102 294 1.1E-54 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TF3313_2411 2e3001c2df4b014fff423a08e7660991 442 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 442 142.181 T 11-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 TF3313_2411 2e3001c2df4b014fff423a08e7660991 442 Pfam PF10531 SLBB domain 287 334 5.2E-14 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TF3313_2411 2e3001c2df4b014fff423a08e7660991 442 SUPERFAMILY SSF46548 326 431 4.01E-16 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TF3313_2411 2e3001c2df4b014fff423a08e7660991 442 Pfam PF13375 RnfC Barrel sandwich hybrid domain 7 100 2.4E-27 T 11-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain TF3313_2411 2e3001c2df4b014fff423a08e7660991 442 Gene3D G3DSA:1.10.1060.10 355 433 1.2E-8 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TF3313_2411 2e3001c2df4b014fff423a08e7660991 442 Pfam PF13237 4Fe-4S dicluster domain 361 417 3.7E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TF3313_2411 2e3001c2df4b014fff423a08e7660991 442 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 2 435 6.1E-173 T 11-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 TF3313_2411 2e3001c2df4b014fff423a08e7660991 442 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 367 378 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TF3313_2411 2e3001c2df4b014fff423a08e7660991 442 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 129 275 1.7E-48 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TF3313_2411 2e3001c2df4b014fff423a08e7660991 442 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 406 417 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TF3313_2411 2e3001c2df4b014fff423a08e7660991 442 Gene3D G3DSA:3.40.50.11540 134 281 6.9E-11 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TF3313_2300 34648f3860bd3b5bb1cb65f287441075 174 Pfam PF08984 Domain of unknown function (DUF1858) 8 67 2.6E-16 T 11-10-2018 IPR015077 Domain of unknown function DUF1858 TF3313_2300 34648f3860bd3b5bb1cb65f287441075 174 SUPERFAMILY SSF140683 7 80 2.48E-14 T 11-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily TF3313_2300 34648f3860bd3b5bb1cb65f287441075 174 Gene3D G3DSA:1.10.3910.10 3 80 6.7E-14 T 11-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily TF3313_2300 34648f3860bd3b5bb1cb65f287441075 174 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 106 174 2.4E-13 T 11-10-2018 IPR018720 Domain of unknown function DUF2249 TF3313_1227 b559825077a7f96d4245a0aab00d231f 201 SUPERFAMILY SSF116734 8 190 1.08E-39 T 11-10-2018 TF3313_1227 b559825077a7f96d4245a0aab00d231f 201 Gene3D G3DSA:3.90.220.20 9 139 1.9E-33 T 11-10-2018 TF3313_1227 b559825077a7f96d4245a0aab00d231f 201 Pfam PF01420 Type I restriction modification DNA specificity domain 14 172 7.6E-25 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 TF3313_1051 0428227caeeeb6db23865708642c1eff 990 Gene3D G3DSA:3.30.1490.20 422 602 1.0E-13 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TF3313_1051 0428227caeeeb6db23865708642c1eff 990 SUPERFAMILY SSF56059 426 800 2.0E-23 T 11-10-2018 TF3313_1051 0428227caeeeb6db23865708642c1eff 990 Gene3D G3DSA:3.40.50.2300 38 156 2.2E-5 T 11-10-2018 TF3313_1051 0428227caeeeb6db23865708642c1eff 990 SUPERFAMILY SSF52172 64 156 3.73E-7 T 11-10-2018 IPR011006 CheY-like superfamily TF3313_1051 0428227caeeeb6db23865708642c1eff 990 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 434 807 3.7E-47 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 TF3313_0971 b33329c7edd89804b0c4296feb7c4d04 751 SMART SM00316 635 707 2.6E-21 T 11-10-2018 IPR022967 RNA-binding domain, S1 TF3313_0971 b33329c7edd89804b0c4296feb7c4d04 751 Pfam PF01138 3' exoribonuclease family, domain 1 24 154 7.7E-20 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TF3313_0971 b33329c7edd89804b0c4296feb7c4d04 751 Pfam PF01138 3' exoribonuclease family, domain 1 336 466 3.5E-19 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TF3313_0971 b33329c7edd89804b0c4296feb7c4d04 751 PIRSF PIRSF005499 10 738 7.4E-282 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TF3313_0971 b33329c7edd89804b0c4296feb7c4d04 751 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 264 332 1.7E-11 T 11-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TF3313_0971 b33329c7edd89804b0c4296feb7c4d04 751 SUPERFAMILY SSF55666 460 560 8.69E-27 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TF3313_0971 b33329c7edd89804b0c4296feb7c4d04 751 SUPERFAMILY SSF54791 560 635 6.01E-15 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 TF3313_0971 b33329c7edd89804b0c4296feb7c4d04 751 Pfam PF00013 KH domain 568 628 1.9E-10 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 TF3313_0971 b33329c7edd89804b0c4296feb7c4d04 751 SUPERFAMILY SSF55666 148 240 7.85E-25 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TF3313_0971 b33329c7edd89804b0c4296feb7c4d04 751 SUPERFAMILY SSF54211 306 500 6.58E-48 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TF3313_0971 b33329c7edd89804b0c4296feb7c4d04 751 Pfam PF00575 S1 RNA binding domain 634 707 1.9E-16 T 11-10-2018 IPR003029 S1 domain GO:0003676 TF3313_0971 b33329c7edd89804b0c4296feb7c4d04 751 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 12 710 28.845 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TF3313_0971 b33329c7edd89804b0c4296feb7c4d04 751 Gene3D G3DSA:3.30.1370.10 562 632 4.2E-16 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 TF3313_0971 b33329c7edd89804b0c4296feb7c4d04 751 Pfam PF03725 3' exoribonuclease family, domain 2 158 221 2.3E-12 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TF3313_0971 b33329c7edd89804b0c4296feb7c4d04 751 Pfam PF03725 3' exoribonuclease family, domain 2 470 541 9.3E-7 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TF3313_0971 b33329c7edd89804b0c4296feb7c4d04 751 SUPERFAMILY SSF46915 241 337 1.83E-19 T 11-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TF3313_0971 b33329c7edd89804b0c4296feb7c4d04 751 SMART SM00322 564 632 8.8E-11 T 11-10-2018 IPR004087 K Homology domain GO:0003676 TF3313_0971 b33329c7edd89804b0c4296feb7c4d04 751 SUPERFAMILY SSF54211 22 154 8.1E-42 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TF3313_0971 b33329c7edd89804b0c4296feb7c4d04 751 Gene3D G3DSA:3.30.230.70 2 240 1.6E-73 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TF3313_0971 b33329c7edd89804b0c4296feb7c4d04 751 Gene3D G3DSA:3.30.230.70 243 561 1.8E-106 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TF3313_0971 b33329c7edd89804b0c4296feb7c4d04 751 Gene3D G3DSA:2.40.50.140 634 709 2.7E-24 T 11-10-2018 TF3313_0971 b33329c7edd89804b0c4296feb7c4d04 751 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 23 708 6.8E-282 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TF3313_0971 b33329c7edd89804b0c4296feb7c4d04 751 SUPERFAMILY SSF50249 624 711 2.31E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TF3313_2942 22bc6af847d443564233602a8d29325f 561 ProSitePatterns PS00211 ABC transporters family signature. 171 185 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TF3313_2942 22bc6af847d443564233602a8d29325f 561 Pfam PF00005 ABC transporter 348 481 2.9E-19 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TF3313_2942 22bc6af847d443564233602a8d29325f 561 Pfam PF00005 ABC transporter 25 199 1.5E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TF3313_2942 22bc6af847d443564233602a8d29325f 561 Pfam PF12848 ABC transporter 238 307 7.0E-10 T 11-10-2018 IPR032781 ABC-transporter extension domain TF3313_2942 22bc6af847d443564233602a8d29325f 561 Gene3D G3DSA:3.40.50.300 294 558 7.6E-66 T 11-10-2018 TF3313_2942 22bc6af847d443564233602a8d29325f 561 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 6 559 1.5E-281 T 11-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 TF3313_2942 22bc6af847d443564233602a8d29325f 561 SMART SM00382 356 534 6.8E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_2942 22bc6af847d443564233602a8d29325f 561 SMART SM00382 34 244 1.6E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_2942 22bc6af847d443564233602a8d29325f 561 SUPERFAMILY SSF52540 311 538 1.03E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2942 22bc6af847d443564233602a8d29325f 561 SUPERFAMILY SSF52540 12 244 1.08E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2942 22bc6af847d443564233602a8d29325f 561 Gene3D G3DSA:3.40.50.300 5 293 3.2E-77 T 11-10-2018 TF3313_0218 d26d27a832490f0bc3364f80e2460aa0 568 Gene3D G3DSA:1.20.140.10 285 447 3.7E-47 T 11-10-2018 TF3313_0218 d26d27a832490f0bc3364f80e2460aa0 568 SUPERFAMILY SSF56645 48 270 2.09E-50 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TF3313_0218 d26d27a832490f0bc3364f80e2460aa0 568 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 444 1.3E-30 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TF3313_0218 d26d27a832490f0bc3364f80e2460aa0 568 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 173 268 4.7E-27 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TF3313_0218 d26d27a832490f0bc3364f80e2460aa0 568 SUPERFAMILY SSF158494 443 562 2.35E-40 T 11-10-2018 IPR036797 Acyl-CoA dehydrogenase, C-terminal domain superfamily TF3313_0218 d26d27a832490f0bc3364f80e2460aa0 568 Pfam PF12186 Acyl-CoA dehydrogenase C terminal 452 562 3.6E-40 T 11-10-2018 IPR020964 Acyl-CoA dehydrogenase, C-terminal TF3313_0218 d26d27a832490f0bc3364f80e2460aa0 568 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 52 169 1.0E-16 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TF3313_0218 d26d27a832490f0bc3364f80e2460aa0 568 SUPERFAMILY SSF47203 283 452 4.03E-40 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TF3313_0218 d26d27a832490f0bc3364f80e2460aa0 568 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 410 429 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TF3313_0218 d26d27a832490f0bc3364f80e2460aa0 568 Gene3D G3DSA:1.20.120.470 448 568 6.5E-47 T 11-10-2018 IPR036797 Acyl-CoA dehydrogenase, C-terminal domain superfamily TF3313_0218 d26d27a832490f0bc3364f80e2460aa0 568 Gene3D G3DSA:1.10.540.10 45 170 2.2E-20 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TF3313_0218 d26d27a832490f0bc3364f80e2460aa0 568 Gene3D G3DSA:2.40.110.10 172 284 1.1E-26 T 11-10-2018 TF3313_1593 a10e145bc59f4fe5bc001a618d5d54c3 423 Pfam PF03471 Transporter associated domain 345 421 1.1E-17 T 11-10-2018 IPR005170 Transporter-associated domain TF3313_1593 a10e145bc59f4fe5bc001a618d5d54c3 423 Pfam PF00571 CBS domain 280 329 4.7E-6 T 11-10-2018 IPR000644 CBS domain TF3313_1593 a10e145bc59f4fe5bc001a618d5d54c3 423 Gene3D G3DSA:3.30.465.10 344 423 4.2E-24 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TF3313_1593 a10e145bc59f4fe5bc001a618d5d54c3 423 SUPERFAMILY SSF54631 199 332 6.6E-24 T 11-10-2018 TF3313_1593 a10e145bc59f4fe5bc001a618d5d54c3 423 SMART SM01091 343 423 2.8E-19 T 11-10-2018 IPR005170 Transporter-associated domain TF3313_1593 a10e145bc59f4fe5bc001a618d5d54c3 423 Pfam PF01595 Domain of unknown function DUF21 5 193 3.1E-45 T 11-10-2018 IPR002550 CNNM, transmembrane domain TF3313_1593 a10e145bc59f4fe5bc001a618d5d54c3 423 SUPERFAMILY SSF56176 345 421 1.42E-18 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TF3313_1593 a10e145bc59f4fe5bc001a618d5d54c3 423 Gene3D G3DSA:3.10.580.10 193 343 3.1E-41 T 11-10-2018 TF3313_1104 ee797a936955d9110b0517aec34446d3 684 SUPERFAMILY SSF51445 26 348 7.07E-86 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily TF3313_1104 ee797a936955d9110b0517aec34446d3 684 Pfam PF13287 Fn3 associated 507 556 1.2E-8 T 11-10-2018 IPR026876 Fn3 associated repeat TF3313_1104 ee797a936955d9110b0517aec34446d3 684 SUPERFAMILY SSF49785 351 481 7.73E-18 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_1104 ee797a936955d9110b0517aec34446d3 684 SMART SM00812 31 369 4.6E-11 T 11-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 TF3313_1104 ee797a936955d9110b0517aec34446d3 684 Gene3D G3DSA:2.60.120.260 552 676 2.2E-10 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_1104 ee797a936955d9110b0517aec34446d3 684 Gene3D G3DSA:2.60.120.260 362 482 2.0E-30 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_1104 ee797a936955d9110b0517aec34446d3 684 Gene3D G3DSA:3.20.20.80 25 357 6.9E-121 T 11-10-2018 TF3313_1104 ee797a936955d9110b0517aec34446d3 684 Pfam PF00754 F5/8 type C domain 361 468 5.3E-9 T 11-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain TF3313_1104 ee797a936955d9110b0517aec34446d3 684 Pfam PF01120 Alpha-L-fucosidase 36 342 8.9E-35 T 11-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 TF3313_1104 ee797a936955d9110b0517aec34446d3 684 SUPERFAMILY SSF49785 558 679 7.47E-9 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_1095 12f416f1fe72663f68639436ef0b3ca3 806 Gene3D G3DSA:1.10.390.10 363 525 2.7E-30 T 11-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily TF3313_1095 12f416f1fe72663f68639436ef0b3ca3 806 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 761 806 1.3E-6 T 11-10-2018 IPR026444 Secretion system C-terminal sorting domain TF3313_1095 12f416f1fe72663f68639436ef0b3ca3 806 Gene3D G3DSA:3.10.170.10 206 360 2.9E-31 T 11-10-2018 TF3313_1095 12f416f1fe72663f68639436ef0b3ca3 806 SUPERFAMILY SSF55486 204 526 2.93E-49 T 11-10-2018 TF3313_1095 12f416f1fe72663f68639436ef0b3ca3 806 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 369 525 4.0E-26 T 11-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 TF3313_1095 12f416f1fe72663f68639436ef0b3ca3 806 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 434 450 4.0E-7 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 TF3313_1095 12f416f1fe72663f68639436ef0b3ca3 806 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 368 379 4.0E-7 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 TF3313_1095 12f416f1fe72663f68639436ef0b3ca3 806 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 311 331 4.0E-7 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 TF3313_1095 12f416f1fe72663f68639436ef0b3ca3 806 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 347 363 4.0E-7 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 TF3313_1095 12f416f1fe72663f68639436ef0b3ca3 806 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 208 355 1.9E-26 T 11-10-2018 IPR013856 Peptidase M4 domain GO:0004222 TF3313_1095 12f416f1fe72663f68639436ef0b3ca3 806 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 72 112 1.2E-6 T 11-10-2018 IPR011096 FTP domain TF3313_1486 a3d9d12acd06370af4474a6030d946b2 308 TIGRFAM TIGR03814 Gln_ase: glutaminase A 12 308 2.0E-121 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 TF3313_1486 a3d9d12acd06370af4474a6030d946b2 308 Hamap MF_00313 Glutaminase [glsA]. 7 308 42.623 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 TF3313_1486 a3d9d12acd06370af4474a6030d946b2 308 SUPERFAMILY SSF56601 6 308 1.65E-103 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TF3313_1486 a3d9d12acd06370af4474a6030d946b2 308 Gene3D G3DSA:3.40.710.10 3 308 4.0E-108 T 11-10-2018 TF3313_1486 a3d9d12acd06370af4474a6030d946b2 308 Pfam PF04960 Glutaminase 25 308 2.7E-111 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 TF3313_0997 901950bc7546e45ca3d9bf578d7f7316 386 SUPERFAMILY SSF53756 1 372 7.53E-96 T 11-10-2018 TF3313_0997 901950bc7546e45ca3d9bf578d7f7316 386 TIGRFAM TIGR03568 NeuC_NnaA: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing 2 368 9.7E-144 T 11-10-2018 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing GO:0004553|GO:0006047 Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 TF3313_0997 901950bc7546e45ca3d9bf578d7f7316 386 Gene3D G3DSA:3.40.50.2000 3 366 6.2E-86 T 11-10-2018 TF3313_0997 901950bc7546e45ca3d9bf578d7f7316 386 Gene3D G3DSA:3.40.50.2000 189 355 6.2E-86 T 11-10-2018 TF3313_0997 901950bc7546e45ca3d9bf578d7f7316 386 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 25 369 4.8E-87 T 11-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 TF3313_0352 60b214a95663f51cfcbdb8b8a7a0d862 497 Gene3D G3DSA:3.40.1080.20 332 470 1.2E-35 T 11-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily TF3313_0352 60b214a95663f51cfcbdb8b8a7a0d862 497 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 5 211 2.4E-39 T 11-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 TF3313_0352 60b214a95663f51cfcbdb8b8a7a0d862 497 Gene3D G3DSA:3.40.1080.10 2 172 7.4E-12 T 11-10-2018 TF3313_0352 60b214a95663f51cfcbdb8b8a7a0d862 497 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 2 488 7.1E-225 T 11-10-2018 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 TF3313_0352 60b214a95663f51cfcbdb8b8a7a0d862 497 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 315 459 1.9E-39 T 11-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain TF3313_0352 60b214a95663f51cfcbdb8b8a7a0d862 497 SUPERFAMILY SSF100950 4 213 6.05E-61 T 11-10-2018 IPR037171 NagB/RpiA transferase-like TF3313_0352 60b214a95663f51cfcbdb8b8a7a0d862 497 SUPERFAMILY SSF100950 220 489 6.98E-73 T 11-10-2018 IPR037171 NagB/RpiA transferase-like TF3313_0352 60b214a95663f51cfcbdb8b8a7a0d862 497 Gene3D G3DSA:3.30.750.70 219 313 5.6E-5 T 11-10-2018 TF3313_0984 c2ee758268a3733bd973e2788fa50788 449 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 275 361 2.3E-19 T 11-10-2018 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain TF3313_0984 c2ee758268a3733bd973e2788fa50788 449 Pfam PF13412 Winged helix-turn-helix DNA-binding 385 431 3.2E-9 T 11-10-2018 TF3313_0984 c2ee758268a3733bd973e2788fa50788 449 Gene3D G3DSA:3.30.565.60 201 364 8.9E-40 T 11-10-2018 IPR038475 RecG, C-terminal domain superfamily TF3313_0984 c2ee758268a3733bd973e2788fa50788 449 SUPERFAMILY SSF46785 384 442 2.9E-10 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TF3313_0984 c2ee758268a3733bd973e2788fa50788 449 Gene3D G3DSA:1.10.10.10 366 443 7.3E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_0984 c2ee758268a3733bd973e2788fa50788 449 Gene3D G3DSA:3.30.950.30 1 108 7.0E-20 T 11-10-2018 IPR038461 Schlafen, AAA domain superfamily TF3313_0984 c2ee758268a3733bd973e2788fa50788 449 Pfam PF04326 Putative DNA-binding domain 4 108 8.9E-15 T 11-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 TF3313_0984 c2ee758268a3733bd973e2788fa50788 449 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 401 412 1.0E-6 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TF3313_0984 c2ee758268a3733bd973e2788fa50788 449 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 385 401 1.0E-6 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TF3313_0984 c2ee758268a3733bd973e2788fa50788 449 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 412 431 1.0E-6 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TF3313_1255 523f7669d12587f7e8f619255b46d70c 276 SUPERFAMILY SSF51366 4 260 1.16E-74 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 TF3313_1255 523f7669d12587f7e8f619255b46d70c 276 Gene3D G3DSA:3.20.20.70 5 272 8.4E-89 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_1255 523f7669d12587f7e8f619255b46d70c 276 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 7 257 3.1E-69 T 11-10-2018 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TF3313_1255 523f7669d12587f7e8f619255b46d70c 276 SMART SM00934 18 257 3.4E-44 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TF3313_1255 523f7669d12587f7e8f619255b46d70c 276 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 19 256 1.8E-29 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TF3313_1255 523f7669d12587f7e8f619255b46d70c 276 Hamap MF_01215 Orotidine 5'-phosphate decarboxylase [pyrF]. 3 270 31.66 T 11-10-2018 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TF3313_2455 cb526eb779a7cc7f810c3b7781fd7657 499 Gene3D G3DSA:1.20.1250.20 264 496 1.8E-61 T 11-10-2018 TF3313_2455 cb526eb779a7cc7f810c3b7781fd7657 499 ProSitePatterns PS00216 Sugar transport proteins signature 1. 338 355 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 TF3313_2455 cb526eb779a7cc7f810c3b7781fd7657 499 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 7 482 2.1E-112 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 TF3313_2455 cb526eb779a7cc7f810c3b7781fd7657 499 SUPERFAMILY SSF103473 7 484 9.42E-59 T 11-10-2018 IPR036259 MFS transporter superfamily TF3313_2455 cb526eb779a7cc7f810c3b7781fd7657 499 Pfam PF00083 Sugar (and other) transporter 16 487 1.3E-116 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 TF3313_2455 cb526eb779a7cc7f810c3b7781fd7657 499 Gene3D G3DSA:1.20.1250.20 5 258 1.2E-58 T 11-10-2018 TF3313_2455 cb526eb779a7cc7f810c3b7781fd7657 499 PRINTS PR00171 Sugar transporter signature 123 142 8.3E-26 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 TF3313_2455 cb526eb779a7cc7f810c3b7781fd7657 499 PRINTS PR00171 Sugar transporter signature 296 306 8.3E-26 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 TF3313_2455 cb526eb779a7cc7f810c3b7781fd7657 499 PRINTS PR00171 Sugar transporter signature 23 33 8.3E-26 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 TF3313_2455 cb526eb779a7cc7f810c3b7781fd7657 499 PRINTS PR00171 Sugar transporter signature 380 401 8.3E-26 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 TF3313_2455 cb526eb779a7cc7f810c3b7781fd7657 499 PRINTS PR00171 Sugar transporter signature 403 415 8.3E-26 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 TF3313_2455 cb526eb779a7cc7f810c3b7781fd7657 499 ProSitePatterns PS00217 Sugar transport proteins signature 2. 128 153 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 TF3313_2070 81e5d4832b0ae7c20d88c5ff009eaf04 152 SUPERFAMILY SSF56037 2 102 1.67E-13 T 11-10-2018 TF3313_2070 81e5d4832b0ae7c20d88c5ff009eaf04 152 Pfam PF03483 B3/4 domain 2 71 1.2E-6 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 TF3313_0507 c9901badedf17eb3af143091a9253438 353 Pfam PF13186 Iron-sulfur cluster-binding domain 237 300 5.1E-11 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain TF3313_0507 c9901badedf17eb3af143091a9253438 353 Pfam PF04055 Radical SAM superfamily 13 151 5.5E-12 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TF3313_0507 c9901badedf17eb3af143091a9253438 353 SUPERFAMILY SSF102114 6 299 3.27E-44 T 11-10-2018 TF3313_0507 c9901badedf17eb3af143091a9253438 353 Gene3D G3DSA:3.20.20.70 6 298 7.0E-38 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_2398 6cd0114ca54c6d41aaa783088e18f736 635 Gene3D G3DSA:3.20.20.240 39 491 1.8E-126 T 11-10-2018 TF3313_2398 6cd0114ca54c6d41aaa783088e18f736 635 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 373 398 - T 11-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 TF3313_2398 6cd0114ca54c6d41aaa783088e18f736 635 TIGRFAM TIGR00642 mmCoA_mut_beta: methylmalonyl-CoA mutase, small subunit 7 632 1.6E-203 T 11-10-2018 IPR004608 Methylmalonyl-CoA mutase, beta chain GO:0004494|GO:0019652|GO:0031419 KEGG: 00280+5.4.99.2|KEGG: 00630+5.4.99.2|KEGG: 00640+5.4.99.2|KEGG: 00720+5.4.99.2|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|MetaCyc: PWY-7854 TF3313_2398 6cd0114ca54c6d41aaa783088e18f736 635 SUPERFAMILY SSF51703 6 541 2.04E-128 T 11-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 TF3313_2398 6cd0114ca54c6d41aaa783088e18f736 635 Gene3D G3DSA:3.40.50.280 504 634 2.0E-23 T 11-10-2018 TF3313_2398 6cd0114ca54c6d41aaa783088e18f736 635 Pfam PF01642 Methylmalonyl-CoA mutase 40 549 6.0E-149 T 11-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 TF3313_0162 d1a8444cda633d68dcbc99a181070270 209 Gene3D G3DSA:1.10.150.240 17 88 2.1E-64 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 TF3313_0162 d1a8444cda633d68dcbc99a181070270 209 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 122 190 3.2E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TF3313_0162 d1a8444cda633d68dcbc99a181070270 209 SUPERFAMILY SSF56784 5 200 1.69E-31 T 11-10-2018 IPR036412 HAD-like superfamily TF3313_0162 d1a8444cda633d68dcbc99a181070270 209 Gene3D G3DSA:3.40.50.1000 3 198 2.1E-64 T 11-10-2018 IPR023214 HAD superfamily TF3313_0162 d1a8444cda633d68dcbc99a181070270 209 Pfam PF13419 Haloacid dehalogenase-like hydrolase 96 189 5.3E-8 T 11-10-2018 TF3313_0162 d1a8444cda633d68dcbc99a181070270 209 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 8.5E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TF3313_0162 d1a8444cda633d68dcbc99a181070270 209 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 8.5E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TF3313_0162 d1a8444cda633d68dcbc99a181070270 209 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 181 194 8.5E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TF3313_0162 d1a8444cda633d68dcbc99a181070270 209 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 8.5E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TF3313_2664 fd59a2b5e869e14d1febde992f044514 242 Gene3D G3DSA:3.40.50.720 2 240 7.7E-63 T 11-10-2018 TF3313_2664 fd59a2b5e869e14d1febde992f044514 242 SUPERFAMILY SSF51735 3 240 9.21E-62 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_2664 fd59a2b5e869e14d1febde992f044514 242 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 239 4.2E-46 T 11-10-2018 TF3313_2664 fd59a2b5e869e14d1febde992f044514 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.0E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_2664 fd59a2b5e869e14d1febde992f044514 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 2.0E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_2664 fd59a2b5e869e14d1febde992f044514 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 2.0E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_2664 fd59a2b5e869e14d1febde992f044514 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.0E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_2664 fd59a2b5e869e14d1febde992f044514 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 2.0E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_2664 fd59a2b5e869e14d1febde992f044514 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 2.0E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1636 20b1bc3278e3d59e2bcdc61e82dfea8f 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1636 20b1bc3278e3d59e2bcdc61e82dfea8f 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 6.8E-32 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1636 20b1bc3278e3d59e2bcdc61e82dfea8f 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 6.0E-32 T 11-10-2018 TF3313_1636 20b1bc3278e3d59e2bcdc61e82dfea8f 89 SMART SM01387 7 88 2.2E-44 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1636 20b1bc3278e3d59e2bcdc61e82dfea8f 89 Pfam PF00312 Ribosomal protein S15 8 88 1.4E-32 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1636 20b1bc3278e3d59e2bcdc61e82dfea8f 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 20.885 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1636 20b1bc3278e3d59e2bcdc61e82dfea8f 89 Gene3D G3DSA:1.10.287.10 2 89 4.4E-30 T 11-10-2018 TF3313_1636 20b1bc3278e3d59e2bcdc61e82dfea8f 89 SUPERFAMILY SSF47060 3 89 1.8E-32 T 11-10-2018 IPR009068 S15/NS1, RNA-binding TF3313_0627 b85f725421ad176c33e67a5fe79e0f9d 122 SUPERFAMILY SSF52980 10 104 2.9E-23 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 TF3313_0627 b85f725421ad176c33e67a5fe79e0f9d 122 Pfam PF02021 Uncharacterised protein family UPF0102 11 99 1.2E-24 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 TF3313_0627 b85f725421ad176c33e67a5fe79e0f9d 122 Gene3D G3DSA:3.40.1350.10 10 119 1.9E-26 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 TF3313_0627 b85f725421ad176c33e67a5fe79e0f9d 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 4 113 17.819 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 TF3313_0795 e6653f415c003dbaf961ce98edc8bf05 357 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 242 261 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 TF3313_0795 e6653f415c003dbaf961ce98edc8bf05 357 SUPERFAMILY SSF53659 4 353 1.13E-114 T 11-10-2018 TF3313_0795 e6653f415c003dbaf961ce98edc8bf05 357 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 347 4.0E-119 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 TF3313_0795 e6653f415c003dbaf961ce98edc8bf05 357 SMART SM01329 4 349 2.7E-175 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 TF3313_0795 e6653f415c003dbaf961ce98edc8bf05 357 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 353 44.962 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 TF3313_0795 e6653f415c003dbaf961ce98edc8bf05 357 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 346 5.8E-135 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 TF3313_0795 e6653f415c003dbaf961ce98edc8bf05 357 Gene3D G3DSA:3.40.718.10 1 357 1.4E-134 T 11-10-2018 TF3313_1039 e9e7ec2d3a6d107aba2e22adedddef86 462 PRINTS PR00045 Sigma-54 factor signature 362 374 7.7E-23 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TF3313_1039 e9e7ec2d3a6d107aba2e22adedddef86 462 PRINTS PR00045 Sigma-54 factor signature 436 454 7.7E-23 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TF3313_1039 e9e7ec2d3a6d107aba2e22adedddef86 462 PRINTS PR00045 Sigma-54 factor signature 378 389 7.7E-23 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TF3313_1039 e9e7ec2d3a6d107aba2e22adedddef86 462 PRINTS PR00045 Sigma-54 factor signature 160 177 7.7E-23 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TF3313_1039 e9e7ec2d3a6d107aba2e22adedddef86 462 PIRSF PIRSF000774 1 462 1.5E-138 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TF3313_1039 e9e7ec2d3a6d107aba2e22adedddef86 462 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 441 448 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TF3313_1039 e9e7ec2d3a6d107aba2e22adedddef86 462 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 1 460 2.1E-129 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TF3313_1039 e9e7ec2d3a6d107aba2e22adedddef86 462 Pfam PF04552 Sigma-54, DNA binding domain 302 460 2.1E-51 T 11-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding TF3313_1039 e9e7ec2d3a6d107aba2e22adedddef86 462 Gene3D G3DSA:1.10.10.1330 88 205 9.2E-26 T 11-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily TF3313_1039 e9e7ec2d3a6d107aba2e22adedddef86 462 Pfam PF04963 Sigma-54 factor, core binding domain 87 279 4.1E-55 T 11-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 TF3313_1039 e9e7ec2d3a6d107aba2e22adedddef86 462 Gene3D G3DSA:1.10.10.60 402 460 5.8E-21 T 11-10-2018 TF3313_2234 2ce26c51b10a372154501ac1445e41d3 1062 SUPERFAMILY SSF49464 29 111 4.32E-16 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_2234 2ce26c51b10a372154501ac1445e41d3 1062 Pfam PF07715 TonB-dependent Receptor Plug Domain 124 226 1.0E-12 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_2234 2ce26c51b10a372154501ac1445e41d3 1062 Pfam PF00593 TonB dependent receptor 411 1061 2.8E-27 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_2234 2ce26c51b10a372154501ac1445e41d3 1062 ProSitePatterns PS00018 EF-hand calcium-binding domain. 875 887 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site TF3313_2234 2ce26c51b10a372154501ac1445e41d3 1062 Gene3D G3DSA:2.60.40.1120 30 102 3.5E-7 T 11-10-2018 TF3313_2234 2ce26c51b10a372154501ac1445e41d3 1062 Pfam PF13715 CarboxypepD_reg-like domain 31 113 9.2E-16 T 11-10-2018 TF3313_2234 2ce26c51b10a372154501ac1445e41d3 1062 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 202 232 1.7E-16 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_2234 2ce26c51b10a372154501ac1445e41d3 1062 SUPERFAMILY SSF56935 109 1062 5.04E-67 T 11-10-2018 TF3313_2234 2ce26c51b10a372154501ac1445e41d3 1062 Gene3D G3DSA:2.170.130.10 103 230 1.7E-20 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_2234 2ce26c51b10a372154501ac1445e41d3 1062 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 29 1062 1.6E-281 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_2755 b46ac5f94f466a54c379f19e718a7128 412 Gene3D G3DSA:2.40.420.20 330 396 1.6E-48 T 11-10-2018 TF3313_2755 b46ac5f94f466a54c379f19e718a7128 412 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 111 396 7.2E-46 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TF3313_2755 b46ac5f94f466a54c379f19e718a7128 412 Gene3D G3DSA:2.40.50.100 113 250 1.6E-48 T 11-10-2018 TF3313_2755 b46ac5f94f466a54c379f19e718a7128 412 SUPERFAMILY SSF111369 129 326 1.29E-15 T 11-10-2018 TF3313_2755 b46ac5f94f466a54c379f19e718a7128 412 Gene3D G3DSA:2.40.30.170 251 329 1.6E-48 T 11-10-2018 TF3313_2755 b46ac5f94f466a54c379f19e718a7128 412 Pfam PF13437 HlyD family secretion protein 216 313 6.5E-9 T 11-10-2018 TF3313_2755 b46ac5f94f466a54c379f19e718a7128 412 Gene3D G3DSA:1.10.287.470 148 209 1.6E-48 T 11-10-2018 TF3313_0183 a7a46270e64befea22e93d71a1d45cb0 269 SMART SM01007 16 241 1.8E-30 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal TF3313_0183 a7a46270e64befea22e93d71a1d45cb0 269 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 17 241 9.7E-28 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal TF3313_0183 a7a46270e64befea22e93d71a1d45cb0 269 Gene3D G3DSA:3.40.225.10 11 258 9.6E-76 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily TF3313_0183 a7a46270e64befea22e93d71a1d45cb0 269 SUPERFAMILY SSF53639 12 266 1.1E-50 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily TF3313_0201 a8e1e03770c528f09bb428fb1ed17cca 480 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 393 470 1.1E-19 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 TF3313_0201 a8e1e03770c528f09bb428fb1ed17cca 480 SUPERFAMILY SSF74653 384 468 1.57E-20 T 11-10-2018 TF3313_0201 a8e1e03770c528f09bb428fb1ed17cca 480 Gene3D G3DSA:3.30.1150.10 331 472 2.5E-26 T 11-10-2018 TF3313_0201 a8e1e03770c528f09bb428fb1ed17cca 480 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 395 470 2.1E-12 T 11-10-2018 IPR006260 TonB/TolA, C-terminal TF3313_0201 a8e1e03770c528f09bb428fb1ed17cca 480 Pfam PF05569 BlaR1 peptidase M56 28 262 7.9E-17 T 11-10-2018 IPR008756 Peptidase M56 TF3313_2897 6500e32de5637eb0449a6392b644e41e 1081 SUPERFAMILY SSF52096 681 1065 3.81E-68 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TF3313_2897 6500e32de5637eb0449a6392b644e41e 1081 SUPERFAMILY SSF50156 763 852 1.72E-14 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 TF3313_2897 6500e32de5637eb0449a6392b644e41e 1081 Gene3D G3DSA:2.130.10.10 320 667 3.3E-63 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TF3313_2897 6500e32de5637eb0449a6392b644e41e 1081 Pfam PF14685 Tricorn protease PDZ domain 763 853 4.5E-26 T 11-10-2018 IPR029414 Tricorn protease, PDZ domain TF3313_2897 6500e32de5637eb0449a6392b644e41e 1081 PIRSF PIRSF036421 15 1072 8.9E-253 T 11-10-2018 IPR012393 Tricorn protease GO:0008236 TF3313_2897 6500e32de5637eb0449a6392b644e41e 1081 Gene3D G3DSA:2.30.42.10 762 859 7.4E-11 T 11-10-2018 TF3313_2897 6500e32de5637eb0449a6392b644e41e 1081 Gene3D G3DSA:2.120.10.60 13 298 4.6E-94 T 11-10-2018 TF3313_2897 6500e32de5637eb0449a6392b644e41e 1081 SUPERFAMILY SSF69304 33 296 1.29E-36 T 11-10-2018 TF3313_2897 6500e32de5637eb0449a6392b644e41e 1081 SUPERFAMILY SSF82171 268 637 8.24E-40 T 11-10-2018 TF3313_2897 6500e32de5637eb0449a6392b644e41e 1081 SMART SM00245 849 1039 6.1E-8 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 TF3313_2897 6500e32de5637eb0449a6392b644e41e 1081 Pfam PF14684 Tricorn protease C1 domain 684 751 1.9E-27 T 11-10-2018 IPR028204 Tricorn protease C1 domain TF3313_2897 6500e32de5637eb0449a6392b644e41e 1081 Gene3D G3DSA:3.90.226.10 861 1075 1.0E-62 T 11-10-2018 TF3313_2897 6500e32de5637eb0449a6392b644e41e 1081 Gene3D G3DSA:3.30.750.44 681 752 1.1E-27 T 11-10-2018 TF3313_2897 6500e32de5637eb0449a6392b644e41e 1081 Pfam PF03572 Peptidase family S41 882 1037 2.3E-21 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 TF3313_2897 6500e32de5637eb0449a6392b644e41e 1081 Pfam PF07676 WD40-like Beta Propeller Repeat 484 515 1.7E-4 T 11-10-2018 IPR011659 WD40-like Beta Propeller TF3313_2897 6500e32de5637eb0449a6392b644e41e 1081 Pfam PF07676 WD40-like Beta Propeller Repeat 448 471 0.021 T 11-10-2018 IPR011659 WD40-like Beta Propeller TF3313_2897 6500e32de5637eb0449a6392b644e41e 1081 Pfam PF07676 WD40-like Beta Propeller Repeat 349 384 1.9E-7 T 11-10-2018 IPR011659 WD40-like Beta Propeller TF3313_2897 6500e32de5637eb0449a6392b644e41e 1081 Pfam PF07676 WD40-like Beta Propeller Repeat 170 181 0.17 T 11-10-2018 IPR011659 WD40-like Beta Propeller TF3313_2897 6500e32de5637eb0449a6392b644e41e 1081 Pfam PF07676 WD40-like Beta Propeller Repeat 57 91 6.8E-9 T 11-10-2018 IPR011659 WD40-like Beta Propeller TF3313_0226 2445172a80e1193f4295b42d3d59beb1 336 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 3 326 8.7E-134 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_0226 2445172a80e1193f4295b42d3d59beb1 336 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 314 1.2E-67 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_0226 2445172a80e1193f4295b42d3d59beb1 336 PIRSF PIRSF000149 1 335 8.3E-131 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_0226 2445172a80e1193f4295b42d3d59beb1 336 SUPERFAMILY SSF55347 151 314 2.71E-75 T 11-10-2018 TF3313_0226 2445172a80e1193f4295b42d3d59beb1 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 9.4E-44 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_0226 2445172a80e1193f4295b42d3d59beb1 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 9.4E-44 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_0226 2445172a80e1193f4295b42d3d59beb1 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 9.4E-44 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_0226 2445172a80e1193f4295b42d3d59beb1 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 9.4E-44 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_0226 2445172a80e1193f4295b42d3d59beb1 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 9.4E-44 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_0226 2445172a80e1193f4295b42d3d59beb1 336 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_0226 2445172a80e1193f4295b42d3d59beb1 336 Gene3D G3DSA:3.30.360.10 151 316 9.2E-150 T 11-10-2018 TF3313_0226 2445172a80e1193f4295b42d3d59beb1 336 Gene3D G3DSA:3.40.50.720 3 328 9.2E-150 T 11-10-2018 TF3313_0226 2445172a80e1193f4295b42d3d59beb1 336 SMART SM00846 2 152 2.5E-90 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_0226 2445172a80e1193f4295b42d3d59beb1 336 SUPERFAMILY SSF51735 1 170 9.07E-67 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_0226 2445172a80e1193f4295b42d3d59beb1 336 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 103 3.8E-38 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_0927 73392d765df8a0b66141c08c4fbd712b 1031 Gene3D G3DSA:3.40.50.300 794 1026 3.2E-24 T 11-10-2018 TF3313_0927 73392d765df8a0b66141c08c4fbd712b 1031 Pfam PF13555 P-loop containing region of AAA domain 26 58 6.2E-7 T 11-10-2018 TF3313_0927 73392d765df8a0b66141c08c4fbd712b 1031 SUPERFAMILY SSF52540 1 1009 5.2E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0927 73392d765df8a0b66141c08c4fbd712b 1031 Gene3D G3DSA:3.40.50.300 1 251 1.2E-34 T 11-10-2018 TF3313_0927 73392d765df8a0b66141c08c4fbd712b 1031 SUPERFAMILY SSF52540 1 300 1.25E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0927 73392d765df8a0b66141c08c4fbd712b 1031 Pfam PF13558 Putative exonuclease SbcCD, C subunit 928 984 6.9E-11 T 11-10-2018 TF3313_2399 a45c9abd0d4e233cca258b6aef6a34bd 715 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 586 710 6.2E-61 T 11-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 TF3313_2399 a45c9abd0d4e233cca258b6aef6a34bd 715 SUPERFAMILY SSF52242 553 713 7.72E-58 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 TF3313_2399 a45c9abd0d4e233cca258b6aef6a34bd 715 Pfam PF02310 B12 binding domain 589 703 5.6E-14 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 TF3313_2399 a45c9abd0d4e233cca258b6aef6a34bd 715 Pfam PF01642 Methylmalonyl-CoA mutase 34 547 2.8E-228 T 11-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 TF3313_2399 a45c9abd0d4e233cca258b6aef6a34bd 715 SUPERFAMILY SSF51703 29 549 2.88E-212 T 11-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 TF3313_2399 a45c9abd0d4e233cca258b6aef6a34bd 715 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 376 401 - T 11-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 TF3313_2399 a45c9abd0d4e233cca258b6aef6a34bd 715 Gene3D G3DSA:3.20.20.240 33 549 4.3E-233 T 11-10-2018 TF3313_2399 a45c9abd0d4e233cca258b6aef6a34bd 715 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 33 553 4.6E-260 T 11-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 TF3313_2399 a45c9abd0d4e233cca258b6aef6a34bd 715 Gene3D G3DSA:3.40.50.280 553 713 1.4E-54 T 11-10-2018 TF3313_0351 60e9c960f616104a76c34f1cab57d61c 677 SUPERFAMILY SSF52922 547 676 7.28E-29 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TF3313_0351 60e9c960f616104a76c34f1cab57d61c 677 SUPERFAMILY SSF52518 345 533 2.36E-54 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold TF3313_0351 60e9c960f616104a76c34f1cab57d61c 677 SUPERFAMILY SSF52518 2 320 3.84E-76 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold TF3313_0351 60e9c960f616104a76c34f1cab57d61c 677 ProSitePatterns PS00801 Transketolase signature 1. 15 35 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TF3313_0351 60e9c960f616104a76c34f1cab57d61c 677 SMART SM00861 353 535 1.9E-57 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TF3313_0351 60e9c960f616104a76c34f1cab57d61c 677 Gene3D G3DSA:3.40.50.970 332 541 6.3E-63 T 11-10-2018 TF3313_0351 60e9c960f616104a76c34f1cab57d61c 677 Gene3D G3DSA:3.40.50.970 2 331 1.4E-84 T 11-10-2018 TF3313_0351 60e9c960f616104a76c34f1cab57d61c 677 ProSitePatterns PS00802 Transketolase signature 2. 468 484 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TF3313_0351 60e9c960f616104a76c34f1cab57d61c 677 Gene3D G3DSA:3.40.50.920 551 677 1.4E-28 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TF3313_0351 60e9c960f616104a76c34f1cab57d61c 677 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 8 340 1.9E-86 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TF3313_0351 60e9c960f616104a76c34f1cab57d61c 677 Pfam PF02779 Transketolase, pyrimidine binding domain 352 530 3.2E-36 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TF3313_0006 3300a3c7be514686026ca4b99c923bef 245 SMART SM00563 75 189 7.3E-36 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TF3313_0006 3300a3c7be514686026ca4b99c923bef 245 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 61 186 6.8E-32 T 11-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 TF3313_0006 3300a3c7be514686026ca4b99c923bef 245 SUPERFAMILY SSF69593 40 240 7.85E-44 T 11-10-2018 TF3313_0006 3300a3c7be514686026ca4b99c923bef 245 Pfam PF01553 Acyltransferase 61 185 5.1E-28 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TF3313_1551 ff240dc7a0e5d1d6c0c8f2b50ce95bb0 728 SMART SM00382 514 700 2.5E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_1551 ff240dc7a0e5d1d6c0c8f2b50ce95bb0 728 ProSitePatterns PS00211 ABC transporters family signature. 626 640 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TF3313_1551 ff240dc7a0e5d1d6c0c8f2b50ce95bb0 728 Gene3D G3DSA:1.20.1560.10 156 473 2.2E-54 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TF3313_1551 ff240dc7a0e5d1d6c0c8f2b50ce95bb0 728 Gene3D G3DSA:3.40.50.300 477 727 6.3E-83 T 11-10-2018 TF3313_1551 ff240dc7a0e5d1d6c0c8f2b50ce95bb0 728 Pfam PF03412 Peptidase C39 family 6 125 6.7E-33 T 11-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 TF3313_1551 ff240dc7a0e5d1d6c0c8f2b50ce95bb0 728 Pfam PF00664 ABC transporter transmembrane region 172 441 2.1E-29 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TF3313_1551 ff240dc7a0e5d1d6c0c8f2b50ce95bb0 728 Pfam PF00005 ABC transporter 505 654 6.7E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TF3313_1551 ff240dc7a0e5d1d6c0c8f2b50ce95bb0 728 Gene3D G3DSA:3.90.70.10 1 149 1.0E-41 T 11-10-2018 TF3313_1551 ff240dc7a0e5d1d6c0c8f2b50ce95bb0 728 SUPERFAMILY SSF90123 154 469 9.29E-54 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TF3313_1551 ff240dc7a0e5d1d6c0c8f2b50ce95bb0 728 SUPERFAMILY SSF52540 482 725 3.45E-83 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2553 a0bc51c6697d8b46550bc98413bb5549 424 SMART SM00116 271 319 1.2 T 11-10-2018 IPR000644 CBS domain TF3313_2553 a0bc51c6697d8b46550bc98413bb5549 424 SMART SM00116 209 258 1.6 T 11-10-2018 IPR000644 CBS domain TF3313_2553 a0bc51c6697d8b46550bc98413bb5549 424 Pfam PF00571 CBS domain 209 257 3.3E-5 T 11-10-2018 IPR000644 CBS domain TF3313_2553 a0bc51c6697d8b46550bc98413bb5549 424 Pfam PF00571 CBS domain 271 319 6.7E-5 T 11-10-2018 IPR000644 CBS domain TF3313_2553 a0bc51c6697d8b46550bc98413bb5549 424 Gene3D G3DSA:3.10.580.10 180 327 1.2E-55 T 11-10-2018 TF3313_2553 a0bc51c6697d8b46550bc98413bb5549 424 SMART SM01091 334 417 9.9E-20 T 11-10-2018 IPR005170 Transporter-associated domain TF3313_2553 a0bc51c6697d8b46550bc98413bb5549 424 SUPERFAMILY SSF56176 332 414 7.09E-19 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TF3313_2553 a0bc51c6697d8b46550bc98413bb5549 424 Pfam PF01595 Domain of unknown function DUF21 20 157 6.1E-18 T 11-10-2018 IPR002550 CNNM, transmembrane domain TF3313_2553 a0bc51c6697d8b46550bc98413bb5549 424 Pfam PF03471 Transporter associated domain 335 416 1.1E-16 T 11-10-2018 IPR005170 Transporter-associated domain TF3313_2553 a0bc51c6697d8b46550bc98413bb5549 424 Gene3D G3DSA:3.30.465.10 328 414 6.8E-21 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TF3313_2553 a0bc51c6697d8b46550bc98413bb5549 424 SUPERFAMILY SSF54631 196 338 5.86E-32 T 11-10-2018 TF3313_2206 aa3c867bbb8887be80ea5b4506c4537c 254 Pfam PF00929 Exonuclease 10 165 1.2E-19 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III TF3313_2206 aa3c867bbb8887be80ea5b4506c4537c 254 SUPERFAMILY SSF53098 6 177 8.73E-51 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TF3313_2206 aa3c867bbb8887be80ea5b4506c4537c 254 Gene3D G3DSA:3.30.420.10 4 172 1.4E-38 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TF3313_2206 aa3c867bbb8887be80ea5b4506c4537c 254 SMART SM00479 8 174 5.9E-26 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III TF3313_2296 615289be182c336efcd5a6f9e5c8d57d 479 Pfam PF01841 Transglutaminase-like superfamily 298 402 9.1E-21 T 11-10-2018 IPR002931 Transglutaminase-like TF3313_2296 615289be182c336efcd5a6f9e5c8d57d 479 SUPERFAMILY SSF54001 287 435 1.57E-28 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TF3313_2296 615289be182c336efcd5a6f9e5c8d57d 479 SMART SM00460 344 405 2.0E-15 T 11-10-2018 IPR002931 Transglutaminase-like TF3313_2296 615289be182c336efcd5a6f9e5c8d57d 479 Gene3D G3DSA:3.10.620.30 263 419 2.5E-21 T 11-10-2018 TF3313_0122 c1ea883bd2eadd29e3aff04fae3066ff 224 SMART SM00382 30 224 2.7E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_0122 c1ea883bd2eadd29e3aff04fae3066ff 224 Gene3D G3DSA:3.40.50.300 1 223 1.3E-67 T 11-10-2018 TF3313_0122 c1ea883bd2eadd29e3aff04fae3066ff 224 SUPERFAMILY SSF52540 1 221 1.35E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0122 c1ea883bd2eadd29e3aff04fae3066ff 224 Pfam PF00005 ABC transporter 21 169 1.1E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TF3313_0122 c1ea883bd2eadd29e3aff04fae3066ff 224 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TF3313_2410 cd846c611967692529ed890357c90d8f 301 Gene3D G3DSA:3.30.70.20 212 289 6.4E-13 T 11-10-2018 TF3313_2410 cd846c611967692529ed890357c90d8f 301 Pfam PF00037 4Fe-4S binding domain 164 186 6.2E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TF3313_2410 cd846c611967692529ed890357c90d8f 301 Gene3D G3DSA:3.20.20.20 33 98 3.7E-7 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TF3313_2410 cd846c611967692529ed890357c90d8f 301 Gene3D G3DSA:3.30.70.20 132 191 5.3E-13 T 11-10-2018 TF3313_2410 cd846c611967692529ed890357c90d8f 301 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 247 258 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TF3313_2410 cd846c611967692529ed890357c90d8f 301 SUPERFAMILY SSF54862 215 273 2.01E-16 T 11-10-2018 TF3313_2410 cd846c611967692529ed890357c90d8f 301 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 170 181 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TF3313_2410 cd846c611967692529ed890357c90d8f 301 Pfam PF04060 Putative Fe-S cluster 41 63 1.0E-6 T 11-10-2018 IPR007202 4Fe-4S domain GO:0051536 TF3313_2410 cd846c611967692529ed890357c90d8f 301 Pfam PF12838 4Fe-4S dicluster domain 217 261 4.3E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TF3313_2410 cd846c611967692529ed890357c90d8f 301 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 1 192 27.078 T 11-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 TF3313_2410 cd846c611967692529ed890357c90d8f 301 SUPERFAMILY SSF54862 139 191 1.12E-12 T 11-10-2018 TF3313_2125 e4dc7ad830c2e03bb0675a517bcabef6 292 SUPERFAMILY SSF56317 1 285 3.92E-82 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TF3313_2125 e4dc7ad830c2e03bb0675a517bcabef6 292 Gene3D G3DSA:3.60.110.10 1 291 4.9E-91 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TF3313_2125 e4dc7ad830c2e03bb0675a517bcabef6 292 Pfam PF00795 Carbon-nitrogen hydrolase 3 269 4.3E-55 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 TF3313_1344 8c8081e5d3f8ac477efe5d7a750f5538 211 SUPERFAMILY SSF53335 15 197 1.84E-13 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_1344 8c8081e5d3f8ac477efe5d7a750f5538 211 Gene3D G3DSA:3.40.50.150 11 201 7.2E-13 T 11-10-2018 TF3313_1344 8c8081e5d3f8ac477efe5d7a750f5538 211 Pfam PF08241 Methyltransferase domain 76 125 9.3E-5 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 TF3313_0836 f236d64600b39c4d3f9301a99349fe44 227 SMART SM00862 149 223 2.7E-12 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TF3313_0836 f236d64600b39c4d3f9301a99349fe44 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 223 6.2E-16 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TF3313_0836 f236d64600b39c4d3f9301a99349fe44 227 Pfam PF00072 Response regulator receiver domain 7 117 1.3E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TF3313_0836 f236d64600b39c4d3f9301a99349fe44 227 SUPERFAMILY SSF52172 5 188 1.71E-39 T 11-10-2018 IPR011006 CheY-like superfamily TF3313_0836 f236d64600b39c4d3f9301a99349fe44 227 Gene3D G3DSA:1.10.10.10 131 226 7.7E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_0836 f236d64600b39c4d3f9301a99349fe44 227 SMART SM00448 5 116 5.0E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TF3313_0836 f236d64600b39c4d3f9301a99349fe44 227 Gene3D G3DSA:3.40.50.2300 2 130 5.7E-37 T 11-10-2018 TF3313_2046 d042fe61c7fa180ae54dd88afd083983 767 SUPERFAMILY SSF56935 169 742 3.3E-10 T 11-10-2018 TF3313_2046 d042fe61c7fa180ae54dd88afd083983 767 SUPERFAMILY SSF49464 27 127 1.02E-10 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_2046 d042fe61c7fa180ae54dd88afd083983 767 Pfam PF13715 CarboxypepD_reg-like domain 28 117 1.0E-8 T 11-10-2018 TF3313_1402 796911bda46d0ecd507625069e959baf 699 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 675 2.1E-174 T 11-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 TF3313_1402 796911bda46d0ecd507625069e959baf 699 SUPERFAMILY SSF56712 1 588 1.57E-174 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain TF3313_1402 796911bda46d0ecd507625069e959baf 699 Pfam PF01751 Toprim domain 3 132 4.3E-12 T 11-10-2018 IPR006171 TOPRIM domain TF3313_1402 796911bda46d0ecd507625069e959baf 699 Gene3D G3DSA:1.10.460.10 159 584 8.5E-153 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 TF3313_1402 796911bda46d0ecd507625069e959baf 699 Gene3D G3DSA:2.70.20.10 211 470 8.5E-153 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 TF3313_1402 796911bda46d0ecd507625069e959baf 699 SMART SM00436 124 217 1.3E-39 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 TF3313_1402 796911bda46d0ecd507625069e959baf 699 Gene3D G3DSA:1.10.290.10 267 392 8.5E-153 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 TF3313_1402 796911bda46d0ecd507625069e959baf 699 Pfam PF01131 DNA topoisomerase 151 575 2.4E-118 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TF3313_1402 796911bda46d0ecd507625069e959baf 699 Gene3D G3DSA:3.40.50.140 1 152 3.7E-52 T 11-10-2018 TF3313_1402 796911bda46d0ecd507625069e959baf 699 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 187 205 1.6E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TF3313_1402 796911bda46d0ecd507625069e959baf 699 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 502 516 1.6E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TF3313_1402 796911bda46d0ecd507625069e959baf 699 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 300 309 1.6E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TF3313_1402 796911bda46d0ecd507625069e959baf 699 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 1.6E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TF3313_1402 796911bda46d0ecd507625069e959baf 699 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 378 394 1.6E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TF3313_1402 796911bda46d0ecd507625069e959baf 699 SMART SM00493 1 124 8.2E-15 T 11-10-2018 IPR006171 TOPRIM domain TF3313_1402 796911bda46d0ecd507625069e959baf 699 SMART SM00437 258 539 2.4E-75 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 TF3313_1023 b7769afdc8e9cbff886b20966f592092 336 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 164 180 8.4E-71 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TF3313_1023 b7769afdc8e9cbff886b20966f592092 336 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 99 115 8.4E-71 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TF3313_1023 b7769afdc8e9cbff886b20966f592092 336 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 250 272 8.4E-71 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TF3313_1023 b7769afdc8e9cbff886b20966f592092 336 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 5 24 8.4E-71 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TF3313_1023 b7769afdc8e9cbff886b20966f592092 336 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 8.4E-71 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TF3313_1023 b7769afdc8e9cbff886b20966f592092 336 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 218 230 8.4E-71 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TF3313_1023 b7769afdc8e9cbff886b20966f592092 336 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 144 162 8.4E-71 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TF3313_1023 b7769afdc8e9cbff886b20966f592092 336 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 182 199 8.4E-71 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TF3313_1023 b7769afdc8e9cbff886b20966f592092 336 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 126 143 8.4E-71 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TF3313_1023 b7769afdc8e9cbff886b20966f592092 336 Pfam PF00365 Phosphofructokinase 2 285 2.9E-103 T 11-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TF3313_1023 b7769afdc8e9cbff886b20966f592092 336 Gene3D G3DSA:3.40.50.450 3 310 2.3E-109 T 11-10-2018 TF3313_1023 b7769afdc8e9cbff886b20966f592092 336 SUPERFAMILY SSF53784 1 324 6.93E-117 T 11-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TF3313_1023 b7769afdc8e9cbff886b20966f592092 336 Gene3D G3DSA:3.40.50.460 146 266 2.3E-109 T 11-10-2018 TF3313_1023 b7769afdc8e9cbff886b20966f592092 336 PIRSF PIRSF000532 1 336 1.1E-124 T 11-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 TF3313_1023 b7769afdc8e9cbff886b20966f592092 336 Hamap MF_01976 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 1 335 40.849 T 11-10-2018 IPR012829 Phosphofructokinase, mixed-substrate PFK group III GO:0006096|GO:0047334 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 TF3313_2067 2aebc8f721dff01eff89fc79460333de 247 SMART SM00382 30 219 4.0E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_2067 2aebc8f721dff01eff89fc79460333de 247 SUPERFAMILY SSF52540 5 228 1.1E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2067 2aebc8f721dff01eff89fc79460333de 247 Gene3D G3DSA:3.40.50.300 1 244 1.3E-61 T 11-10-2018 TF3313_2067 2aebc8f721dff01eff89fc79460333de 247 Pfam PF00005 ABC transporter 22 164 2.3E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TF3313_0725 2bb06c659f0087718f551ad3557cd127 531 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 154 182 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 TF3313_0725 2bb06c659f0087718f551ad3557cd127 531 Pfam PF01464 Transglycosylase SLT domain 142 243 1.6E-25 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 TF3313_0725 2bb06c659f0087718f551ad3557cd127 531 Gene3D G3DSA:1.10.530.10 130 285 9.5E-35 T 11-10-2018 TF3313_0725 2bb06c659f0087718f551ad3557cd127 531 Gene3D G3DSA:3.10.350.10 463 531 1.1E-16 T 11-10-2018 IPR036779 LysM domain superfamily TF3313_0725 2bb06c659f0087718f551ad3557cd127 531 Pfam PF01476 LysM domain 486 529 5.5E-14 T 11-10-2018 IPR018392 LysM domain TF3313_0725 2bb06c659f0087718f551ad3557cd127 531 Pfam PF01476 LysM domain 389 430 1.1E-9 T 11-10-2018 IPR018392 LysM domain TF3313_0725 2bb06c659f0087718f551ad3557cd127 531 Gene3D G3DSA:3.10.350.10 385 435 4.3E-13 T 11-10-2018 IPR036779 LysM domain superfamily TF3313_0725 2bb06c659f0087718f551ad3557cd127 531 SUPERFAMILY SSF54106 387 431 1.05E-9 T 11-10-2018 TF3313_0725 2bb06c659f0087718f551ad3557cd127 531 SUPERFAMILY SSF54106 484 530 1.83E-10 T 11-10-2018 TF3313_0725 2bb06c659f0087718f551ad3557cd127 531 SUPERFAMILY SSF53955 134 285 2.12E-40 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily TF3313_0725 2bb06c659f0087718f551ad3557cd127 531 SMART SM00257 485 529 1.2E-12 T 11-10-2018 IPR018392 LysM domain TF3313_0725 2bb06c659f0087718f551ad3557cd127 531 SMART SM00257 388 431 4.1E-10 T 11-10-2018 IPR018392 LysM domain TF3313_1050 0d09c53326bb3a1799c55b61daff1cc7 489 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 98 226 4.4E-48 T 11-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TF3313_1050 0d09c53326bb3a1799c55b61daff1cc7 489 SUPERFAMILY SSF51735 243 488 6.68E-67 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_1050 0d09c53326bb3a1799c55b61daff1cc7 489 Gene3D G3DSA:3.40.50.10860 96 231 4.9E-168 T 11-10-2018 TF3313_1050 0d09c53326bb3a1799c55b61daff1cc7 489 SUPERFAMILY SSF53223 51 237 2.85E-67 T 11-10-2018 TF3313_1050 0d09c53326bb3a1799c55b61daff1cc7 489 PIRSF PIRSF000185 63 489 6.5E-112 T 11-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 TF3313_1050 0d09c53326bb3a1799c55b61daff1cc7 489 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 155 169 5.9E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TF3313_1050 0d09c53326bb3a1799c55b61daff1cc7 489 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 234 256 5.9E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TF3313_1050 0d09c53326bb3a1799c55b61daff1cc7 489 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 414 425 5.9E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TF3313_1050 0d09c53326bb3a1799c55b61daff1cc7 489 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 276 296 5.9E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TF3313_1050 0d09c53326bb3a1799c55b61daff1cc7 489 Gene3D G3DSA:1.10.285.10 426 489 1.4E-11 T 11-10-2018 TF3313_1050 0d09c53326bb3a1799c55b61daff1cc7 489 Gene3D G3DSA:1.10.285.10 49 425 4.9E-168 T 11-10-2018 TF3313_1050 0d09c53326bb3a1799c55b61daff1cc7 489 Gene3D G3DSA:3.40.50.720 250 415 4.9E-168 T 11-10-2018 TF3313_1050 0d09c53326bb3a1799c55b61daff1cc7 489 SMART SM00839 245 487 1.6E-72 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TF3313_1050 0d09c53326bb3a1799c55b61daff1cc7 489 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 243 487 2.8E-76 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TF3313_1718 b17807e0cfb36355a7fcc66af2742eaf 820 SUPERFAMILY SSF55681 480 713 1.19E-33 T 11-10-2018 TF3313_1718 b17807e0cfb36355a7fcc66af2742eaf 820 Gene3D G3DSA:3.30.56.10 4 188 1.6E-69 T 11-10-2018 TF3313_1718 b17807e0cfb36355a7fcc66af2742eaf 820 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 820 5.4E-261 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 TF3313_1718 b17807e0cfb36355a7fcc66af2742eaf 820 SUPERFAMILY SSF50249 42 195 4.0E-42 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TF3313_1718 b17807e0cfb36355a7fcc66af2742eaf 820 Pfam PF03147 Ferredoxin-fold anticodon binding domain 727 820 8.6E-28 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 TF3313_1718 b17807e0cfb36355a7fcc66af2742eaf 820 SMART SM00873 225 398 8.3E-88 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 TF3313_1718 b17807e0cfb36355a7fcc66af2742eaf 820 Gene3D G3DSA:3.50.40.10 205 413 5.7E-80 T 11-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 TF3313_1718 b17807e0cfb36355a7fcc66af2742eaf 820 Pfam PF03484 tRNA synthetase B5 domain 418 484 7.5E-16 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 TF3313_1718 b17807e0cfb36355a7fcc66af2742eaf 820 Gene3D G3DSA:3.30.70.380 728 820 3.6E-28 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 TF3313_1718 b17807e0cfb36355a7fcc66af2742eaf 820 Pfam PF01588 Putative tRNA binding domain 48 151 4.1E-22 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 TF3313_1718 b17807e0cfb36355a7fcc66af2742eaf 820 SUPERFAMILY SSF46955 415 487 8.24E-14 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily TF3313_1718 b17807e0cfb36355a7fcc66af2742eaf 820 Gene3D G3DSA:3.30.56.10 414 487 2.3E-18 T 11-10-2018 TF3313_1718 b17807e0cfb36355a7fcc66af2742eaf 820 Pfam PF03483 B3/4 domain 225 398 7.9E-65 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 TF3313_1718 b17807e0cfb36355a7fcc66af2742eaf 820 SMART SM00896 727 820 3.1E-38 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 TF3313_1718 b17807e0cfb36355a7fcc66af2742eaf 820 SUPERFAMILY SSF54991 722 820 6.54E-28 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 TF3313_1718 b17807e0cfb36355a7fcc66af2742eaf 820 SUPERFAMILY SSF56037 215 409 1.54E-68 T 11-10-2018 TF3313_1718 b17807e0cfb36355a7fcc66af2742eaf 820 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 814 41.744 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 TF3313_1718 b17807e0cfb36355a7fcc66af2742eaf 820 Gene3D G3DSA:3.30.930.10 502 712 1.4E-50 T 11-10-2018 TF3313_1718 b17807e0cfb36355a7fcc66af2742eaf 820 Gene3D G3DSA:2.40.50.140 42 161 1.6E-69 T 11-10-2018 TF3313_1718 b17807e0cfb36355a7fcc66af2742eaf 820 SMART SM00874 415 484 2.6E-18 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 TF3313_1304 f6ea74fdf1e7f016fbd148c22b99e75c 767 SUPERFAMILY SSF49464 6 86 1.08E-7 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_1304 f6ea74fdf1e7f016fbd148c22b99e75c 767 Pfam PF14905 Outer membrane protein beta-barrel family 345 743 6.1E-85 T 11-10-2018 TF3313_1304 f6ea74fdf1e7f016fbd148c22b99e75c 767 Pfam PF13715 CarboxypepD_reg-like domain 17 79 2.2E-9 T 11-10-2018 TF3313_1304 f6ea74fdf1e7f016fbd148c22b99e75c 767 SUPERFAMILY SSF56935 76 744 9.16E-47 T 11-10-2018 TF3313_1304 f6ea74fdf1e7f016fbd148c22b99e75c 767 Gene3D G3DSA:2.40.170.20 256 707 9.6E-17 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_0015 e293660621d6ccd90943488a0c2369b0 381 SUPERFAMILY SSF53807 94 340 3.81E-37 T 11-10-2018 TF3313_0015 e293660621d6ccd90943488a0c2369b0 381 Pfam PF01497 Periplasmic binding protein 102 338 4.1E-15 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain TF3313_0015 e293660621d6ccd90943488a0c2369b0 381 Gene3D G3DSA:3.40.50.1980 92 380 1.3E-24 T 11-10-2018 TF3313_2768 a15fca22844531010e5fa01916b7c089 401 Gene3D G3DSA:3.30.70.2130 78 227 3.3E-129 T 11-10-2018 TF3313_2768 a15fca22844531010e5fa01916b7c089 401 TIGRFAM TIGR00306 apgM: phosphoglycerate mutase (2,3-diphosphoglycerate-independent), archaeal form 5 400 1.7E-119 T 11-10-2018 IPR004456 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GO:0003824|GO:0046537 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TF3313_2768 a15fca22844531010e5fa01916b7c089 401 Gene3D G3DSA:3.40.720.10 4 396 3.3E-129 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 TF3313_2768 a15fca22844531010e5fa01916b7c089 401 TIGRFAM TIGR02535 hyp_Hser_kinase: proposed homoserine kinase 1 401 1.9E-159 T 11-10-2018 IPR023665 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, prokaryotes GO:0046537 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TF3313_2768 a15fca22844531010e5fa01916b7c089 401 SUPERFAMILY SSF53649 1 376 2.27E-33 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 TF3313_2768 a15fca22844531010e5fa01916b7c089 401 Pfam PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 37 205 3.0E-57 T 11-10-2018 IPR004456 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GO:0003824|GO:0046537 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TF3313_2768 a15fca22844531010e5fa01916b7c089 401 Pfam PF01676 Metalloenzyme superfamily 1 385 2.6E-39 T 11-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 TF3313_2768 a15fca22844531010e5fa01916b7c089 401 PIRSF PIRSF006392 1 401 5.8E-137 T 11-10-2018 IPR004456 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GO:0003824|GO:0046537 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TF3313_2167 4f309aa772b6aa6bb4ed87ac07d6b085 338 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 6 333 7.9E-93 T 11-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 TF3313_2167 4f309aa772b6aa6bb4ed87ac07d6b085 338 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 2 323 26.097 T 11-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 TF3313_2167 4f309aa772b6aa6bb4ed87ac07d6b085 338 TIGRFAM TIGR03641 cas1_HMARI: CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP 3 338 4.1E-141 T 11-10-2018 IPR019858 CRISPR-associated protein Cas1, HMARI/TNEAP subtype GO:0004520|GO:0043571|GO:0046872 TF3313_2167 4f309aa772b6aa6bb4ed87ac07d6b085 338 Pfam PF01867 CRISPR associated protein Cas1 5 293 1.4E-93 T 11-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 TF3313_2167 4f309aa772b6aa6bb4ed87ac07d6b085 338 Gene3D G3DSA:3.100.10.20 2 90 4.4E-30 T 11-10-2018 TF3313_2167 4f309aa772b6aa6bb4ed87ac07d6b085 338 Gene3D G3DSA:1.20.120.920 92 337 2.0E-74 T 11-10-2018 TF3313_0738 1ff4802056029a2998243d0e74426189 468 SUPERFAMILY SSF51735 49 212 2.41E-28 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_0738 1ff4802056029a2998243d0e74426189 468 Gene3D G3DSA:3.30.360.10 182 459 1.6E-163 T 11-10-2018 TF3313_0738 1ff4802056029a2998243d0e74426189 468 SUPERFAMILY SSF55347 190 418 5.56E-7 T 11-10-2018 TF3313_0738 1ff4802056029a2998243d0e74426189 468 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 30 1.5E-5 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal TF3313_0738 1ff4802056029a2998243d0e74426189 468 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 53 177 2.4E-10 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 TF3313_0738 1ff4802056029a2998243d0e74426189 468 Gene3D G3DSA:3.40.50.720 54 440 1.6E-163 T 11-10-2018 TF3313_2593 15efa85bb5967017d3fa68bb6084a1df 315 SUPERFAMILY SSF56104 7 292 1.93E-90 T 11-10-2018 TF3313_2593 15efa85bb5967017d3fa68bb6084a1df 315 ProSitePatterns PS01058 SAICAR synthetase signature 2. 196 204 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TF3313_2593 15efa85bb5967017d3fa68bb6084a1df 315 Gene3D G3DSA:3.30.470.20 95 240 4.4E-52 T 11-10-2018 TF3313_2593 15efa85bb5967017d3fa68bb6084a1df 315 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 14 289 22.765 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TF3313_2593 15efa85bb5967017d3fa68bb6084a1df 315 Pfam PF01259 SAICAR synthetase 17 261 1.9E-83 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TF3313_2593 15efa85bb5967017d3fa68bb6084a1df 315 Gene3D G3DSA:3.30.200.20 4 94 5.4E-25 T 11-10-2018 TF3313_2085 aa6ea567bf749a4a8d25f2da0a6e0d37 367 Gene3D G3DSA:3.30.70.100 249 345 4.9E-19 T 11-10-2018 TF3313_2085 aa6ea567bf749a4a8d25f2da0a6e0d37 367 SUPERFAMILY SSF82861 91 182 1.05E-11 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 TF3313_2085 aa6ea567bf749a4a8d25f2da0a6e0d37 367 Pfam PF00924 Mechanosensitive ion channel 143 341 6.5E-53 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 TF3313_2085 aa6ea567bf749a4a8d25f2da0a6e0d37 367 Gene3D G3DSA:2.30.30.60 200 247 7.3E-14 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily TF3313_2085 aa6ea567bf749a4a8d25f2da0a6e0d37 367 SUPERFAMILY SSF82689 251 352 3.14E-19 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 TF3313_2085 aa6ea567bf749a4a8d25f2da0a6e0d37 367 SUPERFAMILY SSF50182 183 249 1.28E-17 T 11-10-2018 IPR010920 LSM domain superfamily TF3313_2085 aa6ea567bf749a4a8d25f2da0a6e0d37 367 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 213 247 - T 11-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 TF3313_1003 06da8ddc56d643c7d2d972d65ac05b99 326 Gene3D G3DSA:3.90.25.10 179 311 4.9E-87 T 11-10-2018 TF3313_1003 06da8ddc56d643c7d2d972d65ac05b99 326 SUPERFAMILY SSF51735 2 318 5.1E-91 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_1003 06da8ddc56d643c7d2d972d65ac05b99 326 TIGRFAM TIGR04180 EDH_00030: NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family 5 298 2.5E-150 T 11-10-2018 IPR026390 NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family TF3313_1003 06da8ddc56d643c7d2d972d65ac05b99 326 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 306 2.0E-66 T 11-10-2018 IPR016040 NAD(P)-binding domain TF3313_1003 06da8ddc56d643c7d2d972d65ac05b99 326 Gene3D G3DSA:3.40.50.720 6 300 4.9E-87 T 11-10-2018 TF3313_1120 4024c49491d9ed3e08e7fb7550c6e714 513 Pfam PF14322 Starch-binding associating with outer membrane 89 231 4.8E-21 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_1120 4024c49491d9ed3e08e7fb7550c6e714 513 Pfam PF07980 SusD family 270 513 1.8E-39 T 11-10-2018 IPR012944 RagB/SusD domain TF3313_1120 4024c49491d9ed3e08e7fb7550c6e714 513 Gene3D G3DSA:1.25.40.390 44 513 2.6E-105 T 11-10-2018 TF3313_1120 4024c49491d9ed3e08e7fb7550c6e714 513 SUPERFAMILY SSF48452 22 513 1.52E-105 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1965 13d218a31068a238636b86d9a42eaa3b 448 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 5 253 2.9E-88 T 11-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 TF3313_1965 13d218a31068a238636b86d9a42eaa3b 448 Gene3D G3DSA:2.40.50.100 32 91 3.3E-5 T 11-10-2018 TF3313_1965 13d218a31068a238636b86d9a42eaa3b 448 SUPERFAMILY SSF51230 26 90 4.45E-5 T 11-10-2018 IPR011053 Single hybrid motif TF3313_1965 13d218a31068a238636b86d9a42eaa3b 448 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 4 447 42.972 T 11-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 TF3313_1965 13d218a31068a238636b86d9a42eaa3b 448 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 5 447 8.3E-165 T 11-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 TF3313_1965 13d218a31068a238636b86d9a42eaa3b 448 Pfam PF11973 NQRA C-terminal domain 261 310 2.0E-17 T 11-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 TF3313_0020 d2cf2f703e1ddb4c1d1091cd3e91ce0a 262 SUPERFAMILY SSF63380 9 104 2.51E-20 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel TF3313_0020 d2cf2f703e1ddb4c1d1091cd3e91ce0a 262 Gene3D G3DSA:2.40.30.10 5 102 3.8E-25 T 11-10-2018 TF3313_0020 d2cf2f703e1ddb4c1d1091cd3e91ce0a 262 SUPERFAMILY SSF52343 99 258 1.22E-31 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TF3313_0020 d2cf2f703e1ddb4c1d1091cd3e91ce0a 262 Gene3D G3DSA:2.10.240.10 222 259 1.3E-10 T 11-10-2018 IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily TF3313_0020 d2cf2f703e1ddb4c1d1091cd3e91ce0a 262 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 222 258 2.4E-12 T 11-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain TF3313_0020 d2cf2f703e1ddb4c1d1091cd3e91ce0a 262 Gene3D G3DSA:3.40.50.80 108 215 1.2E-24 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TF3313_0020 d2cf2f703e1ddb4c1d1091cd3e91ce0a 262 PIRSF PIRSF006816 5 262 9.1E-66 T 11-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 TF3313_0020 d2cf2f703e1ddb4c1d1091cd3e91ce0a 262 Pfam PF00175 Oxidoreductase NAD-binding domain 117 207 1.4E-6 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 TF3313_1404 532b046752aa1b6e9bc7c077ca2f53c9 164 SUPERFAMILY SSF53927 25 162 1.42E-34 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 TF3313_1404 532b046752aa1b6e9bc7c077ca2f53c9 164 Gene3D G3DSA:3.40.140.10 18 163 5.2E-40 T 11-10-2018 TF3313_1404 532b046752aa1b6e9bc7c077ca2f53c9 164 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 30 161 9.7E-34 T 11-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 TF3313_1404 532b046752aa1b6e9bc7c077ca2f53c9 164 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 27 126 9.6E-15 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain TF3313_1404 532b046752aa1b6e9bc7c077ca2f53c9 164 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 77 122 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 TF3313_2197 e99ec3a840eec8bd3998f3d5e24f35a4 442 Pfam PF13638 PIN domain 7 146 1.4E-36 T 11-10-2018 IPR002716 PIN domain TF3313_2197 e99ec3a840eec8bd3998f3d5e24f35a4 442 Gene3D G3DSA:3.40.50.300 228 440 9.0E-68 T 11-10-2018 TF3313_2197 e99ec3a840eec8bd3998f3d5e24f35a4 442 Gene3D G3DSA:3.40.50.1010 3 148 8.9E-24 T 11-10-2018 TF3313_2197 e99ec3a840eec8bd3998f3d5e24f35a4 442 SUPERFAMILY SSF52540 22 417 3.13E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2197 e99ec3a840eec8bd3998f3d5e24f35a4 442 Pfam PF02562 PhoH-like protein 231 437 9.2E-54 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 TF3313_2197 e99ec3a840eec8bd3998f3d5e24f35a4 442 SMART SM00670 5 134 1.1E-7 T 11-10-2018 IPR002716 PIN domain TF3313_0159 004bcbfd2bdec3f6b1d5f223a9814eeb 356 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 181 200 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site TF3313_0159 004bcbfd2bdec3f6b1d5f223a9814eeb 356 Pfam PF00266 Aminotransferase class-V 5 344 2.3E-44 T 11-10-2018 IPR000192 Aminotransferase class V domain TF3313_0159 004bcbfd2bdec3f6b1d5f223a9814eeb 356 PIRSF PIRSF000525 1 356 3.6E-136 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 TF3313_0159 004bcbfd2bdec3f6b1d5f223a9814eeb 356 Gene3D G3DSA:3.40.640.10 17 251 1.2E-78 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TF3313_0159 004bcbfd2bdec3f6b1d5f223a9814eeb 356 SUPERFAMILY SSF53383 2 353 2.8E-104 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TF3313_0159 004bcbfd2bdec3f6b1d5f223a9814eeb 356 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 354 4.0E-140 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 TF3313_0159 004bcbfd2bdec3f6b1d5f223a9814eeb 356 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 1 355 46.562 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 TF3313_0159 004bcbfd2bdec3f6b1d5f223a9814eeb 356 Gene3D G3DSA:3.90.1150.10 252 356 1.7E-37 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TF3313_1122 1e98c1db41f5943cb6ecdf8db3f2c95e 268 Pfam PF02230 Phospholipase/Carboxylesterase 54 247 5.1E-11 T 11-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 TF3313_1122 1e98c1db41f5943cb6ecdf8db3f2c95e 268 SUPERFAMILY SSF53474 48 249 1.67E-34 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TF3313_1122 1e98c1db41f5943cb6ecdf8db3f2c95e 268 Gene3D G3DSA:3.40.50.1820 25 262 1.5E-61 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TF3313_1881 fb95aec88a5a0c7ad60def445a6e92e8 495 Gene3D G3DSA:3.20.20.70 4 495 5.0E-146 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_1881 fb95aec88a5a0c7ad60def445a6e92e8 495 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 11 487 2.8E-109 T 11-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 TF3313_1881 fb95aec88a5a0c7ad60def445a6e92e8 495 PIRSF PIRSF000130 4 495 9.7E-136 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 TF3313_1881 fb95aec88a5a0c7ad60def445a6e92e8 495 SUPERFAMILY SSF54631 110 214 3.92E-20 T 11-10-2018 TF3313_1881 fb95aec88a5a0c7ad60def445a6e92e8 495 SMART SM01240 8 487 5.0E-178 T 11-10-2018 TF3313_1881 fb95aec88a5a0c7ad60def445a6e92e8 495 SUPERFAMILY SSF51412 6 491 4.19E-101 T 11-10-2018 TF3313_1881 fb95aec88a5a0c7ad60def445a6e92e8 495 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 307 319 - T 11-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 TF3313_1326 eb5f927ad0b604ed2a1062d7ca52cb25 275 Hamap MF_00258 Glutamate racemase [murI]. 2 264 30.145 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TF3313_1326 eb5f927ad0b604ed2a1062d7ca52cb25 275 SUPERFAMILY SSF53681 114 270 1.96E-33 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TF3313_1326 eb5f927ad0b604ed2a1062d7ca52cb25 275 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 187 197 - T 11-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TF3313_1326 eb5f927ad0b604ed2a1062d7ca52cb25 275 Gene3D G3DSA:3.40.50.1860 4 262 9.8E-83 T 11-10-2018 TF3313_1326 eb5f927ad0b604ed2a1062d7ca52cb25 275 TIGRFAM TIGR00067 glut_race: glutamate racemase 4 252 5.4E-56 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TF3313_1326 eb5f927ad0b604ed2a1062d7ca52cb25 275 SUPERFAMILY SSF53681 3 108 1.83E-28 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TF3313_1326 eb5f927ad0b604ed2a1062d7ca52cb25 275 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 68 76 - T 11-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TF3313_1326 eb5f927ad0b604ed2a1062d7ca52cb25 275 Gene3D G3DSA:3.40.50.1860 100 214 9.8E-83 T 11-10-2018 TF3313_1326 eb5f927ad0b604ed2a1062d7ca52cb25 275 Pfam PF01177 Asp/Glu/Hydantoin racemase 4 221 1.1E-36 T 11-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TF3313_0879 35b72733fff97f59482e2de3e4cf1747 141 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 1 140 16.984 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 TF3313_0879 35b72733fff97f59482e2de3e4cf1747 141 Pfam PF02130 Uncharacterized protein family UPF0054 20 134 1.8E-23 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 TF3313_0879 35b72733fff97f59482e2de3e4cf1747 141 SUPERFAMILY SSF55486 3 138 6.1E-33 T 11-10-2018 TF3313_0879 35b72733fff97f59482e2de3e4cf1747 141 Gene3D G3DSA:3.40.390.30 8 139 1.8E-29 T 11-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 TF3313_0879 35b72733fff97f59482e2de3e4cf1747 141 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 36 136 4.4E-28 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 TF3313_1343 409d4dd3753acb966f467b636caee066 340 Pfam PF13186 Iron-sulfur cluster-binding domain 230 287 3.4E-7 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain TF3313_1343 409d4dd3753acb966f467b636caee066 340 Gene3D G3DSA:3.20.20.70 3 286 8.2E-31 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_1343 409d4dd3753acb966f467b636caee066 340 SUPERFAMILY SSF102114 7 288 1.44E-32 T 11-10-2018 TF3313_1343 409d4dd3753acb966f467b636caee066 340 Pfam PF04055 Radical SAM superfamily 15 163 4.1E-12 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TF3313_2129 0e00d80447fec8c1cea73442ef897aa1 241 TIGRFAM TIGR03488 cas_Cas5p: CRISPR-associated protein Cas5, subtype PGING 6 237 7.7E-129 T 11-10-2018 IPR020031 CRISPR-associated protein Cas5p TF3313_1165 143c08e91d693d4b83988c545039b92c 876 Pfam PF17162 Domain of unknown function (DUF5118) 52 99 2.2E-18 T 11-10-2018 IPR033428 Domain of unknown function DUF5118 TF3313_1165 143c08e91d693d4b83988c545039b92c 876 SUPERFAMILY SSF55486 238 519 9.11E-24 T 11-10-2018 TF3313_1165 143c08e91d693d4b83988c545039b92c 876 Pfam PF17148 Domain of unknown function (DUF5117) 112 296 8.0E-47 T 11-10-2018 IPR033413 Domain of unknown function DUF5117 TF3313_1165 143c08e91d693d4b83988c545039b92c 876 Pfam PF16313 Met-zincin 429 748 4.7E-106 T 11-10-2018 IPR032534 Domain of unknown function DUF4953 TF3313_1165 143c08e91d693d4b83988c545039b92c 876 Gene3D G3DSA:3.40.390.10 407 520 3.5E-6 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 TF3313_1943 c1a647fa4f20f085ea7044d863dd57f2 509 Gene3D G3DSA:3.30.1370.10 196 293 9.6E-9 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 TF3313_1943 c1a647fa4f20f085ea7044d863dd57f2 509 Pfam PF00013 KH domain 202 257 4.2E-7 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 TF3313_1943 c1a647fa4f20f085ea7044d863dd57f2 509 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 5 509 3.7E-193 T 11-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 TF3313_1943 c1a647fa4f20f085ea7044d863dd57f2 509 SMART SM00322 197 267 1.6E-5 T 11-10-2018 IPR004087 K Homology domain GO:0003676 TF3313_1943 c1a647fa4f20f085ea7044d863dd57f2 509 TIGRFAM TIGR00277 HDIG: HDIG domain 321 397 9.1E-18 T 11-10-2018 IPR006675 HDIG domain TF3313_1943 c1a647fa4f20f085ea7044d863dd57f2 509 SUPERFAMILY SSF109604 303 459 3.14E-27 T 11-10-2018 TF3313_1943 c1a647fa4f20f085ea7044d863dd57f2 509 Gene3D G3DSA:1.10.3210.10 312 463 8.4E-21 T 11-10-2018 TF3313_1943 c1a647fa4f20f085ea7044d863dd57f2 509 Hamap MF_00335 Ribonuclease Y [rny]. 1 509 22.954 T 11-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 TF3313_1943 c1a647fa4f20f085ea7044d863dd57f2 509 SMART SM00471 321 427 1.2E-11 T 11-10-2018 IPR003607 HD/PDEase domain TF3313_1943 c1a647fa4f20f085ea7044d863dd57f2 509 SUPERFAMILY SSF54791 195 286 1.67E-15 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 TF3313_1943 c1a647fa4f20f085ea7044d863dd57f2 509 Pfam PF01966 HD domain 326 416 3.5E-18 T 11-10-2018 IPR006674 HD domain TF3313_1943 c1a647fa4f20f085ea7044d863dd57f2 509 Pfam PF12072 Domain of unknown function (DUF3552) 25 193 4.8E-35 T 11-10-2018 IPR022711 Ribonuclease Y, N-terminal TF3313_0964 ab79418718c78033e126199b25d903dc 133 Pfam PF01230 HIT domain 11 101 3.1E-16 T 11-10-2018 IPR001310 Histidine triad (HIT) protein TF3313_0964 ab79418718c78033e126199b25d903dc 133 PRINTS PR00332 Histidine triad family signature 25 43 1.1E-14 T 11-10-2018 IPR001310 Histidine triad (HIT) protein TF3313_0964 ab79418718c78033e126199b25d903dc 133 PRINTS PR00332 Histidine triad family signature 4 20 1.1E-14 T 11-10-2018 IPR001310 Histidine triad (HIT) protein TF3313_0964 ab79418718c78033e126199b25d903dc 133 PRINTS PR00332 Histidine triad family signature 87 97 1.1E-14 T 11-10-2018 IPR001310 Histidine triad (HIT) protein TF3313_0964 ab79418718c78033e126199b25d903dc 133 SUPERFAMILY SSF54197 3 131 1.24E-32 T 11-10-2018 IPR036265 HIT-like superfamily TF3313_0964 ab79418718c78033e126199b25d903dc 133 Gene3D G3DSA:3.30.428.10 1 132 5.9E-37 T 11-10-2018 IPR036265 HIT-like superfamily TF3313_0664 e72f473f6fe9a90a43043b6dc5531118 625 Gene3D G3DSA:3.40.50.300 116 278 7.9E-23 T 11-10-2018 TF3313_0664 e72f473f6fe9a90a43043b6dc5531118 625 Gene3D G3DSA:3.40.50.300 394 590 4.0E-48 T 11-10-2018 TF3313_0664 e72f473f6fe9a90a43043b6dc5531118 625 Pfam PF01935 Domain of unknown function DUF87 133 444 6.0E-43 T 11-10-2018 IPR002789 Helicase HerA, central domain TF3313_0664 e72f473f6fe9a90a43043b6dc5531118 625 SUPERFAMILY SSF52540 136 581 6.75E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0664 e72f473f6fe9a90a43043b6dc5531118 625 Pfam PF05872 Bacterial protein of unknown function (DUF853) 458 560 3.3E-5 T 11-10-2018 IPR033186 Helicase HerA-like C-terminal TF3313_0611 8371ed79f7a027708ffff48eeee0b7b1 290 Pfam PF03755 YicC-like family, N-terminal region 2 155 1.8E-39 T 11-10-2018 IPR013527 YicC-like, N-terminal TF3313_0611 8371ed79f7a027708ffff48eeee0b7b1 290 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 289 3.3E-59 T 11-10-2018 IPR005229 Conserved hypothetical protein CHP00255 TF3313_0611 8371ed79f7a027708ffff48eeee0b7b1 290 Pfam PF08340 Domain of unknown function (DUF1732) 206 289 7.5E-30 T 11-10-2018 IPR013551 Domain of unknown function DUF1732 TF3313_1597 61e989fa4054b32af35ddbbcd5fb7cc0 942 Gene3D G3DSA:3.30.830.10 267 481 7.8E-19 T 11-10-2018 TF3313_1597 61e989fa4054b32af35ddbbcd5fb7cc0 942 SUPERFAMILY SSF63411 530 740 4.02E-21 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TF3313_1597 61e989fa4054b32af35ddbbcd5fb7cc0 942 SUPERFAMILY SSF63411 767 938 9.95E-18 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TF3313_1597 61e989fa4054b32af35ddbbcd5fb7cc0 942 Gene3D G3DSA:3.30.830.10 763 938 8.6E-19 T 11-10-2018 TF3313_1597 61e989fa4054b32af35ddbbcd5fb7cc0 942 Pfam PF05193 Peptidase M16 inactive domain 696 874 3.8E-14 T 11-10-2018 IPR007863 Peptidase M16, C-terminal TF3313_1597 61e989fa4054b32af35ddbbcd5fb7cc0 942 Pfam PF05193 Peptidase M16 inactive domain 214 397 1.3E-17 T 11-10-2018 IPR007863 Peptidase M16, C-terminal TF3313_1597 61e989fa4054b32af35ddbbcd5fb7cc0 942 SUPERFAMILY SSF63411 33 258 1.19E-39 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TF3313_1597 61e989fa4054b32af35ddbbcd5fb7cc0 942 SUPERFAMILY SSF63411 278 485 8.03E-12 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TF3313_1597 61e989fa4054b32af35ddbbcd5fb7cc0 942 Gene3D G3DSA:3.30.830.10 534 743 4.2E-16 T 11-10-2018 TF3313_1597 61e989fa4054b32af35ddbbcd5fb7cc0 942 Pfam PF00675 Insulinase (Peptidase family M16) 51 177 4.0E-23 T 11-10-2018 IPR011765 Peptidase M16, N-terminal TF3313_1597 61e989fa4054b32af35ddbbcd5fb7cc0 942 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 67 90 - T 11-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 TF3313_1597 61e989fa4054b32af35ddbbcd5fb7cc0 942 Gene3D G3DSA:3.30.830.10 32 263 4.0E-66 T 11-10-2018 TF3313_1434 175098c90dcca03f08e64707923e654b 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 8.3E-37 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 TF3313_1434 175098c90dcca03f08e64707923e654b 72 SMART SM00316 4 72 1.4E-5 T 11-10-2018 IPR022967 RNA-binding domain, S1 TF3313_1434 175098c90dcca03f08e64707923e654b 72 Gene3D G3DSA:2.40.50.140 1 72 1.2E-35 T 11-10-2018 TF3313_1434 175098c90dcca03f08e64707923e654b 72 SUPERFAMILY SSF50249 1 71 1.96E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TF3313_1434 175098c90dcca03f08e64707923e654b 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.723 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 TF3313_1434 175098c90dcca03f08e64707923e654b 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 3.4E-27 T 11-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 TF3313_2068 8d61932c2bc3c7c60d863c79cba61e53 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 252 276 1.2E-5 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TF3313_2068 8d61932c2bc3c7c60d863c79cba61e53 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 290 309 1.2E-5 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TF3313_2068 8d61932c2bc3c7c60d863c79cba61e53 368 Pfam PF12698 ABC-2 family transporter protein 20 360 7.3E-51 T 11-10-2018 TF3313_0473 fb2ba817325a61ccd24461c5bf770677 145 Gene3D G3DSA:3.30.70.100 23 144 1.2E-28 T 11-10-2018 TF3313_0473 fb2ba817325a61ccd24461c5bf770677 145 SUPERFAMILY SSF54909 57 144 2.01E-28 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel TF3313_0473 fb2ba817325a61ccd24461c5bf770677 145 Pfam PF03992 Antibiotic biosynthesis monooxygenase 57 130 4.0E-20 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain TF3313_0644 f954f28ed8cda7a4842f1fabf9e2854e 285 SMART SM00849 44 255 3.6E-11 T 11-10-2018 IPR001279 Metallo-beta-lactamase TF3313_0644 f954f28ed8cda7a4842f1fabf9e2854e 285 Pfam PF00753 Metallo-beta-lactamase superfamily 49 231 4.6E-14 T 11-10-2018 IPR001279 Metallo-beta-lactamase TF3313_0644 f954f28ed8cda7a4842f1fabf9e2854e 285 Gene3D G3DSA:3.60.15.10 2 266 6.8E-71 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TF3313_0644 f954f28ed8cda7a4842f1fabf9e2854e 285 SUPERFAMILY SSF56281 5 277 9.43E-35 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TF3313_1262 994fb8d43024c1e3b2dde1b00391ce23 261 Gene3D G3DSA:1.10.287.1080 131 260 3.6E-44 T 11-10-2018 TF3313_1262 994fb8d43024c1e3b2dde1b00391ce23 261 SUPERFAMILY SSF101386 138 232 4.86E-21 T 11-10-2018 TF3313_1262 994fb8d43024c1e3b2dde1b00391ce23 261 Gene3D G3DSA:1.10.287.1080 6 128 1.3E-39 T 11-10-2018 TF3313_1262 994fb8d43024c1e3b2dde1b00391ce23 261 TIGRFAM TIGR00444 mazG: MazG family protein 18 257 7.4E-85 T 11-10-2018 IPR011551 NTP pyrophosphohydrolase MazG TF3313_1262 994fb8d43024c1e3b2dde1b00391ce23 261 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 31 104 3.9E-26 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core TF3313_1262 994fb8d43024c1e3b2dde1b00391ce23 261 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 168 227 5.5E-8 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core TF3313_1262 994fb8d43024c1e3b2dde1b00391ce23 261 SUPERFAMILY SSF101386 11 107 7.1E-22 T 11-10-2018 TF3313_0525 2a48a4de0f09fe41e3c594c895c8a026 664 Gene3D G3DSA:2.60.40.10 474 579 1.0E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_0525 2a48a4de0f09fe41e3c594c895c8a026 664 Gene3D G3DSA:2.60.40.10 280 366 3.7E-6 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_0525 2a48a4de0f09fe41e3c594c895c8a026 664 SUPERFAMILY SSF49265 480 653 3.78E-12 T 11-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 TF3313_0525 2a48a4de0f09fe41e3c594c895c8a026 664 Gene3D G3DSA:2.60.40.10 373 472 5.9E-6 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_0525 2a48a4de0f09fe41e3c594c895c8a026 664 Gene3D G3DSA:2.60.40.10 580 660 1.1E-9 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_0525 2a48a4de0f09fe41e3c594c895c8a026 664 SUPERFAMILY SSF49265 290 415 3.07E-6 T 11-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 TF3313_2308 34e6db5d1403514682224604eeef2bc8 770 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 156 3.9E-17 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_2308 34e6db5d1403514682224604eeef2bc8 770 Gene3D G3DSA:2.40.170.20 43 770 3.5E-138 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_2308 34e6db5d1403514682224604eeef2bc8 770 SUPERFAMILY SSF56935 34 770 2.56E-104 T 11-10-2018 TF3313_2308 34e6db5d1403514682224604eeef2bc8 770 Pfam PF00593 TonB dependent receptor 250 766 5.0E-41 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_0925 ee21830fda78ce6f5286988b79070eab 686 Gene3D G3DSA:3.30.470.20 486 682 1.7E-59 T 11-10-2018 TF3313_0925 ee21830fda78ce6f5286988b79070eab 686 Gene3D G3DSA:3.40.50.720 3 130 1.7E-30 T 11-10-2018 TF3313_0925 ee21830fda78ce6f5286988b79070eab 686 Gene3D G3DSA:3.30.1490.20 501 569 1.7E-59 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TF3313_0925 ee21830fda78ce6f5286988b79070eab 686 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 155 294 1.4E-33 T 11-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain TF3313_0925 ee21830fda78ce6f5286988b79070eab 686 SUPERFAMILY SSF56059 491 684 6.48E-32 T 11-10-2018 TF3313_0925 ee21830fda78ce6f5286988b79070eab 686 SUPERFAMILY SSF52210 301 453 1.57E-17 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 TF3313_0925 ee21830fda78ce6f5286988b79070eab 686 SUPERFAMILY SSF51735 3 139 3.88E-26 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_0925 ee21830fda78ce6f5286988b79070eab 686 Pfam PF13549 ATP-grasp domain 479 684 7.3E-55 T 11-10-2018 TF3313_0925 ee21830fda78ce6f5286988b79070eab 686 Gene3D G3DSA:3.40.50.261 132 297 6.2E-36 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 TF3313_0925 ee21830fda78ce6f5286988b79070eab 686 SUPERFAMILY SSF52210 133 292 5.76E-23 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 TF3313_0925 ee21830fda78ce6f5286988b79070eab 686 SMART SM00881 6 101 7.0E-25 T 11-10-2018 IPR003781 CoA-binding GO:0048037 TF3313_0925 ee21830fda78ce6f5286988b79070eab 686 Gene3D G3DSA:3.40.50.261 299 457 9.8E-19 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 TF3313_0925 ee21830fda78ce6f5286988b79070eab 686 Pfam PF13380 CoA binding domain 11 136 1.2E-16 T 11-10-2018 IPR003781 CoA-binding GO:0048037 TF3313_1329 a7a9f59dea275bd9bc8438b358a3e647 251 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TF3313_1329 a7a9f59dea275bd9bc8438b358a3e647 251 SMART SM00382 29 219 5.1E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_1329 a7a9f59dea275bd9bc8438b358a3e647 251 Gene3D G3DSA:3.40.50.300 1 221 1.8E-51 T 11-10-2018 TF3313_1329 a7a9f59dea275bd9bc8438b358a3e647 251 SUPERFAMILY SSF52540 3 211 1.96E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1329 a7a9f59dea275bd9bc8438b358a3e647 251 Pfam PF00005 ABC transporter 20 164 3.9E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TF3313_1057 ec0cd684dcde80de8e24534c349df5b6 472 Gene3D G3DSA:3.40.50.720 235 395 1.4E-245 T 11-10-2018 TF3313_1057 ec0cd684dcde80de8e24534c349df5b6 472 SUPERFAMILY SSF52283 8 472 2.66E-117 T 11-10-2018 TF3313_1057 ec0cd684dcde80de8e24534c349df5b6 472 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 254 270 - T 11-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 TF3313_1057 ec0cd684dcde80de8e24534c349df5b6 472 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 11 464 9.2E-197 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 TF3313_1057 ec0cd684dcde80de8e24534c349df5b6 472 Gene3D G3DSA:3.40.50.1480 13 472 1.4E-245 T 11-10-2018 TF3313_1057 ec0cd684dcde80de8e24534c349df5b6 472 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 232 394 3.4E-85 T 11-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 TF3313_1057 ec0cd684dcde80de8e24534c349df5b6 472 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 82 96 - T 11-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 TF3313_1057 ec0cd684dcde80de8e24534c349df5b6 472 SMART SM00997 232 394 3.8E-116 T 11-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 TF3313_1057 ec0cd684dcde80de8e24534c349df5b6 472 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 11 471 7.8E-153 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 TF3313_1057 ec0cd684dcde80de8e24534c349df5b6 472 PIRSF PIRSF001109 1 472 3.1E-197 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 TF3313_1057 ec0cd684dcde80de8e24534c349df5b6 472 SMART SM00996 10 471 0.0 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 TF3313_1057 ec0cd684dcde80de8e24534c349df5b6 472 SUPERFAMILY SSF51735 232 394 1.71E-83 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_1057 ec0cd684dcde80de8e24534c349df5b6 472 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 6 464 49.495 T 11-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 TF3313_2002 acd521fd8ef15efb6010d89695640e7f 538 Gene3D G3DSA:3.30.565.10 107 259 1.4E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TF3313_2002 acd521fd8ef15efb6010d89695640e7f 538 Pfam PF12833 Helix-turn-helix domain 455 534 2.8E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TF3313_2002 acd521fd8ef15efb6010d89695640e7f 538 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 149 251 8.7E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TF3313_2002 acd521fd8ef15efb6010d89695640e7f 538 SMART SM00388 35 99 1.4E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TF3313_2002 acd521fd8ef15efb6010d89695640e7f 538 SUPERFAMILY SSF52172 285 413 3.7E-38 T 11-10-2018 IPR011006 CheY-like superfamily TF3313_2002 acd521fd8ef15efb6010d89695640e7f 538 Gene3D G3DSA:1.10.10.60 430 535 2.2E-26 T 11-10-2018 TF3313_2002 acd521fd8ef15efb6010d89695640e7f 538 SMART SM00448 288 400 2.4E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TF3313_2002 acd521fd8ef15efb6010d89695640e7f 538 SUPERFAMILY SSF47384 27 98 1.57E-15 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TF3313_2002 acd521fd8ef15efb6010d89695640e7f 538 SUPERFAMILY SSF55874 88 256 4.32E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TF3313_2002 acd521fd8ef15efb6010d89695640e7f 538 SMART SM00387 144 254 2.9E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TF3313_2002 acd521fd8ef15efb6010d89695640e7f 538 Gene3D G3DSA:3.40.50.2300 273 419 3.1E-37 T 11-10-2018 TF3313_2002 acd521fd8ef15efb6010d89695640e7f 538 Pfam PF00512 His Kinase A (phospho-acceptor) domain 36 98 2.4E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TF3313_2002 acd521fd8ef15efb6010d89695640e7f 538 SMART SM00342 449 533 1.9E-26 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TF3313_2002 acd521fd8ef15efb6010d89695640e7f 538 SUPERFAMILY SSF46689 486 535 6.72E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TF3313_2002 acd521fd8ef15efb6010d89695640e7f 538 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 486 529 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TF3313_2002 acd521fd8ef15efb6010d89695640e7f 538 Gene3D G3DSA:1.10.287.130 20 100 1.2E-18 T 11-10-2018 TF3313_2002 acd521fd8ef15efb6010d89695640e7f 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 199 209 1.8E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_2002 acd521fd8ef15efb6010d89695640e7f 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 181 195 1.8E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_2002 acd521fd8ef15efb6010d89695640e7f 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 238 251 1.8E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_2002 acd521fd8ef15efb6010d89695640e7f 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 214 232 1.8E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_2002 acd521fd8ef15efb6010d89695640e7f 538 Pfam PF00072 Response regulator receiver domain 291 401 5.0E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TF3313_2019 a610fec42bb36bdedf0d4378555a90f1 404 SUPERFAMILY SSF117281 35 300 6.54E-25 T 11-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 TF3313_2019 a610fec42bb36bdedf0d4378555a90f1 404 TIGRFAM TIGR03548 mutarot_permut: cyclically-permuted mutarotase family protein 50 399 1.4E-132 T 11-10-2018 IPR019937 Cyclically-permuted mutarotase family TF3313_2019 a610fec42bb36bdedf0d4378555a90f1 404 Gene3D G3DSA:2.120.10.80 76 314 4.0E-23 T 11-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 TF3313_2019 a610fec42bb36bdedf0d4378555a90f1 404 Pfam PF01344 Kelch motif 165 210 5.2E-6 T 11-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 TF3313_1000 c5a1e55ce6f1a1860188f3ef14325890 285 SUPERFAMILY SSF50486 201 283 3.14E-14 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 TF3313_1000 c5a1e55ce6f1a1860188f3ef14325890 285 Gene3D G3DSA:3.40.50.12230 4 285 2.8E-53 T 11-10-2018 TF3313_1000 c5a1e55ce6f1a1860188f3ef14325890 285 Pfam PF02911 Formyl transferase, C-terminal domain 201 282 4.2E-11 T 11-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TF3313_1000 c5a1e55ce6f1a1860188f3ef14325890 285 SUPERFAMILY SSF53328 4 197 1.7E-33 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TF3313_1000 c5a1e55ce6f1a1860188f3ef14325890 285 Pfam PF00551 Formyl transferase 5 168 1.0E-17 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TF3313_0776 4ba4e2ac145c1edd9611e92c5ec16e4b 253 Pfam PF13566 Domain of unknown function (DUF4130 84 251 5.7E-49 T 11-10-2018 IPR025404 Domain of unknown function DUF4130 TF3313_0776 4ba4e2ac145c1edd9611e92c5ec16e4b 253 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 5 252 2.9E-72 T 11-10-2018 IPR023875 DNA metabolism protein, putative TF3313_1484 4df78ae184a124e11562188260a8133b 121 SUPERFAMILY SSF158446 2 111 1.83E-31 T 11-10-2018 IPR036583 23S rRNA-intervening sequence superfamily TF3313_1484 4df78ae184a124e11562188260a8133b 121 PIRSF PIRSF035652 1 119 1.9E-40 T 11-10-2018 IPR012657 23S rRNA-intervening sequence protein TF3313_1484 4df78ae184a124e11562188260a8133b 121 Gene3D G3DSA:1.20.1440.60 1 115 7.8E-39 T 11-10-2018 IPR036583 23S rRNA-intervening sequence superfamily TF3313_1484 4df78ae184a124e11562188260a8133b 121 Pfam PF05635 23S rRNA-intervening sequence protein 3 106 3.4E-26 T 11-10-2018 IPR012657 23S rRNA-intervening sequence protein TF3313_1484 4df78ae184a124e11562188260a8133b 121 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 6 113 2.9E-27 T 11-10-2018 IPR012657 23S rRNA-intervening sequence protein TF3313_2517 696b021164ad9c52561e604500c06df9 855 Gene3D G3DSA:2.120.10.90 495 815 2.3E-114 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal TF3313_2517 696b021164ad9c52561e604500c06df9 855 SMART SM00434 10 463 3.5E-266 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TF3313_2517 696b021164ad9c52561e604500c06df9 855 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 7 813 0.0 T 11-10-2018 TF3313_2517 696b021164ad9c52561e604500c06df9 855 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 815 23.589 T 11-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TF3313_2517 696b021164ad9c52561e604500c06df9 855 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 554 601 0.0016 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TF3313_2517 696b021164ad9c52561e604500c06df9 855 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 716 762 1.1E-12 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TF3313_2517 696b021164ad9c52561e604500c06df9 855 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 767 810 8.8E-10 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TF3313_2517 696b021164ad9c52561e604500c06df9 855 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 663 709 8.8E-13 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TF3313_2517 696b021164ad9c52561e604500c06df9 855 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 503 548 9.1E-9 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TF3313_2517 696b021164ad9c52561e604500c06df9 855 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 615 659 2.6E-6 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TF3313_2517 696b021164ad9c52561e604500c06df9 855 SUPERFAMILY SSF56719 29 486 1.57E-173 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TF3313_2517 696b021164ad9c52561e604500c06df9 855 Gene3D G3DSA:3.30.1360.40 236 331 5.4E-207 T 11-10-2018 TF3313_2517 696b021164ad9c52561e604500c06df9 855 Gene3D G3DSA:1.10.268.10 368 464 5.4E-207 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TF3313_2517 696b021164ad9c52561e604500c06df9 855 Gene3D G3DSA:3.90.199.10 32 485 5.4E-207 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 TF3313_2517 696b021164ad9c52561e604500c06df9 855 SUPERFAMILY SSF101904 499 823 2.35E-95 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal TF3313_2517 696b021164ad9c52561e604500c06df9 855 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 31 467 1.9E-160 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TF3313_0908 3d32868aa6f1b1daf9a9de973339e6b5 304 Gene3D G3DSA:2.60.120.260 126 295 7.6E-20 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_0908 3d32868aa6f1b1daf9a9de973339e6b5 304 SUPERFAMILY SSF49785 149 288 5.85E-15 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_0908 3d32868aa6f1b1daf9a9de973339e6b5 304 Pfam PF16323 Domain of unknown function (DUF4959) 36 118 7.0E-8 T 11-10-2018 IPR032527 Domain of unknown function DUF4959 TF3313_1599 6ffbd6e4a5eb24ef71a8909a9a907df0 379 Pfam PF02371 Transposase IS116/IS110/IS902 family 231 310 3.7E-19 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 TF3313_1599 6ffbd6e4a5eb24ef71a8909a9a907df0 379 Pfam PF01548 Transposase 17 130 1.5E-13 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 TF3313_0443 6ffbd6e4a5eb24ef71a8909a9a907df0 379 Pfam PF02371 Transposase IS116/IS110/IS902 family 231 310 3.7E-19 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 TF3313_0443 6ffbd6e4a5eb24ef71a8909a9a907df0 379 Pfam PF01548 Transposase 17 130 1.5E-13 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 TF3313_1516 7150a3481ea3673ce737f29e7317bdf9 402 Gene3D G3DSA:3.90.79.10 202 373 1.1E-8 T 11-10-2018 TF3313_1516 7150a3481ea3673ce737f29e7317bdf9 402 SUPERFAMILY SSF55811 214 369 2.84E-6 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TF3313_0877 ae4fd59d5b9557d10373e922d23ef77f 323 Gene3D G3DSA:3.40.50.720 99 289 2.6E-105 T 11-10-2018 TF3313_0877 ae4fd59d5b9557d10373e922d23ef77f 323 SUPERFAMILY SSF52283 3 129 1.15E-29 T 11-10-2018 TF3313_0877 ae4fd59d5b9557d10373e922d23ef77f 323 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 289 8.0E-60 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 TF3313_0877 ae4fd59d5b9557d10373e922d23ef77f 323 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 18 320 4.6E-25 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 TF3313_0877 ae4fd59d5b9557d10373e922d23ef77f 323 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site TF3313_0877 ae4fd59d5b9557d10373e922d23ef77f 323 Gene3D G3DSA:3.40.50.720 5 315 2.6E-105 T 11-10-2018 TF3313_0877 ae4fd59d5b9557d10373e922d23ef77f 323 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 151 178 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 TF3313_0877 ae4fd59d5b9557d10373e922d23ef77f 323 SUPERFAMILY SSF51735 102 289 8.65E-55 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_0761 4a2ed75c35c49df899d63e31182380d1 310 Gene3D G3DSA:3.40.50.10800 9 290 6.1E-114 T 11-10-2018 TF3313_0761 4a2ed75c35c49df899d63e31182380d1 310 Gene3D G3DSA:3.40.50.10800 173 265 6.1E-114 T 11-10-2018 TF3313_0761 4a2ed75c35c49df899d63e31182380d1 310 SUPERFAMILY SSF142754 6 309 4.58E-115 T 11-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 TF3313_0761 4a2ed75c35c49df899d63e31182380d1 310 Gene3D G3DSA:3.40.50.10800 89 308 6.1E-114 T 11-10-2018 TF3313_0761 4a2ed75c35c49df899d63e31182380d1 310 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 6 310 7.3E-114 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 TF3313_0761 4a2ed75c35c49df899d63e31182380d1 310 Hamap MF_00568 Quinolinate synthase A [nadA]. 5 309 42.894 T 11-10-2018 IPR023066 Quinolinate synthase A, type 2 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 TF3313_0761 4a2ed75c35c49df899d63e31182380d1 310 Pfam PF02445 Quinolinate synthetase A protein 10 308 8.8E-118 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 TF3313_1261 ebe50527df7d28911865ef7b13a2076f 692 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 246 438 4.4E-17 T 11-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 TF3313_1261 ebe50527df7d28911865ef7b13a2076f 692 Pfam PF11412 Disulphide bond corrector protein DsbC 38 150 2.2E-9 T 11-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain TF3313_1261 ebe50527df7d28911865ef7b13a2076f 692 Pfam PF13899 Thioredoxin-like 551 613 1.4E-12 T 11-10-2018 TF3313_1261 ebe50527df7d28911865ef7b13a2076f 692 Gene3D G3DSA:3.40.30.10 547 691 3.7E-46 T 11-10-2018 TF3313_1261 ebe50527df7d28911865ef7b13a2076f 692 SUPERFAMILY SSF52833 515 688 1.08E-24 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TF3313_2658 b392de0c0403886ac9f1a847bcf4890f 122 Pfam PF03840 Preprotein translocase SecG subunit 4 69 4.1E-17 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 TF3313_2658 b392de0c0403886ac9f1a847bcf4890f 122 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 2 69 8.8E-19 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 TF3313_2425 ed2bb7a41510c1c87785875cc0589aa3 265 SUPERFAMILY SSF49899 27 263 1.17E-53 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily TF3313_2425 ed2bb7a41510c1c87785875cc0589aa3 265 Gene3D G3DSA:2.60.120.200 28 265 1.7E-54 T 11-10-2018 TF3313_2425 ed2bb7a41510c1c87785875cc0589aa3 265 Pfam PF00722 Glycosyl hydrolases family 16 95 257 3.9E-20 T 11-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 TF3313_0812 fd8796750a77d8b083a977caed490ecb 188 SUPERFAMILY SSF50475 4 174 3.93E-42 T 11-10-2018 TF3313_0812 fd8796750a77d8b083a977caed490ecb 188 Gene3D G3DSA:2.30.110.10 1 188 1.8E-56 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TF3313_0812 fd8796750a77d8b083a977caed490ecb 188 SMART SM00903 10 157 1.3E-14 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 TF3313_0812 fd8796750a77d8b083a977caed490ecb 188 Pfam PF01613 Flavin reductase like domain 12 172 4.3E-24 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 TF3313_1429 7c4eb79029651949e519f677f86f4c25 171 SUPERFAMILY SSF54768 13 80 2.72E-22 T 11-10-2018 TF3313_1429 7c4eb79029651949e519f677f86f4c25 171 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 3 167 33.214 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 TF3313_1429 7c4eb79029651949e519f677f86f4c25 171 Gene3D G3DSA:3.30.160.20 5 77 3.7E-29 T 11-10-2018 TF3313_1429 7c4eb79029651949e519f677f86f4c25 171 SUPERFAMILY SSF54211 83 162 2.17E-24 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TF3313_1429 7c4eb79029651949e519f677f86f4c25 171 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 14 166 2.5E-62 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 TF3313_1429 7c4eb79029651949e519f677f86f4c25 171 Gene3D G3DSA:3.30.230.10 78 170 1.7E-33 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TF3313_1429 7c4eb79029651949e519f677f86f4c25 171 Pfam PF00333 Ribosomal protein S5, N-terminal domain 15 79 1.2E-28 T 11-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 TF3313_1429 7c4eb79029651949e519f677f86f4c25 171 ProSitePatterns PS00585 Ribosomal protein S5 signature. 32 64 - T 11-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site TF3313_1429 7c4eb79029651949e519f677f86f4c25 171 Pfam PF03719 Ribosomal protein S5, C-terminal domain 91 161 2.9E-28 T 11-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 TF3313_0233 360743a0d6b819ac84e1dbbbea17ce3c 422 Pfam PF13635 Domain of unknown function (DUF4143) 222 369 6.7E-9 T 11-10-2018 IPR025420 Domain of unknown function DUF4143 TF3313_0233 360743a0d6b819ac84e1dbbbea17ce3c 422 Pfam PF13173 AAA domain 39 174 7.4E-32 T 11-10-2018 TF3313_0233 360743a0d6b819ac84e1dbbbea17ce3c 422 SUPERFAMILY SSF52540 23 226 2.85E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2083 083b098a3b87b6e0e2b0d5d5467f863e 314 Gene3D G3DSA:1.10.10.10 1 84 8.5E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_2083 083b098a3b87b6e0e2b0d5d5467f863e 314 Gene3D G3DSA:3.40.190.10 91 293 1.9E-56 T 11-10-2018 TF3313_2083 083b098a3b87b6e0e2b0d5d5467f863e 314 Pfam PF03466 LysR substrate binding domain 89 295 2.8E-26 T 11-10-2018 IPR005119 LysR, substrate-binding TF3313_2083 083b098a3b87b6e0e2b0d5d5467f863e 314 SUPERFAMILY SSF53850 89 294 6.15E-24 T 11-10-2018 TF3313_2083 083b098a3b87b6e0e2b0d5d5467f863e 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.2E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TF3313_2083 083b098a3b87b6e0e2b0d5d5467f863e 314 SUPERFAMILY SSF46785 1 84 6.23E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TF3313_2083 083b098a3b87b6e0e2b0d5d5467f863e 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TF3313_2083 083b098a3b87b6e0e2b0d5d5467f863e 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TF3313_2083 083b098a3b87b6e0e2b0d5d5467f863e 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TF3313_2083 083b098a3b87b6e0e2b0d5d5467f863e 314 Gene3D G3DSA:3.40.190.10 161 264 1.9E-56 T 11-10-2018 TF3313_0635 42b12f0655e14fa43c02d6ae989e4a9b 83 Hamap MF_01396 ATP synthase subunit c [atpH]. 16 81 14.349 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0635 42b12f0655e14fa43c02d6ae989e4a9b 83 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 26 80 6.6E-14 T 11-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 TF3313_0635 42b12f0655e14fa43c02d6ae989e4a9b 83 SUPERFAMILY SSF81333 11 80 5.49E-16 T 11-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily TF3313_0635 42b12f0655e14fa43c02d6ae989e4a9b 83 PRINTS PR00124 ATP synthase C subunit signature 39 54 3.5E-13 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0635 42b12f0655e14fa43c02d6ae989e4a9b 83 PRINTS PR00124 ATP synthase C subunit signature 18 37 3.5E-13 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0635 42b12f0655e14fa43c02d6ae989e4a9b 83 PRINTS PR00124 ATP synthase C subunit signature 56 81 3.5E-13 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0635 42b12f0655e14fa43c02d6ae989e4a9b 83 Gene3D G3DSA:1.20.20.10 12 82 6.0E-19 T 11-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0635 42b12f0655e14fa43c02d6ae989e4a9b 83 ProSitePatterns PS00605 ATP synthase c subunit signature. 46 67 - T 11-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0635 42b12f0655e14fa43c02d6ae989e4a9b 83 Pfam PF00137 ATP synthase subunit C 18 79 9.6E-13 T 11-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 TF3313_2450 28c5cd706cdefaf931852e6a7bed5e11 493 Gene3D G3DSA:2.60.40.1180 45 490 8.4E-88 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta TF3313_2450 28c5cd706cdefaf931852e6a7bed5e11 493 SUPERFAMILY SSF51445 66 428 1.96E-64 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily TF3313_2450 28c5cd706cdefaf931852e6a7bed5e11 493 Gene3D G3DSA:3.20.20.80 63 430 8.4E-88 T 11-10-2018 TF3313_2450 28c5cd706cdefaf931852e6a7bed5e11 493 Pfam PF02055 Glycosyl hydrolase family 30 TIM-barrel domain 79 175 4.3E-20 T 11-10-2018 IPR033453 Glycosyl hydrolase family 30, TIM-barrel domain Reactome: R-HSA-1660662|Reactome: R-HSA-390471 TF3313_2450 28c5cd706cdefaf931852e6a7bed5e11 493 Pfam PF02055 Glycosyl hydrolase family 30 TIM-barrel domain 222 424 2.0E-9 T 11-10-2018 IPR033453 Glycosyl hydrolase family 30, TIM-barrel domain Reactome: R-HSA-1660662|Reactome: R-HSA-390471 TF3313_0883 4d6d131f83a0f144ac23698e556f1c69 173 Hamap MF_01405 dITP/XTP pyrophosphatase. 1 172 37.011 T 11-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 TF3313_0883 4d6d131f83a0f144ac23698e556f1c69 173 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 19 170 2.5E-45 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 TF3313_0883 4d6d131f83a0f144ac23698e556f1c69 173 SUPERFAMILY SSF52972 5 171 7.59E-52 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like TF3313_0883 4d6d131f83a0f144ac23698e556f1c69 173 Pfam PF01725 Ham1 family 19 167 3.3E-46 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 TF3313_0883 4d6d131f83a0f144ac23698e556f1c69 173 Gene3D G3DSA:3.90.950.10 1 172 2.4E-58 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like TF3313_1316 af5cc04efa6fa7d74f597acc353ac839 229 Gene3D G3DSA:3.40.50.2020 88 228 7.2E-22 T 11-10-2018 TF3313_1316 af5cc04efa6fa7d74f597acc353ac839 229 Pfam PF00156 Phosphoribosyl transferase domain 99 212 2.6E-7 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 TF3313_1316 af5cc04efa6fa7d74f597acc353ac839 229 SUPERFAMILY SSF53271 64 226 1.57E-26 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like TF3313_1267 0d738dda9cdc6afd036f5576cd406d30 419 SUPERFAMILY SSF56300 155 419 6.11E-40 T 11-10-2018 TF3313_1267 0d738dda9cdc6afd036f5576cd406d30 419 Pfam PF16656 Purple acid Phosphatase, N-terminal domain 52 147 1.7E-12 T 11-10-2018 IPR015914 Purple acid phosphatase, N-terminal GO:0003993|GO:0046872 TF3313_1267 0d738dda9cdc6afd036f5576cd406d30 419 SUPERFAMILY SSF49363 46 146 7.46E-11 T 11-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 TF3313_1267 0d738dda9cdc6afd036f5576cd406d30 419 Pfam PF00149 Calcineurin-like phosphoesterase 157 342 3.7E-13 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TF3313_1267 0d738dda9cdc6afd036f5576cd406d30 419 Gene3D G3DSA:3.60.21.10 152 418 9.1E-29 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like TF3313_1744 59a4f3427cc39363ec1a3a5b20ca5528 1074 SUPERFAMILY SSF52540 6 842 1.33E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1744 59a4f3427cc39363ec1a3a5b20ca5528 1074 Gene3D G3DSA:1.10.3170.10 131 354 3.7E-46 T 11-10-2018 TF3313_1744 59a4f3427cc39363ec1a3a5b20ca5528 1074 Pfam PF13361 UvrD-like helicase C-terminal domain 700 837 9.9E-9 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 TF3313_1744 59a4f3427cc39363ec1a3a5b20ca5528 1074 Gene3D G3DSA:3.40.50.300 456 609 3.6E-7 T 11-10-2018 TF3313_1744 59a4f3427cc39363ec1a3a5b20ca5528 1074 Pfam PF00580 UvrD/REP helicase N-terminal domain 7 439 2.6E-39 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 TF3313_1744 59a4f3427cc39363ec1a3a5b20ca5528 1074 Gene3D G3DSA:3.40.50.300 6 433 3.7E-46 T 11-10-2018 TF3313_0010 ceaccf95c8cbe25d8a48416ae742689a 489 SUPERFAMILY SSF52058 62 328 3.74E-26 T 11-10-2018 TF3313_0010 ceaccf95c8cbe25d8a48416ae742689a 489 Gene3D G3DSA:3.80.10.10 31 332 1.2E-47 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily TF3313_0270 202433dd64a32e3f8431f49ae59a37ff 846 SUPERFAMILY SSF53474 578 834 1.61E-65 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TF3313_0270 202433dd64a32e3f8431f49ae59a37ff 846 Gene3D G3DSA:3.40.50.1820 567 840 3.5E-66 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TF3313_0270 202433dd64a32e3f8431f49ae59a37ff 846 SUPERFAMILY SSF82171 206 564 1.44E-29 T 11-10-2018 TF3313_0270 202433dd64a32e3f8431f49ae59a37ff 846 Gene3D G3DSA:2.120.10.30 164 337 3.4E-6 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TF3313_0270 202433dd64a32e3f8431f49ae59a37ff 846 Gene3D G3DSA:2.120.10.30 338 450 3.3E-9 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TF3313_0270 202433dd64a32e3f8431f49ae59a37ff 846 Pfam PF00326 Prolyl oligopeptidase family 630 834 2.3E-46 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 TF3313_0702 ce21e2ec519cccf211a76c5178a00e8d 137 Gene3D G3DSA:2.40.128.280 22 137 9.2E-29 T 11-10-2018 TF3313_0702 ce21e2ec519cccf211a76c5178a00e8d 137 Pfam PF16585 Lipocalin-like domain 16 137 3.1E-8 T 11-10-2018 IPR024311 Lipocalin-like domain TF3313_1388 b3e30d4fe6b94e8ab451fa7f0be6049f 1127 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 307 337 1.2E-13 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_1388 b3e30d4fe6b94e8ab451fa7f0be6049f 1127 Gene3D G3DSA:2.40.170.20 422 1019 8.0E-20 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_1388 b3e30d4fe6b94e8ab451fa7f0be6049f 1127 SUPERFAMILY SSF49464 140 220 2.49E-15 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_1388 b3e30d4fe6b94e8ab451fa7f0be6049f 1127 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 140 1127 4.6E-165 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_1388 b3e30d4fe6b94e8ab451fa7f0be6049f 1127 SUPERFAMILY SSF56935 220 1013 5.49E-62 T 11-10-2018 TF3313_1388 b3e30d4fe6b94e8ab451fa7f0be6049f 1127 Gene3D G3DSA:2.170.130.10 215 336 3.9E-21 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_1388 b3e30d4fe6b94e8ab451fa7f0be6049f 1127 Gene3D G3DSA:2.60.40.1120 140 214 1.5E-5 T 11-10-2018 TF3313_1388 b3e30d4fe6b94e8ab451fa7f0be6049f 1127 Pfam PF07715 TonB-dependent Receptor Plug Domain 231 330 3.4E-14 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_1388 b3e30d4fe6b94e8ab451fa7f0be6049f 1127 Pfam PF13715 CarboxypepD_reg-like domain 141 222 1.3E-15 T 11-10-2018 TF3313_0447 cbca4e09062c7c9b91463c3d74f1ac7c 334 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 4 327 64.528 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 TF3313_0447 cbca4e09062c7c9b91463c3d74f1ac7c 334 Gene3D G3DSA:3.40.47.10 1 333 1.0E-118 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TF3313_0447 cbca4e09062c7c9b91463c3d74f1ac7c 334 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 110 188 4.4E-29 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 TF3313_0447 cbca4e09062c7c9b91463c3d74f1ac7c 334 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 327 4.7E-109 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 TF3313_0447 cbca4e09062c7c9b91463c3d74f1ac7c 334 SUPERFAMILY SSF53901 8 327 5.19E-66 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TF3313_0447 cbca4e09062c7c9b91463c3d74f1ac7c 334 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 241 327 2.0E-33 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 TF3313_0808 d9b5818f3653e23207d1ba86110f29f9 416 PIRSF PIRSF006728 1 415 1.7E-124 T 11-10-2018 IPR008135 Competence-induced protein CinA TF3313_0808 d9b5818f3653e23207d1ba86110f29f9 416 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 264 408 9.7E-46 T 11-10-2018 IPR008136 CinA, C-terminal TF3313_0808 d9b5818f3653e23207d1ba86110f29f9 416 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 1 165 2.5E-28 T 11-10-2018 IPR001453 MoaB/Mog domain TF3313_0808 d9b5818f3653e23207d1ba86110f29f9 416 Pfam PF02464 Competence-damaged protein 259 410 3.9E-55 T 11-10-2018 IPR008136 CinA, C-terminal TF3313_0808 d9b5818f3653e23207d1ba86110f29f9 416 SUPERFAMILY SSF142433 255 411 1.83E-52 T 11-10-2018 IPR036653 CinA-like, C-terminal TF3313_0808 d9b5818f3653e23207d1ba86110f29f9 416 Gene3D G3DSA:3.90.950.20 243 411 1.3E-56 T 11-10-2018 IPR036653 CinA-like, C-terminal TF3313_0808 d9b5818f3653e23207d1ba86110f29f9 416 SMART SM00852 4 171 3.0E-34 T 11-10-2018 IPR001453 MoaB/Mog domain TF3313_0808 d9b5818f3653e23207d1ba86110f29f9 416 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 398 7.1E-91 T 11-10-2018 IPR008135 Competence-induced protein CinA TF3313_0808 d9b5818f3653e23207d1ba86110f29f9 416 SUPERFAMILY SSF53218 1 190 4.97E-38 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily TF3313_0808 d9b5818f3653e23207d1ba86110f29f9 416 Gene3D G3DSA:3.40.980.10 1 171 3.3E-49 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily TF3313_0808 d9b5818f3653e23207d1ba86110f29f9 416 Pfam PF00994 Probable molybdopterin binding domain 4 170 6.2E-32 T 11-10-2018 IPR001453 MoaB/Mog domain TF3313_0808 d9b5818f3653e23207d1ba86110f29f9 416 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 416 132.523 T 11-10-2018 IPR008135 Competence-induced protein CinA TF3313_0929 64feede5ce1bcf41731fdc7cb857a386 362 Gene3D G3DSA:1.10.287.130 297 362 2.9E-19 T 11-10-2018 TF3313_0929 64feede5ce1bcf41731fdc7cb857a386 362 SUPERFAMILY SSF52540 39 359 6.69E-90 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0929 64feede5ce1bcf41731fdc7cb857a386 362 Gene3D G3DSA:3.40.50.300 85 295 4.3E-75 T 11-10-2018 TF3313_0929 64feede5ce1bcf41731fdc7cb857a386 362 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 51 355 7.9E-99 T 11-10-2018 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 TF3313_0929 64feede5ce1bcf41731fdc7cb857a386 362 Pfam PF03308 ArgK protein 56 325 1.4E-99 T 11-10-2018 TF3313_0929 64feede5ce1bcf41731fdc7cb857a386 362 Gene3D G3DSA:1.20.5.170 40 84 1.4E-15 T 11-10-2018 TF3313_2472 f750aa64026a346b299fd9bb38f9b46f 255 TIGRFAM TIGR00761 argB: acetylglutamate kinase 5 240 1.2E-56 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 TF3313_2472 f750aa64026a346b299fd9bb38f9b46f 255 Gene3D G3DSA:3.40.1160.10 1 255 7.9E-66 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TF3313_2472 f750aa64026a346b299fd9bb38f9b46f 255 Hamap MF_00082 Acetylglutamate kinase [argB]. 2 253 39.195 T 11-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 TF3313_2472 f750aa64026a346b299fd9bb38f9b46f 255 Pfam PF00696 Amino acid kinase family 3 242 5.4E-35 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 TF3313_2472 f750aa64026a346b299fd9bb38f9b46f 255 SUPERFAMILY SSF53633 1 254 1.19E-50 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TF3313_2472 f750aa64026a346b299fd9bb38f9b46f 255 PIRSF PIRSF000728 1 250 9.4E-73 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 TF3313_0993 b0e0ff0a16426cc25cf37350d3ce391e 238 Pfam PF02348 Cytidylyltransferase 9 193 4.4E-30 T 11-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 TF3313_0993 b0e0ff0a16426cc25cf37350d3ce391e 238 Gene3D G3DSA:3.90.550.10 3 234 4.3E-68 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_0993 b0e0ff0a16426cc25cf37350d3ce391e 238 SUPERFAMILY SSF53448 5 233 1.48E-52 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_0807 f06706ff53fcea80c5020a5b3108a9d6 315 SUPERFAMILY SSF52317 18 297 1.83E-98 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TF3313_0807 f06706ff53fcea80c5020a5b3108a9d6 315 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 299 2.1E-129 T 11-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 TF3313_0807 f06706ff53fcea80c5020a5b3108a9d6 315 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 3.0E-113 T 11-10-2018 TF3313_0807 f06706ff53fcea80c5020a5b3108a9d6 315 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 41.989 T 11-10-2018 IPR033752 MetA family TF3313_0807 f06706ff53fcea80c5020a5b3108a9d6 315 Pfam PF04204 Homoserine O-succinyltransferase 2 299 9.8E-133 T 11-10-2018 IPR033752 MetA family TF3313_0807 f06706ff53fcea80c5020a5b3108a9d6 315 PIRSF PIRSF000450 1 308 1.5E-142 T 11-10-2018 IPR033752 MetA family TF3313_0807 f06706ff53fcea80c5020a5b3108a9d6 315 Gene3D G3DSA:3.40.50.880 1 300 4.9E-123 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TF3313_2058 891bf95a28998a7da375bfbc0c2a4b49 125 SMART SM00530 67 122 1.0E-12 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TF3313_2058 891bf95a28998a7da375bfbc0c2a4b49 125 Gene3D G3DSA:1.10.260.40 59 125 3.0E-14 T 11-10-2018 TF3313_2058 891bf95a28998a7da375bfbc0c2a4b49 125 Pfam PF01381 Helix-turn-helix 72 120 3.1E-15 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TF3313_2058 891bf95a28998a7da375bfbc0c2a4b49 125 SUPERFAMILY SSF47413 67 124 5.63E-14 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TF3313_1275 a39bc4dae51fca5b8280f65ee3f28f67 248 PIRSF PIRSF036427 8 248 4.1E-48 T 11-10-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 TF3313_1275 a39bc4dae51fca5b8280f65ee3f28f67 248 Gene3D G3DSA:3.40.1010.10 7 138 3.8E-24 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 TF3313_1275 a39bc4dae51fca5b8280f65ee3f28f67 248 Gene3D G3DSA:3.30.950.10 139 248 3.9E-26 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 TF3313_1275 a39bc4dae51fca5b8280f65ee3f28f67 248 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 12 224 8.4E-29 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 TF3313_1275 a39bc4dae51fca5b8280f65ee3f28f67 248 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 15 29 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TF3313_1275 a39bc4dae51fca5b8280f65ee3f28f67 248 SUPERFAMILY SSF53790 7 242 8.9E-35 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 TF3313_1381 ed80873c0e7a1f78378432816460558c 414 SUPERFAMILY SSF51261 215 413 3.98E-29 T 11-10-2018 IPR011055 Duplicated hybrid motif TF3313_1381 ed80873c0e7a1f78378432816460558c 414 Gene3D G3DSA:2.70.70.10 268 413 1.3E-28 T 11-10-2018 IPR011055 Duplicated hybrid motif TF3313_1381 ed80873c0e7a1f78378432816460558c 414 Pfam PF01551 Peptidase family M23 315 409 2.2E-20 T 11-10-2018 IPR016047 Peptidase M23 TF3313_2261 7cd4126cdc7ba7f89625324527d1064e 109 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 5 92 6.2E-14 T 11-10-2018 IPR032871 AHH domain-containing protein TF3313_0250 75c000728fcdf6eb103caee0f4bb99aa 259 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 55 245 3.6E-21 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain TF3313_0250 75c000728fcdf6eb103caee0f4bb99aa 259 Gene3D G3DSA:3.40.50.1110 30 258 2.6E-84 T 11-10-2018 IPR036514 SGNH hydrolase superfamily TF3313_0250 75c000728fcdf6eb103caee0f4bb99aa 259 SUPERFAMILY SSF52266 47 253 5.95E-38 T 11-10-2018 TF3313_1657 71684519de6db6fa05583c63a3868faa 298 Gene3D G3DSA:3.30.360.10 138 251 5.6E-108 T 11-10-2018 TF3313_1657 71684519de6db6fa05583c63a3868faa 298 PIRSF PIRSF025648 1 298 7.1E-125 T 11-10-2018 IPR010190 Diaminopimelate dehydrogenase, Ddh GO:0009089|GO:0047850 KEGG: 00300+1.4.1.16|MetaCyc: PWY-2942 TF3313_1657 71684519de6db6fa05583c63a3868faa 298 TIGRFAM TIGR01921 DAP-DH: diaminopimelate dehydrogenase 1 298 5.5E-116 T 11-10-2018 IPR010190 Diaminopimelate dehydrogenase, Ddh GO:0009089|GO:0047850 KEGG: 00300+1.4.1.16|MetaCyc: PWY-2942 TF3313_1657 71684519de6db6fa05583c63a3868faa 298 Pfam PF16654 Diaminopimelic acid dehydrogenase C-terminal domain 119 174 1.5E-13 T 11-10-2018 IPR032094 Meso-diaminopimelate D-dehydrogenase, C-terminal KEGG: 00300+1.4.1.16|MetaCyc: PWY-2942 TF3313_1657 71684519de6db6fa05583c63a3868faa 298 SUPERFAMILY SSF55347 120 251 3.79E-48 T 11-10-2018 TF3313_1657 71684519de6db6fa05583c63a3868faa 298 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 85 9.3E-6 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 TF3313_1657 71684519de6db6fa05583c63a3868faa 298 SUPERFAMILY SSF51735 3 141 6.0E-23 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_1657 71684519de6db6fa05583c63a3868faa 298 Gene3D G3DSA:3.40.50.720 4 282 5.6E-108 T 11-10-2018 TF3313_1999 efa16b00c96ead1d5efd41f8fb043d11 862 SMART SM00382 196 341 2.5E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_1999 efa16b00c96ead1d5efd41f8fb043d11 862 SMART SM00382 595 772 7.2E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_1999 efa16b00c96ead1d5efd41f8fb043d11 862 Pfam PF07724 AAA domain (Cdc48 subfamily) 594 765 8.9E-53 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TF3313_1999 efa16b00c96ead1d5efd41f8fb043d11 862 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 629 647 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 TF3313_1999 efa16b00c96ead1d5efd41f8fb043d11 862 Gene3D G3DSA:3.40.50.300 146 340 2.2E-75 T 11-10-2018 TF3313_1999 efa16b00c96ead1d5efd41f8fb043d11 862 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 93 142 5.9E-13 T 11-10-2018 IPR004176 Clp, N-terminal TF3313_1999 efa16b00c96ead1d5efd41f8fb043d11 862 SUPERFAMILY SSF52540 155 543 1.01E-97 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1999 efa16b00c96ead1d5efd41f8fb043d11 862 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 771 849 5.9E-25 T 11-10-2018 IPR019489 Clp ATPase, C-terminal TF3313_1999 efa16b00c96ead1d5efd41f8fb043d11 862 Gene3D G3DSA:1.10.8.60 771 862 2.6E-27 T 11-10-2018 TF3313_1999 efa16b00c96ead1d5efd41f8fb043d11 862 SUPERFAMILY SSF81923 4 154 2.75E-31 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 TF3313_1999 efa16b00c96ead1d5efd41f8fb043d11 862 Gene3D G3DSA:1.10.1780.10 2 145 5.9E-26 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 TF3313_1999 efa16b00c96ead1d5efd41f8fb043d11 862 Gene3D G3DSA:3.40.50.300 548 769 3.6E-87 T 11-10-2018 TF3313_1999 efa16b00c96ead1d5efd41f8fb043d11 862 SUPERFAMILY SSF52540 544 843 2.06E-80 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1999 efa16b00c96ead1d5efd41f8fb043d11 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 706 720 1.1E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 TF3313_1999 efa16b00c96ead1d5efd41f8fb043d11 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 599 617 1.1E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 TF3313_1999 efa16b00c96ead1d5efd41f8fb043d11 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 644 662 1.1E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 TF3313_1999 efa16b00c96ead1d5efd41f8fb043d11 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 673 691 1.1E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 TF3313_1999 efa16b00c96ead1d5efd41f8fb043d11 862 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 201 332 5.9E-14 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TF3313_1999 efa16b00c96ead1d5efd41f8fb043d11 862 Gene3D G3DSA:3.40.50.300 342 542 4.8E-67 T 11-10-2018 TF3313_1999 efa16b00c96ead1d5efd41f8fb043d11 862 SMART SM01086 771 860 7.2E-36 T 11-10-2018 IPR019489 Clp ATPase, C-terminal TF3313_1999 efa16b00c96ead1d5efd41f8fb043d11 862 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 292 304 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 TF3313_1999 efa16b00c96ead1d5efd41f8fb043d11 862 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 861 0.0 T 11-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 TF3313_0069 d9f49359d3f79bcd4ad110201c9bda03 431 SUPERFAMILY SSF102114 91 392 1.26E-36 T 11-10-2018 TF3313_0069 d9f49359d3f79bcd4ad110201c9bda03 431 Pfam PF04055 Radical SAM superfamily 96 258 3.4E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TF3313_0069 d9f49359d3f79bcd4ad110201c9bda03 431 Gene3D G3DSA:3.20.20.70 88 418 8.2E-52 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_0069 d9f49359d3f79bcd4ad110201c9bda03 431 Pfam PF13353 4Fe-4S single cluster domain 97 205 2.7E-7 T 11-10-2018 TF3313_0069 d9f49359d3f79bcd4ad110201c9bda03 431 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 319 399 4.7E-11 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain TF3313_2487 44b690ff8fb81c05f741d2695362c371 570 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 34 349 9.8E-96 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 TF3313_2487 44b690ff8fb81c05f741d2695362c371 570 Gene3D G3DSA:3.40.50.620 34 251 3.4E-95 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_2487 44b690ff8fb81c05f741d2695362c371 570 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 564 48.89 T 11-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 TF3313_2487 44b690ff8fb81c05f741d2695362c371 570 Gene3D G3DSA:2.40.240.10 352 561 1.1E-78 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TF3313_2487 44b690ff8fb81c05f741d2695362c371 570 SUPERFAMILY SSF52374 15 350 1.07E-91 T 11-10-2018 TF3313_2487 44b690ff8fb81c05f741d2695362c371 570 SUPERFAMILY SSF50715 352 562 6.28E-71 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TF3313_2487 44b690ff8fb81c05f741d2695362c371 570 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 352 544 3.2E-59 T 11-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TF3313_2487 44b690ff8fb81c05f741d2695362c371 570 Gene3D G3DSA:2.40.240.10 360 478 1.1E-78 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TF3313_2487 44b690ff8fb81c05f741d2695362c371 570 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 34 566 1.8E-212 T 11-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TF3313_2487 44b690ff8fb81c05f741d2695362c371 570 PRINTS PR00987 Glutamyl-tRNA synthetase signature 66 79 4.2E-7 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TF3313_2487 44b690ff8fb81c05f741d2695362c371 570 PRINTS PR00987 Glutamyl-tRNA synthetase signature 215 225 4.2E-7 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TF3313_2487 44b690ff8fb81c05f741d2695362c371 570 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 49 4.2E-7 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TF3313_2487 44b690ff8fb81c05f741d2695362c371 570 Gene3D G3DSA:1.10.1160.10 273 351 2.1E-31 T 11-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 TF3313_2487 44b690ff8fb81c05f741d2695362c371 570 Gene3D G3DSA:3.90.800.10 106 214 3.4E-95 T 11-10-2018 TF3313_1545 d08437f4ca97b451403379c97ad45cca 200 Pfam PF01351 Ribonuclease HII 13 189 4.0E-35 T 11-10-2018 IPR024567 Ribonuclease HII/HIII domain TF3313_1545 d08437f4ca97b451403379c97ad45cca 200 SUPERFAMILY SSF53098 5 190 2.28E-64 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TF3313_1545 d08437f4ca97b451403379c97ad45cca 200 Hamap MF_00052_B Ribonuclease HII [rnhB]. 11 191 34.58 T 11-10-2018 IPR022898 Ribonuclease HII GO:0004523 TF3313_1545 d08437f4ca97b451403379c97ad45cca 200 Gene3D G3DSA:3.30.420.10 2 197 2.2E-71 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TF3313_1421 b7cc20c9a13808369458fde3ff5a0ac6 89 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 11 86 25.54 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1421 b7cc20c9a13808369458fde3ff5a0ac6 89 Gene3D G3DSA:2.40.50.140 10 89 3.4E-35 T 11-10-2018 TF3313_1421 b7cc20c9a13808369458fde3ff5a0ac6 89 PRINTS PR00973 Ribosomal protein S17 family signature 72 79 1.0E-13 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1421 b7cc20c9a13808369458fde3ff5a0ac6 89 PRINTS PR00973 Ribosomal protein S17 family signature 62 72 1.0E-13 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1421 b7cc20c9a13808369458fde3ff5a0ac6 89 PRINTS PR00973 Ribosomal protein S17 family signature 30 53 1.0E-13 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1421 b7cc20c9a13808369458fde3ff5a0ac6 89 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 11 82 9.1E-37 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1421 b7cc20c9a13808369458fde3ff5a0ac6 89 ProSitePatterns PS00056 Ribosomal protein S17 signature. 62 74 - T 11-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1421 b7cc20c9a13808369458fde3ff5a0ac6 89 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 15 82 9.0E-31 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1421 b7cc20c9a13808369458fde3ff5a0ac6 89 SUPERFAMILY SSF50249 11 88 5.14E-33 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TF3313_1421 b7cc20c9a13808369458fde3ff5a0ac6 89 Pfam PF00366 Ribosomal protein S17 16 82 2.1E-33 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_0207 aabcc2c42cb04ceca1dbeecb6ff10021 864 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 459 475 - T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TF3313_0207 aabcc2c42cb04ceca1dbeecb6ff10021 864 Gene3D G3DSA:3.40.50.300 335 647 3.5E-74 T 11-10-2018 TF3313_0207 aabcc2c42cb04ceca1dbeecb6ff10021 864 SUPERFAMILY SSF160443 788 861 2.48E-7 T 11-10-2018 IPR036063 Smr domain superfamily TF3313_0207 aabcc2c42cb04ceca1dbeecb6ff10021 864 SUPERFAMILY SSF52540 336 561 2.4E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0207 aabcc2c42cb04ceca1dbeecb6ff10021 864 Gene3D G3DSA:3.30.1370.110 776 864 2.8E-22 T 11-10-2018 TF3313_0207 aabcc2c42cb04ceca1dbeecb6ff10021 864 Pfam PF01713 Smr domain 789 863 1.5E-16 T 11-10-2018 IPR002625 Smr domain TF3313_0207 aabcc2c42cb04ceca1dbeecb6ff10021 864 SMART SM00534 377 562 5.7E-51 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TF3313_0207 aabcc2c42cb04ceca1dbeecb6ff10021 864 SUPERFAMILY SSF48334 62 329 2.49E-17 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily TF3313_0207 aabcc2c42cb04ceca1dbeecb6ff10021 864 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 42 863 18.055 T 11-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 TF3313_0207 aabcc2c42cb04ceca1dbeecb6ff10021 864 PIRSF PIRSF005814 43 864 9.0E-203 T 11-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 TF3313_0207 aabcc2c42cb04ceca1dbeecb6ff10021 864 Pfam PF00488 MutS domain V 380 560 7.2E-30 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TF3313_0207 aabcc2c42cb04ceca1dbeecb6ff10021 864 SMART SM00463 786 864 8.1E-12 T 11-10-2018 IPR002625 Smr domain TF3313_0207 aabcc2c42cb04ceca1dbeecb6ff10021 864 SMART SM00533 49 358 6.4E-10 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 TF3313_0207 aabcc2c42cb04ceca1dbeecb6ff10021 864 TIGRFAM TIGR01069 mutS2: MutS2 family protein 48 863 3.1E-172 T 11-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 TF3313_0707 5be8965a49bd0b0765ada128ff5c20f6 439 SUPERFAMILY SSF56801 43 414 3.01E-36 T 11-10-2018 TF3313_0707 5be8965a49bd0b0765ada128ff5c20f6 439 Gene3D G3DSA:3.30.300.30 330 433 2.2E-12 T 11-10-2018 TF3313_0707 5be8965a49bd0b0765ada128ff5c20f6 439 Pfam PF14535 AMP-binding enzyme C-terminal domain 337 431 5.4E-6 T 11-10-2018 IPR028154 AMP-dependent ligase, C-terminal TF3313_0707 5be8965a49bd0b0765ada128ff5c20f6 439 Pfam PF00501 AMP-binding enzyme 77 290 1.4E-11 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TF3313_0707 5be8965a49bd0b0765ada128ff5c20f6 439 Gene3D G3DSA:3.40.50.12780 2 329 3.5E-90 T 11-10-2018 TF3313_0864 0f3eceddb90e2f8bca71417e0756e7a1 686 SUPERFAMILY SSF47323 397 599 1.29E-39 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_0864 0f3eceddb90e2f8bca71417e0756e7a1 686 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 16 27 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_0864 0f3eceddb90e2f8bca71417e0756e7a1 686 Gene3D G3DSA:2.40.50.140 575 686 3.6E-37 T 11-10-2018 TF3313_0864 0f3eceddb90e2f8bca71417e0756e7a1 686 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 10 549 1.3E-165 T 11-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TF3313_0864 0f3eceddb90e2f8bca71417e0756e7a1 686 SUPERFAMILY SSF52374 8 392 2.95E-95 T 11-10-2018 TF3313_0864 0f3eceddb90e2f8bca71417e0756e7a1 686 Pfam PF01588 Putative tRNA binding domain 591 683 4.2E-27 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 TF3313_0864 0f3eceddb90e2f8bca71417e0756e7a1 686 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 562 686 8.7E-41 T 11-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TF3313_0864 0f3eceddb90e2f8bca71417e0756e7a1 686 Gene3D G3DSA:3.40.50.620 10 387 3.2E-162 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_0864 0f3eceddb90e2f8bca71417e0756e7a1 686 Hamap MF_00098 Methionine--tRNA ligase [metG]. 7 559 40.354 T 11-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TF3313_0864 0f3eceddb90e2f8bca71417e0756e7a1 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 392 403 6.2E-29 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TF3313_0864 0f3eceddb90e2f8bca71417e0756e7a1 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 44 58 6.2E-29 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TF3313_0864 0f3eceddb90e2f8bca71417e0756e7a1 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 256 267 6.2E-29 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TF3313_0864 0f3eceddb90e2f8bca71417e0756e7a1 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 297 312 6.2E-29 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TF3313_0864 0f3eceddb90e2f8bca71417e0756e7a1 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 11 24 6.2E-29 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TF3313_0864 0f3eceddb90e2f8bca71417e0756e7a1 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 92 103 6.2E-29 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TF3313_0864 0f3eceddb90e2f8bca71417e0756e7a1 686 Gene3D G3DSA:2.20.28.20 144 178 3.2E-162 T 11-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TF3313_0864 0f3eceddb90e2f8bca71417e0756e7a1 686 Pfam PF09334 tRNA synthetases class I (M) 10 404 1.6E-162 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_0864 0f3eceddb90e2f8bca71417e0756e7a1 686 SUPERFAMILY SSF57770 144 178 7.59E-12 T 11-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TF3313_0864 0f3eceddb90e2f8bca71417e0756e7a1 686 SUPERFAMILY SSF50249 584 685 2.94E-32 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TF3313_0864 0f3eceddb90e2f8bca71417e0756e7a1 686 Gene3D G3DSA:1.10.730.10 388 559 2.5E-42 T 11-10-2018 TF3313_0864 0f3eceddb90e2f8bca71417e0756e7a1 686 Pfam PF08264 Anticodon-binding domain of tRNA 426 513 4.1E-8 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 TF3313_0444 43ea49b8e7a084bdd03c22cce5d04fdd 437 PIRSF PIRSF006485 1 437 2.9E-163 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 TF3313_0444 43ea49b8e7a084bdd03c22cce5d04fdd 437 Gene3D G3DSA:3.40.50.300 171 351 8.0E-47 T 11-10-2018 TF3313_0444 43ea49b8e7a084bdd03c22cce5d04fdd 437 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 434 1.9E-163 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 TF3313_0444 43ea49b8e7a084bdd03c22cce5d04fdd 437 Gene3D G3DSA:3.30.300.20 354 437 2.2E-25 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta TF3313_0444 43ea49b8e7a084bdd03c22cce5d04fdd 437 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 354 435 4.8E-27 T 11-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like TF3313_0444 43ea49b8e7a084bdd03c22cce5d04fdd 437 Hamap MF_00195 GTPase Der [der]. 2 437 37.144 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 TF3313_0444 43ea49b8e7a084bdd03c22cce5d04fdd 437 SUPERFAMILY SSF52540 138 436 5.77E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0444 43ea49b8e7a084bdd03c22cce5d04fdd 437 Pfam PF01926 50S ribosome-binding GTPase 177 295 5.8E-25 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TF3313_0444 43ea49b8e7a084bdd03c22cce5d04fdd 437 Pfam PF01926 50S ribosome-binding GTPase 5 120 8.7E-30 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TF3313_0444 43ea49b8e7a084bdd03c22cce5d04fdd 437 SUPERFAMILY SSF52540 1 166 5.57E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0444 43ea49b8e7a084bdd03c22cce5d04fdd 437 Gene3D G3DSA:3.40.50.300 4 167 1.1E-44 T 11-10-2018 TF3313_0444 43ea49b8e7a084bdd03c22cce5d04fdd 437 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 1.4E-9 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TF3313_0444 43ea49b8e7a084bdd03c22cce5d04fdd 437 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.4E-9 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TF3313_0444 43ea49b8e7a084bdd03c22cce5d04fdd 437 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 176 317 1.9E-22 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TF3313_0444 43ea49b8e7a084bdd03c22cce5d04fdd 437 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 125 1.9E-25 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TF3313_0570 b5fbd56d635e7fefb79561f2389f1b18 61 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 4 57 2.3E-11 T 11-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 TF3313_0570 b5fbd56d635e7fefb79561f2389f1b18 61 SUPERFAMILY SSF54786 1 57 1.84E-10 T 11-10-2018 TF3313_0570 b5fbd56d635e7fefb79561f2389f1b18 61 Gene3D G3DSA:3.30.920.30 1 58 8.2E-10 T 11-10-2018 IPR038570 HicA superfamily TF3313_1171 7d72464478ec8cc6ed35245324bfa6e5 1358 SUPERFAMILY SSF63829 21 264 3.07E-10 T 11-10-2018 TF3313_1171 7d72464478ec8cc6ed35245324bfa6e5 1358 SUPERFAMILY SSF50998 365 600 2.59E-5 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily TF3313_1171 7d72464478ec8cc6ed35245324bfa6e5 1358 Gene3D G3DSA:2.130.10.10 32 349 2.2E-62 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TF3313_1171 7d72464478ec8cc6ed35245324bfa6e5 1358 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1295 1337 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TF3313_1171 7d72464478ec8cc6ed35245324bfa6e5 1358 Gene3D G3DSA:3.40.50.2300 1080 1226 2.1E-31 T 11-10-2018 TF3313_1171 7d72464478ec8cc6ed35245324bfa6e5 1358 SUPERFAMILY SSF52172 1091 1223 9.53E-33 T 11-10-2018 IPR011006 CheY-like superfamily TF3313_1171 7d72464478ec8cc6ed35245324bfa6e5 1358 Gene3D G3DSA:3.30.565.10 894 1053 1.2E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TF3313_1171 7d72464478ec8cc6ed35245324bfa6e5 1358 Gene3D G3DSA:1.10.287.130 798 891 3.9E-16 T 11-10-2018 TF3313_1171 7d72464478ec8cc6ed35245324bfa6e5 1358 SUPERFAMILY SSF47384 817 892 1.49E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TF3313_1171 7d72464478ec8cc6ed35245324bfa6e5 1358 Gene3D G3DSA:2.130.10.10 362 655 1.5E-27 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TF3313_1171 7d72464478ec8cc6ed35245324bfa6e5 1358 SMART SM00387 940 1055 1.5E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TF3313_1171 7d72464478ec8cc6ed35245324bfa6e5 1358 SMART SM00388 827 893 8.3E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TF3313_1171 7d72464478ec8cc6ed35245324bfa6e5 1358 SMART SM00342 1258 1341 7.0E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TF3313_1171 7d72464478ec8cc6ed35245324bfa6e5 1358 Pfam PF00512 His Kinase A (phospho-acceptor) domain 830 891 1.5E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TF3313_1171 7d72464478ec8cc6ed35245324bfa6e5 1358 Pfam PF07495 Y_Y_Y domain 710 772 5.4E-14 T 11-10-2018 IPR011123 Two component regulator three Y TF3313_1171 7d72464478ec8cc6ed35245324bfa6e5 1358 Gene3D G3DSA:1.10.10.60 1236 1353 1.5E-23 T 11-10-2018 TF3313_1171 7d72464478ec8cc6ed35245324bfa6e5 1358 Pfam PF00072 Response regulator receiver domain 1098 1208 1.6E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TF3313_1171 7d72464478ec8cc6ed35245324bfa6e5 1358 Gene3D G3DSA:2.60.40.10 656 782 1.0E-30 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_1171 7d72464478ec8cc6ed35245324bfa6e5 1358 SMART SM00448 1096 1208 8.5E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TF3313_1171 7d72464478ec8cc6ed35245324bfa6e5 1358 SUPERFAMILY SSF55874 882 1051 1.31E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TF3313_1171 7d72464478ec8cc6ed35245324bfa6e5 1358 Pfam PF07494 Two component regulator propeller 320 339 0.0046 T 11-10-2018 IPR011110 Two component regulator propeller TF3313_1171 7d72464478ec8cc6ed35245324bfa6e5 1358 SUPERFAMILY SSF63829 179 434 5.69E-23 T 11-10-2018 TF3313_1171 7d72464478ec8cc6ed35245324bfa6e5 1358 SUPERFAMILY SSF46689 1294 1341 8.96E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TF3313_1171 7d72464478ec8cc6ed35245324bfa6e5 1358 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 941 1051 8.5E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TF3313_1171 7d72464478ec8cc6ed35245324bfa6e5 1358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1000 1010 6.6E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_1171 7d72464478ec8cc6ed35245324bfa6e5 1358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1039 1052 6.6E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_1171 7d72464478ec8cc6ed35245324bfa6e5 1358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1014 1032 6.6E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_1171 7d72464478ec8cc6ed35245324bfa6e5 1358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 982 996 6.6E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_1171 7d72464478ec8cc6ed35245324bfa6e5 1358 Pfam PF12833 Helix-turn-helix domain 1265 1340 3.8E-16 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TF3313_2884 160cae42eb6cabf3001e9615b253fe88 366 SUPERFAMILY SSF50998 100 360 4.71E-12 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily TF3313_2884 160cae42eb6cabf3001e9615b253fe88 366 Gene3D G3DSA:2.130.10.10 48 366 2.8E-61 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TF3313_1806 70f3d4414cf01705ab1bedc0f1c20d2b 455 Pfam PF01420 Type I restriction modification DNA specificity domain 302 449 5.7E-6 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 TF3313_1806 70f3d4414cf01705ab1bedc0f1c20d2b 455 Pfam PF01420 Type I restriction modification DNA specificity domain 72 249 2.4E-9 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 TF3313_1806 70f3d4414cf01705ab1bedc0f1c20d2b 455 SUPERFAMILY SSF116734 67 277 1.64E-25 T 11-10-2018 TF3313_1806 70f3d4414cf01705ab1bedc0f1c20d2b 455 SUPERFAMILY SSF116734 296 453 1.96E-13 T 11-10-2018 TF3313_1806 70f3d4414cf01705ab1bedc0f1c20d2b 455 Gene3D G3DSA:3.90.220.20 51 268 1.1E-27 T 11-10-2018 TF3313_1806 70f3d4414cf01705ab1bedc0f1c20d2b 455 Gene3D G3DSA:3.90.220.20 283 455 3.0E-10 T 11-10-2018 TF3313_1672 ae49fb58613a2228c5e71a261c65b10d 253 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TF3313_1672 ae49fb58613a2228c5e71a261c65b10d 253 SUPERFAMILY SSF52540 5 229 6.79E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1672 ae49fb58613a2228c5e71a261c65b10d 253 SMART SM00382 32 215 7.8E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_1672 ae49fb58613a2228c5e71a261c65b10d 253 Pfam PF00005 ABC transporter 24 166 3.1E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TF3313_1672 ae49fb58613a2228c5e71a261c65b10d 253 Gene3D G3DSA:3.40.50.300 2 245 4.1E-69 T 11-10-2018 TF3313_1619 7978cb673f81a9b155066bc8def7dcf2 159 Gene3D G3DSA:3.30.70.560 8 159 1.4E-51 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 TF3313_1619 7978cb673f81a9b155066bc8def7dcf2 159 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 11 141 3.6E-37 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 TF3313_1619 7978cb673f81a9b155066bc8def7dcf2 159 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 12 141 1.4E-35 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 TF3313_1619 7978cb673f81a9b155066bc8def7dcf2 159 SUPERFAMILY SSF55083 9 158 1.57E-48 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 TF3313_2919 afb777f185709175100d97a7a6a0b4cd 171 SUPERFAMILY SSF56784 7 163 9.95E-34 T 11-10-2018 IPR036412 HAD-like superfamily TF3313_2919 afb777f185709175100d97a7a6a0b4cd 171 Pfam PF08282 haloacid dehalogenase-like hydrolase 85 151 9.8E-8 T 11-10-2018 TF3313_2919 afb777f185709175100d97a7a6a0b4cd 171 Gene3D G3DSA:3.40.50.1000 2 171 1.9E-47 T 11-10-2018 IPR023214 HAD superfamily TF3313_2919 afb777f185709175100d97a7a6a0b4cd 171 PIRSF PIRSF006118 1 169 1.9E-51 T 11-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 TF3313_2919 afb777f185709175100d97a7a6a0b4cd 171 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 10 160 3.6E-37 T 11-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 TF3313_0695 010ae364c2ddf9c48f4e36c6021f9954 117 Pfam PF05036 Sporulation related domain 40 104 4.0E-8 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 TF3313_0695 010ae364c2ddf9c48f4e36c6021f9954 117 Gene3D G3DSA:3.30.70.1070 41 109 1.9E-9 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 TF3313_0695 010ae364c2ddf9c48f4e36c6021f9954 117 SUPERFAMILY SSF110997 41 111 2.35E-10 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 TF3313_1280 42b845423ef23d1ba744b2e8558b9c1c 198 Gene3D G3DSA:1.10.1740.10 1 115 4.2E-19 T 11-10-2018 TF3313_1280 42b845423ef23d1ba744b2e8558b9c1c 198 SUPERFAMILY SSF88659 122 184 4.36E-12 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TF3313_1280 42b845423ef23d1ba744b2e8558b9c1c 198 Pfam PF04542 Sigma-70 region 2 21 85 1.1E-11 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_1280 42b845423ef23d1ba744b2e8558b9c1c 198 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 182 5.2E-23 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TF3313_1280 42b845423ef23d1ba744b2e8558b9c1c 198 Pfam PF08281 Sigma-70, region 4 128 176 1.1E-12 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TF3313_1280 42b845423ef23d1ba744b2e8558b9c1c 198 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 17 182 2.0E-49 T 11-10-2018 IPR014327 RNA polymerase sigma-70, Bacteroidetes type TF3313_1280 42b845423ef23d1ba744b2e8558b9c1c 198 SUPERFAMILY SSF88946 1 93 2.94E-21 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_1280 42b845423ef23d1ba744b2e8558b9c1c 198 Gene3D G3DSA:1.10.10.10 120 186 1.6E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_2680 777ca7fe293a67cde4b17c33d44e3351 140 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 5 134 4.4E-24 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 TF3313_2680 777ca7fe293a67cde4b17c33d44e3351 140 SMART SM00732 2 100 6.1E-17 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 TF3313_2680 777ca7fe293a67cde4b17c33d44e3351 140 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 2 137 22.421 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 TF3313_2680 777ca7fe293a67cde4b17c33d44e3351 140 SUPERFAMILY SSF53098 1 137 8.35E-35 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TF3313_2680 777ca7fe293a67cde4b17c33d44e3351 140 Gene3D G3DSA:3.30.420.140 1 140 8.4E-39 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 TF3313_2680 777ca7fe293a67cde4b17c33d44e3351 140 Pfam PF03652 Holliday junction resolvase 3 134 7.4E-38 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 TF3313_2077 313083c17e4cf8d20ebdd50ad52d2fbc 376 Gene3D G3DSA:3.20.20.105 1 374 2.9E-149 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 TF3313_2077 313083c17e4cf8d20ebdd50ad52d2fbc 376 SUPERFAMILY SSF51713 1 369 1.96E-144 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 TF3313_2077 313083c17e4cf8d20ebdd50ad52d2fbc 376 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 371 50.792 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 TF3313_2077 313083c17e4cf8d20ebdd50ad52d2fbc 376 Pfam PF01702 Queuine tRNA-ribosyltransferase 130 366 4.6E-78 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 TF3313_2077 313083c17e4cf8d20ebdd50ad52d2fbc 376 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 4 368 9.2E-142 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 TF3313_2077 313083c17e4cf8d20ebdd50ad52d2fbc 376 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 367 2.0E-134 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 TF3313_0630 f49d255cbec6174ed5fbe142775aca69 1059 Pfam PF17132 alpha-L-rhamnosidase 78 800 5.6E-183 T 11-10-2018 IPR033400 Alpha-L-rhamnosidase RhaM TF3313_0630 f49d255cbec6174ed5fbe142775aca69 1059 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 894 1017 3.8E-7 T 11-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 TF3313_0630 f49d255cbec6174ed5fbe142775aca69 1059 Gene3D G3DSA:2.60.120.260 890 1055 3.2E-19 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_0630 f49d255cbec6174ed5fbe142775aca69 1059 SUPERFAMILY SSF49785 896 1055 3.4E-21 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_2376 ff03d709b712d48040a3bba35cfee1fe 280 Gene3D G3DSA:1.10.3810.10 44 224 2.5E-52 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TF3313_2376 ff03d709b712d48040a3bba35cfee1fe 280 Pfam PF00912 Transglycosylase 50 216 9.9E-50 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TF3313_2376 ff03d709b712d48040a3bba35cfee1fe 280 SUPERFAMILY SSF53955 50 223 5.06E-57 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily TF3313_2376 ff03d709b712d48040a3bba35cfee1fe 280 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 14 220 3.2E-72 T 11-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TF3313_2376 ff03d709b712d48040a3bba35cfee1fe 280 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 6 222 38.133 T 11-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TF3313_0433 7de08db437158f229134ed4e2e10af5a 212 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 11 178 2.8E-40 T 11-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TF3313_0433 7de08db437158f229134ed4e2e10af5a 212 Pfam PF00156 Phosphoribosyl transferase domain 57 162 2.3E-17 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 TF3313_0433 7de08db437158f229134ed4e2e10af5a 212 SUPERFAMILY SSF53271 10 209 3.93E-55 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like TF3313_0433 7de08db437158f229134ed4e2e10af5a 212 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 212 27.544 T 11-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TF3313_0433 7de08db437158f229134ed4e2e10af5a 212 Gene3D G3DSA:3.40.50.2020 1 212 2.3E-59 T 11-10-2018 TF3313_0770 039b232cfd016d47de8c71d583200d79 370 SUPERFAMILY SSF47781 7 59 3.06E-9 T 11-10-2018 IPR010994 RuvA domain 2-like TF3313_0770 039b232cfd016d47de8c71d583200d79 370 SMART SM00278 9 28 180.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 TF3313_0770 039b232cfd016d47de8c71d583200d79 370 SMART SM00278 41 60 3.5 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 TF3313_0770 039b232cfd016d47de8c71d583200d79 370 Pfam PF02481 DNA recombination-mediator protein A 75 284 1.5E-72 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 TF3313_0770 039b232cfd016d47de8c71d583200d79 370 SUPERFAMILY SSF102405 85 281 2.38E-29 T 11-10-2018 TF3313_0770 039b232cfd016d47de8c71d583200d79 370 Gene3D G3DSA:3.40.50.450 1 294 1.8E-91 T 11-10-2018 TF3313_0770 039b232cfd016d47de8c71d583200d79 370 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 74 291 1.5E-65 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 TF3313_0770 039b232cfd016d47de8c71d583200d79 370 Pfam PF14520 Helix-hairpin-helix domain 10 57 4.2E-8 T 11-10-2018 TF3313_0023 55e03015f4287503e8e246fe6055476e 424 Pfam PF00326 Prolyl oligopeptidase family 163 238 2.2E-9 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 TF3313_0023 55e03015f4287503e8e246fe6055476e 424 Gene3D G3DSA:1.10.260.160 267 356 1.1E-35 T 11-10-2018 TF3313_0023 55e03015f4287503e8e246fe6055476e 424 SUPERFAMILY SSF53474 160 406 6.69E-20 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TF3313_0023 55e03015f4287503e8e246fe6055476e 424 Gene3D G3DSA:3.40.50.1820 87 387 1.1E-35 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TF3313_0847 b760ce0b6cde5943e9e6be0b5b92e6f5 230 Gene3D G3DSA:3.40.50.1220 4 206 2.8E-65 T 11-10-2018 TF3313_0847 b760ce0b6cde5943e9e6be0b5b92e6f5 230 Gene3D G3DSA:3.30.1600.10 18 151 2.8E-65 T 11-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily TF3313_0847 b760ce0b6cde5943e9e6be0b5b92e6f5 230 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 2 228 52.4 T 11-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 TF3313_0847 b760ce0b6cde5943e9e6be0b5b92e6f5 230 SUPERFAMILY SSF52467 2 226 9.49E-68 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily TF3313_0847 b760ce0b6cde5943e9e6be0b5b92e6f5 230 Pfam PF02146 Sir2 family 9 179 7.8E-46 T 11-10-2018 IPR003000 Sirtuin family GO:0070403 TF3313_1674 34fa5940c9d5e93031edd6d05cbdc1ba 400 Gene3D G3DSA:1.10.3860.10 1 397 1.2E-47 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 TF3313_1674 34fa5940c9d5e93031edd6d05cbdc1ba 400 SUPERFAMILY SSF118215 9 384 1.57E-74 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 TF3313_1674 34fa5940c9d5e93031edd6d05cbdc1ba 400 Pfam PF00375 Sodium:dicarboxylate symporter family 9 384 6.3E-73 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 TF3313_2432 a8055434e416b41ef564496a01013f0d 606 Pfam PF01890 Cobalamin synthesis G C-terminus 228 350 2.2E-28 T 11-10-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 TF3313_2432 a8055434e416b41ef564496a01013f0d 606 SUPERFAMILY SSF159664 221 351 5.36E-31 T 11-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 TF3313_2432 a8055434e416b41ef564496a01013f0d 606 Gene3D G3DSA:3.30.950.10 469 588 9.7E-44 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 TF3313_2432 a8055434e416b41ef564496a01013f0d 606 Gene3D G3DSA:3.30.420.180 218 355 5.2E-29 T 11-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 TF3313_2432 a8055434e416b41ef564496a01013f0d 606 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 363 566 5.9E-40 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 TF3313_2432 a8055434e416b41ef564496a01013f0d 606 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 434 467 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TF3313_2432 a8055434e416b41ef564496a01013f0d 606 Gene3D G3DSA:3.40.50.11220 1 124 2.2E-29 T 11-10-2018 TF3313_2432 a8055434e416b41ef564496a01013f0d 606 Pfam PF11760 Cobalamin synthesis G N-terminal 50 129 1.1E-31 T 11-10-2018 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 TF3313_2432 a8055434e416b41ef564496a01013f0d 606 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 361 605 9.1E-102 T 11-10-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 TF3313_2432 a8055434e416b41ef564496a01013f0d 606 Gene3D G3DSA:3.40.1010.10 357 468 8.1E-24 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 TF3313_2432 a8055434e416b41ef564496a01013f0d 606 SUPERFAMILY SSF159672 4 235 2.75E-54 T 11-10-2018 IPR038029 GbiG N-terminal domain superfamily KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 TF3313_2432 a8055434e416b41ef564496a01013f0d 606 Pfam PF11761 Cobalamin biosynthesis central region 134 225 1.4E-19 T 11-10-2018 IPR021745 Cobalamin biosynthesis central region KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 TF3313_2432 a8055434e416b41ef564496a01013f0d 606 SUPERFAMILY SSF53790 358 605 4.84E-63 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 TF3313_1785 c8251ec263734c2bfc9326248b2bd28d 148 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 140 3.5E-61 T 11-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1785 c8251ec263734c2bfc9326248b2bd28d 148 SUPERFAMILY SSF46906 67 139 4.97E-23 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily TF3313_1785 c8251ec263734c2bfc9326248b2bd28d 148 SUPERFAMILY SSF54747 3 72 3.53E-28 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily TF3313_1785 c8251ec263734c2bfc9326248b2bd28d 148 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 1.9E-27 T 11-10-2018 IPR020784 Ribosomal protein L11, N-terminal TF3313_1785 c8251ec263734c2bfc9326248b2bd28d 148 Gene3D G3DSA:3.30.1550.10 2 71 2.0E-32 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily TF3313_1785 c8251ec263734c2bfc9326248b2bd28d 148 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 6.2E-20 T 11-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 TF3313_1785 c8251ec263734c2bfc9326248b2bd28d 148 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 28.887 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 TF3313_1785 c8251ec263734c2bfc9326248b2bd28d 148 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 141 - T 11-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1785 c8251ec263734c2bfc9326248b2bd28d 148 Gene3D G3DSA:1.10.10.250 72 140 4.8E-22 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily TF3313_1785 c8251ec263734c2bfc9326248b2bd28d 148 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 1.0E-15 T 11-10-2018 TF3313_1785 c8251ec263734c2bfc9326248b2bd28d 148 SMART SM00649 9 140 1.4E-69 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 TF3313_0363 fdbaf0e1f53a219233a369ee6bd4fcbb 197 Pfam PF08281 Sigma-70, region 4 134 171 3.1E-11 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TF3313_0363 fdbaf0e1f53a219233a369ee6bd4fcbb 197 SUPERFAMILY SSF88946 1 108 1.29E-25 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_0363 fdbaf0e1f53a219233a369ee6bd4fcbb 197 SUPERFAMILY SSF88659 135 189 8.6E-15 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TF3313_0363 fdbaf0e1f53a219233a369ee6bd4fcbb 197 Pfam PF04542 Sigma-70 region 2 27 96 3.5E-16 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_0363 fdbaf0e1f53a219233a369ee6bd4fcbb 197 Gene3D G3DSA:1.10.10.10 119 190 1.0E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_0363 fdbaf0e1f53a219233a369ee6bd4fcbb 197 Gene3D G3DSA:1.10.1740.10 2 118 1.5E-24 T 11-10-2018 TF3313_0363 fdbaf0e1f53a219233a369ee6bd4fcbb 197 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 185 5.2E-28 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TF3313_0324 532ce9c3350a8481e0e8cb8f28945670 148 Gene3D G3DSA:3.30.70.1290 8 135 7.6E-20 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 TF3313_0324 532ce9c3350a8481e0e8cb8f28945670 148 SUPERFAMILY SSF143422 2 120 6.15E-25 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 TF3313_0324 532ce9c3350a8481e0e8cb8f28945670 148 SMART SM01321 5 119 2.7E-7 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 TF3313_0324 532ce9c3350a8481e0e8cb8f28945670 148 Pfam PF01797 Transposase IS200 like 7 119 6.4E-21 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 TF3313_2890 baa52968ec1fdbe0e572f13935f4c12f 336 Gene3D G3DSA:3.40.50.20 18 321 1.1E-86 T 11-10-2018 TF3313_2890 baa52968ec1fdbe0e572f13935f4c12f 336 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 324 32.097 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TF3313_2890 baa52968ec1fdbe0e572f13935f4c12f 336 Gene3D G3DSA:3.30.1490.20 132 197 1.1E-86 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TF3313_2890 baa52968ec1fdbe0e572f13935f4c12f 336 SUPERFAMILY SSF56059 116 322 8.84E-47 T 11-10-2018 TF3313_2890 baa52968ec1fdbe0e572f13935f4c12f 336 SUPERFAMILY SSF52440 1 115 3.17E-28 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TF3313_2890 baa52968ec1fdbe0e572f13935f4c12f 336 Gene3D G3DSA:3.30.470.20 105 314 1.1E-86 T 11-10-2018 TF3313_2890 baa52968ec1fdbe0e572f13935f4c12f 336 PIRSF PIRSF039102 1 331 9.9E-91 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TF3313_2890 baa52968ec1fdbe0e572f13935f4c12f 336 Pfam PF01820 D-ala D-ala ligase N-terminus 5 106 3.8E-20 T 11-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TF3313_2890 baa52968ec1fdbe0e572f13935f4c12f 336 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 83 94 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TF3313_2890 baa52968ec1fdbe0e572f13935f4c12f 336 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 322 5.1E-79 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TF3313_2890 baa52968ec1fdbe0e572f13935f4c12f 336 Pfam PF07478 D-ala D-ala ligase C-terminus 145 321 2.6E-48 T 11-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TF3313_0345 40d7fb74e055a3999a2ca8678dfa7856 736 Gene3D G3DSA:3.30.10.20 680 736 4.8E-7 T 11-10-2018 TF3313_0345 40d7fb74e055a3999a2ca8678dfa7856 736 Gene3D G3DSA:3.40.710.10 321 521 3.7E-91 T 11-10-2018 TF3313_0345 40d7fb74e055a3999a2ca8678dfa7856 736 Gene3D G3DSA:3.90.1310.30 61 264 3.4E-20 T 11-10-2018 TF3313_0345 40d7fb74e055a3999a2ca8678dfa7856 736 Pfam PF00905 Penicillin binding protein transpeptidase domain 290 604 3.4E-51 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 TF3313_0345 40d7fb74e055a3999a2ca8678dfa7856 736 Pfam PF03793 PASTA domain 683 734 1.3E-10 T 11-10-2018 IPR005543 PASTA domain TF3313_0345 40d7fb74e055a3999a2ca8678dfa7856 736 SMART SM00740 677 736 4.6E-7 T 11-10-2018 IPR005543 PASTA domain TF3313_0345 40d7fb74e055a3999a2ca8678dfa7856 736 Pfam PF03717 Penicillin-binding Protein dimerisation domain 67 243 9.5E-16 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 TF3313_0345 40d7fb74e055a3999a2ca8678dfa7856 736 Gene3D G3DSA:3.30.450.330 266 607 3.7E-91 T 11-10-2018 TF3313_0345 40d7fb74e055a3999a2ca8678dfa7856 736 SUPERFAMILY SSF54184 682 735 2.22E-9 T 11-10-2018 TF3313_0345 40d7fb74e055a3999a2ca8678dfa7856 736 SUPERFAMILY SSF56601 220 610 2.82E-73 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TF3313_0345 40d7fb74e055a3999a2ca8678dfa7856 736 SUPERFAMILY SSF56519 65 263 3.53E-16 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 TF3313_2294 90da5a2cb932e1419f86bfa151fa95e6 238 Gene3D G3DSA:1.10.287.460 23 131 1.9E-21 T 11-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 TF3313_2294 90da5a2cb932e1419f86bfa151fa95e6 238 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 146 233 3.4E-28 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain TF3313_2294 90da5a2cb932e1419f86bfa151fa95e6 238 SUPERFAMILY SSF54534 47 237 2.36E-54 T 11-10-2018 TF3313_2294 90da5a2cb932e1419f86bfa151fa95e6 238 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 25 138 5.0E-23 T 11-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 TF3313_2294 90da5a2cb932e1419f86bfa151fa95e6 238 Gene3D G3DSA:3.10.50.40 133 238 1.2E-42 T 11-10-2018 TF3313_2365 3c669a8ea246a9616de2e4b4b4ad45bf 519 Pfam PF02652 L-lactate permease 1 517 1.5E-113 T 11-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 TF3313_2365 3c669a8ea246a9616de2e4b4b4ad45bf 519 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 1 518 2.4E-108 T 11-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 TF3313_1536 1cd7ba827d5df14c380b9f8c862ffb15 280 PIRSF PIRSF001500 1 278 3.2E-57 T 11-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 TF3313_1536 1cd7ba827d5df14c380b9f8c862ffb15 280 Gene3D G3DSA:3.40.190.10 85 170 4.0E-48 T 11-10-2018 TF3313_1536 1cd7ba827d5df14c380b9f8c862ffb15 280 Gene3D G3DSA:3.40.190.10 4 177 4.0E-48 T 11-10-2018 TF3313_1536 1cd7ba827d5df14c380b9f8c862ffb15 280 Pfam PF00800 Prephenate dehydratase 4 182 5.5E-50 T 11-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 TF3313_1536 1cd7ba827d5df14c380b9f8c862ffb15 280 Gene3D G3DSA:3.30.70.260 190 276 6.2E-20 T 11-10-2018 TF3313_1536 1cd7ba827d5df14c380b9f8c862ffb15 280 SUPERFAMILY SSF53850 3 184 8.58E-50 T 11-10-2018 TF3313_1536 1cd7ba827d5df14c380b9f8c862ffb15 280 SUPERFAMILY SSF55021 195 273 7.5E-19 T 11-10-2018 TF3313_1828 99aef96e754aa34469bab8f784190ddd 270 Gene3D G3DSA:3.40.50.150 19 220 7.6E-35 T 11-10-2018 TF3313_1828 99aef96e754aa34469bab8f784190ddd 270 Pfam PF13489 Methyltransferase domain 18 171 3.4E-16 T 11-10-2018 TF3313_1828 99aef96e754aa34469bab8f784190ddd 270 SUPERFAMILY SSF53335 16 192 1.99E-27 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_1368 a5ed78f88f59f778eceb3f0684fd9912 532 Pfam PF13616 PPIC-type PPIASE domain 232 338 1.0E-23 T 11-10-2018 TF3313_1368 a5ed78f88f59f778eceb3f0684fd9912 532 SUPERFAMILY SSF54534 125 229 4.25E-14 T 11-10-2018 TF3313_1368 a5ed78f88f59f778eceb3f0684fd9912 532 SUPERFAMILY SSF54534 232 339 1.77E-24 T 11-10-2018 TF3313_1368 a5ed78f88f59f778eceb3f0684fd9912 532 Gene3D G3DSA:3.10.50.40 231 358 5.3E-29 T 11-10-2018 TF3313_1368 a5ed78f88f59f778eceb3f0684fd9912 532 Gene3D G3DSA:3.10.50.40 119 230 3.9E-21 T 11-10-2018 TF3313_1368 a5ed78f88f59f778eceb3f0684fd9912 532 Pfam PF00639 PPIC-type PPIASE domain 131 226 3.9E-12 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 TF3313_2529 f39ce160a7012c1a3145eb0db0291e42 331 SUPERFAMILY SSF52540 30 308 1.81E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2529 f39ce160a7012c1a3145eb0db0291e42 331 Gene3D G3DSA:3.40.50.300 32 198 1.1E-44 T 11-10-2018 TF3313_2529 f39ce160a7012c1a3145eb0db0291e42 331 Gene3D G3DSA:1.10.8.300 211 328 3.6E-37 T 11-10-2018 TF3313_2529 f39ce160a7012c1a3145eb0db0291e42 331 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 51 181 2.1E-66 T 11-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 TF3313_2529 f39ce160a7012c1a3145eb0db0291e42 331 PIRSF PIRSF002849 2 331 6.3E-132 T 11-10-2018 TF3313_1360 343ead16aeeeae1bd2339c9112ccd676 335 Gene3D G3DSA:3.40.50.620 5 204 4.1E-79 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_1360 343ead16aeeeae1bd2339c9112ccd676 335 Pfam PF01012 Electron transfer flavoprotein domain 10 185 1.3E-50 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 TF3313_1360 343ead16aeeeae1bd2339c9112ccd676 335 Gene3D G3DSA:3.40.50.1220 205 335 5.0E-53 T 11-10-2018 TF3313_1360 343ead16aeeeae1bd2339c9112ccd676 335 SUPERFAMILY SSF52467 208 328 3.41E-44 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily TF3313_1360 343ead16aeeeae1bd2339c9112ccd676 335 PIRSF PIRSF000089 5 333 8.9E-118 T 11-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 TF3313_1360 343ead16aeeeae1bd2339c9112ccd676 335 SMART SM00893 9 197 1.5E-53 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 TF3313_1360 343ead16aeeeae1bd2339c9112ccd676 335 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 208 291 1.9E-34 T 11-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 TF3313_1360 343ead16aeeeae1bd2339c9112ccd676 335 SUPERFAMILY SSF52402 7 195 3.91E-58 T 11-10-2018 TF3313_1156 62e4596fbbbda8dc27e332600f0e0ce2 435 Pfam PF02321 Outer membrane efflux protein 27 214 4.5E-27 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TF3313_1156 62e4596fbbbda8dc27e332600f0e0ce2 435 Pfam PF02321 Outer membrane efflux protein 251 421 1.8E-24 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TF3313_1156 62e4596fbbbda8dc27e332600f0e0ce2 435 Gene3D G3DSA:1.20.1600.10 24 432 3.7E-75 T 11-10-2018 TF3313_1156 62e4596fbbbda8dc27e332600f0e0ce2 435 SUPERFAMILY SSF56954 3 425 1.07E-66 T 11-10-2018 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 Gene3D G3DSA:1.25.40.10 727 800 2.1E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 Gene3D G3DSA:1.25.40.10 26 141 1.5E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 SUPERFAMILY SSF48452 174 340 2.05E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 SMART SM00028 505 538 0.021 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 SMART SM00028 279 312 0.24 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 SMART SM00028 766 799 290.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 SMART SM00028 653 686 120.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 SMART SM00028 428 461 21.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 SMART SM00028 207 240 170.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 SMART SM00028 616 649 0.61 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 SMART SM00028 877 909 180.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 SMART SM00028 802 835 130.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 SMART SM00028 913 946 160.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 SMART SM00028 244 277 11.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 SMART SM00028 544 577 0.0014 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 SMART SM00028 138 171 330.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 SMART SM00028 466 499 110.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 SMART SM00028 314 347 420.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 Gene3D G3DSA:1.25.40.10 422 582 2.4E-25 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 Pfam PF13174 Tetratricopeptide repeat 66 97 0.0044 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 Pfam PF13174 Tetratricopeptide repeat 316 340 0.04 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 Pfam PF13174 Tetratricopeptide repeat 580 612 0.051 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 Pfam PF13432 Tetratricopeptide repeat 433 499 1.8E-4 T 11-10-2018 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 Pfam PF13432 Tetratricopeptide repeat 509 576 2.9E-9 T 11-10-2018 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 Pfam PF13432 Tetratricopeptide repeat 742 793 5.1E-6 T 11-10-2018 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 Pfam PF13525 Outer membrane lipoprotein 618 692 1.1E-7 T 11-10-2018 IPR039565 Outer membrane lipoprotein BamD-like TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 Pfam PF12895 Anaphase-promoting complex, cyclosome, subunit 3 222 304 1.3E-7 T 11-10-2018 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 SUPERFAMILY SSF48452 102 199 2.4E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 SUPERFAMILY SSF48452 430 685 9.67E-25 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 Gene3D G3DSA:1.25.40.10 368 421 3.8E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 Gene3D G3DSA:1.25.40.10 173 274 6.7E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 Gene3D G3DSA:1.25.40.10 905 999 6.1E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 Gene3D G3DSA:1.25.40.10 807 904 3.6E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 Gene3D G3DSA:1.25.40.10 583 700 7.6E-25 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 SUPERFAMILY SSF48452 315 416 3.6E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 SUPERFAMILY SSF48452 615 797 6.17E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 SUPERFAMILY SSF48452 808 941 8.22E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1053 b6a40b45b0d152356cfb68ae5ab0cb2f 999 Gene3D G3DSA:1.25.40.10 275 367 6.1E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2692 006452c7d7f85de77e877fcf7069bd48 426 Gene3D G3DSA:3.90.1150.10 292 426 5.5E-47 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TF3313_2692 006452c7d7f85de77e877fcf7069bd48 426 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 424 7.7E-127 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TF3313_2692 006452c7d7f85de77e877fcf7069bd48 426 SUPERFAMILY SSF53383 8 424 6.19E-113 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TF3313_2692 006452c7d7f85de77e877fcf7069bd48 426 PIRSF PIRSF001434 1 426 1.7E-124 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TF3313_2692 006452c7d7f85de77e877fcf7069bd48 426 Gene3D G3DSA:3.40.640.10 5 288 7.1E-94 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TF3313_2692 006452c7d7f85de77e877fcf7069bd48 426 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 7 424 7.1E-176 T 11-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 TF3313_1397 7ea0dd7a3c8e9505b6ccfa9d39b773e3 453 SUPERFAMILY SSF52954 362 452 7.25E-23 T 11-10-2018 TF3313_1397 7ea0dd7a3c8e9505b6ccfa9d39b773e3 453 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 451 26.424 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 TF3313_1397 7ea0dd7a3c8e9505b6ccfa9d39b773e3 453 Pfam PF13393 Histidyl-tRNA synthetase 10 70 1.7E-6 T 11-10-2018 TF3313_1397 7ea0dd7a3c8e9505b6ccfa9d39b773e3 453 Pfam PF13393 Histidyl-tRNA synthetase 98 345 2.2E-27 T 11-10-2018 TF3313_1397 7ea0dd7a3c8e9505b6ccfa9d39b773e3 453 Gene3D G3DSA:3.40.50.800 361 453 5.4E-27 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily TF3313_1397 7ea0dd7a3c8e9505b6ccfa9d39b773e3 453 PIRSF PIRSF001549 1 453 4.6E-134 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 TF3313_1397 7ea0dd7a3c8e9505b6ccfa9d39b773e3 453 Gene3D G3DSA:3.30.930.10 2 356 8.6E-108 T 11-10-2018 TF3313_1397 7ea0dd7a3c8e9505b6ccfa9d39b773e3 453 SUPERFAMILY SSF55681 6 353 1.99E-70 T 11-10-2018 TF3313_1397 7ea0dd7a3c8e9505b6ccfa9d39b773e3 453 Pfam PF03129 Anticodon binding domain 365 453 6.0E-16 T 11-10-2018 IPR004154 Anticodon-binding TF3313_1397 7ea0dd7a3c8e9505b6ccfa9d39b773e3 453 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 7 443 3.0E-123 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 TF3313_1439 a8f43587737645e9641669bf35e22ec5 159 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 1.9E-39 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1439 a8f43587737645e9641669bf35e22ec5 159 Pfam PF01196 Ribosomal protein L17 20 116 3.1E-31 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1439 a8f43587737645e9641669bf35e22ec5 159 SUPERFAMILY SSF64263 1 118 1.24E-43 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1439 a8f43587737645e9641669bf35e22ec5 159 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 23.937 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1439 a8f43587737645e9641669bf35e22ec5 159 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1439 a8f43587737645e9641669bf35e22ec5 159 Gene3D G3DSA:3.90.1030.10 1 117 2.2E-43 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2685 c1be02c22b12200367c0c3fba1e8fe42 302 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 273 281 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TF3313_2685 c1be02c22b12200367c0c3fba1e8fe42 302 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 79 104 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TF3313_2685 c1be02c22b12200367c0c3fba1e8fe42 302 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 8 124 2.0E-39 T 11-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TF3313_2685 c1be02c22b12200367c0c3fba1e8fe42 302 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 127 293 2.3E-65 T 11-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TF3313_2685 c1be02c22b12200367c0c3fba1e8fe42 302 Gene3D G3DSA:3.40.50.10860 11 289 5.4E-107 T 11-10-2018 TF3313_2685 c1be02c22b12200367c0c3fba1e8fe42 302 Hamap MF_01576 Bifunctional protein FolD [folD]. 6 296 36.478 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TF3313_2685 c1be02c22b12200367c0c3fba1e8fe42 302 SUPERFAMILY SSF53223 6 125 2.59E-38 T 11-10-2018 TF3313_2685 c1be02c22b12200367c0c3fba1e8fe42 302 SUPERFAMILY SSF51735 126 291 9.67E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_2685 c1be02c22b12200367c0c3fba1e8fe42 302 Gene3D G3DSA:3.40.50.720 9 272 5.4E-107 T 11-10-2018 TF3313_2685 c1be02c22b12200367c0c3fba1e8fe42 302 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 113 134 1.9E-79 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TF3313_2685 c1be02c22b12200367c0c3fba1e8fe42 302 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 37 59 1.9E-79 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TF3313_2685 c1be02c22b12200367c0c3fba1e8fe42 302 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 211 240 1.9E-79 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TF3313_2685 c1be02c22b12200367c0c3fba1e8fe42 302 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 269 287 1.9E-79 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TF3313_2685 c1be02c22b12200367c0c3fba1e8fe42 302 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 78 105 1.9E-79 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TF3313_2685 c1be02c22b12200367c0c3fba1e8fe42 302 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 252 268 1.9E-79 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TF3313_2685 c1be02c22b12200367c0c3fba1e8fe42 302 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 158 178 1.9E-79 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TF3313_0698 82e1b1bd0bfc6924af8f1752c1c5e805 418 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 40 150 3.4E-20 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 TF3313_0698 82e1b1bd0bfc6924af8f1752c1c5e805 418 SUPERFAMILY SSF55347 171 329 5.23E-13 T 11-10-2018 TF3313_0698 82e1b1bd0bfc6924af8f1752c1c5e805 418 SUPERFAMILY SSF51735 30 187 7.99E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_0698 82e1b1bd0bfc6924af8f1752c1c5e805 418 Gene3D G3DSA:3.40.50.720 36 170 1.7E-36 T 11-10-2018 TF3313_0698 82e1b1bd0bfc6924af8f1752c1c5e805 418 Gene3D G3DSA:3.30.360.10 171 395 1.1E-13 T 11-10-2018 TF3313_0989 b06b105c4efe52c9511527c6508ea4d3 245 Gene3D G3DSA:3.40.50.720 1 245 5.4E-63 T 11-10-2018 TF3313_0989 b06b105c4efe52c9511527c6508ea4d3 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 243 1.4E-47 T 11-10-2018 TF3313_0989 b06b105c4efe52c9511527c6508ea4d3 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.8E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_0989 b06b105c4efe52c9511527c6508ea4d3 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 70 81 1.8E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_0989 b06b105c4efe52c9511527c6508ea4d3 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 1.8E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_0989 b06b105c4efe52c9511527c6508ea4d3 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 3.4E-29 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_0989 b06b105c4efe52c9511527c6508ea4d3 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 3.4E-29 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_0989 b06b105c4efe52c9511527c6508ea4d3 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.4E-29 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_0989 b06b105c4efe52c9511527c6508ea4d3 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 70 81 3.4E-29 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_0989 b06b105c4efe52c9511527c6508ea4d3 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.4E-29 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_0989 b06b105c4efe52c9511527c6508ea4d3 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 3.4E-29 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_0989 b06b105c4efe52c9511527c6508ea4d3 245 SUPERFAMILY SSF51735 4 244 1.11E-65 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_2512 cbedc6136d7e2700adf9c293d7c825f1 950 Pfam PF02347 Glycine cleavage system P-protein 472 733 4.5E-6 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 TF3313_2512 cbedc6136d7e2700adf9c293d7c825f1 950 Pfam PF02347 Glycine cleavage system P-protein 8 440 2.7E-170 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 TF3313_2512 cbedc6136d7e2700adf9c293d7c825f1 950 SUPERFAMILY SSF53383 14 440 1.04E-97 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TF3313_2512 cbedc6136d7e2700adf9c293d7c825f1 950 Gene3D G3DSA:3.40.640.10 522 747 6.7E-58 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TF3313_2512 cbedc6136d7e2700adf9c293d7c825f1 950 Gene3D G3DSA:3.40.640.10 89 352 5.4E-101 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TF3313_2512 cbedc6136d7e2700adf9c293d7c825f1 950 Gene3D G3DSA:3.90.1150.10 760 898 1.2E-38 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TF3313_2512 cbedc6136d7e2700adf9c293d7c825f1 950 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 9 949 0.0 T 11-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 TF3313_2512 cbedc6136d7e2700adf9c293d7c825f1 950 SUPERFAMILY SSF53383 480 945 2.04E-88 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TF3313_1624 5a69b2661e23deb0a13a7bdfa887a9ad 416 Gene3D G3DSA:1.20.1250.20 11 206 8.8E-49 T 11-10-2018 TF3313_1624 5a69b2661e23deb0a13a7bdfa887a9ad 416 Gene3D G3DSA:1.20.1250.20 211 414 3.6E-38 T 11-10-2018 TF3313_1624 5a69b2661e23deb0a13a7bdfa887a9ad 416 Pfam PF07690 Major Facilitator Superfamily 21 353 3.2E-23 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TF3313_1624 5a69b2661e23deb0a13a7bdfa887a9ad 416 SUPERFAMILY SSF103473 10 414 3.01E-37 T 11-10-2018 IPR036259 MFS transporter superfamily TF3313_2435 3c1bce907e8300ef6391ee2365bb6842 176 SUPERFAMILY SSF55729 17 135 5.06E-15 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TF3313_2435 3c1bce907e8300ef6391ee2365bb6842 176 Gene3D G3DSA:3.40.630.30 1 155 5.5E-39 T 11-10-2018 TF3313_2435 3c1bce907e8300ef6391ee2365bb6842 176 Pfam PF13508 Acetyltransferase (GNAT) domain 46 126 2.4E-9 T 11-10-2018 IPR000182 GNAT domain TF3313_0547 cfadcf8ba0b51a4107c3496e80be3bef 320 Pfam PF03462 PCRF domain 2 162 8.1E-48 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 TF3313_0547 cfadcf8ba0b51a4107c3496e80be3bef 320 Gene3D G3DSA:3.30.160.20 168 271 2.9E-77 T 11-10-2018 TF3313_0547 cfadcf8ba0b51a4107c3496e80be3bef 320 Pfam PF00472 RF-1 domain 171 287 1.7E-32 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 TF3313_0547 cfadcf8ba0b51a4107c3496e80be3bef 320 SMART SM00937 33 137 7.6E-37 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 TF3313_0547 cfadcf8ba0b51a4107c3496e80be3bef 320 Gene3D G3DSA:3.30.70.1660 72 308 2.9E-77 T 11-10-2018 TF3313_0547 cfadcf8ba0b51a4107c3496e80be3bef 320 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 187 203 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 TF3313_0547 cfadcf8ba0b51a4107c3496e80be3bef 320 SUPERFAMILY SSF75620 3 314 9.29E-102 T 11-10-2018 TF3313_2580 e44546c4d517ca05b1a79c393b09df9c 1150 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 43 54 2.0E-9 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TF3313_2580 e44546c4d517ca05b1a79c393b09df9c 1150 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 657 666 2.0E-9 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TF3313_2580 e44546c4d517ca05b1a79c393b09df9c 1150 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 615 628 2.0E-9 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TF3313_2580 e44546c4d517ca05b1a79c393b09df9c 1150 SUPERFAMILY SSF47323 753 998 4.3E-57 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_2580 e44546c4d517ca05b1a79c393b09df9c 1150 Gene3D G3DSA:1.10.730.10 739 929 2.1E-52 T 11-10-2018 TF3313_2580 e44546c4d517ca05b1a79c393b09df9c 1150 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 19 736 3.6E-157 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_2580 e44546c4d517ca05b1a79c393b09df9c 1150 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 8 948 0.0 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TF3313_2580 e44546c4d517ca05b1a79c393b09df9c 1150 Gene3D G3DSA:3.40.50.620 18 724 9.1E-203 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_2580 e44546c4d517ca05b1a79c393b09df9c 1150 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 6 1145 13.482 T 11-10-2018 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TF3313_2580 e44546c4d517ca05b1a79c393b09df9c 1150 Gene3D G3DSA:3.90.740.10 201 471 9.1E-203 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TF3313_2580 e44546c4d517ca05b1a79c393b09df9c 1150 Pfam PF08264 Anticodon-binding domain of tRNA 785 937 1.3E-30 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 TF3313_2580 e44546c4d517ca05b1a79c393b09df9c 1150 SUPERFAMILY SSF50677 235 400 3.24E-31 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TF3313_2580 e44546c4d517ca05b1a79c393b09df9c 1150 SUPERFAMILY SSF52374 8 747 1.32E-124 T 11-10-2018 TF3313_0289 77113f21eb28a02887551ad734aec30c 259 SUPERFAMILY SSF88713 31 206 3.71E-30 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 TF3313_0289 77113f21eb28a02887551ad734aec30c 259 Gene3D G3DSA:3.20.20.370 2 251 2.6E-34 T 11-10-2018 TF3313_0289 77113f21eb28a02887551ad734aec30c 259 Pfam PF01522 Polysaccharide deacetylase 27 127 2.0E-16 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 TF3313_0289 77113f21eb28a02887551ad734aec30c 259 Pfam PF11959 Domain of unknown function (DUF3473) 129 251 9.0E-9 T 11-10-2018 IPR022560 Domain of unknown function DUF3473 TF3313_1211 850b33aa6e252e250d71852074230955 257 SUPERFAMILY SSF143597 40 241 4.18E-59 T 11-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily TF3313_1211 850b33aa6e252e250d71852074230955 257 Hamap MF_01499 Diadenylate cyclase [dacA]. 2 256 29.062 T 11-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 TF3313_1211 850b33aa6e252e250d71852074230955 257 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 121 238 9.6E-42 T 11-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal TF3313_1211 850b33aa6e252e250d71852074230955 257 PIRSF PIRSF004793 3 256 2.0E-73 T 11-10-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 TF3313_1211 850b33aa6e252e250d71852074230955 257 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 8 251 5.4E-63 T 11-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 TF3313_1211 850b33aa6e252e250d71852074230955 257 Gene3D G3DSA:3.40.1700.10 103 254 6.5E-54 T 11-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily TF3313_2887 d783937eb65be58f64efa5114f069e6c 51 Pfam PF00468 Ribosomal protein L34 1 44 6.3E-24 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2887 d783937eb65be58f64efa5114f069e6c 51 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 11-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_2887 d783937eb65be58f64efa5114f069e6c 51 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.256 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2887 d783937eb65be58f64efa5114f069e6c 51 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 2.0E-14 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2887 d783937eb65be58f64efa5114f069e6c 51 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 1.6E-23 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1973 8e2ffced3ef3553aa807f3de0969c51b 363 Gene3D G3DSA:3.40.50.300 1 327 1.8E-27 T 11-10-2018 TF3313_1973 8e2ffced3ef3553aa807f3de0969c51b 363 SUPERFAMILY SSF52540 2 313 9.86E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1973 8e2ffced3ef3553aa807f3de0969c51b 363 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 22 305 1.0E-29 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TF3313_1973 8e2ffced3ef3553aa807f3de0969c51b 363 PIRSF PIRSF029347 1 95 1.5E-14 T 11-10-2018 IPR014555 RecF-like TF3313_1973 8e2ffced3ef3553aa807f3de0969c51b 363 PIRSF PIRSF029347 89 340 2.4E-27 T 11-10-2018 IPR014555 RecF-like TF3313_0339 e0765779453069df0fcc4773b6050de2 459 SUPERFAMILY SSF51984 7 99 2.22E-20 T 11-10-2018 TF3313_0339 e0765779453069df0fcc4773b6050de2 459 Gene3D G3DSA:3.40.50.720 7 100 1.3E-19 T 11-10-2018 TF3313_0339 e0765779453069df0fcc4773b6050de2 459 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 9 451 4.6E-107 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TF3313_0339 e0765779453069df0fcc4773b6050de2 459 Gene3D G3DSA:3.40.1190.10 101 311 2.0E-52 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TF3313_0339 e0765779453069df0fcc4773b6050de2 459 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 6 458 31.482 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TF3313_0339 e0765779453069df0fcc4773b6050de2 459 Pfam PF08245 Mur ligase middle domain 117 296 2.9E-21 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TF3313_0339 e0765779453069df0fcc4773b6050de2 459 SUPERFAMILY SSF53623 98 313 4.32E-47 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TF3313_0339 e0765779453069df0fcc4773b6050de2 459 SUPERFAMILY SSF53244 315 453 6.96E-35 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TF3313_0339 e0765779453069df0fcc4773b6050de2 459 Gene3D G3DSA:3.90.190.20 312 458 5.1E-43 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TF3313_0339 e0765779453069df0fcc4773b6050de2 459 Pfam PF02875 Mur ligase family, glutamate ligase domain 316 402 8.5E-21 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 TF3313_0339 e0765779453069df0fcc4773b6050de2 459 Pfam PF01225 Mur ligase family, catalytic domain 9 111 4.3E-16 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 TF3313_0865 f18fe6bf7dccff952a6a3f34cd6f9efe 572 Pfam PF00271 Helicase conserved C-terminal domain 227 318 3.0E-26 T 11-10-2018 IPR001650 Helicase, C-terminal TF3313_0865 f18fe6bf7dccff952a6a3f34cd6f9efe 572 SMART SM00487 2 199 3.7E-59 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TF3313_0865 f18fe6bf7dccff952a6a3f34cd6f9efe 572 SUPERFAMILY SSF52540 53 339 5.23E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0865 f18fe6bf7dccff952a6a3f34cd6f9efe 572 Gene3D G3DSA:3.40.50.300 1 188 1.8E-67 T 11-10-2018 TF3313_0865 f18fe6bf7dccff952a6a3f34cd6f9efe 572 Pfam PF03880 DbpA RNA binding domain 450 520 2.8E-17 T 11-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain TF3313_0865 f18fe6bf7dccff952a6a3f34cd6f9efe 572 Gene3D G3DSA:3.30.70.330 449 523 8.3E-8 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily TF3313_0865 f18fe6bf7dccff952a6a3f34cd6f9efe 572 Pfam PF00270 DEAD/DEAH box helicase 8 174 4.1E-49 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TF3313_0865 f18fe6bf7dccff952a6a3f34cd6f9efe 572 SMART SM00490 237 318 7.7E-31 T 11-10-2018 IPR001650 Helicase, C-terminal TF3313_0865 f18fe6bf7dccff952a6a3f34cd6f9efe 572 Gene3D G3DSA:3.40.50.300 193 436 1.6E-47 T 11-10-2018 TF3313_0865 f18fe6bf7dccff952a6a3f34cd6f9efe 572 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 132 140 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site TF3313_0978 158745eac909e67e387c80560c97370e 402 SUPERFAMILY SSF53756 13 398 3.73E-52 T 11-10-2018 TF3313_0978 158745eac909e67e387c80560c97370e 402 Pfam PF00534 Glycosyl transferases group 1 223 374 2.0E-31 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 TF3313_0978 158745eac909e67e387c80560c97370e 402 Gene3D G3DSA:3.40.50.2000 13 391 1.9E-47 T 11-10-2018 TF3313_0978 158745eac909e67e387c80560c97370e 402 Gene3D G3DSA:3.40.50.2000 199 381 1.9E-47 T 11-10-2018 TF3313_0942 b6974140ddc273cd1fdc145ed2fa4305 725 SUPERFAMILY SSF82171 138 469 2.09E-34 T 11-10-2018 TF3313_0942 b6974140ddc273cd1fdc145ed2fa4305 725 Gene3D G3DSA:3.40.50.1820 467 725 1.1E-76 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TF3313_0942 b6974140ddc273cd1fdc145ed2fa4305 725 Gene3D G3DSA:2.140.10.30 18 466 5.5E-131 T 11-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily TF3313_0942 b6974140ddc273cd1fdc145ed2fa4305 725 Pfam PF00326 Prolyl oligopeptidase family 533 725 9.1E-47 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 TF3313_0942 b6974140ddc273cd1fdc145ed2fa4305 725 SUPERFAMILY SSF53474 476 725 6.2E-67 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TF3313_0942 b6974140ddc273cd1fdc145ed2fa4305 725 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 113 442 7.2E-69 T 11-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 TF3313_1375 a241c767e0e54908d4948cb690730615 292 Pfam PF02517 CAAX protease self-immunity 154 240 2.1E-15 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 TF3313_1437 00fb15b4df12c24de8317863254dd611 201 Gene3D G3DSA:1.10.1050.10 6 201 2.2E-78 T 11-10-2018 TF3313_1437 00fb15b4df12c24de8317863254dd611 201 SUPERFAMILY SSF55174 2 201 2.36E-66 T 11-10-2018 TF3313_1437 00fb15b4df12c24de8317863254dd611 201 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 201 35.791 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 TF3313_1437 00fb15b4df12c24de8317863254dd611 201 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 91 1.2E-31 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 TF3313_1437 00fb15b4df12c24de8317863254dd611 201 Gene3D G3DSA:3.10.290.10 91 186 2.2E-78 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TF3313_1437 00fb15b4df12c24de8317863254dd611 201 Pfam PF01479 S4 domain 93 139 3.3E-18 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1437 00fb15b4df12c24de8317863254dd611 201 SMART SM00363 92 156 3.9E-18 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1437 00fb15b4df12c24de8317863254dd611 201 SMART SM01390 3 91 4.0E-49 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 TF3313_1437 00fb15b4df12c24de8317863254dd611 201 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 201 6.6E-80 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 TF3313_1437 00fb15b4df12c24de8317863254dd611 201 ProSitePatterns PS00632 Ribosomal protein S4 signature. 90 114 - T 11-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_2551 3bb770c75596d1be78f737e92cb4d30f 358 Pfam PF00633 Helix-hairpin-helix motif 102 131 1.8E-6 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 TF3313_2551 3bb770c75596d1be78f737e92cb4d30f 358 SMART SM00478 42 193 6.1E-37 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 TF3313_2551 3bb770c75596d1be78f737e92cb4d30f 358 Gene3D G3DSA:1.10.1670.10 14 215 3.4E-82 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 TF3313_2551 3bb770c75596d1be78f737e92cb4d30f 358 SUPERFAMILY SSF48150 11 225 9.26E-72 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 TF3313_2551 3bb770c75596d1be78f737e92cb4d30f 358 Gene3D G3DSA:3.90.79.10 228 358 1.3E-8 T 11-10-2018 TF3313_2551 3bb770c75596d1be78f737e92cb4d30f 358 Pfam PF14815 NUDIX domain 238 353 3.7E-16 T 11-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 TF3313_2551 3bb770c75596d1be78f737e92cb4d30f 358 Gene3D G3DSA:1.10.340.30 24 135 3.4E-82 T 11-10-2018 TF3313_2551 3bb770c75596d1be78f737e92cb4d30f 358 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 38 157 3.3E-15 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 TF3313_2551 3bb770c75596d1be78f737e92cb4d30f 358 SUPERFAMILY SSF55811 223 355 1.32E-10 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TF3313_2551 3bb770c75596d1be78f737e92cb4d30f 358 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 12 270 4.3E-96 T 11-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 TF3313_1059 608b0ef378dfbf5f98694f0d0afbf333 399 Gene3D G3DSA:3.40.47.10 1 245 9.0E-49 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TF3313_1059 608b0ef378dfbf5f98694f0d0afbf333 399 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 236 4.5E-28 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal TF3313_1059 608b0ef378dfbf5f98694f0d0afbf333 399 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 151 167 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site TF3313_1059 608b0ef378dfbf5f98694f0d0afbf333 399 SMART SM00825 Beta-ketoacyl synthase 6 390 1.2E-9 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain TF3313_1059 608b0ef378dfbf5f98694f0d0afbf333 399 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 245 356 6.9E-28 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal TF3313_1059 608b0ef378dfbf5f98694f0d0afbf333 399 SUPERFAMILY SSF53901 5 396 1.44E-56 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TF3313_1059 608b0ef378dfbf5f98694f0d0afbf333 399 Gene3D G3DSA:3.40.47.10 250 395 4.9E-41 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TF3313_1115 0bab472714fca7e5b7df864048d07b47 571 SUPERFAMILY SSF53335 135 463 3.96E-37 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_1115 0bab472714fca7e5b7df864048d07b47 571 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 348 354 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TF3313_1115 0bab472714fca7e5b7df864048d07b47 571 Gene3D G3DSA:3.40.50.150 234 476 2.8E-37 T 11-10-2018 TF3313_1115 0bab472714fca7e5b7df864048d07b47 571 Pfam PF02384 N-6 DNA Methylase 240 482 6.9E-17 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 TF3313_1115 0bab472714fca7e5b7df864048d07b47 571 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 345 357 9.7E-15 T 11-10-2018 TF3313_1115 0bab472714fca7e5b7df864048d07b47 571 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 268 282 9.7E-15 T 11-10-2018 TF3313_1115 0bab472714fca7e5b7df864048d07b47 571 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 238 254 9.7E-15 T 11-10-2018 TF3313_1115 0bab472714fca7e5b7df864048d07b47 571 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 382 406 9.7E-15 T 11-10-2018 TF3313_1327 c593c424dfdbd8b1b6503284bcaae310 229 PIRSF PIRSF026671 9 229 4.1E-58 T 11-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 TF3313_1327 c593c424dfdbd8b1b6503284bcaae310 229 Hamap MF_01924 D-alanyl-D-alanine dipeptidase [ddpX]. 39 228 27.967 T 11-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 TF3313_1327 c593c424dfdbd8b1b6503284bcaae310 229 Gene3D G3DSA:3.30.1380.10 37 227 3.5E-51 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 TF3313_1327 c593c424dfdbd8b1b6503284bcaae310 229 Pfam PF01427 D-ala-D-ala dipeptidase 37 217 2.3E-28 T 11-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 TF3313_1327 c593c424dfdbd8b1b6503284bcaae310 229 SUPERFAMILY SSF55166 39 222 1.26E-50 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 TF3313_0739 981809d66a02ed818fd040284e5d0efa 662 TIGRFAM TIGR01228 hutU: urocanate hydratase 90 632 5.8E-129 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TF3313_0739 981809d66a02ed818fd040284e5d0efa 662 Pfam PF01175 Urocanase Rossmann-like domain 207 430 8.9E-82 T 11-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TF3313_0739 981809d66a02ed818fd040284e5d0efa 662 PIRSF PIRSF001423 67 646 1.4E-178 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TF3313_0739 981809d66a02ed818fd040284e5d0efa 662 Gene3D G3DSA:3.40.50.10730 213 429 3.6E-76 T 11-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TF3313_0739 981809d66a02ed818fd040284e5d0efa 662 Pfam PF17392 Urocanase C-terminal domain 434 632 3.6E-81 T 11-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TF3313_0739 981809d66a02ed818fd040284e5d0efa 662 Pfam PF17391 Urocanase N-terminal domain 78 204 1.3E-52 T 11-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TF3313_0739 981809d66a02ed818fd040284e5d0efa 662 SUPERFAMILY SSF111326 70 638 3.14E-225 T 11-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TF3313_0739 981809d66a02ed818fd040284e5d0efa 662 Gene3D G3DSA:3.40.1770.10 436 638 5.7E-88 T 11-10-2018 TF3313_0739 981809d66a02ed818fd040284e5d0efa 662 Gene3D G3DSA:3.40.1770.10 77 212 2.1E-45 T 11-10-2018 TF3313_0739 981809d66a02ed818fd040284e5d0efa 662 Hamap MF_00577 Urocanate hydratase [hutU]. 49 648 43.049 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TF3313_0739 981809d66a02ed818fd040284e5d0efa 662 ProSitePatterns PS01233 Urocanase signature. 528 543 - T 11-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TF3313_1105 212906cea48e96bb6e5881da2b123a35 221 Pfam PF01914 MarC family integral membrane protein 9 205 8.4E-56 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 TF3313_1105 212906cea48e96bb6e5881da2b123a35 221 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 201 1.5E-55 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 TF3313_2295 107b98d28dc1daf12ab784a2b823ab46 245 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 30 137 1.4E-22 T 11-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 TF3313_2295 107b98d28dc1daf12ab784a2b823ab46 245 Gene3D G3DSA:3.10.50.40 126 233 1.6E-41 T 11-10-2018 TF3313_2295 107b98d28dc1daf12ab784a2b823ab46 245 Gene3D G3DSA:1.10.287.460 24 125 7.9E-20 T 11-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 TF3313_2295 107b98d28dc1daf12ab784a2b823ab46 245 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 145 232 7.1E-27 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain TF3313_2295 107b98d28dc1daf12ab784a2b823ab46 245 SUPERFAMILY SSF54534 34 234 2.95E-53 T 11-10-2018 TF3313_1363 e931a08ae8da3bd28c248092dae9e28d 608 Pfam PF08676 MutL C terminal dimerisation domain 427 566 4.3E-29 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 TF3313_1363 e931a08ae8da3bd28c248092dae9e28d 608 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 95 101 - T 11-10-2018 IPR014762 DNA mismatch repair, conserved site TF3313_1363 e931a08ae8da3bd28c248092dae9e28d 608 Gene3D G3DSA:3.30.565.10 4 213 1.9E-62 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TF3313_1363 e931a08ae8da3bd28c248092dae9e28d 608 Gene3D G3DSA:3.30.1370.100 466 563 1.3E-43 T 11-10-2018 TF3313_1363 e931a08ae8da3bd28c248092dae9e28d 608 Gene3D G3DSA:3.30.230.10 214 326 3.1E-30 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TF3313_1363 e931a08ae8da3bd28c248092dae9e28d 608 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 3 606 22.692 T 11-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 TF3313_1363 e931a08ae8da3bd28c248092dae9e28d 608 SMART SM01340 209 327 7.8E-43 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 TF3313_1363 e931a08ae8da3bd28c248092dae9e28d 608 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 210 326 6.6E-33 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 TF3313_1363 e931a08ae8da3bd28c248092dae9e28d 608 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 5 306 2.1E-89 T 11-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 TF3313_1363 e931a08ae8da3bd28c248092dae9e28d 608 Gene3D G3DSA:2.30.42.20 427 607 1.3E-43 T 11-10-2018 TF3313_1363 e931a08ae8da3bd28c248092dae9e28d 608 SUPERFAMILY SSF118116 425 607 1.05E-35 T 11-10-2018 IPR037198 MutL, C-terminal domain superfamily TF3313_1363 e931a08ae8da3bd28c248092dae9e28d 608 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 126 1.9E-11 T 11-10-2018 TF3313_1363 e931a08ae8da3bd28c248092dae9e28d 608 SUPERFAMILY SSF55874 5 204 6.81E-48 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TF3313_1363 e931a08ae8da3bd28c248092dae9e28d 608 SUPERFAMILY SSF54211 192 327 7.59E-32 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TF3313_1363 e931a08ae8da3bd28c248092dae9e28d 608 SMART SM00853 424 566 1.4E-30 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 TF3313_2671 81ad36bd16bff58562f3e3c8890861e2 208 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 12 183 1.1E-17 T 11-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 TF3313_2671 81ad36bd16bff58562f3e3c8890861e2 208 Gene3D G3DSA:2.60.450.10 66 194 5.1E-6 T 11-10-2018 TF3313_2671 81ad36bd16bff58562f3e3c8890861e2 208 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 57 183 2.0E-12 T 11-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related TF3313_1331 5a73327e56d6ce50e7b0538f5adf897f 111 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 96 1.0E-27 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 TF3313_1331 5a73327e56d6ce50e7b0538f5adf897f 111 SUPERFAMILY SSF89919 1 111 8.37E-27 T 11-10-2018 IPR023799 Ribosome-binding factor A domain superfamily TF3313_1331 5a73327e56d6ce50e7b0538f5adf897f 111 Gene3D G3DSA:3.30.300.20 1 102 3.6E-24 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta TF3313_1331 5a73327e56d6ce50e7b0538f5adf897f 111 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 4 109 21.779 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 TF3313_1331 5a73327e56d6ce50e7b0538f5adf897f 111 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 4 110 4.3E-19 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 TF3313_1331 5a73327e56d6ce50e7b0538f5adf897f 111 Pfam PF02033 Ribosome-binding factor A 5 109 1.8E-24 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 TF3313_1212 cfc0bcedf35cf0f1583320222c3ba035 280 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 20 275 1.7E-93 T 11-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 TF3313_1212 cfc0bcedf35cf0f1583320222c3ba035 280 Pfam PF00809 Pterin binding enzyme 21 262 1.2E-72 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TF3313_1212 cfc0bcedf35cf0f1583320222c3ba035 280 Gene3D G3DSA:3.20.20.20 1 280 9.3E-97 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TF3313_1212 cfc0bcedf35cf0f1583320222c3ba035 280 SUPERFAMILY SSF51717 8 279 4.84E-88 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TF3313_0775 ac67468bcdd2b7955de3d59976b89029 422 Pfam PF04055 Radical SAM superfamily 63 195 5.3E-7 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TF3313_0775 ac67468bcdd2b7955de3d59976b89029 422 Pfam PF12836 Helix-hairpin-helix motif 326 363 2.5E-6 T 11-10-2018 TF3313_0775 ac67468bcdd2b7955de3d59976b89029 422 Gene3D G3DSA:3.20.20.70 50 190 7.5E-8 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_0775 ac67468bcdd2b7955de3d59976b89029 422 SUPERFAMILY SSF102114 36 198 2.09E-14 T 11-10-2018 TF3313_0775 ac67468bcdd2b7955de3d59976b89029 422 SUPERFAMILY SSF47781 303 382 2.22E-13 T 11-10-2018 IPR010994 RuvA domain 2-like TF3313_0775 ac67468bcdd2b7955de3d59976b89029 422 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 5 413 1.7E-198 T 11-10-2018 IPR023874 DNA modification/repair radical SAM protein, putative TF3313_0775 ac67468bcdd2b7955de3d59976b89029 422 Gene3D G3DSA:1.10.150.320 310 381 1.7E-5 T 11-10-2018 TF3313_1605 85f0394c4be3966152e021d2a3afa3db 121 SMART SM00347 24 118 5.1E-14 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TF3313_1605 85f0394c4be3966152e021d2a3afa3db 121 Pfam PF01047 MarR family 34 88 4.4E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TF3313_1605 85f0394c4be3966152e021d2a3afa3db 121 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 4.0E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TF3313_1605 85f0394c4be3966152e021d2a3afa3db 121 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 4.0E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TF3313_1605 85f0394c4be3966152e021d2a3afa3db 121 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 4.0E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TF3313_1605 85f0394c4be3966152e021d2a3afa3db 121 SUPERFAMILY SSF46785 5 109 1.35E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TF3313_1605 85f0394c4be3966152e021d2a3afa3db 121 Gene3D G3DSA:1.10.10.10 4 120 3.7E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_0206 b13489682209418f2029b11b93138312 203 SUPERFAMILY SSF51064 147 202 6.15E-13 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 TF3313_0206 b13489682209418f2029b11b93138312 203 PRINTS PR00773 GrpE protein signature 71 87 4.4E-22 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TF3313_0206 b13489682209418f2029b11b93138312 203 PRINTS PR00773 GrpE protein signature 154 169 4.4E-22 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TF3313_0206 b13489682209418f2029b11b93138312 203 PRINTS PR00773 GrpE protein signature 182 201 4.4E-22 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TF3313_0206 b13489682209418f2029b11b93138312 203 PRINTS PR00773 GrpE protein signature 99 114 4.4E-22 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TF3313_0206 b13489682209418f2029b11b93138312 203 SUPERFAMILY SSF58014 53 146 5.75E-25 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 TF3313_0206 b13489682209418f2029b11b93138312 203 Gene3D G3DSA:3.90.20.20 1 145 8.7E-27 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 TF3313_0206 b13489682209418f2029b11b93138312 203 Gene3D G3DSA:2.30.22.10 146 203 5.9E-18 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 TF3313_0206 b13489682209418f2029b11b93138312 203 Pfam PF01025 GrpE 48 202 1.5E-48 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TF3313_0206 b13489682209418f2029b11b93138312 203 Hamap MF_01151 Protein GrpE [grpE]. 3 203 18.047 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TF3313_0400 38351b1341ebe5f693bdaaa7f62a7de5 222 Gene3D G3DSA:3.40.50.300 1 221 2.5E-63 T 11-10-2018 TF3313_0400 38351b1341ebe5f693bdaaa7f62a7de5 222 Pfam PF00005 ABC transporter 20 168 1.3E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TF3313_0400 38351b1341ebe5f693bdaaa7f62a7de5 222 SUPERFAMILY SSF52540 1 219 1.92E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0400 38351b1341ebe5f693bdaaa7f62a7de5 222 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TF3313_0400 38351b1341ebe5f693bdaaa7f62a7de5 222 SMART SM00382 29 216 9.1E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_0016 e40869cd63a933bcaee424f89719601b 345 Pfam PF01032 FecCD transport family 16 336 5.7E-75 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 TF3313_0016 e40869cd63a933bcaee424f89719601b 345 Gene3D G3DSA:1.10.3470.10 1 343 4.1E-87 T 11-10-2018 IPR037294 ABC transporter, BtuC-like TF3313_0016 e40869cd63a933bcaee424f89719601b 345 SUPERFAMILY SSF81345 2 335 9.68E-66 T 11-10-2018 IPR037294 ABC transporter, BtuC-like TF3313_0541 63a1ac78129b74f33b5837d3ecde581a 195 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 18 181 2.4E-50 T 11-10-2018 IPR014327 RNA polymerase sigma-70, Bacteroidetes type TF3313_0541 63a1ac78129b74f33b5837d3ecde581a 195 Pfam PF04542 Sigma-70 region 2 26 85 3.4E-7 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_0541 63a1ac78129b74f33b5837d3ecde581a 195 Gene3D G3DSA:1.10.10.10 82 184 7.4E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_0541 63a1ac78129b74f33b5837d3ecde581a 195 SUPERFAMILY SSF88659 118 181 1.2E-14 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TF3313_0541 63a1ac78129b74f33b5837d3ecde581a 195 Gene3D G3DSA:1.10.1740.10 7 81 1.2E-11 T 11-10-2018 TF3313_0541 63a1ac78129b74f33b5837d3ecde581a 195 SUPERFAMILY SSF88946 8 95 4.32E-15 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_0541 63a1ac78129b74f33b5837d3ecde581a 195 Pfam PF08281 Sigma-70, region 4 125 177 5.4E-13 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TF3313_0541 63a1ac78129b74f33b5837d3ecde581a 195 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 181 2.0E-23 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TF3313_0483 a3b38428b00ffab5aadf2b8d9f0ddb99 172 Pfam PF03734 L,D-transpeptidase catalytic domain 37 170 4.7E-19 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 TF3313_0483 a3b38428b00ffab5aadf2b8d9f0ddb99 172 SUPERFAMILY SSF141523 37 170 4.05E-26 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like TF3313_0483 a3b38428b00ffab5aadf2b8d9f0ddb99 172 Gene3D G3DSA:2.40.440.10 17 172 4.4E-25 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like TF3313_0095 773d544d106e4faf21cacb1b941e9116 791 Gene3D G3DSA:2.40.170.20 257 786 1.2E-43 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_0095 773d544d106e4faf21cacb1b941e9116 791 Pfam PF07715 TonB-dependent Receptor Plug Domain 132 235 2.3E-17 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_0095 773d544d106e4faf21cacb1b941e9116 791 Pfam PF00593 TonB dependent receptor 370 784 7.8E-32 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_0095 773d544d106e4faf21cacb1b941e9116 791 SUPERFAMILY SSF56935 111 786 2.09E-78 T 11-10-2018 TF3313_0095 773d544d106e4faf21cacb1b941e9116 791 Gene3D G3DSA:2.170.130.10 110 240 3.4E-24 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_1074 181a6dceaebb60026e10fb6a78193d69 34 Gene3D G3DSA:3.40.50.720 11 27 1.3E-8 T 11-10-2018 TF3313_1074 181a6dceaebb60026e10fb6a78193d69 34 Gene3D G3DSA:3.30.360.10 1 10 1.3E-8 T 11-10-2018 TF3313_0791 937287b8e9b1cb3db9d67153106df5ee 478 Gene3D G3DSA:3.30.499.20 21 303 2.0E-97 T 11-10-2018 TF3313_0791 937287b8e9b1cb3db9d67153106df5ee 478 ProSitePatterns PS01244 Aconitase family signature 2. 415 428 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 TF3313_0791 937287b8e9b1cb3db9d67153106df5ee 478 PRINTS PR00415 Aconitase family signature 303 317 7.6E-45 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TF3313_0791 937287b8e9b1cb3db9d67153106df5ee 478 PRINTS PR00415 Aconitase family signature 359 370 7.6E-45 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TF3313_0791 937287b8e9b1cb3db9d67153106df5ee 478 PRINTS PR00415 Aconitase family signature 136 149 7.6E-45 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TF3313_0791 937287b8e9b1cb3db9d67153106df5ee 478 PRINTS PR00415 Aconitase family signature 99 112 7.6E-45 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TF3313_0791 937287b8e9b1cb3db9d67153106df5ee 478 PRINTS PR00415 Aconitase family signature 226 239 7.6E-45 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TF3313_0791 937287b8e9b1cb3db9d67153106df5ee 478 PRINTS PR00415 Aconitase family signature 125 133 7.6E-45 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TF3313_0791 937287b8e9b1cb3db9d67153106df5ee 478 PRINTS PR00415 Aconitase family signature 415 428 7.6E-45 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TF3313_0791 937287b8e9b1cb3db9d67153106df5ee 478 PRINTS PR00415 Aconitase family signature 150 165 7.6E-45 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TF3313_0791 937287b8e9b1cb3db9d67153106df5ee 478 PRINTS PR00415 Aconitase family signature 212 225 7.6E-45 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TF3313_0791 937287b8e9b1cb3db9d67153106df5ee 478 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 20 475 3.9E-197 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 TF3313_0791 937287b8e9b1cb3db9d67153106df5ee 478 Pfam PF00330 Aconitase family (aconitate hydratase) 24 473 8.9E-147 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TF3313_0791 937287b8e9b1cb3db9d67153106df5ee 478 Gene3D G3DSA:3.30.499.10 342 478 1.2E-45 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 TF3313_0791 937287b8e9b1cb3db9d67153106df5ee 478 SUPERFAMILY SSF53732 15 478 2.75E-159 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 TF3313_0791 937287b8e9b1cb3db9d67153106df5ee 478 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 18 478 51.795 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 TF3313_0805 4dfda163befb52b2b2462fa112c71d51 1229 Gene3D G3DSA:1.10.1240.10 646 734 3.0E-34 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TF3313_0805 4dfda163befb52b2b2462fa112c71d51 1229 Gene3D G3DSA:3.20.20.330 1 334 2.3E-118 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 TF3313_0805 4dfda163befb52b2b2462fa112c71d51 1229 Gene3D G3DSA:3.10.196.10 902 1226 2.2E-99 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TF3313_0805 4dfda163befb52b2b2462fa112c71d51 1229 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 936 1214 1.9E-89 T 11-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TF3313_0805 4dfda163befb52b2b2462fa112c71d51 1229 SUPERFAMILY SSF52242 743 890 4.58E-43 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 TF3313_0805 4dfda163befb52b2b2462fa112c71d51 1229 SMART SM01018 654 737 9.4E-37 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TF3313_0805 4dfda163befb52b2b2462fa112c71d51 1229 Gene3D G3DSA:1.10.288.10 934 1099 2.2E-99 T 11-10-2018 TF3313_0805 4dfda163befb52b2b2462fa112c71d51 1229 SUPERFAMILY SSF51717 354 628 7.85E-80 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TF3313_0805 4dfda163befb52b2b2462fa112c71d51 1229 Gene3D G3DSA:3.40.50.280 743 894 1.6E-52 T 11-10-2018 TF3313_0805 4dfda163befb52b2b2462fa112c71d51 1229 SUPERFAMILY SSF47644 650 736 3.53E-24 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TF3313_0805 4dfda163befb52b2b2462fa112c71d51 1229 Pfam PF02607 B12 binding domain 657 729 8.9E-23 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TF3313_0805 4dfda163befb52b2b2462fa112c71d51 1229 Pfam PF02310 B12 binding domain 747 842 4.5E-19 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 TF3313_0805 4dfda163befb52b2b2462fa112c71d51 1229 Pfam PF02574 Homocysteine S-methyltransferase 15 321 5.0E-75 T 11-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 TF3313_0805 4dfda163befb52b2b2462fa112c71d51 1229 Gene3D G3DSA:3.20.20.20 338 640 7.5E-127 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TF3313_0805 4dfda163befb52b2b2462fa112c71d51 1229 Pfam PF00809 Pterin binding enzyme 358 596 4.9E-55 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TF3313_0805 4dfda163befb52b2b2462fa112c71d51 1229 TIGRFAM TIGR02082 metH: methionine synthase 10 1198 0.0 T 11-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TF3313_0805 4dfda163befb52b2b2462fa112c71d51 1229 SUPERFAMILY SSF82282 4 397 2.09E-109 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 TF3313_0805 4dfda163befb52b2b2462fa112c71d51 1229 PIRSF PIRSF000381 1 1201 0.0 T 11-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TF3313_0805 4dfda163befb52b2b2462fa112c71d51 1229 SUPERFAMILY SSF56507 900 1225 9.68E-85 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TF3313_0021 17ac8c1c5977bffb3e861d9e8c5b23b6 304 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 40 59 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 TF3313_0021 17ac8c1c5977bffb3e861d9e8c5b23b6 304 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 4 300 5.0E-107 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 TF3313_0021 17ac8c1c5977bffb3e861d9e8c5b23b6 304 Pfam PF01180 Dihydroorotate dehydrogenase 4 284 1.5E-70 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 TF3313_0021 17ac8c1c5977bffb3e861d9e8c5b23b6 304 SUPERFAMILY SSF51395 1 301 2.27E-82 T 11-10-2018 TF3313_0021 17ac8c1c5977bffb3e861d9e8c5b23b6 304 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 4 301 39.944 T 11-10-2018 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 TF3313_0021 17ac8c1c5977bffb3e861d9e8c5b23b6 304 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 239 259 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 TF3313_0021 17ac8c1c5977bffb3e861d9e8c5b23b6 304 Gene3D G3DSA:3.20.20.70 12 291 6.1E-95 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_0021 17ac8c1c5977bffb3e861d9e8c5b23b6 304 PIRSF PIRSF000164 1 302 1.0E-77 T 11-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 TF3313_0021 17ac8c1c5977bffb3e861d9e8c5b23b6 304 Gene3D G3DSA:2.30.26.10 55 216 6.1E-95 T 11-10-2018 IPR023359 Dihydroorotate dehydrogenase A, chain A, domain 2 TF3313_0093 4449387f3e9aa3a5f4fd4be41b266430 326 SMART SM00342 240 323 7.2E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TF3313_0093 4449387f3e9aa3a5f4fd4be41b266430 326 Pfam PF12833 Helix-turn-helix domain 246 323 1.3E-16 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TF3313_0093 4449387f3e9aa3a5f4fd4be41b266430 326 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 277 319 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TF3313_0093 4449387f3e9aa3a5f4fd4be41b266430 326 Gene3D G3DSA:1.10.10.60 220 326 3.5E-23 T 11-10-2018 TF3313_0093 4449387f3e9aa3a5f4fd4be41b266430 326 SUPERFAMILY SSF46689 277 324 4.08E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TF3313_2774 8476b16c698d861aec13d930cdd3c71f 200 Pfam PF13568 Outer membrane protein beta-barrel domain 24 173 1.5E-16 T 11-10-2018 IPR025665 Outer membrane protein beta-barrel domain TF3313_2944 ce76574f7ee6e1b008b369f5a4694ae0 507 SUPERFAMILY SSF52335 7 196 4.12E-55 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily TF3313_2944 ce76574f7ee6e1b008b369f5a4694ae0 507 SUPERFAMILY SSF53927 209 507 1.0E-105 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 TF3313_2944 ce76574f7ee6e1b008b369f5a4694ae0 507 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 507 37.156 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TF3313_2944 ce76574f7ee6e1b008b369f5a4694ae0 507 Pfam PF02142 MGS-like domain 21 132 1.7E-19 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain TF3313_2944 ce76574f7ee6e1b008b369f5a4694ae0 507 Pfam PF01808 AICARFT/IMPCHase bienzyme 138 438 5.0E-97 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TF3313_2944 ce76574f7ee6e1b008b369f5a4694ae0 507 Gene3D G3DSA:3.40.140.20 206 355 3.8E-51 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TF3313_2944 ce76574f7ee6e1b008b369f5a4694ae0 507 Gene3D G3DSA:3.40.140.20 370 507 6.0E-51 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TF3313_2944 ce76574f7ee6e1b008b369f5a4694ae0 507 SMART SM00851 19 133 5.9E-39 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain TF3313_2944 ce76574f7ee6e1b008b369f5a4694ae0 507 SMART SM00798 138 439 1.8E-131 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TF3313_2944 ce76574f7ee6e1b008b369f5a4694ae0 507 Gene3D G3DSA:3.40.50.1380 1 201 3.3E-73 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily TF3313_2944 ce76574f7ee6e1b008b369f5a4694ae0 507 PIRSF PIRSF000414 1 507 3.1E-185 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TF3313_0932 e0edd6e7a05b5ca52a33d547d8a66f11 163 PRINTS PR00070 Dihydrofolate reductase signature 40 51 7.9E-16 T 11-10-2018 TF3313_0932 e0edd6e7a05b5ca52a33d547d8a66f11 163 PRINTS PR00070 Dihydrofolate reductase signature 27 35 7.9E-16 T 11-10-2018 TF3313_0932 e0edd6e7a05b5ca52a33d547d8a66f11 163 PRINTS PR00070 Dihydrofolate reductase signature 13 23 7.9E-16 T 11-10-2018 TF3313_0932 e0edd6e7a05b5ca52a33d547d8a66f11 163 PRINTS PR00070 Dihydrofolate reductase signature 92 106 7.9E-16 T 11-10-2018 TF3313_0932 e0edd6e7a05b5ca52a33d547d8a66f11 163 PIRSF PIRSF000194 1 163 1.1E-55 T 11-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 TF3313_0932 e0edd6e7a05b5ca52a33d547d8a66f11 163 SUPERFAMILY SSF53597 1 162 6.59E-54 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 TF3313_0932 e0edd6e7a05b5ca52a33d547d8a66f11 163 Gene3D G3DSA:3.40.430.10 1 163 1.8E-56 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 TF3313_0932 e0edd6e7a05b5ca52a33d547d8a66f11 163 Pfam PF00186 Dihydrofolate reductase 1 161 8.2E-58 T 11-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 TF3313_0411 31a1adad55f32ffc28604b799b5735d5 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 261 277 1.7E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TF3313_0411 31a1adad55f32ffc28604b799b5735d5 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 246 261 1.7E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TF3313_0411 31a1adad55f32ffc28604b799b5735d5 282 Pfam PF02311 AraC-like ligand binding domain 32 85 9.9E-9 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 TF3313_0411 31a1adad55f32ffc28604b799b5735d5 282 SMART SM00342 194 277 2.4E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TF3313_0411 31a1adad55f32ffc28604b799b5735d5 282 Gene3D G3DSA:2.60.120.10 9 104 1.4E-8 T 11-10-2018 IPR014710 RmlC-like jelly roll fold TF3313_0411 31a1adad55f32ffc28604b799b5735d5 282 SUPERFAMILY SSF46689 233 280 6.27E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TF3313_0411 31a1adad55f32ffc28604b799b5735d5 282 Gene3D G3DSA:1.10.10.60 173 282 4.0E-22 T 11-10-2018 TF3313_0411 31a1adad55f32ffc28604b799b5735d5 282 SUPERFAMILY SSF51215 31 84 7.06E-11 T 11-10-2018 IPR037923 Transcription regulator HTH-like TF3313_0411 31a1adad55f32ffc28604b799b5735d5 282 Pfam PF12833 Helix-turn-helix domain 200 278 1.4E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TF3313_1336 707e937bfea103a1833c47d5483d5058 189 SUPERFAMILY SSF88946 3 100 2.35E-16 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_1336 707e937bfea103a1833c47d5483d5058 189 SUPERFAMILY SSF88659 97 178 1.12E-14 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TF3313_1336 707e937bfea103a1833c47d5483d5058 189 Pfam PF04542 Sigma-70 region 2 22 87 1.1E-6 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_1336 707e937bfea103a1833c47d5483d5058 189 Gene3D G3DSA:1.10.10.10 101 178 5.7E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_1336 707e937bfea103a1833c47d5483d5058 189 Pfam PF08281 Sigma-70, region 4 121 172 3.6E-13 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TF3313_1336 707e937bfea103a1833c47d5483d5058 189 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 17 176 1.0E-47 T 11-10-2018 IPR014327 RNA polymerase sigma-70, Bacteroidetes type TF3313_1336 707e937bfea103a1833c47d5483d5058 189 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 175 1.7E-23 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TF3313_1336 707e937bfea103a1833c47d5483d5058 189 Gene3D G3DSA:1.10.1740.10 1 99 2.4E-12 T 11-10-2018 TF3313_1836 22acaf269290dc1b94f0fccced0d2569 282 Gene3D G3DSA:3.90.1170.20 15 279 2.8E-105 T 11-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 TF3313_1836 22acaf269290dc1b94f0fccced0d2569 282 PIRSF PIRSF006250 2 282 7.6E-87 T 11-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 TF3313_1836 22acaf269290dc1b94f0fccced0d2569 282 SUPERFAMILY SSF54675 5 110 3.81E-28 T 11-10-2018 TF3313_1836 22acaf269290dc1b94f0fccced0d2569 282 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 20 109 2.0E-23 T 11-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 TF3313_1836 22acaf269290dc1b94f0fccced0d2569 282 Gene3D G3DSA:3.20.20.70 125 271 2.8E-105 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_1836 22acaf269290dc1b94f0fccced0d2569 282 SUPERFAMILY SSF51690 111 280 3.85E-58 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 TF3313_1836 22acaf269290dc1b94f0fccced0d2569 282 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 12 280 1.4E-95 T 11-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 TF3313_1836 22acaf269290dc1b94f0fccced0d2569 282 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 111 280 4.8E-60 T 11-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 TF3313_2208 b68c99c027852c5c08adc1a07d42458b 301 Pfam PF16119 Domain of unknown function (DUF4835) 25 298 5.8E-110 T 11-10-2018 IPR032274 Protein of unknown function DUF4835 TF3313_0357 75f4cedc4232c905bd2a49e51ac7fd9b 707 Gene3D G3DSA:2.170.130.10 35 160 1.8E-11 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_0357 75f4cedc4232c905bd2a49e51ac7fd9b 707 Gene3D G3DSA:2.40.170.20 223 691 1.8E-22 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_0357 75f4cedc4232c905bd2a49e51ac7fd9b 707 SUPERFAMILY SSF56935 41 687 5.49E-60 T 11-10-2018 TF3313_0357 75f4cedc4232c905bd2a49e51ac7fd9b 707 Pfam PF07715 TonB-dependent Receptor Plug Domain 75 157 9.2E-13 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_1066 27c49634458ba33a0324782b33f5b3d8 154 Gene3D G3DSA:3.90.550.10 2 150 3.5E-21 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_1066 27c49634458ba33a0324782b33f5b3d8 154 Pfam PF00535 Glycosyl transferase family 2 12 130 2.0E-16 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TF3313_1066 27c49634458ba33a0324782b33f5b3d8 154 SUPERFAMILY SSF53448 8 132 3.56E-20 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_1041 657ab269e5820837fb7fcac60b4b3ba8 125 SUPERFAMILY SSF51230 2 124 3.27E-44 T 11-10-2018 IPR011053 Single hybrid motif TF3313_1041 657ab269e5820837fb7fcac60b4b3ba8 125 Pfam PF01597 Glycine cleavage H-protein 7 123 1.2E-46 T 11-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate TF3313_1041 657ab269e5820837fb7fcac60b4b3ba8 125 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 47 76 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 TF3313_1041 657ab269e5820837fb7fcac60b4b3ba8 125 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 125 38.326 T 11-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 TF3313_1041 657ab269e5820837fb7fcac60b4b3ba8 125 Gene3D G3DSA:2.40.50.100 1 125 1.0E-51 T 11-10-2018 TF3313_1041 657ab269e5820837fb7fcac60b4b3ba8 125 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 123 1.2E-50 T 11-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 TF3313_1791 d5f83dbce7cb8945545f0eaf09ab3e15 511 Gene3D G3DSA:3.40.50.300 205 382 9.2E-21 T 11-10-2018 TF3313_1791 d5f83dbce7cb8945545f0eaf09ab3e15 511 Gene3D G3DSA:3.40.50.300 1 97 2.9E-9 T 11-10-2018 TF3313_1791 d5f83dbce7cb8945545f0eaf09ab3e15 511 SUPERFAMILY SSF52540 14 382 4.41E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1791 d5f83dbce7cb8945545f0eaf09ab3e15 511 Pfam PF05872 Bacterial protein of unknown function (DUF853) 10 509 2.0E-213 T 11-10-2018 IPR033186 Helicase HerA-like C-terminal TF3313_1395 a6e65f3c09220871a7582d392caa1cee 423 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 132 143 - T 11-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 TF3313_1395 a6e65f3c09220871a7582d392caa1cee 423 Gene3D G3DSA:3.90.170.10 263 422 5.4E-64 T 11-10-2018 TF3313_1395 a6e65f3c09220871a7582d392caa1cee 423 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 423 168.655 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 TF3313_1395 a6e65f3c09220871a7582d392caa1cee 423 SMART SM00788 3 419 5.3E-241 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 TF3313_1395 a6e65f3c09220871a7582d392caa1cee 423 SUPERFAMILY SSF52540 1 420 5.2E-152 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1395 a6e65f3c09220871a7582d392caa1cee 423 Gene3D G3DSA:3.40.440.10 5 256 1.5E-90 T 11-10-2018 TF3313_1395 a6e65f3c09220871a7582d392caa1cee 423 Gene3D G3DSA:1.10.300.10 101 197 1.5E-90 T 11-10-2018 TF3313_1395 a6e65f3c09220871a7582d392caa1cee 423 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 419 3.4E-154 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 TF3313_1395 a6e65f3c09220871a7582d392caa1cee 423 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 11-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 TF3313_1395 a6e65f3c09220871a7582d392caa1cee 423 Pfam PF00709 Adenylosuccinate synthetase 5 418 5.8E-168 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 TF3313_1209 fc760ba95bf94b73ba9437283ec2fa01 403 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 3 14 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TF3313_1209 fc760ba95bf94b73ba9437283ec2fa01 403 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 204 221 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TF3313_1209 fc760ba95bf94b73ba9437283ec2fa01 403 PIRSF PIRSF000722 1 401 1.2E-148 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TF3313_1209 fc760ba95bf94b73ba9437283ec2fa01 403 TIGRFAM TIGR00016 ackA: acetate kinase 1 395 4.0E-154 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TF3313_1209 fc760ba95bf94b73ba9437283ec2fa01 403 Gene3D G3DSA:3.30.420.40 1 196 6.3E-76 T 11-10-2018 TF3313_1209 fc760ba95bf94b73ba9437283ec2fa01 403 SUPERFAMILY SSF53067 1 196 4.6E-69 T 11-10-2018 TF3313_1209 fc760ba95bf94b73ba9437283ec2fa01 403 Gene3D G3DSA:3.30.420.40 197 402 4.0E-80 T 11-10-2018 TF3313_1209 fc760ba95bf94b73ba9437283ec2fa01 403 SUPERFAMILY SSF53067 158 398 3.69E-89 T 11-10-2018 TF3313_1209 fc760ba95bf94b73ba9437283ec2fa01 403 Pfam PF00871 Acetokinase family 2 390 1.2E-156 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TF3313_1209 fc760ba95bf94b73ba9437283ec2fa01 403 PRINTS PR00471 Acetate kinase family signature 3 14 3.1E-44 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TF3313_1209 fc760ba95bf94b73ba9437283ec2fa01 403 PRINTS PR00471 Acetate kinase family signature 301 314 3.1E-44 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TF3313_1209 fc760ba95bf94b73ba9437283ec2fa01 403 PRINTS PR00471 Acetate kinase family signature 204 225 3.1E-44 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TF3313_1209 fc760ba95bf94b73ba9437283ec2fa01 403 PRINTS PR00471 Acetate kinase family signature 323 339 3.1E-44 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TF3313_1209 fc760ba95bf94b73ba9437283ec2fa01 403 PRINTS PR00471 Acetate kinase family signature 378 390 3.1E-44 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TF3313_1209 fc760ba95bf94b73ba9437283ec2fa01 403 PRINTS PR00471 Acetate kinase family signature 174 187 3.1E-44 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TF3313_1209 fc760ba95bf94b73ba9437283ec2fa01 403 Hamap MF_00020 Acetate kinase [ackA]. 1 400 187.235 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TF3313_1563 cf45fd90e9d3b604cb32bd76496491f9 582 SUPERFAMILY SSF159501 201 552 4.19E-47 T 11-10-2018 TF3313_1563 cf45fd90e9d3b604cb32bd76496491f9 582 Gene3D G3DSA:3.30.1870.10 236 309 7.4E-22 T 11-10-2018 TF3313_1563 cf45fd90e9d3b604cb32bd76496491f9 582 Gene3D G3DSA:1.20.1440.30 310 416 7.4E-22 T 11-10-2018 TF3313_1563 cf45fd90e9d3b604cb32bd76496491f9 582 Gene3D G3DSA:3.40.1660.10 206 518 7.4E-22 T 11-10-2018 TF3313_1563 cf45fd90e9d3b604cb32bd76496491f9 582 Pfam PF05139 Erythromycin esterase 236 548 6.6E-18 T 11-10-2018 IPR007815 Erythromycin esterase GO:0046677 TF3313_1686 8b8eadbe7d673c629a54b3dbb9e2334a 232 Gene3D G3DSA:1.10.150.240 18 108 4.2E-63 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 TF3313_1686 8b8eadbe7d673c629a54b3dbb9e2334a 232 Gene3D G3DSA:3.40.50.1000 5 217 4.2E-63 T 11-10-2018 IPR023214 HAD superfamily TF3313_1686 8b8eadbe7d673c629a54b3dbb9e2334a 232 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 205 1.3E-24 T 11-10-2018 TF3313_1686 8b8eadbe7d673c629a54b3dbb9e2334a 232 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 106 196 3.2E-12 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TF3313_1686 8b8eadbe7d673c629a54b3dbb9e2334a 232 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 5 231 8.5E-70 T 11-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 TF3313_1686 8b8eadbe7d673c629a54b3dbb9e2334a 232 SUPERFAMILY SSF56784 5 232 1.65E-43 T 11-10-2018 IPR036412 HAD-like superfamily TF3313_1858 26152177073ad4ad154bb8af02f8c31c 679 SUPERFAMILY SSF140356 6 107 8.37E-30 T 11-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 TF3313_1858 26152177073ad4ad154bb8af02f8c31c 679 Hamap MF_00347 Polyphosphate kinase [ppk]. 5 674 26.11 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 TF3313_1858 26152177073ad4ad154bb8af02f8c31c 679 SUPERFAMILY SSF56024 496 674 2.24E-60 T 11-10-2018 TF3313_1858 26152177073ad4ad154bb8af02f8c31c 679 Gene3D G3DSA:3.30.870.10 499 677 6.6E-66 T 11-10-2018 TF3313_1858 26152177073ad4ad154bb8af02f8c31c 679 SUPERFAMILY SSF143724 110 303 4.32E-52 T 11-10-2018 TF3313_1858 26152177073ad4ad154bb8af02f8c31c 679 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 670 2.7E-213 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 TF3313_1858 26152177073ad4ad154bb8af02f8c31c 679 Pfam PF13089 Polyphosphate kinase N-terminal domain 8 112 3.3E-31 T 11-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 TF3313_1858 26152177073ad4ad154bb8af02f8c31c 679 Pfam PF13090 Polyphosphate kinase C-terminal domain 327 669 2.7E-134 T 11-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 TF3313_1858 26152177073ad4ad154bb8af02f8c31c 679 Gene3D G3DSA:3.30.1840.10 1 310 2.3E-98 T 11-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 TF3313_1858 26152177073ad4ad154bb8af02f8c31c 679 SUPERFAMILY SSF56024 314 485 4.71E-49 T 11-10-2018 TF3313_1858 26152177073ad4ad154bb8af02f8c31c 679 PIRSF PIRSF015589 1 678 3.8E-238 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 TF3313_1858 26152177073ad4ad154bb8af02f8c31c 679 Pfam PF02503 Polyphosphate kinase middle domain 122 302 4.9E-46 T 11-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 TF3313_1858 26152177073ad4ad154bb8af02f8c31c 679 Gene3D G3DSA:3.30.870.10 313 495 4.6E-68 T 11-10-2018 TF3313_1798 ed2ca65078ae36865df586ca408fe1ad 349 Pfam PF00501 AMP-binding enzyme 48 193 2.9E-17 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TF3313_1798 ed2ca65078ae36865df586ca408fe1ad 349 SUPERFAMILY SSF56801 46 344 1.83E-44 T 11-10-2018 TF3313_1798 ed2ca65078ae36865df586ca408fe1ad 349 Gene3D G3DSA:3.30.300.30 251 349 4.2E-22 T 11-10-2018 TF3313_1798 ed2ca65078ae36865df586ca408fe1ad 349 Gene3D G3DSA:3.40.50.12780 14 250 9.8E-58 T 11-10-2018 TF3313_0381 b5f64490e949387b799ccbaafea55601 392 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 126 272 1.4E-32 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 TF3313_0381 b5f64490e949387b799ccbaafea55601 392 SUPERFAMILY SSF52283 40 146 1.74E-17 T 11-10-2018 TF3313_0381 b5f64490e949387b799ccbaafea55601 392 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 47 281 2.6E-16 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 TF3313_0381 b5f64490e949387b799ccbaafea55601 392 Gene3D G3DSA:3.40.50.720 109 273 1.1E-103 T 11-10-2018 TF3313_0381 b5f64490e949387b799ccbaafea55601 392 Gene3D G3DSA:3.30.1370.170 315 392 1.5E-6 T 11-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 TF3313_0381 b5f64490e949387b799ccbaafea55601 392 Gene3D G3DSA:3.40.50.720 19 291 1.1E-103 T 11-10-2018 TF3313_0381 b5f64490e949387b799ccbaafea55601 392 SUPERFAMILY SSF51735 110 273 1.28E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_0381 b5f64490e949387b799ccbaafea55601 392 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 18 374 37.816 T 11-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 TF3313_1425 5974ac941cd48ef475e8f0d6fa84a467 89 ProSitePatterns PS00527 Ribosomal protein S14 signature. 51 73 - T 11-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1425 5974ac941cd48ef475e8f0d6fa84a467 89 Gene3D G3DSA:4.10.830.10 27 89 9.7E-26 T 11-10-2018 TF3313_1425 5974ac941cd48ef475e8f0d6fa84a467 89 SUPERFAMILY SSF57716 2 89 3.56E-33 T 11-10-2018 TF3313_1425 5974ac941cd48ef475e8f0d6fa84a467 89 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 89 25.004 T 11-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid TF3313_1425 5974ac941cd48ef475e8f0d6fa84a467 89 Pfam PF00253 Ribosomal protein S14p/S29e 36 88 2.8E-28 T 11-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1435 e741f6013f17ee4ae7c209f8ee529fb3 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 5.7E-14 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1435 e741f6013f17ee4ae7c209f8ee529fb3 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 17.829 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1435 e741f6013f17ee4ae7c209f8ee529fb3 38 SUPERFAMILY SSF57840 1 38 1.1E-15 T 11-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1435 e741f6013f17ee4ae7c209f8ee529fb3 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 14 38 0.004 T 11-10-2018 TF3313_1435 e741f6013f17ee4ae7c209f8ee529fb3 38 Pfam PF00444 Ribosomal protein L36 1 38 8.3E-21 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2530 9f432c3f01408583451fa7ec00c0809d 464 Gene3D G3DSA:4.10.520.10 2 95 1.4E-17 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 TF3313_2530 9f432c3f01408583451fa7ec00c0809d 464 Pfam PF00216 Bacterial DNA-binding protein 9 94 1.9E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TF3313_2530 9f432c3f01408583451fa7ec00c0809d 464 SUPERFAMILY SSF47729 8 94 1.18E-17 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 TF3313_2530 9f432c3f01408583451fa7ec00c0809d 464 SMART SM00411 5 94 1.9E-13 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TF3313_2211 faf77c4c85439e3a092f2529c18608b5 115 SUPERFAMILY SSF74731 3 114 2.62E-43 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2211 faf77c4c85439e3a092f2529c18608b5 115 Gene3D G3DSA:1.10.720.90 2 55 5.3E-18 T 11-10-2018 TF3313_2211 faf77c4c85439e3a092f2529c18608b5 115 PRINTS PR00062 Ribosomal protein L20 signature 12 41 3.6E-34 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2211 faf77c4c85439e3a092f2529c18608b5 115 PRINTS PR00062 Ribosomal protein L20 signature 42 71 3.6E-34 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2211 faf77c4c85439e3a092f2529c18608b5 115 PRINTS PR00062 Ribosomal protein L20 signature 75 101 3.6E-34 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2211 faf77c4c85439e3a092f2529c18608b5 115 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 113 1.2E-45 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2211 faf77c4c85439e3a092f2529c18608b5 115 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 70 2.0E-13 T 11-10-2018 TF3313_2211 faf77c4c85439e3a092f2529c18608b5 115 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2211 faf77c4c85439e3a092f2529c18608b5 115 Gene3D G3DSA:1.10.1900.20 56 115 1.4E-28 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2211 faf77c4c85439e3a092f2529c18608b5 115 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 26.527 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2211 faf77c4c85439e3a092f2529c18608b5 115 Pfam PF00453 Ribosomal protein L20 3 108 2.2E-43 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1969 8c4465dfef41407da82f4f0ee0d28408 157 PIRSF PIRSF027377 1 140 1.7E-59 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 TF3313_1969 8c4465dfef41407da82f4f0ee0d28408 157 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 157 60.414 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 TF3313_1969 8c4465dfef41407da82f4f0ee0d28408 157 SUPERFAMILY SSF55620 20 124 2.15E-26 T 11-10-2018 TF3313_1969 8c4465dfef41407da82f4f0ee0d28408 157 Gene3D G3DSA:3.30.1130.10 14 152 1.3E-56 T 11-10-2018 TF3313_1969 8c4465dfef41407da82f4f0ee0d28408 157 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 21 131 8.5E-52 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 TF3313_1969 8c4465dfef41407da82f4f0ee0d28408 157 Pfam PF14489 QueF-like protein 55 133 4.6E-33 T 11-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 TF3313_2506 05ba917ea824e773b98bbcb8be54b6a0 391 SMART SM00635 23 104 0.0034 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_2506 05ba917ea824e773b98bbcb8be54b6a0 391 SMART SM00635 118 198 2.3E-7 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_2506 05ba917ea824e773b98bbcb8be54b6a0 391 SMART SM00635 207 287 2.1E-7 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_2506 05ba917ea824e773b98bbcb8be54b6a0 391 SMART SM00635 307 389 12.0 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_2506 05ba917ea824e773b98bbcb8be54b6a0 391 SUPERFAMILY SSF49373 117 200 1.41E-9 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments TF3313_2506 05ba917ea824e773b98bbcb8be54b6a0 391 SUPERFAMILY SSF49373 206 288 1.8E-8 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments TF3313_2506 05ba917ea824e773b98bbcb8be54b6a0 391 Gene3D G3DSA:2.60.40.1080 27 113 1.2E-9 T 11-10-2018 TF3313_2506 05ba917ea824e773b98bbcb8be54b6a0 391 Pfam PF02368 Bacterial Ig-like domain (group 2) 120 197 3.2E-10 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_2506 05ba917ea824e773b98bbcb8be54b6a0 391 Pfam PF02368 Bacterial Ig-like domain (group 2) 210 288 3.5E-11 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_2506 05ba917ea824e773b98bbcb8be54b6a0 391 Gene3D G3DSA:2.60.40.1080 116 201 8.1E-17 T 11-10-2018 TF3313_2506 05ba917ea824e773b98bbcb8be54b6a0 391 Gene3D G3DSA:2.60.40.1080 205 290 2.9E-18 T 11-10-2018 TF3313_2506 05ba917ea824e773b98bbcb8be54b6a0 391 Gene3D G3DSA:2.60.40.1080 307 391 1.2E-5 T 11-10-2018 TF3313_0028 f254b4b446d0f3fde08b5d5cd224834d 440 Hamap MF_00027 Hydrogenobyrinate a,c-diamide synthase [cobB]. 2 428 38.412 T 11-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 TF3313_0028 f254b4b446d0f3fde08b5d5cd224834d 440 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 188 5.2E-14 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain TF3313_0028 f254b4b446d0f3fde08b5d5cd224834d 440 Gene3D G3DSA:3.40.50.880 245 421 1.0E-7 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TF3313_0028 f254b4b446d0f3fde08b5d5cd224834d 440 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 6 428 6.6E-108 T 11-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 TF3313_0028 f254b4b446d0f3fde08b5d5cd224834d 440 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 245 427 6.6E-37 T 11-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 TF3313_0028 f254b4b446d0f3fde08b5d5cd224834d 440 Gene3D G3DSA:3.40.50.300 3 188 7.6E-26 T 11-10-2018 TF3313_0028 f254b4b446d0f3fde08b5d5cd224834d 440 SUPERFAMILY SSF52317 243 434 8.25E-27 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TF3313_0028 f254b4b446d0f3fde08b5d5cd224834d 440 SUPERFAMILY SSF52540 1 191 1.78E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0774 2040a0bff7fa904c46c36d381eff2409 341 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 25 182 35.661 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 TF3313_0774 2040a0bff7fa904c46c36d381eff2409 341 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 26 176 6.1E-60 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 TF3313_0774 2040a0bff7fa904c46c36d381eff2409 341 SUPERFAMILY SSF55068 23 178 1.27E-64 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 TF3313_0774 2040a0bff7fa904c46c36d381eff2409 341 Gene3D G3DSA:2.170.150.20 195 341 4.4E-59 T 11-10-2018 TF3313_0774 2040a0bff7fa904c46c36d381eff2409 341 Pfam PF01641 SelR domain 205 324 5.3E-49 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 TF3313_0774 2040a0bff7fa904c46c36d381eff2409 341 Pfam PF01625 Peptide methionine sulfoxide reductase 27 177 6.4E-62 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 TF3313_0774 2040a0bff7fa904c46c36d381eff2409 341 SUPERFAMILY SSF51316 198 338 8.89E-60 T 11-10-2018 IPR011057 Mss4-like superfamily TF3313_0774 2040a0bff7fa904c46c36d381eff2409 341 Gene3D G3DSA:3.30.1060.10 9 189 9.1E-66 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 TF3313_0774 2040a0bff7fa904c46c36d381eff2409 341 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 200 333 1.4E-62 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 TF3313_0774 2040a0bff7fa904c46c36d381eff2409 341 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 198 325 37.058 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 TF3313_0842 1ed9ce9e776b782b3c671ac15e2d1ab5 263 Pfam PF02654 Cobalamin-5-phosphate synthase 8 252 5.2E-52 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 TF3313_0842 1ed9ce9e776b782b3c671ac15e2d1ab5 263 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 1 251 5.3E-34 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 TF3313_0842 1ed9ce9e776b782b3c671ac15e2d1ab5 263 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 263 40.268 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 TF3313_1362 b3b8c4918953e95a12d073b6029a4232 249 SMART SM00382 32 248 3.4E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_1362 b3b8c4918953e95a12d073b6029a4232 249 Pfam PF00005 ABC transporter 24 169 4.5E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TF3313_1362 b3b8c4918953e95a12d073b6029a4232 249 Gene3D G3DSA:3.40.50.300 6 244 4.6E-64 T 11-10-2018 TF3313_1362 b3b8c4918953e95a12d073b6029a4232 249 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 8 244 3.3E-110 T 11-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 TF3313_1362 b3b8c4918953e95a12d073b6029a4232 249 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TF3313_1362 b3b8c4918953e95a12d073b6029a4232 249 SUPERFAMILY SSF52540 6 238 3.08E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0264 ce1793bd4a4a37a9884e8a6c2288ebba 436 SUPERFAMILY SSF103473 17 433 8.37E-30 T 11-10-2018 IPR036259 MFS transporter superfamily TF3313_0264 ce1793bd4a4a37a9884e8a6c2288ebba 436 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 14 428 7.6E-193 T 11-10-2018 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 TF3313_0264 ce1793bd4a4a37a9884e8a6c2288ebba 436 Gene3D G3DSA:1.20.1250.20 12 230 3.3E-53 T 11-10-2018 TF3313_0264 ce1793bd4a4a37a9884e8a6c2288ebba 436 Gene3D G3DSA:1.20.1250.20 231 431 5.0E-42 T 11-10-2018 TF3313_0264 ce1793bd4a4a37a9884e8a6c2288ebba 436 Pfam PF07690 Major Facilitator Superfamily 22 383 3.3E-19 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TF3313_0753 e8daef72f45c099ba4f310c7a8d82303 259 Pfam PF01569 PAP2 superfamily 128 227 1.3E-15 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase TF3313_0753 e8daef72f45c099ba4f310c7a8d82303 259 PIRSF PIRSF000897 1 259 3.4E-97 T 11-10-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 TF3313_0753 e8daef72f45c099ba4f310c7a8d82303 259 SMART SM00014 114 226 3.0E-24 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase TF3313_0753 e8daef72f45c099ba4f310c7a8d82303 259 PRINTS PR00483 Bacterial acid phosphatase class A signature 223 241 2.0E-52 T 11-10-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 TF3313_0753 e8daef72f45c099ba4f310c7a8d82303 259 PRINTS PR00483 Bacterial acid phosphatase class A signature 66 85 2.0E-52 T 11-10-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 TF3313_0753 e8daef72f45c099ba4f310c7a8d82303 259 PRINTS PR00483 Bacterial acid phosphatase class A signature 131 149 2.0E-52 T 11-10-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 TF3313_0753 e8daef72f45c099ba4f310c7a8d82303 259 PRINTS PR00483 Bacterial acid phosphatase class A signature 157 183 2.0E-52 T 11-10-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 TF3313_0753 e8daef72f45c099ba4f310c7a8d82303 259 PRINTS PR00483 Bacterial acid phosphatase class A signature 189 213 2.0E-52 T 11-10-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 TF3313_0753 e8daef72f45c099ba4f310c7a8d82303 259 Gene3D G3DSA:1.20.144.10 19 248 6.5E-77 T 11-10-2018 TF3313_0753 e8daef72f45c099ba4f310c7a8d82303 259 SUPERFAMILY SSF48317 26 242 9.68E-41 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily TF3313_0753 e8daef72f45c099ba4f310c7a8d82303 259 ProSitePatterns PS01157 Class A bacterial acid phosphatases signature. 161 168 - T 11-10-2018 IPR018296 Acid phosphatase, class A, bacterial, conserved site GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 TF3313_1203 c8e19885f88357180f5532feaf608657 187 Hamap MF_00040 Ribosome-recycling factor [frr]. 6 187 24.81 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 TF3313_1203 c8e19885f88357180f5532feaf608657 187 Gene3D G3DSA:3.30.1360.40 34 108 8.3E-61 T 11-10-2018 TF3313_1203 c8e19885f88357180f5532feaf608657 187 TIGRFAM TIGR00496 frr: ribosome recycling factor 14 187 9.2E-59 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 TF3313_1203 c8e19885f88357180f5532feaf608657 187 Gene3D G3DSA:1.10.132.20 15 184 8.3E-61 T 11-10-2018 TF3313_1203 c8e19885f88357180f5532feaf608657 187 Pfam PF01765 Ribosome recycling factor 24 185 4.7E-59 T 11-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 TF3313_1203 c8e19885f88357180f5532feaf608657 187 SUPERFAMILY SSF55194 7 186 4.58E-62 T 11-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 TF3313_0008 1c1b268acd61e15b45c0735c146e17b7 399 SMART SM00825 Beta-ketoacyl synthase 8 397 1.1E-11 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain TF3313_0008 1c1b268acd61e15b45c0735c146e17b7 399 SUPERFAMILY SSF53901 205 395 1.55E-59 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TF3313_0008 1c1b268acd61e15b45c0735c146e17b7 399 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 150 168 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 TF3313_0008 1c1b268acd61e15b45c0735c146e17b7 399 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 244 355 2.0E-27 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal TF3313_0008 1c1b268acd61e15b45c0735c146e17b7 399 SUPERFAMILY SSF53901 1 241 7.68E-45 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TF3313_0008 1c1b268acd61e15b45c0735c146e17b7 399 Gene3D G3DSA:3.40.47.10 1 249 7.3E-51 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TF3313_0008 1c1b268acd61e15b45c0735c146e17b7 399 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 236 1.3E-28 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal TF3313_0008 1c1b268acd61e15b45c0735c146e17b7 399 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 145 161 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site TF3313_0008 1c1b268acd61e15b45c0735c146e17b7 399 Gene3D G3DSA:3.40.47.10 250 398 4.1E-41 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TF3313_1064 e8324e1f1de409efe02c9b6c6f043b4a 118 Pfam PF00581 Rhodanese-like domain 2 69 1.1E-9 T 11-10-2018 IPR001763 Rhodanese-like domain TF3313_1064 e8324e1f1de409efe02c9b6c6f043b4a 118 SUPERFAMILY SSF52821 2 71 5.24E-17 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TF3313_1064 e8324e1f1de409efe02c9b6c6f043b4a 118 Gene3D G3DSA:3.40.250.10 1 87 4.8E-19 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TF3313_1541 47a720f0eb254331eab8703c053e6945 400 SUPERFAMILY SSF53383 3 397 7.98E-131 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TF3313_1541 47a720f0eb254331eab8703c053e6945 400 Gene3D G3DSA:3.40.640.10 35 291 1.6E-169 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TF3313_1541 47a720f0eb254331eab8703c053e6945 400 Gene3D G3DSA:3.90.1150.10 7 392 1.6E-169 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TF3313_1541 47a720f0eb254331eab8703c053e6945 400 PIRSF PIRSF005572 21 399 6.3E-53 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 TF3313_1541 47a720f0eb254331eab8703c053e6945 400 Pfam PF00266 Aminotransferase class-V 24 389 6.1E-145 T 11-10-2018 IPR000192 Aminotransferase class V domain TF3313_1541 47a720f0eb254331eab8703c053e6945 400 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 6 400 9.3E-171 T 11-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 TF3313_2380 6fd05bc972b66c489515e156800bbeaa 395 Gene3D G3DSA:3.90.1150.10 38 385 5.2E-148 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TF3313_2380 6fd05bc972b66c489515e156800bbeaa 395 Pfam PF00155 Aminotransferase class I and II 43 384 3.6E-60 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TF3313_2380 6fd05bc972b66c489515e156800bbeaa 395 Gene3D G3DSA:3.40.640.10 58 292 5.2E-148 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TF3313_2380 6fd05bc972b66c489515e156800bbeaa 395 SUPERFAMILY SSF53383 11 392 1.0E-114 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TF3313_2380 6fd05bc972b66c489515e156800bbeaa 395 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 239 248 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 TF3313_2846 0a1b665372a378adc798ea5a3c1be741 153 Pfam PF00717 Peptidase S24-like 66 136 3.8E-7 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C TF3313_2846 0a1b665372a378adc798ea5a3c1be741 153 SUPERFAMILY SSF51306 22 151 3.14E-13 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily TF3313_2846 0a1b665372a378adc798ea5a3c1be741 153 Gene3D G3DSA:2.10.109.10 33 153 1.5E-6 T 11-10-2018 TF3313_1945 12730d6b9ce4ee0067c0f2198eb76096 539 SUPERFAMILY SSF52540 295 528 1.54E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1945 12730d6b9ce4ee0067c0f2198eb76096 539 Pfam PF00005 ABC transporter 18 184 9.6E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TF3313_1945 12730d6b9ce4ee0067c0f2198eb76096 539 Gene3D G3DSA:3.40.50.300 281 534 4.4E-36 T 11-10-2018 TF3313_1945 12730d6b9ce4ee0067c0f2198eb76096 539 SUPERFAMILY SSF52540 2 256 2.38E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1945 12730d6b9ce4ee0067c0f2198eb76096 539 Pfam PF00005 ABC transporter 336 466 2.8E-7 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TF3313_1945 12730d6b9ce4ee0067c0f2198eb76096 539 Pfam PF12848 ABC transporter 223 304 7.6E-20 T 11-10-2018 IPR032781 ABC-transporter extension domain TF3313_1945 12730d6b9ce4ee0067c0f2198eb76096 539 Gene3D G3DSA:3.40.50.300 8 280 3.5E-64 T 11-10-2018 TF3313_1945 12730d6b9ce4ee0067c0f2198eb76096 539 SMART SM00382 26 231 3.6E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_1930 d4e5839badd6ea7571b8ccf1e22737ac 343 Gene3D G3DSA:1.25.40.390 2 342 7.7E-50 T 11-10-2018 TF3313_1930 d4e5839badd6ea7571b8ccf1e22737ac 343 Pfam PF14322 Starch-binding associating with outer membrane 13 159 5.8E-12 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_1930 d4e5839badd6ea7571b8ccf1e22737ac 343 SUPERFAMILY SSF48452 5 342 2.15E-46 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0783 263bb1eb074ca3943f147432eb1d488b 505 SUPERFAMILY SSF56954 8 479 1.96E-64 T 11-10-2018 TF3313_0783 263bb1eb074ca3943f147432eb1d488b 505 Pfam PF02321 Outer membrane efflux protein 294 480 1.3E-23 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TF3313_0783 263bb1eb074ca3943f147432eb1d488b 505 Pfam PF02321 Outer membrane efflux protein 37 272 7.8E-17 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TF3313_0783 263bb1eb074ca3943f147432eb1d488b 505 Gene3D G3DSA:1.20.1600.10 26 481 5.8E-71 T 11-10-2018 TF3313_0388 4a6c9e0686ea761ef76eec04fb24ee42 452 SMART SM00729 156 373 3.6E-47 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TF3313_0388 4a6c9e0686ea761ef76eec04fb24ee42 452 Pfam PF01938 TRAM domain 389 450 5.5E-16 T 11-10-2018 IPR002792 TRAM domain TF3313_0388 4a6c9e0686ea761ef76eec04fb24ee42 452 Gene3D G3DSA:3.80.30.20 155 391 6.8E-86 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TF3313_0388 4a6c9e0686ea761ef76eec04fb24ee42 452 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 15 450 1.7E-153 T 11-10-2018 TF3313_0388 4a6c9e0686ea761ef76eec04fb24ee42 452 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 15 447 2.6E-133 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 TF3313_0388 4a6c9e0686ea761ef76eec04fb24ee42 452 Pfam PF00919 Uncharacterized protein family UPF0004 16 112 1.4E-30 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 TF3313_0388 4a6c9e0686ea761ef76eec04fb24ee42 452 Gene3D G3DSA:3.40.50.12160 14 151 2.7E-33 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily TF3313_0388 4a6c9e0686ea761ef76eec04fb24ee42 452 Pfam PF04055 Radical SAM superfamily 160 333 5.6E-27 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TF3313_0388 4a6c9e0686ea761ef76eec04fb24ee42 452 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 160 180 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 TF3313_0388 4a6c9e0686ea761ef76eec04fb24ee42 452 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 13 451 67.201 T 11-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 TF3313_0388 4a6c9e0686ea761ef76eec04fb24ee42 452 SUPERFAMILY SSF102114 150 381 4.84E-55 T 11-10-2018 TF3313_0769 beaacef9419bbc553ba07c0cbe548d53 130 Pfam PF13279 Thioesterase-like superfamily 13 118 2.5E-9 T 11-10-2018 TF3313_0769 beaacef9419bbc553ba07c0cbe548d53 130 Gene3D G3DSA:3.10.129.10 2 128 1.3E-28 T 11-10-2018 TF3313_0769 beaacef9419bbc553ba07c0cbe548d53 130 PIRSF PIRSF003230 1 124 4.5E-21 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 TF3313_0769 beaacef9419bbc553ba07c0cbe548d53 130 SUPERFAMILY SSF54637 1 118 3.74E-27 T 11-10-2018 IPR029069 HotDog domain superfamily TF3313_0425 769b95426a56f6b3a2ed28614fc16eca 809 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 103 453 1.2E-75 T 11-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 TF3313_0425 769b95426a56f6b3a2ed28614fc16eca 809 Pfam PF12161 HsdM N-terminal domain 8 119 1.8E-14 T 11-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain TF3313_0425 769b95426a56f6b3a2ed28614fc16eca 809 Gene3D G3DSA:1.20.1260.30 51 154 1.4E-5 T 11-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily TF3313_0425 769b95426a56f6b3a2ed28614fc16eca 809 Gene3D G3DSA:1.20.1260.30 1 50 2.5E-16 T 11-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily TF3313_0425 769b95426a56f6b3a2ed28614fc16eca 809 Pfam PF02384 N-6 DNA Methylase 136 446 1.8E-103 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 TF3313_0425 769b95426a56f6b3a2ed28614fc16eca 809 Gene3D G3DSA:3.40.50.150 158 441 4.5E-83 T 11-10-2018 TF3313_0425 769b95426a56f6b3a2ed28614fc16eca 809 SUPERFAMILY SSF53335 6 489 6.85E-127 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_0425 769b95426a56f6b3a2ed28614fc16eca 809 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 260 272 5.3E-14 T 11-10-2018 TF3313_0425 769b95426a56f6b3a2ed28614fc16eca 809 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 160 176 5.3E-14 T 11-10-2018 TF3313_0425 769b95426a56f6b3a2ed28614fc16eca 809 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 188 202 5.3E-14 T 11-10-2018 TF3313_2534 3c1c453a3fe70bd172f2f17bc9e2f85f 385 SUPERFAMILY SSF50969 83 172 7.46E-7 T 11-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like TF3313_2534 3c1c453a3fe70bd172f2f17bc9e2f85f 385 Pfam PF17170 6-bladed beta-propeller 11 327 1.8E-35 T 11-10-2018 TF3313_2934 0bc041f6a548d7d4017c5656b90c3ab6 198 Pfam PF01612 3'-5' exonuclease 28 195 5.9E-22 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 TF3313_2934 0bc041f6a548d7d4017c5656b90c3ab6 198 Gene3D G3DSA:3.30.420.10 15 197 2.7E-44 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TF3313_2934 0bc041f6a548d7d4017c5656b90c3ab6 198 SMART SM00474 27 198 7.9E-16 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 TF3313_2934 0bc041f6a548d7d4017c5656b90c3ab6 198 SUPERFAMILY SSF53098 16 195 4.38E-41 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TF3313_1205 ebb169f87afba43364946c9ac09bddfc 441 Gene3D G3DSA:1.10.3550.10 114 435 2.2E-129 T 11-10-2018 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal TF3313_1205 ebb169f87afba43364946c9ac09bddfc 441 Gene3D G3DSA:1.10.3410.10 235 354 2.2E-129 T 11-10-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily KEGG: 00230+3.1.5.1 TF3313_1205 ebb169f87afba43364946c9ac09bddfc 441 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 23 434 5.5E-109 T 11-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 TF3313_1205 ebb169f87afba43364946c9ac09bddfc 441 SMART SM00471 57 256 1.8E-4 T 11-10-2018 IPR003607 HD/PDEase domain TF3313_1205 ebb169f87afba43364946c9ac09bddfc 441 Gene3D G3DSA:1.10.3210.10 1 234 2.2E-129 T 11-10-2018 TF3313_1205 ebb169f87afba43364946c9ac09bddfc 441 Pfam PF13286 Phosphohydrolase-associated domain 335 432 8.8E-7 T 11-10-2018 IPR026875 Phosphohydrolase-associated domain TF3313_1205 ebb169f87afba43364946c9ac09bddfc 441 Pfam PF01966 HD domain 61 165 2.8E-7 T 11-10-2018 IPR006674 HD domain TF3313_1205 ebb169f87afba43364946c9ac09bddfc 441 SUPERFAMILY SSF109604 17 434 5.73E-64 T 11-10-2018 TF3313_1797 fd0d8967c165de4a9c3bb8de97e68e63 356 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 174 205 - T 11-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 TF3313_1797 fd0d8967c165de4a9c3bb8de97e68e63 356 SMART SM00922 127 224 2.3E-21 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal TF3313_1797 fd0d8967c165de4a9c3bb8de97e68e63 356 Pfam PF13378 Enolase C-terminal domain-like 130 322 6.2E-26 T 11-10-2018 IPR029065 Enolase C-terminal domain-like TF3313_1797 fd0d8967c165de4a9c3bb8de97e68e63 356 SUPERFAMILY SSF51604 115 333 2.75E-53 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily TF3313_1797 fd0d8967c165de4a9c3bb8de97e68e63 356 Gene3D G3DSA:3.20.20.120 103 340 1.1E-66 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily TF3313_1797 fd0d8967c165de4a9c3bb8de97e68e63 356 Gene3D G3DSA:3.30.390.10 1 102 1.0E-25 T 11-10-2018 IPR029017 Enolase-like, N-terminal TF3313_1797 fd0d8967c165de4a9c3bb8de97e68e63 356 SUPERFAMILY SSF54826 1 100 3.53E-19 T 11-10-2018 TF3313_2518 d4640ee9e3f424842ac9fd1b1d12b3d4 400 Pfam PF13432 Tetratricopeptide repeat 250 312 1.0E-7 T 11-10-2018 TF3313_2518 d4640ee9e3f424842ac9fd1b1d12b3d4 400 Gene3D G3DSA:1.25.40.10 247 385 4.7E-25 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2518 d4640ee9e3f424842ac9fd1b1d12b3d4 400 SUPERFAMILY SSF48452 128 313 1.02E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2518 d4640ee9e3f424842ac9fd1b1d12b3d4 400 SUPERFAMILY SSF48452 292 386 1.14E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2518 d4640ee9e3f424842ac9fd1b1d12b3d4 400 Gene3D G3DSA:1.25.40.10 125 246 1.4E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2518 d4640ee9e3f424842ac9fd1b1d12b3d4 400 SMART SM00028 338 371 350.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2518 d4640ee9e3f424842ac9fd1b1d12b3d4 400 SMART SM00028 278 312 0.0019 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2518 d4640ee9e3f424842ac9fd1b1d12b3d4 400 SMART SM00028 128 161 260.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2518 d4640ee9e3f424842ac9fd1b1d12b3d4 400 SMART SM00028 244 277 19.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1029 bf38e6c91e3052b771a9529fc1ca3dfc 148 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 146 34.094 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 TF3313_1029 bf38e6c91e3052b771a9529fc1ca3dfc 148 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 145 5.2E-57 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 TF3313_1029 bf38e6c91e3052b771a9529fc1ca3dfc 148 SUPERFAMILY SSF69500 1 146 1.09E-55 T 11-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily TF3313_1029 bf38e6c91e3052b771a9529fc1ca3dfc 148 Gene3D G3DSA:3.50.80.10 1 148 2.2E-59 T 11-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily TF3313_1029 bf38e6c91e3052b771a9529fc1ca3dfc 148 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 146 1.6E-56 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 TF3313_2445 12f90531a57ed938f93286bc96dc129c 320 SUPERFAMILY SSF53671 10 315 3.93E-59 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TF3313_2445 12f90531a57ed938f93286bc96dc129c 320 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 3 159 4.3E-28 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 TF3313_2445 12f90531a57ed938f93286bc96dc129c 320 Gene3D G3DSA:3.40.50.1370 2 313 2.5E-144 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TF3313_2445 12f90531a57ed938f93286bc96dc129c 320 Gene3D G3DSA:3.40.50.1370 149 300 2.5E-144 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TF3313_2445 12f90531a57ed938f93286bc96dc129c 320 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 181 310 4.0E-21 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 TF3313_2445 12f90531a57ed938f93286bc96dc129c 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 270 275 4.1E-5 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TF3313_2445 12f90531a57ed938f93286bc96dc129c 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 32 54 4.1E-5 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TF3313_2445 12f90531a57ed938f93286bc96dc129c 320 PRINTS PR00101 Aspartate carbamoyltransferase signature 145 162 4.1E-5 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TF3313_2445 12f90531a57ed938f93286bc96dc129c 320 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 275 9.1E-13 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TF3313_2445 12f90531a57ed938f93286bc96dc129c 320 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 42 61 9.1E-13 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TF3313_2445 12f90531a57ed938f93286bc96dc129c 320 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 278 301 9.1E-13 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TF3313_2494 b51049d51c28aefbd5e8933d07d75d0b 449 PIRSF PIRSF006603 3 449 1.3E-92 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TF3313_2494 b51049d51c28aefbd5e8933d07d75d0b 449 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 420 1.2E-64 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TF3313_2494 b51049d51c28aefbd5e8933d07d75d0b 449 Pfam PF01554 MatE 266 406 6.9E-25 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TF3313_2494 b51049d51c28aefbd5e8933d07d75d0b 449 Pfam PF01554 MatE 25 186 3.1E-26 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TF3313_0134 2fdb1259da845c348ea04ea7205cd6b4 164 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 74 153 2.9E-33 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 TF3313_0134 2fdb1259da845c348ea04ea7205cd6b4 164 Gene3D G3DSA:1.10.10.10 71 156 4.0E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_0134 2fdb1259da845c348ea04ea7205cd6b4 164 SUPERFAMILY SSF46767 73 154 3.27E-31 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 TF3313_0134 2fdb1259da845c348ea04ea7205cd6b4 164 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 75 154 1.6E-31 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 TF3313_0134 2fdb1259da845c348ea04ea7205cd6b4 164 SUPERFAMILY SSF53155 3 79 5.49E-18 T 11-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 TF3313_0134 2fdb1259da845c348ea04ea7205cd6b4 164 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 1 70 2.7E-7 T 11-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 TF3313_0134 2fdb1259da845c348ea04ea7205cd6b4 164 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 6 154 41.032 T 11-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 TF3313_0134 2fdb1259da845c348ea04ea7205cd6b4 164 Gene3D G3DSA:3.30.160.70 1 70 3.4E-17 T 11-10-2018 TF3313_0313 be1161ec3043a5704cbcbc415277b39c 300 Gene3D G3DSA:2.10.109.10 36 170 5.7E-21 T 11-10-2018 TF3313_0313 be1161ec3043a5704cbcbc415277b39c 300 Gene3D G3DSA:2.10.109.10 184 300 5.1E-13 T 11-10-2018 TF3313_0313 be1161ec3043a5704cbcbc415277b39c 300 Pfam PF00717 Peptidase S24-like 46 136 8.4E-12 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C TF3313_0313 be1161ec3043a5704cbcbc415277b39c 300 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 27 174 2.4E-20 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TF3313_0313 be1161ec3043a5704cbcbc415277b39c 300 Pfam PF10502 Signal peptidase, peptidase S26 241 280 6.0E-5 T 11-10-2018 IPR019533 Peptidase S26 TF3313_0313 be1161ec3043a5704cbcbc415277b39c 300 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 123 135 7.1E-14 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TF3313_0313 be1161ec3043a5704cbcbc415277b39c 300 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 40 56 7.1E-14 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TF3313_0313 be1161ec3043a5704cbcbc415277b39c 300 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 243 262 7.1E-14 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TF3313_0313 be1161ec3043a5704cbcbc415277b39c 300 SUPERFAMILY SSF51306 38 298 6.8E-43 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily TF3313_0873 8cbdb429536444734e195cfc1c5f4671 410 ProSitePatterns PS00885 EPSP synthase signature 2. 315 333 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 TF3313_0873 8cbdb429536444734e195cfc1c5f4671 410 PIRSF PIRSF000505 1 59 8.0E-10 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 TF3313_0873 8cbdb429536444734e195cfc1c5f4671 410 PIRSF PIRSF000505 58 409 6.8E-107 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 TF3313_0873 8cbdb429536444734e195cfc1c5f4671 410 Gene3D G3DSA:3.65.10.10 59 196 1.5E-44 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 TF3313_0873 8cbdb429536444734e195cfc1c5f4671 410 Gene3D G3DSA:3.65.10.10 20 58 3.9E-6 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 TF3313_0873 8cbdb429536444734e195cfc1c5f4671 410 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 62 401 3.4E-78 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 TF3313_0873 8cbdb429536444734e195cfc1c5f4671 410 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 58 9.6E-6 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 TF3313_0873 8cbdb429536444734e195cfc1c5f4671 410 SUPERFAMILY SSF55205 4 406 7.06E-94 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 TF3313_0873 8cbdb429536444734e195cfc1c5f4671 410 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 9 407 25.0 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 TF3313_0873 8cbdb429536444734e195cfc1c5f4671 410 Gene3D G3DSA:3.65.10.10 201 404 6.7E-53 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 TF3313_2619 9d1d2d89573c586d6f60bb62ce90e8b1 168 Gene3D G3DSA:2.60.200.20 50 168 3.1E-19 T 11-10-2018 TF3313_2619 9d1d2d89573c586d6f60bb62ce90e8b1 168 Pfam PF13717 zinc-ribbon domain 4 35 9.5E-8 T 11-10-2018 IPR011723 Zinc finger/thioredoxin putative TF3313_2619 9d1d2d89573c586d6f60bb62ce90e8b1 168 Pfam PF00498 FHA domain 85 160 1.2E-12 T 11-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 TF3313_2619 9d1d2d89573c586d6f60bb62ce90e8b1 168 SUPERFAMILY SSF49879 54 166 1.51E-20 T 11-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 TF3313_1820 c45024313b04c0203d14a854b2c83c94 277 Pfam PF01261 Xylose isomerase-like TIM barrel 21 234 5.3E-34 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain TF3313_1820 c45024313b04c0203d14a854b2c83c94 277 Gene3D G3DSA:3.20.20.150 1 277 8.6E-95 T 11-10-2018 TF3313_1820 c45024313b04c0203d14a854b2c83c94 277 SMART SM00518 3 275 3.2E-99 T 11-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 TF3313_1820 c45024313b04c0203d14a854b2c83c94 277 SUPERFAMILY SSF51658 3 275 9.69E-89 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily TF3313_1820 c45024313b04c0203d14a854b2c83c94 277 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 172 179 - T 11-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 TF3313_1820 c45024313b04c0203d14a854b2c83c94 277 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 210 226 - T 11-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 TF3313_1820 c45024313b04c0203d14a854b2c83c94 277 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 4 272 4.0E-92 T 11-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 TF3313_1820 c45024313b04c0203d14a854b2c83c94 277 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 275 40.055 T 11-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 TF3313_0135 3e70b59a4104642e46a6d1a4edac551d 133 Pfam PF09912 Uncharacterized protein conserved in bacteria (DUF2141) 28 126 4.1E-10 T 11-10-2018 IPR018673 Protein of unknown function DUF2141 TF3313_2289 cfbc5fdefed8eeb824d843a0b04702c0 546 Pfam PF03577 Peptidase family C69 22 440 6.4E-104 T 11-10-2018 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 TF3313_2289 cfbc5fdefed8eeb824d843a0b04702c0 546 Gene3D G3DSA:3.60.60.10 23 225 4.3E-6 T 11-10-2018 TF3313_0195 093e95a26019ef8c866873ddfdaf1beb 154 SUPERFAMILY SSF55186 19 151 6.8E-32 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 TF3313_0195 093e95a26019ef8c866873ddfdaf1beb 154 Gene3D G3DSA:3.30.54.20 82 124 1.4E-38 T 11-10-2018 TF3313_0195 093e95a26019ef8c866873ddfdaf1beb 154 SMART SM00863 108 150 7.5E-9 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TF3313_0195 093e95a26019ef8c866873ddfdaf1beb 154 Gene3D G3DSA:3.30.980.10 19 151 1.4E-38 T 11-10-2018 TF3313_0195 093e95a26019ef8c866873ddfdaf1beb 154 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 108 147 3.7E-11 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TF3313_2047 582f1c079d55b134e21b7321da1d30a0 766 SUPERFAMILY SSF49464 27 127 5.3E-11 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_2047 582f1c079d55b134e21b7321da1d30a0 766 Pfam PF13715 CarboxypepD_reg-like domain 55 117 6.9E-9 T 11-10-2018 TF3313_2047 582f1c079d55b134e21b7321da1d30a0 766 SUPERFAMILY SSF56935 169 741 7.33E-5 T 11-10-2018 TF3313_1839 e2aa64203e55f4e97963fc79d1956c56 234 PIRSF PIRSF005917 1 231 9.4E-46 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 TF3313_1839 e2aa64203e55f4e97963fc79d1956c56 234 Gene3D G3DSA:3.40.1010.10 1 121 8.2E-42 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 TF3313_1839 e2aa64203e55f4e97963fc79d1956c56 234 SUPERFAMILY SSF53790 4 232 1.44E-63 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 TF3313_1839 e2aa64203e55f4e97963fc79d1956c56 234 Gene3D G3DSA:3.30.950.10 122 234 2.1E-47 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 TF3313_1514 78991ad445b02fdd217578bdd4d7cf38 722 Gene3D G3DSA:3.40.50.1820 473 718 1.5E-208 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TF3313_1514 78991ad445b02fdd217578bdd4d7cf38 722 SUPERFAMILY SSF53474 474 722 2.43E-77 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TF3313_1514 78991ad445b02fdd217578bdd4d7cf38 722 Pfam PF00326 Prolyl oligopeptidase family 524 722 4.1E-55 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 TF3313_1514 78991ad445b02fdd217578bdd4d7cf38 722 SUPERFAMILY SSF82171 59 467 1.44E-62 T 11-10-2018 TF3313_1514 78991ad445b02fdd217578bdd4d7cf38 722 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 97 439 1.5E-100 T 11-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 TF3313_1514 78991ad445b02fdd217578bdd4d7cf38 722 Gene3D G3DSA:2.140.10.30 86 472 1.5E-208 T 11-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily TF3313_0398 f3a9e8b8507d66b189400b3f780df884 418 Pfam PF02687 FtsX-like permease family 315 407 1.3E-14 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TF3313_0398 f3a9e8b8507d66b189400b3f780df884 418 Pfam PF12704 MacB-like periplasmic core domain 21 247 9.7E-21 T 11-10-2018 IPR025857 MacB-like periplasmic core domain TF3313_1195 8cac13a9996dc71f2e43bf60444034fa 243 SUPERFAMILY SSF55347 105 209 4.58E-22 T 11-10-2018 TF3313_1195 8cac13a9996dc71f2e43bf60444034fa 243 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 106 236 1.2E-32 T 11-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TF3313_1195 8cac13a9996dc71f2e43bf60444034fa 243 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 103 2.8E-15 T 11-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TF3313_1195 8cac13a9996dc71f2e43bf60444034fa 243 Gene3D G3DSA:3.40.50.720 2 229 2.8E-73 T 11-10-2018 TF3313_1195 8cac13a9996dc71f2e43bf60444034fa 243 Gene3D G3DSA:3.30.360.10 104 207 2.8E-73 T 11-10-2018 TF3313_1195 8cac13a9996dc71f2e43bf60444034fa 243 SUPERFAMILY SSF51735 1 237 5.94E-25 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_1195 8cac13a9996dc71f2e43bf60444034fa 243 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 37 236 1.7E-39 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TF3313_1195 8cac13a9996dc71f2e43bf60444034fa 243 PIRSF PIRSF000161 1 239 1.4E-60 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TF3313_0734 d04783a6a6827d251335c43d18a97c57 351 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 2 341 1.5E-105 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 TF3313_0734 d04783a6a6827d251335c43d18a97c57 351 PIRSF PIRSF001455 2 349 1.0E-105 T 11-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 TF3313_0734 d04783a6a6827d251335c43d18a97c57 351 Gene3D G3DSA:3.40.50.1970 1 156 3.6E-49 T 11-10-2018 TF3313_0734 d04783a6a6827d251335c43d18a97c57 351 Gene3D G3DSA:1.20.1090.10 158 346 3.0E-49 T 11-10-2018 TF3313_0734 d04783a6a6827d251335c43d18a97c57 351 SUPERFAMILY SSF56796 2 342 3.27E-85 T 11-10-2018 TF3313_0734 d04783a6a6827d251335c43d18a97c57 351 Pfam PF01761 3-dehydroquinate synthase 52 311 3.4E-85 T 11-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 TF3313_1878 942a57dd9a00be774d5502470ce59288 435 Gene3D G3DSA:1.20.1250.20 207 429 2.2E-40 T 11-10-2018 TF3313_1878 942a57dd9a00be774d5502470ce59288 435 SUPERFAMILY SSF103473 1 421 2.62E-30 T 11-10-2018 IPR036259 MFS transporter superfamily TF3313_1878 942a57dd9a00be774d5502470ce59288 435 Pfam PF07690 Major Facilitator Superfamily 12 387 7.1E-17 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TF3313_1878 942a57dd9a00be774d5502470ce59288 435 Gene3D G3DSA:1.20.1250.20 5 206 2.3E-29 T 11-10-2018 TF3313_0744 8194e94e23a364c7372e1240736ca844 412 Hamap MF_00372 Imidazolonepropionase [hutI]. 3 411 42.803 T 11-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TF3313_0744 8194e94e23a364c7372e1240736ca844 412 SUPERFAMILY SSF51338 3 66 1.85E-14 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TF3313_0744 8194e94e23a364c7372e1240736ca844 412 TIGRFAM TIGR01224 hutI: imidazolonepropionase 33 410 1.2E-141 T 11-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TF3313_0744 8194e94e23a364c7372e1240736ca844 412 Pfam PF07969 Amidohydrolase family 119 411 1.1E-21 T 11-10-2018 IPR013108 Amidohydrolase 3 TF3313_0744 8194e94e23a364c7372e1240736ca844 412 Gene3D G3DSA:3.20.20.140 74 371 1.4E-166 T 11-10-2018 TF3313_0744 8194e94e23a364c7372e1240736ca844 412 SUPERFAMILY SSF51556 73 372 7.19E-83 T 11-10-2018 IPR032466 Metal-dependent hydrolase TF3313_0744 8194e94e23a364c7372e1240736ca844 412 Gene3D G3DSA:2.30.40.10 7 409 1.4E-166 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TF3313_1249 c7033afc2971f684ff292cf718d12c86 299 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 4 295 25.265 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 TF3313_1249 c7033afc2971f684ff292cf718d12c86 299 Gene3D G3DSA:3.40.50.300 8 282 2.9E-86 T 11-10-2018 TF3313_1249 c7033afc2971f684ff292cf718d12c86 299 SUPERFAMILY SSF52540 1 260 1.54E-9 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1249 c7033afc2971f684ff292cf718d12c86 299 Pfam PF01715 IPP transferase 37 278 4.9E-68 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 TF3313_1249 c7033afc2971f684ff292cf718d12c86 299 Gene3D G3DSA:1.10.20.140 111 182 2.9E-86 T 11-10-2018 TF3313_1249 c7033afc2971f684ff292cf718d12c86 299 SUPERFAMILY SSF52540 4 152 2.84E-14 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1249 c7033afc2971f684ff292cf718d12c86 299 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 5 286 1.5E-76 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 TF3313_1855 e4abbf8783c7c0cde6eb96d97a0fcaa4 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 7.8E-29 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1855 e4abbf8783c7c0cde6eb96d97a0fcaa4 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 7.8E-29 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1855 e4abbf8783c7c0cde6eb96d97a0fcaa4 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 7.8E-29 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1855 e4abbf8783c7c0cde6eb96d97a0fcaa4 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 7.8E-29 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1855 e4abbf8783c7c0cde6eb96d97a0fcaa4 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 7.8E-29 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1855 e4abbf8783c7c0cde6eb96d97a0fcaa4 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 7.8E-29 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1855 e4abbf8783c7c0cde6eb96d97a0fcaa4 254 SUPERFAMILY SSF51735 3 236 2.52E-70 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_1855 e4abbf8783c7c0cde6eb96d97a0fcaa4 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TF3313_1855 e4abbf8783c7c0cde6eb96d97a0fcaa4 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 184 0.0025 T 11-10-2018 TF3313_1855 e4abbf8783c7c0cde6eb96d97a0fcaa4 254 Pfam PF00106 short chain dehydrogenase 3 191 5.9E-59 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1855 e4abbf8783c7c0cde6eb96d97a0fcaa4 254 PIRSF PIRSF000126 1 227 1.3E-55 T 11-10-2018 TF3313_1855 e4abbf8783c7c0cde6eb96d97a0fcaa4 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.5E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1855 e4abbf8783c7c0cde6eb96d97a0fcaa4 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.5E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1855 e4abbf8783c7c0cde6eb96d97a0fcaa4 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.5E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1855 e4abbf8783c7c0cde6eb96d97a0fcaa4 254 Gene3D G3DSA:3.40.50.720 2 252 3.4E-72 T 11-10-2018 TF3313_0496 a43c756547085a9e8154962b608d9149 311 Pfam PF07804 HipA-like C-terminal domain 56 277 1.6E-45 T 11-10-2018 IPR012893 HipA-like, C-terminal TF3313_0385 25746cc3c71777b433b2d8fe37e50b7b 512 SUPERFAMILY SSF111283 53 511 3.4E-118 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 TF3313_0385 25746cc3c71777b433b2d8fe37e50b7b 512 PIRSF PIRSF004919 50 512 1.7E-124 T 11-10-2018 IPR025502 TldD TF3313_0385 25746cc3c71777b433b2d8fe37e50b7b 512 Gene3D G3DSA:3.30.2290.10 46 269 3.1E-22 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal TF3313_0385 25746cc3c71777b433b2d8fe37e50b7b 512 Pfam PF01523 Putative modulator of DNA gyrase 70 363 5.6E-61 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 TF3313_1113 e81dff159b8cac69f38473509d9ba8f2 377 Pfam PF10282 Lactonase, 7-bladed beta-propeller 34 374 3.9E-106 T 11-10-2018 IPR019405 Lactonase, 7-bladed beta propeller TF3313_1113 e81dff159b8cac69f38473509d9ba8f2 377 SUPERFAMILY SSF51004 43 374 6.54E-51 T 11-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily TF3313_1113 e81dff159b8cac69f38473509d9ba8f2 377 Gene3D G3DSA:2.130.10.10 28 376 1.2E-129 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TF3313_2950 a17c236381f6c5d880cc946f962f59fc 610 Gene3D G3DSA:3.30.930.10 190 548 3.8E-132 T 11-10-2018 TF3313_2950 a17c236381f6c5d880cc946f962f59fc 610 PRINTS PR00982 Lysyl-tRNA synthetase signature 416 432 8.5E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TF3313_2950 a17c236381f6c5d880cc946f962f59fc 610 PRINTS PR00982 Lysyl-tRNA synthetase signature 247 263 8.5E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TF3313_2950 a17c236381f6c5d880cc946f962f59fc 610 PRINTS PR00982 Lysyl-tRNA synthetase signature 276 289 8.5E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TF3313_2950 a17c236381f6c5d880cc946f962f59fc 610 PRINTS PR00982 Lysyl-tRNA synthetase signature 294 311 8.5E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TF3313_2950 a17c236381f6c5d880cc946f962f59fc 610 PRINTS PR00982 Lysyl-tRNA synthetase signature 231 241 8.5E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TF3313_2950 a17c236381f6c5d880cc946f962f59fc 610 SUPERFAMILY SSF55681 194 532 6.32E-117 T 11-10-2018 TF3313_2950 a17c236381f6c5d880cc946f962f59fc 610 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 38 535 1.9E-189 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TF3313_2950 a17c236381f6c5d880cc946f962f59fc 610 SUPERFAMILY SSF50249 36 179 6.43E-37 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TF3313_2950 a17c236381f6c5d880cc946f962f59fc 610 Pfam PF01336 OB-fold nucleic acid binding domain 87 171 4.0E-19 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 TF3313_2950 a17c236381f6c5d880cc946f962f59fc 610 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 44 534 42.902 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TF3313_2950 a17c236381f6c5d880cc946f962f59fc 610 Pfam PF00152 tRNA synthetases class II (D, K and N) 195 531 2.3E-84 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_2950 a17c236381f6c5d880cc946f962f59fc 610 Gene3D G3DSA:2.40.50.140 33 180 6.5E-38 T 11-10-2018 TF3313_1008 ce5ae40abf748dda7515fe7aab6012c7 532 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 42 342 3.8E-83 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 TF3313_1008 ce5ae40abf748dda7515fe7aab6012c7 532 Gene3D G3DSA:2.30.42.10 87 176 8.7E-75 T 11-10-2018 TF3313_1008 ce5ae40abf748dda7515fe7aab6012c7 532 SMART SM00228 87 160 2.1E-10 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TF3313_1008 ce5ae40abf748dda7515fe7aab6012c7 532 SUPERFAMILY SSF50156 63 187 2.63E-16 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 TF3313_1008 ce5ae40abf748dda7515fe7aab6012c7 532 Pfam PF03572 Peptidase family S41 189 342 1.9E-48 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 TF3313_1008 ce5ae40abf748dda7515fe7aab6012c7 532 Gene3D G3DSA:3.90.226.10 177 342 8.7E-75 T 11-10-2018 TF3313_1008 ce5ae40abf748dda7515fe7aab6012c7 532 SUPERFAMILY SSF52096 30 342 2.32E-66 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TF3313_1008 ce5ae40abf748dda7515fe7aab6012c7 532 Gene3D G3DSA:3.30.750.44 39 327 8.7E-75 T 11-10-2018 TF3313_1008 ce5ae40abf748dda7515fe7aab6012c7 532 Pfam PF13180 PDZ domain 88 167 1.8E-12 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TF3313_1008 ce5ae40abf748dda7515fe7aab6012c7 532 SMART SM00245 162 343 1.3E-44 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 TF3313_2714 2f4a5baa09ffdad6b6a8300bdcce0465 359 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 3 351 55.686 T 11-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 TF3313_2714 2f4a5baa09ffdad6b6a8300bdcce0465 359 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 341 8.0E-152 T 11-10-2018 IPR016040 NAD(P)-binding domain TF3313_2714 2f4a5baa09ffdad6b6a8300bdcce0465 359 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 3 348 7.1E-174 T 11-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 TF3313_2714 2f4a5baa09ffdad6b6a8300bdcce0465 359 SUPERFAMILY SSF51735 3 347 1.02E-76 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_2714 2f4a5baa09ffdad6b6a8300bdcce0465 359 Gene3D G3DSA:3.40.50.720 5 332 8.0E-165 T 11-10-2018 TF3313_2714 2f4a5baa09ffdad6b6a8300bdcce0465 359 Gene3D G3DSA:3.90.25.10 197 346 8.0E-165 T 11-10-2018 TF3313_0312 689003f530e82085ee9d004aae6b88c5 512 SUPERFAMILY SSF48452 376 459 1.52E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0312 689003f530e82085ee9d004aae6b88c5 512 Pfam PF04932 O-Antigen ligase 68 252 3.4E-15 T 11-10-2018 IPR007016 O-antigen ligase-related TF3313_0312 689003f530e82085ee9d004aae6b88c5 512 Gene3D G3DSA:1.25.40.10 345 507 2.8E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2574 43650b03f37cdcac85445943a2ecc08e 408 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 TF3313_2574 43650b03f37cdcac85445943a2ecc08e 408 Hamap MF_00550 Peptidase T [pepT]. 1 403 54.602 T 11-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 TF3313_2574 43650b03f37cdcac85445943a2ecc08e 408 Pfam PF01546 Peptidase family M20/M25/M40 139 396 5.0E-11 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 TF3313_2574 43650b03f37cdcac85445943a2ecc08e 408 Pfam PF07687 Peptidase dimerisation domain 206 302 5.1E-11 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain TF3313_2574 43650b03f37cdcac85445943a2ecc08e 408 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 177 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 TF3313_2574 43650b03f37cdcac85445943a2ecc08e 408 SUPERFAMILY SSF55031 209 319 2.09E-35 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain TF3313_2574 43650b03f37cdcac85445943a2ecc08e 408 SUPERFAMILY SSF53187 2 400 2.77E-77 T 11-10-2018 TF3313_2574 43650b03f37cdcac85445943a2ecc08e 408 TIGRFAM TIGR01882 peptidase-T: peptidase T 4 404 3.9E-164 T 11-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 TF3313_2574 43650b03f37cdcac85445943a2ecc08e 408 Gene3D G3DSA:3.40.630.10 4 399 1.4E-176 T 11-10-2018 TF3313_2574 43650b03f37cdcac85445943a2ecc08e 408 Gene3D G3DSA:3.30.70.360 209 318 1.4E-176 T 11-10-2018 TF3313_2574 43650b03f37cdcac85445943a2ecc08e 408 PIRSF PIRSF037215 1 407 5.1E-182 T 11-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 TF3313_1384 ef163805867955e5d95e18a1ee0e7e4b 144 TIGRFAM TIGR00576 dut: dUTP diphosphatase 8 143 1.3E-52 T 11-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 TF3313_1384 ef163805867955e5d95e18a1ee0e7e4b 144 Pfam PF00692 dUTPase 12 142 1.0E-32 T 11-10-2018 IPR029054 dUTPase-like TF3313_1384 ef163805867955e5d95e18a1ee0e7e4b 144 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 1 143 33.329 T 11-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 TF3313_1384 ef163805867955e5d95e18a1ee0e7e4b 144 Gene3D G3DSA:2.70.40.10 2 143 3.4E-53 T 11-10-2018 IPR036157 dUTPase-like superfamily TF3313_1384 ef163805867955e5d95e18a1ee0e7e4b 144 SUPERFAMILY SSF51283 5 143 4.71E-52 T 11-10-2018 IPR036157 dUTPase-like superfamily TF3313_1485 212b3e33d64b57cb3b6be3da2cbfb365 576 Gene3D G3DSA:1.20.1560.10 8 326 1.0E-38 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TF3313_1485 212b3e33d64b57cb3b6be3da2cbfb365 576 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TF3313_1485 212b3e33d64b57cb3b6be3da2cbfb365 576 SMART SM00382 363 549 1.0E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_1485 212b3e33d64b57cb3b6be3da2cbfb365 576 SUPERFAMILY SSF90123 18 323 7.19E-46 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TF3313_1485 212b3e33d64b57cb3b6be3da2cbfb365 576 Gene3D G3DSA:3.40.50.300 329 576 1.4E-87 T 11-10-2018 TF3313_1485 212b3e33d64b57cb3b6be3da2cbfb365 576 Pfam PF00664 ABC transporter transmembrane region 23 295 3.7E-23 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TF3313_1485 212b3e33d64b57cb3b6be3da2cbfb365 576 SUPERFAMILY SSF52540 330 573 8.16E-85 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1485 212b3e33d64b57cb3b6be3da2cbfb365 576 Pfam PF00005 ABC transporter 354 503 3.5E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TF3313_0732 dc4a51ffe1b30a69fe4be1da5d424f1e 327 SUPERFAMILY SSF51261 182 302 7.06E-55 T 11-10-2018 IPR011055 Duplicated hybrid motif TF3313_0732 dc4a51ffe1b30a69fe4be1da5d424f1e 327 Pfam PF01551 Peptidase family M23 204 299 1.6E-35 T 11-10-2018 IPR016047 Peptidase M23 TF3313_0732 dc4a51ffe1b30a69fe4be1da5d424f1e 327 Gene3D G3DSA:2.70.70.10 151 305 5.6E-50 T 11-10-2018 IPR011055 Duplicated hybrid motif TF3313_0091 c10598ae65bda393b322556e08180fdf 432 SUPERFAMILY SSF55174 179 285 9.25E-18 T 11-10-2018 TF3313_0091 c10598ae65bda393b322556e08180fdf 432 Pfam PF01479 S4 domain 198 243 2.4E-11 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_0091 c10598ae65bda393b322556e08180fdf 432 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 261 419 9.4E-47 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 TF3313_0091 c10598ae65bda393b322556e08180fdf 432 Gene3D G3DSA:3.10.290.10 195 257 3.5E-21 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TF3313_0091 c10598ae65bda393b322556e08180fdf 432 Gene3D G3DSA:3.30.70.580 258 423 4.8E-52 T 11-10-2018 TF3313_0091 c10598ae65bda393b322556e08180fdf 432 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 295 309 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 TF3313_0091 c10598ae65bda393b322556e08180fdf 432 Pfam PF00849 RNA pseudouridylate synthase 257 389 1.4E-16 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TF3313_0091 c10598ae65bda393b322556e08180fdf 432 SMART SM00363 197 257 7.0E-9 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_0091 c10598ae65bda393b322556e08180fdf 432 Gene3D G3DSA:3.30.70.1560 324 406 4.8E-52 T 11-10-2018 TF3313_0091 c10598ae65bda393b322556e08180fdf 432 SUPERFAMILY SSF55120 253 424 6.0E-39 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TF3313_0962 431fc0c81a37c65a9c26c96b049f2e46 711 Gene3D G3DSA:3.20.70.20 137 674 5.7E-31 T 11-10-2018 TF3313_0962 431fc0c81a37c65a9c26c96b049f2e46 711 Pfam PF03477 ATP cone domain 4 85 2.2E-20 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 TF3313_0962 431fc0c81a37c65a9c26c96b049f2e46 711 TIGRFAM TIGR02827 RNR_anaer_Bdell: anaerobic ribonucleoside-triphosphate reductase 85 690 1.4E-292 T 11-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 TF3313_0962 431fc0c81a37c65a9c26c96b049f2e46 711 SUPERFAMILY SSF51998 138 675 4.39E-72 T 11-10-2018 TF3313_0962 431fc0c81a37c65a9c26c96b049f2e46 711 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 135 689 5.1E-100 T 11-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 TF3313_0366 2ed66572bb16650dbf4665b7a94f1ad6 420 Pfam PF03772 Competence protein 128 396 1.7E-57 T 11-10-2018 IPR004477 ComEC/Rec2-related protein TF3313_0366 2ed66572bb16650dbf4665b7a94f1ad6 420 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 149 326 1.4E-20 T 11-10-2018 IPR004477 ComEC/Rec2-related protein TF3313_2924 61312df4ba80a05defec174ced2fa1d8 456 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 450 9.8E-172 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 TF3313_2924 61312df4ba80a05defec174ced2fa1d8 456 Pfam PF13541 Subunit ChlI of Mg-chelatase 344 428 2.0E-11 T 11-10-2018 TF3313_2924 61312df4ba80a05defec174ced2fa1d8 456 SMART SM00382 89 245 5.7E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_2924 61312df4ba80a05defec174ced2fa1d8 456 PRINTS PR01874 DNA repair protein radA signature 81 109 8.8E-91 T 11-10-2018 TF3313_2924 61312df4ba80a05defec174ced2fa1d8 456 PRINTS PR01874 DNA repair protein radA signature 322 345 8.8E-91 T 11-10-2018 TF3313_2924 61312df4ba80a05defec174ced2fa1d8 456 PRINTS PR01874 DNA repair protein radA signature 121 138 8.8E-91 T 11-10-2018 TF3313_2924 61312df4ba80a05defec174ced2fa1d8 456 PRINTS PR01874 DNA repair protein radA signature 248 274 8.8E-91 T 11-10-2018 TF3313_2924 61312df4ba80a05defec174ced2fa1d8 456 PRINTS PR01874 DNA repair protein radA signature 10 34 8.8E-91 T 11-10-2018 TF3313_2924 61312df4ba80a05defec174ced2fa1d8 456 PRINTS PR01874 DNA repair protein radA signature 174 198 8.8E-91 T 11-10-2018 TF3313_2924 61312df4ba80a05defec174ced2fa1d8 456 PRINTS PR01874 DNA repair protein radA signature 213 241 8.8E-91 T 11-10-2018 TF3313_2924 61312df4ba80a05defec174ced2fa1d8 456 Gene3D G3DSA:3.40.50.300 64 286 7.2E-38 T 11-10-2018 TF3313_2924 61312df4ba80a05defec174ced2fa1d8 456 SUPERFAMILY SSF54211 255 456 6.83E-36 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TF3313_2924 61312df4ba80a05defec174ced2fa1d8 456 SUPERFAMILY SSF52540 67 291 6.86E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2924 61312df4ba80a05defec174ced2fa1d8 456 Hamap MF_01498 DNA repair protein RadA [radA]. 21 455 41.468 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 TF3313_2924 61312df4ba80a05defec174ced2fa1d8 456 Gene3D G3DSA:3.30.230.10 323 456 7.1E-18 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TF3313_2924 61312df4ba80a05defec174ced2fa1d8 456 Pfam PF13481 AAA domain 72 222 1.2E-12 T 11-10-2018 TF3313_2669 a49de5738fc2d2942fd6451834375565 348 Gene3D G3DSA:1.10.150.530 1 64 8.8E-13 T 11-10-2018 TF3313_2669 a49de5738fc2d2942fd6451834375565 348 Pfam PF13394 4Fe-4S single cluster domain 112 196 3.9E-5 T 11-10-2018 TF3313_2669 a49de5738fc2d2942fd6451834375565 348 Gene3D G3DSA:3.20.20.70 68 325 2.5E-92 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_2669 a49de5738fc2d2942fd6451834375565 348 SUPERFAMILY SSF102114 101 310 9.68E-16 T 11-10-2018 TF3313_2669 a49de5738fc2d2942fd6451834375565 348 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 4 340 61.58 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 TF3313_2669 a49de5738fc2d2942fd6451834375565 348 PIRSF PIRSF006004 2 348 1.7E-116 T 11-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 TF3313_2669 a49de5738fc2d2942fd6451834375565 348 Pfam PF04055 Radical SAM superfamily 108 263 9.6E-16 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TF3313_2669 a49de5738fc2d2942fd6451834375565 348 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 344 7.3E-104 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 TF3313_1948 4515ec60eba9f47e168f39c955cb5c11 382 SUPERFAMILY SSF51735 3 376 7.27E-88 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_1948 4515ec60eba9f47e168f39c955cb5c11 382 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 348 1.3E-94 T 11-10-2018 IPR016040 NAD(P)-binding domain TF3313_1948 4515ec60eba9f47e168f39c955cb5c11 382 Gene3D G3DSA:3.40.50.720 4 348 1.7E-121 T 11-10-2018 TF3313_1948 4515ec60eba9f47e168f39c955cb5c11 382 Gene3D G3DSA:3.90.25.10 207 356 1.7E-121 T 11-10-2018 TF3313_1948 4515ec60eba9f47e168f39c955cb5c11 382 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 4 363 2.1E-141 T 11-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 TF3313_0537 6e22404f38a956f8bc7818a108760459 137 SUPERFAMILY SSF54211 14 127 4.55E-12 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TF3313_0537 6e22404f38a956f8bc7818a108760459 137 Pfam PF00825 Ribonuclease P 10 127 7.5E-14 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 TF3313_0537 6e22404f38a956f8bc7818a108760459 137 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 9 130 12.471 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 TF3313_0537 6e22404f38a956f8bc7818a108760459 137 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 33 85 0.004 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 TF3313_0537 6e22404f38a956f8bc7818a108760459 137 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 64 78 - T 11-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 TF3313_0537 6e22404f38a956f8bc7818a108760459 137 Gene3D G3DSA:3.30.230.10 4 131 3.0E-14 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TF3313_0902 801bb68e51b16a91b8461771fc5e4fb1 143 Pfam PF00364 Biotin-requiring enzyme 77 141 4.9E-18 T 11-10-2018 IPR000089 Biotin/lipoyl attachment TF3313_0902 801bb68e51b16a91b8461771fc5e4fb1 143 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 99 116 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TF3313_0902 801bb68e51b16a91b8461771fc5e4fb1 143 SUPERFAMILY SSF51230 66 142 3.27E-21 T 11-10-2018 IPR011053 Single hybrid motif TF3313_0902 801bb68e51b16a91b8461771fc5e4fb1 143 Gene3D G3DSA:2.40.50.100 70 143 4.8E-24 T 11-10-2018 TF3313_1285 5a8815f278f89c1a8653f8d62cd39a81 444 SUPERFAMILY SSF51445 64 396 3.19E-61 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily TF3313_1285 5a8815f278f89c1a8653f8d62cd39a81 444 SMART SM00633 122 388 1.1E-6 T 11-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 TF3313_1285 5a8815f278f89c1a8653f8d62cd39a81 444 Gene3D G3DSA:3.20.20.80 57 387 5.7E-64 T 11-10-2018 TF3313_1285 5a8815f278f89c1a8653f8d62cd39a81 444 Pfam PF00331 Glycosyl hydrolase family 10 114 384 5.1E-30 T 11-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 TF3313_1788 58b544ed7abb38106d5365ae327612d7 124 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 124 22.967 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1788 58b544ed7abb38106d5365ae327612d7 124 Gene3D G3DSA:3.30.1390.10 54 124 5.4E-30 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like TF3313_1788 58b544ed7abb38106d5365ae327612d7 124 Gene3D G3DSA:1.20.5.710 4 53 1.2E-9 T 11-10-2018 TF3313_1788 58b544ed7abb38106d5365ae327612d7 124 SUPERFAMILY SSF54736 53 124 1.92E-24 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like TF3313_1788 58b544ed7abb38106d5365ae327612d7 124 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 58 124 1.9E-30 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1788 58b544ed7abb38106d5365ae327612d7 124 TIGRFAM TIGR00855 L12: ribosomal protein bL12 2 124 1.6E-39 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1788 58b544ed7abb38106d5365ae327612d7 124 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 60 102 8.0E-13 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1788 58b544ed7abb38106d5365ae327612d7 124 SUPERFAMILY SSF48300 4 60 2.49E-12 T 11-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1788 58b544ed7abb38106d5365ae327612d7 124 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 51 3.5E-14 T 11-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_0336 b1f538ccf2f26bd92f939b01441f30ee 457 SMART SM00864 21 213 2.7E-88 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TF3313_0336 b1f538ccf2f26bd92f939b01441f30ee 457 SUPERFAMILY SSF52490 10 213 4.84E-60 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 TF3313_0336 b1f538ccf2f26bd92f939b01441f30ee 457 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 17 381 32.593 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 TF3313_0336 b1f538ccf2f26bd92f939b01441f30ee 457 SMART SM00865 215 340 8.5E-29 T 11-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 TF3313_0336 b1f538ccf2f26bd92f939b01441f30ee 457 SUPERFAMILY SSF55307 215 338 4.12E-30 T 11-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 TF3313_0336 b1f538ccf2f26bd92f939b01441f30ee 457 ProSitePatterns PS01135 FtsZ protein signature 2. 106 127 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 TF3313_0336 b1f538ccf2f26bd92f939b01441f30ee 457 Pfam PF12327 FtsZ family, C-terminal domain 230 332 8.1E-16 T 11-10-2018 IPR024757 Cell division protein FtsZ, C-terminal TF3313_0336 b1f538ccf2f26bd92f939b01441f30ee 457 PRINTS PR00423 Cell division protein FtsZ signature 220 241 2.0E-37 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TF3313_0336 b1f538ccf2f26bd92f939b01441f30ee 457 PRINTS PR00423 Cell division protein FtsZ signature 135 156 2.0E-37 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TF3313_0336 b1f538ccf2f26bd92f939b01441f30ee 457 PRINTS PR00423 Cell division protein FtsZ signature 107 127 2.0E-37 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TF3313_0336 b1f538ccf2f26bd92f939b01441f30ee 457 PRINTS PR00423 Cell division protein FtsZ signature 197 219 2.0E-37 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TF3313_0336 b1f538ccf2f26bd92f939b01441f30ee 457 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 19 353 3.4E-102 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 TF3313_0336 b1f538ccf2f26bd92f939b01441f30ee 457 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 22 182 1.0E-34 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TF3313_0336 b1f538ccf2f26bd92f939b01441f30ee 457 Gene3D G3DSA:3.40.50.1440 18 332 3.5E-103 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 TF3313_1903 4db7a89c7500392542a3be8b92085099 164 PIRSF PIRSF038996 1 164 6.1E-61 T 11-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 TF3313_1903 4db7a89c7500392542a3be8b92085099 164 PRINTS PR00369 Flavodoxin signature 51 62 9.3E-7 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 TF3313_1903 4db7a89c7500392542a3be8b92085099 164 PRINTS PR00369 Flavodoxin signature 5 18 9.3E-7 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 TF3313_1903 4db7a89c7500392542a3be8b92085099 164 PRINTS PR00369 Flavodoxin signature 80 90 9.3E-7 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 TF3313_1903 4db7a89c7500392542a3be8b92085099 164 Pfam PF00258 Flavodoxin 6 159 8.6E-27 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 TF3313_1903 4db7a89c7500392542a3be8b92085099 164 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 TF3313_1903 4db7a89c7500392542a3be8b92085099 164 Gene3D G3DSA:3.40.50.360 3 164 1.3E-49 T 11-10-2018 IPR029039 Flavoprotein-like superfamily TF3313_1903 4db7a89c7500392542a3be8b92085099 164 SUPERFAMILY SSF52218 1 163 1.54E-45 T 11-10-2018 IPR029039 Flavoprotein-like superfamily TF3313_1903 4db7a89c7500392542a3be8b92085099 164 TIGRFAM TIGR01752 flav_long: flavodoxin 3 164 5.1E-56 T 11-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 TF3313_2739 4e30fa7e88d0fd07546ed5089930ddb3 1180 Pfam PF13484 4Fe-4S double cluster binding domain 689 755 3.2E-9 T 11-10-2018 TF3313_2739 4e30fa7e88d0fd07546ed5089930ddb3 1180 PIRSF PIRSF000159 2 1180 0.0 T 11-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 TF3313_2739 4e30fa7e88d0fd07546ed5089930ddb3 1180 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 271 375 6.9E-15 T 11-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II TF3313_2739 4e30fa7e88d0fd07546ed5089930ddb3 1180 SUPERFAMILY SSF54862 670 831 4.6E-18 T 11-10-2018 TF3313_2739 4e30fa7e88d0fd07546ed5089930ddb3 1180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 744 755 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TF3313_2739 4e30fa7e88d0fd07546ed5089930ddb3 1180 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 427 609 5.0E-30 T 11-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 TF3313_2739 4e30fa7e88d0fd07546ed5089930ddb3 1180 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 7 1174 0.0 T 11-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 TF3313_2739 4e30fa7e88d0fd07546ed5089930ddb3 1180 Pfam PF10371 Domain of unknown function 628 679 2.9E-21 T 11-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 TF3313_2739 4e30fa7e88d0fd07546ed5089930ddb3 1180 Gene3D G3DSA:3.40.50.970 4 260 4.8E-108 T 11-10-2018 TF3313_2739 4e30fa7e88d0fd07546ed5089930ddb3 1180 SMART SM00890 622 680 5.6E-22 T 11-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 TF3313_2739 4e30fa7e88d0fd07546ed5089930ddb3 1180 Gene3D G3DSA:3.40.50.970 788 1177 1.4E-163 T 11-10-2018 TF3313_2739 4e30fa7e88d0fd07546ed5089930ddb3 1180 SUPERFAMILY SSF52518 6 260 2.15E-76 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold TF3313_2739 4e30fa7e88d0fd07546ed5089930ddb3 1180 SUPERFAMILY SSF52922 261 412 1.22E-48 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TF3313_2739 4e30fa7e88d0fd07546ed5089930ddb3 1180 Gene3D G3DSA:3.30.70.20 670 785 8.1E-38 T 11-10-2018 TF3313_2739 4e30fa7e88d0fd07546ed5089930ddb3 1180 SUPERFAMILY SSF52518 796 1178 3.41E-130 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold TF3313_2739 4e30fa7e88d0fd07546ed5089930ddb3 1180 Gene3D G3DSA:3.40.50.920 262 414 7.4E-59 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TF3313_2739 4e30fa7e88d0fd07546ed5089930ddb3 1180 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 24 249 2.4E-80 T 11-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 TF3313_2739 4e30fa7e88d0fd07546ed5089930ddb3 1180 SUPERFAMILY SSF53323 417 660 1.7E-79 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 TF3313_2739 4e30fa7e88d0fd07546ed5089930ddb3 1180 Gene3D G3DSA:3.40.920.10 417 626 5.5E-81 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 TF3313_2739 4e30fa7e88d0fd07546ed5089930ddb3 1180 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 961 1072 2.3E-9 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 TF3313_0252 c2dc53fe74692ba804735ca06e6514de 270 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 22 267 4.2E-117 T 11-10-2018 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 TF3313_0252 c2dc53fe74692ba804735ca06e6514de 270 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 22 268 1.5E-107 T 11-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 TF3313_0252 c2dc53fe74692ba804735ca06e6514de 270 Pfam PF01048 Phosphorylase superfamily 22 262 6.8E-48 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 TF3313_0252 c2dc53fe74692ba804735ca06e6514de 270 PIRSF PIRSF000477 1 270 4.8E-102 T 11-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 TF3313_0252 c2dc53fe74692ba804735ca06e6514de 270 SUPERFAMILY SSF53167 4 270 8.12E-90 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 TF3313_0252 c2dc53fe74692ba804735ca06e6514de 270 Gene3D G3DSA:3.40.50.1580 1 269 4.9E-108 T 11-10-2018 TF3313_1690 59c906467505886fb2e57bbeee120cbc 314 Pfam PF03186 CobD/Cbib protein 11 291 6.8E-101 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 TF3313_1690 59c906467505886fb2e57bbeee120cbc 314 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 11 268 2.7E-63 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 TF3313_1690 59c906467505886fb2e57bbeee120cbc 314 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 314 88.203 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 TF3313_2704 2bc5bf7b9ca8f41d49b519c86ede9bd2 378 Gene3D G3DSA:1.10.8.60 9 239 5.7E-101 T 11-10-2018 TF3313_2704 2bc5bf7b9ca8f41d49b519c86ede9bd2 378 Pfam PF13177 DNA polymerase III, delta subunit 21 180 4.7E-46 T 11-10-2018 TF3313_2704 2bc5bf7b9ca8f41d49b519c86ede9bd2 378 SUPERFAMILY SSF52540 32 224 2.01E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2704 2bc5bf7b9ca8f41d49b519c86ede9bd2 378 Gene3D G3DSA:1.20.272.10 249 366 2.8E-10 T 11-10-2018 TF3313_2704 2bc5bf7b9ca8f41d49b519c86ede9bd2 378 SMART SM00382 38 181 6.0E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_2704 2bc5bf7b9ca8f41d49b519c86ede9bd2 378 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 4 360 1.7E-134 T 11-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 TF3313_2704 2bc5bf7b9ca8f41d49b519c86ede9bd2 378 Gene3D G3DSA:3.40.50.300 14 179 5.7E-101 T 11-10-2018 TF3313_2704 2bc5bf7b9ca8f41d49b519c86ede9bd2 378 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 126 144 1.5E-5 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 TF3313_2704 2bc5bf7b9ca8f41d49b519c86ede9bd2 378 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 42 60 1.5E-5 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 TF3313_2704 2bc5bf7b9ca8f41d49b519c86ede9bd2 378 SUPERFAMILY SSF48019 246 365 1.12E-17 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 TF3313_1318 6e02615bc40a99e441ed6e301c86cf9d 284 Gene3D G3DSA:3.40.50.150 86 284 2.1E-59 T 11-10-2018 TF3313_1318 6e02615bc40a99e441ed6e301c86cf9d 284 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 186 192 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TF3313_1318 6e02615bc40a99e441ed6e301c86cf9d 284 Gene3D G3DSA:1.10.8.10 2 85 2.8E-13 T 11-10-2018 TF3313_1318 6e02615bc40a99e441ed6e301c86cf9d 284 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 5 283 37.961 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 TF3313_1318 6e02615bc40a99e441ed6e301c86cf9d 284 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 3 279 1.6E-62 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 TF3313_1318 6e02615bc40a99e441ed6e301c86cf9d 284 SUPERFAMILY SSF53335 6 269 5.38E-53 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_1318 6e02615bc40a99e441ed6e301c86cf9d 284 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 26 279 1.2E-76 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 TF3313_1318 6e02615bc40a99e441ed6e301c86cf9d 284 Pfam PF05175 Methyltransferase small domain 108 207 2.8E-17 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 TF3313_1248 ee1fab80811fd4912f2e934f9ba66958 490 Gene3D G3DSA:1.25.40.10 37 158 3.8E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1248 ee1fab80811fd4912f2e934f9ba66958 490 SUPERFAMILY SSF48452 42 132 2.13E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1248 ee1fab80811fd4912f2e934f9ba66958 490 Pfam PF13432 Tetratricopeptide repeat 41 98 2.7E-8 T 11-10-2018 TF3313_1248 ee1fab80811fd4912f2e934f9ba66958 490 Pfam PF07676 WD40-like Beta Propeller Repeat 241 280 7.7E-4 T 11-10-2018 IPR011659 WD40-like Beta Propeller TF3313_1313 316437df346389d2d553a81ec312ee66 354 SUPERFAMILY SSF158949 85 229 6.15E-55 T 11-10-2018 IPR036781 Smr-associated-like superfamily TF3313_1313 316437df346389d2d553a81ec312ee66 354 Gene3D G3DSA:3.30.1370.110 265 354 1.9E-14 T 11-10-2018 TF3313_1313 316437df346389d2d553a81ec312ee66 354 Pfam PF09640 Domain of unknown function (DUF2027) 94 249 2.2E-67 T 11-10-2018 IPR018598 Domain of unknown function DUF2027 TF3313_1313 316437df346389d2d553a81ec312ee66 354 Pfam PF01713 Smr domain 293 354 3.6E-7 T 11-10-2018 IPR002625 Smr domain TF3313_1313 316437df346389d2d553a81ec312ee66 354 Gene3D G3DSA:2.60.40.1600 95 230 2.1E-54 T 11-10-2018 IPR036781 Smr-associated-like superfamily TF3313_2422 028750f2fc98b7731de33283db327486 364 SUPERFAMILY SSF56219 102 361 1.7E-41 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TF3313_2422 028750f2fc98b7731de33283db327486 364 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 105 354 1.4E-17 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase TF3313_2422 028750f2fc98b7731de33283db327486 364 Gene3D G3DSA:3.60.10.10 97 359 1.1E-46 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TF3313_2314 76d28ffa4d5996bea11ff113c5e42e18 347 SUPERFAMILY SSF51735 1 327 2.35E-61 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_2314 76d28ffa4d5996bea11ff113c5e42e18 347 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 224 3.7E-35 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 TF3313_2314 76d28ffa4d5996bea11ff113c5e42e18 347 Gene3D G3DSA:3.40.50.720 1 331 6.9E-63 T 11-10-2018 TF3313_2548 8a0518c1f6926dd89108a7fde996b178 348 Pfam PF10150 Ribonuclease E/G family 2 237 3.0E-85 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 TF3313_2853 f97e8f37e23b91e66459636e06cca0f4 378 Pfam PF13595 Domain of unknown function (DUF4138) 123 361 7.2E-57 T 11-10-2018 IPR022298 Conjugative transposon, TraN TF3313_2853 f97e8f37e23b91e66459636e06cca0f4 378 Pfam PF13595 Domain of unknown function (DUF4138) 32 112 4.0E-16 T 11-10-2018 IPR022298 Conjugative transposon, TraN TF3313_2853 f97e8f37e23b91e66459636e06cca0f4 378 TIGRFAM TIGR03780 Bac_Flav_CT_N: Bacteroides conjugative transposon TraN protein 119 361 7.6E-54 T 11-10-2018 IPR022298 Conjugative transposon, TraN TF3313_0133 8f4ee9e728355a92f3ea514b8d9b573b 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 417 1.8E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_0133 8f4ee9e728355a92f3ea514b8d9b573b 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 384 1.8E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_0133 8f4ee9e728355a92f3ea514b8d9b573b 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 398 1.8E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_0133 8f4ee9e728355a92f3ea514b8d9b573b 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 1.8E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_0133 8f4ee9e728355a92f3ea514b8d9b573b 437 Gene3D G3DSA:1.10.287.130 229 285 7.1E-39 T 11-10-2018 TF3313_0133 8f4ee9e728355a92f3ea514b8d9b573b 437 SMART SM00387 329 437 1.6E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TF3313_0133 8f4ee9e728355a92f3ea514b8d9b573b 437 Gene3D G3DSA:3.30.565.10 286 437 7.1E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TF3313_0133 8f4ee9e728355a92f3ea514b8d9b573b 437 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 330 436 2.2E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TF3313_0133 8f4ee9e728355a92f3ea514b8d9b573b 437 SUPERFAMILY SSF55874 278 437 1.83E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TF3313_2557 e7c6bc542f3d14b538f0dec9a231db58 542 SMART SM00635 27 107 0.0022 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_2557 e7c6bc542f3d14b538f0dec9a231db58 542 SMART SM00635 114 192 1.9E-6 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_2557 e7c6bc542f3d14b538f0dec9a231db58 542 SMART SM00635 383 460 4.7E-17 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_2557 e7c6bc542f3d14b538f0dec9a231db58 542 SMART SM00635 291 368 3.9E-10 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_2557 e7c6bc542f3d14b538f0dec9a231db58 542 SMART SM00635 199 276 2.6E-10 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_2557 e7c6bc542f3d14b538f0dec9a231db58 542 SUPERFAMILY SSF49373 288 365 4.32E-16 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments TF3313_2557 e7c6bc542f3d14b538f0dec9a231db58 542 SUPERFAMILY SSF49373 116 196 1.77E-11 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments TF3313_2557 e7c6bc542f3d14b538f0dec9a231db58 542 Pfam PF02368 Bacterial Ig-like domain (group 2) 384 461 3.1E-18 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_2557 e7c6bc542f3d14b538f0dec9a231db58 542 Pfam PF02368 Bacterial Ig-like domain (group 2) 36 103 1.6E-6 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_2557 e7c6bc542f3d14b538f0dec9a231db58 542 Pfam PF02368 Bacterial Ig-like domain (group 2) 292 367 2.8E-13 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_2557 e7c6bc542f3d14b538f0dec9a231db58 542 Pfam PF02368 Bacterial Ig-like domain (group 2) 128 187 3.8E-9 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_2557 e7c6bc542f3d14b538f0dec9a231db58 542 Pfam PF02368 Bacterial Ig-like domain (group 2) 200 269 2.7E-12 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_2557 e7c6bc542f3d14b538f0dec9a231db58 542 SUPERFAMILY SSF49373 381 463 1.18E-21 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments TF3313_2557 e7c6bc542f3d14b538f0dec9a231db58 542 SUPERFAMILY SSF49373 27 111 4.32E-8 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments TF3313_2557 e7c6bc542f3d14b538f0dec9a231db58 542 Gene3D G3DSA:2.60.40.1080 122 197 3.2E-14 T 11-10-2018 TF3313_2557 e7c6bc542f3d14b538f0dec9a231db58 542 Gene3D G3DSA:2.60.40.1080 26 112 4.5E-14 T 11-10-2018 TF3313_2557 e7c6bc542f3d14b538f0dec9a231db58 542 Gene3D G3DSA:2.60.40.1080 288 374 2.7E-21 T 11-10-2018 TF3313_2557 e7c6bc542f3d14b538f0dec9a231db58 542 Gene3D G3DSA:2.60.40.1080 198 283 2.4E-16 T 11-10-2018 TF3313_2557 e7c6bc542f3d14b538f0dec9a231db58 542 Gene3D G3DSA:2.60.40.1080 381 465 7.2E-28 T 11-10-2018 TF3313_2557 e7c6bc542f3d14b538f0dec9a231db58 542 SUPERFAMILY SSF49373 199 269 1.33E-11 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments TF3313_2779 91707ebe7ece859956ee5461bc089331 168 Gene3D G3DSA:3.40.220.10 13 162 2.0E-42 T 11-10-2018 TF3313_2779 91707ebe7ece859956ee5461bc089331 168 Pfam PF01661 Macro domain 65 160 1.3E-22 T 11-10-2018 IPR002589 Macro domain TF3313_2779 91707ebe7ece859956ee5461bc089331 168 SMART SM00506 48 168 1.3E-4 T 11-10-2018 IPR002589 Macro domain TF3313_2779 91707ebe7ece859956ee5461bc089331 168 SUPERFAMILY SSF52949 41 160 4.71E-34 T 11-10-2018 TF3313_0485 49fd604074aaafffb42cacd2392d83f2 457 Gene3D G3DSA:3.40.50.300 1 165 1.1E-26 T 11-10-2018 TF3313_0485 49fd604074aaafffb42cacd2392d83f2 457 SUPERFAMILY SSF52540 1 227 6.0E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0485 49fd604074aaafffb42cacd2392d83f2 457 Pfam PF01637 ATPase domain predominantly from Archaea 3 159 7.3E-14 T 11-10-2018 IPR011579 ATPase domain GO:0005524 TF3313_0485 49fd604074aaafffb42cacd2392d83f2 457 Pfam PF03008 Archaea bacterial proteins of unknown function 307 405 1.1E-16 T 11-10-2018 IPR004256 Domain of unknown function DUF234, DEXX-box ATPase C-terminal TF3313_0485 49fd604074aaafffb42cacd2392d83f2 457 SUPERFAMILY SSF46785 241 329 6.39E-6 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TF3313_1416 bb2f295339eb3054acd76183ba22f461 88 Gene3D G3DSA:3.30.860.10 1 88 5.0E-37 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1416 bb2f295339eb3054acd76183ba22f461 88 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 88 23.711 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1416 bb2f295339eb3054acd76183ba22f461 88 SUPERFAMILY SSF54570 2 84 5.89E-34 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1416 bb2f295339eb3054acd76183ba22f461 88 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 88 1.2E-42 T 11-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 TF3313_1416 bb2f295339eb3054acd76183ba22f461 88 Pfam PF00203 Ribosomal protein S19 3 83 6.3E-35 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1416 bb2f295339eb3054acd76183ba22f461 88 PIRSF PIRSF002144 1 88 4.0E-31 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1416 bb2f295339eb3054acd76183ba22f461 88 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 11-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1416 bb2f295339eb3054acd76183ba22f461 88 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 2.4E-22 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1416 bb2f295339eb3054acd76183ba22f461 88 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 2.4E-22 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1416 bb2f295339eb3054acd76183ba22f461 88 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 2.4E-22 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_0499 1c1246ba0aaff5db2dad229a05704ad2 677 Hamap MF_00204 UvrABC system protein B [uvrB]. 1 669 41.212 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 TF3313_0499 1c1246ba0aaff5db2dad229a05704ad2 677 Pfam PF00271 Helicase conserved C-terminal domain 434 545 2.7E-16 T 11-10-2018 IPR001650 Helicase, C-terminal TF3313_0499 1c1246ba0aaff5db2dad229a05704ad2 677 SUPERFAMILY SSF52540 3 416 2.2E-121 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0499 1c1246ba0aaff5db2dad229a05704ad2 677 SMART SM00487 7 426 1.6E-24 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TF3313_0499 1c1246ba0aaff5db2dad229a05704ad2 677 Pfam PF02151 UvrB/uvrC motif 634 668 2.4E-6 T 11-10-2018 IPR001943 UVR domain GO:0005515 TF3313_0499 1c1246ba0aaff5db2dad229a05704ad2 677 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 3 666 1.5E-299 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 TF3313_0499 1c1246ba0aaff5db2dad229a05704ad2 677 Pfam PF04851 Type III restriction enzyme, res subunit 11 85 3.5E-8 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 TF3313_0499 1c1246ba0aaff5db2dad229a05704ad2 677 SUPERFAMILY SSF52540 35 585 5.8E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0499 1c1246ba0aaff5db2dad229a05704ad2 677 Gene3D G3DSA:3.40.50.300 1 182 1.3E-71 T 11-10-2018 TF3313_0499 1c1246ba0aaff5db2dad229a05704ad2 677 Gene3D G3DSA:3.40.50.300 277 415 4.4E-53 T 11-10-2018 TF3313_0499 1c1246ba0aaff5db2dad229a05704ad2 677 SUPERFAMILY SSF46600 625 671 9.42E-9 T 11-10-2018 IPR036876 UVR domain superfamily TF3313_0499 1c1246ba0aaff5db2dad229a05704ad2 677 SMART SM00490 461 547 6.5E-18 T 11-10-2018 IPR001650 Helicase, C-terminal TF3313_0499 1c1246ba0aaff5db2dad229a05704ad2 677 Pfam PF12344 Ultra-violet resistance protein B 553 593 1.5E-22 T 11-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain TF3313_0499 1c1246ba0aaff5db2dad229a05704ad2 677 Gene3D G3DSA:4.10.860.10 615 670 3.0E-6 T 11-10-2018 TF3313_0499 1c1246ba0aaff5db2dad229a05704ad2 677 Gene3D G3DSA:3.40.50.300 416 591 9.0E-49 T 11-10-2018 TF3313_1649 4b86d6959519918b8dbd914fe39e4685 466 Gene3D G3DSA:3.40.50.720 150 267 1.8E-7 T 11-10-2018 TF3313_1649 4b86d6959519918b8dbd914fe39e4685 466 Pfam PF13727 CoA-binding domain 79 216 9.0E-6 T 11-10-2018 TF3313_1649 4b86d6959519918b8dbd914fe39e4685 466 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 13 465 5.9E-126 T 11-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase TF3313_1649 4b86d6959519918b8dbd914fe39e4685 466 Pfam PF02397 Bacterial sugar transferase 279 461 1.4E-62 T 11-10-2018 IPR003362 Bacterial sugar transferase TF3313_0387 a6e1bb96e8426eb1b6f42e9253bc36cf 1129 SUPERFAMILY SSF51445 367 645 6.24E-79 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily TF3313_0387 a6e1bb96e8426eb1b6f42e9253bc36cf 1129 Pfam PF16353 Domain of unknown function(DUF4981) 660 745 3.3E-18 T 11-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 TF3313_0387 a6e1bb96e8426eb1b6f42e9253bc36cf 1129 SMART SM01038 770 1100 4.1E-123 T 11-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 TF3313_0387 a6e1bb96e8426eb1b6f42e9253bc36cf 1129 Gene3D G3DSA:2.60.40.10 646 747 1.2E-22 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_0387 a6e1bb96e8426eb1b6f42e9253bc36cf 1129 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 367 648 4.6E-83 T 11-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 TF3313_0387 a6e1bb96e8426eb1b6f42e9253bc36cf 1129 SUPERFAMILY SSF49303 239 348 1.03E-19 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily TF3313_0387 a6e1bb96e8426eb1b6f42e9253bc36cf 1129 SUPERFAMILY SSF74650 757 1102 9.42E-77 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 TF3313_0387 a6e1bb96e8426eb1b6f42e9253bc36cf 1129 Gene3D G3DSA:2.60.120.260 20 237 2.4E-81 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_0387 a6e1bb96e8426eb1b6f42e9253bc36cf 1129 Pfam PF00703 Glycosyl hydrolases family 2 239 348 4.8E-16 T 11-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 TF3313_0387 a6e1bb96e8426eb1b6f42e9253bc36cf 1129 Pfam PF02929 Beta galactosidase small chain 774 1099 2.2E-62 T 11-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 TF3313_0387 a6e1bb96e8426eb1b6f42e9253bc36cf 1129 SUPERFAMILY SSF49785 26 236 6.52E-57 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_0387 a6e1bb96e8426eb1b6f42e9253bc36cf 1129 PRINTS PR00132 Glycosyl hydrolase family 2 signature 551 566 7.6E-25 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 TF3313_0387 a6e1bb96e8426eb1b6f42e9253bc36cf 1129 PRINTS PR00132 Glycosyl hydrolase family 2 signature 164 179 7.6E-25 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 TF3313_0387 a6e1bb96e8426eb1b6f42e9253bc36cf 1129 PRINTS PR00132 Glycosyl hydrolase family 2 signature 477 492 7.6E-25 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 TF3313_0387 a6e1bb96e8426eb1b6f42e9253bc36cf 1129 PRINTS PR00132 Glycosyl hydrolase family 2 signature 370 384 7.6E-25 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 TF3313_0387 a6e1bb96e8426eb1b6f42e9253bc36cf 1129 PRINTS PR00132 Glycosyl hydrolase family 2 signature 401 419 7.6E-25 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 TF3313_0387 a6e1bb96e8426eb1b6f42e9253bc36cf 1129 Gene3D G3DSA:2.60.40.10 239 348 6.0E-22 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_0387 a6e1bb96e8426eb1b6f42e9253bc36cf 1129 Gene3D G3DSA:3.20.20.80 365 645 1.4E-98 T 11-10-2018 TF3313_0387 a6e1bb96e8426eb1b6f42e9253bc36cf 1129 SUPERFAMILY SSF49303 652 749 1.49E-18 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily TF3313_0387 a6e1bb96e8426eb1b6f42e9253bc36cf 1129 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 67 236 1.7E-36 T 11-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 TF3313_1629 8be23edd1d8491f9550ab44d0de8ef66 393 SUPERFAMILY SSF53383 4 390 3.46E-96 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TF3313_1629 8be23edd1d8491f9550ab44d0de8ef66 393 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 6 388 3.1E-144 T 11-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 TF3313_1629 8be23edd1d8491f9550ab44d0de8ef66 393 Gene3D G3DSA:3.40.640.10 69 292 1.5E-139 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TF3313_1629 8be23edd1d8491f9550ab44d0de8ef66 393 Pfam PF00155 Aminotransferase class I and II 68 384 4.3E-34 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TF3313_1629 8be23edd1d8491f9550ab44d0de8ef66 393 Gene3D G3DSA:3.90.1150.10 14 384 1.5E-139 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TF3313_1479 58e1f668f9ed12bced43a5ffc65b33cf 255 Gene3D G3DSA:3.40.50.150 53 243 1.8E-19 T 11-10-2018 TF3313_1479 58e1f668f9ed12bced43a5ffc65b33cf 255 Pfam PF08241 Methyltransferase domain 70 164 4.7E-15 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 TF3313_1479 58e1f668f9ed12bced43a5ffc65b33cf 255 SUPERFAMILY SSF53335 56 248 9.9E-25 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_0960 f69faf33860801c9fc7e059d089d2d97 369 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 23 0.001 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal TF3313_0960 f69faf33860801c9fc7e059d089d2d97 369 Gene3D G3DSA:3.20.20.80 32 369 1.2E-140 T 11-10-2018 TF3313_0960 f69faf33860801c9fc7e059d089d2d97 369 Pfam PF14488 Domain of unknown function (DUF4434) 63 229 1.4E-56 T 11-10-2018 IPR027849 Protein of unknown function DUF4434 TF3313_0960 f69faf33860801c9fc7e059d089d2d97 369 SUPERFAMILY SSF51445 79 237 1.02E-7 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily TF3313_0960 f69faf33860801c9fc7e059d089d2d97 369 Pfam PF17134 Domain of unknown function (DUF5109) 249 362 9.2E-55 T 11-10-2018 IPR033402 Domain of unknown function DUF5109 TF3313_0081 6b96c32dc839b54dea891c5b84832748 406 Pfam PF17170 6-bladed beta-propeller 47 325 1.3E-22 T 11-10-2018 TF3313_2242 ac8c394795391d249d9fc6ce600a4103 151 PIRSF PIRSF000239 1 144 1.3E-21 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TF3313_2242 ac8c394795391d249d9fc6ce600a4103 151 Pfam PF00578 AhpC/TSA family 6 133 1.7E-35 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TF3313_2242 ac8c394795391d249d9fc6ce600a4103 151 Gene3D G3DSA:3.40.30.10 2 151 3.0E-46 T 11-10-2018 TF3313_2242 ac8c394795391d249d9fc6ce600a4103 151 SUPERFAMILY SSF52833 3 149 1.83E-46 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TF3313_1583 a5c9c6f707f416fbdc6610fe7d69bf30 151 Gene3D G3DSA:3.40.30.10 25 151 1.9E-38 T 11-10-2018 TF3313_1583 a5c9c6f707f416fbdc6610fe7d69bf30 151 ProSitePatterns PS00194 Thioredoxin family active site. 63 81 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 TF3313_1583 a5c9c6f707f416fbdc6610fe7d69bf30 151 PIRSF PIRSF000077 41 146 1.1E-27 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 TF3313_1583 a5c9c6f707f416fbdc6610fe7d69bf30 151 Pfam PF00085 Thioredoxin 58 144 1.7E-26 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 TF3313_1583 a5c9c6f707f416fbdc6610fe7d69bf30 151 TIGRFAM TIGR01068 thioredoxin: thioredoxin 49 145 1.0E-30 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 TF3313_1583 a5c9c6f707f416fbdc6610fe7d69bf30 151 SUPERFAMILY SSF52833 29 148 1.58E-31 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TF3313_1583 a5c9c6f707f416fbdc6610fe7d69bf30 151 PRINTS PR00421 Thioredoxin family signature 110 121 8.7E-7 T 11-10-2018 TF3313_1583 a5c9c6f707f416fbdc6610fe7d69bf30 151 PRINTS PR00421 Thioredoxin family signature 70 79 8.7E-7 T 11-10-2018 TF3313_1583 a5c9c6f707f416fbdc6610fe7d69bf30 151 PRINTS PR00421 Thioredoxin family signature 62 70 8.7E-7 T 11-10-2018 TF3313_0316 3544c91bbcf8328a3f75db4f885b2469 716 Gene3D G3DSA:2.40.10.10 631 693 3.1E-6 T 11-10-2018 TF3313_0316 3544c91bbcf8328a3f75db4f885b2469 716 Pfam PF10459 Peptidase S46 23 713 2.3E-244 T 11-10-2018 IPR019500 Peptidase S46 GO:0008239|GO:0070009 TF3313_0316 3544c91bbcf8328a3f75db4f885b2469 716 SUPERFAMILY SSF50494 48 707 7.42E-25 T 11-10-2018 IPR009003 Peptidase S1, PA clan TF3313_2003 34413b9692c4f6814eb8bd5c23fcdbf6 343 SUPERFAMILY SSF48452 115 310 1.38E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2003 34413b9692c4f6814eb8bd5c23fcdbf6 343 SUPERFAMILY SSF48452 30 153 1.35E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2003 34413b9692c4f6814eb8bd5c23fcdbf6 343 Gene3D G3DSA:1.25.40.10 195 343 6.5E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2003 34413b9692c4f6814eb8bd5c23fcdbf6 343 Gene3D G3DSA:1.25.40.10 6 194 1.1E-29 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2003 34413b9692c4f6814eb8bd5c23fcdbf6 343 Pfam PF13424 Tetratricopeptide repeat 116 186 2.5E-9 T 11-10-2018 TF3313_2003 34413b9692c4f6814eb8bd5c23fcdbf6 343 SMART SM00028 72 105 88.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2003 34413b9692c4f6814eb8bd5c23fcdbf6 343 SMART SM00028 32 65 110.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2003 34413b9692c4f6814eb8bd5c23fcdbf6 343 SMART SM00028 277 310 350.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2003 34413b9692c4f6814eb8bd5c23fcdbf6 343 SMART SM00028 117 150 0.87 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2003 34413b9692c4f6814eb8bd5c23fcdbf6 343 SMART SM00028 197 230 49.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2003 34413b9692c4f6814eb8bd5c23fcdbf6 343 SMART SM00028 157 190 28.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2184 6b87b3e72fe1f78342d152c6d846a154 272 Pfam PF01148 Cytidylyltransferase family 2 269 6.4E-54 T 11-10-2018 TF3313_2184 6b87b3e72fe1f78342d152c6d846a154 272 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 227 253 - T 11-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 TF3313_2236 cf80e1eaf6313e9eecd9f10ca084367d 399 SUPERFAMILY SSF53756 15 372 3.77E-8 T 11-10-2018 TF3313_1869 174a5d52fbac384f45620eda30bd8a7f 292 Gene3D G3DSA:2.70.70.10 143 292 1.5E-34 T 11-10-2018 IPR011055 Duplicated hybrid motif TF3313_1869 174a5d52fbac384f45620eda30bd8a7f 292 Pfam PF01551 Peptidase family M23 191 286 5.7E-27 T 11-10-2018 IPR016047 Peptidase M23 TF3313_1869 174a5d52fbac384f45620eda30bd8a7f 292 SUPERFAMILY SSF51261 133 290 5.75E-42 T 11-10-2018 IPR011055 Duplicated hybrid motif TF3313_2509 5c48cd2ace177e92e04494cac533246b 377 Pfam PF02368 Bacterial Ig-like domain (group 2) 121 197 1.9E-9 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_2509 5c48cd2ace177e92e04494cac533246b 377 Pfam PF02368 Bacterial Ig-like domain (group 2) 210 288 3.3E-11 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_2509 5c48cd2ace177e92e04494cac533246b 377 SMART SM00635 118 198 3.1E-6 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_2509 5c48cd2ace177e92e04494cac533246b 377 SMART SM00635 293 375 2.1 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_2509 5c48cd2ace177e92e04494cac533246b 377 SMART SM00635 207 287 2.1E-7 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_2509 5c48cd2ace177e92e04494cac533246b 377 SMART SM00635 23 104 0.0018 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_2509 5c48cd2ace177e92e04494cac533246b 377 SUPERFAMILY SSF49373 118 200 6.75E-9 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments TF3313_2509 5c48cd2ace177e92e04494cac533246b 377 Gene3D G3DSA:2.60.40.1080 293 377 2.0E-8 T 11-10-2018 TF3313_2509 5c48cd2ace177e92e04494cac533246b 377 Gene3D G3DSA:2.60.40.1080 205 290 1.7E-18 T 11-10-2018 TF3313_2509 5c48cd2ace177e92e04494cac533246b 377 Gene3D G3DSA:2.60.40.1080 23 112 7.7E-10 T 11-10-2018 TF3313_2509 5c48cd2ace177e92e04494cac533246b 377 Gene3D G3DSA:2.60.40.1080 116 201 8.3E-16 T 11-10-2018 TF3313_2509 5c48cd2ace177e92e04494cac533246b 377 SUPERFAMILY SSF49373 206 289 8.63E-9 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments TF3313_1850 bc3c6a24433bfec7566ab04529363d29 179 SUPERFAMILY SSF88659 114 178 4.67E-13 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TF3313_1850 bc3c6a24433bfec7566ab04529363d29 179 Pfam PF08281 Sigma-70, region 4 125 175 3.4E-11 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TF3313_1850 bc3c6a24433bfec7566ab04529363d29 179 SUPERFAMILY SSF88946 9 101 2.12E-14 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_1850 bc3c6a24433bfec7566ab04529363d29 179 Gene3D G3DSA:1.10.10.10 109 179 3.9E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_1850 bc3c6a24433bfec7566ab04529363d29 179 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 178 1.6E-19 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TF3313_1850 bc3c6a24433bfec7566ab04529363d29 179 Gene3D G3DSA:1.10.1740.10 4 89 3.5E-9 T 11-10-2018 TF3313_0393 f581b1fcc7ebcf6eaeebbe1c6694d64f 230 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 15 218 6.1E-57 T 11-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 TF3313_0393 f581b1fcc7ebcf6eaeebbe1c6694d64f 230 Gene3D G3DSA:3.40.50.1360 1 230 1.2E-64 T 11-10-2018 TF3313_0393 f581b1fcc7ebcf6eaeebbe1c6694d64f 230 SUPERFAMILY SSF100950 1 230 6.8E-54 T 11-10-2018 IPR037171 NagB/RpiA transferase-like TF3313_0393 f581b1fcc7ebcf6eaeebbe1c6694d64f 230 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 25 230 7.6E-55 T 11-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 TF3313_2325 6634c4c16198b3918dcc20f8972c8500 392 Pfam PF01321 Creatinase/Prolidase N-terminal domain 14 134 1.1E-11 T 11-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 TF3313_2325 6634c4c16198b3918dcc20f8972c8500 392 Gene3D G3DSA:3.40.350.10 13 133 4.2E-9 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal TF3313_2325 6634c4c16198b3918dcc20f8972c8500 392 SUPERFAMILY SSF53092 19 134 2.44E-12 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal TF3313_2325 6634c4c16198b3918dcc20f8972c8500 392 Gene3D G3DSA:3.90.230.10 134 391 4.0E-50 T 11-10-2018 TF3313_2325 6634c4c16198b3918dcc20f8972c8500 392 SUPERFAMILY SSF55920 133 389 4.84E-48 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like TF3313_2325 6634c4c16198b3918dcc20f8972c8500 392 Pfam PF00557 Metallopeptidase family M24 141 374 5.9E-36 T 11-10-2018 IPR000994 Peptidase M24 TF3313_2951 afdbc257cd6691d4f6c1410d31730080 332 SUPERFAMILY SSF48179 183 328 5.95E-43 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TF3313_2951 afdbc257cd6691d4f6c1410d31730080 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 8.7E-31 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TF3313_2951 afdbc257cd6691d4f6c1410d31730080 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 8.7E-31 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TF3313_2951 afdbc257cd6691d4f6c1410d31730080 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 137 157 8.7E-31 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TF3313_2951 afdbc257cd6691d4f6c1410d31730080 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 177 201 8.7E-31 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TF3313_2951 afdbc257cd6691d4f6c1410d31730080 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 242 259 8.7E-31 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TF3313_2951 afdbc257cd6691d4f6c1410d31730080 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 61 88 8.7E-31 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TF3313_2951 afdbc257cd6691d4f6c1410d31730080 332 PIRSF PIRSF000114 1 332 9.5E-95 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TF3313_2951 afdbc257cd6691d4f6c1410d31730080 332 SUPERFAMILY SSF51735 7 179 2.89E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_2951 afdbc257cd6691d4f6c1410d31730080 332 Gene3D G3DSA:1.10.1040.10 193 331 1.4E-45 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TF3313_2951 afdbc257cd6691d4f6c1410d31730080 332 Gene3D G3DSA:3.40.50.720 2 191 4.7E-44 T 11-10-2018 TF3313_2951 afdbc257cd6691d4f6c1410d31730080 332 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 7 161 9.0E-33 T 11-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TF3313_2951 afdbc257cd6691d4f6c1410d31730080 332 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 184 324 6.7E-49 T 11-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TF3313_2681 7a51402240e07259bb027545dfa429a4 465 Pfam PF02397 Bacterial sugar transferase 274 458 7.2E-66 T 11-10-2018 IPR003362 Bacterial sugar transferase TF3313_2681 7a51402240e07259bb027545dfa429a4 465 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 18 465 2.0E-133 T 11-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase TF3313_2681 7a51402240e07259bb027545dfa429a4 465 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 21 465 5.1E-144 T 11-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 TF3313_2681 7a51402240e07259bb027545dfa429a4 465 Pfam PF13727 CoA-binding domain 90 237 1.1E-19 T 11-10-2018 TF3313_2681 7a51402240e07259bb027545dfa429a4 465 Gene3D G3DSA:3.40.50.720 140 257 1.4E-17 T 11-10-2018 TF3313_2681 7a51402240e07259bb027545dfa429a4 465 SUPERFAMILY SSF51735 142 231 2.68E-6 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_2368 daaba79f0998ba5c72e7cf809d1e95fa 247 Pfam PF02754 Cysteine-rich domain 3 82 8.2E-11 T 11-10-2018 IPR004017 Cysteine-rich domain TF3313_2368 daaba79f0998ba5c72e7cf809d1e95fa 247 Pfam PF02754 Cysteine-rich domain 129 223 3.7E-12 T 11-10-2018 IPR004017 Cysteine-rich domain TF3313_0781 4781d3acbbae20bb4645ab1b21c140a8 1028 Gene3D G3DSA:3.30.2090.10 178 284 1.6E-271 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TF3313_0781 4781d3acbbae20bb4645ab1b21c140a8 1028 Gene3D G3DSA:1.20.1640.10 517 1014 1.6E-271 T 11-10-2018 TF3313_0781 4781d3acbbae20bb4645ab1b21c140a8 1028 Gene3D G3DSA:3.30.70.1430 41 808 1.6E-271 T 11-10-2018 TF3313_0781 4781d3acbbae20bb4645ab1b21c140a8 1028 Gene3D G3DSA:3.30.70.1430 563 664 1.6E-271 T 11-10-2018 TF3313_0781 4781d3acbbae20bb4645ab1b21c140a8 1028 SUPERFAMILY SSF82714 184 276 5.49E-9 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TF3313_0781 4781d3acbbae20bb4645ab1b21c140a8 1028 Gene3D G3DSA:3.30.2090.10 716 800 1.6E-271 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TF3313_0781 4781d3acbbae20bb4645ab1b21c140a8 1028 PRINTS PR00702 Acriflavin resistance protein family signature 371 392 1.0E-38 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_0781 4781d3acbbae20bb4645ab1b21c140a8 1028 PRINTS PR00702 Acriflavin resistance protein family signature 477 500 1.0E-38 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_0781 4781d3acbbae20bb4645ab1b21c140a8 1028 PRINTS PR00702 Acriflavin resistance protein family signature 452 475 1.0E-38 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_0781 4781d3acbbae20bb4645ab1b21c140a8 1028 PRINTS PR00702 Acriflavin resistance protein family signature 399 423 1.0E-38 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_0781 4781d3acbbae20bb4645ab1b21c140a8 1028 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 1.0E-38 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_0781 4781d3acbbae20bb4645ab1b21c140a8 1028 PRINTS PR00702 Acriflavin resistance protein family signature 344 367 1.0E-38 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_0781 4781d3acbbae20bb4645ab1b21c140a8 1028 Pfam PF00873 AcrB/AcrD/AcrF family 4 1017 1.5E-208 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_0781 4781d3acbbae20bb4645ab1b21c140a8 1028 SUPERFAMILY SSF82693 142 327 3.98E-13 T 11-10-2018 TF3313_0781 4781d3acbbae20bb4645ab1b21c140a8 1028 SUPERFAMILY SSF82866 306 501 6.67E-43 T 11-10-2018 TF3313_0781 4781d3acbbae20bb4645ab1b21c140a8 1028 Gene3D G3DSA:3.30.70.1320 133 340 1.6E-271 T 11-10-2018 TF3313_0781 4781d3acbbae20bb4645ab1b21c140a8 1028 SUPERFAMILY SSF82866 797 1019 3.27E-52 T 11-10-2018 TF3313_0781 4781d3acbbae20bb4645ab1b21c140a8 1028 Gene3D G3DSA:3.30.70.1440 665 858 1.6E-271 T 11-10-2018 TF3313_0781 4781d3acbbae20bb4645ab1b21c140a8 1028 SUPERFAMILY SSF82714 717 796 2.35E-6 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TF3313_0781 4781d3acbbae20bb4645ab1b21c140a8 1028 Gene3D G3DSA:1.20.1640.10 11 516 1.6E-271 T 11-10-2018 TF3313_0907 a8359069af114de9d8e85a840ac0ac42 629 Gene3D G3DSA:1.25.40.390 19 624 6.0E-108 T 11-10-2018 TF3313_0907 a8359069af114de9d8e85a840ac0ac42 629 Pfam PF14322 Starch-binding associating with outer membrane 22 219 2.4E-13 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_0907 a8359069af114de9d8e85a840ac0ac42 629 SUPERFAMILY SSF48452 19 629 2.91E-101 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0907 a8359069af114de9d8e85a840ac0ac42 629 Pfam PF07980 SusD family 313 629 7.8E-54 T 11-10-2018 IPR012944 RagB/SusD domain TF3313_0511 0dac6de039a41ab6f88a505125b018ca 468 Pfam PF01943 Polysaccharide biosynthesis protein 9 266 2.0E-15 T 11-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 TF3313_0511 0dac6de039a41ab6f88a505125b018ca 468 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 330 445 1.0E-10 T 11-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain TF3313_2401 74d5f266f1c91db78928cd2a7087fbd2 657 Gene3D G3DSA:3.40.50.300 8 286 2.0E-66 T 11-10-2018 TF3313_2401 74d5f266f1c91db78928cd2a7087fbd2 657 ProSitePatterns PS00211 ABC transporters family signature. 446 460 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TF3313_2401 74d5f266f1c91db78928cd2a7087fbd2 657 Gene3D G3DSA:3.40.50.300 290 551 2.3E-61 T 11-10-2018 TF3313_2401 74d5f266f1c91db78928cd2a7087fbd2 657 Pfam PF00005 ABC transporter 345 474 9.1E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TF3313_2401 74d5f266f1c91db78928cd2a7087fbd2 657 SUPERFAMILY SSF52540 303 536 2.09E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2401 74d5f266f1c91db78928cd2a7087fbd2 657 Pfam PF00005 ABC transporter 17 192 1.3E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TF3313_2401 74d5f266f1c91db78928cd2a7087fbd2 657 SUPERFAMILY SSF52540 7 240 1.58E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2401 74d5f266f1c91db78928cd2a7087fbd2 657 SMART SM00382 352 519 9.7E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_2401 74d5f266f1c91db78928cd2a7087fbd2 657 SMART SM00382 26 237 2.1E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_2401 74d5f266f1c91db78928cd2a7087fbd2 657 Pfam PF12848 ABC transporter 231 310 1.1E-25 T 11-10-2018 IPR032781 ABC-transporter extension domain TF3313_2401 74d5f266f1c91db78928cd2a7087fbd2 657 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TF3313_1784 566311bcdcd7e575a5e789378b2c83ad 180 SMART SM00738 5 113 2.0E-23 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TF3313_1784 566311bcdcd7e575a5e789378b2c83ad 180 Pfam PF00467 KOW motif 129 162 4.6E-6 T 11-10-2018 IPR005824 KOW TF3313_1784 566311bcdcd7e575a5e789378b2c83ad 180 Gene3D G3DSA:2.30.30.30 122 179 1.3E-22 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 TF3313_1784 566311bcdcd7e575a5e789378b2c83ad 180 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 5 180 20.35 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 TF3313_1784 566311bcdcd7e575a5e789378b2c83ad 180 Gene3D G3DSA:3.30.70.940 1 121 1.4E-34 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TF3313_1784 566311bcdcd7e575a5e789378b2c83ad 180 PRINTS PR00338 Transcription termination factor NUSG signature 60 72 6.1E-17 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 TF3313_1784 566311bcdcd7e575a5e789378b2c83ad 180 PRINTS PR00338 Transcription termination factor NUSG signature 156 172 6.1E-17 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 TF3313_1784 566311bcdcd7e575a5e789378b2c83ad 180 PRINTS PR00338 Transcription termination factor NUSG signature 138 153 6.1E-17 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 TF3313_1784 566311bcdcd7e575a5e789378b2c83ad 180 SUPERFAMILY SSF82679 7 114 1.83E-26 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TF3313_1784 566311bcdcd7e575a5e789378b2c83ad 180 SUPERFAMILY SSF50104 124 179 9.53E-18 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily TF3313_1784 566311bcdcd7e575a5e789378b2c83ad 180 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 179 1.9E-51 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 TF3313_1784 566311bcdcd7e575a5e789378b2c83ad 180 Pfam PF02357 Transcription termination factor nusG 6 109 7.8E-18 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TF3313_0832 2a3ab82dfbd91575e89a906abedb8516 862 SUPERFAMILY SSF49464 23 111 4.45E-9 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_0832 2a3ab82dfbd91575e89a906abedb8516 862 Pfam PF00593 TonB dependent receptor 767 861 1.8E-5 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_0832 2a3ab82dfbd91575e89a906abedb8516 862 Gene3D G3DSA:2.40.170.20 728 861 2.5E-6 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_0832 2a3ab82dfbd91575e89a906abedb8516 862 Pfam PF13715 CarboxypepD_reg-like domain 24 113 2.3E-8 T 11-10-2018 TF3313_0832 2a3ab82dfbd91575e89a906abedb8516 862 SUPERFAMILY SSF56935 101 861 3.19E-19 T 11-10-2018 TF3313_0692 550d5e665ab836f0a94ca6ca90bfaf1c 232 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TF3313_0692 550d5e665ab836f0a94ca6ca90bfaf1c 232 Gene3D G3DSA:3.40.50.300 5 232 1.0E-59 T 11-10-2018 TF3313_0692 550d5e665ab836f0a94ca6ca90bfaf1c 232 SUPERFAMILY SSF52540 9 230 4.66E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0692 550d5e665ab836f0a94ca6ca90bfaf1c 232 Pfam PF00005 ABC transporter 22 170 2.3E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TF3313_0692 550d5e665ab836f0a94ca6ca90bfaf1c 232 SMART SM00382 31 224 4.4E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_0694 7e7fefadf96d0b3f72b11848b9f51598 386 SUPERFAMILY SSF51419 15 275 5.38E-71 T 11-10-2018 IPR029066 PLP-binding barrel TF3313_0694 7e7fefadf96d0b3f72b11848b9f51598 386 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 5 385 32.907 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TF3313_0694 7e7fefadf96d0b3f72b11848b9f51598 386 SUPERFAMILY SSF50621 250 381 1.0E-39 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TF3313_0694 7e7fefadf96d0b3f72b11848b9f51598 386 PRINTS PR01181 Diaminopimelate decarboxylase signature 64 81 3.3E-16 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TF3313_0694 7e7fefadf96d0b3f72b11848b9f51598 386 PRINTS PR01181 Diaminopimelate decarboxylase signature 153 162 3.3E-16 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TF3313_0694 7e7fefadf96d0b3f72b11848b9f51598 386 PRINTS PR01181 Diaminopimelate decarboxylase signature 291 309 3.3E-16 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TF3313_0694 7e7fefadf96d0b3f72b11848b9f51598 386 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 46 64 - T 11-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site TF3313_0694 7e7fefadf96d0b3f72b11848b9f51598 386 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 41 272 2.8E-52 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 TF3313_0694 7e7fefadf96d0b3f72b11848b9f51598 386 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 11 379 1.4E-116 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TF3313_0694 7e7fefadf96d0b3f72b11848b9f51598 386 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 66 78 4.1E-20 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TF3313_0694 7e7fefadf96d0b3f72b11848b9f51598 386 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 179 192 4.1E-20 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TF3313_0694 7e7fefadf96d0b3f72b11848b9f51598 386 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 361 374 4.1E-20 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TF3313_0694 7e7fefadf96d0b3f72b11848b9f51598 386 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 46 64 4.1E-20 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TF3313_0694 7e7fefadf96d0b3f72b11848b9f51598 386 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 263 282 4.1E-20 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TF3313_0694 7e7fefadf96d0b3f72b11848b9f51598 386 Gene3D G3DSA:2.40.37.10 12 380 9.6E-120 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TF3313_0694 7e7fefadf96d0b3f72b11848b9f51598 386 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 19 361 4.8E-25 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 TF3313_0694 7e7fefadf96d0b3f72b11848b9f51598 386 Gene3D G3DSA:3.20.20.10 23 268 9.6E-120 T 11-10-2018 IPR029066 PLP-binding barrel TF3313_0465 4c110f383ca3b943495061d073da99d6 203 Pfam PF00578 AhpC/TSA family 29 174 2.5E-35 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TF3313_0465 4c110f383ca3b943495061d073da99d6 203 SUPERFAMILY SSF52833 26 187 1.76E-32 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TF3313_0465 4c110f383ca3b943495061d073da99d6 203 Gene3D G3DSA:3.40.30.10 20 194 4.3E-43 T 11-10-2018 TF3313_0743 5c19534c06607ac56ce3160b995cf813 298 Gene3D G3DSA:3.30.70.670 182 298 3.7E-37 T 11-10-2018 IPR037070 Formiminotransferase, C-terminal subdomain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TF3313_0743 5c19534c06607ac56ce3160b995cf813 298 SMART SM01221 181 295 1.5E-73 T 11-10-2018 IPR013802 Formiminotransferase, C-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TF3313_0743 5c19534c06607ac56ce3160b995cf813 298 Gene3D G3DSA:3.30.990.10 1 180 2.2E-68 T 11-10-2018 IPR037064 Formiminotransferase, N-terminal subdomain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 TF3313_0743 5c19534c06607ac56ce3160b995cf813 298 SUPERFAMILY SSF55116 181 297 2.49E-46 T 11-10-2018 IPR022384 Formiminotransferase catalytic domain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 TF3313_0743 5c19534c06607ac56ce3160b995cf813 298 Pfam PF07837 Formiminotransferase domain, N-terminal subdomain 4 179 8.6E-73 T 11-10-2018 IPR012886 Formiminotransferase, N-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 TF3313_0743 5c19534c06607ac56ce3160b995cf813 298 Pfam PF02971 Formiminotransferase domain 182 286 7.5E-25 T 11-10-2018 IPR013802 Formiminotransferase, C-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TF3313_0743 5c19534c06607ac56ce3160b995cf813 298 SUPERFAMILY SSF55116 3 180 5.62E-71 T 11-10-2018 IPR022384 Formiminotransferase catalytic domain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 TF3313_0743 5c19534c06607ac56ce3160b995cf813 298 SMART SM01222 3 180 1.3E-110 T 11-10-2018 IPR012886 Formiminotransferase, N-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 TF3313_0743 5c19534c06607ac56ce3160b995cf813 298 TIGRFAM TIGR02024 FtcD: glutamate formiminotransferase 1 297 9.4E-130 T 11-10-2018 IPR004227 Formiminotransferase catalytic domain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TF3313_1721 80379e455be65de14a8ef4e39751d75c 301 SUPERFAMILY SSF53448 4 278 3.38E-20 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_1721 80379e455be65de14a8ef4e39751d75c 301 Gene3D G3DSA:3.90.550.10 1 300 2.6E-112 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_2142 a5f424e18f9534d64db0d800d1195ee3 1125 SUPERFAMILY SSF51055 717 758 2.49E-5 T 11-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 TF3313_0841 76d654142716622d355141e6a0790968 195 SMART SM00855 2 148 5.3E-14 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TF3313_0841 76d654142716622d355141e6a0790968 195 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 175 7.2E-30 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TF3313_0841 76d654142716622d355141e6a0790968 195 SUPERFAMILY SSF53254 1 175 3.43E-36 T 11-10-2018 IPR029033 Histidine phosphatase superfamily TF3313_0841 76d654142716622d355141e6a0790968 195 Gene3D G3DSA:3.40.50.1240 1 191 1.8E-34 T 11-10-2018 IPR029033 Histidine phosphatase superfamily TF3313_0841 76d654142716622d355141e6a0790968 195 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 3 173 8.1E-56 T 11-10-2018 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 TF3313_0369 e40db0cf5ea54e27c9da2f21dcf4f0ac 499 Pfam PF13365 Trypsin-like peptidase domain 118 256 8.7E-34 T 11-10-2018 TF3313_0369 e40db0cf5ea54e27c9da2f21dcf4f0ac 499 SMART SM00228 295 377 8.9E-10 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TF3313_0369 e40db0cf5ea54e27c9da2f21dcf4f0ac 499 SUPERFAMILY SSF50494 63 287 4.2E-61 T 11-10-2018 IPR009003 Peptidase S1, PA clan TF3313_0369 e40db0cf5ea54e27c9da2f21dcf4f0ac 499 Gene3D G3DSA:2.30.42.10 404 491 2.3E-7 T 11-10-2018 TF3313_0369 e40db0cf5ea54e27c9da2f21dcf4f0ac 499 Gene3D G3DSA:2.30.42.10 293 395 7.2E-22 T 11-10-2018 TF3313_0369 e40db0cf5ea54e27c9da2f21dcf4f0ac 499 Pfam PF13180 PDZ domain 297 386 5.0E-16 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TF3313_0369 e40db0cf5ea54e27c9da2f21dcf4f0ac 499 SUPERFAMILY SSF50156 276 386 1.45E-18 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 TF3313_0369 e40db0cf5ea54e27c9da2f21dcf4f0ac 499 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 64 473 1.1E-133 T 11-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 TF3313_0369 e40db0cf5ea54e27c9da2f21dcf4f0ac 499 SUPERFAMILY SSF50156 405 471 8.54E-5 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 TF3313_0369 e40db0cf5ea54e27c9da2f21dcf4f0ac 499 PRINTS PR00834 HtrA/DegQ protease family signature 227 244 4.9E-54 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TF3313_0369 e40db0cf5ea54e27c9da2f21dcf4f0ac 499 PRINTS PR00834 HtrA/DegQ protease family signature 148 168 4.9E-54 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TF3313_0369 e40db0cf5ea54e27c9da2f21dcf4f0ac 499 PRINTS PR00834 HtrA/DegQ protease family signature 127 139 4.9E-54 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TF3313_0369 e40db0cf5ea54e27c9da2f21dcf4f0ac 499 PRINTS PR00834 HtrA/DegQ protease family signature 335 347 4.9E-54 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TF3313_0369 e40db0cf5ea54e27c9da2f21dcf4f0ac 499 PRINTS PR00834 HtrA/DegQ protease family signature 188 212 4.9E-54 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TF3313_0369 e40db0cf5ea54e27c9da2f21dcf4f0ac 499 PRINTS PR00834 HtrA/DegQ protease family signature 249 266 4.9E-54 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TF3313_0369 e40db0cf5ea54e27c9da2f21dcf4f0ac 499 Gene3D G3DSA:2.40.10.120 62 289 7.2E-77 T 11-10-2018 TF3313_2947 285dab7ff19a91104721b879c49ba8d8 172 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 5 156 1.4E-19 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 TF3313_0108 2bdd2392a14c57dc78f5d9a8383f4a2d 317 SUPERFAMILY SSF54862 13 157 2.3E-13 T 11-10-2018 TF3313_0108 2bdd2392a14c57dc78f5d9a8383f4a2d 317 PIRSF PIRSF000371 3 312 2.8E-89 T 11-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 TF3313_0108 2bdd2392a14c57dc78f5d9a8383f4a2d 317 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 14 306 4.3E-97 T 11-10-2018 TF3313_0108 2bdd2392a14c57dc78f5d9a8383f4a2d 317 Gene3D G3DSA:3.20.20.70 92 310 1.0E-61 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_0108 2bdd2392a14c57dc78f5d9a8383f4a2d 317 Gene3D G3DSA:3.20.20.70 9 78 1.0E-13 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_0108 2bdd2392a14c57dc78f5d9a8383f4a2d 317 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 63 74 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TF3313_0108 2bdd2392a14c57dc78f5d9a8383f4a2d 317 Pfam PF13353 4Fe-4S single cluster domain 24 213 1.0E-12 T 11-10-2018 TF3313_0108 2bdd2392a14c57dc78f5d9a8383f4a2d 317 ProSitePatterns PS01087 Radical activating enzymes signature. 25 46 - T 11-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 TF3313_0108 2bdd2392a14c57dc78f5d9a8383f4a2d 317 SUPERFAMILY SSF102114 113 299 1.12E-21 T 11-10-2018 TF3313_0108 2bdd2392a14c57dc78f5d9a8383f4a2d 317 Pfam PF04055 Radical SAM superfamily 32 249 2.3E-23 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TF3313_2334 ad28848f0d08ccd9f3eb173e4d1b2ba3 333 Pfam PF00082 Subtilase family 10 67 1.4E-14 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 TF3313_2334 ad28848f0d08ccd9f3eb173e4d1b2ba3 333 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 251 333 8.8E-8 T 11-10-2018 IPR026444 Secretion system C-terminal sorting domain TF3313_2334 ad28848f0d08ccd9f3eb173e4d1b2ba3 333 Gene3D G3DSA:3.40.50.200 2 79 2.5E-26 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 TF3313_2334 ad28848f0d08ccd9f3eb173e4d1b2ba3 333 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 17 27 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site TF3313_2334 ad28848f0d08ccd9f3eb173e4d1b2ba3 333 SUPERFAMILY SSF52743 6 76 6.81E-25 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 TF3313_1992 e58516615e9b39c70ea4b98cacd50a4f 314 SUPERFAMILY SSF53901 3 314 3.31E-45 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TF3313_1992 e58516615e9b39c70ea4b98cacd50a4f 314 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 314 5.4E-25 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 TF3313_1992 e58516615e9b39c70ea4b98cacd50a4f 314 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 104 181 1.1E-13 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 TF3313_1992 e58516615e9b39c70ea4b98cacd50a4f 314 Gene3D G3DSA:3.40.47.10 175 313 1.4E-32 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TF3313_1992 e58516615e9b39c70ea4b98cacd50a4f 314 Gene3D G3DSA:3.40.47.10 1 168 2.8E-44 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TF3313_2785 1d7ca55f452f4df844a4cdf4b720ff1e 228 SUPERFAMILY SSF55469 48 221 6.81E-42 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TF3313_2785 1d7ca55f452f4df844a4cdf4b720ff1e 228 Gene3D G3DSA:3.40.109.10 46 228 3.4E-46 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TF3313_2785 1d7ca55f452f4df844a4cdf4b720ff1e 228 Pfam PF00881 Nitroreductase family 54 209 2.1E-32 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 TF3313_1660 106803654f05d72276cf6f09ac855c19 324 SUPERFAMILY SSF55347 132 292 1.44E-36 T 11-10-2018 TF3313_1660 106803654f05d72276cf6f09ac855c19 324 Gene3D G3DSA:3.30.360.10 130 292 1.8E-94 T 11-10-2018 TF3313_1660 106803654f05d72276cf6f09ac855c19 324 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 4 322 3.6E-89 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 TF3313_1660 106803654f05d72276cf6f09ac855c19 324 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 295 5.0E-5 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 TF3313_1660 106803654f05d72276cf6f09ac855c19 324 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 318 32.544 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 TF3313_1660 106803654f05d72276cf6f09ac855c19 324 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 123 3.5E-26 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 TF3313_1660 106803654f05d72276cf6f09ac855c19 324 SUPERFAMILY SSF51735 2 149 2.06E-40 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_1660 106803654f05d72276cf6f09ac855c19 324 SMART SM00859 3 124 8.0E-30 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 TF3313_1660 106803654f05d72276cf6f09ac855c19 324 Gene3D G3DSA:3.40.50.720 4 310 1.8E-94 T 11-10-2018 TF3313_1660 106803654f05d72276cf6f09ac855c19 324 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 127 143 - T 11-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 TF3313_1552 83e7306822481358b1725a72bbdb93b8 461 Pfam PF13437 HlyD family secretion protein 316 425 3.4E-11 T 11-10-2018 TF3313_0546 ddb5140bf1048e16410b7480c65be5a8 571 Pfam PF00916 Sulfate permease family 28 395 7.6E-84 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 TF3313_0546 ddb5140bf1048e16410b7480c65be5a8 571 SUPERFAMILY SSF52091 452 558 1.08E-19 T 11-10-2018 IPR036513 STAS domain superfamily TF3313_0546 ddb5140bf1048e16410b7480c65be5a8 571 Pfam PF01740 STAS domain 452 554 2.3E-15 T 11-10-2018 IPR002645 STAS domain TF3313_0546 ddb5140bf1048e16410b7480c65be5a8 571 Gene3D G3DSA:3.30.750.24 437 567 9.4E-29 T 11-10-2018 IPR036513 STAS domain superfamily TF3313_0546 ddb5140bf1048e16410b7480c65be5a8 571 TIGRFAM TIGR00815 sulP: sulfate permease 18 554 2.9E-116 T 11-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 TF3313_0220 16f54073470d434e7685efda8531877a 293 SMART SM00893 24 207 7.7E-51 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 TF3313_0220 16f54073470d434e7685efda8531877a 293 Pfam PF01012 Electron transfer flavoprotein domain 25 191 9.9E-47 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 TF3313_0220 16f54073470d434e7685efda8531877a 293 Gene3D G3DSA:3.40.50.620 1 292 8.2E-82 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_0220 16f54073470d434e7685efda8531877a 293 SUPERFAMILY SSF52402 1 286 4.19E-59 T 11-10-2018 TF3313_0220 16f54073470d434e7685efda8531877a 293 PIRSF PIRSF000090 1 293 1.3E-83 T 11-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 TF3313_0755 865c8e550557958cc9b07dab4ca518d6 428 SUPERFAMILY SSF53254 32 414 5.72E-48 T 11-10-2018 IPR029033 Histidine phosphatase superfamily TF3313_0755 865c8e550557958cc9b07dab4ca518d6 428 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 36 50 - T 11-10-2018 IPR033379 Histidine acid phosphatase active site TF3313_0755 865c8e550557958cc9b07dab4ca518d6 428 Gene3D G3DSA:3.40.50.1240 34 413 7.0E-121 T 11-10-2018 IPR029033 Histidine phosphatase superfamily TF3313_0755 865c8e550557958cc9b07dab4ca518d6 428 Gene3D G3DSA:3.40.50.1240 49 286 7.0E-121 T 11-10-2018 IPR029033 Histidine phosphatase superfamily TF3313_0755 865c8e550557958cc9b07dab4ca518d6 428 ProSitePatterns PS00778 Histidine acid phosphatases active site signature. 314 330 - T 11-10-2018 IPR033379 Histidine acid phosphatase active site TF3313_0755 865c8e550557958cc9b07dab4ca518d6 428 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 37 367 1.1E-11 T 11-10-2018 IPR000560 Histidine phosphatase superfamily, clade-2 TF3313_2707 63a369b1bfff305ad899dc1a806dc25a 822 Gene3D G3DSA:1.20.58.1480 160 284 2.5E-28 T 11-10-2018 TF3313_2707 63a369b1bfff305ad899dc1a806dc25a 822 Hamap MF_01973 Lon protease [lon]. 49 812 65.709 T 11-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 TF3313_2707 63a369b1bfff305ad899dc1a806dc25a 822 SMART SM00464 48 242 3.6E-44 T 11-10-2018 IPR003111 Lon, substrate-binding domain TF3313_2707 63a369b1bfff305ad899dc1a806dc25a 822 SUPERFAMILY SSF54211 634 810 1.59E-51 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TF3313_2707 63a369b1bfff305ad899dc1a806dc25a 822 Gene3D G3DSA:2.30.130.40 42 155 4.9E-33 T 11-10-2018 TF3313_2707 63a369b1bfff305ad899dc1a806dc25a 822 SMART SM00382 387 540 2.1E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_2707 63a369b1bfff305ad899dc1a806dc25a 822 SUPERFAMILY SSF88697 48 241 4.97E-38 T 11-10-2018 IPR015947 PUA-like superfamily TF3313_2707 63a369b1bfff305ad899dc1a806dc25a 822 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 716 724 - T 11-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 TF3313_2707 63a369b1bfff305ad899dc1a806dc25a 822 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 609 811 1.1E-83 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 TF3313_2707 63a369b1bfff305ad899dc1a806dc25a 822 TIGRFAM TIGR00763 lon: endopeptidase La 50 811 2.7E-282 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 TF3313_2707 63a369b1bfff305ad899dc1a806dc25a 822 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 49 242 1.7E-36 T 11-10-2018 IPR003111 Lon, substrate-binding domain TF3313_2707 63a369b1bfff305ad899dc1a806dc25a 822 PIRSF PIRSF001174 34 815 9.4E-288 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 TF3313_2707 63a369b1bfff305ad899dc1a806dc25a 822 Gene3D G3DSA:3.40.50.300 352 530 1.4E-66 T 11-10-2018 TF3313_2707 63a369b1bfff305ad899dc1a806dc25a 822 SUPERFAMILY SSF52540 353 627 1.85E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2707 63a369b1bfff305ad899dc1a806dc25a 822 Gene3D G3DSA:3.30.230.10 632 819 7.5E-77 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TF3313_2707 63a369b1bfff305ad899dc1a806dc25a 822 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 391 527 1.6E-21 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TF3313_2707 63a369b1bfff305ad899dc1a806dc25a 822 Gene3D G3DSA:1.10.8.60 531 623 1.1E-28 T 11-10-2018 TF3313_2707 63a369b1bfff305ad899dc1a806dc25a 822 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 713 732 8.4E-53 T 11-10-2018 TF3313_2707 63a369b1bfff305ad899dc1a806dc25a 822 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 395 414 8.4E-53 T 11-10-2018 TF3313_2707 63a369b1bfff305ad899dc1a806dc25a 822 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 743 762 8.4E-53 T 11-10-2018 TF3313_2707 63a369b1bfff305ad899dc1a806dc25a 822 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 766 784 8.4E-53 T 11-10-2018 TF3313_2707 63a369b1bfff305ad899dc1a806dc25a 822 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 634 650 8.4E-53 T 11-10-2018 TF3313_1472 69ca54ba9c3f922f4c4cd7bdfe07549f 427 SUPERFAMILY SSF75011 106 423 2.09E-8 T 11-10-2018 TF3313_1567 535256bb82abc30543a47b50f94a704a 84 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 83 5.0E-18 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1567 535256bb82abc30543a47b50f94a704a 84 Gene3D G3DSA:1.20.58.110 1 84 2.6E-22 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1567 535256bb82abc30543a47b50f94a704a 84 Pfam PF01649 Ribosomal protein S20 2 81 2.7E-25 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1567 535256bb82abc30543a47b50f94a704a 84 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 83 1.5E-17 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1567 535256bb82abc30543a47b50f94a704a 84 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 82 14.56 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1567 535256bb82abc30543a47b50f94a704a 84 SUPERFAMILY SSF46992 3 83 1.18E-22 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_0182 a9b4bccf2fa0d2f4aa1510f6ade929a7 297 PIRSF PIRSF001365 1 296 5.6E-87 T 11-10-2018 IPR002220 DapA-like GO:0016829 TF3313_0182 a9b4bccf2fa0d2f4aa1510f6ade929a7 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 39 60 2.7E-26 T 11-10-2018 IPR002220 DapA-like GO:0016829 TF3313_0182 a9b4bccf2fa0d2f4aa1510f6ade929a7 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 107 123 2.7E-26 T 11-10-2018 IPR002220 DapA-like GO:0016829 TF3313_0182 a9b4bccf2fa0d2f4aa1510f6ade929a7 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 75 93 2.7E-26 T 11-10-2018 IPR002220 DapA-like GO:0016829 TF3313_0182 a9b4bccf2fa0d2f4aa1510f6ade929a7 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 2.7E-26 T 11-10-2018 IPR002220 DapA-like GO:0016829 TF3313_0182 a9b4bccf2fa0d2f4aa1510f6ade929a7 297 Gene3D G3DSA:3.20.20.70 1 297 1.8E-101 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_0182 a9b4bccf2fa0d2f4aa1510f6ade929a7 297 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 137 168 - T 11-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 TF3313_0182 a9b4bccf2fa0d2f4aa1510f6ade929a7 297 SUPERFAMILY SSF51569 2 293 2.09E-92 T 11-10-2018 TF3313_0182 a9b4bccf2fa0d2f4aa1510f6ade929a7 297 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 11 292 3.1E-100 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TF3313_0182 a9b4bccf2fa0d2f4aa1510f6ade929a7 297 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 5 292 60.533 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TF3313_0182 a9b4bccf2fa0d2f4aa1510f6ade929a7 297 Pfam PF00701 Dihydrodipicolinate synthetase family 6 291 1.6E-82 T 11-10-2018 IPR002220 DapA-like GO:0016829 TF3313_0182 a9b4bccf2fa0d2f4aa1510f6ade929a7 297 SMART SM01130 5 294 7.4E-120 T 11-10-2018 IPR002220 DapA-like GO:0016829 TF3313_2265 775f8f8b29586043929bcd12479f791e 63 Gene3D G3DSA:3.40.50.720 1 62 3.2E-7 T 11-10-2018 TF3313_2265 775f8f8b29586043929bcd12479f791e 63 SUPERFAMILY SSF51735 3 61 3.01E-7 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_1532 6346f55df39fae4317dcef6a1e99783c 309 Pfam PF01594 AI-2E family transporter 6 292 7.3E-44 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like TF3313_0075 f675897fe2b1c13e5cb53087ebed12af 403 TIGRFAM TIGR04157 glyco_rSAM_CFB: glycosyltransferase, GG-Bacteroidales peptide system 3 401 1.1E-136 T 11-10-2018 IPR026419 Glycosyltransferase, GG-Bacteroidales peptide system TF3313_0075 f675897fe2b1c13e5cb53087ebed12af 403 Pfam PF13439 Glycosyltransferase Family 4 17 207 1.9E-12 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 TF3313_0075 f675897fe2b1c13e5cb53087ebed12af 403 Gene3D G3DSA:3.40.50.2000 12 210 6.5E-13 T 11-10-2018 TF3313_0075 f675897fe2b1c13e5cb53087ebed12af 403 Gene3D G3DSA:3.40.50.2000 211 383 8.5E-35 T 11-10-2018 TF3313_0075 f675897fe2b1c13e5cb53087ebed12af 403 SUPERFAMILY SSF53756 13 403 4.71E-57 T 11-10-2018 TF3313_0075 f675897fe2b1c13e5cb53087ebed12af 403 Pfam PF00534 Glycosyl transferases group 1 220 356 3.7E-25 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 TF3313_2044 93183ca62f7a590b7e306c266a954a52 653 SUPERFAMILY SSF48452 386 592 4.56E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2044 93183ca62f7a590b7e306c266a954a52 653 Pfam PF04932 O-Antigen ligase 141 283 3.0E-12 T 11-10-2018 IPR007016 O-antigen ligase-related TF3313_2044 93183ca62f7a590b7e306c266a954a52 653 Gene3D G3DSA:1.25.40.10 366 602 2.2E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2364 6094f5254da1e35eff4c767a8271503d 634 Pfam PF02436 Conserved carboxylase domain 376 559 3.6E-32 T 11-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 TF3313_2364 6094f5254da1e35eff4c767a8271503d 634 Pfam PF00682 HMGL-like 6 301 4.4E-25 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 TF3313_2364 6094f5254da1e35eff4c767a8271503d 634 SUPERFAMILY SSF51230 562 633 4.84E-21 T 11-10-2018 IPR011053 Single hybrid motif TF3313_2364 6094f5254da1e35eff4c767a8271503d 634 SUPERFAMILY SSF51569 1 309 6.74E-58 T 11-10-2018 TF3313_2364 6094f5254da1e35eff4c767a8271503d 634 SUPERFAMILY SSF89000 379 530 2.47E-29 T 11-10-2018 TF3313_2364 6094f5254da1e35eff4c767a8271503d 634 Pfam PF00364 Biotin-requiring enzyme 568 633 2.1E-19 T 11-10-2018 IPR000089 Biotin/lipoyl attachment TF3313_2364 6094f5254da1e35eff4c767a8271503d 634 Gene3D G3DSA:2.40.50.100 559 634 4.1E-23 T 11-10-2018 TF3313_0631 e0a314067fdc15c271d77622e53d2748 286 Gene3D G3DSA:1.10.287.80 5 282 1.8E-88 T 11-10-2018 TF3313_0631 e0a314067fdc15c271d77622e53d2748 286 Pfam PF00231 ATP synthase 3 283 1.2E-85 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0631 e0a314067fdc15c271d77622e53d2748 286 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 2 283 3.4E-79 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0631 e0a314067fdc15c271d77622e53d2748 286 PRINTS PR00126 ATP synthase gamma subunit signature 70 89 1.5E-25 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0631 e0a314067fdc15c271d77622e53d2748 286 PRINTS PR00126 ATP synthase gamma subunit signature 164 181 1.5E-25 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0631 e0a314067fdc15c271d77622e53d2748 286 PRINTS PR00126 ATP synthase gamma subunit signature 233 252 1.5E-25 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0631 e0a314067fdc15c271d77622e53d2748 286 PRINTS PR00126 ATP synthase gamma subunit signature 264 285 1.5E-25 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0631 e0a314067fdc15c271d77622e53d2748 286 SUPERFAMILY SSF52943 1 283 6.54E-70 T 11-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0631 e0a314067fdc15c271d77622e53d2748 286 Gene3D G3DSA:3.40.1380.10 59 205 1.8E-88 T 11-10-2018 TF3313_0631 e0a314067fdc15c271d77622e53d2748 286 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 286 28.55 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0057 19ddbcfc14c4f0e12f616bf53eeb2b1a 413 Pfam PF01610 Transposase 160 394 3.3E-63 T 11-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain TF3313_0057 19ddbcfc14c4f0e12f616bf53eeb2b1a 413 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 94 144 2.6E-10 T 11-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain TF3313_2895 19ddbcfc14c4f0e12f616bf53eeb2b1a 413 Pfam PF01610 Transposase 160 394 3.3E-63 T 11-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain TF3313_2895 19ddbcfc14c4f0e12f616bf53eeb2b1a 413 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 94 144 2.6E-10 T 11-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain TF3313_0799 88ee095716987cfa42178e457d1c2b56 254 SUPERFAMILY SSF55315 4 92 2.59E-12 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like TF3313_0799 88ee095716987cfa42178e457d1c2b56 254 SUPERFAMILY SSF75217 81 250 4.97E-34 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases TF3313_0799 88ee095716987cfa42178e457d1c2b56 254 Gene3D G3DSA:3.30.1330.30 1 91 3.3E-28 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like TF3313_0799 88ee095716987cfa42178e457d1c2b56 254 Gene3D G3DSA:3.40.1280.10 99 251 1.6E-41 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TF3313_0799 88ee095716987cfa42178e457d1c2b56 254 Pfam PF00588 SpoU rRNA Methylase family 103 241 1.0E-27 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 TF3313_1049 3de669e9e69c5e766853c6efca3a5dbb 193 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 11 166 39.997 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TF3313_1049 3de669e9e69c5e766853c6efca3a5dbb 193 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 13 165 2.7E-44 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TF3313_1049 3de669e9e69c5e766853c6efca3a5dbb 193 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 117 136 5.2E-23 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TF3313_1049 3de669e9e69c5e766853c6efca3a5dbb 193 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 14 27 5.2E-23 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TF3313_1049 3de669e9e69c5e766853c6efca3a5dbb 193 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 93 109 5.2E-23 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TF3313_1049 3de669e9e69c5e766853c6efca3a5dbb 193 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 71 87 5.2E-23 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TF3313_1049 3de669e9e69c5e766853c6efca3a5dbb 193 Gene3D G3DSA:3.30.420.10 11 169 2.0E-45 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TF3313_1049 3de669e9e69c5e766853c6efca3a5dbb 193 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 13 163 2.5E-41 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TF3313_1049 3de669e9e69c5e766853c6efca3a5dbb 193 SUPERFAMILY SSF53098 12 168 2.85E-44 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TF3313_1049 3de669e9e69c5e766853c6efca3a5dbb 193 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 123 160 - T 11-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 TF3313_0035 cbf3f6a8433d5a3810a49340f37f6dc1 1032 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 30 1031 1.3E-192 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_0035 cbf3f6a8433d5a3810a49340f37f6dc1 1032 Gene3D G3DSA:2.60.40.1120 30 103 3.4E-8 T 11-10-2018 TF3313_0035 cbf3f6a8433d5a3810a49340f37f6dc1 1032 Pfam PF07715 TonB-dependent Receptor Plug Domain 123 250 1.2E-20 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_0035 cbf3f6a8433d5a3810a49340f37f6dc1 1032 Gene3D G3DSA:2.40.170.20 336 888 4.6E-18 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_0035 cbf3f6a8433d5a3810a49340f37f6dc1 1032 SUPERFAMILY SSF49464 29 110 9.81E-18 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_0035 cbf3f6a8433d5a3810a49340f37f6dc1 1032 Gene3D G3DSA:2.170.130.10 104 255 1.4E-31 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_0035 cbf3f6a8433d5a3810a49340f37f6dc1 1032 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 226 256 4.5E-16 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_0035 cbf3f6a8433d5a3810a49340f37f6dc1 1032 Pfam PF13715 CarboxypepD_reg-like domain 31 111 1.6E-17 T 11-10-2018 TF3313_0035 cbf3f6a8433d5a3810a49340f37f6dc1 1032 SUPERFAMILY SSF56935 110 1031 2.38E-67 T 11-10-2018 TF3313_1995 4aa4966e9a86e4ea7b825140c3faf284 211 Gene3D G3DSA:2.120.10.30 84 188 5.0E-6 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TF3313_1995 4aa4966e9a86e4ea7b825140c3faf284 211 Pfam PF17170 6-bladed beta-propeller 50 163 1.8E-17 T 11-10-2018 TF3313_2202 c8bd9680bfca48ada51371ed92e300ed 153 Pfam PF13384 Homeodomain-like domain 56 96 7.0E-6 T 11-10-2018 TF3313_2202 c8bd9680bfca48ada51371ed92e300ed 153 SUPERFAMILY SSF46689 56 97 7.89E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TF3313_1233 c8bd9680bfca48ada51371ed92e300ed 153 Pfam PF13384 Homeodomain-like domain 56 96 7.0E-6 T 11-10-2018 TF3313_1233 c8bd9680bfca48ada51371ed92e300ed 153 SUPERFAMILY SSF46689 56 97 7.89E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TF3313_2531 34b2646f5e843e4d1041294712d83de3 96 Pfam PF00216 Bacterial DNA-binding protein 1 88 6.6E-19 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TF3313_2531 34b2646f5e843e4d1041294712d83de3 96 Gene3D G3DSA:4.10.520.10 1 95 1.9E-18 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 TF3313_2531 34b2646f5e843e4d1041294712d83de3 96 SMART SM00411 1 90 1.9E-8 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TF3313_2531 34b2646f5e843e4d1041294712d83de3 96 SUPERFAMILY SSF47729 1 91 2.5E-20 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 TF3313_2132 f768e1e19071a17c1a4f1aaefd29a385 694 Gene3D G3DSA:3.40.50.300 138 346 3.9E-15 T 11-10-2018 TF3313_2132 f768e1e19071a17c1a4f1aaefd29a385 694 Pfam PF00271 Helicase conserved C-terminal domain 378 497 5.5E-5 T 11-10-2018 IPR001650 Helicase, C-terminal TF3313_2132 f768e1e19071a17c1a4f1aaefd29a385 694 SUPERFAMILY SSF52540 173 511 4.21E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2132 f768e1e19071a17c1a4f1aaefd29a385 694 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 173 521 4.9E-97 T 11-10-2018 IPR006474 Helicase Cas3, CRISPR-associated, core TF3313_2132 f768e1e19071a17c1a4f1aaefd29a385 694 Pfam PF00270 DEAD/DEAH box helicase 170 339 5.1E-9 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TF3313_2132 f768e1e19071a17c1a4f1aaefd29a385 694 SMART SM00487 150 369 9.9E-7 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TF3313_2132 f768e1e19071a17c1a4f1aaefd29a385 694 Gene3D G3DSA:3.40.50.300 366 517 3.6E-9 T 11-10-2018 TF3313_0459 c59b7f6b44cd8d68adf9d680dea04369 496 Gene3D G3DSA:1.25.40.390 32 485 3.1E-78 T 11-10-2018 TF3313_0459 c59b7f6b44cd8d68adf9d680dea04369 496 SUPERFAMILY SSF48452 17 494 1.52E-74 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0459 c59b7f6b44cd8d68adf9d680dea04369 496 Pfam PF14322 Starch-binding associating with outer membrane 42 235 9.2E-17 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_0459 c59b7f6b44cd8d68adf9d680dea04369 496 Pfam PF07980 SusD family 363 494 5.0E-12 T 11-10-2018 IPR012944 RagB/SusD domain TF3313_0205 d9c7904ca2226d37f1dab2eee1e72578 296 SUPERFAMILY SSF57938 54 134 1.1E-19 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily TF3313_0205 d9c7904ca2226d37f1dab2eee1e72578 296 Gene3D G3DSA:2.60.260.20 179 285 2.4E-26 T 11-10-2018 TF3313_0205 d9c7904ca2226d37f1dab2eee1e72578 296 Gene3D G3DSA:2.10.230.10 67 131 2.6E-37 T 11-10-2018 TF3313_0205 d9c7904ca2226d37f1dab2eee1e72578 296 Gene3D G3DSA:2.60.260.20 37 173 2.6E-37 T 11-10-2018 TF3313_0205 d9c7904ca2226d37f1dab2eee1e72578 296 Pfam PF00684 DnaJ central domain 67 131 2.9E-14 T 11-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 TF3313_0205 d9c7904ca2226d37f1dab2eee1e72578 296 Pfam PF01556 DnaJ C terminal domain 41 257 2.8E-38 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal TF3313_0205 d9c7904ca2226d37f1dab2eee1e72578 296 SUPERFAMILY SSF49493 38 181 3.4E-16 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 TF3313_0205 d9c7904ca2226d37f1dab2eee1e72578 296 SUPERFAMILY SSF49493 185 266 3.01E-21 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 TF3313_1010 889ca93c9206cbefbdd9a57caf7b52e5 621 Gene3D G3DSA:3.40.50.670 386 620 9.6E-69 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TF3313_1010 889ca93c9206cbefbdd9a57caf7b52e5 621 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 47 176 2.5E-10 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TF3313_1010 889ca93c9206cbefbdd9a57caf7b52e5 621 Gene3D G3DSA:3.30.230.10 218 382 1.0E-36 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TF3313_1010 889ca93c9206cbefbdd9a57caf7b52e5 621 SMART SM00433 47 614 5.5E-153 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TF3313_1010 889ca93c9206cbefbdd9a57caf7b52e5 621 SUPERFAMILY SSF54211 224 374 2.66E-27 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TF3313_1010 889ca93c9206cbefbdd9a57caf7b52e5 621 PRINTS PR00418 DNA topoisomerase II family signature 515 527 2.9E-48 T 11-10-2018 TF3313_1010 889ca93c9206cbefbdd9a57caf7b52e5 621 PRINTS PR00418 DNA topoisomerase II family signature 555 571 2.9E-48 T 11-10-2018 TF3313_1010 889ca93c9206cbefbdd9a57caf7b52e5 621 PRINTS PR00418 DNA topoisomerase II family signature 81 94 2.9E-48 T 11-10-2018 TF3313_1010 889ca93c9206cbefbdd9a57caf7b52e5 621 PRINTS PR00418 DNA topoisomerase II family signature 495 512 2.9E-48 T 11-10-2018 TF3313_1010 889ca93c9206cbefbdd9a57caf7b52e5 621 PRINTS PR00418 DNA topoisomerase II family signature 477 493 2.9E-48 T 11-10-2018 TF3313_1010 889ca93c9206cbefbdd9a57caf7b52e5 621 PRINTS PR00418 DNA topoisomerase II family signature 415 429 2.9E-48 T 11-10-2018 TF3313_1010 889ca93c9206cbefbdd9a57caf7b52e5 621 PRINTS PR00418 DNA topoisomerase II family signature 116 130 2.9E-48 T 11-10-2018 TF3313_1010 889ca93c9206cbefbdd9a57caf7b52e5 621 PRINTS PR00418 DNA topoisomerase II family signature 47 62 2.9E-48 T 11-10-2018 TF3313_1010 889ca93c9206cbefbdd9a57caf7b52e5 621 PRINTS PR00418 DNA topoisomerase II family signature 258 271 2.9E-48 T 11-10-2018 TF3313_1010 889ca93c9206cbefbdd9a57caf7b52e5 621 Pfam PF01751 Toprim domain 415 518 3.3E-13 T 11-10-2018 IPR006171 TOPRIM domain TF3313_1010 889ca93c9206cbefbdd9a57caf7b52e5 621 Gene3D G3DSA:3.30.565.10 16 217 1.2E-56 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TF3313_1010 889ca93c9206cbefbdd9a57caf7b52e5 621 Pfam PF00204 DNA gyrase B 225 373 1.4E-26 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TF3313_1010 889ca93c9206cbefbdd9a57caf7b52e5 621 SMART SM00387 43 178 1.8E-4 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TF3313_1010 889ca93c9206cbefbdd9a57caf7b52e5 621 PRINTS PR01159 DNA gyrase subunit B signature 13 23 1.9E-5 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TF3313_1010 889ca93c9206cbefbdd9a57caf7b52e5 621 PRINTS PR01159 DNA gyrase subunit B signature 349 363 1.9E-5 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TF3313_1010 889ca93c9206cbefbdd9a57caf7b52e5 621 PRINTS PR01159 DNA gyrase subunit B signature 198 211 1.9E-5 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TF3313_1010 889ca93c9206cbefbdd9a57caf7b52e5 621 PRINTS PR01159 DNA gyrase subunit B signature 363 383 1.9E-5 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TF3313_1010 889ca93c9206cbefbdd9a57caf7b52e5 621 SUPERFAMILY SSF55874 13 211 5.63E-45 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TF3313_1010 889ca93c9206cbefbdd9a57caf7b52e5 621 ProSitePatterns PS00177 DNA topoisomerase II signature. 417 425 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TF3313_1010 889ca93c9206cbefbdd9a57caf7b52e5 621 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 551 609 1.7E-7 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 TF3313_1010 889ca93c9206cbefbdd9a57caf7b52e5 621 SUPERFAMILY SSF56719 401 611 2.88E-58 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TF3313_0142 9349a9b52f99068e40467028c05ba584 557 SUPERFAMILY SSF56801 14 549 2.62E-137 T 11-10-2018 TF3313_0142 9349a9b52f99068e40467028c05ba584 557 Pfam PF13193 AMP-binding enzyme C-terminal domain 459 539 8.5E-23 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TF3313_0142 9349a9b52f99068e40467028c05ba584 557 Pfam PF00501 AMP-binding enzyme 37 450 1.2E-75 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TF3313_0142 9349a9b52f99068e40467028c05ba584 557 ProSitePatterns PS00455 Putative AMP-binding domain signature. 200 211 - T 11-10-2018 IPR020845 AMP-binding, conserved site TF3313_0142 9349a9b52f99068e40467028c05ba584 557 Gene3D G3DSA:3.30.300.30 445 555 3.2E-28 T 11-10-2018 TF3313_0142 9349a9b52f99068e40467028c05ba584 557 Gene3D G3DSA:3.40.50.12780 1 444 3.4E-146 T 11-10-2018 TF3313_2225 a2dd0301572c065d2c03d1ad38fb6575 689 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 303 596 9.4E-35 T 11-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 TF3313_2225 a2dd0301572c065d2c03d1ad38fb6575 689 Gene3D G3DSA:2.60.120.260 26 175 9.4E-54 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_2225 a2dd0301572c065d2c03d1ad38fb6575 689 Gene3D G3DSA:2.60.40.10 605 687 1.1E-21 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_2225 a2dd0301572c065d2c03d1ad38fb6575 689 SUPERFAMILY SSF49303 187 292 4.89E-15 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily TF3313_2225 a2dd0301572c065d2c03d1ad38fb6575 689 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 57 172 4.3E-18 T 11-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 TF3313_2225 a2dd0301572c065d2c03d1ad38fb6575 689 Gene3D G3DSA:3.20.20.80 295 604 5.3E-102 T 11-10-2018 TF3313_2225 a2dd0301572c065d2c03d1ad38fb6575 689 Pfam PF00703 Glycosyl hydrolases family 2 189 293 9.6E-14 T 11-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 TF3313_2225 a2dd0301572c065d2c03d1ad38fb6575 689 Gene3D G3DSA:2.60.40.10 176 294 5.0E-26 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_2225 a2dd0301572c065d2c03d1ad38fb6575 689 SUPERFAMILY SSF49785 16 175 2.69E-38 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_2225 a2dd0301572c065d2c03d1ad38fb6575 689 PRINTS PR00132 Glycosyl hydrolase family 2 signature 408 423 1.3E-12 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 TF3313_2225 a2dd0301572c065d2c03d1ad38fb6575 689 PRINTS PR00132 Glycosyl hydrolase family 2 signature 305 319 1.3E-12 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 TF3313_2225 a2dd0301572c065d2c03d1ad38fb6575 689 PRINTS PR00132 Glycosyl hydrolase family 2 signature 101 116 1.3E-12 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 TF3313_2225 a2dd0301572c065d2c03d1ad38fb6575 689 PRINTS PR00132 Glycosyl hydrolase family 2 signature 336 354 1.3E-12 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 TF3313_2225 a2dd0301572c065d2c03d1ad38fb6575 689 Pfam PF16355 Domain of unknown function (DUF4982) 622 671 5.0E-9 T 11-10-2018 IPR032311 Domain of unknown function DUF4982 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 TF3313_2225 a2dd0301572c065d2c03d1ad38fb6575 689 SUPERFAMILY SSF51445 299 602 1.81E-70 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily TF3313_2177 314a09b25a1916ceadc822cd3bdffc4c 165 Pfam PF00216 Bacterial DNA-binding protein 76 164 8.5E-29 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TF3313_2177 314a09b25a1916ceadc822cd3bdffc4c 165 PRINTS PR01727 Prokaryotic integration host factor signature 115 130 1.9E-9 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TF3313_2177 314a09b25a1916ceadc822cd3bdffc4c 165 PRINTS PR01727 Prokaryotic integration host factor signature 133 146 1.9E-9 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TF3313_2177 314a09b25a1916ceadc822cd3bdffc4c 165 PRINTS PR01727 Prokaryotic integration host factor signature 149 163 1.9E-9 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TF3313_2177 314a09b25a1916ceadc822cd3bdffc4c 165 SUPERFAMILY SSF47729 76 165 2.5E-27 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 TF3313_2177 314a09b25a1916ceadc822cd3bdffc4c 165 Gene3D G3DSA:4.10.520.10 76 165 2.7E-31 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 TF3313_2177 314a09b25a1916ceadc822cd3bdffc4c 165 SMART SM00411 76 165 1.3E-36 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TF3313_2177 314a09b25a1916ceadc822cd3bdffc4c 165 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 121 140 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 TF3313_0344 84e762420acf6a87e67add93f745e4f0 487 SUPERFAMILY SSF63418 1 101 5.23E-23 T 11-10-2018 IPR035911 MurE/MurF, N-terminal TF3313_0344 84e762420acf6a87e67add93f745e4f0 487 Pfam PF08245 Mur ligase middle domain 110 305 1.9E-47 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TF3313_0344 84e762420acf6a87e67add93f745e4f0 487 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 21 481 5.7E-151 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 TF3313_0344 84e762420acf6a87e67add93f745e4f0 487 Pfam PF01225 Mur ligase family, catalytic domain 22 98 5.2E-15 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 TF3313_0344 84e762420acf6a87e67add93f745e4f0 487 SUPERFAMILY SSF53244 326 482 2.9E-45 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TF3313_0344 84e762420acf6a87e67add93f745e4f0 487 Gene3D G3DSA:3.90.190.20 336 486 4.5E-55 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TF3313_0344 84e762420acf6a87e67add93f745e4f0 487 Gene3D G3DSA:3.40.1390.10 1 100 1.3E-26 T 11-10-2018 TF3313_0344 84e762420acf6a87e67add93f745e4f0 487 Pfam PF02875 Mur ligase family, glutamate ligase domain 326 414 4.2E-17 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 TF3313_0344 84e762420acf6a87e67add93f745e4f0 487 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 482 33.508 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 TF3313_0344 84e762420acf6a87e67add93f745e4f0 487 SUPERFAMILY SSF53623 101 325 2.62E-68 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TF3313_0344 84e762420acf6a87e67add93f745e4f0 487 Gene3D G3DSA:3.40.1190.10 101 330 6.7E-74 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TF3313_1187 17a2be9a425cccb20d1a29acd8bdbd14 330 TIGRFAM TIGR03519 T9SS_PorP_fam: type IX secretion system membrane protein, PorP/SprF family 3 311 2.6E-54 T 11-10-2018 IPR019861 Type IX secretion system membrane protein, PorP/SprF family TF3313_1187 17a2be9a425cccb20d1a29acd8bdbd14 330 Pfam PF11751 Type IX secretion system membrane protein PorP/SprF 22 310 2.2E-50 T 11-10-2018 IPR019861 Type IX secretion system membrane protein, PorP/SprF family TF3313_1846 8b9714591283dd8bcc49aeef328b9842 511 SUPERFAMILY SSF55874 340 508 4.19E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TF3313_1846 8b9714591283dd8bcc49aeef328b9842 511 SUPERFAMILY SSF47384 271 349 1.26E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TF3313_1846 8b9714591283dd8bcc49aeef328b9842 511 SMART SM00387 396 510 7.1E-35 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TF3313_1846 8b9714591283dd8bcc49aeef328b9842 511 Pfam PF00512 His Kinase A (phospho-acceptor) domain 282 348 1.0E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TF3313_1846 8b9714591283dd8bcc49aeef328b9842 511 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 7.5E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_1846 8b9714591283dd8bcc49aeef328b9842 511 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 463 7.5E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_1846 8b9714591283dd8bcc49aeef328b9842 511 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 449 7.5E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_1846 8b9714591283dd8bcc49aeef328b9842 511 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 7.5E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_1846 8b9714591283dd8bcc49aeef328b9842 511 Gene3D G3DSA:3.30.565.10 355 510 3.2E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TF3313_1846 8b9714591283dd8bcc49aeef328b9842 511 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 397 508 3.3E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TF3313_1846 8b9714591283dd8bcc49aeef328b9842 511 SMART SM00388 282 350 1.4E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TF3313_1846 8b9714591283dd8bcc49aeef328b9842 511 Gene3D G3DSA:1.10.287.130 273 354 7.3E-15 T 11-10-2018 TF3313_1061 4bf16be4733cd3c09375382ac6f8e0ff 92 SUPERFAMILY SSF103481 7 91 2.22E-14 T 11-10-2018 TF3313_1061 4bf16be4733cd3c09375382ac6f8e0ff 92 Pfam PF00892 EamA-like transporter family 9 91 1.2E-10 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TF3313_1061 4bf16be4733cd3c09375382ac6f8e0ff 92 Gene3D G3DSA:1.10.3730.20 3 92 4.1E-6 T 11-10-2018 TF3313_1970 43e3039ff0f56900cabe2e24b97c0969 383 ProSitePatterns PS00905 GTP1/OBG family signature. 216 229 - T 11-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 TF3313_1970 43e3039ff0f56900cabe2e24b97c0969 383 Hamap MF_01454 GTPase Obg [obg]. 5 329 45.825 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 TF3313_1970 43e3039ff0f56900cabe2e24b97c0969 383 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 165 185 1.5E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TF3313_1970 43e3039ff0f56900cabe2e24b97c0969 383 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 214 229 1.5E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TF3313_1970 43e3039ff0f56900cabe2e24b97c0969 383 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 231 249 1.5E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TF3313_1970 43e3039ff0f56900cabe2e24b97c0969 383 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 186 204 1.5E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TF3313_1970 43e3039ff0f56900cabe2e24b97c0969 383 Pfam PF01926 50S ribosome-binding GTPase 164 283 2.8E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TF3313_1970 43e3039ff0f56900cabe2e24b97c0969 383 PIRSF PIRSF002401 3 367 4.3E-129 T 11-10-2018 IPR035101 GTP-binding protein, Obg-type TF3313_1970 43e3039ff0f56900cabe2e24b97c0969 383 SUPERFAMILY SSF52540 156 329 8.94E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1970 43e3039ff0f56900cabe2e24b97c0969 383 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 6 328 4.1E-131 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 TF3313_1970 43e3039ff0f56900cabe2e24b97c0969 383 SUPERFAMILY SSF82051 5 161 4.32E-53 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily TF3313_1970 43e3039ff0f56900cabe2e24b97c0969 383 Gene3D G3DSA:3.40.50.300 162 339 1.8E-49 T 11-10-2018 TF3313_1970 43e3039ff0f56900cabe2e24b97c0969 383 Pfam PF01018 GTP1/OBG 7 161 8.3E-57 T 11-10-2018 IPR006169 GTP1/OBG domain TF3313_1970 43e3039ff0f56900cabe2e24b97c0969 383 Gene3D G3DSA:2.70.210.12 2 161 8.2E-55 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily TF3313_1467 9c2d3982a84d7d592c8dd2eb1462f366 262 Gene3D G3DSA:2.50.20.10 15 259 1.6E-86 T 11-10-2018 TF3313_1467 9c2d3982a84d7d592c8dd2eb1462f366 262 Pfam PF17131 Outer membrane lipoprotein-sorting protein 74 259 4.0E-69 T 11-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein TF3313_1795 f4a707cfc9d8ee451e6b1982d3d54f09 577 SUPERFAMILY SSF52518 374 573 7.94E-25 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold TF3313_1795 f4a707cfc9d8ee451e6b1982d3d54f09 577 Gene3D G3DSA:3.40.50.970 381 571 1.7E-46 T 11-10-2018 TF3313_1795 f4a707cfc9d8ee451e6b1982d3d54f09 577 PIRSF PIRSF004983 1 572 1.4E-123 T 11-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 TF3313_1795 f4a707cfc9d8ee451e6b1982d3d54f09 577 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 10 172 4.1E-26 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 TF3313_1795 f4a707cfc9d8ee451e6b1982d3d54f09 577 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 4 568 28.477 T 11-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 TF3313_1795 f4a707cfc9d8ee451e6b1982d3d54f09 577 Gene3D G3DSA:3.40.50.970 2 174 1.9E-56 T 11-10-2018 TF3313_1795 f4a707cfc9d8ee451e6b1982d3d54f09 577 SUPERFAMILY SSF52518 10 177 1.43E-29 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold TF3313_1795 f4a707cfc9d8ee451e6b1982d3d54f09 577 Gene3D G3DSA:3.40.50.1220 205 373 4.4E-26 T 11-10-2018 TF3313_1795 f4a707cfc9d8ee451e6b1982d3d54f09 577 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 11 443 5.5E-120 T 11-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 TF3313_2304 5569045b9283f3a5677b06172943a98b 562 SUPERFAMILY SSF48452 21 558 8.72E-85 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2304 5569045b9283f3a5677b06172943a98b 562 Pfam PF07980 SusD family 272 561 3.6E-23 T 11-10-2018 IPR012944 RagB/SusD domain TF3313_2304 5569045b9283f3a5677b06172943a98b 562 Pfam PF14322 Starch-binding associating with outer membrane 91 223 3.2E-12 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_0012 a18cd5a8766911b2aedd3f4aaefd5b5e 57 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 27 38 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TF3313_0012 a18cd5a8766911b2aedd3f4aaefd5b5e 57 Gene3D G3DSA:3.30.70.20 1 52 5.9E-7 T 11-10-2018 TF3313_0012 a18cd5a8766911b2aedd3f4aaefd5b5e 57 SUPERFAMILY SSF54862 3 52 2.42E-8 T 11-10-2018 TF3313_0991 68b78922eec58dacb1b3aafa57684963 430 SUPERFAMILY SSF53383 26 402 2.76E-65 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TF3313_0991 68b78922eec58dacb1b3aafa57684963 430 Pfam PF00202 Aminotransferase class-III 30 343 2.8E-32 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TF3313_0991 68b78922eec58dacb1b3aafa57684963 430 Gene3D G3DSA:3.90.1150.10 5 399 1.3E-98 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TF3313_0991 68b78922eec58dacb1b3aafa57684963 430 Gene3D G3DSA:3.40.640.10 66 306 1.3E-98 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TF3313_2802 6833ce5735fad33ae7180732171697a1 479 Pfam PF04326 Putative DNA-binding domain 11 128 7.8E-22 T 11-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 TF3313_2802 6833ce5735fad33ae7180732171697a1 479 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 290 383 1.3E-23 T 11-10-2018 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain TF3313_2802 6833ce5735fad33ae7180732171697a1 479 Gene3D G3DSA:3.30.565.60 217 377 1.4E-33 T 11-10-2018 IPR038475 RecG, C-terminal domain superfamily TF3313_2802 6833ce5735fad33ae7180732171697a1 479 Gene3D G3DSA:3.30.950.30 4 135 3.4E-24 T 11-10-2018 IPR038461 Schlafen, AAA domain superfamily TF3313_0161 d128eebcc7e9b04c0658159015cd8ba4 306 Gene3D G3DSA:3.40.50.720 103 277 5.0E-87 T 11-10-2018 TF3313_0161 d128eebcc7e9b04c0658159015cd8ba4 306 Gene3D G3DSA:3.40.50.720 23 300 5.0E-87 T 11-10-2018 TF3313_0161 d128eebcc7e9b04c0658159015cd8ba4 306 SUPERFAMILY SSF52283 18 123 3.4E-35 T 11-10-2018 TF3313_0161 d128eebcc7e9b04c0658159015cd8ba4 306 SUPERFAMILY SSF51735 105 253 2.9E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_0161 d128eebcc7e9b04c0658159015cd8ba4 306 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 26 305 2.3E-32 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 TF3313_0161 d128eebcc7e9b04c0658159015cd8ba4 306 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 184 206 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site TF3313_0161 d128eebcc7e9b04c0658159015cd8ba4 306 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 125 254 4.2E-34 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 TF3313_1263 824bbd0122dcd6af9655bdd03dae297f 885 Gene3D G3DSA:2.60.120.260 29 182 6.0E-48 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_1263 824bbd0122dcd6af9655bdd03dae297f 885 Gene3D G3DSA:2.60.40.10 183 301 5.7E-23 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_1263 824bbd0122dcd6af9655bdd03dae297f 885 Pfam PF00703 Glycosyl hydrolases family 2 197 301 1.2E-13 T 11-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 TF3313_1263 824bbd0122dcd6af9655bdd03dae297f 885 Pfam PF11721 Di-glucose binding within endoplasmic reticulum 712 877 7.5E-9 T 11-10-2018 IPR021720 Malectin domain Reactome: R-HSA-532668|Reactome: R-HSA-6798695 TF3313_1263 824bbd0122dcd6af9655bdd03dae297f 885 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 309 607 6.6E-30 T 11-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 TF3313_1263 824bbd0122dcd6af9655bdd03dae297f 885 PRINTS PR00132 Glycosyl hydrolase family 2 signature 108 123 2.8E-12 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 TF3313_1263 824bbd0122dcd6af9655bdd03dae297f 885 PRINTS PR00132 Glycosyl hydrolase family 2 signature 313 327 2.8E-12 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 TF3313_1263 824bbd0122dcd6af9655bdd03dae297f 885 PRINTS PR00132 Glycosyl hydrolase family 2 signature 409 424 2.8E-12 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 TF3313_1263 824bbd0122dcd6af9655bdd03dae297f 885 PRINTS PR00132 Glycosyl hydrolase family 2 signature 344 362 2.8E-12 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 TF3313_1263 824bbd0122dcd6af9655bdd03dae297f 885 SUPERFAMILY SSF49303 196 301 1.47E-11 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily TF3313_1263 824bbd0122dcd6af9655bdd03dae297f 885 Gene3D G3DSA:2.60.120.430 708 882 5.4E-12 T 11-10-2018 TF3313_1263 824bbd0122dcd6af9655bdd03dae297f 885 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 34 181 3.3E-18 T 11-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 TF3313_1263 824bbd0122dcd6af9655bdd03dae297f 885 SUPERFAMILY SSF49785 30 182 1.42E-40 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_1263 824bbd0122dcd6af9655bdd03dae297f 885 SUPERFAMILY SSF51445 306 612 7.17E-67 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily TF3313_1263 824bbd0122dcd6af9655bdd03dae297f 885 Gene3D G3DSA:3.20.20.80 307 615 6.8E-80 T 11-10-2018 TF3313_0281 cdd9b6ac549f01f06bd24ee74d4b9ed7 450 Pfam PF01609 Transposase DDE domain 272 413 8.4E-8 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 TF3313_0281 cdd9b6ac549f01f06bd24ee74d4b9ed7 450 Pfam PF05598 Transposase domain (DUF772) 52 125 9.6E-15 T 11-10-2018 IPR008490 Transposase InsH, N-terminal TF3313_1600 cdd9b6ac549f01f06bd24ee74d4b9ed7 450 Pfam PF01609 Transposase DDE domain 272 413 8.4E-8 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 TF3313_1600 cdd9b6ac549f01f06bd24ee74d4b9ed7 450 Pfam PF05598 Transposase domain (DUF772) 52 125 9.6E-15 T 11-10-2018 IPR008490 Transposase InsH, N-terminal TF3313_2303 cdd9b6ac549f01f06bd24ee74d4b9ed7 450 Pfam PF01609 Transposase DDE domain 272 413 8.4E-8 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 TF3313_2303 cdd9b6ac549f01f06bd24ee74d4b9ed7 450 Pfam PF05598 Transposase domain (DUF772) 52 125 9.6E-15 T 11-10-2018 IPR008490 Transposase InsH, N-terminal TF3313_2363 cdd9b6ac549f01f06bd24ee74d4b9ed7 450 Pfam PF01609 Transposase DDE domain 272 413 8.4E-8 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 TF3313_2363 cdd9b6ac549f01f06bd24ee74d4b9ed7 450 Pfam PF05598 Transposase domain (DUF772) 52 125 9.6E-15 T 11-10-2018 IPR008490 Transposase InsH, N-terminal TF3313_1808 cdd9b6ac549f01f06bd24ee74d4b9ed7 450 Pfam PF01609 Transposase DDE domain 272 413 8.4E-8 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 TF3313_1808 cdd9b6ac549f01f06bd24ee74d4b9ed7 450 Pfam PF05598 Transposase domain (DUF772) 52 125 9.6E-15 T 11-10-2018 IPR008490 Transposase InsH, N-terminal TF3313_1033 cdd9b6ac549f01f06bd24ee74d4b9ed7 450 Pfam PF01609 Transposase DDE domain 272 413 8.4E-8 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 TF3313_1033 cdd9b6ac549f01f06bd24ee74d4b9ed7 450 Pfam PF05598 Transposase domain (DUF772) 52 125 9.6E-15 T 11-10-2018 IPR008490 Transposase InsH, N-terminal TF3313_0190 f8e88824ef30c2321bb6e168c450a0ff 273 SUPERFAMILY SSF51621 11 273 2.56E-101 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TF3313_0190 f8e88824ef30c2321bb6e168c450a0ff 273 PIRSF PIRSF000388 3 273 1.4E-107 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 TF3313_0190 f8e88824ef30c2321bb6e168c450a0ff 273 Pfam PF02548 Ketopantoate hydroxymethyltransferase 11 268 3.4E-111 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 TF3313_0190 f8e88824ef30c2321bb6e168c450a0ff 273 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 12 273 5.6E-96 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 TF3313_0190 f8e88824ef30c2321bb6e168c450a0ff 273 Gene3D G3DSA:3.20.20.60 9 273 5.3E-110 T 11-10-2018 TF3313_0190 f8e88824ef30c2321bb6e168c450a0ff 273 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 12 273 41.404 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 TF3313_1838 3bf7495ab0bba14768eab4ae77e83357 190 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 110 138 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 TF3313_1838 3bf7495ab0bba14768eab4ae77e83357 190 SUPERFAMILY SSF51161 4 182 1.24E-46 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily TF3313_1838 3bf7495ab0bba14768eab4ae77e83357 190 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 102 136 5.2E-7 T 11-10-2018 IPR001451 Hexapeptide repeat TF3313_1838 3bf7495ab0bba14768eab4ae77e83357 190 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 14 48 1.1E-10 T 11-10-2018 IPR001451 Hexapeptide repeat TF3313_1838 3bf7495ab0bba14768eab4ae77e83357 190 Gene3D G3DSA:2.160.10.10 3 151 5.0E-45 T 11-10-2018 TF3313_0024 a1a51d4c559cd58b6ac15529f92f663b 233 Pfam PF02308 MgtC family 22 149 1.9E-37 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TF3313_0024 a1a51d4c559cd58b6ac15529f92f663b 233 PRINTS PR01837 MgtC/SapB protein signature 76 98 7.4E-41 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TF3313_0024 a1a51d4c559cd58b6ac15529f92f663b 233 PRINTS PR01837 MgtC/SapB protein signature 103 127 7.4E-41 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TF3313_0024 a1a51d4c559cd58b6ac15529f92f663b 233 PRINTS PR01837 MgtC/SapB protein signature 44 62 7.4E-41 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TF3313_0024 a1a51d4c559cd58b6ac15529f92f663b 233 PRINTS PR01837 MgtC/SapB protein signature 25 44 7.4E-41 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TF3313_2453 5778d897f366926c2705d9d278d172a0 495 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 446 1.6E-9 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 TF3313_2453 5778d897f366926c2705d9d278d172a0 495 SUPERFAMILY SSF53067 253 488 1.52E-36 T 11-10-2018 TF3313_2453 5778d897f366926c2705d9d278d172a0 495 PIRSF PIRSF000538 1 495 2.0E-90 T 11-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 TF3313_2453 5778d897f366926c2705d9d278d172a0 495 Gene3D G3DSA:3.30.420.40 1 239 1.3E-66 T 11-10-2018 TF3313_2453 5778d897f366926c2705d9d278d172a0 495 Gene3D G3DSA:3.30.420.40 252 494 6.1E-42 T 11-10-2018 TF3313_2453 5778d897f366926c2705d9d278d172a0 495 SUPERFAMILY SSF53067 2 251 9.72E-58 T 11-10-2018 TF3313_2453 5778d897f366926c2705d9d278d172a0 495 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 2 245 1.1E-51 T 11-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 TF3313_0286 36bbe1b994ef3d6b6624c421f8a03825 184 Pfam PF02661 Fic/DOC family 83 133 2.3E-9 T 11-10-2018 IPR003812 Fido domain TF3313_0286 36bbe1b994ef3d6b6624c421f8a03825 184 SUPERFAMILY SSF140931 99 140 8.63E-7 T 11-10-2018 IPR036597 Fido-like domain superfamily TF3313_0286 36bbe1b994ef3d6b6624c421f8a03825 184 Gene3D G3DSA:1.20.120.1870 51 182 1.8E-16 T 11-10-2018 TF3313_0835 62f9722790e28e9492fa30a48248effb 485 Gene3D G3DSA:3.30.565.10 341 485 4.1E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TF3313_0835 62f9722790e28e9492fa30a48248effb 485 Gene3D G3DSA:1.10.287.130 253 331 3.4E-7 T 11-10-2018 TF3313_0835 62f9722790e28e9492fa30a48248effb 485 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 375 484 2.0E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TF3313_0835 62f9722790e28e9492fa30a48248effb 485 SMART SM00387 374 485 1.1E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TF3313_0835 62f9722790e28e9492fa30a48248effb 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 440 2.2E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_0835 62f9722790e28e9492fa30a48248effb 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 465 2.2E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_0835 62f9722790e28e9492fa30a48248effb 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 426 2.2E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_0835 62f9722790e28e9492fa30a48248effb 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 484 2.2E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_0835 62f9722790e28e9492fa30a48248effb 485 SUPERFAMILY SSF47384 250 325 5.1E-7 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TF3313_0835 62f9722790e28e9492fa30a48248effb 485 SUPERFAMILY SSF55874 321 484 1.44E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TF3313_1314 60003db434f11a9f174e390f86836d60 89 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 11-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 TF3313_1314 60003db434f11a9f174e390f86836d60 89 PRINTS PR00297 10kDa chaperonin signature 55 67 7.6E-31 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TF3313_1314 60003db434f11a9f174e390f86836d60 89 PRINTS PR00297 10kDa chaperonin signature 3 18 7.6E-31 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TF3313_1314 60003db434f11a9f174e390f86836d60 89 PRINTS PR00297 10kDa chaperonin signature 76 89 7.6E-31 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TF3313_1314 60003db434f11a9f174e390f86836d60 89 PRINTS PR00297 10kDa chaperonin signature 25 46 7.6E-31 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TF3313_1314 60003db434f11a9f174e390f86836d60 89 SMART SM00883 2 89 2.6E-49 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TF3313_1314 60003db434f11a9f174e390f86836d60 89 Hamap MF_00580 10 kDa chaperonin [groS]. 2 89 22.702 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TF3313_1314 60003db434f11a9f174e390f86836d60 89 Pfam PF00166 Chaperonin 10 Kd subunit 2 89 6.9E-32 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TF3313_1314 60003db434f11a9f174e390f86836d60 89 Gene3D G3DSA:2.30.33.40 1 89 5.2E-34 T 11-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 TF3313_1314 60003db434f11a9f174e390f86836d60 89 SUPERFAMILY SSF50129 1 89 8.63E-31 T 11-10-2018 IPR011032 GroES-like superfamily TF3313_1006 31b11092c4d883eb5734d3bcebd5d23f 354 SUPERFAMILY SSF51735 11 164 8.97E-43 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_1006 31b11092c4d883eb5734d3bcebd5d23f 354 SUPERFAMILY SSF55347 135 296 1.62E-30 T 11-10-2018 TF3313_1006 31b11092c4d883eb5734d3bcebd5d23f 354 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 12 127 7.7E-24 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 TF3313_1006 31b11092c4d883eb5734d3bcebd5d23f 354 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 142 203 7.6E-12 T 11-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 TF3313_0536 b59d467ad0c9878d6bcb5b544b5c12a1 74 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 6 74 24.456 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor TF3313_0536 b59d467ad0c9878d6bcb5b544b5c12a1 74 SMART SM01234 6 73 4.1E-43 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor TF3313_0536 b59d467ad0c9878d6bcb5b544b5c12a1 74 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 21 73 1.0E-19 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor TF3313_0536 b59d467ad0c9878d6bcb5b544b5c12a1 74 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 14 74 1.2E-26 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor TF3313_0536 b59d467ad0c9878d6bcb5b544b5c12a1 74 Pfam PF01809 Haemolytic domain 8 73 1.1E-30 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor TF3313_2652 3af630004c8568fe0253693cfc568222 443 Pfam PF16215 Protein of unknown function (DUF4876) 213 438 4.0E-24 T 11-10-2018 IPR032627 Protein of unknown function DUF4876 TF3313_2119 0d0968390258696a1c304fc8730ab0f0 731 Pfam PF12437 Glutamine synthetase type III N terminal 29 188 1.8E-72 T 11-10-2018 IPR022147 Glutamine synthetase type III N-terminal GO:0004356 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TF3313_2119 0d0968390258696a1c304fc8730ab0f0 731 SUPERFAMILY SSF55931 180 598 7.16E-68 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 TF3313_2119 0d0968390258696a1c304fc8730ab0f0 731 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 333 348 - T 11-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 TF3313_2119 0d0968390258696a1c304fc8730ab0f0 731 Pfam PF00120 Glutamine synthetase, catalytic domain 210 359 3.4E-17 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TF3313_2119 0d0968390258696a1c304fc8730ab0f0 731 SMART SM01230 202 495 4.0E-35 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TF3313_2119 0d0968390258696a1c304fc8730ab0f0 731 Gene3D G3DSA:1.20.120.1560 583 731 1.1E-45 T 11-10-2018 TF3313_0101 ca293dd309a3ab6592d0d1227993e04f 172 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 26 40 1.1E-7 T 11-10-2018 TF3313_0101 ca293dd309a3ab6592d0d1227993e04f 172 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 56 72 1.1E-7 T 11-10-2018 TF3313_0101 ca293dd309a3ab6592d0d1227993e04f 172 Pfam PF00117 Glutamine amidotransferase class-I 8 168 9.4E-35 T 11-10-2018 IPR017926 Glutamine amidotransferase TF3313_0101 ca293dd309a3ab6592d0d1227993e04f 172 PRINTS PR00096 Glutamine amidotransferase superfamily signature 148 161 1.2E-13 T 11-10-2018 TF3313_0101 ca293dd309a3ab6592d0d1227993e04f 172 PRINTS PR00096 Glutamine amidotransferase superfamily signature 29 38 1.2E-13 T 11-10-2018 TF3313_0101 ca293dd309a3ab6592d0d1227993e04f 172 PRINTS PR00096 Glutamine amidotransferase superfamily signature 56 67 1.2E-13 T 11-10-2018 TF3313_0101 ca293dd309a3ab6592d0d1227993e04f 172 SUPERFAMILY SSF52317 7 170 2.2E-40 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TF3313_0101 ca293dd309a3ab6592d0d1227993e04f 172 Gene3D G3DSA:3.40.50.880 1 172 2.3E-42 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TF3313_0101 ca293dd309a3ab6592d0d1227993e04f 172 PRINTS PR00097 Anthranilate synthase component II signature 56 67 8.5E-20 T 11-10-2018 TF3313_0101 ca293dd309a3ab6592d0d1227993e04f 172 PRINTS PR00097 Anthranilate synthase component II signature 103 115 8.5E-20 T 11-10-2018 TF3313_0101 ca293dd309a3ab6592d0d1227993e04f 172 PRINTS PR00097 Anthranilate synthase component II signature 148 161 8.5E-20 T 11-10-2018 TF3313_0101 ca293dd309a3ab6592d0d1227993e04f 172 PRINTS PR00097 Anthranilate synthase component II signature 81 89 8.5E-20 T 11-10-2018 TF3313_0101 ca293dd309a3ab6592d0d1227993e04f 172 PRINTS PR00097 Anthranilate synthase component II signature 29 38 8.5E-20 T 11-10-2018 TF3313_0390 0b3d1cedfbc56a738cc8d3be46990066 250 SUPERFAMILY SSF54637 9 132 2.56E-31 T 11-10-2018 IPR029069 HotDog domain superfamily TF3313_0390 0b3d1cedfbc56a738cc8d3be46990066 250 Pfam PF01643 Acyl-ACP thioesterase 14 249 1.3E-37 T 11-10-2018 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 TF3313_0390 0b3d1cedfbc56a738cc8d3be46990066 250 Gene3D G3DSA:3.10.129.10 7 148 3.9E-38 T 11-10-2018 TF3313_0390 0b3d1cedfbc56a738cc8d3be46990066 250 SUPERFAMILY SSF54637 158 249 4.41E-14 T 11-10-2018 IPR029069 HotDog domain superfamily TF3313_0390 0b3d1cedfbc56a738cc8d3be46990066 250 Gene3D G3DSA:3.10.129.10 156 250 1.5E-17 T 11-10-2018 TF3313_1944 047478f56d07fa234ccd5b9eb85e11d4 404 Gene3D G3DSA:3.20.140.10 2 401 1.9E-133 T 11-10-2018 TF3313_1944 047478f56d07fa234ccd5b9eb85e11d4 404 SUPERFAMILY SSF51690 119 392 1.16E-66 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 TF3313_1944 047478f56d07fa234ccd5b9eb85e11d4 404 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 165 362 4.7E-45 T 11-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 TF3313_1944 047478f56d07fa234ccd5b9eb85e11d4 404 SUPERFAMILY SSF54675 2 136 7.06E-31 T 11-10-2018 TF3313_1944 047478f56d07fa234ccd5b9eb85e11d4 404 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 4 396 5.5E-107 T 11-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 TF3313_1944 047478f56d07fa234ccd5b9eb85e11d4 404 PIRSF PIRSF000484 1 399 1.0E-56 T 11-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 TF3313_0337 c5f237ad6a05f5ecda8af912c55b72e3 440 Gene3D G3DSA:3.30.1490.110 83 166 7.4E-77 T 11-10-2018 TF3313_0337 c5f237ad6a05f5ecda8af912c55b72e3 440 Pfam PF02491 SHS2 domain inserted in FTSA 83 158 1.0E-6 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 TF3313_0337 c5f237ad6a05f5ecda8af912c55b72e3 440 Pfam PF14450 Cell division protein FtsA 205 372 1.4E-20 T 11-10-2018 TF3313_0337 c5f237ad6a05f5ecda8af912c55b72e3 440 PIRSF PIRSF003101 1 437 3.0E-89 T 11-10-2018 IPR020823 Cell division protein FtsA TF3313_0337 c5f237ad6a05f5ecda8af912c55b72e3 440 Gene3D G3DSA:3.90.640.10 233 296 7.4E-77 T 11-10-2018 TF3313_0337 c5f237ad6a05f5ecda8af912c55b72e3 440 SMART SM00842 6 194 1.6E-19 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 TF3313_0337 c5f237ad6a05f5ecda8af912c55b72e3 440 Hamap MF_02033 Cell division protein FtsA [ftsA]. 2 437 20.698 T 11-10-2018 IPR020823 Cell division protein FtsA TF3313_0337 c5f237ad6a05f5ecda8af912c55b72e3 440 SUPERFAMILY SSF53067 197 370 2.18E-31 T 11-10-2018 TF3313_0337 c5f237ad6a05f5ecda8af912c55b72e3 440 SUPERFAMILY SSF53067 4 206 2.23E-14 T 11-10-2018 TF3313_0337 c5f237ad6a05f5ecda8af912c55b72e3 440 Gene3D G3DSA:3.30.420.40 11 371 7.4E-77 T 11-10-2018 TF3313_0337 c5f237ad6a05f5ecda8af912c55b72e3 440 Gene3D G3DSA:3.30.420.40 195 348 7.4E-77 T 11-10-2018 TF3313_0337 c5f237ad6a05f5ecda8af912c55b72e3 440 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 6 375 5.3E-69 T 11-10-2018 IPR020823 Cell division protein FtsA TF3313_0625 34f5448207206d9c94c8009757dde4ea 109 Gene3D G3DSA:1.10.10.10 1 109 3.5E-40 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_0625 34f5448207206d9c94c8009757dde4ea 109 SUPERFAMILY SSF46785 8 106 4.65E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TF3313_0625 34f5448207206d9c94c8009757dde4ea 109 Pfam PF03551 Transcriptional regulator PadR-like family 19 90 1.1E-20 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal TF3313_0969 5fae371878b72a7b0b672faccd5736ef 938 SUPERFAMILY SSF52540 21 563 1.15E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0969 5fae371878b72a7b0b672faccd5736ef 938 Gene3D G3DSA:3.40.50.300 18 588 8.4E-217 T 11-10-2018 TF3313_0969 5fae371878b72a7b0b672faccd5736ef 938 Gene3D G3DSA:1.20.1580.10 102 486 8.4E-217 T 11-10-2018 TF3313_0969 5fae371878b72a7b0b672faccd5736ef 938 Gene3D G3DSA:1.20.1580.10 684 826 1.9E-129 T 11-10-2018 TF3313_0969 5fae371878b72a7b0b672faccd5736ef 938 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TF3313_0969 5fae371878b72a7b0b672faccd5736ef 938 Gene3D G3DSA:1.10.8.280 300 397 8.4E-217 T 11-10-2018 TF3313_0969 5fae371878b72a7b0b672faccd5736ef 938 Gene3D G3DSA:3.40.50.300 605 932 1.9E-129 T 11-10-2018 TF3313_0969 5fae371878b72a7b0b672faccd5736ef 938 Pfam PF00005 ABC transporter 615 856 2.8E-8 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TF3313_0969 5fae371878b72a7b0b672faccd5736ef 938 SUPERFAMILY SSF52540 606 909 2.2E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0969 5fae371878b72a7b0b672faccd5736ef 938 Gene3D G3DSA:3.30.190.20 142 254 8.4E-217 T 11-10-2018 TF3313_0969 5fae371878b72a7b0b672faccd5736ef 938 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 16 921 0.0 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 TF3313_0875 0332cee6672b77118a6e36a4939b068c 530 SUPERFAMILY SSF53795 220 528 4.94E-124 T 11-10-2018 TF3313_0875 0332cee6672b77118a6e36a4939b068c 530 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 256 271 - T 11-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 TF3313_0875 0332cee6672b77118a6e36a4939b068c 530 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 10 529 51.412 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 TF3313_0875 0332cee6672b77118a6e36a4939b068c 530 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 5 529 4.2E-245 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 TF3313_0875 0332cee6672b77118a6e36a4939b068c 530 Gene3D G3DSA:3.90.228.20 226 513 9.6E-218 T 11-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 TF3313_0875 0332cee6672b77118a6e36a4939b068c 530 Gene3D G3DSA:2.170.8.10 41 340 9.6E-218 T 11-10-2018 TF3313_0875 0332cee6672b77118a6e36a4939b068c 530 Pfam PF01293 Phosphoenolpyruvate carboxykinase 16 480 1.1E-202 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 TF3313_0875 0332cee6672b77118a6e36a4939b068c 530 Gene3D G3DSA:3.40.449.10 17 225 9.6E-218 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 TF3313_0875 0332cee6672b77118a6e36a4939b068c 530 SUPERFAMILY SSF68923 2 218 8.89E-78 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 TF3313_0875 0332cee6672b77118a6e36a4939b068c 530 PIRSF PIRSF006294 2 529 8.9E-216 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 TF3313_1716 b12c9d00edcaa06311892f638a10bd79 225 Gene3D G3DSA:3.40.1280.10 1 173 5.4E-66 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TF3313_1716 b12c9d00edcaa06311892f638a10bd79 225 Gene3D G3DSA:1.10.1270.20 174 225 2.7E-23 T 11-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TF3313_1716 b12c9d00edcaa06311892f638a10bd79 225 SUPERFAMILY SSF75217 2 224 3.6E-90 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases TF3313_1716 b12c9d00edcaa06311892f638a10bd79 225 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 2 225 2.0E-84 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TF3313_1716 b12c9d00edcaa06311892f638a10bd79 225 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 24 221 9.1E-58 T 11-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TF3313_1716 b12c9d00edcaa06311892f638a10bd79 225 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 225 95.54 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TF3313_1716 b12c9d00edcaa06311892f638a10bd79 225 PIRSF PIRSF000386 2 225 7.5E-95 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TF3313_0234 3ba09387554a1f71489ad1a722192719 358 Pfam PF06250 Protein of unknown function (DUF1016) 18 337 3.0E-112 T 11-10-2018 IPR009362 Protein of unknown function DUF1016 TF3313_1445 263416c42bf6f6fae6537e735defb32c 402 Gene3D G3DSA:3.80.30.20 16 324 9.0E-97 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TF3313_1445 263416c42bf6f6fae6537e735defb32c 402 Pfam PF04055 Radical SAM superfamily 34 199 4.1E-21 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TF3313_1445 263416c42bf6f6fae6537e735defb32c 402 SMART SM00729 29 248 1.1E-49 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TF3313_1445 263416c42bf6f6fae6537e735defb32c 402 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 32 369 2.0E-81 T 11-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 TF3313_1445 263416c42bf6f6fae6537e735defb32c 402 SUPERFAMILY SSF102114 28 401 4.45E-103 T 11-10-2018 TF3313_0863 bba23cbd651ae3cfc62540cc5338f392 377 SUPERFAMILY SSF53383 13 373 1.07E-101 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TF3313_0863 bba23cbd651ae3cfc62540cc5338f392 377 Gene3D G3DSA:3.90.1150.10 251 376 2.7E-34 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TF3313_0863 bba23cbd651ae3cfc62540cc5338f392 377 Gene3D G3DSA:3.40.640.10 1 249 2.9E-85 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TF3313_0863 bba23cbd651ae3cfc62540cc5338f392 377 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 15 370 2.0E-111 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase TF3313_0863 bba23cbd651ae3cfc62540cc5338f392 377 PIRSF PIRSF000390 2 377 9.8E-98 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase TF3313_1923 31d520ac27746d3a46ed2e8349355cb4 291 Pfam PF00005 ABC transporter 21 156 6.4E-20 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TF3313_1923 31d520ac27746d3a46ed2e8349355cb4 291 SMART SM00382 29 210 1.8E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_1923 31d520ac27746d3a46ed2e8349355cb4 291 SUPERFAMILY SSF52540 2 229 2.36E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1923 31d520ac27746d3a46ed2e8349355cb4 291 Gene3D G3DSA:3.40.50.300 1 229 5.3E-41 T 11-10-2018 TF3313_0647 85db73c1e0b7581ba9d549e0f7daeece 523 PIRSF PIRSF500217 36 523 4.1E-146 T 11-10-2018 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 TF3313_0647 85db73c1e0b7581ba9d549e0f7daeece 523 PIRSF PIRSF016636 36 523 3.0E-146 T 11-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB TF3313_0647 85db73c1e0b7581ba9d549e0f7daeece 523 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 196 402 1.1E-29 T 11-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT TF3313_1951 32d59bd4e611fe4eb7973975acc08a61 176 Pfam PF13302 Acetyltransferase (GNAT) domain 9 148 4.7E-21 T 11-10-2018 IPR000182 GNAT domain TF3313_1951 32d59bd4e611fe4eb7973975acc08a61 176 SUPERFAMILY SSF55729 2 172 4.63E-41 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TF3313_1951 32d59bd4e611fe4eb7973975acc08a61 176 Gene3D G3DSA:3.40.630.30 1 176 1.7E-36 T 11-10-2018 TF3313_2297 e4bae2fd54036c9f230a3a49d4b3abba 296 SUPERFAMILY SSF51658 48 294 4.42E-63 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily TF3313_2297 e4bae2fd54036c9f230a3a49d4b3abba 296 Gene3D G3DSA:3.20.20.150 49 290 1.8E-50 T 11-10-2018 TF3313_2297 e4bae2fd54036c9f230a3a49d4b3abba 296 Pfam PF01261 Xylose isomerase-like TIM barrel 69 240 9.8E-23 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain TF3313_2039 5c97fd6731492fa26841e01c21eb32c6 203 Pfam PF06250 Protein of unknown function (DUF1016) 2 185 5.0E-67 T 11-10-2018 IPR009362 Protein of unknown function DUF1016 TF3313_2039 5c97fd6731492fa26841e01c21eb32c6 203 Gene3D G3DSA:3.40.1350.10 50 162 3.0E-6 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 TF3313_1534 5914af3414fdc3b6a9d6d828ad243e84 356 SMART SM00830 273 353 4.0E-23 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 TF3313_1534 5914af3414fdc3b6a9d6d828ad243e84 356 SUPERFAMILY SSF51569 15 259 7.33E-62 T 11-10-2018 TF3313_1534 5914af3414fdc3b6a9d6d828ad243e84 356 Pfam PF00793 DAHP synthetase I family 15 253 1.0E-34 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 TF3313_1534 5914af3414fdc3b6a9d6d828ad243e84 356 SUPERFAMILY SSF48600 263 351 9.62E-22 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 TF3313_1534 5914af3414fdc3b6a9d6d828ad243e84 356 Pfam PF01817 Chorismate mutase type II 273 350 1.7E-20 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 TF3313_1534 5914af3414fdc3b6a9d6d828ad243e84 356 Gene3D G3DSA:1.20.59.10 261 356 9.6E-24 T 11-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 TF3313_1534 5914af3414fdc3b6a9d6d828ad243e84 356 Gene3D G3DSA:3.20.20.70 8 260 3.1E-81 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_2152 c5b75bf3c76cbbb346d09f67b4879094 141 Pfam PF07030 Protein of unknown function (DUF1320) 13 130 6.1E-8 T 11-10-2018 IPR009752 Bacteriophage Mu, Gp36 TF3313_0437 035df33f4d597a356c47381d498f4641 385 SUPERFAMILY SSF53756 21 379 6.02E-75 T 11-10-2018 TF3313_0437 035df33f4d597a356c47381d498f4641 385 Gene3D G3DSA:3.40.50.2000 93 376 2.0E-57 T 11-10-2018 TF3313_0437 035df33f4d597a356c47381d498f4641 385 Gene3D G3DSA:3.40.50.2000 183 360 2.0E-57 T 11-10-2018 TF3313_0437 035df33f4d597a356c47381d498f4641 385 Pfam PF00534 Glycosyl transferases group 1 206 356 8.5E-31 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 TF3313_0437 035df33f4d597a356c47381d498f4641 385 Pfam PF13439 Glycosyltransferase Family 4 43 182 1.3E-17 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 TF3313_0242 3e256156fd61b3e07715c4c5581af56e 370 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 30 367 2.1E-117 T 11-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 TF3313_0242 3e256156fd61b3e07715c4c5581af56e 370 Gene3D G3DSA:3.40.50.720 31 308 1.5E-130 T 11-10-2018 TF3313_0242 3e256156fd61b3e07715c4c5581af56e 370 Gene3D G3DSA:3.90.25.10 225 363 1.5E-130 T 11-10-2018 TF3313_0242 3e256156fd61b3e07715c4c5581af56e 370 Pfam PF16363 GDP-mannose 4,6 dehydratase 32 357 1.3E-48 T 11-10-2018 IPR016040 NAD(P)-binding domain TF3313_0242 3e256156fd61b3e07715c4c5581af56e 370 SUPERFAMILY SSF51735 27 366 1.09E-83 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_1315 c445390ff80bd156b15faea284e45bbc 544 Gene3D G3DSA:3.30.260.10 135 410 3.0E-234 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily TF3313_1315 c445390ff80bd156b15faea284e45bbc 544 Hamap MF_00600 60 kDa chaperonin [groL]. 1 543 41.345 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TF3313_1315 c445390ff80bd156b15faea284e45bbc 544 SUPERFAMILY SSF52029 184 376 1.92E-86 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily TF3313_1315 c445390ff80bd156b15faea284e45bbc 544 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 525 8.7E-101 T 11-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 TF3313_1315 c445390ff80bd156b15faea284e45bbc 544 Gene3D G3DSA:3.50.7.10 192 372 3.0E-234 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily TF3313_1315 c445390ff80bd156b15faea284e45bbc 544 PRINTS PR00298 60kDa chaperonin signature 350 375 4.1E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TF3313_1315 c445390ff80bd156b15faea284e45bbc 544 PRINTS PR00298 60kDa chaperonin signature 268 291 4.1E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TF3313_1315 c445390ff80bd156b15faea284e45bbc 544 PRINTS PR00298 60kDa chaperonin signature 26 52 4.1E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TF3313_1315 c445390ff80bd156b15faea284e45bbc 544 PRINTS PR00298 60kDa chaperonin signature 398 419 4.1E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TF3313_1315 c445390ff80bd156b15faea284e45bbc 544 PRINTS PR00298 60kDa chaperonin signature 82 109 4.1E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TF3313_1315 c445390ff80bd156b15faea284e45bbc 544 Gene3D G3DSA:1.10.560.10 7 521 3.0E-234 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily TF3313_1315 c445390ff80bd156b15faea284e45bbc 544 SUPERFAMILY SSF54849 142 198 9.16E-17 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily TF3313_1315 c445390ff80bd156b15faea284e45bbc 544 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 11-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TF3313_1315 c445390ff80bd156b15faea284e45bbc 544 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 527 5.7E-261 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TF3313_1315 c445390ff80bd156b15faea284e45bbc 544 SUPERFAMILY SSF48592 6 521 9.99E-75 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily TF3313_2540 228831e33e14447eb051ec6fa4599bae 192 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 11 187 8.4E-42 T 11-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 TF3313_2540 228831e33e14447eb051ec6fa4599bae 192 Gene3D G3DSA:3.40.920.10 1 192 3.3E-50 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 TF3313_2540 228831e33e14447eb051ec6fa4599bae 192 SUPERFAMILY SSF53323 2 191 9.68E-47 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 TF3313_1730 dd320e63573a459acbcca561b86283f5 375 Pfam PF00149 Calcineurin-like phosphoesterase 155 316 6.5E-11 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TF3313_1730 dd320e63573a459acbcca561b86283f5 375 SUPERFAMILY SSF56300 156 368 1.27E-30 T 11-10-2018 TF3313_1730 dd320e63573a459acbcca561b86283f5 375 Gene3D G3DSA:3.60.21.10 153 348 2.4E-20 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like TF3313_2006 0438ba41ecc4105ac28199ce4009bcb5 304 SUPERFAMILY SSF56925 83 176 8.63E-8 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel TF3313_2386 0438ba41ecc4105ac28199ce4009bcb5 304 SUPERFAMILY SSF56925 83 176 8.63E-8 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel TF3313_2607 ec332ace4e45c5eb73575b26ce1d0c88 486 Gene3D G3DSA:2.60.40.1180 49 482 1.2E-129 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta TF3313_2607 ec332ace4e45c5eb73575b26ce1d0c88 486 Pfam PF17189 Glycosyl hydrolase family 30 beta sandwich domain 419 480 4.1E-13 T 11-10-2018 IPR033452 Glycosyl hydrolase family 30, beta sandwich domain Reactome: R-HSA-1660662|Reactome: R-HSA-390471 TF3313_2607 ec332ace4e45c5eb73575b26ce1d0c88 486 Pfam PF02055 Glycosyl hydrolase family 30 TIM-barrel domain 73 412 2.8E-42 T 11-10-2018 IPR033453 Glycosyl hydrolase family 30, TIM-barrel domain Reactome: R-HSA-1660662|Reactome: R-HSA-390471 TF3313_2607 ec332ace4e45c5eb73575b26ce1d0c88 486 PRINTS PR00843 Glycosyl hydrolase family 30 signature 62 82 1.6E-10 T 11-10-2018 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 Reactome: R-HSA-1660662|Reactome: R-HSA-390471 TF3313_2607 ec332ace4e45c5eb73575b26ce1d0c88 486 PRINTS PR00843 Glycosyl hydrolase family 30 signature 196 213 1.6E-10 T 11-10-2018 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 Reactome: R-HSA-1660662|Reactome: R-HSA-390471 TF3313_2607 ec332ace4e45c5eb73575b26ce1d0c88 486 PRINTS PR00843 Glycosyl hydrolase family 30 signature 97 123 1.6E-10 T 11-10-2018 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 Reactome: R-HSA-1660662|Reactome: R-HSA-390471 TF3313_2607 ec332ace4e45c5eb73575b26ce1d0c88 486 Gene3D G3DSA:3.20.20.80 70 420 1.2E-129 T 11-10-2018 TF3313_2607 ec332ace4e45c5eb73575b26ce1d0c88 486 SUPERFAMILY SSF51445 72 420 1.49E-75 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily TF3313_2100 bbb47061aebcaee4a7ace82d9404af23 112 SUPERFAMILY SSF47413 3 63 2.66E-6 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TF3313_2452 258c6b9991beb6c4238deaa15ef79341 236 Gene3D G3DSA:1.10.10.10 159 236 1.9E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_2452 258c6b9991beb6c4238deaa15ef79341 236 SUPERFAMILY SSF46785 166 233 3.81E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TF3313_2452 258c6b9991beb6c4238deaa15ef79341 236 Pfam PF00293 NUDIX domain 6 137 1.0E-8 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 TF3313_2452 258c6b9991beb6c4238deaa15ef79341 236 SUPERFAMILY SSF55811 7 159 5.88E-19 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TF3313_2452 258c6b9991beb6c4238deaa15ef79341 236 Gene3D G3DSA:3.90.79.10 3 152 7.2E-31 T 11-10-2018 TF3313_2922 58c1d2360680bbc442620e74663e6f76 137 TIGRFAM TIGR00105 L31: ribosomal protein bL31 54 133 2.1E-20 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_2922 58c1d2360680bbc442620e74663e6f76 137 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 54 134 23.831 T 11-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_2922 58c1d2360680bbc442620e74663e6f76 137 ProSitePatterns PS01143 Ribosomal protein L31 signature. 102 123 - T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_2922 58c1d2360680bbc442620e74663e6f76 137 Gene3D G3DSA:2.30.170.50 54 137 1.4E-23 T 11-10-2018 TF3313_2922 58c1d2360680bbc442620e74663e6f76 137 Pfam PF01197 Ribosomal protein L31 54 132 7.4E-28 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_2922 58c1d2360680bbc442620e74663e6f76 137 PRINTS PR01249 Ribosomal protein L31 signature 55 72 2.8E-14 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_2922 58c1d2360680bbc442620e74663e6f76 137 PRINTS PR01249 Ribosomal protein L31 signature 98 113 2.8E-14 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_2922 58c1d2360680bbc442620e74663e6f76 137 PRINTS PR01249 Ribosomal protein L31 signature 113 131 2.8E-14 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_2922 58c1d2360680bbc442620e74663e6f76 137 SUPERFAMILY SSF143800 54 133 4.32E-20 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2871 e4cc0b75194fceacb576206f5f892573 141 Pfam PF11888 Protein of unknown function (DUF3408) 9 136 1.3E-34 T 11-10-2018 IPR021823 Protein of unknown function DUF3408 TF3313_2138 2db5466fdc8573441fbfa0f2222b5c5c 156 TIGRFAM TIGR01870 cas_TM1810_Csm2: CRISPR type III-A/MTUBE-associated protein Csm2 77 153 2.2E-12 T 11-10-2018 IPR010149 CRISPR-associated protein, Csm2 Type III-A TF3313_2138 2db5466fdc8573441fbfa0f2222b5c5c 156 Pfam PF03750 Csm2 Type III-A 59 154 7.5E-14 T 11-10-2018 IPR010149 CRISPR-associated protein, Csm2 Type III-A TF3313_2016 2e917ba1c85c41c000a026ada1806889 532 Pfam PF14322 Starch-binding associating with outer membrane 86 239 1.1E-19 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_2016 2e917ba1c85c41c000a026ada1806889 532 Pfam PF07980 SusD family 371 531 2.5E-28 T 11-10-2018 IPR012944 RagB/SusD domain TF3313_2016 2e917ba1c85c41c000a026ada1806889 532 SUPERFAMILY SSF48452 30 531 1.64E-90 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2016 2e917ba1c85c41c000a026ada1806889 532 Gene3D G3DSA:1.25.40.390 47 532 6.3E-124 T 11-10-2018 TF3313_1305 85db064870a85ebffeea619d34af5335 734 SMART SM00382 519 705 2.7E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_1305 85db064870a85ebffeea619d34af5335 734 ProSitePatterns PS00211 ABC transporters family signature. 631 645 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TF3313_1305 85db064870a85ebffeea619d34af5335 734 SUPERFAMILY SSF52540 486 729 2.61E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1305 85db064870a85ebffeea619d34af5335 734 Gene3D G3DSA:1.20.1560.10 160 475 5.3E-59 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TF3313_1305 85db064870a85ebffeea619d34af5335 734 Pfam PF00005 ABC transporter 510 659 6.6E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TF3313_1305 85db064870a85ebffeea619d34af5335 734 Gene3D G3DSA:3.90.70.10 1 153 3.4E-45 T 11-10-2018 TF3313_1305 85db064870a85ebffeea619d34af5335 734 SUPERFAMILY SSF90123 162 470 1.22E-56 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TF3313_1305 85db064870a85ebffeea619d34af5335 734 Pfam PF03412 Peptidase C39 family 2 125 1.3E-32 T 11-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 TF3313_1305 85db064870a85ebffeea619d34af5335 734 Gene3D G3DSA:3.40.50.300 483 732 1.7E-83 T 11-10-2018 TF3313_1305 85db064870a85ebffeea619d34af5335 734 Pfam PF00664 ABC transporter transmembrane region 179 445 4.5E-25 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TF3313_1465 88d59c45372844e690d658868e4acb6f 481 Pfam PF03577 Peptidase family C69 17 408 9.7E-123 T 11-10-2018 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 TF3313_1465 88d59c45372844e690d658868e4acb6f 481 Gene3D G3DSA:3.60.60.10 17 230 2.4E-12 T 11-10-2018 TF3313_0377 9e58211f550d9db5aa3c5736779687b5 314 PIRSF PIRSF006483 4 294 2.6E-89 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT TF3313_0377 9e58211f550d9db5aa3c5736779687b5 314 Gene3D G3DSA:3.30.70.120 204 278 7.6E-19 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal TF3313_0377 9e58211f550d9db5aa3c5736779687b5 314 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 232 286 1.9E-16 T 11-10-2018 IPR019264 Domain of unknown function DUF2179 TF3313_0377 9e58211f550d9db5aa3c5736779687b5 314 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 19 227 8.2E-65 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT TF3313_1804 4c1242af95c3500c71f4211e0ededfe3 473 Gene3D G3DSA:1.20.1260.30 1 126 6.2E-41 T 11-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily TF3313_1804 4c1242af95c3500c71f4211e0ededfe3 473 Gene3D G3DSA:3.40.50.150 127 446 1.4E-101 T 11-10-2018 TF3313_1804 4c1242af95c3500c71f4211e0ededfe3 473 Pfam PF12161 HsdM N-terminal domain 11 117 2.6E-15 T 11-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain TF3313_1804 4c1242af95c3500c71f4211e0ededfe3 473 SUPERFAMILY SSF53335 10 471 1.17E-121 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_1804 4c1242af95c3500c71f4211e0ededfe3 473 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 256 262 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TF3313_1804 4c1242af95c3500c71f4211e0ededfe3 473 Pfam PF02384 N-6 DNA Methylase 127 402 1.9E-70 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 TF3313_1804 4c1242af95c3500c71f4211e0ededfe3 473 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 174 188 9.9E-23 T 11-10-2018 TF3313_1804 4c1242af95c3500c71f4211e0ededfe3 473 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 283 307 9.9E-23 T 11-10-2018 TF3313_1804 4c1242af95c3500c71f4211e0ededfe3 473 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 150 166 9.9E-23 T 11-10-2018 TF3313_1804 4c1242af95c3500c71f4211e0ededfe3 473 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 253 265 9.9E-23 T 11-10-2018 TF3313_0311 cd5e26aad8537f882e75653e3dfdd83a 346 Pfam PF15869 TolB-like 6-blade propeller-like 39 315 9.1E-25 T 11-10-2018 TF3313_0311 cd5e26aad8537f882e75653e3dfdd83a 346 SUPERFAMILY SSF101898 105 338 2.48E-6 T 11-10-2018 TF3313_1871 a817c6a9daf919d51b975442544642ab 202 Pfam PF14123 Domain of unknown function (DUF4290) 1 173 3.1E-77 T 11-10-2018 IPR025632 Protein of unknown function DUF4290 TF3313_2737 f4444c914e33face6a9a2b665d6428fb 155 SUPERFAMILY SSF81665 70 132 3.66E-5 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 TF3313_0472 dbe75e27c7ebae74b3739a96c04f5cb4 330 SUPERFAMILY SSF52374 3 326 2.48E-78 T 11-10-2018 TF3313_0472 dbe75e27c7ebae74b3739a96c04f5cb4 330 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 327 34.965 T 11-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 TF3313_0472 dbe75e27c7ebae74b3739a96c04f5cb4 330 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 326 3.5E-89 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 TF3313_0472 dbe75e27c7ebae74b3739a96c04f5cb4 330 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 19 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_0472 dbe75e27c7ebae74b3739a96c04f5cb4 330 Gene3D G3DSA:3.40.50.620 4 321 2.1E-113 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_0472 dbe75e27c7ebae74b3739a96c04f5cb4 330 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 14 30 1.2E-24 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 TF3313_0472 dbe75e27c7ebae74b3739a96c04f5cb4 330 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 64 83 1.2E-24 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 TF3313_0472 dbe75e27c7ebae74b3739a96c04f5cb4 330 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 194 204 1.2E-24 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 TF3313_0472 dbe75e27c7ebae74b3739a96c04f5cb4 330 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 140 161 1.2E-24 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 TF3313_0472 dbe75e27c7ebae74b3739a96c04f5cb4 330 Gene3D G3DSA:1.10.240.10 181 294 2.1E-113 T 11-10-2018 TF3313_0472 dbe75e27c7ebae74b3739a96c04f5cb4 330 Pfam PF00579 tRNA synthetases class I (W and Y) 3 280 3.0E-69 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_2773 538c741d2fcd823d8d37bf7cc51212bf 820 Pfam PF00270 DEAD/DEAH box helicase 287 446 8.5E-8 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TF3313_2773 538c741d2fcd823d8d37bf7cc51212bf 820 SUPERFAMILY SSF52540 298 692 1.0E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2773 538c741d2fcd823d8d37bf7cc51212bf 820 TIGRFAM TIGR00595 priA: primosomal protein N' 305 819 2.1E-164 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 TF3313_2773 538c741d2fcd823d8d37bf7cc51212bf 820 SMART SM00490 583 680 7.3E-7 T 11-10-2018 IPR001650 Helicase, C-terminal TF3313_2773 538c741d2fcd823d8d37bf7cc51212bf 820 Gene3D G3DSA:3.40.50.300 274 465 2.2E-60 T 11-10-2018 TF3313_2773 538c741d2fcd823d8d37bf7cc51212bf 820 Gene3D G3DSA:1.10.8.630 3 113 1.3E-28 T 11-10-2018 TF3313_2773 538c741d2fcd823d8d37bf7cc51212bf 820 SMART SM00487 279 475 3.5E-17 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TF3313_2773 538c741d2fcd823d8d37bf7cc51212bf 820 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 820 22.497 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 TF3313_2773 538c741d2fcd823d8d37bf7cc51212bf 820 Pfam PF00271 Helicase conserved C-terminal domain 607 678 1.3E-7 T 11-10-2018 IPR001650 Helicase, C-terminal TF3313_0399 69ea2dbbbb876234cd8cf320f119b417 425 Pfam PF12704 MacB-like periplasmic core domain 21 231 8.1E-21 T 11-10-2018 IPR025857 MacB-like periplasmic core domain TF3313_0399 69ea2dbbbb876234cd8cf320f119b417 425 Pfam PF02687 FtsX-like permease family 311 416 4.7E-10 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TF3313_1182 03145e320ea0a278b5cb1de8cc978140 85 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 40 82 0.009 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 TF3313_1182 03145e320ea0a278b5cb1de8cc978140 85 SUPERFAMILY SSF47336 8 83 9.03E-14 T 11-10-2018 IPR036736 ACP-like superfamily TF3313_1182 03145e320ea0a278b5cb1de8cc978140 85 Gene3D G3DSA:1.10.1200.10 5 85 3.3E-19 T 11-10-2018 IPR036736 ACP-like superfamily TF3313_1182 03145e320ea0a278b5cb1de8cc978140 85 Pfam PF00550 Phosphopantetheine attachment site 9 79 2.3E-10 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain TF3313_0697 7ee821d32f66120fc9f3c6632f1a07f9 1161 Gene3D G3DSA:1.25.10.10 100 267 2.9E-10 T 11-10-2018 IPR011989 Armadillo-like helical TF3313_0697 7ee821d32f66120fc9f3c6632f1a07f9 1161 Gene3D G3DSA:2.60.120.560 737 956 2.5E-55 T 11-10-2018 TF3313_0697 7ee821d32f66120fc9f3c6632f1a07f9 1161 Gene3D G3DSA:2.60.120.560 957 1161 8.6E-61 T 11-10-2018 TF3313_0697 7ee821d32f66120fc9f3c6632f1a07f9 1161 Pfam PF06439 Domain of Unknown Function (DUF1080) 971 1158 8.0E-41 T 11-10-2018 IPR010496 Domain of unknown function DUF1080 TF3313_0697 7ee821d32f66120fc9f3c6632f1a07f9 1161 Pfam PF06439 Domain of Unknown Function (DUF1080) 755 953 1.2E-41 T 11-10-2018 IPR010496 Domain of unknown function DUF1080 TF3313_0697 7ee821d32f66120fc9f3c6632f1a07f9 1161 Gene3D G3DSA:1.25.10.10 278 646 7.1E-12 T 11-10-2018 IPR011989 Armadillo-like helical TF3313_0697 7ee821d32f66120fc9f3c6632f1a07f9 1161 SUPERFAMILY SSF48371 111 735 1.12E-19 T 11-10-2018 IPR016024 Armadillo-type fold TF3313_0697 7ee821d32f66120fc9f3c6632f1a07f9 1161 SMART SM00567 E-Z type HEAT repeats 121 150 250.0 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 TF3313_0697 7ee821d32f66120fc9f3c6632f1a07f9 1161 SMART SM00567 E-Z type HEAT repeats 401 430 3.7 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 TF3313_0697 7ee821d32f66120fc9f3c6632f1a07f9 1161 SMART SM00567 E-Z type HEAT repeats 156 179 160.0 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 TF3313_0662 f42b44b85387ef16cb13affeed000278 71 SMART SM00530 7 62 3.8E-12 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TF3313_0662 f42b44b85387ef16cb13affeed000278 71 SUPERFAMILY SSF47413 5 65 5.63E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TF3313_0662 f42b44b85387ef16cb13affeed000278 71 Pfam PF01381 Helix-turn-helix 8 62 6.9E-12 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TF3313_0662 f42b44b85387ef16cb13affeed000278 71 Gene3D G3DSA:1.10.260.40 1 68 3.2E-30 T 11-10-2018 TF3313_2827 e95631386b10186e6f32ff07dd4b7b88 153 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 22 55 8.4E-8 T 11-10-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 TF3313_1299 826bee0dd9079df2e41dbe106059ad90 270 ProSitePatterns PS00639 Eukaryotic thiol (cysteine) proteases histidine active site. 215 225 - T 11-10-2018 IPR025660 Cysteine peptidase, histidine active site Reactome: R-HSA-2132295 TF3313_1299 826bee0dd9079df2e41dbe106059ad90 270 Pfam PF00112 Papain family cysteine protease 44 252 7.3E-19 T 11-10-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 TF3313_1299 826bee0dd9079df2e41dbe106059ad90 270 Gene3D G3DSA:3.90.70.10 12 270 4.9E-93 T 11-10-2018 TF3313_1299 826bee0dd9079df2e41dbe106059ad90 270 SMART SM00645 44 263 9.2E-6 T 11-10-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 TF3313_1299 826bee0dd9079df2e41dbe106059ad90 270 SUPERFAMILY SSF54001 33 253 9.56E-43 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TF3313_1895 729a1e8b39ae7741cdbf8bc82bbef589 258 Gene3D G3DSA:3.40.1190.20 1 258 2.9E-26 T 11-10-2018 IPR029056 Ribokinase-like TF3313_1895 729a1e8b39ae7741cdbf8bc82bbef589 258 SUPERFAMILY SSF53613 3 255 7.37E-23 T 11-10-2018 IPR029056 Ribokinase-like TF3313_1895 729a1e8b39ae7741cdbf8bc82bbef589 258 Pfam PF00294 pfkB family carbohydrate kinase 4 255 1.2E-16 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB TF3313_1895 729a1e8b39ae7741cdbf8bc82bbef589 258 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 199 212 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 TF3313_0794 7352b5e96b82a58c600e634167013ca2 526 Gene3D G3DSA:3.20.20.70 13 331 7.1E-104 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_0794 7352b5e96b82a58c600e634167013ca2 526 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 21 37 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TF3313_0794 7352b5e96b82a58c600e634167013ca2 526 Pfam PF00682 HMGL-like 13 281 1.5E-51 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 TF3313_0794 7352b5e96b82a58c600e634167013ca2 526 Gene3D G3DSA:3.30.160.340 455 517 7.4E-25 T 11-10-2018 TF3313_0794 7352b5e96b82a58c600e634167013ca2 526 SUPERFAMILY SSF110921 400 511 4.97E-14 T 11-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TF3313_0794 7352b5e96b82a58c600e634167013ca2 526 SMART SM00917 354 513 1.2E-9 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TF3313_0794 7352b5e96b82a58c600e634167013ca2 526 SUPERFAMILY SSF51569 10 299 8.42E-66 T 11-10-2018 TF3313_0794 7352b5e96b82a58c600e634167013ca2 526 Pfam PF08502 LeuA allosteric (dimerisation) domain 377 512 8.2E-23 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TF3313_0794 7352b5e96b82a58c600e634167013ca2 526 Gene3D G3DSA:3.30.160.740 397 452 2.9E-13 T 11-10-2018 TF3313_1176 99d513b8b4c9a32199cc0cf8d2433713 81 SUPERFAMILY SSF47336 1 79 3.53E-18 T 11-10-2018 IPR036736 ACP-like superfamily TF3313_1176 99d513b8b4c9a32199cc0cf8d2433713 81 Pfam PF00550 Phosphopantetheine attachment site 13 75 1.8E-10 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain TF3313_1176 99d513b8b4c9a32199cc0cf8d2433713 81 ProSitePatterns PS00012 Phosphopantetheine attachment site. 34 49 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site TF3313_1176 99d513b8b4c9a32199cc0cf8d2433713 81 Hamap MF_01217 Acyl carrier protein [acpP]. 5 79 15.149 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 TF3313_1176 99d513b8b4c9a32199cc0cf8d2433713 81 Gene3D G3DSA:1.10.1200.10 1 79 5.6E-21 T 11-10-2018 IPR036736 ACP-like superfamily TF3313_1921 d18ec77f1fa9036fe6be528c183f70e5 165 Gene3D G3DSA:3.90.1180.10 20 161 1.9E-60 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 TF3313_1921 d18ec77f1fa9036fe6be528c183f70e5 165 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 23 160 7.9E-57 T 11-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1921 d18ec77f1fa9036fe6be528c183f70e5 165 PIRSF PIRSF002181 18 164 5.5E-51 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 TF3313_1921 d18ec77f1fa9036fe6be528c183f70e5 165 Pfam PF00572 Ribosomal protein L13 33 157 9.6E-56 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 TF3313_1921 d18ec77f1fa9036fe6be528c183f70e5 165 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 34 160 28.444 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 TF3313_1921 d18ec77f1fa9036fe6be528c183f70e5 165 SUPERFAMILY SSF52161 24 162 2.22E-55 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 TF3313_0045 b5683f94fb8fab08018eb76eb9978be5 277 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 1 276 33.587 T 11-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 TF3313_0045 b5683f94fb8fab08018eb76eb9978be5 277 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 183 200 - T 11-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 TF3313_0045 b5683f94fb8fab08018eb76eb9978be5 277 Gene3D G3DSA:3.40.50.10490 5 245 8.9E-88 T 11-10-2018 TF3313_0045 b5683f94fb8fab08018eb76eb9978be5 277 SUPERFAMILY SSF53697 10 245 1.94E-68 T 11-10-2018 TF3313_0045 b5683f94fb8fab08018eb76eb9978be5 277 Pfam PF01380 SIS domain 124 206 1.5E-10 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 TF3313_0045 b5683f94fb8fab08018eb76eb9978be5 277 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 7 259 5.7E-94 T 11-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 TF3313_1765 1d5f5add7d49baa88a3db9a62a444acc 984 SUPERFAMILY SSF46689 931 981 1.52E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TF3313_1765 1d5f5add7d49baa88a3db9a62a444acc 984 SMART SM00388 474 540 2.8E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TF3313_1765 1d5f5add7d49baa88a3db9a62a444acc 984 Pfam PF13424 Tetratricopeptide repeat 294 356 6.0E-9 T 11-10-2018 TF3313_1765 1d5f5add7d49baa88a3db9a62a444acc 984 Gene3D G3DSA:3.40.50.2300 719 862 3.0E-36 T 11-10-2018 TF3313_1765 1d5f5add7d49baa88a3db9a62a444acc 984 SUPERFAMILY SSF48452 127 241 9.96E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1765 1d5f5add7d49baa88a3db9a62a444acc 984 SUPERFAMILY SSF55874 529 693 1.02E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TF3313_1765 1d5f5add7d49baa88a3db9a62a444acc 984 SUPERFAMILY SSF52172 730 857 5.27E-37 T 11-10-2018 IPR011006 CheY-like superfamily TF3313_1765 1d5f5add7d49baa88a3db9a62a444acc 984 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 932 975 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TF3313_1765 1d5f5add7d49baa88a3db9a62a444acc 984 Pfam PF12833 Helix-turn-helix domain 901 981 4.2E-25 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TF3313_1765 1d5f5add7d49baa88a3db9a62a444acc 984 SUPERFAMILY SSF48452 203 411 6.45E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1765 1d5f5add7d49baa88a3db9a62a444acc 984 SUPERFAMILY SSF47384 466 538 7.65E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TF3313_1765 1d5f5add7d49baa88a3db9a62a444acc 984 Gene3D G3DSA:1.10.287.130 463 541 6.0E-17 T 11-10-2018 TF3313_1765 1d5f5add7d49baa88a3db9a62a444acc 984 SMART SM00387 585 695 1.2E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TF3313_1765 1d5f5add7d49baa88a3db9a62a444acc 984 Gene3D G3DSA:1.25.40.10 286 435 1.1E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1765 1d5f5add7d49baa88a3db9a62a444acc 984 SMART SM00448 732 844 2.1E-36 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TF3313_1765 1d5f5add7d49baa88a3db9a62a444acc 984 Gene3D G3DSA:1.10.10.60 886 983 5.8E-27 T 11-10-2018 TF3313_1765 1d5f5add7d49baa88a3db9a62a444acc 984 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 590 693 7.2E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TF3313_1765 1d5f5add7d49baa88a3db9a62a444acc 984 Pfam PF00072 Response regulator receiver domain 735 844 5.0E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TF3313_1765 1d5f5add7d49baa88a3db9a62a444acc 984 PRINTS PR00344 Bacterial sensor protein C-terminal signature 622 636 2.4E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_1765 1d5f5add7d49baa88a3db9a62a444acc 984 PRINTS PR00344 Bacterial sensor protein C-terminal signature 640 650 2.4E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_1765 1d5f5add7d49baa88a3db9a62a444acc 984 PRINTS PR00344 Bacterial sensor protein C-terminal signature 655 673 2.4E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_1765 1d5f5add7d49baa88a3db9a62a444acc 984 PRINTS PR00344 Bacterial sensor protein C-terminal signature 679 692 2.4E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_1765 1d5f5add7d49baa88a3db9a62a444acc 984 SMART SM00342 895 979 3.3E-29 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TF3313_1765 1d5f5add7d49baa88a3db9a62a444acc 984 Gene3D G3DSA:1.25.40.10 110 285 2.9E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1765 1d5f5add7d49baa88a3db9a62a444acc 984 SMART SM00028 128 161 62.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1765 1d5f5add7d49baa88a3db9a62a444acc 984 SMART SM00028 209 242 0.71 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1765 1d5f5add7d49baa88a3db9a62a444acc 984 SMART SM00028 289 322 35.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1765 1d5f5add7d49baa88a3db9a62a444acc 984 SMART SM00028 329 362 21.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1765 1d5f5add7d49baa88a3db9a62a444acc 984 SMART SM00028 169 202 62.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1765 1d5f5add7d49baa88a3db9a62a444acc 984 Pfam PF00512 His Kinase A (phospho-acceptor) domain 476 538 5.2E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TF3313_1765 1d5f5add7d49baa88a3db9a62a444acc 984 Gene3D G3DSA:3.30.565.10 547 698 5.7E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TF3313_2441 77e055476d4cd3043af8fdbad1a06a30 339 SUPERFAMILY SSF46689 284 331 1.52E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TF3313_2441 77e055476d4cd3043af8fdbad1a06a30 339 Gene3D G3DSA:1.10.10.60 225 332 2.3E-20 T 11-10-2018 TF3313_2441 77e055476d4cd3043af8fdbad1a06a30 339 Pfam PF12833 Helix-turn-helix domain 251 330 2.2E-16 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TF3313_2441 77e055476d4cd3043af8fdbad1a06a30 339 SMART SM00342 245 328 8.8E-17 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TF3313_1266 a8b763a0314a30d390a30d760145f7d4 515 SUPERFAMILY SSF51126 194 446 5.58E-5 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor TF3313_0801 5c5a5bc4e7717b75daf52ef9d4f6cded 1158 SUPERFAMILY SSF52058 82 349 1.93E-14 T 11-10-2018 TF3313_0801 5c5a5bc4e7717b75daf52ef9d4f6cded 1158 SUPERFAMILY SSF49373 880 950 3.88E-13 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments TF3313_0801 5c5a5bc4e7717b75daf52ef9d4f6cded 1158 Gene3D G3DSA:3.80.10.10 541 740 1.4E-21 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily TF3313_0801 5c5a5bc4e7717b75daf52ef9d4f6cded 1158 Gene3D G3DSA:3.80.10.10 217 394 3.6E-31 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily TF3313_0801 5c5a5bc4e7717b75daf52ef9d4f6cded 1158 Gene3D G3DSA:3.80.10.10 395 508 7.1E-21 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily TF3313_0801 5c5a5bc4e7717b75daf52ef9d4f6cded 1158 Gene3D G3DSA:3.80.10.10 26 203 3.2E-41 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily TF3313_0801 5c5a5bc4e7717b75daf52ef9d4f6cded 1158 Pfam PF02368 Bacterial Ig-like domain (group 2) 879 955 1.4E-21 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_0801 5c5a5bc4e7717b75daf52ef9d4f6cded 1158 Pfam PF13004 Putative binding domain, N-terminal 816 871 7.2E-11 T 11-10-2018 IPR024361 Bacteroidetes-Associated Carbohydrate-binding Often N-terminal MetaCyc: PWY-6807 TF3313_0801 5c5a5bc4e7717b75daf52ef9d4f6cded 1158 SMART SM00635 876 954 2.1E-19 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_0801 5c5a5bc4e7717b75daf52ef9d4f6cded 1158 Pfam PF13306 Leucine rich repeats (6 copies) 265 374 2.7E-19 T 11-10-2018 IPR026906 Leucine rich repeat 5 TF3313_0801 5c5a5bc4e7717b75daf52ef9d4f6cded 1158 Pfam PF13306 Leucine rich repeats (6 copies) 70 183 1.2E-27 T 11-10-2018 IPR026906 Leucine rich repeat 5 TF3313_0801 5c5a5bc4e7717b75daf52ef9d4f6cded 1158 Pfam PF13306 Leucine rich repeats (6 copies) 438 495 1.8E-11 T 11-10-2018 IPR026906 Leucine rich repeat 5 TF3313_0801 5c5a5bc4e7717b75daf52ef9d4f6cded 1158 Pfam PF13306 Leucine rich repeats (6 copies) 581 657 3.1E-10 T 11-10-2018 IPR026906 Leucine rich repeat 5 TF3313_0801 5c5a5bc4e7717b75daf52ef9d4f6cded 1158 Gene3D G3DSA:2.60.40.10 784 871 4.6E-18 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_0801 5c5a5bc4e7717b75daf52ef9d4f6cded 1158 Gene3D G3DSA:2.60.40.1080 878 958 4.3E-17 T 11-10-2018 TF3313_0138 0112c9c1cc09c75086a4bcaccb08353a 449 SUPERFAMILY SSF88713 13 358 6.49E-63 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 TF3313_0138 0112c9c1cc09c75086a4bcaccb08353a 449 Pfam PF03065 Glycosyl hydrolase family 57 17 329 5.3E-55 T 11-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 TF3313_0138 0112c9c1cc09c75086a4bcaccb08353a 449 Gene3D G3DSA:3.20.110.20 30 344 2.3E-26 T 11-10-2018 TF3313_0102 2de47b5ffe4eaf216a04e236d72d13a3 322 Gene3D G3DSA:3.60.120.10 35 321 5.1E-65 T 11-10-2018 IPR005801 ADC synthase GO:0009058 TF3313_0102 2de47b5ffe4eaf216a04e236d72d13a3 322 SUPERFAMILY SSF56322 55 318 1.16E-59 T 11-10-2018 IPR005801 ADC synthase GO:0009058 TF3313_0102 2de47b5ffe4eaf216a04e236d72d13a3 322 Pfam PF00425 chorismate binding enzyme 73 317 6.8E-55 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal TF3313_0102 2de47b5ffe4eaf216a04e236d72d13a3 322 PRINTS PR00095 Anthranilate synthase component I signature 162 175 1.1E-9 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TF3313_0102 2de47b5ffe4eaf216a04e236d72d13a3 322 PRINTS PR00095 Anthranilate synthase component I signature 274 288 1.1E-9 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TF3313_0102 2de47b5ffe4eaf216a04e236d72d13a3 322 PRINTS PR00095 Anthranilate synthase component I signature 260 274 1.1E-9 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TF3313_0102 2de47b5ffe4eaf216a04e236d72d13a3 322 PRINTS PR00095 Anthranilate synthase component I signature 176 189 1.1E-9 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TF3313_2674 71151721ef0f4523bfa2d4eaf5e7b9f4 418 Pfam PF13387 Domain of unknown function (DUF4105) 41 189 2.0E-24 T 11-10-2018 IPR025178 Domain of unknown function DUF4105 TF3313_0811 9dc5c8e5025380dc4ae69004b424e3ce 241 Pfam PF13568 Outer membrane protein beta-barrel domain 20 205 1.2E-16 T 11-10-2018 IPR025665 Outer membrane protein beta-barrel domain TF3313_1302 8d749da8b8d0f2df51acbda9fee0c1b7 763 SUPERFAMILY SSF49464 12 105 3.27E-10 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_1302 8d749da8b8d0f2df51acbda9fee0c1b7 763 Pfam PF13715 CarboxypepD_reg-like domain 12 94 5.3E-10 T 11-10-2018 TF3313_1302 8d749da8b8d0f2df51acbda9fee0c1b7 763 SUPERFAMILY SSF56935 101 743 1.32E-39 T 11-10-2018 TF3313_1302 8d749da8b8d0f2df51acbda9fee0c1b7 763 Gene3D G3DSA:2.40.170.20 199 743 4.2E-15 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_1302 8d749da8b8d0f2df51acbda9fee0c1b7 763 Pfam PF14905 Outer membrane protein beta-barrel family 363 741 5.3E-47 T 11-10-2018 TF3313_0857 033092a4dbe1944c0462deedea065a2f 145 Pfam PF14060 Domain of unknown function (DUF4252) 17 142 2.9E-21 T 11-10-2018 IPR025348 Protein of unknown function DUF4252 TF3313_1902 9b7736b78b749a8600e7db0f94a5edc8 122 SUPERFAMILY SSF160448 6 112 1.03E-42 T 11-10-2018 IPR036780 PG1857-like superfamily TF3313_1902 9b7736b78b749a8600e7db0f94a5edc8 122 Pfam PF09633 Protein of unknown function (DUF2023) 12 112 8.5E-43 T 11-10-2018 IPR018594 Domain of unknown function DUF2023 TF3313_1902 9b7736b78b749a8600e7db0f94a5edc8 122 Gene3D G3DSA:3.30.2190.10 1 116 1.5E-44 T 11-10-2018 IPR036780 PG1857-like superfamily TF3313_1321 8f69baa4c1eed4d159d26df5e9c67027 239 SUPERFAMILY SSF56925 29 218 4.71E-8 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel TF3313_2561 2414a2bf91635b1e1635dba351f1052b 326 Pfam PF04773 FecR protein 119 213 2.6E-18 T 11-10-2018 IPR006860 FecR protein TF3313_2561 2414a2bf91635b1e1635dba351f1052b 326 Gene3D G3DSA:3.55.50.30 252 326 1.4E-13 T 11-10-2018 TF3313_2561 2414a2bf91635b1e1635dba351f1052b 326 Gene3D G3DSA:2.60.120.1440 103 251 1.0E-39 T 11-10-2018 TF3313_2561 2414a2bf91635b1e1635dba351f1052b 326 PIRSF PIRSF018266 1 326 2.8E-64 T 11-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component TF3313_2561 2414a2bf91635b1e1635dba351f1052b 326 Pfam PF16344 Domain of unknown function (DUF4974) 224 323 3.2E-23 T 11-10-2018 IPR032508 Protein FecR, C-terminal TF3313_1851 b0695748c7e623dfa18809d5a31246ce 298 Pfam PF04773 FecR protein 94 185 2.2E-18 T 11-10-2018 IPR006860 FecR protein TF3313_1851 b0695748c7e623dfa18809d5a31246ce 298 Pfam PF16344 Domain of unknown function (DUF4974) 195 292 2.1E-16 T 11-10-2018 IPR032508 Protein FecR, C-terminal TF3313_1851 b0695748c7e623dfa18809d5a31246ce 298 Gene3D G3DSA:3.55.50.30 221 297 1.7E-11 T 11-10-2018 TF3313_1851 b0695748c7e623dfa18809d5a31246ce 298 PIRSF PIRSF018266 74 297 3.6E-56 T 11-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component TF3313_1851 b0695748c7e623dfa18809d5a31246ce 298 Gene3D G3DSA:2.60.120.1440 78 219 4.3E-44 T 11-10-2018 TF3313_0527 6bbfa75620bfd7fca286a51dc75ee835 3087 Gene3D G3DSA:2.60.40.1120 2026 2101 3.9E-5 T 11-10-2018 TF3313_0527 6bbfa75620bfd7fca286a51dc75ee835 3087 SUPERFAMILY SSF49464 2025 2068 7.46E-7 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_0527 6bbfa75620bfd7fca286a51dc75ee835 3087 Pfam PF13620 Carboxypeptidase regulatory-like domain 2025 2073 1.6E-7 T 11-10-2018 TF3313_0527 6bbfa75620bfd7fca286a51dc75ee835 3087 TIGRFAM TIGR02542 T_forsyth_147: TANFOR domain 32 182 3.3E-68 T 11-10-2018 TF3313_0527 6bbfa75620bfd7fca286a51dc75ee835 3087 TIGRFAM TIGR02542 T_forsyth_147: TANFOR domain 479 622 5.0E-79 T 11-10-2018 TF3313_0527 6bbfa75620bfd7fca286a51dc75ee835 3087 TIGRFAM TIGR02542 T_forsyth_147: TANFOR domain 332 476 2.3E-79 T 11-10-2018 TF3313_0527 6bbfa75620bfd7fca286a51dc75ee835 3087 TIGRFAM TIGR02542 T_forsyth_147: TANFOR domain 186 329 3.9E-80 T 11-10-2018 TF3313_0548 200c1498c5405bd80d11f8a262501da5 376 Gene3D G3DSA:3.40.50.2000 225 356 1.8E-6 T 11-10-2018 TF3313_0548 200c1498c5405bd80d11f8a262501da5 376 Pfam PF13528 Glycosyl transferase family 1 16 322 4.6E-30 T 11-10-2018 TF3313_0548 200c1498c5405bd80d11f8a262501da5 376 SUPERFAMILY SSF53756 16 338 2.42E-16 T 11-10-2018 TF3313_0427 ae53d7816f41c951342e43d76d8c7443 228 Pfam PF01863 Protein of unknown function DUF45 21 225 1.4E-56 T 11-10-2018 IPR002725 Protein of unknown function DUF45 TF3313_0427 ae53d7816f41c951342e43d76d8c7443 228 Gene3D G3DSA:3.30.2010.10 133 225 1.3E-14 T 11-10-2018 TF3313_1735 d2035ac0c773704f74908e5f762acd6d 403 Pfam PF13635 Domain of unknown function (DUF4143) 197 360 5.6E-14 T 11-10-2018 IPR025420 Domain of unknown function DUF4143 TF3313_1735 d2035ac0c773704f74908e5f762acd6d 403 Pfam PF13173 AAA domain 22 151 3.3E-20 T 11-10-2018 TF3313_1735 d2035ac0c773704f74908e5f762acd6d 403 SUPERFAMILY SSF52540 6 198 1.7E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0700 763c1635e8d7dbe124b2c02820276d08 543 SUPERFAMILY SSF48452 21 542 2.78E-109 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0700 763c1635e8d7dbe124b2c02820276d08 543 Pfam PF14322 Starch-binding associating with outer membrane 99 230 2.1E-19 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_0700 763c1635e8d7dbe124b2c02820276d08 543 Pfam PF07980 SusD family 270 542 1.4E-40 T 11-10-2018 IPR012944 RagB/SusD domain TF3313_0700 763c1635e8d7dbe124b2c02820276d08 543 Gene3D G3DSA:1.25.40.390 21 543 5.5E-152 T 11-10-2018 TF3313_1777 a93627514ef29832d9b52f51f880bec6 63 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 4 52 5.4E-17 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1777 a93627514ef29832d9b52f51f880bec6 63 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 18.903 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1777 a93627514ef29832d9b52f51f880bec6 63 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.2E-9 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1777 a93627514ef29832d9b52f51f880bec6 63 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.2E-9 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1777 a93627514ef29832d9b52f51f880bec6 63 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.2E-9 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1777 a93627514ef29832d9b52f51f880bec6 63 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.2E-9 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1777 a93627514ef29832d9b52f51f880bec6 63 Pfam PF01165 Ribosomal protein S21 4 55 1.1E-17 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1777 a93627514ef29832d9b52f51f880bec6 63 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 53 4.0E-8 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1777 a93627514ef29832d9b52f51f880bec6 63 Gene3D G3DSA:1.20.5.1150 16 53 2.1E-11 T 11-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2395 2738fbaeddf4af8a68c776703e2141a3 1002 SUPERFAMILY SSF49464 32 113 1.01E-18 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_2395 2738fbaeddf4af8a68c776703e2141a3 1002 Gene3D G3DSA:2.60.40.1120 32 104 1.6E-9 T 11-10-2018 TF3313_2395 2738fbaeddf4af8a68c776703e2141a3 1002 Pfam PF00593 TonB dependent receptor 396 1001 2.3E-31 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_2395 2738fbaeddf4af8a68c776703e2141a3 1002 Pfam PF13715 CarboxypepD_reg-like domain 33 114 1.6E-18 T 11-10-2018 TF3313_2395 2738fbaeddf4af8a68c776703e2141a3 1002 Gene3D G3DSA:2.170.130.10 105 234 1.2E-23 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_2395 2738fbaeddf4af8a68c776703e2141a3 1002 Pfam PF07715 TonB-dependent Receptor Plug Domain 124 229 4.2E-18 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_2395 2738fbaeddf4af8a68c776703e2141a3 1002 SUPERFAMILY SSF56935 112 1002 3.16E-85 T 11-10-2018 TF3313_2395 2738fbaeddf4af8a68c776703e2141a3 1002 Gene3D G3DSA:2.40.170.20 293 782 1.0E-23 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_2395 2738fbaeddf4af8a68c776703e2141a3 1002 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 32 1002 5.9E-247 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_2395 2738fbaeddf4af8a68c776703e2141a3 1002 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 205 235 1.1E-17 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_2675 5f7cd9c8613ab4e53f53cc863a2b44e3 528 Gene3D G3DSA:3.30.1360.150 346 462 8.4E-135 T 11-10-2018 TF3313_2675 5f7cd9c8613ab4e53f53cc863a2b44e3 528 SUPERFAMILY SSF53649 15 509 2.06E-25 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 TF3313_2675 5f7cd9c8613ab4e53f53cc863a2b44e3 528 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 27 465 1.7E-25 T 11-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 TF3313_2675 5f7cd9c8613ab4e53f53cc863a2b44e3 528 Gene3D G3DSA:3.40.720.10 24 519 8.4E-135 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 TF3313_2675 5f7cd9c8613ab4e53f53cc863a2b44e3 528 PIRSF PIRSF031924 1 528 2.8E-122 T 11-10-2018 IPR026263 Alkaline phosphatase, prokaryotic GO:0004035 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 TF3313_2576 84f3126ac9f78e81334ca52095e26508 316 Pfam PF00535 Glycosyl transferase family 2 4 167 1.1E-35 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TF3313_2576 84f3126ac9f78e81334ca52095e26508 316 Gene3D G3DSA:3.90.550.10 1 214 3.4E-42 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_2576 84f3126ac9f78e81334ca52095e26508 316 SUPERFAMILY SSF53448 1 260 7.67E-48 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_1996 7031973c6ccd9200987e2b658e609215 730 Gene3D G3DSA:2.60.40.10 616 729 3.0E-37 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_1996 7031973c6ccd9200987e2b658e609215 730 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 363 613 3.7E-54 T 11-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 TF3313_1996 7031973c6ccd9200987e2b658e609215 730 SMART SM01217 650 719 3.3E-34 T 11-10-2018 IPR026891 Fibronectin type III-like domain TF3313_1996 7031973c6ccd9200987e2b658e609215 730 Gene3D G3DSA:3.40.50.1700 347 615 7.9E-90 T 11-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 TF3313_1996 7031973c6ccd9200987e2b658e609215 730 Pfam PF14310 Fibronectin type III-like domain 650 719 5.4E-23 T 11-10-2018 IPR026891 Fibronectin type III-like domain TF3313_1996 7031973c6ccd9200987e2b658e609215 730 SUPERFAMILY SSF52279 362 616 5.49E-54 T 11-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 TF3313_1996 7031973c6ccd9200987e2b658e609215 730 Gene3D G3DSA:3.20.20.300 1 346 4.7E-140 T 11-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 TF3313_1996 7031973c6ccd9200987e2b658e609215 730 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 13 321 8.1E-90 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 TF3313_1996 7031973c6ccd9200987e2b658e609215 730 PRINTS PR00133 Glycosyl hydrolase family 3 signature 174 190 5.3E-22 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 TF3313_1996 7031973c6ccd9200987e2b658e609215 730 PRINTS PR00133 Glycosyl hydrolase family 3 signature 137 153 5.3E-22 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 TF3313_1996 7031973c6ccd9200987e2b658e609215 730 PRINTS PR00133 Glycosyl hydrolase family 3 signature 72 88 5.3E-22 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 TF3313_1996 7031973c6ccd9200987e2b658e609215 730 PRINTS PR00133 Glycosyl hydrolase family 3 signature 91 110 5.3E-22 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 TF3313_1996 7031973c6ccd9200987e2b658e609215 730 PRINTS PR00133 Glycosyl hydrolase family 3 signature 244 262 5.3E-22 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 TF3313_1996 7031973c6ccd9200987e2b658e609215 730 SUPERFAMILY SSF51445 2 360 4.21E-107 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily TF3313_2678 5ac7841322762ef3bbd67c11e1b52986 695 Gene3D G3DSA:1.25.40.10 128 273 7.2E-31 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2678 5ac7841322762ef3bbd67c11e1b52986 695 Pfam PF13374 Tetratricopeptide repeat 195 225 0.0023 T 11-10-2018 TF3313_2678 5ac7841322762ef3bbd67c11e1b52986 695 Gene3D G3DSA:1.25.40.10 274 414 3.2E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2678 5ac7841322762ef3bbd67c11e1b52986 695 Gene3D G3DSA:1.25.40.10 19 127 1.9E-21 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2678 5ac7841322762ef3bbd67c11e1b52986 695 Gene3D G3DSA:1.25.40.10 575 693 6.6E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2678 5ac7841322762ef3bbd67c11e1b52986 695 SMART SM00028 57 90 0.26 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2678 5ac7841322762ef3bbd67c11e1b52986 695 SMART SM00028 193 226 0.0013 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2678 5ac7841322762ef3bbd67c11e1b52986 695 SMART SM00028 499 532 0.36 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2678 5ac7841322762ef3bbd67c11e1b52986 695 SMART SM00028 261 294 2.1 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2678 5ac7841322762ef3bbd67c11e1b52986 695 SMART SM00028 91 124 7.8E-7 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2678 5ac7841322762ef3bbd67c11e1b52986 695 SMART SM00028 295 328 0.86 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2678 5ac7841322762ef3bbd67c11e1b52986 695 SMART SM00028 159 192 8.2E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2678 5ac7841322762ef3bbd67c11e1b52986 695 SMART SM00028 329 362 28.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2678 5ac7841322762ef3bbd67c11e1b52986 695 SMART SM00028 617 650 6.4E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2678 5ac7841322762ef3bbd67c11e1b52986 695 SMART SM00028 125 158 37.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2678 5ac7841322762ef3bbd67c11e1b52986 695 SMART SM00028 227 260 0.034 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2678 5ac7841322762ef3bbd67c11e1b52986 695 SMART SM00028 651 684 96.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2678 5ac7841322762ef3bbd67c11e1b52986 695 SUPERFAMILY SSF48452 31 551 2.01E-50 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2678 5ac7841322762ef3bbd67c11e1b52986 695 Pfam PF13432 Tetratricopeptide repeat 266 327 3.3E-6 T 11-10-2018 TF3313_2678 5ac7841322762ef3bbd67c11e1b52986 695 Pfam PF13432 Tetratricopeptide repeat 130 192 1.2E-7 T 11-10-2018 TF3313_2678 5ac7841322762ef3bbd67c11e1b52986 695 Gene3D G3DSA:1.25.40.10 441 566 4.9E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2678 5ac7841322762ef3bbd67c11e1b52986 695 SUPERFAMILY SSF48452 484 679 3.49E-21 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2678 5ac7841322762ef3bbd67c11e1b52986 695 Pfam PF13414 TPR repeat 624 665 1.3E-7 T 11-10-2018 TF3313_2678 5ac7841322762ef3bbd67c11e1b52986 695 Pfam PF00515 Tetratricopeptide repeat 91 124 3.9E-8 T 11-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 TF3313_1155 e03f1babbdadf6988f440abe674a91cc 719 Gene3D G3DSA:3.40.50.300 474 718 3.7E-84 T 11-10-2018 TF3313_1155 e03f1babbdadf6988f440abe674a91cc 719 SUPERFAMILY SSF52540 471 715 2.77E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1155 e03f1babbdadf6988f440abe674a91cc 719 Gene3D G3DSA:3.90.70.10 1 146 9.9E-46 T 11-10-2018 TF3313_1155 e03f1babbdadf6988f440abe674a91cc 719 ProSitePatterns PS00211 ABC transporters family signature. 616 630 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TF3313_1155 e03f1babbdadf6988f440abe674a91cc 719 Pfam PF00005 ABC transporter 496 644 7.9E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TF3313_1155 e03f1babbdadf6988f440abe674a91cc 719 Pfam PF03412 Peptidase C39 family 7 137 1.9E-33 T 11-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 TF3313_1155 e03f1babbdadf6988f440abe674a91cc 719 SMART SM00382 504 691 2.1E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_1155 e03f1babbdadf6988f440abe674a91cc 719 TIGRFAM TIGR01193 bacteriocin_ABC: ABC-type bacteriocin transporter 9 713 2.1E-159 T 11-10-2018 IPR005897 Peptidase C39, ABC-type bacteriocin transporter GO:0008234|GO:0016020|GO:0022885|GO:0043213 TF3313_1155 e03f1babbdadf6988f440abe674a91cc 719 Gene3D G3DSA:1.20.1560.10 147 464 5.7E-76 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TF3313_1155 e03f1babbdadf6988f440abe674a91cc 719 SUPERFAMILY SSF90123 152 462 4.19E-67 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TF3313_1155 e03f1babbdadf6988f440abe674a91cc 719 Pfam PF00664 ABC transporter transmembrane region 166 432 4.4E-46 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TF3313_1511 aa00fcd33e87c7dc7359dfd8ec5b8f14 311 Gene3D G3DSA:3.80.30.20 55 270 1.5E-15 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TF3313_1511 aa00fcd33e87c7dc7359dfd8ec5b8f14 311 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 32 309 8.4E-83 T 11-10-2018 IPR005911 Protein YhcC-like GO:0051536 TF3313_1511 aa00fcd33e87c7dc7359dfd8ec5b8f14 311 Pfam PF04055 Radical SAM superfamily 57 218 8.4E-13 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TF3313_1511 aa00fcd33e87c7dc7359dfd8ec5b8f14 311 SMART SM00729 37 266 3.8E-32 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TF3313_1511 aa00fcd33e87c7dc7359dfd8ec5b8f14 311 Pfam PF16199 Radical_SAM C-terminal domain 226 309 6.5E-18 T 11-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 TF3313_1511 aa00fcd33e87c7dc7359dfd8ec5b8f14 311 SUPERFAMILY SSF102114 30 305 1.1E-40 T 11-10-2018 TF3313_2770 aa00fcd33e87c7dc7359dfd8ec5b8f14 311 Gene3D G3DSA:3.80.30.20 55 270 1.5E-15 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TF3313_2770 aa00fcd33e87c7dc7359dfd8ec5b8f14 311 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 32 309 8.4E-83 T 11-10-2018 IPR005911 Protein YhcC-like GO:0051536 TF3313_2770 aa00fcd33e87c7dc7359dfd8ec5b8f14 311 Pfam PF04055 Radical SAM superfamily 57 218 8.4E-13 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TF3313_2770 aa00fcd33e87c7dc7359dfd8ec5b8f14 311 SMART SM00729 37 266 3.8E-32 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TF3313_2770 aa00fcd33e87c7dc7359dfd8ec5b8f14 311 Pfam PF16199 Radical_SAM C-terminal domain 226 309 6.5E-18 T 11-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 TF3313_2770 aa00fcd33e87c7dc7359dfd8ec5b8f14 311 SUPERFAMILY SSF102114 30 305 1.1E-40 T 11-10-2018 TF3313_1488 91e9e6d9e5e1a21b9d75d4376cae8aab 326 SUPERFAMILY SSF161111 30 225 1.19E-58 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily TF3313_1488 91e9e6d9e5e1a21b9d75d4376cae8aab 326 Gene3D G3DSA:1.20.1510.10 30 224 3.2E-49 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily TF3313_1488 91e9e6d9e5e1a21b9d75d4376cae8aab 326 SUPERFAMILY SSF160240 228 306 1.07E-12 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 TF3313_1488 91e9e6d9e5e1a21b9d75d4376cae8aab 326 Pfam PF01545 Cation efflux family 36 224 1.8E-49 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TF3313_1488 91e9e6d9e5e1a21b9d75d4376cae8aab 326 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 31 306 2.1E-88 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TF3313_2679 081301e13b6657ef8d27bf93029a5da7 185 Hamap MF_00163 Peptide deformylase [def]. 1 169 28.529 T 11-10-2018 IPR023635 Peptide deformylase TF3313_2679 081301e13b6657ef8d27bf93029a5da7 185 PRINTS PR01576 Peptide deformylase signature 96 107 2.3E-31 T 11-10-2018 IPR023635 Peptide deformylase TF3313_2679 081301e13b6657ef8d27bf93029a5da7 185 PRINTS PR01576 Peptide deformylase signature 127 156 2.3E-31 T 11-10-2018 IPR023635 Peptide deformylase TF3313_2679 081301e13b6657ef8d27bf93029a5da7 185 PRINTS PR01576 Peptide deformylase signature 108 126 2.3E-31 T 11-10-2018 IPR023635 Peptide deformylase TF3313_2679 081301e13b6657ef8d27bf93029a5da7 185 PRINTS PR01576 Peptide deformylase signature 32 61 2.3E-31 T 11-10-2018 IPR023635 Peptide deformylase TF3313_2679 081301e13b6657ef8d27bf93029a5da7 185 SUPERFAMILY SSF56420 1 170 1.13E-55 T 11-10-2018 IPR036821 Peptide deformylase superfamily TF3313_2679 081301e13b6657ef8d27bf93029a5da7 185 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 163 1.1E-42 T 11-10-2018 IPR023635 Peptide deformylase TF3313_2679 081301e13b6657ef8d27bf93029a5da7 185 Gene3D G3DSA:3.90.45.10 1 181 2.4E-58 T 11-10-2018 IPR036821 Peptide deformylase superfamily TF3313_2679 081301e13b6657ef8d27bf93029a5da7 185 Pfam PF01327 Polypeptide deformylase 3 158 3.2E-50 T 11-10-2018 IPR023635 Peptide deformylase TF3313_2679 081301e13b6657ef8d27bf93029a5da7 185 PIRSF PIRSF004749 1 180 4.8E-55 T 11-10-2018 IPR023635 Peptide deformylase TF3313_2816 27c6e3d581853fa8e619d1dd7af3307c 273 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 35 49 1.1E-10 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 TF3313_2816 27c6e3d581853fa8e619d1dd7af3307c 273 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 14 30 1.1E-10 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 TF3313_2816 27c6e3d581853fa8e619d1dd7af3307c 273 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 55 68 1.1E-10 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 TF3313_2816 27c6e3d581853fa8e619d1dd7af3307c 273 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 178 190 1.1E-10 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 TF3313_2816 27c6e3d581853fa8e619d1dd7af3307c 273 Gene3D G3DSA:1.10.1020.10 62 158 1.3E-34 T 11-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 TF3313_2816 27c6e3d581853fa8e619d1dd7af3307c 273 PIRSF PIRSF000398 6 264 2.5E-38 T 11-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 TF3313_2816 27c6e3d581853fa8e619d1dd7af3307c 273 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 14 203 2.4E-22 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 TF3313_2816 27c6e3d581853fa8e619d1dd7af3307c 273 SUPERFAMILY SSF53335 8 260 1.83E-43 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_2816 27c6e3d581853fa8e619d1dd7af3307c 273 Gene3D G3DSA:3.40.50.150 12 227 1.3E-34 T 11-10-2018 TF3313_2477 c1b80b0e9e3f7247b9ba55745f0b78cd 634 Pfam PF14121 Putative porin 1 634 3.6E-197 T 11-10-2018 IPR025631 Putative porin-10 TF3313_1390 f69ce76554ac42b0509d16e13e74d784 191 Gene3D G3DSA:1.10.1740.10 4 120 1.2E-14 T 11-10-2018 TF3313_1390 f69ce76554ac42b0509d16e13e74d784 191 Gene3D G3DSA:1.10.10.10 121 184 1.1E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_1390 f69ce76554ac42b0509d16e13e74d784 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 180 6.9E-28 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TF3313_1390 f69ce76554ac42b0509d16e13e74d784 191 SUPERFAMILY SSF88659 115 181 1.83E-16 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TF3313_1390 f69ce76554ac42b0509d16e13e74d784 191 Pfam PF08281 Sigma-70, region 4 124 176 2.0E-19 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TF3313_1390 f69ce76554ac42b0509d16e13e74d784 191 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 24 180 6.0E-51 T 11-10-2018 IPR014327 RNA polymerase sigma-70, Bacteroidetes type TF3313_1390 f69ce76554ac42b0509d16e13e74d784 191 SUPERFAMILY SSF88946 9 110 3.92E-18 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_1390 f69ce76554ac42b0509d16e13e74d784 191 Pfam PF04542 Sigma-70 region 2 30 93 7.4E-7 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_1741 4607c16011d014ef2977e5a8b63a5ee9 196 Gene3D G3DSA:2.40.50.140 1 65 1.8E-20 T 11-10-2018 TF3313_1741 4607c16011d014ef2977e5a8b63a5ee9 196 Pfam PF14520 Helix-hairpin-helix domain 71 128 1.3E-14 T 11-10-2018 TF3313_1741 4607c16011d014ef2977e5a8b63a5ee9 196 SMART SM00278 72 91 1.2 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 TF3313_1741 4607c16011d014ef2977e5a8b63a5ee9 196 SMART SM00278 107 126 1.1 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 TF3313_1741 4607c16011d014ef2977e5a8b63a5ee9 196 Pfam PF07499 RuvA, C-terminal domain 153 193 1.9E-10 T 11-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 TF3313_1741 4607c16011d014ef2977e5a8b63a5ee9 196 Gene3D G3DSA:1.10.8.10 149 196 6.1E-17 T 11-10-2018 TF3313_1741 4607c16011d014ef2977e5a8b63a5ee9 196 SUPERFAMILY SSF47781 64 132 5.19E-20 T 11-10-2018 IPR010994 RuvA domain 2-like TF3313_1741 4607c16011d014ef2977e5a8b63a5ee9 196 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 193 26.679 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 TF3313_1741 4607c16011d014ef2977e5a8b63a5ee9 196 SUPERFAMILY SSF50249 1 62 3.31E-13 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TF3313_1741 4607c16011d014ef2977e5a8b63a5ee9 196 SUPERFAMILY SSF46929 151 196 2.22E-12 T 11-10-2018 IPR036267 RuvA, C-terminal domain superfamily TF3313_1741 4607c16011d014ef2977e5a8b63a5ee9 196 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 194 4.1E-44 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 TF3313_1741 4607c16011d014ef2977e5a8b63a5ee9 196 Gene3D G3DSA:1.10.150.20 66 133 5.0E-24 T 11-10-2018 TF3313_1741 4607c16011d014ef2977e5a8b63a5ee9 196 Pfam PF01330 RuvA N terminal domain 1 61 1.8E-19 T 11-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 TF3313_0893 9e8189bd1e6f391654857245340fd539 327 Gene3D G3DSA:1.10.600.10 20 327 1.4E-90 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily TF3313_0893 9e8189bd1e6f391654857245340fd539 327 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 201 213 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site TF3313_0893 9e8189bd1e6f391654857245340fd539 327 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 76 90 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site TF3313_0893 9e8189bd1e6f391654857245340fd539 327 Pfam PF00348 Polyprenyl synthetase 26 255 1.4E-69 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 TF3313_0893 9e8189bd1e6f391654857245340fd539 327 SUPERFAMILY SSF48576 19 326 1.7E-84 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily TF3313_0665 f3c1106ef59763afcf2b0f470f09a442 70 Pfam PF13619 KTSC domain 7 62 1.8E-26 T 11-10-2018 IPR025309 KTSC domain TF3313_0291 a4e14fd3d4f564ffee94d30b449bf8aa 621 Pfam PF05569 BlaR1 peptidase M56 138 258 3.5E-13 T 11-10-2018 IPR008756 Peptidase M56 TF3313_0291 a4e14fd3d4f564ffee94d30b449bf8aa 621 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 452 529 3.5E-21 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 TF3313_0291 a4e14fd3d4f564ffee94d30b449bf8aa 621 SUPERFAMILY SSF49464 321 400 1.57E-10 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_0291 a4e14fd3d4f564ffee94d30b449bf8aa 621 SUPERFAMILY SSF74653 445 527 1.7E-21 T 11-10-2018 TF3313_0291 a4e14fd3d4f564ffee94d30b449bf8aa 621 Pfam PF13715 CarboxypepD_reg-like domain 323 403 1.1E-12 T 11-10-2018 TF3313_0291 a4e14fd3d4f564ffee94d30b449bf8aa 621 Gene3D G3DSA:3.30.1150.10 429 531 9.8E-26 T 11-10-2018 TF3313_0291 a4e14fd3d4f564ffee94d30b449bf8aa 621 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 454 529 4.8E-11 T 11-10-2018 IPR006260 TonB/TolA, C-terminal TF3313_1491 bd1edc1b4dc1fd909cef4bedde71f0ad 357 Pfam PF01546 Peptidase family M20/M25/M40 64 348 2.4E-22 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 TF3313_1491 bd1edc1b4dc1fd909cef4bedde71f0ad 357 SUPERFAMILY SSF53187 6 350 1.39E-41 T 11-10-2018 TF3313_1491 bd1edc1b4dc1fd909cef4bedde71f0ad 357 Pfam PF07687 Peptidase dimerisation domain 166 264 1.7E-16 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain TF3313_1491 bd1edc1b4dc1fd909cef4bedde71f0ad 357 Gene3D G3DSA:3.40.630.10 10 343 2.4E-104 T 11-10-2018 TF3313_1491 bd1edc1b4dc1fd909cef4bedde71f0ad 357 SUPERFAMILY SSF55031 171 265 4.34E-18 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain TF3313_1491 bd1edc1b4dc1fd909cef4bedde71f0ad 357 Gene3D G3DSA:3.30.70.360 169 275 2.4E-104 T 11-10-2018 TF3313_1491 bd1edc1b4dc1fd909cef4bedde71f0ad 357 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 63 72 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 TF3313_2172 eb5b0aac0c323c11995ac45d2446ce63 174 Pfam PF00210 Ferritin-like domain 9 144 2.2E-40 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 TF3313_2172 eb5b0aac0c323c11995ac45d2446ce63 174 Gene3D G3DSA:1.20.1260.10 1 170 8.1E-54 T 11-10-2018 IPR012347 Ferritin-like TF3313_2172 eb5b0aac0c323c11995ac45d2446ce63 174 SUPERFAMILY SSF47240 1 159 1.3E-58 T 11-10-2018 IPR009078 Ferritin-like superfamily TF3313_2610 0b09b945b140d5077bdd4d93865356b2 1049 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 24 1049 7.9E-250 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_2610 0b09b945b140d5077bdd4d93865356b2 1049 Gene3D G3DSA:2.170.130.10 97 235 1.9E-31 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_2610 0b09b945b140d5077bdd4d93865356b2 1049 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 206 236 4.3E-18 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_2610 0b09b945b140d5077bdd4d93865356b2 1049 SUPERFAMILY SSF56935 100 1048 1.06E-85 T 11-10-2018 TF3313_2610 0b09b945b140d5077bdd4d93865356b2 1049 Pfam PF13715 CarboxypepD_reg-like domain 25 104 1.7E-14 T 11-10-2018 TF3313_2610 0b09b945b140d5077bdd4d93865356b2 1049 Pfam PF07715 TonB-dependent Receptor Plug Domain 112 230 9.2E-19 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_2610 0b09b945b140d5077bdd4d93865356b2 1049 Gene3D G3DSA:2.60.40.1120 24 96 4.1E-7 T 11-10-2018 TF3313_2610 0b09b945b140d5077bdd4d93865356b2 1049 SUPERFAMILY SSF49464 23 102 1.06E-13 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_0197 7c4482463174f5d2db8bab620477dc7f 466 TIGRFAM TIGR00797 matE: MATE efflux family protein 42 436 9.2E-71 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TF3313_0197 7c4482463174f5d2db8bab620477dc7f 466 Pfam PF01554 MatE 264 424 3.1E-26 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TF3313_0197 7c4482463174f5d2db8bab620477dc7f 466 Pfam PF01554 MatE 42 202 3.4E-35 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TF3313_0197 7c4482463174f5d2db8bab620477dc7f 466 PIRSF PIRSF006603 19 466 1.6E-122 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TF3313_2427 e32b9a0d3cca822f18611e7ce5e490bd 526 ProSitePatterns PS00149 Sulfatases signature 2. 127 137 - T 11-10-2018 IPR024607 Sulfatase, conserved site TF3313_2427 e32b9a0d3cca822f18611e7ce5e490bd 526 Pfam PF16347 Domain of unknown function (DUF4976) 417 519 4.7E-47 T 11-10-2018 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096|Reactome: R-HSA-2206307 TF3313_2427 e32b9a0d3cca822f18611e7ce5e490bd 526 ProSitePatterns PS00523 Sulfatases signature 1. 85 97 - T 11-10-2018 IPR024607 Sulfatase, conserved site TF3313_2427 e32b9a0d3cca822f18611e7ce5e490bd 526 Gene3D G3DSA:3.40.720.10 261 526 4.4E-68 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 TF3313_2427 e32b9a0d3cca822f18611e7ce5e490bd 526 Pfam PF00884 Sulfatase 40 415 1.6E-63 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 TF3313_2427 e32b9a0d3cca822f18611e7ce5e490bd 526 Gene3D G3DSA:3.40.720.10 38 253 1.3E-51 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 TF3313_2427 e32b9a0d3cca822f18611e7ce5e490bd 526 SUPERFAMILY SSF53649 37 519 3.21E-121 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 TF3313_2708 40ce169790436aea49176a98672d33ff 726 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 50 449 1.7E-83 T 11-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 TF3313_2708 40ce169790436aea49176a98672d33ff 726 Pfam PF00326 Prolyl oligopeptidase family 508 723 5.4E-66 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 TF3313_2708 40ce169790436aea49176a98672d33ff 726 Gene3D G3DSA:2.130.10.120 118 450 2.1E-245 T 11-10-2018 TF3313_2708 40ce169790436aea49176a98672d33ff 726 SUPERFAMILY SSF50993 47 456 1.8E-79 T 11-10-2018 TF3313_2708 40ce169790436aea49176a98672d33ff 726 SUPERFAMILY SSF53474 460 701 2.27E-45 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TF3313_2708 40ce169790436aea49176a98672d33ff 726 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 576 596 5.5E-49 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 TF3313_2708 40ce169790436aea49176a98672d33ff 726 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 546 565 5.5E-49 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 TF3313_2708 40ce169790436aea49176a98672d33ff 726 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 492 510 5.5E-49 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 TF3313_2708 40ce169790436aea49176a98672d33ff 726 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 652 674 5.5E-49 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 TF3313_2708 40ce169790436aea49176a98672d33ff 726 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 518 542 5.5E-49 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 TF3313_2708 40ce169790436aea49176a98672d33ff 726 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 634 649 5.5E-49 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 TF3313_2708 40ce169790436aea49176a98672d33ff 726 Gene3D G3DSA:3.40.50.1820 69 718 2.1E-245 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TF3313_1611 6fc252bea6d644fef3b75bb78631340a 178 Hamap MF_00109 Shikimate kinase [aroK]. 1 170 23.835 T 11-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 TF3313_1611 6fc252bea6d644fef3b75bb78631340a 178 SUPERFAMILY SSF52540 1 150 3.74E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1611 6fc252bea6d644fef3b75bb78631340a 178 Pfam PF01202 Shikimate kinase 10 152 6.9E-41 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 TF3313_1611 6fc252bea6d644fef3b75bb78631340a 178 Gene3D G3DSA:3.40.50.300 1 175 6.5E-50 T 11-10-2018 TF3313_1611 6fc252bea6d644fef3b75bb78631340a 178 PRINTS PR01100 Shikimate kinase family signature 4 19 5.7E-20 T 11-10-2018 TF3313_1611 6fc252bea6d644fef3b75bb78631340a 178 PRINTS PR01100 Shikimate kinase family signature 95 112 5.7E-20 T 11-10-2018 TF3313_1611 6fc252bea6d644fef3b75bb78631340a 178 PRINTS PR01100 Shikimate kinase family signature 28 41 5.7E-20 T 11-10-2018 TF3313_1611 6fc252bea6d644fef3b75bb78631340a 178 PRINTS PR01100 Shikimate kinase family signature 56 64 5.7E-20 T 11-10-2018 TF3313_1611 6fc252bea6d644fef3b75bb78631340a 178 PRINTS PR01100 Shikimate kinase family signature 74 83 5.7E-20 T 11-10-2018 TF3313_2860 9f592132af5564b4986b90da3d170442 247 Gene3D G3DSA:3.40.50.300 1 247 8.0E-67 T 11-10-2018 TF3313_2860 9f592132af5564b4986b90da3d170442 247 SUPERFAMILY SSF52540 1 245 7.01E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2860 9f592132af5564b4986b90da3d170442 247 Pfam PF13614 AAA domain 3 171 3.9E-50 T 11-10-2018 IPR025669 AAA domain TF3313_1601 978f2a957e8887afafbffe98592b4264 331 Pfam PF03385 STELLO glycosyltransferases 227 330 6.5E-12 T 11-10-2018 IPR005049 STELLO-like TF3313_2782 15557378670405fe2dbe0867f4887e43 159 Pfam PF04304 Protein of unknown function (DUF454) 41 156 8.3E-39 T 11-10-2018 IPR007401 Protein of unknown function DUF454 TF3313_2782 15557378670405fe2dbe0867f4887e43 159 PIRSF PIRSF016789 40 159 2.5E-39 T 11-10-2018 IPR007401 Protein of unknown function DUF454 TF3313_1746 5a2a163b7b275dbd556cbf59bc4f2177 247 Pfam PF01066 CDP-alcohol phosphatidyltransferase 8 71 5.8E-12 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TF3313_1746 5a2a163b7b275dbd556cbf59bc4f2177 247 Gene3D G3DSA:1.20.120.1760 3 166 6.0E-11 T 11-10-2018 TF3313_1746 5a2a163b7b275dbd556cbf59bc4f2177 247 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TF3313_0771 6665e8cbc41e60d109a7f88a53ee5ede 579 Gene3D G3DSA:3.40.720.10 206 532 1.9E-67 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 TF3313_0771 6665e8cbc41e60d109a7f88a53ee5ede 579 SUPERFAMILY SSF53649 219 553 9.38E-25 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 TF3313_0771 6665e8cbc41e60d109a7f88a53ee5ede 579 Pfam PF00884 Sulfatase 217 501 3.2E-35 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 TF3313_0681 181b89384eb13c3d957f9ceb46d97345 861 SUPERFAMILY SSF48334 258 555 6.54E-87 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily TF3313_0681 181b89384eb13c3d957f9ceb46d97345 861 Pfam PF05190 MutS family domain IV 418 508 5.5E-27 T 11-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 TF3313_0681 181b89384eb13c3d957f9ceb46d97345 861 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 1 850 23.857 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 TF3313_0681 181b89384eb13c3d957f9ceb46d97345 861 Gene3D G3DSA:1.10.1420.10 390 525 1.9E-98 T 11-10-2018 TF3313_0681 181b89384eb13c3d957f9ceb46d97345 861 Gene3D G3DSA:3.40.1170.10 1 111 2.3E-41 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 TF3313_0681 181b89384eb13c3d957f9ceb46d97345 861 Pfam PF00488 MutS domain V 604 792 2.5E-78 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TF3313_0681 181b89384eb13c3d957f9ceb46d97345 861 SUPERFAMILY SSF53150 104 257 1.57E-38 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 TF3313_0681 181b89384eb13c3d957f9ceb46d97345 861 Gene3D G3DSA:3.40.50.300 558 856 2.2E-97 T 11-10-2018 TF3313_0681 181b89384eb13c3d957f9ceb46d97345 861 PIRSF PIRSF037677 1 806 1.4E-165 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 TF3313_0681 181b89384eb13c3d957f9ceb46d97345 861 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 681 697 - T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TF3313_0681 181b89384eb13c3d957f9ceb46d97345 861 SMART SM00533 273 581 1.6E-92 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 TF3313_0681 181b89384eb13c3d957f9ceb46d97345 861 SUPERFAMILY SSF55271 1 103 8.63E-37 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 TF3313_0681 181b89384eb13c3d957f9ceb46d97345 861 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 1 855 2.2E-273 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 TF3313_0681 181b89384eb13c3d957f9ceb46d97345 861 Gene3D G3DSA:3.30.420.110 117 251 1.4E-32 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 TF3313_0681 181b89384eb13c3d957f9ceb46d97345 861 SMART SM00534 600 789 5.4E-105 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TF3313_0681 181b89384eb13c3d957f9ceb46d97345 861 Pfam PF01624 MutS domain I 1 108 3.0E-37 T 11-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 TF3313_0681 181b89384eb13c3d957f9ceb46d97345 861 Gene3D G3DSA:1.10.1420.10 257 550 1.9E-98 T 11-10-2018 TF3313_0681 181b89384eb13c3d957f9ceb46d97345 861 Pfam PF05192 MutS domain III 261 549 1.6E-41 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 TF3313_0681 181b89384eb13c3d957f9ceb46d97345 861 Pfam PF05188 MutS domain II 118 243 3.9E-18 T 11-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 TF3313_0681 181b89384eb13c3d957f9ceb46d97345 861 SUPERFAMILY SSF52540 557 792 1.74E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0542 01550d1218e6a33b73416afc31367465 331 Gene3D G3DSA:3.55.50.30 252 327 6.1E-13 T 11-10-2018 TF3313_0542 01550d1218e6a33b73416afc31367465 331 PIRSF PIRSF018266 1 330 3.4E-73 T 11-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component TF3313_0542 01550d1218e6a33b73416afc31367465 331 Pfam PF16344 Domain of unknown function (DUF4974) 224 323 6.2E-24 T 11-10-2018 IPR032508 Protein FecR, C-terminal TF3313_0542 01550d1218e6a33b73416afc31367465 331 Pfam PF04773 FecR protein 118 212 6.2E-18 T 11-10-2018 IPR006860 FecR protein TF3313_0542 01550d1218e6a33b73416afc31367465 331 Gene3D G3DSA:2.60.120.1440 107 251 5.0E-45 T 11-10-2018 TF3313_1181 ae2f489fb45e38ad6cd4f0a193bac008 395 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 226 5.1E-18 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal TF3313_1181 ae2f489fb45e38ad6cd4f0a193bac008 395 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 242 345 2.0E-18 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal TF3313_1181 ae2f489fb45e38ad6cd4f0a193bac008 395 SMART SM00825 Beta-ketoacyl synthase 80 389 1.6E-4 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain TF3313_1181 ae2f489fb45e38ad6cd4f0a193bac008 395 Gene3D G3DSA:3.40.47.10 243 383 3.9E-28 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TF3313_1181 ae2f489fb45e38ad6cd4f0a193bac008 395 SUPERFAMILY SSF53901 3 226 2.88E-28 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TF3313_1181 ae2f489fb45e38ad6cd4f0a193bac008 395 SUPERFAMILY SSF53901 201 386 5.76E-33 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TF3313_1181 ae2f489fb45e38ad6cd4f0a193bac008 395 Gene3D G3DSA:3.40.47.10 4 238 4.1E-29 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TF3313_2301 fd9e811e4fed77425060a0a54d026490 411 Pfam PF04282 Family of unknown function (DUF438) 15 81 2.7E-19 T 11-10-2018 IPR007380 Domain of unknown function DUF438 TF3313_2301 fd9e811e4fed77425060a0a54d026490 411 SUPERFAMILY SSF55785 284 390 9.9E-7 T 11-10-2018 IPR035965 PAS domain superfamily TF3313_2301 fd9e811e4fed77425060a0a54d026490 411 Pfam PF13596 PAS domain 288 394 6.0E-23 T 11-10-2018 TF3313_2301 fd9e811e4fed77425060a0a54d026490 411 Pfam PF01814 Hemerythrin HHE cation binding domain 92 227 1.4E-20 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 TF3313_2301 fd9e811e4fed77425060a0a54d026490 411 Gene3D G3DSA:1.20.120.520 86 300 4.1E-58 T 11-10-2018 TF3313_2301 fd9e811e4fed77425060a0a54d026490 411 Gene3D G3DSA:3.30.450.20 301 400 5.3E-6 T 11-10-2018 TF3313_2642 0e4b9184cdf872090fec08d82a977ba9 201 SUPERFAMILY SSF88946 15 112 1.73E-24 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_2642 0e4b9184cdf872090fec08d82a977ba9 201 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 21 178 2.7E-52 T 11-10-2018 IPR014327 RNA polymerase sigma-70, Bacteroidetes type TF3313_2642 0e4b9184cdf872090fec08d82a977ba9 201 Pfam PF04542 Sigma-70 region 2 29 92 1.6E-16 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_2642 0e4b9184cdf872090fec08d82a977ba9 201 SUPERFAMILY SSF88659 105 181 1.74E-16 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TF3313_2642 0e4b9184cdf872090fec08d82a977ba9 201 Gene3D G3DSA:1.10.1740.10 7 89 4.7E-18 T 11-10-2018 TF3313_2642 0e4b9184cdf872090fec08d82a977ba9 201 Pfam PF08281 Sigma-70, region 4 123 174 8.2E-17 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TF3313_2642 0e4b9184cdf872090fec08d82a977ba9 201 Gene3D G3DSA:1.10.10.10 98 180 3.0E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_2642 0e4b9184cdf872090fec08d82a977ba9 201 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 178 4.5E-35 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TF3313_2159 9a0a9b55227d8afade358e2eb7605180 71 Gene3D G3DSA:3.40.50.1000 1 69 5.1E-13 T 11-10-2018 IPR023214 HAD superfamily TF3313_1565 e38d47d740e69c0aa302446b596be2b0 581 Gene3D G3DSA:1.20.1440.30 299 409 2.8E-19 T 11-10-2018 TF3313_1565 e38d47d740e69c0aa302446b596be2b0 581 Pfam PF05139 Erythromycin esterase 226 532 5.1E-14 T 11-10-2018 IPR007815 Erythromycin esterase GO:0046677 TF3313_1565 e38d47d740e69c0aa302446b596be2b0 581 Gene3D G3DSA:3.40.1660.10 190 495 2.8E-19 T 11-10-2018 TF3313_1565 e38d47d740e69c0aa302446b596be2b0 581 Gene3D G3DSA:3.30.1870.10 227 298 2.8E-19 T 11-10-2018 TF3313_1565 e38d47d740e69c0aa302446b596be2b0 581 SUPERFAMILY SSF159501 192 532 8.63E-44 T 11-10-2018 TF3313_1246 3fd5d647cac8877220604631e67eccc9 543 Gene3D G3DSA:3.40.309.10 297 494 3.6E-208 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 TF3313_1246 3fd5d647cac8877220604631e67eccc9 543 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 320 331 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 TF3313_1246 3fd5d647cac8877220604631e67eccc9 543 TIGRFAM TIGR01236 D1pyr5carbox1: 1-pyrroline-5-carboxylate dehydrogenase 13 539 6.0E-235 T 11-10-2018 IPR005931 Delta-1-pyrroline-5-carboxylate dehydrogenase GO:0003842|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853|Reactome: R-HSA-389661|Reactome: R-HSA-70688 TF3313_1246 3fd5d647cac8877220604631e67eccc9 543 SUPERFAMILY SSF53720 8 526 6.41E-123 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TF3313_1246 3fd5d647cac8877220604631e67eccc9 543 Gene3D G3DSA:3.40.605.10 15 526 3.6E-208 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 TF3313_1246 3fd5d647cac8877220604631e67eccc9 543 Pfam PF00171 Aldehyde dehydrogenase family 56 522 1.2E-102 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TF3313_1147 0252df0c291dd56fbb62fd4edb52f744 448 Gene3D G3DSA:3.30.565.10 278 436 1.1E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TF3313_1147 0252df0c291dd56fbb62fd4edb52f744 448 SUPERFAMILY SSF47384 203 276 7.06E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TF3313_1147 0252df0c291dd56fbb62fd4edb52f744 448 SMART SM00387 319 435 3.3E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TF3313_1147 0252df0c291dd56fbb62fd4edb52f744 448 SMART SM00388 207 275 1.5E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TF3313_1147 0252df0c291dd56fbb62fd4edb52f744 448 Gene3D G3DSA:1.10.287.130 195 277 1.8E-12 T 11-10-2018 TF3313_1147 0252df0c291dd56fbb62fd4edb52f744 448 Pfam PF00512 His Kinase A (phospho-acceptor) domain 209 274 9.6E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TF3313_1147 0252df0c291dd56fbb62fd4edb52f744 448 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 433 9.5E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TF3313_1147 0252df0c291dd56fbb62fd4edb52f744 448 SUPERFAMILY SSF55874 265 436 2.36E-42 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TF3313_1147 0252df0c291dd56fbb62fd4edb52f744 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 432 2.1E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_1147 0252df0c291dd56fbb62fd4edb52f744 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 370 2.1E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_1147 0252df0c291dd56fbb62fd4edb52f744 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 413 2.1E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_2862 5bd32f82403339774313024d39a62e76 194 SMART SM00857 2 136 3.2E-46 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 TF3313_2862 5bd32f82403339774313024d39a62e76 194 SUPERFAMILY SSF53041 1 135 8.76E-39 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 TF3313_2862 5bd32f82403339774313024d39a62e76 194 Gene3D G3DSA:3.40.50.1390 1 125 2.2E-42 T 11-10-2018 TF3313_2862 5bd32f82403339774313024d39a62e76 194 Pfam PF00239 Resolvase, N terminal domain 2 135 1.3E-37 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 TF3313_2862 5bd32f82403339774313024d39a62e76 194 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 TF3313_2123 38f1beef182138ba641f9325f68ddccf 210 Pfam PF02677 Uncharacterized BCR, COG1636 17 190 2.9E-59 T 11-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 TF3313_2123 38f1beef182138ba641f9325f68ddccf 210 Hamap MF_02089 Epoxyqueuosine reductase QueH [queH]. 17 193 29.502 T 11-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 TF3313_2568 dc6c9ce60c3b4c20b9e5824b58d2a9af 180 PIRSF PIRSF005216 6 172 2.0E-40 T 11-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 TF3313_2568 dc6c9ce60c3b4c20b9e5824b58d2a9af 180 Pfam PF01862 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) 9 169 4.2E-32 T 11-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 TF3313_2568 dc6c9ce60c3b4c20b9e5824b58d2a9af 180 SUPERFAMILY SSF56271 5 171 2.12E-33 T 11-10-2018 IPR016104 Pyruvoyl-dependent histidine/arginine decarboxylase GO:0006520|GO:0016831 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 TF3313_2568 dc6c9ce60c3b4c20b9e5824b58d2a9af 180 Gene3D G3DSA:3.50.20.10 3 170 1.1E-20 T 11-10-2018 IPR016105 Pyruvoyl-dependent histidine/arginine decarboxylase, 3-layer sandwich domain GO:0006520|GO:0016831 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 TF3313_2568 dc6c9ce60c3b4c20b9e5824b58d2a9af 180 ProDom PD010449 DECARBOXYLASE PYRUVOYL-DEPENDENT ARGININE SUBUNIT ALPHA CONTAINS: BETA PVLARGDC LYA DECARBOX 10 122 4.0E-5 T 11-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 TF3313_2720 d97756a2e10b669ff1cd00820c0e9efd 863 Gene3D G3DSA:2.60.40.1120 31 108 2.4E-5 T 11-10-2018 TF3313_2720 d97756a2e10b669ff1cd00820c0e9efd 863 Pfam PF13715 CarboxypepD_reg-like domain 32 117 2.3E-15 T 11-10-2018 TF3313_2720 d97756a2e10b669ff1cd00820c0e9efd 863 SUPERFAMILY SSF49464 31 115 7.85E-12 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_2037 e716031a46c8d4783594fc3edf9f31a9 146 Pfam PF17293 Arm DNA-binding domain 33 102 1.1E-6 T 11-10-2018 IPR035386 Arm, DNA-binding domain TF3313_1594 f6bf5126a2f9682783066426da04ab7c 402 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 73 394 4.9E-104 T 11-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 TF3313_1594 f6bf5126a2f9682783066426da04ab7c 402 Pfam PF03315 Serine dehydratase beta chain 3 71 1.8E-19 T 11-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 TF3313_1594 f6bf5126a2f9682783066426da04ab7c 402 Pfam PF03315 Serine dehydratase beta chain 70 115 1.6E-5 T 11-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 TF3313_1594 f6bf5126a2f9682783066426da04ab7c 402 SUPERFAMILY SSF143548 16 116 7.06E-26 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 TF3313_1594 f6bf5126a2f9682783066426da04ab7c 402 Pfam PF03313 Serine dehydratase alpha chain 152 393 3.9E-80 T 11-10-2018 IPR005130 Serine dehydratase-like, alpha subunit TF3313_1594 f6bf5126a2f9682783066426da04ab7c 402 Gene3D G3DSA:3.30.1330.90 70 118 1.7E-5 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 TF3313_1594 f6bf5126a2f9682783066426da04ab7c 402 Gene3D G3DSA:3.30.1330.90 10 69 3.1E-20 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 TF3313_1630 2f3ffc44659b04462af99846be8eb699 187 Pfam PF04542 Sigma-70 region 2 30 97 7.7E-17 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_1630 2f3ffc44659b04462af99846be8eb699 187 Pfam PF08281 Sigma-70, region 4 129 181 1.6E-13 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TF3313_1630 2f3ffc44659b04462af99846be8eb699 187 Gene3D G3DSA:1.10.1740.10 7 107 5.8E-31 T 11-10-2018 TF3313_1630 2f3ffc44659b04462af99846be8eb699 187 Gene3D G3DSA:1.10.10.10 108 187 6.9E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_1630 2f3ffc44659b04462af99846be8eb699 187 SUPERFAMILY SSF88946 6 115 3.3E-29 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_1630 2f3ffc44659b04462af99846be8eb699 187 SUPERFAMILY SSF88659 107 185 1.07E-14 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TF3313_1630 2f3ffc44659b04462af99846be8eb699 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 28 182 1.1E-32 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TF3313_1630 2f3ffc44659b04462af99846be8eb699 187 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 52 83 - T 11-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TF3313_2116 a9061f026c9578757ad6ec78edd3afb6 482 PIRSF PIRSF037903 32 481 6.4E-136 T 11-10-2018 IPR017317 Peptidase S8A, subtilisin-related, bacteroidetes-2 TF3313_2116 a9061f026c9578757ad6ec78edd3afb6 482 Gene3D G3DSA:3.40.50.200 173 477 5.1E-56 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 TF3313_2116 a9061f026c9578757ad6ec78edd3afb6 482 PRINTS PR00723 Subtilisin serine protease family (S8) signature 239 252 1.1E-6 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related TF3313_2116 a9061f026c9578757ad6ec78edd3afb6 482 PRINTS PR00723 Subtilisin serine protease family (S8) signature 198 217 1.1E-6 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related TF3313_2116 a9061f026c9578757ad6ec78edd3afb6 482 PRINTS PR00723 Subtilisin serine protease family (S8) signature 417 433 1.1E-6 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related TF3313_2116 a9061f026c9578757ad6ec78edd3afb6 482 Pfam PF00082 Subtilase family 198 466 2.6E-35 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 TF3313_2116 a9061f026c9578757ad6ec78edd3afb6 482 SUPERFAMILY SSF52743 78 474 7.46E-60 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 TF3313_0970 b5fd8143911a862a3cd7464a30fc58b3 529 Pfam PF01546 Peptidase family M20/M25/M40 114 522 5.6E-20 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 TF3313_0970 b5fd8143911a862a3cd7464a30fc58b3 529 Gene3D G3DSA:3.40.630.10 42 263 7.6E-57 T 11-10-2018 TF3313_0970 b5fd8143911a862a3cd7464a30fc58b3 529 Pfam PF07687 Peptidase dimerisation domain 252 334 6.4E-5 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain TF3313_0970 b5fd8143911a862a3cd7464a30fc58b3 529 Gene3D G3DSA:3.40.630.10 416 526 3.5E-25 T 11-10-2018 TF3313_0970 b5fd8143911a862a3cd7464a30fc58b3 529 PRINTS PR00934 X-His dipeptidase (M25) signature 492 514 1.0E-74 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TF3313_0970 b5fd8143911a862a3cd7464a30fc58b3 529 PRINTS PR00934 X-His dipeptidase (M25) signature 200 218 1.0E-74 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TF3313_0970 b5fd8143911a862a3cd7464a30fc58b3 529 PRINTS PR00934 X-His dipeptidase (M25) signature 142 160 1.0E-74 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TF3313_0970 b5fd8143911a862a3cd7464a30fc58b3 529 PRINTS PR00934 X-His dipeptidase (M25) signature 470 486 1.0E-74 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TF3313_0970 b5fd8143911a862a3cd7464a30fc58b3 529 PRINTS PR00934 X-His dipeptidase (M25) signature 121 140 1.0E-74 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TF3313_0970 b5fd8143911a862a3cd7464a30fc58b3 529 PRINTS PR00934 X-His dipeptidase (M25) signature 293 312 1.0E-74 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TF3313_0970 b5fd8143911a862a3cd7464a30fc58b3 529 PRINTS PR00934 X-His dipeptidase (M25) signature 176 193 1.0E-74 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TF3313_0970 b5fd8143911a862a3cd7464a30fc58b3 529 PRINTS PR00934 X-His dipeptidase (M25) signature 405 423 1.0E-74 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TF3313_0970 b5fd8143911a862a3cd7464a30fc58b3 529 PRINTS PR00934 X-His dipeptidase (M25) signature 248 265 1.0E-74 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TF3313_0970 b5fd8143911a862a3cd7464a30fc58b3 529 SUPERFAMILY SSF53187 53 523 2.46E-59 T 11-10-2018 TF3313_0970 b5fd8143911a862a3cd7464a30fc58b3 529 PIRSF PIRSF016599 42 527 6.3E-194 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TF3313_0970 b5fd8143911a862a3cd7464a30fc58b3 529 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 49 523 4.7E-185 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TF3313_1270 e568fb37505365ed73d9d5a9c09f3817 301 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 11 299 8.5E-107 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 TF3313_1270 e568fb37505365ed73d9d5a9c09f3817 301 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 10 91 1.0E-20 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 TF3313_1270 e568fb37505365ed73d9d5a9c09f3817 301 SUPERFAMILY SSF56349 10 292 1.15E-59 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TF3313_1270 e568fb37505365ed73d9d5a9c09f3817 301 Gene3D G3DSA:1.10.150.130 6 101 7.7E-23 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal TF3313_1270 e568fb37505365ed73d9d5a9c09f3817 301 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 8 299 54.179 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD TF3313_1270 e568fb37505365ed73d9d5a9c09f3817 301 Gene3D G3DSA:1.10.443.10 113 291 6.4E-61 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TF3313_1270 e568fb37505365ed73d9d5a9c09f3817 301 Pfam PF00589 Phage integrase family 114 284 4.8E-46 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TF3313_1737 d63329eb9a38fd98dbc0bd5bc5b1d869 344 Pfam PF01032 FecCD transport family 15 335 5.4E-79 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 TF3313_1737 d63329eb9a38fd98dbc0bd5bc5b1d869 344 Gene3D G3DSA:1.10.3470.10 4 342 5.8E-89 T 11-10-2018 IPR037294 ABC transporter, BtuC-like TF3313_1737 d63329eb9a38fd98dbc0bd5bc5b1d869 344 SUPERFAMILY SSF81345 5 335 4.71E-68 T 11-10-2018 IPR037294 ABC transporter, BtuC-like TF3313_0362 fcbfa2180bf34c898d3762058821bc18 536 Gene3D G3DSA:2.40.160.60 192 505 1.4E-18 T 11-10-2018 TF3313_0362 fcbfa2180bf34c898d3762058821bc18 536 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 284 536 7.2E-11 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) TF3313_0362 fcbfa2180bf34c898d3762058821bc18 536 SUPERFAMILY SSF56935 37 495 9.52E-18 T 11-10-2018 TF3313_0660 10f451b3735dacafbc911903af9c010f 313 Pfam PF03432 Relaxase/Mobilisation nuclease domain 11 239 7.8E-34 T 11-10-2018 IPR005094 Endonuclease relaxase, MobA/VirD2 TF3313_1334 a2e41c79a1eefd4db0b28823b02bb25e 1134 Pfam PF07715 TonB-dependent Receptor Plug Domain 221 328 2.0E-20 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_1334 a2e41c79a1eefd4db0b28823b02bb25e 1134 Gene3D G3DSA:2.60.40.1120 133 214 2.7E-5 T 11-10-2018 TF3313_1334 a2e41c79a1eefd4db0b28823b02bb25e 1134 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 131 1134 1.2E-280 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_1334 a2e41c79a1eefd4db0b28823b02bb25e 1134 Gene3D G3DSA:2.170.130.10 222 336 8.4E-24 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_1334 a2e41c79a1eefd4db0b28823b02bb25e 1134 Pfam PF13715 CarboxypepD_reg-like domain 133 213 4.0E-14 T 11-10-2018 TF3313_1334 a2e41c79a1eefd4db0b28823b02bb25e 1134 SUPERFAMILY SSF49464 132 211 3.66E-16 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_1334 a2e41c79a1eefd4db0b28823b02bb25e 1134 SMART SM00965 68 119 2.3E-6 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TF3313_1334 a2e41c79a1eefd4db0b28823b02bb25e 1134 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 304 334 3.6E-18 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_1334 a2e41c79a1eefd4db0b28823b02bb25e 1134 SUPERFAMILY SSF56935 209 1134 1.28E-84 T 11-10-2018 TF3313_1334 a2e41c79a1eefd4db0b28823b02bb25e 1134 Pfam PF07660 Secretin and TonB N terminus short domain 68 118 2.0E-9 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TF3313_1620 efa549f98fb638d39e9bf397d269b2b3 537 Pfam PF13598 Domain of unknown function (DUF4139) 216 531 3.0E-60 T 11-10-2018 IPR037291 Domain of unknown function DUF4139 TF3313_1620 efa549f98fb638d39e9bf397d269b2b3 537 TIGRFAM TIGR02231 TIGR02231: conserved hypothetical protein 31 535 7.7E-75 T 11-10-2018 IPR011935 Conserved hypothetical protein CHP02231 TF3313_1620 efa549f98fb638d39e9bf397d269b2b3 537 Pfam PF13600 N-terminal domain of unknown function (DUF4140) 35 133 7.2E-13 T 11-10-2018 IPR025554 Domain of unknown function DUF4140 TF3313_0502 cdb1f6c146c8c1d2f1698fece6c3475f 437 SUPERFAMILY SSF51735 1 193 4.12E-59 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_0502 cdb1f6c146c8c1d2f1698fece6c3475f 437 PIRSF PIRSF500134 1 437 1.8E-196 T 11-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 TF3313_0502 cdb1f6c146c8c1d2f1698fece6c3475f 437 PIRSF PIRSF000124 1 437 4.1E-152 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 TF3313_0502 cdb1f6c146c8c1d2f1698fece6c3475f 437 Gene3D G3DSA:1.20.5.100 203 233 3.6E-19 T 11-10-2018 TF3313_0502 cdb1f6c146c8c1d2f1698fece6c3475f 437 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 418 3.1E-140 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 TF3313_0502 cdb1f6c146c8c1d2f1698fece6c3475f 437 Gene3D G3DSA:3.40.50.720 235 437 1.4E-79 T 11-10-2018 TF3313_0502 cdb1f6c146c8c1d2f1698fece6c3475f 437 SUPERFAMILY SSF52413 308 432 3.14E-37 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 TF3313_0502 cdb1f6c146c8c1d2f1698fece6c3475f 437 SMART SM00984 320 422 5.7E-46 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TF3313_0502 cdb1f6c146c8c1d2f1698fece6c3475f 437 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 421 5.9E-31 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TF3313_0502 cdb1f6c146c8c1d2f1698fece6c3475f 437 SUPERFAMILY SSF48179 205 301 1.02E-33 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TF3313_0502 cdb1f6c146c8c1d2f1698fece6c3475f 437 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 187 2.2E-67 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TF3313_0502 cdb1f6c146c8c1d2f1698fece6c3475f 437 Gene3D G3DSA:3.40.50.720 1 202 6.5E-81 T 11-10-2018 TF3313_0502 cdb1f6c146c8c1d2f1698fece6c3475f 437 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 205 296 1.2E-39 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TF3313_1410 5353bb8c82d85b0e84554d46ade91a67 715 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 17 191 1.4E-31 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TF3313_1410 5353bb8c82d85b0e84554d46ade91a67 715 Pfam PF03764 Elongation factor G, domain IV 492 612 9.6E-40 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 TF3313_1410 5353bb8c82d85b0e84554d46ade91a67 715 SUPERFAMILY SSF50447 277 417 3.53E-35 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TF3313_1410 5353bb8c82d85b0e84554d46ade91a67 715 SMART SM00838 615 703 9.8E-48 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like TF3313_1410 5353bb8c82d85b0e84554d46ade91a67 715 SUPERFAMILY SSF52540 16 294 3.22E-103 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1410 5353bb8c82d85b0e84554d46ade91a67 715 Gene3D G3DSA:3.30.70.240 619 690 1.1E-80 T 11-10-2018 TF3313_1410 5353bb8c82d85b0e84554d46ade91a67 715 Hamap MF_00054_B Elongation factor G [fusA]. 14 707 108.875 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TF3313_1410 5353bb8c82d85b0e84554d46ade91a67 715 SUPERFAMILY SSF54980 415 492 7.55E-25 T 11-10-2018 IPR035647 EF-G domain III/V-like TF3313_1410 5353bb8c82d85b0e84554d46ade91a67 715 Gene3D G3DSA:3.30.70.870 419 492 5.7E-31 T 11-10-2018 TF3313_1410 5353bb8c82d85b0e84554d46ade91a67 715 Pfam PF03144 Elongation factor Tu domain 2 337 404 4.1E-14 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 TF3313_1410 5353bb8c82d85b0e84554d46ade91a67 715 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 59 74 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site TF3313_1410 5353bb8c82d85b0e84554d46ade91a67 715 Pfam PF14492 Elongation Factor G, domain II 417 489 7.2E-33 T 11-10-2018 TF3313_1410 5353bb8c82d85b0e84554d46ade91a67 715 Gene3D G3DSA:2.40.30.10 304 418 4.3E-42 T 11-10-2018 TF3313_1410 5353bb8c82d85b0e84554d46ade91a67 715 Gene3D G3DSA:3.30.230.10 497 703 1.1E-80 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TF3313_1410 5353bb8c82d85b0e84554d46ade91a67 715 SUPERFAMILY SSF54211 496 614 3.29E-36 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TF3313_1410 5353bb8c82d85b0e84554d46ade91a67 715 PRINTS PR00315 GTP-binding elongation factor signature 66 74 3.3E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TF3313_1410 5353bb8c82d85b0e84554d46ade91a67 715 PRINTS PR00315 GTP-binding elongation factor signature 106 117 3.3E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TF3313_1410 5353bb8c82d85b0e84554d46ade91a67 715 PRINTS PR00315 GTP-binding elongation factor signature 90 100 3.3E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TF3313_1410 5353bb8c82d85b0e84554d46ade91a67 715 PRINTS PR00315 GTP-binding elongation factor signature 142 151 3.3E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TF3313_1410 5353bb8c82d85b0e84554d46ade91a67 715 PRINTS PR00315 GTP-binding elongation factor signature 20 33 3.3E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TF3313_1410 5353bb8c82d85b0e84554d46ade91a67 715 Gene3D G3DSA:3.40.50.300 11 303 6.9E-109 T 11-10-2018 TF3313_1410 5353bb8c82d85b0e84554d46ade91a67 715 Pfam PF00679 Elongation factor G C-terminus 615 702 2.3E-30 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like TF3313_1410 5353bb8c82d85b0e84554d46ade91a67 715 SUPERFAMILY SSF54980 618 707 2.69E-29 T 11-10-2018 IPR035647 EF-G domain III/V-like TF3313_1410 5353bb8c82d85b0e84554d46ade91a67 715 SMART SM00889 493 613 5.4E-53 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 TF3313_1410 5353bb8c82d85b0e84554d46ade91a67 715 Pfam PF00009 Elongation factor Tu GTP binding domain 16 294 3.4E-63 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TF3313_1410 5353bb8c82d85b0e84554d46ade91a67 715 TIGRFAM TIGR00484 EF-G: translation elongation factor G 15 706 0.0 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TF3313_0371 49d2ddc3125f901af29fdbb6eb69c668 649 SUPERFAMILY SSF54001 261 394 8.83E-17 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TF3313_0371 49d2ddc3125f901af29fdbb6eb69c668 649 Pfam PF12970 Domain of Unknown Function with PDB structure (DUF3858) 569 646 6.2E-7 T 11-10-2018 IPR024544 Domain of unknown function DUF3858 TF3313_0371 49d2ddc3125f901af29fdbb6eb69c668 649 Gene3D G3DSA:3.10.620.30 265 402 8.9E-30 T 11-10-2018 TF3313_0371 49d2ddc3125f901af29fdbb6eb69c668 649 Gene3D G3DSA:2.60.120.1130 541 648 4.6E-7 T 11-10-2018 TF3313_0371 49d2ddc3125f901af29fdbb6eb69c668 649 Pfam PF01841 Transglutaminase-like superfamily 282 392 6.1E-10 T 11-10-2018 IPR002931 Transglutaminase-like TF3313_0371 49d2ddc3125f901af29fdbb6eb69c668 649 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 54 231 9.5E-47 T 11-10-2018 IPR024618 Domain of unknown function DUF3857 TF3313_0371 49d2ddc3125f901af29fdbb6eb69c668 649 Gene3D G3DSA:2.60.40.3140 46 253 3.5E-7 T 11-10-2018 TF3313_0926 c83fbc6c1b9ab4fbeb9e5f86da74945c 402 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 288 377 2.6E-10 T 11-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain TF3313_0926 c83fbc6c1b9ab4fbeb9e5f86da74945c 402 Gene3D G3DSA:3.60.21.10 1 274 4.5E-74 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like TF3313_0926 c83fbc6c1b9ab4fbeb9e5f86da74945c 402 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 7 253 1.5E-51 T 11-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 TF3313_0926 c83fbc6c1b9ab4fbeb9e5f86da74945c 402 SUPERFAMILY SSF56300 7 340 5.7E-48 T 11-10-2018 TF3313_0926 c83fbc6c1b9ab4fbeb9e5f86da74945c 402 Pfam PF00149 Calcineurin-like phosphoesterase 7 226 8.2E-14 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TF3313_2281 a0928a95c82e6446816661f83cebfb29 182 Pfam PF07659 Domain of Unknown Function (DUF1599) 22 82 9.1E-26 T 11-10-2018 IPR011630 Clostridium phage phiCTP1, Gp74 TF3313_2281 a0928a95c82e6446816661f83cebfb29 182 Pfam PF07659 Domain of Unknown Function (DUF1599) 115 176 4.3E-25 T 11-10-2018 IPR011630 Clostridium phage phiCTP1, Gp74 TF3313_2661 091c5f47ba21b1f381efb50e466e28d0 393 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 39 52 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TF3313_2661 091c5f47ba21b1f381efb50e466e28d0 393 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 228 237 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site TF3313_2661 091c5f47ba21b1f381efb50e466e28d0 393 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 356 373 6.5E-9 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TF3313_2661 091c5f47ba21b1f381efb50e466e28d0 393 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 373 393 6.5E-9 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TF3313_2661 091c5f47ba21b1f381efb50e466e28d0 393 SUPERFAMILY SSF52540 14 259 2.27E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2661 091c5f47ba21b1f381efb50e466e28d0 393 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 101 116 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TF3313_2661 091c5f47ba21b1f381efb50e466e28d0 393 SUPERFAMILY SSF46689 347 393 3.58E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TF3313_2661 091c5f47ba21b1f381efb50e466e28d0 393 SMART SM00382 35 178 4.3E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_2661 091c5f47ba21b1f381efb50e466e28d0 393 Pfam PF02954 Bacterial regulatory protein, Fis family 350 390 1.5E-14 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TF3313_2661 091c5f47ba21b1f381efb50e466e28d0 393 Pfam PF00158 Sigma-54 interaction domain 15 181 3.7E-66 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TF3313_2661 091c5f47ba21b1f381efb50e466e28d0 393 Gene3D G3DSA:1.10.8.60 186 253 1.4E-20 T 11-10-2018 TF3313_2661 091c5f47ba21b1f381efb50e466e28d0 393 Gene3D G3DSA:3.40.50.300 3 185 2.2E-60 T 11-10-2018 TF3313_2661 091c5f47ba21b1f381efb50e466e28d0 393 Gene3D G3DSA:1.10.10.60 336 393 2.2E-16 T 11-10-2018 TF3313_1387 36ba77e2c7fd8364ddfd9a16803b7b15 502 Gene3D G3DSA:1.25.40.390 18 502 1.6E-90 T 11-10-2018 TF3313_1387 36ba77e2c7fd8364ddfd9a16803b7b15 502 SUPERFAMILY SSF48452 16 499 1.52E-93 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1387 36ba77e2c7fd8364ddfd9a16803b7b15 502 Pfam PF12771 Starch-binding associating with outer membrane 1 502 1.1E-97 T 11-10-2018 TF3313_0154 26d4b55691564ef95958565e7e8eaaac 1135 Pfam PF13715 CarboxypepD_reg-like domain 119 200 6.2E-13 T 11-10-2018 TF3313_0154 26d4b55691564ef95958565e7e8eaaac 1135 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 285 315 2.2E-16 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_0154 26d4b55691564ef95958565e7e8eaaac 1135 SUPERFAMILY SSF49464 117 198 6.28E-14 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_0154 26d4b55691564ef95958565e7e8eaaac 1135 Gene3D G3DSA:2.40.170.20 315 1101 5.2E-13 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_0154 26d4b55691564ef95958565e7e8eaaac 1135 Pfam PF07715 TonB-dependent Receptor Plug Domain 210 309 3.1E-13 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_0154 26d4b55691564ef95958565e7e8eaaac 1135 Gene3D G3DSA:2.170.130.10 186 314 8.4E-22 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_0154 26d4b55691564ef95958565e7e8eaaac 1135 SMART SM00965 57 106 0.0034 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TF3313_0154 26d4b55691564ef95958565e7e8eaaac 1135 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 118 1135 1.6E-151 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_0154 26d4b55691564ef95958565e7e8eaaac 1135 SUPERFAMILY SSF56935 197 973 1.24E-53 T 11-10-2018 TF3313_2907 49e3d3b7326ea0797ba56d0a27780883 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 6.6E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_2907 49e3d3b7326ea0797ba56d0a27780883 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 6.6E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_2907 49e3d3b7326ea0797ba56d0a27780883 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 6.6E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_2907 49e3d3b7326ea0797ba56d0a27780883 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 206 6.6E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_2907 49e3d3b7326ea0797ba56d0a27780883 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 229 249 6.6E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_2907 49e3d3b7326ea0797ba56d0a27780883 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 6.6E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_2907 49e3d3b7326ea0797ba56d0a27780883 270 SUPERFAMILY SSF51735 8 265 1.34E-73 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_2907 49e3d3b7326ea0797ba56d0a27780883 270 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 265 5.7E-50 T 11-10-2018 TF3313_2907 49e3d3b7326ea0797ba56d0a27780883 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 2.9E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_2907 49e3d3b7326ea0797ba56d0a27780883 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 2.9E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_2907 49e3d3b7326ea0797ba56d0a27780883 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 2.9E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_2907 49e3d3b7326ea0797ba56d0a27780883 270 Gene3D G3DSA:3.40.50.720 2 270 1.3E-75 T 11-10-2018 TF3313_2105 6b1d8ad2a287d97a2353b4caa59a53fd 186 Pfam PF01944 Stage II sporulation protein M 18 182 2.3E-15 T 11-10-2018 IPR002798 Stage II sporulation protein M-like TF3313_1542 c8b99643949a8ec79790f3b910685ea5 565 Pfam PF00756 Putative esterase 198 322 4.6E-6 T 11-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 TF3313_1542 c8b99643949a8ec79790f3b910685ea5 565 SUPERFAMILY SSF53474 196 398 1.51E-22 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TF3313_1542 c8b99643949a8ec79790f3b910685ea5 565 Gene3D G3DSA:3.40.50.1820 175 399 3.2E-26 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TF3313_0018 6611b4d39c21a3ba396e297f88483752 418 SUPERFAMILY SSF49464 33 119 1.57E-13 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_0018 6611b4d39c21a3ba396e297f88483752 418 Pfam PF13715 CarboxypepD_reg-like domain 35 121 4.3E-14 T 11-10-2018 TF3313_0018 6611b4d39c21a3ba396e297f88483752 418 Gene3D G3DSA:2.60.40.1120 34 111 6.5E-6 T 11-10-2018 TF3313_2220 22709b3fade03e4577d1dfd98003fcb9 394 Gene3D G3DSA:1.20.1090.10 186 393 2.2E-46 T 11-10-2018 TF3313_2220 22709b3fade03e4577d1dfd98003fcb9 394 Gene3D G3DSA:3.40.50.1970 1 185 7.1E-49 T 11-10-2018 TF3313_2220 22709b3fade03e4577d1dfd98003fcb9 394 SUPERFAMILY SSF56796 2 390 8.11E-99 T 11-10-2018 TF3313_2220 22709b3fade03e4577d1dfd98003fcb9 394 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 385 7.9E-91 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 TF3313_0906 87c143a1daf97d1719dd34c652978b1a 1148 SMART SM00965 66 118 1.2E-5 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TF3313_0906 87c143a1daf97d1719dd34c652978b1a 1148 Gene3D G3DSA:2.170.130.10 205 338 4.5E-21 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_0906 87c143a1daf97d1719dd34c652978b1a 1148 Gene3D G3DSA:2.60.40.1120 133 204 1.9E-6 T 11-10-2018 TF3313_0906 87c143a1daf97d1719dd34c652978b1a 1148 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 133 1145 1.4E-271 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_0906 87c143a1daf97d1719dd34c652978b1a 1148 Pfam PF13715 CarboxypepD_reg-like domain 134 216 8.4E-16 T 11-10-2018 TF3313_0906 87c143a1daf97d1719dd34c652978b1a 1148 SUPERFAMILY SSF49464 132 214 1.96E-14 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_0906 87c143a1daf97d1719dd34c652978b1a 1148 Pfam PF00593 TonB dependent receptor 593 1144 1.1E-26 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_0906 87c143a1daf97d1719dd34c652978b1a 1148 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 310 339 3.0E-14 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_0906 87c143a1daf97d1719dd34c652978b1a 1148 SUPERFAMILY SSF56935 213 1145 1.47E-65 T 11-10-2018 TF3313_0906 87c143a1daf97d1719dd34c652978b1a 1148 Pfam PF07715 TonB-dependent Receptor Plug Domain 225 333 4.9E-16 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_1354 d67c1ee10a863d59c4dab826c631c519 105 Gene3D G3DSA:3.30.300.130 7 85 2.0E-18 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily TF3313_1354 d67c1ee10a863d59c4dab826c631c519 105 Pfam PF01106 NifU-like domain 13 79 1.2E-17 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 TF3313_1354 d67c1ee10a863d59c4dab826c631c519 105 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 19 79 3.0E-15 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 TF3313_1354 d67c1ee10a863d59c4dab826c631c519 105 SUPERFAMILY SSF117916 11 75 3.49E-17 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily TF3313_1661 791ea8c1be24e5ba0d6051bae7f7b6e2 415 Gene3D G3DSA:3.90.1260.10 189 414 2.6E-51 T 11-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 TF3313_1661 791ea8c1be24e5ba0d6051bae7f7b6e2 415 Gene3D G3DSA:3.40.50.620 8 188 2.9E-45 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_1661 791ea8c1be24e5ba0d6051bae7f7b6e2 415 SUPERFAMILY SSF69864 187 407 1.31E-58 T 11-10-2018 TF3313_1661 791ea8c1be24e5ba0d6051bae7f7b6e2 415 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 22 30 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 TF3313_1661 791ea8c1be24e5ba0d6051bae7f7b6e2 415 SUPERFAMILY SSF52402 16 215 1.12E-35 T 11-10-2018 TF3313_1661 791ea8c1be24e5ba0d6051bae7f7b6e2 415 Pfam PF00764 Arginosuccinate synthase 20 404 5.1E-73 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 TF3313_0820 3eb8130bb3d7c33364afcde33033d593 180 Gene3D G3DSA:1.10.10.10 94 177 3.5E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_0820 3eb8130bb3d7c33364afcde33033d593 180 Gene3D G3DSA:1.10.1740.10 4 87 5.0E-12 T 11-10-2018 TF3313_0820 3eb8130bb3d7c33364afcde33033d593 180 SUPERFAMILY SSF88659 113 175 1.81E-11 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TF3313_0820 3eb8130bb3d7c33364afcde33033d593 180 Pfam PF04542 Sigma-70 region 2 23 91 1.5E-8 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_0820 3eb8130bb3d7c33364afcde33033d593 180 SUPERFAMILY SSF88946 5 108 3.77E-13 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_0820 3eb8130bb3d7c33364afcde33033d593 180 Pfam PF08281 Sigma-70, region 4 118 170 3.9E-10 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TF3313_0820 3eb8130bb3d7c33364afcde33033d593 180 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 173 2.0E-17 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TF3313_2421 ff83030a568e5993c4454674b9410288 294 Gene3D G3DSA:1.20.1540.10 11 221 1.0E-24 T 11-10-2018 IPR035952 Rhomboid-like superfamily TF3313_2421 ff83030a568e5993c4454674b9410288 294 SUPERFAMILY SSF144091 17 213 3.27E-32 T 11-10-2018 TF3313_2421 ff83030a568e5993c4454674b9410288 294 Pfam PF01694 Rhomboid family 64 213 4.4E-25 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 TF3313_1279 39c3b5a3532d05954de41caa7b2d0c17 1156 Gene3D G3DSA:2.60.40.1120 127 193 3.5E-6 T 11-10-2018 TF3313_1279 39c3b5a3532d05954de41caa7b2d0c17 1156 SMART SM00965 61 112 0.001 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TF3313_1279 39c3b5a3532d05954de41caa7b2d0c17 1156 Gene3D G3DSA:2.170.130.10 195 344 1.3E-30 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_1279 39c3b5a3532d05954de41caa7b2d0c17 1156 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 127 1156 3.9E-254 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_1279 39c3b5a3532d05954de41caa7b2d0c17 1156 Pfam PF07660 Secretin and TonB N terminus short domain 61 112 1.1E-7 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TF3313_1279 39c3b5a3532d05954de41caa7b2d0c17 1156 Pfam PF00593 TonB dependent receptor 581 1154 3.1E-30 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_1279 39c3b5a3532d05954de41caa7b2d0c17 1156 SUPERFAMILY SSF49464 126 205 5.76E-18 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_1279 39c3b5a3532d05954de41caa7b2d0c17 1156 Pfam PF07715 TonB-dependent Receptor Plug Domain 214 339 2.6E-21 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_1279 39c3b5a3532d05954de41caa7b2d0c17 1156 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 315 345 5.2E-18 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_1279 39c3b5a3532d05954de41caa7b2d0c17 1156 SUPERFAMILY SSF56935 203 1156 5.49E-95 T 11-10-2018 TF3313_1279 39c3b5a3532d05954de41caa7b2d0c17 1156 Pfam PF13715 CarboxypepD_reg-like domain 127 207 1.6E-16 T 11-10-2018 TF3313_1279 39c3b5a3532d05954de41caa7b2d0c17 1156 Gene3D G3DSA:2.40.170.20 445 940 7.5E-22 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_0985 474bbbdcc20d552cad6fcd9295ded9c7 605 Pfam PF00733 Asparagine synthase 272 598 9.5E-57 T 11-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 TF3313_0985 474bbbdcc20d552cad6fcd9295ded9c7 605 PIRSF PIRSF001589 1 605 6.2E-118 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 TF3313_0985 474bbbdcc20d552cad6fcd9295ded9c7 605 Gene3D G3DSA:3.60.20.10 3 217 8.5E-59 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TF3313_0985 474bbbdcc20d552cad6fcd9295ded9c7 605 SUPERFAMILY SSF56235 1 253 2.49E-58 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TF3313_0985 474bbbdcc20d552cad6fcd9295ded9c7 605 SUPERFAMILY SSF52402 258 596 8.18E-51 T 11-10-2018 TF3313_0985 474bbbdcc20d552cad6fcd9295ded9c7 605 Pfam PF13537 Glutamine amidotransferase domain 75 195 2.9E-45 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain TF3313_0985 474bbbdcc20d552cad6fcd9295ded9c7 605 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 538 1.2E-118 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 TF3313_0555 88ca0205bf9f546ecc5cf44c8bc0eb12 231 Gene3D G3DSA:1.10.260.40 4 69 2.1E-9 T 11-10-2018 TF3313_0555 88ca0205bf9f546ecc5cf44c8bc0eb12 231 SUPERFAMILY SSF51306 113 224 7.32E-7 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily TF3313_0555 88ca0205bf9f546ecc5cf44c8bc0eb12 231 SMART SM00530 7 62 3.3E-5 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TF3313_0555 88ca0205bf9f546ecc5cf44c8bc0eb12 231 Gene3D G3DSA:2.10.109.10 91 230 7.3E-7 T 11-10-2018 TF3313_0555 88ca0205bf9f546ecc5cf44c8bc0eb12 231 SUPERFAMILY SSF47413 4 63 3.0E-8 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TF3313_0082 33d6a179a119a991d8e71c9b433d0898 486 SUPERFAMILY SSF102114 92 433 3.01E-33 T 11-10-2018 TF3313_0082 33d6a179a119a991d8e71c9b433d0898 486 TIGRFAM TIGR04148 GG_samocin_CFB: radical SAM peptide maturase, GG-Bacteroidales family 77 483 2.2E-151 T 11-10-2018 IPR026407 Radical SAM peptide maturase, GG-Bacteroidales family TF3313_0082 33d6a179a119a991d8e71c9b433d0898 486 Pfam PF04055 Radical SAM superfamily 96 264 8.3E-11 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TF3313_0082 33d6a179a119a991d8e71c9b433d0898 486 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 97 108 - T 11-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TF3313_0082 33d6a179a119a991d8e71c9b433d0898 486 Gene3D G3DSA:3.20.20.70 89 468 3.0E-53 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_0082 33d6a179a119a991d8e71c9b433d0898 486 Pfam PF13353 4Fe-4S single cluster domain 98 228 1.2E-6 T 11-10-2018 TF3313_0618 6a88dd45323d6585c8f6ce8613b6b7e3 437 SUPERFAMILY SSF102114 144 367 2.88E-46 T 11-10-2018 TF3313_0618 6a88dd45323d6585c8f6ce8613b6b7e3 437 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 TF3313_0618 6a88dd45323d6585c8f6ce8613b6b7e3 437 Pfam PF00919 Uncharacterized protein family UPF0004 12 106 1.2E-23 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 TF3313_0618 6a88dd45323d6585c8f6ce8613b6b7e3 437 Pfam PF04055 Radical SAM superfamily 153 321 4.6E-20 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TF3313_0618 6a88dd45323d6585c8f6ce8613b6b7e3 437 Gene3D G3DSA:3.40.50.12160 11 138 6.9E-21 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily TF3313_0618 6a88dd45323d6585c8f6ce8613b6b7e3 437 SMART SM00729 147 363 1.4E-34 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TF3313_0618 6a88dd45323d6585c8f6ce8613b6b7e3 437 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 16 420 6.3E-122 T 11-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 TF3313_0618 6a88dd45323d6585c8f6ce8613b6b7e3 437 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 15 425 2.8E-116 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 TF3313_0618 6a88dd45323d6585c8f6ce8613b6b7e3 437 Gene3D G3DSA:3.80.30.20 144 376 8.0E-72 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TF3313_0350 c3a80b6421535be95788353f24720eaf 147 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 7 144 5.8E-49 T 11-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 TF3313_0350 c3a80b6421535be95788353f24720eaf 147 Gene3D G3DSA:3.40.1400.10 1 145 1.5E-56 T 11-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 TF3313_0350 c3a80b6421535be95788353f24720eaf 147 SUPERFAMILY SSF89623 5 144 8.11E-51 T 11-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 TF3313_0350 c3a80b6421535be95788353f24720eaf 147 PIRSF PIRSF005384 4 146 3.0E-52 T 11-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 TF3313_0350 c3a80b6421535be95788353f24720eaf 147 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 6 145 1.5E-46 T 11-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 TF3313_0350 c3a80b6421535be95788353f24720eaf 147 Pfam PF02502 Ribose/Galactose Isomerase 6 143 3.3E-53 T 11-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 TF3313_0746 65e8f75e4ef0abd96a1603a1aee4b783 209 Pfam PF04961 Formiminotransferase-cyclodeaminase 8 187 2.2E-67 T 11-10-2018 IPR007044 Cyclodeaminase/cyclohydrolase GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 TF3313_0746 65e8f75e4ef0abd96a1603a1aee4b783 209 SUPERFAMILY SSF101262 3 206 1.14E-60 T 11-10-2018 IPR036178 Formimidoyltransferase-cyclodeaminase-like superfamily GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 TF3313_0746 65e8f75e4ef0abd96a1603a1aee4b783 209 Gene3D G3DSA:1.20.120.680 7 208 3.3E-68 T 11-10-2018 IPR036178 Formimidoyltransferase-cyclodeaminase-like superfamily GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 TF3313_1447 d240edea95adfd4b3271f193d0a877e6 1216 Pfam PF17517 IgGFc binding protein 142 488 1.9E-32 T 11-10-2018 IPR035234 IgGFc-binding protein, N-terminal TF3313_1447 d240edea95adfd4b3271f193d0a877e6 1216 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 1165 1215 9.5E-6 T 11-10-2018 IPR026444 Secretion system C-terminal sorting domain TF3313_1447 d240edea95adfd4b3271f193d0a877e6 1216 SMART SM00710 855 881 1600.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat TF3313_1447 d240edea95adfd4b3271f193d0a877e6 1216 SMART SM00710 886 906 9000.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat TF3313_1447 d240edea95adfd4b3271f193d0a877e6 1216 SMART SM00710 824 845 25.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat TF3313_1447 d240edea95adfd4b3271f193d0a877e6 1216 SMART SM00710 793 818 1900.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat TF3313_1447 d240edea95adfd4b3271f193d0a877e6 1216 SUPERFAMILY SSF51126 686 1044 4.85E-26 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor TF3313_0535 7b0363be2918379ffc6fbce5066c87b7 212 Pfam PF01026 TatD related DNase 33 171 4.1E-28 T 11-10-2018 IPR001130 TatD family GO:0016788 TF3313_0535 7b0363be2918379ffc6fbce5066c87b7 212 PIRSF PIRSF005902 26 187 1.5E-26 T 11-10-2018 IPR001130 TatD family GO:0016788 TF3313_0535 7b0363be2918379ffc6fbce5066c87b7 212 PIRSF PIRSF005902 1 36 22.0 T 11-10-2018 IPR001130 TatD family GO:0016788 TF3313_0535 7b0363be2918379ffc6fbce5066c87b7 212 Gene3D G3DSA:3.20.20.140 2 199 1.1E-32 T 11-10-2018 TF3313_0535 7b0363be2918379ffc6fbce5066c87b7 212 SUPERFAMILY SSF51556 3 198 1.08E-36 T 11-10-2018 IPR032466 Metal-dependent hydrolase TF3313_2311 f6c4b528565712034e587ca05eae2cc4 448 SUPERFAMILY SSF51556 59 377 4.74E-86 T 11-10-2018 IPR032466 Metal-dependent hydrolase TF3313_2311 f6c4b528565712034e587ca05eae2cc4 448 Gene3D G3DSA:3.20.20.140 60 416 8.4E-138 T 11-10-2018 TF3313_2311 f6c4b528565712034e587ca05eae2cc4 448 Gene3D G3DSA:2.30.40.10 5 431 8.4E-138 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TF3313_2311 f6c4b528565712034e587ca05eae2cc4 448 ProSitePatterns PS00483 Dihydroorotase signature 2. 312 323 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TF3313_2311 f6c4b528565712034e587ca05eae2cc4 448 SUPERFAMILY SSF51338 1 439 4.03E-29 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TF3313_2311 f6c4b528565712034e587ca05eae2cc4 448 Pfam PF01979 Amidohydrolase family 56 428 9.6E-22 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 TF3313_2147 7565fa288bb482729575a0049802cab5 165 Gene3D G3DSA:1.10.530.10 3 162 1.7E-33 T 11-10-2018 TF3313_2147 7565fa288bb482729575a0049802cab5 165 SMART SM00047 3 165 0.0019 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 TF3313_2147 7565fa288bb482729575a0049802cab5 165 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 13 162 1.6E-18 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 TF3313_2665 89b4e0855a740e75f76bafe835b3908e 173 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 7 68 2.5E-15 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TF3313_2665 89b4e0855a740e75f76bafe835b3908e 173 Pfam PF01467 Cytidylyltransferase-like 9 102 3.1E-18 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TF3313_2665 89b4e0855a740e75f76bafe835b3908e 173 SUPERFAMILY SSF52374 5 130 3.75E-29 T 11-10-2018 TF3313_2665 89b4e0855a740e75f76bafe835b3908e 173 Gene3D G3DSA:3.40.50.620 5 132 6.2E-36 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_0935 0680dec258761e21381fe5de25e7c7a8 428 Pfam PF00860 Permease family 18 385 1.8E-89 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 TF3313_0935 0680dec258761e21381fe5de25e7c7a8 428 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 333 353 - T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 TF3313_0935 0680dec258761e21381fe5de25e7c7a8 428 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 11 406 1.9E-106 T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 TF3313_0494 e5196a45b8a3970d2fd3c6275b732174 74 TIGRFAM TIGR03070 couple_hipB: transcriptional regulator, y4mF family 6 62 1.0E-25 T 11-10-2018 IPR017507 Transcription regulator, HipB-like TF3313_0494 e5196a45b8a3970d2fd3c6275b732174 74 SUPERFAMILY SSF47413 2 61 5.63E-12 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TF3313_0494 e5196a45b8a3970d2fd3c6275b732174 74 Pfam PF01381 Helix-turn-helix 11 59 3.3E-9 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TF3313_0494 e5196a45b8a3970d2fd3c6275b732174 74 Gene3D G3DSA:1.10.260.40 2 63 2.9E-11 T 11-10-2018 TF3313_0494 e5196a45b8a3970d2fd3c6275b732174 74 SMART SM00530 10 65 3.1E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TF3313_0196 4ce43abd6470ea1e427287a474bed178 420 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 3 419 39.486 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_0196 4ce43abd6470ea1e427287a474bed178 420 SUPERFAMILY SSF53748 2 418 5.3E-144 T 11-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_0196 4ce43abd6470ea1e427287a474bed178 420 PIRSF PIRSF000724 1 420 1.6E-151 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_0196 4ce43abd6470ea1e427287a474bed178 420 Pfam PF00162 Phosphoglycerate kinase 5 409 7.7E-150 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_0196 4ce43abd6470ea1e427287a474bed178 420 PRINTS PR00477 Phosphoglycerate kinase family signature 336 361 1.8E-77 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_0196 4ce43abd6470ea1e427287a474bed178 420 PRINTS PR00477 Phosphoglycerate kinase family signature 214 233 1.8E-77 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_0196 4ce43abd6470ea1e427287a474bed178 420 PRINTS PR00477 Phosphoglycerate kinase family signature 8 24 1.8E-77 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_0196 4ce43abd6470ea1e427287a474bed178 420 PRINTS PR00477 Phosphoglycerate kinase family signature 191 213 1.8E-77 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_0196 4ce43abd6470ea1e427287a474bed178 420 PRINTS PR00477 Phosphoglycerate kinase family signature 372 383 1.8E-77 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_0196 4ce43abd6470ea1e427287a474bed178 420 PRINTS PR00477 Phosphoglycerate kinase family signature 395 412 1.8E-77 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_0196 4ce43abd6470ea1e427287a474bed178 420 PRINTS PR00477 Phosphoglycerate kinase family signature 158 180 1.8E-77 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_0196 4ce43abd6470ea1e427287a474bed178 420 PRINTS PR00477 Phosphoglycerate kinase family signature 30 52 1.8E-77 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_0196 4ce43abd6470ea1e427287a474bed178 420 Gene3D G3DSA:3.40.50.1260 205 419 1.4E-79 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_0196 4ce43abd6470ea1e427287a474bed178 420 Gene3D G3DSA:3.40.50.1260 1 186 5.2E-64 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TF3313_1647 f14ef19cf7b3ab3872f602e532d2f447 631 SUPERFAMILY SSF48452 19 631 3.16E-80 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1647 f14ef19cf7b3ab3872f602e532d2f447 631 Pfam PF14322 Starch-binding associating with outer membrane 23 210 2.5E-18 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_1647 f14ef19cf7b3ab3872f602e532d2f447 631 Gene3D G3DSA:1.25.40.390 20 627 1.9E-90 T 11-10-2018 TF3313_1647 f14ef19cf7b3ab3872f602e532d2f447 631 Pfam PF07980 SusD family 348 631 3.7E-33 T 11-10-2018 IPR012944 RagB/SusD domain TF3313_2001 494031108be404ae2f9886acef680ab9 297 Gene3D G3DSA:2.40.230.10 58 292 3.7E-49 T 11-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 TF3313_2001 494031108be404ae2f9886acef680ab9 297 PRINTS PR01486 Bacterial phospholipase A1 protein signature 106 122 3.2E-13 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 TF3313_2001 494031108be404ae2f9886acef680ab9 297 PRINTS PR01486 Bacterial phospholipase A1 protein signature 170 188 3.2E-13 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 TF3313_2001 494031108be404ae2f9886acef680ab9 297 PRINTS PR01486 Bacterial phospholipase A1 protein signature 127 146 3.2E-13 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 TF3313_2001 494031108be404ae2f9886acef680ab9 297 PRINTS PR01486 Bacterial phospholipase A1 protein signature 84 101 3.2E-13 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 TF3313_2001 494031108be404ae2f9886acef680ab9 297 PRINTS PR01486 Bacterial phospholipase A1 protein signature 203 221 3.2E-13 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 TF3313_2001 494031108be404ae2f9886acef680ab9 297 PRINTS PR01486 Bacterial phospholipase A1 protein signature 262 282 3.2E-13 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 TF3313_2001 494031108be404ae2f9886acef680ab9 297 SUPERFAMILY SSF56931 54 290 3.27E-52 T 11-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 TF3313_2001 494031108be404ae2f9886acef680ab9 297 Pfam PF02253 Phospholipase A1 84 288 4.7E-44 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 TF3313_0699 c98f3c97501bf46f433797867569bf2e 1131 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 311 341 9.5E-19 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_0699 c98f3c97501bf46f433797867569bf2e 1131 SUPERFAMILY SSF49464 139 219 9.55E-16 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_0699 c98f3c97501bf46f433797867569bf2e 1131 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 139 1131 1.7E-292 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_0699 c98f3c97501bf46f433797867569bf2e 1131 Gene3D G3DSA:2.170.130.10 230 343 1.2E-22 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_0699 c98f3c97501bf46f433797867569bf2e 1131 Pfam PF13715 CarboxypepD_reg-like domain 140 221 1.9E-14 T 11-10-2018 TF3313_0699 c98f3c97501bf46f433797867569bf2e 1131 SUPERFAMILY SSF56935 217 1131 3.05E-94 T 11-10-2018 TF3313_0699 c98f3c97501bf46f433797867569bf2e 1131 Gene3D G3DSA:2.60.40.1120 140 224 5.3E-5 T 11-10-2018 TF3313_0699 c98f3c97501bf46f433797867569bf2e 1131 Pfam PF07715 TonB-dependent Receptor Plug Domain 230 335 1.4E-18 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_0699 c98f3c97501bf46f433797867569bf2e 1131 SMART SM00965 70 122 2.8E-6 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TF3313_0699 c98f3c97501bf46f433797867569bf2e 1131 Pfam PF00593 TonB dependent receptor 538 1130 6.8E-41 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_2532 f70aeb8ce422507e3ffe3507a55f8fc0 431 Gene3D G3DSA:3.40.50.12160 4 135 1.1E-32 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily TF3313_2532 f70aeb8ce422507e3ffe3507a55f8fc0 431 SMART SM00729 136 355 1.5E-48 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TF3313_2532 f70aeb8ce422507e3ffe3507a55f8fc0 431 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 5 427 2.9E-130 T 11-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 TF3313_2532 f70aeb8ce422507e3ffe3507a55f8fc0 431 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 140 160 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 TF3313_2532 f70aeb8ce422507e3ffe3507a55f8fc0 431 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 5 427 2.3E-112 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 TF3313_2532 f70aeb8ce422507e3ffe3507a55f8fc0 431 Pfam PF04055 Radical SAM superfamily 142 311 5.2E-27 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TF3313_2532 f70aeb8ce422507e3ffe3507a55f8fc0 431 SUPERFAMILY SSF102114 114 361 2.75E-55 T 11-10-2018 TF3313_2532 f70aeb8ce422507e3ffe3507a55f8fc0 431 Gene3D G3DSA:2.40.50.140 370 431 2.5E-13 T 11-10-2018 TF3313_2532 f70aeb8ce422507e3ffe3507a55f8fc0 431 Pfam PF00919 Uncharacterized protein family UPF0004 5 106 4.7E-22 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 TF3313_2532 f70aeb8ce422507e3ffe3507a55f8fc0 431 Gene3D G3DSA:3.80.30.20 136 369 1.4E-77 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TF3313_2532 f70aeb8ce422507e3ffe3507a55f8fc0 431 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 4 429 58.671 T 11-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 TF3313_0042 e3e20b8dd3292bc1d6ad3ac3306aac85 412 Pfam PF07075 Protein of unknown function (DUF1343) 46 411 6.9E-130 T 11-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 TF3313_0042 e3e20b8dd3292bc1d6ad3ac3306aac85 412 PIRSF PIRSF016719 1 412 1.8E-136 T 11-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 TF3313_0042 e3e20b8dd3292bc1d6ad3ac3306aac85 412 Gene3D G3DSA:3.90.1150.140 243 396 3.4E-150 T 11-10-2018 TF3313_0042 e3e20b8dd3292bc1d6ad3ac3306aac85 412 Gene3D G3DSA:3.40.50.12170 28 411 3.4E-150 T 11-10-2018 TF3313_0605 37e1d5837c4067a04b2f0e39ca5fb219 175 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 22 157 2.1E-49 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TF3313_0605 37e1d5837c4067a04b2f0e39ca5fb219 175 SUPERFAMILY SSF52121 14 161 8.9E-54 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TF3313_0605 37e1d5837c4067a04b2f0e39ca5fb219 175 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 17 162 28.236 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TF3313_0605 37e1d5837c4067a04b2f0e39ca5fb219 175 Gene3D G3DSA:3.40.50.960 13 162 9.4E-59 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TF3313_0605 37e1d5837c4067a04b2f0e39ca5fb219 175 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 22 158 2.0E-55 T 11-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TF3313_0467 b3cb53afdf93ee31afa91bc6bee11c04 218 SUPERFAMILY SSF51569 1 216 1.57E-73 T 11-10-2018 TF3313_0467 b3cb53afdf93ee31afa91bc6bee11c04 218 ProSitePatterns PS00958 Transaldolase active site. 84 101 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 TF3313_0467 b3cb53afdf93ee31afa91bc6bee11c04 218 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 TF3313_0467 b3cb53afdf93ee31afa91bc6bee11c04 218 Gene3D G3DSA:3.20.20.70 1 218 6.8E-87 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_0467 b3cb53afdf93ee31afa91bc6bee11c04 218 Hamap MF_00494 Probable transaldolase [tal]. 1 218 44.199 T 11-10-2018 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 TF3313_0467 b3cb53afdf93ee31afa91bc6bee11c04 218 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 216 2.4E-84 T 11-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 TF3313_0467 b3cb53afdf93ee31afa91bc6bee11c04 218 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 204 2.3E-58 T 11-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 TF3313_0110 7a85681e62060a5122d194bf69718da6 127 Pfam PF00166 Chaperonin 10 Kd subunit 14 118 6.8E-12 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TF3313_0110 7a85681e62060a5122d194bf69718da6 127 Gene3D G3DSA:2.30.33.40 11 121 2.1E-22 T 11-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 TF3313_0110 7a85681e62060a5122d194bf69718da6 127 SMART SM00883 12 120 1.7E-5 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TF3313_0110 7a85681e62060a5122d194bf69718da6 127 SUPERFAMILY SSF50129 11 120 1.29E-15 T 11-10-2018 IPR011032 GroES-like superfamily TF3313_0938 cb7f32478a07020b28f0092c7af2f527 345 SUPERFAMILY SSF48576 28 344 2.56E-80 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily TF3313_0938 cb7f32478a07020b28f0092c7af2f527 345 Pfam PF00348 Polyprenyl synthetase 53 291 2.7E-61 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 TF3313_0938 cb7f32478a07020b28f0092c7af2f527 345 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 225 237 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site TF3313_0938 cb7f32478a07020b28f0092c7af2f527 345 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 103 117 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site TF3313_0938 cb7f32478a07020b28f0092c7af2f527 345 Gene3D G3DSA:1.10.600.10 22 345 6.7E-99 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily TF3313_1747 9dabc19c78e4367f03cd1c2274585d78 293 SMART SM00342 206 289 2.3E-14 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TF3313_1747 9dabc19c78e4367f03cd1c2274585d78 293 Gene3D G3DSA:1.10.10.60 184 293 6.8E-22 T 11-10-2018 TF3313_1747 9dabc19c78e4367f03cd1c2274585d78 293 SUPERFAMILY SSF46689 245 289 2.37E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TF3313_1747 9dabc19c78e4367f03cd1c2274585d78 293 Pfam PF12833 Helix-turn-helix domain 212 289 2.1E-15 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TF3313_2573 0d1c3be4282f1ad721b2feb182260464 361 PIRSF PIRSF006487 1 361 5.6E-94 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 TF3313_2573 0d1c3be4282f1ad721b2feb182260464 361 Gene3D G3DSA:3.30.1360.120 4 233 9.4E-87 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 TF3313_2573 0d1c3be4282f1ad721b2feb182260464 361 Gene3D G3DSA:4.10.1250.10 235 277 5.2E-16 T 11-10-2018 TF3313_2573 0d1c3be4282f1ad721b2feb182260464 361 SUPERFAMILY SSF103025 1 280 7.22E-97 T 11-10-2018 TF3313_2573 0d1c3be4282f1ad721b2feb182260464 361 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 264 356 5.6E-23 T 11-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 TF3313_2573 0d1c3be4282f1ad721b2feb182260464 361 Gene3D G3DSA:2.40.30.110 279 361 5.3E-27 T 11-10-2018 TF3313_2573 0d1c3be4282f1ad721b2feb182260464 361 Gene3D G3DSA:3.30.70.1400 50 135 9.4E-87 T 11-10-2018 TF3313_2573 0d1c3be4282f1ad721b2feb182260464 361 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 2 360 3.2E-120 T 11-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 TF3313_2573 0d1c3be4282f1ad721b2feb182260464 361 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 361 42.945 T 11-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 TF3313_2573 0d1c3be4282f1ad721b2feb182260464 361 SUPERFAMILY SSF101790 272 360 9.32E-23 T 11-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal TF3313_2573 0d1c3be4282f1ad721b2feb182260464 361 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 257 2.1E-92 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain TF3313_2284 5f546fec18138c5c66b4f5882b61aad4 158 Pfam PF05036 Sporulation related domain 71 135 2.5E-6 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 TF3313_2284 5f546fec18138c5c66b4f5882b61aad4 158 SUPERFAMILY SSF110997 72 138 4.32E-5 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 TF3313_1725 ca8fadb6726e7f25b28ece6af9179253 462 SUPERFAMILY SSF53738 171 266 9.03E-24 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TF3313_1725 ca8fadb6726e7f25b28ece6af9179253 462 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 100 109 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TF3313_1725 ca8fadb6726e7f25b28ece6af9179253 462 SUPERFAMILY SSF53738 268 373 3.37E-22 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TF3313_1725 ca8fadb6726e7f25b28ece6af9179253 462 Gene3D G3DSA:3.40.120.10 6 157 4.5E-33 T 11-10-2018 TF3313_1725 ca8fadb6726e7f25b28ece6af9179253 462 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 400 457 2.5E-9 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TF3313_1725 ca8fadb6726e7f25b28ece6af9179253 462 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 8 142 8.7E-28 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TF3313_1725 ca8fadb6726e7f25b28ece6af9179253 462 SUPERFAMILY SSF53738 8 189 1.22E-31 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TF3313_1725 ca8fadb6726e7f25b28ece6af9179253 462 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 171 264 1.1E-22 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TF3313_1725 ca8fadb6726e7f25b28ece6af9179253 462 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 271 376 5.7E-20 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TF3313_1725 ca8fadb6726e7f25b28ece6af9179253 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 244 259 6.3E-12 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TF3313_1725 ca8fadb6726e7f25b28ece6af9179253 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 99 113 6.3E-12 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TF3313_1725 ca8fadb6726e7f25b28ece6af9179253 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 182 201 6.3E-12 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TF3313_1725 ca8fadb6726e7f25b28ece6af9179253 462 SUPERFAMILY SSF55957 366 461 5.49E-23 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TF3313_1725 ca8fadb6726e7f25b28ece6af9179253 462 Gene3D G3DSA:3.40.120.10 265 370 9.9E-60 T 11-10-2018 TF3313_1725 ca8fadb6726e7f25b28ece6af9179253 462 Gene3D G3DSA:3.40.120.10 173 365 9.9E-60 T 11-10-2018 TF3313_1725 ca8fadb6726e7f25b28ece6af9179253 462 TIGRFAM TIGR03990 Arch_GlmM: phosphoglucosamine mutase 4 456 2.4E-162 T 11-10-2018 IPR024086 Phosphoglucosamine mutase, archaeal type GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TF3313_1725 ca8fadb6726e7f25b28ece6af9179253 462 Gene3D G3DSA:3.30.310.50 378 459 2.4E-27 T 11-10-2018 TF3313_2091 782ae1349853a4648e749ad51630f56c 280 Pfam PF04962 KduI/IolB family 41 265 4.7E-27 T 11-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 TF3313_2091 782ae1349853a4648e749ad51630f56c 280 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 5 280 55.339 T 11-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 TF3313_2091 782ae1349853a4648e749ad51630f56c 280 PIRSF PIRSF006625 5 280 5.9E-135 T 11-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 TF3313_2091 782ae1349853a4648e749ad51630f56c 280 SUPERFAMILY SSF51182 5 264 5.68E-104 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily TF3313_2091 782ae1349853a4648e749ad51630f56c 280 Gene3D G3DSA:2.60.120.10 14 265 3.5E-112 T 11-10-2018 IPR014710 RmlC-like jelly roll fold TF3313_2091 782ae1349853a4648e749ad51630f56c 280 Gene3D G3DSA:2.60.120.520 34 146 3.5E-112 T 11-10-2018 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 TF3313_2347 8fcc5f0fcae93c19a9b35b483e939bf9 214 SUPERFAMILY SSF89392 29 213 3.49E-10 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX TF3313_2347 8fcc5f0fcae93c19a9b35b483e939bf9 214 Gene3D G3DSA:2.50.20.10 21 214 1.8E-39 T 11-10-2018 TF3313_2347 8fcc5f0fcae93c19a9b35b483e939bf9 214 Pfam PF16584 Outer membrane lipoprotein carrier protein LolA 21 167 1.0E-20 T 11-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like TF3313_1409 8b45d7cb6cc56f8d33e8fc2ac2404760 158 Gene3D G3DSA:1.10.455.10 1 157 2.8E-54 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily TF3313_1409 8b45d7cb6cc56f8d33e8fc2ac2404760 158 Pfam PF00177 Ribosomal protein S7p/S5e 2 151 3.3E-57 T 11-10-2018 IPR023798 Ribosomal protein S7 domain TF3313_1409 8b45d7cb6cc56f8d33e8fc2ac2404760 158 SUPERFAMILY SSF47973 7 151 6.28E-53 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily TF3313_1409 8b45d7cb6cc56f8d33e8fc2ac2404760 158 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 2 157 5.5E-59 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 TF3313_1409 8b45d7cb6cc56f8d33e8fc2ac2404760 158 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 158 32.146 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 TF3313_1409 8b45d7cb6cc56f8d33e8fc2ac2404760 158 PIRSF PIRSF002122 1 158 3.3E-50 T 11-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 TF3313_1476 64000629230f18e7cd8e2bcecf5fecbc 206 Pfam PF08241 Methyltransferase domain 50 148 2.1E-21 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 TF3313_1476 64000629230f18e7cd8e2bcecf5fecbc 206 SUPERFAMILY SSF53335 20 204 4.5E-36 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_1476 64000629230f18e7cd8e2bcecf5fecbc 206 Gene3D G3DSA:3.40.50.150 21 200 1.1E-34 T 11-10-2018 TF3313_0011 8bf7ac5241528a54bbcd8047c3a196d1 677 SUPERFAMILY SSF55486 30 677 1.2E-214 T 11-10-2018 TF3313_0011 8bf7ac5241528a54bbcd8047c3a196d1 677 Pfam PF05649 Peptidase family M13 43 421 1.6E-107 T 11-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 TF3313_0011 8bf7ac5241528a54bbcd8047c3a196d1 677 Gene3D G3DSA:3.40.390.10 38 677 3.3E-238 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 TF3313_0011 8bf7ac5241528a54bbcd8047c3a196d1 677 Pfam PF01431 Peptidase family M13 473 674 3.2E-68 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 TF3313_0011 8bf7ac5241528a54bbcd8047c3a196d1 677 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 575 586 3.5E-21 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 TF3313_0011 8bf7ac5241528a54bbcd8047c3a196d1 677 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 504 520 3.5E-21 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 TF3313_0011 8bf7ac5241528a54bbcd8047c3a196d1 677 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 465 477 3.5E-21 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 TF3313_0011 8bf7ac5241528a54bbcd8047c3a196d1 677 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 483 495 3.5E-21 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 TF3313_0011 8bf7ac5241528a54bbcd8047c3a196d1 677 Gene3D G3DSA:1.10.1380.10 69 460 3.3E-238 T 11-10-2018 TF3313_1800 10a06a2726a7804614f87906137b4f59 408 Pfam PF00589 Phage integrase family 231 390 7.3E-21 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TF3313_1800 10a06a2726a7804614f87906137b4f59 408 Pfam PF13102 Phage integrase SAM-like domain 122 216 2.3E-15 T 11-10-2018 IPR025269 Phage integrase SAM-like domain TF3313_1800 10a06a2726a7804614f87906137b4f59 408 Gene3D G3DSA:1.10.150.130 115 225 1.8E-10 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal TF3313_1800 10a06a2726a7804614f87906137b4f59 408 SUPERFAMILY SSF56349 123 399 1.82E-43 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TF3313_1800 10a06a2726a7804614f87906137b4f59 408 Gene3D G3DSA:1.10.443.10 228 404 1.8E-31 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TF3313_1800 10a06a2726a7804614f87906137b4f59 408 Pfam PF17293 Arm DNA-binding domain 12 104 1.6E-15 T 11-10-2018 IPR035386 Arm, DNA-binding domain TF3313_2096 3d72d2c7668ba82ed94429a3630c7703 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 255 1.7E-64 T 11-10-2018 TF3313_2096 3d72d2c7668ba82ed94429a3630c7703 263 SUPERFAMILY SSF51735 7 257 2.53E-80 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_2096 3d72d2c7668ba82ed94429a3630c7703 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TF3313_2096 3d72d2c7668ba82ed94429a3630c7703 263 Gene3D G3DSA:3.40.50.720 1 263 7.0E-87 T 11-10-2018 TF3313_2096 3d72d2c7668ba82ed94429a3630c7703 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 8.0E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_2096 3d72d2c7668ba82ed94429a3630c7703 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 8.0E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_2096 3d72d2c7668ba82ed94429a3630c7703 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 8.0E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_2096 3d72d2c7668ba82ed94429a3630c7703 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 8.0E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_2096 3d72d2c7668ba82ed94429a3630c7703 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 8.0E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_2096 3d72d2c7668ba82ed94429a3630c7703 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 8.0E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_2096 3d72d2c7668ba82ed94429a3630c7703 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 7.4E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_2096 3d72d2c7668ba82ed94429a3630c7703 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 7.4E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_2096 3d72d2c7668ba82ed94429a3630c7703 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 7.4E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_2645 2b4d55060ca5cad99c7252fc4c7d5f7f 257 SUPERFAMILY SSF53335 42 219 1.25E-17 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_2645 2b4d55060ca5cad99c7252fc4c7d5f7f 257 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 1 221 21.526 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 TF3313_2645 2b4d55060ca5cad99c7252fc4c7d5f7f 257 Pfam PF02390 Putative methyltransferase 48 213 1.6E-28 T 11-10-2018 TF3313_2645 2b4d55060ca5cad99c7252fc4c7d5f7f 257 Gene3D G3DSA:3.40.50.150 10 219 1.3E-49 T 11-10-2018 TF3313_1669 66574fc890fb2778e5fa7a704fec9823 425 Gene3D G3DSA:3.40.50.280 28 137 1.5E-5 T 11-10-2018 TF3313_1669 66574fc890fb2778e5fa7a704fec9823 425 SUPERFAMILY SSF102114 166 340 4.32E-17 T 11-10-2018 TF3313_1669 66574fc890fb2778e5fa7a704fec9823 425 SMART SM00729 163 345 0.0034 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TF3313_2305 b58e12d1b8c5edc53ace6d7c89960f48 984 Gene3D G3DSA:2.170.130.10 101 235 2.4E-26 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_2305 b58e12d1b8c5edc53ace6d7c89960f48 984 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 30 983 1.7E-207 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_2305 b58e12d1b8c5edc53ace6d7c89960f48 984 SUPERFAMILY SSF49464 30 111 3.01E-19 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_2305 b58e12d1b8c5edc53ace6d7c89960f48 984 Gene3D G3DSA:2.60.40.1120 31 100 3.4E-6 T 11-10-2018 TF3313_2305 b58e12d1b8c5edc53ace6d7c89960f48 984 Pfam PF07715 TonB-dependent Receptor Plug Domain 122 230 2.9E-18 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_2305 b58e12d1b8c5edc53ace6d7c89960f48 984 Pfam PF13715 CarboxypepD_reg-like domain 32 113 1.3E-17 T 11-10-2018 TF3313_2305 b58e12d1b8c5edc53ace6d7c89960f48 984 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 206 236 1.3E-18 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_2305 b58e12d1b8c5edc53ace6d7c89960f48 984 Pfam PF00593 TonB dependent receptor 356 982 1.1E-35 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_2305 b58e12d1b8c5edc53ace6d7c89960f48 984 SUPERFAMILY SSF56935 111 956 5.13E-86 T 11-10-2018 TF3313_0019 b57eec0f98b720aa443d9934878be1b2 205 Pfam PF09851 Short C-terminal domain 62 89 3.0E-8 T 11-10-2018 IPR018649 SHOCT domain TF3313_0019 b57eec0f98b720aa443d9934878be1b2 205 Pfam PF09685 Domain of unknown function (DUF4870) 110 204 8.5E-28 T 11-10-2018 IPR019109 Protein of unknown function DUF4870 TF3313_0137 9941091101ebdc3530b12b9935d36acc 95 SUPERFAMILY SSF46785 7 93 1.13E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TF3313_0137 9941091101ebdc3530b12b9935d36acc 95 Gene3D G3DSA:1.10.10.10 3 94 4.6E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_0137 9941091101ebdc3530b12b9935d36acc 95 Pfam PF13601 Winged helix DNA-binding domain 13 92 2.8E-31 T 11-10-2018 IPR027395 Winged helix DNA-binding domain TF3313_2638 fc01a06b19efca14f6b62c995558ee70 439 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 382 439 1.2E-10 T 11-10-2018 IPR026444 Secretion system C-terminal sorting domain TF3313_0007 2c6707a0339ca81c407e82aad3afdf3e 406 Gene3D G3DSA:3.50.50.60 94 220 9.3E-12 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TF3313_0007 2c6707a0339ca81c407e82aad3afdf3e 406 SUPERFAMILY SSF51905 16 388 1.1E-20 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TF3313_2759 cfb9f7b12aed02bf3e17d453defe8a98 286 Gene3D G3DSA:3.20.20.150 25 285 4.9E-75 T 11-10-2018 TF3313_2759 cfb9f7b12aed02bf3e17d453defe8a98 286 Pfam PF01261 Xylose isomerase-like TIM barrel 52 221 1.6E-7 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain TF3313_2759 cfb9f7b12aed02bf3e17d453defe8a98 286 SUPERFAMILY SSF51658 31 282 1.93E-34 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily TF3313_2806 f175141f326e2ccc03e8204c97d1dd96 64 SUPERFAMILY SSF46955 15 59 2.29E-5 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily TF3313_2806 f175141f326e2ccc03e8204c97d1dd96 64 Pfam PF12728 Helix-turn-helix domain 14 60 3.3E-8 T 11-10-2018 TF3313_0382 52b34cb9bd59710b23a1d61bb45ac516 150 Pfam PF04074 Domain of unknown function (DUF386) 2 147 5.4E-42 T 11-10-2018 IPR004375 YhcH/YjgK/YiaL family TF3313_0382 52b34cb9bd59710b23a1d61bb45ac516 150 Gene3D G3DSA:2.60.120.370 2 150 4.3E-42 T 11-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily TF3313_0382 52b34cb9bd59710b23a1d61bb45ac516 150 SUPERFAMILY SSF51197 2 149 3.57E-40 T 11-10-2018 TF3313_0382 52b34cb9bd59710b23a1d61bb45ac516 150 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 2 150 2.3E-29 T 11-10-2018 IPR004375 YhcH/YjgK/YiaL family TF3313_2878 b289220c3b3b244309c0acd7eaada046 724 Gene3D G3DSA:3.40.50.300 474 687 4.2E-9 T 11-10-2018 TF3313_2878 b289220c3b3b244309c0acd7eaada046 724 Pfam PF13476 AAA domain 6 261 4.3E-17 T 11-10-2018 IPR038729 Rad50/SbcC-type AAA domain TF3313_2878 b289220c3b3b244309c0acd7eaada046 724 Gene3D G3DSA:3.40.50.300 1 257 7.7E-20 T 11-10-2018 TF3313_2878 b289220c3b3b244309c0acd7eaada046 724 SUPERFAMILY SSF52540 1 679 9.03E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1452 44647df68876be651884ffd8d34f377b 952 SUPERFAMILY SSF49464 31 119 3.53E-12 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_1452 44647df68876be651884ffd8d34f377b 952 Pfam PF13715 CarboxypepD_reg-like domain 34 121 9.9E-15 T 11-10-2018 TF3313_1452 44647df68876be651884ffd8d34f377b 952 Pfam PF07715 TonB-dependent Receptor Plug Domain 130 264 9.0E-13 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_1452 44647df68876be651884ffd8d34f377b 952 Gene3D G3DSA:2.60.40.1120 33 110 5.6E-5 T 11-10-2018 TF3313_1452 44647df68876be651884ffd8d34f377b 952 Gene3D G3DSA:2.40.170.20 331 781 1.8E-15 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_1452 44647df68876be651884ffd8d34f377b 952 SUPERFAMILY SSF56935 119 917 4.4E-43 T 11-10-2018 TF3313_1452 44647df68876be651884ffd8d34f377b 952 Gene3D G3DSA:2.170.130.10 111 267 4.9E-14 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_2205 74ac923ff3aa0a26111cb5e672dd5818 332 SUPERFAMILY SSF55979 248 327 1.38E-13 T 11-10-2018 TF3313_2205 74ac923ff3aa0a26111cb5e672dd5818 332 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 5.0E-17 T 11-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 TF3313_2205 74ac923ff3aa0a26111cb5e672dd5818 332 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 248 327 4.6E-12 T 11-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 TF3313_2205 74ac923ff3aa0a26111cb5e672dd5818 332 SUPERFAMILY SSF55979 1 119 5.1E-19 T 11-10-2018 TF3313_2205 74ac923ff3aa0a26111cb5e672dd5818 332 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 327 7.3E-64 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 TF3313_2205 74ac923ff3aa0a26111cb5e672dd5818 332 Gene3D G3DSA:3.10.150.10 1 244 2.0E-88 T 11-10-2018 TF3313_2205 74ac923ff3aa0a26111cb5e672dd5818 332 SMART SM00480 17 331 6.7E-44 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 TF3313_2205 74ac923ff3aa0a26111cb5e672dd5818 332 PIRSF PIRSF000804 1 332 8.1E-84 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 TF3313_2205 74ac923ff3aa0a26111cb5e672dd5818 332 Gene3D G3DSA:3.70.10.10 140 327 2.0E-88 T 11-10-2018 TF3313_2205 74ac923ff3aa0a26111cb5e672dd5818 332 SUPERFAMILY SSF55979 126 246 2.04E-20 T 11-10-2018 TF3313_2205 74ac923ff3aa0a26111cb5e672dd5818 332 Pfam PF02767 DNA polymerase III beta subunit, central domain 132 245 7.8E-22 T 11-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 TF3313_2249 d2f59250d19a327a9604f1550d7b21f0 138 SUPERFAMILY SSF46689 41 82 6.09E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TF3313_2249 d2f59250d19a327a9604f1550d7b21f0 138 Pfam PF13384 Homeodomain-like domain 41 81 5.7E-6 T 11-10-2018 TF3313_2482 0887f8750dded16845b411983ef583e1 76 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 15 26 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TF3313_2482 0887f8750dded16845b411983ef583e1 76 Pfam PF12838 4Fe-4S dicluster domain 14 66 2.5E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TF3313_2482 0887f8750dded16845b411983ef583e1 76 Gene3D G3DSA:3.30.70.20 7 75 1.1E-13 T 11-10-2018 TF3313_2482 0887f8750dded16845b411983ef583e1 76 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 53 64 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TF3313_2482 0887f8750dded16845b411983ef583e1 76 SUPERFAMILY SSF54862 4 71 2.81E-15 T 11-10-2018 TF3313_1727 7309b162d436a5f95bb1fb670ebaaa0e 92 Pfam PF01016 Ribosomal L27 protein 2 81 3.8E-38 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1727 7309b162d436a5f95bb1fb670ebaaa0e 92 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 11-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1727 7309b162d436a5f95bb1fb670ebaaa0e 92 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 27.476 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1727 7309b162d436a5f95bb1fb670ebaaa0e 92 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 69 3.0E-14 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1727 7309b162d436a5f95bb1fb670ebaaa0e 92 Gene3D G3DSA:2.40.50.100 21 91 8.3E-31 T 11-10-2018 TF3313_1727 7309b162d436a5f95bb1fb670ebaaa0e 92 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 81 1.1E-36 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1727 7309b162d436a5f95bb1fb670ebaaa0e 92 PRINTS PR00063 Ribosomal protein L27 signature 4 28 7.3E-37 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1727 7309b162d436a5f95bb1fb670ebaaa0e 92 PRINTS PR00063 Ribosomal protein L27 signature 54 78 7.3E-37 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1727 7309b162d436a5f95bb1fb670ebaaa0e 92 PRINTS PR00063 Ribosomal protein L27 signature 29 53 7.3E-37 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1727 7309b162d436a5f95bb1fb670ebaaa0e 92 SUPERFAMILY SSF110324 2 81 9.42E-34 T 11-10-2018 TF3313_2430 39d87c2fe2c40d3aa13b52ab31b2fca7 472 SUPERFAMILY SSF63965 260 459 3.53E-59 T 11-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 TF3313_2430 39d87c2fe2c40d3aa13b52ab31b2fca7 472 PIRSF PIRSF004874 2 472 3.5E-174 T 11-10-2018 IPR014422 Cobalamin (vitamin B12) biosynthesis, bifunctional CbiH/CbiC GO:0009236 KEGG: 00860+5.4.99.60|MetaCyc: PWY-7377 TF3313_2430 39d87c2fe2c40d3aa13b52ab31b2fca7 472 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 8 215 1.6E-42 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 TF3313_2430 39d87c2fe2c40d3aa13b52ab31b2fca7 472 Pfam PF02570 Precorrin-8X methylmutase 262 458 1.4E-63 T 11-10-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 TF3313_2430 39d87c2fe2c40d3aa13b52ab31b2fca7 472 SUPERFAMILY SSF53790 7 249 8.77E-56 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 TF3313_2430 39d87c2fe2c40d3aa13b52ab31b2fca7 472 Gene3D G3DSA:3.30.950.10 119 249 5.9E-52 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 TF3313_2430 39d87c2fe2c40d3aa13b52ab31b2fca7 472 Gene3D G3DSA:3.40.50.10230 252 469 8.9E-66 T 11-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 TF3313_2430 39d87c2fe2c40d3aa13b52ab31b2fca7 472 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 9 247 5.2E-96 T 11-10-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 TF3313_2430 39d87c2fe2c40d3aa13b52ab31b2fca7 472 Gene3D G3DSA:3.40.1010.10 2 118 2.2E-28 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 TF3313_1111 df3398bd08f38ff163643dd23b222599 455 SUPERFAMILY SSF53474 106 453 1.86E-49 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TF3313_1111 df3398bd08f38ff163643dd23b222599 455 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 219 249 - T 11-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 TF3313_1111 df3398bd08f38ff163643dd23b222599 455 Pfam PF12146 Serine aminopeptidase, S33 182 420 2.8E-15 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 TF3313_1077 16591aac4f38e45bd24674133946929c 513 SUPERFAMILY SSF53649 27 492 5.52E-105 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 TF3313_1077 16591aac4f38e45bd24674133946929c 513 Pfam PF00884 Sulfatase 28 387 1.3E-52 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 TF3313_1077 16591aac4f38e45bd24674133946929c 513 ProSitePatterns PS00523 Sulfatases signature 1. 80 92 - T 11-10-2018 IPR024607 Sulfatase, conserved site TF3313_1077 16591aac4f38e45bd24674133946929c 513 Gene3D G3DSA:3.30.1120.10 421 486 1.7E-111 T 11-10-2018 TF3313_1077 16591aac4f38e45bd24674133946929c 513 Gene3D G3DSA:3.40.720.10 27 420 1.7E-111 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 TF3313_2218 a414ccca1c8a36248ba0e5df0214d994 203 SMART SM00935 25 196 1.6E-20 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 TF3313_2218 a414ccca1c8a36248ba0e5df0214d994 203 Gene3D G3DSA:3.30.910.20 40 203 7.0E-22 T 11-10-2018 IPR024930 Skp domain superfamily TF3313_2218 a414ccca1c8a36248ba0e5df0214d994 203 SUPERFAMILY SSF111384 49 196 2.48E-16 T 11-10-2018 TF3313_2218 a414ccca1c8a36248ba0e5df0214d994 203 Pfam PF03938 Outer membrane protein (OmpH-like) 34 195 2.7E-26 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 TF3313_1349 2eb3f4897ba79beb4eeac7a9cf2f81a6 292 SUPERFAMILY SSF54001 15 252 1.96E-40 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TF3313_1349 2eb3f4897ba79beb4eeac7a9cf2f81a6 292 ProDom PD004169 PRECURSOR CYSTEINE STREPTOCOCCAL STREPTOPAIN PROTEINASE PROTEASE THIOL B STREPTOCOCCUS EXOTOXIN 24 240 2.0E-6 T 11-10-2018 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 TF3313_1349 2eb3f4897ba79beb4eeac7a9cf2f81a6 292 Pfam PF01640 Peptidase C10 family 26 240 5.3E-40 T 11-10-2018 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 TF3313_1349 2eb3f4897ba79beb4eeac7a9cf2f81a6 292 Gene3D G3DSA:3.90.70.50 13 259 2.6E-47 T 11-10-2018 TF3313_0979 438f2ed09543e13ad77a8ddee82fa804 386 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 27 382 8.3E-120 T 11-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 TF3313_0979 438f2ed09543e13ad77a8ddee82fa804 386 Gene3D G3DSA:3.40.50.2000 206 370 4.5E-67 T 11-10-2018 TF3313_0979 438f2ed09543e13ad77a8ddee82fa804 386 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 4 383 2.7E-153 T 11-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 TF3313_0979 438f2ed09543e13ad77a8ddee82fa804 386 Gene3D G3DSA:3.40.50.2000 2 205 3.5E-81 T 11-10-2018 TF3313_0979 438f2ed09543e13ad77a8ddee82fa804 386 SUPERFAMILY SSF53756 1 382 3.65E-136 T 11-10-2018 TF3313_1081 ffe3f4b191d0aed5e34f843870b2a4ae 601 Gene3D G3DSA:1.20.58.220 389 598 1.5E-8 T 11-10-2018 IPR038078 PhoU-like domain superfamily TF3313_1081 ffe3f4b191d0aed5e34f843870b2a4ae 601 Pfam PF01895 PhoU domain 404 491 3.5E-9 T 11-10-2018 IPR026022 PhoU domain TF3313_1081 ffe3f4b191d0aed5e34f843870b2a4ae 601 SUPERFAMILY SSF109755 388 597 2.49E-22 T 11-10-2018 TF3313_1081 ffe3f4b191d0aed5e34f843870b2a4ae 601 Pfam PF02690 Na+/Pi-cotransporter 17 156 2.0E-49 T 11-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 TF3313_1081 ffe3f4b191d0aed5e34f843870b2a4ae 601 Pfam PF02690 Na+/Pi-cotransporter 186 269 8.0E-13 T 11-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 TF3313_1081 ffe3f4b191d0aed5e34f843870b2a4ae 601 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 8 290 3.0E-71 T 11-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 TF3313_1990 58f2e60d9d4590822441cd6b147385a2 370 SUPERFAMILY SSF56601 12 369 8.21E-76 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TF3313_1990 58f2e60d9d4590822441cd6b147385a2 370 Gene3D G3DSA:3.40.710.10 32 369 1.1E-73 T 11-10-2018 TF3313_1990 58f2e60d9d4590822441cd6b147385a2 370 Pfam PF00144 Beta-lactamase 78 349 7.2E-30 T 11-10-2018 IPR001466 Beta-lactamase-related TF3313_1024 aa58245dccba6100a2bfbd43c8ac9114 478 SUPERFAMILY SSF56300 21 294 1.3E-72 T 11-10-2018 TF3313_1024 aa58245dccba6100a2bfbd43c8ac9114 478 Gene3D G3DSA:3.60.21.10 19 300 1.7E-73 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like TF3313_1024 aa58245dccba6100a2bfbd43c8ac9114 478 Gene3D G3DSA:3.90.780.10 302 478 6.9E-32 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TF3313_1024 aa58245dccba6100a2bfbd43c8ac9114 478 Pfam PF00149 Calcineurin-like phosphoesterase 29 229 1.0E-11 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TF3313_1024 aa58245dccba6100a2bfbd43c8ac9114 478 PRINTS PR01607 Apyrase family signature 240 260 1.0E-25 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TF3313_1024 aa58245dccba6100a2bfbd43c8ac9114 478 PRINTS PR01607 Apyrase family signature 347 370 1.0E-25 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TF3313_1024 aa58245dccba6100a2bfbd43c8ac9114 478 PRINTS PR01607 Apyrase family signature 193 210 1.0E-25 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TF3313_1024 aa58245dccba6100a2bfbd43c8ac9114 478 PRINTS PR01607 Apyrase family signature 22 40 1.0E-25 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TF3313_1024 aa58245dccba6100a2bfbd43c8ac9114 478 PRINTS PR01607 Apyrase family signature 418 437 1.0E-25 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TF3313_1024 aa58245dccba6100a2bfbd43c8ac9114 478 PRINTS PR01607 Apyrase family signature 212 235 1.0E-25 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TF3313_1024 aa58245dccba6100a2bfbd43c8ac9114 478 Pfam PF02872 5'-nucleotidase, C-terminal domain 310 435 1.7E-22 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TF3313_1024 aa58245dccba6100a2bfbd43c8ac9114 478 SUPERFAMILY SSF55816 297 470 6.02E-30 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TF3313_1832 7946029a074e267110a62c16abcdcfc7 447 Pfam PF00534 Glycosyl transferases group 1 283 415 1.5E-15 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 TF3313_1832 7946029a074e267110a62c16abcdcfc7 447 Gene3D G3DSA:3.40.50.2000 1 192 4.3E-8 T 11-10-2018 TF3313_1832 7946029a074e267110a62c16abcdcfc7 447 Gene3D G3DSA:3.40.50.2000 264 423 9.3E-22 T 11-10-2018 TF3313_1832 7946029a074e267110a62c16abcdcfc7 447 SUPERFAMILY SSF53756 1 447 1.63E-40 T 11-10-2018 TF3313_0933 b5141aadbe3343476def435e954abc6e 264 SUPERFAMILY SSF55831 1 264 1.83E-128 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 TF3313_0933 b5141aadbe3343476def435e954abc6e 264 Gene3D G3DSA:3.30.572.10 1 264 3.1E-129 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 TF3313_0933 b5141aadbe3343476def435e954abc6e 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 3.7E-49 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 TF3313_0933 b5141aadbe3343476def435e954abc6e 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 3.7E-49 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 TF3313_0933 b5141aadbe3343476def435e954abc6e 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 3.7E-49 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 TF3313_0933 b5141aadbe3343476def435e954abc6e 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 3.7E-49 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 TF3313_0933 b5141aadbe3343476def435e954abc6e 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 3.7E-49 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 TF3313_0933 b5141aadbe3343476def435e954abc6e 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 84 2.2E-41 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 TF3313_0933 b5141aadbe3343476def435e954abc6e 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 85 264 2.2E-90 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 TF3313_0933 b5141aadbe3343476def435e954abc6e 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 40.509 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 TF3313_0933 b5141aadbe3343476def435e954abc6e 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 11-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 TF3313_0933 b5141aadbe3343476def435e954abc6e 264 Pfam PF00303 Thymidylate synthase 2 264 8.9E-124 T 11-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 TF3313_1860 15c2898e159004f4cdc7ec9ae3697b48 607 Gene3D G3DSA:3.40.720.10 245 551 1.0E-45 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 TF3313_1860 15c2898e159004f4cdc7ec9ae3697b48 607 PIRSF PIRSF005091 7 606 5.5E-65 T 11-10-2018 IPR012160 Lipoteichoic acid synthase-like TF3313_1860 15c2898e159004f4cdc7ec9ae3697b48 607 Pfam PF00884 Sulfatase 253 545 9.0E-20 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 TF3313_1860 15c2898e159004f4cdc7ec9ae3697b48 607 SUPERFAMILY SSF53649 251 563 3.14E-34 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 TF3313_2682 0c0e8d793626acf9ca713d78e02759ed 400 Pfam PF01548 Transposase 8 151 1.3E-19 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 TF3313_2682 0c0e8d793626acf9ca713d78e02759ed 400 Pfam PF02371 Transposase IS116/IS110/IS902 family 252 331 4.0E-19 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 TF3313_1292 2a55ce1d98cd8827453f279c3fa5b68a 1055 SUPERFAMILY SSF49464 23 103 5.89E-20 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_1292 2a55ce1d98cd8827453f279c3fa5b68a 1055 Pfam PF13715 CarboxypepD_reg-like domain 25 105 1.3E-19 T 11-10-2018 TF3313_1292 2a55ce1d98cd8827453f279c3fa5b68a 1055 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 24 1055 9.5E-196 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_1292 2a55ce1d98cd8827453f279c3fa5b68a 1055 Gene3D G3DSA:2.170.130.10 97 241 2.7E-34 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_1292 2a55ce1d98cd8827453f279c3fa5b68a 1055 Pfam PF00593 TonB dependent receptor 434 1017 4.1E-25 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_1292 2a55ce1d98cd8827453f279c3fa5b68a 1055 Gene3D G3DSA:2.60.40.1120 25 96 7.3E-8 T 11-10-2018 TF3313_1292 2a55ce1d98cd8827453f279c3fa5b68a 1055 Pfam PF07715 TonB-dependent Receptor Plug Domain 114 236 3.1E-21 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_1292 2a55ce1d98cd8827453f279c3fa5b68a 1055 SUPERFAMILY SSF56935 101 1055 4.4E-87 T 11-10-2018 TF3313_1292 2a55ce1d98cd8827453f279c3fa5b68a 1055 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 212 242 2.0E-17 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_0139 322730446078bc36f4b28e9ff34153a5 422 Pfam PF13439 Glycosyltransferase Family 4 132 227 7.2E-18 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 TF3313_0139 322730446078bc36f4b28e9ff34153a5 422 Gene3D G3DSA:3.40.50.2000 248 406 4.1E-36 T 11-10-2018 TF3313_0139 322730446078bc36f4b28e9ff34153a5 422 SUPERFAMILY SSF53756 1 418 5.89E-79 T 11-10-2018 TF3313_0139 322730446078bc36f4b28e9ff34153a5 422 Pfam PF00534 Glycosyl transferases group 1 242 394 1.7E-34 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 TF3313_0139 322730446078bc36f4b28e9ff34153a5 422 Gene3D G3DSA:3.40.50.2000 1 247 4.7E-35 T 11-10-2018 TF3313_2940 30d82e26a9e7264fe2c9d9ac3b936ff3 511 Gene3D G3DSA:3.40.50.300 183 477 3.7E-97 T 11-10-2018 TF3313_2940 30d82e26a9e7264fe2c9d9ac3b936ff3 511 Pfam PF03796 DnaB-like helicase C terminal domain 201 464 1.9E-105 T 11-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 TF3313_2940 30d82e26a9e7264fe2c9d9ac3b936ff3 511 SUPERFAMILY SSF52540 199 456 1.27E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2940 30d82e26a9e7264fe2c9d9ac3b936ff3 511 SUPERFAMILY SSF48024 24 135 4.18E-31 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 TF3313_2940 30d82e26a9e7264fe2c9d9ac3b936ff3 511 Gene3D G3DSA:1.10.860.10 20 182 3.4E-46 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal TF3313_2940 30d82e26a9e7264fe2c9d9ac3b936ff3 511 Pfam PF00772 DnaB-like helicase N terminal domain 26 126 1.5E-29 T 11-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 TF3313_2940 30d82e26a9e7264fe2c9d9ac3b936ff3 511 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 26 466 1.9E-161 T 11-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 TF3313_0194 6de1828635abe6fbd9a9463c5d43d9d6 303 Gene3D G3DSA:3.30.2010.10 81 168 1.2E-25 T 11-10-2018 TF3313_0194 6de1828635abe6fbd9a9463c5d43d9d6 303 Pfam PF01435 Peptidase family M48 87 302 3.6E-34 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 TF3313_2881 23408b4f06b07384bcecfa70be6df945 394 Pfam PF17293 Arm DNA-binding domain 9 85 1.7E-10 T 11-10-2018 IPR035386 Arm, DNA-binding domain TF3313_2881 23408b4f06b07384bcecfa70be6df945 394 SUPERFAMILY SSF56349 126 348 1.14E-21 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TF3313_2881 23408b4f06b07384bcecfa70be6df945 394 Gene3D G3DSA:1.10.150.130 104 221 2.6E-14 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal TF3313_2881 23408b4f06b07384bcecfa70be6df945 394 Gene3D G3DSA:1.10.443.10 223 356 1.3E-8 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TF3313_2881 23408b4f06b07384bcecfa70be6df945 394 Pfam PF13102 Phage integrase SAM-like domain 110 213 2.9E-12 T 11-10-2018 IPR025269 Phage integrase SAM-like domain TF3313_1639 be5fadd06f73d72b52b3a96236f80b5c 214 Gene3D G3DSA:2.60.120.1460 2 209 3.4E-47 T 11-10-2018 TF3313_1639 be5fadd06f73d72b52b3a96236f80b5c 214 SUPERFAMILY SSF46785 161 207 5.81E-9 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TF3313_1639 be5fadd06f73d72b52b3a96236f80b5c 214 Pfam PF13545 Crp-like helix-turn-helix domain 167 207 6.7E-9 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TF3313_1639 be5fadd06f73d72b52b3a96236f80b5c 214 Pfam PF00027 Cyclic nucleotide-binding domain 33 119 9.1E-10 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain TF3313_1639 be5fadd06f73d72b52b3a96236f80b5c 214 SMART SM00419 158 206 3.6E-7 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TF3313_1639 be5fadd06f73d72b52b3a96236f80b5c 214 SUPERFAMILY SSF51206 5 143 1.44E-22 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like TF3313_2648 de2210afedd0d0a82174a3a7ef513b8f 325 Gene3D G3DSA:3.40.1190.20 4 305 2.8E-76 T 11-10-2018 IPR029056 Ribokinase-like TF3313_2648 de2210afedd0d0a82174a3a7ef513b8f 325 SUPERFAMILY SSF53613 1 313 6.08E-73 T 11-10-2018 IPR029056 Ribokinase-like TF3313_2648 de2210afedd0d0a82174a3a7ef513b8f 325 Gene3D G3DSA:3.30.1110.10 11 128 2.8E-76 T 11-10-2018 TF3313_2648 de2210afedd0d0a82174a3a7ef513b8f 325 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 264 277 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 TF3313_2648 de2210afedd0d0a82174a3a7ef513b8f 325 Pfam PF00294 pfkB family carbohydrate kinase 50 310 6.6E-47 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB TF3313_1796 2621ee60497c971f370a249eb1c70d5d 274 Pfam PF00378 Enoyl-CoA hydratase/isomerase 21 267 2.4E-75 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 TF3313_1796 2621ee60497c971f370a249eb1c70d5d 274 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 111 131 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 TF3313_1796 2621ee60497c971f370a249eb1c70d5d 274 Gene3D G3DSA:3.90.226.10 4 210 7.0E-73 T 11-10-2018 TF3313_1796 2621ee60497c971f370a249eb1c70d5d 274 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 6 272 52.256 T 11-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 TF3313_1796 2621ee60497c971f370a249eb1c70d5d 274 SUPERFAMILY SSF52096 5 269 8.4E-79 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TF3313_1796 2621ee60497c971f370a249eb1c70d5d 274 Gene3D G3DSA:1.10.12.10 211 261 1.3E-24 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal TF3313_1796 2621ee60497c971f370a249eb1c70d5d 274 TIGRFAM TIGR01929 menB: naphthoate synthase 12 269 4.1E-146 T 11-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 TF3313_1325 d955d05480e2a7730f0c6f14cd78703b 164 Pfam PF03938 Outer membrane protein (OmpH-like) 5 161 5.4E-39 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 TF3313_1325 d955d05480e2a7730f0c6f14cd78703b 164 SUPERFAMILY SSF111384 18 161 5.1E-27 T 11-10-2018 TF3313_1325 d955d05480e2a7730f0c6f14cd78703b 164 SMART SM00935 8 162 2.8E-37 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 TF3313_1325 d955d05480e2a7730f0c6f14cd78703b 164 Gene3D G3DSA:3.30.910.20 15 164 3.5E-30 T 11-10-2018 IPR024930 Skp domain superfamily TF3313_0975 6d1656106b1064661c3aabfea883ba1f 255 Pfam PF00535 Glycosyl transferase family 2 6 137 1.1E-25 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TF3313_0975 6d1656106b1064661c3aabfea883ba1f 255 Gene3D G3DSA:3.90.550.10 1 236 5.9E-49 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_0975 6d1656106b1064661c3aabfea883ba1f 255 SUPERFAMILY SSF53448 2 250 4.56E-49 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_0119 7cd3c331620140955608e56ec1d8b3ae 339 Gene3D G3DSA:3.30.565.10 206 333 4.5E-7 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TF3313_0119 7cd3c331620140955608e56ec1d8b3ae 339 SUPERFAMILY SSF55874 209 317 1.04E-6 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TF3313_0119 7cd3c331620140955608e56ec1d8b3ae 339 Pfam PF06580 Histidine kinase 152 229 1.4E-20 T 11-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 TF3313_1372 710c8b1aa4dbdf8e2600d8b08dd75067 453 Gene3D G3DSA:3.30.70.1050 1 122 1.0E-26 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 TF3313_1372 710c8b1aa4dbdf8e2600d8b08dd75067 453 SUPERFAMILY SSF109998 262 446 4.05E-15 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily TF3313_1372 710c8b1aa4dbdf8e2600d8b08dd75067 453 PIRSF PIRSF003095 1 451 4.8E-42 T 11-10-2018 IPR005215 Trigger factor GO:0015031 TF3313_1372 710c8b1aa4dbdf8e2600d8b08dd75067 453 TIGRFAM TIGR00115 tig: trigger factor 14 428 6.8E-63 T 11-10-2018 IPR005215 Trigger factor GO:0015031 TF3313_1372 710c8b1aa4dbdf8e2600d8b08dd75067 453 Pfam PF05697 Bacterial trigger factor protein (TF) 1 147 9.7E-33 T 11-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 TF3313_1372 710c8b1aa4dbdf8e2600d8b08dd75067 453 SUPERFAMILY SSF102735 1 134 1.22E-27 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 TF3313_1198 ccdbe9269d442a4673e64d14863389f9 301 Pfam PF12784 PD-(D/E)XK nuclease family transposase 7 225 2.9E-61 T 11-10-2018 TF3313_1198 ccdbe9269d442a4673e64d14863389f9 301 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 9 301 2.7E-32 T 11-10-2018 IPR010106 Recombination-promoting nuclease RpnA TF3313_2357 5867b5f6d2f384a26b8d71cb34cd1f4c 200 SUPERFAMILY SSF52172 4 87 2.2E-5 T 11-10-2018 IPR011006 CheY-like superfamily TF3313_2357 5867b5f6d2f384a26b8d71cb34cd1f4c 200 SMART SM00421 132 189 1.3E-20 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TF3313_2357 5867b5f6d2f384a26b8d71cb34cd1f4c 200 SUPERFAMILY SSF46894 124 195 7.14E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TF3313_2357 5867b5f6d2f384a26b8d71cb34cd1f4c 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 165 7.0E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TF3313_2357 5867b5f6d2f384a26b8d71cb34cd1f4c 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 177 7.0E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TF3313_2357 5867b5f6d2f384a26b8d71cb34cd1f4c 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 135 149 7.0E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TF3313_2357 5867b5f6d2f384a26b8d71cb34cd1f4c 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 135 189 3.0E-16 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TF3313_2357 5867b5f6d2f384a26b8d71cb34cd1f4c 200 Gene3D G3DSA:3.40.50.12740 6 195 1.2E-21 T 11-10-2018 TF3313_2357 5867b5f6d2f384a26b8d71cb34cd1f4c 200 ProSitePatterns PS00622 LuxR-type HTH domain signature. 149 176 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TF3313_2626 e5354ec9eb849968d149bb3740023cd7 627 Pfam PF14322 Starch-binding associating with outer membrane 24 223 5.6E-31 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_2626 e5354ec9eb849968d149bb3740023cd7 627 Pfam PF07980 SusD family 293 625 2.3E-54 T 11-10-2018 IPR012944 RagB/SusD domain TF3313_2626 e5354ec9eb849968d149bb3740023cd7 627 Gene3D G3DSA:1.25.40.390 28 625 7.5E-118 T 11-10-2018 TF3313_2626 e5354ec9eb849968d149bb3740023cd7 627 SUPERFAMILY SSF48452 21 625 4.8E-110 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0186 e068174b7825bcd583d227b738168ab6 479 Gene3D G3DSA:3.30.420.40 242 479 7.0E-95 T 11-10-2018 TF3313_0186 e068174b7825bcd583d227b738168ab6 479 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 248 8.9E-26 T 11-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 TF3313_0186 e068174b7825bcd583d227b738168ab6 479 SUPERFAMILY SSF53067 254 475 1.77E-34 T 11-10-2018 TF3313_0186 e068174b7825bcd583d227b738168ab6 479 Gene3D G3DSA:3.30.420.40 3 241 1.3E-75 T 11-10-2018 TF3313_0186 e068174b7825bcd583d227b738168ab6 479 SUPERFAMILY SSF53067 7 250 5.31E-41 T 11-10-2018 TF3313_0186 e068174b7825bcd583d227b738168ab6 479 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 258 449 9.5E-31 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 TF3313_1577 9ccc1701c928d28aa553cbf0a33e8d98 1261 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 395 829 5.2E-162 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TF3313_1577 9ccc1701c928d28aa553cbf0a33e8d98 1261 SUPERFAMILY SSF160975 929 964 7.19E-6 T 11-10-2018 TF3313_1577 9ccc1701c928d28aa553cbf0a33e8d98 1261 Pfam PF14579 Helix-hairpin-helix motif 902 990 4.6E-27 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TF3313_1577 9ccc1701c928d28aa553cbf0a33e8d98 1261 Gene3D G3DSA:1.10.10.1600 531 608 1.0E-21 T 11-10-2018 TF3313_1577 9ccc1701c928d28aa553cbf0a33e8d98 1261 SMART SM00481 5 117 2.4E-21 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal TF3313_1577 9ccc1701c928d28aa553cbf0a33e8d98 1261 SUPERFAMILY SSF89550 4 321 4.32E-33 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 TF3313_1577 9ccc1701c928d28aa553cbf0a33e8d98 1261 Gene3D G3DSA:1.10.150.870 871 977 2.5E-7 T 11-10-2018 TF3313_1577 9ccc1701c928d28aa553cbf0a33e8d98 1261 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 98 1134 0.0 T 11-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TF3313_1577 9ccc1701c928d28aa553cbf0a33e8d98 1261 Pfam PF02811 PHP domain 6 72 2.2E-17 T 11-10-2018 IPR004013 PHP domain GO:0003824 TF3313_1577 9ccc1701c928d28aa553cbf0a33e8d98 1261 Pfam PF02811 PHP domain 89 222 5.3E-30 T 11-10-2018 IPR004013 PHP domain GO:0003824 TF3313_1016 389ed0c1ee21d95b88c99aff21cc8825 344 Gene3D G3DSA:3.40.50.2000 1 157 9.3E-18 T 11-10-2018 TF3313_1016 389ed0c1ee21d95b88c99aff21cc8825 344 Gene3D G3DSA:3.40.50.2000 164 344 1.9E-28 T 11-10-2018 TF3313_1016 389ed0c1ee21d95b88c99aff21cc8825 344 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 71 311 2.0E-18 T 11-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 TF3313_1016 389ed0c1ee21d95b88c99aff21cc8825 344 SUPERFAMILY SSF53756 3 342 1.13E-65 T 11-10-2018 TF3313_0004 6bce8f5402edf2c3c0c239af6e73a887 1000 Gene3D G3DSA:3.20.20.300 39 393 8.1E-99 T 11-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 TF3313_0004 6bce8f5402edf2c3c0c239af6e73a887 1000 SUPERFAMILY SSF52279 406 557 1.7E-5 T 11-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 TF3313_0004 6bce8f5402edf2c3c0c239af6e73a887 1000 Gene3D G3DSA:3.40.50.1700 394 569 2.2E-18 T 11-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 TF3313_0004 6bce8f5402edf2c3c0c239af6e73a887 1000 SUPERFAMILY SSF56601 585 995 2.6E-69 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TF3313_0004 6bce8f5402edf2c3c0c239af6e73a887 1000 SUPERFAMILY SSF51445 37 401 1.26E-82 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily TF3313_0004 6bce8f5402edf2c3c0c239af6e73a887 1000 Pfam PF00144 Beta-lactamase 591 977 1.4E-46 T 11-10-2018 IPR001466 Beta-lactamase-related TF3313_0004 6bce8f5402edf2c3c0c239af6e73a887 1000 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 54 367 3.4E-77 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 TF3313_1671 5e88a056ab129f4af489a88ce9bdc6fc 340 Pfam PF16169 Domain of unknown function (DUF4872) 156 332 3.8E-56 T 11-10-2018 IPR032369 Domain of unknown function DUF4872 TF3313_1671 5e88a056ab129f4af489a88ce9bdc6fc 340 Pfam PF14399 Butirosin biosynthesis protein H, N-terminal 13 144 1.3E-39 T 11-10-2018 IPR026935 Butirosin biosynthesis protein H, N-terminal KEGG: 00524+2.3.2.19|MetaCyc: PWY-7019 TF3313_1257 eb7151476f44a0d75e89d3acc38f7717 388 Gene3D G3DSA:3.30.1330.10 24 166 1.7E-59 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TF3313_1257 eb7151476f44a0d75e89d3acc38f7717 388 SUPERFAMILY SSF55326 31 165 1.05E-9 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TF3313_1257 eb7151476f44a0d75e89d3acc38f7717 388 Gene3D G3DSA:3.90.650.10 168 388 6.3E-92 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TF3313_1257 eb7151476f44a0d75e89d3acc38f7717 388 SUPERFAMILY SSF56042 174 378 4.5E-33 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TF3313_1257 eb7151476f44a0d75e89d3acc38f7717 388 Pfam PF02769 AIR synthase related protein, C-terminal domain 179 379 6.1E-9 T 11-10-2018 IPR010918 PurM-like, C-terminal domain TF3313_0513 a9d8ac87dae83e9050a58bf069c21078 533 Pfam PF02706 Chain length determinant protein 8 106 5.1E-6 T 11-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 TF3313_2899 094ea13d9b767b68cc0f4caff9f522c6 383 Gene3D G3DSA:3.30.1330.40 261 378 1.3E-25 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 TF3313_2899 094ea13d9b767b68cc0f4caff9f522c6 383 SUPERFAMILY SSF55298 275 375 6.75E-21 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 TF3313_2899 094ea13d9b767b68cc0f4caff9f522c6 383 Gene3D G3DSA:3.30.1330.40 124 244 6.0E-9 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 TF3313_2899 094ea13d9b767b68cc0f4caff9f522c6 383 Pfam PF01042 Endoribonuclease L-PSP 274 372 4.4E-14 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 TF3313_1338 86f2518c979214e2abfe755854e1dcf9 481 Pfam PF00224 Pyruvate kinase, barrel domain 3 332 2.7E-116 T 11-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TF3313_1338 86f2518c979214e2abfe755854e1dcf9 481 Gene3D G3DSA:3.40.1380.20 330 459 7.9E-151 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TF3313_1338 86f2518c979214e2abfe755854e1dcf9 481 Pfam PF02887 Pyruvate kinase, alpha/beta domain 355 459 1.5E-11 T 11-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TF3313_1338 86f2518c979214e2abfe755854e1dcf9 481 SUPERFAMILY SSF52935 317 465 2.88E-23 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TF3313_1338 86f2518c979214e2abfe755854e1dcf9 481 Gene3D G3DSA:2.40.33.10 67 163 7.9E-151 T 11-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TF3313_1338 86f2518c979214e2abfe755854e1dcf9 481 PRINTS PR01050 Pyruvate kinase family signature 238 262 4.0E-67 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TF3313_1338 86f2518c979214e2abfe755854e1dcf9 481 PRINTS PR01050 Pyruvate kinase family signature 307 323 4.0E-67 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TF3313_1338 86f2518c979214e2abfe755854e1dcf9 481 PRINTS PR01050 Pyruvate kinase family signature 181 195 4.0E-67 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TF3313_1338 86f2518c979214e2abfe755854e1dcf9 481 PRINTS PR01050 Pyruvate kinase family signature 211 237 4.0E-67 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TF3313_1338 86f2518c979214e2abfe755854e1dcf9 481 PRINTS PR01050 Pyruvate kinase family signature 288 306 4.0E-67 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TF3313_1338 86f2518c979214e2abfe755854e1dcf9 481 PRINTS PR01050 Pyruvate kinase family signature 263 287 4.0E-67 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TF3313_1338 86f2518c979214e2abfe755854e1dcf9 481 PRINTS PR01050 Pyruvate kinase family signature 56 72 4.0E-67 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TF3313_1338 86f2518c979214e2abfe755854e1dcf9 481 SUPERFAMILY SSF50800 67 162 6.98E-21 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily TF3313_1338 86f2518c979214e2abfe755854e1dcf9 481 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 465 3.2E-149 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TF3313_1338 86f2518c979214e2abfe755854e1dcf9 481 SUPERFAMILY SSF51621 2 332 1.67E-85 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TF3313_1338 86f2518c979214e2abfe755854e1dcf9 481 Gene3D G3DSA:3.20.20.60 3 329 7.9E-151 T 11-10-2018 TF3313_1338 86f2518c979214e2abfe755854e1dcf9 481 ProSitePatterns PS00110 Pyruvate kinase active site signature. 209 221 - T 11-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TF3313_0756 94530ed80942993599bbe24f1597455f 183 Gene3D G3DSA:3.30.70.120 97 163 7.7E-6 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal TF3313_0756 94530ed80942993599bbe24f1597455f 183 Hamap MF_01515 UPF0316 protein . 10 178 26.962 T 11-10-2018 IPR022930 Protein of unknown function UPF0316 TF3313_0756 94530ed80942993599bbe24f1597455f 183 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 119 166 5.5E-10 T 11-10-2018 IPR019264 Domain of unknown function DUF2179 TF3313_0397 cd307924954270053c64c4c924a5787c 372 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 363 7.5E-42 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TF3313_0397 cd307924954270053c64c4c924a5787c 372 Gene3D G3DSA:2.40.50.100 64 222 1.4E-54 T 11-10-2018 TF3313_0397 cd307924954270053c64c4c924a5787c 372 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 55 269 1.2E-12 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TF3313_0397 cd307924954270053c64c4c924a5787c 372 Gene3D G3DSA:2.40.30.170 53 302 1.4E-54 T 11-10-2018 TF3313_0397 cd307924954270053c64c4c924a5787c 372 SUPERFAMILY SSF111369 56 275 7.85E-15 T 11-10-2018 TF3313_0397 cd307924954270053c64c4c924a5787c 372 Gene3D G3DSA:2.40.420.20 48 363 1.4E-54 T 11-10-2018 TF3313_0397 cd307924954270053c64c4c924a5787c 372 Gene3D G3DSA:1.10.287.470 98 182 1.4E-54 T 11-10-2018 TF3313_2539 28369d02c968040090c02ab24f1ca7c8 530 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 380 512 4.6E-14 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 TF3313_2539 28369d02c968040090c02ab24f1ca7c8 530 SUPERFAMILY SSF52518 347 517 9.77E-22 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold TF3313_2539 28369d02c968040090c02ab24f1ca7c8 530 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 15 184 1.1E-14 T 11-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 TF3313_2539 28369d02c968040090c02ab24f1ca7c8 530 PIRSF PIRSF006439 1 530 4.7E-162 T 11-10-2018 IPR017721 Indolepyruvate ferredoxin oxidoreductase, alpha subunit GO:0043805|GO:0055114 TF3313_2539 28369d02c968040090c02ab24f1ca7c8 530 Gene3D G3DSA:3.40.50.970 1 182 3.5E-53 T 11-10-2018 TF3313_2539 28369d02c968040090c02ab24f1ca7c8 530 SUPERFAMILY SSF52518 1 197 5.01E-57 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold TF3313_2539 28369d02c968040090c02ab24f1ca7c8 530 Gene3D G3DSA:3.40.50.970 357 527 2.0E-10 T 11-10-2018 TF3313_2646 d83ed8e2ff84e814d8b2639528de44ce 368 Pfam PF01883 Iron-sulfur cluster assembly protein 8 67 8.1E-11 T 11-10-2018 IPR002744 MIP18 family-like TF3313_2646 d83ed8e2ff84e814d8b2639528de44ce 368 Gene3D G3DSA:3.40.50.300 87 344 6.9E-78 T 11-10-2018 TF3313_2646 d83ed8e2ff84e814d8b2639528de44ce 368 SUPERFAMILY SSF52540 101 354 4.37E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2646 d83ed8e2ff84e814d8b2639528de44ce 368 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 99 347 2.0E-91 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 TF3313_2646 d83ed8e2ff84e814d8b2639528de44ce 368 ProSitePatterns PS01215 Mrp family signature. 209 225 - T 11-10-2018 IPR000808 Mrp, conserved site GO:0005524 TF3313_2646 d83ed8e2ff84e814d8b2639528de44ce 368 SUPERFAMILY SSF117916 3 68 8.83E-10 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily TF3313_2646 d83ed8e2ff84e814d8b2639528de44ce 368 Hamap MF_02040 Iron-sulfur cluster carrier protein. 94 348 34.284 T 11-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein TF3313_0022 9583b7edad19f6799de1a48b597a3cc4 753 Gene3D G3DSA:3.80.10.10 574 742 1.0E-32 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily TF3313_0022 9583b7edad19f6799de1a48b597a3cc4 753 Gene3D G3DSA:3.80.10.10 15 365 4.7E-71 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily TF3313_0022 9583b7edad19f6799de1a48b597a3cc4 753 Gene3D G3DSA:3.80.10.10 400 573 1.5E-26 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily TF3313_0022 9583b7edad19f6799de1a48b597a3cc4 753 SUPERFAMILY SSF52058 48 308 7.48E-28 T 11-10-2018 TF3313_0022 9583b7edad19f6799de1a48b597a3cc4 753 Pfam PF13202 EF hand 32 48 0.0038 T 11-10-2018 IPR002048 EF-hand domain GO:0005509 TF3313_0022 9583b7edad19f6799de1a48b597a3cc4 753 SUPERFAMILY SSF52058 442 721 2.3E-30 T 11-10-2018 TF3313_0606 54b3429cebd7b6b23d62f3258a09d2d1 230 SUPERFAMILY SSF48452 61 212 1.1E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0606 54b3429cebd7b6b23d62f3258a09d2d1 230 Gene3D G3DSA:1.25.40.10 50 230 6.8E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0606 54b3429cebd7b6b23d62f3258a09d2d1 230 SMART SM00028 105 138 490.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_0606 54b3429cebd7b6b23d62f3258a09d2d1 230 SMART SM00028 177 210 15.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_0606 54b3429cebd7b6b23d62f3258a09d2d1 230 SMART SM00028 140 173 11.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_0606 54b3429cebd7b6b23d62f3258a09d2d1 230 Pfam PF13181 Tetratricopeptide repeat 145 167 0.0069 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_0606 54b3429cebd7b6b23d62f3258a09d2d1 230 Pfam PF13174 Tetratricopeptide repeat 182 207 0.039 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2829 a58e6c552eaac686ea6c2517140c9be5 139 Pfam PF07030 Protein of unknown function (DUF1320) 4 118 4.0E-6 T 11-10-2018 IPR009752 Bacteriophage Mu, Gp36 TF3313_2794 aeec8e5fe3253bb2e41ca79fe88874ff 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 52 2.5E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TF3313_2794 aeec8e5fe3253bb2e41ca79fe88874ff 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 20 50 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site TF3313_2794 aeec8e5fe3253bb2e41ca79fe88874ff 198 SUPERFAMILY SSF48498 107 196 4.45E-7 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TF3313_2794 aeec8e5fe3253bb2e41ca79fe88874ff 198 Gene3D G3DSA:1.10.357.10 1 197 1.7E-29 T 11-10-2018 TF3313_2794 aeec8e5fe3253bb2e41ca79fe88874ff 198 SUPERFAMILY SSF46689 3 59 2.41E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TF3313_2794 aeec8e5fe3253bb2e41ca79fe88874ff 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 7.6E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TF3313_2794 aeec8e5fe3253bb2e41ca79fe88874ff 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 7.6E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TF3313_2875 f4c8864246f6648596eb71f407f99fe1 1069 SUPERFAMILY SSF52540 29 184 6.16E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2875 f4c8864246f6648596eb71f407f99fe1 1069 Gene3D G3DSA:3.40.50.300 22 184 1.7E-5 T 11-10-2018 TF3313_1595 fff22939aeda239c16a55a3272275752 340 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 2 335 41.588 T 11-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 TF3313_1595 fff22939aeda239c16a55a3272275752 340 Gene3D G3DSA:3.30.930.10 6 339 1.7E-113 T 11-10-2018 TF3313_1595 fff22939aeda239c16a55a3272275752 340 SUPERFAMILY SSF46589 15 79 6.28E-12 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 TF3313_1595 fff22939aeda239c16a55a3272275752 340 Pfam PF01409 tRNA synthetases class II core domain (F) 87 335 1.1E-95 T 11-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 TF3313_1595 fff22939aeda239c16a55a3272275752 340 SUPERFAMILY SSF55681 87 336 1.78E-77 T 11-10-2018 TF3313_1595 fff22939aeda239c16a55a3272275752 340 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 336 1.7E-92 T 11-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 TF3313_1595 fff22939aeda239c16a55a3272275752 340 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 19 83 5.9E-18 T 11-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 TF3313_2397 15d853390a6a551a7b9db67f4de7728e 364 SUPERFAMILY SSF110997 287 357 1.44E-7 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 TF3313_2397 15d853390a6a551a7b9db67f4de7728e 364 Gene3D G3DSA:3.30.70.1070 288 357 4.2E-5 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 TF3313_2397 15d853390a6a551a7b9db67f4de7728e 364 Pfam PF05036 Sporulation related domain 287 351 2.1E-7 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 TF3313_0460 6b8c97a9603877213a32ea5f62c25277 1103 Gene3D G3DSA:2.60.40.1120 84 154 8.6E-8 T 11-10-2018 TF3313_0460 6b8c97a9603877213a32ea5f62c25277 1103 Pfam PF07715 TonB-dependent Receptor Plug Domain 179 295 4.9E-19 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_0460 6b8c97a9603877213a32ea5f62c25277 1103 SUPERFAMILY SSF56935 161 1103 5.13E-90 T 11-10-2018 TF3313_0460 6b8c97a9603877213a32ea5f62c25277 1103 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 271 301 4.1E-19 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_0460 6b8c97a9603877213a32ea5f62c25277 1103 SUPERFAMILY SSF49464 83 163 2.49E-20 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_0460 6b8c97a9603877213a32ea5f62c25277 1103 Pfam PF13715 CarboxypepD_reg-like domain 85 165 3.1E-20 T 11-10-2018 TF3313_0460 6b8c97a9603877213a32ea5f62c25277 1103 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 83 1103 2.4E-256 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_0460 6b8c97a9603877213a32ea5f62c25277 1103 Pfam PF00593 TonB dependent receptor 516 1101 8.9E-26 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_0460 6b8c97a9603877213a32ea5f62c25277 1103 Gene3D G3DSA:2.170.130.10 155 300 2.1E-33 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 Gene3D G3DSA:3.10.20.660 925 1009 1.7E-5 T 11-10-2018 TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 Gene3D G3DSA:3.10.20.660 1236 1320 2.2E-5 T 11-10-2018 TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 Gene3D G3DSA:3.10.20.660 540 617 2.0E-7 T 11-10-2018 TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 Gene3D G3DSA:3.10.20.660 779 850 6.2E-6 T 11-10-2018 TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 Gene3D G3DSA:3.10.20.660 1391 1480 4.6E-5 T 11-10-2018 TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 Gene3D G3DSA:3.10.20.660 1552 1634 8.0E-6 T 11-10-2018 TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 Gene3D G3DSA:3.10.20.660 1080 1155 3.1E-5 T 11-10-2018 TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 SUPERFAMILY SSF141072 328 448 7.06E-9 T 11-10-2018 IPR038081 CalX-like domain superfamily TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 810 852 9.6E-15 T 11-10-2018 IPR013378 Listeria/Bacterioides repeat TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 1433 1481 8.3E-15 T 11-10-2018 IPR013378 Listeria/Bacterioides repeat TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 732 780 3.2E-14 T 11-10-2018 IPR013378 Listeria/Bacterioides repeat TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 1275 1319 5.0E-10 T 11-10-2018 IPR013378 Listeria/Bacterioides repeat TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 651 693 6.6E-14 T 11-10-2018 IPR013378 Listeria/Bacterioides repeat TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 886 927 4.0E-12 T 11-10-2018 IPR013378 Listeria/Bacterioides repeat TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 964 1009 5.6E-14 T 11-10-2018 IPR013378 Listeria/Bacterioides repeat TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 1352 1393 1.4E-13 T 11-10-2018 IPR013378 Listeria/Bacterioides repeat TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 1195 1238 4.6E-9 T 11-10-2018 IPR013378 Listeria/Bacterioides repeat TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 1041 1082 4.6E-13 T 11-10-2018 IPR013378 Listeria/Bacterioides repeat TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 1115 1157 2.9E-13 T 11-10-2018 IPR013378 Listeria/Bacterioides repeat TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 1590 1634 8.4E-11 T 11-10-2018 IPR013378 Listeria/Bacterioides repeat TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 574 616 2.7E-14 T 11-10-2018 IPR013378 Listeria/Bacterioides repeat TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 1513 1554 1.2E-14 T 11-10-2018 IPR013378 Listeria/Bacterioides repeat TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 Gene3D G3DSA:2.60.40.2030 326 449 6.4E-6 T 11-10-2018 IPR038081 CalX-like domain superfamily TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 SUPERFAMILY SSF51126 1888 2234 1.95E-21 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 694 745 4.1E-5 T 11-10-2018 IPR013378 Listeria/Bacterioides repeat TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 781 842 1.5E-9 T 11-10-2018 IPR013378 Listeria/Bacterioides repeat TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 1321 1371 1.1E-7 T 11-10-2018 IPR013378 Listeria/Bacterioides repeat TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 619 684 3.1E-4 T 11-10-2018 IPR013378 Listeria/Bacterioides repeat TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 853 911 0.052 T 11-10-2018 IPR013378 Listeria/Bacterioides repeat TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 1010 1053 1.6E-8 T 11-10-2018 IPR013378 Listeria/Bacterioides repeat TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 1158 1211 0.0072 T 11-10-2018 IPR013378 Listeria/Bacterioides repeat TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 929 987 1.1E-6 T 11-10-2018 IPR013378 Listeria/Bacterioides repeat TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 543 612 4.4E-10 T 11-10-2018 IPR013378 Listeria/Bacterioides repeat TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 1556 1601 3.8E-7 T 11-10-2018 IPR013378 Listeria/Bacterioides repeat TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 1084 1151 3.7E-8 T 11-10-2018 IPR013378 Listeria/Bacterioides repeat TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 1395 1475 1.7E-5 T 11-10-2018 IPR013378 Listeria/Bacterioides repeat TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 1482 1550 2.3E-4 T 11-10-2018 IPR013378 Listeria/Bacterioides repeat TF3313_2189 fe4034f6b6cccbb876e7ab4124a9560c 2403 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 1240 1300 1.6E-6 T 11-10-2018 IPR013378 Listeria/Bacterioides repeat TF3313_1226 7bdb7fbe536cc621c758fd571fd1ef4f 198 SUPERFAMILY SSF116734 2 190 6.21E-36 T 11-10-2018 TF3313_1226 7bdb7fbe536cc621c758fd571fd1ef4f 198 Gene3D G3DSA:3.90.220.20 1 190 1.9E-30 T 11-10-2018 TF3313_1226 7bdb7fbe536cc621c758fd571fd1ef4f 198 Pfam PF01420 Type I restriction modification DNA specificity domain 2 175 1.8E-16 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 TF3313_1414 e7091c5677f81899b94c90f51e2027c7 97 Gene3D G3DSA:3.30.70.330 1 97 3.4E-30 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily TF3313_1414 e7091c5677f81899b94c90f51e2027c7 97 ProSitePatterns PS00050 Ribosomal protein L23 signature. 79 94 - T 11-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1414 e7091c5677f81899b94c90f51e2027c7 97 Pfam PF00276 Ribosomal protein L23 3 93 7.6E-32 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 TF3313_1414 e7091c5677f81899b94c90f51e2027c7 97 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 1 96 21.234 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 TF3313_1414 e7091c5677f81899b94c90f51e2027c7 97 SUPERFAMILY SSF54189 1 96 4.32E-29 T 11-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1883 aa1f83036754ff098579c051c3f2c4e3 365 Pfam PF06580 Histidine kinase 180 258 6.0E-20 T 11-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 TF3313_0347 632feea3b7423998dd4f5e5efef2dc5b 304 Gene3D G3DSA:3.40.50.150 13 303 3.1E-95 T 11-10-2018 TF3313_0347 632feea3b7423998dd4f5e5efef2dc5b 304 Pfam PF01795 MraW methylase family 8 304 2.0E-90 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 TF3313_0347 632feea3b7423998dd4f5e5efef2dc5b 304 SUPERFAMILY SSF81799 113 211 1.01E-28 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 TF3313_0347 632feea3b7423998dd4f5e5efef2dc5b 304 Gene3D G3DSA:1.10.150.170 111 212 3.1E-95 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 TF3313_0347 632feea3b7423998dd4f5e5efef2dc5b 304 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 9 304 34.833 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 TF3313_0347 632feea3b7423998dd4f5e5efef2dc5b 304 PIRSF PIRSF004486 3 304 1.9E-95 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 TF3313_0347 632feea3b7423998dd4f5e5efef2dc5b 304 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 8 304 1.1E-89 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 TF3313_0347 632feea3b7423998dd4f5e5efef2dc5b 304 SUPERFAMILY SSF53335 8 303 3.34E-42 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_0498 118b27f9f653265de24056ada822c9be 283 Gene3D G3DSA:1.10.3670.10 59 194 1.5E-78 T 11-10-2018 TF3313_0498 118b27f9f653265de24056ada822c9be 283 Pfam PF07313 Protein of unknown function (DUF1460) 56 274 4.6E-52 T 11-10-2018 IPR010846 Protein of unknown function DUF1460 TF3313_0498 118b27f9f653265de24056ada822c9be 283 Gene3D G3DSA:2.30.260.10 147 278 1.5E-78 T 11-10-2018 TF3313_0498 118b27f9f653265de24056ada822c9be 283 SUPERFAMILY SSF54001 28 281 9.22E-67 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TF3313_2616 44f2b44c786e96690e9d7e72f07f101b 129 Pfam PF04397 LytTr DNA-binding domain 12 115 4.0E-11 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 TF3313_2616 44f2b44c786e96690e9d7e72f07f101b 129 Gene3D G3DSA:2.40.50.1020 1 124 5.1E-10 T 11-10-2018 TF3313_2616 44f2b44c786e96690e9d7e72f07f101b 129 SMART SM00850 11 116 1.0E-12 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 TF3313_2374 73143a112c187f8c9f682452c8e5a482 112 Pfam PF01192 RNA polymerase Rpb6 27 100 2.7E-7 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 TF3313_2374 73143a112c187f8c9f682452c8e5a482 112 Gene3D G3DSA:3.90.940.10 15 111 3.6E-5 T 11-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 TF3313_1253 2093fed5910709c5c87a029a8b71a20a 345 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 7 325 1.8E-109 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 TF3313_1253 2093fed5910709c5c87a029a8b71a20a 345 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 268 296 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 TF3313_1253 2093fed5910709c5c87a029a8b71a20a 345 SUPERFAMILY SSF51161 34 315 2.95E-78 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily TF3313_1253 2093fed5910709c5c87a029a8b71a20a 345 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 166 180 0.025 T 11-10-2018 IPR001451 Hexapeptide repeat TF3313_1253 2093fed5910709c5c87a029a8b71a20a 345 Gene3D G3DSA:2.160.10.10 107 308 1.2E-63 T 11-10-2018 TF3313_1253 2093fed5910709c5c87a029a8b71a20a 345 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 89 2.7E-20 T 11-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 TF3313_1253 2093fed5910709c5c87a029a8b71a20a 345 Gene3D G3DSA:3.40.1390.10 1 106 3.4E-22 T 11-10-2018 TF3313_1253 2093fed5910709c5c87a029a8b71a20a 345 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 223 258 1.8E-6 T 11-10-2018 IPR001451 Hexapeptide repeat TF3313_1253 2093fed5910709c5c87a029a8b71a20a 345 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 128 162 2.0E-8 T 11-10-2018 IPR001451 Hexapeptide repeat TF3313_1253 2093fed5910709c5c87a029a8b71a20a 345 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 259 292 6.0E-6 T 11-10-2018 IPR001451 Hexapeptide repeat TF3313_1253 2093fed5910709c5c87a029a8b71a20a 345 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 4 326 35.433 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 TF3313_1430 05f29cfcb06370a866bf7d750a15e5f6 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 1.1E-26 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1430 05f29cfcb06370a866bf7d750a15e5f6 58 Gene3D G3DSA:3.30.1390.20 1 58 4.6E-27 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily TF3313_1430 05f29cfcb06370a866bf7d750a15e5f6 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 1.9E-19 T 11-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain TF3313_1430 05f29cfcb06370a866bf7d750a15e5f6 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 18.294 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1430 05f29cfcb06370a866bf7d750a15e5f6 58 SUPERFAMILY SSF55129 1 57 1.7E-21 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily TF3313_1430 05f29cfcb06370a866bf7d750a15e5f6 58 PIRSF PIRSF002211 1 58 6.1E-27 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2763 253ebe93186850c622b69dfbca2c1939 233 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 1 230 3.9E-38 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 TF3313_2763 253ebe93186850c622b69dfbca2c1939 233 SUPERFAMILY SSF75217 71 230 1.57E-39 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases TF3313_2763 253ebe93186850c622b69dfbca2c1939 233 Gene3D G3DSA:2.40.240.20 1 66 7.0E-24 T 11-10-2018 TF3313_2763 253ebe93186850c622b69dfbca2c1939 233 Gene3D G3DSA:3.40.1280.10 71 233 6.6E-49 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TF3313_2763 253ebe93186850c622b69dfbca2c1939 233 PIRSF PIRSF015601 1 233 6.0E-48 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 TF3313_2763 253ebe93186850c622b69dfbca2c1939 233 Pfam PF04452 RNA methyltransferase 15 229 1.1E-54 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 TF3313_2763 253ebe93186850c622b69dfbca2c1939 233 SUPERFAMILY SSF88697 1 65 1.51E-11 T 11-10-2018 IPR015947 PUA-like superfamily TF3313_1136 6498f806be7f9331f141d4fd4001af6d 465 SUPERFAMILY SSF55347 220 398 1.37E-19 T 11-10-2018 TF3313_1136 6498f806be7f9331f141d4fd4001af6d 465 Gene3D G3DSA:3.40.50.720 64 200 4.4E-26 T 11-10-2018 TF3313_1136 6498f806be7f9331f141d4fd4001af6d 465 SUPERFAMILY SSF51735 54 240 5.83E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_1136 6498f806be7f9331f141d4fd4001af6d 465 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 76 199 1.2E-10 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 TF3313_1136 6498f806be7f9331f141d4fd4001af6d 465 Gene3D G3DSA:3.30.360.10 209 435 1.4E-22 T 11-10-2018 TF3313_2088 7a7b83cebf1fd74e9f401f6e42b39ae6 405 Pfam PF07470 Glycosyl Hydrolase Family 88 78 400 2.3E-18 T 11-10-2018 IPR010905 Glycosyl hydrolase, family 88 TF3313_2088 7a7b83cebf1fd74e9f401f6e42b39ae6 405 SUPERFAMILY SSF48208 60 402 2.93E-101 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 TF3313_2088 7a7b83cebf1fd74e9f401f6e42b39ae6 405 Gene3D G3DSA:1.50.10.10 36 405 1.8E-140 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 TF3313_2270 ccf8802a516c9c15c6f9d76cddbf0498 1009 Pfam PF13715 CarboxypepD_reg-like domain 32 114 1.4E-15 T 11-10-2018 TF3313_2270 ccf8802a516c9c15c6f9d76cddbf0498 1009 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 203 233 3.4E-18 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_2270 ccf8802a516c9c15c6f9d76cddbf0498 1009 SUPERFAMILY SSF49464 30 112 2.62E-17 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_2270 ccf8802a516c9c15c6f9d76cddbf0498 1009 Gene3D G3DSA:2.60.40.1120 31 102 2.8E-7 T 11-10-2018 TF3313_2270 ccf8802a516c9c15c6f9d76cddbf0498 1009 SUPERFAMILY SSF56935 110 998 6.41E-97 T 11-10-2018 TF3313_2270 ccf8802a516c9c15c6f9d76cddbf0498 1009 Gene3D G3DSA:2.170.130.10 103 232 1.6E-28 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_2270 ccf8802a516c9c15c6f9d76cddbf0498 1009 Pfam PF07715 TonB-dependent Receptor Plug Domain 122 227 2.0E-21 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_2270 ccf8802a516c9c15c6f9d76cddbf0498 1009 Pfam PF00593 TonB dependent receptor 401 995 2.6E-33 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_2270 ccf8802a516c9c15c6f9d76cddbf0498 1009 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 31 1009 3.8E-299 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_2786 f558120a0b192be68fa2cc3a4aadc92c 551 ProSitePatterns PS00455 Putative AMP-binding domain signature. 178 189 - T 11-10-2018 IPR020845 AMP-binding, conserved site TF3313_2786 f558120a0b192be68fa2cc3a4aadc92c 551 Gene3D G3DSA:3.30.300.30 446 551 6.0E-6 T 11-10-2018 TF3313_2786 f558120a0b192be68fa2cc3a4aadc92c 551 Gene3D G3DSA:3.40.50.12780 2 445 2.4E-88 T 11-10-2018 TF3313_2786 f558120a0b192be68fa2cc3a4aadc92c 551 SUPERFAMILY SSF56801 5 547 4.19E-100 T 11-10-2018 TF3313_2786 f558120a0b192be68fa2cc3a4aadc92c 551 Pfam PF00501 AMP-binding enzyme 14 448 3.5E-85 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TF3313_0956 9569f04ed354433accfcd509a443c2bf 554 Gene3D G3DSA:1.25.40.390 26 553 1.5E-117 T 11-10-2018 TF3313_0956 9569f04ed354433accfcd509a443c2bf 554 SUPERFAMILY SSF48452 25 550 3.92E-115 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0956 9569f04ed354433accfcd509a443c2bf 554 Pfam PF12741 Susd and RagB outer membrane lipoprotein 362 550 1.0E-26 T 11-10-2018 IPR024302 SusD-like TF3313_0956 9569f04ed354433accfcd509a443c2bf 554 Pfam PF12741 Susd and RagB outer membrane lipoprotein 7 303 1.0E-40 T 11-10-2018 IPR024302 SusD-like TF3313_1394 48be53bda0ea8335994d6db1885fe79a 160 Pfam PF01475 Ferric uptake regulator family 21 140 1.7E-21 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 TF3313_1394 48be53bda0ea8335994d6db1885fe79a 160 Gene3D G3DSA:1.10.10.10 10 93 1.9E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_1394 48be53bda0ea8335994d6db1885fe79a 160 Gene3D G3DSA:3.30.1490.190 97 152 3.9E-12 T 11-10-2018 TF3313_1394 48be53bda0ea8335994d6db1885fe79a 160 SUPERFAMILY SSF46785 16 144 1.92E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TF3313_0589 9c6fe4172e1a2f4f099d61079388ae96 856 SUPERFAMILY SSF56399 656 850 6.48E-22 T 11-10-2018 TF3313_0589 9c6fe4172e1a2f4f099d61079388ae96 856 Gene3D G3DSA:3.90.176.10 627 854 4.7E-30 T 11-10-2018 TF3313_0589 9c6fe4172e1a2f4f099d61079388ae96 856 Pfam PF03496 ADP-ribosyltransferase exoenzyme 656 839 2.9E-13 T 11-10-2018 IPR003540 ADP ribosyltransferase GO:0005576|GO:0009405 TF3313_2014 be8630edada6fbcf258e72b23aafca94 414 Pfam PF07690 Major Facilitator Superfamily 15 368 4.0E-42 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TF3313_2014 be8630edada6fbcf258e72b23aafca94 414 Gene3D G3DSA:1.20.1250.20 215 413 4.0E-22 T 11-10-2018 TF3313_2014 be8630edada6fbcf258e72b23aafca94 414 SUPERFAMILY SSF103473 4 410 1.22E-64 T 11-10-2018 IPR036259 MFS transporter superfamily TF3313_2014 be8630edada6fbcf258e72b23aafca94 414 Gene3D G3DSA:1.20.1250.20 2 197 2.8E-38 T 11-10-2018 TF3313_2750 15ae91598c89f397763f7ec938c84af3 251 Pfam PF12804 MobA-like NTP transferase domain 24 157 1.3E-10 T 11-10-2018 IPR025877 MobA-like NTP transferase TF3313_2750 15ae91598c89f397763f7ec938c84af3 251 SUPERFAMILY SSF53448 25 250 1.22E-31 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_2750 15ae91598c89f397763f7ec938c84af3 251 Gene3D G3DSA:3.90.550.10 14 251 6.1E-31 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_0806 b854dfd773f368d94fdb47bac36b1bf9 608 Pfam PF01136 Peptidase family U32 79 305 4.2E-70 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 TF3313_0806 b854dfd773f368d94fdb47bac36b1bf9 608 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 TF3313_0806 b854dfd773f368d94fdb47bac36b1bf9 608 Pfam PF12392 Collagenase 382 494 1.1E-24 T 11-10-2018 IPR020988 Peptidase U32, collagenase TF3313_1862 a22bc04be97f3bb45d124430e21d3c27 267 Pfam PF01264 Chorismate synthase 1 253 7.9E-95 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TF3313_1862 a22bc04be97f3bb45d124430e21d3c27 267 SUPERFAMILY SSF103263 2 258 4.58E-92 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TF3313_1862 a22bc04be97f3bb45d124430e21d3c27 267 Gene3D G3DSA:3.60.150.10 1 264 1.2E-104 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TF3313_1862 a22bc04be97f3bb45d124430e21d3c27 267 TIGRFAM TIGR00033 aroC: chorismate synthase 2 257 2.3E-94 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TF3313_1862 a22bc04be97f3bb45d124430e21d3c27 267 ProSitePatterns PS00789 Chorismate synthase signature 3. 229 245 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TF3313_0784 e0c0a3f004354abb4d53fb3b1612a88b 1119 SUPERFAMILY SSF55486 740 823 6.01E-5 T 11-10-2018 TF3313_1307 1196718e3e64c232e866f8740e7528f4 228 Pfam PF00149 Calcineurin-like phosphoesterase 6 102 5.2E-4 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TF3313_1307 1196718e3e64c232e866f8740e7528f4 228 Gene3D G3DSA:3.60.21.10 2 216 2.0E-7 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like TF3313_1307 1196718e3e64c232e866f8740e7528f4 228 SUPERFAMILY SSF56300 6 212 3.34E-15 T 11-10-2018 TF3313_1922 a8d8f0eee83b81e408051cf2e8dddc6d 274 SUPERFAMILY SSF46934 1 54 7.74E-17 T 11-10-2018 IPR009060 UBA-like superfamily GO:0005515 TF3313_1922 a8d8f0eee83b81e408051cf2e8dddc6d 274 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TF3313_1922 a8d8f0eee83b81e408051cf2e8dddc6d 274 Gene3D G3DSA:3.30.479.20 56 147 1.6E-17 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 TF3313_1922 a8d8f0eee83b81e408051cf2e8dddc6d 274 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TF3313_1922 a8d8f0eee83b81e408051cf2e8dddc6d 274 Gene3D G3DSA:1.10.286.20 190 236 1.7E-35 T 11-10-2018 TF3313_1922 a8d8f0eee83b81e408051cf2e8dddc6d 274 Gene3D G3DSA:3.30.479.20 152 270 1.7E-35 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 TF3313_1922 a8d8f0eee83b81e408051cf2e8dddc6d 274 SUPERFAMILY SSF54713 56 270 3.6E-38 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 TF3313_1922 a8d8f0eee83b81e408051cf2e8dddc6d 274 Pfam PF00889 Elongation factor TS 70 271 2.6E-65 T 11-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 TF3313_1922 a8d8f0eee83b81e408051cf2e8dddc6d 274 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 270 4.0E-71 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TF3313_1922 a8d8f0eee83b81e408051cf2e8dddc6d 274 Gene3D G3DSA:1.10.8.10 3 55 2.4E-23 T 11-10-2018 TF3313_1922 a8d8f0eee83b81e408051cf2e8dddc6d 274 Hamap MF_00050 Elongation factor Ts [tsf]. 1 274 59.467 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TF3313_1135 36eba9f400643e8a5367bf2a3fb38498 312 SUPERFAMILY SSF51658 50 306 5.76E-42 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily TF3313_1135 36eba9f400643e8a5367bf2a3fb38498 312 Pfam PF01261 Xylose isomerase-like TIM barrel 69 260 8.2E-21 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain TF3313_1135 36eba9f400643e8a5367bf2a3fb38498 312 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 3 26 1.7E-6 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal TF3313_1135 36eba9f400643e8a5367bf2a3fb38498 312 Gene3D G3DSA:3.20.20.150 47 312 2.5E-61 T 11-10-2018 TF3313_2470 ffd6c0dffb72d0c6a09376ed15051582 111 Gene3D G3DSA:1.10.1220.10 72 111 2.1E-6 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 TF3313_2470 ffd6c0dffb72d0c6a09376ed15051582 111 SUPERFAMILY SSF47598 70 110 1.37E-8 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 TF3313_2470 ffd6c0dffb72d0c6a09376ed15051582 111 SUPERFAMILY SSF143100 2 77 6.54E-8 T 11-10-2018 IPR035069 TTHA1013/TTHA0281-like TF3313_2470 ffd6c0dffb72d0c6a09376ed15051582 111 Pfam PF05534 HicB family 56 106 8.2E-18 T 11-10-2018 IPR008651 Uncharacterised protein family HicB TF3313_2118 76d569c7ec63a4771debc75b98e45169 344 Pfam PF03590 Aspartate-ammonia ligase 19 254 2.1E-101 T 11-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 TF3313_2118 76d569c7ec63a4771debc75b98e45169 344 SUPERFAMILY SSF55681 19 336 8.45E-89 T 11-10-2018 TF3313_2118 76d569c7ec63a4771debc75b98e45169 344 PIRSF PIRSF001555 7 343 7.2E-144 T 11-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 TF3313_2118 76d569c7ec63a4771debc75b98e45169 344 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 11 340 46.748 T 11-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 TF3313_2118 76d569c7ec63a4771debc75b98e45169 344 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 21 336 1.7E-110 T 11-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 TF3313_2118 76d569c7ec63a4771debc75b98e45169 344 Gene3D G3DSA:3.30.930.10 14 340 2.9E-138 T 11-10-2018 TF3313_1830 24c6efe962d4294784f43050630e9e3d 285 Pfam PF00535 Glycosyl transferase family 2 4 140 7.5E-24 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TF3313_1830 24c6efe962d4294784f43050630e9e3d 285 SUPERFAMILY SSF53448 1 267 1.88E-52 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_1830 24c6efe962d4294784f43050630e9e3d 285 Gene3D G3DSA:3.90.550.10 1 226 6.9E-50 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_1223 b911363a42a884636468e7f89705e5ff 337 PIRSF PIRSF015268 2 337 1.3E-136 T 11-10-2018 IPR011204 Virulence protein RhuM-like TF3313_1223 b911363a42a884636468e7f89705e5ff 337 Pfam PF13310 Virulence protein RhuM family 66 312 1.3E-107 T 11-10-2018 IPR011204 Virulence protein RhuM-like TF3313_0442 425d9e3af88bacf8fa96359dd7e99414 430 Pfam PF00579 tRNA synthetases class I (W and Y) 28 325 7.8E-79 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_0442 425d9e3af88bacf8fa96359dd7e99414 430 SUPERFAMILY SSF52374 1 325 1.93E-96 T 11-10-2018 TF3313_0442 425d9e3af88bacf8fa96359dd7e99414 430 Gene3D G3DSA:3.10.290.10 332 429 9.0E-24 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TF3313_0442 425d9e3af88bacf8fa96359dd7e99414 430 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 1 429 43.235 T 11-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 TF3313_0442 425d9e3af88bacf8fa96359dd7e99414 430 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 428 1.4E-121 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 TF3313_0442 425d9e3af88bacf8fa96359dd7e99414 430 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 37 47 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_0442 425d9e3af88bacf8fa96359dd7e99414 430 Gene3D G3DSA:1.10.240.10 225 331 2.0E-33 T 11-10-2018 TF3313_0442 425d9e3af88bacf8fa96359dd7e99414 430 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 218 230 1.9E-30 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 TF3313_0442 425d9e3af88bacf8fa96359dd7e99414 430 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 185 207 1.9E-30 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 TF3313_0442 425d9e3af88bacf8fa96359dd7e99414 430 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 41 63 1.9E-30 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 TF3313_0442 425d9e3af88bacf8fa96359dd7e99414 430 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 164 179 1.9E-30 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 TF3313_0442 425d9e3af88bacf8fa96359dd7e99414 430 Gene3D G3DSA:3.40.50.620 1 224 1.1E-90 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_0442 425d9e3af88bacf8fa96359dd7e99414 430 SUPERFAMILY SSF55174 333 428 2.19E-14 T 11-10-2018 TF3313_2000 ca76e8b0ebfb297702033c001ed281a5 227 SUPERFAMILY SSF53067 1 98 4.66E-21 T 11-10-2018 TF3313_2000 ca76e8b0ebfb297702033c001ed281a5 227 SUPERFAMILY SSF53067 111 211 1.27E-13 T 11-10-2018 TF3313_2000 ca76e8b0ebfb297702033c001ed281a5 227 Gene3D G3DSA:3.30.420.40 3 214 5.4E-57 T 11-10-2018 TF3313_2000 ca76e8b0ebfb297702033c001ed281a5 227 Gene3D G3DSA:3.30.420.40 92 182 5.4E-57 T 11-10-2018 TF3313_2000 ca76e8b0ebfb297702033c001ed281a5 227 Pfam PF00814 Glycoprotease family 21 143 1.8E-19 T 11-10-2018 IPR000905 Gcp-like domain TF3313_2000 ca76e8b0ebfb297702033c001ed281a5 227 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 213 3.5E-45 T 11-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 TF3313_1834 b3aab6328936bb125c87f777a8ef75f9 157 PIRSF PIRSF004505 1 156 6.0E-51 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 TF3313_1834 b3aab6328936bb125c87f777a8ef75f9 157 Pfam PF02590 Predicted SPOUT methyltransferase 1 155 3.0E-52 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 TF3313_1834 b3aab6328936bb125c87f777a8ef75f9 157 Gene3D G3DSA:3.40.1280.10 1 156 8.8E-54 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TF3313_1834 b3aab6328936bb125c87f777a8ef75f9 157 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 156 26.885 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 TF3313_1834 b3aab6328936bb125c87f777a8ef75f9 157 SUPERFAMILY SSF75217 1 154 9.94E-49 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases TF3313_1009 797b4f4b746edf86a730ff36af14a9c3 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 63 4.2E-16 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TF3313_1009 797b4f4b746edf86a730ff36af14a9c3 159 SUPERFAMILY SSF52374 3 157 6.97E-44 T 11-10-2018 TF3313_1009 797b4f4b746edf86a730ff36af14a9c3 159 Pfam PF01467 Cytidylyltransferase-like 7 134 3.2E-17 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TF3313_1009 797b4f4b746edf86a730ff36af14a9c3 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 87 103 7.6E-35 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TF3313_1009 797b4f4b746edf86a730ff36af14a9c3 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 7.6E-35 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TF3313_1009 797b4f4b746edf86a730ff36af14a9c3 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 51 75 7.6E-35 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TF3313_1009 797b4f4b746edf86a730ff36af14a9c3 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 22 43 7.6E-35 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TF3313_1009 797b4f4b746edf86a730ff36af14a9c3 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 4 22 7.6E-35 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TF3313_1009 797b4f4b746edf86a730ff36af14a9c3 159 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 157 1.0E-53 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TF3313_1009 797b4f4b746edf86a730ff36af14a9c3 159 Gene3D G3DSA:3.40.50.620 1 159 1.9E-52 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_1009 797b4f4b746edf86a730ff36af14a9c3 159 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 4 159 31.136 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TF3313_2210 b9cd01a54d095451019695acbb4d4b05 250 Gene3D G3DSA:3.40.1280.10 78 244 2.7E-48 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TF3313_2210 b9cd01a54d095451019695acbb4d4b05 250 Gene3D G3DSA:3.30.1330.30 1 75 1.6E-10 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like TF3313_2210 b9cd01a54d095451019695acbb4d4b05 250 SUPERFAMILY SSF75217 68 246 1.96E-45 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases TF3313_2210 b9cd01a54d095451019695acbb4d4b05 250 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 5 242 6.8E-60 T 11-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 TF3313_2210 b9cd01a54d095451019695acbb4d4b05 250 SMART SM00967 6 80 2.4E-17 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 TF3313_2210 b9cd01a54d095451019695acbb4d4b05 250 SUPERFAMILY SSF55315 2 76 3.88E-13 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like TF3313_2210 b9cd01a54d095451019695acbb4d4b05 250 Pfam PF00588 SpoU rRNA Methylase family 97 237 3.4E-37 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 TF3313_2210 b9cd01a54d095451019695acbb4d4b05 250 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 7 79 8.5E-17 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 TF3313_0112 82c1861e6a69822ec388900b2cacfdb6 499 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 46 155 6.6E-42 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 TF3313_0112 82c1861e6a69822ec388900b2cacfdb6 499 TIGRFAM TIGR01316 gltA: glutamate synthase (NADPH), homotetrameric 44 484 1.3E-166 T 11-10-2018 IPR006004 Glutamate synthase (NADPH), homotetrameric KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 TF3313_0112 82c1861e6a69822ec388900b2cacfdb6 499 SUPERFAMILY SSF46548 23 178 1.05E-34 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TF3313_0112 82c1861e6a69822ec388900b2cacfdb6 499 PRINTS PR00419 Adrenodoxin reductase family signature 309 323 8.1E-21 T 11-10-2018 TF3313_0112 82c1861e6a69822ec388900b2cacfdb6 499 PRINTS PR00419 Adrenodoxin reductase family signature 169 191 8.1E-21 T 11-10-2018 TF3313_0112 82c1861e6a69822ec388900b2cacfdb6 499 PRINTS PR00419 Adrenodoxin reductase family signature 234 244 8.1E-21 T 11-10-2018 TF3313_0112 82c1861e6a69822ec388900b2cacfdb6 499 PRINTS PR00419 Adrenodoxin reductase family signature 343 356 8.1E-21 T 11-10-2018 TF3313_0112 82c1861e6a69822ec388900b2cacfdb6 499 PRINTS PR00419 Adrenodoxin reductase family signature 192 205 8.1E-21 T 11-10-2018 TF3313_0112 82c1861e6a69822ec388900b2cacfdb6 499 Gene3D G3DSA:1.10.1060.10 15 166 8.6E-43 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TF3313_0112 82c1861e6a69822ec388900b2cacfdb6 499 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 169 473 3.7E-32 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TF3313_0112 82c1861e6a69822ec388900b2cacfdb6 499 Gene3D G3DSA:3.50.50.60 304 498 2.1E-26 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TF3313_0112 82c1861e6a69822ec388900b2cacfdb6 499 Gene3D G3DSA:3.50.50.60 167 302 2.1E-34 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TF3313_0112 82c1861e6a69822ec388900b2cacfdb6 499 SUPERFAMILY SSF51971 167 419 8.83E-63 T 11-10-2018 TF3313_2367 77e7d831b79d113f4d4aa8d15da3fba5 463 Pfam PF02589 LUD domain 65 279 4.1E-42 T 11-10-2018 IPR003741 LUD domain TF3313_2367 77e7d831b79d113f4d4aa8d15da3fba5 463 Pfam PF11870 Domain of unknown function (DUF3390) 384 452 6.8E-7 T 11-10-2018 IPR024569 4Fe-4S binding protein, C-terminal TF3313_2367 77e7d831b79d113f4d4aa8d15da3fba5 463 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 352 363 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TF3313_2367 77e7d831b79d113f4d4aa8d15da3fba5 463 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 303 314 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TF3313_2367 77e7d831b79d113f4d4aa8d15da3fba5 463 SUPERFAMILY SSF100950 60 284 5.02E-28 T 11-10-2018 IPR037171 NagB/RpiA transferase-like TF3313_2367 77e7d831b79d113f4d4aa8d15da3fba5 463 Pfam PF13183 4Fe-4S dicluster domain 301 364 1.1E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TF3313_2367 77e7d831b79d113f4d4aa8d15da3fba5 463 SUPERFAMILY SSF54862 280 388 1.0E-13 T 11-10-2018 TF3313_2367 77e7d831b79d113f4d4aa8d15da3fba5 463 Gene3D G3DSA:1.10.1060.10 285 384 3.4E-7 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TF3313_0439 d932428c810bae23b8d7a200eeb452f4 373 Pfam PF14289 Domain of unknown function (DUF4369) 14 118 1.9E-5 T 11-10-2018 IPR025380 Domain of unknown function DUF4369 TF3313_0439 d932428c810bae23b8d7a200eeb452f4 373 SUPERFAMILY SSF52833 224 359 4.37E-23 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TF3313_0439 d932428c810bae23b8d7a200eeb452f4 373 Pfam PF00578 AhpC/TSA family 231 349 5.0E-17 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TF3313_0439 d932428c810bae23b8d7a200eeb452f4 373 Gene3D G3DSA:3.40.30.10 226 366 3.0E-30 T 11-10-2018 TF3313_2560 21fadc5485b7109a0141555af02242e5 1154 SUPERFAMILY SSF49464 140 219 2.22E-19 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_2560 21fadc5485b7109a0141555af02242e5 1154 Pfam PF13715 CarboxypepD_reg-like domain 141 221 2.6E-18 T 11-10-2018 TF3313_2560 21fadc5485b7109a0141555af02242e5 1154 Gene3D G3DSA:2.170.130.10 210 340 4.4E-26 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_2560 21fadc5485b7109a0141555af02242e5 1154 Pfam PF07715 TonB-dependent Receptor Plug Domain 229 335 1.4E-17 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_2560 21fadc5485b7109a0141555af02242e5 1154 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 140 1154 4.7E-283 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_2560 21fadc5485b7109a0141555af02242e5 1154 Gene3D G3DSA:2.60.40.1120 140 209 3.1E-7 T 11-10-2018 TF3313_2560 21fadc5485b7109a0141555af02242e5 1154 Pfam PF00593 TonB dependent receptor 541 1153 4.3E-37 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_2560 21fadc5485b7109a0141555af02242e5 1154 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 311 341 1.2E-17 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_2560 21fadc5485b7109a0141555af02242e5 1154 SUPERFAMILY SSF56935 217 1154 7.69E-96 T 11-10-2018 TF3313_2840 be6d0394025349ba0746590105ad9413 260 Pfam PF11363 Protein of unknown function (DUF3164) 102 256 8.0E-7 T 11-10-2018 IPR021505 Bacteriophage B3, Orf6 TF3313_1415 39b5944c0ec19922c87835fa1ee0c1b8 274 SUPERFAMILY SSF50104 126 271 4.33E-55 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily TF3313_1415 39b5944c0ec19922c87835fa1ee0c1b8 274 PIRSF PIRSF002158 13 274 2.9E-93 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1415 39b5944c0ec19922c87835fa1ee0c1b8 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 2.0E-29 T 11-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1415 39b5944c0ec19922c87835fa1ee0c1b8 274 SMART SM01382 124 251 6.2E-82 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 TF3313_1415 39b5944c0ec19922c87835fa1ee0c1b8 274 SMART SM01383 42 118 1.1E-44 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1415 39b5944c0ec19922c87835fa1ee0c1b8 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 44.945 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 TF3313_1415 39b5944c0ec19922c87835fa1ee0c1b8 274 SUPERFAMILY SSF50249 3 123 3.43E-47 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TF3313_1415 39b5944c0ec19922c87835fa1ee0c1b8 274 Gene3D G3DSA:2.30.30.30 118 195 1.8E-32 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 TF3313_1415 39b5944c0ec19922c87835fa1ee0c1b8 274 Gene3D G3DSA:4.10.950.10 196 274 1.0E-28 T 11-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1415 39b5944c0ec19922c87835fa1ee0c1b8 274 Gene3D G3DSA:2.40.50.140 1 114 8.8E-45 T 11-10-2018 TF3313_1415 39b5944c0ec19922c87835fa1ee0c1b8 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 246 4.5E-52 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 TF3313_1415 39b5944c0ec19922c87835fa1ee0c1b8 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 11-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1415 39b5944c0ec19922c87835fa1ee0c1b8 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 274 9.9E-118 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 TF3313_0065 dac44fb6bf489eb0844f304ccc014f3f 161 SUPERFAMILY SSF53098 26 106 3.19E-20 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TF3313_0065 dac44fb6bf489eb0844f304ccc014f3f 161 Pfam PF01609 Transposase DDE domain 32 101 2.0E-14 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 TF3313_2655 5ff01f12daa679dbc7c7caa2bff06f4b 506 Gene3D G3DSA:3.40.720.10 204 506 3.0E-66 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 TF3313_2655 5ff01f12daa679dbc7c7caa2bff06f4b 506 SUPERFAMILY SSF53649 208 493 2.43E-24 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 TF3313_2655 5ff01f12daa679dbc7c7caa2bff06f4b 506 Pfam PF00884 Sulfatase 210 491 6.4E-37 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 TF3313_0723 fca3b24c53f524ab597bb0420232facd 300 Pfam PF02195 ParB-like nuclease domain 33 122 5.2E-23 T 11-10-2018 IPR003115 ParB/Sulfiredoxin TF3313_0723 fca3b24c53f524ab597bb0420232facd 300 SUPERFAMILY SSF109709 115 222 1.94E-34 T 11-10-2018 TF3313_0723 fca3b24c53f524ab597bb0420232facd 300 SUPERFAMILY SSF110849 33 124 3.92E-26 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily TF3313_0723 fca3b24c53f524ab597bb0420232facd 300 SMART SM00470 32 122 7.4E-29 T 11-10-2018 IPR003115 ParB/Sulfiredoxin TF3313_0723 fca3b24c53f524ab597bb0420232facd 300 Gene3D G3DSA:1.10.10.2830 109 223 1.2E-36 T 11-10-2018 TF3313_0723 fca3b24c53f524ab597bb0420232facd 300 Gene3D G3DSA:3.90.1530.30 45 107 2.0E-23 T 11-10-2018 TF3313_0723 fca3b24c53f524ab597bb0420232facd 300 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 30 208 1.5E-52 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 TF3313_0948 6742951225aadfc0e696a274e557e188 689 Gene3D G3DSA:1.10.150.280 55 122 2.9E-6 T 11-10-2018 TF3313_0948 6742951225aadfc0e696a274e557e188 689 SUPERFAMILY SSF47781 53 124 6.15E-13 T 11-10-2018 IPR010994 RuvA domain 2-like TF3313_0948 6742951225aadfc0e696a274e557e188 689 Pfam PF12836 Helix-hairpin-helix motif 60 121 4.5E-12 T 11-10-2018 TF3313_0645 791f9470265b8c8b9342900f13c9d64a 952 SUPERFAMILY SSF63411 6 275 1.9E-39 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TF3313_0645 791f9470265b8c8b9342900f13c9d64a 952 SUPERFAMILY SSF63411 504 690 1.68E-11 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TF3313_0645 791f9470265b8c8b9342900f13c9d64a 952 Gene3D G3DSA:3.30.830.10 740 932 4.9E-17 T 11-10-2018 TF3313_0645 791f9470265b8c8b9342900f13c9d64a 952 Pfam PF05193 Peptidase M16 inactive domain 234 405 6.0E-13 T 11-10-2018 IPR007863 Peptidase M16, C-terminal TF3313_0645 791f9470265b8c8b9342900f13c9d64a 952 SUPERFAMILY SSF63411 740 933 7.16E-18 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TF3313_0645 791f9470265b8c8b9342900f13c9d64a 952 Gene3D G3DSA:3.30.830.10 289 468 1.2E-26 T 11-10-2018 TF3313_0645 791f9470265b8c8b9342900f13c9d64a 952 SUPERFAMILY SSF63411 293 466 2.0E-23 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TF3313_0645 791f9470265b8c8b9342900f13c9d64a 952 Pfam PF00675 Insulinase (Peptidase family M16) 31 76 1.2E-5 T 11-10-2018 IPR011765 Peptidase M16, N-terminal TF3313_1978 97cedab57d896ab52cd5ad95f08a246f 316 SUPERFAMILY SSF53448 1 244 1.88E-35 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_1978 97cedab57d896ab52cd5ad95f08a246f 316 Pfam PF00535 Glycosyl transferase family 2 5 167 6.1E-31 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TF3313_1978 97cedab57d896ab52cd5ad95f08a246f 316 Gene3D G3DSA:3.90.550.10 1 226 1.2E-32 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_0321 6af365bf5513389188540383e47d151e 388 Gene3D G3DSA:2.120.10.30 73 289 1.5E-6 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TF3313_0321 6af365bf5513389188540383e47d151e 388 SUPERFAMILY SSF75011 57 209 4.97E-8 T 11-10-2018 TF3313_0321 6af365bf5513389188540383e47d151e 388 Pfam PF17170 6-bladed beta-propeller 14 325 2.4E-39 T 11-10-2018 TF3313_2481 5cb6c6989e7100079c6b47eb33274aa7 358 SUPERFAMILY SSF52518 4 247 6.96E-58 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold TF3313_2481 5cb6c6989e7100079c6b47eb33274aa7 358 Gene3D G3DSA:3.40.50.920 243 357 4.8E-24 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TF3313_2481 5cb6c6989e7100079c6b47eb33274aa7 358 SUPERFAMILY SSF52922 247 355 2.36E-27 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TF3313_2481 5cb6c6989e7100079c6b47eb33274aa7 358 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 15 199 1.3E-47 T 11-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 TF3313_2481 5cb6c6989e7100079c6b47eb33274aa7 358 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 255 349 1.9E-23 T 11-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II TF3313_2481 5cb6c6989e7100079c6b47eb33274aa7 358 Gene3D G3DSA:3.40.50.970 1 189 8.3E-58 T 11-10-2018 TF3313_0651 39d8bd6cf23a36bdc609d77f896df210 635 PRINTS PR00301 70kDa heat shock protein signature 359 379 4.1E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TF3313_0651 39d8bd6cf23a36bdc609d77f896df210 635 PRINTS PR00301 70kDa heat shock protein signature 196 206 4.1E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TF3313_0651 39d8bd6cf23a36bdc609d77f896df210 635 PRINTS PR00301 70kDa heat shock protein signature 328 344 4.1E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TF3313_0651 39d8bd6cf23a36bdc609d77f896df210 635 PRINTS PR00301 70kDa heat shock protein signature 31 43 4.1E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TF3313_0651 39d8bd6cf23a36bdc609d77f896df210 635 PRINTS PR00301 70kDa heat shock protein signature 3 16 4.1E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TF3313_0651 39d8bd6cf23a36bdc609d77f896df210 635 PRINTS PR00301 70kDa heat shock protein signature 463 479 4.1E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TF3313_0651 39d8bd6cf23a36bdc609d77f896df210 635 PRINTS PR00301 70kDa heat shock protein signature 382 401 4.1E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TF3313_0651 39d8bd6cf23a36bdc609d77f896df210 635 PRINTS PR00301 70kDa heat shock protein signature 54 62 4.1E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TF3313_0651 39d8bd6cf23a36bdc609d77f896df210 635 PRINTS PR00301 70kDa heat shock protein signature 136 156 4.1E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TF3313_0651 39d8bd6cf23a36bdc609d77f896df210 635 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 634 37.365 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 TF3313_0651 39d8bd6cf23a36bdc609d77f896df210 635 SUPERFAMILY SSF100920 378 534 4.97E-62 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 TF3313_0651 39d8bd6cf23a36bdc609d77f896df210 635 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 TF3313_0651 39d8bd6cf23a36bdc609d77f896df210 635 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 190 203 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 TF3313_0651 39d8bd6cf23a36bdc609d77f896df210 635 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 331 345 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 TF3313_0651 39d8bd6cf23a36bdc609d77f896df210 635 Gene3D G3DSA:3.90.640.10 223 310 7.1E-158 T 11-10-2018 TF3313_0651 39d8bd6cf23a36bdc609d77f896df210 635 Gene3D G3DSA:3.30.420.40 178 360 7.1E-158 T 11-10-2018 TF3313_0651 39d8bd6cf23a36bdc609d77f896df210 635 SUPERFAMILY SSF53067 4 182 3.76E-64 T 11-10-2018 TF3313_0651 39d8bd6cf23a36bdc609d77f896df210 635 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 597 7.6E-298 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 TF3313_0651 39d8bd6cf23a36bdc609d77f896df210 635 Gene3D G3DSA:3.30.420.40 5 373 7.1E-158 T 11-10-2018 TF3313_0651 39d8bd6cf23a36bdc609d77f896df210 635 Pfam PF00012 Hsp70 protein 4 597 5.5E-263 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TF3313_0651 39d8bd6cf23a36bdc609d77f896df210 635 SUPERFAMILY SSF53067 186 376 1.23E-65 T 11-10-2018 TF3313_0651 39d8bd6cf23a36bdc609d77f896df210 635 Gene3D G3DSA:2.60.34.10 377 517 4.7E-65 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 TF3313_0651 39d8bd6cf23a36bdc609d77f896df210 635 Gene3D G3DSA:1.20.1270.10 518 604 9.2E-24 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 TF3313_0651 39d8bd6cf23a36bdc609d77f896df210 635 SUPERFAMILY SSF100934 528 602 5.89E-5 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 TF3313_1206 ff4ad66090f97999b209b65ba1fa37c5 1006 Pfam PF13715 CarboxypepD_reg-like domain 25 106 2.9E-16 T 11-10-2018 TF3313_1206 ff4ad66090f97999b209b65ba1fa37c5 1006 Pfam PF07715 TonB-dependent Receptor Plug Domain 115 239 1.1E-20 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_1206 ff4ad66090f97999b209b65ba1fa37c5 1006 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 215 245 1.2E-15 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_1206 ff4ad66090f97999b209b65ba1fa37c5 1006 SUPERFAMILY SSF56935 103 1003 9.16E-78 T 11-10-2018 TF3313_1206 ff4ad66090f97999b209b65ba1fa37c5 1006 Gene3D G3DSA:2.60.40.1120 24 95 1.8E-7 T 11-10-2018 TF3313_1206 ff4ad66090f97999b209b65ba1fa37c5 1006 SUPERFAMILY SSF49464 24 104 1.29E-16 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_1206 ff4ad66090f97999b209b65ba1fa37c5 1006 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 23 1006 1.7E-207 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_1206 ff4ad66090f97999b209b65ba1fa37c5 1006 Pfam PF00593 TonB dependent receptor 401 1003 2.8E-17 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_1206 ff4ad66090f97999b209b65ba1fa37c5 1006 Gene3D G3DSA:2.170.130.10 96 244 1.1E-31 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_1622 cea6bae686d9aa23e4a80765f169738d 783 SUPERFAMILY SSF56935 54 779 6.41E-97 T 11-10-2018 TF3313_1622 cea6bae686d9aa23e4a80765f169738d 783 Pfam PF00593 TonB dependent receptor 308 779 1.6E-44 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_1622 cea6bae686d9aa23e4a80765f169738d 783 Gene3D G3DSA:2.170.130.10 65 188 1.1E-19 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_1622 cea6bae686d9aa23e4a80765f169738d 783 Pfam PF07715 TonB-dependent Receptor Plug Domain 80 180 3.9E-9 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_1622 cea6bae686d9aa23e4a80765f169738d 783 Gene3D G3DSA:2.40.170.20 194 782 1.3E-81 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_2020 7e947c79dd05ec814c029dab6a46b045 490 Pfam PF03929 PepSY-associated TM region 155 470 3.4E-11 T 11-10-2018 IPR005625 PepSY-associated TM protein TF3313_2025 3cf718449ec5a9f1028f8b393a85d96d 786 Gene3D G3DSA:2.170.130.10 131 234 2.2E-16 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_2025 3cf718449ec5a9f1028f8b393a85d96d 786 SUPERFAMILY SSF49464 25 107 2.62E-15 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_2025 3cf718449ec5a9f1028f8b393a85d96d 786 Pfam PF13715 CarboxypepD_reg-like domain 27 110 2.5E-18 T 11-10-2018 TF3313_2025 3cf718449ec5a9f1028f8b393a85d96d 786 Gene3D G3DSA:2.60.40.1120 27 100 5.9E-14 T 11-10-2018 TF3313_2025 3cf718449ec5a9f1028f8b393a85d96d 786 Pfam PF07715 TonB-dependent Receptor Plug Domain 137 223 9.6E-14 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_2025 3cf718449ec5a9f1028f8b393a85d96d 786 SUPERFAMILY SSF56935 95 781 3.36E-61 T 11-10-2018 TF3313_2025 3cf718449ec5a9f1028f8b393a85d96d 786 Gene3D G3DSA:2.40.170.20 354 783 1.2E-34 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_0254 429337d79a9d8cd7cf6bb92fff878166 501 SUPERFAMILY SSF48452 151 252 9.34E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0254 429337d79a9d8cd7cf6bb92fff878166 501 Gene3D G3DSA:1.25.40.10 1 144 8.9E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0254 429337d79a9d8cd7cf6bb92fff878166 501 Gene3D G3DSA:1.25.40.10 146 294 8.5E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0254 429337d79a9d8cd7cf6bb92fff878166 501 SUPERFAMILY SSF48452 5 155 6.26E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0254 429337d79a9d8cd7cf6bb92fff878166 501 Gene3D G3DSA:1.10.10.10 415 501 3.9E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_0254 429337d79a9d8cd7cf6bb92fff878166 501 SMART SM00421 441 498 0.0035 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TF3313_0254 429337d79a9d8cd7cf6bb92fff878166 501 Pfam PF13424 Tetratricopeptide repeat 69 140 3.5E-8 T 11-10-2018 TF3313_0254 429337d79a9d8cd7cf6bb92fff878166 501 SUPERFAMILY SSF46894 434 498 1.05E-8 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TF3313_0254 429337d79a9d8cd7cf6bb92fff878166 501 SMART SM00028 109 142 1.9 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_0254 429337d79a9d8cd7cf6bb92fff878166 501 SMART SM00028 186 219 45.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_0254 429337d79a9d8cd7cf6bb92fff878166 501 SMART SM00028 69 102 250.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_0254 429337d79a9d8cd7cf6bb92fff878166 501 SMART SM00028 30 63 100.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1359 f1e38628cb7da23d8500e83fbe16ee3b 260 Pfam PF01012 Electron transfer flavoprotein domain 23 204 3.6E-48 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 TF3313_1359 f1e38628cb7da23d8500e83fbe16ee3b 260 PIRSF PIRSF000090 1 260 3.3E-91 T 11-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 TF3313_1359 f1e38628cb7da23d8500e83fbe16ee3b 260 Gene3D G3DSA:3.40.50.620 1 258 3.1E-95 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_1359 f1e38628cb7da23d8500e83fbe16ee3b 260 SUPERFAMILY SSF52402 1 256 3.42E-79 T 11-10-2018 TF3313_1359 f1e38628cb7da23d8500e83fbe16ee3b 260 SMART SM00893 22 212 2.3E-61 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 TF3313_2651 1f6fce07a61f94c3d0334f8a15cf9687 1001 Pfam PF13715 CarboxypepD_reg-like domain 26 112 3.3E-16 T 11-10-2018 TF3313_2651 1f6fce07a61f94c3d0334f8a15cf9687 1001 Gene3D G3DSA:2.170.130.10 101 237 7.5E-15 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_2651 1f6fce07a61f94c3d0334f8a15cf9687 1001 SUPERFAMILY SSF49464 24 110 6.67E-10 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_2651 1f6fce07a61f94c3d0334f8a15cf9687 1001 Pfam PF07715 TonB-dependent Receptor Plug Domain 122 227 2.3E-10 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_2651 1f6fce07a61f94c3d0334f8a15cf9687 1001 SUPERFAMILY SSF56935 108 999 1.1E-45 T 11-10-2018 TF3313_2651 1f6fce07a61f94c3d0334f8a15cf9687 1001 Pfam PF00593 TonB dependent receptor 298 1000 1.0E-13 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_1643 ad9af11a695a5e89191e89a58a9f57d4 40 Pfam PF14899 Domain of unknown function (DUF4492) 1 32 2.1E-8 T 11-10-2018 IPR027853 Protein of unknown function DUF4492 TF3313_2925 af8da712f2f301e5348e50c0f0c2270d 119 SUPERFAMILY SSF81301 28 117 1.64E-13 T 11-10-2018 TF3313_2925 af8da712f2f301e5348e50c0f0c2270d 119 Gene3D G3DSA:3.30.460.10 19 113 1.2E-17 T 11-10-2018 TF3313_2925 af8da712f2f301e5348e50c0f0c2270d 119 Pfam PF01909 Nucleotidyltransferase domain 27 106 5.5E-12 T 11-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 TF3313_0049 1ba5a4b3e3bea3a65c90201c1fc97b9f 593 Pfam PF03572 Peptidase family S41 402 564 3.8E-11 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 TF3313_0049 1ba5a4b3e3bea3a65c90201c1fc97b9f 593 Gene3D G3DSA:2.30.42.10 278 375 7.0E-6 T 11-10-2018 TF3313_0049 1ba5a4b3e3bea3a65c90201c1fc97b9f 593 SUPERFAMILY SSF52096 208 592 3.48E-29 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TF3313_0049 1ba5a4b3e3bea3a65c90201c1fc97b9f 593 Gene3D G3DSA:3.90.226.10 387 593 4.5E-17 T 11-10-2018 TF3313_0049 1ba5a4b3e3bea3a65c90201c1fc97b9f 593 Gene3D G3DSA:3.30.750.44 208 276 5.4E-6 T 11-10-2018 TF3313_1783 ed402188e2f57872e48f3f1cc05c2bbf 62 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 6 59 2.1E-17 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TF3313_1783 ed402188e2f57872e48f3f1cc05c2bbf 62 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 5 59 6.2E-13 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 TF3313_1783 ed402188e2f57872e48f3f1cc05c2bbf 62 Hamap MF_00422 Protein translocase subunit SecE [secE]. 2 58 10.599 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TF3313_1783 ed402188e2f57872e48f3f1cc05c2bbf 62 Gene3D G3DSA:1.20.5.1030 1 59 6.5E-15 T 11-10-2018 IPR038379 SecE superfamily TF3313_1154 dc4bb67281929f3565b48535252c38c2 381 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 356 376 2.3E-5 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TF3313_1154 dc4bb67281929f3565b48535252c38c2 381 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 73 93 2.3E-5 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TF3313_1154 dc4bb67281929f3565b48535252c38c2 381 Pfam PF13437 HlyD family secretion protein 233 334 1.5E-10 T 11-10-2018 TF3313_1154 dc4bb67281929f3565b48535252c38c2 381 Pfam PF13533 Biotin-lipoyl like 62 94 8.3E-6 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain TF3313_0894 500dc1e02d0d3a0febb259490a6d53ca 267 SUPERFAMILY SSF51556 4 257 2.2E-73 T 11-10-2018 IPR032466 Metal-dependent hydrolase TF3313_0894 500dc1e02d0d3a0febb259490a6d53ca 267 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 127 137 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 TF3313_0894 500dc1e02d0d3a0febb259490a6d53ca 267 PIRSF PIRSF005902 1 259 5.2E-65 T 11-10-2018 IPR001130 TatD family GO:0016788 TF3313_0894 500dc1e02d0d3a0febb259490a6d53ca 267 Pfam PF01026 TatD related DNase 5 256 7.5E-62 T 11-10-2018 IPR001130 TatD family GO:0016788 TF3313_0894 500dc1e02d0d3a0febb259490a6d53ca 267 Gene3D G3DSA:3.20.20.140 4 259 3.2E-76 T 11-10-2018 TF3313_0894 500dc1e02d0d3a0febb259490a6d53ca 267 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 5 256 6.0E-63 T 11-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 TF3313_0742 380de67e36be76dbebe8f4dd0785c222 974 Gene3D G3DSA:1.25.40.10 680 846 8.7E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0742 380de67e36be76dbebe8f4dd0785c222 974 SUPERFAMILY SSF48452 692 812 4.03E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0742 380de67e36be76dbebe8f4dd0785c222 974 Pfam PF08487 Vault protein inter-alpha-trypsin domain 41 149 6.0E-20 T 11-10-2018 IPR013694 VIT domain TF3313_0742 380de67e36be76dbebe8f4dd0785c222 974 Pfam PF09906 Uncharacterized protein conserved in bacteria (DUF2135) 912 959 5.0E-13 T 11-10-2018 IPR019220 Domain of unknown function DUF2135 TF3313_0742 380de67e36be76dbebe8f4dd0785c222 974 SUPERFAMILY SSF53300 263 409 9.1E-5 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TF3313_1481 d979dd60ecfdc9b534cc738b495ea129 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 114 5.4E-9 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain TF3313_1481 d979dd60ecfdc9b534cc738b495ea129 131 SUPERFAMILY SSF54593 3 121 8.53E-24 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TF3313_1481 d979dd60ecfdc9b534cc738b495ea129 131 Gene3D G3DSA:3.10.180.10 1 121 1.2E-20 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TF3313_2631 5e938e4be831de4a37483309680f8adf 437 Pfam PF13568 Outer membrane protein beta-barrel domain 254 393 2.0E-12 T 11-10-2018 IPR025665 Outer membrane protein beta-barrel domain TF3313_2631 5e938e4be831de4a37483309680f8adf 437 SUPERFAMILY SSF56925 276 437 2.12E-7 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel TF3313_2631 5e938e4be831de4a37483309680f8adf 437 Gene3D G3DSA:2.40.160.20 259 437 1.0E-6 T 11-10-2018 TF3313_2199 d3b1fb2de57a3fa80e427c9de1497c9f 228 Gene3D G3DSA:3.40.50.620 4 227 9.3E-72 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_2199 d3b1fb2de57a3fa80e427c9de1497c9f 228 SUPERFAMILY SSF52402 6 216 3.31E-61 T 11-10-2018 TF3313_2199 d3b1fb2de57a3fa80e427c9de1497c9f 228 Pfam PF06508 Queuosine biosynthesis protein QueC 6 213 5.9E-81 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 TF3313_2199 d3b1fb2de57a3fa80e427c9de1497c9f 228 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 6 206 1.9E-76 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 TF3313_2199 d3b1fb2de57a3fa80e427c9de1497c9f 228 PIRSF PIRSF006293 2 225 6.0E-77 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 TF3313_2199 d3b1fb2de57a3fa80e427c9de1497c9f 228 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 4 219 47.87 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 TF3313_0701 0e7a2670073b9fb925856ec28becd69a 514 ProSitePatterns PS00149 Sulfatases signature 2. 123 133 - T 11-10-2018 IPR024607 Sulfatase, conserved site TF3313_0701 0e7a2670073b9fb925856ec28becd69a 514 Gene3D G3DSA:3.30.1120.10 438 512 3.2E-8 T 11-10-2018 TF3313_0701 0e7a2670073b9fb925856ec28becd69a 514 ProSitePatterns PS00523 Sulfatases signature 1. 76 88 - T 11-10-2018 IPR024607 Sulfatase, conserved site TF3313_0701 0e7a2670073b9fb925856ec28becd69a 514 Pfam PF16385 Domain of unknown function 413 502 2.5E-30 T 11-10-2018 IPR032158 Domain of unknown function DUF4994 TF3313_0701 0e7a2670073b9fb925856ec28becd69a 514 Pfam PF00884 Sulfatase 30 405 3.4E-65 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 TF3313_0701 0e7a2670073b9fb925856ec28becd69a 514 SUPERFAMILY SSF53649 27 505 1.44E-118 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 TF3313_0099 0604033579331fbec00c837a20e9d4d4 434 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 4 369 1.8E-151 T 11-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 TF3313_0099 0604033579331fbec00c837a20e9d4d4 434 PIRSF PIRSF004539 1 434 6.8E-179 T 11-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 TF3313_0099 0604033579331fbec00c837a20e9d4d4 434 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 4 432 2.5E-162 T 11-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 TF3313_0456 14f61f6e1b8deb48437486bb0dbe587f 1261 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 314 344 1.1E-18 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_0456 14f61f6e1b8deb48437486bb0dbe587f 1261 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 138 1261 8.3E-235 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_0456 14f61f6e1b8deb48437486bb0dbe587f 1261 SUPERFAMILY SSF56935 216 1261 3.71E-75 T 11-10-2018 TF3313_0456 14f61f6e1b8deb48437486bb0dbe587f 1261 Gene3D G3DSA:3.55.50.30 33 141 1.8E-5 T 11-10-2018 TF3313_0456 14f61f6e1b8deb48437486bb0dbe587f 1261 SUPERFAMILY SSF49464 138 218 3.01E-21 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_0456 14f61f6e1b8deb48437486bb0dbe587f 1261 SMART SM00965 70 121 1.1E-4 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TF3313_0456 14f61f6e1b8deb48437486bb0dbe587f 1261 Pfam PF13715 CarboxypepD_reg-like domain 140 220 3.3E-20 T 11-10-2018 TF3313_0456 14f61f6e1b8deb48437486bb0dbe587f 1261 Gene3D G3DSA:2.60.40.1120 142 208 5.2E-8 T 11-10-2018 TF3313_0456 14f61f6e1b8deb48437486bb0dbe587f 1261 Pfam PF07715 TonB-dependent Receptor Plug Domain 227 338 1.2E-20 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_0456 14f61f6e1b8deb48437486bb0dbe587f 1261 Gene3D G3DSA:2.170.130.10 209 343 3.2E-28 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_1231 276da6cbfab1f2abf33d7f461954fbc5 219 Gene3D G3DSA:3.40.50.300 2 184 4.3E-12 T 11-10-2018 TF3313_1231 276da6cbfab1f2abf33d7f461954fbc5 219 SUPERFAMILY SSF52540 22 165 3.19E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2352 de9f2a081821d60229070ac62fb4280f 439 Gene3D G3DSA:3.40.50.620 1 125 6.8E-34 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_2352 de9f2a081821d60229070ac62fb4280f 439 SUPERFAMILY SSF56037 321 436 3.01E-15 T 11-10-2018 TF3313_2352 de9f2a081821d60229070ac62fb4280f 439 SMART SM00977 363 435 6.9E-22 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 TF3313_2352 de9f2a081821d60229070ac62fb4280f 439 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 20 200 7.0E-52 T 11-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 TF3313_2352 de9f2a081821d60229070ac62fb4280f 439 Pfam PF11734 TilS substrate C-terminal domain 363 430 1.0E-5 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 TF3313_2352 de9f2a081821d60229070ac62fb4280f 439 Gene3D G3DSA:1.10.10.1360 126 208 3.1E-27 T 11-10-2018 TF3313_2352 de9f2a081821d60229070ac62fb4280f 439 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 363 408 1.5E-7 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 TF3313_2352 de9f2a081821d60229070ac62fb4280f 439 Pfam PF01171 PP-loop family 20 195 4.7E-47 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 TF3313_2352 de9f2a081821d60229070ac62fb4280f 439 SUPERFAMILY SSF52402 7 227 6.17E-53 T 11-10-2018 TF3313_2352 de9f2a081821d60229070ac62fb4280f 439 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 5 298 21.9 T 11-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 TF3313_0200 26c24e6ec593817ed0dd68df15bdeb05 126 Pfam PF03965 Penicillinase repressor 4 116 1.9E-24 T 11-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 TF3313_0200 26c24e6ec593817ed0dd68df15bdeb05 126 PIRSF PIRSF019455 1 125 4.1E-21 T 11-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 TF3313_0200 26c24e6ec593817ed0dd68df15bdeb05 126 SUPERFAMILY SSF46785 1 117 1.15E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TF3313_0200 26c24e6ec593817ed0dd68df15bdeb05 126 Gene3D G3DSA:1.10.10.10 1 75 1.9E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_2012 370b08678bb5fa91faa6f305bfeb1d2b 305 Gene3D G3DSA:3.20.20.70 2 304 2.0E-79 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_2012 370b08678bb5fa91faa6f305bfeb1d2b 305 SUPERFAMILY SSF51569 1 299 2.93E-66 T 11-10-2018 TF3313_2012 370b08678bb5fa91faa6f305bfeb1d2b 305 Pfam PF00701 Dihydrodipicolinate synthetase family 5 296 1.4E-48 T 11-10-2018 IPR002220 DapA-like GO:0016829 TF3313_2012 370b08678bb5fa91faa6f305bfeb1d2b 305 SMART SM01130 4 298 3.6E-60 T 11-10-2018 IPR002220 DapA-like GO:0016829 TF3313_2012 370b08678bb5fa91faa6f305bfeb1d2b 305 PIRSF PIRSF001365 1 304 5.9E-56 T 11-10-2018 IPR002220 DapA-like GO:0016829 TF3313_2012 370b08678bb5fa91faa6f305bfeb1d2b 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 1.6E-9 T 11-10-2018 IPR002220 DapA-like GO:0016829 TF3313_2012 370b08678bb5fa91faa6f305bfeb1d2b 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 1.6E-9 T 11-10-2018 IPR002220 DapA-like GO:0016829 TF3313_2012 370b08678bb5fa91faa6f305bfeb1d2b 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 133 150 1.6E-9 T 11-10-2018 IPR002220 DapA-like GO:0016829 TF3313_1790 7fd723a6022847daf6f550754d17cbcc 1425 Gene3D G3DSA:2.40.50.100 947 1023 9.2E-16 T 11-10-2018 TF3313_1790 7fd723a6022847daf6f550754d17cbcc 1425 Gene3D G3DSA:2.40.50.100 1024 1114 1.8E-21 T 11-10-2018 TF3313_1790 7fd723a6022847daf6f550754d17cbcc 1425 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 6 1405 18.638 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1790 7fd723a6022847daf6f550754d17cbcc 1425 SUPERFAMILY SSF64484 11 1394 0.0 T 11-10-2018 TF3313_1790 7fd723a6022847daf6f550754d17cbcc 1425 Pfam PF04998 RNA polymerase Rpb1, domain 5 765 1269 1.6E-69 T 11-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1790 7fd723a6022847daf6f550754d17cbcc 1425 SMART SM00663 245 524 3.4E-168 T 11-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1790 7fd723a6022847daf6f550754d17cbcc 1425 Gene3D G3DSA:1.10.274.100 568 644 5.7E-14 T 11-10-2018 TF3313_1790 7fd723a6022847daf6f550754d17cbcc 1425 Gene3D G3DSA:1.10.274.100 500 567 2.6E-26 T 11-10-2018 TF3313_1790 7fd723a6022847daf6f550754d17cbcc 1425 Gene3D G3DSA:1.10.40.90 384 426 9.0E-20 T 11-10-2018 TF3313_1790 7fd723a6022847daf6f550754d17cbcc 1425 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 15 1279 0.0 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1790 7fd723a6022847daf6f550754d17cbcc 1425 Pfam PF00623 RNA polymerase Rpb1, domain 2 411 495 3.1E-26 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1790 7fd723a6022847daf6f550754d17cbcc 1425 Pfam PF00623 RNA polymerase Rpb1, domain 2 354 409 2.8E-9 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1790 7fd723a6022847daf6f550754d17cbcc 1425 Gene3D G3DSA:1.10.150.390 1344 1405 2.7E-26 T 11-10-2018 TF3313_1790 7fd723a6022847daf6f550754d17cbcc 1425 Pfam PF04997 RNA polymerase Rpb1, domain 1 11 352 3.8E-80 T 11-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1790 7fd723a6022847daf6f550754d17cbcc 1425 Pfam PF05000 RNA polymerase Rpb1, domain 4 677 762 3.2E-16 T 11-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1790 7fd723a6022847daf6f550754d17cbcc 1425 Gene3D G3DSA:2.40.50.100 1139 1202 3.8E-58 T 11-10-2018 TF3313_1790 7fd723a6022847daf6f550754d17cbcc 1425 Gene3D G3DSA:1.10.132.30 645 789 7.1E-60 T 11-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_1790 7fd723a6022847daf6f550754d17cbcc 1425 Gene3D G3DSA:1.10.1790.20 1123 1279 3.8E-58 T 11-10-2018 TF3313_1790 7fd723a6022847daf6f550754d17cbcc 1425 Pfam PF04983 RNA polymerase Rpb1, domain 3 499 648 2.7E-22 T 11-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TF3313_0304 202c51576967a27f2e5e251888a3cba3 540 Pfam PF04932 O-Antigen ligase 103 287 1.1E-13 T 11-10-2018 IPR007016 O-antigen ligase-related TF3313_0304 202c51576967a27f2e5e251888a3cba3 540 SUPERFAMILY SSF48452 407 494 6.03E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0304 202c51576967a27f2e5e251888a3cba3 540 Gene3D G3DSA:1.25.40.10 381 505 4.4E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0013 1f8545ac18f7464e817ba0af0c7e5607 211 SUPERFAMILY SSF160925 20 211 4.58E-54 T 11-10-2018 TF3313_0013 1f8545ac18f7464e817ba0af0c7e5607 211 Pfam PF11644 Protein of unknown function (DUF3256) 16 210 1.4E-63 T 11-10-2018 IPR021670 Protein of unknown function DUF3256 TF3313_1460 d71942128c5878bdcebb585d73037ae7 779 Pfam PF14905 Outer membrane protein beta-barrel family 567 756 2.6E-7 T 11-10-2018 TF3313_1460 d71942128c5878bdcebb585d73037ae7 779 Pfam PF07715 TonB-dependent Receptor Plug Domain 124 227 6.1E-18 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_1460 d71942128c5878bdcebb585d73037ae7 779 Gene3D G3DSA:2.40.170.20 239 777 1.8E-32 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_1460 d71942128c5878bdcebb585d73037ae7 779 SUPERFAMILY SSF49464 26 119 1.44E-14 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_1460 d71942128c5878bdcebb585d73037ae7 779 Pfam PF13715 CarboxypepD_reg-like domain 27 114 8.2E-21 T 11-10-2018 TF3313_1460 d71942128c5878bdcebb585d73037ae7 779 SUPERFAMILY SSF56935 102 776 2.15E-72 T 11-10-2018 TF3313_1460 d71942128c5878bdcebb585d73037ae7 779 Gene3D G3DSA:2.170.130.10 103 231 1.9E-23 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_1460 d71942128c5878bdcebb585d73037ae7 779 Gene3D G3DSA:2.60.40.1120 26 102 6.8E-12 T 11-10-2018 TF3313_1786 4f9d21955c57f339001a975916a2ee93 231 PIRSF PIRSF002155 1 227 2.5E-73 T 11-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1786 4f9d21955c57f339001a975916a2ee93 231 Gene3D G3DSA:3.30.190.20 21 225 8.2E-81 T 11-10-2018 TF3313_1786 4f9d21955c57f339001a975916a2ee93 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 40.419 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 TF3313_1786 4f9d21955c57f339001a975916a2ee93 231 Gene3D G3DSA:3.40.50.790 68 159 8.2E-81 T 11-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich TF3313_1786 4f9d21955c57f339001a975916a2ee93 231 SUPERFAMILY SSF56808 8 226 1.24E-77 T 11-10-2018 IPR023674 Ribosomal protein L1-like TF3313_1786 4f9d21955c57f339001a975916a2ee93 231 Pfam PF00687 Ribosomal protein L1p/L10e family 31 220 1.8E-51 T 11-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein TF3313_1786 4f9d21955c57f339001a975916a2ee93 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 11-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1786 4f9d21955c57f339001a975916a2ee93 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 2.6E-96 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 TF3313_1529 ad927cbc10200005341fb76201646b4d 252 SMART SM00382 30 226 0.01 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_1529 ad927cbc10200005341fb76201646b4d 252 Pfam PF00005 ABC transporter 21 176 9.3E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TF3313_1529 ad927cbc10200005341fb76201646b4d 252 SUPERFAMILY SSF52540 4 233 5.57E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1529 ad927cbc10200005341fb76201646b4d 252 Gene3D G3DSA:3.40.50.300 5 252 1.9E-54 T 11-10-2018 TF3313_1529 ad927cbc10200005341fb76201646b4d 252 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 6 248 9.0E-111 T 11-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 TF3313_2500 500fb812fba2687172664d5d9a5daa0d 1000 SMART SM00387 600 710 1.4E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TF3313_2500 500fb812fba2687172664d5d9a5daa0d 1000 SUPERFAMILY SSF47384 478 553 5.89E-16 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TF3313_2500 500fb812fba2687172664d5d9a5daa0d 1000 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 949 992 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TF3313_2500 500fb812fba2687172664d5d9a5daa0d 1000 SMART SM00028 344 377 25.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2500 500fb812fba2687172664d5d9a5daa0d 1000 SMART SM00028 264 297 45.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2500 500fb812fba2687172664d5d9a5daa0d 1000 SMART SM00028 304 337 470.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2500 500fb812fba2687172664d5d9a5daa0d 1000 SMART SM00028 184 217 28.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2500 500fb812fba2687172664d5d9a5daa0d 1000 SUPERFAMILY SSF52172 742 870 2.28E-36 T 11-10-2018 IPR011006 CheY-like superfamily TF3313_2500 500fb812fba2687172664d5d9a5daa0d 1000 SUPERFAMILY SSF46689 949 998 1.3E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TF3313_2500 500fb812fba2687172664d5d9a5daa0d 1000 Pfam PF00072 Response regulator receiver domain 747 857 1.1E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TF3313_2500 500fb812fba2687172664d5d9a5daa0d 1000 SMART SM00448 744 856 4.4E-36 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TF3313_2500 500fb812fba2687172664d5d9a5daa0d 1000 Gene3D G3DSA:1.10.287.130 474 556 6.0E-19 T 11-10-2018 TF3313_2500 500fb812fba2687172664d5d9a5daa0d 1000 SMART SM00388 489 555 5.5E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TF3313_2500 500fb812fba2687172664d5d9a5daa0d 1000 PRINTS PR00344 Bacterial sensor protein C-terminal signature 655 665 5.3E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_2500 500fb812fba2687172664d5d9a5daa0d 1000 PRINTS PR00344 Bacterial sensor protein C-terminal signature 637 651 5.3E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_2500 500fb812fba2687172664d5d9a5daa0d 1000 PRINTS PR00344 Bacterial sensor protein C-terminal signature 670 688 5.3E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_2500 500fb812fba2687172664d5d9a5daa0d 1000 PRINTS PR00344 Bacterial sensor protein C-terminal signature 694 707 5.3E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TF3313_2500 500fb812fba2687172664d5d9a5daa0d 1000 Gene3D G3DSA:1.25.40.10 128 301 3.3E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2500 500fb812fba2687172664d5d9a5daa0d 1000 Gene3D G3DSA:1.10.10.60 895 1000 1.4E-20 T 11-10-2018 TF3313_2500 500fb812fba2687172664d5d9a5daa0d 1000 SUPERFAMILY SSF55874 544 710 1.3E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TF3313_2500 500fb812fba2687172664d5d9a5daa0d 1000 SUPERFAMILY SSF48452 142 259 6.07E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2500 500fb812fba2687172664d5d9a5daa0d 1000 Pfam PF12833 Helix-turn-helix domain 919 998 1.9E-17 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TF3313_2500 500fb812fba2687172664d5d9a5daa0d 1000 SMART SM00342 912 996 2.9E-14 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TF3313_2500 500fb812fba2687172664d5d9a5daa0d 1000 Gene3D G3DSA:3.30.565.10 561 712 2.5E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TF3313_2500 500fb812fba2687172664d5d9a5daa0d 1000 SUPERFAMILY SSF48452 227 406 1.9E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2500 500fb812fba2687172664d5d9a5daa0d 1000 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 606 707 4.6E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TF3313_2500 500fb812fba2687172664d5d9a5daa0d 1000 Gene3D G3DSA:1.25.40.10 302 432 2.8E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2500 500fb812fba2687172664d5d9a5daa0d 1000 Gene3D G3DSA:3.40.50.2300 732 875 1.6E-35 T 11-10-2018 TF3313_2500 500fb812fba2687172664d5d9a5daa0d 1000 Pfam PF00512 His Kinase A (phospho-acceptor) domain 490 554 5.2E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TF3313_1953 cbfdc033d11d856479a3e8c846198e34 324 SUPERFAMILY SSF53335 16 282 6.31E-68 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_1953 cbfdc033d11d856479a3e8c846198e34 324 ProSitePatterns PS00093 N-4 cytosine-specific DNA methylases signature. 40 45 - T 11-10-2018 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site GO:0003677|GO:0015667|GO:0090124 TF3313_1953 cbfdc033d11d856479a3e8c846198e34 324 Gene3D G3DSA:3.40.50.150 14 302 3.8E-77 T 11-10-2018 TF3313_1953 cbfdc033d11d856479a3e8c846198e34 324 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 67 87 8.8E-27 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 TF3313_1953 cbfdc033d11d856479a3e8c846198e34 324 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 232 250 8.8E-27 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 TF3313_1953 cbfdc033d11d856479a3e8c846198e34 324 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 255 275 8.8E-27 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 TF3313_1953 cbfdc033d11d856479a3e8c846198e34 324 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 35 49 8.8E-27 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 TF3313_1953 cbfdc033d11d856479a3e8c846198e34 324 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 213 230 8.8E-27 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 TF3313_1953 cbfdc033d11d856479a3e8c846198e34 324 Pfam PF01555 DNA methylase 37 271 2.3E-53 T 11-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 TF3313_2384 bb92ea75ee7f26557db541d00d0d5b26 420 SUPERFAMILY SSF51338 12 412 1.73E-26 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TF3313_2384 bb92ea75ee7f26557db541d00d0d5b26 420 SUPERFAMILY SSF51556 48 341 1.5E-92 T 11-10-2018 IPR032466 Metal-dependent hydrolase TF3313_2384 bb92ea75ee7f26557db541d00d0d5b26 420 Hamap MF_01281 5'-deoxyadenosine deaminase [dadD]. 2 416 40.386 T 11-10-2018 IPR023512 Deaminase MtaD/DadD GO:0019239 TF3313_2384 bb92ea75ee7f26557db541d00d0d5b26 420 Pfam PF01979 Amidohydrolase family 46 392 4.8E-68 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 TF3313_2384 bb92ea75ee7f26557db541d00d0d5b26 420 Gene3D G3DSA:3.20.20.140 49 338 2.5E-138 T 11-10-2018 TF3313_2384 bb92ea75ee7f26557db541d00d0d5b26 420 Gene3D G3DSA:2.30.40.10 15 402 2.5E-138 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TF3313_1166 2eb0e55ed2a71623b56ac4aab2670748 1111 SUPERFAMILY SSF56935 116 1111 1.98E-81 T 11-10-2018 TF3313_1166 2eb0e55ed2a71623b56ac4aab2670748 1111 Gene3D G3DSA:2.40.170.20 369 881 6.5E-17 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_1166 2eb0e55ed2a71623b56ac4aab2670748 1111 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 229 259 1.7E-18 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_1166 2eb0e55ed2a71623b56ac4aab2670748 1111 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 24 1111 1.6E-206 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_1166 2eb0e55ed2a71623b56ac4aab2670748 1111 Pfam PF13715 CarboxypepD_reg-like domain 25 118 5.9E-10 T 11-10-2018 TF3313_1166 2eb0e55ed2a71623b56ac4aab2670748 1111 Pfam PF07715 TonB-dependent Receptor Plug Domain 128 253 3.3E-17 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_1166 2eb0e55ed2a71623b56ac4aab2670748 1111 Pfam PF00593 TonB dependent receptor 557 1109 9.1E-22 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_1166 2eb0e55ed2a71623b56ac4aab2670748 1111 Gene3D G3DSA:2.170.130.10 107 258 7.7E-29 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_1166 2eb0e55ed2a71623b56ac4aab2670748 1111 SUPERFAMILY SSF49464 23 116 1.2E-11 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_2446 b8e53d4d66c4cccf57ed895ad09ee38b 315 Pfam PF04773 FecR protein 106 200 2.0E-20 T 11-10-2018 IPR006860 FecR protein TF3313_2446 b8e53d4d66c4cccf57ed895ad09ee38b 315 PIRSF PIRSF018266 1 315 1.5E-68 T 11-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component TF3313_2446 b8e53d4d66c4cccf57ed895ad09ee38b 315 Pfam PF16344 Domain of unknown function (DUF4974) 213 307 3.3E-19 T 11-10-2018 IPR032508 Protein FecR, C-terminal TF3313_2446 b8e53d4d66c4cccf57ed895ad09ee38b 315 Gene3D G3DSA:3.55.50.30 239 315 1.4E-11 T 11-10-2018 TF3313_2446 b8e53d4d66c4cccf57ed895ad09ee38b 315 Gene3D G3DSA:2.60.120.1440 89 236 9.1E-45 T 11-10-2018 TF3313_0763 6263fff1c0fbd2b16528de65f7fbb483 459 Gene3D G3DSA:1.25.40.10 261 391 1.6E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0763 6263fff1c0fbd2b16528de65f7fbb483 459 SUPERFAMILY SSF48452 51 180 8.34E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0763 6263fff1c0fbd2b16528de65f7fbb483 459 Gene3D G3DSA:1.25.40.10 38 150 1.1E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0763 6263fff1c0fbd2b16528de65f7fbb483 459 Gene3D G3DSA:1.25.40.10 151 260 3.7E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0763 6263fff1c0fbd2b16528de65f7fbb483 459 SUPERFAMILY SSF48452 151 319 5.18E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0763 6263fff1c0fbd2b16528de65f7fbb483 459 SMART SM00028 52 85 1.7 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_0763 6263fff1c0fbd2b16528de65f7fbb483 459 SMART SM00028 222 255 370.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_0763 6263fff1c0fbd2b16528de65f7fbb483 459 SMART SM00028 154 187 180.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_0763 6263fff1c0fbd2b16528de65f7fbb483 459 SMART SM00028 290 323 490.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_0763 6263fff1c0fbd2b16528de65f7fbb483 459 SMART SM00028 256 289 500.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_0763 6263fff1c0fbd2b16528de65f7fbb483 459 SMART SM00028 188 221 50.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_0763 6263fff1c0fbd2b16528de65f7fbb483 459 SMART SM00028 120 153 0.11 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_0763 6263fff1c0fbd2b16528de65f7fbb483 459 Pfam PF13176 Tetratricopeptide repeat 125 152 0.0038 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1822 7315b93d2f9facd323607b9c704a3718 247 SUPERFAMILY SSF53448 6 216 2.63E-31 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_1822 7315b93d2f9facd323607b9c704a3718 247 Gene3D G3DSA:3.90.550.10 3 241 1.2E-33 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_1822 7315b93d2f9facd323607b9c704a3718 247 Pfam PF00535 Glycosyl transferase family 2 8 168 1.9E-14 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TF3313_0477 88ecbd94cbe753b1a3bf36a1ffcc21d9 642 Pfam PF02780 Transketolase, C-terminal domain 503 624 1.1E-26 T 11-10-2018 IPR033248 Transketolase, C-terminal domain TF3313_0477 88ecbd94cbe753b1a3bf36a1ffcc21d9 642 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 9 633 42.25 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TF3313_0477 88ecbd94cbe753b1a3bf36a1ffcc21d9 642 SUPERFAMILY SSF52922 500 630 1.83E-32 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TF3313_0477 88ecbd94cbe753b1a3bf36a1ffcc21d9 642 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 10 287 2.1E-111 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TF3313_0477 88ecbd94cbe753b1a3bf36a1ffcc21d9 642 Gene3D G3DSA:3.40.50.920 503 636 3.7E-40 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TF3313_0477 88ecbd94cbe753b1a3bf36a1ffcc21d9 642 SUPERFAMILY SSF52518 9 356 3.79E-76 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold TF3313_0477 88ecbd94cbe753b1a3bf36a1ffcc21d9 642 SMART SM00861 326 491 2.3E-54 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TF3313_0477 88ecbd94cbe753b1a3bf36a1ffcc21d9 642 SUPERFAMILY SSF52518 302 487 1.49E-55 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold TF3313_0477 88ecbd94cbe753b1a3bf36a1ffcc21d9 642 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 630 2.0E-222 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TF3313_0477 88ecbd94cbe753b1a3bf36a1ffcc21d9 642 Pfam PF02779 Transketolase, pyrimidine binding domain 328 487 2.4E-31 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TF3313_0477 88ecbd94cbe753b1a3bf36a1ffcc21d9 642 Gene3D G3DSA:3.40.50.970 325 497 2.2E-59 T 11-10-2018 TF3313_1020 ce19e2ab02e9207bf6c43ba43b09aca3 158 Pfam PF00035 Double-stranded RNA binding motif 67 130 5.9E-11 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain TF3313_1020 ce19e2ab02e9207bf6c43ba43b09aca3 158 SUPERFAMILY SSF54768 20 139 1.22E-18 T 11-10-2018 TF3313_1020 ce19e2ab02e9207bf6c43ba43b09aca3 158 Gene3D G3DSA:1.10.1520.10 1 55 5.7E-8 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 TF3313_1020 ce19e2ab02e9207bf6c43ba43b09aca3 158 Gene3D G3DSA:3.30.160.20 60 143 1.3E-15 T 11-10-2018 TF3313_1020 ce19e2ab02e9207bf6c43ba43b09aca3 158 SMART SM00358 66 133 1.6E-9 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain TF3313_2667 3963e1f1f21a3e35b936a6cba91afafd 366 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 31 321 2.4E-105 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 TF3313_2667 3963e1f1f21a3e35b936a6cba91afafd 366 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 4 325 6.7E-111 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 TF3313_2667 3963e1f1f21a3e35b936a6cba91afafd 366 Gene3D G3DSA:3.40.718.10 1 330 3.4E-117 T 11-10-2018 TF3313_2667 3963e1f1f21a3e35b936a6cba91afafd 366 SUPERFAMILY SSF53659 3 330 1.6E-91 T 11-10-2018 TF3313_0071 9463240326a381a11f3ef3ebd5c9f158 418 Pfam PF03412 Peptidase C39 family 5 128 2.7E-31 T 11-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 TF3313_0071 9463240326a381a11f3ef3ebd5c9f158 418 Gene3D G3DSA:3.90.70.10 3 156 3.3E-44 T 11-10-2018 TF3313_0071 9463240326a381a11f3ef3ebd5c9f158 418 Pfam PF00664 ABC transporter transmembrane region 182 397 8.9E-21 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TF3313_0071 9463240326a381a11f3ef3ebd5c9f158 418 Gene3D G3DSA:1.20.1560.10 163 414 1.5E-42 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TF3313_0071 9463240326a381a11f3ef3ebd5c9f158 418 SUPERFAMILY SSF90123 165 409 3.66E-42 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TF3313_0601 dfeff61a73e41c7253b95f7ac4ef5ee7 407 SUPERFAMILY SSF56349 103 394 1.21E-25 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TF3313_0601 dfeff61a73e41c7253b95f7ac4ef5ee7 407 Gene3D G3DSA:1.10.150.130 95 209 1.1E-6 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal TF3313_0601 dfeff61a73e41c7253b95f7ac4ef5ee7 407 Pfam PF00589 Phage integrase family 246 388 3.9E-6 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TF3313_0601 dfeff61a73e41c7253b95f7ac4ef5ee7 407 Gene3D G3DSA:1.10.443.10 218 404 1.6E-14 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TF3313_2403 0fbddb217437d6f9b0bb79ab0e73579d 252 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 38.14 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 TF3313_2403 0fbddb217437d6f9b0bb79ab0e73579d 252 Pfam PF02348 Cytidylyltransferase 5 222 4.5E-46 T 11-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 TF3313_2403 0fbddb217437d6f9b0bb79ab0e73579d 252 SUPERFAMILY SSF53448 1 250 4.12E-55 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_2403 0fbddb217437d6f9b0bb79ab0e73579d 252 Gene3D G3DSA:3.90.550.10 1 252 3.2E-85 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_2403 0fbddb217437d6f9b0bb79ab0e73579d 252 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 3.3E-69 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 TF3313_0317 af944de965433d06e674309e6d59d872 453 Pfam PF04087 Domain of unknown function (DUF389) 70 205 1.2E-41 T 11-10-2018 IPR005240 Protein of unknown function DUF389 TF3313_0317 af944de965433d06e674309e6d59d872 453 TIGRFAM TIGR00341 TIGR00341: TIGR00341 family protein 28 243 4.5E-31 T 11-10-2018 TF3313_0044 2721c3ede3180e9ce649f7d993ecd90b 283 Gene3D G3DSA:3.30.1360.250 142 230 2.8E-69 T 11-10-2018 TF3313_0044 2721c3ede3180e9ce649f7d993ecd90b 283 Gene3D G3DSA:3.30.420.40 1 95 1.1E-27 T 11-10-2018 TF3313_0044 2721c3ede3180e9ce649f7d993ecd90b 283 Gene3D G3DSA:3.30.420.40 98 276 2.8E-69 T 11-10-2018 TF3313_0044 2721c3ede3180e9ce649f7d993ecd90b 283 SUPERFAMILY SSF53067 108 276 7.77E-41 T 11-10-2018 TF3313_0044 2721c3ede3180e9ce649f7d993ecd90b 283 SUPERFAMILY SSF53067 1 105 2.12E-25 T 11-10-2018 TF3313_2793 3276e71aa10efc3c03fa31752472b4a3 1201 Pfam PF00176 SNF2 family N-terminal domain 486 674 1.7E-6 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 TF3313_2793 3276e71aa10efc3c03fa31752472b4a3 1201 SUPERFAMILY SSF52540 633 886 4.29E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2793 3276e71aa10efc3c03fa31752472b4a3 1201 Gene3D G3DSA:3.40.50.300 640 939 9.3E-15 T 11-10-2018 TF3313_2793 3276e71aa10efc3c03fa31752472b4a3 1201 Pfam PF00271 Helicase conserved C-terminal domain 773 843 7.7E-5 T 11-10-2018 IPR001650 Helicase, C-terminal TF3313_2793 3276e71aa10efc3c03fa31752472b4a3 1201 SUPERFAMILY SSF52540 267 593 7.64E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1060 0ab9b9f2cfe25e9e3d0386d35c511ea5 342 SUPERFAMILY SSF53901 12 183 3.4E-17 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TF3313_1060 0ab9b9f2cfe25e9e3d0386d35c511ea5 342 Gene3D G3DSA:3.40.47.10 6 192 1.3E-12 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TF3313_1060 0ab9b9f2cfe25e9e3d0386d35c511ea5 342 SUPERFAMILY SSF53901 203 335 5.56E-5 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TF3313_1060 0ab9b9f2cfe25e9e3d0386d35c511ea5 342 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 42 178 2.2E-7 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal TF3313_2888 c9e9ee1c576eb3dad97fd8d2fcee7533 222 Gene3D G3DSA:3.30.10.20 45 112 2.6E-12 T 11-10-2018 TF3313_2888 c9e9ee1c576eb3dad97fd8d2fcee7533 222 SUPERFAMILY SSF54184 49 111 3.92E-6 T 11-10-2018 TF3313_2888 c9e9ee1c576eb3dad97fd8d2fcee7533 222 Pfam PF03793 PASTA domain 49 110 3.3E-12 T 11-10-2018 IPR005543 PASTA domain TF3313_2888 c9e9ee1c576eb3dad97fd8d2fcee7533 222 SMART SM00740 45 112 7.4E-9 T 11-10-2018 IPR005543 PASTA domain TF3313_2888 c9e9ee1c576eb3dad97fd8d2fcee7533 222 SMART SM00740 114 184 7.9 T 11-10-2018 IPR005543 PASTA domain TF3313_2938 af6f592eb186c793f374b0fed93cd059 283 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 11 252 5.0E-45 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 TF3313_2938 af6f592eb186c793f374b0fed93cd059 283 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 2 265 14.458 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 TF3313_2938 af6f592eb186c793f374b0fed93cd059 283 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 247 2.6E-55 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 TF3313_2938 af6f592eb186c793f374b0fed93cd059 283 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 9 36 9.7E-27 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 TF3313_2938 af6f592eb186c793f374b0fed93cd059 283 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 109 127 9.7E-27 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 TF3313_2938 af6f592eb186c793f374b0fed93cd059 283 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 127 153 9.7E-27 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 TF3313_2938 af6f592eb186c793f374b0fed93cd059 283 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 179 207 9.7E-27 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 TF3313_1213 72cf872633dc9e6d4aad10eded2d2efa 431 Pfam PF01225 Mur ligase family, catalytic domain 16 60 2.4E-8 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 TF3313_1213 72cf872633dc9e6d4aad10eded2d2efa 431 Pfam PF02875 Mur ligase family, glutamate ligase domain 305 382 1.7E-10 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 TF3313_1213 72cf872633dc9e6d4aad10eded2d2efa 431 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 18 431 1.5E-113 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TF3313_1213 72cf872633dc9e6d4aad10eded2d2efa 431 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 1 431 29.011 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TF3313_1213 72cf872633dc9e6d4aad10eded2d2efa 431 Pfam PF08245 Mur ligase middle domain 95 281 8.8E-46 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TF3313_1213 72cf872633dc9e6d4aad10eded2d2efa 431 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 93 117 - T 11-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 TF3313_1213 72cf872633dc9e6d4aad10eded2d2efa 431 Gene3D G3DSA:3.40.1190.10 72 299 1.4E-62 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TF3313_1213 72cf872633dc9e6d4aad10eded2d2efa 431 Gene3D G3DSA:3.90.190.20 302 431 3.2E-31 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TF3313_1213 72cf872633dc9e6d4aad10eded2d2efa 431 Gene3D G3DSA:3.40.1390.10 10 69 2.2E-15 T 11-10-2018 TF3313_1213 72cf872633dc9e6d4aad10eded2d2efa 431 SUPERFAMILY SSF53623 90 299 3.4E-50 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TF3313_1213 72cf872633dc9e6d4aad10eded2d2efa 431 SUPERFAMILY SSF53244 302 431 5.49E-29 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TF3313_1213 72cf872633dc9e6d4aad10eded2d2efa 431 SUPERFAMILY SSF63418 14 86 1.7E-17 T 11-10-2018 IPR035911 MurE/MurF, N-terminal TF3313_1190 d4aeabd76e7d43af99e2e9769808f775 521 Pfam PF12080 GldM C-terminal domain 323 505 9.2E-45 T 11-10-2018 IPR022719 Gliding motility-associated protein GldM, C-terminal TF3313_1190 d4aeabd76e7d43af99e2e9769808f775 521 Pfam PF12081 GldM N-terminal domain 34 221 4.9E-56 T 11-10-2018 IPR022720 Gliding motility-associated protein GldM, N-terminal TF3313_1190 d4aeabd76e7d43af99e2e9769808f775 521 TIGRFAM TIGR03517 GldM_gliding: gliding motility-associated protein GldM 4 508 9.8E-139 T 11-10-2018 IPR019859 Gliding motility-associated protein GldM TF3313_0349 0ea86ff15d7f81116738c9e9f30d5b6e 325 SUPERFAMILY SSF55729 33 205 1.06E-11 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TF3313_0349 0ea86ff15d7f81116738c9e9f30d5b6e 325 Pfam PF13444 Acetyltransferase (GNAT) domain 52 148 6.5E-10 T 11-10-2018 TF3313_1428 2216a725987d6acdd94bb2663bbd5ad9 114 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 3 114 26.399 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1428 2216a725987d6acdd94bb2663bbd5ad9 114 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 5 114 2.8E-37 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1428 2216a725987d6acdd94bb2663bbd5ad9 114 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 3 114 8.7E-41 T 11-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1428 2216a725987d6acdd94bb2663bbd5ad9 114 SUPERFAMILY SSF53137 4 112 6.32E-46 T 11-10-2018 TF3313_1428 2216a725987d6acdd94bb2663bbd5ad9 114 Gene3D G3DSA:3.30.420.100 2 114 4.1E-40 T 11-10-2018 TF3313_2355 7f94235d20c8f5971f98661c78a03329 188 SUPERFAMILY SSF52833 4 187 1.07E-62 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TF3313_2355 7f94235d20c8f5971f98661c78a03329 188 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 157 183 7.2E-6 T 11-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TF3313_2355 7f94235d20c8f5971f98661c78a03329 188 TIGRFAM TIGR03137 AhpC: peroxiredoxin 3 188 2.1E-102 T 11-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TF3313_2355 7f94235d20c8f5971f98661c78a03329 188 Gene3D G3DSA:3.40.30.10 1 187 6.0E-68 T 11-10-2018 TF3313_2355 7f94235d20c8f5971f98661c78a03329 188 PIRSF PIRSF000239 1 188 2.6E-59 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TF3313_2355 7f94235d20c8f5971f98661c78a03329 188 Pfam PF00578 AhpC/TSA family 5 133 2.8E-39 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TF3313_0945 87690cd9518eb91535ad0e2493fa2e8c 358 Gene3D G3DSA:2.30.30.40 55 126 2.0E-14 T 11-10-2018 TF3313_0945 87690cd9518eb91535ad0e2493fa2e8c 358 Gene3D G3DSA:3.90.1720.10 198 354 4.5E-43 T 11-10-2018 TF3313_0945 87690cd9518eb91535ad0e2493fa2e8c 358 Pfam PF08239 Bacterial SH3 domain 72 121 2.3E-6 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type TF3313_0945 87690cd9518eb91535ad0e2493fa2e8c 358 SUPERFAMILY SSF54001 202 335 3.6E-33 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TF3313_0945 87690cd9518eb91535ad0e2493fa2e8c 358 Gene3D G3DSA:2.30.30.40 128 197 7.5E-20 T 11-10-2018 TF3313_0945 87690cd9518eb91535ad0e2493fa2e8c 358 Pfam PF00877 NlpC/P60 family 220 310 2.1E-22 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain TF3313_2815 808ed04b0396517467701abaac606f66 265 SUPERFAMILY SSF52540 16 182 5.84E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2815 808ed04b0396517467701abaac606f66 265 Pfam PF12696 TraM recognition site of TraD and TraG 65 175 7.7E-15 T 11-10-2018 IPR032689 TraD/TraG, TraM recognition site TF3313_2815 808ed04b0396517467701abaac606f66 265 Gene3D G3DSA:3.40.50.300 9 198 5.1E-23 T 11-10-2018 TF3313_1574 2ee7dbf21b5722ba18a902dd2bd55fba 380 Gene3D G3DSA:3.40.30.10 236 377 8.8E-45 T 11-10-2018 TF3313_1574 2ee7dbf21b5722ba18a902dd2bd55fba 380 Pfam PF13905 Thioredoxin-like 268 360 6.0E-22 T 11-10-2018 IPR012336 Thioredoxin-like fold TF3313_1574 2ee7dbf21b5722ba18a902dd2bd55fba 380 Pfam PF14289 Domain of unknown function (DUF4369) 22 128 1.0E-7 T 11-10-2018 IPR025380 Domain of unknown function DUF4369 TF3313_1574 2ee7dbf21b5722ba18a902dd2bd55fba 380 SUPERFAMILY SSF52833 241 377 6.16E-31 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TF3313_1403 5698eb08d370ccd8102a60a69d44b238 170 SUPERFAMILY SSF88659 107 166 1.31E-12 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TF3313_1403 5698eb08d370ccd8102a60a69d44b238 170 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 165 3.4E-18 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TF3313_1403 5698eb08d370ccd8102a60a69d44b238 170 Pfam PF08281 Sigma-70, region 4 110 161 6.9E-12 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TF3313_1403 5698eb08d370ccd8102a60a69d44b238 170 SUPERFAMILY SSF88946 15 93 1.22E-14 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_1403 5698eb08d370ccd8102a60a69d44b238 170 Pfam PF04542 Sigma-70 region 2 20 74 1.2E-10 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_1403 5698eb08d370ccd8102a60a69d44b238 170 Gene3D G3DSA:1.10.1740.10 1 80 3.5E-18 T 11-10-2018 TF3313_1403 5698eb08d370ccd8102a60a69d44b238 170 Gene3D G3DSA:1.10.10.10 106 169 5.0E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_0670 521aaa60d586df64e5ea1b00b0844c0a 149 SUPERFAMILY SSF55961 13 141 4.2E-10 T 11-10-2018 TF3313_2093 9f6b424680367a74a30f94aa41612f6a 516 SUPERFAMILY SSF53649 31 502 2.22E-87 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 TF3313_2093 9f6b424680367a74a30f94aa41612f6a 516 Gene3D G3DSA:3.40.720.10 32 404 1.3E-90 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 TF3313_2093 9f6b424680367a74a30f94aa41612f6a 516 Gene3D G3DSA:3.30.1120.10 431 512 9.1E-17 T 11-10-2018 TF3313_2093 9f6b424680367a74a30f94aa41612f6a 516 Pfam PF00884 Sulfatase 32 382 2.7E-53 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 TF3313_1704 e6262ffefd7a8b74e211fcbb293f5805 111 Pfam PF01337 Barstar (barnase inhibitor) 4 80 8.5E-15 T 11-10-2018 IPR000468 Barstar (barnase inhibitor) TF3313_1704 e6262ffefd7a8b74e211fcbb293f5805 111 Gene3D G3DSA:3.30.370.10 1 89 6.6E-8 T 11-10-2018 IPR035905 Barstar-like superfamily TF3313_1704 e6262ffefd7a8b74e211fcbb293f5805 111 SUPERFAMILY SSF52038 3 81 4.97E-12 T 11-10-2018 IPR035905 Barstar-like superfamily TF3313_0677 f75ae7b090a7d0566e3397fe35ba289f 152 SUPERFAMILY SSF46689 45 145 1.79E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TF3313_0677 f75ae7b090a7d0566e3397fe35ba289f 152 Pfam PF13565 Homeodomain-like domain 63 143 4.5E-15 T 11-10-2018 TF3313_1109 5be3d912350416c8498470759ae3d52e 149 Pfam PF09335 SNARE associated Golgi protein 29 142 2.4E-8 T 11-10-2018 IPR032816 SNARE associated Golgi protein TF3313_0230 7fe0942d76c5c7648ba47445a2335083 284 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 37 282 5.6E-48 T 11-10-2018 TF3313_0230 7fe0942d76c5c7648ba47445a2335083 284 PIRSF PIRSF000401 37 284 1.9E-47 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 TF3313_0230 7fe0942d76c5c7648ba47445a2335083 284 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 282 26.445 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 TF3313_0230 7fe0942d76c5c7648ba47445a2335083 284 SUPERFAMILY SSF53335 70 277 6.03E-38 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_0230 7fe0942d76c5c7648ba47445a2335083 284 Gene3D G3DSA:3.40.50.150 89 284 2.1E-48 T 11-10-2018 TF3313_0552 d0ddc909f9763b2867f54c2c9a0bdd9b 98 Gene3D G3DSA:1.10.260.40 3 79 1.2E-24 T 11-10-2018 TF3313_0552 d0ddc909f9763b2867f54c2c9a0bdd9b 98 Pfam PF13560 Helix-turn-helix domain 13 65 2.1E-8 T 11-10-2018 TF3313_0552 d0ddc909f9763b2867f54c2c9a0bdd9b 98 SUPERFAMILY SSF47413 5 72 2.95E-12 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TF3313_0552 d0ddc909f9763b2867f54c2c9a0bdd9b 98 SMART SM00530 17 71 7.4E-6 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TF3313_1427 987fa304f52e912ce26ac0e79a29c948 183 PRINTS PR00059 Ribosomal protein L6 signature 145 166 1.6E-23 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TF3313_1427 987fa304f52e912ce26ac0e79a29c948 183 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.6E-23 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TF3313_1427 987fa304f52e912ce26ac0e79a29c948 183 Gene3D G3DSA:3.90.930.12 83 182 2.0E-34 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1427 987fa304f52e912ce26ac0e79a29c948 183 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 158 166 - T 11-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_1427 987fa304f52e912ce26ac0e79a29c948 183 Pfam PF00347 Ribosomal protein L6 11 82 3.7E-22 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1427 987fa304f52e912ce26ac0e79a29c948 183 Pfam PF00347 Ribosomal protein L6 90 167 1.0E-14 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1427 987fa304f52e912ce26ac0e79a29c948 183 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 180 35.484 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TF3313_1427 987fa304f52e912ce26ac0e79a29c948 183 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 180 8.1E-72 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TF3313_1427 987fa304f52e912ce26ac0e79a29c948 183 Gene3D G3DSA:3.90.930.12 1 82 2.4E-35 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1427 987fa304f52e912ce26ac0e79a29c948 183 PIRSF PIRSF002162 1 181 2.2E-51 T 11-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1427 987fa304f52e912ce26ac0e79a29c948 183 SUPERFAMILY SSF56053 1 82 5.04E-29 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1427 987fa304f52e912ce26ac0e79a29c948 183 SUPERFAMILY SSF56053 83 180 4.06E-30 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_0256 859f2dc0c7bcd57c1525e3ebd30bfc1c 480 Pfam PF14322 Starch-binding associating with outer membrane 60 200 3.1E-17 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_0256 859f2dc0c7bcd57c1525e3ebd30bfc1c 480 SUPERFAMILY SSF48452 6 479 2.09E-97 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0256 859f2dc0c7bcd57c1525e3ebd30bfc1c 480 Gene3D G3DSA:1.25.40.390 6 480 2.9E-101 T 11-10-2018 TF3313_0256 859f2dc0c7bcd57c1525e3ebd30bfc1c 480 Pfam PF07980 SusD family 250 478 3.9E-36 T 11-10-2018 IPR012944 RagB/SusD domain TF3313_0986 6f23ea3cefc5bc21c224052caf7b7105 382 SUPERFAMILY SSF53756 1 382 1.18E-25 T 11-10-2018 TF3313_0986 6f23ea3cefc5bc21c224052caf7b7105 382 Gene3D G3DSA:3.40.50.2000 201 365 1.3E-13 T 11-10-2018 TF3313_0986 6f23ea3cefc5bc21c224052caf7b7105 382 Gene3D G3DSA:3.40.50.2000 3 200 3.1E-9 T 11-10-2018 TF3313_1833 19381006b4ed1201152094e0ebaeff7d 377 Pfam PF00534 Glycosyl transferases group 1 200 316 2.3E-7 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 TF3313_1833 19381006b4ed1201152094e0ebaeff7d 377 Gene3D G3DSA:3.40.50.2000 1 177 3.8E-16 T 11-10-2018 TF3313_1833 19381006b4ed1201152094e0ebaeff7d 377 Gene3D G3DSA:3.40.50.2000 178 347 2.2E-11 T 11-10-2018 TF3313_1833 19381006b4ed1201152094e0ebaeff7d 377 Pfam PF09314 Domain of unknown function (DUF1972) 3 180 2.4E-18 T 11-10-2018 IPR015393 Domain of unknown function DUF1972 TF3313_1833 19381006b4ed1201152094e0ebaeff7d 377 SUPERFAMILY SSF53756 1 374 2.67E-35 T 11-10-2018 TF3313_0608 7c165d9a6976c690868adeaf2aeb2d81 547 Gene3D G3DSA:3.30.750.44 55 342 1.2E-76 T 11-10-2018 TF3313_0608 7c165d9a6976c690868adeaf2aeb2d81 547 SMART SM00245 177 362 1.8E-44 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 TF3313_0608 7c165d9a6976c690868adeaf2aeb2d81 547 Pfam PF03572 Peptidase family S41 203 357 4.0E-48 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 TF3313_0608 7c165d9a6976c690868adeaf2aeb2d81 547 SMART SM00228 102 175 1.4E-11 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TF3313_0608 7c165d9a6976c690868adeaf2aeb2d81 547 Gene3D G3DSA:3.90.226.10 192 357 1.2E-76 T 11-10-2018 TF3313_0608 7c165d9a6976c690868adeaf2aeb2d81 547 Gene3D G3DSA:2.30.42.10 102 191 1.2E-76 T 11-10-2018 TF3313_0608 7c165d9a6976c690868adeaf2aeb2d81 547 Pfam PF13180 PDZ domain 103 177 3.8E-10 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TF3313_0608 7c165d9a6976c690868adeaf2aeb2d81 547 SUPERFAMILY SSF52096 43 357 3.81E-64 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TF3313_0608 7c165d9a6976c690868adeaf2aeb2d81 547 SUPERFAMILY SSF50156 75 199 5.05E-16 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 TF3313_0608 7c165d9a6976c690868adeaf2aeb2d81 547 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 63 357 1.3E-81 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 TF3313_1678 e84547360d8e2d2896c703083218551a 185 Gene3D G3DSA:3.40.50.150 1 185 1.4E-47 T 11-10-2018 TF3313_1678 e84547360d8e2d2896c703083218551a 185 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 116 122 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TF3313_1678 e84547360d8e2d2896c703083218551a 185 Pfam PF03602 Conserved hypothetical protein 95 1 176 1.4E-35 T 11-10-2018 TF3313_1678 e84547360d8e2d2896c703083218551a 185 SUPERFAMILY SSF53335 1 177 3.07E-40 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_1678 e84547360d8e2d2896c703083218551a 185 PIRSF PIRSF004553 1 180 1.5E-36 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 TF3313_0481 ada9eb55d7d59b99a53e799cd6b06288 720 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 151 9.2E-15 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_0481 ada9eb55d7d59b99a53e799cd6b06288 720 Pfam PF00593 TonB dependent receptor 266 712 8.7E-29 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_0481 ada9eb55d7d59b99a53e799cd6b06288 720 SUPERFAMILY SSF56935 35 715 2.53E-73 T 11-10-2018 TF3313_0481 ada9eb55d7d59b99a53e799cd6b06288 720 Gene3D G3DSA:2.170.130.10 40 157 7.8E-22 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_2243 c4b3b7e27091ff38f8b271f6b5b0f6ad 397 Gene3D G3DSA:3.40.50.720 5 387 1.3E-151 T 11-10-2018 TF3313_2243 c4b3b7e27091ff38f8b271f6b5b0f6ad 397 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 138 385 4.6E-35 T 11-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 TF3313_2243 c4b3b7e27091ff38f8b271f6b5b0f6ad 397 SUPERFAMILY SSF51735 3 188 6.09E-16 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_2243 c4b3b7e27091ff38f8b271f6b5b0f6ad 397 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 5 134 1.1E-31 T 11-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 TF3313_2243 c4b3b7e27091ff38f8b271f6b5b0f6ad 397 Gene3D G3DSA:3.30.360.10 148 344 1.3E-151 T 11-10-2018 TF3313_0475 ac66970d9e693deb9d25e6a954a25a32 332 PIRSF PIRSF000102 4 316 7.5E-71 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 TF3313_0475 ac66970d9e693deb9d25e6a954a25a32 332 Gene3D G3DSA:3.90.110.10 150 332 6.2E-63 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 TF3313_0475 ac66970d9e693deb9d25e6a954a25a32 332 Gene3D G3DSA:3.40.50.720 1 149 1.4E-46 T 11-10-2018 TF3313_0475 ac66970d9e693deb9d25e6a954a25a32 332 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 151 304 9.7E-12 T 11-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 TF3313_0475 ac66970d9e693deb9d25e6a954a25a32 332 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 8 145 1.3E-28 T 11-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 TF3313_0475 ac66970d9e693deb9d25e6a954a25a32 332 SUPERFAMILY SSF56327 151 316 1.14E-34 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 TF3313_0475 ac66970d9e693deb9d25e6a954a25a32 332 SUPERFAMILY SSF51735 8 145 1.3E-28 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_2090 1c9b5101f8b0206b06634db8de81e126 568 Pfam PF14322 Starch-binding associating with outer membrane 22 216 3.6E-23 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_2090 1c9b5101f8b0206b06634db8de81e126 568 SUPERFAMILY SSF48452 18 568 3.16E-138 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2090 1c9b5101f8b0206b06634db8de81e126 568 Gene3D G3DSA:1.25.40.390 23 568 6.0E-139 T 11-10-2018 TF3313_2090 1c9b5101f8b0206b06634db8de81e126 568 Pfam PF07980 SusD family 257 568 5.0E-58 T 11-10-2018 IPR012944 RagB/SusD domain TF3313_0092 c42b25f49236da65a7569fa41642af9f 447 Pfam PF08328 Adenylosuccinate lyase C-terminal 330 445 2.9E-45 T 11-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 TF3313_0092 c42b25f49236da65a7569fa41642af9f 447 Gene3D G3DSA:1.10.275.10 1 115 6.4E-43 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal TF3313_0092 c42b25f49236da65a7569fa41642af9f 447 Pfam PF00206 Lyase 14 311 4.0E-51 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal TF3313_0092 c42b25f49236da65a7569fa41642af9f 447 Gene3D G3DSA:1.20.200.10 116 446 4.4E-144 T 11-10-2018 TF3313_0092 c42b25f49236da65a7569fa41642af9f 447 Gene3D G3DSA:1.10.40.30 381 445 4.4E-144 T 11-10-2018 TF3313_0092 c42b25f49236da65a7569fa41642af9f 447 ProSitePatterns PS00163 Fumarate lyases signature. 293 302 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 TF3313_0092 c42b25f49236da65a7569fa41642af9f 447 SUPERFAMILY SSF48557 4 446 3.93E-92 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 TF3313_0092 c42b25f49236da65a7569fa41642af9f 447 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 446 5.5E-120 T 11-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TF3313_0092 c42b25f49236da65a7569fa41642af9f 447 PRINTS PR00149 Fumarate lyase superfamily signature 115 133 2.4E-16 T 11-10-2018 IPR000362 Fumarate lyase family TF3313_0092 c42b25f49236da65a7569fa41642af9f 447 PRINTS PR00149 Fumarate lyase superfamily signature 161 179 2.4E-16 T 11-10-2018 IPR000362 Fumarate lyase family TF3313_0092 c42b25f49236da65a7569fa41642af9f 447 PRINTS PR00149 Fumarate lyase superfamily signature 250 277 2.4E-16 T 11-10-2018 IPR000362 Fumarate lyase family TF3313_0092 c42b25f49236da65a7569fa41642af9f 447 PRINTS PR00149 Fumarate lyase superfamily signature 293 309 2.4E-16 T 11-10-2018 IPR000362 Fumarate lyase family TF3313_1079 58ab42ca32d23bfbd37013ba9edb9897 304 Gene3D G3DSA:3.20.20.70 49 302 1.5E-82 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_1079 58ab42ca32d23bfbd37013ba9edb9897 304 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 60 278 5.1E-51 T 11-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 TF3313_1079 58ab42ca32d23bfbd37013ba9edb9897 304 PIRSF PIRSF001357 51 302 1.6E-74 T 11-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 TF3313_1079 58ab42ca32d23bfbd37013ba9edb9897 304 PIRSF PIRSF001357 15 55 160.0 T 11-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 TF3313_1079 58ab42ca32d23bfbd37013ba9edb9897 304 Pfam PF01791 DeoC/LacD family aldolase 62 264 2.7E-24 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 TF3313_1079 58ab42ca32d23bfbd37013ba9edb9897 304 SUPERFAMILY SSF51569 53 297 2.72E-71 T 11-10-2018 TF3313_1079 58ab42ca32d23bfbd37013ba9edb9897 304 SMART SM01133 57 297 1.4E-67 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 TF3313_2670 22d735b0d936a26d33fcc09d88214fbe 724 SUPERFAMILY SSF54534 354 457 4.64E-11 T 11-10-2018 TF3313_2670 22d735b0d936a26d33fcc09d88214fbe 724 Gene3D G3DSA:3.10.50.40 357 464 1.4E-14 T 11-10-2018 TF3313_2670 22d735b0d936a26d33fcc09d88214fbe 724 Pfam PF13623 SurA N-terminal domain 4 148 1.1E-38 T 11-10-2018 TF3313_2670 22d735b0d936a26d33fcc09d88214fbe 724 SUPERFAMILY SSF109998 44 276 1.96E-10 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily TF3313_2670 22d735b0d936a26d33fcc09d88214fbe 724 Gene3D G3DSA:3.10.50.40 257 353 1.1E-5 T 11-10-2018 TF3313_2670 22d735b0d936a26d33fcc09d88214fbe 724 Gene3D G3DSA:1.10.4030.30 232 356 1.1E-5 T 11-10-2018 TF3313_2670 22d735b0d936a26d33fcc09d88214fbe 724 Pfam PF13616 PPIC-type PPIASE domain 344 458 4.5E-21 T 11-10-2018 TF3313_2048 2739e574525e27a0390dfcb6657fcb49 767 SUPERFAMILY SSF56935 169 742 5.04E-12 T 11-10-2018 TF3313_2048 2739e574525e27a0390dfcb6657fcb49 767 SUPERFAMILY SSF49464 27 127 1.02E-10 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_2048 2739e574525e27a0390dfcb6657fcb49 767 Pfam PF13715 CarboxypepD_reg-like domain 28 117 1.0E-8 T 11-10-2018 TF3313_2581 f264d37d75ef5ba1e7dc9341e33c8ca5 356 SUPERFAMILY SSF140931 103 284 1.7E-21 T 11-10-2018 IPR036597 Fido-like domain superfamily TF3313_2581 f264d37d75ef5ba1e7dc9341e33c8ca5 356 Pfam PF13776 Domain of unknown function (DUF4172) 6 86 2.1E-23 T 11-10-2018 IPR025230 Domain of unknown function DUF4172 TF3313_2581 f264d37d75ef5ba1e7dc9341e33c8ca5 356 Gene3D G3DSA:1.10.3290.10 39 281 1.1E-28 T 11-10-2018 IPR036597 Fido-like domain superfamily TF3313_2581 f264d37d75ef5ba1e7dc9341e33c8ca5 356 Pfam PF02661 Fic/DOC family 142 214 6.5E-11 T 11-10-2018 IPR003812 Fido domain TF3313_2064 123ae09e39d9fd286754bb36fb0427a7 317 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 12 316 1.9E-122 T 11-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 TF3313_2064 123ae09e39d9fd286754bb36fb0427a7 317 Gene3D G3DSA:3.40.50.300 1 317 1.1E-89 T 11-10-2018 TF3313_2064 123ae09e39d9fd286754bb36fb0427a7 317 Hamap MF_00215 Pantothenate kinase [coaA]. 1 317 147.157 T 11-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 TF3313_2064 123ae09e39d9fd286754bb36fb0427a7 317 SUPERFAMILY SSF52540 11 315 2.32E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2064 123ae09e39d9fd286754bb36fb0427a7 317 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 91 234 8.4E-11 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 TF3313_2064 123ae09e39d9fd286754bb36fb0427a7 317 PIRSF PIRSF000545 2 317 1.5E-133 T 11-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 TF3313_1766 ac3558d14292b6b2a24196bccde2ce31 777 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 168 504 2.3E-118 T 11-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 TF3313_1766 ac3558d14292b6b2a24196bccde2ce31 777 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 34 164 1.9E-23 T 11-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal TF3313_1766 ac3558d14292b6b2a24196bccde2ce31 777 SUPERFAMILY SSF51445 168 517 4.21E-121 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily TF3313_1766 ac3558d14292b6b2a24196bccde2ce31 777 SUPERFAMILY SSF55545 32 167 2.09E-30 T 11-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 TF3313_1766 ac3558d14292b6b2a24196bccde2ce31 777 PRINTS PR00738 Glycosyl hydrolase family 20 signature 468 484 5.0E-46 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 TF3313_1766 ac3558d14292b6b2a24196bccde2ce31 777 PRINTS PR00738 Glycosyl hydrolase family 20 signature 252 269 5.0E-46 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 TF3313_1766 ac3558d14292b6b2a24196bccde2ce31 777 PRINTS PR00738 Glycosyl hydrolase family 20 signature 300 318 5.0E-46 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 TF3313_1766 ac3558d14292b6b2a24196bccde2ce31 777 PRINTS PR00738 Glycosyl hydrolase family 20 signature 322 335 5.0E-46 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 TF3313_1766 ac3558d14292b6b2a24196bccde2ce31 777 PRINTS PR00738 Glycosyl hydrolase family 20 signature 191 212 5.0E-46 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 TF3313_1766 ac3558d14292b6b2a24196bccde2ce31 777 PRINTS PR00738 Glycosyl hydrolase family 20 signature 486 503 5.0E-46 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 TF3313_1766 ac3558d14292b6b2a24196bccde2ce31 777 PRINTS PR00738 Glycosyl hydrolase family 20 signature 162 179 5.0E-46 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 TF3313_1766 ac3558d14292b6b2a24196bccde2ce31 777 PRINTS PR00738 Glycosyl hydrolase family 20 signature 119 139 5.0E-46 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 TF3313_1766 ac3558d14292b6b2a24196bccde2ce31 777 Pfam PF07691 PA14 domain 667 752 3.6E-7 T 11-10-2018 IPR011658 PA14 domain TF3313_1766 ac3558d14292b6b2a24196bccde2ce31 777 Gene3D G3DSA:3.30.379.10 36 167 1.5E-169 T 11-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 TF3313_1766 ac3558d14292b6b2a24196bccde2ce31 777 Gene3D G3DSA:3.20.20.80 168 526 1.5E-169 T 11-10-2018 TF3313_1766 ac3558d14292b6b2a24196bccde2ce31 777 SMART SM00758 625 764 1.3E-13 T 11-10-2018 IPR011658 PA14 domain TF3313_1766 ac3558d14292b6b2a24196bccde2ce31 777 Pfam PF13290 Chitobiase/beta-hexosaminidase C-terminal domain 550 608 1.1E-10 T 11-10-2018 TF3313_1571 a8caa54890471cacb0e2980f148c6349 568 Gene3D G3DSA:2.20.20.130 362 447 3.7E-25 T 11-10-2018 TF3313_1571 a8caa54890471cacb0e2980f148c6349 568 Gene3D G3DSA:1.25.40.900 392 531 3.7E-25 T 11-10-2018 TF3313_1571 a8caa54890471cacb0e2980f148c6349 568 Gene3D G3DSA:1.25.40.390 322 554 3.7E-25 T 11-10-2018 TF3313_1571 a8caa54890471cacb0e2980f148c6349 568 Gene3D G3DSA:1.25.40.390 34 273 1.4E-49 T 11-10-2018 TF3313_1571 a8caa54890471cacb0e2980f148c6349 568 SUPERFAMILY SSF48452 11 565 8.25E-81 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1571 a8caa54890471cacb0e2980f148c6349 568 Pfam PF14322 Starch-binding associating with outer membrane 30 216 3.1E-25 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_1571 a8caa54890471cacb0e2980f148c6349 568 Pfam PF07980 SusD family 266 565 1.6E-19 T 11-10-2018 IPR012944 RagB/SusD domain TF3313_1975 e468cf0771d2c29ebc66eb2c3ec4995c 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 126 9.5E-12 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain TF3313_1975 e468cf0771d2c29ebc66eb2c3ec4995c 128 SUPERFAMILY SSF54593 3 127 2.01E-28 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TF3313_1975 e468cf0771d2c29ebc66eb2c3ec4995c 128 Gene3D G3DSA:3.10.180.10 2 128 8.2E-35 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TF3313_0596 33de318c4c7ebd1ace97b61cc0022af0 290 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 3 208 1.7E-27 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 TF3313_0596 33de318c4c7ebd1ace97b61cc0022af0 290 SUPERFAMILY SSF52402 2 197 1.43E-27 T 11-10-2018 TF3313_0596 33de318c4c7ebd1ace97b61cc0022af0 290 Gene3D G3DSA:3.40.50.620 1 222 4.0E-46 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_1002 41299bb8663edc5d86071e8198151e64 387 Gene3D G3DSA:3.90.1150.10 278 387 5.6E-15 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TF3313_1002 41299bb8663edc5d86071e8198151e64 387 PIRSF PIRSF000390 17 387 3.2E-87 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase TF3313_1002 41299bb8663edc5d86071e8198151e64 387 TIGRFAM TIGR04181 NHT_00031: aminotransferase, LLPSF_NHT_00031 family 21 379 5.3E-169 T 11-10-2018 IPR026385 Aminotransferase, LLPSF_NHT_00031 family TF3313_1002 41299bb8663edc5d86071e8198151e64 387 SUPERFAMILY SSF53383 21 383 5.24E-91 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TF3313_1002 41299bb8663edc5d86071e8198151e64 387 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 31 384 3.5E-82 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase TF3313_1002 41299bb8663edc5d86071e8198151e64 387 Gene3D G3DSA:3.40.640.10 4 276 5.4E-87 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TF3313_0191 cb996b514601af9454225d13f1b846ac 424 SMART SM00245 201 405 9.1E-7 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 TF3313_0191 cb996b514601af9454225d13f1b846ac 424 Pfam PF14684 Tricorn protease C1 domain 35 100 3.1E-8 T 11-10-2018 IPR028204 Tricorn protease C1 domain TF3313_0191 cb996b514601af9454225d13f1b846ac 424 Pfam PF03572 Peptidase family S41 226 403 7.4E-28 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 TF3313_0191 cb996b514601af9454225d13f1b846ac 424 SUPERFAMILY SSF52096 35 411 2.15E-47 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TF3313_0191 cb996b514601af9454225d13f1b846ac 424 Gene3D G3DSA:3.30.750.44 34 115 5.5E-15 T 11-10-2018 TF3313_0191 cb996b514601af9454225d13f1b846ac 424 Gene3D G3DSA:3.90.226.10 199 423 4.2E-44 T 11-10-2018 TF3313_2479 336074b0942d3bb8f6cba8f9f2eb686a 253 Gene3D G3DSA:3.40.50.970 84 249 1.1E-17 T 11-10-2018 TF3313_2479 336074b0942d3bb8f6cba8f9f2eb686a 253 SUPERFAMILY SSF52518 24 241 5.53E-50 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold TF3313_2479 336074b0942d3bb8f6cba8f9f2eb686a 253 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 60 217 1.1E-21 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 TF3313_2796 658ae417bc4b5f85f4d57d172e8ba047 750 PRINTS PR00702 Acriflavin resistance protein family signature 714 737 1.4E-5 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_2796 658ae417bc4b5f85f4d57d172e8ba047 750 PRINTS PR00702 Acriflavin resistance protein family signature 584 607 1.4E-5 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_2796 658ae417bc4b5f85f4d57d172e8ba047 750 PRINTS PR00702 Acriflavin resistance protein family signature 639 663 1.4E-5 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_2796 658ae417bc4b5f85f4d57d172e8ba047 750 Pfam PF03176 MMPL family 126 369 8.4E-25 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 TF3313_2796 658ae417bc4b5f85f4d57d172e8ba047 750 Pfam PF03176 MMPL family 488 738 8.5E-19 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 TF3313_2796 658ae417bc4b5f85f4d57d172e8ba047 750 SUPERFAMILY SSF82866 543 740 6.93E-32 T 11-10-2018 TF3313_2796 658ae417bc4b5f85f4d57d172e8ba047 750 Gene3D G3DSA:1.20.1640.10 190 381 3.8E-20 T 11-10-2018 TF3313_2796 658ae417bc4b5f85f4d57d172e8ba047 750 Gene3D G3DSA:1.20.1640.10 564 750 1.1E-16 T 11-10-2018 TF3313_2796 658ae417bc4b5f85f4d57d172e8ba047 750 SUPERFAMILY SSF82866 169 365 1.44E-32 T 11-10-2018 TF3313_1422 721d5ddc71f7bf7088bf9bf02b2a78f6 121 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 121 1.6E-51 T 11-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 TF3313_1422 721d5ddc71f7bf7088bf9bf02b2a78f6 121 SMART SM01374 1 121 5.8E-80 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 TF3313_1422 721d5ddc71f7bf7088bf9bf02b2a78f6 121 SUPERFAMILY SSF50193 1 121 1.44E-47 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 TF3313_1422 721d5ddc71f7bf7088bf9bf02b2a78f6 121 Pfam PF00238 Ribosomal protein L14p/L23e 1 121 6.4E-52 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 TF3313_1422 721d5ddc71f7bf7088bf9bf02b2a78f6 121 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 121 25.65 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 TF3313_1422 721d5ddc71f7bf7088bf9bf02b2a78f6 121 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 11-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1422 721d5ddc71f7bf7088bf9bf02b2a78f6 121 Gene3D G3DSA:2.40.150.20 1 121 2.8E-50 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 TF3313_1411 67575126ca6fd618e4a821e9c8d1ac75 101 SMART SM01403 6 100 1.0E-52 T 11-10-2018 IPR027486 Ribosomal protein S10 domain TF3313_1411 67575126ca6fd618e4a821e9c8d1ac75 101 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 2 101 24.316 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1411 67575126ca6fd618e4a821e9c8d1ac75 101 PRINTS PR00971 Ribosomal protein S10 family signature 60 74 2.0E-15 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1411 67575126ca6fd618e4a821e9c8d1ac75 101 PRINTS PR00971 Ribosomal protein S10 family signature 4 17 2.0E-15 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1411 67575126ca6fd618e4a821e9c8d1ac75 101 PRINTS PR00971 Ribosomal protein S10 family signature 39 54 2.0E-15 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1411 67575126ca6fd618e4a821e9c8d1ac75 101 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 3 101 5.3E-42 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1411 67575126ca6fd618e4a821e9c8d1ac75 101 Pfam PF00338 Ribosomal protein S10p/S20e 6 100 1.7E-34 T 11-10-2018 IPR027486 Ribosomal protein S10 domain TF3313_1411 67575126ca6fd618e4a821e9c8d1ac75 101 ProSitePatterns PS00361 Ribosomal protein S10 signature. 28 43 - T 11-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1411 67575126ca6fd618e4a821e9c8d1ac75 101 Gene3D G3DSA:3.30.70.600 1 101 7.8E-37 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily TF3313_1411 67575126ca6fd618e4a821e9c8d1ac75 101 SUPERFAMILY SSF54999 4 101 1.29E-34 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily TF3313_0890 0566f63479808a83b5494214c0747034 229 Hamap MF_00238 Cytidylate kinase [cmk]. 4 227 31.142 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 TF3313_0890 0566f63479808a83b5494214c0747034 229 TIGRFAM TIGR00017 cmk: cytidylate kinase 3 214 8.4E-69 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 TF3313_0890 0566f63479808a83b5494214c0747034 229 SUPERFAMILY SSF52540 1 224 6.77E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0890 0566f63479808a83b5494214c0747034 229 Gene3D G3DSA:3.40.50.300 1 228 2.5E-77 T 11-10-2018 TF3313_0890 0566f63479808a83b5494214c0747034 229 Pfam PF02224 Cytidylate kinase 6 221 7.8E-66 T 11-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 TF3313_1346 57060c2c7f0b9958f18a32eaeb74319b 475 Gene3D G3DSA:3.30.460.10 10 154 1.8E-44 T 11-10-2018 TF3313_1346 57060c2c7f0b9958f18a32eaeb74319b 475 Pfam PF01743 Poly A polymerase head domain 32 157 3.1E-26 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 TF3313_1346 57060c2c7f0b9958f18a32eaeb74319b 475 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 186 246 2.0E-21 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 TF3313_1346 57060c2c7f0b9958f18a32eaeb74319b 475 SUPERFAMILY SSF81301 21 155 8.39E-35 T 11-10-2018 TF3313_1346 57060c2c7f0b9958f18a32eaeb74319b 475 Pfam PF01966 HD domain 263 350 2.3E-11 T 11-10-2018 IPR006674 HD domain TF3313_1346 57060c2c7f0b9958f18a32eaeb74319b 475 SUPERFAMILY SSF81891 157 464 9.68E-63 T 11-10-2018 TF3313_1346 57060c2c7f0b9958f18a32eaeb74319b 475 SMART SM00471 258 365 0.0035 T 11-10-2018 IPR003607 HD/PDEase domain TF3313_1346 57060c2c7f0b9958f18a32eaeb74319b 475 Gene3D G3DSA:1.10.3090.10 156 459 6.6E-53 T 11-10-2018 TF3313_1137 6fddeb6592a199a70715d78989bf746e 520 Pfam PF03781 Sulfatase-modifying factor enzyme 1 224 481 3.7E-43 T 11-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 TF3313_1137 6fddeb6592a199a70715d78989bf746e 520 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 16 179 4.4E-27 T 11-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal TF3313_1137 6fddeb6592a199a70715d78989bf746e 520 Gene3D G3DSA:3.90.1580.10 213 518 1.6E-53 T 11-10-2018 TF3313_1137 6fddeb6592a199a70715d78989bf746e 520 SUPERFAMILY SSF48695 16 179 1.49E-17 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily TF3313_1137 6fddeb6592a199a70715d78989bf746e 520 Gene3D G3DSA:1.10.3820.10 6 184 7.7E-29 T 11-10-2018 IPR038266 NapC/NirT cytochrome c superfamily TF3313_1137 6fddeb6592a199a70715d78989bf746e 520 SUPERFAMILY SSF56436 221 513 8.95E-56 T 11-10-2018 IPR016187 C-type lectin fold TF3313_0671 f39b4b22e8b462af80df9aecde60fdbe 68 Pfam PF01381 Helix-turn-helix 8 62 1.8E-9 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TF3313_0671 f39b4b22e8b462af80df9aecde60fdbe 68 SUPERFAMILY SSF47413 5 66 4.1E-13 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TF3313_0671 f39b4b22e8b462af80df9aecde60fdbe 68 Gene3D G3DSA:1.10.260.40 2 67 1.1E-27 T 11-10-2018 TF3313_0671 f39b4b22e8b462af80df9aecde60fdbe 68 SMART SM00530 7 62 1.1E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TF3313_0275 28804595e43ecd6b84c08de0fa706fb2 116 SUPERFAMILY SSF50692 1 112 7.46E-49 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily TF3313_0275 28804595e43ecd6b84c08de0fa706fb2 116 Pfam PF02261 Aspartate decarboxylase 1 112 3.8E-53 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 TF3313_0275 28804595e43ecd6b84c08de0fa706fb2 116 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 93 4.0E-34 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 TF3313_0275 28804595e43ecd6b84c08de0fa706fb2 116 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 116 69.646 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 TF3313_0275 28804595e43ecd6b84c08de0fa706fb2 116 Gene3D G3DSA:2.40.40.20 1 116 4.5E-52 T 11-10-2018 TF3313_0275 28804595e43ecd6b84c08de0fa706fb2 116 PIRSF PIRSF006246 1 116 4.7E-51 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 TF3313_0275 28804595e43ecd6b84c08de0fa706fb2 116 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 110 3.6E-51 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 TF3313_0272 69a006a8b08973045de42f0a75b7bc75 753 Gene3D G3DSA:2.70.98.10 50 373 8.2E-255 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 TF3313_0272 69a006a8b08973045de42f0a75b7bc75 753 Gene3D G3DSA:3.30.2080.10 322 750 8.2E-255 T 11-10-2018 TF3313_0272 69a006a8b08973045de42f0a75b7bc75 753 SUPERFAMILY SSF48208 290 732 3.15E-34 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 TF3313_0272 69a006a8b08973045de42f0a75b7bc75 753 Pfam PF07971 Glycosyl hydrolase family 92 265 746 5.1E-179 T 11-10-2018 IPR012939 Glycosyl hydrolase family 92 TF3313_0272 69a006a8b08973045de42f0a75b7bc75 753 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 18 749 6.5E-204 T 11-10-2018 IPR005887 Alpha-1,2-mannosidase, putative TF3313_0272 69a006a8b08973045de42f0a75b7bc75 753 Gene3D G3DSA:1.20.1610.10 462 622 8.2E-255 T 11-10-2018 TF3313_0272 69a006a8b08973045de42f0a75b7bc75 753 Gene3D G3DSA:1.20.1050.60 374 461 8.2E-255 T 11-10-2018 TF3313_0922 0bf364f7a2ab3f8b3a01a907502d6208 111 Pfam PF00403 Heavy-metal-associated domain 37 98 6.1E-11 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TF3313_0922 0bf364f7a2ab3f8b3a01a907502d6208 111 Gene3D G3DSA:3.30.70.100 22 104 2.4E-13 T 11-10-2018 TF3313_0922 0bf364f7a2ab3f8b3a01a907502d6208 111 SUPERFAMILY SSF55008 32 103 2.23E-13 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 TF3313_0053 1fe38b346b0da61f1983a427c20af5a6 500 SUPERFAMILY SSF102114 107 447 1.44E-34 T 11-10-2018 TF3313_0053 1fe38b346b0da61f1983a427c20af5a6 500 TIGRFAM TIGR04148 GG_samocin_CFB: radical SAM peptide maturase, GG-Bacteroidales family 92 497 1.2E-137 T 11-10-2018 IPR026407 Radical SAM peptide maturase, GG-Bacteroidales family TF3313_0053 1fe38b346b0da61f1983a427c20af5a6 500 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 112 123 - T 11-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TF3313_0053 1fe38b346b0da61f1983a427c20af5a6 500 Pfam PF04055 Radical SAM superfamily 111 289 1.6E-13 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TF3313_0053 1fe38b346b0da61f1983a427c20af5a6 500 Gene3D G3DSA:3.20.20.70 102 487 2.5E-50 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_0053 1fe38b346b0da61f1983a427c20af5a6 500 Pfam PF13353 4Fe-4S single cluster domain 113 240 4.3E-7 T 11-10-2018 TF3313_1118 f9af87b83bb27ab4812a25c508bad47c 174 Pfam PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family 77 165 4.9E-27 T 11-10-2018 IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 Reactome: R-HSA-163841 TF3313_1118 f9af87b83bb27ab4812a25c508bad47c 174 Gene3D G3DSA:1.20.120.1630 1 170 1.3E-15 T 11-10-2018 TF3313_0384 cc6bedfee9c3df58ebffa8a167266585 439 Gene3D G3DSA:3.30.2290.10 1 227 1.1E-73 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal TF3313_0384 cc6bedfee9c3df58ebffa8a167266585 439 SUPERFAMILY SSF111283 5 438 1.7E-98 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 TF3313_0384 cc6bedfee9c3df58ebffa8a167266585 439 Pfam PF01523 Putative modulator of DNA gyrase 25 318 3.5E-40 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 TF3313_0785 4532709e4b947d8d3cea4a7041a52734 298 Pfam PF00005 ABC transporter 20 163 2.0E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TF3313_0785 4532709e4b947d8d3cea4a7041a52734 298 SUPERFAMILY SSF52540 4 240 1.33E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0785 4532709e4b947d8d3cea4a7041a52734 298 SMART SM00382 28 212 7.0E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_0785 4532709e4b947d8d3cea4a7041a52734 298 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TF3313_0785 4532709e4b947d8d3cea4a7041a52734 298 Gene3D G3DSA:3.40.50.300 1 237 1.5E-64 T 11-10-2018 TF3313_2635 b3749d6ead8031d5732b06f7fda3d561 154 TIGRFAM TIGR00086 smpB: SsrA-binding protein 11 152 9.4E-59 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 TF3313_2635 b3749d6ead8031d5732b06f7fda3d561 154 SUPERFAMILY SSF74982 5 135 1.1E-46 T 11-10-2018 IPR023620 Small protein B TF3313_2635 b3749d6ead8031d5732b06f7fda3d561 154 Pfam PF01668 SmpB protein 12 152 1.9E-58 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 TF3313_2635 b3749d6ead8031d5732b06f7fda3d561 154 Gene3D G3DSA:2.40.280.10 3 131 8.1E-45 T 11-10-2018 IPR023620 Small protein B TF3313_2635 b3749d6ead8031d5732b06f7fda3d561 154 Hamap MF_00023 SsrA-binding protein [smpB]. 1 154 65.474 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 TF3313_2635 b3749d6ead8031d5732b06f7fda3d561 154 ProSitePatterns PS01317 SsrA-binding protein. 29 41 - T 11-10-2018 IPR020081 SsrA-binding protein, conserved site TF3313_2635 b3749d6ead8031d5732b06f7fda3d561 154 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 16 135 1.0E-53 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 TF3313_0941 161a17d03a791c7c47a6f208045b9ffa 204 SUPERFAMILY SSF88713 13 199 2.72E-49 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 TF3313_0941 161a17d03a791c7c47a6f208045b9ffa 204 Gene3D G3DSA:3.20.20.370 14 203 5.8E-51 T 11-10-2018 TF3313_0941 161a17d03a791c7c47a6f208045b9ffa 204 Pfam PF01522 Polysaccharide deacetylase 22 131 1.9E-23 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 TF3313_0909 95d8961bba0f0a8a0ebda04004ada80f 323 Gene3D G3DSA:2.60.120.10 1 230 2.6E-78 T 11-10-2018 IPR014710 RmlC-like jelly roll fold TF3313_0909 95d8961bba0f0a8a0ebda04004ada80f 323 SUPERFAMILY SSF51182 1 312 4.98E-86 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily TF3313_0909 95d8961bba0f0a8a0ebda04004ada80f 323 Pfam PF01238 Phosphomannose isomerase type I 7 112 1.4E-12 T 11-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 TF3313_0909 95d8961bba0f0a8a0ebda04004ada80f 323 PIRSF PIRSF036894 1 320 2.7E-95 T 11-10-2018 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 TF3313_0909 95d8961bba0f0a8a0ebda04004ada80f 323 Gene3D G3DSA:2.60.120.10 235 314 7.8E-6 T 11-10-2018 IPR014710 RmlC-like jelly roll fold TF3313_0786 95d8961bba0f0a8a0ebda04004ada80f 323 Gene3D G3DSA:2.60.120.10 1 230 2.6E-78 T 11-10-2018 IPR014710 RmlC-like jelly roll fold TF3313_0786 95d8961bba0f0a8a0ebda04004ada80f 323 SUPERFAMILY SSF51182 1 312 4.98E-86 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily TF3313_0786 95d8961bba0f0a8a0ebda04004ada80f 323 Pfam PF01238 Phosphomannose isomerase type I 7 112 1.4E-12 T 11-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 TF3313_0786 95d8961bba0f0a8a0ebda04004ada80f 323 PIRSF PIRSF036894 1 320 2.7E-95 T 11-10-2018 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 TF3313_0786 95d8961bba0f0a8a0ebda04004ada80f 323 Gene3D G3DSA:2.60.120.10 235 314 7.8E-6 T 11-10-2018 IPR014710 RmlC-like jelly roll fold TF3313_2371 4045cfdbe005e0327e1c080ba39b0543 178 Gene3D G3DSA:3.90.79.10 37 169 5.8E-24 T 11-10-2018 TF3313_2371 4045cfdbe005e0327e1c080ba39b0543 178 SUPERFAMILY SSF55811 13 176 2.03E-34 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TF3313_2371 4045cfdbe005e0327e1c080ba39b0543 178 Pfam PF00293 NUDIX domain 47 156 3.0E-15 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 TF3313_2371 4045cfdbe005e0327e1c080ba39b0543 178 ProSitePatterns PS00893 Nudix box signature. 78 99 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 TF3313_2371 4045cfdbe005e0327e1c080ba39b0543 178 PRINTS PR00502 NUDIX hydrolase family signature 87 102 4.1E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 TF3313_2371 4045cfdbe005e0327e1c080ba39b0543 178 PRINTS PR00502 NUDIX hydrolase family signature 73 87 4.1E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 TF3313_0330 2046e8e1e8caa14dccda954ea243fe14 639 SUPERFAMILY SSF56935 94 621 2.46E-14 T 11-10-2018 TF3313_2248 dbc72ff1fa66f27ac29708db682815e8 1165 Pfam PF03176 MMPL family 51 417 5.0E-7 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 TF3313_2248 dbc72ff1fa66f27ac29708db682815e8 1165 Pfam PF03176 MMPL family 672 808 7.6E-6 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 TF3313_2248 dbc72ff1fa66f27ac29708db682815e8 1165 SUPERFAMILY SSF82866 241 415 8.24E-16 T 11-10-2018 TF3313_2248 dbc72ff1fa66f27ac29708db682815e8 1165 SUPERFAMILY SSF82866 624 805 8.37E-21 T 11-10-2018 TF3313_2248 dbc72ff1fa66f27ac29708db682815e8 1165 SMART SM00563 894 1003 7.4E-23 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TF3313_2248 dbc72ff1fa66f27ac29708db682815e8 1165 SUPERFAMILY SSF69593 812 1061 4.05E-29 T 11-10-2018 TF3313_2248 dbc72ff1fa66f27ac29708db682815e8 1165 Pfam PF01553 Acyltransferase 887 1000 7.7E-19 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TF3313_2035 70c4eb9c12be8b9fe30c619092d93213 188 Pfam PF12682 Flavodoxin 32 184 2.5E-58 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 TF3313_2035 70c4eb9c12be8b9fe30c619092d93213 188 ProSitePatterns PS00201 Flavodoxin signature. 35 51 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 TF3313_2035 70c4eb9c12be8b9fe30c619092d93213 188 SUPERFAMILY SSF52218 32 167 3.92E-20 T 11-10-2018 IPR029039 Flavoprotein-like superfamily TF3313_2035 70c4eb9c12be8b9fe30c619092d93213 188 Gene3D G3DSA:3.40.50.360 19 186 1.6E-56 T 11-10-2018 IPR029039 Flavoprotein-like superfamily TF3313_1803 a971d4251b309abaedfbb85bfdb2adca 903 SMART SM00487 152 360 1.6E-17 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TF3313_1803 a971d4251b309abaedfbb85bfdb2adca 903 Gene3D G3DSA:3.40.50.300 147 351 6.8E-43 T 11-10-2018 TF3313_1803 a971d4251b309abaedfbb85bfdb2adca 903 SUPERFAMILY SSF52540 145 373 1.33E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1803 a971d4251b309abaedfbb85bfdb2adca 903 Pfam PF08463 EcoEI R protein C-terminal 722 895 3.9E-32 T 11-10-2018 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 TF3313_1803 a971d4251b309abaedfbb85bfdb2adca 903 SUPERFAMILY SSF52540 176 555 1.97E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1803 a971d4251b309abaedfbb85bfdb2adca 903 Pfam PF04851 Type III restriction enzyme, res subunit 155 337 1.5E-34 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 TF3313_1803 a971d4251b309abaedfbb85bfdb2adca 903 Pfam PF00271 Helicase conserved C-terminal domain 455 550 1.5E-4 T 11-10-2018 IPR001650 Helicase, C-terminal TF3313_1803 a971d4251b309abaedfbb85bfdb2adca 903 Gene3D G3DSA:3.40.50.300 353 593 6.8E-45 T 11-10-2018 TF3313_1663 f57a09d03cef8a2f414d3142527f1273 162 Gene3D G3DSA:3.30.1360.40 86 150 5.6E-21 T 11-10-2018 TF3313_1663 f57a09d03cef8a2f414d3142527f1273 162 SUPERFAMILY SSF46785 13 81 1.09E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TF3313_1663 f57a09d03cef8a2f414d3142527f1273 162 Gene3D G3DSA:1.10.10.10 4 85 3.5E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_1663 f57a09d03cef8a2f414d3142527f1273 162 SUPERFAMILY SSF55252 89 149 2.88E-15 T 11-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 TF3313_1663 f57a09d03cef8a2f414d3142527f1273 162 Hamap MF_00173 Arginine repressor [argR]. 1 154 40.058 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 TF3313_1663 f57a09d03cef8a2f414d3142527f1273 162 PRINTS PR01467 Bacterial arginine repressor signature 120 135 4.6E-16 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 TF3313_1663 f57a09d03cef8a2f414d3142527f1273 162 PRINTS PR01467 Bacterial arginine repressor signature 35 48 4.6E-16 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 TF3313_1663 f57a09d03cef8a2f414d3142527f1273 162 PRINTS PR01467 Bacterial arginine repressor signature 51 66 4.6E-16 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 TF3313_1663 f57a09d03cef8a2f414d3142527f1273 162 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 92 148 3.0E-9 T 11-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 TF3313_1663 f57a09d03cef8a2f414d3142527f1273 162 Pfam PF02863 Arginine repressor, C-terminal domain 89 147 6.0E-20 T 11-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 TF3313_1663 f57a09d03cef8a2f414d3142527f1273 162 Pfam PF01316 Arginine repressor, DNA binding domain 17 80 3.1E-20 T 11-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 TF3313_1863 96bc1dcca3eea261a289c3ee17c8fa06 477 Gene3D G3DSA:3.30.750.170 48 392 1.4E-85 T 11-10-2018 TF3313_1863 96bc1dcca3eea261a289c3ee17c8fa06 477 Pfam PF03572 Peptidase family S41 212 399 2.1E-14 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 TF3313_1863 96bc1dcca3eea261a289c3ee17c8fa06 477 SUPERFAMILY SSF50156 120 165 9.1E-8 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 TF3313_1863 96bc1dcca3eea261a289c3ee17c8fa06 477 Gene3D G3DSA:3.90.226.10 197 424 1.4E-85 T 11-10-2018 TF3313_1863 96bc1dcca3eea261a289c3ee17c8fa06 477 Gene3D G3DSA:2.30.42.10 95 196 1.4E-85 T 11-10-2018 TF3313_1863 96bc1dcca3eea261a289c3ee17c8fa06 477 SUPERFAMILY SSF52096 45 421 6.79E-25 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TF3313_1174 22992b1c8d7820e10f07d067f7a9671c 517 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 34 515 6.9E-140 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 TF3313_1174 22992b1c8d7820e10f07d067f7a9671c 517 Pfam PF09190 DALR domain 401 458 2.1E-11 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 TF3313_1174 22992b1c8d7820e10f07d067f7a9671c 517 Gene3D G3DSA:3.40.50.620 32 359 8.3E-126 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_1174 22992b1c8d7820e10f07d067f7a9671c 517 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 93 102 4.2E-25 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 TF3313_1174 22992b1c8d7820e10f07d067f7a9671c 517 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 237 255 4.2E-25 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 TF3313_1174 22992b1c8d7820e10f07d067f7a9671c 517 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 268 289 4.2E-25 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 TF3313_1174 22992b1c8d7820e10f07d067f7a9671c 517 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 57 68 4.2E-25 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 TF3313_1174 22992b1c8d7820e10f07d067f7a9671c 517 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 34 517 34.86 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 TF3313_1174 22992b1c8d7820e10f07d067f7a9671c 517 Gene3D G3DSA:1.20.120.640 360 517 2.7E-33 T 11-10-2018 TF3313_1174 22992b1c8d7820e10f07d067f7a9671c 517 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 47 366 6.7E-103 T 11-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 TF3313_1174 22992b1c8d7820e10f07d067f7a9671c 517 SUPERFAMILY SSF47323 370 516 1.27E-28 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_1174 22992b1c8d7820e10f07d067f7a9671c 517 SUPERFAMILY SSF52374 36 365 8.16E-81 T 11-10-2018 TF3313_1174 22992b1c8d7820e10f07d067f7a9671c 517 SMART SM00840 399 468 2.5E-10 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 TF3313_1665 ead411fa5ffd37279b63cef084b954aa 602 SUPERFAMILY SSF48452 448 591 5.31E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1665 ead411fa5ffd37279b63cef084b954aa 602 Gene3D G3DSA:1.25.40.10 409 515 1.6E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1665 ead411fa5ffd37279b63cef084b954aa 602 Gene3D G3DSA:2.40.10.120 42 234 9.5E-10 T 11-10-2018 TF3313_1665 ead411fa5ffd37279b63cef084b954aa 602 Gene3D G3DSA:1.25.40.10 516 590 4.5E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1665 ead411fa5ffd37279b63cef084b954aa 602 SMART SM00028 491 524 15.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1665 ead411fa5ffd37279b63cef084b954aa 602 SMART SM00028 559 592 69.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1665 ead411fa5ffd37279b63cef084b954aa 602 SMART SM00028 525 558 0.16 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1665 ead411fa5ffd37279b63cef084b954aa 602 SUPERFAMILY SSF50494 53 230 7.47E-12 T 11-10-2018 IPR009003 Peptidase S1, PA clan TF3313_2165 6c5816b02ac3e0af459ae914685fa939 414 Pfam PF09455 CRISPR-associated (Cas) DxTHG family 5 361 2.3E-36 T 11-10-2018 IPR019016 CRISPR-associated DxTHG protein TF3313_2165 6c5816b02ac3e0af459ae914685fa939 414 SUPERFAMILY SSF160980 26 266 4.05E-12 T 11-10-2018 TF3313_2165 6c5816b02ac3e0af459ae914685fa939 414 TIGRFAM TIGR02221 cas_TM1812: CRISPR-associated protein, TM1812 family 5 238 2.5E-46 T 11-10-2018 IPR011742 CRISPR-associated protein, TM1812 TF3313_2165 6c5816b02ac3e0af459ae914685fa939 414 TIGRFAM TIGR02549 CRISPR_DxTHG: CRISPR-associated DxTHG motif protein 152 171 1.1E-8 T 11-10-2018 IPR013383 CRISPR-associated protein DxTHG, conserved site TF3313_0629 97ae26782bdce832131b820fb64c69de 247 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 8 232 6.5E-39 T 11-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TF3313_0629 97ae26782bdce832131b820fb64c69de 247 Pfam PF03099 Biotin/lipoate A/B protein ligase family 14 138 7.4E-15 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 TF3313_0629 97ae26782bdce832131b820fb64c69de 247 Gene3D G3DSA:3.30.930.10 3 197 2.1E-45 T 11-10-2018 TF3313_0629 97ae26782bdce832131b820fb64c69de 247 SUPERFAMILY SSF55681 8 196 1.09E-42 T 11-10-2018 TF3313_1031 12adcd45de9c22b1ac7d712c40e7fa4b 492 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 434 492 5.4E-9 T 11-10-2018 IPR026444 Secretion system C-terminal sorting domain TF3313_1031 12adcd45de9c22b1ac7d712c40e7fa4b 492 Gene3D G3DSA:3.40.390.10 45 255 2.8E-27 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 TF3313_1031 12adcd45de9c22b1ac7d712c40e7fa4b 492 Pfam PF05572 Pregnancy-associated plasma protein-A 151 249 1.9E-6 T 11-10-2018 IPR008754 Peptidase M43, pregnancy-associated plasma-A Reactome: R-HSA-381426 TF3313_1031 12adcd45de9c22b1ac7d712c40e7fa4b 492 SUPERFAMILY SSF55486 50 232 1.05E-10 T 11-10-2018 TF3313_0745 3548c896e30641c4d8d4520a4911506a 126 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 8 113 1.7E-27 T 11-10-2018 IPR012657 23S rRNA-intervening sequence protein TF3313_0745 3548c896e30641c4d8d4520a4911506a 126 Gene3D G3DSA:1.20.1440.60 1 116 1.2E-38 T 11-10-2018 IPR036583 23S rRNA-intervening sequence superfamily TF3313_0745 3548c896e30641c4d8d4520a4911506a 126 PIRSF PIRSF035652 1 119 1.3E-44 T 11-10-2018 IPR012657 23S rRNA-intervening sequence protein TF3313_0745 3548c896e30641c4d8d4520a4911506a 126 SUPERFAMILY SSF158446 3 111 4.05E-29 T 11-10-2018 IPR036583 23S rRNA-intervening sequence superfamily TF3313_0745 3548c896e30641c4d8d4520a4911506a 126 Pfam PF05635 23S rRNA-intervening sequence protein 6 107 1.7E-23 T 11-10-2018 IPR012657 23S rRNA-intervening sequence protein TF3313_2246 36ef1062d2e74532aef45d0e61446254 123 Gene3D G3DSA:3.10.129.10 4 119 5.7E-16 T 11-10-2018 TF3313_2246 36ef1062d2e74532aef45d0e61446254 123 SUPERFAMILY SSF54637 21 118 3.65E-11 T 11-10-2018 IPR029069 HotDog domain superfamily TF3313_2246 36ef1062d2e74532aef45d0e61446254 123 Pfam PF07977 FabA-like domain 24 99 7.2E-7 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 TF3313_0164 a394549cfabb717943c86c35a30d0708 182 Gene3D G3DSA:1.10.1740.10 2 74 7.4E-18 T 11-10-2018 TF3313_0164 a394549cfabb717943c86c35a30d0708 182 Pfam PF04542 Sigma-70 region 2 11 76 2.8E-14 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_0164 a394549cfabb717943c86c35a30d0708 182 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 7 175 3.6E-27 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TF3313_0164 a394549cfabb717943c86c35a30d0708 182 SUPERFAMILY SSF88946 7 84 9.42E-19 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_0164 a394549cfabb717943c86c35a30d0708 182 Gene3D G3DSA:1.10.10.10 102 178 1.7E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_0164 a394549cfabb717943c86c35a30d0708 182 SUPERFAMILY SSF88659 111 177 7.29E-11 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TF3313_0583 10fff0507f9ef24550236cab83a95d5f 368 Pfam PF03864 Phage major capsid protein E 24 293 6.8E-10 T 11-10-2018 IPR005564 Major capsid protein GpE TF3313_0843 d1fbdf093d501f0e6b4c28ba18785b7e 346 Pfam PF02277 Phosphoribosyltransferase 6 339 3.9E-123 T 11-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 TF3313_0843 d1fbdf093d501f0e6b4c28ba18785b7e 346 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 10 341 6.9E-128 T 11-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 TF3313_0843 d1fbdf093d501f0e6b4c28ba18785b7e 346 SUPERFAMILY SSF52733 4 339 6.28E-108 T 11-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 TF3313_0843 d1fbdf093d501f0e6b4c28ba18785b7e 346 Gene3D G3DSA:3.40.50.10210 52 325 2.2E-118 T 11-10-2018 TF3313_0843 d1fbdf093d501f0e6b4c28ba18785b7e 346 Gene3D G3DSA:1.10.1610.10 6 330 2.2E-118 T 11-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 TF3313_0843 d1fbdf093d501f0e6b4c28ba18785b7e 346 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 8 344 31.407 T 11-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 TF3313_0219 74c81979eafbbb24df79a66ee6f6af0b 339 Pfam PF01012 Electron transfer flavoprotein domain 5 192 1.4E-38 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 TF3313_0219 74c81979eafbbb24df79a66ee6f6af0b 339 Gene3D G3DSA:3.40.50.1220 212 339 2.8E-52 T 11-10-2018 TF3313_0219 74c81979eafbbb24df79a66ee6f6af0b 339 SUPERFAMILY SSF52402 3 197 4.19E-45 T 11-10-2018 TF3313_0219 74c81979eafbbb24df79a66ee6f6af0b 339 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 215 297 1.5E-35 T 11-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 TF3313_0219 74c81979eafbbb24df79a66ee6f6af0b 339 SMART SM00893 4 204 6.0E-31 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 TF3313_0219 74c81979eafbbb24df79a66ee6f6af0b 339 SUPERFAMILY SSF52467 214 332 2.62E-43 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily TF3313_0219 74c81979eafbbb24df79a66ee6f6af0b 339 Gene3D G3DSA:3.40.50.620 1 211 1.4E-73 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_0219 74c81979eafbbb24df79a66ee6f6af0b 339 PIRSF PIRSF000089 1 339 8.2E-106 T 11-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 TF3313_1471 6abf1b581c684b51f1b25f22404d98a9 781 Pfam PF00593 TonB dependent receptor 464 778 2.5E-23 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_1471 6abf1b581c684b51f1b25f22404d98a9 781 Gene3D G3DSA:2.60.40.1120 29 104 5.9E-11 T 11-10-2018 TF3313_1471 6abf1b581c684b51f1b25f22404d98a9 781 Gene3D G3DSA:2.170.130.10 105 233 9.1E-24 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_1471 6abf1b581c684b51f1b25f22404d98a9 781 SUPERFAMILY SSF49464 28 113 2.94E-12 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_1471 6abf1b581c684b51f1b25f22404d98a9 781 Pfam PF13715 CarboxypepD_reg-like domain 29 116 7.6E-20 T 11-10-2018 TF3313_1471 6abf1b581c684b51f1b25f22404d98a9 781 Pfam PF07715 TonB-dependent Receptor Plug Domain 125 229 9.1E-20 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_1471 6abf1b581c684b51f1b25f22404d98a9 781 Gene3D G3DSA:2.40.170.20 270 779 5.1E-30 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_1471 6abf1b581c684b51f1b25f22404d98a9 781 SUPERFAMILY SSF56935 113 778 2.32E-68 T 11-10-2018 TF3313_1355 167ddfff6b2d44dc83d26a3220a42113 430 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 272 422 3.4E-69 T 11-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain TF3313_1355 167ddfff6b2d44dc83d26a3220a42113 430 Gene3D G3DSA:3.40.1080.20 290 430 5.3E-66 T 11-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily TF3313_1355 167ddfff6b2d44dc83d26a3220a42113 430 Gene3D G3DSA:3.40.1080.10 1 184 7.9E-66 T 11-10-2018 TF3313_1355 167ddfff6b2d44dc83d26a3220a42113 430 Gene3D G3DSA:3.30.750.70 185 289 3.1E-45 T 11-10-2018 TF3313_1355 167ddfff6b2d44dc83d26a3220a42113 430 SUPERFAMILY SSF100950 190 425 3.87E-70 T 11-10-2018 IPR037171 NagB/RpiA transferase-like TF3313_1355 167ddfff6b2d44dc83d26a3220a42113 430 SUPERFAMILY SSF100950 3 223 1.19E-46 T 11-10-2018 IPR037171 NagB/RpiA transferase-like TF3313_1355 167ddfff6b2d44dc83d26a3220a42113 430 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 5 180 1.1E-26 T 11-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 TF3313_1633 1f5b3086c9389d2b053aeaf8f3050ad5 548 Gene3D G3DSA:3.40.50.2030 379 548 1.1E-60 T 11-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 TF3313_1633 1f5b3086c9389d2b053aeaf8f3050ad5 548 Pfam PF03063 Prismane/CO dehydrogenase family 5 545 5.6E-171 T 11-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 TF3313_1633 1f5b3086c9389d2b053aeaf8f3050ad5 548 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 5 545 1.9E-220 T 11-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 TF3313_1633 1f5b3086c9389d2b053aeaf8f3050ad5 548 Gene3D G3DSA:3.40.50.2030 228 378 7.7E-65 T 11-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 TF3313_1633 1f5b3086c9389d2b053aeaf8f3050ad5 548 PIRSF PIRSF000076 5 548 1.5E-249 T 11-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 TF3313_1633 1f5b3086c9389d2b053aeaf8f3050ad5 548 SUPERFAMILY SSF56821 4 545 2.88E-198 T 11-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 TF3313_1633 1f5b3086c9389d2b053aeaf8f3050ad5 548 Gene3D G3DSA:1.20.1270.20 143 226 1.8E-30 T 11-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 TF3313_1633 1f5b3086c9389d2b053aeaf8f3050ad5 548 Hamap MF_00069 Hydroxylamine reductase [hcp]. 5 547 22.745 T 11-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 TF3313_1633 1f5b3086c9389d2b053aeaf8f3050ad5 548 Gene3D G3DSA:1.20.1270.20 2 142 8.5E-38 T 11-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 TF3313_2053 90a7ca16eb749e97d0e39e9cf56c1a5d 311 Pfam PF12762 ISXO2-like transposase domain 126 283 1.4E-21 T 11-10-2018 IPR024445 ISXO2-like transposase domain TF3313_2053 90a7ca16eb749e97d0e39e9cf56c1a5d 311 SMART SM01126 125 283 1.8E-15 T 11-10-2018 IPR024445 ISXO2-like transposase domain TF3313_2053 90a7ca16eb749e97d0e39e9cf56c1a5d 311 Pfam PF12760 Transposase zinc-ribbon domain 11 55 1.3E-6 T 11-10-2018 IPR024442 Transposase, zinc-ribbon TF3313_2803 90a7ca16eb749e97d0e39e9cf56c1a5d 311 Pfam PF12762 ISXO2-like transposase domain 126 283 1.4E-21 T 11-10-2018 IPR024445 ISXO2-like transposase domain TF3313_2803 90a7ca16eb749e97d0e39e9cf56c1a5d 311 SMART SM01126 125 283 1.8E-15 T 11-10-2018 IPR024445 ISXO2-like transposase domain TF3313_2803 90a7ca16eb749e97d0e39e9cf56c1a5d 311 Pfam PF12760 Transposase zinc-ribbon domain 11 55 1.3E-6 T 11-10-2018 IPR024442 Transposase, zinc-ribbon TF3313_0573 eec1d448572b394187442ebe16dbaa1b 135 Gene3D G3DSA:3.30.2020.20 7 66 1.0E-6 T 11-10-2018 TF3313_0573 eec1d448572b394187442ebe16dbaa1b 135 SUPERFAMILY SSF47413 77 121 8.89E-6 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TF3313_0573 eec1d448572b394187442ebe16dbaa1b 135 Pfam PF10387 Protein of unknown function (DUF2442) 4 70 1.8E-11 T 11-10-2018 IPR018841 Protein of unknown function DUF2442 TF3313_2071 b01153e4ce969b20c2570df9841156fd 452 Pfam PF16411 Outer membrane protein SusF_SusE 365 446 1.0E-6 T 11-10-2018 IPR032187 Outer membrane protein SusF/SusE GO:0019867|GO:2001070 TF3313_2071 b01153e4ce969b20c2570df9841156fd 452 Pfam PF17142 Domain of unknown function (DUF5115) 13 261 3.5E-13 T 11-10-2018 IPR033408 Domain of unknown function DUF5115 TF3313_2071 b01153e4ce969b20c2570df9841156fd 452 Gene3D G3DSA:2.60.40.3620 143 263 2.7E-10 T 11-10-2018 TF3313_0457 9b5f701bdaa1617b0f554eea1992f4a6 330 Gene3D G3DSA:3.55.50.30 243 314 1.8E-15 T 11-10-2018 TF3313_0457 9b5f701bdaa1617b0f554eea1992f4a6 330 Pfam PF16344 Domain of unknown function (DUF4974) 216 312 4.2E-23 T 11-10-2018 IPR032508 Protein FecR, C-terminal TF3313_0457 9b5f701bdaa1617b0f554eea1992f4a6 330 PIRSF PIRSF018266 1 324 3.8E-64 T 11-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component TF3313_0457 9b5f701bdaa1617b0f554eea1992f4a6 330 Pfam PF04773 FecR protein 111 202 3.1E-12 T 11-10-2018 IPR006860 FecR protein TF3313_0457 9b5f701bdaa1617b0f554eea1992f4a6 330 Gene3D G3DSA:2.60.120.1440 93 242 1.9E-34 T 11-10-2018 TF3313_2318 19ac5b500eab25b2c81ea48b357fa550 432 SUPERFAMILY SSF49299 254 332 4.05E-5 T 11-10-2018 IPR035986 PKD domain superfamily TF3313_2318 19ac5b500eab25b2c81ea48b357fa550 432 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 336 413 6.2E-13 T 11-10-2018 IPR026341 Gliding motility-associated, C-terminal domain TF3313_2318 19ac5b500eab25b2c81ea48b357fa550 432 Pfam PF13585 C-terminal domain of CHU protein family 335 418 2.3E-17 T 11-10-2018 TF3313_0858 60b6b2efa2911ebb8801bdf20c39b7e0 162 Gene3D G3DSA:1.10.10.10 88 162 3.7E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_0858 60b6b2efa2911ebb8801bdf20c39b7e0 162 Gene3D G3DSA:1.10.1740.10 1 78 1.1E-11 T 11-10-2018 TF3313_0858 60b6b2efa2911ebb8801bdf20c39b7e0 162 Pfam PF04542 Sigma-70 region 2 13 73 2.0E-12 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_0858 60b6b2efa2911ebb8801bdf20c39b7e0 162 SUPERFAMILY SSF88946 4 91 2.28E-15 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_0858 60b6b2efa2911ebb8801bdf20c39b7e0 162 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 5 158 1.2E-24 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TF3313_0858 60b6b2efa2911ebb8801bdf20c39b7e0 162 Pfam PF08281 Sigma-70, region 4 105 156 5.8E-13 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TF3313_0858 60b6b2efa2911ebb8801bdf20c39b7e0 162 SUPERFAMILY SSF88659 86 160 7.1E-16 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TF3313_2302 1b2f23a8690c2a3f1ce5b0aad6afc8e8 109 Pfam PF07883 Cupin domain 39 97 4.2E-11 T 11-10-2018 IPR013096 Cupin 2, conserved barrel TF3313_2302 1b2f23a8690c2a3f1ce5b0aad6afc8e8 109 Gene3D G3DSA:2.60.120.10 1 109 2.7E-34 T 11-10-2018 IPR014710 RmlC-like jelly roll fold TF3313_2302 1b2f23a8690c2a3f1ce5b0aad6afc8e8 109 SUPERFAMILY SSF51182 5 105 2.94E-23 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily TF3313_2945 5fd20bc8601575eef5ccec3cf5c5a7c7 339 SUPERFAMILY SSF53067 147 336 2.1E-47 T 11-10-2018 TF3313_2945 5fd20bc8601575eef5ccec3cf5c5a7c7 339 Pfam PF06723 MreB/Mbl protein 8 334 4.3E-122 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TF3313_2945 5fd20bc8601575eef5ccec3cf5c5a7c7 339 SUPERFAMILY SSF53067 8 145 2.76E-29 T 11-10-2018 TF3313_2945 5fd20bc8601575eef5ccec3cf5c5a7c7 339 Gene3D G3DSA:3.30.420.40 10 326 4.2E-111 T 11-10-2018 TF3313_2945 5fd20bc8601575eef5ccec3cf5c5a7c7 339 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 6 335 1.6E-118 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TF3313_2945 5fd20bc8601575eef5ccec3cf5c5a7c7 339 Gene3D G3DSA:3.30.420.40 151 316 4.2E-111 T 11-10-2018 TF3313_2945 5fd20bc8601575eef5ccec3cf5c5a7c7 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 64 87 4.2E-44 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TF3313_2945 5fd20bc8601575eef5ccec3cf5c5a7c7 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 129 148 4.2E-44 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TF3313_2945 5fd20bc8601575eef5ccec3cf5c5a7c7 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 44 62 4.2E-44 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TF3313_2945 5fd20bc8601575eef5ccec3cf5c5a7c7 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 299 325 4.2E-44 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TF3313_2945 5fd20bc8601575eef5ccec3cf5c5a7c7 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 184 204 4.2E-44 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TF3313_2945 5fd20bc8601575eef5ccec3cf5c5a7c7 339 Gene3D G3DSA:3.90.640.10 183 258 4.2E-111 T 11-10-2018 TF3313_1692 a8d9eef89d5ea034b4b85056e2bff197 125 Gene3D G3DSA:3.30.1330.40 1 125 5.4E-54 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 TF3313_1692 a8d9eef89d5ea034b4b85056e2bff197 125 SUPERFAMILY SSF55298 1 125 1.1E-47 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 TF3313_1692 a8d9eef89d5ea034b4b85056e2bff197 125 Pfam PF01042 Endoribonuclease L-PSP 8 124 1.1E-43 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 TF3313_1692 a8d9eef89d5ea034b4b85056e2bff197 125 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 124 7.9E-53 T 11-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 TF3313_1356 1497ac7ef5bd35d1cd2ce0aa82890053 371 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 250 270 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 TF3313_1356 1497ac7ef5bd35d1cd2ce0aa82890053 371 Pfam PF00465 Iron-containing alcohol dehydrogenase 59 363 9.5E-68 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 TF3313_1356 1497ac7ef5bd35d1cd2ce0aa82890053 371 Gene3D G3DSA:1.20.1090.10 173 370 4.6E-46 T 11-10-2018 TF3313_1356 1497ac7ef5bd35d1cd2ce0aa82890053 371 SUPERFAMILY SSF56796 30 369 3.27E-70 T 11-10-2018 TF3313_1356 1497ac7ef5bd35d1cd2ce0aa82890053 371 Gene3D G3DSA:3.40.50.1970 24 172 1.3E-20 T 11-10-2018 TF3313_2955 5fe1c7c040630895536609c8b1c12229 94 ProSitePatterns PS00057 Ribosomal protein S18 signature. 39 62 - T 11-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2955 5fe1c7c040630895536609c8b1c12229 94 TIGRFAM TIGR00165 S18: ribosomal protein bS18 24 91 1.1E-33 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2955 5fe1c7c040630895536609c8b1c12229 94 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 20 91 21.857 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2955 5fe1c7c040630895536609c8b1c12229 94 Pfam PF01084 Ribosomal protein S18 36 86 5.3E-26 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2955 5fe1c7c040630895536609c8b1c12229 94 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 38 89 1.0E-16 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2955 5fe1c7c040630895536609c8b1c12229 94 Gene3D G3DSA:4.10.640.10 6 94 5.0E-28 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2955 5fe1c7c040630895536609c8b1c12229 94 PRINTS PR00974 Ribosomal protein S18 family signature 64 78 1.2E-19 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2955 5fe1c7c040630895536609c8b1c12229 94 PRINTS PR00974 Ribosomal protein S18 family signature 46 56 1.2E-19 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2955 5fe1c7c040630895536609c8b1c12229 94 PRINTS PR00974 Ribosomal protein S18 family signature 78 88 1.2E-19 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2955 5fe1c7c040630895536609c8b1c12229 94 PRINTS PR00974 Ribosomal protein S18 family signature 56 63 1.2E-19 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2955 5fe1c7c040630895536609c8b1c12229 94 SUPERFAMILY SSF46911 19 91 6.93E-29 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_0722 a66709bb6640c28c427321e70e84b281 254 Gene3D G3DSA:3.40.50.300 1 254 1.2E-80 T 11-10-2018 TF3313_0722 a66709bb6640c28c427321e70e84b281 254 PIRSF PIRSF009320 2 50 1.4E-13 T 11-10-2018 TF3313_0722 a66709bb6640c28c427321e70e84b281 254 PIRSF PIRSF009320 92 254 8.4E-10 T 11-10-2018 TF3313_0722 a66709bb6640c28c427321e70e84b281 254 Pfam PF13614 AAA domain 2 178 3.6E-72 T 11-10-2018 IPR025669 AAA domain TF3313_0722 a66709bb6640c28c427321e70e84b281 254 SUPERFAMILY SSF52540 1 252 4.71E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0453 886ee953591822bb0055ec3ebb1027ab 959 Gene3D G3DSA:2.60.120.260 798 958 5.5E-15 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_0453 886ee953591822bb0055ec3ebb1027ab 959 SUPERFAMILY SSF49785 799 957 3.68E-16 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_0453 886ee953591822bb0055ec3ebb1027ab 959 Pfam PF17132 alpha-L-rhamnosidase 48 139 1.3E-8 T 11-10-2018 IPR033400 Alpha-L-rhamnosidase RhaM TF3313_0453 886ee953591822bb0055ec3ebb1027ab 959 Pfam PF17132 alpha-L-rhamnosidase 207 771 2.0E-46 T 11-10-2018 IPR033400 Alpha-L-rhamnosidase RhaM TF3313_1092 7a806acf6d2ee822e1c278f532853ff1 323 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 47 177 2.8E-63 T 11-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 TF3313_1092 7a806acf6d2ee822e1c278f532853ff1 323 Gene3D G3DSA:1.10.8.300 215 319 4.3E-33 T 11-10-2018 TF3313_1092 7a806acf6d2ee822e1c278f532853ff1 323 Gene3D G3DSA:3.40.50.300 8 214 1.8E-47 T 11-10-2018 TF3313_1092 7a806acf6d2ee822e1c278f532853ff1 323 SUPERFAMILY SSF52540 17 294 9.77E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1092 7a806acf6d2ee822e1c278f532853ff1 323 PIRSF PIRSF002849 1 323 4.7E-131 T 11-10-2018 TF3313_1121 42dade3f9ad7c7562d6a7dfd87cbb94e 263 SMART SM00560 102 255 9.0E-4 T 11-10-2018 IPR006558 LamG-like jellyroll fold TF3313_1121 42dade3f9ad7c7562d6a7dfd87cbb94e 263 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 85 258 1.9E-21 T 11-10-2018 TF3313_1121 42dade3f9ad7c7562d6a7dfd87cbb94e 263 Gene3D G3DSA:2.60.120.200 44 263 4.1E-25 T 11-10-2018 TF3313_1121 42dade3f9ad7c7562d6a7dfd87cbb94e 263 SUPERFAMILY SSF49899 42 262 6.97E-25 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily TF3313_2127 e41ff7aacd7e8e2e6709dfdab0f1a8d4 266 Pfam PF01881 CRISPR associated protein Cas6 105 256 3.6E-29 T 11-10-2018 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 TF3313_2127 e41ff7aacd7e8e2e6709dfdab0f1a8d4 266 TIGRFAM TIGR01877 cas_cas6: CRISPR-associated endoribonuclease Cas6 52 256 5.6E-43 T 11-10-2018 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 TF3313_2127 e41ff7aacd7e8e2e6709dfdab0f1a8d4 266 PIRSF PIRSF005054 1 261 1.1E-51 T 11-10-2018 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 TF3313_2127 e41ff7aacd7e8e2e6709dfdab0f1a8d4 266 Gene3D G3DSA:3.30.70.1890 1 135 1.7E-19 T 11-10-2018 TF3313_2127 e41ff7aacd7e8e2e6709dfdab0f1a8d4 266 Gene3D G3DSA:3.30.70.1900 138 259 5.8E-22 T 11-10-2018 TF3313_1865 b3820048d9c5dabc454eef21d3006964 346 Pfam PF17170 6-bladed beta-propeller 19 136 7.3E-11 T 11-10-2018 TF3313_2319 040a85769209abfe417bdefb5845ad09 324 SUPERFAMILY SSF53955 95 241 8.44E-32 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily TF3313_2319 040a85769209abfe417bdefb5845ad09 324 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 116 144 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 TF3313_2319 040a85769209abfe417bdefb5845ad09 324 Gene3D G3DSA:1.10.530.10 91 239 8.5E-29 T 11-10-2018 TF3313_2319 040a85769209abfe417bdefb5845ad09 324 Pfam PF01464 Transglycosylase SLT domain 110 205 1.2E-22 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 TF3313_1134 6a96f032dc975733743106c075ec2d40 283 Gene3D G3DSA:1.10.10.10 193 281 1.5E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_1134 6a96f032dc975733743106c075ec2d40 283 SMART SM00421 216 273 3.0E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TF3313_1134 6a96f032dc975733743106c075ec2d40 283 SUPERFAMILY SSF46894 206 279 2.38E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TF3313_1134 6a96f032dc975733743106c075ec2d40 283 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 219 233 3.0E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TF3313_1134 6a96f032dc975733743106c075ec2d40 283 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 233 249 3.0E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TF3313_1134 6a96f032dc975733743106c075ec2d40 283 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 249 261 3.0E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TF3313_1134 6a96f032dc975733743106c075ec2d40 283 Pfam PF00196 Bacterial regulatory proteins, luxR family 218 272 3.6E-17 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TF3313_1134 6a96f032dc975733743106c075ec2d40 283 ProSitePatterns PS00622 LuxR-type HTH domain signature. 233 260 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TF3313_0533 49e22c8cbd4c091736c06d5dba334781 333 Pfam PF13421 SPFH domain-Band 7 family 27 235 3.6E-40 T 11-10-2018 IPR033880 SPFH domain, YdjI-like TF3313_1242 f69bc8c32e2e1691f376fc82e3b37a23 310 Pfam PF07751 Abi-like protein 33 225 1.5E-51 T 11-10-2018 IPR011664 Abortive infection system protein AbiD/AbiF-like TF3313_1242 f69bc8c32e2e1691f376fc82e3b37a23 310 PIRSF PIRSF034934 1 308 4.6E-57 T 11-10-2018 IPR017034 Abortive infection system protein AbiD/AbiF TF3313_0115 39d0a3ce0ecee3422d68ddc816db84a1 208 Pfam PF00293 NUDIX domain 70 135 7.0E-12 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 TF3313_0115 39d0a3ce0ecee3422d68ddc816db84a1 208 Pfam PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal 6 57 3.3E-10 T 11-10-2018 TF3313_0115 39d0a3ce0ecee3422d68ddc816db84a1 208 Gene3D G3DSA:3.90.79.10 47 208 4.9E-36 T 11-10-2018 TF3313_0115 39d0a3ce0ecee3422d68ddc816db84a1 208 SUPERFAMILY SSF55811 64 196 7.58E-27 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TF3313_1864 6b95fc635f587c3a8eaaac6955a47c34 80 Pfam PF16118 Domain of unknown function (DUF4834) 2 80 2.0E-8 T 11-10-2018 IPR032272 Protein of unknown function DUF4834 TF3313_2223 48bd72b2ffa320c64f218aa851c9b0dc 293 Pfam PF11276 Protein of unknown function (DUF3078) 39 128 1.8E-26 T 11-10-2018 IPR021428 Protein of unknown function DUF3078 TF3313_1386 2b25a251872b7162e46c6f480bb0ac4d 367 Gene3D G3DSA:3.60.10.10 23 341 1.2E-31 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TF3313_1386 2b25a251872b7162e46c6f480bb0ac4d 367 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 29 331 3.0E-8 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase TF3313_1386 2b25a251872b7162e46c6f480bb0ac4d 367 SUPERFAMILY SSF56219 21 342 2.62E-27 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TF3313_0544 c1696003e6a891d4ef27b9c3fe1986ba 563 Pfam PF14322 Starch-binding associating with outer membrane 12 207 1.1E-25 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_0544 c1696003e6a891d4ef27b9c3fe1986ba 563 Gene3D G3DSA:1.25.40.390 10 557 2.8E-137 T 11-10-2018 TF3313_0544 c1696003e6a891d4ef27b9c3fe1986ba 563 Pfam PF07980 SusD family 262 562 1.9E-54 T 11-10-2018 IPR012944 RagB/SusD domain TF3313_0544 c1696003e6a891d4ef27b9c3fe1986ba 563 SUPERFAMILY SSF48452 9 562 5.31E-127 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2937 ad66ecd15954a99b8ec436fda188b4fa 65 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 7 65 19.165 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 TF3313_2937 ad66ecd15954a99b8ec436fda188b4fa 65 Pfam PF02416 mttA/Hcf106 family 10 57 6.9E-18 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 TF3313_2937 ad66ecd15954a99b8ec436fda188b4fa 65 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 10 54 8.8E-19 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 TF3313_1011 4c3483fb94fe518bfe860c7d0872ab7e 376 SUPERFAMILY SSF55729 6 340 2.18E-20 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TF3313_1011 4c3483fb94fe518bfe860c7d0872ab7e 376 Gene3D G3DSA:3.40.630.30 33 357 7.6E-11 T 11-10-2018 TF3313_0747 efe7367bad6bf06192cb5de3a5ff6dfb 499 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 141 157 - T 11-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 TF3313_0747 efe7367bad6bf06192cb5de3a5ff6dfb 499 Gene3D G3DSA:1.20.200.10 200 498 2.1E-110 T 11-10-2018 TF3313_0747 efe7367bad6bf06192cb5de3a5ff6dfb 499 SUPERFAMILY SSF48557 2 495 3.14E-179 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 TF3313_0747 efe7367bad6bf06192cb5de3a5ff6dfb 499 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 7 496 9.7E-174 T 11-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TF3313_0747 efe7367bad6bf06192cb5de3a5ff6dfb 499 Gene3D G3DSA:1.10.275.10 1 199 6.0E-55 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal TF3313_0747 efe7367bad6bf06192cb5de3a5ff6dfb 499 Pfam PF00221 Aromatic amino acid lyase 12 469 3.0E-177 T 11-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 TF3313_0609 9d113d447dbaf6bbcd2da520ae24fead 147 SUPERFAMILY SSF53927 12 141 6.19E-35 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 TF3313_0609 9d113d447dbaf6bbcd2da520ae24fead 147 Gene3D G3DSA:3.40.140.10 5 139 1.5E-41 T 11-10-2018 TF3313_0609 9d113d447dbaf6bbcd2da520ae24fead 147 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 72 107 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 TF3313_0609 9d113d447dbaf6bbcd2da520ae24fead 147 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 10 118 1.1E-25 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain TF3313_0609 9d113d447dbaf6bbcd2da520ae24fead 147 PIRSF PIRSF006019 1 147 2.8E-46 T 11-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 TF3313_2431 29f3084e0ae37f380852c518d616cd99 393 PIRSF PIRSF036428 1 392 2.4E-97 T 11-10-2018 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase GO:0008276|GO:0009236 KEGG: 00860+2.1.1.132 TF3313_2431 29f3084e0ae37f380852c518d616cd99 393 SUPERFAMILY SSF53790 3 206 2.78E-27 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 TF3313_2431 29f3084e0ae37f380852c518d616cd99 393 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 63 187 3.9E-9 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 TF3313_2431 29f3084e0ae37f380852c518d616cd99 393 Gene3D G3DSA:3.40.1010.10 1 102 2.6E-8 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 TF3313_2431 29f3084e0ae37f380852c518d616cd99 393 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 6 205 1.9E-44 T 11-10-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 TF3313_2431 29f3084e0ae37f380852c518d616cd99 393 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 233 354 2.0E-29 T 11-10-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00860+2.1.1.196|MetaCyc: PWY-7377 TF3313_2431 29f3084e0ae37f380852c518d616cd99 393 SUPERFAMILY SSF53335 234 357 3.8E-18 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_2431 29f3084e0ae37f380852c518d616cd99 393 Gene3D G3DSA:3.40.50.150 210 392 6.4E-41 T 11-10-2018 TF3313_0882 7c3b303eeaafb3c7f60e7f57b21df55f 291 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 229 283 5.9E-18 T 11-10-2018 IPR019264 Domain of unknown function DUF2179 TF3313_0882 7c3b303eeaafb3c7f60e7f57b21df55f 291 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 14 224 6.8E-58 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT TF3313_0882 7c3b303eeaafb3c7f60e7f57b21df55f 291 PIRSF PIRSF006483 2 290 3.2E-76 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT TF3313_0882 7c3b303eeaafb3c7f60e7f57b21df55f 291 Gene3D G3DSA:3.30.70.120 200 275 2.5E-21 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal TF3313_0839 43c4aa91e5abed3ac3be821ebdb82cf2 204 Pfam PF14063 Protein of unknown function (DUF4254) 43 184 2.8E-65 T 11-10-2018 IPR025350 Protein of unknown function DUF4254 TF3313_1025 af4df41a6e07cfd8b6ddc39df2b09beb 1085 Pfam PF13620 Carboxypeptidase regulatory-like domain 29 108 6.1E-16 T 11-10-2018 TF3313_1025 af4df41a6e07cfd8b6ddc39df2b09beb 1085 SUPERFAMILY SSF56935 108 886 3.39E-41 T 11-10-2018 TF3313_1025 af4df41a6e07cfd8b6ddc39df2b09beb 1085 Gene3D G3DSA:2.60.40.1120 28 109 4.6E-8 T 11-10-2018 TF3313_1025 af4df41a6e07cfd8b6ddc39df2b09beb 1085 Gene3D G3DSA:2.40.170.20 321 693 2.8E-17 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_1025 af4df41a6e07cfd8b6ddc39df2b09beb 1085 SUPERFAMILY SSF49464 28 118 9.61E-13 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_1733 5bbbf70db4d5636b576ee897885c5d30 402 Pfam PF02661 Fic/DOC family 115 232 1.4E-22 T 11-10-2018 IPR003812 Fido domain TF3313_1733 5bbbf70db4d5636b576ee897885c5d30 402 SUPERFAMILY SSF140931 91 299 5.36E-34 T 11-10-2018 IPR036597 Fido-like domain superfamily TF3313_1733 5bbbf70db4d5636b576ee897885c5d30 402 Gene3D G3DSA:1.10.10.10 316 376 7.6E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_1733 5bbbf70db4d5636b576ee897885c5d30 402 SUPERFAMILY SSF46785 317 372 3.45E-8 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TF3313_1733 5bbbf70db4d5636b576ee897885c5d30 402 Pfam PF13412 Winged helix-turn-helix DNA-binding 322 362 4.2E-8 T 11-10-2018 TF3313_1733 5bbbf70db4d5636b576ee897885c5d30 402 Gene3D G3DSA:1.10.3290.10 24 302 5.4E-73 T 11-10-2018 IPR036597 Fido-like domain superfamily TF3313_1204 d1e1422ecc58c9e457e0f8236f6ec9b8 310 SUPERFAMILY SSF50249 1 66 1.58E-8 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TF3313_1204 d1e1422ecc58c9e457e0f8236f6ec9b8 310 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 44 298 1.3E-64 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 TF3313_1204 d1e1422ecc58c9e457e0f8236f6ec9b8 310 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 1 305 34.996 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 TF3313_1204 d1e1422ecc58c9e457e0f8236f6ec9b8 310 Pfam PF03193 RsgA GTPase 65 239 1.3E-50 T 11-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 TF3313_1204 d1e1422ecc58c9e457e0f8236f6ec9b8 310 Gene3D G3DSA:1.10.40.50 241 310 2.1E-23 T 11-10-2018 TF3313_1204 d1e1422ecc58c9e457e0f8236f6ec9b8 310 Pfam PF16745 RsgA N-terminal domain 3 60 1.4E-13 T 11-10-2018 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal TF3313_1204 d1e1422ecc58c9e457e0f8236f6ec9b8 310 Gene3D G3DSA:3.40.50.300 67 239 7.2E-48 T 11-10-2018 TF3313_1204 d1e1422ecc58c9e457e0f8236f6ec9b8 310 Gene3D G3DSA:2.40.50.140 1 63 2.0E-9 T 11-10-2018 TF3313_1204 d1e1422ecc58c9e457e0f8236f6ec9b8 310 SUPERFAMILY SSF52540 81 305 1.95E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0636 1bebf7e731da4f55c04e64c02612ae73 349 Pfam PF00119 ATP synthase A chain 122 335 2.0E-51 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0636 1bebf7e731da4f55c04e64c02612ae73 349 Hamap MF_01393 ATP synthase subunit a [atpB]. 102 342 12.462 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0636 1bebf7e731da4f55c04e64c02612ae73 349 Gene3D G3DSA:1.20.120.220 170 342 4.1E-30 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0636 1bebf7e731da4f55c04e64c02612ae73 349 SUPERFAMILY SSF81336 169 335 1.83E-31 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0636 1bebf7e731da4f55c04e64c02612ae73 349 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 116 335 4.1E-35 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0636 1bebf7e731da4f55c04e64c02612ae73 349 PRINTS PR00123 ATP synthase A subunit signature 322 337 3.5E-21 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0636 1bebf7e731da4f55c04e64c02612ae73 349 PRINTS PR00123 ATP synthase A subunit signature 244 259 3.5E-21 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0636 1bebf7e731da4f55c04e64c02612ae73 349 PRINTS PR00123 ATP synthase A subunit signature 261 283 3.5E-21 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0636 1bebf7e731da4f55c04e64c02612ae73 349 PRINTS PR00123 ATP synthase A subunit signature 178 194 3.5E-21 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_1180 58e202388487828030272dbe69048856 141 PIRSF PIRSF003230 1 138 1.2E-19 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 TF3313_1180 58e202388487828030272dbe69048856 141 Pfam PF13279 Thioesterase-like superfamily 14 123 1.9E-7 T 11-10-2018 TF3313_1180 58e202388487828030272dbe69048856 141 Gene3D G3DSA:3.10.129.10 7 136 8.2E-26 T 11-10-2018 TF3313_1180 58e202388487828030272dbe69048856 141 SUPERFAMILY SSF54637 11 134 1.05E-27 T 11-10-2018 IPR029069 HotDog domain superfamily TF3313_1001 6b30d8174f53f633dff3d76a7de2b3da 212 SUPERFAMILY SSF102588 1 209 1.96E-40 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 TF3313_1001 6b30d8174f53f633dff3d76a7de2b3da 212 Pfam PF02585 GlcNAc-PI de-N-acetylase 5 115 5.0E-19 T 11-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 TF3313_1001 6b30d8174f53f633dff3d76a7de2b3da 212 Gene3D G3DSA:3.40.50.10320 1 212 9.7E-49 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 TF3313_2946 de221fd706c1255ea116e5d492517b09 283 Pfam PF04085 rod shape-determining protein MreC 118 264 1.3E-36 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 TF3313_2946 de221fd706c1255ea116e5d492517b09 283 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 64 270 1.1E-27 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 TF3313_2946 de221fd706c1255ea116e5d492517b09 283 Gene3D G3DSA:2.40.10.350 174 252 2.1E-37 T 11-10-2018 TF3313_2946 de221fd706c1255ea116e5d492517b09 283 Gene3D G3DSA:2.40.10.340 115 263 2.1E-37 T 11-10-2018 TF3313_0407 da5e91a59677f02284266e4556cca360 282 Pfam PF02498 BRO family, N-terminal domain 14 104 3.1E-7 T 11-10-2018 IPR003497 BRO N-terminal domain TF3313_0198 39e3dd432d733e1a4ff8ef0cf5da888b 200 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 197 2.4E-54 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TF3313_0198 39e3dd432d733e1a4ff8ef0cf5da888b 200 SUPERFAMILY SSF63380 91 198 1.02E-26 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel TF3313_0198 39e3dd432d733e1a4ff8ef0cf5da888b 200 SUPERFAMILY SSF63380 1 87 1.87E-23 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel TF3313_0198 39e3dd432d733e1a4ff8ef0cf5da888b 200 Pfam PF00677 Lumazine binding domain 98 187 7.7E-22 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TF3313_0198 39e3dd432d733e1a4ff8ef0cf5da888b 200 Pfam PF00677 Lumazine binding domain 3 84 3.1E-20 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TF3313_0198 39e3dd432d733e1a4ff8ef0cf5da888b 200 Gene3D G3DSA:2.40.30.20 1 87 4.8E-25 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TF3313_0198 39e3dd432d733e1a4ff8ef0cf5da888b 200 PIRSF PIRSF000498 1 200 7.4E-60 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TF3313_0198 39e3dd432d733e1a4ff8ef0cf5da888b 200 Gene3D G3DSA:2.40.30.20 100 200 1.1E-27 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TF3313_2810 6cb9571f9a096be7bc00f3f9787eb01a 756 Pfam PF13715 CarboxypepD_reg-like domain 4 92 2.3E-8 T 11-10-2018 TF3313_2810 6cb9571f9a096be7bc00f3f9787eb01a 756 Pfam PF14905 Outer membrane protein beta-barrel family 347 731 3.7E-56 T 11-10-2018 TF3313_2810 6cb9571f9a096be7bc00f3f9787eb01a 756 SUPERFAMILY SSF56935 86 735 1.13E-35 T 11-10-2018 TF3313_1282 a2f559b082356a06187526bfe9612056 314 Pfam PF00535 Glycosyl transferase family 2 6 152 1.0E-34 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TF3313_1282 a2f559b082356a06187526bfe9612056 314 Gene3D G3DSA:3.90.550.10 1 194 3.8E-38 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_1282 a2f559b082356a06187526bfe9612056 314 SUPERFAMILY SSF53448 3 179 4.93E-36 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_0619 863882ff2e423e6efbd53be2c3d2f40b 298 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 12 290 4.5E-37 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 TF3313_0714 a6a86b810e4164d275b7185e84e4880c 663 Gene3D G3DSA:2.170.130.10 30 144 3.4E-11 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_0714 a6a86b810e4164d275b7185e84e4880c 663 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 139 7.7E-6 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_0714 a6a86b810e4164d275b7185e84e4880c 663 Gene3D G3DSA:2.40.170.20 225 643 3.5E-9 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_0714 a6a86b810e4164d275b7185e84e4880c 663 Pfam PF14905 Outer membrane protein beta-barrel family 347 641 2.3E-29 T 11-10-2018 TF3313_0714 a6a86b810e4164d275b7185e84e4880c 663 SUPERFAMILY SSF56935 33 614 2.42E-41 T 11-10-2018 TF3313_2038 6ef83bd9efbf664e6eb3169fe9e18cf2 135 Pfam PF06250 Protein of unknown function (DUF1016) 19 97 1.1E-19 T 11-10-2018 IPR009362 Protein of unknown function DUF1016 TF3313_0037 c0141380d974b660ca276e2c60345d62 1029 SUPERFAMILY SSF49265 634 723 1.82E-8 T 11-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 TF3313_0037 c0141380d974b660ca276e2c60345d62 1029 SUPERFAMILY SSF53187 527 623 5.02E-7 T 11-10-2018 TF3313_0037 c0141380d974b660ca276e2c60345d62 1029 Gene3D G3DSA:3.40.630.40 466 626 3.2E-6 T 11-10-2018 TF3313_0037 c0141380d974b660ca276e2c60345d62 1029 Gene3D G3DSA:2.60.40.10 633 730 2.2E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_1868 57deb05b1fac068db8fb1bff0c9a40d1 384 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 5 381 47.133 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TF3313_1868 57deb05b1fac068db8fb1bff0c9a40d1 384 PIRSF PIRSF006205 2 384 3.0E-160 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TF3313_1868 57deb05b1fac068db8fb1bff0c9a40d1 384 Gene3D G3DSA:3.40.50.720 1 149 2.0E-54 T 11-10-2018 TF3313_1868 57deb05b1fac068db8fb1bff0c9a40d1 384 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3 380 7.1E-146 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TF3313_1868 57deb05b1fac068db8fb1bff0c9a40d1 384 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 145 228 3.7E-40 T 11-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TF3313_1868 57deb05b1fac068db8fb1bff0c9a40d1 384 Pfam PF13288 DXP reductoisomerase C-terminal domain 260 376 4.9E-41 T 11-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TF3313_1868 57deb05b1fac068db8fb1bff0c9a40d1 384 Gene3D G3DSA:1.10.1740.10 301 384 7.5E-25 T 11-10-2018 TF3313_1868 57deb05b1fac068db8fb1bff0c9a40d1 384 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 131 5.5E-47 T 11-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TF3313_1868 57deb05b1fac068db8fb1bff0c9a40d1 384 SUPERFAMILY SSF55347 125 263 1.77E-60 T 11-10-2018 TF3313_1868 57deb05b1fac068db8fb1bff0c9a40d1 384 SUPERFAMILY SSF51735 3 149 7.89E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_1868 57deb05b1fac068db8fb1bff0c9a40d1 384 SUPERFAMILY SSF69055 291 383 4.58E-29 T 11-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TF3313_2383 ee2fcc706f5948f8776f018e1dcd87cc 452 Gene3D G3DSA:3.30.70.360 194 364 1.9E-156 T 11-10-2018 TF3313_2383 ee2fcc706f5948f8776f018e1dcd87cc 452 Pfam PF07687 Peptidase dimerisation domain 192 351 8.4E-25 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain TF3313_2383 ee2fcc706f5948f8776f018e1dcd87cc 452 SUPERFAMILY SSF53187 2 450 3.14E-55 T 11-10-2018 TF3313_2383 ee2fcc706f5948f8776f018e1dcd87cc 452 Gene3D G3DSA:3.40.630.10 10 443 1.9E-156 T 11-10-2018 TF3313_2383 ee2fcc706f5948f8776f018e1dcd87cc 452 Pfam PF01546 Peptidase family M20/M25/M40 81 447 1.9E-31 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 TF3313_2136 9bbcc838820f3950391689a36918cfa6 176 Pfam PF01930 Domain of unknown function DUF83 5 172 5.9E-48 T 11-10-2018 IPR022765 Dna2/Cas4, domain of unknown function DUF83 TF3313_2136 9bbcc838820f3950391689a36918cfa6 176 Gene3D G3DSA:3.90.320.10 2 173 1.4E-12 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal TF3313_2136 9bbcc838820f3950391689a36918cfa6 176 TIGRFAM TIGR00372 cas4: CRISPR-associated protein Cas4 3 172 3.6E-26 T 11-10-2018 IPR013343 CRISPR-associated protein Cas4 TF3313_2094 f6371c9a6419f3fbfda9a273aa0e3784 641 Pfam PF07940 Heparinase II/III-like protein 410 579 4.0E-15 T 11-10-2018 IPR012480 Heparinase II/III-like GO:0016829 TF3313_2094 f6371c9a6419f3fbfda9a273aa0e3784 641 SUPERFAMILY SSF48230 196 342 1.74E-14 T 11-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 TF3313_2094 f6371c9a6419f3fbfda9a273aa0e3784 641 Gene3D G3DSA:1.50.10.100 30 391 8.2E-41 T 11-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 TF3313_2094 f6371c9a6419f3fbfda9a273aa0e3784 641 Gene3D G3DSA:2.70.98.70 403 553 8.8E-16 T 11-10-2018 TF3313_0372 5ba92b9eabb0ee7ef67194bc766df864 277 Gene3D G3DSA:3.20.20.150 10 277 6.3E-74 T 11-10-2018 TF3313_0372 5ba92b9eabb0ee7ef67194bc766df864 277 SUPERFAMILY SSF51658 22 272 1.93E-36 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily TF3313_0372 5ba92b9eabb0ee7ef67194bc766df864 277 Pfam PF01261 Xylose isomerase-like TIM barrel 43 220 1.2E-15 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain TF3313_0830 d81bf07b6df8c274c4dd481419adad45 323 Pfam PF04773 FecR protein 116 209 4.3E-18 T 11-10-2018 IPR006860 FecR protein TF3313_0830 d81bf07b6df8c274c4dd481419adad45 323 PIRSF PIRSF018266 1 323 2.4E-64 T 11-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component TF3313_0830 d81bf07b6df8c274c4dd481419adad45 323 Gene3D G3DSA:2.60.120.1440 102 245 1.5E-43 T 11-10-2018 TF3313_0830 d81bf07b6df8c274c4dd481419adad45 323 Gene3D G3DSA:3.55.50.30 248 323 5.1E-14 T 11-10-2018 TF3313_0830 d81bf07b6df8c274c4dd481419adad45 323 Pfam PF16344 Domain of unknown function (DUF4974) 221 318 2.1E-19 T 11-10-2018 IPR032508 Protein FecR, C-terminal TF3313_0952 80d48583a17ba39df5b989593cf0a2c9 356 SUPERFAMILY SSF50969 14 229 1.33E-10 T 11-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like TF3313_0952 80d48583a17ba39df5b989593cf0a2c9 356 Pfam PF17170 6-bladed beta-propeller 12 256 6.9E-21 T 11-10-2018 TF3313_0952 80d48583a17ba39df5b989593cf0a2c9 356 Gene3D G3DSA:2.120.10.30 65 251 1.6E-6 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TF3313_2933 7480cbc16e9525cb5094bca1deaa593f 396 Gene3D G3DSA:2.30.130.10 3 71 8.3E-24 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 TF3313_2933 7480cbc16e9525cb5094bca1deaa593f 396 Gene3D G3DSA:3.40.50.150 186 396 7.6E-66 T 11-10-2018 TF3313_2933 7480cbc16e9525cb5094bca1deaa593f 396 Gene3D G3DSA:3.30.750.80 72 183 8.7E-29 T 11-10-2018 TF3313_2933 7480cbc16e9525cb5094bca1deaa593f 396 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 175 345 5.9E-26 T 11-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 TF3313_2933 7480cbc16e9525cb5094bca1deaa593f 396 SMART SM00359 4 87 1.3E-7 T 11-10-2018 IPR002478 PUA domain GO:0003723 TF3313_2933 7480cbc16e9525cb5094bca1deaa593f 396 SUPERFAMILY SSF53335 89 393 4.55E-65 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_2933 7480cbc16e9525cb5094bca1deaa593f 396 SUPERFAMILY SSF88697 5 67 2.38E-12 T 11-10-2018 IPR015947 PUA-like superfamily TF3313_1114 89bffe699c364097991073c8d00eb123 40 Pfam PF13612 Transposase DDE domain 2 37 4.8E-11 T 11-10-2018 IPR025668 Transposase DDE domain TF3313_0594 35faec6b19f85c0214c92c7aeb438d78 199 Pfam PF14359 Domain of unknown function (DUF4406) 3 93 3.5E-12 T 11-10-2018 IPR025518 Protein of unknown function DUF4406 TF3313_0594 35faec6b19f85c0214c92c7aeb438d78 199 Gene3D G3DSA:1.10.1750.10 99 195 3.7E-11 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 TF3313_0594 35faec6b19f85c0214c92c7aeb438d78 199 SUPERFAMILY SSF52309 1 99 3.11E-6 T 11-10-2018 TF3313_0594 35faec6b19f85c0214c92c7aeb438d78 199 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 108 170 1.2E-7 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 TF3313_0594 35faec6b19f85c0214c92c7aeb438d78 199 SUPERFAMILY SSF48295 92 195 3.14E-12 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 TF3313_2911 fd20c61349c18feb49ed1c42d59bdb43 253 Pfam PF03883 Peroxide stress protein YaaA 1 241 1.5E-73 T 11-10-2018 IPR005583 Peroxide stress protein YaaA TF3313_2911 fd20c61349c18feb49ed1c42d59bdb43 253 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 253 28.376 T 11-10-2018 IPR005583 Peroxide stress protein YaaA TF3313_1080 c8de6caf6f4238b8d8cae456512d73b8 559 SUPERFAMILY SSF55186 73 233 6.41E-30 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 TF3313_1080 c8de6caf6f4238b8d8cae456512d73b8 559 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 297 494 6.9E-16 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 TF3313_1080 c8de6caf6f4238b8d8cae456512d73b8 559 Gene3D G3DSA:3.30.980.10 74 225 1.1E-19 T 11-10-2018 TF3313_1080 c8de6caf6f4238b8d8cae456512d73b8 559 Gene3D G3DSA:3.40.50.300 226 504 1.5E-59 T 11-10-2018 TF3313_1080 c8de6caf6f4238b8d8cae456512d73b8 559 SUPERFAMILY SSF52540 295 521 4.5E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1392 851622753809c8a53073ccc75713bf2f 477 SUPERFAMILY SSF56112 4 311 3.06E-42 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily TF3313_1392 851622753809c8a53073ccc75713bf2f 477 Gene3D G3DSA:3.30.200.20 3 87 9.9E-9 T 11-10-2018 TF3313_1392 851622753809c8a53073ccc75713bf2f 477 Pfam PF01636 Phosphotransferase enzyme family 20 253 1.1E-16 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase TF3313_1392 851622753809c8a53073ccc75713bf2f 477 Gene3D G3DSA:3.90.1200.10 88 339 6.1E-38 T 11-10-2018 TF3313_1392 851622753809c8a53073ccc75713bf2f 477 Pfam PF03668 P-loop ATPase protein family 330 465 7.0E-22 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 TF3313_0844 3e6a342cdc1a7a5dafe97aa7a24ae9fa 227 Gene3D G3DSA:2.40.160.170 30 223 9.2E-21 T 11-10-2018 TF3313_2027 d7d7b9572b4cf89543efe1ad63556a58 392 SUPERFAMILY SSF143631 84 387 1.22E-83 T 11-10-2018 IPR003374 ApbE-like superfamily TF3313_2027 d7d7b9572b4cf89543efe1ad63556a58 392 Pfam PF02424 ApbE family 93 367 1.8E-79 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 TF3313_2027 d7d7b9572b4cf89543efe1ad63556a58 392 Gene3D G3DSA:3.10.520.20 75 391 1.9E-92 T 11-10-2018 TF3313_2027 d7d7b9572b4cf89543efe1ad63556a58 392 PIRSF PIRSF006268 53 386 4.3E-84 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 TF3313_1451 ef5e676810f5e6289bcca8fa3941d03b 411 Pfam PF16215 Protein of unknown function (DUF4876) 210 395 8.5E-62 T 11-10-2018 IPR032627 Protein of unknown function DUF4876 TF3313_2459 97ea6e30b04c4ee92a1d75d7d40ea25b 548 Gene3D G3DSA:1.25.40.390 19 542 4.1E-118 T 11-10-2018 TF3313_2459 97ea6e30b04c4ee92a1d75d7d40ea25b 548 Pfam PF07980 SusD family 270 547 1.8E-44 T 11-10-2018 IPR012944 RagB/SusD domain TF3313_2459 97ea6e30b04c4ee92a1d75d7d40ea25b 548 SUPERFAMILY SSF48452 19 547 5.36E-105 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2459 97ea6e30b04c4ee92a1d75d7d40ea25b 548 Pfam PF14322 Starch-binding associating with outer membrane 22 225 2.2E-17 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_2745 201512943fd78e104ed437977ad5b981 115 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 108 1.1E-9 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain TF3313_2745 201512943fd78e104ed437977ad5b981 115 SUPERFAMILY SSF54593 1 110 1.01E-20 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TF3313_2745 201512943fd78e104ed437977ad5b981 115 Gene3D G3DSA:3.10.180.10 5 112 2.8E-18 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TF3313_2140 f9335c15e7ce33dd99cabccc88cc1bae 331 TIGRFAM TIGR01903 cas5_csm4: CRISPR type III-A/MTUBE-associated RAMP protein Csm4 7 312 5.9E-29 T 11-10-2018 IPR005510 CRISPR type III-associated RAMP protein Csm4 TF3313_0571 36b0ede2cc3ccd5c0f61c3b97babc870 243 SUPERFAMILY SSF54616 1 83 4.45E-8 T 11-10-2018 IPR036887 HTH APSES-type DNA-binding domain superfamily GO:0003677 TF3313_0571 36b0ede2cc3ccd5c0f61c3b97babc870 243 Pfam PF03374 Phage antirepressor protein KilAC domain 127 228 1.2E-28 T 11-10-2018 IPR005039 Antirepressor protein, C-terminal GO:0003677 TF3313_0571 36b0ede2cc3ccd5c0f61c3b97babc870 243 SMART SM01252 1 86 1.1E-18 T 11-10-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding TF3313_0571 36b0ede2cc3ccd5c0f61c3b97babc870 243 Pfam PF04383 KilA-N domain 1 84 1.9E-20 T 11-10-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding TF3313_1250 7e26a1e2930fe00228b7b06648740287 187 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 8 124 1.4E-8 T 11-10-2018 IPR012912 Plasmid pRiA4b, Orf3 TF3313_1250 7e26a1e2930fe00228b7b06648740287 187 SUPERFAMILY SSF159941 1 136 3.14E-28 T 11-10-2018 IPR024047 MM3350-like superfamily TF3313_1250 7e26a1e2930fe00228b7b06648740287 187 Gene3D G3DSA:3.10.290.30 2 136 3.4E-10 T 11-10-2018 IPR024047 MM3350-like superfamily TF3313_2089 6a7f36a6532fd07d3b5911f2219123ef 1041 Gene3D G3DSA:2.170.130.10 104 233 7.4E-25 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_2089 6a7f36a6532fd07d3b5911f2219123ef 1041 Pfam PF00593 TonB dependent receptor 424 1029 2.5E-33 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_2089 6a7f36a6532fd07d3b5911f2219123ef 1041 Pfam PF13715 CarboxypepD_reg-like domain 32 114 3.3E-20 T 11-10-2018 TF3313_2089 6a7f36a6532fd07d3b5911f2219123ef 1041 Gene3D G3DSA:2.40.170.20 309 819 2.2E-13 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_2089 6a7f36a6532fd07d3b5911f2219123ef 1041 Gene3D G3DSA:2.60.40.1120 31 103 5.5E-6 T 11-10-2018 TF3313_2089 6a7f36a6532fd07d3b5911f2219123ef 1041 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 204 234 3.8E-19 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_2089 6a7f36a6532fd07d3b5911f2219123ef 1041 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 30 1041 9.3E-277 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_2089 6a7f36a6532fd07d3b5911f2219123ef 1041 Pfam PF07715 TonB-dependent Receptor Plug Domain 122 228 5.8E-18 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_2089 6a7f36a6532fd07d3b5911f2219123ef 1041 SUPERFAMILY SSF49464 30 112 3.4E-19 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_2089 6a7f36a6532fd07d3b5911f2219123ef 1041 SUPERFAMILY SSF56935 110 1028 3.75E-81 T 11-10-2018 TF3313_0898 03f860f520875b9f1da0bb73759e41b3 197 Pfam PF02472 Biopolymer transport protein ExbD/TolR 3 147 9.1E-20 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 TF3313_1083 89c5047ad6c2397505659366c1595f7c 327 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 5 326 44.086 T 11-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 TF3313_1083 89c5047ad6c2397505659366c1595f7c 327 Gene3D G3DSA:3.40.50.450 8 294 1.5E-106 T 11-10-2018 TF3313_1083 89c5047ad6c2397505659366c1595f7c 327 SUPERFAMILY SSF53784 3 318 3.92E-111 T 11-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TF3313_1083 89c5047ad6c2397505659366c1595f7c 327 PIRSF PIRSF000532 4 326 2.9E-120 T 11-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 TF3313_1083 89c5047ad6c2397505659366c1595f7c 327 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 7 307 1.8E-129 T 11-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 TF3313_1083 89c5047ad6c2397505659366c1595f7c 327 Gene3D G3DSA:3.40.50.460 147 259 1.5E-106 T 11-10-2018 TF3313_1083 89c5047ad6c2397505659366c1595f7c 327 ProSitePatterns PS00433 Phosphofructokinase signature. 251 269 - T 11-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TF3313_1083 89c5047ad6c2397505659366c1595f7c 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 125 142 8.2E-79 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TF3313_1083 89c5047ad6c2397505659366c1595f7c 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 217 229 8.2E-79 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TF3313_1083 89c5047ad6c2397505659366c1595f7c 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 181 198 8.2E-79 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TF3313_1083 89c5047ad6c2397505659366c1595f7c 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 143 161 8.2E-79 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TF3313_1083 89c5047ad6c2397505659366c1595f7c 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 247 269 8.2E-79 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TF3313_1083 89c5047ad6c2397505659366c1595f7c 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 35 48 8.2E-79 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TF3313_1083 89c5047ad6c2397505659366c1595f7c 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 10 29 8.2E-79 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TF3313_1083 89c5047ad6c2397505659366c1595f7c 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 97 113 8.2E-79 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TF3313_1083 89c5047ad6c2397505659366c1595f7c 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 163 179 8.2E-79 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TF3313_1083 89c5047ad6c2397505659366c1595f7c 327 Pfam PF00365 Phosphofructokinase 8 283 1.7E-104 T 11-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TF3313_1980 72f7dcf4f03ca3436503822d9610aa34 487 Pfam PF00474 Sodium:solute symporter family 34 425 7.5E-16 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 TF3313_1980 72f7dcf4f03ca3436503822d9610aa34 487 Gene3D G3DSA:1.20.1730.10 23 483 8.4E-72 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily TF3313_1697 c99474c9b83c2f4c267fdf570ca0a44b 406 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 329 403 1.4E-9 T 11-10-2018 IPR026444 Secretion system C-terminal sorting domain TF3313_1697 c99474c9b83c2f4c267fdf570ca0a44b 406 Pfam PF13884 Chaperone of endosialidase 180 266 1.4E-11 T 11-10-2018 IPR030392 Intramolecular chaperone auto-processing domain TF3313_0266 b3fecff0e787b172c5c69d54a431d39d 296 SUPERFAMILY SSF53448 1 289 1.46E-88 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_0266 b3fecff0e787b172c5c69d54a431d39d 296 Gene3D G3DSA:3.90.550.10 1 295 1.5E-82 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_0266 b3fecff0e787b172c5c69d54a431d39d 296 Pfam PF00483 Nucleotidyl transferase 2 240 6.5E-68 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 TF3313_0266 b3fecff0e787b172c5c69d54a431d39d 296 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 288 6.0E-147 T 11-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 TF3313_1729 ea23ae1ce307f0a147ad675b72a42bd5 423 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 226 401 1.5E-28 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_1729 ea23ae1ce307f0a147ad675b72a42bd5 423 PRINTS PR00981 Seryl-tRNA synthetase signature 278 291 2.7E-19 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TF3313_1729 ea23ae1ce307f0a147ad675b72a42bd5 423 PRINTS PR00981 Seryl-tRNA synthetase signature 353 369 2.7E-19 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TF3313_1729 ea23ae1ce307f0a147ad675b72a42bd5 423 PRINTS PR00981 Seryl-tRNA synthetase signature 266 278 2.7E-19 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TF3313_1729 ea23ae1ce307f0a147ad675b72a42bd5 423 PRINTS PR00981 Seryl-tRNA synthetase signature 318 331 2.7E-19 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TF3313_1729 ea23ae1ce307f0a147ad675b72a42bd5 423 PRINTS PR00981 Seryl-tRNA synthetase signature 335 351 2.7E-19 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TF3313_1729 ea23ae1ce307f0a147ad675b72a42bd5 423 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 416 2.9E-127 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TF3313_1729 ea23ae1ce307f0a147ad675b72a42bd5 423 Gene3D G3DSA:3.30.930.10 109 423 6.2E-100 T 11-10-2018 TF3313_1729 ea23ae1ce307f0a147ad675b72a42bd5 423 Gene3D G3DSA:1.10.287.40 1 108 3.0E-17 T 11-10-2018 TF3313_1729 ea23ae1ce307f0a147ad675b72a42bd5 423 PIRSF PIRSF001529 1 422 7.9E-137 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TF3313_1729 ea23ae1ce307f0a147ad675b72a42bd5 423 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 111 2.3E-20 T 11-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 TF3313_1729 ea23ae1ce307f0a147ad675b72a42bd5 423 SUPERFAMILY SSF46589 1 116 2.35E-20 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 TF3313_1729 ea23ae1ce307f0a147ad675b72a42bd5 423 SUPERFAMILY SSF55681 122 421 5.17E-86 T 11-10-2018 TF3313_0340 668d4f7df5a6faad64aa6197c79781d6 371 Gene3D G3DSA:3.40.50.2000 167 350 2.4E-103 T 11-10-2018 TF3313_0340 668d4f7df5a6faad64aa6197c79781d6 371 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 3 362 4.6E-88 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TF3313_0340 668d4f7df5a6faad64aa6197c79781d6 371 SUPERFAMILY SSF53756 5 367 3.14E-98 T 11-10-2018 TF3313_0340 668d4f7df5a6faad64aa6197c79781d6 371 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 6 144 2.9E-34 T 11-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TF3313_0340 668d4f7df5a6faad64aa6197c79781d6 371 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 193 341 2.6E-33 T 11-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 TF3313_0340 668d4f7df5a6faad64aa6197c79781d6 371 Gene3D G3DSA:3.40.50.2000 7 356 2.4E-103 T 11-10-2018 TF3313_0340 668d4f7df5a6faad64aa6197c79781d6 371 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 6 366 31.204 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TF3313_0853 bf0df4c35b08cbbed3210d58fcdcd16e 297 Pfam PF01040 UbiA prenyltransferase family 40 262 3.4E-20 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 TF3313_0853 bf0df4c35b08cbbed3210d58fcdcd16e 297 Gene3D G3DSA:1.10.357.140 18 169 1.7E-9 T 11-10-2018 TF3313_0949 963c79a0ee20ca9c85b555bfbde0db72 188 Gene3D G3DSA:3.20.20.70 1 186 5.7E-10 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_0949 963c79a0ee20ca9c85b555bfbde0db72 188 SUPERFAMILY SSF102114 9 159 3.22E-8 T 11-10-2018 TF3313_1038 7d7a25c7a358d492d4049a934f7e3707 310 Hamap MF_01818 Ribonuclease BN [rbn]. 10 310 31.667 T 11-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 TF3313_1038 7d7a25c7a358d492d4049a934f7e3707 310 Gene3D G3DSA:3.60.15.10 10 310 2.8E-78 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TF3313_1038 7d7a25c7a358d492d4049a934f7e3707 310 SUPERFAMILY SSF56281 12 310 2.88E-64 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TF3313_1038 7d7a25c7a358d492d4049a934f7e3707 310 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 12 309 6.5E-91 T 11-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 TF3313_1038 7d7a25c7a358d492d4049a934f7e3707 310 Pfam PF12706 Beta-lactamase superfamily domain 41 278 2.5E-13 T 11-10-2018 IPR001279 Metallo-beta-lactamase TF3313_1650 b01fab4143902f1d0befd984cb0137dc 194 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 9 193 7.2E-40 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 TF3313_1650 b01fab4143902f1d0befd984cb0137dc 194 Pfam PF01300 Telomere recombination 18 194 5.8E-42 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 TF3313_1650 b01fab4143902f1d0befd984cb0137dc 194 Gene3D G3DSA:3.90.870.10 3 194 2.3E-47 T 11-10-2018 TF3313_1650 b01fab4143902f1d0befd984cb0137dc 194 SUPERFAMILY SSF55821 12 193 1.13E-40 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily TF3313_1942 8f63507dd7ac9de8c1d0e9f2f245e16c 60 Pfam PF05164 Cell division protein ZapA 11 53 5.6E-5 T 11-10-2018 IPR007838 Cell division protein ZapA-like TF3313_2443 bd5899b7fe01f05101587ebd40c0efeb 504 Pfam PF00854 POT family 273 467 6.2E-30 T 11-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 TF3313_2443 bd5899b7fe01f05101587ebd40c0efeb 504 Pfam PF00854 POT family 77 175 8.1E-18 T 11-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 TF3313_2443 bd5899b7fe01f05101587ebd40c0efeb 504 SUPERFAMILY SSF103473 227 501 1.57E-16 T 11-10-2018 IPR036259 MFS transporter superfamily TF3313_2443 bd5899b7fe01f05101587ebd40c0efeb 504 SUPERFAMILY SSF103473 3 168 2.09E-18 T 11-10-2018 IPR036259 MFS transporter superfamily TF3313_2443 bd5899b7fe01f05101587ebd40c0efeb 504 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 143 155 - T 11-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 TF3313_1283 3e46c7ccf77069639fab56196f34165b 126 Pfam PF04138 GtrA-like protein 12 119 2.6E-19 T 11-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 TF3313_2389 80d545a1c2692e03c57ba229db6e3193 446 SUPERFAMILY SSF51445 29 354 1.02E-89 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily TF3313_2389 80d545a1c2692e03c57ba229db6e3193 446 Gene3D G3DSA:2.60.40.1180 357 421 6.1E-112 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta TF3313_2389 80d545a1c2692e03c57ba229db6e3193 446 SMART SM00812 25 395 1.5E-124 T 11-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 TF3313_2389 80d545a1c2692e03c57ba229db6e3193 446 PIRSF PIRSF001092 1 440 1.6E-122 T 11-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 TF3313_2389 80d545a1c2692e03c57ba229db6e3193 446 Pfam PF01120 Alpha-L-fucosidase 19 351 1.2E-102 T 11-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 TF3313_2389 80d545a1c2692e03c57ba229db6e3193 446 PRINTS PR00741 Glycosyl hydrolase family 29 signature 195 211 1.1E-10 T 11-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 TF3313_2389 80d545a1c2692e03c57ba229db6e3193 446 PRINTS PR00741 Glycosyl hydrolase family 29 signature 101 117 1.1E-10 T 11-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 TF3313_2389 80d545a1c2692e03c57ba229db6e3193 446 PRINTS PR00741 Glycosyl hydrolase family 29 signature 306 327 1.1E-10 T 11-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 TF3313_2389 80d545a1c2692e03c57ba229db6e3193 446 PRINTS PR00741 Glycosyl hydrolase family 29 signature 339 361 1.1E-10 T 11-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 TF3313_2389 80d545a1c2692e03c57ba229db6e3193 446 Gene3D G3DSA:3.20.20.80 38 356 6.1E-112 T 11-10-2018 TF3313_1309 ce1442c2ba240adb1197b489cf12a978 235 Gene3D G3DSA:3.40.140.10 105 229 1.3E-37 T 11-10-2018 TF3313_1309 ce1442c2ba240adb1197b489cf12a978 235 TIGRFAM TIGR00608 radc: DNA repair protein RadC 15 229 8.6E-53 T 11-10-2018 IPR001405 Uncharacterised protein family UPF0758 TF3313_1309 ce1442c2ba240adb1197b489cf12a978 235 Pfam PF04002 RadC-like JAB domain 108 227 1.9E-36 T 11-10-2018 IPR025657 RadC-like JAB domain TF3313_1309 ce1442c2ba240adb1197b489cf12a978 235 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 178 183 - T 11-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site TF3313_0994 63548a39647924da44180f7f733629bc 371 SUPERFAMILY SSF52402 19 169 1.44E-10 T 11-10-2018 TF3313_0994 63548a39647924da44180f7f733629bc 371 TIGRFAM TIGR03573 WbuX: N-acetyl sugar amidotransferase 8 348 6.5E-99 T 11-10-2018 IPR020022 N-acetyl sugar amidotransferase TF3313_0994 63548a39647924da44180f7f733629bc 371 Gene3D G3DSA:3.40.50.620 6 208 3.8E-6 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_1258 9fe5a961893acbfdd90d628d4cc8b52f 245 Gene3D G3DSA:1.10.530.10 39 178 5.4E-39 T 11-10-2018 TF3313_1258 9fe5a961893acbfdd90d628d4cc8b52f 245 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 51 177 3.9E-21 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 TF3313_1258 9fe5a961893acbfdd90d628d4cc8b52f 245 SMART SM00047 35 182 3.9E-31 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 TF3313_0968 cb40d0c2f7f57fbcb88da8c85fb660e2 308 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 241 254 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 TF3313_0968 cb40d0c2f7f57fbcb88da8c85fb660e2 308 Pfam PF00294 pfkB family carbohydrate kinase 6 295 1.5E-32 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB TF3313_0968 cb40d0c2f7f57fbcb88da8c85fb660e2 308 SUPERFAMILY SSF53613 1 296 1.71E-48 T 11-10-2018 IPR029056 Ribokinase-like TF3313_0968 cb40d0c2f7f57fbcb88da8c85fb660e2 308 Gene3D G3DSA:3.40.1190.20 3 303 2.0E-49 T 11-10-2018 IPR029056 Ribokinase-like TF3313_0032 bc8ada89643c68861ea75bf34bd40f1b 1064 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 218 248 6.2E-15 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_0032 bc8ada89643c68861ea75bf34bd40f1b 1064 Gene3D G3DSA:2.170.130.10 95 247 4.1E-34 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_0032 bc8ada89643c68861ea75bf34bd40f1b 1064 SUPERFAMILY SSF49464 24 102 9.03E-18 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_0032 bc8ada89643c68861ea75bf34bd40f1b 1064 Gene3D G3DSA:2.60.40.1120 25 94 8.5E-7 T 11-10-2018 TF3313_0032 bc8ada89643c68861ea75bf34bd40f1b 1064 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 25 1064 1.5E-204 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_0032 bc8ada89643c68861ea75bf34bd40f1b 1064 Pfam PF07715 TonB-dependent Receptor Plug Domain 114 242 5.0E-20 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_0032 bc8ada89643c68861ea75bf34bd40f1b 1064 Pfam PF13715 CarboxypepD_reg-like domain 26 104 5.0E-18 T 11-10-2018 TF3313_0032 bc8ada89643c68861ea75bf34bd40f1b 1064 SUPERFAMILY SSF56935 100 1062 1.76E-83 T 11-10-2018 TF3313_0032 bc8ada89643c68861ea75bf34bd40f1b 1064 Pfam PF00593 TonB dependent receptor 424 1022 5.4E-24 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_1353 066030a05f4b55a417d40039eac7f0db 486 Gene3D G3DSA:1.20.140.10 277 481 3.9E-88 T 11-10-2018 TF3313_1353 066030a05f4b55a417d40039eac7f0db 486 SUPERFAMILY SSF56645 1 274 3.53E-90 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TF3313_1353 066030a05f4b55a417d40039eac7f0db 486 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 280 478 3.6E-79 T 11-10-2018 IPR024719 HpaB/PvcC/4-BUDH C-terminal TF3313_1353 066030a05f4b55a417d40039eac7f0db 486 SUPERFAMILY SSF47203 264 480 6.28E-75 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TF3313_1353 066030a05f4b55a417d40039eac7f0db 486 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 3 273 1.4E-105 T 11-10-2018 IPR024674 HpaB/PvcC/4-BUDH N-terminal TF3313_1353 066030a05f4b55a417d40039eac7f0db 486 Gene3D G3DSA:1.10.3140.10 1 142 1.3E-62 T 11-10-2018 TF3313_1353 066030a05f4b55a417d40039eac7f0db 486 Gene3D G3DSA:2.40.110.10 143 275 2.0E-48 T 11-10-2018 TF3313_1353 066030a05f4b55a417d40039eac7f0db 486 PIRSF PIRSF000331 1 486 5.7E-176 T 11-10-2018 IPR004925 HpaB/PvcC/4-BUDH TF3313_1389 aabc6485a599df33c0044d0e4c7f14e4 338 Pfam PF04773 FecR protein 116 211 2.0E-17 T 11-10-2018 IPR006860 FecR protein TF3313_1389 aabc6485a599df33c0044d0e4c7f14e4 338 PIRSF PIRSF018266 2 327 8.4E-62 T 11-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component TF3313_1389 aabc6485a599df33c0044d0e4c7f14e4 338 Pfam PF16344 Domain of unknown function (DUF4974) 226 320 9.7E-18 T 11-10-2018 IPR032508 Protein FecR, C-terminal TF3313_1389 aabc6485a599df33c0044d0e4c7f14e4 338 Gene3D G3DSA:3.55.50.30 254 324 4.2E-15 T 11-10-2018 TF3313_1389 aabc6485a599df33c0044d0e4c7f14e4 338 Gene3D G3DSA:2.60.120.1440 103 250 1.9E-40 T 11-10-2018 TF3313_0649 f80ae97b3b6b953469b55afe7c66b642 472 Gene3D G3DSA:3.40.50.1110 125 453 6.6E-70 T 11-10-2018 IPR036514 SGNH hydrolase superfamily TF3313_0649 f80ae97b3b6b953469b55afe7c66b642 472 SUPERFAMILY SSF52266 126 457 1.67E-16 T 11-10-2018 TF3313_0649 f80ae97b3b6b953469b55afe7c66b642 472 Gene3D G3DSA:2.60.120.1360 158 296 6.6E-70 T 11-10-2018 TF3313_0454 a9ef1c7f36e38e8ed56851419473e595 1125 SUPERFAMILY SSF49785 946 1063 2.38E-15 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_0454 a9ef1c7f36e38e8ed56851419473e595 1125 Gene3D G3DSA:2.60.120.260 938 1121 8.6E-14 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_0454 a9ef1c7f36e38e8ed56851419473e595 1125 Pfam PF17132 alpha-L-rhamnosidase 38 856 3.8E-184 T 11-10-2018 IPR033400 Alpha-L-rhamnosidase RhaM TF3313_2373 570179d9e3f44e5081795886859086cf 268 Pfam PF13525 Outer membrane lipoprotein 33 179 1.4E-15 T 11-10-2018 IPR039565 Outer membrane lipoprotein BamD-like TF3313_2373 570179d9e3f44e5081795886859086cf 268 SUPERFAMILY SSF48452 12 99 2.75E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2373 570179d9e3f44e5081795886859086cf 268 Gene3D G3DSA:1.25.40.10 18 267 1.6E-48 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2373 570179d9e3f44e5081795886859086cf 268 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 2 179 1.5E-23 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD TF3313_0302 54fb12d952a2d2be81466368a8f4c00a 345 SUPERFAMILY SSF50969 68 329 4.16E-9 T 11-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like TF3313_0302 54fb12d952a2d2be81466368a8f4c00a 345 Pfam PF17170 6-bladed beta-propeller 17 159 2.2E-15 T 11-10-2018 TF3313_2617 3b5cbd426299790b11b5fc199b7cc7de 219 SMART SM00240 2 53 9.0E-11 T 11-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 TF3313_2617 3b5cbd426299790b11b5fc199b7cc7de 219 SUPERFAMILY SSF49879 3 72 1.05E-21 T 11-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 TF3313_2617 3b5cbd426299790b11b5fc199b7cc7de 219 Gene3D G3DSA:2.60.200.20 1 88 2.5E-20 T 11-10-2018 TF3313_2617 3b5cbd426299790b11b5fc199b7cc7de 219 Pfam PF00498 FHA domain 4 67 5.1E-15 T 11-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 TF3313_1974 4b94c419112a3df952779bd54b4b82ad 218 Pfam PF14103 Domain of unknown function (DUF4276) 8 216 1.3E-54 T 11-10-2018 IPR025455 Protein of unknown function DUF4276 TF3313_2588 ebed430d94c6fe0505d9cb02bc3905d5 359 Gene3D G3DSA:3.90.550.10 3 352 5.1E-107 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_2588 ebed430d94c6fe0505d9cb02bc3905d5 359 SUPERFAMILY SSF53448 4 279 5.89E-65 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_2588 ebed430d94c6fe0505d9cb02bc3905d5 359 SUPERFAMILY SSF159283 285 347 5.49E-10 T 11-10-2018 TF3313_2588 ebed430d94c6fe0505d9cb02bc3905d5 359 Pfam PF00483 Nucleotidyl transferase 7 286 1.8E-42 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 TF3313_0520 faf85f825788a30995eaf6dea8ca30a0 289 ProDom PD181473 CT309 TC0583 CPN0087/CP0687/CPJ0087/CPB0087 1 269 2.0E-61 T 11-10-2018 TF3313_0520 faf85f825788a30995eaf6dea8ca30a0 289 Pfam PF10962 Protein of unknown function (DUF2764) 1 276 1.1E-103 T 11-10-2018 IPR024492 Protein of unknown function DUF2764 TF3313_0458 46223f111771f7b5b1732df01750a9fe 665 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 170 290 2.3E-5 T 11-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 TF3313_0458 46223f111771f7b5b1732df01750a9fe 665 Pfam PF00326 Prolyl oligopeptidase family 440 653 2.2E-34 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 TF3313_0458 46223f111771f7b5b1732df01750a9fe 665 Gene3D G3DSA:2.120.10.30 132 352 1.5E-14 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TF3313_0458 46223f111771f7b5b1732df01750a9fe 665 Gene3D G3DSA:3.40.50.1820 397 659 4.1E-49 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TF3313_0458 46223f111771f7b5b1732df01750a9fe 665 SUPERFAMILY SSF82171 43 327 1.18E-15 T 11-10-2018 TF3313_0458 46223f111771f7b5b1732df01750a9fe 665 SUPERFAMILY SSF53474 408 651 2.75E-46 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TF3313_0405 cad28bdc5ae2e9a31fc0cb22a70c3cc1 134 Gene3D G3DSA:3.10.450.50 4 130 2.2E-35 T 11-10-2018 TF3313_0405 cad28bdc5ae2e9a31fc0cb22a70c3cc1 134 SUPERFAMILY SSF54427 3 122 2.93E-25 T 11-10-2018 IPR032710 NTF2-like domain superfamily TF3313_0405 cad28bdc5ae2e9a31fc0cb22a70c3cc1 134 Pfam PF12680 SnoaL-like domain 8 113 4.0E-18 T 11-10-2018 IPR037401 SnoaL-like domain TF3313_1069 5c5a9b87bcdf55738e001a5d5a4eea99 614 Gene3D G3DSA:1.10.490.140 171 281 7.7E-11 T 11-10-2018 TF3313_1069 5c5a9b87bcdf55738e001a5d5a4eea99 614 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 57 409 1.1E-50 T 11-10-2018 IPR003776 YcaO-like domain TF3313_1069 5c5a9b87bcdf55738e001a5d5a4eea99 614 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 165 411 8.8E-25 T 11-10-2018 IPR003776 YcaO-like domain TF3313_2830 6004b03324b90787b60b21738fba5026 853 Pfam PF04233 Phage Mu protein F like protein 531 626 5.2E-17 T 11-10-2018 IPR006528 Phage head morphogenesis domain TF3313_2830 6004b03324b90787b60b21738fba5026 853 Pfam PF06074 Protein of unknown function (DUF935) 32 564 7.3E-35 T 11-10-2018 IPR009279 Protein of unknown function DUF935 TF3313_2830 6004b03324b90787b60b21738fba5026 853 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 530 628 2.5E-13 T 11-10-2018 IPR006528 Phage head morphogenesis domain TF3313_0765 935981b37f13a6af754dd0fc3b626b63 238 Gene3D G3DSA:3.40.50.150 34 218 3.9E-14 T 11-10-2018 TF3313_0765 935981b37f13a6af754dd0fc3b626b63 238 SUPERFAMILY SSF53335 62 188 7.61E-13 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_2738 3d0afbbb4ab1fcf1304d7f66ecca4b93 211 Gene3D G3DSA:1.20.1640.10 6 210 3.0E-10 T 11-10-2018 TF3313_2738 3d0afbbb4ab1fcf1304d7f66ecca4b93 211 SUPERFAMILY SSF82866 19 199 5.1E-33 T 11-10-2018 TF3313_2738 3d0afbbb4ab1fcf1304d7f66ecca4b93 211 Pfam PF02355 Protein export membrane protein 11 195 7.9E-52 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial TF3313_2738 3d0afbbb4ab1fcf1304d7f66ecca4b93 211 PRINTS PR01755 Bacterial translocase SecF protein signature 102 120 2.7E-13 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TF3313_2738 3d0afbbb4ab1fcf1304d7f66ecca4b93 211 PRINTS PR01755 Bacterial translocase SecF protein signature 134 149 2.7E-13 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TF3313_0103 bedcaa3db50393eb3ea4e290edf55c6f 210 Gene3D G3DSA:3.20.10.10 76 182 3.6E-25 T 11-10-2018 TF3313_0103 bedcaa3db50393eb3ea4e290edf55c6f 210 Pfam PF01063 Amino-transferase class IV 4 184 1.8E-17 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 TF3313_0103 bedcaa3db50393eb3ea4e290edf55c6f 210 SUPERFAMILY SSF56752 3 184 4.97E-28 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 TF3313_0103 bedcaa3db50393eb3ea4e290edf55c6f 210 Gene3D G3DSA:3.30.470.10 1 75 9.9E-7 T 11-10-2018 TF3313_0303 656c8fd1bc8b12bde891f38c1ce99037 267 Gene3D G3DSA:2.60.40.10 164 264 9.8E-12 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_0303 656c8fd1bc8b12bde891f38c1ce99037 267 Pfam PF07610 Protein of unknown function (DUF1573) 168 264 1.1E-25 T 11-10-2018 IPR011467 Protein of unknown function DUF1573 TF3313_2022 dc8e88d3b6a3c48306f629670e43fbdd 311 PIRSF PIRSF033579 30 298 3.8E-74 T 11-10-2018 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 TF3313_2022 dc8e88d3b6a3c48306f629670e43fbdd 311 Gene3D G3DSA:3.40.50.1400 150 266 3.2E-76 T 11-10-2018 TF3313_2022 dc8e88d3b6a3c48306f629670e43fbdd 311 Gene3D G3DSA:3.40.50.1400 41 283 3.2E-76 T 11-10-2018 TF3313_2022 dc8e88d3b6a3c48306f629670e43fbdd 311 SUPERFAMILY SSF53800 39 283 9.48E-63 T 11-10-2018 TF3313_2022 dc8e88d3b6a3c48306f629670e43fbdd 311 Pfam PF06180 Cobalt chelatase (CbiK) 41 283 5.2E-71 T 11-10-2018 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 TF3313_0862 0a20821dd92cd55c4a71646fc673ef70 140 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 13 136 2.2E-34 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 TF3313_0862 0a20821dd92cd55c4a71646fc673ef70 140 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 135 6.9E-32 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 TF3313_0862 0a20821dd92cd55c4a71646fc673ef70 140 SUPERFAMILY SSF52540 29 132 2.68E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0862 0a20821dd92cd55c4a71646fc673ef70 140 Gene3D G3DSA:3.40.50.300 2 140 1.8E-38 T 11-10-2018 TF3313_1284 21ed854bd0afd5ba3069293e40d81b13 343 SUPERFAMILY SSF51445 77 334 1.62E-14 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily TF3313_1284 21ed854bd0afd5ba3069293e40d81b13 343 Gene3D G3DSA:3.20.20.80 70 338 7.3E-20 T 11-10-2018 TF3313_0315 c3cfab88580ab9bc33fc4aa938bca00a 330 Pfam PF00535 Glycosyl transferase family 2 4 168 5.2E-28 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TF3313_0315 c3cfab88580ab9bc33fc4aa938bca00a 330 SUPERFAMILY SSF53448 1 257 1.04E-50 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_0315 c3cfab88580ab9bc33fc4aa938bca00a 330 Gene3D G3DSA:3.90.550.10 2 212 1.2E-48 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_2735 4c940c4e6795e92b7cd6a6a40edeaf34 413 Gene3D G3DSA:3.40.1710.10 56 139 1.5E-5 T 11-10-2018 TF3313_2735 4c940c4e6795e92b7cd6a6a40edeaf34 413 Pfam PF12698 ABC-2 family transporter protein 36 387 1.2E-42 T 11-10-2018 TF3313_1805 afbb27e5f10695a0eaa90571847e513d 386 Pfam PF06250 Protein of unknown function (DUF1016) 14 370 2.8E-83 T 11-10-2018 IPR009362 Protein of unknown function DUF1016 TF3313_1805 afbb27e5f10695a0eaa90571847e513d 386 Gene3D G3DSA:3.40.1350.10 231 359 6.3E-7 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 TF3313_1817 c73bb64ddd93321691139279fb6ce4b1 281 Gene3D G3DSA:2.40.10.10 123 198 2.2E-9 T 11-10-2018 TF3313_1817 c73bb64ddd93321691139279fb6ce4b1 281 Gene3D G3DSA:2.40.10.10 21 122 2.2E-9 T 11-10-2018 TF3313_1817 c73bb64ddd93321691139279fb6ce4b1 281 SUPERFAMILY SSF50494 6 229 8.09E-15 T 11-10-2018 IPR009003 Peptidase S1, PA clan TF3313_1817 c73bb64ddd93321691139279fb6ce4b1 281 Pfam PF13365 Trypsin-like peptidase domain 28 199 1.4E-8 T 11-10-2018 TF3313_2582 a6628c416a4ad637e5039482774a8f9b 178 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 3 177 9.6E-52 T 11-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG TF3313_2582 a6628c416a4ad637e5039482774a8f9b 178 Gene3D G3DSA:3.40.50.450 1 178 2.4E-65 T 11-10-2018 TF3313_2582 a6628c416a4ad637e5039482774a8f9b 178 Pfam PF03641 Possible lysine decarboxylase 46 175 1.0E-39 T 11-10-2018 IPR031100 LOG family TF3313_2582 a6628c416a4ad637e5039482774a8f9b 178 SUPERFAMILY SSF102405 1 177 1.39E-56 T 11-10-2018 TF3313_0328 566ec59bf92c6aeba71e7274aa8326c4 1062 PRINTS PR00702 Acriflavin resistance protein family signature 459 482 3.4E-7 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_0328 566ec59bf92c6aeba71e7274aa8326c4 1062 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 3.4E-7 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_0328 566ec59bf92c6aeba71e7274aa8326c4 1062 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 3.4E-7 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_0328 566ec59bf92c6aeba71e7274aa8326c4 1062 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 3.4E-7 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_0328 566ec59bf92c6aeba71e7274aa8326c4 1062 Gene3D G3DSA:3.30.2090.10 750 838 3.2E-54 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TF3313_0328 566ec59bf92c6aeba71e7274aa8326c4 1062 Gene3D G3DSA:1.20.1640.10 15 502 1.9E-87 T 11-10-2018 TF3313_0328 566ec59bf92c6aeba71e7274aa8326c4 1062 SUPERFAMILY SSF82866 836 1055 1.19E-30 T 11-10-2018 TF3313_0328 566ec59bf92c6aeba71e7274aa8326c4 1062 SUPERFAMILY SSF82714 187 273 3.53E-8 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TF3313_0328 566ec59bf92c6aeba71e7274aa8326c4 1062 Gene3D G3DSA:1.20.1640.10 503 545 1.9E-87 T 11-10-2018 TF3313_0328 566ec59bf92c6aeba71e7274aa8326c4 1062 Gene3D G3DSA:3.30.2090.10 182 278 1.9E-87 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TF3313_0328 566ec59bf92c6aeba71e7274aa8326c4 1062 SUPERFAMILY SSF82693 44 136 2.44E-15 T 11-10-2018 TF3313_0328 566ec59bf92c6aeba71e7274aa8326c4 1062 Gene3D G3DSA:3.30.70.1430 42 135 1.9E-87 T 11-10-2018 TF3313_0328 566ec59bf92c6aeba71e7274aa8326c4 1062 Pfam PF00873 AcrB/AcrD/AcrF family 15 545 1.1E-62 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_0328 566ec59bf92c6aeba71e7274aa8326c4 1062 Pfam PF00873 AcrB/AcrD/AcrF family 550 1051 4.3E-31 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TF3313_0328 566ec59bf92c6aeba71e7274aa8326c4 1062 Gene3D G3DSA:1.20.1640.10 557 1053 3.2E-54 T 11-10-2018 TF3313_0328 566ec59bf92c6aeba71e7274aa8326c4 1062 Gene3D G3DSA:3.30.70.1430 601 693 3.2E-54 T 11-10-2018 TF3313_0328 566ec59bf92c6aeba71e7274aa8326c4 1062 Gene3D G3DSA:3.30.70.1440 694 896 3.2E-54 T 11-10-2018 TF3313_0328 566ec59bf92c6aeba71e7274aa8326c4 1062 SUPERFAMILY SSF82866 301 482 2.35E-27 T 11-10-2018 TF3313_0328 566ec59bf92c6aeba71e7274aa8326c4 1062 Gene3D G3DSA:3.30.70.1320 136 335 1.9E-87 T 11-10-2018 TF3313_0328 566ec59bf92c6aeba71e7274aa8326c4 1062 SUPERFAMILY SSF82693 154 333 1.05E-12 T 11-10-2018 TF3313_2519 18ed6f9afb56833f71ae4cabf7a91605 375 SUPERFAMILY SSF52402 83 244 2.6E-25 T 11-10-2018 TF3313_2519 18ed6f9afb56833f71ae4cabf7a91605 375 SUPERFAMILY SSF52402 249 374 1.17E-12 T 11-10-2018 TF3313_2519 18ed6f9afb56833f71ae4cabf7a91605 375 PRINTS PR01438 Universal stress protein signature 82 100 1.8E-12 T 11-10-2018 IPR006015 Universal stress protein A TF3313_2519 18ed6f9afb56833f71ae4cabf7a91605 375 PRINTS PR01438 Universal stress protein signature 197 209 1.8E-12 T 11-10-2018 IPR006015 Universal stress protein A TF3313_2519 18ed6f9afb56833f71ae4cabf7a91605 375 PRINTS PR01438 Universal stress protein signature 215 237 1.8E-12 T 11-10-2018 IPR006015 Universal stress protein A TF3313_2519 18ed6f9afb56833f71ae4cabf7a91605 375 Gene3D G3DSA:3.40.50.620 80 244 3.1E-33 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_2519 18ed6f9afb56833f71ae4cabf7a91605 375 Gene3D G3DSA:3.40.50.620 253 375 6.0E-8 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_2519 18ed6f9afb56833f71ae4cabf7a91605 375 Pfam PF00582 Universal stress protein family 83 237 4.8E-17 T 11-10-2018 IPR006016 UspA TF3313_2519 18ed6f9afb56833f71ae4cabf7a91605 375 Pfam PF09413 Putative prokaryotic signal transducing protein 15 65 2.6E-8 T 11-10-2018 IPR018551 Domain of unknown function DUF2007 TF3313_2804 f2038cad076a8c2d90ea591950fe99c7 75 Pfam PF12728 Helix-turn-helix domain 26 71 1.3E-8 T 11-10-2018 TF3313_2804 f2038cad076a8c2d90ea591950fe99c7 75 SUPERFAMILY SSF46955 26 71 1.76E-5 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily TF3313_2346 2e3347a716edbbbd43a6dca955c24279 312 SUPERFAMILY SSF51905 1 309 2.85E-49 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TF3313_2346 2e3347a716edbbbd43a6dca955c24279 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 6.4E-69 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TF3313_2346 2e3347a716edbbbd43a6dca955c24279 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 6.4E-69 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TF3313_2346 2e3347a716edbbbd43a6dca955c24279 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 272 290 6.4E-69 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TF3313_2346 2e3347a716edbbbd43a6dca955c24279 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 6.4E-69 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TF3313_2346 2e3347a716edbbbd43a6dca955c24279 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 40 55 6.4E-69 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TF3313_2346 2e3347a716edbbbd43a6dca955c24279 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 196 212 6.4E-69 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TF3313_2346 2e3347a716edbbbd43a6dca955c24279 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 6.4E-69 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TF3313_2346 2e3347a716edbbbd43a6dca955c24279 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 237 258 6.4E-69 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TF3313_2346 2e3347a716edbbbd43a6dca955c24279 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 6.4E-69 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TF3313_2346 2e3347a716edbbbd43a6dca955c24279 312 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 7.9E-39 T 11-10-2018 TF3313_2346 2e3347a716edbbbd43a6dca955c24279 312 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 7.9E-39 T 11-10-2018 TF3313_2346 2e3347a716edbbbd43a6dca955c24279 312 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 7.9E-39 T 11-10-2018 TF3313_2346 2e3347a716edbbbd43a6dca955c24279 312 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 7.9E-39 T 11-10-2018 TF3313_2346 2e3347a716edbbbd43a6dca955c24279 312 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 7.9E-39 T 11-10-2018 TF3313_2346 2e3347a716edbbbd43a6dca955c24279 312 Gene3D G3DSA:3.50.50.60 123 248 6.2E-108 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TF3313_2346 2e3347a716edbbbd43a6dca955c24279 312 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 298 2.6E-44 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TF3313_2346 2e3347a716edbbbd43a6dca955c24279 312 Gene3D G3DSA:3.50.50.60 9 308 6.2E-108 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TF3313_2346 2e3347a716edbbbd43a6dca955c24279 312 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 TF3313_2346 2e3347a716edbbbd43a6dca955c24279 312 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 7 309 2.5E-109 T 11-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 TF3313_1950 5d6447e905a09ff6f2d7bb69c5deeb46 389 SUPERFAMILY SSF53448 4 260 8.63E-50 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_1950 5d6447e905a09ff6f2d7bb69c5deeb46 389 Pfam PF00535 Glycosyl transferase family 2 7 191 6.3E-21 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TF3313_1950 5d6447e905a09ff6f2d7bb69c5deeb46 389 Gene3D G3DSA:3.90.550.10 1 242 8.3E-49 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_0290 df1e831e410d55d518e6760cf0368291 119 Pfam PF03965 Penicillinase repressor 4 116 9.0E-23 T 11-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 TF3313_0290 df1e831e410d55d518e6760cf0368291 119 SUPERFAMILY SSF46785 1 118 5.99E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TF3313_0290 df1e831e410d55d518e6760cf0368291 119 Gene3D G3DSA:1.10.10.10 1 76 4.6E-10 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_0290 df1e831e410d55d518e6760cf0368291 119 PIRSF PIRSF019455 1 119 3.2E-21 T 11-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 TF3313_0070 bb9381daab0ef5c1fa17829a5c0c4e17 527 Pfam PF03572 Peptidase family S41 299 453 2.2E-10 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 TF3313_0070 bb9381daab0ef5c1fa17829a5c0c4e17 527 SUPERFAMILY SSF52096 90 515 6.13E-17 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TF3313_0070 bb9381daab0ef5c1fa17829a5c0c4e17 527 Gene3D G3DSA:3.30.750.44 25 125 2.8E-5 T 11-10-2018 TF3313_2413 83c8e2b30c5ab1e7e6a469a2676d53fe 207 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 13 189 7.2E-46 T 11-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 TF3313_2413 83c8e2b30c5ab1e7e6a469a2676d53fe 207 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 5 191 21.982 T 11-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 TF3313_2413 83c8e2b30c5ab1e7e6a469a2676d53fe 207 PIRSF PIRSF006091 1 203 9.4E-42 T 11-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 TF3313_2413 83c8e2b30c5ab1e7e6a469a2676d53fe 207 SMART SM00900 98 189 3.7E-24 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 TF3313_2413 83c8e2b30c5ab1e7e6a469a2676d53fe 207 Pfam PF04205 FMN-binding domain 98 186 2.2E-22 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 TF3313_2753 79cc039fc4d8910fe9dc90e66d8d1035 243 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 199 212 2.3E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TF3313_2753 79cc039fc4d8910fe9dc90e66d8d1035 243 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 153 169 2.3E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TF3313_2753 79cc039fc4d8910fe9dc90e66d8d1035 243 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 2.3E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TF3313_2753 79cc039fc4d8910fe9dc90e66d8d1035 243 Pfam PF13419 Haloacid dehalogenase-like hydrolase 120 209 1.3E-9 T 11-10-2018 TF3313_2753 79cc039fc4d8910fe9dc90e66d8d1035 243 Gene3D G3DSA:3.40.50.1000 111 240 5.1E-28 T 11-10-2018 IPR023214 HAD superfamily TF3313_2753 79cc039fc4d8910fe9dc90e66d8d1035 243 SUPERFAMILY SSF56784 7 238 3.34E-32 T 11-10-2018 IPR036412 HAD-like superfamily TF3313_2753 79cc039fc4d8910fe9dc90e66d8d1035 243 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 116 204 2.7E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TF3313_2209 48bc11cf072ceeda516d041a9f1b470f 554 PIRSF PIRSF003128 1 554 2.7E-178 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 TF3313_2209 48bc11cf072ceeda516d041a9f1b470f 554 Gene3D G3DSA:3.40.50.300 273 552 6.7E-48 T 11-10-2018 TF3313_2209 48bc11cf072ceeda516d041a9f1b470f 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 551 3.3E-141 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 TF3313_2209 48bc11cf072ceeda516d041a9f1b470f 554 SUPERFAMILY SSF52540 1 217 4.48E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2209 48bc11cf072ceeda516d041a9f1b470f 554 Gene3D G3DSA:3.40.50.300 1 228 1.5E-40 T 11-10-2018 TF3313_2209 48bc11cf072ceeda516d041a9f1b470f 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 509 1.4E-17 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal TF3313_2209 48bc11cf072ceeda516d041a9f1b470f 554 SUPERFAMILY SSF52540 3 505 1.5E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1962 e182e633bb7a483f5f5fbfb1885d02ec 209 PIRSF PIRSF006102 3 209 9.3E-65 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 TF3313_1962 e182e633bb7a483f5f5fbfb1885d02ec 209 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 5 207 3.9E-94 T 11-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 TF3313_1962 e182e633bb7a483f5f5fbfb1885d02ec 209 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 194 4.3E-58 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 TF3313_1962 e182e633bb7a483f5f5fbfb1885d02ec 209 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 34.649 T 11-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 TF3313_1291 d29a4d6b04d85e4b2f08ed61a6abc1aa 517 SUPERFAMILY SSF48452 20 505 1.11E-85 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1291 d29a4d6b04d85e4b2f08ed61a6abc1aa 517 Gene3D G3DSA:1.25.40.390 38 505 5.4E-99 T 11-10-2018 TF3313_1291 d29a4d6b04d85e4b2f08ed61a6abc1aa 517 Pfam PF12771 Starch-binding associating with outer membrane 1 436 1.6E-39 T 11-10-2018 TF3313_2787 0a18049a61bb731a783f5561443aaa7c 107 Pfam PF01548 Transposase 20 100 8.9E-10 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 TF3313_2525 9a18e758821a23f6984d21d8961de2e3 339 SUPERFAMILY SSF53300 86 288 6.12E-32 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TF3313_2525 9a18e758821a23f6984d21d8961de2e3 339 Pfam PF07584 Aerotolerance regulator N-terminal 1 73 1.2E-5 T 11-10-2018 IPR024163 Aerotolerance regulator, N-terminal TF3313_2525 9a18e758821a23f6984d21d8961de2e3 339 Pfam PF00092 von Willebrand factor type A domain 92 277 2.6E-24 T 11-10-2018 IPR002035 von Willebrand factor, type A TF3313_2525 9a18e758821a23f6984d21d8961de2e3 339 Gene3D G3DSA:3.40.50.410 83 296 4.9E-63 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TF3313_2525 9a18e758821a23f6984d21d8961de2e3 339 SMART SM00327 89 288 1.8E-17 T 11-10-2018 IPR002035 von Willebrand factor, type A TF3313_0348 6622812d45a75404c1e518a3a58a438b 275 SUPERFAMILY SSF69593 65 270 9.81E-7 T 11-10-2018 TF3313_0348 6622812d45a75404c1e518a3a58a438b 275 Pfam PF01553 Acyltransferase 69 196 1.8E-9 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TF3313_0348 6622812d45a75404c1e518a3a58a438b 275 SMART SM00563 84 201 1.3E-5 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TF3313_2744 fd6baf0e492dc6dec259619dca3ea5c9 487 Pfam PF15975 Flotillin 334 449 1.8E-8 T 11-10-2018 IPR031905 Flotillin, C-terminal domain Reactome: R-HSA-8849932 TF3313_2744 fd6baf0e492dc6dec259619dca3ea5c9 487 SUPERFAMILY SSF117892 62 201 1.44E-32 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily TF3313_2744 fd6baf0e492dc6dec259619dca3ea5c9 487 Gene3D G3DSA:3.30.479.30 71 187 1.6E-30 T 11-10-2018 TF3313_2744 fd6baf0e492dc6dec259619dca3ea5c9 487 SMART SM00244 23 197 0.002 T 11-10-2018 IPR001107 Band 7 domain TF3313_2744 fd6baf0e492dc6dec259619dca3ea5c9 487 Pfam PF01145 SPFH domain / Band 7 family 29 213 1.6E-22 T 11-10-2018 IPR001107 Band 7 domain TF3313_2797 648074f67fb6d0a533f02576cc16a6fe 244 Gene3D G3DSA:2.50.20.10 19 244 2.8E-53 T 11-10-2018 TF3313_2797 648074f67fb6d0a533f02576cc16a6fe 244 Pfam PF17131 Outer membrane lipoprotein-sorting protein 67 243 1.5E-47 T 11-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein TF3313_2247 e7a4079b05d5d74f509d80c930df573e 260 Gene3D G3DSA:3.90.550.10 8 240 3.7E-39 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_2247 e7a4079b05d5d74f509d80c930df573e 260 Pfam PF00535 Glycosyl transferase family 2 19 155 2.7E-25 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TF3313_2247 e7a4079b05d5d74f509d80c930df573e 260 SUPERFAMILY SSF53448 16 250 1.04E-39 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_1015 b0aecd328ba1f10e16726f059d0e58d2 253 SUPERFAMILY SSF56112 37 189 4.65E-12 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily TF3313_1015 b0aecd328ba1f10e16726f059d0e58d2 253 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 73 201 1.8E-9 T 11-10-2018 TF3313_1015 b0aecd328ba1f10e16726f059d0e58d2 253 Gene3D G3DSA:1.10.510.10 124 217 2.0E-8 T 11-10-2018 TF3313_2235 0a427b01ec1d45bc6c1f6935394010ae 669 SUPERFAMILY SSF48452 23 667 2.02E-101 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2235 0a427b01ec1d45bc6c1f6935394010ae 669 Pfam PF07980 SusD family 322 667 6.3E-56 T 11-10-2018 IPR012944 RagB/SusD domain TF3313_2235 0a427b01ec1d45bc6c1f6935394010ae 669 Gene3D G3DSA:1.25.40.390 40 667 5.2E-113 T 11-10-2018 TF3313_2235 0a427b01ec1d45bc6c1f6935394010ae 669 Pfam PF14322 Starch-binding associating with outer membrane 101 221 1.5E-23 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_1391 bccfef98edd134cdbef6df45ce3aa7c1 249 Gene3D G3DSA:3.90.550.10 1 246 1.8E-52 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_1391 bccfef98edd134cdbef6df45ce3aa7c1 249 SUPERFAMILY SSF53448 1 245 1.17E-48 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_1391 bccfef98edd134cdbef6df45ce3aa7c1 249 Pfam PF00483 Nucleotidyl transferase 2 141 1.9E-17 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 TF3313_1175 8c8b271e694344dba6d224db835a33e7 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 7.3E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1175 8c8b271e694344dba6d224db835a33e7 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 7.3E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1175 8c8b271e694344dba6d224db835a33e7 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 7.3E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1175 8c8b271e694344dba6d224db835a33e7 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 7.3E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1175 8c8b271e694344dba6d224db835a33e7 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 7.3E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1175 8c8b271e694344dba6d224db835a33e7 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 7.3E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1175 8c8b271e694344dba6d224db835a33e7 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 184 7.4E-4 T 11-10-2018 TF3313_1175 8c8b271e694344dba6d224db835a33e7 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.3E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1175 8c8b271e694344dba6d224db835a33e7 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.3E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1175 8c8b271e694344dba6d224db835a33e7 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.3E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TF3313_1175 8c8b271e694344dba6d224db835a33e7 241 Gene3D G3DSA:3.40.50.720 1 241 5.7E-79 T 11-10-2018 TF3313_1175 8c8b271e694344dba6d224db835a33e7 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 240 2.6E-60 T 11-10-2018 TF3313_1175 8c8b271e694344dba6d224db835a33e7 241 SUPERFAMILY SSF51735 2 240 2.4E-77 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_2377 a2150be60e0f0c39759e6aa1f4973b50 227 PIRSF PIRSF016262 1 223 2.8E-57 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 TF3313_2377 a2150be60e0f0c39759e6aa1f4973b50 227 SUPERFAMILY SSF55681 5 222 9.11E-56 T 11-10-2018 TF3313_2377 a2150be60e0f0c39759e6aa1f4973b50 227 Pfam PF03099 Biotin/lipoate A/B protein ligase family 65 176 4.5E-6 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 TF3313_2377 a2150be60e0f0c39759e6aa1f4973b50 227 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 87 140 3.0E-16 T 11-10-2018 TF3313_2377 a2150be60e0f0c39759e6aa1f4973b50 227 Gene3D G3DSA:3.30.930.10 5 222 5.3E-69 T 11-10-2018 TF3313_2377 a2150be60e0f0c39759e6aa1f4973b50 227 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 83 98 - T 11-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 TF3313_2377 a2150be60e0f0c39759e6aa1f4973b50 227 Hamap MF_00013 Octanoyltransferase [lipB]. 5 224 31.566 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 TF3313_2377 a2150be60e0f0c39759e6aa1f4973b50 227 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 40 200 1.1E-43 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 TF3313_2124 4b63bbc700dd39fd95581a83b0c5ca6c 344 SUPERFAMILY SSF55909 3 336 1.09E-114 T 11-10-2018 TF3313_2124 4b63bbc700dd39fd95581a83b0c5ca6c 344 Gene3D G3DSA:3.75.10.10 1 343 6.0E-126 T 11-10-2018 TF3313_2124 4b63bbc700dd39fd95581a83b0c5ca6c 344 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 6 336 3.8E-113 T 11-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 TF3313_2032 cfbf496613ebe6142649cb2e559ccd09 674 Pfam PF07698 7TM receptor with intracellular HD hydrolase 255 441 9.3E-36 T 11-10-2018 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain TF3313_2032 cfbf496613ebe6142649cb2e559ccd09 674 Pfam PF07697 7TM-HD extracellular 47 240 6.6E-15 T 11-10-2018 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain TF3313_2032 cfbf496613ebe6142649cb2e559ccd09 674 SMART SM00471 462 619 5.2E-10 T 11-10-2018 IPR003607 HD/PDEase domain TF3313_2032 cfbf496613ebe6142649cb2e559ccd09 674 Gene3D G3DSA:1.10.3210.10 453 652 1.5E-21 T 11-10-2018 TF3313_2032 cfbf496613ebe6142649cb2e559ccd09 674 Pfam PF01966 HD domain 466 609 5.7E-19 T 11-10-2018 IPR006674 HD domain TF3313_2032 cfbf496613ebe6142649cb2e559ccd09 674 SUPERFAMILY SSF109604 449 666 1.21E-22 T 11-10-2018 TF3313_2032 cfbf496613ebe6142649cb2e559ccd09 674 TIGRFAM TIGR00277 HDIG: HDIG domain 464 561 4.7E-24 T 11-10-2018 IPR006675 HDIG domain TF3313_2351 998531a8524d99b8ea3d744195a7871a 329 Pfam PF02591 C4-type zinc ribbon domain 286 318 3.0E-11 T 11-10-2018 IPR003743 C4-type zinc ribbon domain TF3313_0590 60e1a0bbd07f678ce69266c67fa9ebaa 487 Pfam PF05133 Phage portal protein, SPP1 Gp6-like 84 476 4.1E-44 T 11-10-2018 IPR021145 Portal protein TF3313_1713 49b6dbc0dbb681eaca8113698c249a8e 146 SUPERFAMILY SSF53927 4 146 1.39E-46 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 TF3313_1713 49b6dbc0dbb681eaca8113698c249a8e 146 Gene3D G3DSA:3.40.140.10 1 146 5.5E-54 T 11-10-2018 TF3313_1713 49b6dbc0dbb681eaca8113698c249a8e 146 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 10 146 41.803 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 TF3313_1713 49b6dbc0dbb681eaca8113698c249a8e 146 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 92 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 TF3313_1713 49b6dbc0dbb681eaca8113698c249a8e 146 Pfam PF14437 MafB19-like deaminase 8 146 1.9E-29 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 TF3313_0305 0b7b610e62c28650155499872eb31651 297 Gene3D G3DSA:2.10.109.10 33 167 9.3E-22 T 11-10-2018 TF3313_0305 0b7b610e62c28650155499872eb31651 297 Gene3D G3DSA:2.10.109.10 183 295 1.0E-12 T 11-10-2018 TF3313_0305 0b7b610e62c28650155499872eb31651 297 Pfam PF00717 Peptidase S24-like 43 133 1.1E-11 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C TF3313_0305 0b7b610e62c28650155499872eb31651 297 SUPERFAMILY SSF51306 35 295 1.29E-44 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily TF3313_0305 0b7b610e62c28650155499872eb31651 297 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 37 53 1.8E-13 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TF3313_0305 0b7b610e62c28650155499872eb31651 297 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 120 132 1.8E-13 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TF3313_0305 0b7b610e62c28650155499872eb31651 297 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 240 259 1.8E-13 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TF3313_0305 0b7b610e62c28650155499872eb31651 297 Pfam PF10502 Signal peptidase, peptidase S26 238 277 5.9E-5 T 11-10-2018 IPR019533 Peptidase S26 TF3313_0305 0b7b610e62c28650155499872eb31651 297 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 24 171 3.5E-21 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TF3313_0731 530ff30645223589a5bb20a123248d2a 120 SUPERFAMILY SSF46955 13 116 1.92E-21 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily TF3313_0731 530ff30645223589a5bb20a123248d2a 120 Gene3D G3DSA:1.10.1660.10 2 120 7.3E-25 T 11-10-2018 TF3313_0731 530ff30645223589a5bb20a123248d2a 120 SMART SM00422 13 83 1.6E-10 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TF3313_0731 530ff30645223589a5bb20a123248d2a 120 Pfam PF13411 MerR HTH family regulatory protein 13 82 1.3E-24 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TF3313_0992 0106361db8338337c6800e7b15ca8e7c 327 SUPERFAMILY SSF55347 119 267 2.81E-10 T 11-10-2018 TF3313_0992 0106361db8338337c6800e7b15ca8e7c 327 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 90 9.7E-10 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 TF3313_0992 0106361db8338337c6800e7b15ca8e7c 327 SUPERFAMILY SSF51735 1 148 8.45E-22 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_0992 0106361db8338337c6800e7b15ca8e7c 327 Gene3D G3DSA:3.40.50.720 1 120 1.6E-13 T 11-10-2018 TF3313_0992 0106361db8338337c6800e7b15ca8e7c 327 Gene3D G3DSA:3.30.360.10 121 325 1.6E-16 T 11-10-2018 TF3313_1569 271f957608e2936c51f59b46750f8597 392 Pfam PF04773 FecR protein 167 261 7.0E-21 T 11-10-2018 IPR006860 FecR protein TF3313_1569 271f957608e2936c51f59b46750f8597 392 Gene3D G3DSA:2.60.120.1440 153 301 3.6E-44 T 11-10-2018 TF3313_1569 271f957608e2936c51f59b46750f8597 392 Gene3D G3DSA:3.55.50.30 303 378 7.0E-13 T 11-10-2018 TF3313_1569 271f957608e2936c51f59b46750f8597 392 Pfam PF16344 Domain of unknown function (DUF4974) 275 369 1.7E-21 T 11-10-2018 IPR032508 Protein FecR, C-terminal TF3313_0017 1ff068ad6ca5ed3b9c8d8dfab70a27df 337 SUPERFAMILY SSF52540 4 233 3.2E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0017 1ff068ad6ca5ed3b9c8d8dfab70a27df 337 Gene3D G3DSA:3.40.50.300 1 253 3.0E-56 T 11-10-2018 TF3313_0017 1ff068ad6ca5ed3b9c8d8dfab70a27df 337 Pfam PF00005 ABC transporter 27 174 1.8E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TF3313_0017 1ff068ad6ca5ed3b9c8d8dfab70a27df 337 SMART SM00382 34 223 4.8E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_0823 62455b93bc168ea759ed4089d9482c20 329 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 266 324 9.2E-8 T 11-10-2018 IPR026444 Secretion system C-terminal sorting domain TF3313_2772 79d87fcf67b85ea940189d4600418c74 662 SUPERFAMILY SSF100950 37 314 2.45E-70 T 11-10-2018 IPR037171 NagB/RpiA transferase-like TF3313_2772 79d87fcf67b85ea940189d4600418c74 662 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 45 266 3.3E-23 T 11-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 TF3313_2772 79d87fcf67b85ea940189d4600418c74 662 Gene3D G3DSA:3.40.50.1360 34 293 2.3E-72 T 11-10-2018 TF3313_2772 79d87fcf67b85ea940189d4600418c74 662 SUPERFAMILY SSF102588 376 651 1.44E-42 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 TF3313_2772 79d87fcf67b85ea940189d4600418c74 662 Pfam PF02585 GlcNAc-PI de-N-acetylase 381 558 3.4E-18 T 11-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 TF3313_2212 5603f977ebf064042ed22e2d621f21e8 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.697 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TF3313_2212 5603f977ebf064042ed22e2d621f21e8 65 Gene3D G3DSA:2.40.50.530 1 63 4.0E-22 T 11-10-2018 TF3313_2212 5603f977ebf064042ed22e2d621f21e8 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 11-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_2212 5603f977ebf064042ed22e2d621f21e8 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 9.0E-19 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TF3313_2212 5603f977ebf064042ed22e2d621f21e8 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 9.0E-19 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TF3313_2212 5603f977ebf064042ed22e2d621f21e8 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 9.0E-19 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TF3313_2212 5603f977ebf064042ed22e2d621f21e8 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 5.5E-28 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TF3313_2212 5603f977ebf064042ed22e2d621f21e8 65 Pfam PF01632 Ribosomal protein L35 2 62 2.1E-26 T 11-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2212 5603f977ebf064042ed22e2d621f21e8 65 SUPERFAMILY SSF143034 2 63 1.83E-23 T 11-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1852 8a4aa7d19f9230c5a5002b7087d85638 1144 Gene3D G3DSA:2.170.130.10 218 347 2.5E-23 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_1852 8a4aa7d19f9230c5a5002b7087d85638 1144 SUPERFAMILY SSF56935 225 1110 3.05E-74 T 11-10-2018 TF3313_1852 8a4aa7d19f9230c5a5002b7087d85638 1144 SUPERFAMILY SSF49464 148 227 7.72E-18 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_1852 8a4aa7d19f9230c5a5002b7087d85638 1144 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 148 1144 3.3E-272 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_1852 8a4aa7d19f9230c5a5002b7087d85638 1144 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 319 348 4.6E-16 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_1852 8a4aa7d19f9230c5a5002b7087d85638 1144 Pfam PF07715 TonB-dependent Receptor Plug Domain 237 342 4.6E-15 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_1852 8a4aa7d19f9230c5a5002b7087d85638 1144 Gene3D G3DSA:2.60.40.1120 146 217 1.1E-6 T 11-10-2018 TF3313_1852 8a4aa7d19f9230c5a5002b7087d85638 1144 Pfam PF00593 TonB dependent receptor 600 1142 1.1E-32 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_1852 8a4aa7d19f9230c5a5002b7087d85638 1144 Pfam PF13715 CarboxypepD_reg-like domain 148 229 2.4E-16 T 11-10-2018 TF3313_1076 bbf1a5ca1aa5865664064045533177be 129 Gene3D G3DSA:3.40.250.10 16 124 1.7E-29 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TF3313_1076 bbf1a5ca1aa5865664064045533177be 129 Pfam PF00581 Rhodanese-like domain 30 121 9.1E-19 T 11-10-2018 IPR001763 Rhodanese-like domain TF3313_1076 bbf1a5ca1aa5865664064045533177be 129 SUPERFAMILY SSF52821 15 122 2.49E-29 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TF3313_1076 bbf1a5ca1aa5865664064045533177be 129 SMART SM00450 29 126 1.2E-21 T 11-10-2018 IPR001763 Rhodanese-like domain TF3313_2478 a3abb5e464eaa61ecc807a62d71a0e35 180 Gene3D G3DSA:3.40.920.10 1 179 2.0E-49 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 TF3313_2478 a3abb5e464eaa61ecc807a62d71a0e35 180 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 11 175 2.8E-31 T 11-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 TF3313_2478 a3abb5e464eaa61ecc807a62d71a0e35 180 SUPERFAMILY SSF53323 1 180 7.72E-43 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 TF3313_2018 1146bcc9cf557cb619e211fc7cf41447 692 Gene3D G3DSA:3.40.50.1110 15 216 2.2E-25 T 11-10-2018 IPR036514 SGNH hydrolase superfamily TF3313_2018 1146bcc9cf557cb619e211fc7cf41447 692 SUPERFAMILY SSF52266 22 218 2.11E-30 T 11-10-2018 TF3313_2018 1146bcc9cf557cb619e211fc7cf41447 692 SUPERFAMILY SSF52266 301 644 2.75E-65 T 11-10-2018 TF3313_2018 1146bcc9cf557cb619e211fc7cf41447 692 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 302 583 6.4E-20 T 11-10-2018 IPR005181 Sialate O-acetylesterase domain TF3313_2018 1146bcc9cf557cb619e211fc7cf41447 692 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 28 203 4.7E-21 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain TF3313_2018 1146bcc9cf557cb619e211fc7cf41447 692 Gene3D G3DSA:2.60.40.10 223 291 1.4E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_0235 27e42974c1e5e690b89624b15e0eac7f 619 Pfam PF00415 Regulator of chromosome condensation (RCC1) repeat 203 247 3.9E-7 T 11-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 TF3313_0235 27e42974c1e5e690b89624b15e0eac7f 619 Pfam PF00415 Regulator of chromosome condensation (RCC1) repeat 454 499 1.9E-4 T 11-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 TF3313_0235 27e42974c1e5e690b89624b15e0eac7f 619 SUPERFAMILY SSF50985 181 231 6.28E-8 T 11-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II TF3313_0235 27e42974c1e5e690b89624b15e0eac7f 619 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 386 402 1.7E-10 T 11-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 TF3313_0235 27e42974c1e5e690b89624b15e0eac7f 619 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 253 269 1.7E-10 T 11-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 TF3313_0235 27e42974c1e5e690b89624b15e0eac7f 619 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 303 319 1.7E-10 T 11-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 TF3313_0235 27e42974c1e5e690b89624b15e0eac7f 619 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 492 510 1.7E-10 T 11-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 TF3313_0235 27e42974c1e5e690b89624b15e0eac7f 619 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 402 416 1.7E-10 T 11-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 TF3313_0235 27e42974c1e5e690b89624b15e0eac7f 619 ProSitePatterns PS00626 Regulator of chromosome condensation (RCC1) signature 2. 337 347 - T 11-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 TF3313_0235 27e42974c1e5e690b89624b15e0eac7f 619 Gene3D G3DSA:3.10.20.660 26 98 4.4E-15 T 11-10-2018 TF3313_0235 27e42974c1e5e690b89624b15e0eac7f 619 Gene3D G3DSA:3.10.20.660 100 179 9.9E-14 T 11-10-2018 TF3313_0235 27e42974c1e5e690b89624b15e0eac7f 619 Gene3D G3DSA:2.130.10.30 368 534 6.3E-31 T 11-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II TF3313_0235 27e42974c1e5e690b89624b15e0eac7f 619 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 60 97 1.2E-7 T 11-10-2018 IPR013378 Listeria/Bacterioides repeat TF3313_0235 27e42974c1e5e690b89624b15e0eac7f 619 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 137 178 1.6E-10 T 11-10-2018 IPR013378 Listeria/Bacterioides repeat TF3313_0235 27e42974c1e5e690b89624b15e0eac7f 619 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 384 412 5.7E-6 T 11-10-2018 TF3313_0235 27e42974c1e5e690b89624b15e0eac7f 619 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 284 313 1.1E-7 T 11-10-2018 TF3313_0235 27e42974c1e5e690b89624b15e0eac7f 619 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 334 362 2.5E-5 T 11-10-2018 TF3313_0235 27e42974c1e5e690b89624b15e0eac7f 619 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 105 175 7.7E-11 T 11-10-2018 IPR013378 Listeria/Bacterioides repeat TF3313_0235 27e42974c1e5e690b89624b15e0eac7f 619 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 29 92 2.0E-14 T 11-10-2018 IPR013378 Listeria/Bacterioides repeat TF3313_0235 27e42974c1e5e690b89624b15e0eac7f 619 SUPERFAMILY SSF50985 233 523 6.54E-61 T 11-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II TF3313_0235 27e42974c1e5e690b89624b15e0eac7f 619 Gene3D G3DSA:2.130.10.30 181 367 8.4E-43 T 11-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II TF3313_2900 8edaff7a1351a17c23378e93c5bb70b3 262 Pfam PF00795 Carbon-nitrogen hydrolase 8 242 3.2E-36 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 TF3313_2900 8edaff7a1351a17c23378e93c5bb70b3 262 SUPERFAMILY SSF56317 5 255 3.01E-64 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TF3313_2900 8edaff7a1351a17c23378e93c5bb70b3 262 Gene3D G3DSA:3.60.110.10 5 262 1.7E-83 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TF3313_0562 7d1f61fc073db25f9b058fb4f109969d 565 Pfam PF00176 SNF2 family N-terminal domain 123 351 2.2E-26 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 TF3313_0562 7d1f61fc073db25f9b058fb4f109969d 565 SMART SM00487 99 298 1.2E-15 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TF3313_0562 7d1f61fc073db25f9b058fb4f109969d 565 Gene3D G3DSA:3.40.50.10810 104 323 7.9E-31 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily TF3313_0562 7d1f61fc073db25f9b058fb4f109969d 565 SMART SM00490 420 503 4.8E-10 T 11-10-2018 IPR001650 Helicase, C-terminal TF3313_0562 7d1f61fc073db25f9b058fb4f109969d 565 SUPERFAMILY SSF52540 79 299 7.31E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0562 7d1f61fc073db25f9b058fb4f109969d 565 Pfam PF00271 Helicase conserved C-terminal domain 395 503 2.9E-14 T 11-10-2018 IPR001650 Helicase, C-terminal TF3313_0562 7d1f61fc073db25f9b058fb4f109969d 565 SUPERFAMILY SSF52540 325 546 2.13E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0562 7d1f61fc073db25f9b058fb4f109969d 565 Gene3D G3DSA:3.40.50.300 325 564 4.2E-41 T 11-10-2018 TF3313_1014 caabe62fdd982f5097f5986c64218a7d 919 Pfam PF01841 Transglutaminase-like superfamily 145 230 3.0E-15 T 11-10-2018 IPR002931 Transglutaminase-like TF3313_1014 caabe62fdd982f5097f5986c64218a7d 919 Pfam PF01841 Transglutaminase-like superfamily 559 634 3.5E-5 T 11-10-2018 IPR002931 Transglutaminase-like TF3313_1014 caabe62fdd982f5097f5986c64218a7d 919 SUPERFAMILY SSF54001 92 256 6.45E-27 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TF3313_1014 caabe62fdd982f5097f5986c64218a7d 919 Gene3D G3DSA:2.60.40.1120 290 371 4.4E-35 T 11-10-2018 TF3313_1014 caabe62fdd982f5097f5986c64218a7d 919 Gene3D G3DSA:3.10.620.30 96 243 1.5E-16 T 11-10-2018 TF3313_1014 caabe62fdd982f5097f5986c64218a7d 919 SMART SM00460 177 236 1.1E-8 T 11-10-2018 IPR002931 Transglutaminase-like TF3313_1312 d372969c377ecbe96a337361a11458f4 157 Pfam PF01928 CYTH domain 4 137 1.9E-6 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 TF3313_1312 d372969c377ecbe96a337361a11458f4 157 PIRSF PIRSF016487 1 157 8.6E-60 T 11-10-2018 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like TF3313_1312 d372969c377ecbe96a337361a11458f4 157 SUPERFAMILY SSF55154 1 149 3.92E-40 T 11-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 TF3313_1312 d372969c377ecbe96a337361a11458f4 157 Gene3D G3DSA:2.40.320.10 1 151 6.8E-46 T 11-10-2018 TF3313_1312 d372969c377ecbe96a337361a11458f4 157 SMART SM01118 2 149 5.6E-20 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 TF3313_2396 297f9bbd239e1a58c36c4cc58045811c 519 Pfam PF07980 SusD family 273 519 1.9E-29 T 11-10-2018 IPR012944 RagB/SusD domain TF3313_2396 297f9bbd239e1a58c36c4cc58045811c 519 Pfam PF14322 Starch-binding associating with outer membrane 41 224 3.1E-15 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_2396 297f9bbd239e1a58c36c4cc58045811c 519 Gene3D G3DSA:1.10.3780.10 295 388 7.0E-98 T 11-10-2018 TF3313_2396 297f9bbd239e1a58c36c4cc58045811c 519 SUPERFAMILY SSF48452 20 519 3.54E-102 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2396 297f9bbd239e1a58c36c4cc58045811c 519 Gene3D G3DSA:1.25.40.10 201 466 7.0E-98 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2396 297f9bbd239e1a58c36c4cc58045811c 519 Gene3D G3DSA:1.25.40.390 66 519 7.0E-98 T 11-10-2018 TF3313_0041 2e4344f187a732380db60b98c5696256 433 Pfam PF03092 BT1 family 27 126 6.8E-9 T 11-10-2018 IPR039309 Biopterin transporter family TF3313_0041 2e4344f187a732380db60b98c5696256 433 Gene3D G3DSA:1.20.1250.20 3 422 3.9E-24 T 11-10-2018 TF3313_0041 2e4344f187a732380db60b98c5696256 433 SUPERFAMILY SSF103473 10 423 7.19E-34 T 11-10-2018 IPR036259 MFS transporter superfamily TF3313_1949 9f379688d578b5b6130cb70ccaf9a915 207 Gene3D G3DSA:3.40.1360.10 80 200 4.1E-41 T 11-10-2018 TF3313_1949 9f379688d578b5b6130cb70ccaf9a915 207 Gene3D G3DSA:1.10.8.420 3 56 1.8E-15 T 11-10-2018 TF3313_1949 9f379688d578b5b6130cb70ccaf9a915 207 SMART SM00493 83 168 4.8E-5 T 11-10-2018 IPR006171 TOPRIM domain TF3313_1949 9f379688d578b5b6130cb70ccaf9a915 207 ProSitePatterns PS01300 RecR protein signature. 60 81 - T 11-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 TF3313_1949 9f379688d578b5b6130cb70ccaf9a915 207 Gene3D G3DSA:3.30.60.80 57 78 2.4E-5 T 11-10-2018 TF3313_1949 9f379688d578b5b6130cb70ccaf9a915 207 SUPERFAMILY SSF111304 8 201 3.4E-68 T 11-10-2018 IPR023627 Recombination protein RecR TF3313_1949 9f379688d578b5b6130cb70ccaf9a915 207 Pfam PF13662 Toprim domain 83 174 4.2E-22 T 11-10-2018 IPR006171 TOPRIM domain TF3313_1949 9f379688d578b5b6130cb70ccaf9a915 207 Pfam PF02132 RecR protein 44 81 7.0E-15 T 11-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger TF3313_1949 9f379688d578b5b6130cb70ccaf9a915 207 TIGRFAM TIGR00615 recR: recombination protein RecR 9 198 6.8E-69 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 TF3313_1949 9f379688d578b5b6130cb70ccaf9a915 207 Hamap MF_00017 Recombination protein RecR [recR]. 1 201 84.758 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 TF3313_1617 f555460edbbb98e819b56f54b10b48c1 239 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 5 238 15.293 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 TF3313_1617 f555460edbbb98e819b56f54b10b48c1 239 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 182 237 7.2E-8 T 11-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 TF3313_1617 f555460edbbb98e819b56f54b10b48c1 239 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 8 218 1.1E-60 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 TF3313_1617 f555460edbbb98e819b56f54b10b48c1 239 SUPERFAMILY SSF55120 7 228 2.62E-71 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TF3313_1617 f555460edbbb98e819b56f54b10b48c1 239 Gene3D G3DSA:3.30.2350.10 4 238 6.9E-80 T 11-10-2018 TF3313_1617 f555460edbbb98e819b56f54b10b48c1 239 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 36 181 5.5E-52 T 11-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 TF3313_2850 a58e6f83b19ac210325b5b4c52623dea 485 Pfam PF11692 Protein of unknown function (DUF3289) 298 481 6.7E-23 T 11-10-2018 IPR017483 Conserved hypothetical protein CHP03034 TF3313_2486 cb9c909b81d1226561835bf95c1e0634 369 SMART SM00028 154 187 410.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2486 cb9c909b81d1226561835bf95c1e0634 369 SMART SM00028 222 255 36.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2486 cb9c909b81d1226561835bf95c1e0634 369 SMART SM00028 188 221 7.3E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2486 cb9c909b81d1226561835bf95c1e0634 369 Pfam PF13432 Tetratricopeptide repeat 194 248 3.5E-7 T 11-10-2018 TF3313_2486 cb9c909b81d1226561835bf95c1e0634 369 Gene3D G3DSA:1.25.40.10 20 117 2.9E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2486 cb9c909b81d1226561835bf95c1e0634 369 Gene3D G3DSA:1.25.40.10 118 290 1.9E-26 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2486 cb9c909b81d1226561835bf95c1e0634 369 SUPERFAMILY SSF48452 130 284 8.63E-26 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2390 9c106fbf95babc935d0e588ed7243107 389 Pfam PF01619 Proline dehydrogenase 73 373 3.4E-80 T 11-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 TF3313_2390 9c106fbf95babc935d0e588ed7243107 389 Gene3D G3DSA:3.20.20.220 45 387 1.8E-60 T 11-10-2018 TF3313_2390 9c106fbf95babc935d0e588ed7243107 389 SUPERFAMILY SSF51730 67 387 1.1E-82 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like TF3313_2828 b2888636349a56080e614eeb95428b3c 536 Gene3D G3DSA:3.40.50.300 6 198 4.3E-11 T 11-10-2018 TF3313_1831 1c57f4c7c21301caab016cd930ce03b4 87 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 53 86 1.2E-9 T 11-10-2018 IPR001451 Hexapeptide repeat TF3313_1831 1c57f4c7c21301caab016cd930ce03b4 87 SUPERFAMILY SSF51161 11 86 4.57E-20 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily TF3313_1831 1c57f4c7c21301caab016cd930ce03b4 87 Gene3D G3DSA:2.160.10.10 2 87 9.4E-21 T 11-10-2018 TF3313_0506 2b161d7c9cf0c08126ae490d9861a6f5 395 Gene3D G3DSA:3.40.50.2000 2 222 2.2E-23 T 11-10-2018 TF3313_0506 2b161d7c9cf0c08126ae490d9861a6f5 395 Pfam PF13439 Glycosyltransferase Family 4 19 216 7.1E-16 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 TF3313_0506 2b161d7c9cf0c08126ae490d9861a6f5 395 Gene3D G3DSA:3.40.50.2000 223 367 1.0E-23 T 11-10-2018 TF3313_0506 2b161d7c9cf0c08126ae490d9861a6f5 395 SUPERFAMILY SSF53756 1 393 6.73E-57 T 11-10-2018 TF3313_0506 2b161d7c9cf0c08126ae490d9861a6f5 395 Pfam PF13692 Glycosyl transferases group 1 231 360 8.0E-17 T 11-10-2018 TF3313_0147 6988f9142cd845a665e711d65098b183 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 24 44 4.7E-14 T 11-10-2018 IPR003849 Preprotein translocase YajC TF3313_0147 6988f9142cd845a665e711d65098b183 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 62 80 4.7E-14 T 11-10-2018 IPR003849 Preprotein translocase YajC TF3313_0147 6988f9142cd845a665e711d65098b183 112 Pfam PF02699 Preprotein translocase subunit 27 100 7.8E-28 T 11-10-2018 IPR003849 Preprotein translocase YajC TF3313_0147 6988f9142cd845a665e711d65098b183 112 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 26 101 2.8E-25 T 11-10-2018 IPR003849 Preprotein translocase YajC TF3313_0147 6988f9142cd845a665e711d65098b183 112 SMART SM01323 22 104 2.0E-36 T 11-10-2018 IPR003849 Preprotein translocase YajC TF3313_1474 7385955c81b1569e9b9bd1429d659d41 191 SUPERFAMILY SSF55961 31 188 1.22E-7 T 11-10-2018 TF3313_1558 f279d0e5de4e79662e72736029562926 292 Gene3D G3DSA:3.90.550.10 1 254 4.7E-58 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_1558 f279d0e5de4e79662e72736029562926 292 Pfam PF00535 Glycosyl transferase family 2 17 174 2.0E-26 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TF3313_1558 f279d0e5de4e79662e72736029562926 292 SUPERFAMILY SSF53448 16 230 8.25E-54 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_0876 754305d391e1bb29076b7b0fc7cb42e7 238 Gene3D G3DSA:1.25.10.90 2 230 2.9E-49 T 11-10-2018 TF3313_0876 754305d391e1bb29076b7b0fc7cb42e7 238 SUPERFAMILY SSF48371 9 222 4.8E-47 T 11-10-2018 IPR016024 Armadillo-type fold TF3313_0876 754305d391e1bb29076b7b0fc7cb42e7 238 Pfam PF08713 DNA alkylation repair enzyme 6 220 1.3E-68 T 11-10-2018 IPR014825 DNA alkylation repair enzyme TF3313_1459 ecfa69edc34755cff62b4823d3ea40a2 782 SUPERFAMILY SSF82866 204 392 2.22E-29 T 11-10-2018 TF3313_1459 ecfa69edc34755cff62b4823d3ea40a2 782 Gene3D G3DSA:1.20.1640.10 235 402 2.8E-16 T 11-10-2018 TF3313_1459 ecfa69edc34755cff62b4823d3ea40a2 782 SUPERFAMILY SSF82866 560 774 9.68E-34 T 11-10-2018 TF3313_1459 ecfa69edc34755cff62b4823d3ea40a2 782 Gene3D G3DSA:1.20.1640.10 593 781 1.6E-15 T 11-10-2018 TF3313_1459 ecfa69edc34755cff62b4823d3ea40a2 782 Gene3D G3DSA:1.20.1640.10 403 444 2.8E-16 T 11-10-2018 TF3313_1459 ecfa69edc34755cff62b4823d3ea40a2 782 Pfam PF03176 MMPL family 151 403 2.2E-22 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 TF3313_1459 ecfa69edc34755cff62b4823d3ea40a2 782 Pfam PF03176 MMPL family 564 770 8.5E-10 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 TF3313_2186 f1ea4d98d41c098704099d18862056cf 119 SUPERFAMILY SSF81301 4 115 1.11E-32 T 11-10-2018 TF3313_2186 f1ea4d98d41c098704099d18862056cf 119 Gene3D G3DSA:3.30.460.10 2 116 4.7E-32 T 11-10-2018 TF3313_2186 f1ea4d98d41c098704099d18862056cf 119 Pfam PF02410 Ribosomal silencing factor during starvation 10 107 3.4E-25 T 11-10-2018 TF3313_2186 f1ea4d98d41c098704099d18862056cf 119 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 4 108 22.005 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS TF3313_2186 f1ea4d98d41c098704099d18862056cf 119 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 107 4.5E-31 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS TF3313_1618 c5ef30dbc9d8cf2fe208e5166d5091a0 349 SUPERFAMILY SSF111337 1 349 8.11E-115 T 11-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 TF3313_1618 c5ef30dbc9d8cf2fe208e5166d5091a0 349 Pfam PF02547 Queuosine biosynthesis protein 3 348 5.9E-124 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 TF3313_1618 c5ef30dbc9d8cf2fe208e5166d5091a0 349 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 349 1.5E-108 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 TF3313_1618 c5ef30dbc9d8cf2fe208e5166d5091a0 349 Gene3D G3DSA:2.40.10.240 64 170 4.4E-105 T 11-10-2018 TF3313_1618 c5ef30dbc9d8cf2fe208e5166d5091a0 349 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 349 39.849 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 TF3313_1618 c5ef30dbc9d8cf2fe208e5166d5091a0 349 Gene3D G3DSA:3.40.1780.10 14 348 4.4E-105 T 11-10-2018 TF3313_0833 82661072c0fabe0e700e3810e36c85a8 294 TIGRFAM TIGR01200 GLPGLI: GLPGLI family protein 38 247 1.5E-55 T 11-10-2018 IPR005901 GLPGLI family protein TF3313_0833 82661072c0fabe0e700e3810e36c85a8 294 Pfam PF09697 Protein of unknown function (Porph_ging) 178 203 7.0E-7 T 11-10-2018 IPR005901 GLPGLI family protein TF3313_0421 664b94d11f8261065db8c94544717141 195 Pfam PF14253 Bacteriophage abortive infection AbiH 4 182 1.1E-17 T 11-10-2018 IPR025935 Bacteriophage abortive infection AbiH TF3313_0762 cfaecab4fcdfc55cfb1bd5d70a6332e8 980 Gene3D G3DSA:1.10.10.10 911 979 9.2E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_0762 cfaecab4fcdfc55cfb1bd5d70a6332e8 980 SUPERFAMILY SSF63829 202 413 1.5E-7 T 11-10-2018 TF3313_0762 cfaecab4fcdfc55cfb1bd5d70a6332e8 980 SMART SM00421 919 976 0.0026 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TF3313_0762 cfaecab4fcdfc55cfb1bd5d70a6332e8 980 Gene3D G3DSA:2.60.40.10 664 779 7.6E-12 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_0762 cfaecab4fcdfc55cfb1bd5d70a6332e8 980 SUPERFAMILY SSF63829 465 647 4.36E-6 T 11-10-2018 TF3313_0762 cfaecab4fcdfc55cfb1bd5d70a6332e8 980 Pfam PF07495 Y_Y_Y domain 718 765 2.7E-6 T 11-10-2018 IPR011123 Two component regulator three Y TF3313_0762 cfaecab4fcdfc55cfb1bd5d70a6332e8 980 SUPERFAMILY SSF46894 912 977 1.63E-9 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TF3313_0762 cfaecab4fcdfc55cfb1bd5d70a6332e8 980 Gene3D G3DSA:2.130.10.10 60 194 2.5E-5 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TF3313_0762 cfaecab4fcdfc55cfb1bd5d70a6332e8 980 Gene3D G3DSA:2.130.10.10 208 442 8.3E-15 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TF3313_2725 5f7e23ae9bb51bd1b102fee3edd2006c 81 Pfam PF03572 Peptidase family S41 9 62 3.2E-5 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 TF3313_2725 5f7e23ae9bb51bd1b102fee3edd2006c 81 Gene3D G3DSA:3.90.226.10 2 79 1.5E-5 T 11-10-2018 TF3313_0130 f55cd2216412bd84a5955ed5118917ec 421 Gene3D G3DSA:1.20.1600.10 1 414 2.8E-73 T 11-10-2018 TF3313_0130 f55cd2216412bd84a5955ed5118917ec 421 Pfam PF02321 Outer membrane efflux protein 1 189 5.0E-23 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TF3313_0130 f55cd2216412bd84a5955ed5118917ec 421 Pfam PF02321 Outer membrane efflux protein 220 403 5.0E-24 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TF3313_0130 f55cd2216412bd84a5955ed5118917ec 421 SUPERFAMILY SSF56954 2 414 3.14E-66 T 11-10-2018 TF3313_0840 a4e1a6ed9990f976e4ed8af5ab0d709f 353 SUPERFAMILY SSF53756 8 348 1.02E-52 T 11-10-2018 TF3313_0840 a4e1a6ed9990f976e4ed8af5ab0d709f 353 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 78 295 3.2E-18 T 11-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 TF3313_0840 a4e1a6ed9990f976e4ed8af5ab0d709f 353 Gene3D G3DSA:3.40.50.2000 167 349 7.0E-16 T 11-10-2018 TF3313_0840 a4e1a6ed9990f976e4ed8af5ab0d709f 353 Gene3D G3DSA:3.40.50.2000 2 158 1.2E-30 T 11-10-2018 TF3313_0617 4a0096914736848e6151722ecd926f5b 559 Gene3D G3DSA:3.40.50.12780 3 449 1.3E-84 T 11-10-2018 TF3313_0617 4a0096914736848e6151722ecd926f5b 559 SUPERFAMILY SSF56801 5 550 8.24E-96 T 11-10-2018 TF3313_0617 4a0096914736848e6151722ecd926f5b 559 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 11-10-2018 IPR020845 AMP-binding, conserved site TF3313_0617 4a0096914736848e6151722ecd926f5b 559 Pfam PF00501 AMP-binding enzyme 26 452 1.4E-76 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TF3313_1007 b02a28ff830528a8ade94b36b5075b82 418 ProSitePatterns PS01047 Heavy-metal-associated domain. 358 387 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 TF3313_1007 b02a28ff830528a8ade94b36b5075b82 418 Gene3D G3DSA:3.30.70.100 340 416 9.8E-19 T 11-10-2018 TF3313_1007 b02a28ff830528a8ade94b36b5075b82 418 SUPERFAMILY SSF55008 348 413 1.57E-16 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 TF3313_1007 b02a28ff830528a8ade94b36b5075b82 418 Pfam PF00403 Heavy-metal-associated domain 356 412 1.2E-12 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TF3313_1007 b02a28ff830528a8ade94b36b5075b82 418 Pfam PF03773 Predicted permease 5 295 4.4E-54 T 11-10-2018 IPR005524 Predicted permease DUF318 TF3313_2054 6a897e6a7d00188bb683ed5f5f5125e4 315 SUPERFAMILY SSF51735 1 310 6.55E-90 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_2054 6a897e6a7d00188bb683ed5f5f5125e4 315 Gene3D G3DSA:3.90.25.10 183 307 2.7E-107 T 11-10-2018 TF3313_2054 6a897e6a7d00188bb683ed5f5f5125e4 315 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 303 6.0E-55 T 11-10-2018 IPR016040 NAD(P)-binding domain TF3313_2054 6a897e6a7d00188bb683ed5f5f5125e4 315 Gene3D G3DSA:3.40.50.720 3 294 2.7E-107 T 11-10-2018 TF3313_2809 f9f5a8710dd78679e64195ed4bb66fa3 295 Pfam PF05598 Transposase domain (DUF772) 1 65 6.8E-18 T 11-10-2018 IPR008490 Transposase InsH, N-terminal TF3313_2809 f9f5a8710dd78679e64195ed4bb66fa3 295 Pfam PF01609 Transposase DDE domain 80 282 6.0E-38 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 TF3313_1689 7b5fb97f3fa2c941bd4fa646d339f7e0 498 Gene3D G3DSA:3.40.50.880 259 436 1.1E-18 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TF3313_1689 7b5fb97f3fa2c941bd4fa646d339f7e0 498 SUPERFAMILY SSF52540 11 248 4.34E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1689 7b5fb97f3fa2c941bd4fa646d339f7e0 498 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 12 238 4.4E-17 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain TF3313_1689 7b5fb97f3fa2c941bd4fa646d339f7e0 498 Gene3D G3DSA:3.40.50.300 8 254 3.3E-51 T 11-10-2018 TF3313_1689 7b5fb97f3fa2c941bd4fa646d339f7e0 498 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 261 445 1.9E-51 T 11-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 TF3313_1689 7b5fb97f3fa2c941bd4fa646d339f7e0 498 SUPERFAMILY SSF52317 199 403 2.37E-33 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TF3313_1689 7b5fb97f3fa2c941bd4fa646d339f7e0 498 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 11 489 1.2E-148 T 11-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 TF3313_1689 7b5fb97f3fa2c941bd4fa646d339f7e0 498 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 497 165.188 T 11-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 TF3313_0260 33977b6521ca60a86f19241df788dd55 268 SUPERFAMILY SSF56281 1 254 4.46E-38 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TF3313_0260 33977b6521ca60a86f19241df788dd55 268 SMART SM00849 13 195 2.1E-5 T 11-10-2018 IPR001279 Metallo-beta-lactamase TF3313_0260 33977b6521ca60a86f19241df788dd55 268 Gene3D G3DSA:3.60.15.10 10 253 2.0E-43 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TF3313_0260 33977b6521ca60a86f19241df788dd55 268 Pfam PF12706 Beta-lactamase superfamily domain 26 205 4.2E-25 T 11-10-2018 IPR001279 Metallo-beta-lactamase TF3313_0406 a3a2dbbabee21e502a00353f6f7197a6 104 SUPERFAMILY SSF46785 5 103 9.09E-31 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TF3313_0406 a3a2dbbabee21e502a00353f6f7197a6 104 Gene3D G3DSA:1.10.10.10 1 104 4.3E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_0406 a3a2dbbabee21e502a00353f6f7197a6 104 Pfam PF01638 HxlR-like helix-turn-helix 19 103 1.1E-26 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type TF3313_2439 8466c61452a6db5ee24ee0104b7c7579 344 Gene3D G3DSA:2.40.30.170 50 266 2.1E-59 T 11-10-2018 TF3313_2439 8466c61452a6db5ee24ee0104b7c7579 344 Gene3D G3DSA:2.40.50.100 65 190 2.1E-59 T 11-10-2018 TF3313_2439 8466c61452a6db5ee24ee0104b7c7579 344 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 340 7.0E-60 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TF3313_2439 8466c61452a6db5ee24ee0104b7c7579 344 Gene3D G3DSA:1.10.287.470 99 151 2.1E-59 T 11-10-2018 TF3313_2439 8466c61452a6db5ee24ee0104b7c7579 344 Gene3D G3DSA:2.40.420.20 43 331 2.1E-59 T 11-10-2018 TF3313_2439 8466c61452a6db5ee24ee0104b7c7579 344 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 259 4.6E-30 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TF3313_2439 8466c61452a6db5ee24ee0104b7c7579 344 SUPERFAMILY SSF111369 55 266 5.23E-27 T 11-10-2018 TF3313_1093 a96df30ff9d75f158ea1b84cb56450b7 437 SUPERFAMILY SSF53300 231 359 5.78E-6 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TF3313_1093 a96df30ff9d75f158ea1b84cb56450b7 437 Pfam PF01882 Protein of unknown function DUF58 193 277 2.2E-18 T 11-10-2018 IPR002881 Domain of unknown function DUF58 TF3313_1774 02cd86813c5f5ec6d9fb2ec77e859c44 410 Gene3D G3DSA:3.40.50.2000 225 398 9.9E-40 T 11-10-2018 TF3313_1774 02cd86813c5f5ec6d9fb2ec77e859c44 410 SUPERFAMILY SSF53756 51 398 1.41E-18 T 11-10-2018 TF3313_1774 02cd86813c5f5ec6d9fb2ec77e859c44 410 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 46 207 5.7E-52 T 11-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 TF3313_1774 02cd86813c5f5ec6d9fb2ec77e859c44 410 Gene3D G3DSA:3.40.50.11720 33 205 7.7E-40 T 11-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 TF3313_2923 bfadfa7e38ad60f875fb1bae69e73b89 353 Gene3D G3DSA:3.20.20.70 22 353 5.0E-124 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_2923 bfadfa7e38ad60f875fb1bae69e73b89 353 Pfam PF01116 Fructose-bisphosphate aldolase class-II 32 352 4.9E-99 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 TF3313_2923 bfadfa7e38ad60f875fb1bae69e73b89 353 SUPERFAMILY SSF51569 31 352 3.66E-97 T 11-10-2018 TF3313_2923 bfadfa7e38ad60f875fb1bae69e73b89 353 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 31 352 3.6E-110 T 11-10-2018 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 TF3313_2923 bfadfa7e38ad60f875fb1bae69e73b89 353 PIRSF PIRSF001359 29 353 3.9E-88 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 TF3313_2923 bfadfa7e38ad60f875fb1bae69e73b89 353 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 31 352 1.6E-83 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 TF3313_0526 c2f694ee2209ecf9126bdcbad010c560 157 SUPERFAMILY SSF52980 10 125 6.43E-16 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 TF3313_0526 c2f694ee2209ecf9126bdcbad010c560 157 Pfam PF04480 Protein of unknown function (DUF559) 13 115 4.0E-29 T 11-10-2018 IPR007569 Protein of unknown function DUF559 TF3313_0526 c2f694ee2209ecf9126bdcbad010c560 157 Gene3D G3DSA:3.40.960.10 21 121 7.2E-26 T 11-10-2018 TF3313_0640 a804ca89ea0f9095529cf063fd367db4 432 SMART SM00245 186 406 1.4E-5 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 TF3313_0640 a804ca89ea0f9095529cf063fd367db4 432 Pfam PF03572 Peptidase family S41 227 405 1.7E-25 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 TF3313_0640 a804ca89ea0f9095529cf063fd367db4 432 Gene3D G3DSA:3.90.226.10 194 430 3.5E-46 T 11-10-2018 TF3313_0640 a804ca89ea0f9095529cf063fd367db4 432 Gene3D G3DSA:3.30.750.44 12 108 2.7E-9 T 11-10-2018 TF3313_0640 a804ca89ea0f9095529cf063fd367db4 432 SUPERFAMILY SSF52096 34 428 1.86E-48 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TF3313_2629 976a5272c2fa8e1739549fa493f46ef0 396 Gene3D G3DSA:3.90.1150.10 40 385 2.7E-130 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TF3313_2629 976a5272c2fa8e1739549fa493f46ef0 396 Gene3D G3DSA:3.40.640.10 58 294 2.7E-130 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TF3313_2629 976a5272c2fa8e1739549fa493f46ef0 396 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 6 395 1.7E-211 T 11-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 TF3313_2629 976a5272c2fa8e1739549fa493f46ef0 396 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 393 51.71 T 11-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 TF3313_2629 976a5272c2fa8e1739549fa493f46ef0 396 Pfam PF00155 Aminotransferase class I and II 43 384 4.3E-69 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TF3313_2629 976a5272c2fa8e1739549fa493f46ef0 396 SUPERFAMILY SSF53383 4 393 4.74E-114 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TF3313_1954 dc3dfd656da90e30f5168de5aa71f276 205 SUPERFAMILY SSF52980 1 203 9.12E-54 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 TF3313_1954 dc3dfd656da90e30f5168de5aa71f276 205 Pfam PF09195 Restriction endonuclease BglII 11 203 1.4E-30 T 11-10-2018 IPR015278 Type-2 restriction enzyme BglII GO:0009036|GO:0009307 TF3313_1954 dc3dfd656da90e30f5168de5aa71f276 205 Gene3D G3DSA:3.40.91.20 1 204 6.1E-77 T 11-10-2018 IPR011338 Restriction endonuclease, type II, BamHI/BglIII/BstY GO:0000287|GO:0003677|GO:0009036|GO:0009307 TF3313_0274 b85f0adec4d3478c7c828ebf189dca1f 440 Pfam PF01554 MatE 13 173 5.0E-25 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TF3313_0274 b85f0adec4d3478c7c828ebf189dca1f 440 Pfam PF01554 MatE 241 398 2.6E-13 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TF3313_0274 b85f0adec4d3478c7c828ebf189dca1f 440 TIGRFAM TIGR00797 matE: MATE efflux family protein 13 401 1.0E-55 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TF3313_0274 b85f0adec4d3478c7c828ebf189dca1f 440 PIRSF PIRSF006603 3 440 5.8E-57 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TF3313_1547 00f562531a5775354fed6e976a2c2130 333 Pfam PF04389 Peptidase family M28 108 329 5.5E-42 T 11-10-2018 IPR007484 Peptidase M28 TF3313_1547 00f562531a5775354fed6e976a2c2130 333 SUPERFAMILY SSF53187 39 332 4.86E-49 T 11-10-2018 TF3313_1547 00f562531a5775354fed6e976a2c2130 333 Gene3D G3DSA:3.40.630.10 42 333 8.9E-86 T 11-10-2018 TF3313_1457 48913e3110b13f9c96b56f6971277fdd 445 Gene3D G3DSA:2.40.30.10 363 445 2.7E-9 T 11-10-2018 TF3313_1457 48913e3110b13f9c96b56f6971277fdd 445 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 92 445 31.908 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 TF3313_1457 48913e3110b13f9c96b56f6971277fdd 445 SUPERFAMILY SSF52402 88 330 1.63E-39 T 11-10-2018 TF3313_1457 48913e3110b13f9c96b56f6971277fdd 445 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 93 444 1.7E-105 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 TF3313_1457 48913e3110b13f9c96b56f6971277fdd 445 Pfam PF03054 tRNA methyl transferase 93 444 1.3E-107 T 11-10-2018 TF3313_1457 48913e3110b13f9c96b56f6971277fdd 445 Gene3D G3DSA:3.40.50.620 83 297 4.4E-69 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_1457 48913e3110b13f9c96b56f6971277fdd 445 Gene3D G3DSA:2.30.30.280 298 360 8.5E-22 T 11-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 TF3313_0684 bdfa50b6de9d64bee4ab4ba2c669033f 197 Pfam PF11307 Protein of unknown function (DUF3109) 1 180 3.4E-80 T 11-10-2018 IPR021458 Protein of unknown function DUF3109 TF3313_2372 31ca48706d6cd6d0bb620009c869239c 141 SUPERFAMILY SSF55021 72 140 6.99E-13 T 11-10-2018 TF3313_2372 31ca48706d6cd6d0bb620009c869239c 141 SUPERFAMILY SSF55021 2 67 3.62E-13 T 11-10-2018 TF3313_2372 31ca48706d6cd6d0bb620009c869239c 141 Gene3D G3DSA:3.30.2130.10 1 141 4.1E-46 T 11-10-2018 TF3313_2549 864679a8bc57efc73fd0fe92aa1a4d89 92 SMART SM00411 1 90 3.0E-22 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TF3313_2549 864679a8bc57efc73fd0fe92aa1a4d89 92 SUPERFAMILY SSF47729 1 89 3.53E-23 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 TF3313_2549 864679a8bc57efc73fd0fe92aa1a4d89 92 Pfam PF00216 Bacterial DNA-binding protein 1 89 1.6E-24 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TF3313_2549 864679a8bc57efc73fd0fe92aa1a4d89 92 Gene3D G3DSA:4.10.520.10 1 92 2.6E-24 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 TF3313_1455 a7976a0e2ee581a6c796b67cb157f58f 314 Gene3D G3DSA:3.40.50.2020 10 301 3.2E-113 T 11-10-2018 TF3313_1455 a7976a0e2ee581a6c796b67cb157f58f 314 Gene3D G3DSA:3.40.50.2020 149 288 3.2E-113 T 11-10-2018 TF3313_1455 a7976a0e2ee581a6c796b67cb157f58f 314 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 130 145 - T 11-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 TF3313_1455 a7976a0e2ee581a6c796b67cb157f58f 314 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 9 311 1.6E-108 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 TF3313_1455 a7976a0e2ee581a6c796b67cb157f58f 314 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 8 122 1.1E-42 T 11-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 TF3313_1455 a7976a0e2ee581a6c796b67cb157f58f 314 SUPERFAMILY SSF53271 71 302 1.33E-53 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like TF3313_1455 a7976a0e2ee581a6c796b67cb157f58f 314 Pfam PF14572 Phosphoribosyl synthetase-associated domain 200 311 2.8E-24 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 TF3313_1455 a7976a0e2ee581a6c796b67cb157f58f 314 SMART SM01400 7 122 4.0E-67 T 11-10-2018 TF3313_1530 68f4451067fbc58e46fe2782a4ef32be 458 Pfam PF01458 Uncharacterized protein family (UPF0051) 195 419 9.2E-69 T 11-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 TF3313_1530 68f4451067fbc58e46fe2782a4ef32be 458 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 162 436 2.1E-75 T 11-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 TF3313_1530 68f4451067fbc58e46fe2782a4ef32be 458 SUPERFAMILY SSF101960 29 444 4.84E-100 T 11-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily TF3313_0648 3f363de186824377105f1f14a593ea31 463 Gene3D G3DSA:3.40.50.1110 99 447 6.6E-62 T 11-10-2018 IPR036514 SGNH hydrolase superfamily TF3313_0648 3f363de186824377105f1f14a593ea31 463 Gene3D G3DSA:2.60.120.1360 133 287 6.6E-62 T 11-10-2018 TF3313_0648 3f363de186824377105f1f14a593ea31 463 SUPERFAMILY SSF52266 102 451 3.97E-21 T 11-10-2018 TF3313_0648 3f363de186824377105f1f14a593ea31 463 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 104 446 1.1E-13 T 11-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 TF3313_0514 8e3a48c3de3199d37747239eb56b6d75 269 Pfam PF10531 SLBB domain 147 196 4.5E-7 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TF3313_0514 8e3a48c3de3199d37747239eb56b6d75 269 Pfam PF02563 Polysaccharide biosynthesis/export protein 43 143 8.7E-15 T 11-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 TF3313_0514 8e3a48c3de3199d37747239eb56b6d75 269 Gene3D G3DSA:3.10.560.10 124 228 2.2E-21 T 11-10-2018 TF3313_1273 6e284b9163bd321eeb394decb7ff7d52 315 Pfam PF01544 CorA-like Mg2+ transporter protein 30 311 3.0E-56 T 11-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 TF3313_1273 6e284b9163bd321eeb394decb7ff7d52 315 SUPERFAMILY SSF143865 23 252 1.26E-27 T 11-10-2018 TF3313_1273 6e284b9163bd321eeb394decb7ff7d52 315 Gene3D G3DSA:1.20.58.340 239 315 4.0E-29 T 11-10-2018 TF3313_1273 6e284b9163bd321eeb394decb7ff7d52 315 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 4 315 1.5E-65 T 11-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 TF3313_1273 6e284b9163bd321eeb394decb7ff7d52 315 SUPERFAMILY SSF144083 250 313 1.7E-22 T 11-10-2018 TF3313_0085 73c35c9c4befc258bcd90692888b6363 437 Gene3D G3DSA:2.40.30.170 307 420 3.3E-6 T 11-10-2018 TF3313_0085 73c35c9c4befc258bcd90692888b6363 437 Gene3D G3DSA:1.10.287.470 170 259 2.2E-5 T 11-10-2018 TF3313_0085 73c35c9c4befc258bcd90692888b6363 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 80 100 8.5E-6 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TF3313_0085 73c35c9c4befc258bcd90692888b6363 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 307 328 8.5E-6 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TF3313_0085 73c35c9c4befc258bcd90692888b6363 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 341 365 8.5E-6 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TF3313_0085 73c35c9c4befc258bcd90692888b6363 437 Pfam PF13437 HlyD family secretion protein 295 393 6.1E-14 T 11-10-2018 TF3313_1586 eed357f2182ee75124bcdfed93296c4f 637 Gene3D G3DSA:3.40.50.300 1 200 7.3E-75 T 11-10-2018 TF3313_1586 eed357f2182ee75124bcdfed93296c4f 637 Pfam PF16124 RecQ zinc-binding 518 565 3.2E-12 T 11-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain TF3313_1586 eed357f2182ee75124bcdfed93296c4f 637 Pfam PF00271 Helicase conserved C-terminal domain 213 319 2.8E-19 T 11-10-2018 IPR001650 Helicase, C-terminal TF3313_1586 eed357f2182ee75124bcdfed93296c4f 637 SUPERFAMILY SSF52540 57 336 5.7E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1586 eed357f2182ee75124bcdfed93296c4f 637 Gene3D G3DSA:1.10.10.10 511 615 1.8E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_1586 eed357f2182ee75124bcdfed93296c4f 637 SMART SM00490 240 321 1.7E-25 T 11-10-2018 IPR001650 Helicase, C-terminal TF3313_1586 eed357f2182ee75124bcdfed93296c4f 637 Gene3D G3DSA:3.40.50.300 201 384 3.5E-47 T 11-10-2018 TF3313_1586 eed357f2182ee75124bcdfed93296c4f 637 SMART SM00487 13 209 1.7E-30 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TF3313_1586 eed357f2182ee75124bcdfed93296c4f 637 Pfam PF00270 DEAD/DEAH box helicase 19 181 3.5E-20 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TF3313_1586 eed357f2182ee75124bcdfed93296c4f 637 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 6 365 5.5E-117 T 11-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 TF3313_0038 7f09ea973be16132c966392fcf4027b8 488 SUPERFAMILY SSF53448 246 469 7.13E-36 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_0038 7f09ea973be16132c966392fcf4027b8 488 Pfam PF00535 Glycosyl transferase family 2 246 370 5.7E-21 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TF3313_0038 7f09ea973be16132c966392fcf4027b8 488 Gene3D G3DSA:3.90.550.10 238 487 1.6E-35 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_0038 7f09ea973be16132c966392fcf4027b8 488 Gene3D G3DSA:3.90.550.10 87 224 1.2E-5 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_2939 e9afc0859aaaf2425981f8aae80345dd 808 SUPERFAMILY SSF56601 253 773 6.13E-96 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TF3313_2939 e9afc0859aaaf2425981f8aae80345dd 808 SUPERFAMILY SSF53955 80 299 6.47E-63 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily TF3313_2939 e9afc0859aaaf2425981f8aae80345dd 808 Gene3D G3DSA:3.40.710.10 350 436 4.1E-5 T 11-10-2018 TF3313_2939 e9afc0859aaaf2425981f8aae80345dd 808 Gene3D G3DSA:3.40.710.10 463 802 2.7E-82 T 11-10-2018 TF3313_2939 e9afc0859aaaf2425981f8aae80345dd 808 Gene3D G3DSA:1.10.3810.10 84 286 7.2E-64 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TF3313_2939 e9afc0859aaaf2425981f8aae80345dd 808 Pfam PF00905 Penicillin binding protein transpeptidase domain 484 723 2.7E-21 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 TF3313_2939 e9afc0859aaaf2425981f8aae80345dd 808 Pfam PF00912 Transglycosylase 91 272 1.6E-54 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TF3313_2552 f1a838cb2e074dd7d8ffc9e1278f7991 149 SUPERFAMILY SSF50249 1 149 2.36E-46 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TF3313_2552 f1a838cb2e074dd7d8ffc9e1278f7991 149 Gene3D G3DSA:2.40.50.140 1 125 3.2E-41 T 11-10-2018 TF3313_2552 f1a838cb2e074dd7d8ffc9e1278f7991 149 Pfam PF00436 Single-strand binding protein family 3 107 2.6E-36 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 TF3313_2552 f1a838cb2e074dd7d8ffc9e1278f7991 149 Hamap MF_00984 Single-stranded DNA-binding protein. 3 112 32.545 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 TF3313_2552 f1a838cb2e074dd7d8ffc9e1278f7991 149 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 131 3.9E-42 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 TF3313_2066 23c504b0c32df89f21e74f5865032cce 420 SUPERFAMILY SSF56954 5 417 4.84E-44 T 11-10-2018 TF3313_2066 23c504b0c32df89f21e74f5865032cce 420 Gene3D G3DSA:1.20.1600.10 11 420 2.3E-47 T 11-10-2018 TF3313_2066 23c504b0c32df89f21e74f5865032cce 420 Pfam PF02321 Outer membrane efflux protein 19 196 5.2E-16 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TF3313_2418 c97046ffc30b62df0a9899d6ab2ffb3e 99 Pfam PF13146 TRL-like protein family 23 99 1.5E-25 T 11-10-2018 IPR025113 TRL-like protein family TF3313_2418 c97046ffc30b62df0a9899d6ab2ffb3e 99 ProDom PD170898 LIPOPROTEIN TRL MEMBRANE OUTER TRNA-ASSOCIATED OUTERMEMBRANE LOCUS 11 99 1.0E-14 T 11-10-2018 TF3313_2407 1a7e88e84f412130c0f4203d13568a14 514 Pfam PF11276 Protein of unknown function (DUF3078) 254 348 4.0E-19 T 11-10-2018 IPR021428 Protein of unknown function DUF3078 TF3313_1393 9e95362c5199d9c278a325cd2ad19641 686 Gene3D G3DSA:1.20.120.1470 342 425 1.7E-12 T 11-10-2018 TF3313_1393 9e95362c5199d9c278a325cd2ad19641 686 Gene3D G3DSA:1.20.120.1470 236 341 8.2E-21 T 11-10-2018 TF3313_1393 9e95362c5199d9c278a325cd2ad19641 686 Pfam PF03571 Peptidase family M49 479 616 2.0E-9 T 11-10-2018 IPR039461 Peptidase family M49 TF3313_1393 9e95362c5199d9c278a325cd2ad19641 686 Pfam PF03571 Peptidase family M49 246 477 8.5E-43 T 11-10-2018 IPR039461 Peptidase family M49 TF3313_0817 844e66fa2814eaac5c19b51be669faf6 398 SUPERFAMILY SSF53474 66 255 3.94E-17 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TF3313_0817 844e66fa2814eaac5c19b51be669faf6 398 Gene3D G3DSA:3.40.50.1820 62 263 2.3E-21 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TF3313_0628 3bef231ac7a5c9b4e24ceaa3eb1c2a5e 117 Pfam PF04237 YjbR 11 101 2.4E-27 T 11-10-2018 IPR007351 Uncharacterised protein YjbR TF3313_0628 3bef231ac7a5c9b4e24ceaa3eb1c2a5e 117 SUPERFAMILY SSF142906 1 115 3.92E-40 T 11-10-2018 IPR038056 YjbR-like superfamily TF3313_0628 3bef231ac7a5c9b4e24ceaa3eb1c2a5e 117 Gene3D G3DSA:3.90.1150.30 1 117 6.0E-41 T 11-10-2018 IPR038056 YjbR-like superfamily TF3313_2194 3ca62fe77a65f1dd367fd29f6646fe1f 314 Gene3D G3DSA:3.20.20.70 1 311 5.1E-105 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_2194 3ca62fe77a65f1dd367fd29f6646fe1f 314 Pfam PF03060 Nitronate monooxygenase 78 300 3.3E-46 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 TF3313_2194 3ca62fe77a65f1dd367fd29f6646fe1f 314 Pfam PF03060 Nitronate monooxygenase 3 73 8.8E-18 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 TF3313_2194 3ca62fe77a65f1dd367fd29f6646fe1f 314 SUPERFAMILY SSF51412 2 285 1.07E-66 T 11-10-2018 TF3313_0592 1a43f758c2d1ac7b37b73df64a03c185 209 Pfam PF03592 Terminase small subunit 23 177 3.9E-25 T 11-10-2018 IPR005335 Terminase small subunit GO:0006323 TF3313_0592 1a43f758c2d1ac7b37b73df64a03c185 209 Gene3D G3DSA:1.10.10.1400 19 83 3.2E-17 T 11-10-2018 IPR038713 Terminase small subunit, N-terminal domain superfamily TF3313_0884 abaf5bec74f55ff486ace9ac89f52ab7 769 Gene3D G3DSA:2.130.10.10 583 713 1.6E-11 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TF3313_0884 abaf5bec74f55ff486ace9ac89f52ab7 769 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 688 758 8.4E-6 T 11-10-2018 IPR026444 Secretion system C-terminal sorting domain TF3313_0884 abaf5bec74f55ff486ace9ac89f52ab7 769 SUPERFAMILY SSF63829 284 552 2.39E-10 T 11-10-2018 TF3313_0884 abaf5bec74f55ff486ace9ac89f52ab7 769 Gene3D G3DSA:2.130.10.10 264 582 3.0E-12 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TF3313_0884 abaf5bec74f55ff486ace9ac89f52ab7 769 SUPERFAMILY SSF63829 598 735 3.27E-8 T 11-10-2018 TF3313_0285 54c903be21597a67c57041cc68b0f107 287 Pfam PF08867 FRG domain 27 116 4.4E-13 T 11-10-2018 IPR014966 FRG domain TF3313_0285 54c903be21597a67c57041cc68b0f107 287 SMART SM00901 23 123 2.9E-13 T 11-10-2018 IPR014966 FRG domain TF3313_2273 4b656f7df4231925b86920284d2c808c 486 SUPERFAMILY SSF82171 151 434 5.62E-23 T 11-10-2018 TF3313_2273 4b656f7df4231925b86920284d2c808c 486 Pfam PF07676 WD40-like Beta Propeller Repeat 347 370 0.0038 T 11-10-2018 IPR011659 WD40-like Beta Propeller TF3313_2273 4b656f7df4231925b86920284d2c808c 486 Pfam PF07676 WD40-like Beta Propeller Repeat 282 300 1.4E-5 T 11-10-2018 IPR011659 WD40-like Beta Propeller TF3313_2273 4b656f7df4231925b86920284d2c808c 486 Gene3D G3DSA:2.120.10.30 192 333 9.0E-10 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TF3313_2273 4b656f7df4231925b86920284d2c808c 486 Gene3D G3DSA:2.120.10.30 335 438 4.7E-11 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TF3313_2173 69a0a4d05a96983a73d79248d1119f4c 733 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 7 726 2.6E-234 T 11-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TF3313_2173 69a0a4d05a96983a73d79248d1119f4c 733 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 2 728 24.946 T 11-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TF3313_2173 69a0a4d05a96983a73d79248d1119f4c 733 Pfam PF03030 Inorganic H+ pyrophosphatase 13 723 1.5E-278 T 11-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TF3313_2173 69a0a4d05a96983a73d79248d1119f4c 733 PIRSF PIRSF001265 1 733 8.0E-273 T 11-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TF3313_1017 454034078471ba439008817c59d625bd 243 Pfam PF00551 Formyl transferase 50 230 2.0E-45 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TF3313_1017 454034078471ba439008817c59d625bd 243 SUPERFAMILY SSF53328 50 236 2.22E-45 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TF3313_1017 454034078471ba439008817c59d625bd 243 Gene3D G3DSA:3.40.50.170 46 242 4.0E-53 T 11-10-2018 TF3313_1017 454034078471ba439008817c59d625bd 243 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 51 236 24.473 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 TF3313_0282 48d4fae876ce114f981880d94fce06a2 200 Pfam PF03167 Uracil DNA glycosylase superfamily 76 185 1.4E-6 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TF3313_2491 2ee7d7fec67a4dce529da20f4ecfa67e 586 PIRSF PIRSF001217 1 580 5.9E-183 T 11-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 TF3313_2491 2ee7d7fec67a4dce529da20f4ecfa67e 586 Gene3D G3DSA:3.90.226.10 78 292 7.8E-157 T 11-10-2018 TF3313_2491 2ee7d7fec67a4dce529da20f4ecfa67e 586 Gene3D G3DSA:3.40.1750.10 169 477 7.8E-157 T 11-10-2018 TF3313_2491 2ee7d7fec67a4dce529da20f4ecfa67e 586 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 302 519 1.2E-57 T 11-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 TF3313_2491 2ee7d7fec67a4dce529da20f4ecfa67e 586 Gene3D G3DSA:3.90.226.10 293 519 7.8E-157 T 11-10-2018 TF3313_2491 2ee7d7fec67a4dce529da20f4ecfa67e 586 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 13 550 1.6E-135 T 11-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 TF3313_2491 2ee7d7fec67a4dce529da20f4ecfa67e 586 SUPERFAMILY SSF52096 299 507 1.76E-42 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TF3313_2491 2ee7d7fec67a4dce529da20f4ecfa67e 586 SUPERFAMILY SSF52096 43 261 6.32E-28 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TF3313_2491 2ee7d7fec67a4dce529da20f4ecfa67e 586 Pfam PF01343 Peptidase family S49 371 521 1.9E-46 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 TF3313_2491 2ee7d7fec67a4dce529da20f4ecfa67e 586 Pfam PF01343 Peptidase family S49 121 270 8.9E-36 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 TF3313_2491 2ee7d7fec67a4dce529da20f4ecfa67e 586 PRINTS PR00127 Clp protease catalytic subunit P signature 346 366 3.0E-5 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TF3313_2491 2ee7d7fec67a4dce529da20f4ecfa67e 586 PRINTS PR00127 Clp protease catalytic subunit P signature 484 503 3.0E-5 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TF3313_2491 2ee7d7fec67a4dce529da20f4ecfa67e 586 PRINTS PR00127 Clp protease catalytic subunit P signature 378 395 3.0E-5 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TF3313_1889 f2eb98960d61ada5af8e4dcd4f0bbc74 145 Pfam PF14058 PcfK-like protein 2 125 3.5E-36 T 11-10-2018 IPR025624 PcfK-like protein TF3313_0632 a6fa146b82b49ba5beeedb827ece6091 533 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 32 96 3.3E-16 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TF3313_0632 a6fa146b82b49ba5beeedb827ece6091 533 Gene3D G3DSA:1.20.150.20 401 529 7.5E-41 T 11-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0632 a6fa146b82b49ba5beeedb827ece6091 533 Gene3D G3DSA:2.40.30.20 6 97 7.4E-31 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TF3313_0632 a6fa146b82b49ba5beeedb827ece6091 533 SUPERFAMILY SSF50615 15 99 1.31E-26 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TF3313_0632 a6fa146b82b49ba5beeedb827ece6091 533 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 400 521 1.0E-40 T 11-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0632 a6fa146b82b49ba5beeedb827ece6091 533 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 8 520 5.6E-230 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0632 a6fa146b82b49ba5beeedb827ece6091 533 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 155 393 9.8E-73 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TF3313_0632 a6fa146b82b49ba5beeedb827ece6091 533 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 6 530 47.752 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0632 a6fa146b82b49ba5beeedb827ece6091 533 Gene3D G3DSA:3.40.50.300 99 400 1.0E-122 T 11-10-2018 TF3313_0632 a6fa146b82b49ba5beeedb827ece6091 533 PIRSF PIRSF039088 6 529 8.9E-235 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TF3313_0632 a6fa146b82b49ba5beeedb827ece6091 533 SUPERFAMILY SSF47917 401 522 1.91E-37 T 11-10-2018 TF3313_0632 a6fa146b82b49ba5beeedb827ece6091 533 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 384 393 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TF3313_0632 a6fa146b82b49ba5beeedb827ece6091 533 SUPERFAMILY SSF52540 101 399 1.3E-91 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2687 ae64fc576e105e28bdd18b1cbc8a1b36 401 Pfam PF00155 Aminotransferase class I and II 33 386 5.1E-48 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TF3313_2687 ae64fc576e105e28bdd18b1cbc8a1b36 401 SUPERFAMILY SSF53383 1 393 1.29E-94 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TF3313_2687 ae64fc576e105e28bdd18b1cbc8a1b36 401 Gene3D G3DSA:3.90.1150.10 15 385 8.8E-126 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TF3313_2687 ae64fc576e105e28bdd18b1cbc8a1b36 401 Gene3D G3DSA:3.40.640.10 45 282 8.8E-126 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TF3313_2662 3a1af302f9df61942062ff52f17b9e49 275 SMART SM00563 84 208 1.3E-4 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TF3313_2662 3a1af302f9df61942062ff52f17b9e49 275 Pfam PF01553 Acyltransferase 70 205 3.4E-8 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TF3313_1021 b45f4b69334d4bd6b4d33ae00bceb56b 117 Pfam PF04237 YjbR 15 106 1.4E-16 T 11-10-2018 IPR007351 Uncharacterised protein YjbR TF3313_1021 b45f4b69334d4bd6b4d33ae00bceb56b 117 Gene3D G3DSA:3.90.1150.30 1 117 8.1E-20 T 11-10-2018 IPR038056 YjbR-like superfamily TF3313_1021 b45f4b69334d4bd6b4d33ae00bceb56b 117 SUPERFAMILY SSF142906 1 113 1.44E-15 T 11-10-2018 IPR038056 YjbR-like superfamily TF3313_2137 2021736c17fa1275c8119e0129106032 480 SUPERFAMILY SSF55073 275 359 7.85E-6 T 11-10-2018 IPR029787 Nucleotide cyclase TF3313_2137 2021736c17fa1275c8119e0129106032 480 Gene3D G3DSA:3.30.70.2230 190 357 1.0E-38 T 11-10-2018 TF3313_2137 2021736c17fa1275c8119e0129106032 480 Pfam PF00990 Diguanylate cyclase, GGDEF domain 276 354 8.9E-5 T 11-10-2018 IPR000160 GGDEF domain TF3313_0131 15ec8e77c3fccd1b755360547502ac8c 1173 Pfam PF04326 Putative DNA-binding domain 784 911 9.5E-13 T 11-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 TF3313_0131 15ec8e77c3fccd1b755360547502ac8c 1173 Gene3D G3DSA:3.30.950.30 768 917 1.6E-15 T 11-10-2018 IPR038461 Schlafen, AAA domain superfamily TF3313_0131 15ec8e77c3fccd1b755360547502ac8c 1173 SUPERFAMILY SSF50249 411 488 5.25E-5 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TF3313_0131 15ec8e77c3fccd1b755360547502ac8c 1173 Gene3D G3DSA:2.40.50.140 405 491 2.0E-5 T 11-10-2018 TF3313_0131 15ec8e77c3fccd1b755360547502ac8c 1173 SMART SM00316 414 489 0.0042 T 11-10-2018 IPR022967 RNA-binding domain, S1 TF3313_2114 d685c53af2404662bffd32bfebf52313 67 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 7 62 1.2E-13 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 TF3313_2114 d685c53af2404662bffd32bfebf52313 67 SUPERFAMILY SSF116842 2 65 4.84E-12 T 11-10-2018 TF3313_2114 d685c53af2404662bffd32bfebf52313 67 Pfam PF02609 Exonuclease VII small subunit 8 59 1.9E-12 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 TF3313_2114 d685c53af2404662bffd32bfebf52313 67 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 7 48 0.002 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 TF3313_2114 d685c53af2404662bffd32bfebf52313 67 Gene3D G3DSA:1.10.287.1040 2 67 1.2E-7 T 11-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 TF3313_2559 91863d96ce69b85244beabd45fde8b93 511 Pfam PF14322 Starch-binding associating with outer membrane 22 218 4.4E-20 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_2559 91863d96ce69b85244beabd45fde8b93 511 Gene3D G3DSA:1.25.40.390 20 507 4.2E-129 T 11-10-2018 TF3313_2559 91863d96ce69b85244beabd45fde8b93 511 SUPERFAMILY SSF48452 18 511 4.17E-122 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2559 91863d96ce69b85244beabd45fde8b93 511 Pfam PF07980 SusD family 279 511 2.2E-39 T 11-10-2018 IPR012944 RagB/SusD domain TF3313_2052 7d8323ced86b2d1df96cda86449abcc1 650 SUPERFAMILY SSF49785 532 607 5.1E-5 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_2052 7d8323ced86b2d1df96cda86449abcc1 650 SUPERFAMILY SSF54001 125 278 8.55E-8 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TF3313_2052 7d8323ced86b2d1df96cda86449abcc1 650 Gene3D G3DSA:2.60.120.260 518 626 7.2E-9 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_2052 7d8323ced86b2d1df96cda86449abcc1 650 Gene3D G3DSA:2.60.120.260 442 517 5.5E-10 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_2065 7be806ebdea73fd3ca8523a001c7c40d 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.2E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TF3313_2065 7be806ebdea73fd3ca8523a001c7c40d 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.2E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TF3313_2065 7be806ebdea73fd3ca8523a001c7c40d 206 Gene3D G3DSA:1.10.357.10 2 205 8.1E-37 T 11-10-2018 TF3313_2065 7be806ebdea73fd3ca8523a001c7c40d 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 6.4E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TF3313_2065 7be806ebdea73fd3ca8523a001c7c40d 206 SUPERFAMILY SSF46689 5 83 8.72E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TF3313_2065 7be806ebdea73fd3ca8523a001c7c40d 206 SUPERFAMILY SSF48498 82 186 2.0E-6 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TF3313_2893 dccc10e6d6704e2a3f91df88aff1f57c 203 Gene3D G3DSA:3.90.850.10 1 202 2.5E-58 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 TF3313_2893 dccc10e6d6704e2a3f91df88aff1f57c 203 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 2 188 8.2E-37 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 TF3313_2893 dccc10e6d6704e2a3f91df88aff1f57c 203 SUPERFAMILY SSF56529 2 202 4.84E-56 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 TF3313_1440 3930a4826c3bf92c3b6325ff62b6af82 257 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TF3313_1440 3930a4826c3bf92c3b6325ff62b6af82 257 SMART SM00382 26 215 4.7E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_1440 3930a4826c3bf92c3b6325ff62b6af82 257 Pfam PF00005 ABC transporter 17 165 1.6E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TF3313_1440 3930a4826c3bf92c3b6325ff62b6af82 257 Gene3D G3DSA:3.40.50.300 1 256 9.2E-63 T 11-10-2018 TF3313_1440 3930a4826c3bf92c3b6325ff62b6af82 257 SUPERFAMILY SSF52540 1 230 3.77E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2866 1056305e3ad9ac167dac94eb932a48e0 158 Pfam PF03703 Bacterial PH domain 66 130 2.1E-5 T 11-10-2018 IPR005182 Domain of unknown function DUF304 TF3313_2290 2f953bff3563f83c2de4bfdf186edde8 155 SUPERFAMILY SSF56925 17 155 3.14E-13 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel TF3313_2290 2f953bff3563f83c2de4bfdf186edde8 155 Pfam PF13505 Outer membrane protein beta-barrel domain 6 155 1.0E-7 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel TF3313_2290 2f953bff3563f83c2de4bfdf186edde8 155 Gene3D G3DSA:2.40.160.20 9 155 9.3E-9 T 11-10-2018 TF3313_0105 664a9313fff01a1d9534a5d6da1c0c69 903 Gene3D G3DSA:3.20.70.20 35 902 2.1E-297 T 11-10-2018 TF3313_0105 664a9313fff01a1d9534a5d6da1c0c69 903 Pfam PF02901 Pyruvate formate lyase-like 55 764 1.2E-143 T 11-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 TF3313_0105 664a9313fff01a1d9534a5d6da1c0c69 903 Pfam PF01228 Glycine radical 784 883 5.0E-23 T 11-10-2018 IPR001150 Glycine radical domain GO:0003824 TF3313_0105 664a9313fff01a1d9534a5d6da1c0c69 903 SUPERFAMILY SSF51998 37 901 7.78E-152 T 11-10-2018 TF3313_0846 08f2959adb80f39bb7d95979d9b5e40b 339 SUPERFAMILY SSF55469 240 330 9.16E-12 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TF3313_0846 08f2959adb80f39bb7d95979d9b5e40b 339 Gene3D G3DSA:3.40.109.10 115 337 1.5E-45 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TF3313_0846 08f2959adb80f39bb7d95979d9b5e40b 339 Gene3D G3DSA:3.40.109.10 18 107 2.9E-24 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TF3313_0846 08f2959adb80f39bb7d95979d9b5e40b 339 Pfam PF00881 Nitroreductase family 188 320 1.4E-6 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 TF3313_0846 08f2959adb80f39bb7d95979d9b5e40b 339 SUPERFAMILY SSF55469 24 94 2.66E-7 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TF3313_2515 c2d0309586d8aa27bc6d435083a140fe 282 Pfam PF11738 Protein of unknown function (DUF3298) 187 265 3.0E-12 T 11-10-2018 IPR021729 Domain of unknown function DUF3298 TF3313_2515 c2d0309586d8aa27bc6d435083a140fe 282 Gene3D G3DSA:3.90.640.20 186 281 6.3E-23 T 11-10-2018 IPR037126 PdaC/RsiV-like superfamily TF3313_2515 c2d0309586d8aa27bc6d435083a140fe 282 Gene3D G3DSA:3.30.565.40 20 183 1.3E-39 T 11-10-2018 TF3313_0624 f08a84f0ac3b9c813ea98cfb366555d2 377 Pfam PF04024 PspC domain 114 172 1.6E-21 T 11-10-2018 IPR007168 Phage shock protein, PspC, N-terminal TF3313_1604 3afb02fceeb81c823ab556d66c1f8c29 402 Gene3D G3DSA:1.10.10.10 17 81 1.2E-10 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_1604 3afb02fceeb81c823ab556d66c1f8c29 402 Pfam PF13412 Winged helix-turn-helix DNA-binding 19 61 5.9E-9 T 11-10-2018 TF3313_1604 3afb02fceeb81c823ab556d66c1f8c29 402 Gene3D G3DSA:3.30.420.40 91 387 5.1E-83 T 11-10-2018 TF3313_1604 3afb02fceeb81c823ab556d66c1f8c29 402 Pfam PF00480 ROK family 88 395 6.2E-53 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 TF3313_1604 3afb02fceeb81c823ab556d66c1f8c29 402 Gene3D G3DSA:3.30.420.40 208 381 5.1E-83 T 11-10-2018 TF3313_1604 3afb02fceeb81c823ab556d66c1f8c29 402 SUPERFAMILY SSF53067 85 396 1.3E-48 T 11-10-2018 TF3313_1604 3afb02fceeb81c823ab556d66c1f8c29 402 SUPERFAMILY SSF46785 21 77 8.07E-9 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TF3313_1604 3afb02fceeb81c823ab556d66c1f8c29 402 ProSitePatterns PS01125 ROK family signature. 218 245 - T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 TF3313_2712 a2c22a705f89d99e0da07d6455e98b11 355 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 287 4.9E-80 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 TF3313_2712 a2c22a705f89d99e0da07d6455e98b11 355 SUPERFAMILY SSF51735 2 355 2.75E-61 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_2712 a2c22a705f89d99e0da07d6455e98b11 355 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 4 355 46.93 T 11-10-2018 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00051+1.1.1.271|KEGG: 00520+1.1.1.271|MetaCyc: PWY-66|Reactome: R-HSA-6787639 TF3313_2731 ca93c588dd63a594f9e70146fe85b169 850 SUPERFAMILY SSF48208 321 793 1.63E-89 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 TF3313_2731 ca93c588dd63a594f9e70146fe85b169 850 Pfam PF14498 Glycosyl hydrolase family 65, N-terminal domain 31 314 1.6E-59 T 11-10-2018 IPR027414 Glycosyl hydrolase family 95, N-terminal domain KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807 TF3313_2731 ca93c588dd63a594f9e70146fe85b169 850 PIRSF PIRSF007663 13 828 3.1E-255 T 11-10-2018 IPR016518 Alpha-L-fucosidase GO:0004560 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807 TF3313_0518 521c9ed1a8b2ad0cc42c51eff9efd337 441 SUPERFAMILY SSF52540 76 342 7.67E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0518 521c9ed1a8b2ad0cc42c51eff9efd337 441 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 37 72 1.4E-5 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TF3313_0518 521c9ed1a8b2ad0cc42c51eff9efd337 441 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 128 323 5.2E-42 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TF3313_0518 521c9ed1a8b2ad0cc42c51eff9efd337 441 Gene3D G3DSA:3.40.50.12240 23 441 1.2E-103 T 11-10-2018 TF3313_0667 dd589aa1075d38cb19a41ddd874b80d3 448 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 277 340 1.3E-15 T 11-10-2018 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain TF3313_0667 dd589aa1075d38cb19a41ddd874b80d3 448 Pfam PF04326 Putative DNA-binding domain 4 121 3.1E-14 T 11-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 TF3313_0667 dd589aa1075d38cb19a41ddd874b80d3 448 Gene3D G3DSA:3.30.950.30 1 126 2.4E-21 T 11-10-2018 IPR038461 Schlafen, AAA domain superfamily TF3313_0667 dd589aa1075d38cb19a41ddd874b80d3 448 Gene3D G3DSA:3.30.565.60 197 356 1.5E-32 T 11-10-2018 IPR038475 RecG, C-terminal domain superfamily TF3313_1515 193ba4fcb00a9a21d6bca919d863d7f8 283 PIRSF PIRSF005963 1 283 2.6E-123 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 TF3313_1515 193ba4fcb00a9a21d6bca919d863d7f8 283 SMART SM00729 53 259 3.1E-8 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TF3313_1515 193ba4fcb00a9a21d6bca919d863d7f8 283 SUPERFAMILY SSF102114 20 278 3.4E-55 T 11-10-2018 TF3313_1515 193ba4fcb00a9a21d6bca919d863d7f8 283 Gene3D G3DSA:3.20.20.70 54 261 1.1E-13 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_1515 193ba4fcb00a9a21d6bca919d863d7f8 283 Pfam PF04055 Radical SAM superfamily 62 217 3.0E-10 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TF3313_1515 193ba4fcb00a9a21d6bca919d863d7f8 283 TIGRFAM TIGR00510 lipA: lipoyl synthase 4 282 4.2E-102 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 TF3313_1515 193ba4fcb00a9a21d6bca919d863d7f8 283 Hamap MF_00206 Lipoyl synthase [lipA]. 1 283 132.036 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 TF3313_2349 1c144bc92e7d7216eb124716d586ddd7 589 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 2 580 2.8E-216 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 TF3313_2349 1c144bc92e7d7216eb124716d586ddd7 589 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 555 1.5E-103 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_2349 1c144bc92e7d7216eb124716d586ddd7 589 SUPERFAMILY SSF55681 116 581 6.43E-100 T 11-10-2018 TF3313_2349 1c144bc92e7d7216eb124716d586ddd7 589 Pfam PF01336 OB-fold nucleic acid binding domain 19 102 4.7E-17 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 TF3313_2349 1c144bc92e7d7216eb124716d586ddd7 589 Gene3D G3DSA:3.30.1360.30 274 417 5.0E-187 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 TF3313_2349 1c144bc92e7d7216eb124716d586ddd7 589 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 2 582 33.284 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 TF3313_2349 1c144bc92e7d7216eb124716d586ddd7 589 Gene3D G3DSA:2.40.50.140 1 104 1.0E-33 T 11-10-2018 TF3313_2349 1c144bc92e7d7216eb124716d586ddd7 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 472 488 2.5E-24 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_2349 1c144bc92e7d7216eb124716d586ddd7 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 209 222 2.5E-24 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_2349 1c144bc92e7d7216eb124716d586ddd7 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 516 530 2.5E-24 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_2349 1c144bc92e7d7216eb124716d586ddd7 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 192 204 2.5E-24 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TF3313_2349 1c144bc92e7d7216eb124716d586ddd7 589 Pfam PF02938 GAD domain 316 396 9.6E-14 T 11-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 TF3313_2349 1c144bc92e7d7216eb124716d586ddd7 589 Gene3D G3DSA:3.30.930.10 120 579 5.0E-187 T 11-10-2018 TF3313_2349 1c144bc92e7d7216eb124716d586ddd7 589 SUPERFAMILY SSF55261 291 416 1.11E-29 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 TF3313_2349 1c144bc92e7d7216eb124716d586ddd7 589 SUPERFAMILY SSF50249 2 109 1.24E-30 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TF3313_0265 3d5d1656c15908fe47963c43551bb729 379 Gene3D G3DSA:3.30.230.120 176 378 2.8E-15 T 11-10-2018 TF3313_0265 3d5d1656c15908fe47963c43551bb729 379 SUPERFAMILY SSF55060 280 371 1.75E-8 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily TF3313_0265 3d5d1656c15908fe47963c43551bb729 379 Pfam PF01467 Cytidylyltransferase-like 8 103 2.4E-13 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TF3313_0265 3d5d1656c15908fe47963c43551bb729 379 SUPERFAMILY SSF52374 3 136 2.22E-15 T 11-10-2018 TF3313_0265 3d5d1656c15908fe47963c43551bb729 379 Gene3D G3DSA:3.40.50.620 1 140 7.8E-25 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_0265 3d5d1656c15908fe47963c43551bb729 379 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 69 3.6E-14 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TF3313_1490 3e6b8ea8ef6566120b01388049058cb5 311 Gene3D G3DSA:2.40.30.30 188 310 3.3E-39 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 TF3313_1490 3e6b8ea8ef6566120b01388049058cb5 311 SMART SM00904 183 308 3.4E-49 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 TF3313_1490 3e6b8ea8ef6566120b01388049058cb5 311 SUPERFAMILY SSF52374 16 211 3.38E-26 T 11-10-2018 TF3313_1490 3e6b8ea8ef6566120b01388049058cb5 311 Gene3D G3DSA:3.40.50.620 4 186 1.8E-50 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_1490 3e6b8ea8ef6566120b01388049058cb5 311 Pfam PF01687 Riboflavin kinase 184 306 5.2E-33 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 TF3313_1490 3e6b8ea8ef6566120b01388049058cb5 311 Pfam PF06574 FAD synthetase 15 166 4.2E-42 T 11-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 TF3313_1490 3e6b8ea8ef6566120b01388049058cb5 311 SUPERFAMILY SSF82114 175 308 1.26E-42 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 TF3313_1490 3e6b8ea8ef6566120b01388049058cb5 311 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 307 1.5E-76 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 TF3313_1490 3e6b8ea8ef6566120b01388049058cb5 311 PIRSF PIRSF004491 1 311 2.5E-95 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 TF3313_0048 ea011904b3ed843bbe6f2cff3de8b524 91 TIGRFAM TIGR04149 GG_sam_targ_CFB: natural product precursor, GG-Bacteroidales family 14 58 1.4E-9 T 11-10-2018 IPR026408 Natural product precursor, GG-Bacteroidales TF3313_0412 175caf017ccb1024b9ee8f8c7dd2a234 450 PIRSF PIRSF006603 1 448 1.6E-84 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TF3313_0412 175caf017ccb1024b9ee8f8c7dd2a234 450 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 411 1.4E-58 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TF3313_0412 175caf017ccb1024b9ee8f8c7dd2a234 450 Pfam PF01554 MatE 23 183 1.8E-25 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TF3313_0412 175caf017ccb1024b9ee8f8c7dd2a234 450 Pfam PF01554 MatE 241 399 2.1E-20 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TF3313_0440 d368828ec1aee758219ae2b9e89add40 169 SUPERFAMILY SSF52540 4 169 1.89E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0440 d368828ec1aee758219ae2b9e89add40 169 PIRSF PIRSF006135 3 169 5.7E-52 T 11-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 TF3313_0440 d368828ec1aee758219ae2b9e89add40 169 Gene3D G3DSA:3.40.50.300 4 169 1.1E-50 T 11-10-2018 TF3313_0440 d368828ec1aee758219ae2b9e89add40 169 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 5 168 6.7E-53 T 11-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 TF3313_0736 3a7a29ebb9bcdd891189e9e6a5615d56 447 Pfam PF00884 Sulfatase 4 344 1.3E-62 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 TF3313_0736 3a7a29ebb9bcdd891189e9e6a5615d56 447 SUPERFAMILY SSF53649 2 435 4.51E-116 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 TF3313_0736 3a7a29ebb9bcdd891189e9e6a5615d56 447 Gene3D G3DSA:3.30.1120.10 365 444 1.2E-16 T 11-10-2018 TF3313_0736 3a7a29ebb9bcdd891189e9e6a5615d56 447 Pfam PF16347 Domain of unknown function (DUF4976) 350 427 3.6E-7 T 11-10-2018 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096|Reactome: R-HSA-2206307 TF3313_0736 3a7a29ebb9bcdd891189e9e6a5615d56 447 Gene3D G3DSA:3.40.720.10 2 364 7.1E-97 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 TF3313_0861 7cd8c466222bb6289a7f792c35c87e2d 514 Pfam PF08665 PglZ domain 227 420 3.4E-48 T 11-10-2018 IPR013973 PglZ domain TF3313_0861 7cd8c466222bb6289a7f792c35c87e2d 514 SMART SM00448 4 115 1.2E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TF3313_0861 7cd8c466222bb6289a7f792c35c87e2d 514 SUPERFAMILY SSF53649 228 513 1.57E-11 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 TF3313_0861 7cd8c466222bb6289a7f792c35c87e2d 514 Gene3D G3DSA:3.40.50.2300 1 130 1.8E-29 T 11-10-2018 TF3313_0861 7cd8c466222bb6289a7f792c35c87e2d 514 Pfam PF00072 Response regulator receiver domain 6 115 1.5E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TF3313_0861 7cd8c466222bb6289a7f792c35c87e2d 514 SUPERFAMILY SSF52172 1 121 2.42E-30 T 11-10-2018 IPR011006 CheY-like superfamily TF3313_0861 7cd8c466222bb6289a7f792c35c87e2d 514 Gene3D G3DSA:3.40.720.10 216 514 1.3E-6 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 TF3313_0509 1a38f7e9060e8b4d745c04d2b173de70 398 SUPERFAMILY SSF53756 6 391 1.36E-20 T 11-10-2018 TF3313_0509 1a38f7e9060e8b4d745c04d2b173de70 398 Gene3D G3DSA:3.40.50.2000 1 202 4.6E-7 T 11-10-2018 TF3313_0509 1a38f7e9060e8b4d745c04d2b173de70 398 Gene3D G3DSA:3.40.50.2000 203 371 9.5E-9 T 11-10-2018 TF3313_2867 dbab90c73d50e9c9562d0acbf2a0fe07 102 Gene3D G3DSA:2.70.70.10 1 102 2.8E-39 T 11-10-2018 IPR011055 Duplicated hybrid motif TF3313_2867 dbab90c73d50e9c9562d0acbf2a0fe07 102 SUPERFAMILY SSF51261 1 99 4.34E-41 T 11-10-2018 IPR011055 Duplicated hybrid motif TF3313_2867 dbab90c73d50e9c9562d0acbf2a0fe07 102 Pfam PF01551 Peptidase family M23 1 95 1.4E-30 T 11-10-2018 IPR016047 Peptidase M23 TF3313_0773 687875eda82c2f28b4c5a4b2c9e03e71 453 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 106 120 - T 11-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TF3313_0773 687875eda82c2f28b4c5a4b2c9e03e71 453 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 21 428 38.085 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TF3313_0773 687875eda82c2f28b4c5a4b2c9e03e71 453 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 78 415 9.3E-48 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme TF3313_0773 687875eda82c2f28b4c5a4b2c9e03e71 453 PIRSF PIRSF500824 1 437 4.8E-201 T 11-10-2018 IPR006316 Tryptophan synthase, beta chain-like GO:0000162|GO:0004834|GO:0030170 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TF3313_0773 687875eda82c2f28b4c5a4b2c9e03e71 453 TIGRFAM TIGR01415 trpB_rel: pyridoxal-phosphate dependent TrpB-like enzyme 13 429 1.2E-180 T 11-10-2018 IPR006316 Tryptophan synthase, beta chain-like GO:0000162|GO:0004834|GO:0030170 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TF3313_0773 687875eda82c2f28b4c5a4b2c9e03e71 453 Gene3D G3DSA:3.40.50.1100 13 421 5.2E-164 T 11-10-2018 TF3313_0773 687875eda82c2f28b4c5a4b2c9e03e71 453 SUPERFAMILY SSF53686 33 425 4.32E-105 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme TF3313_0773 687875eda82c2f28b4c5a4b2c9e03e71 453 PIRSF PIRSF001413 9 434 7.5E-112 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TF3313_0773 687875eda82c2f28b4c5a4b2c9e03e71 453 Gene3D G3DSA:3.40.50.1100 14 239 5.2E-164 T 11-10-2018 TF3313_0243 2e05a8f5a944d84579518f2cfb1cdabe 51 Pfam PF14128 Domain of unknown function (DUF4295) 2 49 1.3E-26 T 11-10-2018 IPR025379 Protein of unknown function DUF4295 TF3313_2240 6d02f9e984a66ed3fe895e0685536d6a 317 Gene3D G3DSA:3.40.630.30 87 296 5.4E-16 T 11-10-2018 TF3313_2240 6d02f9e984a66ed3fe895e0685536d6a 317 SUPERFAMILY SSF55729 142 298 6.89E-20 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TF3313_2240 6d02f9e984a66ed3fe895e0685536d6a 317 Pfam PF13480 Acetyltransferase (GNAT) domain 147 278 3.1E-10 T 11-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 TF3313_2316 e4ee17085a31067bb4ae45bd66030eb9 230 Pfam PF13568 Outer membrane protein beta-barrel domain 23 203 2.2E-29 T 11-10-2018 IPR025665 Outer membrane protein beta-barrel domain TF3313_2801 62c7cc9041850e492169b508be39959b 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 183 9.3E-11 T 11-10-2018 TF3313_2801 62c7cc9041850e492169b508be39959b 215 Gene3D G3DSA:1.10.150.520 17 89 4.9E-20 T 11-10-2018 TF3313_2801 62c7cc9041850e492169b508be39959b 215 Gene3D G3DSA:3.40.50.1000 5 205 4.9E-20 T 11-10-2018 IPR023214 HAD superfamily TF3313_2801 62c7cc9041850e492169b508be39959b 215 SUPERFAMILY SSF56784 4 211 5.11E-21 T 11-10-2018 IPR036412 HAD-like superfamily TF3313_2801 62c7cc9041850e492169b508be39959b 215 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 75 179 1.5E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TF3313_0222 169c710c3e83f4684a3cd033512dd2e7 268 Gene3D G3DSA:3.20.20.70 3 267 4.4E-98 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_0222 169c710c3e83f4684a3cd033512dd2e7 268 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 11 265 2.1E-118 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 TF3313_0222 169c710c3e83f4684a3cd033512dd2e7 268 Pfam PF00793 DAHP synthetase I family 10 264 1.6E-60 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 TF3313_0222 169c710c3e83f4684a3cd033512dd2e7 268 SUPERFAMILY SSF51569 7 266 2.56E-98 T 11-10-2018 TF3313_2266 33f991fd54ecb4ae91d581c049f8255b 367 Pfam PF12706 Beta-lactamase superfamily domain 123 316 6.1E-33 T 11-10-2018 IPR001279 Metallo-beta-lactamase TF3313_2266 33f991fd54ecb4ae91d581c049f8255b 367 PIRSF PIRSF038896 25 359 1.6E-71 T 11-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 TF3313_2266 33f991fd54ecb4ae91d581c049f8255b 367 SUPERFAMILY SSF56281 107 354 3.28E-30 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TF3313_2266 33f991fd54ecb4ae91d581c049f8255b 367 Gene3D G3DSA:3.60.15.10 44 348 5.1E-64 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TF3313_0845 7aff3f6faa2e42301a8f63692bc00f64 197 Gene3D G3DSA:1.10.357.10 2 171 2.6E-17 T 11-10-2018 TF3313_0845 7aff3f6faa2e42301a8f63692bc00f64 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.1E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TF3313_0845 7aff3f6faa2e42301a8f63692bc00f64 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.1E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TF3313_0845 7aff3f6faa2e42301a8f63692bc00f64 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 53 6.7E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TF3313_0845 7aff3f6faa2e42301a8f63692bc00f64 197 SUPERFAMILY SSF46689 3 59 3.4E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TF3313_2910 b5aab9a8b463f02f87938e5ae4e3a04f 111 Gene3D G3DSA:1.20.120.20 27 110 1.8E-7 T 11-10-2018 TF3313_2910 b5aab9a8b463f02f87938e5ae4e3a04f 111 SUPERFAMILY SSF58113 35 104 3.4E-5 T 11-10-2018 TF3313_2910 b5aab9a8b463f02f87938e5ae4e3a04f 111 Pfam PF12732 YtxH-like protein 10 78 7.3E-17 T 11-10-2018 IPR024623 Uncharacterised protein family YtxH TF3313_2929 93250223f036564d06b00fc16f3243e6 528 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 242 251 6.0E-8 T 11-10-2018 TF3313_2929 93250223f036564d06b00fc16f3243e6 528 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 84 106 6.0E-8 T 11-10-2018 TF3313_2929 93250223f036564d06b00fc16f3243e6 528 PIRSF PIRSF038984 2 528 5.9E-199 T 11-10-2018 IPR028348 FAD dependent protein TF3313_2929 93250223f036564d06b00fc16f3243e6 528 SUPERFAMILY SSF51905 85 526 1.92E-32 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TF3313_2929 93250223f036564d06b00fc16f3243e6 528 Pfam PF03486 HI0933-like protein 85 247 1.3E-5 T 11-10-2018 TF3313_2929 93250223f036564d06b00fc16f3243e6 528 Gene3D G3DSA:3.50.50.60 466 527 6.5E-14 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TF3313_2929 93250223f036564d06b00fc16f3243e6 528 Gene3D G3DSA:3.50.50.60 73 284 4.5E-73 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TF3313_0824 c1d43b8cd30e69bd1ea89a28f516b557 595 SUPERFAMILY SSF53474 339 425 1.45E-10 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TF3313_0824 c1d43b8cd30e69bd1ea89a28f516b557 595 Gene3D G3DSA:3.40.50.1820 331 513 5.6E-12 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TF3313_0824 c1d43b8cd30e69bd1ea89a28f516b557 595 Pfam PF05057 Putative serine esterase (DUF676) 358 472 5.7E-7 T 11-10-2018 IPR007751 Domain of unknown function DUF676, lipase-like TF3313_0620 b549f67b10271b6542b9563592aba77e 345 Pfam PF00535 Glycosyl transferase family 2 5 116 2.4E-21 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TF3313_0620 b549f67b10271b6542b9563592aba77e 345 SUPERFAMILY SSF53448 1 273 2.63E-54 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_0620 b549f67b10271b6542b9563592aba77e 345 Gene3D G3DSA:3.90.550.10 1 227 2.6E-46 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_1477 d91cf2faf687a01c0e8ac4a8eb033d10 217 Pfam PF13649 Methyltransferase domain 55 150 1.7E-21 T 11-10-2018 TF3313_1477 d91cf2faf687a01c0e8ac4a8eb033d10 217 SUPERFAMILY SSF53335 3 196 4.93E-37 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_1477 d91cf2faf687a01c0e8ac4a8eb033d10 217 Gene3D G3DSA:3.40.50.150 2 217 4.5E-34 T 11-10-2018 TF3313_1197 ba184a804a3afd74ebcd3cdec90f81e9 302 Pfam PF11306 Protein of unknown function (DUF3108) 41 282 1.4E-37 T 11-10-2018 IPR021457 Protein of unknown function DUF3108 TF3313_1055 cff00fbb2782756dbbd40f82268c19af 89 Pfam PF00515 Tetratricopeptide repeat 34 65 1.3E-7 T 11-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 TF3313_1055 cff00fbb2782756dbbd40f82268c19af 89 SUPERFAMILY SSF48452 10 73 3.16E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1055 cff00fbb2782756dbbd40f82268c19af 89 SMART SM00028 33 66 6.4E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1055 cff00fbb2782756dbbd40f82268c19af 89 Gene3D G3DSA:1.25.40.10 1 89 1.2E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1691 bdb1480c7d26e6b96213fcfb109113d3 340 Gene3D G3DSA:3.90.1150.10 20 331 1.6E-85 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TF3313_1691 bdb1480c7d26e6b96213fcfb109113d3 340 Pfam PF00155 Aminotransferase class I and II 42 331 5.1E-28 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TF3313_1691 bdb1480c7d26e6b96213fcfb109113d3 340 Gene3D G3DSA:3.40.640.10 29 238 1.6E-85 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TF3313_1691 bdb1480c7d26e6b96213fcfb109113d3 340 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 190 203 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 TF3313_1691 bdb1480c7d26e6b96213fcfb109113d3 340 SUPERFAMILY SSF53383 19 334 7.87E-60 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TF3313_0283 afbe2ba4a806c0cad64b9d893b96818a 85 Gene3D G3DSA:3.30.160.60 3 66 3.5E-6 T 11-10-2018 TF3313_0283 afbe2ba4a806c0cad64b9d893b96818a 85 Pfam PF13912 C2H2-type zinc finger 49 63 0.017 T 11-10-2018 TF3313_2558 895ec5ffc2f321b40b704f2e0c75f111 328 Gene3D G3DSA:3.20.20.150 39 318 1.4E-55 T 11-10-2018 TF3313_2558 895ec5ffc2f321b40b704f2e0c75f111 328 SUPERFAMILY SSF51658 39 319 7.32E-43 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily TF3313_2558 895ec5ffc2f321b40b704f2e0c75f111 328 Pfam PF01261 Xylose isomerase-like TIM barrel 72 247 8.3E-25 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain TF3313_2461 cc970298614f881d59cf497c1da6ec63 471 Gene3D G3DSA:3.20.20.80 64 394 8.8E-10 T 11-10-2018 TF3313_2461 cc970298614f881d59cf497c1da6ec63 471 Pfam PF02638 Glycosyl hydrolase-like 10 56 338 3.2E-17 T 11-10-2018 IPR003790 Glycosyl hydrolase-like 10 TF3313_2461 cc970298614f881d59cf497c1da6ec63 471 SUPERFAMILY SSF51445 60 449 1.87E-14 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily TF3313_2461 cc970298614f881d59cf497c1da6ec63 471 Pfam PF16373 Domain of unknown function 345 460 1.3E-37 T 11-10-2018 IPR032280 Domain of unknown function DUF4985 TF3313_2901 7e3d329df589f2de0d8e2a5bec24fd14 194 SMART SM00563 28 140 1.4E-19 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TF3313_2901 7e3d329df589f2de0d8e2a5bec24fd14 194 Pfam PF01553 Acyltransferase 27 132 1.6E-13 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TF3313_2901 7e3d329df589f2de0d8e2a5bec24fd14 194 SUPERFAMILY SSF69593 8 134 1.07E-16 T 11-10-2018 TF3313_1740 f37d07da4fe5fb24bb995514841bdb1f 2482 TIGRFAM TIGR04189 surface_SprA: cell surface protein SprA 64 2480 0.0 T 11-10-2018 IPR026377 Cell surface SprA TF3313_1740 f37d07da4fe5fb24bb995514841bdb1f 2482 Pfam PF14349 Motility related/secretion protein 1080 1614 1.1E-199 T 11-10-2018 IPR025684 Gliding motility protein SprA N-terminal domain TF3313_1740 f37d07da4fe5fb24bb995514841bdb1f 2482 Pfam PF14349 Motility related/secretion protein 75 356 5.9E-22 T 11-10-2018 IPR025684 Gliding motility protein SprA N-terminal domain TF3313_2723 7cfda600c5d2d7729779e0f646793e19 347 SUPERFAMILY SSF64182 22 307 2.88E-51 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily TF3313_2723 7cfda600c5d2d7729779e0f646793e19 347 Gene3D G3DSA:3.90.1640.10 1 216 5.1E-69 T 11-10-2018 TF3313_2723 7cfda600c5d2d7729779e0f646793e19 347 Gene3D G3DSA:3.10.310.30 217 341 7.6E-41 T 11-10-2018 TF3313_2723 7cfda600c5d2d7729779e0f646793e19 347 Pfam PF01368 DHH family 24 175 1.8E-13 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TF3313_2630 75f49fc7b57c3bc506ce353e1c7afd23 173 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 171 1.2E-27 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TF3313_2630 75f49fc7b57c3bc506ce353e1c7afd23 173 Gene3D G3DSA:1.10.1740.10 1 113 1.4E-26 T 11-10-2018 TF3313_2630 75f49fc7b57c3bc506ce353e1c7afd23 173 Gene3D G3DSA:1.10.10.10 114 173 1.4E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_2630 75f49fc7b57c3bc506ce353e1c7afd23 173 Pfam PF04542 Sigma-70 region 2 21 87 8.7E-12 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_2630 75f49fc7b57c3bc506ce353e1c7afd23 173 SUPERFAMILY SSF88946 1 100 3.14E-23 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_2630 75f49fc7b57c3bc506ce353e1c7afd23 173 SUPERFAMILY SSF88659 106 172 1.02E-12 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TF3313_2630 75f49fc7b57c3bc506ce353e1c7afd23 173 Pfam PF08281 Sigma-70, region 4 117 168 3.2E-14 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TF3313_1245 8f87ac20ebf0ea12220ef9832894298a 187 Gene3D G3DSA:1.50.10.100 19 170 1.2E-32 T 11-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 TF3313_1245 8f87ac20ebf0ea12220ef9832894298a 187 SUPERFAMILY SSF48230 92 165 3.75E-14 T 11-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 TF3313_2120 b75c504932921d5986f9e58cd3b9f48c 643 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 7 635 26.754 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 TF3313_2120 b75c504932921d5986f9e58cd3b9f48c 643 Gene3D G3DSA:1.10.10.1140 543 643 3.3E-46 T 11-10-2018 TF3313_2120 b75c504932921d5986f9e58cd3b9f48c 643 Pfam PF02540 NAD synthase 338 506 2.2E-29 T 11-10-2018 IPR022310 NAD/GMP synthase TF3313_2120 b75c504932921d5986f9e58cd3b9f48c 643 Pfam PF00795 Carbon-nitrogen hydrolase 10 270 4.4E-17 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 TF3313_2120 b75c504932921d5986f9e58cd3b9f48c 643 PIRSF PIRSF006630 4 637 6.0E-143 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 TF3313_2120 b75c504932921d5986f9e58cd3b9f48c 643 SUPERFAMILY SSF52402 315 617 1.33E-70 T 11-10-2018 TF3313_2120 b75c504932921d5986f9e58cd3b9f48c 643 TIGRFAM TIGR00552 nadE: NAD+ synthetase 340 506 3.7E-25 T 11-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 TF3313_2120 b75c504932921d5986f9e58cd3b9f48c 643 SUPERFAMILY SSF56317 5 277 8.89E-45 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TF3313_2120 b75c504932921d5986f9e58cd3b9f48c 643 Gene3D G3DSA:3.60.110.10 1 290 1.4E-74 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TF3313_2120 b75c504932921d5986f9e58cd3b9f48c 643 Gene3D G3DSA:3.40.50.620 313 527 2.4E-64 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_1173 70b385208008afe26fd5cc2fdd5e986e 616 Gene3D G3DSA:2.160.20.10 363 612 2.7E-9 T 11-10-2018 IPR012334 Pectin lyase fold TF3313_1173 70b385208008afe26fd5cc2fdd5e986e 616 SUPERFAMILY SSF51126 5 580 2.0E-34 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor TF3313_1173 70b385208008afe26fd5cc2fdd5e986e 616 Gene3D G3DSA:2.160.20.10 200 349 1.5E-5 T 11-10-2018 IPR012334 Pectin lyase fold TF3313_2760 015d2c59c99c485c3e64f292ca216d1f 437 Gene3D G3DSA:2.60.120.560 33 254 1.8E-77 T 11-10-2018 TF3313_2760 015d2c59c99c485c3e64f292ca216d1f 437 Pfam PF06439 Domain of Unknown Function (DUF1080) 51 252 1.7E-45 T 11-10-2018 IPR010496 Domain of unknown function DUF1080 TF3313_2760 015d2c59c99c485c3e64f292ca216d1f 437 Pfam PF06439 Domain of Unknown Function (DUF1080) 261 435 1.1E-36 T 11-10-2018 IPR010496 Domain of unknown function DUF1080 TF3313_2760 015d2c59c99c485c3e64f292ca216d1f 437 Gene3D G3DSA:2.60.120.560 261 437 1.0E-46 T 11-10-2018 TF3313_1517 42e0c574403d9171758c93b5e2f8ced1 174 Gene3D G3DSA:3.60.21.10 11 162 3.5E-27 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like TF3313_1517 42e0c574403d9171758c93b5e2f8ced1 174 SUPERFAMILY SSF56300 11 170 5.35E-29 T 11-10-2018 TF3313_1517 42e0c574403d9171758c93b5e2f8ced1 174 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 14 154 4.6E-22 T 11-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 TF3313_1724 c2bbb90cd0950200427bd6503677bd48 180 SUPERFAMILY SSF75217 10 175 5.04E-41 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases TF3313_1724 c2bbb90cd0950200427bd6503677bd48 180 Gene3D G3DSA:3.40.1280.10 5 179 8.0E-51 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TF3313_1724 c2bbb90cd0950200427bd6503677bd48 180 Pfam PF00588 SpoU rRNA Methylase family 25 168 1.0E-33 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 TF3313_0268 09f32dec00cd9bbd7b0202e63c40ed15 380 Pfam PF00691 OmpA family 280 368 3.2E-14 T 11-10-2018 IPR006665 OmpA-like domain TF3313_0268 09f32dec00cd9bbd7b0202e63c40ed15 380 ProSitePatterns PS01068 OmpA-like domain. 312 358 - T 11-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 TF3313_0268 09f32dec00cd9bbd7b0202e63c40ed15 380 SUPERFAMILY SSF103088 273 369 5.1E-17 T 11-10-2018 IPR036737 OmpA-like domain superfamily TF3313_0268 09f32dec00cd9bbd7b0202e63c40ed15 380 Gene3D G3DSA:3.30.1330.60 257 379 2.6E-17 T 11-10-2018 IPR036737 OmpA-like domain superfamily TF3313_1961 196818139a889918deab4986421e28c6 205 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 205 27.97 T 11-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 TF3313_1961 196818139a889918deab4986421e28c6 205 PIRSF PIRSF006102 1 205 5.9E-60 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 TF3313_1961 196818139a889918deab4986421e28c6 205 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 3 203 1.1E-94 T 11-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 TF3313_1961 196818139a889918deab4986421e28c6 205 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 203 1.0E-59 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 TF3313_0704 792339696a95ec3113976c228608f50a 1197 Pfam PF17517 IgGFc binding protein 128 470 1.7E-27 T 11-10-2018 IPR035234 IgGFc-binding protein, N-terminal TF3313_0704 792339696a95ec3113976c228608f50a 1197 SMART SM00710 774 799 1900.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat TF3313_0704 792339696a95ec3113976c228608f50a 1197 SMART SM00710 867 887 9000.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat TF3313_0704 792339696a95ec3113976c228608f50a 1197 SMART SM00710 836 862 1600.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat TF3313_0704 792339696a95ec3113976c228608f50a 1197 SMART SM00710 805 826 25.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat TF3313_0704 792339696a95ec3113976c228608f50a 1197 SUPERFAMILY SSF51126 667 1025 4.57E-26 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor TF3313_0704 792339696a95ec3113976c228608f50a 1197 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 1146 1196 9.3E-6 T 11-10-2018 IPR026444 Secretion system C-terminal sorting domain TF3313_0634 c8f69ad5fd6349fa187fc43c77af1e6a 164 Pfam PF00430 ATP synthase B/B' CF(0) 11 140 3.5E-25 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 TF3313_0634 c8f69ad5fd6349fa187fc43c77af1e6a 164 Hamap MF_01398 ATP synthase subunit b [atpF]. 3 142 12.433 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 TF3313_0634 c8f69ad5fd6349fa187fc43c77af1e6a 164 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 15 159 1.1E-27 T 11-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 TF3313_0634 c8f69ad5fd6349fa187fc43c77af1e6a 164 SUPERFAMILY SSF81573 68 125 1.19E-7 T 11-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily TF3313_2113 1dc16e6aed00794f7f1f8dc9f5091eef 221 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 218 1.3E-50 T 11-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 TF3313_2113 1dc16e6aed00794f7f1f8dc9f5091eef 221 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 218 3.2E-60 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 TF3313_2113 1dc16e6aed00794f7f1f8dc9f5091eef 221 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 2 219 40.593 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 TF3313_2113 1dc16e6aed00794f7f1f8dc9f5091eef 221 SUPERFAMILY SSF53448 4 218 5.63E-55 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_2113 1dc16e6aed00794f7f1f8dc9f5091eef 221 Gene3D G3DSA:3.90.550.10 2 221 3.9E-69 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_1616 9c60619cd8ea7af027ba8aaa18a63a33 270 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 267 16.089 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 TF3313_1616 9c60619cd8ea7af027ba8aaa18a63a33 270 Pfam PF02673 Bacitracin resistance protein BacA 6 261 7.4E-70 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 TF3313_2903 f00c6c29773bb4b8e60b88f659c16779 551 Gene3D G3DSA:3.40.50.2000 11 541 2.4E-192 T 11-10-2018 TF3313_2903 f00c6c29773bb4b8e60b88f659c16779 551 SUPERFAMILY SSF53756 17 332 8.63E-19 T 11-10-2018 TF3313_2903 f00c6c29773bb4b8e60b88f659c16779 551 Gene3D G3DSA:3.40.50.2000 262 526 2.4E-192 T 11-10-2018 TF3313_2903 f00c6c29773bb4b8e60b88f659c16779 551 Pfam PF05693 Glycogen synthase 14 344 5.9E-58 T 11-10-2018 IPR008631 Glycogen synthase GO:0004373|GO:0005978 KEGG: 00500+2.4.1.11|MetaCyc: PWY-5067|Reactome: R-HSA-3322077|Reactome: R-HSA-3785653 TF3313_2903 f00c6c29773bb4b8e60b88f659c16779 551 Pfam PF05693 Glycogen synthase 370 545 6.6E-33 T 11-10-2018 IPR008631 Glycogen synthase GO:0004373|GO:0005978 KEGG: 00500+2.4.1.11|MetaCyc: PWY-5067|Reactome: R-HSA-3322077|Reactome: R-HSA-3785653 TF3313_2903 f00c6c29773bb4b8e60b88f659c16779 551 SUPERFAMILY SSF53756 421 538 4.19E-13 T 11-10-2018 TF3313_1659 0e911514c7211bfc72c4143bc37c4d07 377 Gene3D G3DSA:3.40.640.10 46 285 9.2E-116 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TF3313_1659 0e911514c7211bfc72c4143bc37c4d07 377 Gene3D G3DSA:3.90.1150.10 13 366 9.2E-116 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TF3313_1659 0e911514c7211bfc72c4143bc37c4d07 377 Pfam PF00202 Aminotransferase class-III 8 372 8.4E-93 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TF3313_1659 0e911514c7211bfc72c4143bc37c4d07 377 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 205 242 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TF3313_1659 0e911514c7211bfc72c4143bc37c4d07 377 PIRSF PIRSF000521 8 115 2.2E-6 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TF3313_1659 0e911514c7211bfc72c4143bc37c4d07 377 PIRSF PIRSF000521 139 375 9.7E-37 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TF3313_1659 0e911514c7211bfc72c4143bc37c4d07 377 PIRSF PIRSF000521 110 149 0.89 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TF3313_1659 0e911514c7211bfc72c4143bc37c4d07 377 SUPERFAMILY SSF53383 4 374 5.91E-105 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TF3313_2219 736b9aa6929f19db9dfce58ddd06cee8 392 SUPERFAMILY SSF51556 56 360 5.05E-68 T 11-10-2018 IPR032466 Metal-dependent hydrolase TF3313_2219 736b9aa6929f19db9dfce58ddd06cee8 392 Pfam PF01979 Amidohydrolase family 53 387 3.3E-20 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 TF3313_2219 736b9aa6929f19db9dfce58ddd06cee8 392 Gene3D G3DSA:3.20.20.140 56 360 9.4E-114 T 11-10-2018 TF3313_2219 736b9aa6929f19db9dfce58ddd06cee8 392 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 4 386 6.7E-80 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 TF3313_2219 736b9aa6929f19db9dfce58ddd06cee8 392 PIRSF PIRSF038994 1 390 5.8E-98 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 TF3313_2219 736b9aa6929f19db9dfce58ddd06cee8 392 Gene3D G3DSA:2.30.40.10 10 386 9.4E-114 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TF3313_2219 736b9aa6929f19db9dfce58ddd06cee8 392 SUPERFAMILY SSF51338 1 388 3.01E-16 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TF3313_0944 1c62d860e542467d9c1fdb8e59da4b4c 506 Pfam PF14134 Domain of unknown function (DUF4301) 4 506 3.0E-228 T 11-10-2018 IPR025393 Domain of unknown function DUF4301 TF3313_0944 1c62d860e542467d9c1fdb8e59da4b4c 506 SUPERFAMILY SSF53448 156 504 2.14E-13 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_1853 0f13b7cd89e2dc8ac2bf21975252a21d 590 SUPERFAMILY SSF48452 19 590 3.29E-116 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1853 0f13b7cd89e2dc8ac2bf21975252a21d 590 Pfam PF14322 Starch-binding associating with outer membrane 25 231 9.4E-19 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_1853 0f13b7cd89e2dc8ac2bf21975252a21d 590 Pfam PF07980 SusD family 333 590 6.0E-56 T 11-10-2018 IPR012944 RagB/SusD domain TF3313_1853 0f13b7cd89e2dc8ac2bf21975252a21d 590 Gene3D G3DSA:1.25.40.390 28 590 5.7E-126 T 11-10-2018 TF3313_1981 ac77d3de4216cf1b0717286859052193 466 PIRSF PIRSF004548 32 466 1.3E-139 T 11-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD TF3313_1981 ac77d3de4216cf1b0717286859052193 466 Pfam PF06123 Inner membrane protein CreD 38 463 1.2E-158 T 11-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD TF3313_2255 aaa7ffbc6e361d9e3fb4bb9cb21ba212 69 Pfam PF14568 SMI1-KNR4 cell-wall 19 50 1.2E-7 T 11-10-2018 TF3313_2255 aaa7ffbc6e361d9e3fb4bb9cb21ba212 69 SUPERFAMILY SSF160631 16 55 1.06E-7 T 11-10-2018 TF3313_2255 aaa7ffbc6e361d9e3fb4bb9cb21ba212 69 Gene3D G3DSA:3.40.1580.10 8 69 2.2E-8 T 11-10-2018 IPR037883 Knr4/Smi1-like domain superfamily TF3313_1642 812d6032244cc0a77c44a0b060786e70 516 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 12 512 1.5E-174 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 TF3313_1642 812d6032244cc0a77c44a0b060786e70 516 PIRSF PIRSF006446 5 345 6.6E-101 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 TF3313_1642 812d6032244cc0a77c44a0b060786e70 516 PIRSF PIRSF006446 380 516 7.5E-38 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 TF3313_0896 0e754e64c1d2fd2e5f84da1218b3c558 247 Pfam PF01618 MotA/TolQ/ExbB proton channel family 109 228 6.1E-27 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel TF3313_1191 17d7f967fa24ab4992033051c5bcc83b 370 TIGRFAM TIGR03523 GldN: gliding motility associated protein GldN 8 299 1.5E-60 T 11-10-2018 IPR019847 Gliding motility associated protein GldN TF3313_0657 51acbbac88b72c0ad7403bd2a4df4151 401 Pfam PF05272 Virulence-associated protein E 119 290 1.6E-25 T 11-10-2018 IPR007936 Virulence-associated E TF3313_0889 010a94ab1f863c6947204d8d8fb55d0b 288 Gene3D G3DSA:3.40.1010.20 97 200 2.7E-81 T 11-10-2018 TF3313_0889 010a94ab1f863c6947204d8d8fb55d0b 288 Gene3D G3DSA:3.40.50.11270 13 96 2.7E-81 T 11-10-2018 TF3313_0889 010a94ab1f863c6947204d8d8fb55d0b 288 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 8 284 5.4E-61 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 TF3313_0889 010a94ab1f863c6947204d8d8fb55d0b 288 Gene3D G3DSA:3.40.1010.20 6 280 2.7E-81 T 11-10-2018 TF3313_0889 010a94ab1f863c6947204d8d8fb55d0b 288 Pfam PF02401 LytB protein 5 283 3.1E-77 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 TF3313_0889 010a94ab1f863c6947204d8d8fb55d0b 288 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 2 287 27.876 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 TF3313_2158 2d7e7ba71a6f7cc9e325217e5164bcd0 163 Gene3D G3DSA:3.40.50.620 2 152 4.4E-28 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_2158 2d7e7ba71a6f7cc9e325217e5164bcd0 163 SUPERFAMILY SSF52402 5 132 2.29E-21 T 11-10-2018 TF3313_2158 2d7e7ba71a6f7cc9e325217e5164bcd0 163 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 10 132 1.2E-16 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 TF3313_2838 2d7e7ba71a6f7cc9e325217e5164bcd0 163 Gene3D G3DSA:3.40.50.620 2 152 4.4E-28 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_2838 2d7e7ba71a6f7cc9e325217e5164bcd0 163 SUPERFAMILY SSF52402 5 132 2.29E-21 T 11-10-2018 TF3313_2838 2d7e7ba71a6f7cc9e325217e5164bcd0 163 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 10 132 1.2E-16 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 TF3313_1982 9c2311edc0e9704cc69f853b8837f787 104 Gene3D G3DSA:1.10.10.10 6 98 2.3E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_1982 9c2311edc0e9704cc69f853b8837f787 104 SUPERFAMILY SSF46785 13 100 1.42E-10 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TF3313_1982 9c2311edc0e9704cc69f853b8837f787 104 Pfam PF13601 Winged helix DNA-binding domain 16 95 1.0E-29 T 11-10-2018 IPR027395 Winged helix DNA-binding domain TF3313_1286 87c8878d85ab2ad39ce1dcc41cd533ba 514 SUPERFAMILY SSF48452 25 514 1.9E-83 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1286 87c8878d85ab2ad39ce1dcc41cd533ba 514 Pfam PF14322 Starch-binding associating with outer membrane 125 239 1.5E-6 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_1286 87c8878d85ab2ad39ce1dcc41cd533ba 514 Pfam PF07980 SusD family 286 514 4.3E-28 T 11-10-2018 IPR012944 RagB/SusD domain TF3313_1286 87c8878d85ab2ad39ce1dcc41cd533ba 514 Gene3D G3DSA:1.25.40.390 35 514 5.1E-81 T 11-10-2018 TF3313_1385 3e0defaea2df304ab19203bccd007525 199 SUPERFAMILY SSF55469 1 197 4.6E-26 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TF3313_1385 3e0defaea2df304ab19203bccd007525 199 Pfam PF00881 Nitroreductase family 1 176 2.7E-18 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 TF3313_1475 9fbe8dcd9d319de6558d7b748af98e20 263 Gene3D G3DSA:3.40.50.150 68 248 1.7E-29 T 11-10-2018 TF3313_1475 9fbe8dcd9d319de6558d7b748af98e20 263 SUPERFAMILY SSF53335 78 233 4.56E-29 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_1475 9fbe8dcd9d319de6558d7b748af98e20 263 Pfam PF08241 Methyltransferase domain 97 203 2.4E-18 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 TF3313_1065 f38693bccec402175491d58dea0b0840 773 Pfam PF13715 CarboxypepD_reg-like domain 26 114 2.6E-10 T 11-10-2018 TF3313_1065 f38693bccec402175491d58dea0b0840 773 SUPERFAMILY SSF56935 110 755 2.38E-28 T 11-10-2018 TF3313_1065 f38693bccec402175491d58dea0b0840 773 Gene3D G3DSA:2.40.170.20 226 618 1.2E-11 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_1065 f38693bccec402175491d58dea0b0840 773 SUPERFAMILY SSF49464 24 112 2.94E-10 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_1065 f38693bccec402175491d58dea0b0840 773 Pfam PF14905 Outer membrane protein beta-barrel family 375 753 4.0E-32 T 11-10-2018 TF3313_0173 2332d7b8b7180720a98ded19a5a8a00f 790 Pfam PF03787 RAMP superfamily 43 494 1.8E-19 T 11-10-2018 IPR005537 CRISPR type III-associated RAMP protein TF3313_0173 2332d7b8b7180720a98ded19a5a8a00f 790 TIGRFAM TIGR03986 TIGR03986: CRISPR-associated protein 7 514 2.2E-88 T 11-10-2018 IPR023825 CRISPR-associated RAMP BGP1436 TF3313_0064 e89bcb9b223d60a25ba75888bfed9442 277 SUPERFAMILY SSF90123 163 267 9.94E-20 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TF3313_0064 e89bcb9b223d60a25ba75888bfed9442 277 Gene3D G3DSA:3.90.70.10 1 149 3.3E-45 T 11-10-2018 TF3313_0064 e89bcb9b223d60a25ba75888bfed9442 277 Pfam PF00664 ABC transporter transmembrane region 180 267 2.1E-9 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TF3313_0064 e89bcb9b223d60a25ba75888bfed9442 277 Pfam PF03412 Peptidase C39 family 8 126 5.4E-32 T 11-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 TF3313_0064 e89bcb9b223d60a25ba75888bfed9442 277 Gene3D G3DSA:1.20.1560.10 150 272 7.5E-21 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TF3313_2004 ad5755baa94dcf573f167d3905d097b5 422 Pfam PF13173 AAA domain 40 162 2.9E-33 T 11-10-2018 TF3313_2004 ad5755baa94dcf573f167d3905d097b5 422 SUPERFAMILY SSF52540 38 220 2.43E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2004 ad5755baa94dcf573f167d3905d097b5 422 Pfam PF13635 Domain of unknown function (DUF4143) 217 357 7.6E-12 T 11-10-2018 IPR025420 Domain of unknown function DUF4143 TF3313_2545 3aae7b2e0c61ea5dc2f4d0477e34f17f 153 Gene3D G3DSA:3.90.1570.30 24 152 2.4E-7 T 11-10-2018 TF3313_2545 3aae7b2e0c61ea5dc2f4d0477e34f17f 153 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 35 144 2.3E-37 T 11-10-2018 IPR029464 Type I restriction enzyme R protein, N-terminal domain TF3313_1494 7c0d6b70927bd0d148cfc0781e1245a0 370 Gene3D G3DSA:2.60.40.1080 117 205 5.3E-9 T 11-10-2018 TF3313_1494 7c0d6b70927bd0d148cfc0781e1245a0 370 Gene3D G3DSA:2.60.40.1080 206 295 6.2E-10 T 11-10-2018 TF3313_2505 194c7fa1453efbd4d4ddb0e253477f49 606 SUPERFAMILY SSF49373 434 532 1.02E-11 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments TF3313_2505 194c7fa1453efbd4d4ddb0e253477f49 606 Gene3D G3DSA:2.60.40.10 221 323 8.4E-12 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_2505 194c7fa1453efbd4d4ddb0e253477f49 606 Pfam PF13004 Putative binding domain, N-terminal 163 214 2.1E-6 T 11-10-2018 IPR024361 Bacteroidetes-Associated Carbohydrate-binding Often N-terminal MetaCyc: PWY-6807 TF3313_2505 194c7fa1453efbd4d4ddb0e253477f49 606 Pfam PF00041 Fibronectin type III domain 237 304 3.4E-8 T 11-10-2018 IPR003961 Fibronectin type III GO:0005515 TF3313_2505 194c7fa1453efbd4d4ddb0e253477f49 606 SMART SM00060 332 416 61.0 T 11-10-2018 IPR003961 Fibronectin type III GO:0005515 TF3313_2505 194c7fa1453efbd4d4ddb0e253477f49 606 SMART SM00060 27 109 36.0 T 11-10-2018 IPR003961 Fibronectin type III GO:0005515 TF3313_2505 194c7fa1453efbd4d4ddb0e253477f49 606 SMART SM00060 227 311 0.0023 T 11-10-2018 IPR003961 Fibronectin type III GO:0005515 TF3313_2505 194c7fa1453efbd4d4ddb0e253477f49 606 Gene3D G3DSA:2.60.40.1080 432 533 7.9E-22 T 11-10-2018 TF3313_2505 194c7fa1453efbd4d4ddb0e253477f49 606 SUPERFAMILY SSF49265 37 110 9.05E-7 T 11-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 TF3313_2505 194c7fa1453efbd4d4ddb0e253477f49 606 SUPERFAMILY SSF49265 237 424 1.21E-14 T 11-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 TF3313_2505 194c7fa1453efbd4d4ddb0e253477f49 606 Gene3D G3DSA:2.60.40.10 33 114 3.3E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_2505 194c7fa1453efbd4d4ddb0e253477f49 606 Pfam PF02368 Bacterial Ig-like domain (group 2) 436 525 3.9E-7 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_2505 194c7fa1453efbd4d4ddb0e253477f49 606 SMART SM00635 435 516 4.6E-7 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_1167 8b6e743e55cde5b7bba030ad5f1b2d95 449 Gene3D G3DSA:1.25.40.390 33 449 1.3E-67 T 11-10-2018 TF3313_1167 8b6e743e55cde5b7bba030ad5f1b2d95 449 SUPERFAMILY SSF48452 21 448 2.63E-64 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1167 8b6e743e55cde5b7bba030ad5f1b2d95 449 Pfam PF07980 SusD family 285 447 2.1E-21 T 11-10-2018 IPR012944 RagB/SusD domain TF3313_1167 8b6e743e55cde5b7bba030ad5f1b2d95 449 Pfam PF14322 Starch-binding associating with outer membrane 25 227 6.2E-39 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_2241 8ee86f7f5f73c648a8659c7740e9328d 338 Hamap MF_00268 Protein RecA [recA]. 15 338 50.603 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TF3313_2241 8ee86f7f5f73c648a8659c7740e9328d 338 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 14 333 9.3E-172 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TF3313_2241 8ee86f7f5f73c648a8659c7740e9328d 338 Gene3D G3DSA:3.30.250.10 278 337 3.6E-23 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal TF3313_2241 8ee86f7f5f73c648a8659c7740e9328d 338 SMART SM00382 67 238 4.2E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_2241 8ee86f7f5f73c648a8659c7740e9328d 338 PRINTS PR00142 RecA protein signature 103 132 5.1E-81 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TF3313_2241 8ee86f7f5f73c648a8659c7740e9328d 338 PRINTS PR00142 RecA protein signature 253 282 5.1E-81 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TF3313_2241 8ee86f7f5f73c648a8659c7740e9328d 338 PRINTS PR00142 RecA protein signature 137 166 5.1E-81 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TF3313_2241 8ee86f7f5f73c648a8659c7740e9328d 338 PRINTS PR00142 RecA protein signature 220 248 5.1E-81 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TF3313_2241 8ee86f7f5f73c648a8659c7740e9328d 338 PRINTS PR00142 RecA protein signature 175 204 5.1E-81 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TF3313_2241 8ee86f7f5f73c648a8659c7740e9328d 338 PRINTS PR00142 RecA protein signature 307 324 5.1E-81 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TF3313_2241 8ee86f7f5f73c648a8659c7740e9328d 338 Gene3D G3DSA:3.40.50.300 36 277 8.0E-84 T 11-10-2018 TF3313_2241 8ee86f7f5f73c648a8659c7740e9328d 338 ProSitePatterns PS00321 recA signature. 223 231 - T 11-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 TF3313_2241 8ee86f7f5f73c648a8659c7740e9328d 338 SUPERFAMILY SSF52540 15 277 1.43E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2241 8ee86f7f5f73c648a8659c7740e9328d 338 Pfam PF00154 recA bacterial DNA recombination protein 17 278 1.2E-140 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TF3313_2241 8ee86f7f5f73c648a8659c7740e9328d 338 SUPERFAMILY SSF54752 278 335 1.83E-18 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal TF3313_1192 00d6eb543c5e758c3c757a540fd46651 213 Pfam PF08889 WbqC-like protein family 12 142 3.1E-28 T 11-10-2018 IPR014985 WbqC-like protein family TF3313_0158 98668273a1be5a788a84751ac524aa44 984 SUPERFAMILY SSF52980 696 868 1.39E-7 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 TF3313_0158 98668273a1be5a788a84751ac524aa44 984 SUPERFAMILY SSF52540 300 715 7.17E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0158 98668273a1be5a788a84751ac524aa44 984 Pfam PF12705 PD-(D/E)XK nuclease superfamily 698 982 9.8E-42 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type TF3313_0673 43032da2c2d63c53a32ea1b3e119cd69 122 Gene3D G3DSA:1.10.3290.10 32 119 1.3E-18 T 11-10-2018 IPR036597 Fido-like domain superfamily TF3313_0673 43032da2c2d63c53a32ea1b3e119cd69 122 SUPERFAMILY SSF140931 49 115 1.96E-11 T 11-10-2018 IPR036597 Fido-like domain superfamily TF3313_1431 83e2696a87adbea5d447bbd0e7daab6e 156 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 148 20.343 T 11-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 TF3313_1431 83e2696a87adbea5d447bbd0e7daab6e 156 Gene3D G3DSA:3.100.10.10 66 148 1.4E-20 T 11-10-2018 TF3313_1431 83e2696a87adbea5d447bbd0e7daab6e 156 SUPERFAMILY SSF52080 5 146 1.57E-44 T 11-10-2018 IPR036227 Ribosomal L18e/L15P superfamily TF3313_1431 83e2696a87adbea5d447bbd0e7daab6e 156 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 27 145 1.3E-35 T 11-10-2018 IPR021131 Ribosomal protein L18e/L15P TF3313_1431 83e2696a87adbea5d447bbd0e7daab6e 156 ProSitePatterns PS00475 Ribosomal protein L15 signature. 112 142 - T 11-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1431 83e2696a87adbea5d447bbd0e7daab6e 156 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 145 2.2E-48 T 11-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2842 8be55246df8a9d002bfdd54ec444dabe 208 Gene3D G3DSA:3.40.50.300 33 174 5.5E-7 T 11-10-2018 TF3313_2842 8be55246df8a9d002bfdd54ec444dabe 208 SUPERFAMILY SSF52540 36 150 1.76E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2842 8be55246df8a9d002bfdd54ec444dabe 208 SMART SM00382 33 175 0.0033 T 11-10-2018 IPR003593 AAA+ ATPase domain TF3313_2381 85d3c819738d7857aa36b36dc8cc7bdf 253 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 9 243 49.388 T 11-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 TF3313_2381 85d3c819738d7857aa36b36dc8cc7bdf 253 Gene3D G3DSA:3.40.50.150 8 243 6.1E-56 T 11-10-2018 TF3313_2381 85d3c819738d7857aa36b36dc8cc7bdf 253 SUPERFAMILY SSF53335 9 171 1.35E-28 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_2381 85d3c819738d7857aa36b36dc8cc7bdf 253 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 116 122 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TF3313_2381 85d3c819738d7857aa36b36dc8cc7bdf 253 Pfam PF05175 Methyltransferase small domain 43 129 3.7E-13 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 TF3313_2623 52a145761c679853fc2d2511b64003d0 717 SUPERFAMILY SSF49265 47 228 1.86E-5 T 11-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 TF3313_2623 52a145761c679853fc2d2511b64003d0 717 Gene3D G3DSA:2.120.10.80 454 717 7.1E-27 T 11-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 TF3313_2623 52a145761c679853fc2d2511b64003d0 717 SUPERFAMILY SSF117281 464 713 4.97E-30 T 11-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 TF3313_1533 f4d9ef50650675ab3efdeed7d2ef7115 257 Gene3D G3DSA:3.40.50.720 1 161 1.1E-21 T 11-10-2018 TF3313_1533 f4d9ef50650675ab3efdeed7d2ef7115 257 Pfam PF02153 Prephenate dehydrogenase 46 249 1.6E-16 T 11-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 TF3313_1533 f4d9ef50650675ab3efdeed7d2ef7115 257 SUPERFAMILY SSF48179 156 255 5.89E-11 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TF3313_1533 f4d9ef50650675ab3efdeed7d2ef7115 257 SUPERFAMILY SSF51735 1 132 6.68E-22 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_0174 83228bd8d7e374c02e6bf9aede88ffac 381 SUPERFAMILY SSF52980 2 354 9.98E-21 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 TF3313_0174 83228bd8d7e374c02e6bf9aede88ffac 381 Pfam PF09002 Domain of unknown function (DUF1887) 249 340 4.4E-7 T 11-10-2018 IPR015093 Protein of unknown function DUF1887 TF3313_0174 83228bd8d7e374c02e6bf9aede88ffac 381 Gene3D G3DSA:3.40.1350.10 243 370 1.5E-13 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 TF3313_0778 07e987485371634423103a341e1fa933 84 Pfam PF14903 WG containing repeat 48 72 4.9E-7 T 11-10-2018 IPR032774 WG containing repeat TF3313_2596 fa196110c0a0f69b9cae33cfab4a3fbe 887 SUPERFAMILY SSF53335 138 575 1.35E-30 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_1448 2901284d24837d2fd62cdb9459b2dcf4 409 Pfam PF13520 Amino acid permease 1 385 8.2E-44 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 TF3313_1448 2901284d24837d2fd62cdb9459b2dcf4 409 PIRSF PIRSF006060 1 404 4.8E-49 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 TF3313_1448 2901284d24837d2fd62cdb9459b2dcf4 409 Gene3D G3DSA:1.20.1740.10 1 409 9.9E-68 T 11-10-2018 TF3313_1185 f0b4a71c1780a3a831555bb3000f08ec 187 SUPERFAMILY SSF89028 6 183 7.46E-59 T 11-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 TF3313_1185 f0b4a71c1780a3a831555bb3000f08ec 187 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 7 183 3.1E-56 T 11-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 TF3313_1185 f0b4a71c1780a3a831555bb3000f08ec 187 Pfam PF01923 Cobalamin adenosyltransferase 6 169 5.0E-57 T 11-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 TF3313_1185 f0b4a71c1780a3a831555bb3000f08ec 187 Gene3D G3DSA:1.20.1200.10 15 186 1.7E-58 T 11-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 TF3313_1185 f0b4a71c1780a3a831555bb3000f08ec 187 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 12 183 2.0E-59 T 11-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 TF3313_1926 a7fcb2fc2c7d05cf0b43544c46b29c5a 189 Pfam PF16357 Putative PepSY_TM-like 36 186 2.2E-10 T 11-10-2018 IPR032307 Putative PepSY TM-like protein TF3313_1271 0c6e73ba25ae4f3b83de30cfd9e34ef6 339 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 21 304 1.2E-12 T 11-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD TF3313_1271 0c6e73ba25ae4f3b83de30cfd9e34ef6 339 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 13 313 7.4E-39 T 11-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD TF3313_1581 c89e3a1f65abcf770445fa09b82dab06 276 Gene3D G3DSA:1.25.40.10 18 172 2.1E-30 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1581 c89e3a1f65abcf770445fa09b82dab06 276 Pfam PF14559 Tetratricopeptide repeat 73 134 3.3E-7 T 11-10-2018 TF3313_1581 c89e3a1f65abcf770445fa09b82dab06 276 Gene3D G3DSA:1.25.40.10 173 275 1.0E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1581 c89e3a1f65abcf770445fa09b82dab06 276 SUPERFAMILY SSF48452 124 264 3.16E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1581 c89e3a1f65abcf770445fa09b82dab06 276 SMART SM00028 95 128 2.3 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1581 c89e3a1f65abcf770445fa09b82dab06 276 SMART SM00028 232 265 30.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1581 c89e3a1f65abcf770445fa09b82dab06 276 SMART SM00028 197 230 160.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1581 c89e3a1f65abcf770445fa09b82dab06 276 SMART SM00028 24 57 120.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1581 c89e3a1f65abcf770445fa09b82dab06 276 SMART SM00028 61 94 1.8E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1581 c89e3a1f65abcf770445fa09b82dab06 276 SMART SM00028 129 162 0.2 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1581 c89e3a1f65abcf770445fa09b82dab06 276 SUPERFAMILY SSF48452 56 185 2.72E-28 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1645 9d64bc587bcfc9a48273667298c403e1 374 Gene3D G3DSA:2.60.120.1440 142 294 1.2E-36 T 11-10-2018 TF3313_1645 9d64bc587bcfc9a48273667298c403e1 374 PIRSF PIRSF018266 141 371 2.5E-49 T 11-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component TF3313_1645 9d64bc587bcfc9a48273667298c403e1 374 PIRSF PIRSF018266 1 114 1.5E-7 T 11-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component TF3313_1645 9d64bc587bcfc9a48273667298c403e1 374 Pfam PF04773 FecR protein 167 257 1.4E-16 T 11-10-2018 IPR006860 FecR protein TF3313_1645 9d64bc587bcfc9a48273667298c403e1 374 Gene3D G3DSA:3.55.50.30 296 353 4.4E-6 T 11-10-2018 TF3313_1645 9d64bc587bcfc9a48273667298c403e1 374 Pfam PF16344 Domain of unknown function (DUF4974) 268 357 1.3E-13 T 11-10-2018 IPR032508 Protein FecR, C-terminal TF3313_2164 e90a2f2e5782cbcaadce0cc7294465e4 336 Pfam PF03787 RAMP superfamily 54 310 3.7E-9 T 11-10-2018 IPR005537 CRISPR type III-associated RAMP protein TF3313_2164 e90a2f2e5782cbcaadce0cc7294465e4 336 TIGRFAM TIGR01899 cas_TM1807_csm5: CRISPR type III-A/MTUBE-associated RAMP protein Csm5 22 330 1.9E-21 T 11-10-2018 IPR010173 CRISPR-associated protein, TM1807 TF3313_0148 fb3e4c34a3364346d9a14039fb60b40e 308 Pfam PF01029 NusB family 203 296 2.8E-22 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 TF3313_0148 fb3e4c34a3364346d9a14039fb60b40e 308 Gene3D G3DSA:1.10.940.10 175 305 1.5E-28 T 11-10-2018 IPR035926 NusB-like superfamily TF3313_0148 fb3e4c34a3364346d9a14039fb60b40e 308 SUPERFAMILY SSF48013 181 300 3.53E-25 T 11-10-2018 IPR035926 NusB-like superfamily TF3313_0148 fb3e4c34a3364346d9a14039fb60b40e 308 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 184 298 1.7E-29 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 TF3313_1456 49f949128673455f09d4dadf21184e31 113 SUPERFAMILY SSF51182 30 108 1.3E-21 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily TF3313_1456 49f949128673455f09d4dadf21184e31 113 Gene3D G3DSA:2.60.120.10 1 106 5.0E-23 T 11-10-2018 IPR014710 RmlC-like jelly roll fold TF3313_1456 49f949128673455f09d4dadf21184e31 113 Pfam PF07883 Cupin domain 39 105 1.6E-15 T 11-10-2018 IPR013096 Cupin 2, conserved barrel TF3313_1957 cfd6b56a2a05651c161951e3f516af41 180 Gene3D G3DSA:1.10.3210.10 14 170 9.6E-9 T 11-10-2018 TF3313_1957 cfd6b56a2a05651c161951e3f516af41 180 TIGRFAM TIGR00277 HDIG: HDIG domain 21 94 1.8E-8 T 11-10-2018 IPR006675 HDIG domain TF3313_1957 cfd6b56a2a05651c161951e3f516af41 180 SUPERFAMILY SSF109604 21 141 1.05E-13 T 11-10-2018 TF3313_1957 cfd6b56a2a05651c161951e3f516af41 180 Pfam PF01966 HD domain 22 140 1.9E-8 T 11-10-2018 IPR006674 HD domain TF3313_0342 64e9471c83bdb63b7311d0c07ee210c0 445 Pfam PF02875 Mur ligase family, glutamate ligase domain 307 380 4.2E-7 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 TF3313_0342 64e9471c83bdb63b7311d0c07ee210c0 445 SUPERFAMILY SSF53623 94 304 1.03E-49 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TF3313_0342 64e9471c83bdb63b7311d0c07ee210c0 445 SUPERFAMILY SSF51984 3 92 4.58E-15 T 11-10-2018 TF3313_0342 64e9471c83bdb63b7311d0c07ee210c0 445 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 3 445 31.959 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TF3313_0342 64e9471c83bdb63b7311d0c07ee210c0 445 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 5 443 3.3E-117 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TF3313_0342 64e9471c83bdb63b7311d0c07ee210c0 445 Gene3D G3DSA:3.40.1190.10 92 306 7.6E-57 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TF3313_0342 64e9471c83bdb63b7311d0c07ee210c0 445 SUPERFAMILY SSF53244 306 445 7.32E-43 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TF3313_0342 64e9471c83bdb63b7311d0c07ee210c0 445 Gene3D G3DSA:3.90.190.20 312 445 5.4E-44 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TF3313_0342 64e9471c83bdb63b7311d0c07ee210c0 445 Gene3D G3DSA:3.40.50.720 1 91 9.2E-16 T 11-10-2018 TF3313_0342 64e9471c83bdb63b7311d0c07ee210c0 445 Pfam PF08245 Mur ligase middle domain 108 286 2.6E-36 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TF3313_0750 d7a59ab2fc190fca648d412ffad91d79 228 Gene3D G3DSA:2.40.50.140 71 138 1.2E-5 T 11-10-2018 TF3313_0750 d7a59ab2fc190fca648d412ffad91d79 228 Gene3D G3DSA:1.10.10.10 140 200 5.5E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_2668 a9d7e9a957c7f60a878448ec7e9d3cc1 356 Pfam PF16125 Domain of unknown function (DUF4837) 29 322 7.9E-103 T 11-10-2018 IPR032286 Protein of unknown function DUF4837 TF3313_2628 7877e29fc14ec827e020bbb102596cec 303 SUPERFAMILY SSF55729 2 140 1.69E-34 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TF3313_2628 7877e29fc14ec827e020bbb102596cec 303 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 24 292 1.4E-48 T 11-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal TF3313_2628 7877e29fc14ec827e020bbb102596cec 303 PIRSF PIRSF018688 1 303 1.2E-95 T 11-10-2018 IPR016732 Uncharacterised conserved protein UCP018688 TF3313_2628 7877e29fc14ec827e020bbb102596cec 303 SUPERFAMILY SSF55729 141 299 7.1E-55 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TF3313_2628 7877e29fc14ec827e020bbb102596cec 303 Gene3D G3DSA:3.40.630.30 3 296 5.2E-107 T 11-10-2018 TF3313_2628 7877e29fc14ec827e020bbb102596cec 303 Gene3D G3DSA:3.40.630.30 128 295 5.2E-107 T 11-10-2018 TF3313_2835 2a192d81e53465daf456bc98b7a01e1d 215 SMART SM01252 23 122 3.6E-8 T 11-10-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding TF3313_2835 2a192d81e53465daf456bc98b7a01e1d 215 Pfam PF04383 KilA-N domain 29 116 2.8E-11 T 11-10-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding TF3313_0329 8f9a310d693aed8135101d09149c4715 281 TIGRFAM TIGR01200 GLPGLI: GLPGLI family protein 6 230 3.5E-41 T 11-10-2018 IPR005901 GLPGLI family protein TF3313_1308 fa02c47e2783370b77c3b6765e77be74 105 Gene3D G3DSA:3.30.300.130 3 104 4.1E-39 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily TF3313_1308 fa02c47e2783370b77c3b6765e77be74 105 SUPERFAMILY SSF117916 8 103 1.05E-33 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily TF3313_1308 fa02c47e2783370b77c3b6765e77be74 105 Pfam PF01883 Iron-sulfur cluster assembly protein 9 81 5.6E-21 T 11-10-2018 IPR002744 MIP18 family-like TF3313_1544 eab0448094746e272a181b1994e98f62 57 Pfam PF01906 Putative heavy-metal-binding 1 57 3.3E-15 T 11-10-2018 IPR002765 Uncharacterised protein family UPF0145 TF3313_1544 eab0448094746e272a181b1994e98f62 57 SUPERFAMILY SSF117782 1 57 9.42E-14 T 11-10-2018 IPR035439 UPF0145 domain superfamily TF3313_1544 eab0448094746e272a181b1994e98f62 57 Gene3D G3DSA:3.30.110.70 1 57 1.1E-15 T 11-10-2018 TF3313_0086 e5d87cd8b5087e2af80f8261249c1d2a 233 SUPERFAMILY SSF158745 16 172 1.12E-15 T 11-10-2018 TF3313_0086 e5d87cd8b5087e2af80f8261249c1d2a 233 Pfam PF05147 Lanthionine synthetase C-like protein 27 171 1.6E-7 T 11-10-2018 IPR007822 Lanthionine synthetase C-like TF3313_0086 e5d87cd8b5087e2af80f8261249c1d2a 233 Gene3D G3DSA:1.50.10.20 2 181 1.7E-6 T 11-10-2018 TF3313_2572 550e58cb837aa1dd9c93fb5e92ba6fd0 333 SUPERFAMILY SSF51735 5 155 1.51E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_2572 550e58cb837aa1dd9c93fb5e92ba6fd0 333 Gene3D G3DSA:3.40.50.720 1 138 2.5E-39 T 11-10-2018 TF3313_2572 550e58cb837aa1dd9c93fb5e92ba6fd0 333 SUPERFAMILY SSF55347 131 296 4.09E-26 T 11-10-2018 TF3313_2572 550e58cb837aa1dd9c93fb5e92ba6fd0 333 Gene3D G3DSA:3.30.360.10 139 332 3.0E-56 T 11-10-2018 TF3313_2572 550e58cb837aa1dd9c93fb5e92ba6fd0 333 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 123 1.3E-24 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 TF3313_2073 e96acea205f0feec2b7a544272fc6150 527 Pfam PF14322 Starch-binding associating with outer membrane 110 233 8.4E-17 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_2073 e96acea205f0feec2b7a544272fc6150 527 Gene3D G3DSA:1.25.40.10 211 466 4.9E-162 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2073 e96acea205f0feec2b7a544272fc6150 527 Pfam PF07980 SusD family 375 527 1.2E-30 T 11-10-2018 IPR012944 RagB/SusD domain TF3313_2073 e96acea205f0feec2b7a544272fc6150 527 Gene3D G3DSA:1.10.3780.10 309 384 4.9E-162 T 11-10-2018 TF3313_2073 e96acea205f0feec2b7a544272fc6150 527 Gene3D G3DSA:1.25.40.390 83 527 4.9E-162 T 11-10-2018 TF3313_2073 e96acea205f0feec2b7a544272fc6150 527 SUPERFAMILY SSF48452 24 527 6.57E-107 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0675 4df2c133ac15f168221d2f2024f5c6f4 345 Pfam PF13088 BNR repeat-like domain 52 323 7.7E-72 T 11-10-2018 IPR011040 Sialidase KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 TF3313_0675 4df2c133ac15f168221d2f2024f5c6f4 345 SUPERFAMILY SSF50939 31 340 7.57E-47 T 11-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 TF3313_0675 4df2c133ac15f168221d2f2024f5c6f4 345 Gene3D G3DSA:2.120.10.10 25 341 8.4E-25 T 11-10-2018 TF3313_2566 e9149e1ca4ccd8553b94a6ca65f0dded 292 SMART SM00014 153 254 2.3E-8 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase TF3313_2566 e9149e1ca4ccd8553b94a6ca65f0dded 292 Pfam PF01569 PAP2 superfamily 183 257 2.8E-13 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase TF3313_2566 e9149e1ca4ccd8553b94a6ca65f0dded 292 Gene3D G3DSA:1.20.144.10 180 272 9.6E-17 T 11-10-2018 TF3313_2566 e9149e1ca4ccd8553b94a6ca65f0dded 292 SUPERFAMILY SSF48317 84 263 1.09E-25 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily TF3313_0920 c6a267b5245c6cfad0c62d12ab007864 120 Pfam PF13004 Putative binding domain, N-terminal 63 120 8.3E-12 T 11-10-2018 IPR024361 Bacteroidetes-Associated Carbohydrate-binding Often N-terminal MetaCyc: PWY-6807 TF3313_0920 c6a267b5245c6cfad0c62d12ab007864 120 Gene3D G3DSA:2.60.40.10 32 119 2.2E-14 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_1071 b8bb0fdd791048f3197893c4366c65ef 239 Gene3D G3DSA:3.30.450.20 6 167 1.0E-11 T 11-10-2018 TF3313_1071 b8bb0fdd791048f3197893c4366c65ef 239 SUPERFAMILY SSF46894 173 238 4.08E-9 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TF3313_1071 b8bb0fdd791048f3197893c4366c65ef 239 Gene3D G3DSA:1.10.10.10 178 239 2.0E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_1071 b8bb0fdd791048f3197893c4366c65ef 239 Pfam PF00196 Bacterial regulatory proteins, luxR family 179 232 6.1E-6 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TF3313_1322 5ec80584077b43626037ebb832d13c73 248 Gene3D G3DSA:3.40.1180.10 1 240 4.5E-95 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 TF3313_1322 5ec80584077b43626037ebb832d13c73 248 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 185 202 - T 11-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 TF3313_1322 5ec80584077b43626037ebb832d13c73 248 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 12 240 40.512 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 TF3313_1322 5ec80584077b43626037ebb832d13c73 248 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 12 239 2.7E-87 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 TF3313_1322 5ec80584077b43626037ebb832d13c73 248 Pfam PF01255 Putative undecaprenyl diphosphate synthase 19 239 2.5E-81 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 TF3313_1322 5ec80584077b43626037ebb832d13c73 248 SUPERFAMILY SSF64005 7 234 1.44E-86 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 TF3313_0448 ae5c431a20f10e8071b41d8597c2978e 61 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 17.572 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_0448 ae5c431a20f10e8071b41d8597c2978e 61 SUPERFAMILY SSF57829 1 55 8.55E-19 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 TF3313_0448 ae5c431a20f10e8071b41d8597c2978e 61 Pfam PF01783 Ribosomal L32p protein family 2 57 5.8E-21 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_0448 ae5c431a20f10e8071b41d8597c2978e 61 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 2.3E-22 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2474 2d3c40fcbb880cb7fde9450aaca68435 267 SUPERFAMILY SSF55060 159 250 6.23E-19 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily TF3313_2474 2d3c40fcbb880cb7fde9450aaca68435 267 SUPERFAMILY SSF54211 3 154 3.34E-33 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TF3313_2474 2d3c40fcbb880cb7fde9450aaca68435 267 PIRSF PIRSF010376 1 255 1.9E-70 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 TF3313_2474 2d3c40fcbb880cb7fde9450aaca68435 267 Pfam PF08544 GHMP kinases C terminal 211 250 1.1E-6 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain TF3313_2474 2d3c40fcbb880cb7fde9450aaca68435 267 Pfam PF00288 GHMP kinases N terminal domain 83 136 4.0E-6 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 TF3313_2474 2d3c40fcbb880cb7fde9450aaca68435 267 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 1 267 27.462 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 TF3313_2474 2d3c40fcbb880cb7fde9450aaca68435 267 Gene3D G3DSA:3.30.70.890 160 256 1.2E-23 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily TF3313_2474 2d3c40fcbb880cb7fde9450aaca68435 267 Gene3D G3DSA:3.30.230.10 2 155 3.8E-46 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TF3313_2474 2d3c40fcbb880cb7fde9450aaca68435 267 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 7 251 1.2E-50 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 TF3313_0074 9a10fe48926313525417590acda1e648 177 SUPERFAMILY SSF158745 1 106 2.22E-11 T 11-10-2018 TF3313_1739 aaf5a1f56c894ca62b8e44a178bc9ba9 659 Pfam PF03993 Domain of Unknown Function (DUF349) 312 390 1.1E-16 T 11-10-2018 IPR007139 Protein of unknown function DUF349 TF3313_1739 aaf5a1f56c894ca62b8e44a178bc9ba9 659 Pfam PF03993 Domain of Unknown Function (DUF349) 395 467 1.2E-20 T 11-10-2018 IPR007139 Protein of unknown function DUF349 TF3313_1739 aaf5a1f56c894ca62b8e44a178bc9ba9 659 Pfam PF03993 Domain of Unknown Function (DUF349) 235 308 4.7E-16 T 11-10-2018 IPR007139 Protein of unknown function DUF349 TF3313_1739 aaf5a1f56c894ca62b8e44a178bc9ba9 659 Pfam PF03993 Domain of Unknown Function (DUF349) 162 230 4.1E-12 T 11-10-2018 IPR007139 Protein of unknown function DUF349 TF3313_1739 aaf5a1f56c894ca62b8e44a178bc9ba9 659 Pfam PF03993 Domain of Unknown Function (DUF349) 471 543 2.8E-19 T 11-10-2018 IPR007139 Protein of unknown function DUF349 TF3313_1870 498dd04e95dd800c37999c01c6b962dd 177 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 11 173 15.935 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 TF3313_1870 498dd04e95dd800c37999c01c6b962dd 177 Gene3D G3DSA:2.40.30.60 11 99 2.2E-11 T 11-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 TF3313_1870 498dd04e95dd800c37999c01c6b962dd 177 Pfam PF01782 RimM N-terminal domain 14 95 8.7E-9 T 11-10-2018 IPR002676 RimM, N-terminal GO:0006364 TF3313_1870 498dd04e95dd800c37999c01c6b962dd 177 Gene3D G3DSA:2.30.30.240 100 177 3.9E-6 T 11-10-2018 TF3313_1870 498dd04e95dd800c37999c01c6b962dd 177 SUPERFAMILY SSF50447 11 99 8.47E-12 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TF3313_1870 498dd04e95dd800c37999c01c6b962dd 177 SUPERFAMILY SSF50346 106 172 1.26E-7 T 11-10-2018 IPR011033 PRC-barrel-like superfamily TF3313_1870 498dd04e95dd800c37999c01c6b962dd 177 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 13 172 1.2E-24 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 TF3313_2885 5259be767cb5a1891e4de8f031455a5b 379 Pfam PF01497 Periplasmic binding protein 99 336 1.0E-20 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain TF3313_2885 5259be767cb5a1891e4de8f031455a5b 379 Gene3D G3DSA:3.40.50.1980 87 374 5.6E-21 T 11-10-2018 TF3313_2885 5259be767cb5a1891e4de8f031455a5b 379 SUPERFAMILY SSF53807 89 364 1.18E-33 T 11-10-2018 TF3313_0413 8473390098d2b50d2b0fce4fa89924e1 205 Pfam PF09357 RteC protein 109 196 3.3E-26 T 11-10-2018 IPR018534 Tetracycline regulation of excision, RteC TF3313_2751 33349358695c10731966fd20e92943fb 285 SUPERFAMILY SSF56059 93 264 1.64E-9 T 11-10-2018 TF3313_2751 33349358695c10731966fd20e92943fb 285 Gene3D G3DSA:3.30.470.20 210 285 1.6E-5 T 11-10-2018 TF3313_1184 f1aac3ba8b1da98806fd4336f271bd16 320 Gene3D G3DSA:3.40.30.10 164 304 3.3E-22 T 11-10-2018 TF3313_1184 f1aac3ba8b1da98806fd4336f271bd16 320 Pfam PF13905 Thioredoxin-like 197 289 2.7E-7 T 11-10-2018 IPR012336 Thioredoxin-like fold TF3313_1184 f1aac3ba8b1da98806fd4336f271bd16 320 SUPERFAMILY SSF52833 169 303 2.36E-7 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TF3313_1184 f1aac3ba8b1da98806fd4336f271bd16 320 Pfam PF17127 Domain of unknown function (DUF5106) 27 168 7.5E-45 T 11-10-2018 IPR033395 Domain of unknown function DUF5106 TF3313_2433 860bfbeea10164dfc3750002eeb3d3a2 602 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 251 596 25.526 T 11-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 TF3313_2433 860bfbeea10164dfc3750002eeb3d3a2 602 SUPERFAMILY SSF111342 216 522 4.18E-81 T 11-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 TF3313_2433 860bfbeea10164dfc3750002eeb3d3a2 602 Gene3D G3DSA:3.30.2110.10 253 420 1.4E-48 T 11-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 TF3313_2433 860bfbeea10164dfc3750002eeb3d3a2 602 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 258 523 2.5E-53 T 11-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 TF3313_2433 860bfbeea10164dfc3750002eeb3d3a2 602 Pfam PF01888 CbiD 251 506 1.6E-89 T 11-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 TF3313_2433 860bfbeea10164dfc3750002eeb3d3a2 602 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 2 225 2.4E-48 T 11-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 TF3313_2627 cca3041cc1febe56c9249932abcb1533 283 SUPERFAMILY SSF55729 10 249 1.4E-41 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TF3313_2627 cca3041cc1febe56c9249932abcb1533 283 Gene3D G3DSA:3.40.630.30 3 128 1.0E-24 T 11-10-2018 TF3313_2627 cca3041cc1febe56c9249932abcb1533 283 Pfam PF13527 Acetyltransferase (GNAT) domain 9 124 4.1E-27 T 11-10-2018 TF3313_2621 42e6882452101f24adff7d306c478aa7 625 SMART SM00220 14 302 2.0E-45 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 TF3313_2621 42e6882452101f24adff7d306c478aa7 625 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 162 174 - T 11-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 TF3313_2621 42e6882452101f24adff7d306c478aa7 625 Gene3D G3DSA:3.30.200.20 9 126 3.4E-13 T 11-10-2018 TF3313_2621 42e6882452101f24adff7d306c478aa7 625 Gene3D G3DSA:1.10.510.10 127 300 7.0E-37 T 11-10-2018 TF3313_2621 42e6882452101f24adff7d306c478aa7 625 Pfam PF00069 Protein kinase domain 83 292 1.9E-38 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 TF3313_2621 42e6882452101f24adff7d306c478aa7 625 SUPERFAMILY SSF56112 12 333 8.77E-58 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily TF3313_2350 36c858c50126d45415f3c3c7a3f084cb 365 SUPERFAMILY SSF102705 1 364 7.98E-117 T 11-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily TF3313_2350 36c858c50126d45415f3c3c7a3f084cb 365 Gene3D G3DSA:3.40.1390.30 2 124 1.7E-36 T 11-10-2018 TF3313_2350 36c858c50126d45415f3c3c7a3f084cb 365 Gene3D G3DSA:3.30.70.120 129 232 5.2E-37 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal TF3313_2350 36c858c50126d45415f3c3c7a3f084cb 365 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 348 1.0E-73 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 TF3313_2350 36c858c50126d45415f3c3c7a3f084cb 365 Gene3D G3DSA:3.40.1390.30 233 331 3.3E-13 T 11-10-2018 TF3313_2350 36c858c50126d45415f3c3c7a3f084cb 365 PIRSF PIRSF037489 1 365 3.7E-130 T 11-10-2018 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria TF3313_2350 36c858c50126d45415f3c3c7a3f084cb 365 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 3 360 6.9E-52 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 TF3313_2926 6d013e97b5161ce6f97129c18471825e 114 Pfam PF01934 Protein of unknown function DUF86 14 108 1.9E-22 T 11-10-2018 IPR008201 Protein of unknown function DUF86 TF3313_2813 fc348cde91f275e1da3e6edbd3415e75 78 Pfam PF13808 DDE_Tnp_1-associated 3 72 4.2E-13 T 11-10-2018 IPR032806 H repeat-associated protein, N-terminal TF3313_0758 551a9e37fe8a568d4a46c647b2245fa7 452 SUPERFAMILY SSF161070 11 445 9.02E-135 T 11-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 TF3313_0758 551a9e37fe8a568d4a46c647b2245fa7 452 Pfam PF00209 Sodium:neurotransmitter symporter family 10 124 7.9E-28 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 TF3313_0758 551a9e37fe8a568d4a46c647b2245fa7 452 Pfam PF00209 Sodium:neurotransmitter symporter family 151 443 2.5E-33 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 TF3313_0758 551a9e37fe8a568d4a46c647b2245fa7 452 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 29 43 - T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 TF3313_0758 551a9e37fe8a568d4a46c647b2245fa7 452 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 88 114 1.0E-15 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 TF3313_0758 551a9e37fe8a568d4a46c647b2245fa7 452 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 42 61 1.0E-15 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 TF3313_0758 551a9e37fe8a568d4a46c647b2245fa7 452 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 13 34 1.0E-15 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 TF3313_1379 5cc724c6abf1fc539ecdb9dd8fccb412 672 Gene3D G3DSA:2.40.170.20 198 670 2.9E-49 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_1379 5cc724c6abf1fc539ecdb9dd8fccb412 672 SUPERFAMILY SSF56935 70 670 1.77E-86 T 11-10-2018 TF3313_1379 5cc724c6abf1fc539ecdb9dd8fccb412 672 Pfam PF00593 TonB dependent receptor 235 670 4.1E-28 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_1379 5cc724c6abf1fc539ecdb9dd8fccb412 672 Pfam PF07715 TonB-dependent Receptor Plug Domain 85 189 6.2E-22 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_1379 5cc724c6abf1fc539ecdb9dd8fccb412 672 Gene3D G3DSA:2.170.130.10 62 197 2.0E-30 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_1301 4682e5d1410e85d04caff3f93a574f1c 436 SUPERFAMILY SSF102114 98 398 1.44E-40 T 11-10-2018 TF3313_1301 4682e5d1410e85d04caff3f93a574f1c 436 Pfam PF13353 4Fe-4S single cluster domain 103 218 4.6E-10 T 11-10-2018 TF3313_1301 4682e5d1410e85d04caff3f93a574f1c 436 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 327 406 1.1E-13 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain TF3313_1301 4682e5d1410e85d04caff3f93a574f1c 436 Gene3D G3DSA:3.20.20.70 94 431 1.7E-50 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_1301 4682e5d1410e85d04caff3f93a574f1c 436 Pfam PF04055 Radical SAM superfamily 102 265 1.4E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TF3313_0151 e6ba4743ab1fb20ee31fcc729e40b9a2 317 Pfam PF02517 CAAX protease self-immunity 155 248 2.6E-13 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 TF3313_2345 a5f89ebb3ba5c436fa680083b78b7014 264 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 39 255 2.4E-14 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 TF3313_2345 a5f89ebb3ba5c436fa680083b78b7014 264 SUPERFAMILY SSF51695 32 262 2.62E-50 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 TF3313_2345 a5f89ebb3ba5c436fa680083b78b7014 264 Gene3D G3DSA:3.20.20.190 31 264 9.2E-62 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 TF3313_0036 e956042b8caa5933afce99a4e1732091 284 Gene3D G3DSA:3.30.420.40 2 95 1.9E-23 T 11-10-2018 TF3313_0036 e956042b8caa5933afce99a4e1732091 284 SUPERFAMILY SSF53067 3 104 1.68E-25 T 11-10-2018 TF3313_0036 e956042b8caa5933afce99a4e1732091 284 Gene3D G3DSA:3.30.1360.250 141 229 2.0E-62 T 11-10-2018 TF3313_0036 e956042b8caa5933afce99a4e1732091 284 Gene3D G3DSA:3.30.420.40 96 275 2.0E-62 T 11-10-2018 TF3313_0036 e956042b8caa5933afce99a4e1732091 284 SUPERFAMILY SSF53067 107 276 4.43E-38 T 11-10-2018 TF3313_2837 34c6db565372d8eebba950ad8bf01b27 162 Gene3D G3DSA:3.40.50.150 2 136 3.9E-5 T 11-10-2018 TF3313_2837 34c6db565372d8eebba950ad8bf01b27 162 SUPERFAMILY SSF53335 4 158 1.0E-8 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_0810 990b5b81f30e2cf8fb2ae31182a2b01f 1401 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 945 1383 1.2E-61 T 11-10-2018 IPR007452 Translocation and assembly module TamB TF3313_2693 90dd0b354e113e1600e3cab9f7f04aa0 428 Pfam PF12698 ABC-2 family transporter protein 19 402 1.9E-55 T 11-10-2018 TF3313_2693 90dd0b354e113e1600e3cab9f7f04aa0 428 SUPERFAMILY SSF53850 52 181 5.97E-26 T 11-10-2018 TF3313_2693 90dd0b354e113e1600e3cab9f7f04aa0 428 Gene3D G3DSA:3.40.190.10 43 156 1.9E-31 T 11-10-2018 TF3313_2230 d201326feda02683228b88fd35ddc5eb 317 Gene3D G3DSA:3.20.20.220 2 317 9.3E-87 T 11-10-2018 TF3313_2230 d201326feda02683228b88fd35ddc5eb 317 SUPERFAMILY SSF51730 7 315 2.35E-71 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like TF3313_2230 d201326feda02683228b88fd35ddc5eb 317 Pfam PF02219 Methylenetetrahydrofolate reductase 9 314 2.9E-58 T 11-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 TF3313_0079 6fde0acbd6f335e8ffa77a95e4c7e3e2 756 Gene3D G3DSA:3.90.226.10 547 755 1.8E-28 T 11-10-2018 TF3313_0079 6fde0acbd6f335e8ffa77a95e4c7e3e2 756 Gene3D G3DSA:2.30.42.10 441 545 8.1E-8 T 11-10-2018 TF3313_0079 6fde0acbd6f335e8ffa77a95e4c7e3e2 756 Pfam PF03572 Peptidase family S41 585 725 7.0E-12 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 TF3313_0079 6fde0acbd6f335e8ffa77a95e4c7e3e2 756 SMART SM00245 506 726 7.6E-5 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 TF3313_0079 6fde0acbd6f335e8ffa77a95e4c7e3e2 756 Gene3D G3DSA:2.60.120.260 25 184 2.3E-18 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_0079 6fde0acbd6f335e8ffa77a95e4c7e3e2 756 SUPERFAMILY SSF52096 361 750 5.14E-34 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TF3313_0079 6fde0acbd6f335e8ffa77a95e4c7e3e2 756 Gene3D G3DSA:3.30.750.44 361 440 6.4E-5 T 11-10-2018 TF3313_2711 f1ee264a47d92cce50b121da4456757a 231 Hamap MF_00528 Septum formation protein Maf [maf]. 43 231 27.33 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 TF3313_2711 f1ee264a47d92cce50b121da4456757a 231 SUPERFAMILY SSF52972 42 224 1.7E-55 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like TF3313_2711 f1ee264a47d92cce50b121da4456757a 231 Gene3D G3DSA:3.90.950.10 42 230 5.4E-62 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like TF3313_2711 f1ee264a47d92cce50b121da4456757a 231 TIGRFAM TIGR00172 maf: septum formation protein Maf 42 224 1.4E-45 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 TF3313_2711 f1ee264a47d92cce50b121da4456757a 231 Pfam PF02545 Maf-like protein 43 225 4.5E-54 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 TF3313_2711 f1ee264a47d92cce50b121da4456757a 231 PIRSF PIRSF006305 36 231 5.2E-56 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 TF3313_0428 49d0bc277871e88f6f515202818a271f 76 Pfam PF01381 Helix-turn-helix 7 61 1.7E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TF3313_0428 49d0bc277871e88f6f515202818a271f 76 Gene3D G3DSA:1.10.260.40 1 66 4.4E-31 T 11-10-2018 TF3313_0428 49d0bc277871e88f6f515202818a271f 76 SUPERFAMILY SSF47413 5 65 3.66E-12 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TF3313_0428 49d0bc277871e88f6f515202818a271f 76 SMART SM00530 6 61 1.7E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TF3313_1873 cf367dc5b4caa603f7e7cbf60433e766 513 Pfam PF01964 Radical SAM ThiC family 121 510 3.2E-119 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 TF3313_1873 cf367dc5b4caa603f7e7cbf60433e766 513 Pfam PF13667 ThiC-associated domain 11 87 1.1E-21 T 11-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 TF3313_1873 cf367dc5b4caa603f7e7cbf60433e766 513 Gene3D G3DSA:3.20.20.540 174 485 1.4E-92 T 11-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 TF3313_0827 8d336173ec6285f56a7843e7c6824802 350 Pfam PF13884 Chaperone of endosialidase 118 206 3.4E-10 T 11-10-2018 IPR030392 Intramolecular chaperone auto-processing domain TF3313_2195 0a356a56dc59787a0e3a9454225797bd 551 SUPERFAMILY SSF103473 12 540 1.74E-31 T 11-10-2018 IPR036259 MFS transporter superfamily TF3313_2195 0a356a56dc59787a0e3a9454225797bd 551 Pfam PF07690 Major Facilitator Superfamily 23 477 3.5E-13 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TF3313_2594 00d12955ff2792b04e09f6854d897c2a 324 Gene3D G3DSA:3.40.50.300 101 307 2.6E-71 T 11-10-2018 TF3313_2594 00d12955ff2792b04e09f6854d897c2a 324 Pfam PF02562 PhoH-like protein 104 307 2.5E-86 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 TF3313_2594 00d12955ff2792b04e09f6854d897c2a 324 SUPERFAMILY SSF52540 45 285 2.34E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2615 597279d1adec536c50b364737091d6f9 906 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 794 812 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 TF3313_2615 597279d1adec536c50b364737091d6f9 906 Gene3D G3DSA:3.30.470.20 255 375 3.5E-37 T 11-10-2018 TF3313_2615 597279d1adec536c50b364737091d6f9 906 SUPERFAMILY SSF52009 424 545 3.01E-37 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 TF3313_2615 597279d1adec536c50b364737091d6f9 906 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 4 904 0.0 T 11-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 TF3313_2615 597279d1adec536c50b364737091d6f9 906 Pfam PF00391 PEP-utilising enzyme, mobile domain 457 537 2.3E-25 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 TF3313_2615 597279d1adec536c50b364737091d6f9 906 PIRSF PIRSF000853 2 906 0.0 T 11-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 TF3313_2615 597279d1adec536c50b364737091d6f9 906 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 22 390 4.8E-82 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 TF3313_2615 597279d1adec536c50b364737091d6f9 906 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 553 902 1.2E-92 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 TF3313_2615 597279d1adec536c50b364737091d6f9 906 SUPERFAMILY SSF56059 3 412 1.53E-133 T 11-10-2018 TF3313_2615 597279d1adec536c50b364737091d6f9 906 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 484 495 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 TF3313_2615 597279d1adec536c50b364737091d6f9 906 Gene3D G3DSA:3.30.1490.20 15 254 7.8E-101 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TF3313_2615 597279d1adec536c50b364737091d6f9 906 Gene3D G3DSA:3.50.30.10 417 543 9.3E-75 T 11-10-2018 TF3313_2615 597279d1adec536c50b364737091d6f9 906 Gene3D G3DSA:3.20.20.60 566 906 1.3E-152 T 11-10-2018 TF3313_2615 597279d1adec536c50b364737091d6f9 906 SUPERFAMILY SSF51621 546 904 3.39E-127 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TF3313_2615 597279d1adec536c50b364737091d6f9 906 Gene3D G3DSA:1.10.189.10 379 563 9.3E-75 T 11-10-2018 TF3313_2615 597279d1adec536c50b364737091d6f9 906 Gene3D G3DSA:1.20.80.30 116 209 7.8E-101 T 11-10-2018 TF3313_2181 b74ad29b144cd08c00c04692df5b66d7 845 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 26 645 4.8E-175 T 11-10-2018 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TF3313_2181 b74ad29b144cd08c00c04692df5b66d7 845 PRINTS PR01183 Ribonucleotide reductase large chain signature 420 443 1.1E-14 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TF3313_2181 b74ad29b144cd08c00c04692df5b66d7 845 PRINTS PR01183 Ribonucleotide reductase large chain signature 478 505 1.1E-14 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TF3313_2181 b74ad29b144cd08c00c04692df5b66d7 845 PRINTS PR01183 Ribonucleotide reductase large chain signature 181 200 1.1E-14 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TF3313_2181 b74ad29b144cd08c00c04692df5b66d7 845 PRINTS PR01183 Ribonucleotide reductase large chain signature 392 414 1.1E-14 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TF3313_2181 b74ad29b144cd08c00c04692df5b66d7 845 Gene3D G3DSA:3.20.70.20 13 652 7.6E-157 T 11-10-2018 TF3313_2181 b74ad29b144cd08c00c04692df5b66d7 845 SUPERFAMILY SSF51998 21 657 4.58E-127 T 11-10-2018 TF3313_2181 b74ad29b144cd08c00c04692df5b66d7 845 Pfam PF02867 Ribonucleotide reductase, barrel domain 104 636 2.3E-130 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TF3313_0515 4a3ced9d4581cb783ed22d6ca7ff9178 184 SUPERFAMILY SSF81333 113 175 1.44E-5 T 11-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily TF3313_0515 4a3ced9d4581cb783ed22d6ca7ff9178 184 Gene3D G3DSA:1.20.120.610 26 181 8.8E-35 T 11-10-2018 TF3313_0515 4a3ced9d4581cb783ed22d6ca7ff9178 184 SUPERFAMILY SSF81333 36 100 1.7E-7 T 11-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily TF3313_0515 4a3ced9d4581cb783ed22d6ca7ff9178 184 Pfam PF00137 ATP synthase subunit C 42 98 6.0E-11 T 11-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 TF3313_0515 4a3ced9d4581cb783ed22d6ca7ff9178 184 Pfam PF00137 ATP synthase subunit C 120 176 1.3E-8 T 11-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 TF3313_1580 e145e1d368d29815f2210b8f7bad3b3b 154 PIRSF PIRSF006614 2 151 1.2E-55 T 11-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 TF3313_1580 e145e1d368d29815f2210b8f7bad3b3b 154 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 6 131 27.368 T 11-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 TF3313_1580 e145e1d368d29815f2210b8f7bad3b3b 154 Pfam PF02142 MGS-like domain 20 117 1.9E-9 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain TF3313_1580 e145e1d368d29815f2210b8f7bad3b3b 154 Gene3D G3DSA:3.40.50.1380 1 152 1.8E-52 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily TF3313_1580 e145e1d368d29815f2210b8f7bad3b3b 154 SMART SM00851 19 118 1.3E-6 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain TF3313_1580 e145e1d368d29815f2210b8f7bad3b3b 154 SUPERFAMILY SSF52335 2 137 1.72E-42 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily TF3313_1535 dafd0bd6f332d47d3a7cc4ee1c2007d7 392 SUPERFAMILY SSF53383 3 390 1.08E-93 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TF3313_1535 dafd0bd6f332d47d3a7cc4ee1c2007d7 392 Gene3D G3DSA:3.40.640.10 40 287 4.5E-101 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TF3313_1535 dafd0bd6f332d47d3a7cc4ee1c2007d7 392 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 239 252 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 TF3313_1535 dafd0bd6f332d47d3a7cc4ee1c2007d7 392 Gene3D G3DSA:3.90.1150.10 25 385 4.5E-101 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TF3313_1535 dafd0bd6f332d47d3a7cc4ee1c2007d7 392 Pfam PF00155 Aminotransferase class I and II 31 386 1.5E-55 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TF3313_1144 d334fd2b7c5a8c528e3b46f7e1de70db 546 Pfam PF05681 Fumarate hydratase (Fumerase) 52 327 6.6E-84 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 TF3313_1144 d334fd2b7c5a8c528e3b46f7e1de70db 546 PIRSF PIRSF001394 31 546 2.7E-226 T 11-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 TF3313_1144 d334fd2b7c5a8c528e3b46f7e1de70db 546 Pfam PF05683 Fumarase C-terminus 333 538 7.3E-91 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 TF3313_1144 d334fd2b7c5a8c528e3b46f7e1de70db 546 SUPERFAMILY SSF117457 362 537 8.24E-62 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 TF3313_1144 d334fd2b7c5a8c528e3b46f7e1de70db 546 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 60 326 4.3E-30 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 TF3313_1144 d334fd2b7c5a8c528e3b46f7e1de70db 546 Gene3D G3DSA:3.20.130.10 351 538 2.0E-58 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 TF3313_1144 d334fd2b7c5a8c528e3b46f7e1de70db 546 ProSitePatterns PS00163 Fumarate lyases signature. 457 466 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 TF3313_1144 d334fd2b7c5a8c528e3b46f7e1de70db 546 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 374 538 7.3E-62 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 TF3313_2908 65dda7489772cc5fd4da3b8d84f717fe 355 Pfam PF00294 pfkB family carbohydrate kinase 40 331 9.6E-24 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB TF3313_2908 65dda7489772cc5fd4da3b8d84f717fe 355 SUPERFAMILY SSF53613 7 344 3.27E-50 T 11-10-2018 IPR029056 Ribokinase-like TF3313_2908 65dda7489772cc5fd4da3b8d84f717fe 355 Gene3D G3DSA:3.40.1190.20 1 355 1.6E-78 T 11-10-2018 IPR029056 Ribokinase-like TF3313_2590 2b2039eafda4be6e341b5a8c21847e42 766 Gene3D G3DSA:3.30.2080.10 299 744 4.2E-295 T 11-10-2018 TF3313_2590 2b2039eafda4be6e341b5a8c21847e42 766 Gene3D G3DSA:2.70.98.10 31 353 4.2E-295 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 TF3313_2590 2b2039eafda4be6e341b5a8c21847e42 766 Gene3D G3DSA:1.20.1610.10 449 616 4.2E-295 T 11-10-2018 TF3313_2590 2b2039eafda4be6e341b5a8c21847e42 766 Pfam PF07971 Glycosyl hydrolase family 92 242 740 7.4E-174 T 11-10-2018 IPR012939 Glycosyl hydrolase family 92 TF3313_2590 2b2039eafda4be6e341b5a8c21847e42 766 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 5 744 7.3E-256 T 11-10-2018 IPR005887 Alpha-1,2-mannosidase, putative TF3313_2590 2b2039eafda4be6e341b5a8c21847e42 766 SUPERFAMILY SSF48208 263 733 1.93E-37 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 TF3313_2590 2b2039eafda4be6e341b5a8c21847e42 766 Gene3D G3DSA:1.20.1050.60 354 448 4.2E-295 T 11-10-2018 TF3313_1269 76b69bc569961310cdc75c6808db31b5 543 Gene3D G3DSA:3.20.20.70 157 275 4.3E-21 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_1269 76b69bc569961310cdc75c6808db31b5 543 Pfam PF02065 Melibiase 162 271 1.0E-10 T 11-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 TF3313_1269 76b69bc569961310cdc75c6808db31b5 543 SUPERFAMILY SSF51445 175 375 8.43E-22 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily TF3313_2179 ecfb438eaf5c719a6a42d815fc3f0a01 139 Pfam PF04519 Polymer-forming cytoskeletal 19 114 5.9E-27 T 11-10-2018 IPR007607 Bactofilin A/B TF3313_1653 cdbbbe32f3e71d69e671b07b6778907a 270 SUPERFAMILY SSF100950 1 263 2.3E-104 T 11-10-2018 IPR037171 NagB/RpiA transferase-like TF3313_1653 cdbbbe32f3e71d69e671b07b6778907a 270 Gene3D G3DSA:3.40.50.1360 1 268 8.7E-118 T 11-10-2018 TF3313_1653 cdbbbe32f3e71d69e671b07b6778907a 270 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 11-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 TF3313_1653 cdbbbe32f3e71d69e671b07b6778907a 270 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 1.2E-127 T 11-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 TF3313_1653 cdbbbe32f3e71d69e671b07b6778907a 270 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 41.581 T 11-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 TF3313_1653 cdbbbe32f3e71d69e671b07b6778907a 270 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 13 224 1.1E-23 T 11-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 TF3313_1644 79097c509f6fac81cc73b8dbfbfef0b4 196 Gene3D G3DSA:1.10.1740.10 3 105 9.6E-15 T 11-10-2018 TF3313_1644 79097c509f6fac81cc73b8dbfbfef0b4 196 Gene3D G3DSA:1.10.10.10 106 182 7.2E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_1644 79097c509f6fac81cc73b8dbfbfef0b4 196 SUPERFAMILY SSF88659 100 181 5.45E-16 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TF3313_1644 79097c509f6fac81cc73b8dbfbfef0b4 196 Pfam PF04542 Sigma-70 region 2 20 83 8.0E-10 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_1644 79097c509f6fac81cc73b8dbfbfef0b4 196 SUPERFAMILY SSF88946 5 95 2.88E-20 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TF3313_1644 79097c509f6fac81cc73b8dbfbfef0b4 196 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 179 1.3E-26 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TF3313_1644 79097c509f6fac81cc73b8dbfbfef0b4 196 Pfam PF08281 Sigma-70, region 4 123 175 2.4E-15 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TF3313_1644 79097c509f6fac81cc73b8dbfbfef0b4 196 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 15 179 3.5E-48 T 11-10-2018 IPR014327 RNA polymerase sigma-70, Bacteroidetes type TF3313_0730 c9bfc1f08649428d18cb265641801d61 332 Gene3D G3DSA:1.20.1420.30 39 313 4.5E-90 T 11-10-2018 TF3313_0730 c9bfc1f08649428d18cb265641801d61 332 Gene3D G3DSA:1.20.58.1130 13 211 4.5E-90 T 11-10-2018 TF3313_0730 c9bfc1f08649428d18cb265641801d61 332 Pfam PF01699 Sodium/calcium exchanger protein 179 321 5.8E-33 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 TF3313_0730 c9bfc1f08649428d18cb265641801d61 332 Pfam PF01699 Sodium/calcium exchanger protein 9 154 2.5E-29 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 TF3313_0730 c9bfc1f08649428d18cb265641801d61 332 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 7 316 1.6E-68 T 11-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 TF3313_2200 d9d9cd80a377a25408c31a426d8ae8e4 232 Pfam PF02592 Putative vitamin uptake transporter 45 204 1.8E-47 T 11-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 TF3313_2200 d9d9cd80a377a25408c31a426d8ae8e4 232 Hamap MF_02088 Probable queuosine precursor transporter. 3 217 15.593 T 11-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 TF3313_2200 d9d9cd80a377a25408c31a426d8ae8e4 232 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 15 210 6.5E-34 T 11-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 TF3313_0868 bcdbfcd3891523ecef7e2ccbb796a071 344 PIRSF PIRSF015268 2 337 3.8E-120 T 11-10-2018 IPR011204 Virulence protein RhuM-like TF3313_0868 bcdbfcd3891523ecef7e2ccbb796a071 344 Pfam PF13310 Virulence protein RhuM family 75 309 1.4E-98 T 11-10-2018 IPR011204 Virulence protein RhuM-like TF3313_0073 768164e9bb9e1c7940836ebf6a88259c 378 Pfam PF01963 TraB family 91 376 1.4E-48 T 11-10-2018 IPR002816 Pheromone shutdown, TraB TF3313_1548 c2c90db22ef18243388b8800ee029770 593 SUPERFAMILY SSF51556 266 589 5.05E-92 T 11-10-2018 IPR032466 Metal-dependent hydrolase TF3313_1548 c2c90db22ef18243388b8800ee029770 593 Gene3D G3DSA:3.20.20.140 272 593 1.1E-119 T 11-10-2018 TF3313_1548 c2c90db22ef18243388b8800ee029770 593 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 271 586 5.6E-102 T 11-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 TF3313_1548 c2c90db22ef18243388b8800ee029770 593 SUPERFAMILY SSF52317 44 262 1.19E-36 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TF3313_1548 c2c90db22ef18243388b8800ee029770 593 Pfam PF07722 Peptidase C26 34 242 2.1E-57 T 11-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 TF3313_1548 c2c90db22ef18243388b8800ee029770 593 Gene3D G3DSA:3.40.50.880 23 271 1.2E-68 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TF3313_2913 f870bd4224ae956e0f9213251f67093e 546 SUPERFAMILY SSF48452 19 545 4.05E-84 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2913 f870bd4224ae956e0f9213251f67093e 546 Gene3D G3DSA:1.25.40.390 25 545 1.3E-84 T 11-10-2018 TF3313_2913 f870bd4224ae956e0f9213251f67093e 546 Pfam PF07980 SusD family 277 545 8.3E-25 T 11-10-2018 IPR012944 RagB/SusD domain TF3313_2913 f870bd4224ae956e0f9213251f67093e 546 Pfam PF14322 Starch-binding associating with outer membrane 22 229 2.0E-17 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_2015 a45d4a1344e04e81eeea938b0e80a95f 1127 Gene3D G3DSA:2.170.130.10 113 244 1.1E-27 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_2015 a45d4a1344e04e81eeea938b0e80a95f 1127 Gene3D G3DSA:2.60.40.1120 43 112 9.9E-8 T 11-10-2018 TF3313_2015 a45d4a1344e04e81eeea938b0e80a95f 1127 Pfam PF07715 TonB-dependent Receptor Plug Domain 135 239 7.2E-16 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_2015 a45d4a1344e04e81eeea938b0e80a95f 1127 SUPERFAMILY SSF49464 42 122 4.45E-20 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_2015 a45d4a1344e04e81eeea938b0e80a95f 1127 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 43 1127 5.1E-245 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_2015 a45d4a1344e04e81eeea938b0e80a95f 1127 Pfam PF13715 CarboxypepD_reg-like domain 44 124 2.1E-19 T 11-10-2018 TF3313_2015 a45d4a1344e04e81eeea938b0e80a95f 1127 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 215 245 2.1E-16 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_2015 a45d4a1344e04e81eeea938b0e80a95f 1127 SUPERFAMILY SSF56935 121 1127 5.49E-86 T 11-10-2018 TF3313_2015 a45d4a1344e04e81eeea938b0e80a95f 1127 Pfam PF00593 TonB dependent receptor 478 1126 4.8E-27 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_0389 30cb2543e16ce22b7e5c28ff5923d151 278 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 26 268 2.2E-15 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase TF3313_0389 30cb2543e16ce22b7e5c28ff5923d151 278 Gene3D G3DSA:3.60.10.10 21 278 2.3E-97 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TF3313_0389 30cb2543e16ce22b7e5c28ff5923d151 278 SUPERFAMILY SSF56219 22 273 8.51E-39 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TF3313_2182 e6eb5fd25d408aa206f29d4829249484 56 PRINTS PR00354 7Fe ferredoxin signature 32 49 4.7E-6 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 TF3313_2182 e6eb5fd25d408aa206f29d4829249484 56 PRINTS PR00354 7Fe ferredoxin signature 17 27 4.7E-6 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 TF3313_2182 e6eb5fd25d408aa206f29d4829249484 56 SUPERFAMILY SSF54862 1 54 2.48E-19 T 11-10-2018 TF3313_2182 e6eb5fd25d408aa206f29d4829249484 56 Pfam PF00037 4Fe-4S binding domain 31 53 2.1E-10 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TF3313_2182 e6eb5fd25d408aa206f29d4829249484 56 Pfam PF00037 4Fe-4S binding domain 3 25 3.2E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TF3313_2182 e6eb5fd25d408aa206f29d4829249484 56 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 37 48 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TF3313_2182 e6eb5fd25d408aa206f29d4829249484 56 Gene3D G3DSA:3.30.70.20 2 55 9.0E-22 T 11-10-2018 TF3313_0587 93af45e24bbb6f66ebf723336fab6fc1 258 Gene3D G3DSA:1.10.4080.10 1 256 7.8E-55 T 11-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily TF3313_0587 93af45e24bbb6f66ebf723336fab6fc1 258 SUPERFAMILY SSF101478 1 228 8.63E-53 T 11-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily TF3313_0587 93af45e24bbb6f66ebf723336fab6fc1 258 Pfam PF03747 ADP-ribosylglycohydrolase 1 227 5.6E-35 T 11-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 TF3313_1754 4200fad75aca924b70aad17e1c4cf386 180 Gene3D G3DSA:1.20.1440.20 17 180 2.6E-42 T 11-10-2018 IPR023353 LemA-like domain superfamily TF3313_1754 4200fad75aca924b70aad17e1c4cf386 180 Pfam PF04011 LemA family 5 179 3.6E-48 T 11-10-2018 IPR007156 LemA TF3313_1754 4200fad75aca924b70aad17e1c4cf386 180 SUPERFAMILY SSF140478 24 170 1.02E-38 T 11-10-2018 IPR023353 LemA-like domain superfamily TF3313_1443 2d2c392f97dabed000697995545353b6 166 Pfam PF06414 Zeta toxin 27 109 4.9E-5 T 11-10-2018 IPR010488 Zeta toxin domain GO:0005524|GO:0016301 TF3313_1443 2d2c392f97dabed000697995545353b6 166 Gene3D G3DSA:3.40.50.300 6 163 4.5E-13 T 11-10-2018 TF3313_1443 2d2c392f97dabed000697995545353b6 166 SUPERFAMILY SSF52540 6 143 5.32E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1966 878edec7c6c1e4a1ad20b7bae9da63e3 339 SUPERFAMILY SSF56219 30 333 3.4E-28 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TF3313_1966 878edec7c6c1e4a1ad20b7bae9da63e3 339 Gene3D G3DSA:3.60.10.10 26 334 1.0E-20 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TF3313_0080 7ef3b1158eb69ae1e08cb7f2cf516203 153 Pfam PF13384 Homeodomain-like domain 56 96 7.0E-6 T 11-10-2018 TF3313_0080 7ef3b1158eb69ae1e08cb7f2cf516203 153 SUPERFAMILY SSF46689 56 97 7.89E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TF3313_2543 d493300d775036b3e7080d43d29c1d3a 341 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 21 339 6.3E-47 T 11-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 TF3313_2543 d493300d775036b3e7080d43d29c1d3a 341 Gene3D G3DSA:1.10.8.60 145 213 1.9E-9 T 11-10-2018 TF3313_2543 d493300d775036b3e7080d43d29c1d3a 341 Gene3D G3DSA:1.20.272.10 214 341 1.2E-12 T 11-10-2018 TF3313_2543 d493300d775036b3e7080d43d29c1d3a 341 Gene3D G3DSA:3.40.50.300 8 138 2.6E-31 T 11-10-2018 TF3313_2543 d493300d775036b3e7080d43d29c1d3a 341 SUPERFAMILY SSF52540 15 209 1.06E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2543 d493300d775036b3e7080d43d29c1d3a 341 Pfam PF06144 DNA polymerase III, delta subunit 24 189 6.4E-23 T 11-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 TF3313_2228 0ed483d938b0a690995b3b459fbbb82b 335 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 201 327 2.4E-7 T 11-10-2018 IPR018728 Domain of unknown function DUF2268 TF3313_2228 0ed483d938b0a690995b3b459fbbb82b 335 TIGRFAM TIGR03514 GldB_lipo: gliding motility-associated lipoprotein GldB 13 335 1.2E-111 T 11-10-2018 IPR019853 Gliding motility-associated lipoprotein, GldB TF3313_2415 7a5c24c995182858caa44d6faedcf0bc 190 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 1 189 4.1E-89 T 11-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 TF3313_2415 7a5c24c995182858caa44d6faedcf0bc 190 Pfam PF02508 Rnf-Nqr subunit, membrane protein 3 189 1.5E-65 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 TF3313_2415 7a5c24c995182858caa44d6faedcf0bc 190 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 1 190 26.162 T 11-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 TF3313_2415 7a5c24c995182858caa44d6faedcf0bc 190 PIRSF PIRSF006102 1 190 4.0E-61 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 TF3313_1401 a51d2368b5c580fc74d8693780910604 229 Pfam PF13884 Chaperone of endosialidase 9 80 1.3E-6 T 11-10-2018 IPR030392 Intramolecular chaperone auto-processing domain TF3313_1044 55d2472d65cf35efc0922dfced643126 1252 SUPERFAMILY SSF51126 739 1081 8.97E-23 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor TF3313_1044 55d2472d65cf35efc0922dfced643126 1252 Gene3D G3DSA:2.160.20.10 729 1081 1.7E-10 T 11-10-2018 IPR012334 Pectin lyase fold TF3313_1976 6e9c14681d32b99235fce68e39d7f4ce 791 Pfam PF10101 Predicted membrane protein (DUF2339) 150 772 8.6E-76 T 11-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane TF3313_0334 1ac7ddc59d89d7a405fa41820edebaf1 586 SUPERFAMILY SSF48452 18 585 6.45E-81 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0334 1ac7ddc59d89d7a405fa41820edebaf1 586 Gene3D G3DSA:1.25.40.390 34 585 2.1E-91 T 11-10-2018 TF3313_0334 1ac7ddc59d89d7a405fa41820edebaf1 586 Pfam PF07980 SusD family 267 585 1.3E-28 T 11-10-2018 IPR012944 RagB/SusD domain TF3313_0334 1ac7ddc59d89d7a405fa41820edebaf1 586 Pfam PF14322 Starch-binding associating with outer membrane 68 220 1.2E-12 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_0409 ce115c26ba4c7613ae522dca5a2ef768 135 SUPERFAMILY SSF55961 9 130 2.31E-9 T 11-10-2018 TF3313_0749 29231e0f0a8dc254dbaeeed5a1cdefcd 283 Pfam PF09697 Protein of unknown function (Porph_ging) 163 186 4.7E-6 T 11-10-2018 IPR005901 GLPGLI family protein TF3313_0749 29231e0f0a8dc254dbaeeed5a1cdefcd 283 TIGRFAM TIGR01200 GLPGLI: GLPGLI family protein 3 214 2.3E-46 T 11-10-2018 IPR005901 GLPGLI family protein TF3313_2264 69fcf029d5df4cb848968d380546bc10 198 Pfam PF12760 Transposase zinc-ribbon domain 11 55 6.1E-7 T 11-10-2018 IPR024442 Transposase, zinc-ribbon TF3313_0396 d7e2d05af9240f0b0bb4485c11cbe8a0 452 Pfam PF02321 Outer membrane efflux protein 42 232 2.0E-31 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TF3313_0396 d7e2d05af9240f0b0bb4485c11cbe8a0 452 Pfam PF02321 Outer membrane efflux protein 258 440 1.1E-27 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TF3313_0396 d7e2d05af9240f0b0bb4485c11cbe8a0 452 SUPERFAMILY SSF56954 11 447 3.92E-82 T 11-10-2018 TF3313_0396 d7e2d05af9240f0b0bb4485c11cbe8a0 452 Gene3D G3DSA:1.20.1600.10 27 445 2.7E-88 T 11-10-2018 TF3313_1345 a426c796370e69abb819ac0c5f3472d0 157 SUPERFAMILY SSF55781 12 153 4.32E-39 T 11-10-2018 TF3313_1345 a426c796370e69abb819ac0c5f3472d0 157 Pfam PF13185 GAF domain 42 153 1.3E-10 T 11-10-2018 IPR003018 GAF domain GO:0005515 TF3313_1345 a426c796370e69abb819ac0c5f3472d0 157 Gene3D G3DSA:3.30.450.40 11 156 1.8E-55 T 11-10-2018 IPR029016 GAF-like domain superfamily TF3313_1825 e0903703c947b31bc9c6acb932ce6400 769 Gene3D G3DSA:2.40.160.50 444 751 3.0E-28 T 11-10-2018 TF3313_1825 e0903703c947b31bc9c6acb932ce6400 769 Pfam PF01103 Surface antigen 512 751 2.2E-23 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 TF3313_0872 73fee3689796f01feed4e136912f4394 563 Gene3D G3DSA:1.25.40.10 336 550 4.9E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0872 73fee3689796f01feed4e136912f4394 563 SUPERFAMILY SSF48452 375 530 1.77E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0818 74f1b6a7dbf3792f6e4b0487ca64fde6 504 Pfam PF03321 GH3 auxin-responsive promoter 19 493 3.6E-108 T 11-10-2018 IPR004993 GH3 family Reactome: R-HSA-6798695 TF3313_0818 74f1b6a7dbf3792f6e4b0487ca64fde6 504 Gene3D G3DSA:3.40.50.12780 23 367 7.3E-7 T 11-10-2018 TF3313_2909 b67cc9faa264ce6863376b1e56ae48a3 423 Pfam PF09861 Domain of unknown function (DUF2088) 30 179 4.8E-9 T 11-10-2018 IPR018657 LarA-like, N-terminal GO:0050043 KEGG: 00620+5.1.2.1 TF3313_2909 b67cc9faa264ce6863376b1e56ae48a3 423 Gene3D G3DSA:3.90.226.30 254 417 7.3E-40 T 11-10-2018 TF3313_2909 b67cc9faa264ce6863376b1e56ae48a3 423 Gene3D G3DSA:3.40.50.11440 3 253 1.5E-68 T 11-10-2018 TF3313_2263 6043ab766ac86c6a214695eb55bc6245 71 Pfam PF12762 ISXO2-like transposase domain 6 43 3.1E-7 T 11-10-2018 IPR024445 ISXO2-like transposase domain TF3313_2781 6043ab766ac86c6a214695eb55bc6245 71 Pfam PF12762 ISXO2-like transposase domain 6 43 3.1E-7 T 11-10-2018 IPR024445 ISXO2-like transposase domain TF3313_0058 6043ab766ac86c6a214695eb55bc6245 71 Pfam PF12762 ISXO2-like transposase domain 6 43 3.1E-7 T 11-10-2018 IPR024445 ISXO2-like transposase domain TF3313_0113 210e1476dcb8ac8684589ba5f42c6900 144 Gene3D G3DSA:2.40.128.640 39 144 5.8E-34 T 11-10-2018 TF3313_0113 210e1476dcb8ac8684589ba5f42c6900 144 Pfam PF04170 NlpE N-terminal domain 50 133 9.4E-27 T 11-10-2018 IPR007298 Copper resistance lipoprotein NlpE TF3313_0307 c36571cc2cfa22fcd4a6233c92718457 370 Pfam PF17170 6-bladed beta-propeller 8 302 1.1E-25 T 11-10-2018 TF3313_2932 33aeac725f0b74ee9440c9d72eee3715 192 SUPERFAMILY SSF51161 13 191 2.36E-48 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily TF3313_2932 33aeac725f0b74ee9440c9d72eee3715 192 Gene3D G3DSA:2.160.10.10 6 192 1.7E-58 T 11-10-2018 TF3313_2932 33aeac725f0b74ee9440c9d72eee3715 192 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 137 172 2.2E-11 T 11-10-2018 IPR001451 Hexapeptide repeat TF3313_2523 a8e05e162b4eb5aa176735b33779112f 615 Pfam PF13584 Oxygen tolerance 23 521 3.2E-163 T 11-10-2018 IPR025738 Aerotolerance-related protein BatD TF3313_2013 f30231acce19ad7ad19ee060fd76d479 392 Gene3D G3DSA:1.50.10.10 2 392 4.4E-131 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 TF3313_2013 f30231acce19ad7ad19ee060fd76d479 392 SUPERFAMILY SSF48208 9 390 3.85E-104 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 TF3313_2013 f30231acce19ad7ad19ee060fd76d479 392 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 37 367 1.5E-50 T 11-10-2018 TF3313_0480 1ba94fa743c5f14b6a28870cac989d4e 144 Pfam PF15418 Domain of unknown function (DUF4625) 4 129 5.0E-44 T 11-10-2018 IPR027829 Protein of unknown function DUF4625 TF3313_2017 4e65a1c6e6a84276175375688c368c48 539 Gene3D G3DSA:2.120.10.10 181 539 2.0E-145 T 11-10-2018 TF3313_2017 4e65a1c6e6a84276175375688c368c48 539 Pfam PF14873 N-terminal domain of BNR-repeat neuraminidase 20 169 1.2E-49 T 11-10-2018 IPR029456 Sialidase, N-terminal KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 TF3313_2017 4e65a1c6e6a84276175375688c368c48 539 Pfam PF13088 BNR repeat-like domain 227 509 4.5E-29 T 11-10-2018 IPR011040 Sialidase KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 TF3313_2017 4e65a1c6e6a84276175375688c368c48 539 Gene3D G3DSA:2.60.40.1290 19 179 2.2E-52 T 11-10-2018 TF3313_2017 4e65a1c6e6a84276175375688c368c48 539 SUPERFAMILY SSF50939 187 537 8.69E-90 T 11-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 TF3313_0054 db1be6c960a206741be400cc91e1f438 412 SUPERFAMILY SSF102114 128 391 7.46E-9 T 11-10-2018 TF3313_0054 db1be6c960a206741be400cc91e1f438 412 Gene3D G3DSA:3.20.20.70 121 350 1.4E-7 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_0054 db1be6c960a206741be400cc91e1f438 412 TIGRFAM TIGR04150 pseudo_rSAM_GG: pseudo-rSAM protein, GG-Bacteroidales system 10 409 2.7E-108 T 11-10-2018 IPR026418 Pseudo-rSAM protein, GG-Bacteroidales system TF3313_0169 99cf868734cac7a030f5ac77422cfcd4 187 Pfam PF03787 RAMP superfamily 7 177 2.6E-8 T 11-10-2018 IPR005537 CRISPR type III-associated RAMP protein TF3313_0554 6c8dc06b1bec0c5e6addd3e7a8bfdee7 106 SUPERFAMILY SSF47413 46 77 3.85E-5 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TF3313_1324 01031686dab45654c635e506c998d785 172 SUPERFAMILY SSF111384 20 168 6.54E-30 T 11-10-2018 TF3313_1324 01031686dab45654c635e506c998d785 172 Gene3D G3DSA:3.30.910.20 14 172 2.3E-33 T 11-10-2018 IPR024930 Skp domain superfamily TF3313_1324 01031686dab45654c635e506c998d785 172 SMART SM00935 9 169 1.8E-49 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 TF3313_1324 01031686dab45654c635e506c998d785 172 Pfam PF03938 Outer membrane protein (OmpH-like) 10 168 5.0E-39 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 TF3313_2584 db70a0a27b76a9721db47ed57f200153 550 Gene3D G3DSA:3.90.930.1 458 549 5.0E-11 T 11-10-2018 TF3313_2584 db70a0a27b76a9721db47ed57f200153 550 Pfam PF11832 Protein of unknown function (DUF3352) 270 400 9.3E-9 T 11-10-2018 IPR021787 Protein of unknown function DUF3352 TF3313_2584 db70a0a27b76a9721db47ed57f200153 550 Pfam PF11832 Protein of unknown function (DUF3352) 15 311 3.7E-9 T 11-10-2018 IPR021787 Protein of unknown function DUF3352 TF3313_2584 db70a0a27b76a9721db47ed57f200153 550 SUPERFAMILY SSF82185 487 543 1.57E-9 T 11-10-2018 TF3313_2672 f094f8f5c93aa6a3eca8a1796e9da3d8 455 Gene3D G3DSA:1.25.40.10 283 421 4.9E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2672 f094f8f5c93aa6a3eca8a1796e9da3d8 455 SUPERFAMILY SSF48452 288 410 4.56E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2672 f094f8f5c93aa6a3eca8a1796e9da3d8 455 SMART SM00028 292 325 13.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_2672 f094f8f5c93aa6a3eca8a1796e9da3d8 455 SMART SM00028 329 362 1.2 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_1972 8df25d6bf9fe8eb26d872f6ad23ada85 180 Gene3D G3DSA:3.40.50.2020 1 180 3.5E-51 T 11-10-2018 TF3313_1972 8df25d6bf9fe8eb26d872f6ad23ada85 180 Pfam PF00156 Phosphoribosyl transferase domain 20 164 1.3E-21 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 TF3313_1972 8df25d6bf9fe8eb26d872f6ad23ada85 180 SUPERFAMILY SSF53271 5 177 1.08E-42 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like TF3313_0171 2e3a9542f87047115bff9e121e754185 472 Pfam PF03787 RAMP superfamily 20 196 1.3E-16 T 11-10-2018 IPR005537 CRISPR type III-associated RAMP protein TF3313_0171 2e3a9542f87047115bff9e121e754185 472 Pfam PF03787 RAMP superfamily 280 461 1.7E-18 T 11-10-2018 IPR005537 CRISPR type III-associated RAMP protein TF3313_0976 259c78c48a63a23f6417a5c3d5086b69 420 Pfam PF13439 Glycosyltransferase Family 4 13 220 1.6E-11 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 TF3313_0976 259c78c48a63a23f6417a5c3d5086b69 420 SUPERFAMILY SSF53756 6 419 2.88E-59 T 11-10-2018 TF3313_0976 259c78c48a63a23f6417a5c3d5086b69 420 Gene3D G3DSA:3.40.50.2000 13 411 5.2E-44 T 11-10-2018 TF3313_0976 259c78c48a63a23f6417a5c3d5086b69 420 Pfam PF00534 Glycosyl transferases group 1 232 396 6.5E-24 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 TF3313_0976 259c78c48a63a23f6417a5c3d5086b69 420 Gene3D G3DSA:3.40.50.2000 219 402 5.2E-44 T 11-10-2018 TF3313_0528 6d63351a7418ed4e9981460c056c6b15 566 SUPERFAMILY SSF56935 308 564 1.15E-5 T 11-10-2018 TF3313_1632 24f2513dc45a6bfddde6918edfb1fa03 285 SUPERFAMILY SSF51735 7 259 2.81E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_1632 24f2513dc45a6bfddde6918edfb1fa03 285 Gene3D G3DSA:3.40.50.720 5 263 4.6E-30 T 11-10-2018 TF3313_1632 24f2513dc45a6bfddde6918edfb1fa03 285 PIRSF PIRSF000094 3 264 1.2E-46 T 11-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 TF3313_1632 24f2513dc45a6bfddde6918edfb1fa03 285 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 256 1.9E-54 T 11-10-2018 TF3313_1528 61953829ea199115a4a74c0f4da09c1b 485 Pfam PF01458 Uncharacterized protein family (UPF0051) 223 456 1.8E-66 T 11-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 TF3313_1528 61953829ea199115a4a74c0f4da09c1b 485 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 19 476 5.0E-195 T 11-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 TF3313_1528 61953829ea199115a4a74c0f4da09c1b 485 SUPERFAMILY SSF101960 40 482 1.44E-136 T 11-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily TF3313_2107 93c0c3ddfbf5b2da68dfadaad130cde0 101 Pfam PF01609 Transposase DDE domain 1 45 4.0E-6 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 TF3313_2107 93c0c3ddfbf5b2da68dfadaad130cde0 101 SUPERFAMILY SSF53098 1 50 9.1E-11 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TF3313_0538 dfa5270d4c13591cbf314b9c960836c5 258 SUPERFAMILY SSF69618 6 245 6.67E-45 T 11-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TF3313_0538 dfa5270d4c13591cbf314b9c960836c5 258 Pfam PF02602 Uroporphyrinogen-III synthase HemD 26 238 2.0E-40 T 11-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TF3313_0538 dfa5270d4c13591cbf314b9c960836c5 258 Gene3D G3DSA:3.40.50.10090 39 170 9.2E-23 T 11-10-2018 TF3313_0538 dfa5270d4c13591cbf314b9c960836c5 258 Gene3D G3DSA:3.40.50.10090 20 237 9.2E-23 T 11-10-2018 TF3313_0950 7ef7c31bf17c2428ce345acb0cb7a28c 138 PIRSF PIRSF004681 1 138 1.5E-38 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 TF3313_0950 7ef7c31bf17c2428ce345acb0cb7a28c 138 Pfam PF01894 Uncharacterised protein family UPF0047 20 135 4.3E-35 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 TF3313_0950 7ef7c31bf17c2428ce345acb0cb7a28c 138 Gene3D G3DSA:2.60.120.460 1 138 5.5E-49 T 11-10-2018 IPR035917 YjbQ-like superfamily TF3313_0950 7ef7c31bf17c2428ce345acb0cb7a28c 138 SUPERFAMILY SSF111038 1 138 1.31E-44 T 11-10-2018 IPR035917 YjbQ-like superfamily TF3313_0950 7ef7c31bf17c2428ce345acb0cb7a28c 138 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 14 138 8.3E-34 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 TF3313_1702 1bd02efe197869106e77607e77ccd7c8 634 Gene3D G3DSA:2.180.10.10 33 330 2.8E-17 T 11-10-2018 TF3313_1702 1bd02efe197869106e77607e77ccd7c8 634 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 241 330 6.8E-18 T 11-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 TF3313_1835 da5103e3d87920f3d09c95e9c3865c0f 83 Pfam PF16022 Domain of unknown function (DUF4783) 1 83 3.3E-20 T 11-10-2018 IPR031977 Protein of unknown function DUF4783 TF3313_1835 da5103e3d87920f3d09c95e9c3865c0f 83 Gene3D G3DSA:3.10.450.50 1 83 8.3E-24 T 11-10-2018 TF3313_0172 dfc454b5efc9fb86f84588ed2611b5b9 128 TIGRFAM TIGR04423 casT3_TIGR04423: CRISPR type III-associated protein, TIGR04423 family 7 124 7.9E-38 T 11-10-2018 IPR030955 CRISPR type III-associated protein, CHP04423 family TF3313_0668 2d3bac4fbe66691744bfb5a536d0888e 151 Pfam PF00583 Acetyltransferase (GNAT) family 35 115 2.5E-17 T 11-10-2018 IPR000182 GNAT domain TF3313_0668 2d3bac4fbe66691744bfb5a536d0888e 151 Gene3D G3DSA:3.40.630.30 6 151 2.9E-40 T 11-10-2018 TF3313_0668 2d3bac4fbe66691744bfb5a536d0888e 151 SUPERFAMILY SSF55729 20 150 3.86E-26 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TF3313_0009 43f3c300e0aa1355c2fe6c7b9b06ccd6 571 Gene3D G3DSA:3.40.50.1110 176 361 2.4E-56 T 11-10-2018 IPR036514 SGNH hydrolase superfamily TF3313_0009 43f3c300e0aa1355c2fe6c7b9b06ccd6 571 SUPERFAMILY SSF52266 367 570 1.68E-41 T 11-10-2018 TF3313_0009 43f3c300e0aa1355c2fe6c7b9b06ccd6 571 Pfam PF14606 GDSL-like Lipase/Acylhydrolase family 177 353 2.2E-51 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain TF3313_0009 43f3c300e0aa1355c2fe6c7b9b06ccd6 571 Pfam PF14607 N-terminus of Esterase_SGNH_hydro-type 22 168 1.4E-46 T 11-10-2018 IPR032740 SGNH hydrolase-type esterase, N-terminal TF3313_0009 43f3c300e0aa1355c2fe6c7b9b06ccd6 571 Gene3D G3DSA:3.40.50.1110 362 571 6.5E-43 T 11-10-2018 IPR036514 SGNH hydrolase superfamily TF3313_0009 43f3c300e0aa1355c2fe6c7b9b06ccd6 571 Gene3D G3DSA:2.60.120.260 18 173 7.9E-49 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_0009 43f3c300e0aa1355c2fe6c7b9b06ccd6 571 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 402 564 4.0E-16 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain TF3313_0009 43f3c300e0aa1355c2fe6c7b9b06ccd6 571 SUPERFAMILY SSF52266 178 357 4.73E-17 T 11-10-2018 TF3313_2115 e2e20dbe77d5ff9bf348338f500a04d5 443 Pfam PF02601 Exonuclease VII, large subunit 149 437 1.2E-73 T 11-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 TF3313_2115 e2e20dbe77d5ff9bf348338f500a04d5 443 Pfam PF13742 OB-fold nucleic acid binding domain 15 124 1.7E-16 T 11-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 TF3313_2115 e2e20dbe77d5ff9bf348338f500a04d5 443 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 16 440 4.4E-96 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 TF3313_1917 f614533db912e9fc37645f1d4bd86d24 875 SUPERFAMILY SSF56935 104 875 1.22E-8 T 11-10-2018 TF3313_1917 f614533db912e9fc37645f1d4bd86d24 875 Gene3D G3DSA:2.60.40.1120 26 109 4.9E-6 T 11-10-2018 TF3313_1917 f614533db912e9fc37645f1d4bd86d24 875 Pfam PF13620 Carboxypeptidase regulatory-like domain 27 106 3.4E-8 T 11-10-2018 TF3313_1917 f614533db912e9fc37645f1d4bd86d24 875 SUPERFAMILY SSF49464 25 116 1.83E-9 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_2460 071bfc1fa1b093898299465dbdfb17de 551 SUPERFAMILY SSF50998 251 471 1.69E-5 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily TF3313_2460 071bfc1fa1b093898299465dbdfb17de 551 Pfam PF16410 Domain of unknown function (DUF5018) 13 356 6.6E-126 T 11-10-2018 IPR032186 Domain of unknown function DUF5018 TF3313_2460 071bfc1fa1b093898299465dbdfb17de 551 Gene3D G3DSA:2.60.40.2340 134 222 2.4E-17 T 11-10-2018 TF3313_2613 f76b15b2858cdd1043afb8ed1ac3bd9c 468 SUPERFAMILY SSF53955 291 459 1.89E-32 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily TF3313_2613 f76b15b2858cdd1043afb8ed1ac3bd9c 468 Gene3D G3DSA:1.10.530.10 289 467 4.2E-38 T 11-10-2018 TF3313_2613 f76b15b2858cdd1043afb8ed1ac3bd9c 468 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 60 269 3.9E-18 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TF3313_2613 f76b15b2858cdd1043afb8ed1ac3bd9c 468 Pfam PF01464 Transglycosylase SLT domain 295 406 5.8E-19 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 TF3313_2613 f76b15b2858cdd1043afb8ed1ac3bd9c 468 Gene3D G3DSA:3.40.190.10 129 229 1.9E-58 T 11-10-2018 TF3313_2613 f76b15b2858cdd1043afb8ed1ac3bd9c 468 Gene3D G3DSA:3.40.190.10 39 262 1.9E-58 T 11-10-2018 TF3313_2613 f76b15b2858cdd1043afb8ed1ac3bd9c 468 SUPERFAMILY SSF53850 36 272 7.24E-28 T 11-10-2018 TF3313_2613 f76b15b2858cdd1043afb8ed1ac3bd9c 468 SMART SM00062 49 272 2.9E-8 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TF3313_0287 9714994555645edcd770fa3bf9ebe433 306 Pfam PF13280 WYL domain 120 299 2.1E-31 T 11-10-2018 IPR026881 WYL domain TF3313_2267 85aa294f35ce3f4b45e1c5047c2d6668 163 SUPERFAMILY SSF53098 1 162 3.11E-42 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TF3313_2267 85aa294f35ce3f4b45e1c5047c2d6668 163 SMART SM00479 3 163 3.1E-9 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III TF3313_2267 85aa294f35ce3f4b45e1c5047c2d6668 163 Pfam PF00929 Exonuclease 5 158 3.2E-19 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III TF3313_2267 85aa294f35ce3f4b45e1c5047c2d6668 163 Gene3D G3DSA:3.30.420.10 1 163 4.5E-37 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TF3313_1927 bbb481d2b9b533788e6f267fd3e960ee 116 Pfam PF06713 Bacterial PH domain 18 95 4.4E-17 T 11-10-2018 IPR009589 Sublancin immunity protein SunI GO:0030153 TF3313_0146 50c1a43fa834c226b9bf11723ed3189f 334 Pfam PF07949 YbbR-like protein 158 237 3.1E-5 T 11-10-2018 IPR012505 YbbR-like TF3313_0146 50c1a43fa834c226b9bf11723ed3189f 334 Gene3D G3DSA:2.170.120.40 154 240 2.3E-8 T 11-10-2018 TF3313_2449 4c94d55b111f2b25fb83bf12170389ae 581 SUPERFAMILY SSF48452 19 577 2.02E-90 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2449 4c94d55b111f2b25fb83bf12170389ae 581 Gene3D G3DSA:1.25.40.390 29 577 5.6E-73 T 11-10-2018 TF3313_2449 4c94d55b111f2b25fb83bf12170389ae 581 Pfam PF14322 Starch-binding associating with outer membrane 81 230 2.5E-14 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_2449 4c94d55b111f2b25fb83bf12170389ae 581 Pfam PF07980 SusD family 423 577 6.6E-21 T 11-10-2018 IPR012944 RagB/SusD domain TF3313_0288 7090df42b68c18f47c6ce7c84ee37aa3 401 Pfam PF09594 Glycosyltransferase family 87 72 300 3.7E-26 T 11-10-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 TF3313_1539 a1fa8250e2012c66587670e62ca7b593 144 Pfam PF00011 Hsp20/alpha crystallin family 38 143 1.9E-21 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain TF3313_1539 a1fa8250e2012c66587670e62ca7b593 144 SUPERFAMILY SSF49764 11 137 4.88E-31 T 11-10-2018 IPR008978 HSP20-like chaperone TF3313_1539 a1fa8250e2012c66587670e62ca7b593 144 Gene3D G3DSA:2.60.40.790 5 143 4.3E-34 T 11-10-2018 IPR008978 HSP20-like chaperone TF3313_0245 eabd10e61c393b3f40694b056fb1245f 79 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 71 16.771 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_0245 eabd10e61c393b3f40694b056fb1245f 79 Gene3D G3DSA:2.30.170.40 2 77 1.2E-25 T 11-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_0245 eabd10e61c393b3f40694b056fb1245f 79 Pfam PF00830 Ribosomal L28 family 3 61 3.1E-21 T 11-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_0245 eabd10e61c393b3f40694b056fb1245f 79 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 9.7E-23 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_0245 eabd10e61c393b3f40694b056fb1245f 79 SUPERFAMILY SSF143800 2 74 8.24E-25 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_0278 00b0c7ee589dfaafe5a7be9932c08213 472 Pfam PF14092 Domain of unknown function (DUF4270) 28 468 2.2E-71 T 11-10-2018 IPR025366 Protein of unknown function DUF4270 TF3313_2257 e4b4f86ca6f23eb6554184f04bd28443 104 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 24 58 3.8E-4 T 11-10-2018 IPR006530 YD repeat TF3313_1473 e6ff4f0aaa11c6cd21edcb035f1c9ba8 273 Pfam PF02535 ZIP Zinc transporter 130 267 1.4E-21 T 11-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 TF3313_1473 e6ff4f0aaa11c6cd21edcb035f1c9ba8 273 Hamap MF_00548 Zinc transporter ZupT [zupT]. 5 273 34.288 T 11-10-2018 IPR023498 Zinc transporter ZupT TF3313_1524 ab412e7d503e2f133dd9a50148462150 150 Gene3D G3DSA:3.30.300.70 1 68 6.1E-7 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily TF3313_1524 ab412e7d503e2f133dd9a50148462150 150 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 4 149 14.502 T 11-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 TF3313_1524 ab412e7d503e2f133dd9a50148462150 150 SUPERFAMILY SSF75420 3 70 4.58E-10 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily TF3313_1524 ab412e7d503e2f133dd9a50148462150 150 Pfam PF02576 RimP N-terminal domain 7 70 7.3E-9 T 11-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal TF3313_1934 ea1494e8c231299027f57a0fe9e01485 1280 Gene3D G3DSA:3.40.50.300 691 900 9.7E-13 T 11-10-2018 TF3313_1934 ea1494e8c231299027f57a0fe9e01485 1280 SUPERFAMILY SSF52540 697 862 3.47E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_1667 5bc5ac99999a691c66b07afa05fa500a 434 Gene3D G3DSA:1.20.1250.20 5 193 4.8E-10 T 11-10-2018 TF3313_1667 5bc5ac99999a691c66b07afa05fa500a 434 Gene3D G3DSA:1.20.1250.20 204 424 1.4E-30 T 11-10-2018 TF3313_1667 5bc5ac99999a691c66b07afa05fa500a 434 Pfam PF03825 Nucleoside H+ symporter 1 417 4.8E-113 T 11-10-2018 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 TF3313_1667 5bc5ac99999a691c66b07afa05fa500a 434 SUPERFAMILY SSF103473 6 418 1.57E-27 T 11-10-2018 IPR036259 MFS transporter superfamily TF3313_2957 bb953785f97effe4b1addf82b395a93e 380 SMART SM00646 92 251 4.0E-32 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 TF3313_2957 bb953785f97effe4b1addf82b395a93e 380 SUPERFAMILY SSF53187 30 253 2.57E-47 T 11-10-2018 TF3313_2957 bb953785f97effe4b1addf82b395a93e 380 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 32 250 2.3E-54 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 TF3313_2957 bb953785f97effe4b1addf82b395a93e 380 Gene3D G3DSA:3.40.630.40 22 262 5.7E-75 T 11-10-2018 TF3313_2639 56af8cba80cffc6f5c7038a52bb248cc 221 SUPERFAMILY SSF50324 17 214 7.98E-53 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 TF3313_2639 56af8cba80cffc6f5c7038a52bb248cc 221 Gene3D G3DSA:3.90.80.10 22 212 1.1E-50 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 TF3313_2639 56af8cba80cffc6f5c7038a52bb248cc 221 Pfam PF00719 Inorganic pyrophosphatase 38 210 3.1E-44 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 TF3313_1170 2fe6c6a8cb1f66661326bd4db704db17 422 Pfam PF02547 Queuosine biosynthesis protein 26 421 7.3E-95 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 TF3313_1170 2fe6c6a8cb1f66661326bd4db704db17 422 Gene3D G3DSA:3.40.1780.10 37 301 1.5E-61 T 11-10-2018 TF3313_1170 2fe6c6a8cb1f66661326bd4db704db17 422 Gene3D G3DSA:2.40.10.240 84 202 1.5E-61 T 11-10-2018 TF3313_1170 2fe6c6a8cb1f66661326bd4db704db17 422 Gene3D G3DSA:3.40.1780.10 334 422 1.5E-24 T 11-10-2018 TF3313_1170 2fe6c6a8cb1f66661326bd4db704db17 422 SUPERFAMILY SSF111337 24 422 9.59E-98 T 11-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 TF3313_0452 a65f49e62b06a8e2cae1daba45903f07 493 SMART SM00710 243 264 13.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat TF3313_0452 a65f49e62b06a8e2cae1daba45903f07 493 SMART SM00710 330 355 10000.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat TF3313_0452 a65f49e62b06a8e2cae1daba45903f07 493 SMART SM00710 377 398 420.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat TF3313_0452 a65f49e62b06a8e2cae1daba45903f07 493 SMART SM00710 215 236 220.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat TF3313_0452 a65f49e62b06a8e2cae1daba45903f07 493 SMART SM00710 270 292 1700.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat TF3313_0452 a65f49e62b06a8e2cae1daba45903f07 493 SMART SM00710 189 214 6700.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat TF3313_0452 a65f49e62b06a8e2cae1daba45903f07 493 SUPERFAMILY SSF51126 5 392 2.06E-67 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor TF3313_0452 a65f49e62b06a8e2cae1daba45903f07 493 Pfam PF00295 Glycosyl hydrolases family 28 84 282 7.7E-14 T 11-10-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 TF3313_0452 a65f49e62b06a8e2cae1daba45903f07 493 Gene3D G3DSA:2.160.20.10 10 414 2.3E-84 T 11-10-2018 IPR012334 Pectin lyase fold TF3313_1625 8f529940f6927a0f6b32d9b21b23965f 129 SUPERFAMILY SSF49373 21 70 2.9E-7 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments TF3313_1625 8f529940f6927a0f6b32d9b21b23965f 129 Gene3D G3DSA:2.60.40.1080 20 93 2.1E-7 T 11-10-2018 TF3313_1625 8f529940f6927a0f6b32d9b21b23965f 129 Pfam PF02368 Bacterial Ig-like domain (group 2) 29 70 4.7E-5 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 TF3313_2095 582a5b862df9ed9e8622c9f5e0039ec1 346 Pfam PF00294 pfkB family carbohydrate kinase 3 323 2.7E-30 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB TF3313_2095 582a5b862df9ed9e8622c9f5e0039ec1 346 SUPERFAMILY SSF53613 1 336 3.27E-74 T 11-10-2018 IPR029056 Ribokinase-like TF3313_2095 582a5b862df9ed9e8622c9f5e0039ec1 346 Gene3D G3DSA:3.40.1190.20 1 345 1.2E-127 T 11-10-2018 IPR029056 Ribokinase-like TF3313_2578 8a087dccfde74ab5a42aac862963e29b 203 Pfam PF01252 Signal peptidase (SPase) II 12 191 5.6E-33 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TF3313_2578 8a087dccfde74ab5a42aac862963e29b 203 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 4 199 13.461 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TF3313_2578 8a087dccfde74ab5a42aac862963e29b 203 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 50 58 2.1E-14 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TF3313_2578 8a087dccfde74ab5a42aac862963e29b 203 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 174 190 2.1E-14 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TF3313_2578 8a087dccfde74ab5a42aac862963e29b 203 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 96 111 2.1E-14 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TF3313_2724 9cea9816ccace6f9c2df630811f3484f 211 Pfam PF16109 Domain of unknown function (DUF4827) 40 206 6.5E-35 T 11-10-2018 IPR032252 Protein of unknown function DUF4827 TF3313_2724 9cea9816ccace6f9c2df630811f3484f 211 Gene3D G3DSA:3.10.50.40 46 211 1.9E-51 T 11-10-2018 TF3313_1585 a7df99fcf67846f4ff5b73b78b4e8716 393 Gene3D G3DSA:1.10.10.1110 1 65 4.5E-6 T 11-10-2018 TF3313_1585 a7df99fcf67846f4ff5b73b78b4e8716 393 SUPERFAMILY SSF53335 36 197 5.33E-16 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_1585 a7df99fcf67846f4ff5b73b78b4e8716 393 Gene3D G3DSA:3.40.50.150 66 254 8.3E-58 T 11-10-2018 TF3313_2555 39c8f38ac25029550963ff91731326f8 207 Gene3D G3DSA:3.90.470.20 17 119 3.5E-13 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 TF3313_2555 39c8f38ac25029550963ff91731326f8 207 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 102 171 3.2E-8 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 TF3313_2555 39c8f38ac25029550963ff91731326f8 207 SUPERFAMILY SSF56214 102 166 2.09E-8 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 TF3313_2555 39c8f38ac25029550963ff91731326f8 207 SUPERFAMILY SSF56214 43 94 7.72E-8 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 TF3313_1925 506e9a7f740d17ea6530df400cdbcc33 407 Pfam PF16149 Domain of unknown function (DUF4857) 39 308 3.6E-105 T 11-10-2018 IPR032333 Protein of unknown function DUF4857 TF3313_1989 20bb70e6bf824020f74f5af25b07b1a0 223 Pfam PF00849 RNA pseudouridylate synthase 9 166 3.8E-34 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TF3313_1989 20bb70e6bf824020f74f5af25b07b1a0 223 Gene3D G3DSA:3.30.2350.10 1 213 1.1E-58 T 11-10-2018 TF3313_1989 20bb70e6bf824020f74f5af25b07b1a0 223 SUPERFAMILY SSF55120 1 215 5.28E-53 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TF3313_1613 548746886e83d54dda54248c20d3c15d 337 SUPERFAMILY SSF52518 17 337 1.44E-76 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold TF3313_1613 548746886e83d54dda54248c20d3c15d 337 Gene3D G3DSA:3.40.50.970 26 205 1.9E-21 T 11-10-2018 TF3313_1613 548746886e83d54dda54248c20d3c15d 337 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 53 200 5.4E-27 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 TF3313_1675 bf8a913561c5abc487eda040562ebe42 377 SUPERFAMILY SSF53756 1 373 6.28E-32 T 11-10-2018 TF3313_1675 bf8a913561c5abc487eda040562ebe42 377 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 5 370 1.6E-61 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 TF3313_1675 bf8a913561c5abc487eda040562ebe42 377 Pfam PF02684 Lipid-A-disaccharide synthetase 4 359 2.9E-70 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 TF3313_0967 e83ee59cdd436e97c1bbe37cb02680f9 209 Gene3D G3DSA:3.40.50.10490 1 200 1.3E-59 T 11-10-2018 TF3313_0967 e83ee59cdd436e97c1bbe37cb02680f9 209 SUPERFAMILY SSF53697 1 195 9.38E-43 T 11-10-2018 TF3313_0967 e83ee59cdd436e97c1bbe37cb02680f9 209 Pfam PF01380 SIS domain 42 169 4.2E-20 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 TF3313_0712 5a78d2147d6511242e218251a9f78e12 201 Pfam PF12698 ABC-2 family transporter protein 1 192 1.1E-13 T 11-10-2018 TF3313_1272 92d670db0b109c580df0b51600666713 271 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 4 252 1.2E-74 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 TF3313_1272 92d670db0b109c580df0b51600666713 271 Pfam PF00398 Ribosomal RNA adenine dimethylase 7 226 3.6E-47 T 11-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm TF3313_1272 92d670db0b109c580df0b51600666713 271 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 4 255 47.282 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 TF3313_1272 92d670db0b109c580df0b51600666713 271 SMART SM00650 20 189 4.1E-57 T 11-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 TF3313_1272 92d670db0b109c580df0b51600666713 271 Gene3D G3DSA:1.10.8.100 191 254 3.2E-14 T 11-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 TF3313_1272 92d670db0b109c580df0b51600666713 271 SUPERFAMILY SSF53335 4 255 2.92E-67 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_1272 92d670db0b109c580df0b51600666713 271 Gene3D G3DSA:3.40.50.150 1 190 1.0E-57 T 11-10-2018 TF3313_1272 92d670db0b109c580df0b51600666713 271 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 36 63 - T 11-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 TF3313_1361 4ffdfadbebbf4b1ea092916de400b32c 158 Gene3D G3DSA:3.10.129.10 2 157 5.2E-41 T 11-10-2018 TF3313_1361 4ffdfadbebbf4b1ea092916de400b32c 158 SUPERFAMILY SSF54637 5 150 3.53E-28 T 11-10-2018 IPR029069 HotDog domain superfamily TF3313_1361 4ffdfadbebbf4b1ea092916de400b32c 158 Pfam PF03061 Thioesterase superfamily 59 134 2.6E-7 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 TF3313_2883 afe5b4ce40f335086f3d47970a43c8cf 669 Gene3D G3DSA:2.170.130.10 39 162 6.2E-12 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_2883 afe5b4ce40f335086f3d47970a43c8cf 669 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 136 5.5E-9 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_2883 afe5b4ce40f335086f3d47970a43c8cf 669 SUPERFAMILY SSF56935 36 668 3.92E-64 T 11-10-2018 TF3313_2883 afe5b4ce40f335086f3d47970a43c8cf 669 Gene3D G3DSA:2.40.170.20 171 668 2.0E-48 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_2883 afe5b4ce40f335086f3d47970a43c8cf 669 Pfam PF00593 TonB dependent receptor 251 668 6.8E-41 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_1179 820fb8ee3baf86fd8c7ebd0f654b0156 151 Gene3D G3DSA:3.10.129.10 5 143 5.3E-22 T 11-10-2018 TF3313_1179 820fb8ee3baf86fd8c7ebd0f654b0156 151 SUPERFAMILY SSF54637 7 142 8.61E-18 T 11-10-2018 IPR029069 HotDog domain superfamily TF3313_0682 b7a1a3baabfa8817874f69571e762fec 327 Gene3D G3DSA:2.120.10.30 28 317 9.8E-97 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TF3313_0682 b7a1a3baabfa8817874f69571e762fec 327 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 159 181 1.8E-38 T 11-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) TF3313_0682 b7a1a3baabfa8817874f69571e762fec 327 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 118 139 1.8E-38 T 11-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) TF3313_0682 b7a1a3baabfa8817874f69571e762fec 327 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 42 59 1.8E-38 T 11-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) TF3313_0682 b7a1a3baabfa8817874f69571e762fec 327 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 222 239 1.8E-38 T 11-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) TF3313_0682 b7a1a3baabfa8817874f69571e762fec 327 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 265 283 1.8E-38 T 11-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) TF3313_0682 b7a1a3baabfa8817874f69571e762fec 327 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 182 202 1.8E-38 T 11-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) TF3313_0682 b7a1a3baabfa8817874f69571e762fec 327 SUPERFAMILY SSF63829 28 314 2.83E-62 T 11-10-2018 TF3313_0682 b7a1a3baabfa8817874f69571e762fec 327 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 41 284 9.0E-72 T 11-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region TF3313_0002 a928805b613c8b664e401be97e8d5a8b 797 Pfam PF12704 MacB-like periplasmic core domain 15 224 1.2E-13 T 11-10-2018 IPR025857 MacB-like periplasmic core domain TF3313_0416 46e48659eded4824ccda8635dbf36211 230 Pfam PF08378 Nuclease-related domain 9 121 6.6E-22 T 11-10-2018 IPR011528 Nuclease-related domain, NERD TF3313_0416 46e48659eded4824ccda8635dbf36211 230 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 197 229 8.6E-16 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 TF3313_0416 46e48659eded4824ccda8635dbf36211 230 Gene3D G3DSA:3.30.65.10 181 230 7.0E-7 T 11-10-2018 TF3313_0416 46e48659eded4824ccda8635dbf36211 230 SUPERFAMILY SSF57783 194 228 2.55E-11 T 11-10-2018 TF3313_0143 f64f19a3d4e711f2dc337950f478ba35 184 Gene3D G3DSA:1.10.260.40 5 81 8.8E-10 T 11-10-2018 TF3313_0143 f64f19a3d4e711f2dc337950f478ba35 184 SUPERFAMILY SSF51182 74 183 3.48E-26 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily TF3313_0143 f64f19a3d4e711f2dc337950f478ba35 184 Pfam PF07883 Cupin domain 112 182 1.2E-13 T 11-10-2018 IPR013096 Cupin 2, conserved barrel TF3313_0143 f64f19a3d4e711f2dc337950f478ba35 184 SUPERFAMILY SSF47413 4 73 9.01E-12 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TF3313_0143 f64f19a3d4e711f2dc337950f478ba35 184 Gene3D G3DSA:2.60.120.10 82 183 1.5E-26 T 11-10-2018 IPR014710 RmlC-like jelly roll fold TF3313_0143 f64f19a3d4e711f2dc337950f478ba35 184 Pfam PF13560 Helix-turn-helix domain 7 62 2.1E-8 T 11-10-2018 TF3313_0143 f64f19a3d4e711f2dc337950f478ba35 184 SMART SM00530 11 66 5.9E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TF3313_0107 d638aafcf42e08007cd195f3293a43df 424 Pfam PF07690 Major Facilitator Superfamily 19 381 6.9E-35 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TF3313_0107 d638aafcf42e08007cd195f3293a43df 424 Gene3D G3DSA:1.20.1250.20 2 419 2.0E-47 T 11-10-2018 TF3313_0107 d638aafcf42e08007cd195f3293a43df 424 SUPERFAMILY SSF103473 5 417 2.62E-49 T 11-10-2018 IPR036259 MFS transporter superfamily TF3313_0792 f47b828a26c205a20c3ed2950e7c2de0 153 Pfam PF13366 PD-(D/E)XK nuclease superfamily 14 125 1.5E-36 T 11-10-2018 IPR026350 GxxExxY protein TF3313_0792 f47b828a26c205a20c3ed2950e7c2de0 153 TIGRFAM TIGR04256 GxxExxY: GxxExxY protein 15 122 2.5E-37 T 11-10-2018 IPR026350 GxxExxY protein TF3313_2201 fb948fca5b9bbb24d4b2ae5954254f0a 107 SUPERFAMILY SSF54909 1 106 1.45E-34 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel TF3313_2201 fb948fca5b9bbb24d4b2ae5954254f0a 107 Pfam PF05336 L-rhamnose mutarotase 3 105 5.1E-39 T 11-10-2018 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 TF3313_2201 fb948fca5b9bbb24d4b2ae5954254f0a 107 Gene3D G3DSA:3.30.70.100 1 95 1.4E-29 T 11-10-2018 TF3313_1247 bf6ef7504c199a8f733bfac0ff724d45 291 SUPERFAMILY SSF53167 14 273 7.33E-48 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 TF3313_1247 bf6ef7504c199a8f733bfac0ff724d45 291 Pfam PF01048 Phosphorylase superfamily 31 274 5.8E-38 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 TF3313_1247 bf6ef7504c199a8f733bfac0ff724d45 291 Gene3D G3DSA:3.40.50.1580 25 291 1.3E-72 T 11-10-2018 TF3313_2528 9025ea420af2eb95c607771665522e39 289 Gene3D G3DSA:3.40.50.410 73 258 6.4E-12 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TF3313_2528 9025ea420af2eb95c607771665522e39 289 SUPERFAMILY SSF53300 73 216 3.27E-16 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TF3313_2528 9025ea420af2eb95c607771665522e39 289 Pfam PF01882 Protein of unknown function DUF58 38 122 3.1E-23 T 11-10-2018 IPR002881 Domain of unknown function DUF58 TF3313_2160 c268e1fe3f8920cf138256766cd2e318 215 Pfam PF11363 Protein of unknown function (DUF3164) 39 213 6.9E-11 T 11-10-2018 IPR021505 Bacteriophage B3, Orf6 TF3313_1848 d4ed5ccc88ee40a0a839b77d4b509107 216 Pfam PF16961 Putative OmpA-OmpF-like porin family 89 216 1.0E-6 T 11-10-2018 IPR031585 Putative OmpA-OmpF-like porin family TF3313_1848 d4ed5ccc88ee40a0a839b77d4b509107 216 SUPERFAMILY SSF56925 54 171 1.45E-7 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel TF3313_0153 af7b9b4f32541f8f92c0a46985c5c465 512 Gene3D G3DSA:1.25.40.390 26 498 8.2E-84 T 11-10-2018 TF3313_0153 af7b9b4f32541f8f92c0a46985c5c465 512 SUPERFAMILY SSF48452 22 510 1.77E-86 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0153 af7b9b4f32541f8f92c0a46985c5c465 512 Pfam PF12771 Starch-binding associating with outer membrane 3 512 3.3E-93 T 11-10-2018 TF3313_2075 2f2a57419f88d636cd4d31d81c1e3886 708 Pfam PF14508 Glycosyl-hydrolase 97 N-terminal 29 294 1.2E-84 T 11-10-2018 IPR029486 Glycosyl-hydrolase 97, N-terminal domain TF3313_2075 2f2a57419f88d636cd4d31d81c1e3886 708 SUPERFAMILY SSF51445 349 591 6.84E-17 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily TF3313_2075 2f2a57419f88d636cd4d31d81c1e3886 708 Pfam PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation 604 704 9.0E-30 T 11-10-2018 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain TF3313_2075 2f2a57419f88d636cd4d31d81c1e3886 708 Pfam PF10566 Glycoside hydrolase 97 299 601 1.1E-114 T 11-10-2018 IPR019563 Glycosyl-hydrolase 97, catalytic domain TF3313_2075 2f2a57419f88d636cd4d31d81c1e3886 708 Gene3D G3DSA:3.20.20.70 288 606 8.9E-141 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_2075 2f2a57419f88d636cd4d31d81c1e3886 708 Gene3D G3DSA:2.60.40.1180 607 708 1.2E-36 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta TF3313_2075 2f2a57419f88d636cd4d31d81c1e3886 708 Gene3D G3DSA:2.70.98.10 26 287 1.3E-105 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 TF3313_1967 436c505dca62bc0b596bdd6c3d4b7eac 561 Gene3D G3DSA:2.70.70.10 32 171 1.7E-29 T 11-10-2018 IPR011055 Duplicated hybrid motif TF3313_1967 436c505dca62bc0b596bdd6c3d4b7eac 561 SUPERFAMILY SSF51261 13 171 2.62E-27 T 11-10-2018 IPR011055 Duplicated hybrid motif TF3313_1967 436c505dca62bc0b596bdd6c3d4b7eac 561 Pfam PF01551 Peptidase family M23 46 112 2.1E-7 T 11-10-2018 IPR016047 Peptidase M23 TF3313_1967 436c505dca62bc0b596bdd6c3d4b7eac 561 Pfam PF01551 Peptidase family M23 133 168 1.5E-7 T 11-10-2018 IPR016047 Peptidase M23 TF3313_0568 9e11002df95d40548b1c257f5668aa38 134 Gene3D G3DSA:1.10.260.40 79 119 4.1E-5 T 11-10-2018 TF3313_2709 b9fde28fb94a89917d0f708cf8c82777 281 Pfam PF14257 Domain of unknown function (DUF4349) 19 266 1.0E-62 T 11-10-2018 IPR025645 Domain of unknown function DUF4349 TF3313_2420 4f7d9e11aed96932606318c3221f3906 234 SUPERFAMILY SSF144091 11 227 3.66E-41 T 11-10-2018 TF3313_2420 4f7d9e11aed96932606318c3221f3906 234 Pfam PF01694 Rhomboid family 52 225 7.1E-28 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 TF3313_2420 4f7d9e11aed96932606318c3221f3906 234 Gene3D G3DSA:1.20.1540.10 8 231 8.6E-25 T 11-10-2018 IPR035952 Rhomboid-like superfamily TF3313_2564 7271bc2a7d32ba93f0104283cb001eee 318 Gene3D G3DSA:3.40.50.720 1 315 3.1E-94 T 11-10-2018 TF3313_2564 7271bc2a7d32ba93f0104283cb001eee 318 SUPERFAMILY SSF51735 1 313 6.62E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_2564 7271bc2a7d32ba93f0104283cb001eee 318 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 242 2.0E-21 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 TF3313_0940 d21d7865181ab94515a243e546c0d2bc 1087 Pfam PF11028 Protein of unknown function (DUF2723) 35 212 1.1E-74 T 11-10-2018 IPR021280 Protein of unknown function DUF2723 TF3313_0828 8629a9c65f7babf5c8a3a152ad8ad643 923 Gene3D G3DSA:3.40.50.1820 589 896 1.2E-50 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TF3313_0828 8629a9c65f7babf5c8a3a152ad8ad643 923 SUPERFAMILY SSF82171 34 522 1.18E-10 T 11-10-2018 TF3313_0828 8629a9c65f7babf5c8a3a152ad8ad643 923 SUPERFAMILY SSF53474 638 894 1.68E-47 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TF3313_0828 8629a9c65f7babf5c8a3a152ad8ad643 923 Pfam PF00326 Prolyl oligopeptidase family 695 894 6.6E-25 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 TF3313_1210 8f7537416f8aed1a9887a83d3cf36bd8 339 Pfam PF01515 Phosphate acetyl/butaryl transferase 3 326 2.9E-123 T 11-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 TF3313_1210 8f7537416f8aed1a9887a83d3cf36bd8 339 SUPERFAMILY SSF53659 1 331 5.35E-94 T 11-10-2018 TF3313_1210 8f7537416f8aed1a9887a83d3cf36bd8 339 PIRSF PIRSF000428 1 334 4.4E-104 T 11-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 TF3313_1210 8f7537416f8aed1a9887a83d3cf36bd8 339 Gene3D G3DSA:3.40.50.10950 9 330 4.3E-135 T 11-10-2018 TF3313_1210 8f7537416f8aed1a9887a83d3cf36bd8 339 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 18 325 2.1E-114 T 11-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 TF3313_1210 8f7537416f8aed1a9887a83d3cf36bd8 339 Gene3D G3DSA:3.40.50.10750 143 303 4.3E-135 T 11-10-2018 TF3313_2805 0af3d4718d43c1c28fb60fda7a569c34 441 SUPERFAMILY SSF52540 1 224 3.19E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2805 0af3d4718d43c1c28fb60fda7a569c34 441 Pfam PF13635 Domain of unknown function (DUF4143) 250 378 2.9E-10 T 11-10-2018 IPR025420 Domain of unknown function DUF4143 TF3313_2805 0af3d4718d43c1c28fb60fda7a569c34 441 Pfam PF13173 AAA domain 19 174 2.5E-36 T 11-10-2018 TF3313_0208 f888c1da3076f2e6fe79b589be4d9d91 325 Gene3D G3DSA:3.20.20.70 5 293 1.3E-60 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_0208 f888c1da3076f2e6fe79b589be4d9d91 325 SUPERFAMILY SSF51395 1 302 9.02E-57 T 11-10-2018 TF3313_0208 f888c1da3076f2e6fe79b589be4d9d91 325 Pfam PF01180 Dihydroorotate dehydrogenase 5 287 5.7E-15 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 TF3313_0208 f888c1da3076f2e6fe79b589be4d9d91 325 PIRSF PIRSF000164 1 304 1.5E-38 T 11-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 TF3313_1177 e790f0538b362f9ef25476d735ac8685 302 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 103 295 3.4E-19 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 TF3313_2857 153d86b43d536fb62bee3e13aa5f1cca 820 SUPERFAMILY SSF52540 389 712 1.14E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2857 153d86b43d536fb62bee3e13aa5f1cca 820 Gene3D G3DSA:3.40.50.300 386 538 7.2E-10 T 11-10-2018 TF3313_2857 153d86b43d536fb62bee3e13aa5f1cca 820 Gene3D G3DSA:3.40.50.300 579 754 6.3E-14 T 11-10-2018 TF3313_2956 7c1462f934d1fe41af4e61f7e83d629a 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 145 1.7E-25 T 11-10-2018 IPR020069 Ribosomal protein L9, C-terminal TF3313_2956 7c1462f934d1fe41af4e61f7e83d629a 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 4.8E-22 T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2956 7c1462f934d1fe41af4e61f7e83d629a 148 SUPERFAMILY SSF55653 60 146 2.35E-23 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily TF3313_2956 7c1462f934d1fe41af4e61f7e83d629a 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 147 23.561 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_2956 7c1462f934d1fe41af4e61f7e83d629a 148 Gene3D G3DSA:3.40.5.10 1 59 1.4E-22 T 11-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_2956 7c1462f934d1fe41af4e61f7e83d629a 148 SUPERFAMILY SSF55658 1 56 3.31E-17 T 11-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal TF3313_2956 7c1462f934d1fe41af4e61f7e83d629a 148 Gene3D G3DSA:3.10.430.100 60 147 2.8E-25 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily TF3313_2956 7c1462f934d1fe41af4e61f7e83d629a 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 145 7.0E-39 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 TF3313_0144 79c530261f4c0117c2a481e87548c47f 191 Gene3D G3DSA:2.30.30.730 1 49 3.6E-26 T 11-10-2018 TF3313_0144 79c530261f4c0117c2a481e87548c47f 191 Gene3D G3DSA:1.10.10.1650 50 142 8.2E-30 T 11-10-2018 TF3313_2375 fdbb02d50c74bed9e50049b81d8402da 153 Pfam PF14126 Domain of unknown function (DUF4293) 2 152 6.2E-46 T 11-10-2018 IPR025635 Protein of unknown function DUF4293 TF3313_0468 200145d4ba1316bb46c87dcafa2e8b40 202 SUPERFAMILY SSF52540 15 194 2.97E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_0468 200145d4ba1316bb46c87dcafa2e8b40 202 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 12 196 25.153 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 TF3313_0468 200145d4ba1316bb46c87dcafa2e8b40 202 Pfam PF01926 50S ribosome-binding GTPase 27 144 1.1E-19 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TF3313_0468 200145d4ba1316bb46c87dcafa2e8b40 202 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 192 1.9E-65 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 TF3313_0468 200145d4ba1316bb46c87dcafa2e8b40 202 Gene3D G3DSA:3.40.50.300 1 201 1.6E-52 T 11-10-2018 TF3313_1573 8d47024a702d3f476745f0f86da318aa 479 Pfam PF07980 SusD family 331 479 8.1E-17 T 11-10-2018 IPR012944 RagB/SusD domain TF3313_1573 8d47024a702d3f476745f0f86da318aa 479 Gene3D G3DSA:1.25.40.390 25 475 1.8E-94 T 11-10-2018 TF3313_1573 8d47024a702d3f476745f0f86da318aa 479 SUPERFAMILY SSF48452 12 479 4.43E-84 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1573 8d47024a702d3f476745f0f86da318aa 479 Pfam PF14322 Starch-binding associating with outer membrane 14 229 1.3E-21 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_1728 7500f855ae1e4b5be73d2f3952f69956 180 Pfam PF00877 NlpC/P60 family 70 175 3.6E-24 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain TF3313_1728 7500f855ae1e4b5be73d2f3952f69956 180 Gene3D G3DSA:3.90.1720.10 58 180 1.5E-32 T 11-10-2018 TF3313_1728 7500f855ae1e4b5be73d2f3952f69956 180 SUPERFAMILY SSF54001 62 175 1.5E-30 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TF3313_0088 2a39f8c3e184ad112972946186cd804d 229 Gene3D G3DSA:3.90.550.10 11 228 4.6E-19 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_0088 2a39f8c3e184ad112972946186cd804d 229 SUPERFAMILY SSF53448 9 222 1.81E-18 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TF3313_2369 63a195844e7e87a2f2aedaa035cfaf87 429 SUPERFAMILY SSF56935 49 417 1.2E-5 T 11-10-2018 TF3313_2369 63a195844e7e87a2f2aedaa035cfaf87 429 Pfam PF13372 Alginate export 71 416 2.0E-10 T 11-10-2018 IPR025388 Alginate export domain TF3313_2783 68b6d439eef34d6deed1698136ab11b9 336 Gene3D G3DSA:3.40.630.10 21 334 2.1E-67 T 11-10-2018 TF3313_2783 68b6d439eef34d6deed1698136ab11b9 336 SUPERFAMILY SSF53187 22 333 1.09E-63 T 11-10-2018 TF3313_2783 68b6d439eef34d6deed1698136ab11b9 336 Pfam PF04389 Peptidase family M28 123 322 1.1E-49 T 11-10-2018 IPR007484 Peptidase M28 TF3313_1035 8532bfb5470eb0ff7a9a0cc99ad66284 89 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 8 89 1.6E-8 T 11-10-2018 IPR026444 Secretion system C-terminal sorting domain TF3313_0953 e83e3f3a77459785621317bcc0b20ee9 104 Pfam PF14055 NVEALA protein 3 60 5.2E-9 T 11-10-2018 IPR025905 NVEALA protein TF3313_2162 935101bfb1c2ab5ddcb8f98b9acab868 140 Gene3D G3DSA:1.10.260.40 1 73 4.7E-5 T 11-10-2018 TF3313_0152 c5b8cab65eb3dc24f127052f5010912a 291 SUPERFAMILY SSF49899 38 283 1.13E-75 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily TF3313_0152 c5b8cab65eb3dc24f127052f5010912a 291 Gene3D G3DSA:2.60.120.200 40 282 9.3E-90 T 11-10-2018 TF3313_0152 c5b8cab65eb3dc24f127052f5010912a 291 Pfam PF00722 Glycosyl hydrolases family 16 77 277 2.3E-32 T 11-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 TF3313_1918 6325b2a579a32e639db2ff410d52672e 363 Pfam PF07075 Protein of unknown function (DUF1343) 13 356 4.5E-119 T 11-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 TF3313_1918 6325b2a579a32e639db2ff410d52672e 363 PIRSF PIRSF016719 1 260 9.1E-91 T 11-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 TF3313_1918 6325b2a579a32e639db2ff410d52672e 363 PIRSF PIRSF016719 269 357 4.3E-9 T 11-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 TF3313_1918 6325b2a579a32e639db2ff410d52672e 363 Gene3D G3DSA:3.40.50.12170 1 359 4.8E-132 T 11-10-2018 TF3313_0488 2988b91817d78cdba74c453426dad50f 197 Pfam PF13358 DDE superfamily endonuclease 18 168 8.6E-31 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain TF3313_1914 e116985916fb0d3f7e97865e4bfa8348 350 SUPERFAMILY SSF47240 22 347 5.51E-96 T 11-10-2018 IPR009078 Ferritin-like superfamily TF3313_1914 e116985916fb0d3f7e97865e4bfa8348 350 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 122 138 - T 11-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TF3313_1914 e116985916fb0d3f7e97865e4bfa8348 350 Pfam PF00268 Ribonucleotide reductase, small chain 35 309 1.8E-84 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TF3313_1914 e116985916fb0d3f7e97865e4bfa8348 350 PIRSF PIRSF000355 4 350 5.8E-127 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TF3313_1914 e116985916fb0d3f7e97865e4bfa8348 350 Gene3D G3DSA:1.10.620.20 11 323 1.2E-96 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 TF3313_2391 4401777f6d7d9772e6594a05dc8e8305 194 Gene3D G3DSA:3.40.470.10 6 193 9.0E-21 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TF3313_2391 4401777f6d7d9772e6594a05dc8e8305 194 SUPERFAMILY SSF52141 9 188 2.79E-21 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TF3313_0706 34b3a892c0371322edf30a84db73d0a4 374 SUPERFAMILY SSF69593 83 315 1.96E-6 T 11-10-2018 TF3313_2440 4548d9744076062134cabfcda06e5e09 493 Pfam PF02321 Outer membrane efflux protein 307 487 4.7E-30 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TF3313_2440 4548d9744076062134cabfcda06e5e09 493 Pfam PF02321 Outer membrane efflux protein 40 275 5.9E-29 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TF3313_2440 4548d9744076062134cabfcda06e5e09 493 SUPERFAMILY SSF56954 1 488 1.09E-81 T 11-10-2018 TF3313_2322 46f239a5b13ab870ad5b6e6c6a2625e1 211 SUPERFAMILY SSF54211 3 131 6.45E-38 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TF3313_2322 46f239a5b13ab870ad5b6e6c6a2625e1 211 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 79 108 - T 11-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site TF3313_2322 46f239a5b13ab870ad5b6e6c6a2625e1 211 Gene3D G3DSA:3.30.230.30 1 133 3.6E-45 T 11-10-2018 IPR036956 Impact, N-terminal domain superfamily TF3313_2322 46f239a5b13ab870ad5b6e6c6a2625e1 211 Pfam PF01205 Uncharacterized protein family UPF0029 19 124 6.9E-28 T 11-10-2018 IPR001498 Impact, N-terminal TF3313_0999 041a3714a032d8944fe5e838e9d7e546 201 SUPERFAMILY SSF51161 27 200 1.94E-36 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily TF3313_0999 041a3714a032d8944fe5e838e9d7e546 201 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 148 183 1.2E-5 T 11-10-2018 IPR001451 Hexapeptide repeat TF3313_0999 041a3714a032d8944fe5e838e9d7e546 201 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 113 146 9.9E-5 T 11-10-2018 IPR001451 Hexapeptide repeat TF3313_0999 041a3714a032d8944fe5e838e9d7e546 201 Gene3D G3DSA:2.160.10.10 51 199 1.9E-27 T 11-10-2018 TF3313_2935 2e88cae340bd83061799afd784b8131d 179 Pfam PF16702 Domain of unknown function (DUF5063) 9 168 1.3E-58 T 11-10-2018 IPR032025 Protein of unknown function DUF5063 TF3313_2935 2e88cae340bd83061799afd784b8131d 179 Gene3D G3DSA:1.20.120.1550 1 177 1.9E-65 T 11-10-2018 TF3313_0804 30bd3f015d10fcd4f3e075a15185abe8 764 Gene3D G3DSA:1.20.1530.20 69 470 7.8E-96 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily TF3313_0804 30bd3f015d10fcd4f3e075a15185abe8 764 Pfam PF00999 Sodium/hydrogen exchanger family 75 462 3.1E-56 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 TF3313_1726 34caea1c7c830224149eddab8b668570 105 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 103 4.6E-33 T 11-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1726 34caea1c7c830224149eddab8b668570 105 SUPERFAMILY SSF141091 1 104 4.19E-30 T 11-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1726 34caea1c7c830224149eddab8b668570 105 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 105 23.209 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_1726 34caea1c7c830224149eddab8b668570 105 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 103 3.1E-29 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TF3313_0094 ba57c210c3fa4a47824bc33880bf990a 404 Gene3D G3DSA:2.130.10.10 80 341 7.6E-12 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TF3313_0094 ba57c210c3fa4a47824bc33880bf990a 404 SUPERFAMILY SSF75011 82 249 1.03E-11 T 11-10-2018 TF3313_2729 e6aab4474e9166e069a5250fad14c288 184 Gene3D G3DSA:2.10.109.10 57 178 5.0E-14 T 11-10-2018 TF3313_2729 e6aab4474e9166e069a5250fad14c288 184 Pfam PF00717 Peptidase S24-like 1 97 1.0E-6 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C TF3313_2729 e6aab4474e9166e069a5250fad14c288 184 SUPERFAMILY SSF51306 1 176 3.24E-28 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily TF3313_2729 e6aab4474e9166e069a5250fad14c288 184 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 1 172 7.7E-21 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TF3313_1234 8e283719dab713560496d68b12cfc95f 89 Pfam PF03400 IS1 transposase 9 74 5.3E-9 T 11-10-2018 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 TF3313_2703 195bb908d924be0bce01a522310ea45b 100 Pfam PF04977 Septum formation initiator 22 99 3.2E-12 T 11-10-2018 IPR007060 Septum formation initiator FtsL/DivIC TF3313_2483 56dc10d78afaf39bdb7ac19224000fd8 131 Pfam PF10825 Protein of unknown function (DUF2752) 40 87 1.6E-21 T 11-10-2018 IPR021215 Protein of unknown function DUF2752 TF3313_1276 0b681a08139b5afe54040babaec4966b 375 Pfam PF16401 Domain of unknown function (DUF5009) 11 152 1.5E-8 T 11-10-2018 IPR032176 Domain of unknown function DUF5009 TF3313_2747 bcff63454c26c4adc97555ec0132be66 854 Pfam PF13715 CarboxypepD_reg-like domain 29 113 2.6E-15 T 11-10-2018 TF3313_2747 bcff63454c26c4adc97555ec0132be66 854 SUPERFAMILY SSF49464 27 111 3.27E-13 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_2747 bcff63454c26c4adc97555ec0132be66 854 Gene3D G3DSA:2.60.40.1120 29 104 2.2E-6 T 11-10-2018 TF3313_2757 13d185ba0765806b838bd204a0212184 393 Gene3D G3DSA:1.20.1600.10 14 391 9.8E-38 T 11-10-2018 TF3313_2757 13d185ba0765806b838bd204a0212184 393 Pfam PF02321 Outer membrane efflux protein 220 390 1.3E-17 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TF3313_2757 13d185ba0765806b838bd204a0212184 393 Pfam PF02321 Outer membrane efflux protein 23 197 4.1E-11 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TF3313_2757 13d185ba0765806b838bd204a0212184 393 SUPERFAMILY SSF56954 2 390 2.22E-43 T 11-10-2018 TF3313_1900 e2232ab72d34a141bbec67f616c210ef 268 Pfam PF09407 AbiEi antitoxin C-terminal domain 70 213 1.1E-27 T 11-10-2018 IPR018547 AbiEi antitoxin C-terminal domain TF3313_1317 e08a29cfdcb089f7a8d08ddb202cba76 171 Pfam PF02631 RecX family 42 158 1.1E-21 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 TF3313_1317 e08a29cfdcb089f7a8d08ddb202cba76 171 Gene3D G3DSA:1.10.10.10 62 105 3.4E-10 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_2227 6434d98b3465c5ce9974e6318da2ec95 159 Gene3D G3DSA:2.60.120.10 19 132 3.3E-10 T 11-10-2018 IPR014710 RmlC-like jelly roll fold TF3313_2227 6434d98b3465c5ce9974e6318da2ec95 159 TIGRFAM TIGR04366 cupin_WbuC: cupin fold metalloprotein, WbuC family 3 136 3.9E-49 T 11-10-2018 IPR027565 Cupin fold metalloprotein, WbuC family TF3313_2227 6434d98b3465c5ce9974e6318da2ec95 159 SUPERFAMILY SSF51182 24 125 4.72E-15 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily TF3313_0990 341f955a540819b13df180d80297c146 261 SUPERFAMILY SSF56317 1 252 5.1E-55 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TF3313_0990 341f955a540819b13df180d80297c146 261 Gene3D G3DSA:3.60.110.10 1 257 4.3E-67 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TF3313_0990 341f955a540819b13df180d80297c146 261 Pfam PF00795 Carbon-nitrogen hydrolase 6 243 3.5E-32 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 TF3313_0559 263a651a526f5a016cae1a7ae46fa793 218 Gene3D G3DSA:3.90.320.10 2 217 4.4E-21 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal TF3313_2271 1c4b51e8b363fd68e55b96836dc3f0f0 544 Pfam PF14322 Starch-binding associating with outer membrane 70 208 5.8E-28 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_2271 1c4b51e8b363fd68e55b96836dc3f0f0 544 Gene3D G3DSA:1.25.40.390 20 537 1.2E-140 T 11-10-2018 TF3313_2271 1c4b51e8b363fd68e55b96836dc3f0f0 544 Pfam PF07980 SusD family 278 542 3.1E-55 T 11-10-2018 IPR012944 RagB/SusD domain TF3313_2271 1c4b51e8b363fd68e55b96836dc3f0f0 544 SUPERFAMILY SSF48452 18 542 5.55E-131 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0031 0d9ab22aa00d3dea689d9e9fb4235351 600 Gene3D G3DSA:1.25.40.390 49 253 2.1E-32 T 11-10-2018 TF3313_0031 0d9ab22aa00d3dea689d9e9fb4235351 600 Gene3D G3DSA:1.25.40.390 309 600 3.3E-24 T 11-10-2018 TF3313_0031 0d9ab22aa00d3dea689d9e9fb4235351 600 SUPERFAMILY SSF48452 20 597 7.59E-72 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0031 0d9ab22aa00d3dea689d9e9fb4235351 600 Pfam PF12771 Starch-binding associating with outer membrane 385 573 3.2E-6 T 11-10-2018 TF3313_0031 0d9ab22aa00d3dea689d9e9fb4235351 600 Pfam PF12771 Starch-binding associating with outer membrane 9 293 3.8E-13 T 11-10-2018 TF3313_0995 18fb0ecac07dc304a728a207fb04e77e 181 SUPERFAMILY SSF55729 3 162 1.83E-27 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TF3313_0995 18fb0ecac07dc304a728a207fb04e77e 181 Gene3D G3DSA:3.40.630.30 1 179 3.2E-32 T 11-10-2018 TF3313_0995 18fb0ecac07dc304a728a207fb04e77e 181 Pfam PF13302 Acetyltransferase (GNAT) domain 23 149 1.9E-19 T 11-10-2018 IPR000182 GNAT domain TF3313_2920 a705e02a534533eebe027a7956bd64e8 254 Gene3D G3DSA:1.10.1040.20 155 250 1.1E-33 T 11-10-2018 IPR037108 TM1727-like, C-terminal domain superfamily TF3313_2920 a705e02a534533eebe027a7956bd64e8 254 Pfam PF10728 Domain of unknown function (DUF2520) 124 247 1.0E-30 T 11-10-2018 IPR018931 Domain of unknown function DUF2520 TF3313_2920 a705e02a534533eebe027a7956bd64e8 254 Gene3D G3DSA:3.40.50.720 1 152 9.6E-44 T 11-10-2018 TF3313_2920 a705e02a534533eebe027a7956bd64e8 254 SUPERFAMILY SSF48179 158 249 3.74E-24 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TF3313_2920 a705e02a534533eebe027a7956bd64e8 254 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 79 2.0E-6 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal TF3313_2920 a705e02a534533eebe027a7956bd64e8 254 SUPERFAMILY SSF51735 2 156 2.87E-26 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TF3313_0175 ba4aae44388da2c428e7cb7504d2011b 430 TIGRFAM TIGR02221 cas_TM1812: CRISPR-associated protein, TM1812 family 5 216 1.0E-24 T 11-10-2018 IPR011742 CRISPR-associated protein, TM1812 TF3313_0175 ba4aae44388da2c428e7cb7504d2011b 430 TIGRFAM TIGR02549 CRISPR_DxTHG: CRISPR-associated DxTHG motif protein 124 139 3.7E-4 T 11-10-2018 IPR013383 CRISPR-associated protein DxTHG, conserved site TF3313_0175 ba4aae44388da2c428e7cb7504d2011b 430 Pfam PF09455 CRISPR-associated (Cas) DxTHG family 5 403 1.0E-59 T 11-10-2018 IPR019016 CRISPR-associated DxTHG protein TF3313_1130 3152edd7037627a23799cf8a5ce4f4b4 1033 SUPERFAMILY SSF49464 29 111 1.16E-18 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_1130 3152edd7037627a23799cf8a5ce4f4b4 1033 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 29 1033 2.5E-247 T 11-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA TF3313_1130 3152edd7037627a23799cf8a5ce4f4b4 1033 Pfam PF13715 CarboxypepD_reg-like domain 31 113 1.0E-17 T 11-10-2018 TF3313_1130 3152edd7037627a23799cf8a5ce4f4b4 1033 Pfam PF07715 TonB-dependent Receptor Plug Domain 121 223 1.8E-20 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TF3313_1130 3152edd7037627a23799cf8a5ce4f4b4 1033 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 199 229 9.3E-17 T 11-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site TF3313_1130 3152edd7037627a23799cf8a5ce4f4b4 1033 SUPERFAMILY SSF56935 109 1033 1.33E-62 T 11-10-2018 TF3313_1130 3152edd7037627a23799cf8a5ce4f4b4 1033 Gene3D G3DSA:2.60.40.1120 31 101 6.2E-8 T 11-10-2018 TF3313_1130 3152edd7037627a23799cf8a5ce4f4b4 1033 Gene3D G3DSA:2.170.130.10 102 228 1.9E-28 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TF3313_0261 6c29d513c8d6dda9baa1970c3bdd173e 126 Pfam PF06803 Protein of unknown function (DUF1232) 65 99 2.4E-13 T 11-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 TF3313_2847 5c3040ed0c977e354dee816105bfc706 390 SUPERFAMILY SSF52540 192 380 4.71E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2847 5c3040ed0c977e354dee816105bfc706 390 Pfam PF14293 YWFCY protein 2 61 3.7E-27 T 11-10-2018 IPR025988 YWFCY domain TF3313_0100 3abc34ef4f09300dfb27af85f1d160a8 109 Gene3D G3DSA:1.10.1040.10 12 102 4.9E-15 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TF3313_0100 3abc34ef4f09300dfb27af85f1d160a8 109 SUPERFAMILY SSF48179 19 97 1.33E-7 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TF3313_0100 3abc34ef4f09300dfb27af85f1d160a8 109 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 47 96 2.2E-6 T 11-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain TF3313_1207 20046d898561f06456f2dc8a80e1f9b1 550 Pfam PF12741 Susd and RagB outer membrane lipoprotein 8 545 1.6E-130 T 11-10-2018 IPR024302 SusD-like TF3313_1207 20046d898561f06456f2dc8a80e1f9b1 550 SUPERFAMILY SSF48452 26 545 9.86E-123 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1207 20046d898561f06456f2dc8a80e1f9b1 550 Gene3D G3DSA:1.25.40.390 49 550 6.6E-141 T 11-10-2018 TF3313_1988 a8280e5cba1db2571371c39f2c2e1137 371 Gene3D G3DSA:3.40.30.10 221 371 2.7E-48 T 11-10-2018 TF3313_1988 a8280e5cba1db2571371c39f2c2e1137 371 Pfam PF14289 Domain of unknown function (DUF4369) 21 126 4.1E-11 T 11-10-2018 IPR025380 Domain of unknown function DUF4369 TF3313_1988 a8280e5cba1db2571371c39f2c2e1137 371 SUPERFAMILY SSF52833 227 369 7.89E-33 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TF3313_1988 a8280e5cba1db2571371c39f2c2e1137 371 Pfam PF13905 Thioredoxin-like 258 350 1.8E-23 T 11-10-2018 IPR012336 Thioredoxin-like fold TF3313_1988 a8280e5cba1db2571371c39f2c2e1137 371 ProSitePatterns PS00194 Thioredoxin family active site. 261 279 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 TF3313_0076 dd251ba65bb3d66a9a2f0ed5a0fe2216 309 Gene3D G3DSA:2.40.50.1020 201 301 3.4E-9 T 11-10-2018 TF3313_0076 dd251ba65bb3d66a9a2f0ed5a0fe2216 309 SMART SM00850 210 307 1.3E-17 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 TF3313_0076 dd251ba65bb3d66a9a2f0ed5a0fe2216 309 SUPERFAMILY SSF158745 26 146 8.5E-12 T 11-10-2018 TF3313_0076 dd251ba65bb3d66a9a2f0ed5a0fe2216 309 Pfam PF04397 LytTr DNA-binding domain 211 305 1.0E-14 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 TF3313_0327 a3d49befc1e92f6263271f54b7e2a53e 507 SUPERFAMILY SSF56954 17 488 7.06E-59 T 11-10-2018 TF3313_0327 a3d49befc1e92f6263271f54b7e2a53e 507 Pfam PF02321 Outer membrane efflux protein 130 279 4.3E-11 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TF3313_0327 a3d49befc1e92f6263271f54b7e2a53e 507 Pfam PF02321 Outer membrane efflux protein 302 488 1.7E-22 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TF3313_0327 a3d49befc1e92f6263271f54b7e2a53e 507 Gene3D G3DSA:1.20.1600.10 39 488 4.6E-53 T 11-10-2018 TF3313_0408 aeb322a8e87efdc3f33dad000fbe694e 197 Pfam PF01965 DJ-1/PfpI family 4 172 4.7E-26 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 TF3313_0408 aeb322a8e87efdc3f33dad000fbe694e 197 SUPERFAMILY SSF52317 4 176 1.45E-30 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TF3313_0408 aeb322a8e87efdc3f33dad000fbe694e 197 Gene3D G3DSA:3.40.50.880 1 197 1.1E-41 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TF3313_2859 87a7bd652c4693160d8ae6d87942930a 486 Gene3D G3DSA:3.40.50.300 177 456 4.0E-22 T 11-10-2018 TF3313_2859 87a7bd652c4693160d8ae6d87942930a 486 SUPERFAMILY SSF52540 43 441 1.18E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2859 87a7bd652c4693160d8ae6d87942930a 486 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 51 415 2.4E-20 T 11-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 TF3313_0083 126a2aa1da281b77c452f5d9c16880b4 391 TIGRFAM TIGR04150 pseudo_rSAM_GG: pseudo-rSAM protein, GG-Bacteroidales system 10 389 9.5E-107 T 11-10-2018 IPR026418 Pseudo-rSAM protein, GG-Bacteroidales system TF3313_1188 ab3b92db8c036736c5f9aac0f0795eff 480 Gene3D G3DSA:3.90.1580.10 32 166 5.1E-11 T 11-10-2018 TF3313_1188 ab3b92db8c036736c5f9aac0f0795eff 480 Gene3D G3DSA:3.90.1580.10 240 478 5.4E-56 T 11-10-2018 TF3313_1188 ab3b92db8c036736c5f9aac0f0795eff 480 SUPERFAMILY SSF56436 43 466 6.36E-67 T 11-10-2018 IPR016187 C-type lectin fold TF3313_1188 ab3b92db8c036736c5f9aac0f0795eff 480 Pfam PF03781 Sulfatase-modifying factor enzyme 1 45 465 6.7E-52 T 11-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 TF3313_0705 b5766968ae4b14e9ec2b34aa42962f10 1104 Gene3D G3DSA:1.25.40.10 240 407 1.4E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0705 b5766968ae4b14e9ec2b34aa42962f10 1104 SUPERFAMILY SSF48452 154 321 1.09E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0705 b5766968ae4b14e9ec2b34aa42962f10 1104 Gene3D G3DSA:1.25.40.10 30 229 1.7E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0705 b5766968ae4b14e9ec2b34aa42962f10 1104 Gene3D G3DSA:1.25.40.10 518 727 2.4E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0705 b5766968ae4b14e9ec2b34aa42962f10 1104 Pfam PF13174 Tetratricopeptide repeat 540 572 0.11 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TF3313_0626 9be642751d756f99b908857f6f25ce5c 287 Pfam PF00950 ABC 3 transport family 6 260 1.6E-68 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 TF3313_0626 9be642751d756f99b908857f6f25ce5c 287 Gene3D G3DSA:1.10.3470.10 31 270 7.6E-7 T 11-10-2018 IPR037294 ABC transporter, BtuC-like TF3313_0626 9be642751d756f99b908857f6f25ce5c 287 SUPERFAMILY SSF81345 3 257 6.8E-35 T 11-10-2018 IPR037294 ABC transporter, BtuC-like TF3313_2873 cc24f984b5ce61fbe6f38120d10e895e 416 Gene3D G3DSA:3.40.50.300 1 85 5.6E-6 T 11-10-2018 TF3313_2873 cc24f984b5ce61fbe6f38120d10e895e 416 Pfam PF13635 Domain of unknown function (DUF4143) 197 356 4.6E-10 T 11-10-2018 IPR025420 Domain of unknown function DUF4143 TF3313_2873 cc24f984b5ce61fbe6f38120d10e895e 416 SUPERFAMILY SSF52540 3 202 1.03E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2873 cc24f984b5ce61fbe6f38120d10e895e 416 Pfam PF13173 AAA domain 18 150 1.9E-39 T 11-10-2018 TF3313_1482 394506f02c3b442ac55cbfe499798752 85 Gene3D G3DSA:3.30.70.1290 14 82 1.4E-5 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 TF3313_0258 c5dde7f01d2c45a8faf3877300e5ed06 83 Pfam PF03956 Lysine exporter LysO 2 74 1.7E-7 T 11-10-2018 IPR005642 Lysine exporter LysO TF3313_0510 4bd7e2f43ee998c571310707516a38c8 259 Pfam PF04991 LicD family 31 134 1.5E-36 T 11-10-2018 IPR007074 LicD family TF3313_1034 3be7ea9d4f5883c34b96f836fbd10550 440 Gene3D G3DSA:2.40.128.550 56 169 3.3E-16 T 11-10-2018 TF3313_1034 3be7ea9d4f5883c34b96f836fbd10550 440 Gene3D G3DSA:2.40.128.550 179 290 2.1E-16 T 11-10-2018 TF3313_2894 668f5979513277039361712ae066dd1e 1151 SUPERFAMILY SSF52129 392 787 5.23E-67 T 11-10-2018 IPR029030 Caspase-like domain superfamily TF3313_2894 668f5979513277039361712ae066dd1e 1151 Gene3D G3DSA:3.40.50.1460 555 785 1.0E-21 T 11-10-2018 TF3313_2894 668f5979513277039361712ae066dd1e 1151 Pfam PF01364 Peptidase family C25 402 784 7.9E-82 T 11-10-2018 IPR001769 Gingipain GO:0006508|GO:0008234 TF3313_0939 bb98c9215815975a18e89d16dd9fa255 161 Pfam PF04892 VanZ like family 17 144 2.2E-16 T 11-10-2018 IPR006976 VanZ-like TF3313_1196 9ee761d929a0d6fcecc70f3e6bbda765 424 Pfam PF11013 Protein of unknown function (DUF2851) 3 375 1.3E-143 T 11-10-2018 IPR021272 Protein of unknown function DUF2851 TF3313_0210 cb5e4f10c63d47cf98e64f5f2f31637e 157 Pfam PF14902 Domain of unknown function (DUF4494) 3 138 1.6E-58 T 11-10-2018 IPR027848 Protein of unknown function DUF4494 TF3313_0341 29efc02ff959f6a6322a221ad6f00ed8 435 Pfam PF01098 Cell cycle protein 16 385 4.9E-71 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TF3313_2043 c86a40372ca1e5a476eb040e04e2083d 371 Gene3D G3DSA:2.120.10.30 72 164 1.0E-7 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TF3313_2043 c86a40372ca1e5a476eb040e04e2083d 371 Pfam PF17170 6-bladed beta-propeller 14 312 1.5E-39 T 11-10-2018 TF3313_2149 95aa146ee8ec8cc7d86a37cc0f09b3f7 356 Pfam PF04586 Caudovirus prohead serine protease 44 146 1.8E-6 T 11-10-2018 IPR006433 Prohead protease TF3313_0489 1c264fabb6e8328527f252b925a370e8 152 SUPERFAMILY SSF46689 45 145 2.51E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TF3313_0489 1c264fabb6e8328527f252b925a370e8 152 Pfam PF13565 Homeodomain-like domain 63 143 4.8E-15 T 11-10-2018 TF3313_2128 007719d5583f42b5c2f3eb9e7432279f 207 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 2 191 1.7E-52 T 11-10-2018 IPR012912 Plasmid pRiA4b, Orf3 TF3313_2128 007719d5583f42b5c2f3eb9e7432279f 207 SUPERFAMILY SSF159941 1 193 6.67E-47 T 11-10-2018 IPR024047 MM3350-like superfamily TF3313_2128 007719d5583f42b5c2f3eb9e7432279f 207 Gene3D G3DSA:3.10.290.30 1 193 1.9E-54 T 11-10-2018 IPR024047 MM3350-like superfamily TF3313_2313 e28765422cfec0fa75aa92b403736a34 514 SUPERFAMILY SSF51445 71 344 2.84E-22 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily TF3313_2313 e28765422cfec0fa75aa92b403736a34 514 Gene3D G3DSA:3.20.20.70 53 236 5.3E-9 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_2313 e28765422cfec0fa75aa92b403736a34 514 Pfam PF02638 Glycosyl hydrolase-like 10 48 362 1.7E-71 T 11-10-2018 IPR003790 Glycosyl hydrolase-like 10 TF3313_2313 e28765422cfec0fa75aa92b403736a34 514 SUPERFAMILY SSF49265 415 510 8.89E-5 T 11-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 TF3313_2313 e28765422cfec0fa75aa92b403736a34 514 Gene3D G3DSA:2.60.40.10 418 514 9.3E-6 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_1879 d0def5d0f4438f01553a6bbbbc7500c2 435 Gene3D G3DSA:2.60.40.3250 30 170 1.3E-49 T 11-10-2018 IPR038171 Peptidase M64, N-terminal domain superfamily TF3313_1879 d0def5d0f4438f01553a6bbbbc7500c2 435 Pfam PF16217 Peptidase M64 N-terminus 34 147 2.2E-43 T 11-10-2018 IPR032625 Peptidase M64, N-terminal TF3313_1879 d0def5d0f4438f01553a6bbbbc7500c2 435 Pfam PF09471 IgA Peptidase M64 178 429 1.0E-84 T 11-10-2018 IPR019026 Peptidase M64, IgA TF3313_0106 082c7c74de6a03aee967b7bb48e8d791 87 Gene3D G3DSA:2.20.70.100 42 84 7.2E-7 T 11-10-2018 TF3313_2732 ec8dad8db1f043138ede0fd8bd31681b 463 SUPERFAMILY SSF56954 2 461 7.06E-78 T 11-10-2018 TF3313_2732 ec8dad8db1f043138ede0fd8bd31681b 463 Gene3D G3DSA:1.20.1600.10 18 463 3.4E-78 T 11-10-2018 TF3313_2732 ec8dad8db1f043138ede0fd8bd31681b 463 Pfam PF02321 Outer membrane efflux protein 278 459 1.9E-29 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TF3313_2732 ec8dad8db1f043138ede0fd8bd31681b 463 Pfam PF02321 Outer membrane efflux protein 25 246 2.6E-22 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TF3313_1221 9c6952450db0f6a95eae19f37350156d 446 Pfam PF13701 Transposase DDE domain group 1 10 422 9.3E-49 T 11-10-2018 IPR025668 Transposase DDE domain TF3313_1221 9c6952450db0f6a95eae19f37350156d 446 SUPERFAMILY SSF53098 204 398 2.88E-7 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TF3313_0259 e89dd362efe3e529accb7a46fbc4de3b 208 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 33 208 5.0E-60 T 11-10-2018 IPR005642 Lysine exporter LysO TF3313_0259 e89dd362efe3e529accb7a46fbc4de3b 208 Pfam PF03956 Lysine exporter LysO 8 206 6.4E-68 T 11-10-2018 IPR005642 Lysine exporter LysO TF3313_1062 8b7f8cebdbe167a42c676578ef69a7de 244 Pfam PF06271 RDD family 18 146 1.1E-21 T 11-10-2018 IPR010432 RDD TF3313_2378 583c1546b9c54127dc6d0dd69d48fcb8 156 TIGRFAM TIGR03511 GldH_lipo: gliding motility-associated lipoprotein GldH 3 154 5.3E-66 T 11-10-2018 IPR020018 Gliding motility-associated lipoprotein, GldH TF3313_2378 583c1546b9c54127dc6d0dd69d48fcb8 156 Pfam PF14109 GldH lipoprotein 27 152 1.5E-38 T 11-10-2018 IPR020018 Gliding motility-associated lipoprotein, GldH TF3313_0557 f3c177e000f124ead98df70834854cb8 318 Pfam PF03837 RecT family 53 215 9.8E-17 T 11-10-2018 IPR018330 RecT family GO:0003677|GO:0006259 TF3313_2826 f30b9c026a61aecc2b6739d5391d8705 366 PRINTS PR00127 Clp protease catalytic subunit P signature 35 55 3.4E-8 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TF3313_2826 f30b9c026a61aecc2b6739d5391d8705 366 PRINTS PR00127 Clp protease catalytic subunit P signature 141 160 3.4E-8 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TF3313_2826 f30b9c026a61aecc2b6739d5391d8705 366 PRINTS PR00127 Clp protease catalytic subunit P signature 66 83 3.4E-8 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TF3313_2826 f30b9c026a61aecc2b6739d5391d8705 366 Gene3D G3DSA:3.90.226.10 1 177 8.2E-38 T 11-10-2018 TF3313_2826 f30b9c026a61aecc2b6739d5391d8705 366 Pfam PF00574 Clp protease 30 165 7.4E-23 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA TF3313_2826 f30b9c026a61aecc2b6739d5391d8705 366 SUPERFAMILY SSF52096 3 163 2.15E-34 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TF3313_1151 96b3aff1dbccdadd0e40953488d99ccf 69 Pfam PF13396 Phospholipase_D-nuclease N-terminal 19 58 6.6E-6 T 11-10-2018 IPR027379 Cardiolipin synthase N-terminal TF3313_2521 2fd75d4676bbc78099083bd5935caf2e 235 Pfam PF01569 PAP2 superfamily 64 185 1.7E-20 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase TF3313_2521 2fd75d4676bbc78099083bd5935caf2e 235 SUPERFAMILY SSF48317 4 190 1.96E-26 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily TF3313_2521 2fd75d4676bbc78099083bd5935caf2e 235 SMART SM00014 60 182 7.3E-11 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase TF3313_2521 2fd75d4676bbc78099083bd5935caf2e 235 Gene3D G3DSA:1.20.144.10 102 210 3.5E-17 T 11-10-2018 TF3313_2521 2fd75d4676bbc78099083bd5935caf2e 235 Gene3D G3DSA:1.20.144.10 4 101 7.1E-6 T 11-10-2018 TF3313_2387 a7196c89e055df09aa69379a1c9ccb54 149 Pfam PF09920 Uncharacterized protein conserved in archaea (DUF2150) 41 124 1.6E-4 T 11-10-2018 IPR014518 Uncharacterised conserved protein UCP022079 TF3313_0923 7ea55064e193af9601a9b59e126a72c0 74 SUPERFAMILY SSF56935 5 73 1.47E-7 T 11-10-2018 TF3313_0923 7ea55064e193af9601a9b59e126a72c0 74 Pfam PF00593 TonB dependent receptor 6 73 2.4E-6 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TF3313_0923 7ea55064e193af9601a9b59e126a72c0 74 Gene3D G3DSA:2.40.170.20 1 73 3.3E-6 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_1337 e281d13e264272c3f4845d3688cad454 209 Pfam PF01596 O-methyltransferase 13 208 1.8E-45 T 11-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 TF3313_1337 e281d13e264272c3f4845d3688cad454 209 Gene3D G3DSA:3.40.50.150 1 209 8.3E-67 T 11-10-2018 TF3313_1337 e281d13e264272c3f4845d3688cad454 209 SUPERFAMILY SSF53335 3 209 9.28E-48 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_2777 040bb38bdf21742b1b76cf14a8f6c687 64 SUPERFAMILY SSF54427 5 52 9.75E-9 T 11-10-2018 IPR032710 NTF2-like domain superfamily TF3313_2777 040bb38bdf21742b1b76cf14a8f6c687 64 Gene3D G3DSA:3.10.450.50 2 61 2.3E-11 T 11-10-2018 TF3313_2424 a7d81e320cd7adc58b436e4ef8757133 230 Pfam PF16412 Domain of unknown function (DUF5020) 22 230 7.7E-103 T 11-10-2018 TF3313_2424 a7d81e320cd7adc58b436e4ef8757133 230 SUPERFAMILY SSF111364 40 212 3.53E-8 T 11-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 TF3313_1341 a12de31a522a18138a7bbd07ede7f508 233 SUPERFAMILY SSF55347 28 145 1.41E-5 T 11-10-2018 TF3313_1341 a12de31a522a18138a7bbd07ede7f508 233 Gene3D G3DSA:3.30.360.10 26 231 8.5E-19 T 11-10-2018 TF3313_1433 7590871c308b8329ed3249db7d6eef39 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 160 172 6.7E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 TF3313_1433 7590871c308b8329ed3249db7d6eef39 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 6.7E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 TF3313_1433 7590871c308b8329ed3249db7d6eef39 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 90 106 6.7E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 TF3313_1433 7590871c308b8329ed3249db7d6eef39 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 191 203 6.7E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 TF3313_1433 7590871c308b8329ed3249db7d6eef39 260 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 247 8.5E-99 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 TF3313_1433 7590871c308b8329ed3249db7d6eef39 260 Hamap MF_01974 Methionine aminopeptidase [map]. 2 249 40.054 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 TF3313_1433 7590871c308b8329ed3249db7d6eef39 260 Pfam PF00557 Metallopeptidase family M24 12 239 1.7E-50 T 11-10-2018 IPR000994 Peptidase M24 TF3313_1433 7590871c308b8329ed3249db7d6eef39 260 SUPERFAMILY SSF55920 1 248 1.31E-82 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like TF3313_1433 7590871c308b8329ed3249db7d6eef39 260 Gene3D G3DSA:3.90.230.10 1 252 4.0E-101 T 11-10-2018 TF3313_1374 a0d420d8b0cf8b903d1ae2094a70bc00 81 SUPERFAMILY SSF54928 2 80 1.18E-27 T 11-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 TF3313_1374 a0d420d8b0cf8b903d1ae2094a70bc00 81 Gene3D G3DSA:3.30.70.330 1 81 6.2E-27 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily TF3313_1374 a0d420d8b0cf8b903d1ae2094a70bc00 81 SMART SM00360 2 75 3.9E-25 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 TF3313_1374 a0d420d8b0cf8b903d1ae2094a70bc00 81 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 72 1.1E-20 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 TF3313_1656 d4f2731633c81f2bb5e0426d08977602 284 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 8 271 16.842 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 TF3313_1656 d4f2731633c81f2bb5e0426d08977602 284 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 9 271 8.7E-53 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 TF3313_1656 d4f2731633c81f2bb5e0426d08977602 284 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 11 265 3.5E-74 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 TF3313_0063 9351883ad5a6bd83366db0ed463d055d 407 TIGRFAM TIGR04150 pseudo_rSAM_GG: pseudo-rSAM protein, GG-Bacteroidales system 4 405 7.1E-102 T 11-10-2018 IPR026418 Pseudo-rSAM protein, GG-Bacteroidales system TF3313_0860 121cb139b6afd8d2831d5b6fb26e257e 162 Pfam PF14060 Domain of unknown function (DUF4252) 5 158 4.6E-39 T 11-10-2018 IPR025348 Protein of unknown function DUF4252 TF3313_1054 c1f8a61820f9188c7664853a61dc30b6 609 SUPERFAMILY SSF56935 104 609 2.2E-15 T 11-10-2018 TF3313_1054 c1f8a61820f9188c7664853a61dc30b6 609 Gene3D G3DSA:2.40.170.20 481 609 2.8E-6 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TF3313_1142 89cb1316babe2d6dfbe9743491c4ea79 196 Gene3D G3DSA:3.10.50.40 21 196 2.3E-23 T 11-10-2018 TF3313_1142 89cb1316babe2d6dfbe9743491c4ea79 196 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 81 191 2.9E-6 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain TF3313_1142 89cb1316babe2d6dfbe9743491c4ea79 196 SUPERFAMILY SSF54534 28 194 2.75E-15 T 11-10-2018 TF3313_0643 a0fcc268e88541e79abc5e0f815e31e8 215 Pfam PF16271 Domain of unknown function (DUF4924) 39 212 6.1E-74 T 11-10-2018 IPR032574 Protein of unknown function DUF4924 TF3313_1320 10aa4ecb71ac981a53920f38b1b351c8 452 SUPERFAMILY SSF110296 184 405 1.6E-10 T 11-10-2018 TF3313_1320 10aa4ecb71ac981a53920f38b1b351c8 452 Gene3D G3DSA:2.130.10.10 143 422 2.1E-8 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TF3313_0380 8d9c146a1e896ea8f6b206d20dfad80b 443 Pfam PF01554 MatE 18 177 1.0E-26 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TF3313_0380 8d9c146a1e896ea8f6b206d20dfad80b 443 Pfam PF01554 MatE 243 394 1.4E-12 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TF3313_0380 8d9c146a1e896ea8f6b206d20dfad80b 443 TIGRFAM TIGR00797 matE: MATE efflux family protein 18 412 3.6E-75 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TF3313_0887 dd5d078cdd4bd335a07b155601c8474f 206 Pfam PF01810 LysE type translocator 15 198 2.4E-18 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 TF3313_1295 08ed7d5dc53a7033116db5148829bd22 216 SUPERFAMILY SSF47781 146 214 1.22E-9 T 11-10-2018 IPR010994 RuvA domain 2-like TF3313_1295 08ed7d5dc53a7033116db5148829bd22 216 Pfam PF12836 Helix-hairpin-helix motif 84 145 1.3E-17 T 11-10-2018 TF3313_1295 08ed7d5dc53a7033116db5148829bd22 216 Gene3D G3DSA:1.10.150.320 73 146 2.1E-13 T 11-10-2018 TF3313_1295 08ed7d5dc53a7033116db5148829bd22 216 SUPERFAMILY SSF47781 77 147 4.0E-16 T 11-10-2018 IPR010994 RuvA domain 2-like TF3313_0517 acc33100aa5926b08752d375d24d9329 206 Pfam PF01813 ATP synthase subunit D 11 190 3.9E-38 T 11-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TF3313_1125 c9c6815a4fe67a2f654c4ceac71d8168 672 Pfam PF14322 Starch-binding associating with outer membrane 107 237 5.4E-15 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_1125 c9c6815a4fe67a2f654c4ceac71d8168 672 Pfam PF07980 SusD family 360 662 5.0E-28 T 11-10-2018 IPR012944 RagB/SusD domain TF3313_1125 c9c6815a4fe67a2f654c4ceac71d8168 672 SUPERFAMILY SSF48452 22 662 2.28E-77 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2087 4a7b8fee30486a9d7a1672ca53e83b1f 128 Gene3D G3DSA:1.10.3830.10 4 124 4.6E-37 T 11-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 TF3313_2087 4a7b8fee30486a9d7a1672ca53e83b1f 128 Pfam PF01219 Prokaryotic diacylglycerol kinase 18 119 4.1E-32 T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 TF3313_0025 3f2cd37362b39462d10b14e7a61a971d 167 Gene3D G3DSA:3.40.30.10 25 165 3.2E-17 T 11-10-2018 TF3313_0025 3f2cd37362b39462d10b14e7a61a971d 167 SUPERFAMILY SSF52833 33 157 4.67E-7 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TF3313_2546 80ba5f956a14ee10420f4d6dc2436c36 245 Pfam PF06889 Protein of unknown function (DUF1266) 86 213 9.1E-20 T 11-10-2018 IPR009677 Protein of unknown function DUF1266 TF3313_1082 8d74bfb6e84f6ed194994077f520e7fb 468 Hamap MF_00675 Uronate isomerase [uxaC]. 3 468 46.13 T 11-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 TF3313_1082 8d74bfb6e84f6ed194994077f520e7fb 468 Gene3D G3DSA:1.10.2020.10 47 137 5.2E-189 T 11-10-2018 TF3313_1082 8d74bfb6e84f6ed194994077f520e7fb 468 Gene3D G3DSA:3.20.20.140 9 466 5.2E-189 T 11-10-2018 TF3313_1082 8d74bfb6e84f6ed194994077f520e7fb 468 SUPERFAMILY SSF51556 4 467 7.37E-174 T 11-10-2018 IPR032466 Metal-dependent hydrolase TF3313_1082 8d74bfb6e84f6ed194994077f520e7fb 468 Pfam PF02614 Glucuronate isomerase 4 466 8.1E-201 T 11-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 TF3313_2108 2280e8f0e46cbb19fa8170097c3b0e2b 103 Pfam PF01609 Transposase DDE domain 4 62 3.7E-6 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 TF3313_2108 2280e8f0e46cbb19fa8170097c3b0e2b 103 SUPERFAMILY SSF53098 23 62 3.87E-5 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TF3313_2771 c73e09bb201e2484386187b85af8e523 290 Gene3D G3DSA:1.20.1530.20 1 290 1.4E-22 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily TF3313_2490 a4ec115de540fc02690f9bb506456684 366 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 3 356 24.769 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 TF3313_2490 a4ec115de540fc02690f9bb506456684 366 SUPERFAMILY SSF52540 41 195 3.01E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2490 a4ec115de540fc02690f9bb506456684 366 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 12 343 7.7E-77 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 TF3313_2490 a4ec115de540fc02690f9bb506456684 366 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 16 317 3.4E-48 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 TF3313_1178 cbb1fc9c795cf9bc0c57b42c4645b566 359 Pfam PF00891 O-methyltransferase 119 322 7.8E-10 T 11-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 TF3313_1178 cbb1fc9c795cf9bc0c57b42c4645b566 359 SUPERFAMILY SSF46785 22 103 4.23E-7 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TF3313_1178 cbb1fc9c795cf9bc0c57b42c4645b566 359 Gene3D G3DSA:1.20.58.1390 107 319 7.8E-108 T 11-10-2018 TF3313_1178 cbb1fc9c795cf9bc0c57b42c4645b566 359 Gene3D G3DSA:1.10.10.10 5 102 1.1E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_1178 cbb1fc9c795cf9bc0c57b42c4645b566 359 SUPERFAMILY SSF53335 105 346 3.21E-34 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_1178 cbb1fc9c795cf9bc0c57b42c4645b566 359 Gene3D G3DSA:3.40.50.150 170 354 7.8E-108 T 11-10-2018 TF3313_2059 03a6448ef6c6a29c8357a2c4f029a54e 306 Gene3D G3DSA:3.40.1190.20 1 289 4.3E-86 T 11-10-2018 IPR029056 Ribokinase-like TF3313_2059 03a6448ef6c6a29c8357a2c4f029a54e 306 Pfam PF00294 pfkB family carbohydrate kinase 6 278 1.5E-26 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB TF3313_2059 03a6448ef6c6a29c8357a2c4f029a54e 306 SUPERFAMILY SSF53613 1 279 2.03E-55 T 11-10-2018 IPR029056 Ribokinase-like TF3313_2434 7038de9edbd5836f1757d1f5427c99a3 633 SUPERFAMILY SSF53271 316 516 5.62E-18 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like TF3313_2434 7038de9edbd5836f1757d1f5427c99a3 633 SUPERFAMILY SSF56235 8 329 1.46E-31 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TF3313_0491 1a4fbcabaa631c976d740a21c796f911 106 Pfam PF13560 Helix-turn-helix domain 22 77 1.8E-8 T 11-10-2018 TF3313_0491 1a4fbcabaa631c976d740a21c796f911 106 SUPERFAMILY SSF47413 17 81 6.72E-13 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TF3313_0491 1a4fbcabaa631c976d740a21c796f911 106 Gene3D G3DSA:1.10.260.40 14 87 5.8E-14 T 11-10-2018 TF3313_0491 1a4fbcabaa631c976d740a21c796f911 106 SMART SM00530 24 79 6.5E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TF3313_0298 fee1f70f70d3c2b2f9424e6b21108416 337 Pfam PF15869 TolB-like 6-blade propeller-like 39 307 1.0E-11 T 11-10-2018 TF3313_1328 110c04948e689475060cbe88fe43fa1c 122 Pfam PF03733 Inner membrane component domain 69 119 8.9E-18 T 11-10-2018 IPR005185 Inner membrane component domain TF3313_1328 110c04948e689475060cbe88fe43fa1c 122 Pfam PF03733 Inner membrane component domain 4 54 2.0E-17 T 11-10-2018 IPR005185 Inner membrane component domain TF3313_1328 110c04948e689475060cbe88fe43fa1c 122 PIRSF PIRSF028777 1 122 1.9E-43 T 11-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 TF3313_1626 229de53f56efe14482fe783a4c2c20e4 246 Pfam PF13568 Outer membrane protein beta-barrel domain 19 223 7.8E-32 T 11-10-2018 IPR025665 Outer membrane protein beta-barrel domain TF3313_2788 d76f6870bbde21e5647e17c1dde10657 80 Pfam PF13683 Integrase core domain 6 71 1.3E-15 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 TF3313_2788 d76f6870bbde21e5647e17c1dde10657 80 SUPERFAMILY SSF53098 2 73 2.47E-11 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TF3313_1899 49de94b8854a200e93357596e791db56 68 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 30 65 3.0E-5 T 11-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system TF3313_0574 dad1bc54ffb0091d22465ff1cc82c850 169 Pfam PF13274 Protein of unknown function (DUF4065) 31 130 1.4E-23 T 11-10-2018 IPR025272 Domain of unknown function DUF4065 TF3313_0061 2538ecf7f217ea8997ed4eca5b6778e3 392 Pfam PF17170 6-bladed beta-propeller 14 221 6.4E-19 T 11-10-2018 TF3313_2092 bcdf22622db908bf8c1e6ac5ce148116 380 Pfam PF16153 Domain of unknown function (DUF4861) 29 377 6.6E-89 T 11-10-2018 IPR032342 Protein of unknown function DUF4861 TF3313_2092 bcdf22622db908bf8c1e6ac5ce148116 380 SUPERFAMILY SSF74650 17 163 6.91E-5 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 TF3313_0551 cf3cba326120ccb90f871e75253b33da 435 Pfam PF13657 HipA N-terminal domain 5 118 8.0E-18 T 11-10-2018 IPR017508 HipA, N-terminal subdomain 1 TF3313_0551 cf3cba326120ccb90f871e75253b33da 435 Pfam PF07804 HipA-like C-terminal domain 171 405 7.2E-48 T 11-10-2018 IPR012893 HipA-like, C-terminal TF3313_1910 97a77b11437269e7d0f9c1be98d7a7ef 220 Pfam PF14064 HmuY protein 44 215 1.0E-33 T 11-10-2018 IPR025921 HmuY protein TF3313_2072 220d1a2425b7e301d0ee51287db6bdc5 379 Pfam PF16411 Outer membrane protein SusF_SusE 179 378 3.1E-25 T 11-10-2018 IPR032187 Outer membrane protein SusF/SusE GO:0019867|GO:2001070 TF3313_2072 220d1a2425b7e301d0ee51287db6bdc5 379 Gene3D G3DSA:2.60.40.3610 282 378 9.8E-35 T 11-10-2018 TF3313_2072 220d1a2425b7e301d0ee51287db6bdc5 379 Gene3D G3DSA:2.60.40.3620 164 281 3.4E-36 T 11-10-2018 TF3313_2072 220d1a2425b7e301d0ee51287db6bdc5 379 Pfam PF14292 SusE outer membrane protein 18 142 1.5E-16 T 11-10-2018 IPR025970 SusE outer membrane protein TF3313_2736 bb0af93e3372fd8639da64b04d67bbeb 66 SUPERFAMILY SSF47413 3 63 9.29E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TF3313_2736 bb0af93e3372fd8639da64b04d67bbeb 66 Pfam PF01381 Helix-turn-helix 12 57 5.3E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TF3313_2736 bb0af93e3372fd8639da64b04d67bbeb 66 SMART SM00530 1 59 2.7E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TF3313_2736 bb0af93e3372fd8639da64b04d67bbeb 66 Gene3D G3DSA:1.10.260.40 1 64 1.6E-22 T 11-10-2018 TF3313_1854 4903c9b7ad81c98dd7dc7e9f5d8c399b 419 Gene3D G3DSA:3.20.20.80 72 410 1.0E-16 T 11-10-2018 TF3313_1854 4903c9b7ad81c98dd7dc7e9f5d8c399b 419 Pfam PF14307 Glycosyltransferase WbsX 63 405 3.1E-50 T 11-10-2018 IPR032719 Glycosyltransferase WbsX TF3313_1578 00071fa2c74e51316a911b0504af643e 199 Pfam PF13568 Outer membrane protein beta-barrel domain 20 173 2.8E-20 T 11-10-2018 IPR025665 Outer membrane protein beta-barrel domain TF3313_1807 9a204cdd8d9b9285e8ba012ae27d2918 101 Pfam PF01420 Type I restriction modification DNA specificity domain 24 99 2.2E-10 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 TF3313_1807 9a204cdd8d9b9285e8ba012ae27d2918 101 SUPERFAMILY SSF116734 5 100 1.47E-16 T 11-10-2018 TF3313_1807 9a204cdd8d9b9285e8ba012ae27d2918 101 Gene3D G3DSA:3.90.220.20 2 99 5.0E-16 T 11-10-2018 TF3313_2686 d45b4ad89323bd21b2177b3fc37fe62a 416 Pfam PF12704 MacB-like periplasmic core domain 30 246 5.6E-14 T 11-10-2018 IPR025857 MacB-like periplasmic core domain TF3313_2686 d45b4ad89323bd21b2177b3fc37fe62a 416 Pfam PF02687 FtsX-like permease family 311 409 2.0E-8 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TF3313_1243 cab42d1fbf47661970778a30683c7c3f 102 Gene3D G3DSA:1.10.1660.10 46 99 2.3E-5 T 11-10-2018 TF3313_1243 cab42d1fbf47661970778a30683c7c3f 102 Pfam PF12728 Helix-turn-helix domain 50 99 1.6E-13 T 11-10-2018 TF3313_1243 cab42d1fbf47661970778a30683c7c3f 102 SUPERFAMILY SSF46955 50 98 8.24E-6 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily TF3313_2278 3f96e0ef62f197964298d10c8f58753c 330 SUPERFAMILY SSF52266 102 261 5.86E-7 T 11-10-2018 TF3313_2278 3f96e0ef62f197964298d10c8f58753c 330 Pfam PF08885 GSCFA family 23 258 4.1E-95 T 11-10-2018 IPR014982 GSCFA TF3313_2278 3f96e0ef62f197964298d10c8f58753c 330 Gene3D G3DSA:3.40.50.1110 71 263 2.3E-5 T 11-10-2018 IPR036514 SGNH hydrolase superfamily TF3313_2891 b3c46b56f851be57618bf7866ba529a8 388 Pfam PF01553 Acyltransferase 83 184 3.2E-6 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TF3313_2891 b3c46b56f851be57618bf7866ba529a8 388 SUPERFAMILY SSF69593 69 303 7.19E-5 T 11-10-2018 TF3313_2874 a0d68f59e383aa725ac54436e7723f96 285 Pfam PF13182 Protein of unknown function (DUF4007) 8 280 2.4E-75 T 11-10-2018 IPR025248 Domain of unknown function DUF4007 TF3313_1819 08080c9c8f13fe6caf0bcaeb4c1b123b 314 SUPERFAMILY SSF53474 72 314 9.48E-38 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TF3313_1819 08080c9c8f13fe6caf0bcaeb4c1b123b 314 Pfam PF00326 Prolyl oligopeptidase family 153 314 8.6E-12 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 TF3313_1819 08080c9c8f13fe6caf0bcaeb4c1b123b 314 Gene3D G3DSA:3.40.50.1820 63 313 6.6E-36 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TF3313_0565 14f9d7f1ea9246da43d8e084d6d50cfb 155 Pfam PF05105 Bacteriophage holin family 21 114 2.8E-8 T 11-10-2018 IPR006480 Bacteriophage holin family TF3313_0296 9b187781b296c09ee878ff3b6a8faca1 353 Pfam PF15869 TolB-like 6-blade propeller-like 55 323 1.3E-12 T 11-10-2018 TF3313_1589 178b2b5cdac299103c48d6ff92c6969a 162 Pfam PF04306 Protein of unknown function (DUF456) 24 160 2.1E-43 T 11-10-2018 IPR007403 Protein of unknown function DUF456 TF3313_1189 8c4d868226fe99fc67a9856991cc498f 362 TIGRFAM TIGR03513 GldL_gliding: gliding motility-associated protein GldL 21 325 1.8E-67 T 11-10-2018 IPR019852 Gliding motility-associated protein, GldL TF3313_0479 6310183c209f27fe12830c3655f295fd 485 PIRSF PIRSF006247 1 485 2.9E-155 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 TF3313_0479 6310183c209f27fe12830c3655f295fd 485 Pfam PF02386 Cation transport protein 65 476 3.5E-51 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 TF3313_1128 e1549ac801fdc61c6958b9f7bf057c0c 155 Gene3D G3DSA:2.60.40.4120 21 153 1.2E-48 T 11-10-2018 TF3313_0848 410e677844dce2de7dd8bcc0d80b3cbe 432 Pfam PF13635 Domain of unknown function (DUF4143) 237 371 9.1E-10 T 11-10-2018 IPR025420 Domain of unknown function DUF4143 TF3313_0848 410e677844dce2de7dd8bcc0d80b3cbe 432 Pfam PF13173 AAA domain 19 166 5.0E-30 T 11-10-2018 TF3313_0848 410e677844dce2de7dd8bcc0d80b3cbe 432 SUPERFAMILY SSF52540 4 218 1.52E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2155 6260d1104c5d8988dacd15c4e98a5e8b 167 Pfam PF02498 BRO family, N-terminal domain 4 37 1.2E-9 T 11-10-2018 IPR003497 BRO N-terminal domain TF3313_1693 e75c4526fa393ac989a4aa53209fa1a5 383 Gene3D G3DSA:2.40.160.60 298 378 1.5E-7 T 11-10-2018 TF3313_2485 3f25c4a9ae074db0e1e820b4ae589d5b 310 Pfam PF04018 Domain of unknown function (DUF368) 18 260 4.2E-98 T 11-10-2018 IPR007163 Protein of unknown function DUF368 TF3313_1466 90313d99dae979df7027014f8148f0b6 242 Pfam PF00881 Nitroreductase family 9 218 5.8E-27 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 TF3313_1466 90313d99dae979df7027014f8148f0b6 242 Gene3D G3DSA:3.40.109.10 2 240 8.0E-41 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TF3313_1466 90313d99dae979df7027014f8148f0b6 242 SUPERFAMILY SSF55469 1 238 7.37E-38 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TF3313_1779 7e5fb9e23308ad1cf6b0e7516606b433 99 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 1.3E-15 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 TF3313_1779 7e5fb9e23308ad1cf6b0e7516606b433 99 Gene3D G3DSA:3.30.160.100 1 98 1.2E-21 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like TF3313_1779 7e5fb9e23308ad1cf6b0e7516606b433 99 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 96 1.0E-18 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 TF3313_1779 7e5fb9e23308ad1cf6b0e7516606b433 99 SUPERFAMILY SSF69754 1 93 1.12E-21 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like TF3313_2121 ea258c1f24260141256377f98a5f7106 767 SUPERFAMILY SSF52151 22 320 3.4E-48 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase TF3313_2121 ea258c1f24260141256377f98a5f7106 767 Gene3D G3DSA:3.40.1090.20 21 101 6.7E-21 T 11-10-2018 TF3313_2121 ea258c1f24260141256377f98a5f7106 767 Gene3D G3DSA:3.40.1090.10 138 304 1.1E-14 T 11-10-2018 TF3313_2121 ea258c1f24260141256377f98a5f7106 767 Pfam PF01734 Patatin-like phospholipase 26 223 3.0E-26 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 TF3313_0598 851246bafd0d9a4781eb31a8c1562bf8 363 Pfam PF14297 Domain of unknown function (DUF4373) 11 99 4.2E-15 T 11-10-2018 IPR025400 Domain of unknown function DUF4373 TF3313_1758 6c585bfa0d054c1da11b4101b7417bc5 396 Pfam PF07787 Transmembrane protein 43 108 368 5.3E-80 T 11-10-2018 IPR012430 Transmembrane protein 43 family TF3313_0358 9f4d374e8c46fbcf06041ef6fdb934e5 327 Pfam PF14054 Domain of unknown function (DUF4249) 25 313 2.5E-26 T 11-10-2018 IPR025345 Protein of unknown function DUF4249 TF3313_2276 a98ecbb28b4dace403192c27a99d2f85 208 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 5 196 9.3E-23 T 11-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 TF3313_2276 a98ecbb28b4dace403192c27a99d2f85 208 Pfam PF04973 Nicotinamide mononucleotide transporter 5 195 1.8E-50 T 11-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 TF3313_0899 9357f07896c6feb5cee4fc9c2c79753d 155 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 150 5.4E-16 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 TF3313_1453 b92eb3970c2b9eb029a63f2865611b86 277 Gene3D G3DSA:3.40.1090.10 1 100 1.7E-26 T 11-10-2018 TF3313_1453 b92eb3970c2b9eb029a63f2865611b86 277 Gene3D G3DSA:3.40.1090.10 101 253 4.9E-22 T 11-10-2018 TF3313_1453 b92eb3970c2b9eb029a63f2865611b86 277 Pfam PF01734 Patatin-like phospholipase 13 168 4.5E-29 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 TF3313_1453 b92eb3970c2b9eb029a63f2865611b86 277 SUPERFAMILY SSF52151 8 254 2.35E-60 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase TF3313_0269 1b77cddd0579e95010134f3f7d42d298 816 Pfam PF05140 ResB-like family 74 190 9.9E-23 T 11-10-2018 IPR007816 ResB-like domain TF3313_0269 1b77cddd0579e95010134f3f7d42d298 816 Pfam PF01578 Cytochrome C assembly protein 565 769 9.1E-38 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 TF3313_1842 dbaaa548a8a40cd00576304d4c05d91d 148 Gene3D G3DSA:2.70.50.70 75 147 3.1E-17 T 11-10-2018 TF3313_1842 dbaaa548a8a40cd00576304d4c05d91d 148 Pfam PF14734 Domain of unknown function (DUF4469) with IG-like fold 79 139 1.0E-15 T 11-10-2018 IPR027824 Domain of unknown function DUF4469 with IG-like fold TF3313_1463 baf6f6d527830fd1ac8cf1ddef16da17 243 Pfam PF14196 L-2-amino-thiazoline-4-carboxylic acid hydrolase 74 220 5.2E-15 T 11-10-2018 IPR026002 L-2-amino-thiazoline-4-carboxylic acid hydrolase TF3313_2409 37432c9e1c02e0b06568f2936eef7856 148 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 11 133 1.8E-28 T 11-10-2018 TF3313_2484 119a2919bc35beb04d0e92e6c7ca89c5 184 Pfam PF14237 Domain of unknown function (DUF4339) 5 44 3.2E-10 T 11-10-2018 IPR025640 Domain of unknown function DUF4339 Reactome: R-HSA-6798695 TF3313_2484 119a2919bc35beb04d0e92e6c7ca89c5 184 Pfam PF04505 Interferon-induced transmembrane protein 100 167 5.5E-25 T 11-10-2018 IPR007593 CD225/Dispanin family GO:0016021 TF3313_0410 eba6d190b93f173728a02dfd7d342324 176 Pfam PF13787 Protein of unknown function with HXXEE motif 10 129 9.4E-21 T 11-10-2018 IPR025671 Protein of unknown function with HXXEE motif TF3313_2831 043b757abd2645a4603ac6a822d20a95 178 Pfam PF05069 Phage virion morphogenesis family 25 173 4.5E-6 T 11-10-2018 IPR006522 Phage virion morphogensis protein TF3313_2673 7caf703835826ee67e71f72633214c9b 441 Gene3D G3DSA:2.40.160.60 73 437 8.8E-14 T 11-10-2018 TF3313_2673 7caf703835826ee67e71f72633214c9b 441 SUPERFAMILY SSF56935 76 435 2.93E-12 T 11-10-2018 TF3313_1637 6f3bf8907664a05680e2f9e8231a8f67 696 Gene3D G3DSA:3.20.20.70 231 549 1.6E-68 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_2690 f8074ed0795636291656c7016861ec47 437 Gene3D G3DSA:1.10.260.180 56 332 1.8E-201 T 11-10-2018 TF3313_2690 f8074ed0795636291656c7016861ec47 437 SUPERFAMILY SSF53383 21 429 4.48E-48 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TF3313_2690 f8074ed0795636291656c7016861ec47 437 Gene3D G3DSA:3.40.640.10 104 310 1.8E-201 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TF3313_2690 f8074ed0795636291656c7016861ec47 437 Gene3D G3DSA:3.90.1150.100 5 429 1.8E-201 T 11-10-2018 TF3313_2690 f8074ed0795636291656c7016861ec47 437 Pfam PF00155 Aminotransferase class I and II 60 412 4.4E-21 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TF3313_2941 77bd33ba3998e3c4d01902336c32a1b1 214 Pfam PF06439 Domain of Unknown Function (DUF1080) 27 210 4.2E-35 T 11-10-2018 IPR010496 Domain of unknown function DUF1080 TF3313_2941 77bd33ba3998e3c4d01902336c32a1b1 214 Gene3D G3DSA:2.60.120.560 26 213 4.3E-39 T 11-10-2018 TF3313_1186 b21a3a0138dba3966c6c5c8595b3f763 73 Pfam PF11387 Protein of unknown function (DUF2795) 11 55 5.5E-17 T 11-10-2018 IPR021527 Protein of unknown function DUF2795 TF3313_1958 b385246363da30c8c39d81d2883c3d18 438 Pfam PF07075 Protein of unknown function (DUF1343) 88 431 3.3E-121 T 11-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 TF3313_1958 b385246363da30c8c39d81d2883c3d18 438 PIRSF PIRSF016719 32 335 4.7E-94 T 11-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 TF3313_1958 b385246363da30c8c39d81d2883c3d18 438 PIRSF PIRSF016719 344 432 2.6E-9 T 11-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 TF3313_1958 b385246363da30c8c39d81d2883c3d18 438 Gene3D G3DSA:3.40.50.12170 64 434 1.2E-135 T 11-10-2018 TF3313_2734 9f4510a9a94f57cebb41175c204f578f 392 Pfam PF12698 ABC-2 family transporter protein 28 373 2.2E-32 T 11-10-2018 TF3313_2139 ba22a0e98c3f7ee0ea90fb511fb86412 212 Pfam PF03787 RAMP superfamily 13 197 2.2E-19 T 11-10-2018 IPR005537 CRISPR type III-associated RAMP protein TF3313_2139 ba22a0e98c3f7ee0ea90fb511fb86412 212 TIGRFAM TIGR02582 cas7_TM1809: CRISPR type III-A/MTUBE-associated RAMP protein Csm3 6 198 1.6E-57 T 11-10-2018 IPR013412 CRISPR-associated RAMP Csm3 TF3313_0184 e06f0beda14c58610be4478d33a2d715 336 Pfam PF06379 L-rhamnose-proton symport protein (RhaT) 4 328 8.0E-46 T 11-10-2018 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 TF3313_1426 69a2d58bb453eb15f8a803134fad8384 131 Gene3D G3DSA:3.30.1370.30 1 71 1.6E-25 T 11-10-2018 TF3313_1426 69a2d58bb453eb15f8a803134fad8384 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 1 131 28.502 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1426 69a2d58bb453eb15f8a803134fad8384 131 Gene3D G3DSA:3.30.1490.10 74 131 8.3E-26 T 11-10-2018 TF3313_1426 69a2d58bb453eb15f8a803134fad8384 131 Pfam PF00410 Ribosomal protein S8 3 131 4.2E-49 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_1426 69a2d58bb453eb15f8a803134fad8384 131 SUPERFAMILY SSF56047 1 131 7.85E-45 T 11-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TF3313_0034 6ed11aee08a4864336ba720199e01ebb 626 Pfam PF12771 Starch-binding associating with outer membrane 1 274 1.4E-11 T 11-10-2018 TF3313_0034 6ed11aee08a4864336ba720199e01ebb 626 SUPERFAMILY SSF48452 18 608 7.91E-51 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_0434 636059f9b96a56f97367040100626445 124 Gene3D G3DSA:3.30.530.20 4 112 1.2E-6 T 11-10-2018 IPR023393 START-like domain superfamily TF3313_0434 636059f9b96a56f97367040100626445 124 SUPERFAMILY SSF55961 31 112 2.79E-6 T 11-10-2018 TF3313_0492 bce2a32224f27286fe99e3425f0d7d1e 422 Pfam PF07804 HipA-like C-terminal domain 180 391 5.0E-51 T 11-10-2018 IPR012893 HipA-like, C-terminal TF3313_0492 bce2a32224f27286fe99e3425f0d7d1e 422 Pfam PF13657 HipA N-terminal domain 18 104 2.5E-7 T 11-10-2018 IPR017508 HipA, N-terminal subdomain 1 TF3313_2660 ced063e0ff45c5987eb5e7da41faa740 178 Pfam PF04390 Lipopolysaccharide-assembly 39 173 9.7E-12 T 11-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 TF3313_1527 c3f047cfa6b0283767a89dc69f945339 165 Pfam PF02674 Colicin V production protein 6 151 3.0E-25 T 11-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 TF3313_1745 f51d6bccea9d4b074b2eacba2c15a62a 224 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 2 219 32.969 T 11-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 TF3313_1745 f51d6bccea9d4b074b2eacba2c15a62a 224 Pfam PF02666 Phosphatidylserine decarboxylase 49 213 2.0E-26 T 11-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 TF3313_1745 f51d6bccea9d4b074b2eacba2c15a62a 224 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 35 218 3.9E-50 T 11-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 TF3313_2063 c2ddbd7bfdd5ae43b25ae590a36efeb3 319 SUPERFAMILY SSF53850 97 318 5.97E-42 T 11-10-2018 TF3313_2063 c2ddbd7bfdd5ae43b25ae590a36efeb3 319 Gene3D G3DSA:3.40.190.10 145 279 4.3E-45 T 11-10-2018 TF3313_2063 c2ddbd7bfdd5ae43b25ae590a36efeb3 319 Gene3D G3DSA:3.40.190.10 99 316 4.3E-45 T 11-10-2018 TF3313_2063 c2ddbd7bfdd5ae43b25ae590a36efeb3 319 Pfam PF12849 PBP superfamily domain 101 249 1.7E-21 T 11-10-2018 IPR024370 PBP domain TF3313_0719 a1925ff074bffb0832ae579ea14fe03c 277 Pfam PF11777 Protein of unknown function (DUF3316) 2 135 6.5E-28 T 11-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 TF3313_0277 f65361f2f48a7f374e25bb8ea3d314e6 290 Pfam PF08323 Starch synthase catalytic domain 26 250 4.3E-51 T 11-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 TF3313_0277 f65361f2f48a7f374e25bb8ea3d314e6 290 SUPERFAMILY SSF53756 26 258 9.87E-22 T 11-10-2018 TF3313_0277 f65361f2f48a7f374e25bb8ea3d314e6 290 Gene3D G3DSA:3.40.50.2000 26 267 2.7E-45 T 11-10-2018 TF3313_2049 03a1460753404a01eaa0b884d7d99476 750 Gene3D G3DSA:2.60.40.1120 10 93 2.3E-5 T 11-10-2018 TF3313_2049 03a1460753404a01eaa0b884d7d99476 750 SUPERFAMILY SSF49464 11 111 2.35E-11 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TF3313_2049 03a1460753404a01eaa0b884d7d99476 750 Pfam PF13715 CarboxypepD_reg-like domain 12 101 1.4E-9 T 11-10-2018 TF3313_2444 d15e0f489267d0852ab0f93c79fdb0c1 421 Pfam PF16115 Domain of unknown function (DUF4831) 99 417 3.4E-120 T 11-10-2018 IPR032265 Protein of unknown function DUF4831 TF3313_0331 42cbf8c4cda415b68d1b4fdb05f4c312 210 Pfam PF03458 UPF0126 domain 16 89 1.8E-20 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 TF3313_0331 42cbf8c4cda415b68d1b4fdb05f4c312 210 Pfam PF03458 UPF0126 domain 100 174 1.0E-20 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 TF3313_0386 6b723675cb2fc90a69c84560fbc94af1 249 Pfam PF11810 Domain of unknown function (DUF3332) 72 234 1.7E-54 T 11-10-2018 IPR021768 Protein of unknown function DUF3332 TF3313_1129 d2a23012f3465cb2b364877ba767cc44 619 Pfam PF14322 Starch-binding associating with outer membrane 24 212 5.2E-15 T 11-10-2018 IPR033985 SusD-like, N-terminal TF3313_1129 d2a23012f3465cb2b364877ba767cc44 619 Pfam PF07980 SusD family 263 618 2.4E-39 T 11-10-2018 IPR012944 RagB/SusD domain TF3313_1129 d2a23012f3465cb2b364877ba767cc44 619 SUPERFAMILY SSF48452 20 618 5.44E-85 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1554 6103c79e121becca01ff1c0d452a1eb3 360 Pfam PF00534 Glycosyl transferases group 1 177 327 5.1E-20 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 TF3313_1554 6103c79e121becca01ff1c0d452a1eb3 360 Gene3D G3DSA:3.40.50.2000 172 338 1.4E-25 T 11-10-2018 TF3313_1554 6103c79e121becca01ff1c0d452a1eb3 360 Pfam PF13439 Glycosyltransferase Family 4 49 155 6.1E-10 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 TF3313_1554 6103c79e121becca01ff1c0d452a1eb3 360 SUPERFAMILY SSF53756 38 349 1.69E-47 T 11-10-2018 TF3313_1554 6103c79e121becca01ff1c0d452a1eb3 360 Gene3D G3DSA:3.40.50.2000 32 171 4.6E-10 T 11-10-2018 TF3313_2097 daf7eba7215f4079d2101bc6ee2a1ca9 223 Pfam PF01081 KDPG and KHG aldolase 12 208 2.4E-33 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 TF3313_2097 daf7eba7215f4079d2101bc6ee2a1ca9 223 Gene3D G3DSA:3.20.20.70 2 223 1.0E-66 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TF3313_2097 daf7eba7215f4079d2101bc6ee2a1ca9 223 SUPERFAMILY SSF51569 6 217 2.93E-55 T 11-10-2018 TF3313_1755 dac9608f461370aa65a9b27988c01d5b 609 Pfam PF09972 Predicted membrane protein (DUF2207) 26 475 4.0E-17 T 11-10-2018 IPR018702 Protein of unknown function DUF2207, membrane TF3313_1755 dac9608f461370aa65a9b27988c01d5b 609 Pfam PF09972 Predicted membrane protein (DUF2207) 480 537 1.1E-13 T 11-10-2018 IPR018702 Protein of unknown function DUF2207, membrane TF3313_1048 57e97fe0d1e0d87143af68edc7a1b463 104 Pfam PF14114 Domain of unknown function (DUF4286) 3 100 5.0E-22 T 11-10-2018 IPR025563 Protein of unknown function DUF4286 TF3313_0988 fda39212915ebb0379bb7b50fe27bb7b 441 SUPERFAMILY SSF53756 184 289 4.81E-6 T 11-10-2018 TF3313_2577 34bb7f4a72929b35cc3b38bd3316f737 251 Pfam PF14129 Domain of unknown function (DUF4296) 26 108 2.1E-20 T 11-10-2018 IPR025381 Domain of unknown function DUF4296 TF3313_2256 7e7f7891f87a078261788f02fbfe01aa 95 Gene3D G3DSA:3.40.1580.10 3 91 1.1E-9 T 11-10-2018 IPR037883 Knr4/Smi1-like domain superfamily TF3313_2256 7e7f7891f87a078261788f02fbfe01aa 95 SUPERFAMILY SSF160631 4 86 1.96E-8 T 11-10-2018 TF3313_0040 8885d0f24fd655ca8399bcf375a2c6b6 438 Pfam PF08486 Stage II sporulation protein 97 215 1.7E-32 T 11-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal TF3313_0040 8885d0f24fd655ca8399bcf375a2c6b6 438 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 103 434 1.5E-46 T 11-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 TF3313_0436 7ac5390f9c61de9a871e13e67dde8a02 155 SUPERFAMILY SSF50022 54 152 1.09E-7 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 TF3313_0436 7ac5390f9c61de9a871e13e67dde8a02 155 Gene3D G3DSA:2.102.10.10 39 155 2.5E-8 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 TF3313_2360 4fd8c39e0794842aa07482b57fd2395e 519 Gene3D G3DSA:2.60.40.10 379 506 5.4E-8 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_2360 4fd8c39e0794842aa07482b57fd2395e 519 Pfam PF11551 Outer membrane protein Omp28 340 512 6.1E-18 T 11-10-2018 IPR021615 Outer membrane protein Omp28 TF3313_2360 4fd8c39e0794842aa07482b57fd2395e 519 SUPERFAMILY SSF49373 32 110 9.94E-5 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments TF3313_2069 a03bf40194d0bb21020fcf920903f41e 372 Pfam PF12698 ABC-2 family transporter protein 23 361 2.4E-43 T 11-10-2018 TF3313_0310 9aff413bd2dfff70b4efa7598b16d800 82 Pfam PF14055 NVEALA protein 4 44 4.0E-12 T 11-10-2018 IPR025905 NVEALA protein TF3313_2153 ba0cd31a3abbdc96461118c46532f20e 430 Pfam PF06074 Protein of unknown function (DUF935) 201 418 8.0E-24 T 11-10-2018 IPR009279 Protein of unknown function DUF935 TF3313_2467 fd363e9ce8d2d34492ffc0c131436d58 78 Pfam PF14055 NVEALA protein 4 58 1.6E-11 T 11-10-2018 IPR025905 NVEALA protein TF3313_1240 3c259835a83ca901f7588f1eaea178d6 78 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 43 75 6.1E-10 T 11-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system TF3313_1240 3c259835a83ca901f7588f1eaea178d6 78 Gene3D G3DSA:3.10.450.620 32 76 2.3E-5 T 11-10-2018 TF3313_0308 fca08f5b66fd24e929d23ce2cdcf8e2b 361 Pfam PF15869 TolB-like 6-blade propeller-like 35 335 1.4E-13 T 11-10-2018 TF3313_2634 1319481b47dbcf974ee43c8591d94350 188 Pfam PF06930 Protein of unknown function (DUF1282) 13 168 2.0E-11 T 11-10-2018 IPR009698 Protein of unknown function DUF1282 TF3313_1654 3ad8b3d6840b066e6f93cefb209226a4 119 SUPERFAMILY SSF116846 27 96 9.55E-6 T 11-10-2018 IPR036181 MIT domain superfamily TF3313_2953 26257a8774fbc03200eed03e1d3b4977 507 Pfam PF14052 Capsule assembly protein Wzi 89 435 9.2E-32 T 11-10-2018 IPR026950 Capsule assembly protein Wzi TF3313_2953 26257a8774fbc03200eed03e1d3b4977 507 Gene3D G3DSA:2.40.160.130 140 392 1.1E-9 T 11-10-2018 IPR038636 Capsule assembly protein Wzi superfamily TF3313_2752 d8ef9e43c2f659307e7ad3cf7bbaf370 306 Pfam PF01066 CDP-alcohol phosphatidyltransferase 45 110 4.9E-13 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TF3313_2752 d8ef9e43c2f659307e7ad3cf7bbaf370 306 Gene3D G3DSA:1.20.120.1760 14 172 6.1E-29 T 11-10-2018 TF3313_0294 2b0531398f4849cc858f64db3ffa69c7 378 Pfam PF13970 Domain of unknown function (DUF4221) 12 332 2.2E-25 T 11-10-2018 IPR025316 Protein of unknown function DUF4221 TF3313_0550 b600dae0c5bc1fd5cc9916776196ee25 68 Pfam PF05598 Transposase domain (DUF772) 23 63 1.5E-10 T 11-10-2018 IPR008490 Transposase InsH, N-terminal TF3313_0314 b584f6582bf66cbea6143834b3493bd9 361 Pfam PF15869 TolB-like 6-blade propeller-like 35 335 2.9E-13 T 11-10-2018 TF3313_1614 4da90937fb60d398ae623432e636f83a 292 PIRSF PIRSF003097 6 284 3.7E-63 T 11-10-2018 IPR004513 Cell division protein FtsX GO:0016021 TF3313_1614 4da90937fb60d398ae623432e636f83a 292 Gene3D G3DSA:3.30.70.3040 40 150 2.6E-5 T 11-10-2018 TF3313_0055 b54193d1968174c0444cb6d13cdba2a5 335 Pfam PF17170 6-bladed beta-propeller 2 112 9.8E-16 T 11-10-2018 TF3313_0931 eed6fcec93a1e837af9094bc2aacbdc5 156 Pfam PF07610 Protein of unknown function (DUF1573) 56 151 5.4E-36 T 11-10-2018 IPR011467 Protein of unknown function DUF1573 TF3313_0931 eed6fcec93a1e837af9094bc2aacbdc5 156 Gene3D G3DSA:2.60.40.10 45 151 9.5E-16 T 11-10-2018 IPR013783 Immunoglobulin-like fold TF3313_1441 a8c5a0969b5deabba6ff6ca32d647485 247 Pfam PF02405 Permease MlaE 33 244 3.2E-61 T 11-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 TF3313_1229 e571d97be4ea0acfb200c0b20b924f92 96 Pfam PF12964 Protein of unknown function (DUF3853) 2 96 1.5E-41 T 11-10-2018 IPR024363 Protein of unknown function DUF3853 TF3313_0878 045b085ec47f5ddc5860d22a52ad747d 411 PIRSF PIRSF036542 2 410 1.2E-181 T 11-10-2018 IPR011415 Predicted bifunctional spore maturation protein, fused SpmA/SpmB TF3313_0878 045b085ec47f5ddc5860d22a52ad747d 411 Pfam PF07670 Nucleoside recognition 52 158 2.9E-10 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 TF3313_0374 94fdbe95ee1030be5953952cb162e809 283 SUPERFAMILY SSF58100 62 156 7.32E-5 T 11-10-2018 TF3313_2789 24c9cb17a72017cb6630eaea4e4a12d5 261 SUPERFAMILY SSF53098 167 257 6.26E-21 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TF3313_2789 24c9cb17a72017cb6630eaea4e4a12d5 261 Pfam PF00665 Integrase core domain 174 254 5.2E-16 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 TF3313_2789 24c9cb17a72017cb6630eaea4e4a12d5 261 Gene3D G3DSA:3.30.420.10 166 260 3.4E-11 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TF3313_2839 77891fa7db6922f8f00c2595f230e5af 124 Gene3D G3DSA:3.40.50.1000 1 122 9.7E-40 T 11-10-2018 IPR023214 HAD superfamily TF3313_2839 77891fa7db6922f8f00c2595f230e5af 124 SUPERFAMILY SSF56784 1 106 7.7E-27 T 11-10-2018 IPR036412 HAD-like superfamily TF3313_2839 77891fa7db6922f8f00c2595f230e5af 124 PIRSF PIRSF020079 1 124 6.7E-41 T 11-10-2018 IPR016769 Bacteriophage SP01, Orf1 TF3313_2150 45ab83d53ec151c28afcfa79f9d31a7f 161 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 15 61 3.0E-4 T 11-10-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 TF3313_1775 de400462ff5fb05abd8a190564fd5fbc 377 SUPERFAMILY SSF56300 51 303 6.64E-35 T 11-10-2018 TF3313_1775 de400462ff5fb05abd8a190564fd5fbc 377 SMART SM00854 51 298 1.7E-60 T 11-10-2018 IPR019079 Capsule synthesis protein, CapA TF3313_1775 de400462ff5fb05abd8a190564fd5fbc 377 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 52 298 4.0E-55 T 11-10-2018 IPR019079 Capsule synthesis protein, CapA TF3313_0056 1d41ef9c18b0592198b9c7f83991601c 197 Pfam PF01609 Transposase DDE domain 17 160 5.5E-9 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 TF3313_2356 f181c20d0b9a6d4c280d5439a48dda30 230 Pfam PF01814 Hemerythrin HHE cation binding domain 108 221 3.8E-8 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 TF3313_2356 f181c20d0b9a6d4c280d5439a48dda30 230 Gene3D G3DSA:1.20.120.520 84 230 1.2E-7 T 11-10-2018 TF3313_2307 35675822fa932e93da06745a5ec47d3b 103 Pfam PF14898 Domain of unknown function (DUF4491) 9 99 3.6E-42 T 11-10-2018 IPR027890 Protein of unknown function DUF4491 TF3313_1089 4abcd413c07317e70d3c0139fa39b2dd 235 Pfam PF01944 Stage II sporulation protein M 11 189 2.1E-35 T 11-10-2018 IPR002798 Stage II sporulation protein M-like TF3313_0124 41a07afaa4be51723c95869cba555ac5 776 Pfam PF12704 MacB-like periplasmic core domain 17 234 5.1E-15 T 11-10-2018 IPR025857 MacB-like periplasmic core domain TF3313_0124 41a07afaa4be51723c95869cba555ac5 776 Pfam PF02687 FtsX-like permease family 311 402 6.8E-8 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TF3313_0301 6904939bb75f4e2637e376e9195af0ae 87 Pfam PF14055 NVEALA protein 4 50 2.1E-14 T 11-10-2018 IPR025905 NVEALA protein TF3313_0072 9471ed525f3d15907c31989b7ad0fa1a 320 Pfam PF01963 TraB family 36 318 4.6E-46 T 11-10-2018 IPR002816 Pheromone shutdown, TraB TF3313_2362 7695fa68f33a7cb0a11a83e810007de6 143 Pfam PF03724 META domain 32 138 6.2E-15 T 11-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ TF3313_2362 7695fa68f33a7cb0a11a83e810007de6 143 Gene3D G3DSA:2.40.128.270 26 142 2.3E-11 T 11-10-2018 IPR038670 HslJ-like superfamily TF3313_1461 23e004d40f21365bcf3350e1a8fe2d4b 404 Gene3D G3DSA:2.130.10.10 77 342 9.5E-7 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TF3313_1004 d542b23a143407c8be859c9659a6095b 483 Pfam PF13440 Polysaccharide biosynthesis protein 35 325 1.8E-73 T 11-10-2018 TF3313_1662 5161ad448bdd3501bd95361a62fa3fc8 216 SUPERFAMILY SSF55729 45 145 4.76E-10 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TF3313_1662 5161ad448bdd3501bd95361a62fa3fc8 216 Gene3D G3DSA:3.40.630.30 32 154 3.1E-8 T 11-10-2018 TF3313_0052 f735da22d120a3cefb3576d38010c5aa 452 SUPERFAMILY SSF69304 87 206 1.03E-5 T 11-10-2018 TF3313_0987 5c2bfff095b8cc39fed571ef113b5518 254 SUPERFAMILY SSF53335 15 239 4.14E-31 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TF3313_0987 5c2bfff095b8cc39fed571ef113b5518 254 Gene3D G3DSA:3.40.50.150 22 212 6.6E-29 T 11-10-2018 TF3313_0987 5c2bfff095b8cc39fed571ef113b5518 254 Pfam PF13489 Methyltransferase domain 28 194 6.0E-20 T 11-10-2018 TF3313_2606 0e69ae5ae575bd1eb7906a9f79a6bd20 297 Gene3D G3DSA:3.10.310.50 41 127 2.2E-8 T 11-10-2018 TF3313_0188 059d0aa7612ef12e0bac5476c59963a4 118 Pfam PF11325 Domain of unknown function (DUF3127) 2 87 1.3E-34 T 11-10-2018 IPR021474 Protein of unknown function DUF3127 TF3313_0914 e14c2281364c063a0d0e6b2ab7225906 389 Pfam PF13306 Leucine rich repeats (6 copies) 174 285 4.0E-31 T 11-10-2018 IPR026906 Leucine rich repeat 5 TF3313_0914 e14c2281364c063a0d0e6b2ab7225906 389 Pfam PF13306 Leucine rich repeats (6 copies) 67 143 2.9E-21 T 11-10-2018 IPR026906 Leucine rich repeat 5 TF3313_0914 e14c2281364c063a0d0e6b2ab7225906 389 SUPERFAMILY SSF52058 81 271 7.48E-18 T 11-10-2018 TF3313_0914 e14c2281364c063a0d0e6b2ab7225906 389 Gene3D G3DSA:3.80.10.10 24 306 5.4E-83 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily TF3313_0043 79463b837e9aba45ecc5f2270cd6076a 390 Pfam PF07786 Protein of unknown function (DUF1624) 11 239 2.6E-7 T 11-10-2018 IPR012429 Domain of unknown function DUF1624 Reactome: R-HSA-2024096|Reactome: R-HSA-2206291|Reactome: R-HSA-6798695 TF3313_2722 c8cc51d719cb9ebd2e497fec5ce8feb6 177 Pfam PF02417 Chromate transporter 6 173 5.1E-46 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 TF3313_0663 9b6cc9bd881e1101dd73658f2b56e970 404 Pfam PF13289 SIR2-like domain 161 312 7.5E-23 T 11-10-2018 IPR039444 SIR2-like domain TF3313_0663 9b6cc9bd881e1101dd73658f2b56e970 404 SUPERFAMILY SSF52467 143 307 8.66E-5 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily TF3313_0424 a1fdfe6ffd847628f463b3ecf07aa00a 377 Pfam PF06250 Protein of unknown function (DUF1016) 40 369 5.2E-83 T 11-10-2018 IPR009362 Protein of unknown function DUF1016 TF3313_2437 0286ffc9cce09413b3ebee2284d05341 97 Gene3D G3DSA:3.30.70.120 1 96 6.4E-14 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal TF3313_2437 0286ffc9cce09413b3ebee2284d05341 97 SUPERFAMILY SSF54913 1 96 2.64E-12 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta TF3313_0539 13936270732d22fbe75ef07d5a8bc189 243 Pfam PF14093 Domain of unknown function (DUF4271) 25 229 6.5E-38 T 11-10-2018 IPR025367 Protein of unknown function DUF4271 TF3313_1720 9e1dbc51d2aab5b18b98933bfe7be504 265 Pfam PF12873 Domain of unknown function (DUF3825) 29 262 1.6E-74 T 11-10-2018 IPR024437 Domain of unknown function DUF3825 TF3313_2250 e8bdf0089bbc55794006d085ba015cdf 89 Pfam PF03400 IS1 transposase 12 74 2.1E-8 T 11-10-2018 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 TF3313_2203 e8bdf0089bbc55794006d085ba015cdf 89 Pfam PF03400 IS1 transposase 12 74 2.1E-8 T 11-10-2018 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 TF3313_2721 4307c080d96e7e557a72d0d5853b5a66 184 Pfam PF02417 Chromate transporter 10 174 1.3E-44 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 TF3313_0193 bd3049c3df4506ad2b57852c42c1d720 224 Pfam PF04011 LemA family 45 224 7.7E-67 T 11-10-2018 IPR007156 LemA TF3313_0193 bd3049c3df4506ad2b57852c42c1d720 224 Gene3D G3DSA:1.20.1440.20 54 224 3.3E-61 T 11-10-2018 IPR023353 LemA-like domain superfamily TF3313_0193 bd3049c3df4506ad2b57852c42c1d720 224 SUPERFAMILY SSF140478 63 209 6.67E-55 T 11-10-2018 IPR023353 LemA-like domain superfamily TF3313_0901 b7d7fe2d4203d881e4ee2a20302c833d 387 PIRSF PIRSF015658 6 386 9.4E-165 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 TF3313_0901 b7d7fe2d4203d881e4ee2a20302c833d 387 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 29 384 2.6E-150 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 TF3313_0901 b7d7fe2d4203d881e4ee2a20302c833d 387 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 28 380 2.7E-145 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 TF3313_2876 954409c84b6d7370fe6bea753cf3b2ea 368 Gene3D G3DSA:3.40.50.620 2 153 1.5E-16 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TF3313_2876 954409c84b6d7370fe6bea753cf3b2ea 368 SUPERFAMILY SSF52402 5 125 7.28E-13 T 11-10-2018 TF3313_1521 a49dd9ec6d4b57cc9acacd512149213c 632 Pfam PF03739 Predicted permease YjgP/YjgQ family 10 451 9.8E-109 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 TF3313_0678 db7ced93f6d7198d6e13d929b9ac158d 187 Pfam PF13358 DDE superfamily endonuclease 1 148 1.2E-28 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain TF3313_1723 6664bc4e145634d7287da86d82f0c2dd 204 Pfam PF14127 Domain of unknown function (DUF4294) 46 197 3.6E-63 T 11-10-2018 IPR025636 Protein of unknown function DUF4294 TF3313_1615 d9e6b89063c6f6d01415f6e41d90d4d7 84 Pfam PF11297 Protein of unknown function (DUF3098) 5 69 1.4E-27 T 11-10-2018 IPR021448 Protein of unknown function DUF3098 TF3313_1470 0a0279fda87c8957ecdd0ca576e40266 187 Gene3D G3DSA:1.20.120.1630 17 187 1.3E-19 T 11-10-2018 TF3313_1470 0a0279fda87c8957ecdd0ca576e40266 187 Pfam PF04191 Phospholipid methyltransferase 79 172 2.8E-14 T 11-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 TF3313_1652 f4e904fd90bc8354a2364729a4ba67c4 412 Pfam PF14391 Domain of unknown function (DUF4421) 103 395 3.2E-57 T 11-10-2018 IPR025535 Protein of unknown function DUF4421 TF3313_1365 9f5393fa5fae0f11e8af68a415005f1a 534 Pfam PF13100 OstA-like protein 32 194 2.9E-65 T 11-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal TF3313_2023 058f5b8446b2ec3e642c6c2160c3d747 487 Pfam PF03929 PepSY-associated TM region 9 275 4.4E-15 T 11-10-2018 IPR005625 PepSY-associated TM protein TF3313_2740 291f17367b3047b5e96b143179f42432 392 SUPERFAMILY SSF52540 27 160 7.8E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TF3313_2740 291f17367b3047b5e96b143179f42432 392 Pfam PF13173 AAA domain 31 155 8.0E-23 T 11-10-2018 TF3313_0686 00944a7dfb09e7634008137b0abd6e41 794 SUPERFAMILY SSF48452 207 275 2.16E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_2379 5d61965e2ea7a38c8e933e08a4aca98f 451 Pfam PF04468 PSP1 C-terminal conserved region 107 192 2.0E-25 T 11-10-2018 IPR007557 PSP1, C-terminal TF3313_2854 7f459d25fbd1796b005fdaa41f68e71a 296 Pfam PF12508 Conjugative transposon, TraM 119 287 1.3E-39 T 11-10-2018 IPR022187 Conjugative transposon, TraM TF3313_2130 5692039e23583770d2b0d42a27871d7b 513 TIGRFAM TIGR03487 cas_csp2: CRISPR-associated protein Cas8c/Csp2, subtype PGING 4 486 4.0E-295 T 11-10-2018 IPR020029 CRISPR-associated protein Csp2 TF3313_2183 3289e8d96bc542bb5738c79e984748e9 231 Pfam PF13568 Outer membrane protein beta-barrel domain 14 196 6.0E-26 T 11-10-2018 IPR025665 Outer membrane protein beta-barrel domain TF3313_2385 a9b6c89fc0725b4f6b9a0ccf132e86f3 193 Pfam PF13635 Domain of unknown function (DUF4143) 44 132 8.5E-13 T 11-10-2018 IPR025420 Domain of unknown function DUF4143 TF3313_1738 843e034968a877a36fce7ecfd09f190d 402 SUPERFAMILY SSF56059 157 331 4.8E-9 T 11-10-2018 TF3313_0420 7768d4a66b0600647e1e2565bbd444ee 193 Pfam PF14253 Bacteriophage abortive infection AbiH 20 154 3.1E-21 T 11-10-2018 IPR025935 Bacteriophage abortive infection AbiH TF3313_2215 eaa01ab66ac5402e4314bf8bc0b34566 377 SUPERFAMILY SSF51126 26 368 2.39E-5 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor TF3313_1235 3a169ff1584faf2a1cbed2592dd6cdd5 377 Pfam PF01548 Transposase 8 151 9.2E-19 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 TF3313_1503 5b900a7e19b843d5f377bc41608e852c 353 SUPERFAMILY SSF48452 254 323 9.76E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TF3313_1907 432d95b140a3ed2348501a6897a13ea0 1461 Pfam PF02514 CobN/Magnesium Chelatase 125 1351 0.0 T 11-10-2018 IPR003672 CobN/magnesium chelatase GO:0009058 TF3313_0297 b5c77192b0840952091fbb4e843f1afa 656 Gene3D G3DSA:2.60.120.260 489 630 3.2E-6 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily TF3313_0297 b5c77192b0840952091fbb4e843f1afa 656 SUPERFAMILY SSF54001 134 260 2.75E-6 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TF3313_1715 4f1a6be47f2b5ffa399ecb145771dac5 300 Pfam PF02517 CAAX protease self-immunity 145 235 3.9E-14 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 TF3313_1940 b9dba290ec558ccc4f9d0ceff948b144 66 Gene3D G3DSA:1.10.10.10 1 66 4.5E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TF3313_1940 b9dba290ec558ccc4f9d0ceff948b144 66 Pfam PF10771 Winged helix-turn-helix domain (DUF2582) 3 63 1.7E-21 T 11-10-2018 IPR019707 Winged helix-turn-helix domain (DUF2582) TF3313_2644 9c641cb2743b07d6e209ba4264f138fb 298 Pfam PF06889 Protein of unknown function (DUF1266) 116 295 1.3E-39 T 11-10-2018 IPR009677 Protein of unknown function DUF1266 TF3313_0961 f9cea25b5a3e6c1142f47168ded63242 152 TIGRFAM TIGR02826 RNR_activ_nrdG3: anaerobic ribonucleoside-triphosphate reductase activating protein 3 147 8.2E-56 T 11-10-2018 IPR014191 Anaerobic ribonucleoside-triphosphate reductase activator TF3313_2636 96a4d27e92f99d789f7c2686aafff0ef 319 Pfam PF07670 Nucleoside recognition 25 84 5.1E-6 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 TF3313_1673 a82086e8083af2c85f02bef390e82458 425 Pfam PF12698 ABC-2 family transporter protein 20 414 4.1E-31 T 11-10-2018 TF3313_1641 6e8ca03851d336d4240618a165d21b08 384 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 9 366 2.5E-72 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 TF3313_0236 14471febd89979ceb1c986c3d8115b22 157 SUPERFAMILY SSF47729 38 118 6.33E-7 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 TF3313_2601 42d704973068895b4762302a0d03d0ef 494 SUPERFAMILY SSF51126 47 384 5.39E-26 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor TF3313_1497 05bc0cb76d2dd3f9dd1c6f7668efa380 229 TIGRFAM TIGR02046 sdhC_b558_fam: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 6 224 2.5E-58 T 11-10-2018 IPR011138 Succinate dehydrogenase cytochrome b558 subunit TF3313_1497 05bc0cb76d2dd3f9dd1c6f7668efa380 229 SUPERFAMILY SSF81343 1 224 1.83E-39 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TF3313_1497 05bc0cb76d2dd3f9dd1c6f7668efa380 229 Gene3D G3DSA:1.20.1300.10 4 227 4.2E-25 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TF3313_1382 f4945dbf9c77715aca2396f26edaa5b3 276 Pfam PF14125 Domain of unknown function (DUF4292) 56 265 5.5E-45 T 11-10-2018 IPR025634 Protein of unknown function DUF4292 TF3313_0168 f5c93844ac141e94a4e53841934da0d3 521 Gene3D G3DSA:3.30.70.2230 221 377 1.5E-10 T 11-10-2018 TF3313_1492 fed50b4de0088f072cc0e2dc9026fadd 382 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 286 373 1.9E-9 T 11-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain TF3313_1396 604b6c929d5241d92ed8dc322513fec0 228 Pfam PF04298 Putative neutral zinc metallopeptidase 5 222 8.9E-91 T 11-10-2018 IPR007395 Putative neutral zinc metallopeptidase TF3313_0656 280269175004cae1dc9a9096c455481a 118 Pfam PF12728 Helix-turn-helix domain 46 92 2.5E-11 T 11-10-2018 TF3313_2102 4b895a67fb9f8d177c2b49efadf63788 197 Gene3D G3DSA:2.40.420.20 117 193 6.5E-11 T 11-10-2018