BFO_0001 PF00308 Bacterial dnaA protein BFO_0001 PF08299 Bacterial dnaA protein helix-turn-helix BFO_0001 PF11638 DnaA N-terminal domain BFO_0002 PF12704 MacB-like periplasmic core domain BFO_0003 PF01245 Ribosomal protein L19 BFO_0004 PF00144 Beta-lactamase BFO_0004 PF00933 Glycosyl hydrolase family 3 N terminal domain BFO_0006 PF01553 Acyltransferase BFO_0007 PF13450 NAD(P)-binding Rossmann-like domain BFO_0008 PF00109 Beta-ketoacyl synthase, N-terminal domain BFO_0008 PF02801 Beta-ketoacyl synthase, C-terminal domain BFO_0009 PF13472 GDSL-like Lipase/Acylhydrolase family BFO_0009 PF14606 GDSL-like Lipase/Acylhydrolase family BFO_0009 PF14607 N-terminus of Esterase_SGNH_hydro-type BFO_0011 PF01431 Peptidase family M13 BFO_0011 PF05649 Peptidase family M13 BFO_0012 PF11644 Protein of unknown function (DUF3256) BFO_0014 PF01497 Periplasmic binding protein BFO_0015 PF01032 FecCD transport family BFO_0016 PF00005 ABC transporter BFO_0017 PF13715 BFO_0017 BFO_0018 PF09685 BFO_0018 BFO_0018 PF09851 BFO_0018 BFO_0019 PF00175 Oxidoreductase NAD-binding domain BFO_0019 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BFO_0020 PF01180 Dihydroorotate dehydrogenase BFO_0021 PF13202 EF hand BFO_0022 PF00326 Prolyl oligopeptidase family BFO_0023 PF02308 BFO_0023 BFO_0025 PF01416 tRNA pseudouridine synthase BFO_0026 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BFO_0026 PF07685 CobB/CobQ-like glutamine amidotransferase domain BFO_0027 PF00892 EamA-like transporter family BFO_0028 PF00759 Glycosyl hydrolase family 9 BFO_0028 PF01522 Polysaccharide deacetylase BFO_0028 PF02927 N-terminal ig-like domain of cellulase BFO_0029 PF12771 Starch-binding associating with outer membrane BFO_0030 PF00593 TonB dependent receptor BFO_0030 PF07715 TonB-dependent Receptor Plug Domain BFO_0030 PF13715 BFO_0030 BFO_0032 PF12771 Starch-binding associating with outer membrane BFO_0033 PF07715 TonB-dependent Receptor Plug Domain BFO_0033 PF13715 BFO_0033 BFO_0036 PF00535 Glycosyl transferase family 2 BFO_0037 PF16269 BFO_0037 BFO_0038 PF08486 BFO_0038 BFO_0039 PF03092 BFO_0039 BFO_0040 PF07075 Protein of unknown function (DUF1343) BFO_0041 PF07786 BFO_0041 BFO_0043 PF03061 Thioesterase superfamily BFO_0043 PF08282 haloacid dehalogenase-like hydrolase BFO_0044 PF01380 SIS domain BFO_0046 PF03572 Peptidase family S41 BFO_0048 PF05147 Lanthionine synthetase C-like protein BFO_0051 PF13701 BFO_0051 BFO_0055 PF17170 BFO_0055 BFO_0056 PF01609 Transposase DDE domain BFO_0060 PF04055 Radical SAM superfamily BFO_0067 PF05147 Lanthionine synthetase C-like protein BFO_0068 PF00534 Glycosyl transferases group 1 BFO_0073 PF17170 BFO_0073 BFO_0078 PF17170 BFO_0078 BFO_0079 PF04055 Radical SAM superfamily BFO_0079 PF13353 4Fe-4S single cluster domain BFO_0082 PF00664 ABC transporter transmembrane region BFO_0082 PF03412 Peptidase C39 family BFO_0086 PF04055 Radical SAM superfamily BFO_0086 PF13353 4Fe-4S single cluster domain BFO_0087 PF03572 Peptidase family S41 BFO_0088 PF00664 ABC transporter transmembrane region BFO_0088 PF03412 Peptidase C39 family BFO_0089 PF01963 BFO_0089 BFO_0090 PF01963 BFO_0090 BFO_0092 PF00534 Glycosyl transferases group 1 BFO_0092 PF13439 Glycosyltransferase Family 4 BFO_0093 PF04397 LytTr DNA-binding domain BFO_0094 PF00665 Integrase core domain BFO_0094 PF13384 Homeodomain-like domain BFO_0096 PF05147 Lanthionine synthetase C-like protein BFO_0097 PF03572 Peptidase family S41 BFO_0099 PF17170 BFO_0099 BFO_0100 PF04055 Radical SAM superfamily BFO_0100 PF13353 4Fe-4S single cluster domain BFO_0102 PF00664 ABC transporter transmembrane region BFO_0102 PF03412 Peptidase C39 family BFO_0104 PF00534 Glycosyl transferases group 1 BFO_0105 PF05147 Lanthionine synthetase C-like protein BFO_0107 PF01963 BFO_0107 BFO_0108 PF08240 Alcohol dehydrogenase GroES-like domain BFO_0111 PF00005 ABC transporter BFO_0111 PF00664 ABC transporter transmembrane region BFO_0111 PF03412 Peptidase C39 family BFO_0112 PF13437 HlyD family secretion protein BFO_0113 PF05147 Lanthionine synthetase C-like protein BFO_0114 PF02709 N-terminal domain of galactosyltransferase BFO_0118 PF00152 tRNA synthetases class II (D, K and N) BFO_0118 PF01336 OB-fold nucleic acid binding domain BFO_0119 PF00849 RNA pseudouridylate synthase BFO_0119 PF01479 S4 domain BFO_0120 PF00206 Lyase BFO_0120 PF08328 Adenylosuccinate lyase C-terminal BFO_0121 PF12833 Helix-turn-helix domain BFO_0123 PF00593 TonB dependent receptor BFO_0123 PF07715 TonB-dependent Receptor Plug Domain BFO_0123 PF13715 BFO_0123 BFO_0124 PF00005 ABC transporter BFO_0124 PF00664 ABC transporter transmembrane region BFO_0125 PF00005 ABC transporter BFO_0125 PF00664 ABC transporter transmembrane region BFO_0127 PF03605 BFO_0127 BFO_0128 PF08546 Ketopantoate reductase PanE/ApbA C terminal BFO_0129 PF00117 Glutamine amidotransferase class-I BFO_0130 PF00425 chorismate binding enzyme BFO_0131 PF01063 Aminotransferase class IV BFO_0133 PF01228 Glycine radical BFO_0133 PF02901 Pyruvate formate lyase BFO_0135 PF07690 Major Facilitator Superfamily BFO_0136 PF04055 Radical SAM superfamily BFO_0136 PF13353 4Fe-4S single cluster domain BFO_0137 PF00849 RNA pseudouridylate synthase BFO_0137 PF01479 S4 domain BFO_0138 PF00166 Chaperonin 10 Kd subunit BFO_0141 PF04170 NlpE N-terminal domain BFO_0143 PF01741 Large-conductance mechanosensitive channel, MscL BFO_0144 PF00293 NUDIX domain BFO_0144 PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal BFO_0145 PF06965 Na+/H+ antiporter 1 BFO_0146 PF00072 Response regulator receiver domain BFO_0146 PF04397 LytTr DNA-binding domain BFO_0147 PF06580 BFO_0147 BFO_0149 PF02687 BFO_0149 BFO_0149 PF12704 MacB-like periplasmic core domain BFO_0151 PF02687 BFO_0151 BFO_0151 PF12704 MacB-like periplasmic core domain BFO_0152 PF00005 ABC transporter BFO_0153 PF02687 BFO_0153 BFO_0153 PF12704 MacB-like periplasmic core domain BFO_0156 PF13437 HlyD family secretion protein BFO_0156 PF13533 Biotin-lipoyl like BFO_0158 PF02321 Outer membrane efflux protein BFO_0159 PF04326 Divergent AAA domain BFO_0160 PF00072 Response regulator receiver domain BFO_0160 PF00158 Sigma-54 interaction domain BFO_0160 PF02954 Bacterial regulatory protein, Fis family BFO_0161 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BFO_0162 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BFO_0165 PF09912 BFO_0165 BFO_0166 PF13715 BFO_0166 BFO_0166 PF14905 Outer membrane protein beta-barrel family BFO_0168 PF13601 Winged helix DNA-binding domain BFO_0169 PF03065 Glycosyl hydrolase family 57 BFO_0170 PF00534 Glycosyl transferases group 1 BFO_0170 PF13439 Glycosyltransferase Family 4 BFO_0171 PF06202 Amylo-alpha-1,6-glucosidase BFO_0171 PF12439 BFO_0171 BFO_0175 PF00501 AMP-binding enzyme BFO_0175 PF13193 AMP-binding enzyme C-terminal domain BFO_0176 PF07883 Cupin domain BFO_0176 PF13560 Helix-turn-helix domain BFO_0179 PF01121 Dephospho-CoA kinase BFO_0180 PF07949 YbbR-like protein BFO_0181 PF02699 Preprotein translocase subunit BFO_0182 PF01029 NusB family BFO_0184 PF00710 Asparaginase BFO_0185 PF02517 CAAX protease self-immunity BFO_0186 PF00722 Glycosyl hydrolases family 16 BFO_0187 PF12771 Starch-binding associating with outer membrane BFO_0188 PF07660 Secretin and TonB N terminus short domain BFO_0188 PF07715 TonB-dependent Receptor Plug Domain BFO_0188 PF13715 BFO_0188 BFO_0189 PF04773 FecR protein BFO_0189 PF16344 BFO_0189 BFO_0190 PF04542 Sigma-70 region 2 BFO_0190 PF08281 Sigma-70, region 4 BFO_0192 PF12705 PD-(D/E)XK nuclease superfamily BFO_0193 PF00266 Aminotransferase class-V BFO_0194 PF05635 23S rRNA-intervening sequence protein BFO_0195 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BFO_0195 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BFO_0196 PF06245 BFO_0196 BFO_0197 PF13419 Haloacid dehalogenase-like hydrolase BFO_0199 PF04542 Sigma-70 region 2 BFO_0206 PF03787 RAMP superfamily BFO_0208 PF03787 RAMP superfamily BFO_0211 PF00533 BRCA1 C Terminus (BRCT) domain BFO_0211 PF01653 NAD-dependent DNA ligase adenylation domain BFO_0211 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BFO_0211 PF03120 NAD-dependent DNA ligase OB-fold domain BFO_0211 PF12826 Helix-hairpin-helix motif BFO_0213 PF00701 Dihydrodipicolinate synthetase family BFO_0214 PF00596 Class II Aldolase and Adducin N-terminal domain BFO_0215 PF06379 BFO_0215 BFO_0216 PF06134 L-rhamnose isomerase (RhaA) BFO_0217 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BFO_0217 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BFO_0218 PF04542 Sigma-70 region 2 BFO_0218 PF08281 Sigma-70, region 4 BFO_0219 PF11325 BFO_0219 BFO_0220 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BFO_0220 PF03129 Anticodon binding domain BFO_0220 PF09180 Prolyl-tRNA synthetase, C-terminal BFO_0221 PF02548 Ketopantoate hydroxymethyltransferase BFO_0222 PF03572 Peptidase family S41 BFO_0222 PF14684 Tricorn protease C1 domain BFO_0224 PF04011 LemA family BFO_0225 PF01435 Peptidase family M48 BFO_0226 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BFO_0227 PF00162 Phosphoglycerate kinase BFO_0228 PF01554 MatE BFO_0229 PF00677 Lumazine binding domain BFO_0230 PF00365 Phosphofructokinase BFO_0232 PF03965 Penicillinase repressor BFO_0233 PF03544 Gram-negative bacterial TonB protein C-terminal BFO_0233 PF05569 BlaR1 peptidase M56 BFO_0237 PF00226 DnaJ domain BFO_0237 PF00684 DnaJ central domain BFO_0237 PF01556 DnaJ C terminal domain BFO_0238 PF01025 GrpE BFO_0239 PF00595 PDZ domain (Also known as DHR or GLGF) BFO_0239 PF13590 Domain of unknown function (DUF4136) BFO_0240 PF00488 MutS domain V BFO_0240 PF01713 Smr domain BFO_0241 PF12760 Transposase zinc-ribbon domain BFO_0241 PF12762 BFO_0241 BFO_0242 PF01180 Dihydroorotate dehydrogenase BFO_0243 PF01168 Alanine racemase, N-terminal domain BFO_0244 PF14902 BFO_0244 BFO_0245 PF13302 Acetyltransferase (GNAT) domain BFO_0251 PF00270 DEAD/DEAH box helicase BFO_0251 PF00271 Helicase conserved C-terminal domain BFO_0251 PF02559 CarD-like/TRCF domain BFO_0251 PF03461 TRCF domain BFO_0252 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BFO_0252 PF02770 Acyl-CoA dehydrogenase, middle domain BFO_0252 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BFO_0252 PF12186 Acyl-CoA dehydrogenase C terminal BFO_0253 PF00766 Electron transfer flavoprotein FAD-binding domain BFO_0253 PF01012 Electron transfer flavoprotein domain BFO_0254 PF01012 Electron transfer flavoprotein domain BFO_0256 PF00793 DAHP synthetase I family BFO_0257 PF01715 IPP transferase BFO_0261 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BFO_0261 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BFO_0266 PF06325 Ribosomal protein L11 methyltransferase (PrmA) BFO_0269 PF00072 Response regulator receiver domain BFO_0269 PF00196 Bacterial regulatory proteins, luxR family BFO_0270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BFO_0270 PF07730 Histidine kinase BFO_0270 PF13424 Tetratricopeptide repeat BFO_0271 PF13173 AAA domain BFO_0271 PF13635 BFO_0271 BFO_0272 PF06250 BFO_0272 BFO_0273 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) BFO_0277 PF05656 BFO_0277 BFO_0279 PF13568 Outer membrane protein beta-barrel domain BFO_0282 PF01936 NYN domain BFO_0284 PF16363 BFO_0284 BFO_0285 PF14128 BFO_0285 BFO_0286 PF00471 Ribosomal protein L33 BFO_0287 PF00830 Ribosomal L28 family BFO_0291 PF13472 GDSL-like Lipase/Acylhydrolase family BFO_0293 PF04073 Aminoacyl-tRNA editing domain BFO_0294 PF01048 Phosphorylase superfamily BFO_0296 PF13424 Tetratricopeptide repeat BFO_0298 PF00593 TonB dependent receptor BFO_0298 PF07715 TonB-dependent Receptor Plug Domain BFO_0298 PF13715 BFO_0298 BFO_0299 PF07980 SusD family BFO_0299 PF14322 Starch-binding associating with outer membrane BFO_0300 PF00703 Glycosyl hydrolases family 2 BFO_0300 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BFO_0300 PF02837 Glycosyl hydrolases family 2, sugar binding domain BFO_0300 PF02929 Beta galactosidase small chain BFO_0300 PF16353 BFO_0300 BFO_0301 PF03956 BFO_0301 BFO_0302 PF03956 BFO_0302 BFO_0303 PF12706 Beta-lactamase superfamily domain BFO_0304 PF06803 BFO_0304 BFO_0306 PF02952 L-fucose isomerase, C-terminal domain BFO_0306 PF07881 L-fucose isomerase, first N-terminal domain BFO_0306 PF07882 L-fucose isomerase, second N-terminal domain BFO_0307 PF07690 Major Facilitator Superfamily BFO_0308 PF01467 Cytidylyltransferase BFO_0309 PF00483 Nucleotidyl transferase BFO_0311 PF00691 OmpA family BFO_0312 PF01578 BFO_0312 BFO_0312 PF05140 BFO_0312 BFO_0313 PF00326 Prolyl oligopeptidase family BFO_0315 PF07971 Glycosyl hydrolase family 92 BFO_0317 PF01554 MatE BFO_0318 PF02261 Aspartate decarboxylase BFO_0319 PF02569 Pantoate-beta-alanine ligase BFO_0320 PF08323 Starch synthase catalytic domain BFO_0321 PF14092 BFO_0321 BFO_0324 PF03167 Uracil DNA glycosylase superfamily BFO_0325 PF13912 C2H2-type zinc finger BFO_0328 PF02661 Fic/DOC family BFO_0329 PF13280 BFO_0329 BFO_0330 PF09594 BFO_0330 BFO_0331 PF01522 Polysaccharide deacetylase BFO_0331 PF11959 BFO_0331 BFO_0332 PF03965 Penicillinase repressor BFO_0333 PF03544 Gram-negative bacterial TonB protein C-terminal BFO_0333 PF05569 BlaR1 peptidase M56 BFO_0333 PF13715 BFO_0333 BFO_0336 PF00132 Bacterial transferase hexapeptide (six repeats) BFO_0337 PF00291 Pyridoxal-phosphate dependent enzyme BFO_0339 PF13970 Domain of unknown function (DUF4221) BFO_0340 PF17170 BFO_0340 BFO_0341 PF15869 BFO_0341 BFO_0344 PF14055 BFO_0344 BFO_0345 PF17170 BFO_0345 BFO_0346 PF07610 BFO_0346 BFO_0347 PF00717 Peptidase S24-like BFO_0347 PF10502 Signal peptidase, peptidase S26 BFO_0349 PF17170 BFO_0349 BFO_0355 PF12760 Transposase zinc-ribbon domain BFO_0355 PF12762 BFO_0355 BFO_0356 PF17170 BFO_0356 BFO_0357 PF04932 BFO_0357 BFO_0363 PF17170 BFO_0363 BFO_0365 PF15869 BFO_0365 BFO_0367 PF14055 BFO_0367 BFO_0369 PF12760 Transposase zinc-ribbon domain BFO_0369 PF12762 BFO_0369 BFO_0371 PF17170 BFO_0371 BFO_0372 PF07610 BFO_0372 BFO_0373 PF04932 BFO_0373 BFO_0374 PF00717 Peptidase S24-like BFO_0374 PF10502 Signal peptidase, peptidase S26 BFO_0375 PF15869 BFO_0375 BFO_0376 PF00535 Glycosyl transferase family 2 BFO_0377 PF10459 Peptidase S46 BFO_0378 PF04087 BFO_0378 BFO_0380 PF05491 Holliday junction DNA helicase ruvB C-terminus BFO_0380 PF05496 Holliday junction DNA helicase ruvB N-terminus BFO_0382 PF16576 BFO_0382 BFO_0383 PF17170 BFO_0383 BFO_0385 PF01797 Transposase IS200 like BFO_0387 PF00873 AcrB/AcrD/AcrF family BFO_0388 PF02321 Outer membrane efflux protein BFO_0389 PF00873 AcrB/AcrD/AcrF family BFO_0392 PF03458 BFO_0392 BFO_0394 PF00593 TonB dependent receptor BFO_0394 PF07715 TonB-dependent Receptor Plug Domain BFO_0394 PF13715 BFO_0394 BFO_0395 PF07980 SusD family BFO_0395 PF14322 Starch-binding associating with outer membrane BFO_0396 PF09424 Yqey-like protein BFO_0397 PF00091 Tubulin/FtsZ family, GTPase domain BFO_0397 PF12327 FtsZ family, C-terminal domain BFO_0398 PF02491 SHS2 domain inserted in FTSA BFO_0398 PF14450 Cell division protein FtsA BFO_0400 PF01225 Mur ligase family, catalytic domain BFO_0400 PF02875 Mur ligase family, glutamate ligase domain BFO_0400 PF08245 Mur ligase middle domain BFO_0402 PF01098 BFO_0402 BFO_0403 PF02875 Mur ligase family, glutamate ligase domain BFO_0403 PF08245 Mur ligase middle domain BFO_0404 PF00953 Glycosyl transferase family 4 BFO_0404 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BFO_0405 PF01225 Mur ligase family, catalytic domain BFO_0405 PF02875 Mur ligase family, glutamate ligase domain BFO_0405 PF08245 Mur ligase middle domain BFO_0406 PF00905 Penicillin binding protein transpeptidase domain BFO_0406 PF03717 Penicillin-binding Protein dimerisation domain BFO_0406 PF03793 PASTA domain BFO_0408 PF01795 MraW methylase family BFO_0409 PF01553 Acyltransferase BFO_0410 PF13444 Acetyltransferase (GNAT) domain BFO_0411 PF02502 Ribose/Galactose Isomerase BFO_0412 PF00456 Transketolase, thiamine diphosphate binding domain BFO_0412 PF02779 Transketolase, pyrimidine binding domain BFO_0413 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BFO_0413 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BFO_0414 PF13419 Haloacid dehalogenase-like hydrolase BFO_0418 PF07715 TonB-dependent Receptor Plug Domain BFO_0419 PF14054 BFO_0419 BFO_0423 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BFO_0424 PF04542 Sigma-70 region 2 BFO_0424 PF08281 Sigma-70, region 4 BFO_0426 PF00834 Ribulose-phosphate 3 epimerase family BFO_0427 PF03772 BFO_0427 BFO_0428 PF00140 Sigma-70 factor, region 1 BFO_0428 PF04539 Sigma-70 region 3 BFO_0428 PF04542 Sigma-70 region 2 BFO_0428 PF04545 Sigma-70, region 4 BFO_0430 PF13180 PDZ domain BFO_0430 PF13365 Trypsin-like peptidase domain BFO_0431 PF12969 Domain of Unknown Function with PDB structure (DUF3857) BFO_0431 PF12970 Domain of Unknown Function with PDB structure (DUF3858) BFO_0432 PF01841 Transglutaminase-like superfamily BFO_0432 PF12969 Domain of Unknown Function with PDB structure (DUF3857) BFO_0433 PF01261 Xylose isomerase-like TIM barrel BFO_0437 PF00117 Glutamine amidotransferase class-I BFO_0437 PF00958 GMP synthase C terminal domain BFO_0437 PF02540 NAD synthase BFO_0438 PF02588 BFO_0438 BFO_0438 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BFO_0440 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) BFO_0441 PF01435 Peptidase family M48 BFO_0442 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BFO_0442 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BFO_0443 PF01554 MatE BFO_0444 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BFO_0444 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BFO_0445 PF04074 Domain of unknown function (DUF386) BFO_0446 PF01523 Putative modulator of DNA gyrase BFO_0448 PF01523 Putative modulator of DNA gyrase BFO_0449 PF11810 BFO_0449 BFO_0450 PF00703 Glycosyl hydrolases family 2 BFO_0450 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BFO_0450 PF02837 Glycosyl hydrolases family 2, sugar binding domain BFO_0450 PF02929 Beta galactosidase small chain BFO_0450 PF16353 BFO_0450 BFO_0451 PF00919 Uncharacterized protein family UPF0004 BFO_0451 PF01938 TRAM domain BFO_0451 PF04055 Radical SAM superfamily BFO_0452 PF00149 Calcineurin-like phosphoesterase BFO_0452 PF07691 PA14 domain BFO_0453 PF03372 Endonuclease/Exonuclease/phosphatase family BFO_0454 PF01643 Acyl-ACP thioesterase BFO_0457 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BFO_0458 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BFO_0458 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BFO_0459 PF02321 Outer membrane efflux protein BFO_0461 PF16576 BFO_0461 BFO_0462 PF02687 BFO_0462 BFO_0462 PF12704 MacB-like periplasmic core domain BFO_0463 PF02687 BFO_0463 BFO_0463 PF12704 MacB-like periplasmic core domain BFO_0464 PF00005 ABC transporter BFO_0466 PF00128 Alpha amylase, catalytic domain BFO_0466 PF09087 Cyclomaltodextrinase, N-terminal BFO_0466 PF10438 Cyclo-malto-dextrinase C-terminal domain BFO_0467 PF00852 Glycosyltransferase family 10 (fucosyltransferase) BFO_0468 PF00905 Penicillin binding protein transpeptidase domain BFO_0468 PF00912 Transglycosylase BFO_0468 PF06832 BFO_0468 BFO_0469 PF00207 Alpha-2-macroglobulin family BFO_0469 PF01835 MG2 domain BFO_0469 PF07703 Alpha-2-macroglobulin family N-terminal region BFO_0469 PF11974 Alpha-2-macroglobulin MG1 domain BFO_0471 PF00156 Phosphoribosyl transferase domain BFO_0473 PF00206 Lyase BFO_0475 PF00534 Glycosyl transferases group 1 BFO_0475 PF13439 Glycosyltransferase Family 4 BFO_0476 PF00075 RNase H BFO_0476 PF01693 Caulimovirus viroplasmin BFO_0478 PF00578 AhpC/TSA family BFO_0478 PF14289 BFO_0478 BFO_0479 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BFO_0481 PF00579 tRNA synthetases class I (W and Y) BFO_0482 PF01926 50S ribosome-binding GTPase BFO_0482 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BFO_0484 PF01926 50S ribosome-binding GTPase BFO_0484 PF07650 KH domain BFO_0485 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BFO_0485 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BFO_0486 PF01783 Ribosomal L32p protein family BFO_0487 PF02620 BFO_0487 BFO_0489 PF07971 Glycosyl hydrolase family 92 BFO_0490 PF00295 Glycosyl hydrolases family 28 BFO_0491 PF17132 BFO_0491 BFO_0492 PF17132 BFO_0492 BFO_0493 PF07980 SusD family BFO_0493 PF14322 Starch-binding associating with outer membrane BFO_0495 PF07715 TonB-dependent Receptor Plug Domain BFO_0495 PF13715 BFO_0495 BFO_0496 PF04773 FecR protein BFO_0496 PF16344 BFO_0496 BFO_0497 PF00326 Prolyl oligopeptidase family BFO_0497 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BFO_0498 PF07980 SusD family BFO_0498 PF14322 Starch-binding associating with outer membrane BFO_0499 PF00593 TonB dependent receptor BFO_0499 PF07715 TonB-dependent Receptor Plug Domain BFO_0499 PF13715 BFO_0499 BFO_0505 PF00578 AhpC/TSA family BFO_0507 PF00923 Transaldolase BFO_0508 PF01926 50S ribosome-binding GTPase BFO_0512 PF00579 tRNA synthetases class I (W and Y) BFO_0513 PF03992 Antibiotic biosynthesis monooxygenase BFO_0515 PF00056 lactate/malate dehydrogenase, NAD binding domain BFO_0515 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BFO_0517 PF02779 Transketolase, pyrimidine binding domain BFO_0517 PF02780 Transketolase, C-terminal domain BFO_0517 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BFO_0518 PF02080 TrkA-C domain BFO_0518 PF02254 TrkA-N domain BFO_0519 PF02386 Cation transport protein BFO_0520 PF15418 BFO_0520 BFO_0521 PF00593 TonB dependent receptor BFO_0521 PF07715 TonB-dependent Receptor Plug Domain BFO_0523 PF03734 L,D-transpeptidase catalytic domain BFO_0525 PF01637 Archaeal ATPase BFO_0525 PF03008 BFO_0525 BFO_0527 PF01609 Transposase DDE domain BFO_0527 PF05598 BFO_0527 BFO_0530 PF07804 HipA-like C-terminal domain BFO_0530 PF13657 HipA N-terminal domain BFO_0531 PF01381 Helix-turn-helix BFO_0532 PF13657 HipA N-terminal domain BFO_0533 PF07804 HipA-like C-terminal domain BFO_0534 PF01926 50S ribosome-binding GTPase BFO_0534 PF10396 GTP-binding protein TrmE N-terminus BFO_0534 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE BFO_0535 PF07313 Protein of unknown function (DUF1460) BFO_0536 PF00271 Helicase conserved C-terminal domain BFO_0536 PF02151 UvrB/uvrC motif BFO_0536 PF04851 Type III restriction enzyme, res subunit BFO_0536 PF12344 Ultra-violet resistance protein B BFO_0539 PF03932 CutC family BFO_0540 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BFO_0540 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BFO_0540 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BFO_0544 PF13439 Glycosyltransferase Family 4 BFO_0544 PF13692 Glycosyl transferases group 1 BFO_0545 PF04055 Radical SAM superfamily BFO_0545 PF13186 Iron-sulfur cluster-binding domain BFO_0547 PF00534 Glycosyl transferases group 1 BFO_0547 PF13439 Glycosyltransferase Family 4 BFO_0548 PF04991 BFO_0548 BFO_0549 PF01943 BFO_0549 BFO_0549 PF14667 Polysaccharide biosynthesis C-terminal domain BFO_0550 PF03009 Glycerophosphoryl diester phosphodiesterase family BFO_0552 PF02563 Polysaccharide biosynthesis/export protein BFO_0552 PF10531 SLBB domain BFO_0553 PF00137 ATP synthase subunit C BFO_0554 PF01496 V-type ATPase 116kDa subunit family BFO_0555 PF01813 ATP synthase subunit D BFO_0556 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BFO_0556 PF02874 ATP synthase alpha/beta family, beta-barrel domain BFO_0557 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BFO_0557 PF02874 ATP synthase alpha/beta family, beta-barrel domain BFO_0557 PF16886 BFO_0557 BFO_0558 PF10962 BFO_0558 BFO_0561 PF07494 Two component regulator propeller BFO_0561 PF07495 Y_Y_Y domain BFO_0561 PF07730 Histidine kinase BFO_0562 PF00072 Response regulator receiver domain BFO_0562 PF00196 Bacterial regulatory proteins, luxR family BFO_0567 PF01541 GIY-YIG catalytic domain BFO_0571 PF13620 Carboxypeptidase regulatory-like domain BFO_0574 PF02368 Bacterial Ig-like domain (group 2) BFO_0574 PF13306 Leucine rich repeats (6 copies) BFO_0575 PF02368 Bacterial Ig-like domain (group 2) BFO_0575 PF13306 Leucine rich repeats (6 copies) BFO_0578 PF13421 BFO_0578 BFO_0580 PF01026 TatD related DNase BFO_0581 PF01809 BFO_0581 BFO_0582 PF00825 Ribonuclease P BFO_0583 PF02602 Uroporphyrinogen-III synthase HemD BFO_0584 PF14093 BFO_0584 BFO_0585 PF00890 FAD binding domain BFO_0585 PF02910 Fumarate reductase flavoprotein C-term BFO_0586 PF04542 Sigma-70 region 2 BFO_0586 PF08281 Sigma-70, region 4 BFO_0587 PF04773 FecR protein BFO_0587 PF16344 BFO_0587 BFO_0588 PF00593 TonB dependent receptor BFO_0588 PF07660 Secretin and TonB N terminus short domain BFO_0588 PF07715 TonB-dependent Receptor Plug Domain BFO_0588 PF13715 BFO_0588 BFO_0589 PF07980 SusD family BFO_0589 PF14322 Starch-binding associating with outer membrane BFO_0590 PF13320 BFO_0590 BFO_0593 PF00916 BFO_0593 BFO_0593 PF01740 STAS domain BFO_0594 PF00472 RF-1 domain BFO_0594 PF03462 PCRF domain BFO_0595 PF13528 Glycosyl transferase family 1 BFO_0597 PF07804 HipA-like C-terminal domain BFO_0597 PF13657 HipA N-terminal domain BFO_0602 PF00885 6,7-dimethyl-8-ribityllumazine synthase BFO_0603 PF13174 Tetratricopeptide repeat BFO_0603 PF13181 Tetratricopeptide repeat BFO_0604 PF02463 RecF/RecN/SMC N terminal domain BFO_0605 PF05258 BFO_0605 BFO_0606 PF01812 5-formyltetrahydrofolate cyclo-ligase family BFO_0607 PF03572 Peptidase family S41 BFO_0607 PF13180 PDZ domain BFO_0608 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BFO_0609 PF01467 Cytidylyltransferase BFO_0610 PF00625 Guanylate kinase BFO_0611 PF03755 BFO_0611 BFO_0611 PF08340 BFO_0611 BFO_0614 PF03432 BFO_0614 BFO_0616 PF11888 BFO_0616 BFO_0617 PF01807 CHC2 zinc finger BFO_0617 PF13155 Toprim-like BFO_0618 PF05272 BFO_0618 BFO_0621 PF12728 Helix-turn-helix domain BFO_0622 PF12728 Helix-turn-helix domain BFO_0623 PF03852 DNA mismatch endonuclease Vsr BFO_0625 PF10592 BFO_0625 BFO_0626 PF14390 BFO_0626 BFO_0627 PF10593 BFO_0627 BFO_0628 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BFO_0631 PF00145 C-5 cytosine-specific DNA methylase BFO_0634 PF00589 Phage integrase family BFO_0634 PF13102 Phage integrase SAM-like domain BFO_0634 PF17293 BFO_0634 BFO_0635 PF00589 Phage integrase family BFO_0635 PF13102 Phage integrase SAM-like domain BFO_0635 PF17293 BFO_0635 BFO_0642 PF00501 AMP-binding enzyme BFO_0643 PF00919 Uncharacterized protein family UPF0004 BFO_0643 PF04055 Radical SAM superfamily BFO_0644 PF03279 BFO_0644 BFO_0645 PF00535 Glycosyl transferase family 2 BFO_0649 PF04024 BFO_0649 BFO_0650 PF03551 Transcriptional regulator PadR-like family BFO_0651 PF00950 BFO_0651 BFO_0652 PF02021 Uncharacterised protein family UPF0102 BFO_0653 PF04237 YjbR BFO_0654 PF03099 Biotin/lipoate A/B protein ligase family BFO_0655 PF02837 Glycosyl hydrolases family 2, sugar binding domain BFO_0655 PF17132 BFO_0655 BFO_0656 PF00231 ATP synthase BFO_0657 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BFO_0657 PF00306 ATP synthase alpha/beta chain, C terminal domain BFO_0657 PF02874 ATP synthase alpha/beta family, beta-barrel domain BFO_0658 PF00213 ATP synthase delta (OSCP) subunit BFO_0659 PF00430 ATP synthase B/B' CF(0) BFO_0660 PF00137 ATP synthase subunit C BFO_0661 PF00119 ATP synthase A chain BFO_0663 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BFO_0664 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BFO_0664 PF02874 ATP synthase alpha/beta family, beta-barrel domain BFO_0665 PF03572 Peptidase family S41 BFO_0666 PF10988 Protein of unknown function (DUF2807) BFO_0667 PF00009 Elongation factor Tu GTP binding domain BFO_0667 PF16658 BFO_0667 BFO_0668 PF04321 RmlD substrate binding domain BFO_0669 PF16271 BFO_0669 BFO_0670 PF00753 Metallo-beta-lactamase superfamily BFO_0671 PF00675 Insulinase (Peptidase family M16) BFO_0671 PF05193 Peptidase M16 inactive domain BFO_0673 PF03062 BFO_0673 BFO_0674 PF00657 GDSL-like Lipase/Acylhydrolase BFO_0676 PF06824 Protein of unknown function (DUF1237) BFO_0677 PF00012 Hsp70 protein BFO_0678 PF12728 Helix-turn-helix domain BFO_0679 PF00589 Phage integrase family BFO_0679 PF13102 Phage integrase SAM-like domain BFO_0679 PF17293 BFO_0679 BFO_0681 PF13847 Methyltransferase domain BFO_0683 PF12728 Helix-turn-helix domain BFO_0684 PF05272 BFO_0684 BFO_0685 PF01807 CHC2 zinc finger BFO_0685 PF13155 Toprim-like BFO_0687 PF05713 BFO_0687 BFO_0688 PF03432 BFO_0688 BFO_0690 PF01381 Helix-turn-helix BFO_0694 PF01048 Phosphorylase superfamily BFO_0696 PF10604 Polyketide cyclase / dehydrase and lipid transport BFO_0699 PF00933 Glycosyl hydrolase family 3 N terminal domain BFO_0699 PF01915 Glycosyl hydrolase family 3 C-terminal domain BFO_0699 PF14310 Fibronectin type III-like domain BFO_0701 PF13088 BNR repeat-like domain BFO_0703 PF01447 Thermolysin metallopeptidase, catalytic domain BFO_0703 PF02868 Thermolysin metallopeptidase, alpha-helical domain BFO_0703 PF07504 Fungalysin/Thermolysin Propeptide Motif BFO_0705 PF00488 MutS domain V BFO_0705 PF01624 MutS domain I BFO_0705 PF05188 MutS domain II BFO_0705 PF05190 MutS family domain IV BFO_0705 PF05192 MutS domain III BFO_0706 PF08450 SMP-30/Gluconolaconase/LRE-like region BFO_0707 PF00575 S1 RNA binding domain BFO_0707 PF00773 RNB domain BFO_0707 PF08206 Ribonuclease B OB domain BFO_0708 PF11307 BFO_0708 BFO_0709 PF01676 Metalloenzyme superfamily BFO_0709 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BFO_0711 PF05592 Bacterial alpha-L-rhamnosidase BFO_0711 PF08531 Alpha-L-rhamnosidase N-terminal domain BFO_0711 PF17389 BFO_0711 BFO_0711 PF17390 BFO_0711 BFO_0712 PF00881 Nitroreductase family BFO_0716 PF00005 ABC transporter BFO_0717 PF00696 Amino acid kinase family BFO_0718 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BFO_0718 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BFO_0719 PF05036 Sporulation related domain BFO_0721 PF06439 Domain of Unknown Function (DUF1080) BFO_0722 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BFO_0723 PF00593 TonB dependent receptor BFO_0723 PF07715 TonB-dependent Receptor Plug Domain BFO_0723 PF13715 BFO_0723 BFO_0724 PF07980 SusD family BFO_0724 PF14322 Starch-binding associating with outer membrane BFO_0725 PF00884 Sulfatase BFO_0725 PF16385 BFO_0725 BFO_0726 PF16585 BFO_0726 BFO_0728 PF17517 BFO_0728 BFO_0729 PF13174 Tetratricopeptide repeat BFO_0731 PF00501 AMP-binding enzyme BFO_0731 PF14535 AMP-binding enzyme C-terminal domain BFO_0733 PF00221 Aromatic amino acid lyase BFO_0735 PF02624 YcaO-like family BFO_0736 PF07715 TonB-dependent Receptor Plug Domain BFO_0736 PF14905 Outer membrane protein beta-barrel family BFO_0738 PF00196 Bacterial regulatory proteins, luxR family BFO_0740 PF00521 DNA gyrase/topoisomerase IV, subunit A BFO_0741 PF11777 BFO_0741 BFO_0742 PF03572 Peptidase family S41 BFO_0742 PF14684 Tricorn protease C1 domain BFO_0744 PF13614 AAA domain BFO_0745 PF02195 ParB-like nuclease domain BFO_0747 PF01464 Transglycosylase SLT domain BFO_0747 PF01476 LysM domain BFO_0748 PF02824 TGS domain BFO_0748 PF04607 Region found in RelA / SpoT proteins BFO_0748 PF13291 ACT domain BFO_0748 PF13328 HD domain BFO_0752 PF01699 Sodium/calcium exchanger protein BFO_0753 PF13411 MerR HTH family regulatory protein BFO_0754 PF01551 Peptidase family M23 BFO_0755 PF01411 tRNA synthetases class II (A) BFO_0755 PF02272 DHHA1 domain BFO_0755 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BFO_0757 PF01761 3-dehydroquinate synthase BFO_0758 PF13701 BFO_0758 BFO_0760 PF01790 BFO_0760 BFO_0762 PF00884 Sulfatase BFO_0762 PF16347 BFO_0762 BFO_0765 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BFO_0766 PF01175 Urocanase BFO_0766 PF17391 BFO_0766 BFO_0766 PF17392 BFO_0766 BFO_0769 PF08487 BFO_0769 BFO_0769 PF09906 BFO_0769 BFO_0770 PF02971 Formiminotransferase domain BFO_0770 PF07837 Formiminotransferase domain, N-terminal subdomain BFO_0771 PF01979 Amidohydrolase family BFO_0772 PF05635 23S rRNA-intervening sequence protein BFO_0773 PF04961 Formiminotransferase-cyclodeaminase BFO_0774 PF00221 Aromatic amino acid lyase BFO_0776 PF09697 BFO_0776 BFO_0778 PF13509 S1 domain BFO_0781 PF01569 PAP2 superfamily BFO_0782 PF07396 Phosphate-selective porin O and P BFO_0783 PF00328 Histidine phosphatase superfamily (branch 2) BFO_0784 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BFO_0786 PF00005 ABC transporter BFO_0787 PF00209 Sodium:neurotransmitter symporter family BFO_0788 PF01263 Aldose 1-epimerase BFO_0790 PF02445 Quinolinate synthetase A protein BFO_0791 PF07495 Y_Y_Y domain BFO_0792 PF13176 Tetratricopeptide repeat BFO_0793 PF09365 BFO_0793 BFO_0798 PF13279 Thioesterase-like superfamily BFO_0799 PF02481 DNA recombination-mediator protein A BFO_0799 PF14520 Helix-hairpin-helix domain BFO_0800 PF00884 Sulfatase BFO_0802 PF00291 Pyridoxal-phosphate dependent enzyme BFO_0803 PF01625 Peptide methionine sulfoxide reductase BFO_0803 PF01641 SelR domain BFO_0804 PF04055 Radical SAM superfamily BFO_0804 PF12836 Helix-hairpin-helix motif BFO_0805 PF13566 BFO_0805 BFO_0807 PF14903 BFO_0807 BFO_0809 PF00005 ABC transporter BFO_0809 PF00873 AcrB/AcrD/AcrF family BFO_0810 PF00873 AcrB/AcrD/AcrF family BFO_0811 PF16576 BFO_0811 BFO_0812 PF02321 Outer membrane efflux protein BFO_0814 PF00005 ABC transporter BFO_0815 PF01238 Phosphomannose isomerase type I BFO_0816 PF00128 Alpha amylase, catalytic domain BFO_0816 PF02806 Alpha amylase, C-terminal all-beta domain BFO_0816 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BFO_0819 PF00682 HMGL-like BFO_0819 PF08502 LeuA allosteric (dimerisation) domain BFO_0820 PF00330 Aconitase family (aconitate hydratase) BFO_0821 PF13366 BFO_0821 BFO_0822 PF00694 Aconitase C-terminal domain BFO_0823 PF00682 HMGL-like BFO_0823 PF08502 LeuA allosteric (dimerisation) domain BFO_0824 PF00180 Isocitrate/isopropylmalate dehydrogenase BFO_0827 PF01103 Surface antigen BFO_0828 PF00588 SpoU rRNA Methylase family BFO_0830 PF14734 Domain of unknown function (DUF4469) with IG-like fold BFO_0831 PF01609 Transposase DDE domain BFO_0833 PF02368 Bacterial Ig-like domain (group 2) BFO_0833 PF13004 Bacteroidetes-Associated Carbohydrate-binding Often N-terminal BFO_0833 PF13306 Leucine rich repeats (6 copies) BFO_0836 PF15738 BFO_0836 BFO_0837 PF00999 Sodium/hydrogen exchanger family BFO_0838 PF00809 Pterin binding enzyme BFO_0838 PF02310 B12 binding domain BFO_0838 PF02574 Homocysteine S-methyltransferase BFO_0838 PF02607 B12 binding domain BFO_0838 PF02965 Vitamin B12 dependent methionine synthase, activation domain BFO_0839 PF01136 BFO_0839 BFO_0839 PF12392 BFO_0839 BFO_0840 PF04204 Homoserine O-succinyltransferase BFO_0841 PF00994 Probable molybdopterin binding domain BFO_0841 PF02464 Competence-damaged protein BFO_0842 PF00814 Glycoprotease family BFO_0843 PF04357 BFO_0843 BFO_0844 PF13568 Outer membrane protein beta-barrel domain BFO_0845 PF01613 Flavin reductase like domain BFO_0846 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain BFO_0846 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain BFO_0847 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BFO_0847 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BFO_0848 PF01694 Rhomboid family BFO_0853 PF04055 Radical SAM superfamily BFO_0853 PF13353 4Fe-4S single cluster domain BFO_0860 PF00005 ABC transporter BFO_0860 PF00664 ABC transporter transmembrane region BFO_0860 PF03412 Peptidase C39 family BFO_0861 PF13437 HlyD family secretion protein BFO_0862 PF05147 Lanthionine synthetase C-like protein BFO_0863 PF02709 N-terminal domain of galactosyltransferase BFO_0866 PF02687 BFO_0866 BFO_0866 PF12704 MacB-like periplasmic core domain BFO_0871 PF02709 N-terminal domain of galactosyltransferase BFO_0872 PF17170 BFO_0872 BFO_0875 PF03321 GH3 auxin-responsive promoter BFO_0877 PF04542 Sigma-70 region 2 BFO_0877 PF08281 Sigma-70, region 4 BFO_0886 PF13884 Chaperone of endosialidase BFO_0887 PF00326 Prolyl oligopeptidase family BFO_0888 PF04542 Sigma-70 region 2 BFO_0888 PF08281 Sigma-70, region 4 BFO_0889 PF04773 FecR protein BFO_0889 PF16344 BFO_0889 BFO_0890 PF00593 TonB dependent receptor BFO_0890 PF13715 BFO_0890 BFO_0892 PF09697 BFO_0892 BFO_0894 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BFO_0895 PF00072 Response regulator receiver domain BFO_0895 PF00486 Transcriptional regulatory protein, C terminal BFO_0899 PF14063 BFO_0899 BFO_0900 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BFO_0901 PF00300 Histidine phosphatase superfamily (branch 1) BFO_0902 PF02654 BFO_0902 BFO_0903 PF02277 Phosphoribosyltransferase BFO_0905 PF00440 Bacterial regulatory proteins, tetR family BFO_0906 PF00881 Nitroreductase family BFO_0907 PF02146 Sir2 family BFO_0908 PF13173 AAA domain BFO_0908 PF13635 BFO_0908 BFO_0913 PF12710 haloacid dehalogenase-like hydrolase BFO_0914 PF01040 UbiA prenyltransferase family BFO_0918 PF14060 BFO_0918 BFO_0919 PF04542 Sigma-70 region 2 BFO_0919 PF08281 Sigma-70, region 4 BFO_0921 PF14060 BFO_0921 BFO_0922 PF00072 Response regulator receiver domain BFO_0922 PF08665 BFO_0922 BFO_0923 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BFO_0924 PF02367 Uncharacterised P-loop hydrolase UPF0079 BFO_0925 PF01588 Putative tRNA binding domain BFO_0925 PF08264 Anticodon-binding domain of tRNA BFO_0925 PF09334 tRNA synthetases class I (M) BFO_0926 PF00270 DEAD/DEAH box helicase BFO_0926 PF00271 Helicase conserved C-terminal domain BFO_0926 PF03880 DbpA RNA binding domain BFO_0929 PF13310 BFO_0929 BFO_0934 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BFO_0936 PF01293 Phosphoenolpyruvate carboxykinase BFO_0937 PF08713 DNA alkylation repair enzyme BFO_0938 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BFO_0938 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BFO_0939 PF07670 Nucleoside recognition BFO_0941 PF02130 Uncharacterized protein family UPF0054 BFO_0942 PF00133 tRNA synthetases class I (I, L, M and V) BFO_0942 PF08264 Anticodon-binding domain of tRNA BFO_0942 PF13603 Leucyl-tRNA synthetase, Domain 2 BFO_0943 PF02588 BFO_0943 BFO_0943 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BFO_0944 PF01725 Ham1 family BFO_0946 PF13847 Methyltransferase domain BFO_0947 PF00501 AMP-binding enzyme BFO_0948 PF01810 BFO_0948 BFO_0949 PF02401 LytB protein BFO_0951 PF02224 Cytidylate kinase BFO_0953 PF03544 Gram-negative bacterial TonB protein C-terminal BFO_0954 PF00348 Polyprenyl synthetase BFO_0955 PF01026 TatD related DNase BFO_0957 PF01618 BFO_0957 BFO_0960 PF02472 Biopolymer transport protein ExbD/TolR BFO_0961 PF01037 AsnC family BFO_0961 PF13404 AsnC-type helix-turn-helix domain BFO_0962 PF03977 BFO_0962 BFO_0963 PF00364 Biotin-requiring enzyme BFO_0964 PF00932 Lamin Tail Domain BFO_0964 PF04277 BFO_0964 BFO_0965 PF01039 Carboxyl transferase domain BFO_0966 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BFO_0967 PF00696 Amino acid kinase family BFO_0968 PF08281 Sigma-70, region 4 BFO_0969 PF04773 FecR protein BFO_0969 PF16344 BFO_0969 BFO_0970 PF00593 TonB dependent receptor BFO_0970 PF07715 TonB-dependent Receptor Plug Domain BFO_0970 PF13715 BFO_0970 BFO_0971 PF07980 SusD family BFO_0971 PF14322 Starch-binding associating with outer membrane BFO_0972 PF16323 BFO_0972 BFO_0973 PF01238 Phosphomannose isomerase type I BFO_0974 PF00128 Alpha amylase, catalytic domain BFO_0974 PF02806 Alpha amylase, C-terminal all-beta domain BFO_0974 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BFO_0977 PF13306 Leucine rich repeats (6 copies) BFO_0981 PF00593 TonB dependent receptor BFO_0981 PF07660 Secretin and TonB N terminus short domain BFO_0981 PF07715 TonB-dependent Receptor Plug Domain BFO_0981 PF13715 BFO_0981 BFO_0982 PF07980 SusD family BFO_0982 PF14322 Starch-binding associating with outer membrane BFO_0983 PF13004 Bacteroidetes-Associated Carbohydrate-binding Often N-terminal BFO_0985 PF00403 Heavy-metal-associated domain BFO_0988 PF13380 CoA binding domain BFO_0988 PF13549 ATP-grasp domain BFO_0988 PF13607 Succinyl-CoA ligase like flavodoxin domain BFO_0989 PF00149 Calcineurin-like phosphoesterase BFO_0989 PF12320 Type 5 capsule protein repressor C-terminal domain BFO_0990 PF13476 AAA domain BFO_0990 PF13558 Putative exonuclease SbcCD, C subunit BFO_0991 PF00480 ROK family BFO_0992 PF03308 ArgK protein BFO_0993 PF07610 BFO_0993 BFO_0995 PF07610 BFO_0995 BFO_0996 PF00186 Dihydrofolate reductase BFO_0997 PF00303 Thymidylate synthase BFO_0999 PF00860 Permease family BFO_1000 PF14681 Uracil phosphoribosyltransferase BFO_1001 PF00476 DNA polymerase family A BFO_1001 PF01367 5'-3' exonuclease, C-terminal SAM fold BFO_1001 PF01612 3'-5' exonuclease BFO_1001 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BFO_1002 PF00348 Polyprenyl synthetase BFO_1003 PF04892 BFO_1003 BFO_1004 PF13701 BFO_1004 BFO_1005 PF11028 BFO_1005 BFO_1006 PF01522 Polysaccharide deacetylase BFO_1007 PF00326 Prolyl oligopeptidase family BFO_1007 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BFO_1008 PF01170 Putative RNA methylase family UPF0020 BFO_1008 PF02926 THUMP domain BFO_1010 PF14134 BFO_1010 BFO_1011 PF00877 NlpC/P60 family BFO_1011 PF08239 Bacterial SH3 domain BFO_1012 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BFO_1012 PF13378 Enolase C-terminal domain-like BFO_1014 PF12836 Helix-hairpin-helix motif BFO_1015 PF04055 Radical SAM superfamily BFO_1016 PF01894 Uncharacterised protein family UPF0047 BFO_1017 PF17170 BFO_1017 BFO_1018 PF14055 BFO_1018 BFO_1020 PF17170 BFO_1020 BFO_1021 PF14055 BFO_1021 BFO_1023 PF12741 Susd and RagB outer membrane lipoprotein BFO_1024 PF00593 TonB dependent receptor BFO_1024 PF07715 TonB-dependent Receptor Plug Domain BFO_1024 PF13715 BFO_1024 BFO_1025 PF12831 FAD dependent oxidoreductase BFO_1028 PF14488 Domain of unknown function (DUF4434) BFO_1028 PF17134 BFO_1028 BFO_1030 PF03477 ATP cone domain BFO_1030 PF13597 Anaerobic ribonucleoside-triphosphate reductase BFO_1032 PF01230 HIT domain BFO_1033 PF01272 Transcription elongation factor, GreA/GreB, C-term BFO_1033 PF03449 Transcription elongation factor, N-terminal BFO_1034 PF13905 Thioredoxin-like BFO_1034 PF14289 BFO_1034 BFO_1035 PF01380 SIS domain BFO_1036 PF00294 pfkB family carbohydrate kinase BFO_1037 PF00005 ABC transporter BFO_1038 PF01546 Peptidase family M20/M25/M40 BFO_1038 PF07687 Peptidase dimerisation domain BFO_1040 PF00013 KH domain BFO_1040 PF00575 S1 RNA binding domain BFO_1040 PF01138 3' exoribonuclease family, domain 1 BFO_1040 PF03725 3' exoribonuclease family, domain 2 BFO_1040 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BFO_1042 PF00535 Glycosyl transferase family 2 BFO_1043 PF00534 Glycosyl transferases group 1 BFO_1043 PF13439 Glycosyltransferase Family 4 BFO_1048 PF00132 Bacterial transferase hexapeptide (six repeats) BFO_1049 PF00534 Glycosyl transferases group 1 BFO_1050 PF02350 UDP-N-acetylglucosamine 2-epimerase BFO_1051 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BFO_1051 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BFO_1051 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BFO_1052 PF02661 Fic/DOC family BFO_1052 PF13784 Fic/DOC family N-terminal BFO_1055 PF04326 Divergent AAA domain BFO_1055 PF13412 Winged helix-turn-helix DNA-binding BFO_1055 PF13749 ATP-dependent DNA helicase recG C-terminal BFO_1056 PF00733 Asparagine synthase BFO_1056 PF13537 Glutamine amidotransferase domain BFO_1059 PF13489 Methyltransferase domain BFO_1061 PF08241 Methyltransferase domain BFO_1063 PF02348 Cytidylyltransferase BFO_1064 PF00483 Nucleotidyl transferase BFO_1065 PF02350 UDP-N-acetylglucosamine 2-epimerase BFO_1066 PF03102 NeuB family BFO_1066 PF08666 SAF domain BFO_1067 PF14602 Hexapeptide repeat of succinyl-transferase BFO_1068 PF01522 Polysaccharide deacetylase BFO_1070 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BFO_1070 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BFO_1071 PF13561 Enoyl-(Acyl carrier protein) reductase BFO_1072 PF00550 Phosphopantetheine attachment site BFO_1073 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BFO_1074 PF16363 BFO_1074 BFO_1075 PF13440 BFO_1075 BFO_1077 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BFO_1077 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BFO_1079 PF00403 Heavy-metal-associated domain BFO_1079 PF03773 BFO_1079 BFO_1080 PF03572 Peptidase family S41 BFO_1080 PF13180 PDZ domain BFO_1081 PF01467 Cytidylyltransferase BFO_1082 PF00204 DNA gyrase B BFO_1082 PF00986 DNA gyrase B subunit, carboxyl terminus BFO_1082 PF01751 Toprim domain BFO_1082 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BFO_1084 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family BFO_1086 PF01841 Transglutaminase-like superfamily BFO_1087 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family BFO_1088 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BFO_1089 PF00551 Formyl transferase BFO_1090 PF00550 Phosphopantetheine attachment site BFO_1091 PF00109 Beta-ketoacyl synthase, N-terminal domain BFO_1091 PF02801 Beta-ketoacyl synthase, C-terminal domain BFO_1092 PF00035 Double-stranded RNA binding motif BFO_1092 PF14622 Ribonuclease-III-like BFO_1093 PF04237 YjbR BFO_1095 PF00365 Phosphofructokinase BFO_1096 PF00149 Calcineurin-like phosphoesterase BFO_1096 PF02872 5'-nucleotidase, C-terminal domain BFO_1097 PF13620 Carboxypeptidase regulatory-like domain BFO_1099 PF01134 Glucose inhibited division protein A BFO_1099 PF13932 GidA associated domain 3 BFO_1100 PF01541 GIY-YIG catalytic domain BFO_1100 PF08459 UvrC Helix-hairpin-helix N-terminal BFO_1101 PF02580 D-Tyr-tRNA(Tyr) deacylase BFO_1109 PF12706 Beta-lactamase superfamily domain BFO_1110 PF01548 BFO_1110 BFO_1110 PF02371 BFO_1110 BFO_1112 PF00309 BFO_1112 BFO_1112 PF04552 Sigma-54, DNA binding domain BFO_1112 PF04963 Sigma-54 factor, core binding domain BFO_1113 PF01597 Glycine cleavage H-protein BFO_1114 PF00731 AIR carboxylase BFO_1115 PF04551 GcpE protein BFO_1118 PF13091 PLD-like domain BFO_1120 PF14114 BFO_1120 BFO_1121 PF02075 Crossover junction endodeoxyribonuclease RuvC BFO_1122 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BFO_1122 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BFO_1125 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BFO_1126 PF12895 Anaphase-promoting complex, cyclosome, subunit 3 BFO_1126 PF13174 Tetratricopeptide repeat BFO_1126 PF13181 Tetratricopeptide repeat BFO_1126 PF13432 Tetratricopeptide repeat BFO_1126 PF13525 Outer membrane lipoprotein BFO_1128 PF00515 Tetratricopeptide repeat BFO_1130 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BFO_1130 PF05221 S-adenosyl-L-homocysteine hydrolase BFO_1132 PF00109 Beta-ketoacyl synthase, N-terminal domain BFO_1132 PF02801 Beta-ketoacyl synthase, C-terminal domain BFO_1133 PF13723 BFO_1133 BFO_1134 PF00892 EamA-like transporter family BFO_1135 PF06271 BFO_1135 BFO_1136 PF00932 Lamin Tail Domain BFO_1137 PF01207 Dihydrouridine synthase (Dus) BFO_1138 PF01118 Semialdehyde dehydrogenase, NAD binding domain BFO_1138 PF02774 Semialdehyde dehydrogenase, dimerisation domain BFO_1139 PF00581 Rhodanese-like domain BFO_1140 PF13715 BFO_1140 BFO_1140 PF14905 Outer membrane protein beta-barrel family BFO_1141 PF12760 Transposase zinc-ribbon domain BFO_1141 PF12762 BFO_1141 BFO_1146 PF00196 Bacterial regulatory proteins, luxR family BFO_1150 PF00581 Rhodanese-like domain BFO_1151 PF00884 Sulfatase BFO_1152 PF03819 MazG nucleotide pyrophosphohydrolase domain BFO_1153 PF00485 Phosphoribulokinase / Uridine kinase family BFO_1154 PF01791 DeoC/LacD family aldolase BFO_1155 PF01895 PhoU domain BFO_1155 PF02690 BFO_1155 BFO_1156 PF02614 Glucuronate isomerase BFO_1157 PF00365 Phosphofructokinase BFO_1159 PF01609 Transposase DDE domain BFO_1159 PF05598 BFO_1159 BFO_1162 PF01944 BFO_1162 BFO_1164 PF13559 BFO_1164 BFO_1166 PF07726 ATPase family associated with various cellular activities (AAA) BFO_1167 PF01882 BFO_1167 BFO_1168 PF01447 Thermolysin metallopeptidase, catalytic domain BFO_1168 PF02868 Thermolysin metallopeptidase, alpha-helical domain BFO_1179 PF13365 Trypsin-like peptidase domain BFO_1182 PF00754 F5/8 type C domain BFO_1182 PF01120 Alpha-L-fucosidase BFO_1182 PF13287 BFO_1182 BFO_1183 PF01914 BFO_1183 BFO_1185 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BFO_1185 PF02843 Phosphoribosylglycinamide synthetase, C domain BFO_1185 PF02844 Phosphoribosylglycinamide synthetase, N domain BFO_1187 PF09335 BFO_1187 BFO_1189 PF12146 Putative lysophospholipase BFO_1191 PF07715 TonB-dependent Receptor Plug Domain BFO_1191 PF13715 BFO_1191 BFO_1192 PF07980 SusD family BFO_1192 PF14322 Starch-binding associating with outer membrane BFO_1193 PF13385 Concanavalin A-like lectin/glucanases superfamily BFO_1194 PF02230 Phospholipase/Carboxylesterase BFO_1195 PF10091 Putative glucoamylase BFO_1197 PF07980 SusD family BFO_1197 PF14322 Starch-binding associating with outer membrane BFO_1198 PF00593 TonB dependent receptor BFO_1198 PF07715 TonB-dependent Receptor Plug Domain BFO_1198 PF13715 BFO_1198 BFO_1202 PF07980 SusD family BFO_1202 PF14322 Starch-binding associating with outer membrane BFO_1208 PF00196 Bacterial regulatory proteins, luxR family BFO_1209 PF01261 Xylose isomerase-like TIM barrel BFO_1209 PF10518 TAT (twin-arginine translocation) pathway signal sequence BFO_1210 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BFO_1211 PF03264 NapC/NirT cytochrome c family, N-terminal region BFO_1211 PF03781 Sulfatase-modifying factor enzyme 1 BFO_1215 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BFO_1215 PF03129 Anticodon binding domain BFO_1216 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BFO_1217 PF16011 BFO_1217 BFO_1218 PF05681 BFO_1218 BFO_1218 PF05683 Fumarase C-terminus BFO_1220 PF00072 Response regulator receiver domain BFO_1220 PF00486 Transcriptional regulatory protein, C terminal BFO_1221 PF00512 His Kinase A (phospho-acceptor) domain BFO_1221 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BFO_1222 PF00589 Phage integrase family BFO_1222 PF13102 Phage integrase SAM-like domain BFO_1222 PF17293 BFO_1222 BFO_1224 PF12728 Helix-turn-helix domain BFO_1226 PF12728 Helix-turn-helix domain BFO_1227 PF12728 Helix-turn-helix domain BFO_1229 PF13101 BFO_1229 BFO_1229 PF13351 BFO_1229 BFO_1230 PF01131 DNA topoisomerase BFO_1230 PF01751 Toprim domain BFO_1230 PF13342 BFO_1230 BFO_1232 PF00176 SNF2 family N-terminal domain BFO_1232 PF00271 Helicase conserved C-terminal domain BFO_1232 PF02384 N-6 DNA Methylase BFO_1233 PF12680 SnoaL-like domain BFO_1234 PF00583 Acetyltransferase (GNAT) family BFO_1234 PF13673 Acetyltransferase (GNAT) domain BFO_1235 PF00009 Elongation factor Tu GTP binding domain BFO_1235 PF00679 Elongation factor G C-terminus BFO_1235 PF03764 Elongation factor G, domain IV BFO_1235 PF14492 Elongation Factor G, domain II BFO_1236 PF00072 Response regulator receiver domain BFO_1236 PF00512 His Kinase A (phospho-acceptor) domain BFO_1236 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BFO_1237 PF00072 Response regulator receiver domain BFO_1237 PF00158 Sigma-54 interaction domain BFO_1237 PF02954 Bacterial regulatory protein, Fis family BFO_1238 PF01872 RibD C-terminal domain BFO_1241 PF04326 Divergent AAA domain BFO_1241 PF13749 ATP-dependent DNA helicase recG C-terminal BFO_1243 PF12696 TraM recognition site of TraD and TraG BFO_1243 PF14293 BFO_1243 BFO_1244 PF03432 BFO_1244 BFO_1246 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BFO_1247 PF11888 BFO_1247 BFO_1248 PF11888 BFO_1248 BFO_1250 PF13572 BFO_1250 BFO_1251 PF13571 BFO_1251 BFO_1252 PF12991 BFO_1252 BFO_1253 PF12992 BFO_1253 BFO_1254 PF13605 BFO_1254 BFO_1255 PF07863 BFO_1255 BFO_1257 PF13150 BFO_1257 BFO_1258 PF12508 BFO_1258 BFO_1259 PF13595 BFO_1259 BFO_1260 PF10626 BFO_1260 BFO_1261 PF01807 CHC2 zinc finger BFO_1261 PF13155 Toprim-like BFO_1262 PF12988 Domain of unknown function, B BFO_1267 PF12989 BFO_1267 BFO_1269 PF14284 BFO_1269 BFO_1270 PF14058 BFO_1270 BFO_1284 PF13396 BFO_1284 BFO_1286 PF13437 HlyD family secretion protein BFO_1286 PF13533 Biotin-lipoyl like BFO_1287 PF00005 ABC transporter BFO_1287 PF00664 ABC transporter transmembrane region BFO_1287 PF03412 Peptidase C39 family BFO_1288 PF02321 Outer membrane efflux protein BFO_1297 PF16313 BFO_1297 BFO_1297 PF17148 BFO_1297 BFO_1297 PF17162 BFO_1297 BFO_1298 PF00593 TonB dependent receptor BFO_1298 PF07715 TonB-dependent Receptor Plug Domain BFO_1298 PF13715 BFO_1298 BFO_1299 PF07980 SusD family BFO_1299 PF14322 Starch-binding associating with outer membrane BFO_1301 PF12760 Transposase zinc-ribbon domain BFO_1301 PF12762 BFO_1301 BFO_1302 PF00691 OmpA family BFO_1302 PF07676 WD40-like Beta Propeller Repeat BFO_1302 PF13176 Tetratricopeptide repeat BFO_1303 PF02547 Queuosine biosynthesis protein BFO_1304 PF00072 Response regulator receiver domain BFO_1304 PF00512 His Kinase A (phospho-acceptor) domain BFO_1304 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BFO_1304 PF07494 Two component regulator propeller BFO_1304 PF07495 Y_Y_Y domain BFO_1304 PF12833 Helix-turn-helix domain BFO_1307 PF01406 tRNA synthetases class I (C) catalytic domain BFO_1307 PF09190 DALR domain BFO_1308 PF13561 Enoyl-(Acyl carrier protein) reductase BFO_1309 PF00550 Phosphopantetheine attachment site BFO_1310 PF03279 BFO_1310 BFO_1311 PF00891 O-methyltransferase BFO_1313 PF13279 Thioesterase-like superfamily BFO_1314 PF00109 Beta-ketoacyl synthase, N-terminal domain BFO_1314 PF02801 Beta-ketoacyl synthase, C-terminal domain BFO_1316 PF00550 Phosphopantetheine attachment site BFO_1319 PF13905 Thioredoxin-like BFO_1319 PF17127 BFO_1319 BFO_1320 PF01923 Cobalamin adenosyltransferase BFO_1321 PF11387 BFO_1321 BFO_1322 PF11751 BFO_1322 BFO_1323 PF03781 Sulfatase-modifying factor enzyme 1 BFO_1325 PF12080 BFO_1325 BFO_1325 PF12081 BFO_1325 BFO_1327 PF08889 BFO_1327 BFO_1328 PF00717 Peptidase S24-like BFO_1329 PF00717 Peptidase S24-like BFO_1330 PF01113 Dihydrodipicolinate reductase, N-terminus BFO_1330 PF05173 Dihydrodipicolinate reductase, C-terminus BFO_1331 PF11013 BFO_1331 BFO_1332 PF13205 Bacterial Ig-like domain BFO_1333 PF11306 Protein of unknown function (DUF3108) BFO_1334 PF12784 BFO_1334 BFO_1338 PF00255 Glutathione peroxidase BFO_1339 PF01765 Ribosome recycling factor BFO_1340 PF03193 Protein of unknown function, DUF258 BFO_1340 PF16745 BFO_1340 BFO_1341 PF01966 HD domain BFO_1341 PF13286 Phosphohydrolase-associated domain BFO_1344 PF12741 Susd and RagB outer membrane lipoprotein BFO_1345 PF00871 Acetokinase family BFO_1346 PF01515 Phosphate acetyl/butaryl transferase BFO_1347 PF02457 DisA bacterial checkpoint controller nucleotide-binding BFO_1348 PF00809 Pterin binding enzyme BFO_1349 PF01225 Mur ligase family, catalytic domain BFO_1349 PF02875 Mur ligase family, glutamate ligase domain BFO_1349 PF08245 Mur ligase middle domain BFO_1350 PF01569 PAP2 superfamily BFO_1352 PF01136 BFO_1352 BFO_1353 PF00924 Mechanosensitive ion channel BFO_1357 PF08843 Nucleotidyl transferase of unknown function (DUF1814) BFO_1359 PF07751 BFO_1359 BFO_1360 PF12728 Helix-turn-helix domain BFO_1363 PF00171 Aldehyde dehydrogenase family BFO_1364 PF01048 Phosphorylase superfamily BFO_1365 PF07676 WD40-like Beta Propeller Repeat BFO_1365 PF13432 Tetratricopeptide repeat BFO_1366 PF01715 IPP transferase BFO_1367 PF07929 Plasmid pRiA4b ORF-3-like protein BFO_1368 PF00132 Bacterial transferase hexapeptide (six repeats) BFO_1368 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BFO_1369 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BFO_1369 PF07977 FabA-like domain BFO_1370 PF00132 Bacterial transferase hexapeptide (six repeats) BFO_1370 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BFO_1370 PF14602 Hexapeptide repeat of succinyl-transferase BFO_1372 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BFO_1373 PF00472 RF-1 domain BFO_1373 PF03462 PCRF domain BFO_1374 PF02769 AIR synthase related protein, C-terminal domain BFO_1375 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BFO_1376 PF01476 LysM domain BFO_1376 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BFO_1378 PF01548 BFO_1378 BFO_1378 PF02371 BFO_1378 BFO_1379 PF02683 BFO_1379 BFO_1379 PF11412 Disulphide bond corrector protein DsbC BFO_1379 PF13899 Thioredoxin-like BFO_1380 PF03819 MazG nucleotide pyrophosphohydrolase domain BFO_1381 PF00703 Glycosyl hydrolases family 2 BFO_1381 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BFO_1381 PF02837 Glycosyl hydrolases family 2, sugar binding domain BFO_1381 PF11721 Di-glucose binding within endoplasmic reticulum BFO_1382 PF13701 BFO_1382 BFO_1383 PF07715 TonB-dependent Receptor Plug Domain BFO_1383 PF13715 BFO_1383 BFO_1383 PF14905 Outer membrane protein beta-barrel family BFO_1386 PF00149 Calcineurin-like phosphoesterase BFO_1386 PF16656 BFO_1386 BFO_1388 PF02065 Melibiase BFO_1389 PF00589 Phage integrase family BFO_1389 PF02899 Phage integrase, N-terminal SAM-like domain BFO_1390 PF03706 BFO_1390 BFO_1391 PF00398 Ribosomal RNA adenine dimethylase BFO_1392 PF01544 CorA-like Mg2+ transporter protein BFO_1393 PF01078 Magnesium chelatase, subunit ChlI BFO_1393 PF13335 BFO_1393 BFO_1393 PF13541 Subunit ChlI of Mg-chelatase BFO_1395 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BFO_1396 PF16401 BFO_1396 BFO_1397 PF16116 BFO_1397 BFO_1397 PF16173 BFO_1397 BFO_1398 PF07980 SusD family BFO_1398 PF14322 Starch-binding associating with outer membrane BFO_1399 PF00593 TonB dependent receptor BFO_1399 PF07660 Secretin and TonB N terminus short domain BFO_1399 PF07715 TonB-dependent Receptor Plug Domain BFO_1399 PF13715 BFO_1399 BFO_1400 PF04542 Sigma-70 region 2 BFO_1400 PF08281 Sigma-70, region 4 BFO_1401 PF00535 Glycosyl transferase family 2 BFO_1402 PF04773 FecR protein BFO_1402 PF16344 BFO_1402 BFO_1403 PF04138 BFO_1403 BFO_1405 PF00331 Glycosyl hydrolase family 10 BFO_1406 PF07980 SusD family BFO_1406 PF14322 Starch-binding associating with outer membrane BFO_1407 PF00593 TonB dependent receptor BFO_1407 PF07715 TonB-dependent Receptor Plug Domain BFO_1407 PF13715 BFO_1407 BFO_1410 PF16403 BFO_1410 BFO_1410 PF16404 BFO_1410 BFO_1411 PF12771 Starch-binding associating with outer membrane BFO_1412 PF00593 TonB dependent receptor BFO_1412 PF07715 TonB-dependent Receptor Plug Domain BFO_1412 PF13715 BFO_1412 BFO_1414 PF01926 50S ribosome-binding GTPase BFO_1414 PF06071 Protein of unknown function (DUF933) BFO_1415 PF12836 Helix-hairpin-helix motif BFO_1419 PF00112 Papain family cysteine protease BFO_1422 PF13715 BFO_1422 BFO_1422 PF14905 Outer membrane protein beta-barrel family BFO_1424 PF04055 Radical SAM superfamily BFO_1424 PF13353 4Fe-4S single cluster domain BFO_1425 PF13715 BFO_1425 BFO_1425 PF14905 Outer membrane protein beta-barrel family BFO_1426 PF00005 ABC transporter BFO_1426 PF00664 ABC transporter transmembrane region BFO_1426 PF03412 Peptidase C39 family BFO_1428 PF00149 Calcineurin-like phosphoesterase BFO_1429 PF01883 Domain of unknown function DUF59 BFO_1430 PF04002 RadC-like JAB domain BFO_1431 PF01132 Elongation factor P (EF-P) OB domain BFO_1431 PF08207 Elongation factor P (EF-P) KOW-like domain BFO_1431 PF09285 Elongation factor P, C-terminal BFO_1434 PF01928 CYTH domain BFO_1435 PF01713 Smr domain BFO_1435 PF09640 Domain of unknown function (DUF2027) BFO_1436 PF00166 Chaperonin 10 Kd subunit BFO_1437 PF00118 TCP-1/cpn60 chaperonin family BFO_1438 PF00156 Phosphoribosyl transferase domain BFO_1439 PF02631 RecX family BFO_1440 PF05175 Methyltransferase small domain BFO_1441 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BFO_1441 PF01872 RibD C-terminal domain BFO_1444 PF01255 Putative undecaprenyl diphosphate synthase BFO_1445 PF07244 Surface antigen variable number repeat BFO_1446 PF03938 Outer membrane protein (OmpH-like) BFO_1447 PF03938 Outer membrane protein (OmpH-like) BFO_1448 PF01177 Asp/Glu/Hydantoin racemase BFO_1449 PF01427 D-ala-D-ala dipeptidase BFO_1450 PF03733 BFO_1450 BFO_1451 PF00005 ABC transporter BFO_1452 PF01297 Periplasmic solute binding protein family BFO_1452 PF02687 BFO_1452 BFO_1452 PF12704 MacB-like periplasmic core domain BFO_1453 PF02033 Ribosome-binding factor A BFO_1454 PF03372 Endonuclease/Exonuclease/phosphatase family BFO_1455 PF07980 SusD family BFO_1455 PF14322 Starch-binding associating with outer membrane BFO_1456 PF07660 Secretin and TonB N terminus short domain BFO_1456 PF07715 TonB-dependent Receptor Plug Domain BFO_1456 PF13715 BFO_1456 BFO_1457 PF04773 FecR protein BFO_1457 PF16344 BFO_1457 BFO_1458 PF04542 Sigma-70 region 2 BFO_1458 PF08281 Sigma-70, region 4 BFO_1459 PF01596 O-methyltransferase BFO_1460 PF00224 Pyruvate kinase, barrel domain BFO_1460 PF02887 Pyruvate kinase, alpha/beta domain BFO_1461 PF01220 Dehydroquinase class II BFO_1465 PF04055 Radical SAM superfamily BFO_1465 PF13186 Iron-sulfur cluster-binding domain BFO_1466 PF08241 Methyltransferase domain BFO_1467 PF13185 GAF domain BFO_1468 PF02824 TGS domain BFO_1468 PF04607 Region found in RelA / SpoT proteins BFO_1468 PF13291 ACT domain BFO_1468 PF13328 HD domain BFO_1469 PF01743 Poly A polymerase head domain BFO_1469 PF01966 HD domain BFO_1469 PF12627 Probable RNA and SrmB- binding site of polymerase A BFO_1470 PF13419 Haloacid dehalogenase-like hydrolase BFO_1472 PF12760 Transposase zinc-ribbon domain BFO_1472 PF12762 BFO_1472 BFO_1474 PF01640 Peptidase C10 family BFO_1484 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal BFO_1484 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal BFO_1485 PF01106 NifU-like domain BFO_1486 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BFO_1486 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BFO_1487 PF00465 Iron-containing alcohol dehydrogenase BFO_1488 PF00171 Aldehyde dehydrogenase family BFO_1489 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BFO_1489 PF02770 Acyl-CoA dehydrogenase, middle domain BFO_1489 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BFO_1490 PF01012 Electron transfer flavoprotein domain BFO_1491 PF00766 Electron transfer flavoprotein FAD-binding domain BFO_1491 PF01012 Electron transfer flavoprotein domain BFO_1492 PF03061 Thioesterase superfamily BFO_1493 PF00005 ABC transporter BFO_1494 PF01119 DNA mismatch repair protein, C-terminal domain BFO_1494 PF08676 MutL C terminal dimerisation domain BFO_1494 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BFO_1496 PF13100 BFO_1496 BFO_1497 PF00639 PPIC-type PPIASE domain BFO_1499 PF00639 PPIC-type PPIASE domain BFO_1499 PF13616 PPIC-type PPIASE domain BFO_1500 PF00270 DEAD/DEAH box helicase BFO_1500 PF00271 Helicase conserved C-terminal domain BFO_1500 PF00570 HRDC domain BFO_1500 PF09382 RQC domain BFO_1500 PF16124 BFO_1500 BFO_1501 PF06689 ClpX C4-type zinc finger BFO_1501 PF07724 AAA domain (Cdc48 subfamily) BFO_1501 PF10431 C-terminal, D2-small domain, of ClpB protein BFO_1502 PF00574 Clp protease BFO_1503 PF05697 Bacterial trigger factor protein (TF) BFO_1505 PF00076 RNA recognition motif BFO_1509 PF04542 Sigma-70 region 2 BFO_1509 PF08281 Sigma-70, region 4 BFO_1510 PF00593 TonB dependent receptor BFO_1510 PF07715 TonB-dependent Receptor Plug Domain BFO_1511 PF00270 DEAD/DEAH box helicase BFO_1511 PF00271 Helicase conserved C-terminal domain BFO_1511 PF17191 BFO_1511 BFO_1512 PF01551 Peptidase family M23 BFO_1513 PF14125 BFO_1513 BFO_1514 PF07719 Tetratricopeptide repeat BFO_1514 PF13181 Tetratricopeptide repeat BFO_1514 PF13432 Tetratricopeptide repeat BFO_1514 PF14559 Tetratricopeptide repeat BFO_1515 PF00692 dUTPase BFO_1516 PF00881 Nitroreductase family BFO_1517 PF03372 Endonuclease/Exonuclease/phosphatase family BFO_1518 PF12771 Starch-binding associating with outer membrane BFO_1519 PF07715 TonB-dependent Receptor Plug Domain BFO_1519 PF13715 BFO_1519 BFO_1520 PF04773 FecR protein BFO_1520 PF16344 BFO_1520 BFO_1521 PF00483 Nucleotidyl transferase BFO_1522 PF04542 Sigma-70 region 2 BFO_1522 PF08281 Sigma-70, region 4 BFO_1523 PF01636 Phosphotransferase enzyme family BFO_1523 PF03668 BFO_1523 BFO_1524 PF03571 Peptidase family M49 BFO_1525 PF01475 Ferric uptake regulator family BFO_1526 PF00709 Adenylosuccinate synthetase BFO_1527 PF04298 BFO_1527 BFO_1528 PF03129 Anticodon binding domain BFO_1528 PF13393 Histidyl-tRNA synthetase BFO_1529 PF00082 Subtilase family BFO_1534 PF01610 BFO_1534 BFO_1534 PF13542 BFO_1534 BFO_1535 PF01131 DNA topoisomerase BFO_1535 PF01751 Toprim domain BFO_1536 PF04542 Sigma-70 region 2 BFO_1536 PF08281 Sigma-70, region 4 BFO_1537 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BFO_1539 PF00438 S-adenosylmethionine synthetase, N-terminal domain BFO_1539 PF02772 S-adenosylmethionine synthetase, central domain BFO_1539 PF02773 S-adenosylmethionine synthetase, C-terminal domain BFO_1541 PF00164 Ribosomal protein S12/S23 BFO_1542 PF00177 Ribosomal protein S7p/S5e BFO_1543 PF00009 Elongation factor Tu GTP binding domain BFO_1543 PF00679 Elongation factor G C-terminus BFO_1543 PF03144 Elongation factor Tu domain 2 BFO_1543 PF03764 Elongation factor G, domain IV BFO_1543 PF14492 Elongation Factor G, domain II BFO_1544 PF00338 Ribosomal protein S10p/S20e BFO_1545 PF00297 Ribosomal protein L3 BFO_1546 PF00573 Ribosomal protein L4/L1 family BFO_1547 PF00276 Ribosomal protein L23 BFO_1548 PF00181 Ribosomal Proteins L2, RNA binding domain BFO_1548 PF03947 Ribosomal Proteins L2, C-terminal domain BFO_1550 PF00203 Ribosomal protein S19 BFO_1551 PF00237 Ribosomal protein L22p/L17e BFO_1552 PF00189 Ribosomal protein S3, C-terminal domain BFO_1552 PF07650 KH domain BFO_1553 PF00252 Ribosomal protein L16p/L10e BFO_1554 PF00831 Ribosomal L29 protein BFO_1555 PF00366 Ribosomal protein S17 BFO_1556 PF00238 Ribosomal protein L14p/L23e BFO_1557 PF17136 BFO_1557 BFO_1558 PF00281 Ribosomal protein L5 BFO_1558 PF00673 ribosomal L5P family C-terminus BFO_1559 PF00253 Ribosomal protein S14p/S29e BFO_1560 PF00410 Ribosomal protein S8 BFO_1561 PF00347 Ribosomal protein L6 BFO_1562 PF00861 Ribosomal L18p/L5e family BFO_1563 PF00333 Ribosomal protein S5, N-terminal domain BFO_1563 PF03719 Ribosomal protein S5, C-terminal domain BFO_1564 PF00327 Ribosomal protein L30p/L7e BFO_1565 PF00828 Ribosomal protein L18e/L15 BFO_1566 PF00344 SecY translocase BFO_1567 PF00557 Metallopeptidase family M24 BFO_1568 PF01176 Translation initiation factor 1A / IF-1 BFO_1569 PF00444 Ribosomal protein L36 BFO_1570 PF00416 Ribosomal protein S13/S18 BFO_1571 PF00411 Ribosomal protein S11 BFO_1572 PF00163 Ribosomal protein S4/S9 N-terminal domain BFO_1572 PF01479 S4 domain BFO_1573 PF01000 RNA polymerase Rpb3/RpoA insert domain BFO_1573 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BFO_1573 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BFO_1574 PF01196 Ribosomal protein L17 BFO_1575 PF00005 ABC transporter BFO_1576 PF02405 BFO_1576 BFO_1578 PF13671 AAA domain BFO_1580 PF04055 Radical SAM superfamily BFO_1581 PF00009 Elongation factor Tu GTP binding domain BFO_1581 PF00679 Elongation factor G C-terminus BFO_1581 PF03144 Elongation factor Tu domain 2 BFO_1581 PF03764 Elongation factor G, domain IV BFO_1581 PF14492 Elongation Factor G, domain II BFO_1582 PF01609 Transposase DDE domain BFO_1582 PF05598 BFO_1582 BFO_1583 PF01548 BFO_1583 BFO_1583 PF02371 BFO_1583 BFO_1585 PF17517 BFO_1585 BFO_1586 PF13520 Amino acid permease BFO_1589 PF16215 BFO_1589 BFO_1590 PF07715 TonB-dependent Receptor Plug Domain BFO_1590 PF13715 BFO_1590 BFO_1591 PF01734 Patatin-like phospholipase BFO_1592 PF00128 Alpha amylase, catalytic domain BFO_1593 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BFO_1593 PF14572 Phosphoribosyl synthetase-associated domain BFO_1594 PF07883 Cupin domain BFO_1595 PF03054 tRNA methyl transferase BFO_1596 PF00440 Bacterial regulatory proteins, tetR family BFO_1597 PF03176 MMPL family BFO_1598 PF07715 TonB-dependent Receptor Plug Domain BFO_1598 PF13715 BFO_1598 BFO_1598 PF14905 Outer membrane protein beta-barrel family BFO_1601 PF14196 BFO_1601 BFO_1603 PF03577 BFO_1603 BFO_1604 PF00881 Nitroreductase family BFO_1605 PF17131 BFO_1605 BFO_1606 PF05635 23S rRNA-intervening sequence protein BFO_1609 PF04191 Phospholipid methyltransferase BFO_1610 PF00593 TonB dependent receptor BFO_1610 PF07715 TonB-dependent Receptor Plug Domain BFO_1610 PF13715 BFO_1610 BFO_1612 PF02535 BFO_1612 BFO_1614 PF08241 Methyltransferase domain BFO_1615 PF08241 Methyltransferase domain BFO_1616 PF13649 Methyltransferase domain BFO_1617 PF04383 KilA-N domain BFO_1618 PF08241 Methyltransferase domain BFO_1620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BFO_1622 PF00005 ABC transporter BFO_1622 PF00664 ABC transporter transmembrane region BFO_1623 PF05635 23S rRNA-intervening sequence protein BFO_1624 PF00005 ABC transporter BFO_1624 PF00664 ABC transporter transmembrane region BFO_1625 PF04960 Glutaminase BFO_1627 PF01545 Cation efflux family BFO_1629 PF01687 Riboflavin kinase BFO_1629 PF06574 FAD synthetase BFO_1630 PF01546 Peptidase family M20/M25/M40 BFO_1630 PF07687 Peptidase dimerisation domain BFO_1631 PF14667 Polysaccharide biosynthesis C-terminal domain BFO_1632 PF04263 Thiamin pyrophosphokinase, catalytic domain BFO_1634 PF02368 Bacterial Ig-like domain (group 2) BFO_1635 PF04055 Radical SAM superfamily BFO_1635 PF13186 Iron-sulfur cluster-binding domain BFO_1637 PF00890 FAD binding domain BFO_1637 PF02910 Fumarate reductase flavoprotein C-term BFO_1638 PF13085 2Fe-2S iron-sulfur cluster binding domain BFO_1638 PF13183 4Fe-4S dicluster domain BFO_1640 PF00750 tRNA synthetases class I (R) BFO_1640 PF03485 Arginyl tRNA synthetase N terminal domain BFO_1640 PF05746 DALR anticodon binding domain BFO_1641 PF01131 DNA topoisomerase BFO_1641 PF01751 Toprim domain BFO_1641 PF13368 BFO_1641 BFO_1643 PF00133 tRNA synthetases class I (I, L, M and V) BFO_1643 PF08264 Anticodon-binding domain of tRNA BFO_1643 PF10458 Valyl tRNA synthetase tRNA binding arm BFO_1645 PF01610 BFO_1645 BFO_1645 PF13542 BFO_1645 BFO_1658 PF04055 Radical SAM superfamily BFO_1658 PF16199 BFO_1658 BFO_1659 PF00326 Prolyl oligopeptidase family BFO_1659 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BFO_1660 PF04055 Radical SAM superfamily BFO_1661 PF12850 Calcineurin-like phosphoesterase superfamily domain BFO_1663 PF12873 BFO_1663 BFO_1664 PF13201 Putative glycoside hydrolase xylanase BFO_1665 PF00155 Aminotransferase class I and II BFO_1666 PF00925 GTP cyclohydrolase II BFO_1666 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BFO_1667 PF03739 BFO_1667 BFO_1670 PF02576 Uncharacterised BCR, YhbC family COG0779 BFO_1671 PF08529 NusA N-terminal domain BFO_1671 PF13184 NusA-like KH domain BFO_1672 PF00009 Elongation factor Tu GTP binding domain BFO_1672 PF04760 Translation initiation factor IF-2, N-terminal region BFO_1672 PF11987 Translation-initiation factor 2 BFO_1673 PF02674 BFO_1673 BFO_1674 PF01458 Uncharacterized protein family (UPF0051) BFO_1675 PF00005 ABC transporter BFO_1676 PF01458 Uncharacterized protein family (UPF0051) BFO_1678 PF01594 BFO_1678 BFO_1679 PF02153 Prephenate dehydrogenase BFO_1680 PF00793 DAHP synthetase I family BFO_1680 PF01817 Chorismate mutase type II BFO_1681 PF00155 Aminotransferase class I and II BFO_1682 PF00800 Prephenate dehydratase BFO_1683 PF00106 short chain dehydrogenase BFO_1685 PF00011 Hsp20/alpha crystallin family BFO_1687 PF00266 Aminotransferase class-V BFO_1688 PF00756 Putative esterase BFO_1690 PF01906 Putative heavy-metal-binding BFO_1691 PF01351 Ribonuclease HII BFO_1692 PF02657 Fe-S metabolism associated domain BFO_1693 PF04389 Peptidase family M28 BFO_1694 PF01244 Membrane dipeptidase (Peptidase family M19) BFO_1694 PF07722 Peptidase C26 BFO_1695 PF00204 DNA gyrase B BFO_1695 PF00986 DNA gyrase B subunit, carboxyl terminus BFO_1695 PF01751 Toprim domain BFO_1695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BFO_1697 PF00005 ABC transporter BFO_1697 PF00664 ABC transporter transmembrane region BFO_1697 PF03412 Peptidase C39 family BFO_1698 PF13437 HlyD family secretion protein BFO_1700 PF00534 Glycosyl transferases group 1 BFO_1700 PF13439 Glycosyltransferase Family 4 BFO_1705 PF00534 Glycosyl transferases group 1 BFO_1705 PF05147 Lanthionine synthetase C-like protein BFO_1705 PF13439 Glycosyltransferase Family 4 BFO_1707 PF05139 Erythromycin esterase BFO_1712 PF01649 Ribosomal protein S20 BFO_1714 PF04773 FecR protein BFO_1714 PF16344 BFO_1714 BFO_1715 PF00593 TonB dependent receptor BFO_1715 PF07715 TonB-dependent Receptor Plug Domain BFO_1715 PF13715 BFO_1715 BFO_1718 PF00593 TonB dependent receptor BFO_1718 PF07715 TonB-dependent Receptor Plug Domain BFO_1718 PF13715 BFO_1718 BFO_1719 PF07980 SusD family BFO_1719 PF14322 Starch-binding associating with outer membrane BFO_1720 PF13905 Thioredoxin-like BFO_1720 PF14289 BFO_1720 BFO_1721 PF01475 Ferric uptake regulator family BFO_1722 PF00085 Thioredoxin BFO_1723 PF02811 PHP domain BFO_1723 PF07733 Bacterial DNA polymerase III alpha subunit BFO_1723 PF14579 Helix-hairpin-helix motif BFO_1724 PF13568 Outer membrane protein beta-barrel domain BFO_1726 PF02142 MGS-like domain BFO_1727 PF13181 Tetratricopeptide repeat BFO_1727 PF13414 TPR repeat BFO_1728 PF00886 Ribosomal protein S16 BFO_1729 PF00085 Thioredoxin BFO_1731 PF00270 DEAD/DEAH box helicase BFO_1731 PF00271 Helicase conserved C-terminal domain BFO_1731 PF16124 BFO_1731 BFO_1733 PF01368 DHH family BFO_1733 PF02272 DHHA1 domain BFO_1735 PF04306 BFO_1735 BFO_1736 PF00551 Formyl transferase BFO_1736 PF02911 Formyl transferase, C-terminal domain BFO_1739 PF00183 Hsp90 protein BFO_1739 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BFO_1740 PF00004 ATPase family associated with various cellular activities (AAA) BFO_1740 PF02151 UvrB/uvrC motif BFO_1740 PF02861 Clp amino terminal domain BFO_1740 PF07724 AAA domain (Cdc48 subfamily) BFO_1740 PF10431 C-terminal, D2-small domain, of ClpB protein BFO_1741 PF00571 CBS domain BFO_1741 PF01595 BFO_1741 BFO_1741 PF03471 Transporter associated domain BFO_1742 PF03313 BFO_1742 BFO_1742 PF03315 Serine dehydratase beta chain BFO_1743 PF01409 tRNA synthetases class II core domain (F) BFO_1743 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BFO_1744 PF00633 Helix-hairpin-helix motif BFO_1744 PF00730 HhH-GPD superfamily base excision DNA repair protein BFO_1745 PF00675 Insulinase (Peptidase family M16) BFO_1745 PF05193 Peptidase M16 inactive domain BFO_1748 PF03385 BFO_1748 BFO_1750 PF00480 ROK family BFO_1750 PF13412 Winged helix-turn-helix DNA-binding BFO_1752 PF01047 MarR family BFO_1753 PF00085 Thioredoxin BFO_1755 PF00581 Rhodanese-like domain BFO_1755 PF01206 Sulfurtransferase TusA BFO_1755 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BFO_1755 PF07992 Pyridine nucleotide-disulphide oxidoreductase BFO_1755 PF13686 DsrE/DsrF/DrsH-like family BFO_1757 PF00082 Subtilase family BFO_1759 PF01202 Shikimate kinase BFO_1760 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BFO_1760 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BFO_1760 PF17147 BFO_1760 BFO_1761 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BFO_1763 PF11297 BFO_1763 BFO_1764 PF02673 BFO_1764 BFO_1765 PF01509 TruB family pseudouridylate synthase (N terminal domain) BFO_1765 PF16198 BFO_1765 BFO_1766 PF02547 Queuosine biosynthesis protein BFO_1767 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BFO_1768 PF13598 BFO_1768 BFO_1768 PF13600 BFO_1768 BFO_1769 PF00593 TonB dependent receptor BFO_1769 PF07715 TonB-dependent Receptor Plug Domain BFO_1772 PF07690 Major Facilitator Superfamily BFO_1773 PF02368 Bacterial Ig-like domain (group 2) BFO_1774 PF13568 Outer membrane protein beta-barrel domain BFO_1777 PF00155 Aminotransferase class I and II BFO_1778 PF04542 Sigma-70 region 2 BFO_1778 PF08281 Sigma-70, region 4 BFO_1780 PF00575 S1 RNA binding domain BFO_1782 PF13561 Enoyl-(Acyl carrier protein) reductase BFO_1783 PF03063 Prismane/CO dehydrogenase family BFO_1785 PF00009 Elongation factor Tu GTP binding domain BFO_1785 PF00679 Elongation factor G C-terminus BFO_1785 PF03144 Elongation factor Tu domain 2 BFO_1786 PF00312 Ribosomal protein S15 BFO_1789 PF00027 Cyclic nucleotide-binding domain BFO_1789 PF13545 Crp-like helix-turn-helix domain BFO_1791 PF02322 BFO_1791 BFO_1792 PF01654 BFO_1792 BFO_1793 PF14899 BFO_1793 BFO_1794 PF04542 Sigma-70 region 2 BFO_1794 PF08281 Sigma-70, region 4 BFO_1795 PF04773 FecR protein BFO_1795 PF16344 BFO_1795 BFO_1796 PF07660 Secretin and TonB N terminus short domain BFO_1796 PF07715 TonB-dependent Receptor Plug Domain BFO_1796 PF13715 BFO_1796 BFO_1797 PF07980 SusD family BFO_1797 PF14322 Starch-binding associating with outer membrane BFO_1798 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BFO_1799 PF06439 Domain of Unknown Function (DUF1080) BFO_1800 PF12667 NigD-like protein BFO_1800 PF17415 BFO_1800 BFO_1801 PF00675 Insulinase (Peptidase family M16) BFO_1801 PF05193 Peptidase M16 inactive domain BFO_1802 PF00571 CBS domain BFO_1802 PF00654 Voltage gated chloride channel BFO_1803 PF02397 BFO_1803 BFO_1803 PF13727 CoA-binding domain BFO_1804 PF01300 Telomere recombination BFO_1806 PF14391 BFO_1806 BFO_1807 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BFO_1809 PF00258 Flavodoxin BFO_1809 PF00753 Metallo-beta-lactamase superfamily BFO_1810 PF01790 BFO_1810 BFO_1811 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BFO_1811 PF16654 BFO_1811 BFO_1812 PF00202 Aminotransferase class-III BFO_1813 PF01118 Semialdehyde dehydrogenase, NAD binding domain BFO_1813 PF02774 Semialdehyde dehydrogenase, dimerisation domain BFO_1814 PF00764 Arginosuccinate synthase BFO_1816 PF01316 Arginine repressor, DNA binding domain BFO_1816 PF02863 Arginine repressor, C-terminal domain BFO_1819 PF03825 BFO_1819 BFO_1821 PF01548 BFO_1821 BFO_1821 PF02371 BFO_1821 BFO_1825 PF14399 BFO_1825 BFO_1825 PF16169 BFO_1825 BFO_1826 PF00005 ABC transporter BFO_1827 PF12698 ABC-2 family transporter protein BFO_1828 PF00375 Sodium:dicarboxylate symporter family BFO_1829 PF02684 BFO_1829 BFO_1830 PF01975 Survival protein SurE BFO_1831 PF03602 Conserved hypothetical protein 95 BFO_1832 PF13091 PLD-like domain BFO_1832 PF13396 BFO_1832 BFO_1833 PF12864 Protein of unknown function (DUF3822) BFO_1835 PF13538 UvrD-like helicase C-terminal domain BFO_1835 PF13604 AAA domain BFO_1838 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BFO_1840 PF13419 Haloacid dehalogenase-like hydrolase BFO_1843 PF03186 BFO_1843 BFO_1844 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BFO_1844 PF07685 CobB/CobQ-like glutamine amidotransferase domain BFO_1845 PF00155 Aminotransferase class I and II BFO_1846 PF01042 Endoribonuclease L-PSP BFO_1848 PF02542 YgbB family BFO_1849 PF05496 Holliday junction DNA helicase ruvB N-terminus BFO_1849 PF12002 MgsA AAA+ ATPase C terminal BFO_1849 PF16193 BFO_1849 BFO_1851 PF13884 Chaperone of endosialidase BFO_1853 PF03534 Salmonella virulence plasmid 65kDa B protein BFO_1853 PF05593 BFO_1853 BFO_1853 PF12256 Insecticide toxin TcdB middle/N-terminal region BFO_1853 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella BFO_1871 PF14437 BFO_1871 BFO_1873 PF02517 CAAX protease self-immunity BFO_1874 PF01746 tRNA (Guanine-1)-methyltransferase BFO_1876 PF01588 Putative tRNA binding domain BFO_1876 PF03147 Ferredoxin-fold anticodon binding domain BFO_1876 PF03483 B3/4 domain BFO_1876 PF03484 tRNA synthetase B5 domain BFO_1877 PF01709 Transcriptional regulator BFO_1879 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BFO_1880 PF00588 SpoU rRNA Methylase family BFO_1881 PF14127 BFO_1881 BFO_1882 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BFO_1882 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BFO_1882 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BFO_1882 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BFO_1883 PF00829 Ribosomal prokaryotic L21 protein BFO_1884 PF01016 Ribosomal L27 protein BFO_1885 PF00877 NlpC/P60 family BFO_1886 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BFO_1886 PF02403 Seryl-tRNA synthetase N-terminal domain BFO_1887 PF00149 Calcineurin-like phosphoesterase BFO_1889 PF02661 Fic/DOC family BFO_1889 PF13412 Winged helix-turn-helix DNA-binding BFO_1890 PF13173 AAA domain BFO_1890 PF13635 BFO_1890 BFO_1892 PF01032 FecCD transport family BFO_1895 PF03993 BFO_1895 BFO_1896 PF14349 BFO_1896 BFO_1897 PF01330 RuvA N terminal domain BFO_1897 PF07499 RuvA, C-terminal domain BFO_1897 PF14520 Helix-hairpin-helix domain BFO_1899 PF01253 Translation initiation factor SUI1 BFO_1900 PF00580 UvrD/REP helicase N-terminal domain BFO_1900 PF13361 UvrD-like helicase C-terminal domain BFO_1901 PF02666 BFO_1901 BFO_1902 PF01066 CDP-alcohol phosphatidyltransferase BFO_1903 PF12833 Helix-turn-helix domain BFO_1905 PF01926 50S ribosome-binding GTPase BFO_1905 PF13167 BFO_1905 BFO_1905 PF16360 BFO_1905 BFO_1907 PF13308 YARHG domain BFO_1910 PF02368 Bacterial Ig-like domain (group 2) BFO_1911 PF04011 LemA family BFO_1912 PF09972 BFO_1912 BFO_1914 PF00149 Calcineurin-like phosphoesterase BFO_1914 PF02872 5'-nucleotidase, C-terminal domain BFO_1915 PF07787 BFO_1915 BFO_1918 PF02368 Bacterial Ig-like domain (group 2) BFO_1918 PF13004 Bacteroidetes-Associated Carbohydrate-binding Often N-terminal BFO_1918 PF13306 Leucine rich repeats (6 copies) BFO_1922 PF00072 Response regulator receiver domain BFO_1922 PF00512 His Kinase A (phospho-acceptor) domain BFO_1922 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BFO_1922 PF12833 Helix-turn-helix domain BFO_1922 PF13424 Tetratricopeptide repeat BFO_1923 PF00728 Glycosyl hydrolase family 20, catalytic domain BFO_1923 PF02838 Glycosyl hydrolase family 20, domain 2 BFO_1923 PF07691 PA14 domain BFO_1923 PF13290 BFO_1923 BFO_1924 PF00464 Serine hydroxymethyltransferase BFO_1926 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BFO_1926 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BFO_1927 PF02565 Recombination protein O C terminal BFO_1927 PF11967 Recombination protein O N terminal BFO_1930 PF00749 tRNA synthetases class I (E and Q), catalytic domain BFO_1931 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BFO_1932 PF09587 Bacterial capsule synthesis protein PGA_cap BFO_1933 PF00132 Bacterial transferase hexapeptide (six repeats) BFO_1934 PF01165 Ribosomal protein S21 BFO_1935 PF00589 Phage integrase family BFO_1935 PF02899 Phage integrase, N-terminal SAM-like domain BFO_1936 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BFO_1939 PF00009 Elongation factor Tu GTP binding domain BFO_1939 PF03143 Elongation factor Tu C-terminal domain BFO_1939 PF03144 Elongation factor Tu domain 2 BFO_1941 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BFO_1942 PF00467 KOW motif BFO_1942 PF02357 Transcription termination factor nusG BFO_1943 PF00298 Ribosomal protein L11, RNA binding domain BFO_1943 PF03946 Ribosomal protein L11, N-terminal domain BFO_1944 PF00687 Ribosomal protein L1p/L10e family BFO_1945 PF00466 Ribosomal protein L10 BFO_1946 PF00542 Ribosomal protein L7/L12 C-terminal domain BFO_1946 PF16320 BFO_1946 BFO_1947 PF00562 RNA polymerase Rpb2, domain 6 BFO_1947 PF04560 RNA polymerase Rpb2, domain 7 BFO_1947 PF04561 RNA polymerase Rpb2, domain 2 BFO_1947 PF04563 RNA polymerase beta subunit BFO_1947 PF04565 RNA polymerase Rpb2, domain 3 BFO_1947 PF10385 RNA polymerase beta subunit external 1 domain BFO_1948 PF00623 RNA polymerase Rpb1, domain 2 BFO_1948 PF04983 RNA polymerase Rpb1, domain 3 BFO_1948 PF04997 RNA polymerase Rpb1, domain 1 BFO_1948 PF04998 RNA polymerase Rpb1, domain 5 BFO_1948 PF05000 RNA polymerase Rpb1, domain 4 BFO_1949 PF05872 BFO_1949 BFO_1951 PF00425 chorismate binding enzyme BFO_1952 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BFO_1953 PF00378 Enoyl-CoA hydratase/isomerase family BFO_1954 PF13378 Enolase C-terminal domain-like BFO_1955 PF00501 AMP-binding enzyme BFO_1956 PF13701 BFO_1956 BFO_1958 PF00589 Phage integrase family BFO_1958 PF13102 Phage integrase SAM-like domain BFO_1958 PF17293 BFO_1958 BFO_1961 PF00271 Helicase conserved C-terminal domain BFO_1961 PF04851 Type III restriction enzyme, res subunit BFO_1961 PF08463 BFO_1961 BFO_1962 PF02384 N-6 DNA Methylase BFO_1962 PF12161 HsdM N-terminal domain BFO_1963 PF06250 BFO_1963 BFO_1964 PF01420 Type I restriction modification DNA specificity domain BFO_1965 PF00589 Phage integrase family BFO_1966 PF01420 Type I restriction modification DNA specificity domain BFO_1967 PF13412 Winged helix-turn-helix DNA-binding BFO_1973 PF13365 Trypsin-like peptidase domain BFO_1975 PF00326 Prolyl oligopeptidase family BFO_1976 PF01261 Xylose isomerase-like TIM barrel BFO_1978 PF00535 Glycosyl transferase family 2 BFO_1980 PF04357 BFO_1980 BFO_1981 PF01103 Surface antigen BFO_1982 PF00128 Alpha amylase, catalytic domain BFO_1982 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BFO_1984 PF13489 Methyltransferase domain BFO_1987 PF00535 Glycosyl transferase family 2 BFO_1989 PF00534 Glycosyl transferases group 1 BFO_1989 PF09314 BFO_1989 BFO_1990 PF00534 Glycosyl transferases group 1 BFO_1991 PF02590 Predicted SPOUT methyltransferase BFO_1992 PF16022 BFO_1992 BFO_1993 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BFO_1993 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BFO_1994 PF13715 BFO_1994 BFO_1995 PF00132 Bacterial transferase hexapeptide (six repeats) BFO_1996 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BFO_2000 PF02368 Bacterial Ig-like domain (group 2) BFO_2000 PF13004 Bacteroidetes-Associated Carbohydrate-binding Often N-terminal BFO_2000 PF13306 Leucine rich repeats (6 copies) BFO_2001 PF14734 Domain of unknown function (DUF4469) with IG-like fold BFO_2003 PF00570 HRDC domain BFO_2003 PF05970 BFO_2003 BFO_2003 PF13538 UvrD-like helicase C-terminal domain BFO_2006 PF02769 AIR synthase related protein, C-terminal domain BFO_2006 PF13507 CobB/CobQ-like glutamine amidotransferase domain BFO_2007 PF00512 His Kinase A (phospho-acceptor) domain BFO_2007 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BFO_2008 PF00072 Response regulator receiver domain BFO_2008 PF00486 Transcriptional regulatory protein, C terminal BFO_2009 PF16961 BFO_2009 BFO_2010 PF01863 Protein of unknown function DUF45 BFO_2011 PF08281 Sigma-70, region 4 BFO_2012 PF04773 FecR protein BFO_2012 PF16344 BFO_2012 BFO_2013 PF00593 TonB dependent receptor BFO_2013 PF07715 TonB-dependent Receptor Plug Domain BFO_2013 PF13715 BFO_2013 BFO_2014 PF07980 SusD family BFO_2014 PF14322 Starch-binding associating with outer membrane BFO_2015 PF14307 BFO_2015 BFO_2016 PF00106 short chain dehydrogenase BFO_2017 PF01972 Serine dehydrogenase proteinase BFO_2019 PF01189 NOL1/NOP2/sun family BFO_2019 PF13636 pre-rRNA processing and ribosome biogenesis BFO_2019 PF17125 BFO_2019 BFO_2020 PF02503 Polyphosphate kinase middle domain BFO_2020 PF13089 Polyphosphate kinase N-terminal domain BFO_2020 PF13090 Polyphosphate kinase C-terminal domain BFO_2021 PF00884 Sulfatase BFO_2022 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BFO_2023 PF03572 Peptidase family S41 BFO_2024 PF01264 Chorismate synthase BFO_2025 PF16118 BFO_2025 BFO_2026 PF17170 BFO_2026 BFO_2027 PF02163 Peptidase family M50 BFO_2029 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BFO_2029 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal BFO_2029 PF13288 DXP reductoisomerase C-terminal domain BFO_2030 PF01551 Peptidase family M23 BFO_2031 PF01782 RimM N-terminal domain BFO_2033 PF14123 BFO_2033 BFO_2035 PF01964 ThiC family BFO_2035 PF13667 ThiC-associated domain BFO_2036 PF00575 S1 RNA binding domain BFO_2036 PF09371 Tex-like protein N-terminal domain BFO_2036 PF12836 Helix-hairpin-helix motif BFO_2036 PF16921 BFO_2036 BFO_2039 PF01263 Aldose 1-epimerase BFO_2040 PF07690 Major Facilitator Superfamily BFO_2041 PF00288 GHMP kinases N terminal domain BFO_2041 PF08544 GHMP kinases C terminal BFO_2041 PF10509 Galactokinase galactose-binding signature BFO_2042 PF09471 IgA Peptidase M64 BFO_2042 PF16217 BFO_2042 BFO_2043 PF00005 ABC transporter BFO_2043 PF12848 ABC transporter BFO_2043 PF16326 BFO_2043 BFO_2044 PF00478 IMP dehydrogenase / GMP reductase domain BFO_2045 PF02421 Ferrous iron transport protein B BFO_2045 PF04023 FeoA domain BFO_2045 PF07664 BFO_2045 BFO_2045 PF07670 Nucleoside recognition BFO_2047 PF06580 BFO_2047 BFO_2048 PF00072 Response regulator receiver domain BFO_2048 PF04397 LytTr DNA-binding domain BFO_2049 PF12760 Transposase zinc-ribbon domain BFO_2049 PF12762 BFO_2049 BFO_2059 PF00294 pfkB family carbohydrate kinase BFO_2060 PF08843 Nucleotidyl transferase of unknown function (DUF1814) BFO_2061 PF09407 Protein of unknown function (DUF2005) BFO_2065 PF08282 haloacid dehalogenase-like hydrolase BFO_2066 PF12801 BFO_2066 BFO_2066 PF12838 4Fe-4S dicluster domain BFO_2067 PF00248 Aldo/keto reductase family BFO_2068 PF00113 Enolase, C-terminal TIM barrel domain BFO_2068 PF03952 Enolase, N-terminal domain BFO_2069 PF09633 Protein of unknown function (DUF2023) BFO_2070 PF00258 Flavodoxin BFO_2072 PF09919 BFO_2072 BFO_2073 PF01618 BFO_2073 BFO_2075 PF02514 BFO_2075 BFO_2076 PF00593 TonB dependent receptor BFO_2076 PF07715 TonB-dependent Receptor Plug Domain BFO_2076 PF13715 BFO_2076 BFO_2077 PF00593 TonB dependent receptor BFO_2077 PF07715 TonB-dependent Receptor Plug Domain BFO_2077 PF13715 BFO_2077 BFO_2078 PF14064 HmuY protein BFO_2081 PF00317 Ribonucleotide reductase, all-alpha domain BFO_2081 PF02867 Ribonucleotide reductase, barrel domain BFO_2081 PF03477 ATP cone domain BFO_2082 PF00268 Ribonucleotide reductase, small chain BFO_2083 PF07602 BFO_2083 BFO_2083 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) BFO_2085 PF01609 Transposase DDE domain BFO_2085 PF05598 BFO_2085 BFO_2086 PF09697 BFO_2086 BFO_2088 PF09697 BFO_2088 BFO_2090 PF09697 BFO_2090 BFO_2091 PF13620 Carboxypeptidase regulatory-like domain BFO_2092 PF07075 Protein of unknown function (DUF1343) BFO_2094 PF00572 Ribosomal protein L13 BFO_2095 PF00380 Ribosomal protein S9/S16 BFO_2096 PF00318 Ribosomal protein S2 BFO_2097 PF00889 Elongation factor TS BFO_2098 PF00005 ABC transporter BFO_2100 PF16149 BFO_2100 BFO_2102 PF16357 BFO_2102 BFO_2103 PF06713 BFO_2103 BFO_2106 PF14322 Starch-binding associating with outer membrane BFO_2107 PF00593 TonB dependent receptor BFO_2107 PF07715 TonB-dependent Receptor Plug Domain BFO_2107 PF13715 BFO_2107 BFO_2112 PF02142 MGS-like domain BFO_2112 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BFO_2112 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BFO_2116 PF00999 Sodium/hydrogen exchanger family BFO_2116 PF02080 TrkA-C domain BFO_2118 PF01256 Carbohydrate kinase BFO_2118 PF03853 YjeF-related protein N-terminus BFO_2120 PF10771 Protein of unknown function (DUF2582) BFO_2122 PF05164 Cell division protein ZapA BFO_2123 PF00013 KH domain BFO_2123 PF01966 HD domain BFO_2123 PF12072 BFO_2123 BFO_2124 PF00005 ABC transporter BFO_2124 PF12848 ABC transporter BFO_2125 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BFO_2127 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BFO_2128 PF16363 BFO_2128 BFO_2129 PF02132 RecR protein BFO_2129 PF13662 Toprim domain BFO_2130 PF00535 Glycosyl transferase family 2 BFO_2131 PF13302 Acetyltransferase (GNAT) domain BFO_2133 PF01555 DNA methylase BFO_2134 PF09195 Restriction endonuclease BglII BFO_2136 PF03167 Uracil DNA glycosylase superfamily BFO_2138 PF01966 HD domain BFO_2140 PF07075 Protein of unknown function (DUF1343) BFO_2141 PF00111 2Fe-2S iron-sulfur cluster binding domain BFO_2141 PF00175 Oxidoreductase NAD-binding domain BFO_2141 PF00970 Oxidoreductase FAD-binding domain BFO_2142 PF02508 BFO_2142 BFO_2143 PF02508 BFO_2143 BFO_2144 PF04205 FMN-binding domain BFO_2145 PF03116 BFO_2145 BFO_2146 PF05896 BFO_2146 BFO_2146 PF11973 BFO_2146 BFO_2148 PF01551 Peptidase family M23 BFO_2149 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BFO_2149 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BFO_2149 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BFO_2149 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BFO_2150 PF14489 QueF-like protein BFO_2151 PF01018 GTP1/OBG BFO_2151 PF01926 50S ribosome-binding GTPase BFO_2152 PF00406 Adenylate kinase BFO_2153 PF00156 Phosphoribosyl transferase domain BFO_2154 PF13304 AAA domain BFO_2155 PF14103 BFO_2155 BFO_2156 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BFO_2157 PF10101 BFO_2157 BFO_2159 PF00535 Glycosyl transferase family 2 BFO_2161 PF00474 Sodium:solute symporter family BFO_2162 PF06123 BFO_2162 BFO_2163 PF13601 Winged helix DNA-binding domain BFO_2166 PF13701 BFO_2166 BFO_2171 PF13905 Thioredoxin-like BFO_2171 PF14289 BFO_2171 BFO_2172 PF00849 RNA pseudouridylate synthase BFO_2173 PF00144 Beta-lactamase BFO_2174 PF13561 Enoyl-(Acyl carrier protein) reductase BFO_2175 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BFO_2175 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BFO_2176 PF00440 Bacterial regulatory proteins, tetR family BFO_2182 PF00933 Glycosyl hydrolase family 3 N terminal domain BFO_2182 PF01915 Glycosyl hydrolase family 3 C-terminal domain BFO_2182 PF14310 Fibronectin type III-like domain BFO_2183 PF00691 OmpA family BFO_2183 PF13488 BFO_2183 BFO_2189 PF00004 ATPase family associated with various cellular activities (AAA) BFO_2189 PF02861 Clp amino terminal domain BFO_2189 PF07724 AAA domain (Cdc48 subfamily) BFO_2189 PF10431 C-terminal, D2-small domain, of ClpB protein BFO_2190 PF00814 Glycoprotease family BFO_2191 PF02253 Phospholipase A1 BFO_2194 PF13173 AAA domain BFO_2194 PF13635 BFO_2194 BFO_2202 PF00701 Dihydrodipicolinate synthetase family BFO_2203 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) BFO_2204 PF07690 Major Facilitator Superfamily BFO_2205 PF00593 TonB dependent receptor BFO_2205 PF07715 TonB-dependent Receptor Plug Domain BFO_2205 PF13715 BFO_2205 BFO_2206 PF07980 SusD family BFO_2206 PF14322 Starch-binding associating with outer membrane BFO_2207 PF13088 BNR repeat-like domain BFO_2207 PF14873 N-terminal domain of BNR-repeat neuraminidase BFO_2208 PF00728 Glycosyl hydrolase family 20, catalytic domain BFO_2208 PF02838 Glycosyl hydrolase family 20, domain 2 BFO_2209 PF03629 Domain of unknown function (DUF303) BFO_2209 PF13472 GDSL-like Lipase/Acylhydrolase family BFO_2210 PF01344 Kelch motif BFO_2211 PF03929 BFO_2211 BFO_2213 PF00593 TonB dependent receptor BFO_2213 PF07715 TonB-dependent Receptor Plug Domain BFO_2214 PF06180 Cobalt chelatase (CbiK) BFO_2215 PF03929 BFO_2215 BFO_2217 PF07715 TonB-dependent Receptor Plug Domain BFO_2217 PF13715 BFO_2217 BFO_2219 PF02424 ApbE family BFO_2222 PF00149 Calcineurin-like phosphoesterase BFO_2224 PF01966 HD domain BFO_2224 PF07697 BFO_2224 BFO_2224 PF07698 BFO_2224 BFO_2227 PF12682 Flavodoxin BFO_2232 PF06250 BFO_2232 BFO_2235 PF14055 BFO_2235 BFO_2236 PF17170 BFO_2236 BFO_2237 PF04932 BFO_2237 BFO_2239 PF13715 BFO_2239 BFO_2242 PF13715 BFO_2242 BFO_2244 PF04055 Radical SAM superfamily BFO_2244 PF13353 4Fe-4S single cluster domain BFO_2246 PF00196 Bacterial regulatory proteins, luxR family BFO_2247 PF13715 BFO_2247 BFO_2247 PF14905 Outer membrane protein beta-barrel family BFO_2248 PF16363 BFO_2248 BFO_2252 PF09907 BFO_2252 BFO_2253 PF01381 Helix-turn-helix BFO_2254 PF00294 pfkB family carbohydrate kinase BFO_2256 PF03051 Peptidase C1-like family BFO_2258 PF12849 PBP superfamily domain BFO_2259 PF00485 Phosphoribulokinase / Uridine kinase family BFO_2260 PF00440 Bacterial regulatory proteins, tetR family BFO_2261 PF02321 Outer membrane efflux protein BFO_2262 PF13437 HlyD family secretion protein BFO_2263 PF00005 ABC transporter BFO_2264 PF00005 ABC transporter BFO_2265 PF12698 ABC-2 family transporter protein BFO_2266 PF12698 ABC-2 family transporter protein BFO_2267 PF03483 B3/4 domain BFO_2268 PF16411 BFO_2268 BFO_2268 PF17142 BFO_2268 BFO_2269 PF14292 BFO_2269 BFO_2269 PF16411 BFO_2269 BFO_2270 PF07980 SusD family BFO_2270 PF14322 Starch-binding associating with outer membrane BFO_2271 PF00593 TonB dependent receptor BFO_2271 PF07715 TonB-dependent Receptor Plug Domain BFO_2271 PF13715 BFO_2271 BFO_2272 PF10566 Glycoside hydrolase 97 BFO_2272 PF14508 Glycosyl-hydrolase 97 N-terminal BFO_2272 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation BFO_2273 PF08241 Methyltransferase domain BFO_2274 PF01702 Queuine tRNA-ribosyltransferase BFO_2276 PF03739 BFO_2276 BFO_2277 PF13231 BFO_2277 BFO_2278 PF09719 Putative redox-active protein (C_GCAxxG_C_C) BFO_2279 PF00301 Rubredoxin BFO_2280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BFO_2280 PF03466 LysR substrate binding domain BFO_2281 PF00210 Ferritin-like domain BFO_2282 PF00924 Mechanosensitive ion channel BFO_2283 PF00899 ThiF family BFO_2284 PF01219 Prokaryotic diacylglycerol kinase BFO_2285 PF07470 Glycosyl Hydrolase Family 88 BFO_2286 PF00593 TonB dependent receptor BFO_2286 PF07715 TonB-dependent Receptor Plug Domain BFO_2286 PF13715 BFO_2286 BFO_2287 PF07980 SusD family BFO_2287 PF14322 Starch-binding associating with outer membrane BFO_2288 PF04962 KduI/IolB family BFO_2289 PF16153 BFO_2289 BFO_2290 PF00884 Sulfatase BFO_2291 PF07940 Heparinase II/III-like protein BFO_2292 PF00294 pfkB family carbohydrate kinase BFO_2293 PF13561 Enoyl-(Acyl carrier protein) reductase BFO_2294 PF01081 KDPG and KHG aldolase BFO_2295 PF07690 Major Facilitator Superfamily BFO_2298 PF09112 Peptide-N-glycosidase F, N terminal BFO_2298 PF09113 Peptide-N-glycosidase F, C terminal BFO_2299 PF02687 BFO_2299 BFO_2299 PF12704 MacB-like periplasmic core domain BFO_2300 PF16576 BFO_2300 BFO_2302 PF04932 BFO_2302 BFO_2302 PF14559 Tetratricopeptide repeat BFO_2305 PF01944 BFO_2305 BFO_2307 PF00754 F5/8 type C domain BFO_2313 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BFO_2314 PF02609 Exonuclease VII small subunit BFO_2315 PF02601 BFO_2315 BFO_2315 PF13742 BFO_2315 BFO_2316 PF00082 Subtilase family BFO_2318 PF03590 Aspartate-ammonia ligase BFO_2319 PF00120 Glutamine synthetase, catalytic domain BFO_2319 PF12437 Glutamine synthetase type III N terminal BFO_2320 PF00795 Carbon-nitrogen hydrolase BFO_2320 PF02540 NAD synthase BFO_2321 PF01734 Patatin-like phospholipase BFO_2323 PF02677 BFO_2323 BFO_2324 PF04371 Porphyromonas-type peptidyl-arginine deiminase BFO_2325 PF00795 Carbon-nitrogen hydrolase BFO_2326 PF04542 Sigma-70 region 2 BFO_2326 PF08281 Sigma-70, region 4 BFO_2328 PF01881 CRISPR associated protein Cas6 BFO_2329 PF07929 Plasmid pRiA4b ORF-3-like protein BFO_2332 PF01905 CRISPR-associated negative auto-regulator DevR/Csa2 BFO_2333 PF00270 DEAD/DEAH box helicase BFO_2333 PF00271 Helicase conserved C-terminal domain BFO_2335 PF02661 Fic/DOC family BFO_2335 PF13412 Winged helix-turn-helix DNA-binding BFO_2336 PF01930 Domain of unknown function DUF83 BFO_2337 PF00990 GGDEF domain BFO_2338 PF03750 BFO_2338 BFO_2339 PF03787 RAMP superfamily BFO_2341 PF03787 RAMP superfamily BFO_2342 PF09455 CRISPR-associated (Cas) DxTHG family BFO_2343 PF01867 CRISPR associated protein Cas1 BFO_2344 PF09827 CRISPR associated protein Cas2 BFO_2494 PF00210 Ferritin-like domain BFO_2495 PF03030 Inorganic H+ pyrophosphatase BFO_2497 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BFO_2498 PF00580 UvrD/REP helicase N-terminal domain BFO_2498 PF13361 UvrD-like helicase C-terminal domain BFO_2499 PF00216 Bacterial DNA-binding protein BFO_2500 PF02152 Dihydroneopterin aldolase BFO_2501 PF00686 Starch binding domain BFO_2501 PF02446 4-alpha-glucanotransferase BFO_2502 PF04519 BFO_2502 BFO_2503 PF02867 Ribonucleotide reductase, barrel domain BFO_2504 PF00037 4Fe-4S binding domain BFO_2505 PF01148 Cytidylyltransferase family BFO_2506 PF13568 Outer membrane protein beta-barrel domain BFO_2507 PF00004 ATPase family associated with various cellular activities (AAA) BFO_2507 PF01434 Peptidase family M41 BFO_2508 PF02410 Oligomerisation domain BFO_2511 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) BFO_2513 PF00593 TonB dependent receptor BFO_2513 PF07715 TonB-dependent Receptor Plug Domain BFO_2513 PF13715 BFO_2513 BFO_2514 PF12771 Starch-binding associating with outer membrane BFO_2515 PF12760 Transposase zinc-ribbon domain BFO_2515 PF12762 BFO_2515 BFO_2517 PF12741 Susd and RagB outer membrane lipoprotein BFO_2517 PF12771 Starch-binding associating with outer membrane BFO_2519 PF03060 Nitronate monooxygenase BFO_2520 PF07690 Major Facilitator Superfamily BFO_2521 PF08245 Mur ligase middle domain BFO_2522 PF02562 PhoH-like protein BFO_2522 PF13638 PIN domain BFO_2523 PF06508 Queuosine biosynthesis protein QueC BFO_2524 PF01545 Cation efflux family BFO_2524 PF16916 BFO_2524 BFO_2525 PF02592 BFO_2525 BFO_2526 PF05336 Domain of unknown function (DUF718) BFO_2532 PF00712 DNA polymerase III beta subunit, N-terminal domain BFO_2532 PF02767 DNA polymerase III beta subunit, central domain BFO_2532 PF02768 DNA polymerase III beta subunit, C-terminal domain BFO_2533 PF00929 Exonuclease BFO_2534 PF02441 Flavoprotein BFO_2534 PF04127 DNA / pantothenate metabolism flavoprotein BFO_2535 PF16119 BFO_2535 BFO_2536 PF02463 RecF/RecN/SMC N terminal domain BFO_2537 PF00588 SpoU rRNA Methylase family BFO_2537 PF08032 RNA 2'-O ribose methyltransferase substrate binding BFO_2538 PF00453 Ribosomal protein L20 BFO_2539 PF01632 Ribosomal protein L35 BFO_2540 PF00707 Translation initiation factor IF-3, C-terminal domain BFO_2540 PF05198 Translation initiation factor IF-3, N-terminal domain BFO_2541 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BFO_2541 PF02824 TGS domain BFO_2541 PF03129 Anticodon binding domain BFO_2541 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BFO_2543 PF01546 Peptidase family M20/M25/M40 BFO_2543 PF07687 Peptidase dimerisation domain BFO_2546 PF03938 Outer membrane protein (OmpH-like) BFO_2547 PF01979 Amidohydrolase family BFO_2548 PF00465 Iron-containing alcohol dehydrogenase BFO_2549 PF00027 Cyclic nucleotide-binding domain BFO_2549 PF13545 Crp-like helix-turn-helix domain BFO_2552 PF11276 BFO_2552 BFO_2553 PF00703 Glycosyl hydrolases family 2 BFO_2553 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BFO_2553 PF02837 Glycosyl hydrolases family 2, sugar binding domain BFO_2553 PF16355 BFO_2553 BFO_2554 PF13419 Haloacid dehalogenase-like hydrolase BFO_2556 PF10026 BFO_2556 BFO_2557 PF13177 DNA polymerase III, delta subunit BFO_2558 PF02219 Methylenetetrahydrofolate reductase BFO_2560 PF01554 MatE BFO_2562 PF00593 TonB dependent receptor BFO_2562 PF07715 TonB-dependent Receptor Plug Domain BFO_2562 PF13715 BFO_2562 BFO_2563 PF07980 SusD family BFO_2563 PF14322 Starch-binding associating with outer membrane BFO_2565 PF13579 Glycosyl transferase 4-like domain BFO_2566 PF02350 UDP-N-acetylglucosamine 2-epimerase BFO_2568 PF13480 Acetyltransferase (GNAT) domain BFO_2569 PF00154 recA bacterial DNA recombination protein BFO_2570 PF00578 AhpC/TSA family BFO_2571 PF03435 Saccharopine dehydrogenase BFO_2571 PF16653 BFO_2571 BFO_2572 PF03548 Outer membrane lipoprotein carrier protein LolA BFO_2574 PF07977 FabA-like domain BFO_2575 PF00535 Glycosyl transferase family 2 BFO_2576 PF01553 Acyltransferase BFO_2576 PF03176 MMPL family BFO_2578 PF14021 BFO_2578 BFO_2578 PF14107 BFO_2578 BFO_2581 PF14107 BFO_2581 BFO_2582 PF15565 BFO_2582 BFO_2586 PF14568 SMI1-KNR4 cell-wall BFO_2589 PF05593 BFO_2589 BFO_2589 PF14412 BFO_2589 BFO_2591 PF14412 BFO_2591 BFO_2596 PF12706 Beta-lactamase superfamily domain BFO_2597 PF00929 Exonuclease BFO_2600 PF00593 TonB dependent receptor BFO_2600 PF07715 TonB-dependent Receptor Plug Domain BFO_2600 PF13715 BFO_2600 BFO_2601 PF07980 SusD family BFO_2601 PF14322 Starch-binding associating with outer membrane BFO_2603 PF07676 WD40-like Beta Propeller Repeat BFO_2605 PF00593 TonB dependent receptor BFO_2605 PF07715 TonB-dependent Receptor Plug Domain BFO_2606 PF00842 Alanine racemase, C-terminal domain BFO_2606 PF01168 Alanine racemase, N-terminal domain BFO_2606 PF01225 Mur ligase family, catalytic domain BFO_2606 PF08245 Mur ligase middle domain BFO_2607 PF04973 BFO_2607 BFO_2608 PF08885 BFO_2608 BFO_2610 PF01476 LysM domain BFO_2610 PF01551 Peptidase family M23 BFO_2611 PF07659 BFO_2611 BFO_2613 PF00121 Triosephosphate isomerase BFO_2614 PF05036 Sporulation related domain BFO_2615 PF01227 GTP cyclohydrolase I BFO_2616 PF01300 Telomere recombination BFO_2618 PF04542 Sigma-70 region 2 BFO_2618 PF08281 Sigma-70, region 4 BFO_2619 PF03577 BFO_2619 BFO_2620 PF13505 Outer membrane protein beta-barrel domain BFO_2621 PF00593 TonB dependent receptor BFO_2621 PF07715 TonB-dependent Receptor Plug Domain BFO_2621 PF13715 BFO_2621 BFO_2624 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BFO_2624 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BFO_2625 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BFO_2625 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BFO_2626 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BFO_2626 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BFO_2627 PF01841 Transglutaminase-like superfamily BFO_2628 PF01261 Xylose isomerase-like TIM barrel BFO_2629 PF13192 Thioredoxin domain BFO_2630 PF08984 Domain of unknown function (DUF1858) BFO_2630 PF10006 BFO_2630 BFO_2632 PF01814 Hemerythrin HHE cation binding domain BFO_2632 PF04282 BFO_2632 BFO_2632 PF13596 PAS domain BFO_2633 PF07883 Cupin domain BFO_2634 PF07980 SusD family BFO_2634 PF14322 Starch-binding associating with outer membrane BFO_2635 PF00593 TonB dependent receptor BFO_2635 PF07715 TonB-dependent Receptor Plug Domain BFO_2635 PF13715 BFO_2635 BFO_2638 PF14898 BFO_2638 BFO_2639 PF00593 TonB dependent receptor BFO_2639 PF07715 TonB-dependent Receptor Plug Domain BFO_2640 PF07676 WD40-like Beta Propeller Repeat BFO_2642 PF01979 Amidohydrolase family BFO_2643 PF00535 Glycosyl transferase family 2 BFO_2644 PF02638 BFO_2644 BFO_2645 PF01370 NAD dependent epimerase/dehydratase family BFO_2647 PF13568 Outer membrane protein beta-barrel domain BFO_2648 PF01476 LysM domain BFO_2652 PF01464 Transglycosylase SLT domain BFO_2655 PF01205 Uncharacterized protein family UPF0029 BFO_2658 PF00557 Metallopeptidase family M24 BFO_2658 PF01321 Creatinase/Prolidase N-terminal domain BFO_2659 PF00245 Alkaline phosphatase BFO_2661 PF05572 Pregnancy-associated plasma protein-A BFO_2665 PF00082 Subtilase family BFO_2675 PF01650 Peptidase C13 family BFO_2679 PF13365 Trypsin-like peptidase domain BFO_2686 PF00703 Glycosyl hydrolases family 2 BFO_2686 PF00754 F5/8 type C domain BFO_2686 PF02837 Glycosyl hydrolases family 2, sugar binding domain BFO_2688 PF02357 Transcription termination factor nusG BFO_2689 PF02638 BFO_2689 BFO_2690 PF03009 Glycerophosphoryl diester phosphodiesterase family BFO_2691 PF07992 Pyridine nucleotide-disulphide oxidoreductase BFO_2692 PF16584 BFO_2692 BFO_2693 PF01580 FtsK/SpoIIIE family BFO_2693 PF09397 Ftsk gamma domain BFO_2693 PF13491 BFO_2693 BFO_2694 PF00152 tRNA synthetases class II (D, K and N) BFO_2694 PF01336 OB-fold nucleic acid binding domain BFO_2694 PF02938 GAD domain BFO_2695 PF01784 NIF3 (NGG1p interacting factor 3) BFO_2696 PF02591 Putative zinc ribbon domain BFO_2697 PF01171 PP-loop family BFO_2697 PF11734 TilS substrate C-terminal domain BFO_2698 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BFO_2698 PF07497 Rho termination factor, RNA-binding domain BFO_2698 PF07498 Rho termination factor, N-terminal domain BFO_2700 PF00578 AhpC/TSA family BFO_2700 PF10417 C-terminal domain of 1-Cys peroxiredoxin BFO_2701 PF01814 Hemerythrin HHE cation binding domain BFO_2702 PF00196 Bacterial regulatory proteins, luxR family BFO_2705 PF06738 BFO_2705 BFO_2706 PF12821 BFO_2706 BFO_2708 PF12762 BFO_2708 BFO_2709 PF11551 Outer membrane protein Omp28 BFO_2711 PF03724 META domain BFO_2712 PF00364 Biotin-requiring enzyme BFO_2712 PF00682 HMGL-like BFO_2712 PF02436 Conserved carboxylase domain BFO_2713 PF02652 BFO_2713 BFO_2714 PF02589 Uncharacterised ACR, YkgG family COG1556 BFO_2715 PF02589 Uncharacterised ACR, YkgG family COG1556 BFO_2715 PF11870 BFO_2715 BFO_2715 PF13183 4Fe-4S dicluster domain BFO_2716 PF02754 BFO_2716 BFO_2717 PF13372 Alginate export BFO_2719 PF00293 NUDIX domain BFO_2721 PF13525 Outer membrane lipoprotein BFO_2722 PF01192 RNA polymerase Rpb6 BFO_2723 PF14126 BFO_2723 BFO_2724 PF00912 Transglycosylase BFO_2725 PF03099 Biotin/lipoate A/B protein ligase family BFO_2726 PF14109 BFO_2726 BFO_2727 PF04468 BFO_2727 BFO_2728 PF00155 Aminotransferase class I and II BFO_2729 PF05175 Methyltransferase small domain BFO_2731 PF01546 Peptidase family M20/M25/M40 BFO_2731 PF07687 Peptidase dimerisation domain BFO_2732 PF01979 Amidohydrolase family BFO_2733 PF13635 BFO_2733 BFO_2737 PF01120 Alpha-L-fucosidase BFO_2738 PF01619 Proline dehydrogenase BFO_2743 PF00593 TonB dependent receptor BFO_2743 PF07715 TonB-dependent Receptor Plug Domain BFO_2743 PF13715 BFO_2743 BFO_2744 PF07980 SusD family BFO_2744 PF14322 Starch-binding associating with outer membrane BFO_2745 PF05036 Sporulation related domain BFO_2746 PF01642 Methylmalonyl-CoA mutase BFO_2747 PF01642 Methylmalonyl-CoA mutase BFO_2747 PF02310 B12 binding domain BFO_2749 PF00005 ABC transporter BFO_2749 PF12848 ABC transporter BFO_2751 PF02348 Cytidylyltransferase BFO_2752 PF02096 60Kd inner membrane protein BFO_2752 PF14849 YidC periplasmic domain BFO_2753 PF00117 Glutamine amidotransferase class-I BFO_2753 PF06418 CTP synthase N-terminus BFO_2754 PF00488 MutS domain V BFO_2754 PF05192 MutS domain III BFO_2755 PF11276 BFO_2755 BFO_2757 PF04246 BFO_2757 BFO_2758 PF00037 4Fe-4S binding domain BFO_2758 PF04060 Putative Fe-S cluster BFO_2758 PF12838 4Fe-4S dicluster domain BFO_2759 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BFO_2759 PF10531 SLBB domain BFO_2759 PF13237 4Fe-4S dicluster domain BFO_2759 PF13375 RnfC Barrel sandwich hybrid domain BFO_2760 PF03116 BFO_2760 BFO_2761 PF04205 FMN-binding domain BFO_2762 PF02508 BFO_2762 BFO_2763 PF02508 BFO_2763 BFO_2765 PF13146 BFO_2765 BFO_2768 PF01610 BFO_2768 BFO_2768 PF13542 BFO_2768 BFO_2770 PF01694 Rhomboid family BFO_2771 PF01694 Rhomboid family BFO_2772 PF03372 Endonuclease/Exonuclease/phosphatase family BFO_2773 PF00860 Permease family BFO_2774 PF16412 BFO_2774 BFO_2775 PF00722 Glycosyl hydrolases family 16 BFO_2777 PF00884 Sulfatase BFO_2777 PF16347 BFO_2777 BFO_2779 PF01923 Cobalamin adenosyltransferase BFO_2780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BFO_2780 PF02570 Precorrin-8X methylmutase BFO_2781 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BFO_2782 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BFO_2782 PF01890 Cobalamin synthesis G C-terminus BFO_2782 PF11760 Cobalamin synthesis G N-terminal BFO_2782 PF11761 BFO_2782 BFO_2783 PF01888 CbiD BFO_2783 PF02571 BFO_2783 BFO_2785 PF13508 Acetyltransferase (GNAT) domain BFO_2790 PF00873 AcrB/AcrD/AcrF family BFO_2791 PF16576 BFO_2791 BFO_2792 PF02321 Outer membrane efflux protein BFO_2793 PF12833 Helix-turn-helix domain BFO_2795 PF00854 POT family BFO_2796 PF16115 BFO_2796 BFO_2797 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BFO_2797 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BFO_2798 PF11950 BFO_2798 BFO_2799 PF04773 FecR protein BFO_2799 PF16344 BFO_2799 BFO_2801 PF00593 TonB dependent receptor BFO_2801 PF07715 TonB-dependent Receptor Plug Domain BFO_2801 PF13715 BFO_2801 BFO_2802 PF07980 SusD family BFO_2802 PF14322 Starch-binding associating with outer membrane BFO_2803 PF02055 O-Glycosyl hydrolase family 30 BFO_2805 PF00293 NUDIX domain BFO_2806 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BFO_2806 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BFO_2808 PF00083 Sugar (and other) transporter BFO_2812 PF00593 TonB dependent receptor BFO_2812 PF07715 TonB-dependent Receptor Plug Domain BFO_2812 PF13715 BFO_2812 BFO_2813 PF07980 SusD family BFO_2813 PF14322 Starch-binding associating with outer membrane BFO_2814 PF16410 BFO_2814 BFO_2815 PF02638 BFO_2815 BFO_2815 PF16373 BFO_2815 BFO_2816 PF00149 Calcineurin-like phosphoesterase BFO_2816 PF16370 BFO_2816 BFO_2816 PF16371 BFO_2816 BFO_2818 PF01640 Peptidase C10 family BFO_2818 PF13734 Spi protease inhibitor BFO_2823 PF05534 BFO_2823 BFO_2826 PF00696 Amino acid kinase family BFO_2828 PF00288 GHMP kinases N terminal domain BFO_2828 PF08544 GHMP kinases C terminal BFO_2829 PF00270 DEAD/DEAH box helicase BFO_2829 PF00271 Helicase conserved C-terminal domain BFO_2830 PF00497 Bacterial extracellular solute-binding proteins, family 3 BFO_2831 PF14121 BFO_2831 BFO_2832 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BFO_2833 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BFO_2835 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BFO_2835 PF17147 BFO_2835 BFO_2836 PF12838 4Fe-4S dicluster domain BFO_2837 PF10825 BFO_2837 BFO_2838 PF04505 BFO_2838 BFO_2838 PF14237 BFO_2838 BFO_2839 PF04018 BFO_2839 BFO_2840 PF13432 Tetratricopeptide repeat BFO_2841 PF00749 tRNA synthetases class I (E and Q), catalytic domain BFO_2841 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BFO_2842 PF00586 AIR synthase related protein, N-terminal domain BFO_2842 PF02769 AIR synthase related protein, C-terminal domain BFO_2844 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BFO_2845 PF01343 Peptidase family S49 BFO_2848 PF01554 MatE BFO_2851 PF00326 Prolyl oligopeptidase family BFO_2851 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BFO_2853 PF00072 Response regulator receiver domain BFO_2853 PF00512 His Kinase A (phospho-acceptor) domain BFO_2853 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BFO_2853 PF12833 Helix-turn-helix domain BFO_2855 PF13701 BFO_2855 BFO_2860 PF00041 Fibronectin type III domain BFO_2860 PF02368 Bacterial Ig-like domain (group 2) BFO_2860 PF13004 Bacteroidetes-Associated Carbohydrate-binding Often N-terminal BFO_2861 PF02368 Bacterial Ig-like domain (group 2) BFO_2862 PF00041 Fibronectin type III domain BFO_2862 PF02368 Bacterial Ig-like domain (group 2) BFO_2864 PF02368 Bacterial Ig-like domain (group 2) BFO_2865 PF00041 Fibronectin type III domain BFO_2865 PF02368 Bacterial Ig-like domain (group 2) BFO_2867 PF02347 Glycine cleavage system P-protein BFO_2868 PF00753 Metallo-beta-lactamase superfamily BFO_2869 PF02527 rRNA small subunit methyltransferase G BFO_2870 PF11738 Protein of unknown function (DUF3298) BFO_2872 PF00521 DNA gyrase/topoisomerase IV, subunit A BFO_2872 PF03989 DNA gyrase C-terminal domain, beta-propeller BFO_2873 PF13432 Tetratricopeptide repeat BFO_2874 PF00582 Universal stress protein family BFO_2874 PF09413 Domain of unknown function (DUF2007) BFO_2876 PF01569 PAP2 superfamily BFO_2877 PF08239 Bacterial SH3 domain BFO_2877 PF13432 Tetratricopeptide repeat BFO_2878 PF13584 BFO_2878 BFO_2879 PF00515 Tetratricopeptide repeat BFO_2879 PF13414 TPR repeat BFO_2880 PF00092 von Willebrand factor type A domain BFO_2880 PF07584 BFO_2880 BFO_2881 PF00092 von Willebrand factor type A domain BFO_2881 PF07584 BFO_2881 BFO_2883 PF01882 BFO_2883 BFO_2884 PF07726 ATPase family associated with various cellular activities (AAA) BFO_2885 PF00216 Bacterial DNA-binding protein BFO_2886 PF00216 Bacterial DNA-binding protein BFO_2887 PF00919 Uncharacterized protein family UPF0004 BFO_2887 PF04055 Radical SAM superfamily BFO_2888 PF00448 SRP54-type protein, GTPase domain BFO_2888 PF02881 SRP54-type protein, helical bundle domain BFO_2889 PF17170 BFO_2889 BFO_2893 PF02618 YceG-like family BFO_2894 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BFO_2894 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BFO_2895 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BFO_2898 PF06144 DNA polymerase III, delta subunit BFO_2899 PF01048 Phosphorylase superfamily BFO_2900 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) BFO_2901 PF06889 BFO_2901 BFO_2902 PF07859 alpha/beta hydrolase fold BFO_2903 PF10150 Ribonuclease E/G family BFO_2904 PF00216 Bacterial DNA-binding protein BFO_2906 PF00633 Helix-hairpin-helix motif BFO_2906 PF00730 HhH-GPD superfamily base excision DNA repair protein BFO_2906 PF14815 NUDIX domain BFO_2907 PF00436 Single-strand binding protein family BFO_2908 PF00571 CBS domain BFO_2908 PF01595 BFO_2908 BFO_2908 PF03471 Transporter associated domain BFO_2910 PF01648 4'-phosphopantetheinyl transferase superfamily BFO_2912 PF02368 Bacterial Ig-like domain (group 2) BFO_2913 PF01261 Xylose isomerase-like TIM barrel BFO_2914 PF07980 SusD family BFO_2914 PF14322 Starch-binding associating with outer membrane BFO_2915 PF00593 TonB dependent receptor BFO_2915 PF07715 TonB-dependent Receptor Plug Domain BFO_2915 PF13715 BFO_2915 BFO_2916 PF04773 FecR protein BFO_2916 PF16344 BFO_2916 BFO_2917 PF04542 Sigma-70 region 2 BFO_2917 PF08281 Sigma-70, region 4 BFO_2919 PF01370 NAD dependent epimerase/dehydratase family BFO_2920 PF01569 PAP2 superfamily BFO_2922 PF01569 PAP2 superfamily BFO_2923 PF01862 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) BFO_2928 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BFO_2929 PF01571 Aminomethyltransferase folate-binding domain BFO_2929 PF08669 Glycine cleavage T-protein C-terminal barrel domain BFO_2930 PF01546 Peptidase family M20/M25/M40 BFO_2930 PF07687 Peptidase dimerisation domain BFO_2932 PF00535 Glycosyl transferase family 2 BFO_2934 PF01252 BFO_2934 BFO_2935 PF01258 Prokaryotic dksA/traR C4-type zinc finger BFO_2936 PF00133 tRNA synthetases class I (I, L, M and V) BFO_2936 PF08264 Anticodon-binding domain of tRNA BFO_2937 PF02661 Fic/DOC family BFO_2937 PF13776 BFO_2937 BFO_2938 PF03641 Possible lysine decarboxylase BFO_2939 PF01066 CDP-alcohol phosphatidyltransferase BFO_2940 PF11832 BFO_2940 BFO_2941 PF17116 BFO_2941 BFO_2943 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BFO_2943 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BFO_2943 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BFO_2944 PF00483 Nucleotidyl transferase BFO_2947 PF07971 Glycosyl hydrolase family 92 BFO_2948 PF08501 Shikimate dehydrogenase substrate binding domain BFO_2949 PF01209 ubiE/COQ5 methyltransferase family BFO_2950 PF01259 SAICAR synthetase BFO_2951 PF02562 PhoH-like protein BFO_2955 PF00557 Metallopeptidase family M24 BFO_2955 PF05195 Aminopeptidase P, N-terminal domain BFO_2966 PF02055 O-Glycosyl hydrolase family 30 BFO_2966 PF17189 BFO_2966 BFO_2967 PF13174 Tetratricopeptide repeat BFO_2967 PF13176 Tetratricopeptide repeat BFO_2967 PF13181 Tetratricopeptide repeat BFO_2968 PF00703 Glycosyl hydrolases family 2 BFO_2968 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BFO_2968 PF02837 Glycosyl hydrolases family 2, sugar binding domain BFO_2968 PF16355 BFO_2968 BFO_2969 PF00009 Elongation factor Tu GTP binding domain BFO_2969 PF00679 Elongation factor G C-terminus BFO_2969 PF03144 Elongation factor Tu domain 2 BFO_2969 PF06421 GTP-binding protein LepA C-terminus BFO_2970 PF07715 TonB-dependent Receptor Plug Domain BFO_2970 PF13715 BFO_2970 BFO_2972 PF07980 SusD family BFO_2972 PF14322 Starch-binding associating with outer membrane BFO_2973 PF00497 Bacterial extracellular solute-binding proteins, family 3 BFO_2973 PF01464 Transglycosylase SLT domain BFO_2974 PF01938 TRAM domain BFO_2974 PF05958 tRNA (Uracil-5-)-methyltransferase BFO_2975 PF00391 PEP-utilising enzyme, mobile domain BFO_2975 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BFO_2975 PF02896 PEP-utilising enzyme, TIM barrel domain BFO_2976 PF04397 LytTr DNA-binding domain BFO_2977 PF00498 FHA domain BFO_2979 PF00498 FHA domain BFO_2979 PF13717 BFO_2979 BFO_2981 PF00069 Protein kinase domain BFO_2985 PF00593 TonB dependent receptor BFO_2985 PF07715 TonB-dependent Receptor Plug Domain BFO_2985 PF13715 BFO_2985 BFO_2986 PF07980 SusD family BFO_2986 PF14322 Starch-binding associating with outer membrane BFO_2987 PF13527 Acetyltransferase (GNAT) domain BFO_2988 PF09924 Uncharacterized conserved protein (DUF2156) BFO_2989 PF00155 Aminotransferase class I and II BFO_2990 PF04542 Sigma-70 region 2 BFO_2990 PF08281 Sigma-70, region 4 BFO_2991 PF13568 Outer membrane protein beta-barrel domain BFO_2994 PF06930 BFO_2994 BFO_2995 PF01668 SmpB protein BFO_2996 PF07670 Nucleoside recognition BFO_2999 PF00719 Inorganic pyrophosphatase BFO_3001 PF12760 Transposase zinc-ribbon domain BFO_3001 PF12762 BFO_3001 BFO_3002 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BFO_3004 PF04542 Sigma-70 region 2 BFO_3004 PF08281 Sigma-70, region 4 BFO_3006 PF06889 BFO_3006 BFO_3007 PF02390 Putative methyltransferase BFO_3008 PF01883 Domain of unknown function DUF59 BFO_3008 PF10609 ParA/MinD ATPase like BFO_3010 PF03572 Peptidase family S41 BFO_3010 PF13180 PDZ domain BFO_3011 PF00294 pfkB family carbohydrate kinase BFO_3014 PF00593 TonB dependent receptor BFO_3014 PF07715 TonB-dependent Receptor Plug Domain BFO_3014 PF13715 BFO_3014 BFO_3015 PF16215 BFO_3015 BFO_3021 PF00884 Sulfatase BFO_3024 PF03840 Preprotein translocase SecG subunit BFO_3026 PF04390 Lipopolysaccharide-assembly BFO_3027 PF00158 Sigma-54 interaction domain BFO_3027 PF02954 Bacterial regulatory protein, Fis family BFO_3028 PF01553 Acyltransferase BFO_3029 PF01066 CDP-alcohol phosphatidyltransferase BFO_3030 PF13561 Enoyl-(Acyl carrier protein) reductase BFO_3031 PF01467 Cytidylyltransferase BFO_3033 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BFO_3034 PF16125 BFO_3034 BFO_3035 PF04055 Radical SAM superfamily BFO_3035 PF13394 4Fe-4S single cluster domain BFO_3036 PF13616 PPIC-type PPIASE domain BFO_3036 PF13623 BFO_3036 BFO_3037 PF06835 Lipopolysaccharide-assembly, LptC-related BFO_3040 PF13387 BFO_3040 BFO_3041 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase BFO_3042 PF01043 SecA preprotein cross-linking domain BFO_3042 PF02810 SEC-C motif BFO_3042 PF07516 SecA Wing and Scaffold domain BFO_3042 PF07517 SecA DEAD-like domain BFO_3043 PF00072 Response regulator receiver domain BFO_3043 PF00512 His Kinase A (phospho-acceptor) domain BFO_3043 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BFO_3043 PF07494 Two component regulator propeller BFO_3043 PF12833 Helix-turn-helix domain BFO_3044 PF00515 Tetratricopeptide repeat BFO_3044 PF13414 TPR repeat BFO_3044 PF13424 Tetratricopeptide repeat BFO_3044 PF13432 Tetratricopeptide repeat BFO_3045 PF01327 Polypeptide deformylase BFO_3046 PF03652 Uncharacterised protein family (UPF0081) BFO_3047 PF02397 BFO_3047 BFO_3047 PF13727 CoA-binding domain BFO_3048 PF01548 BFO_3048 BFO_3048 PF02371 BFO_3048 BFO_3050 PF00448 SRP54-type protein, GTPase domain BFO_3050 PF02881 SRP54-type protein, helical bundle domain BFO_3050 PF02978 Signal peptide binding domain BFO_3051 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BFO_3051 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BFO_3052 PF02687 BFO_3052 BFO_3052 PF12704 MacB-like periplasmic core domain BFO_3053 PF00155 Aminotransferase class I and II BFO_3055 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BFO_3055 PF07992 Pyridine nucleotide-disulphide oxidoreductase BFO_3056 PF00155 Aminotransferase class I and II BFO_3057 PF02622 Uncharacterized ACR, COG1678 BFO_3058 PF01053 Cys/Met metabolism PLP-dependent enzyme BFO_3059 PF12698 ABC-2 family transporter protein BFO_3060 PF00005 ABC transporter BFO_3060 PF13732 BFO_3060 BFO_3061 PF01807 CHC2 zinc finger BFO_3061 PF08275 DNA primase catalytic core, N-terminal domain BFO_3061 PF10410 DnaB-helicase binding domain of primase BFO_3061 PF13155 Toprim-like BFO_3062 PF04932 BFO_3062 BFO_3073 PF04977 Septum formation initiator BFO_3077 PF00004 ATPase family associated with various cellular activities (AAA) BFO_3077 PF02190 ATP-dependent protease La (LON) domain BFO_3077 PF05362 Lon protease (S16) C-terminal proteolytic domain BFO_3078 PF00326 Prolyl oligopeptidase family BFO_3078 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BFO_3079 PF14257 BFO_3079 BFO_3080 PF00326 Prolyl oligopeptidase family BFO_3080 PF07676 WD40-like Beta Propeller Repeat BFO_3081 PF01370 NAD dependent epimerase/dehydratase family BFO_3082 PF02545 Maf-like protein BFO_3083 PF13366 BFO_3083 BFO_3084 PF16363 BFO_3084 BFO_3087 PF01386 Ribosomal L25p family BFO_3087 PF14693 Ribosomal protein TL5, C-terminal domain BFO_3088 PF01195 Peptidyl-tRNA hydrolase BFO_3089 PF01479 S4 domain BFO_3090 PF13715 BFO_3090 BFO_3091 PF02417 BFO_3091 BFO_3092 PF02417 BFO_3092 BFO_3093 PF01368 DHH family BFO_3094 PF16109 BFO_3094 BFO_3095 PF03572 Peptidase family S41 BFO_3096 PF17170 BFO_3096 BFO_3098 PF03901 BFO_3098 BFO_3099 PF00717 Peptidase S24-like BFO_3100 PF00005 ABC transporter BFO_3100 PF00664 ABC transporter transmembrane region BFO_3101 PF14498 Glycosyl hydrolase family 65, N-terminal domain BFO_3102 PF02321 Outer membrane efflux protein BFO_3103 PF16576 BFO_3103 BFO_3104 PF12698 ABC-2 family transporter protein BFO_3105 PF12698 ABC-2 family transporter protein BFO_3106 PF01040 UbiA prenyltransferase family BFO_3110 PF00593 TonB dependent receptor BFO_3110 PF07715 TonB-dependent Receptor Plug Domain BFO_3110 PF13715 BFO_3110 BFO_3111 PF07980 SusD family BFO_3111 PF14322 Starch-binding associating with outer membrane BFO_3112 PF02018 Carbohydrate binding domain BFO_3112 PF06964 Alpha-L-arabinofuranosidase C-terminus BFO_3114 PF00079 Serpin (serine protease inhibitor) BFO_3115 PF01965 DJ-1/PfpI family BFO_3116 PF03544 Gram-negative bacterial TonB protein C-terminal BFO_3117 PF02472 Biopolymer transport protein ExbD/TolR BFO_3118 PF01618 BFO_3118 BFO_3119 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BFO_3120 PF01513 ATP-NAD kinase BFO_3124 PF04338 Protein of unknown function, DUF481 BFO_3125 PF13612 BFO_3125 BFO_3126 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BFO_3126 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BFO_3126 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BFO_3126 PF10371 Domain of unknown function BFO_3126 PF13484 BFO_3126 BFO_3126 PF17147 BFO_3126 BFO_3127 PF13173 AAA domain BFO_3130 PF01063 Aminotransferase class IV BFO_3131 PF01145 SPFH domain / Band 7 family BFO_3131 PF15975 BFO_3131 BFO_3132 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BFO_3134 PF13715 BFO_3134 BFO_3136 PF02080 TrkA-C domain BFO_3136 PF06826 BFO_3136 BFO_3137 PF12804 MobA-like NTP transferase domain BFO_3139 PF01066 CDP-alcohol phosphatidyltransferase BFO_3140 PF13419 Haloacid dehalogenase-like hydrolase BFO_3142 PF13437 HlyD family secretion protein BFO_3143 PF00873 AcrB/AcrD/AcrF family BFO_3144 PF02321 Outer membrane efflux protein BFO_3145 PF01261 Xylose isomerase-like TIM barrel BFO_3146 PF06439 Domain of Unknown Function (DUF1080) BFO_3147 PF13905 Thioredoxin-like BFO_3148 PF02151 UvrB/uvrC motif BFO_3148 PF02577 Bifunctional nuclease BFO_3149 PF04452 RNA methyltransferase BFO_3151 PF03631 BFO_3151 BFO_3153 PF00696 Amino acid kinase family BFO_3153 PF00742 Homoserine dehydrogenase BFO_3153 PF03447 Homoserine dehydrogenase, NAD binding domain BFO_3153 PF13840 ACT domain BFO_3154 PF01676 Metalloenzyme superfamily BFO_3154 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase BFO_3156 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BFO_3156 PF02585 GlcNAc-PI de-N-acetylase BFO_3158 PF00270 DEAD/DEAH box helicase BFO_3158 PF00271 Helicase conserved C-terminal domain BFO_3159 PF13568 Outer membrane protein beta-barrel domain BFO_3170 PF04304 BFO_3170 BFO_3171 PF04389 Peptidase family M28 BFO_3174 PF00881 Nitroreductase family BFO_3175 PF00501 AMP-binding enzyme BFO_3176 PF00665 Integrase core domain BFO_3180 PF13612 BFO_3180 BFO_3184 PF00176 SNF2 family N-terminal domain BFO_3184 PF00271 Helicase conserved C-terminal domain BFO_3185 PF00440 Bacterial regulatory proteins, tetR family BFO_3187 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BFO_3188 PF03176 MMPL family BFO_3195 PF13419 Haloacid dehalogenase-like hydrolase BFO_3197 PF00501 AMP-binding enzyme BFO_3198 PF13378 Enolase C-terminal domain-like BFO_3199 PF00378 Enoyl-CoA hydratase/isomerase family BFO_3200 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BFO_3201 PF00425 chorismate binding enzyme BFO_3202 PF04326 Divergent AAA domain BFO_3202 PF13749 ATP-dependent DNA helicase recG C-terminal BFO_3203 PF12728 Helix-turn-helix domain BFO_3204 PF13173 AAA domain BFO_3204 PF13635 BFO_3204 BFO_3205 PF12728 Helix-turn-helix domain BFO_3206 PF13155 Toprim-like BFO_3208 PF13715 BFO_3208 BFO_3208 PF14905 Outer membrane protein beta-barrel family BFO_3209 PF04055 Radical SAM superfamily BFO_3209 PF13353 4Fe-4S single cluster domain BFO_3212 PF12696 TraM recognition site of TraD and TraG BFO_3212 PF14293 BFO_3212 BFO_3215 PF11692 BFO_3215 BFO_3222 PF13595 BFO_3222 BFO_3223 PF10626 BFO_3223 BFO_3224 PF12988 Domain of unknown function, B BFO_3227 PF03703 BFO_3227 BFO_3237 PF08241 Methyltransferase domain BFO_3238 PF04191 Phospholipid methyltransferase BFO_3240 PF08989 Domain of unknown function (DUF1896) BFO_3242 PF10543 BFO_3242 BFO_3243 PF00589 Phage integrase family BFO_3245 PF00589 Phage integrase family BFO_3245 PF13102 Phage integrase SAM-like domain BFO_3245 PF17293 BFO_3245 BFO_3246 PF00589 Phage integrase family BFO_3246 PF13102 Phage integrase SAM-like domain BFO_3246 PF17293 BFO_3246 BFO_3250 PF12680 SnoaL-like domain BFO_3251 PF01638 HxlR-like helix-turn-helix BFO_3252 PF02498 BFO_3252 BFO_3256 PF13787 BFO_3256 BFO_3257 PF02311 AraC-like ligand binding domain BFO_3257 PF12833 Helix-turn-helix domain BFO_3258 PF01554 MatE BFO_3261 PF09357 BFO_3261 BFO_3263 PF11888 BFO_3263 BFO_3264 PF13173 AAA domain BFO_3264 PF13635 BFO_3264 BFO_3265 PF13182 BFO_3265 BFO_3270 PF13476 AAA domain BFO_3272 PF00082 Subtilase family BFO_3273 PF00004 ATPase family associated with various cellular activities (AAA) BFO_3274 PF01381 Helix-turn-helix BFO_3275 PF01609 Transposase DDE domain BFO_3275 PF05598 BFO_3275 BFO_3278 PF01548 BFO_3278 BFO_3278 PF02371 BFO_3278 BFO_3280 PF13102 Phage integrase SAM-like domain BFO_3280 PF17293 BFO_3280 BFO_3283 PF00593 TonB dependent receptor BFO_3283 PF07715 TonB-dependent Receptor Plug Domain BFO_3285 PF01497 Periplasmic binding protein BFO_3286 PF00089 Trypsin BFO_3287 PF00468 Ribosomal protein L34 BFO_3288 PF03793 PASTA domain BFO_3289 PF00849 RNA pseudouridylate synthase BFO_3289 PF01479 S4 domain BFO_3290 PF01820 D-ala D-ala ligase N-terminus BFO_3290 PF07478 D-ala D-ala ligase C-terminus BFO_3291 PF01553 Acyltransferase BFO_3292 PF02629 CoA binding domain BFO_3292 PF06971 Putative DNA-binding protein N-terminus BFO_3293 PF01557 Fumarylacetoacetate (FAA) hydrolase family BFO_3294 PF01364 Peptidase family C25 BFO_3297 PF03572 Peptidase family S41 BFO_3297 PF07676 WD40-like Beta Propeller Repeat BFO_3297 PF14684 Tricorn protease C1 domain BFO_3297 PF14685 Tricorn protease PDZ domain BFO_3298 PF00703 Glycosyl hydrolases family 2 BFO_3298 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BFO_3298 PF02837 Glycosyl hydrolases family 2, sugar binding domain BFO_3299 PF01042 Endoribonuclease L-PSP BFO_3300 PF00795 Carbon-nitrogen hydrolase BFO_3301 PF01553 Acyltransferase BFO_3303 PF05693 Glycogen synthase BFO_3305 PF00343 Carbohydrate phosphorylase BFO_3305 PF11897 BFO_3305 BFO_3307 PF13561 Enoyl-(Acyl carrier protein) reductase BFO_3308 PF00294 pfkB family carbohydrate kinase BFO_3309 PF09861 Domain of unknown function (DUF2088) BFO_3310 PF12732 BFO_3310 BFO_3311 PF03883 BFO_3311 BFO_3314 PF00593 TonB dependent receptor BFO_3314 PF07715 TonB-dependent Receptor Plug Domain BFO_3314 PF13715 BFO_3314 BFO_3315 PF07980 SusD family BFO_3315 PF14322 Starch-binding associating with outer membrane BFO_3323 PF07715 TonB-dependent Receptor Plug Domain BFO_3323 PF13715 BFO_3323 BFO_3324 PF08282 haloacid dehalogenase-like hydrolase BFO_3325 PF03807 NADP oxidoreductase coenzyme F420-dependent BFO_3325 PF10728 Domain of unknown function (DUF2520) BFO_3326 PF00881 Nitroreductase family BFO_3327 PF01636 Phosphotransferase enzyme family BFO_3328 PF01197 Ribosomal protein L31 BFO_3329 PF01116 Fructose-bisphosphate aldolase class-II BFO_3330 PF13481 AAA domain BFO_3330 PF13541 Subunit ChlI of Mg-chelatase BFO_3331 PF01909 Nucleotidyltransferase domain BFO_3332 PF01934 Protein of unknown function DUF86 BFO_3336 PF03486 HI0933-like protein BFO_3338 PF14602 Hexapeptide repeat of succinyl-transferase BFO_3339 PF10672 S-adenosylmethionine-dependent methyltransferase BFO_3340 PF01612 3'-5' exonuclease BFO_3341 PF16702 BFO_3341 BFO_3342 PF00698 Acyl transferase domain BFO_3343 PF02416 mttA/Hcf106 family BFO_3344 PF00902 Sec-independent protein translocase protein (TatC) BFO_3345 PF00905 Penicillin binding protein transpeptidase domain BFO_3345 PF00912 Transglycosylase BFO_3346 PF00772 DnaB-like helicase N terminal domain BFO_3346 PF03796 DnaB-like helicase C terminal domain BFO_3347 PF06439 Domain of Unknown Function (DUF1080) BFO_3348 PF00005 ABC transporter BFO_3348 PF12848 ABC transporter BFO_3350 PF01808 AICARFT/IMPCHase bienzyme BFO_3350 PF02142 MGS-like domain BFO_3351 PF06723 MreB/Mbl protein BFO_3352 PF04085 rod shape-determining protein MreC BFO_3354 PF00905 Penicillin binding protein transpeptidase domain BFO_3354 PF03717 Penicillin-binding Protein dimerisation domain BFO_3355 PF01098 BFO_3355 BFO_3356 PF00152 tRNA synthetases class II (D, K and N) BFO_3356 PF01336 OB-fold nucleic acid binding domain BFO_3357 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BFO_3357 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BFO_3358 PF00342 Phosphoglucose isomerase BFO_3359 PF14052 Capsule assembly protein Wzi BFO_3360 PF01250 Ribosomal protein S6 BFO_3361 PF01084 Ribosomal protein S18 BFO_3362 PF01281 Ribosomal protein L9, N-terminal domain BFO_3362 PF03948 Ribosomal protein L9, C-terminal domain BFO_3363 PF01520 N-acetylmuramoyl-L-alanine amidase