locus_tag	old_locus_tag	gene	Name	start	end	strand	product	note	type	ID	NCBI
BFO_0001	BFO_0001	dnaA	dnaA	547	1959	+	chromosomal replication initiator protein DnaA	identified by match to protein family HMM PF00308%3B match to protein family HMM PF08299%3B match to protein family HMM TIGR00362	gene	gene0	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0001
BFO_0002	BFO_0002		BFO_0002	1971	4364	-	efflux ABC transporter%2C permease protein	identified by match to protein family HMM PF02687	gene	gene1	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0002
BFO_0003	BFO_0003	rplS	rplS	4722	5078	-	ribosomal protein L19	identified by match to protein family HMM PF01245%3B match to protein family HMM TIGR01024	gene	gene2	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0003
BFO_0004	BFO_0004		BFO_0004	5337	8339	+	beta-lactamase	identified by match to protein family HMM PF00144%3B match to protein family HMM PF00933	gene	gene3	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0004
BFO_0005	BFO_0005		BFO_0005	8415	8594	-	hypothetical protein	identified by glimmer%3B putative	gene	gene4	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0005
BFO_0006	BFO_0006		BFO_0006	8714	9475	+	Acyltransferase	identified by match to protein family HMM PF01553	gene	gene5	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0006
BFO_0007	BFO_0007		BFO_0007	9496	10965	-	FAD dependent oxidoreductase	identified by match to protein family HMM PF01266	gene	gene6	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0007
BFO_0008	BFO_0008		BFO_0008	11003	12229	-	putative beta-ketoacyl-acyl-carrier-protein synthase I	identified by match to protein family HMM PF00109%3B match to protein family HMM PF02801	gene	gene7	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0008
BFO_0009	BFO_0009		BFO_0009	12334	14049	-	hypothetical protein		gene	gene8	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0009
BFO_0010	BFO_0010		BFO_0010	14070	15539	-	leucine rich repeat protein		gene	gene9	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0010
BFO_0011	BFO_0011		BFO_0011	15546	17579	-	peptidase family M13	identified by match to protein family HMM PF01431%3B match to protein family HMM PF05649	gene	gene10	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0011
BFO_0012	BFO_0012		BFO_0012	17837	18472	-	hypothetical protein		gene	gene11	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0012
BFO_0014	BFO_0014		BFO_0014	18765	19940	+	putative lipoprotein		gene	gene12	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0014
BFO_0015	BFO_0015		BFO_0015	19937	20974	+	iron chelate uptake ABC transporter%2C FeCT family%2C permease protein	identified by match to protein family HMM PF01032	gene	gene13	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0015
BFO_0016	BFO_0016		BFO_0016	20971	21984	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene14	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0016
BFO_0017	BFO_0017		BFO_0017	22065	23321	-	hypothetical protein		gene	gene15	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0017
BFO_0018	BFO_0018		BFO_0018	23385	24002	+	hypothetical protein		gene	gene16	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0018
BFO_0019	BFO_0019		BFO_0019	24030	24818	+	putative dihydroorotate oxidase%2C electron transfer subunit	identified by match to protein family HMM PF00175%3B match to protein family HMM PF00970	gene	gene17	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0019
BFO_0020	BFO_0020		BFO_0020	24806	25720	+	dihydroorotate dehydrogenase 1B	identified by match to protein family HMM PF01180%3B match to protein family HMM TIGR01037	gene	gene18	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0020
BFO_0021	BFO_0021		BFO_0021	25734	27995	+	putative internalin-J		gene	gene19	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0021
BFO_0022	BFO_0022		BFO_0022	28059	29333	+	hypothetical protein		gene	gene20	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0022
BFO_0023	BFO_0023		BFO_0023	29338	30039	+	Mg2+ transporter-C%2C MgtC family	identified by match to protein family HMM PF02308	gene	gene21	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0023
BFO_0024	BFO_0024		BFO_0024	30442	30945	+	hypothetical protein		gene	gene22	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0024
BFO_0025	BFO_0025	truA	truA	31260	32018	+	tRNA pseudouridine synthase A	identified by match to protein family HMM PF01416%3B match to protein family HMM TIGR00071	gene	gene23	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0025
BFO_0026	BFO_0026	cobB	cobB	32914	34236	-	cobyrinic acid a%2Cc-diamide synthase	identified by match to protein family HMM PF01656%3B match to protein family HMM PF07685%3B match to protein family HMM TIGR00379	gene	gene25	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0026
BFO_0027	BFO_0027		BFO_0027	32018	32917	+	putative membrane protein	identified by match to protein family HMM PF00892	gene	gene24	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0027
BFO_0028	BFO_0028		BFO_0028	34748	37270	-	polysaccharide deacetylase	identified by match to protein family HMM PF00759%3B match to protein family HMM PF01522%3B match to protein family HMM PF02927	gene	gene26	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0028
BFO_0029	BFO_0029		BFO_0029	37320	39122	-	hypothetical protein		gene	gene27	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0029
BFO_0030	BFO_0030		BFO_0030	39153	42347	-	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene28	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0030
BFO_0031	BFO_0031		BFO_0031	42420	43274	-	putative lipoprotein		gene	gene29	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0031
BFO_0032	BFO_0032		BFO_0032	43302	45182	-	tetratricopeptide repeat protein	identified by match to protein family HMM PF07719	gene	gene30	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0032
BFO_0033	BFO_0033		BFO_0033	45202	48300	-	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene31	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0033
BFO_0034	BFO_0034		BFO_0034	48637	49545	-	hypothetical protein		gene	gene32	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0034
BFO_0035	BFO_0035		BFO_0035	49928	53017	+	fibronectin type III domain protein	identified by match to protein family HMM PF00041	gene	gene33	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0035
BFO_0036	BFO_0036		BFO_0036	53041	54507	+	glycosyltransferase%2C group 2 family protein	identified by match to protein family HMM PF00535	gene	gene34	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0036
BFO_0037	BFO_0037		BFO_0037	54504	55439	+	hypothetical protein		gene	gene35	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0037
BFO_0038	BFO_0038		BFO_0038	55448	56764	+	hypothetical protein	identified by match to protein family HMM PF08486%3B match to protein family HMM TIGR02669	gene	gene36	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0038
BFO_0039	BFO_0039		BFO_0039	56781	58082	+	putative membrane protein		gene	gene37	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0039
BFO_0040	BFO_0040		BFO_0040	58090	59328	+	hypothetical protein	identified by match to protein family HMM PF07075	gene	gene38	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0040
BFO_0041	BFO_0041		BFO_0041	59644	60816	+	putative membrane protein		gene	gene39	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0041
BFO_0042	BFO_0042		BFO_0042	60813	61664	+	hypothetical protein		gene	gene40	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0042
BFO_0043	BFO_0043		BFO_0043	62478	63710	-	Cof-like hydrolase	identified by match to protein family HMM PF00702%3B match to protein family HMM PF03061%3B match to protein family HMM PF05116%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR00369%3B match to protein family HMM TIGR01484	gene	gene42	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0043
BFO_0044	BFO_0044	murQ	murQ	61661	62494	+	N-acetylmuramic acid 6-phosphate etherase	identified by match to protein family HMM PF01380%3B match to protein family HMM TIGR00274	gene	gene41	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0044
BFO_0045	BFO_0045		BFO_0045	63743	64384	-	hypothetical protein	identified by glimmer%3B putative	gene	gene43	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0045
BFO_0046	BFO_0046		BFO_0046	65180	66961	+	peptidase%2C S41 family	identified by match to protein family HMM PF03572	gene	gene44	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0046
BFO_0047	BFO_0047		BFO_0047	66969	67217	+		hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene45	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0047
BFO_0048	BFO_0048		BFO_0048	67205	68101	+	lanthionine synthetase C-like protein	identified by match to protein family HMM PF05147	gene	gene46	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0048
BFO_0049	BFO_0049		BFO_0049	68265	68381	+	hypothetical protein	identified by glimmer%3B putative	gene	gene47	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0049
BFO_0050	BFO_0050		BFO_0050	69291	70517	+	hypothetical protein	identified by glimmer%3B putative	gene	gene48	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0050
BFO_0051	BFO_0051		BFO_0051	71126	72466	-	transposase%2C IS4 family	identified by match to protein family HMM PF01609	gene	gene50	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0051
BFO_0052	BFO_0052		BFO_0052	70514	71173	+	hypothetical protein		gene	gene49	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0052
BFO_0053	BFO_0053		BFO_0053	72528	73418	+	hypothetical protein		gene	gene51	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0053
BFO_0054	BFO_0054		BFO_0054	73429	74667	+	radical SAM domain protein	identified by match to protein family HMM PF04055	gene	gene52	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0054
BFO_0055	BFO_0055		BFO_0055	74881	75888	+	hypothetical protein		gene	gene53	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0055
BFO_0056	BFO_0056		BFO_0056	76084	76485	-	hypothetical protein		gene	gene54	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0056
BFO_0057	BFO_0057		BFO_0057	76441	76584	+	hypothetical protein	identified by glimmer%3B putative	gene	gene55	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0057
BFO_0058	BFO_0058		BFO_0058	77086	77238	+	hypothetical protein	identified by glimmer%3B putative	gene	gene56	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0058
BFO_0059	BFO_0059		BFO_0059	77544	77687	-	hypothetical protein	identified by glimmer%3B putative	gene	gene57	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0059
BFO_0060	BFO_0060		BFO_0060	77692	79311	+	radical SAM domain protein	identified by match to protein family HMM PF04055	gene	gene58	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0060
BFO_0061	BFO_0061		BFO_0061	79339	79860	+	hypothetical protein		gene	gene59	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0061
BFO_0062	BFO_0062		BFO_0062	79999	80925	+		transposase%2C IS4 family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01609	pseudogene	gene60	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0062
BFO_0063	BFO_0063		BFO_0063	80888	81166	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene61	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0063
BFO_0064	BFO_0064		BFO_0064	81484	81609	+	hypothetical protein	identified by glimmer%3B putative	gene	gene62	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0064
BFO_0065	BFO_0065		BFO_0065	81612	81809	+		conserved hypothetical protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene63	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0065
BFO_0066	BFO_0066		BFO_0066	81860	81994	+		conserved hypothetical protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene64	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0066
BFO_0067	BFO_0067		BFO_0067	82233	82904	+	hypothetical protein		gene	gene65	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0067
BFO_0068	BFO_0068		BFO_0068	82901	84145	+	glycosyltransferase%2C group 1 family protein	identified by match to protein family HMM PF00534	gene	gene66	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0068
BFO_0069	BFO_0069		BFO_0069	84895	85035	+	hypothetical protein	identified by glimmer%3B putative	gene	gene67	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0069
BFO_0070	BFO_0070		BFO_0070	85329	85619	+	ribosomal peptide natural product small molecule		gene	gene68	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0070
BFO_0071	BFO_0071		BFO_0071	85646	85783	+	hypothetical protein	identified by glimmer%3B putative	gene	gene69	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0071
BFO_0072	BFO_0072		BFO_0072	85798	85923	+	hypothetical protein	identified by glimmer%3B putative	gene	gene70	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0072
BFO_0073	BFO_0073		BFO_0073	85877	87046	+	hypothetical protein		gene	gene71	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0073
BFO_0074	BFO_0074		BFO_0074	87120	87899	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene72	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0074
BFO_0075	BFO_0075		BFO_0075	87896	88057	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene73	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0075
BFO_0076	BFO_0076		BFO_0076	88254	88391	+	hypothetical protein	identified by glimmer%3B putative	gene	gene74	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0076
BFO_0077	BFO_0077		BFO_0077	88476	88664	-	hypothetical protein	identified by glimmer%3B putative	gene	gene75	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0077
BFO_0078	BFO_0078		BFO_0078	88697	89875	+	putative lipoprotein		gene	gene76	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0078
BFO_0079	BFO_0079		BFO_0079	89889	91385	+	radical SAM domain protein	identified by match to protein family HMM PF04055	gene	gene77	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0079
BFO_0080	BFO_0080		BFO_0080	91343	92611	+	hypothetical protein		gene	gene78	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0080
BFO_0081	BFO_0081		BFO_0081	93445	93930	-		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene80	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0081
BFO_0082	BFO_0082		BFO_0082	92615	93448	+	peptidase%2C C39 family	identified by match to protein family HMM PF03412	gene	gene79	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0082
BFO_0083	BFO_0083		BFO_0083	93931	94437	-		transposase%2C IS4 family%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene81	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0083
BFO_0084	BFO_0084		BFO_0084	94496	94705	+	hypothetical protein		gene	gene82	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0084
BFO_0085	BFO_0085		BFO_0085	94827	94958	+	hypothetical protein	identified by glimmer%3B putative	gene	gene83	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0085
BFO_0086	BFO_0086		BFO_0086	95583	96878	+	radical SAM domain protein	identified by match to protein family HMM PF04055	gene	gene84	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0086
BFO_0087	BFO_0087		BFO_0087	96943	98526	+	peptidase%2C S41 family	identified by match to protein family HMM PF03572	gene	gene85	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0087
BFO_0088	BFO_0088		BFO_0088	99069	100325	+	peptidase%2C C39 family	identified by match to protein family HMM PF03412	gene	gene86	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0088
BFO_0089	BFO_0089		BFO_0089	100592	101551	+	hypothetical protein		gene	gene87	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0089
BFO_0090	BFO_0090		BFO_0090	101561	102697	+	GumN protein		gene	gene88	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0090
BFO_0091	BFO_0091		BFO_0091	103004	103537	+	hypothetical protein		gene	gene89	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0091
BFO_0092	BFO_0092		BFO_0092	103534	104748	+	glycosyltransferase%2C group 1 family protein	identified by match to protein family HMM PF00534	gene	gene90	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0092
BFO_0093	BFO_0093		BFO_0093	104786	105715	+	LytTr DNA-binding domain protein	identified by match to protein family HMM PF04397	gene	gene91	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0093
BFO_0094	BFO_0094		BFO_0094	106544	107707	+	integrase core domain protein	identified by match to protein family HMM PF00665	gene	gene92	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0094
BFO_0095	BFO_0095		BFO_0095	107881	108021	+	hypothetical protein		gene	gene93	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0095
BFO_0096	BFO_0096		BFO_0096	108054	109244	+	lanthionine synthetase C-like protein	identified by match to protein family HMM PF05147	gene	gene94	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0096
BFO_0097	BFO_0097		BFO_0097	109881	112151	+	carbohydrate binding domain protein	identified by match to protein family HMM PF02018%3B match to protein family HMM PF03572	gene	gene95	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0097
BFO_0098	BFO_0098		BFO_0098	113031	113252	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene96	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0098
BFO_0099	BFO_0099		BFO_0099	114083	115303	+	hypothetical protein		gene	gene97	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0099
BFO_0100	BFO_0100		BFO_0100	115308	116768	+	radical SAM domain protein	identified by match to protein family HMM PF04055	gene	gene98	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0100
BFO_0101	BFO_0101		BFO_0101	116781	117956	+	hypothetical protein		gene	gene99	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0101
BFO_0102	BFO_0102		BFO_0102	117960	119207	+	peptidase%2C C39 family	identified by match to protein family HMM PF03412	gene	gene100	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0102
BFO_0103	BFO_0103		BFO_0103	119457	119939	+	hypothetical protein		gene	gene101	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0103
BFO_0104	BFO_0104		BFO_0104	119936	121180	+	glycosyltransferase%2C group 1 family protein	identified by match to protein family HMM PF00534	gene	gene102	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0104
BFO_0105	BFO_0105		BFO_0105	121611	122735	+	lanthionine synthetase C-like protein	identified by match to protein family HMM PF05147	gene	gene103	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0105
BFO_0106	BFO_0106		BFO_0106	123688	123819	-	hypothetical protein	identified by glimmer%3B putative	gene	gene105	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0106
BFO_0107	BFO_0107		BFO_0107	122704	123726	+	GumN protein		gene	gene104	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0107
BFO_0108	BFO_0108		BFO_0108	123961	124857	+	GroES-like protein	identified by match to protein family HMM PF08240	gene	gene106	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0108
BFO_0109	BFO_0109		BFO_0109	125074	127296	+		lantibiotic dehydratase%2C C-terminal domain protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF04737%3B match to protein family HMM PF04738	pseudogene	gene107	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0109
BFO_0110	BFO_0110		BFO_0110	127377	128177	+		thiopeptide-type bacteriocin biosynthesis domain protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM TIGR03891	pseudogene	gene108	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0110
BFO_0111	BFO_0111		BFO_0111	128170	130377	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664%3B match to protein family HMM PF03412	gene	gene109	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0111
BFO_0112	BFO_0112		BFO_0112	130388	131701	+	hypothetical protein		gene	gene110	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0112
BFO_0113	BFO_0113		BFO_0113	131703	132404	+	hypothetical protein		gene	gene111	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0113
BFO_0114	BFO_0114		BFO_0114	132395	133165	+	hypothetical protein		gene	gene112	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0114
BFO_0115	BFO_0115		BFO_0115	133162	133722	+	hypothetical protein	identified by glimmer%3B putative	gene	gene113	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0115
BFO_0116	BFO_0116		BFO_0116	133691	134380	+	hypothetical protein		gene	gene114	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0116
BFO_0117	BFO_0117		BFO_0117	134417	135097	+	LPS glycosyltransferase	identified by match to protein family HMM PF01755	gene	gene115	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0117
BFO_0118	BFO_0118	asnS	asnS	135217	136614	-	asparagine--tRNA ligase	identified by match to protein family HMM PF00152%3B match to protein family HMM PF01336%3B match to protein family HMM TIGR00457	gene	gene116	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0118
BFO_0119	BFO_0119		BFO_0119	136637	137935	-	pseudouridylate synthase	identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00093	gene	gene117	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0119
BFO_0120	BFO_0120	purB	purB	138021	139364	-	adenylosuccinate lyase	identified by match to protein family HMM PF00206%3B match to protein family HMM PF08328%3B match to protein family HMM TIGR00928	gene	gene118	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0120
BFO_0121	BFO_0121		BFO_0121	139629	140624	-	transcriptional regulator%2C AraC family	identified by match to protein family HMM PF00165	gene	gene119	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0121
BFO_0122	BFO_0122		BFO_0122	140746	141960	-	putative lipoprotein		gene	gene120	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0122
BFO_0123	BFO_0123		BFO_0123	141981	144356	-	TonB-dependent receptor plug domain protein	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715	gene	gene121	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0123
BFO_0124	BFO_0124		BFO_0124	144556	146301	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664%3B match to protein family HMM PF02463	gene	gene122	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0124
BFO_0125	BFO_0125		BFO_0125	146304	148001	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene123	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0125
BFO_0126	BFO_0126		BFO_0126	148202	148274	-	tRNA-Phe		tRNA	gene124	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0126
BFO_0127	BFO_0127		BFO_0127	148576	149880	+	transporter%2C anaerobic C4-dicarboxylate uptake (Dcu) family	identified by match to protein family HMM PF03605%3B match to protein family HMM TIGR00770	gene	gene125	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0127
BFO_0128	BFO_0128		BFO_0128	149936	150334	-	ketopantoate reductase PanE/ApbA C terminal domain protein	identified by match to protein family HMM PF08546	gene	gene126	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0128
BFO_0129	BFO_0129		BFO_0129	150347	150937	-	glutamine amidotransferase%2C class I	identified by match to protein family HMM PF00117%3B match to protein family HMM TIGR00566	gene	gene127	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0129
BFO_0130	BFO_0130		BFO_0130	150996	151967	+	para-aminobenzoate synthase component I	identified by match to protein family HMM PF00425	gene	gene128	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0130
BFO_0131	BFO_0131		BFO_0131	151995	152627	+	hypothetical protein		gene	gene129	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0131
BFO_0132	BFO_0132		BFO_0132	152682	152816	-	hypothetical protein	identified by glimmer%3B putative	gene	gene130	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0132
BFO_0133	BFO_0133		BFO_0133	152941	155652	+	pyruvate formate lyase	identified by match to protein family HMM PF02901	gene	gene131	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0133
BFO_0134	BFO_0134		BFO_0134	155699	155962	+	hypothetical protein		gene	gene132	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0134
BFO_0135	BFO_0135		BFO_0135	156044	157318	+	transporter%2C major facilitator family protein	identified by match to protein family HMM PF07690	gene	gene133	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0135
BFO_0136	BFO_0136		BFO_0136	157420	158373	+	putative pyruvate formate-lyase 1-activating enzyme	identified by match to protein family HMM PF00037%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR02494	gene	gene134	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0136
BFO_0137	BFO_0137		BFO_0137	158557	159522	+	pseudouridine synthase%2C RluA family	identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00005	gene	gene135	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0137
BFO_0138	BFO_0138		BFO_0138	159683	159964	+	putative 10 kDa chaperonin		gene	gene136	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0138
BFO_0139	BFO_0139		BFO_0139	159980	160792	+		oxidoreductase NAD-binding domain protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00175%3B match to protein family HMM PF00970	pseudogene	gene137	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0139
BFO_0140	BFO_0140	gltA	gltA	160789	162288	+		glutamate synthase (NADPH)%2C homotetrameric%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00070%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01316	pseudogene	gene138	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0140
BFO_0141	BFO_0141		BFO_0141	162395	162829	+	putative lipoprotein		gene	gene139	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0141
BFO_0142	BFO_0142		BFO_0142	162890	163042	+	hypothetical protein	identified by glimmer%3B putative	gene	gene140	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0142
BFO_0143	BFO_0143	mscL	mscL	163705	164121	-	large conductance mechanosensitive channel protein	identified by match to protein family HMM PF01741%3B match to protein family HMM TIGR00220	gene	gene142	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0143
BFO_0144	BFO_0144		BFO_0144	163082	163708	+	hydrolase%2C NUDIX family	identified by match to protein family HMM PF00293	gene	gene141	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0144
BFO_0145	BFO_0145	nhaA	nhaA	164182	165540	-	Na+/H+ antiporter NhaA	identified by match to protein family HMM PF06965%3B match to protein family HMM TIGR00773	gene	gene143	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0145
BFO_0146	BFO_0146		BFO_0146	165719	166468	-	LytTr DNA-binding domain protein	identified by match to protein family HMM PF00072%3B match to protein family HMM PF04397	gene	gene144	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0146
BFO_0147	BFO_0147		BFO_0147	166456	167475	-	histidine kinase	identified by match to protein family HMM PF06580	gene	gene145	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0147
BFO_0148	BFO_0148		BFO_0148	167671	168621	+	hypothetical protein		gene	gene146	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0148
BFO_0149	BFO_0149		BFO_0149	168928	171300	-	efflux ABC transporter%2C permease protein	identified by match to protein family HMM PF02687	gene	gene147	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0149
BFO_0150	BFO_0150		BFO_0150	171529	171717	-	hypothetical protein	identified by glimmer%3B putative	gene	gene148	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0150
BFO_0151	BFO_0151		BFO_0151	171910	174270	-	efflux ABC transporter%2C permease protein	identified by match to protein family HMM PF02687	gene	gene149	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0151
BFO_0152	BFO_0152		BFO_0152	174624	175298	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene150	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0152
BFO_0153	BFO_0153		BFO_0153	175580	177910	-	efflux ABC transporter%2C permease protein	identified by match to protein family HMM PF02687	gene	gene151	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0153
BFO_0154	BFO_0154		BFO_0154	178218	179348	-		efflux ABC transporter%2C permease protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF02687	pseudogene	gene152	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0154
BFO_0155	BFO_0155		BFO_0155	179358	180581	-		efflux ABC transporter%2C permease protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF02687	pseudogene	gene153	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0155
BFO_0156	BFO_0156		BFO_0156	180914	182167	-	efflux transporter%2C RND family%2C MFP subunit	identified by match to protein family HMM PF00529%3B match to protein family HMM TIGR01730	gene	gene154	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0156
BFO_0157	BFO_0157		BFO_0157	182180	182305	-	hypothetical protein	identified by glimmer%3B putative	gene	gene155	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0157
BFO_0158	BFO_0158		BFO_0158	182329	183594	-	outer membrane efflux protein	identified by match to protein family HMM PF02321	gene	gene156	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0158
BFO_0159	BFO_0159		BFO_0159	183952	187473	+	divergent AAA domain protein	identified by match to protein family HMM PF04326	gene	gene157	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0159
BFO_0160	BFO_0160		BFO_0160	187470	188828	+	Sigma-54 interaction domain protein	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00158%3B match to protein family HMM PF02954	gene	gene158	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0160
BFO_0161	BFO_0161		BFO_0161	188834	190147	+	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein	identified by match to protein family HMM PF02518	gene	gene159	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0161
BFO_0162	BFO_0162	ogt	ogt	190356	190691	+	methylated-DNA--[protein]-cysteine S-methyltransferase	identified by match to protein family HMM PF01035%3B match to protein family HMM TIGR00589	gene	gene160	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0162
BFO_0163	BFO_0163		BFO_0163	191041	191175	+	hypothetical protein	identified by glimmer%3B putative	gene	gene161	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0163
BFO_0164	BFO_0164		BFO_0164	192399	192569	-	hypothetical protein	identified by glimmer%3B putative	gene	gene162	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0164
BFO_0165	BFO_0165		BFO_0165	192933	193334	+	hypothetical protein		gene	gene163	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0165
BFO_0166	BFO_0166		BFO_0166	193363	195753	+	TonB-dependent receptor	identified by match to protein family HMM PF00593	gene	gene164	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0166
BFO_0167	BFO_0167		BFO_0167	195757	196407	+	putative membrane protein		gene	gene165	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0167
BFO_0168	BFO_0168		BFO_0168	196392	196679	+	hypothetical protein		gene	gene166	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0168
BFO_0169	BFO_0169		BFO_0169	196781	198130	-	glycosyl hydrolase%2C family 57	identified by match to protein family HMM PF03065	gene	gene167	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0169
BFO_0170	BFO_0170		BFO_0170	198117	199385	-	glycosyltransferase%2C group 1 family protein	identified by match to protein family HMM PF00534	gene	gene168	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0170
BFO_0171	BFO_0171		BFO_0171	199401	201335	-	putative glycogen debranching enzyme	identified by match to protein family HMM PF06202	gene	gene169	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0171
BFO_0172	BFO_0172		BFO_0172	201369	201542	-	hypothetical protein		gene	gene170	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0172
BFO_0173	BFO_0173		BFO_0173	201590	201712	+	hypothetical protein	identified by glimmer%3B putative	gene	gene171	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0173
BFO_0174	BFO_0174		BFO_0174	201684	201812	+	hypothetical protein	identified by glimmer%3B putative	gene	gene172	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0174
BFO_0175	BFO_0175		BFO_0175	201838	203511	-	AMP-binding enzyme	identified by match to protein family HMM PF00501	gene	gene173	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0175
BFO_0176	BFO_0176		BFO_0176	203554	204108	-	cupin domain protein	identified by match to protein family HMM PF01381%3B match to protein family HMM PF07883	gene	gene174	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0176
BFO_0177	BFO_0177		BFO_0177	204108	204227	-	hypothetical protein	identified by glimmer%3B putative	gene	gene175	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0177
BFO_0178	BFO_0178		BFO_0178	204238	204813	-	hypothetical protein		gene	gene176	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0178
BFO_0179	BFO_0179	coaE	coaE	204910	205494	-	dephospho-CoA kinase	identified by match to protein family HMM PF01121%3B match to protein family HMM TIGR00152	gene	gene177	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0179
BFO_0180	BFO_0180		BFO_0180	205491	206495	-	hypothetical protein		gene	gene178	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0180
BFO_0181	BFO_0181	yajC	yajC	206506	206844	-	preprotein translocase%2C YajC subunit	identified by match to protein family HMM PF02699%3B match to protein family HMM TIGR00739	gene	gene179	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0181
BFO_0182	BFO_0182	nusB	nusB	206926	207837	-	transcription antitermination factor NusB	identified by match to protein family HMM PF01029%3B match to protein family HMM TIGR01951	gene	gene180	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0182
BFO_0183	BFO_0183		BFO_0183	207814	207939	+	hypothetical protein	identified by glimmer%3B putative	gene	gene181	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0183
BFO_0184	BFO_0184		BFO_0184	208006	209046	-	L-asparaginase%2C type I	identified by match to protein family HMM PF00710%3B match to protein family HMM TIGR00519	gene	gene182	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0184
BFO_0185	BFO_0185		BFO_0185	209184	210161	+	CAAX amino terminal protease family protein	identified by match to protein family HMM PF02517	gene	gene183	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0185
BFO_0186	BFO_0186	bglA	bglA	210330	211205	-	licheninase	identified by match to protein family HMM PF00722	gene	gene184	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0186
BFO_0187	BFO_0187		BFO_0187	211289	212827	-	putative lipoprotein		gene	gene185	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0187
BFO_0188	BFO_0188		BFO_0188	212836	216243	-	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene186	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0188
BFO_0189	BFO_0189		BFO_0189	216370	217389	-	sigma factor regulatory protein%2C FecR/PupR family	identified by match to protein family HMM PF04773	gene	gene187	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0189
BFO_0190	BFO_0190		BFO_0190	217415	218077	-	RNA polymerase sigma-70 factor	identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937%3B match to protein family HMM TIGR02985	gene	gene188	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0190
BFO_0191	BFO_0191		BFO_0191	218235	218354	-	hypothetical protein	identified by glimmer%3B putative	gene	gene189	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0191
BFO_0192	BFO_0192		BFO_0192	218397	221351	+	hypothetical protein		gene	gene190	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0192
BFO_0193	BFO_0193	serC	serC	221384	222547	+	phosphoserine transaminase	identified by match to protein family HMM PF00266%3B match to protein family HMM TIGR01364	gene	gene191	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0193
BFO_0194	BFO_0194		BFO_0194	222575	222949	+	TIGR02436 family protein	identified by match to protein family HMM TIGR02436	gene	gene192	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0194
BFO_0195	BFO_0195		BFO_0195	222976	223896	+	D-phosphoglycerate dehydrogenase	identified by match to protein family HMM PF00389%3B match to protein family HMM PF02826	gene	gene193	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0195
BFO_0196	BFO_0196		BFO_0196	223990	225234	+	hypothetical protein	identified by match to protein family HMM PF06245	gene	gene194	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0196
BFO_0197	BFO_0197		BFO_0197	225287	225916	+	HAD hydrolase%2C family IA%2C variant 3	identified by match to protein family HMM PF00702	gene	gene195	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0197
BFO_0198	BFO_0198		BFO_0198	225913	226032	+	hypothetical protein	identified by glimmer%3B putative	gene	gene196	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0198
BFO_0199	BFO_0199		BFO_0199	226054	226602	+	RNA polymerase sigma factor%2C sigma-70 family	identified by match to protein family HMM PF08281%3B match to protein family HMM TIGR02937	gene	gene197	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0199
BFO_0200	BFO_0200		BFO_0200	226662	226883	+	hypothetical protein		gene	gene198	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0200
BFO_0201	BFO_0201		BFO_0201	226979	227257	+	hypothetical protein		gene	gene199	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0201
BFO_0202	BFO_0202		BFO_0202	227271	228506	+	hypothetical protein		gene	gene200	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0202
BFO_0203	BFO_0203		BFO_0203	228935	230497	+	hypothetical protein		gene	gene201	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0203
BFO_0204	BFO_0204		BFO_0204	230500	231063	+		CRISPR-associated RAMP protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF03787	pseudogene	gene202	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0204
BFO_0205	BFO_0205		BFO_0205	231060	232550	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene203	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0205
BFO_0206	BFO_0206		BFO_0206	232547	233980	+	CRISPR-associated RAMP protein	identified by match to protein family HMM PF03787	gene	gene204	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0206
BFO_0207	BFO_0207		BFO_0207	233980	234357	+	hypothetical protein	identified by glimmer%3B putative	gene	gene205	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0207
BFO_0208	BFO_0208		BFO_0208	234370	236391	+	CRISPR-associated protein	identified by match to protein family HMM PF03787%3B match to protein family HMM TIGR03986	gene	gene206	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0208
BFO_0209	BFO_0209		BFO_0209	236566	236931	+	hypothetical protein		gene	gene207	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0209
BFO_0210	BFO_0210		BFO_0210	237393	237518	-	hypothetical protein	identified by glimmer%3B putative	gene	gene208	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0210
BFO_0211	BFO_0211	ligA	ligA	238012	240111	+	DNA ligase (NAD+)	identified by match to protein family HMM PF00533%3B match to protein family HMM PF01653%3B match to protein family HMM PF03119%3B match to protein family HMM PF03120%3B match to protein family HMM TIGR00575	gene	gene209	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0211
BFO_0212	BFO_0212		BFO_0212	240108	240638	+	hypothetical protein		gene	gene210	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0212
BFO_0213	BFO_0213	dapA	dapA	240662	241555	+	dihydrodipicolinate synthase	identified by match to protein family HMM PF00701%3B match to protein family HMM TIGR00674	gene	gene211	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0213
BFO_0214	BFO_0214		BFO_0214	241649	242458	-	putative rhamnulose-1-phosphate aldolase	identified by match to protein family HMM PF00596	gene	gene212	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0214
BFO_0215	BFO_0215		BFO_0215	242482	243492	-	L-rhamnose-proton symport protein (RhaT)	identified by match to protein family HMM PF06379	gene	gene213	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0215
BFO_0216	BFO_0216	rhaA	rhaA	243517	244803	-	L-rhamnose isomerase	identified by match to protein family HMM PF06134%3B match to protein family HMM TIGR01748	gene	gene214	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0216
BFO_0217	BFO_0217		BFO_0217	244815	246296	-	carbohydrate kinase%2C FGGY family protein	identified by match to protein family HMM PF00370%3B match to protein family HMM PF02782	gene	gene215	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0217
BFO_0218	BFO_0218		BFO_0218	246354	246917	-	RNA polymerase sigma-70 factor	identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937%3B match to protein family HMM TIGR02985	gene	gene216	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0218
BFO_0219	BFO_0219		BFO_0219	247078	247434	-	hypothetical protein		gene	gene217	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0219
BFO_0220	BFO_0220	proS	proS	247485	248969	-	proline--tRNA ligase	identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM PF09180%3B match to protein family HMM TIGR00408	gene	gene218	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0220
BFO_0221	BFO_0221	panB	panB	248990	249811	-	3-methyl-2-oxobutanoate hydroxymethyltransferase	identified by match to protein family HMM PF02548%3B match to protein family HMM TIGR00222	gene	gene219	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0221
BFO_0222	BFO_0222		BFO_0222	250017	251288	-	peptidase%2C S41 family	identified by match to protein family HMM PF03572	gene	gene220	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0222
BFO_0223	BFO_0223		BFO_0223	251394	251513	+	hypothetical protein	identified by glimmer%3B putative	gene	gene221	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0223
BFO_0224	BFO_0224		BFO_0224	251488	252162	+	LemA family protein	identified by match to protein family HMM PF04011	gene	gene222	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0224
BFO_0225	BFO_0225		BFO_0225	252218	253129	+	peptidase%2C M48 family	identified by match to protein family HMM PF01435%3B match to protein family HMM PF05569	gene	gene223	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0225
BFO_0226	BFO_0226		BFO_0226	253164	253628	+	threonine/alanine tRNA ligase second additional domain protein	identified by match to protein family HMM PF07973	gene	gene224	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0226
BFO_0227	BFO_0227	pgk	pgk	253794	255056	+	phosphoglycerate kinase	identified by match to protein family HMM PF00162	gene	gene225	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0227
BFO_0228	BFO_0228		BFO_0228	255101	256501	+	MATE efflux family protein	identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797	gene	gene226	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0228
BFO_0229	BFO_0229	ribE	ribE	256518	257120	-	riboflavin synthase%2C alpha subunit	identified by match to protein family HMM PF00677%3B match to protein family HMM TIGR00187	gene	gene227	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0229
BFO_0230	BFO_0230		BFO_0230	257135	258781	-	diphosphate--fructose-6-phosphate 1-phosphotransferase	identified by match to protein family HMM PF00365%3B match to protein family HMM TIGR02477	gene	gene228	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0230
BFO_0231	BFO_0231		BFO_0231	258756	258908	-	hypothetical protein	identified by glimmer%3B putative	gene	gene229	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0231
BFO_0232	BFO_0232		BFO_0232	259025	259405	+	transcriptional regulator%2C BlaI/MecI/CopY family	identified by match to protein family HMM PF03965	gene	gene230	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0232
BFO_0233	BFO_0233		BFO_0233	259412	260851	+	TonB-dependent receptor	identified by match to protein family HMM PF03544%3B match to protein family HMM PF05569%3B match to protein family HMM TIGR01352	gene	gene231	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0233
BFO_0234	BFO_0234		BFO_0234	260860	261015	+	hypothetical protein		gene	gene232	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0234
BFO_0235	BFO_0235		BFO_0235	261116	261238	-	hypothetical protein	identified by glimmer%3B putative	gene	gene233	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0235
BFO_0236	BFO_0236		BFO_0236	262472	267904	+	hypothetical protein	identified by glimmer%3B putative	gene	gene234	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0236
BFO_0237	BFO_0237	dnaJ	dnaJ	268099	269250	-	chaperone protein DnaJ	identified by match to protein family HMM PF00226%3B match to protein family HMM PF00684%3B match to protein family HMM PF01556%3B match to protein family HMM TIGR02349	gene	gene235	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0237
BFO_0238	BFO_0238	grpE	grpE	269278	269889	-	co-chaperone GrpE	identified by match to protein family HMM PF01025	gene	gene236	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0238
BFO_0239	BFO_0239		BFO_0239	270110	271531	+	PDZ/DHR/GLGF domain protein	identified by match to protein family HMM PF00595	gene	gene237	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0239
BFO_0240	BFO_0240		BFO_0240	271555	274035	+	MutS2 family protein	identified by match to protein family HMM PF00488%3B match to protein family HMM PF01713	gene	gene238	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0240
BFO_0241	BFO_0241		BFO_0241	274067	275041	+	hypothetical protein		gene	gene239	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0241
BFO_0242	BFO_0242		BFO_0242	275134	276111	-	putative dihydroorotate dehydrogenase 2	identified by match to protein family HMM PF01180	gene	gene240	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0242
BFO_0243	BFO_0243		BFO_0243	276197	276862	-	pyridoxal phosphate enzyme%2C YggS family	identified by match to protein family HMM PF01168%3B match to protein family HMM TIGR00044	gene	gene241	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0243
BFO_0244	BFO_0244		BFO_0244	276859	277332	-	hypothetical protein		gene	gene242	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0244
BFO_0245	BFO_0245		BFO_0245	277341	277877	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene243	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0245
BFO_0246	BFO_0246		BFO_0246	278050	278295	+	hypothetical protein	identified by glimmer%3B putative	gene	gene244	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0246
BFO_0247	BFO_0247		BFO_0247	278338	278523	+	hypothetical protein		gene	gene245	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0247
BFO_0248	BFO_0248		BFO_0248	278677	278749	+	tRNA-Gly		tRNA	gene246	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0248
BFO_0249	BFO_0249		BFO_0249	278767	278855	+	tRNA-Leu		tRNA	gene247	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0249
BFO_0250	BFO_0250		BFO_0250	279068	280162	+	hypothetical protein	identified by glimmer%3B putative	gene	gene248	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0250
BFO_0251	BFO_0251	mfd	mfd	280640	283987	-	transcription-repair coupling factor	identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF02559%3B match to protein family HMM PF03461%3B match to protein family HMM TIGR00580	gene	gene249	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0251
BFO_0252	BFO_0252		BFO_0252	284071	285777	-	acyl-CoA dehydrogenase%2C C-terminal domain protein	identified by match to protein family HMM PF00441%3B match to protein family HMM PF02770%3B match to protein family HMM PF08028	gene	gene250	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0252
BFO_0253	BFO_0253	etfA_1	etfA_1	285786	286805	-	electron transfer flavoprotein subunit alpha	identified by match to protein family HMM PF00766%3B match to protein family HMM PF01012	gene	gene251	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0253
BFO_0254	BFO_0254	etfB_1	etfB_1	287073	287954	-	electron transfer flavoprotein subunit beta	identified by match to protein family HMM PF01012	gene	gene252	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0254
BFO_0255	BFO_0255		BFO_0255	288083	288211	-	hypothetical protein	identified by glimmer%3B putative	gene	gene253	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0255
BFO_0256	BFO_0256	kdsA	kdsA	288378	289184	-	3-deoxy-8-phosphooctulonate synthase	identified by match to protein family HMM PF00793%3B match to protein family HMM TIGR01362	gene	gene254	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0256
BFO_0257	BFO_0257	miaA_1	miaA_1	289211	290128	-	tRNA dimethylallyltransferase	identified by match to protein family HMM PF01715%3B match to protein family HMM TIGR00174	gene	gene255	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0257
BFO_0258	BFO_0258		BFO_0258	290255	290371	-	hypothetical protein	identified by glimmer%3B putative	gene	gene256	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0258
BFO_0259	BFO_0259		BFO_0259	290437	290583	-	hypothetical protein	identified by glimmer%3B putative	gene	gene257	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0259
BFO_0260	BFO_0260		BFO_0260	290538	290660	-	hypothetical protein	identified by glimmer%3B putative	gene	gene258	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0260
BFO_0261	BFO_0261	gap	gap	290713	291723	-	glyceraldehyde-3-phosphate dehydrogenase%2C type I	identified by match to protein family HMM PF00044%3B match to protein family HMM PF02800%3B match to protein family HMM TIGR01534	gene	gene259	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0261
BFO_0262	BFO_0262		BFO_0262	291884	292009	-	hypothetical protein	identified by glimmer%3B putative	gene	gene260	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0262
BFO_0263	BFO_0263		BFO_0263	291973	292287	-	hypothetical protein	identified by glimmer%3B putative	gene	gene261	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0263
BFO_0264	BFO_0264		BFO_0264	292319	292720	-	hypothetical protein		gene	gene262	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0264
BFO_0265	BFO_0265		BFO_0265	292735	292923	-	hypothetical protein		gene	gene263	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0265
BFO_0266	BFO_0266	prmA	prmA	293076	293930	-	ribosomal protein L11 methyltransferase	identified by match to protein family HMM PF06325	gene	gene264	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0266
BFO_0267	BFO_0267		BFO_0267	293936	294079	+	hypothetical protein	identified by glimmer%3B putative	gene	gene265	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0267
BFO_0268	BFO_0268		BFO_0268	294165	294521	+		conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene266	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0268
BFO_0269	BFO_0269		BFO_0269	294733	295344	-	putative oxygen regulatory protein NreC	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196	gene	gene267	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0269
BFO_0270	BFO_0270		BFO_0270	295341	297251	-	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein	identified by match to protein family HMM PF00515%3B match to protein family HMM PF02518%3B match to protein family HMM PF07730	gene	gene268	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0270
BFO_0271	BFO_0271		BFO_0271	297353	298621	-	hypothetical protein		gene	gene269	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0271
BFO_0272	BFO_0272		BFO_0272	298628	299902	-	hypothetical protein	identified by match to protein family HMM PF06250	gene	gene270	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0272
BFO_0273	BFO_0273		BFO_0273	299919	301031	+	repeat protein	identified by match to protein family HMM PF09479%3B match to protein family HMM TIGR02543	gene	gene271	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0273
BFO_0274	BFO_0274		BFO_0274	301224	301682	+	putative DNA-binding protein	identified by match to protein family HMM TIGR01201	gene	gene272	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0274
BFO_0275	BFO_0275		BFO_0275	301801	302223	+	hypothetical protein		gene	gene273	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0275
BFO_0276	BFO_0276		BFO_0276	302679	302825	+	hypothetical protein	identified by glimmer%3B putative	gene	gene274	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0276
BFO_0277	BFO_0277		BFO_0277	302884	303897	+	putative membrane protein	identified by match to protein family HMM PF05656	gene	gene275	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0277
BFO_0278	BFO_0278		BFO_0278	303906	305135	+	hypothetical protein	identified by glimmer%3B putative	gene	gene276	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0278
BFO_0279	BFO_0279		BFO_0279	305166	305849	+	hypothetical protein		gene	gene277	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0279
BFO_0280	BFO_0280		BFO_0280	305921	306187	+	hypothetical protein		gene	gene278	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0280
BFO_0281	BFO_0281		BFO_0281	306417	306536	+	hypothetical protein		gene	gene279	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0281
BFO_0282	BFO_0282		BFO_0282	306643	307314	-	hypothetical protein		gene	gene280	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0282
BFO_0283	BFO_0283		BFO_0283	307782	308375	-	hypothetical protein		gene	gene281	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0283
BFO_0284	BFO_0284	galE	galE	308397	309509	-	UDP-glucose 4-epimerase	identified by match to protein family HMM PF00106%3B match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF07993%3B match to protein family HMM TIGR01179	gene	gene282	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0284
BFO_0285	BFO_0285		BFO_0285	309604	309759	-	hypothetical protein		gene	gene283	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0285
BFO_0286	BFO_0286	rpmG	rpmG	309785	309973	-	ribosomal protein L33	identified by match to protein family HMM PF00471%3B match to protein family HMM TIGR01023	gene	gene284	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0286
BFO_0287	BFO_0287	rpmB	rpmB	309998	310237	-	ribosomal protein L28	identified by match to protein family HMM PF00830%3B match to protein family HMM TIGR00009	gene	gene285	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0287
BFO_0288	BFO_0288		BFO_0288	310356	310439	-	tRNA-Leu		tRNA	gene286	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0288
BFO_0289	BFO_0289		BFO_0289	310449	310533	-	tRNA-Leu		tRNA	gene287	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0289
BFO_0290	BFO_0290		BFO_0290	310656	310728	-	tRNA-Gly		tRNA	gene288	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0290
BFO_0291	BFO_0291		BFO_0291	311654	312433	-	Tat pathway signal sequence domain protein	identified by match to protein family HMM PF00657%3B match to protein family HMM TIGR01409	gene	gene290	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0291
BFO_0292	BFO_0292		BFO_0292	311553	311702	+	hypothetical protein	identified by glimmer%3B putative	gene	gene289	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0292
BFO_0293	BFO_0293		BFO_0293	312493	312990	-	YbaK/proline--tRNA ligase associated domain protein	identified by match to protein family HMM PF04073	gene	gene291	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0293
BFO_0294	BFO_0294		BFO_0294	313010	313822	-	purine nucleoside phosphorylase I%2C inosine and guanosine-specific	identified by match to protein family HMM PF00896%3B match to protein family HMM TIGR01697%3B match to protein family HMM TIGR01700	gene	gene292	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0294
BFO_0295	BFO_0295		BFO_0295	314086	314163	+	tRNA-Pro		tRNA	gene293	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0295
BFO_0296	BFO_0296		BFO_0296	314691	316196	+	tetratricopeptide repeat protein	identified by match to protein family HMM PF00196%3B match to protein family HMM PF00515	gene	gene294	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0296
BFO_0297	BFO_0297		BFO_0297	316284	316412	-	hypothetical protein	identified by glimmer%3B putative	gene	gene295	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0297
BFO_0298	BFO_0298		BFO_0298	316461	319625	+	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene296	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0298
BFO_0299	BFO_0299		BFO_0299	319649	321160	+	SusD family protein	identified by match to protein family HMM PF07980	gene	gene297	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0299
BFO_0300	BFO_0300		BFO_0300	321191	324325	+	putative beta-galactosidase	identified by match to protein family HMM PF00703%3B match to protein family HMM PF02836%3B match to protein family HMM PF02837%3B match to protein family HMM PF02929	gene	gene298	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0300
BFO_0301	BFO_0301		BFO_0301	324363	324614	+	hypothetical protein		gene	gene299	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0301
BFO_0302	BFO_0302		BFO_0302	324641	325267	+	putative lipoprotein	identified by match to protein family HMM PF03956	gene	gene300	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0302
BFO_0303	BFO_0303		BFO_0303	325427	326233	+	metallo-beta-lactamase domain protein	identified by match to protein family HMM PF00753	gene	gene301	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0303
BFO_0304	BFO_0304		BFO_0304	326236	326616	-	hypothetical protein	identified by match to protein family HMM PF06803	gene	gene302	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0304
BFO_0305	BFO_0305		BFO_0305	326618	326788	-	hypothetical protein		gene	gene303	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0305
BFO_0306	BFO_0306	fucI	fucI	326777	328570	+	arabinose isomerase	identified by match to protein family HMM PF02952%3B match to protein family HMM PF07881%3B match to protein family HMM PF07882%3B match to protein family HMM TIGR01089	gene	gene304	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0306
BFO_0307	BFO_0307	fucP	fucP	328567	329895	+	L-fucose:H+ symporter permease	identified by match to protein family HMM PF07690%3B match to protein family HMM TIGR00885	gene	gene305	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0307
BFO_0308	BFO_0308		BFO_0308	330211	331350	+	cytidyltransferase-like protein	identified by match to protein family HMM PF01467%3B match to protein family HMM TIGR00125	gene	gene306	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0308
BFO_0309	BFO_0309	rfbA	rfbA	331355	332245	+	glucose-1-phosphate thymidylyltransferase	identified by match to protein family HMM PF00483%3B match to protein family HMM TIGR01207	gene	gene307	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0309
BFO_0310	BFO_0310		BFO_0310	332300	332461	+	hypothetical protein	identified by glimmer%3B putative	gene	gene308	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0310
BFO_0311	BFO_0311		BFO_0311	332492	333634	+	outer membrane protein 40	identified by match to protein family HMM PF00691	gene	gene309	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0311
BFO_0312	BFO_0312		BFO_0312	333734	336184	+	putative cytochrome c-type biogenesis protein CcsB	identified by match to protein family HMM PF01578	gene	gene310	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0312
BFO_0313	BFO_0313		BFO_0313	336174	338714	+	peptidase%2C S9A/B/C family%2C catalytic domain protein	identified by match to protein family HMM PF00326%3B match to protein family HMM PF02129	gene	gene311	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0313
BFO_0314	BFO_0314		BFO_0314	338773	339123	+	hypothetical protein		gene	gene312	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0314
BFO_0315	BFO_0315		BFO_0315	339116	341377	+	putative alpha-1%2C2-mannosidase	identified by match to protein family HMM PF07971%3B match to protein family HMM TIGR01180	gene	gene313	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0315
BFO_0316	BFO_0316		BFO_0316	341403	342275	+	hypothetical protein		gene	gene314	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0316
BFO_0317	BFO_0317		BFO_0317	342287	343609	-	MATE efflux family protein	identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797	gene	gene315	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0317
BFO_0318	BFO_0318	panD	panD	343682	344032	-	aspartate 1-decarboxylase	identified by match to protein family HMM PF02261%3B match to protein family HMM TIGR00223	gene	gene316	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0318
BFO_0319	BFO_0319	panC	panC	344054	345004	-	pantoate--beta-alanine ligase	identified by match to protein family HMM PF02569%3B match to protein family HMM TIGR00018	gene	gene317	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0319
BFO_0320	BFO_0320		BFO_0320	345028	345900	+	starch synthase catalytic domain protein	identified by match to protein family HMM PF08323	gene	gene318	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0320
BFO_0321	BFO_0321		BFO_0321	345902	347320	+	putative lipoprotein		gene	gene319	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0321
BFO_0322	BFO_0322		BFO_0322	347404	347556	-	hypothetical protein	identified by glimmer%3B putative	gene	gene320	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0322
BFO_0323	BFO_0323		BFO_0323	347629	347754	+	hypothetical protein	identified by glimmer%3B putative	gene	gene321	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0323
BFO_0324	BFO_0324		BFO_0324	348031	348633	+	hypothetical protein	identified by glimmer%3B putative	gene	gene322	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0324
BFO_0325	BFO_0325		BFO_0325	348657	348914	+	hypothetical protein		gene	gene323	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0325
BFO_0326	BFO_0326		BFO_0326	348951	350933	+	hypothetical protein	identified by glimmer%3B putative	gene	gene324	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0326
BFO_0327	BFO_0327		BFO_0327	350947	351738	+	hypothetical protein		gene	gene325	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0327
BFO_0328	BFO_0328		BFO_0328	351831	352385	+	death-on-curing family protein	identified by match to protein family HMM TIGR01550	gene	gene326	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0328
BFO_0329	BFO_0329		BFO_0329	352416	353336	+	hypothetical protein		gene	gene327	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0329
BFO_0330	BFO_0330		BFO_0330	353545	354750	+	putative membrane protein		gene	gene328	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0330
BFO_0331	BFO_0331		BFO_0331	354783	355562	+	polysaccharide deacetylase	identified by match to protein family HMM PF01522	gene	gene329	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0331
BFO_0332	BFO_0332		BFO_0332	355685	356044	+	transcriptional regulator%2C BlaI/MecI/CopY family	identified by match to protein family HMM PF03965	gene	gene330	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0332
BFO_0333	BFO_0333		BFO_0333	356051	357916	+	TonB-dependent receptor	identified by match to protein family HMM PF03544%3B match to protein family HMM PF05569%3B match to protein family HMM TIGR01352	gene	gene331	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0333
BFO_0334	BFO_0334		BFO_0334	357942	358091	-	hypothetical protein	identified by glimmer%3B putative	gene	gene332	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0334
BFO_0335	BFO_0335		BFO_0335	358100	358231	+	hypothetical protein	identified by glimmer%3B putative	gene	gene333	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0335
BFO_0336	BFO_0336		BFO_0336	358358	359179	+	putative serine O-acetyltransferase	identified by match to protein family HMM PF00132	gene	gene334	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0336
BFO_0337	BFO_0337	cysK	cysK	359246	360154	+	cysteine synthase A	identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR01136%3B match to protein family HMM TIGR01139	gene	gene335	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0337
BFO_0338	BFO_0338		BFO_0338	360293	360436	+	hypothetical protein	identified by glimmer%3B putative	gene	gene336	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0338
BFO_0339	BFO_0339		BFO_0339	360443	361579	+	putative lipoprotein		gene	gene337	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0339
BFO_0340	BFO_0340		BFO_0340	361754	362803	+	hypothetical protein		gene	gene338	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0340
BFO_0341	BFO_0341		BFO_0341	362881	363942	+	hypothetical protein		gene	gene339	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0341
BFO_0342	BFO_0342		BFO_0342	364225	366195	+	hypothetical protein		gene	gene340	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0342
BFO_0343	BFO_0343		BFO_0343	366296	366430	-	hypothetical protein		gene	gene341	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0343
BFO_0344	BFO_0344		BFO_0344	366436	366759	+	hypothetical protein	identified by glimmer%3B putative	gene	gene342	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0344
BFO_0345	BFO_0345		BFO_0345	366860	367897	+	hypothetical protein	identified by glimmer%3B putative	gene	gene343	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0345
BFO_0346	BFO_0346		BFO_0346	368040	368855	+	hypothetical protein		gene	gene344	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0346
BFO_0347	BFO_0347	lepB_1	lepB_1	368852	369739	+	signal peptidase I	identified by match to protein family HMM PF00717%3B match to protein family HMM TIGR02227	gene	gene345	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0347
BFO_0348	BFO_0348		BFO_0348	369853	369972	+	hypothetical protein	identified by glimmer%3B putative	gene	gene346	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0348
BFO_0349	BFO_0349		BFO_0349	370629	371762	+	hypothetical protein		gene	gene347	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0349
BFO_0350	BFO_0350		BFO_0350	371890	372657	-		transposase%2C IS4 family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01609	pseudogene	gene348	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0350
BFO_0351	BFO_0351		BFO_0351	372867	373151	+	hypothetical protein		gene	gene349	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0351
BFO_0352	BFO_0352		BFO_0352	373485	373706	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene350	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0352
BFO_0353	BFO_0353		BFO_0353	373815	373955	+	hypothetical protein	identified by glimmer%3B putative	gene	gene351	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0353
BFO_0354	BFO_0354		BFO_0354	373960	375366	+	hypothetical protein		gene	gene352	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0354
BFO_0355	BFO_0355		BFO_0355	375502	376569	+	hypothetical protein		gene	gene353	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0355
BFO_0356	BFO_0356		BFO_0356	376544	377689	+	hypothetical protein		gene	gene354	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0356
BFO_0357	BFO_0357		BFO_0357	377703	379370	+	O-antigen polymerase	identified by match to protein family HMM PF04932	gene	gene355	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0357
BFO_0358	BFO_0358		BFO_0358	379345	379479	+	hypothetical protein	identified by glimmer%3B putative	gene	gene356	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0358
BFO_0359	BFO_0359		BFO_0359	380237	380410	-	hypothetical protein	identified by glimmer%3B putative	gene	gene358	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0359
BFO_0360	BFO_0360		BFO_0360	379498	380247	+		putative signal peptidase I%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF00717	pseudogene	gene357	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0360
BFO_0361	BFO_0361		BFO_0361	380361	380477	+	hypothetical protein	identified by glimmer%3B putative	gene	gene359	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0361
BFO_0362	BFO_0362		BFO_0362	380784	380954	-	hypothetical protein	identified by glimmer%3B putative	gene	gene360	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0362
BFO_0363	BFO_0363		BFO_0363	381072	382184	+	hypothetical protein		gene	gene361	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0363
BFO_0364	BFO_0364		BFO_0364	382587	382739	-	hypothetical protein	identified by glimmer%3B putative	gene	gene362	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0364
BFO_0365	BFO_0365		BFO_0365	383204	384289	+	hypothetical protein		gene	gene363	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0365
BFO_0366	BFO_0366		BFO_0366	384446	384565	+	hypothetical protein	identified by glimmer%3B putative	gene	gene364	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0366
BFO_0367	BFO_0367		BFO_0367	384562	384810	+	hypothetical protein	identified by glimmer%3B putative	gene	gene365	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0367
BFO_0368	BFO_0368		BFO_0368	384927	385667	+		hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene366	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0368
BFO_0369	BFO_0369		BFO_0369	385668	386603	-	hypothetical protein		gene	gene367	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0369
BFO_0370	BFO_0370		BFO_0370	386739	386942	+	hypothetical protein	identified by glimmer%3B putative	gene	gene368	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0370
BFO_0371	BFO_0371		BFO_0371	387469	388494	+	putative lipoprotein		gene	gene369	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0371
BFO_0372	BFO_0372		BFO_0372	388607	389410	+	hypothetical protein	identified by match to protein family HMM PF07610	gene	gene370	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0372
BFO_0373	BFO_0373		BFO_0373	389417	391039	+	O-antigen polymerase	identified by match to protein family HMM PF04932	gene	gene371	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0373
BFO_0374	BFO_0374	lepB_2	lepB_2	391043	391936	+	signal peptidase I	identified by match to protein family HMM PF00717%3B match to protein family HMM TIGR02227	gene	gene372	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0374
BFO_0375	BFO_0375		BFO_0375	392015	393100	+	hypothetical protein		gene	gene373	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0375
BFO_0376	BFO_0376		BFO_0376	393239	394231	-	glycosyltransferase%2C group 2 family protein	identified by match to protein family HMM PF00535	gene	gene374	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0376
BFO_0377	BFO_0377		BFO_0377	394248	396398	-	hypothetical protein		gene	gene375	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0377
BFO_0378	BFO_0378		BFO_0378	396395	397756	-	hydrophobic domain protein	identified by match to protein family HMM PF04087	gene	gene376	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0378
BFO_0379	BFO_0379		BFO_0379	397756	399270	-	polysaccharide biosynthesis protein	identified by match to protein family HMM PF01943	gene	gene377	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0379
BFO_0380	BFO_0380	ruvB	ruvB	399276	400307	-	Holliday junction DNA helicase RuvB	identified by match to protein family HMM PF00004%3B match to protein family HMM PF00308%3B match to protein family HMM PF05491%3B match to protein family HMM PF05496%3B match to protein family HMM TIGR00635	gene	gene378	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0380
BFO_0381	BFO_0381		BFO_0381	400549	400722	-	hypothetical protein		gene	gene379	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0381
BFO_0382	BFO_0382		BFO_0382	400699	401805	+	efflux transporter%2C RND family%2C MFP subunit	identified by match to protein family HMM TIGR01730	gene	gene380	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0382
BFO_0383	BFO_0383		BFO_0383	401851	403017	+	hypothetical protein		gene	gene381	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0383
BFO_0384	BFO_0384		BFO_0384	403068	404519	+	hypothetical protein		gene	gene382	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0384
BFO_0385	BFO_0385		BFO_0385	404535	404981	+	hypothetical protein		gene	gene383	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0385
BFO_0386	BFO_0386		BFO_0386	404965	405141	+	hypothetical protein	identified by glimmer%3B putative	gene	gene384	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0386
BFO_0387	BFO_0387		BFO_0387	405154	408246	+	RND transporter%2C Hydrophobe/Amphiphile Efflux-1 (HAE1)/Heavy Metal Efflux (HME) family%2C permease protein	identified by match to protein family HMM PF00873	gene	gene385	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0387
BFO_0388	BFO_0388		BFO_0388	408256	409779	+	outer membrane efflux protein	identified by match to protein family HMM PF02321	gene	gene386	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0388
BFO_0389	BFO_0389		BFO_0389	409780	412968	+	putative membrane protein		gene	gene387	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0389
BFO_0390	BFO_0390		BFO_0390	413052	413897	+	TIGR01200 family protein		gene	gene388	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0390
BFO_0391	BFO_0391		BFO_0391	414037	415956	+	hypothetical protein		gene	gene389	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0391
BFO_0392	BFO_0392		BFO_0392	416131	416763	-	putative membrane protein	identified by match to protein family HMM PF03458	gene	gene390	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0392
BFO_0393	BFO_0393		BFO_0393	416844	417023	+	hypothetical protein	identified by glimmer%3B putative	gene	gene391	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0393
BFO_0394	BFO_0394		BFO_0394	417084	420320	+	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene392	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0394
BFO_0395	BFO_0395		BFO_0395	420353	422113	+	SusD family protein	identified by match to protein family HMM PF07980	gene	gene393	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0395
BFO_0396	BFO_0396		BFO_0396	422318	422797	-	YqeY-like protein	identified by match to protein family HMM PF09424	gene	gene394	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0396
BFO_0397	BFO_0397	ftsZ	ftsZ	422801	424174	-	cell division protein FtsZ	identified by match to protein family HMM PF00091%3B match to protein family HMM PF03953%3B match to protein family HMM TIGR00065	gene	gene395	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0397
BFO_0398	BFO_0398	ftsA	ftsA	424187	425509	-	cell division protein FtsA	identified by match to protein family HMM PF02491%3B match to protein family HMM TIGR01174	gene	gene396	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0398
BFO_0399	BFO_0399		BFO_0399	425514	426242	-	hypothetical protein		gene	gene397	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0399
BFO_0400	BFO_0400	murC	murC	426239	427618	-	UDP-N-acetylmuramate--L-alanine ligase	identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01082	gene	gene398	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0400
BFO_0401	BFO_0401		BFO_0401	427615	428520	-		glycosyltransferase family 28 C-terminal domain protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF04101	pseudogene	gene399	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0401
BFO_0402	BFO_0402		BFO_0402	428716	430020	-	cell cycle protein%2C FtsW/RodA/SpoVE family	identified by match to protein family HMM PF01098	gene	gene400	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0402
BFO_0403	BFO_0403	murD	murD	430034	431371	-	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	identified by match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01087	gene	gene401	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0403
BFO_0404	BFO_0404	mraY	mraY	431374	432639	-	phospho-N-acetylmuramoyl-pentapeptide-transferase	identified by match to protein family HMM PF00953%3B match to protein family HMM TIGR00445	gene	gene402	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0404
BFO_0405	BFO_0405	murE	murE	432647	434110	-	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase	identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01085	gene	gene403	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0405
BFO_0406	BFO_0406		BFO_0406	434123	436333	-	penicillin-binding protein%2C transpeptidase domain protein	identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717%3B match to protein family HMM PF03793	gene	gene404	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0406
BFO_0407	BFO_0407		BFO_0407	436340	436687	-	hypothetical protein		gene	gene405	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0407
BFO_0408	BFO_0408	mraW	mraW	436701	437615	-	S-adenosyl-methyltransferase MraW	identified by match to protein family HMM PF01795%3B match to protein family HMM TIGR00006	gene	gene406	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0408
BFO_0409	BFO_0409		BFO_0409	437881	438708	+	Acyltransferase	identified by match to protein family HMM PF01553	gene	gene407	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0409
BFO_0410	BFO_0410		BFO_0410	438713	439690	+	hemolysin		gene	gene408	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0410
BFO_0411	BFO_0411	rpiB	rpiB	439805	440248	-	ribose-5-phosphate isomerase B	identified by match to protein family HMM PF02502%3B match to protein family HMM TIGR00689%3B match to protein family HMM TIGR01120	gene	gene409	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0411
BFO_0412	BFO_0412		BFO_0412	440259	442292	-	Transketolase%2C thiamine pyrophosphate binding domain protein	identified by match to protein family HMM PF00456%3B match to protein family HMM PF02779%3B match to protein family HMM PF02780	gene	gene410	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0412
BFO_0413	BFO_0413		BFO_0413	442348	443841	-	succinate CoA transferase	identified by match to protein family HMM PF02550%3B match to protein family HMM TIGR03458	gene	gene411	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0413
BFO_0414	BFO_0414		BFO_0414	443902	444564	-	HAD hydrolase%2C family IA%2C variant 1	identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509%3B match to protein family HMM TIGR01549	gene	gene412	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0414
BFO_0415	BFO_0415		BFO_0415	444574	444717	-	hypothetical protein	identified by glimmer%3B putative	gene	gene413	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0415
BFO_0416	BFO_0416		BFO_0416	444802	444878	-	tRNA-Pro		tRNA	gene414	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0416
BFO_0417	BFO_0417		BFO_0417	445018	445149	-	hypothetical protein		gene	gene415	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0417
BFO_0418	BFO_0418		BFO_0418	445253	447376	-	TonB-dependent receptor plug domain protein	identified by match to protein family HMM PF07715	gene	gene416	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0418
BFO_0419	BFO_0419		BFO_0419	447373	448323	-	putative lipoprotein		gene	gene417	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0419
BFO_0420	BFO_0420		BFO_0420	448341	448973	-	hypothetical protein		gene	gene418	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0420
BFO_0421	BFO_0421		BFO_0421	448970	449305	-	hypothetical protein		gene	gene419	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0421
BFO_0422	BFO_0422		BFO_0422	449536	450903	+	hypothetical protein		gene	gene420	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0422
BFO_0423	BFO_0423		BFO_0423	451000	452610	+	outer membrane insertion signal domain protein	identified by match to protein family HMM PF03349	gene	gene421	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0423
BFO_0424	BFO_0424		BFO_0424	452825	453418	+	Sigma-70 region 2	identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937	gene	gene422	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0424
BFO_0425	BFO_0425		BFO_0425	453522	453701	+	hypothetical protein		gene	gene423	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0425
BFO_0426	BFO_0426	rpe	rpe	453814	454464	+	ribulose-phosphate 3-epimerase	identified by match to protein family HMM PF00834%3B match to protein family HMM TIGR01163	gene	gene424	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0426
BFO_0427	BFO_0427		BFO_0427	454488	455750	+	ComEC/Rec2-like protein	identified by match to protein family HMM PF03772%3B match to protein family HMM TIGR00360	gene	gene425	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0427
BFO_0428	BFO_0428		BFO_0428	455898	456758	-	putative RNA polymerase sigma factor RpoD	identified by match to protein family HMM PF00140%3B match to protein family HMM PF04539%3B match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM TIGR02937	gene	gene427	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0428
BFO_0429	BFO_0429		BFO_0429	455781	455906	+	hypothetical protein	identified by glimmer%3B putative	gene	gene426	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0429
BFO_0430	BFO_0430	degP	degP	456876	458375	-	peptidase Do	identified by match to protein family HMM PF00089%3B match to protein family HMM PF00595%3B match to protein family HMM TIGR02037	gene	gene428	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0430
BFO_0431	BFO_0431		BFO_0431	458650	460284	-	hypothetical protein		gene	gene429	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0431
BFO_0432	BFO_0432		BFO_0432	460303	462252	-	hypothetical protein		gene	gene430	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0432
BFO_0433	BFO_0433		BFO_0433	462470	463303	-	AP endonuclease%2C family 2	identified by match to protein family HMM PF01261	gene	gene431	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0433
BFO_0434	BFO_0434		BFO_0434	463266	463409	+	hypothetical protein	identified by glimmer%3B putative	gene	gene432	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0434
BFO_0435	BFO_0435		BFO_0435	463462	464313	-	hypothetical protein		gene	gene433	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0435
BFO_0436	BFO_0436		BFO_0436	464306	464422	+	hypothetical protein	identified by glimmer%3B putative	gene	gene434	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0436
BFO_0437	BFO_0437		BFO_0437	464467	465987	+	GMP synthase (glutamine-hydrolyzing)%2C C-terminal domain protein	identified by match to protein family HMM PF00117%3B match to protein family HMM PF00958%3B match to protein family HMM TIGR00884%3B match to protein family HMM TIGR00888	gene	gene435	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0437
BFO_0438	BFO_0438		BFO_0438	466006	466950	+	hypothetical protein	identified by match to protein family HMM PF02588	gene	gene436	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0438
BFO_0439	BFO_0439		BFO_0439	467088	467222	+	hypothetical protein	identified by glimmer%3B putative	gene	gene437	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0439
BFO_0440	BFO_0440		BFO_0440	467725	471081	+	repeat protein	identified by match to protein family HMM PF02415%3B match to protein family HMM TIGR02543	gene	gene438	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0440
BFO_0441	BFO_0441		BFO_0441	471208	472017	-	peptidase%2C M48 family	identified by match to protein family HMM PF01435	gene	gene439	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0441
BFO_0442	BFO_0442	gnd	gnd	472036	473487	-	phosphogluconate dehydrogenase (decarboxylating)	identified by match to protein family HMM PF00393%3B match to protein family HMM PF03446%3B match to protein family HMM TIGR00873	gene	gene440	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0442
BFO_0443	BFO_0443		BFO_0443	473619	474950	-	MATE efflux family protein	identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797	gene	gene441	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0443
BFO_0444	BFO_0444	pdxB	pdxB	474958	476136	-	4-phosphoerythronate dehydrogenase	identified by match to protein family HMM PF00389%3B match to protein family HMM PF02826	gene	gene442	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0444
BFO_0445	BFO_0445		BFO_0445	476241	476693	-	YhcH/YjgK/YiaL family protein	identified by match to protein family HMM PF04074%3B match to protein family HMM TIGR00022	gene	gene443	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0445
BFO_0446	BFO_0446		BFO_0446	476922	478241	-	TldD/PmbA family protein	identified by match to protein family HMM PF01523	gene	gene445	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0446
BFO_0447	BFO_0447		BFO_0447	476708	476935	+	hypothetical protein		gene	gene444	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0447
BFO_0448	BFO_0448		BFO_0448	478243	479781	-	Tat pathway signal sequence domain protein	identified by match to protein family HMM PF01523	gene	gene446	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0448
BFO_0449	BFO_0449		BFO_0449	479788	480537	+	hypothetical protein		gene	gene447	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0449
BFO_0450	BFO_0450		BFO_0450	480562	483951	+	putative beta-galactosidase	identified by match to protein family HMM PF00703%3B match to protein family HMM PF02836%3B match to protein family HMM PF02837%3B match to protein family HMM PF02929	gene	gene448	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0450
BFO_0451	BFO_0451	miaB	miaB	484067	485422	-	tRNA-i(6)A37 thiotransferase enzyme MiaB	identified by match to protein family HMM PF00919%3B match to protein family HMM PF01938%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR00089%3B match to protein family HMM TIGR01574	gene	gene449	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0451
BFO_0452	BFO_0452		BFO_0452	485918	487369	-	PA14 domain protein	identified by match to protein family HMM PF00149%3B match to protein family HMM PF07691	gene	gene450	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0452
BFO_0453	BFO_0453		BFO_0453	487382	488218	-	endonuclease/exonuclease/phosphatase family protein	identified by match to protein family HMM PF03372	gene	gene451	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0453
BFO_0454	BFO_0454		BFO_0454	488249	489001	-	Acyl-ACP thioesterase	identified by match to protein family HMM PF01643	gene	gene452	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0454
BFO_0455	BFO_0455		BFO_0455	489115	489663	-	hypothetical protein	identified by glimmer%3B putative	gene	gene453	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0455
BFO_0456	BFO_0456		BFO_0456	489937	490065	-	hypothetical protein	identified by glimmer%3B putative	gene	gene454	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0456
BFO_0457	BFO_0457	pgl	pgl	490116	490808	-	6-phosphogluconolactonase	identified by match to protein family HMM PF01182%3B match to protein family HMM TIGR01198	gene	gene455	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0457
BFO_0458	BFO_0458	zwf	zwf	490808	492343	-	glucose-6-phosphate dehydrogenase	identified by match to protein family HMM PF00479%3B match to protein family HMM PF02781%3B match to protein family HMM TIGR00871	gene	gene456	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0458
BFO_0459	BFO_0459		BFO_0459	492497	493855	-	outer membrane efflux protein	identified by match to protein family HMM PF02321	gene	gene458	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0459
BFO_0460	BFO_0460		BFO_0460	492342	492515	+	hypothetical protein	identified by glimmer%3B putative	gene	gene457	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0460
BFO_0461	BFO_0461		BFO_0461	493875	494993	-	efflux transporter%2C RND family%2C MFP subunit	identified by match to protein family HMM TIGR01730	gene	gene459	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0461
BFO_0462	BFO_0462		BFO_0462	495015	496271	-	efflux ABC transporter%2C permease protein	identified by match to protein family HMM PF02687	gene	gene460	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0462
BFO_0463	BFO_0463		BFO_0463	496286	497563	-	efflux ABC transporter%2C permease protein	identified by match to protein family HMM PF02687	gene	gene461	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0463
BFO_0464	BFO_0464		BFO_0464	497557	498225	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene462	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0464
BFO_0465	BFO_0465		BFO_0465	498251	498367	-	hypothetical protein	identified by glimmer%3B putative	gene	gene463	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0465
BFO_0466	BFO_0466		BFO_0466	498635	500569	-	alpha amylase%2C catalytic domain protein	identified by match to protein family HMM PF00128%3B match to protein family HMM PF09087	gene	gene464	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0466
BFO_0467	BFO_0467		BFO_0467	500734	501522	-	hypothetical protein		gene	gene465	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0467
BFO_0468	BFO_0468	pbpC	pbpC	502333	504648	-	penicillin-binding protein 1C	identified by match to protein family HMM PF00905%3B match to protein family HMM PF00912%3B match to protein family HMM PF06832%3B match to protein family HMM TIGR02073	gene	gene466	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0468
BFO_0469	BFO_0469		BFO_0469	504645	510158	-	alpha-2-macroglobulin family protein	identified by match to protein family HMM PF01835%3B match to protein family HMM PF07703	gene	gene467	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0469
BFO_0470	BFO_0470		BFO_0470	510393	510587	+	hypothetical protein	identified by glimmer%3B putative	gene	gene468	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0470
BFO_0471	BFO_0471	pyrE	pyrE	510584	511222	+	orotate phosphoribosyltransferase	identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR00336	gene	gene469	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0471
BFO_0472	BFO_0472		BFO_0472	511301	511675	+	hypothetical protein		gene	gene470	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0472
BFO_0473	BFO_0473	argH	argH	511681	513018	+	argininosuccinate lyase	identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00838	gene	gene471	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0473
BFO_0474	BFO_0474		BFO_0474	513015	513482	+	Rieske [2Fe-2S] domain protein	identified by match to protein family HMM PF00355	gene	gene472	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0474
BFO_0475	BFO_0475		BFO_0475	513630	514787	+	glycosyltransferase%2C group 1 family protein	identified by match to protein family HMM PF00534	gene	gene473	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0475
BFO_0476	BFO_0476	rnhA	rnhA	514791	515504	-	ribonuclease H		gene	gene474	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0476
BFO_0477	BFO_0477		BFO_0477	515524	515640	+	hypothetical protein	identified by glimmer%3B putative	gene	gene475	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0477
BFO_0478	BFO_0478		BFO_0478	515660	516766	+	antioxidant%2C AhpC/TSA family	identified by match to protein family HMM PF00578%3B match to protein family HMM PF08534	gene	gene476	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0478
BFO_0479	BFO_0479		BFO_0479	516793	517302	+	putative bifunctional adenosylcobalamin biosynthesis protein CobU	identified by match to protein family HMM PF02283	gene	gene477	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0479
BFO_0480	BFO_0480		BFO_0480	517328	517401	-	tRNA-Gln		tRNA	gene478	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0480
BFO_0481	BFO_0481	tyrS	tyrS	517474	518766	-	tyrosine--tRNA ligase	identified by match to protein family HMM PF00579%3B match to protein family HMM TIGR00234	gene	gene479	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0481
BFO_0482	BFO_0482	der	der	518903	520216	-	ribosome biogenesis GTPase Der	identified by match to protein family HMM PF01926%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR03594	gene	gene480	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0482
BFO_0483	BFO_0483		BFO_0483	520173	520289	+	hypothetical protein	identified by glimmer%3B putative	gene	gene481	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0483
BFO_0484	BFO_0484	era	era	520294	521187	-	ribosome biogenesis GTPase Era	identified by match to protein family HMM PF01926%3B match to protein family HMM PF07650%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00436	gene	gene482	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0484
BFO_0485	BFO_0485	fabHA_1	fabHA_1	521168	522175	-	beta-ketoacyl-acyl-carrier-protein synthase III	identified by match to protein family HMM PF08541%3B match to protein family HMM PF08545%3B match to protein family HMM TIGR00747	gene	gene483	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0485
BFO_0486	BFO_0486	rpmF	rpmF	522260	522379	-	ribosomal protein L32	identified by match to protein family HMM PF01783%3B match to protein family HMM TIGR01031	gene	gene484	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0486
BFO_0487	BFO_0487		BFO_0487	522467	523051	-	hypothetical protein		gene	gene485	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0487
BFO_0488	BFO_0488		BFO_0488	523018	523137	-	hypothetical protein		gene	gene486	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0488
BFO_0489	BFO_0489		BFO_0489	523202	525583	-	putative alpha-1%2C2-mannosidase	identified by match to protein family HMM PF07971%3B match to protein family HMM TIGR01180	gene	gene487	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0489
BFO_0490	BFO_0490		BFO_0490	525570	527051	-	hypothetical protein		gene	gene488	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0490
BFO_0491	BFO_0491		BFO_0491	527072	529951	-	Tat pathway signal sequence domain protein	identified by match to protein family HMM PF02837%3B match to protein family HMM TIGR01409	gene	gene489	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0491
BFO_0492	BFO_0492		BFO_0492	529985	533353	-	glycosyl hydrolase family 2%2C sugar binding domain protein	identified by match to protein family HMM PF02837	gene	gene490	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0492
BFO_0493	BFO_0493		BFO_0493	533547	535160	-	hypothetical protein		gene	gene491	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0493
BFO_0494	BFO_0494		BFO_0494	535181	537334	-		TonB-linked outer membrane protein%2C SusC/RagA family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00593%3B match to protein family HMM TIGR04056	pseudogene	gene492	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0494
BFO_0495	BFO_0495		BFO_0495	537310	538965	-	TonB-dependent receptor plug domain protein	identified by match to protein family HMM PF07660%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04057	gene	gene493	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0495
BFO_0496	BFO_0496		BFO_0496	539119	540150	-	sigma factor regulatory protein%2C FecR/PupR family	identified by match to protein family HMM PF04773	gene	gene494	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0496
BFO_0497	BFO_0497		BFO_0497	540312	542309	-	peptidase%2C S9A/B/C family%2C catalytic domain protein	identified by match to protein family HMM PF00326	gene	gene495	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0497
BFO_0498	BFO_0498		BFO_0498	542325	543815	-	SusD family protein	identified by match to protein family HMM PF07980	gene	gene496	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0498
BFO_0499	BFO_0499		BFO_0499	543843	547154	-	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene497	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0499
BFO_0500	BFO_0500		BFO_0500	547259	547441	+	hypothetical protein	identified by glimmer%3B putative	gene	gene498	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0500
BFO_0501	BFO_0501		BFO_0501	547671	548150	+	hypothetical protein	identified by glimmer%3B putative	gene	gene499	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0501
BFO_0502	BFO_0502		BFO_0502	548147	548794	+	hypothetical protein	identified by glimmer%3B putative	gene	gene500	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0502
BFO_0503	BFO_0503		BFO_0503	549181	549450	-		conserved hypothetical protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene501	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0503
BFO_0504	BFO_0504		BFO_0504	549471	549647	+	hypothetical protein		gene	gene502	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0504
BFO_0505	BFO_0505		BFO_0505	549813	550424	+	antioxidant%2C AhpC/TSA family	identified by match to protein family HMM PF00578%3B match to protein family HMM PF08534	gene	gene503	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0505
BFO_0506	BFO_0506		BFO_0506	550444	550722	+	hypothetical protein		gene	gene504	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0506
BFO_0507	BFO_0507	fsa	fsa	550927	551583	+	fructose-6-phosphate aldolase	identified by match to protein family HMM PF00923%3B match to protein family HMM TIGR00875	gene	gene505	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0507
BFO_0508	BFO_0508	ysxC	ysxC	551687	552295	+	ribosome biogenesis GTP-binding protein YsxC	identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR03598	gene	gene506	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0508
BFO_0509	BFO_0509		BFO_0509	553008	553205	-	hypothetical protein	identified by glimmer%3B putative	gene	gene508	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0509
BFO_0510	BFO_0510		BFO_0510	552308	553018	+	hypothetical protein		gene	gene507	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0510
BFO_0511	BFO_0511		BFO_0511	553209	553718	+	hypothetical protein		gene	gene509	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0511
BFO_0512	BFO_0512	trpS	trpS	553735	554727	+	tryptophan--tRNA ligase	identified by match to protein family HMM PF00579%3B match to protein family HMM TIGR00233	gene	gene510	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0512
BFO_0513	BFO_0513		BFO_0513	554795	555232	+	antibiotic biosynthesis monooxygenase	identified by match to protein family HMM PF03992	gene	gene511	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0513
BFO_0514	BFO_0514		BFO_0514	555391	555756	+	hypothetical protein		gene	gene512	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0514
BFO_0515	BFO_0515		BFO_0515	556061	557059	-	lactate/malate dehydrogenase%2C NAD binding domain protein	identified by match to protein family HMM PF00056%3B match to protein family HMM PF02866	gene	gene513	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0515
BFO_0516	BFO_0516		BFO_0516	557144	557266	+	hypothetical protein	identified by glimmer%3B putative	gene	gene514	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0516
BFO_0517	BFO_0517	dxs	dxs	557386	559314	+	1-deoxy-D-xylulose-5-phosphate synthase	identified by match to protein family HMM PF02779%3B match to protein family HMM PF02780%3B match to protein family HMM TIGR00204	gene	gene515	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0517
BFO_0518	BFO_0518		BFO_0518	559311	560651	+	TrkA N-terminal domain protein	identified by match to protein family HMM PF02080%3B match to protein family HMM PF02254	gene	gene516	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0518
BFO_0519	BFO_0519		BFO_0519	560658	562115	+	potassium uptake protein%2C TrkH family	identified by match to protein family HMM PF02386	gene	gene517	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0519
BFO_0520	BFO_0520		BFO_0520	562259	562693	-	hypothetical protein		gene	gene518	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0520
BFO_0521	BFO_0521		BFO_0521	562744	564906	-	TonB-dependent receptor	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715	gene	gene519	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0521
BFO_0522	BFO_0522		BFO_0522	565680	566033	-	hypothetical protein		gene	gene520	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0522
BFO_0523	BFO_0523		BFO_0523	566314	566832	+	ErfK/YbiS/YcfS/YnhG	identified by match to protein family HMM PF03734	gene	gene521	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0523
BFO_0524	BFO_0524		BFO_0524	566966	567097	+	hypothetical protein		gene	gene522	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0524
BFO_0525	BFO_0525		BFO_0525	567314	568687	+	hypothetical protein	identified by match to protein family HMM PF01637%3B match to protein family HMM PF03008	gene	gene523	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0525
BFO_0526	BFO_0526		BFO_0526	569837	569962	+	hypothetical protein	identified by glimmer%3B putative	gene	gene524	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0526
BFO_0527	BFO_0527		BFO_0527	570057	571490	+	transposase%2C IS4 family	identified by match to protein family HMM PF01609	gene	gene525	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0527
BFO_0528	BFO_0528		BFO_0528	572077	572202	+	toxin-antitoxin system%2C antitoxin component%2C Xre family		gene	gene526	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0528
BFO_0529	BFO_0529		BFO_0529	573431	573709	-	hypothetical protein		gene	gene528	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0529
BFO_0530	BFO_0530		BFO_0530	572206	573474	+	HipA-like C-terminal domain protein	identified by match to protein family HMM PF07804%3B match to protein family HMM PF07805	gene	gene527	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0530
BFO_0531	BFO_0531		BFO_0531	573687	573914	+	transcriptional regulator%2C y4mF family	identified by match to protein family HMM TIGR03070	gene	gene529	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0531
BFO_0532	BFO_0532		BFO_0532	573911	574246	+	HipA N-terminal domain protein	identified by match to protein family HMM TIGR03071	gene	gene530	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0532
BFO_0533	BFO_0533		BFO_0533	574236	575171	+	HipA-like C-terminal domain protein	identified by match to protein family HMM PF07804%3B match to protein family HMM PF07805	gene	gene531	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0533
BFO_0534	BFO_0534	trmE	trmE	575275	576684	-	tRNA modification GTPase TrmE	identified by match to protein family HMM PF01926%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00450	gene	gene532	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0534
BFO_0535	BFO_0535		BFO_0535	576767	577618	-	hypothetical protein	identified by match to protein family HMM PF07313	gene	gene533	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0535
BFO_0536	BFO_0536	uvrB	uvrB	577615	579648	-	excinuclease ABC%2C B subunit	identified by match to protein family HMM PF00271%3B match to protein family HMM PF02151%3B match to protein family HMM TIGR00631	gene	gene534	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0536
BFO_0537	BFO_0537		BFO_0537	579647	579799	+	hypothetical protein	identified by glimmer%3B putative	gene	gene535	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0537
BFO_0538	BFO_0538		BFO_0538	579874	581526	+	hypothetical protein	identified by match to protein family HMM PF02415	gene	gene536	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0538
BFO_0539	BFO_0539		BFO_0539	581647	582378	-	CutC family protein	identified by match to protein family HMM PF03932	gene	gene537	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0539
BFO_0540	BFO_0540		BFO_0540	582397	583710	-	nucleotide sugar dehydrogenase	identified by match to protein family HMM PF00984%3B match to protein family HMM PF03720%3B match to protein family HMM PF03721%3B match to protein family HMM TIGR03026	gene	gene538	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0540
BFO_0541	BFO_0541		BFO_0541	583727	583873	-	hypothetical protein	identified by glimmer%3B putative	gene	gene539	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0541
BFO_0542	BFO_0542		BFO_0542	583838	585169	+	hypothetical protein		gene	gene540	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0542
BFO_0543	BFO_0543		BFO_0543	585181	586446	+	putative membrane protein		gene	gene541	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0543
BFO_0544	BFO_0544		BFO_0544	586421	587608	+	glycosyltransferase%2C group 1 family protein	identified by match to protein family HMM PF00534	gene	gene542	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0544
BFO_0545	BFO_0545		BFO_0545	587598	588659	+	hypothetical protein		gene	gene543	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0545
BFO_0546	BFO_0546		BFO_0546	589763	590959	-	hypothetical protein		gene	gene545	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0546
BFO_0547	BFO_0547		BFO_0547	588656	589774	+	glycosyltransferase%2C group 1 family protein	identified by match to protein family HMM PF00534%3B match to protein family HMM PF09314	gene	gene544	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0547
BFO_0548	BFO_0548		BFO_0548	590968	591747	-	LICD family protein	identified by match to protein family HMM PF04991	gene	gene546	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0548
BFO_0549	BFO_0549		BFO_0549	591758	593164	-	polysaccharide biosynthesis protein	identified by match to protein family HMM PF01554%3B match to protein family HMM PF01943	gene	gene547	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0549
BFO_0550	BFO_0550		BFO_0550	593161	593910	-	glycerophosphodiester phosphodiesterase family protein	identified by match to protein family HMM PF03009	gene	gene548	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0550
BFO_0551	BFO_0551		BFO_0551	594000	595601	-	chain length determinant protein	identified by match to protein family HMM PF02706	gene	gene549	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0551
BFO_0552	BFO_0552		BFO_0552	595610	596419	-	polysaccharide biosynthesis/export protein	identified by match to protein family HMM PF02563	gene	gene550	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0552
BFO_0553	BFO_0553		BFO_0553	596733	597287	-	putative V-type sodium ATPase%2C K subunit	identified by match to protein family HMM PF00137	gene	gene551	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0553
BFO_0554	BFO_0554		BFO_0554	597247	599118	-	V-type ATPase 116kDa subunit family protein	identified by match to protein family HMM PF01496	gene	gene552	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0554
BFO_0555	BFO_0555		BFO_0555	599115	599735	-	V-type ATPase%2C D subunit	identified by match to protein family HMM TIGR00309	gene	gene553	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0555
BFO_0556	BFO_0556		BFO_0556	599767	601092	-	putative V-type sodium ATPase%2C B subunit	identified by match to protein family HMM PF00006%3B match to protein family HMM PF02874	gene	gene554	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0556
BFO_0557	BFO_0557		BFO_0557	601099	602856	-	putative V-type sodium ATPase%2C catalytic A subunit	identified by match to protein family HMM PF00006%3B match to protein family HMM PF02874	gene	gene555	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0557
BFO_0558	BFO_0558		BFO_0558	602860	603729	-	hypothetical protein		gene	gene556	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0558
BFO_0559	BFO_0559		BFO_0559	603729	604319	-	putative ATP synthase%2C subunit E		gene	gene557	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0559
BFO_0560	BFO_0560		BFO_0560	604433	604579	+	hypothetical protein	identified by glimmer%3B putative	gene	gene558	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0560
BFO_0561	BFO_0561		BFO_0561	604584	607745	+	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein	identified by match to protein family HMM PF02518%3B match to protein family HMM PF07494%3B match to protein family HMM PF07495%3B match to protein family HMM PF07730	gene	gene559	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0561
BFO_0562	BFO_0562		BFO_0562	607954	608595	+	response regulator receiver domain protein	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196	gene	gene560	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0562
BFO_0563	BFO_0563		BFO_0563	608734	608853	-	hypothetical protein	identified by glimmer%3B putative	gene	gene561	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0563
BFO_0564	BFO_0564		BFO_0564	608964	609116	+	hypothetical protein	identified by glimmer%3B putative	gene	gene562	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0564
BFO_0565	BFO_0565		BFO_0565	609961	611955	-	fibronectin type III domain protein	identified by match to protein family HMM PF00041	gene	gene563	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0565
BFO_0566	BFO_0566		BFO_0566	612091	612222	-	hypothetical protein	identified by glimmer%3B putative	gene	gene564	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0566
BFO_0567	BFO_0567		BFO_0567	612219	612920	-	GIY-YIG catalytic domain protein	identified by match to protein family HMM PF01541	gene	gene565	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0567
BFO_0568	BFO_0568		BFO_0568	612895	613044	-	hypothetical protein	identified by glimmer%3B putative	gene	gene566	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0568
BFO_0569	BFO_0569		BFO_0569	613019	613168	-	hypothetical protein	identified by glimmer%3B putative	gene	gene567	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0569
BFO_0570	BFO_0570		BFO_0570	613143	613301	-	hypothetical protein	identified by glimmer%3B putative	gene	gene568	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0570
BFO_0571	BFO_0571		BFO_0571	613745	622921	-	TIGR02542 family protein	identified by match to protein family HMM TIGR02542	gene	gene569	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0571
BFO_0572	BFO_0572		BFO_0572	623019	624719	-	hypothetical protein		gene	gene570	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0572
BFO_0573	BFO_0573		BFO_0573	625076	625210	-	hypothetical protein		gene	gene571	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0573
BFO_0574	BFO_0574		BFO_0574	625963	628443	-	bacterial group 2 Ig-like protein	identified by match to protein family HMM PF02368	gene	gene572	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0574
BFO_0575	BFO_0575		BFO_0575	629161	630963	-	bacterial group 2 Ig-like protein	identified by match to protein family HMM PF02368	gene	gene573	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0575
BFO_0576	BFO_0576		BFO_0576	631633	632211	-	hypothetical protein		gene	gene574	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0576
BFO_0577	BFO_0577		BFO_0577	632677	632934	-	hypothetical protein	identified by glimmer%3B putative	gene	gene575	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0577
BFO_0578	BFO_0578		BFO_0578	632955	633956	-	hypothetical protein		gene	gene576	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0578
BFO_0579	BFO_0579		BFO_0579	633999	635387	-	hypothetical protein	identified by glimmer%3B putative	gene	gene577	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0579
BFO_0580	BFO_0580		BFO_0580	635474	636112	-	hydrolase%2C TatD family	identified by match to protein family HMM PF01026	gene	gene578	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0580
BFO_0581	BFO_0581		BFO_0581	636132	636356	-	YidD family protein	identified by match to protein family HMM PF01809%3B match to protein family HMM TIGR00278	gene	gene579	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0581
BFO_0582	BFO_0582	rnpA	rnpA	636338	636751	-	ribonuclease P protein component		gene	gene580	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0582
BFO_0583	BFO_0583	hemD	hemD	636738	637514	-	uroporphyrinogen-III synthase	identified by match to protein family HMM PF02602	gene	gene581	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0583
BFO_0584	BFO_0584		BFO_0584	637505	638236	-	putative membrane protein		gene	gene582	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0584
BFO_0585	BFO_0585	nadB	nadB	638356	639924	+	L-aspartate oxidase	identified by match to protein family HMM PF00890%3B match to protein family HMM PF02910%3B match to protein family HMM TIGR00551	gene	gene583	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0585
BFO_0586	BFO_0586		BFO_0586	639959	640546	+	RNA polymerase sigma-70 factor	identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937%3B match to protein family HMM TIGR02985	gene	gene584	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0586
BFO_0587	BFO_0587		BFO_0587	640621	641616	+	sigma factor regulatory protein%2C FecR/PupR family	identified by match to protein family HMM PF04773	gene	gene585	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0587
BFO_0588	BFO_0588		BFO_0588	641737	645114	+	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene586	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0588
BFO_0589	BFO_0589		BFO_0589	645129	646643	+	SusD family protein	identified by match to protein family HMM PF07980	gene	gene587	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0589
BFO_0590	BFO_0590		BFO_0590	646721	648538	+	hypothetical protein		gene	gene588	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0590
BFO_0591	BFO_0591		BFO_0591	648811	649032	-	hypothetical protein		gene	gene589	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0591
BFO_0592	BFO_0592		BFO_0592	649141	649263	+	hypothetical protein	identified by glimmer%3B putative	gene	gene590	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0592
BFO_0593	BFO_0593	sulP	sulP	649451	651163	+	sulfate permease	identified by match to protein family HMM PF00860%3B match to protein family HMM PF00916%3B match to protein family HMM PF01740%3B match to protein family HMM TIGR00815	gene	gene591	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0593
BFO_0594	BFO_0594	prfB	prfB	651412	652374	+	peptide chain release factor 2	identified by match to protein family HMM PF00472%3B match to protein family HMM PF03462	gene	gene592	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0594
BFO_0595	BFO_0595		BFO_0595	652418	653497	+	hypothetical protein		gene	gene593	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0595
BFO_0596	BFO_0596		BFO_0596	653833	653946	+		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene594	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0596
BFO_0597	BFO_0597		BFO_0597	653961	655256	-	HipA-like C-terminal domain protein	identified by match to protein family HMM PF07804%3B match to protein family HMM PF07805	gene	gene595	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0597
BFO_0598	BFO_0598		BFO_0598	655924	656187	-	hypothetical protein		gene	gene596	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0598
BFO_0599	BFO_0599		BFO_0599	656301	656447	+	hypothetical protein	identified by glimmer%3B putative	gene	gene597	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0599
BFO_0600	BFO_0600		BFO_0600	656475	656550	-	tRNA-Gly		tRNA	gene598	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0600
BFO_0601	BFO_0601		BFO_0601	656612	656694	-	tRNA-Tyr		tRNA	gene599	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0601
BFO_0602	BFO_0602	ribH	ribH	656722	657225	-	6%2C7-dimethyl-8-ribityllumazine synthase	identified by match to protein family HMM PF00885%3B match to protein family HMM TIGR00114	gene	gene600	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0602
BFO_0603	BFO_0603		BFO_0603	657228	657920	-	tetratricopeptide repeat protein		gene	gene601	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0603
BFO_0604	BFO_0604	recF	recF	658070	659173	+	DNA replication and repair protein RecF	identified by match to protein family HMM PF02463%3B match to protein family HMM TIGR00611	gene	gene602	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0604
BFO_0605	BFO_0605		BFO_0605	659170	659463	+	hypothetical protein		gene	gene603	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0605
BFO_0606	BFO_0606		BFO_0606	659472	660029	-	5-formyltetrahydrofolate cyclo-ligase	identified by match to protein family HMM PF01812%3B match to protein family HMM TIGR02727	gene	gene604	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0606
BFO_0607	BFO_0607		BFO_0607	660026	661639	-	peptidase%2C S41 family	identified by match to protein family HMM PF00595%3B match to protein family HMM PF03572%3B match to protein family HMM TIGR00225	gene	gene605	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0607
BFO_0608	BFO_0608		BFO_0608	661666	662109	-	putative dCMP deaminase	identified by match to protein family HMM PF00383	gene	gene606	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0608
BFO_0609	BFO_0609	nadD	nadD	662190	662795	-	nicotinate-nucleotide adenylyltransferase	identified by match to protein family HMM PF01467%3B match to protein family HMM TIGR00125%3B match to protein family HMM TIGR00482	gene	gene607	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0609
BFO_0610	BFO_0610	gmk	gmk	662835	663401	-	guanylate kinase	identified by match to protein family HMM PF00625%3B match to protein family HMM TIGR03263	gene	gene608	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0610
BFO_0611	BFO_0611		BFO_0611	663401	664273	-	TIGR00255-like family protein	identified by match to protein family HMM PF03755%3B match to protein family HMM PF08340%3B match to protein family HMM TIGR00255	gene	gene609	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0611
BFO_0612	BFO_0612		BFO_0612	664270	664395	-	hypothetical protein	identified by glimmer%3B putative	gene	gene610	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0612
BFO_0613	BFO_0613		BFO_0613	664436	664615	+	hypothetical protein		gene	gene611	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0613
BFO_0614	BFO_0614		BFO_0614	664796	665875	-	relaxase/mobilization nuclease domain protein	identified by match to protein family HMM PF03432	gene	gene612	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0614
BFO_0615	BFO_0615		BFO_0615	665865	666230	-	hypothetical protein		gene	gene613	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0615
BFO_0616	BFO_0616		BFO_0616	666634	667053	-	hypothetical protein		gene	gene614	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0616
BFO_0617	BFO_0617		BFO_0617	667071	668045	-	hypothetical protein		gene	gene615	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0617
BFO_0618	BFO_0618		BFO_0618	668227	669528	-	Virulence-associated protein E		gene	gene616	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0618
BFO_0619	BFO_0619		BFO_0619	669608	669778	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene617	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0619
BFO_0620	BFO_0620		BFO_0620	669920	670114	+	hypothetical protein		gene	gene618	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0620
BFO_0621	BFO_0621		BFO_0621	670142	670432	+	DNA binding domain protein%2C excisionase family	overlaps another CDS with the same product name	gene	gene619	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0621
BFO_0622	BFO_0622		BFO_0622	670432	670722	+	DNA binding domain protein%2C excisionase family	overlaps another CDS with the same product name	gene	gene620	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0622
BFO_0623	BFO_0623	vsr	vsr	670795	671292	+	DNA mismatch endonuclease Vsr	identified by match to protein family HMM PF03852%3B match to protein family HMM TIGR00632	gene	gene621	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0623
BFO_0624	BFO_0624		BFO_0624	671922	672035	-	hypothetical protein	identified by glimmer%3B putative	gene	gene622	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0624
BFO_0625	BFO_0625		BFO_0625	672042	674405	-	hypothetical protein		gene	gene623	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0625
BFO_0626	BFO_0626		BFO_0626	674402	675409	-	hypothetical protein		gene	gene624	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0626
BFO_0627	BFO_0627		BFO_0627	675399	678200	-	hypothetical protein		gene	gene625	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0627
BFO_0628	BFO_0628		BFO_0628	678201	679667	-	ATPase family protein		gene	gene626	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0628
BFO_0629	BFO_0629		BFO_0629	679674	679823	-	hypothetical protein		gene	gene627	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0629
BFO_0630	BFO_0630		BFO_0630	679865	680014	-	hypothetical protein	identified by glimmer%3B putative	gene	gene628	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0630
BFO_0631	BFO_0631		BFO_0631	680183	681448	-	putative modification methylase HaeIII	identified by match to protein family HMM PF00145%3B match to protein family HMM TIGR00675	gene	gene629	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0631
BFO_0632	BFO_0632		BFO_0632	682178	682306	+	hypothetical protein	identified by glimmer%3B putative	gene	gene630	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0632
BFO_0633	BFO_0633		BFO_0633	682412	682816	-	hypothetical protein		gene	gene631	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0633
BFO_0634	BFO_0634		BFO_0634	682813	684057	-	site-specific recombinase%2C phage integrase family	identified by match to protein family HMM PF00589	gene	gene632	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0634
BFO_0635	BFO_0635		BFO_0635	684070	685284	-	site-specific recombinase%2C phage integrase family	identified by match to protein family HMM PF00589	gene	gene633	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0635
BFO_0636	BFO_0636	rrfA	rrfA	685766	685876	-	5S ribosomal RNA		rRNA	gene634	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0636
BFO_0637	BFO_0637	rrlA	rrlA	686088	688916	-	23S ribosomal RNA		rRNA	gene635	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0637
BFO_0638	BFO_0638		BFO_0638	689050	689181	+	hypothetical protein	identified by glimmer%3B putative	gene	gene636	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0638
BFO_0639	BFO_0639		BFO_0639	689205	689281	-	tRNA-Ala		tRNA	gene637	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0639
BFO_0640	BFO_0640		BFO_0640	689364	689437	-	tRNA-Ile		tRNA	gene638	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0640
BFO_0641	BFO_0641	rrsA	rrsA	689695	691145	-	16S ribosomal RNA		rRNA	gene639	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0641
BFO_0642	BFO_0642		BFO_0642	692053	693735	-	AMP-binding enzyme	identified by match to protein family HMM PF00501	gene	gene640	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0642
BFO_0643	BFO_0643	yqeV	yqeV	693892	695205	+	tRNA methylthiotransferase YqeV	identified by match to protein family HMM PF00919%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR00089%3B match to protein family HMM TIGR01579	gene	gene641	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0643
BFO_0644	BFO_0644		BFO_0644	695202	696107	+	lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase	identified by match to protein family HMM PF03279	gene	gene642	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0644
BFO_0645	BFO_0645		BFO_0645	696316	697353	+	glycosyltransferase%2C group 2 family protein	identified by match to protein family HMM PF00535	gene	gene643	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0645
BFO_0646	BFO_0646		BFO_0646	697419	697532	-	hypothetical protein	identified by glimmer%3B putative	gene	gene644	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0646
BFO_0647	BFO_0647		BFO_0647	697560	697637	-	tRNA-Val		tRNA	gene645	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0647
BFO_0648	BFO_0648		BFO_0648	697957	698157	+	hypothetical protein	identified by glimmer%3B putative	gene	gene646	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0648
BFO_0649	BFO_0649		BFO_0649	698839	699975	-	PspC domain protein	identified by match to protein family HMM PF04024	gene	gene647	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0649
BFO_0650	BFO_0650		BFO_0650	699988	700317	-	transcriptional regulator%2C PadR family	identified by match to protein family HMM PF03551	gene	gene648	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0650
BFO_0651	BFO_0651		BFO_0651	700457	701455	+	ABC 3 transport family protein	identified by match to protein family HMM PF00950	gene	gene649	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0651
BFO_0652	BFO_0652		BFO_0652	701538	701906	+	TIGR00252 family protein	identified by match to protein family HMM PF02021%3B match to protein family HMM TIGR00252	gene	gene650	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0652
BFO_0653	BFO_0653		BFO_0653	701925	702278	+	hypothetical protein	identified by match to protein family HMM PF04237	gene	gene651	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0653
BFO_0654	BFO_0654		BFO_0654	702268	703011	+	biotin--[acetyl-CoA-carboxylase] ligase	identified by match to protein family HMM PF03099%3B match to protein family HMM TIGR00121	gene	gene652	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0654
BFO_0655	BFO_0655		BFO_0655	703136	706315	+	glycosyl hydrolase family 2%2C sugar binding domain protein	identified by match to protein family HMM PF02837	gene	gene653	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0655
BFO_0656	BFO_0656	atpG	atpG	706340	707200	-	ATP synthase F1%2C gamma subunit	identified by match to protein family HMM PF00231%3B match to protein family HMM TIGR01146	gene	gene654	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0656
BFO_0657	BFO_0657	atpA	atpA	707229	708830	-	ATP synthase F1%2C alpha subunit	identified by match to protein family HMM PF00006%3B match to protein family HMM PF00306%3B match to protein family HMM PF02874%3B match to protein family HMM PF09378%3B match to protein family HMM TIGR00962	gene	gene655	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0657
BFO_0658	BFO_0658	atpH	atpH	708854	709432	-	ATP synthase F1%2C delta subunit	identified by match to protein family HMM PF00213%3B match to protein family HMM TIGR01145	gene	gene656	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0658
BFO_0659	BFO_0659	atpF	atpF	709500	709994	-	ATP synthase F0%2C B subunit	identified by match to protein family HMM PF00430%3B match to protein family HMM TIGR01144	gene	gene657	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0659
BFO_0660	BFO_0660	atpE	atpE	710012	710263	-	ATP synthase F0%2C C subunit	identified by match to protein family HMM PF00137%3B match to protein family HMM TIGR01260	gene	gene658	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0660
BFO_0661	BFO_0661	atpB	atpB	710304	711353	-	ATP synthase F0%2C A subunit	identified by match to protein family HMM PF00119%3B match to protein family HMM TIGR01131	gene	gene659	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0661
BFO_0662	BFO_0662		BFO_0662	711376	711834	-	hypothetical protein		gene	gene660	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0662
BFO_0663	BFO_0663		BFO_0663	711845	712090	-	ATP synthase%2C delta/epsilon subunit%2C beta-sandwich domain protein	identified by match to protein family HMM PF02823	gene	gene661	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0663
BFO_0664	BFO_0664	atpD	atpD	712095	713618	-	ATP synthase F1%2C beta subunit	identified by match to protein family HMM PF00006%3B match to protein family HMM PF00306%3B match to protein family HMM PF02874%3B match to protein family HMM TIGR01039	gene	gene662	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0664
BFO_0665	BFO_0665		BFO_0665	713871	715178	-	peptidase%2C S41 family	identified by match to protein family HMM PF03572	gene	gene663	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0665
BFO_0666	BFO_0666		BFO_0666	715225	716016	-	hypothetical protein		gene	gene664	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0666
BFO_0667	BFO_0667	prfC	prfC	716089	717666	-	peptide chain release factor 3	identified by match to protein family HMM PF00009%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00503	gene	gene665	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0667
BFO_0668	BFO_0668	rfbD	rfbD	717678	718541	-	dTDP-4-dehydrorhamnose reductase	identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993%3B match to protein family HMM TIGR01214	gene	gene666	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0668
BFO_0669	BFO_0669		BFO_0669	718561	719208	-	hypothetical protein		gene	gene667	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0669
BFO_0670	BFO_0670		BFO_0670	719186	720043	+	metallo-beta-lactamase domain protein	identified by match to protein family HMM PF00753	gene	gene668	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0670
BFO_0671	BFO_0671		BFO_0671	720170	723028	-	peptidase M16 inactive domain protein	identified by match to protein family HMM PF00675%3B match to protein family HMM PF05193	gene	gene669	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0671
BFO_0672	BFO_0672		BFO_0672	723025	723186	-	hypothetical protein	identified by glimmer%3B putative	gene	gene670	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0672
BFO_0673	BFO_0673		BFO_0673	723194	724765	-	putative alginate O-acetyltransferase AlgI	identified by match to protein family HMM PF03062	gene	gene671	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0673
BFO_0674	BFO_0674		BFO_0674	724762	726153	-	hypothetical protein		gene	gene672	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0674
BFO_0675	BFO_0675		BFO_0675	726128	727546	-	hypothetical protein		gene	gene673	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0675
BFO_0676	BFO_0676		BFO_0676	727845	729314	+	hypothetical protein	identified by match to protein family HMM PF06824	gene	gene674	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0676
BFO_0677	BFO_0677	dnaK	dnaK	729514	731421	+	chaperone protein DnaK	identified by match to protein family HMM PF00012%3B match to protein family HMM TIGR02350	gene	gene675	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0677
BFO_0678	BFO_0678		BFO_0678	731770	732186	+	mobilizable transposon%2C TnpA family protein		gene	gene676	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0678
BFO_0679	BFO_0679		BFO_0679	732199	733467	+	site-specific recombinase%2C phage integrase family	identified by match to protein family HMM PF00589	gene	gene677	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0679
BFO_0680	BFO_0680		BFO_0680	733464	734132	+	hypothetical protein		gene	gene678	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0680
BFO_0681	BFO_0681		BFO_0681	734266	735069	-	methyltransferase domain protein	identified by match to protein family HMM PF08242	gene	gene679	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0681
BFO_0682	BFO_0682		BFO_0682	735267	738992	-	hypothetical protein		gene	gene680	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0682
BFO_0683	BFO_0683		BFO_0683	739299	739655	+	DNA binding domain protein%2C excisionase family		gene	gene681	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0683
BFO_0684	BFO_0684		BFO_0684	739670	740875	+	Virulence-associated protein E		gene	gene682	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0684
BFO_0685	BFO_0685		BFO_0685	741106	741993	+	hypothetical protein		gene	gene683	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0685
BFO_0686	BFO_0686		BFO_0686	742074	742190	+	hypothetical protein		gene	gene684	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0686
BFO_0687	BFO_0687		BFO_0687	742354	742482	+	hypothetical protein		gene	gene685	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0687
BFO_0688	BFO_0688		BFO_0688	742472	743413	+	relaxase/mobilization nuclease domain protein	identified by match to protein family HMM PF03432	gene	gene686	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0688
BFO_0689	BFO_0689		BFO_0689	743454	744161	+	hypothetical protein		gene	gene687	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0689
BFO_0690	BFO_0690		BFO_0690	744279	744485	+	DNA-binding helix-turn-helix protein	identified by match to protein family HMM PF01381	gene	gene688	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0690
BFO_0691	BFO_0691		BFO_0691	744497	744775	+	hypothetical protein		gene	gene689	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0691
BFO_0692	BFO_0692		BFO_0692	744872	748369	+	hypothetical protein		gene	gene690	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0692
BFO_0693	BFO_0693		BFO_0693	748641	748796	+	hypothetical protein		gene	gene691	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0693
BFO_0694	BFO_0694		BFO_0694	748793	750037	+	phosphorylase family	identified by match to protein family HMM PF01048	gene	gene692	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0694
BFO_0695	BFO_0695		BFO_0695	749991	751112	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene693	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0695
BFO_0696	BFO_0696		BFO_0696	751210	751782	+	hypothetical protein		gene	gene694	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0696
BFO_0697	BFO_0697		BFO_0697	752225	752410	+		conserved domain protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene695	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0697
BFO_0698	BFO_0698		BFO_0698	752549	752824	+		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene696	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0698
BFO_0699	BFO_0699		BFO_0699	752845	755172	+	glycosyl hydrolase family 3%2C C-terminal domain protein	identified by match to protein family HMM PF00933%3B match to protein family HMM PF01915	gene	gene697	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0699
BFO_0700	BFO_0700		BFO_0700	756216	756338	-	hypothetical protein	identified by glimmer%3B putative	gene	gene699	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0700
BFO_0701	BFO_0701		BFO_0701	755169	756224	+	BNR/Asp-box repeat protein	identified by match to protein family HMM PF02012	gene	gene698	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0701
BFO_0702	BFO_0702		BFO_0702	756902	757372	+	hypothetical protein		gene	gene700	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0702
BFO_0703	BFO_0703		BFO_0703	757401	759902	+	thermolysin metallopeptidase%2C catalytic domain protein	identified by match to protein family HMM PF01447%3B match to protein family HMM PF02868	gene	gene701	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0703
BFO_0704	BFO_0704		BFO_0704	760216	760407	-	hypothetical protein	identified by glimmer%3B putative	gene	gene702	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0704
BFO_0705	BFO_0705	mutS	mutS	760582	763194	+	DNA mismatch repair protein MutS	identified by match to protein family HMM PF00488%3B match to protein family HMM PF01624%3B match to protein family HMM PF05188%3B match to protein family HMM PF05190%3B match to protein family HMM PF05192%3B match to protein family HMM TIGR01070	gene	gene703	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0705
BFO_0706	BFO_0706		BFO_0706	763194	764180	+	SMP-30/Gluconolaconase/LRE-like region	identified by match to protein family HMM PF08450	gene	gene704	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0706
BFO_0707	BFO_0707	rnr	rnr	764170	766368	+	ribonuclease R	identified by match to protein family HMM PF00575%3B match to protein family HMM PF00773%3B match to protein family HMM PF08206%3B match to protein family HMM TIGR00358%3B match to protein family HMM TIGR02063	gene	gene705	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0707
BFO_0708	BFO_0708		BFO_0708	766453	767046	-	hypothetical protein		gene	gene706	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0708
BFO_0709	BFO_0709	gpmI	gpmI	767148	768719	-	2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase	identified by match to protein family HMM PF01676%3B match to protein family HMM PF06415%3B match to protein family HMM TIGR01307	gene	gene707	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0709
BFO_0710	BFO_0710		BFO_0710	768784	771168	-	hypothetical protein		gene	gene708	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0710
BFO_0711	BFO_0711		BFO_0711	771270	774029	-	alpha-L-rhamnosidase N-terminal domain protein	identified by match to protein family HMM PF05592%3B match to protein family HMM PF08531	gene	gene709	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0711
BFO_0712	BFO_0712		BFO_0712	774064	774570	-	nitroreductase family protein	identified by match to protein family HMM PF00881	gene	gene710	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0712
BFO_0713	BFO_0713		BFO_0713	774737	774874	+	hypothetical protein	identified by glimmer%3B putative	gene	gene711	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0713
BFO_0714	BFO_0714		BFO_0714	774972	775045	+	tRNA-Met		tRNA	gene712	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0714
BFO_0715	BFO_0715		BFO_0715	775085	775285	-	hypothetical protein	identified by glimmer%3B putative	gene	gene713	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0715
BFO_0716	BFO_0716		BFO_0716	775314	776045	+	putative cell division ATP-binding protein FtsE	identified by match to protein family HMM PF00005	gene	gene714	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0716
BFO_0717	BFO_0717		BFO_0717	776087	777418	+	amino acid kinase family	identified by match to protein family HMM PF00696%3B match to protein family HMM TIGR00657	gene	gene715	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0717
BFO_0718	BFO_0718	lysA	lysA	777447	778607	+	diaminopimelate decarboxylase	identified by match to protein family HMM PF00278%3B match to protein family HMM PF02784%3B match to protein family HMM TIGR01048	gene	gene716	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0718
BFO_0719	BFO_0719		BFO_0719	778789	779142	-	sporulation and cell division repeat protein	identified by match to protein family HMM PF05036	gene	gene717	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0719
BFO_0720	BFO_0720		BFO_0720	779174	779296	+	hypothetical protein	identified by glimmer%3B putative	gene	gene718	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0720
BFO_0721	BFO_0721		BFO_0721	779330	782815	-	PBS lyase HEAT-like repeat protein	identified by match to protein family HMM PF02985%3B match to protein family HMM PF03130%3B match to protein family HMM PF06439	gene	gene719	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0721
BFO_0722	BFO_0722		BFO_0722	782901	784157	-	Tat pathway signal sequence domain protein	identified by match to protein family HMM PF01408%3B match to protein family HMM TIGR01409	gene	gene720	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0722
BFO_0723	BFO_0723		BFO_0723	784611	788006	+	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene721	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0723
BFO_0724	BFO_0724		BFO_0724	788015	789646	+	SusD family protein	identified by match to protein family HMM PF07980	gene	gene722	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0724
BFO_0725	BFO_0725		BFO_0725	789760	791304	+	arylsulfatase	identified by match to protein family HMM PF00884	gene	gene723	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0725
BFO_0726	BFO_0726		BFO_0726	791419	791832	-	hypothetical protein		gene	gene724	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0726
BFO_0727	BFO_0727		BFO_0727	791831	792013	+	hypothetical protein		gene	gene725	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0727
BFO_0728	BFO_0728		BFO_0728	792078	795542	-	hypothetical protein	identified by match to protein family HMM PF02415	gene	gene726	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0728
BFO_0729	BFO_0729		BFO_0729	795903	799385	-	tetratricopeptide repeat protein		gene	gene727	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0729
BFO_0730	BFO_0730		BFO_0730	799482	800606	-	acyltransferase family protein		gene	gene728	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0730
BFO_0731	BFO_0731		BFO_0731	800596	801915	-	hypothetical protein		gene	gene729	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0731
BFO_0732	BFO_0732		BFO_0732	801928	802299	-	hypothetical protein	identified by glimmer%3B putative	gene	gene730	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0732
BFO_0733	BFO_0733		BFO_0733	802303	803850	-	phenylalanine and histidine ammonia-lyase	identified by match to protein family HMM PF00221	gene	gene731	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0733
BFO_0734	BFO_0734		BFO_0734	803882	803955	-	tRNA-Met		tRNA	gene732	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0734
BFO_0735	BFO_0735		BFO_0735	805332	806363	-	YcaO-like family	identified by match to protein family HMM PF02624	gene	gene733	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0735
BFO_0736	BFO_0736		BFO_0736	806469	808460	-	TonB-dependent receptor plug domain protein	identified by match to protein family HMM PF07715	gene	gene734	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0736
BFO_0737	BFO_0737		BFO_0737	808628	808786	-	hypothetical protein	identified by glimmer%3B putative	gene	gene735	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0737
BFO_0738	BFO_0738		BFO_0738	809656	810450	-	transcriptional regulator%2C LuxR family	identified by match to protein family HMM PF00196	gene	gene736	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0738
BFO_0739	BFO_0739		BFO_0739	810630	810869	-	hypothetical protein	identified by glimmer%3B putative	gene	gene737	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0739
BFO_0740	BFO_0740		BFO_0740	811009	813693	+	DNA gyrase/topoisomerase IV%2C A subunit	identified by match to protein family HMM PF00521	gene	gene738	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0740
BFO_0741	BFO_0741		BFO_0741	813714	814547	+	hypothetical protein		gene	gene739	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0741
BFO_0742	BFO_0742		BFO_0742	814551	815567	+	peptidase%2C S41 family	identified by match to protein family HMM PF03572	gene	gene740	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0742
BFO_0743	BFO_0743		BFO_0743	815704	815853	-	hypothetical protein	identified by glimmer%3B putative	gene	gene741	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0743
BFO_0744	BFO_0744	soj	soj	815855	816619	+	sporulation initiation inhibitor protein Soj	identified by match to protein family HMM PF01656	gene	gene742	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0744
BFO_0745	BFO_0745		BFO_0745	816623	817525	+	ParB-like protein	identified by match to protein family HMM PF02195%3B match to protein family HMM TIGR00180	gene	gene743	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0745
BFO_0746	BFO_0746		BFO_0746	817567	818244	+	hypothetical protein		gene	gene744	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0746
BFO_0747	BFO_0747		BFO_0747	818249	819844	+	LysM domain protein	identified by match to protein family HMM PF01464%3B match to protein family HMM PF01476	gene	gene745	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0747
BFO_0748	BFO_0748		BFO_0748	819858	822113	+	putative guanosine 3'%2C5'-bis(pyrophosphate) 3'-pyrophosphohydrolase	identified by match to protein family HMM PF01966%3B match to protein family HMM PF02824%3B match to protein family HMM PF04607%3B match to protein family HMM TIGR00691	gene	gene746	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0748
BFO_0749	BFO_0749		BFO_0749	822599	822724	-	hypothetical protein	identified by glimmer%3B putative	gene	gene747	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0749
BFO_0750	BFO_0750		BFO_0750	822809	822931	-	hypothetical protein	identified by glimmer%3B putative	gene	gene748	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0750
BFO_0751	BFO_0751		BFO_0751	822979	823107	-	hypothetical protein	identified by glimmer%3B putative	gene	gene749	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0751
BFO_0752	BFO_0752		BFO_0752	823180	824178	-	K+-dependent Na+/Ca+ exchanger family protein	identified by match to protein family HMM PF01699%3B match to protein family HMM TIGR00367	gene	gene750	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0752
BFO_0753	BFO_0753		BFO_0753	824183	824545	-	transcriptional regulator%2C MerR family	identified by match to protein family HMM PF00376	gene	gene751	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0753
BFO_0754	BFO_0754		BFO_0754	824553	825536	-	peptidase%2C M23 family	identified by match to protein family HMM PF01551	gene	gene752	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0754
BFO_0755	BFO_0755	alaS	alaS	825635	828265	+	alanine--tRNA ligase	identified by match to protein family HMM PF01411%3B match to protein family HMM PF02272%3B match to protein family HMM PF07973%3B match to protein family HMM TIGR00344	gene	gene753	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0755
BFO_0756	BFO_0756		BFO_0756	829300	829533	-	hypothetical protein		gene	gene755	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0756
BFO_0757	BFO_0757	aroB	aroB	828269	829324	+	3-dehydroquinate synthase	identified by match to protein family HMM PF01761%3B match to protein family HMM TIGR01357	gene	gene754	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0757
BFO_0758	BFO_0758		BFO_0758	829848	831188	+	transposase%2C IS4 family	identified by match to protein family HMM PF01609	gene	gene756	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0758
BFO_0759	BFO_0759		BFO_0759	831446	832336	-		transposase%2C IS4 family%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene757	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0759
BFO_0760	BFO_0760	lgt_1	lgt_1	832432	833307	+	prolipoprotein diacylglyceryl transferase	identified by match to protein family HMM PF01790%3B match to protein family HMM TIGR00544	gene	gene758	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0760
BFO_0761	BFO_0761		BFO_0761	833713	834102	-	hypothetical protein		gene	gene759	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0761
BFO_0762	BFO_0762		BFO_0762	834200	835543	-	putative cerebroside-sulfatase	identified by match to protein family HMM PF00884	gene	gene760	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0762
BFO_0763	BFO_0763		BFO_0763	835515	835784	+	hypothetical protein		gene	gene761	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0763
BFO_0764	BFO_0764		BFO_0764	835781	835900	+	hypothetical protein	identified by glimmer%3B putative	gene	gene762	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0764
BFO_0765	BFO_0765	nagA	nagA	835912	837318	+	alpha-N-acetylgalactosaminidase	identified by match to protein family HMM PF01408%3B match to protein family HMM TIGR01409	gene	gene763	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0765
BFO_0766	BFO_0766	hutU	hutU	837437	839425	+	urocanate hydratase	identified by match to protein family HMM PF01175%3B match to protein family HMM TIGR01228	gene	gene764	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0766
BFO_0767	BFO_0767		BFO_0767	839430	840440	+	hypothetical protein		gene	gene765	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0767
BFO_0768	BFO_0768		BFO_0768	840489	840794	+	hypothetical protein		gene	gene766	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0768
BFO_0769	BFO_0769		BFO_0769	840824	843748	+	hypothetical protein		gene	gene767	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0769
BFO_0770	BFO_0770	ftcD	ftcD	843891	844787	+	glutamate formimidoyltransferase	identified by match to protein family HMM PF02971%3B match to protein family HMM PF07837%3B match to protein family HMM TIGR02024	gene	gene768	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0770
BFO_0771	BFO_0771	hutI	hutI	844846	846084	+	imidazolonepropionase	identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969%3B match to protein family HMM TIGR01224	gene	gene769	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0771
BFO_0772	BFO_0772		BFO_0772	846185	846565	+	TIGR02436 family protein	identified by match to protein family HMM TIGR02436	gene	gene770	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0772
BFO_0773	BFO_0773		BFO_0773	846627	847256	+	putative methenyltetrahydrofolate cyclohydrolase	identified by match to protein family HMM PF04961	gene	gene771	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0773
BFO_0774	BFO_0774	hutH	hutH	847271	848770	+	histidine ammonia-lyase	identified by match to protein family HMM PF00221%3B match to protein family HMM TIGR01225	gene	gene772	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0774
BFO_0775	BFO_0775		BFO_0775	848916	849125	+	hypothetical protein		gene	gene773	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0775
BFO_0776	BFO_0776		BFO_0776	849154	850005	+	TIGR01200 family protein	identified by match to protein family HMM PF09697	gene	gene774	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0776
BFO_0777	BFO_0777		BFO_0777	850192	852819	+	hypothetical protein		gene	gene775	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0777
BFO_0778	BFO_0778		BFO_0778	852996	853904	+	virulence factor B family protein		gene	gene776	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0778
BFO_0779	BFO_0779		BFO_0779	854001	854993	-	putative lipoprotein		gene	gene777	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0779
BFO_0780	BFO_0780		BFO_0780	855057	855227	+	hypothetical protein	identified by glimmer%3B putative	gene	gene778	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0780
BFO_0781	BFO_0781		BFO_0781	855240	856019	+	acid phosphatase	identified by match to protein family HMM PF01569	gene	gene779	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0781
BFO_0782	BFO_0782		BFO_0782	856033	857181	+	phosphate-selective porin O and P	identified by match to protein family HMM PF07396	gene	gene780	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0782
BFO_0783	BFO_0783		BFO_0783	857230	858516	+	putative glucose-1-phosphatase	identified by match to protein family HMM PF00328	gene	gene781	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0783
BFO_0784	BFO_0784		BFO_0784	858520	859104	-	hypothetical protein		gene	gene782	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0784
BFO_0785	BFO_0785		BFO_0785	859142	859306	-	hypothetical protein	identified by glimmer%3B putative	gene	gene783	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0785
BFO_0786	BFO_0786		BFO_0786	859269	859916	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene784	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0786
BFO_0787	BFO_0787		BFO_0787	859913	861271	+	Sodium:neurotransmitter symporter family protein	identified by match to protein family HMM PF00209	gene	gene785	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0787
BFO_0788	BFO_0788	mro_1	mro_1	861589	862710	-	aldose 1-epimerase	identified by match to protein family HMM PF01263	gene	gene786	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0788
BFO_0789	BFO_0789		BFO_0789	862789	862932	+	hypothetical protein	identified by glimmer%3B putative	gene	gene787	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0789
BFO_0790	BFO_0790	nadA	nadA	863062	863994	+	quinolinate synthetase complex%2C A subunit	identified by match to protein family HMM PF02445%3B match to protein family HMM TIGR00550	gene	gene788	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0790
BFO_0791	BFO_0791		BFO_0791	864009	866951	+	hypothetical protein	identified by match to protein family HMM PF07494%3B match to protein family HMM PF07495	gene	gene789	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0791
BFO_0792	BFO_0792		BFO_0792	866990	868369	+	tetratricopeptide repeat protein	identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719	gene	gene790	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0792
BFO_0793	BFO_0793		BFO_0793	868433	869107	+	TIGR02453 family protein	identified by match to protein family HMM PF09365%3B match to protein family HMM TIGR02453	gene	gene791	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0793
BFO_0794	BFO_0794		BFO_0794	869104	869820	+	hypothetical protein		gene	gene792	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0794
BFO_0795	BFO_0795		BFO_0795	869875	870654	-	putative lipoprotein		gene	gene793	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0795
BFO_0796	BFO_0796		BFO_0796	870695	871327	-	hypothetical protein	identified by glimmer%3B putative	gene	gene794	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0796
BFO_0797	BFO_0797		BFO_0797	871407	871571	-	hypothetical protein	identified by glimmer%3B putative	gene	gene795	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0797
BFO_0798	BFO_0798		BFO_0798	871733	872125	+	acyl-CoA thioester hydrolase%2C YbgC/YbaW family	identified by match to protein family HMM PF03061	gene	gene796	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0798
BFO_0799	BFO_0799	dprA	dprA	872148	873260	+	DNA protecting protein DprA	identified by match to protein family HMM PF02481%3B match to protein family HMM TIGR00732	gene	gene797	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0799
BFO_0800	BFO_0800		BFO_0800	873267	875006	+	arylsulfatase	identified by match to protein family HMM PF00884	gene	gene798	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0800
BFO_0801	BFO_0801		BFO_0801	875300	875476	+	hypothetical protein	identified by glimmer%3B putative	gene	gene799	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0801
BFO_0802	BFO_0802		BFO_0802	875473	876834	+	pyridoxal-phosphate dependent TrpB-like enzyme	identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR01415	gene	gene800	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0802
BFO_0803	BFO_0803	msrB	msrB	876968	877993	+	methionine-R-sulfoxide reductase	identified by match to protein family HMM PF01625%3B match to protein family HMM PF01641%3B match to protein family HMM TIGR00357%3B match to protein family HMM TIGR00401	gene	gene801	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0803
BFO_0804	BFO_0804		BFO_0804	878102	879370	+	putative DNA modification/repair radical SAM protein	identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR03916	gene	gene802	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0804
BFO_0805	BFO_0805		BFO_0805	879381	880142	+	putative DNA metabolism protein	identified by match to protein family HMM TIGR03915	gene	gene803	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0805
BFO_0806	BFO_0806		BFO_0806	880205	880372	+	hypothetical protein	identified by glimmer%3B putative	gene	gene804	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0806
BFO_0807	BFO_0807		BFO_0807	880420	880674	+	hypothetical protein	identified by glimmer%3B putative	gene	gene805	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0807
BFO_0808	BFO_0808		BFO_0808	880741	881451	-	putative membrane protein		gene	gene806	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0808
BFO_0809	BFO_0809		BFO_0809	881455	886140	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF00873	gene	gene807	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0809
BFO_0810	BFO_0810		BFO_0810	886137	889223	-	RND transporter%2C Hydrophobe/Amphiphile Efflux-1 (HAE1)/Heavy Metal Efflux (HME) family%2C permease protein	identified by match to protein family HMM PF00873	gene	gene808	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0810
BFO_0811	BFO_0811		BFO_0811	889275	890342	-	efflux transporter%2C RND family%2C MFP subunit	identified by match to protein family HMM TIGR01730	gene	gene809	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0811
BFO_0812	BFO_0812		BFO_0812	890373	891884	-	outer membrane efflux protein	identified by match to protein family HMM PF02321	gene	gene810	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0812
BFO_0813	BFO_0813		BFO_0813	891927	895286	-	putative membrane protein		gene	gene811	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0813
BFO_0814	BFO_0814		BFO_0814	895311	896207	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene812	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0814
BFO_0815	BFO_0815		BFO_0815	896352	897323	-	phosphomannose isomerase type I	identified by match to protein family HMM PF01238	gene	gene813	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0815
BFO_0816	BFO_0816		BFO_0816	897407	899509	-	1%2C4-alpha-glucan-branching enzyme	identified by match to protein family HMM PF00128%3B match to protein family HMM PF02806%3B match to protein family HMM PF02922	gene	gene814	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0816
BFO_0817	BFO_0817		BFO_0817	899643	899792	-	hypothetical protein	identified by glimmer%3B putative	gene	gene815	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0817
BFO_0818	BFO_0818		BFO_0818	899823	900089	-	hypothetical protein		gene	gene816	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0818
BFO_0819	BFO_0819	leuA	leuA	900142	901629	+	2-isopropylmalate synthase	identified by match to protein family HMM PF00682%3B match to protein family HMM PF08502%3B match to protein family HMM TIGR00973	gene	gene817	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0819
BFO_0820	BFO_0820	leuC	leuC	901665	903101	+	3-isopropylmalate dehydratase%2C large subunit	identified by match to protein family HMM PF00330%3B match to protein family HMM TIGR00170	gene	gene818	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0820
BFO_0821	BFO_0821		BFO_0821	903142	903603	+	hypothetical protein		gene	gene819	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0821
BFO_0822	BFO_0822	leuD	leuD	903609	904202	+	3-isopropylmalate dehydratase%2C small subunit	identified by match to protein family HMM PF00694%3B match to protein family HMM TIGR00171	gene	gene820	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0822
BFO_0823	BFO_0823		BFO_0823	904297	905877	+	HMGL-like protein	identified by match to protein family HMM PF00682%3B match to protein family HMM PF08502	gene	gene821	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0823
BFO_0824	BFO_0824	leuB	leuB	905938	907011	+	3-isopropylmalate dehydrogenase	identified by match to protein family HMM PF00180%3B match to protein family HMM TIGR00169	gene	gene822	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0824
BFO_0825	BFO_0825		BFO_0825	907148	907221	-	tRNA-Arg		tRNA	gene823	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0825
BFO_0826	BFO_0826		BFO_0826	907308	908159	-	hypothetical protein		gene	gene824	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0826
BFO_0827	BFO_0827		BFO_0827	908254	910605	-	outer membrane protein%2C OMP85 family	identified by match to protein family HMM PF01103	gene	gene825	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0827
BFO_0828	BFO_0828		BFO_0828	910681	911445	+	RNA methyltransferase%2C TrmH family	identified by match to protein family HMM PF00588	gene	gene826	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0828
BFO_0829	BFO_0829		BFO_0829	911823	911957	+	hypothetical protein	identified by glimmer%3B putative	gene	gene827	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0829
BFO_0830	BFO_0830		BFO_0830	912124	912399	+	hypothetical protein	identified by glimmer%3B putative	gene	gene828	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0830
BFO_0831	BFO_0831		BFO_0831	913004	914116	+	transposase%2C IS4 family	identified by match to protein family HMM PF01609	gene	gene829	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0831
BFO_0832	BFO_0832		BFO_0832	914915	915040	+	hypothetical protein	identified by glimmer%3B putative	gene	gene830	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0832
BFO_0833	BFO_0833		BFO_0833	915611	918889	+	bacterial group 2 Ig-like protein	identified by match to protein family HMM PF02368	gene	gene831	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0833
BFO_0834	BFO_0834		BFO_0834	919500	919712	-	hypothetical protein	identified by glimmer%3B putative	gene	gene832	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0834
BFO_0835	BFO_0835		BFO_0835	920166	920366	+	hypothetical protein		gene	gene833	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0835
BFO_0836	BFO_0836		BFO_0836	920366	920644	+	addiction module toxin%2C RelE/StbE family	identified by match to protein family HMM PF05016%3B match to protein family HMM TIGR02385	gene	gene834	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0836
BFO_0837	BFO_0837		BFO_0837	921316	923610	-	transporter%2C CPA2 family	identified by match to protein family HMM PF00999	gene	gene835	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0837
BFO_0838	BFO_0838	metH	metH	923692	927381	+	methionine synthase	identified by match to protein family HMM PF00809%3B match to protein family HMM PF02310%3B match to protein family HMM PF02574%3B match to protein family HMM PF02607%3B match to protein family HMM PF02965%3B match to protein family HMM TIGR02082	gene	gene836	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0838
BFO_0839	BFO_0839		BFO_0839	927417	929243	-	peptidase%2C U32 family	identified by match to protein family HMM PF01136	gene	gene837	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0839
BFO_0840	BFO_0840	metA	metA	929244	930191	-	homoserine O-succinyltransferase	identified by match to protein family HMM PF04204%3B match to protein family HMM TIGR01001	gene	gene838	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0840
BFO_0841	BFO_0841		BFO_0841	930243	931505	-	competence/damage-inducible protein CinA N-terminal domain protein	identified by match to protein family HMM PF00994%3B match to protein family HMM PF02464%3B match to protein family HMM TIGR00177%3B match to protein family HMM TIGR00199%3B match to protein family HMM TIGR00200	gene	gene839	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0841
BFO_0842	BFO_0842		BFO_0842	931526	932554	-	putative glycoprotease GCP	identified by match to protein family HMM PF00814%3B match to protein family HMM TIGR00329%3B match to protein family HMM TIGR03723	gene	gene840	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0842
BFO_0843	BFO_0843		BFO_0843	932746	937116	+	hypothetical protein		gene	gene841	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0843
BFO_0844	BFO_0844		BFO_0844	937140	937865	-	hypothetical protein		gene	gene842	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0844
BFO_0845	BFO_0845		BFO_0845	937870	938436	-	flavin reductase-like protein	identified by match to protein family HMM PF01613	gene	gene843	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0845
BFO_0846	BFO_0846	pyrI	pyrI	938485	938952	-	aspartate carbamoyltransferase%2C regulatory subunit	identified by match to protein family HMM PF01948%3B match to protein family HMM PF02748%3B match to protein family HMM TIGR00240	gene	gene844	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0846
BFO_0847	BFO_0847	pyrB	pyrB	938965	939897	-	aspartate carbamoyltransferase	identified by match to protein family HMM PF00185%3B match to protein family HMM PF02729%3B match to protein family HMM TIGR00670	gene	gene845	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0847
BFO_0848	BFO_0848		BFO_0848	939994	940731	-	peptidase%2C S54 family	identified by match to protein family HMM PF01694	gene	gene846	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0848
BFO_0849	BFO_0849		BFO_0849	940801	940920	+	hypothetical protein	identified by glimmer%3B putative	gene	gene847	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0849
BFO_0850	BFO_0850		BFO_0850	940889	941011	+	hypothetical protein	identified by glimmer%3B putative	gene	gene848	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0850
BFO_0851	BFO_0851		BFO_0851	941146	941301	+	hypothetical protein	identified by glimmer%3B putative	gene	gene849	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0851
BFO_0852	BFO_0852		BFO_0852	941323	941484	+	ribosomal peptide natural product small molecule		gene	gene850	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0852
BFO_0853	BFO_0853		BFO_0853	941597	943054	+	radical SAM domain protein	identified by match to protein family HMM PF04055	gene	gene851	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0853
BFO_0854	BFO_0854		BFO_0854	943066	944232	+	hypothetical protein		gene	gene852	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0854
BFO_0855	BFO_0855		BFO_0855	944327	945106	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene853	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0855
BFO_0856	BFO_0856		BFO_0856	945061	945264	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene854	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0856
BFO_0857	BFO_0857		BFO_0857	945239	946312	+		conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene855	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0857
BFO_0858	BFO_0858		BFO_0858	946386	946541	+	hypothetical protein	identified by glimmer%3B putative	gene	gene856	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0858
BFO_0859	BFO_0859		BFO_0859	947054	947251	+	hypothetical protein	identified by glimmer%3B putative	gene	gene857	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0859
BFO_0860	BFO_0860		BFO_0860	947307	949511	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664%3B match to protein family HMM PF03412	gene	gene858	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0860
BFO_0861	BFO_0861		BFO_0861	949522	950835	+	hypothetical protein		gene	gene859	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0861
BFO_0862	BFO_0862		BFO_0862	950837	951538	+	hypothetical protein		gene	gene860	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0862
BFO_0863	BFO_0863		BFO_0863	951529	952293	+	hypothetical protein		gene	gene861	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0863
BFO_0864	BFO_0864		BFO_0864	952557	952754	+		conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene862	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0864
BFO_0865	BFO_0865		BFO_0865	953189	953365	+	hypothetical protein		gene	gene863	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0865
BFO_0866	BFO_0866		BFO_0866	953338	955746	+	efflux ABC transporter%2C permease protein	identified by match to protein family HMM PF02687	gene	gene864	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0866
BFO_0867	BFO_0867		BFO_0867	955773	955925	-	hypothetical protein	identified by glimmer%3B putative	gene	gene865	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0867
BFO_0868	BFO_0868		BFO_0868	956237	956359	-	hypothetical protein	identified by glimmer%3B putative	gene	gene866	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0868
BFO_0869	BFO_0869		BFO_0869	956420	956701	-		conserved domain protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene867	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0869
BFO_0870	BFO_0870		BFO_0870	956764	957795	+	hypothetical protein		gene	gene868	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0870
BFO_0871	BFO_0871		BFO_0871	957792	958565	+	hypothetical protein		gene	gene869	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0871
BFO_0872	BFO_0872		BFO_0872	958586	959293	-	putative lipoprotein		gene	gene870	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0872
BFO_0873	BFO_0873		BFO_0873	960023	960160	+	hypothetical protein	identified by glimmer%3B putative	gene	gene871	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0873
BFO_0874	BFO_0874		BFO_0874	960111	961451	+	hypothetical protein		gene	gene872	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0874
BFO_0875	BFO_0875		BFO_0875	961497	963041	+	GH3 auxin-responsive promoter	identified by match to protein family HMM PF03321	gene	gene873	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0875
BFO_0876	BFO_0876		BFO_0876	963075	963497	-	hypothetical protein		gene	gene874	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0876
BFO_0877	BFO_0877		BFO_0877	963717	964259	+	Sigma-70 region 2	identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937	gene	gene875	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0877
BFO_0878	BFO_0878		BFO_0878	964256	964825	+	hypothetical protein	overlaps another CDS with the same product name	gene	gene876	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0878
BFO_0879	BFO_0879		BFO_0879	964822	965793	+	hypothetical protein	overlaps another CDS with the same product name	gene	gene877	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0879
BFO_0880	BFO_0880		BFO_0880	966163	967152	-	hypothetical protein	identified by glimmer%3B putative	gene	gene878	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0880
BFO_0881	BFO_0881		BFO_0881	967139	969037	-		conserved domain protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene879	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0881
BFO_0882	BFO_0882		BFO_0882	969041	969502	-		hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene880	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0882
BFO_0883	BFO_0883		BFO_0883	969513	970010	-	hypothetical protein		gene	gene881	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0883
BFO_0884	BFO_0884		BFO_0884	970125	970622	-	hypothetical protein		gene	gene883	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0884
BFO_0885	BFO_0885		BFO_0885	970013	970141	+	hypothetical protein	identified by glimmer%3B putative	gene	gene882	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0885
BFO_0886	BFO_0886		BFO_0886	970632	971684	-	hypothetical protein		gene	gene884	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0886
BFO_0887	BFO_0887		BFO_0887	972036	974807	+	peptidase%2C S9A/B/C family%2C catalytic domain protein	identified by match to protein family HMM PF00326	gene	gene885	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0887
BFO_0888	BFO_0888		BFO_0888	974892	975470	+	RNA polymerase sigma-70 factor	identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937%3B match to protein family HMM TIGR02985	gene	gene886	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0888
BFO_0889	BFO_0889		BFO_0889	975544	976515	+	sigma factor regulatory protein%2C FecR/PupR family	identified by match to protein family HMM PF04773	gene	gene887	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0889
BFO_0890	BFO_0890		BFO_0890	976641	979229	-	hypothetical protein		gene	gene889	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0890
BFO_0891	BFO_0891		BFO_0891	976522	976656	+	hypothetical protein	identified by glimmer%3B putative	gene	gene888	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0891
BFO_0892	BFO_0892		BFO_0892	979241	980125	-	TIGR01200 family protein	identified by match to protein family HMM PF09697	gene	gene890	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0892
BFO_0893	BFO_0893		BFO_0893	980166	980324	-	hypothetical protein		gene	gene891	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0893
BFO_0894	BFO_0894		BFO_0894	980298	981755	+	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein	identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518	gene	gene892	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0894
BFO_0895	BFO_0895		BFO_0895	981752	982435	+	putative transcriptional regulatory protein RprY	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene893	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0895
BFO_0896	BFO_0896		BFO_0896	982706	982945	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene894	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0896
BFO_0897	BFO_0897		BFO_0897	982944	983060	+	hypothetical protein	identified by glimmer%3B putative	gene	gene895	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0897
BFO_0898	BFO_0898		BFO_0898	983508	983654	+	hypothetical protein		gene	gene896	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0898
BFO_0899	BFO_0899		BFO_0899	983732	984346	+	hypothetical protein		gene	gene897	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0899
BFO_0900	BFO_0900		BFO_0900	984356	985417	+	heptosyltransferase	identified by match to protein family HMM PF01075	gene	gene898	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0900
BFO_0901	BFO_0901	cobC	cobC	985469	985996	-	alpha-ribazole phosphatase	identified by match to protein family HMM PF00300%3B match to protein family HMM TIGR03162	gene	gene899	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0901
BFO_0902	BFO_0902	cobS	cobS	985981	986772	-	cobalamin-5-phosphate synthase	identified by match to protein family HMM PF02654	gene	gene900	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0902
BFO_0903	BFO_0903	cobT	cobT	986775	987815	-	nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	identified by match to protein family HMM PF02277%3B match to protein family HMM TIGR03160	gene	gene901	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0903
BFO_0904	BFO_0904		BFO_0904	987917	988630	-	hypothetical protein		gene	gene902	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0904
BFO_0905	BFO_0905		BFO_0905	988747	989340	+	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene903	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0905
BFO_0906	BFO_0906		BFO_0906	989337	990356	+	hypothetical protein		gene	gene904	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0906
BFO_0907	BFO_0907	npdA	npdA	990497	991189	+	NAD-dependent deacetylase	identified by match to protein family HMM PF02146	gene	gene905	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0907
BFO_0908	BFO_0908		BFO_0908	991304	992602	-	hypothetical protein		gene	gene906	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0908
BFO_0909	BFO_0909		BFO_0909	992638	992802	-	hypothetical protein	identified by glimmer%3B putative	gene	gene907	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0909
BFO_0910	BFO_0910		BFO_0910	992774	992944	+	hypothetical protein	identified by glimmer%3B putative	gene	gene908	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0910
BFO_0911	BFO_0911		BFO_0911	993096	994748	-	putative membrane protein		gene	gene909	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0911
BFO_0912	BFO_0912		BFO_0912	994792	994935	-		hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene910	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0912
BFO_0913	BFO_0913		BFO_0913	995033	995626	-	HAD hydrolase%2C family IB	identified by match to protein family HMM TIGR01488%3B match to protein family HMM TIGR01490	gene	gene911	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0913
BFO_0914	BFO_0914		BFO_0914	995631	996524	-	prenyltransferase%2C UbiA family	identified by match to protein family HMM PF01040	gene	gene912	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0914
BFO_0915	BFO_0915		BFO_0915	996750	996863	-	hypothetical protein	identified by glimmer%3B putative	gene	gene913	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0915
BFO_0916	BFO_0916		BFO_0916	997189	997347	-	hypothetical protein	identified by glimmer%3B putative	gene	gene915	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0916
BFO_0917	BFO_0917		BFO_0917	997086	997217	+	hypothetical protein	identified by glimmer%3B putative	gene	gene914	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0917
BFO_0918	BFO_0918		BFO_0918	997364	997801	+	hypothetical protein		gene	gene916	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0918
BFO_0919	BFO_0919		BFO_0919	997814	998302	+	Sigma-70 region 2	identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937	gene	gene917	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0919
BFO_0920	BFO_0920		BFO_0920	998306	998824	+	hypothetical protein		gene	gene918	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0920
BFO_0921	BFO_0921		BFO_0921	998826	999314	+	hypothetical protein		gene	gene919	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0921
BFO_0922	BFO_0922		BFO_0922	999359	1000903	+	PglZ domain protein	identified by match to protein family HMM PF00072%3B match to protein family HMM PF08665	gene	gene920	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0922
BFO_0923	BFO_0923	degT	degT	1001316	1002449	-	pleiotropic regulatory protein DegT	identified by match to protein family HMM PF01041	gene	gene922	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0923
BFO_0924	BFO_0924		BFO_0924	1000900	1001322	+	hydrolase%2C P-loop family	identified by match to protein family HMM PF02367%3B match to protein family HMM TIGR00150	gene	gene921	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0924
BFO_0925	BFO_0925	metG	metG	1002449	1004581	-	methionine--tRNA ligase	identified by match to protein family HMM PF01588%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00398%3B match to protein family HMM TIGR00399	gene	gene923	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0925
BFO_0926	BFO_0926		BFO_0926	1004776	1006578	-	putative cold-shock DEAD-box protein A	identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF03880	gene	gene924	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0926
BFO_0927	BFO_0927		BFO_0927	1006542	1006709	+	hypothetical protein		gene	gene925	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0927
BFO_0928	BFO_0928		BFO_0928	1006758	1007009	-	hypothetical protein		gene	gene926	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0928
BFO_0929	BFO_0929		BFO_0929	1007250	1008284	-	toxin-antitoxin system%2C toxin component%2C Fic family		gene	gene927	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0929
BFO_0930	BFO_0930		BFO_0930	1008491	1008904	-	hypothetical protein	identified by glimmer%3B putative	gene	gene928	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0930
BFO_0931	BFO_0931		BFO_0931	1008927	1009040	-	hypothetical protein	identified by glimmer%3B putative	gene	gene929	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0931
BFO_0932	BFO_0932		BFO_0932	1009073	1009651	-	putative lipoprotein		gene	gene930	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0932
BFO_0933	BFO_0933		BFO_0933	1009727	1011418	-	tetratricopeptide repeat protein		gene	gene931	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0933
BFO_0934	BFO_0934		BFO_0934	1011651	1012883	+	putative 3-phosphoshikimate 1-carboxyvinyltransferase	identified by match to protein family HMM PF00275	gene	gene932	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0934
BFO_0935	BFO_0935		BFO_0935	1012906	1013346	+	hypothetical protein		gene	gene933	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0935
BFO_0936	BFO_0936	pckA	pckA	1013573	1015165	+	phosphoenolpyruvate carboxykinase (ATP)	identified by match to protein family HMM PF01293%3B match to protein family HMM TIGR00224	gene	gene934	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0936
BFO_0937	BFO_0937		BFO_0937	1015290	1016006	-	DNA alkylation repair enzyme	identified by match to protein family HMM PF08713	gene	gene935	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0937
BFO_0938	BFO_0938		BFO_0938	1016003	1016974	-	glyoxylate reductase	identified by match to protein family HMM PF00389%3B match to protein family HMM PF02826	gene	gene936	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0938
BFO_0939	BFO_0939		BFO_0939	1017066	1018301	+	transporter gate domain protein	identified by match to protein family HMM PF07670	gene	gene937	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0939
BFO_0940	BFO_0940		BFO_0940	1018716	1019468	-	hypothetical protein	identified by glimmer%3B putative	gene	gene939	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0940
BFO_0941	BFO_0941	ybeY	ybeY	1018298	1018723	+	translation metalloprotein YbeY	identified by match to protein family HMM PF02130%3B match to protein family HMM TIGR00043	gene	gene938	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0941
BFO_0942	BFO_0942	leuS	leuS	1019771	1022608	+	leucine--tRNA ligase	identified by match to protein family HMM PF08264%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00396	gene	gene940	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0942
BFO_0943	BFO_0943		BFO_0943	1022605	1023480	+	hypothetical protein	identified by match to protein family HMM PF02588	gene	gene941	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0943
BFO_0944	BFO_0944	rdgB	rdgB	1023569	1024147	+	non-canonical purine NTP pyrophosphatase RdgB	identified by match to protein family HMM PF01725%3B match to protein family HMM TIGR00042	gene	gene942	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0944
BFO_0945	BFO_0945		BFO_0945	1024220	1026529	+	hypothetical protein		gene	gene943	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0945
BFO_0946	BFO_0946		BFO_0946	1026580	1027569	-	methyltransferase domain protein	identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene944	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0946
BFO_0947	BFO_0947		BFO_0947	1027733	1029640	+	AMP-binding enzyme	identified by match to protein family HMM PF00501	gene	gene945	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0947
BFO_0948	BFO_0948		BFO_0948	1029729	1030349	+	translocator protein%2C LysE family	identified by match to protein family HMM PF01810	gene	gene946	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0948
BFO_0949	BFO_0949	ispH	ispH	1030563	1031429	-	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	identified by match to protein family HMM PF02401%3B match to protein family HMM TIGR00216	gene	gene948	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0949
BFO_0950	BFO_0950		BFO_0950	1030418	1030573	+	hypothetical protein	identified by glimmer%3B putative	gene	gene947	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0950
BFO_0951	BFO_0951	cmk	cmk	1031433	1032122	-	cytidylate kinase	identified by match to protein family HMM PF02224%3B match to protein family HMM TIGR00017	gene	gene949	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0951
BFO_0952	BFO_0952		BFO_0952	1032151	1033203	-	hypothetical protein		gene	gene950	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0952
BFO_0953	BFO_0953		BFO_0953	1033408	1034106	+	TonB-dependent receptor	identified by match to protein family HMM PF03544%3B match to protein family HMM TIGR01352	gene	gene951	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0953
BFO_0954	BFO_0954		BFO_0954	1034197	1035180	+	polyprenyl synthetase	identified by match to protein family HMM PF00348	gene	gene952	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0954
BFO_0955	BFO_0955		BFO_0955	1035194	1035997	+	hydrolase%2C TatD family	identified by match to protein family HMM PF01026	gene	gene953	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0955
BFO_0956	BFO_0956		BFO_0956	1036130	1036217	+	tRNA-Ser		tRNA	gene954	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0956
BFO_0957	BFO_0957		BFO_0957	1036337	1037080	+	transporter%2C MotA/TolQ/ExbB proton channel family protein	identified by match to protein family HMM PF01618	gene	gene955	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0957
BFO_0958	BFO_0958		BFO_0958	1037114	1037563	+	hypothetical protein		gene	gene956	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0958
BFO_0959	BFO_0959		BFO_0959	1037766	1038176	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene957	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0959
BFO_0960	BFO_0960		BFO_0960	1038192	1038659	+	hypothetical protein		gene	gene958	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0960
BFO_0961	BFO_0961		BFO_0961	1038813	1039334	+	transcriptional regulator%2C AsnC family	identified by match to protein family HMM PF01037	gene	gene959	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0961
BFO_0962	BFO_0962	oadB	oadB	1039578	1040741	-	oxaloacetate decarboxylase beta chain	identified by match to protein family HMM PF03977%3B match to protein family HMM TIGR01109	gene	gene960	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0962
BFO_0963	BFO_0963		BFO_0963	1040750	1041181	-	putative glutaconyl-CoA decarboxylase subunit gamma	identified by match to protein family HMM PF00364	gene	gene961	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0963
BFO_0964	BFO_0964		BFO_0964	1041228	1042112	-	hypothetical protein		gene	gene962	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0964
BFO_0965	BFO_0965		BFO_0965	1042134	1043687	-	carboxyl transferase domain protein	identified by match to protein family HMM PF01039	gene	gene963	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0965
BFO_0966	BFO_0966	mce	mce	1043724	1044125	-	methylmalonyl-CoA epimerase	identified by match to protein family HMM PF00903%3B match to protein family HMM TIGR03081	gene	gene964	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0966
BFO_0967	BFO_0967	pyrH	pyrH	1044310	1045017	-	UMP kinase	identified by match to protein family HMM PF00696%3B match to protein family HMM TIGR02075	gene	gene965	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0967
BFO_0968	BFO_0968		BFO_0968	1045297	1045833	+	Sigma-70 region 2	identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937	gene	gene966	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0968
BFO_0969	BFO_0969		BFO_0969	1045934	1047127	+	sigma factor regulatory protein%2C FecR/PupR family	identified by match to protein family HMM PF04773	gene	gene967	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0969
BFO_0970	BFO_0970		BFO_0970	1047260	1050706	+	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene968	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0970
BFO_0971	BFO_0971		BFO_0971	1050734	1052623	+	SusD family protein	identified by match to protein family HMM PF07980	gene	gene969	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0971
BFO_0972	BFO_0972		BFO_0972	1052646	1053560	+	hypothetical protein		gene	gene970	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0972
BFO_0973	BFO_0973		BFO_0973	1053670	1054641	-	phosphomannose isomerase type I	identified by match to protein family HMM PF01238	gene	gene971	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0973
BFO_0974	BFO_0974		BFO_0974	1054725	1056827	-	1%2C4-alpha-glucan-branching enzyme	identified by match to protein family HMM PF00128%3B match to protein family HMM PF02806%3B match to protein family HMM PF02922	gene	gene972	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0974
BFO_0975	BFO_0975		BFO_0975	1057458	1057697	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene973	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0975
BFO_0976	BFO_0976		BFO_0976	1058052	1058252	-		conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene974	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0976
BFO_0977	BFO_0977		BFO_0977	1058436	1059605	+	hypothetical protein		gene	gene975	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0977
BFO_0978	BFO_0978		BFO_0978	1059795	1059983	-	hypothetical protein		gene	gene976	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0978
BFO_0979	BFO_0979		BFO_0979	1060011	1060148	-	hypothetical protein	identified by glimmer%3B putative	gene	gene977	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0979
BFO_0980	BFO_0980		BFO_0980	1060157	1060432	+	hypothetical protein		gene	gene978	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0980
BFO_0981	BFO_0981		BFO_0981	1060600	1064094	+	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07660%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene979	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0981
BFO_0982	BFO_0982		BFO_0982	1064097	1065884	+	SusD family protein	identified by match to protein family HMM PF07980	gene	gene980	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0982
BFO_0983	BFO_0983		BFO_0983	1065922	1066284	+	hypothetical protein	identified by glimmer%3B putative	gene	gene981	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0983
BFO_0984	BFO_0984		BFO_0984	1066500	1066634	+	hypothetical protein	identified by glimmer%3B putative	gene	gene982	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0984
BFO_0985	BFO_0985		BFO_0985	1066884	1067219	-	heavy metal-associated domain protein	identified by match to protein family HMM PF00403	gene	gene983	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0985
BFO_0986	BFO_0986		BFO_0986	1067250	1067402	-		hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene984	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0986
BFO_0987	BFO_0987		BFO_0987	1067692	1067814	+	hypothetical protein	identified by glimmer%3B putative	gene	gene985	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0987
BFO_0988	BFO_0988		BFO_0988	1067868	1069928	+	CoA binding domain protein	identified by match to protein family HMM PF02629	gene	gene986	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0988
BFO_0989	BFO_0989	sbcD	sbcD	1069925	1071133	+	exonuclease SbcCD%2C D subunit	identified by match to protein family HMM PF00149%3B match to protein family HMM TIGR00619	gene	gene987	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0989
BFO_0990	BFO_0990		BFO_0990	1071196	1074291	+	putative nuclease sbcCD%2C subunit C	identified by match to protein family HMM PF02463	gene	gene988	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0990
BFO_0991	BFO_0991		BFO_0991	1074415	1075386	+	putative glucokinase	identified by match to protein family HMM PF00480	gene	gene989	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0991
BFO_0992	BFO_0992		BFO_0992	1075543	1076631	-	LAO/AO transport system ATPase	identified by match to protein family HMM PF03308%3B match to protein family HMM TIGR00750	gene	gene990	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0992
BFO_0993	BFO_0993		BFO_0993	1076705	1078009	-	hypothetical protein	identified by match to protein family HMM PF07610	gene	gene991	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0993
BFO_0994	BFO_0994		BFO_0994	1078001	1078120	+	hypothetical protein	identified by glimmer%3B putative	gene	gene992	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0994
BFO_0995	BFO_0995		BFO_0995	1078158	1078628	-	hypothetical protein	identified by match to protein family HMM PF07610	gene	gene993	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0995
BFO_0996	BFO_0996	folA	folA	1078633	1079124	-	dihydrofolate reductase	identified by match to protein family HMM PF00186	gene	gene994	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0996
BFO_0997	BFO_0997	thyA	thyA	1079146	1079940	-	thymidylate synthase	identified by match to protein family HMM PF00303%3B match to protein family HMM TIGR03284	gene	gene995	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0997
BFO_0998	BFO_0998		BFO_0998	1079932	1080045	+	hypothetical protein	identified by glimmer%3B putative	gene	gene996	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0998
BFO_0999	BFO_0999	pyrP	pyrP	1080053	1081339	-	uracil permease	identified by match to protein family HMM PF00860%3B match to protein family HMM TIGR00801	gene	gene997	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_0999
BFO_1000	BFO_1000	upp	upp	1081365	1081994	-	uracil phosphoribosyltransferase	identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01091	gene	gene998	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1000
BFO_1001	BFO_1001	polA	polA	1082076	1084880	-	DNA-directed DNA polymerase	identified by match to protein family HMM PF00476%3B match to protein family HMM PF01367%3B match to protein family HMM PF01612%3B match to protein family HMM PF02739%3B match to protein family HMM TIGR00593	gene	gene999	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1001
BFO_1002	BFO_1002		BFO_1002	1084908	1085945	+	polyprenyl synthetase	identified by match to protein family HMM PF00348	gene	gene1000	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1002
BFO_1003	BFO_1003		BFO_1003	1086020	1086454	-	hypothetical protein		gene	gene1001	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1003
BFO_1004	BFO_1004		BFO_1004	1086670	1088010	+	transposase%2C IS4 family	identified by match to protein family HMM PF01609	gene	gene1002	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1004
BFO_1005	BFO_1005		BFO_1005	1088157	1091420	+	putative membrane protein		gene	gene1003	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1005
BFO_1006	BFO_1006		BFO_1006	1091427	1092041	+	polysaccharide deacetylase	identified by match to protein family HMM PF01522	gene	gene1004	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1006
BFO_1007	BFO_1007		BFO_1007	1092172	1094349	-	peptidase%2C S9A/B/C family%2C catalytic domain protein	identified by match to protein family HMM PF00326%3B match to protein family HMM PF00930	gene	gene1005	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1007
BFO_1008	BFO_1008		BFO_1008	1094380	1095717	-	THUMP domain protein	identified by match to protein family HMM PF01170%3B match to protein family HMM PF02926	gene	gene1006	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1008
BFO_1009	BFO_1009		BFO_1009	1095722	1096189	-	putative lipoprotein		gene	gene1007	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1009
BFO_1010	BFO_1010		BFO_1010	1096278	1097798	-	hypothetical protein		gene	gene1008	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1010
BFO_1011	BFO_1011		BFO_1011	1098019	1099101	+	NlpC/P60 family protein	identified by match to protein family HMM PF00877	gene	gene1009	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1011
BFO_1012	BFO_1012		BFO_1012	1099098	1100252	+	Tat pathway signal sequence domain protein	identified by match to protein family HMM PF01188%3B match to protein family HMM PF02746%3B match to protein family HMM TIGR01409	gene	gene1010	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1012
BFO_1013	BFO_1013		BFO_1013	1100479	1101288	+	hypothetical protein		gene	gene1011	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1013
BFO_1014	BFO_1014		BFO_1014	1101301	1103370	+	hypothetical protein		gene	gene1012	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1014
BFO_1015	BFO_1015		BFO_1015	1103441	1104223	+	radical SAM domain protein	identified by match to protein family HMM PF04055	gene	gene1013	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1015
BFO_1016	BFO_1016		BFO_1016	1104263	1104679	+	secondary thiamine-phosphate synthase enzyme	identified by match to protein family HMM PF01894%3B match to protein family HMM TIGR00149	gene	gene1014	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1016
BFO_1017	BFO_1017		BFO_1017	1105433	1106551	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1015	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1017
BFO_1018	BFO_1018		BFO_1018	1106637	1106873	-	hypothetical protein		gene	gene1016	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1018
BFO_1019	BFO_1019		BFO_1019	1106986	1107108	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1017	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1019
BFO_1020	BFO_1020		BFO_1020	1107437	1108507	-	putative lipoprotein		gene	gene1018	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1020
BFO_1021	BFO_1021		BFO_1021	1108507	1108821	-	hypothetical protein		gene	gene1019	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1021
BFO_1022	BFO_1022		BFO_1022	1108841	1108981	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1020	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1022
BFO_1023	BFO_1023		BFO_1023	1109379	1111043	-	putative lipoprotein		gene	gene1021	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1023
BFO_1024	BFO_1024		BFO_1024	1111043	1114111	-	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene1022	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1024
BFO_1025	BFO_1025		BFO_1025	1114303	1115889	-	putative lipoprotein		gene	gene1023	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1025
BFO_1026	BFO_1026		BFO_1026	1115870	1115995	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1024	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1026
BFO_1027	BFO_1027		BFO_1027	1116032	1117435	-		MFS transporter%2C SP family%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF00083%3B match to protein family HMM PF07690%3B match to protein family HMM TIGR00879	pseudogene	gene1025	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1027
BFO_1028	BFO_1028		BFO_1028	1117439	1118548	-	Tat pathway signal sequence domain protein	identified by match to protein family HMM TIGR01409	gene	gene1026	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1028
BFO_1029	BFO_1029	nrdG	nrdG	1119076	1119534	-	anaerobic ribonucleoside-triphosphate reductase activating protein	identified by match to protein family HMM TIGR02826	gene	gene1027	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1029
BFO_1030	BFO_1030	nrdD	nrdD	1119528	1121663	-	anaerobic ribonucleoside-triphosphate reductase	identified by match to protein family HMM PF03477%3B match to protein family HMM TIGR02827	gene	gene1028	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1030
BFO_1032	BFO_1032		BFO_1032	1122092	1122493	-	histidine triad domain protein	identified by match to protein family HMM PF01230	gene	gene1029	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1032
BFO_1033	BFO_1033	greA	greA	1122507	1122962	-	transcription elongation factor GreA	identified by match to protein family HMM PF01272%3B match to protein family HMM PF03449%3B match to protein family HMM TIGR01462	gene	gene1030	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1033
BFO_1034	BFO_1034		BFO_1034	1123169	1124329	-	hypothetical protein		gene	gene1031	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1034
BFO_1035	BFO_1035		BFO_1035	1124427	1125056	+	sugar isomerase%2C KpsF/GutQ family	identified by match to protein family HMM PF01380	gene	gene1032	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1035
BFO_1036	BFO_1036		BFO_1036	1125044	1125970	+	carbohydrate kinase%2C PfkB family	identified by match to protein family HMM PF00294	gene	gene1033	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1036
BFO_1037	BFO_1037	uvrA_1	uvrA_1	1126002	1128818	-	excinuclease ABC%2C A subunit	identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR00630	gene	gene1034	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1037
BFO_1038	BFO_1038	pepD_1	pepD_1	1128888	1130477	-	Xaa-His dipeptidase	identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01893	gene	gene1035	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1038
BFO_1039	BFO_1039		BFO_1039	1132831	1132995	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1037	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1039
BFO_1040	BFO_1040	pnp	pnp	1130597	1132852	+	polyribonucleotide nucleotidyltransferase	identified by match to protein family HMM PF00013%3B match to protein family HMM PF00575%3B match to protein family HMM PF01138%3B match to protein family HMM PF03725%3B match to protein family HMM PF03726%3B match to protein family HMM TIGR03591	gene	gene1036	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1040
BFO_1041	BFO_1041		BFO_1041	1133417	1135879	-	putative membrane protein		gene	gene1038	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1041
BFO_1042	BFO_1042		BFO_1042	1135922	1136689	-	putative PGL/P-HBAD biosynthesis glycosyltransferase	identified by match to protein family HMM PF00535	gene	gene1039	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1042
BFO_1043	BFO_1043		BFO_1043	1136693	1137955	-	glycosyltransferase%2C group 1 family protein	identified by match to protein family HMM PF00534	gene	gene1040	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1043
BFO_1044	BFO_1044		BFO_1044	1137957	1138406	-	hypothetical protein		gene	gene1041	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1044
BFO_1045	BFO_1045		BFO_1045	1138665	1138886	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1042	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1045
BFO_1046	BFO_1046		BFO_1046	1139109	1139246	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1044	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1046
BFO_1047	BFO_1047		BFO_1047	1138995	1139135	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1043	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1047
BFO_1048	BFO_1048		BFO_1048	1139281	1139784	-	bacterial transferase hexapeptide repeat protein	identified by match to protein family HMM PF00132	gene	gene1045	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1048
BFO_1049	BFO_1049		BFO_1049	1139876	1141078	-	glycosyltransferase%2C group 1 family protein	identified by match to protein family HMM PF00534	gene	gene1046	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1049
BFO_1050	BFO_1050		BFO_1050	1141075	1142235	-	UDP-N-acetylglucosamine 2-epimerase	identified by match to protein family HMM PF02350%3B match to protein family HMM TIGR00236	gene	gene1047	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1050
BFO_1051	BFO_1051		BFO_1051	1142237	1143442	-	nucleotide sugar dehydrogenase	identified by match to protein family HMM PF00984%3B match to protein family HMM PF03720%3B match to protein family HMM PF03721%3B match to protein family HMM TIGR03026	gene	gene1048	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1051
BFO_1052	BFO_1052		BFO_1052	1143646	1144767	-	toxin-antitoxin system%2C toxin component%2C Fic family	identified by match to protein family HMM PF02661	gene	gene1049	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1052
BFO_1053	BFO_1053		BFO_1053	1144754	1144891	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1050	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1053
BFO_1054	BFO_1054		BFO_1054	1144855	1144992	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1051	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1054
BFO_1055	BFO_1055		BFO_1055	1145146	1146495	-	divergent AAA domain protein	identified by match to protein family HMM PF01022%3B match to protein family HMM PF04326%3B match to protein family HMM PF08279	gene	gene1052	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1055
BFO_1056	BFO_1056	asnB	asnB	1146701	1148518	-	asparagine synthase (glutamine-hydrolyzing)	identified by match to protein family HMM PF00310%3B match to protein family HMM PF00733%3B match to protein family HMM TIGR01536	gene	gene1053	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1056
BFO_1057	BFO_1057		BFO_1057	1148523	1149671	-	glycosyltransferase%2C group 1 family protein	identified by match to protein family HMM PF00534	gene	gene1054	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1057
BFO_1058	BFO_1058		BFO_1058	1149685	1149969	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1055	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1058
BFO_1059	BFO_1059		BFO_1059	1150175	1150447	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1056	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1059
BFO_1060	BFO_1060		BFO_1060	1150461	1151738	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1057	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1060
BFO_1061	BFO_1061		BFO_1061	1151776	1152579	-	methyltransferase domain protein	identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene1058	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1061
BFO_1062	BFO_1062		BFO_1062	1152599	1153930	-	hypothetical protein		gene	gene1059	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1062
BFO_1063	BFO_1063		BFO_1063	1153920	1154612	-	putative N-acylneuraminate cytidylyltransferase	identified by match to protein family HMM PF02348	gene	gene1060	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1063
BFO_1064	BFO_1064		BFO_1064	1154609	1155646	-	nucleotidyl transferase	identified by match to protein family HMM PF00483	gene	gene1061	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1064
BFO_1065	BFO_1065	neuC	neuC	1155647	1156801	-	UDP-N-acetyl-D-glucosamine 2-epimerase%2C UDP-hydrolysing	identified by match to protein family HMM PF02350%3B match to protein family HMM TIGR03568	gene	gene1062	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1065
BFO_1066	BFO_1066	neuB	neuB	1156798	1157808	-	N-acetylneuraminate synthase	identified by match to protein family HMM PF03102%3B match to protein family HMM PF08666%3B match to protein family HMM TIGR03569	gene	gene1063	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1066
BFO_1067	BFO_1067		BFO_1067	1157805	1157984	-	hypothetical protein		gene	gene1064	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1067
BFO_1068	BFO_1068		BFO_1068	1158437	1159471	-	polysaccharide deacetylase	identified by match to protein family HMM PF01522	gene	gene1065	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1068
BFO_1069	BFO_1069		BFO_1069	1159468	1160403	-	hypothetical protein		gene	gene1066	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1069
BFO_1070	BFO_1070	fabHA_2	fabHA_2	1160499	1161494	-	beta-ketoacyl-acyl-carrier-protein synthase III	identified by match to protein family HMM PF08541%3B match to protein family HMM PF08545	gene	gene1067	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1070
BFO_1071	BFO_1071		BFO_1071	1161510	1162259	-	oxidoreductase%2C short chain dehydrogenase/reductase family protein	identified by match to protein family HMM PF00106%3B match to protein family HMM PF01370%3B match to protein family HMM PF08659	gene	gene1068	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1071
BFO_1072	BFO_1072		BFO_1072	1162259	1162489	-	hypothetical protein		gene	gene1069	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1072
BFO_1073	BFO_1073		BFO_1073	1162493	1163647	-	DegT/DnrJ/EryC1/StrS aminotransferase family protein	identified by match to protein family HMM PF01041	gene	gene1070	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1073
BFO_1074	BFO_1074		BFO_1074	1163653	1164630	-	NAD dependent epimerase/dehydratase family protein	identified by match to protein family HMM PF00106%3B match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF07993	gene	gene1071	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1074
BFO_1075	BFO_1075		BFO_1075	1164630	1166078	-	polysaccharide biosynthesis protein	identified by match to protein family HMM PF01943	gene	gene1072	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1075
BFO_1076	BFO_1076		BFO_1076	1166086	1167060	-	hypothetical protein		gene	gene1073	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1076
BFO_1077	BFO_1077		BFO_1077	1167080	1168144	-	oxidoreductase%2C NAD-binding domain protein	identified by match to protein family HMM PF01408%3B match to protein family HMM PF02894%3B match to protein family HMM PF03447	gene	gene1074	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1077
BFO_1078	BFO_1078		BFO_1078	1168170	1168286	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1075	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1078
BFO_1079	BFO_1079		BFO_1079	1168359	1169615	-	heavy metal-associated domain protein	identified by match to protein family HMM PF00403%3B match to protein family HMM PF03773	gene	gene1076	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1079
BFO_1080	BFO_1080		BFO_1080	1169654	1171252	-	peptidase%2C S41 family	identified by match to protein family HMM PF00595%3B match to protein family HMM PF03572%3B match to protein family HMM TIGR00225	gene	gene1077	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1080
BFO_1081	BFO_1081	coaD	coaD	1171249	1171728	-	pantetheine-phosphate adenylyltransferase	identified by match to protein family HMM PF01467%3B match to protein family HMM TIGR00125%3B match to protein family HMM TIGR01510	gene	gene1078	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1081
BFO_1082	BFO_1082		BFO_1082	1171739	1173604	-	putative DNA gyrase%2C B subunit	identified by match to protein family HMM PF00204%3B match to protein family HMM PF01751%3B match to protein family HMM PF02518	gene	gene1079	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1082
BFO_1083	BFO_1083		BFO_1083	1173608	1174738	-	hypothetical protein		gene	gene1080	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1083
BFO_1084	BFO_1084	dacB	dacB	1174817	1176280	-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	identified by match to protein family HMM PF02113%3B match to protein family HMM TIGR00666	gene	gene1081	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1084
BFO_1085	BFO_1085		BFO_1085	1176434	1176506	+	tRNA-Lys		tRNA	gene1082	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1085
BFO_1086	BFO_1086		BFO_1086	1176705	1179464	-	transglutaminase-like protein	identified by match to protein family HMM PF01841	gene	gene1083	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1086
BFO_1087	BFO_1087		BFO_1087	1179630	1180391	-	hypothetical protein		gene	gene1084	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1087
BFO_1088	BFO_1088		BFO_1088	1180388	1181422	-	heptosyltransferase	identified by match to protein family HMM PF01075	gene	gene1085	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1088
BFO_1089	BFO_1089		BFO_1089	1181466	1182197	-	putative phosphoribosylglycinamide formyltransferase	identified by match to protein family HMM PF00551	gene	gene1086	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1089
BFO_1090	BFO_1090	acpP	acpP	1182213	1182449	+	acyl carrier protein	identified by match to protein family HMM PF00550%3B match to protein family HMM TIGR00517	gene	gene1087	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1090
BFO_1091	BFO_1091	fabF	fabF	1182467	1183723	+	beta-ketoacyl-acyl-carrier-protein synthase II	identified by match to protein family HMM PF00109%3B match to protein family HMM PF02801%3B match to protein family HMM TIGR03150	gene	gene1088	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1091
BFO_1092	BFO_1092	rnc	rnc	1183732	1184523	+	ribonuclease III	identified by match to protein family HMM PF00035%3B match to protein family HMM PF00636%3B match to protein family HMM TIGR02191	gene	gene1089	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1092
BFO_1093	BFO_1093		BFO_1093	1184746	1185099	-	hypothetical protein	identified by match to protein family HMM PF04237	gene	gene1090	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1093
BFO_1094	BFO_1094		BFO_1094	1185123	1185260	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1091	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1094
BFO_1095	BFO_1095		BFO_1095	1185211	1186221	-	phosphofructokinase	identified by match to protein family HMM PF00365	gene	gene1092	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1095
BFO_1096	BFO_1096		BFO_1096	1186368	1187804	+	5'-nucleotidase%2C C-terminal domain protein	identified by match to protein family HMM PF00149%3B match to protein family HMM PF02872	gene	gene1093	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1096
BFO_1097	BFO_1097		BFO_1097	1187898	1191155	+	hypothetical protein		gene	gene1094	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1097
BFO_1098	BFO_1098		BFO_1098	1191408	1191524	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1095	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1098
BFO_1099	BFO_1099	gidA	gidA	1191914	1193791	+	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	identified by match to protein family HMM PF01134%3B match to protein family HMM TIGR00136	gene	gene1096	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1099
BFO_1100	BFO_1100	uvrC	uvrC	1193837	1195642	+	excinuclease ABC%2C C subunit	identified by match to protein family HMM PF01541%3B match to protein family HMM PF08459%3B match to protein family HMM TIGR00194	gene	gene1097	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1100
BFO_1101	BFO_1101	dtd	dtd	1195673	1196119	+	D-tyrosyl-tRNA(Tyr) deacylase	identified by match to protein family HMM PF02580%3B match to protein family HMM TIGR00256	gene	gene1098	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1101
BFO_1102	BFO_1102		BFO_1102	1196287	1196433	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1099	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1102
BFO_1103	BFO_1103		BFO_1103	1196476	1197234	-	hypothetical protein		gene	gene1100	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1103
BFO_1104	BFO_1104		BFO_1104	1197717	1197881	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1101	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1104
BFO_1105	BFO_1105		BFO_1105	1198060	1199130	-		transposase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01610	pseudogene	gene1102	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1105
BFO_1106	BFO_1106		BFO_1106	1199166	1199579	-	hypothetical protein		gene	gene1103	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1106
BFO_1107	BFO_1107		BFO_1107	1199594	1200106	-	hypothetical protein		gene	gene1104	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1107
BFO_1108	BFO_1108		BFO_1108	1200159	1200329	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1105	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1108
BFO_1109	BFO_1109	rnz	rnz	1200716	1201648	-	ribonuclease Z	identified by match to protein family HMM PF00753%3B match to protein family HMM TIGR02651	gene	gene1106	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1109
BFO_1110	BFO_1110		BFO_1110	1201991	1203223	-	transposase%2C IS116/IS110/IS902 family	identified by match to protein family HMM PF02371	gene	gene1107	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1110
BFO_1111	BFO_1111		BFO_1111	1203155	1203307	+	hypothetical protein		gene	gene1108	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1111
BFO_1112	BFO_1112	rpoN	rpoN	1203349	1204815	+	RNA polymerase sigma-54 factor	identified by match to protein family HMM PF00309%3B match to protein family HMM PF04552%3B match to protein family HMM PF04963%3B match to protein family HMM TIGR02395	gene	gene1109	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1112
BFO_1113	BFO_1113	gcvH	gcvH	1204896	1205273	+	glycine cleavage system H protein	identified by match to protein family HMM PF01597%3B match to protein family HMM TIGR00527	gene	gene1110	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1113
BFO_1114	BFO_1114	purE	purE	1205280	1205786	+	phosphoribosylaminoimidazole carboxylase%2C catalytic subunit	identified by match to protein family HMM PF00731%3B match to protein family HMM TIGR01162	gene	gene1111	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1114
BFO_1115	BFO_1115	ispG	ispG	1205783	1207612	+	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	identified by match to protein family HMM PF04551%3B match to protein family HMM TIGR00612	gene	gene1112	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1115
BFO_1116	BFO_1116		BFO_1116	1208573	1212331	-	hypothetical protein		gene	gene1113	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1116
BFO_1117	BFO_1117		BFO_1117	1212601	1212726	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1114	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1117
BFO_1118	BFO_1118		BFO_1118	1212738	1214393	+	hypothetical protein		gene	gene1115	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1118
BFO_1119	BFO_1119		BFO_1119	1214424	1214500	-	tRNA-Ala		tRNA	gene1116	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1119
BFO_1120	BFO_1120		BFO_1120	1214574	1214888	+	hypothetical protein		gene	gene1117	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1120
BFO_1121	BFO_1121	ruvC	ruvC	1214885	1215460	+	crossover junction endodeoxyribonuclease RuvC	identified by match to protein family HMM PF02075%3B match to protein family HMM TIGR00228	gene	gene1118	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1121
BFO_1122	BFO_1122	gdh	gdh	1215508	1216842	-	glutamate dehydrogenase%2C NAD-specific	identified by match to protein family HMM PF00208%3B match to protein family HMM PF02812	gene	gene1119	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1122
BFO_1123	BFO_1123		BFO_1123	1216839	1216976	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1120	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1123
BFO_1124	BFO_1124		BFO_1124	1219903	1220028	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1122	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1124
BFO_1125	BFO_1125		BFO_1125	1216944	1219925	+	pyruvate phosphate dikinase%2C PEP/pyruvate binding domain protein	identified by match to protein family HMM PF01326	gene	gene1121	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1125
BFO_1126	BFO_1126		BFO_1126	1220045	1223044	+	tetratricopeptide repeat protein	identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719%3B match to protein family HMM PF07720	gene	gene1123	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1126
BFO_1127	BFO_1127		BFO_1127	1223062	1224891	+	hypothetical protein		gene	gene1124	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1127
BFO_1128	BFO_1128		BFO_1128	1224893	1225162	-	tetratricopeptide repeat protein	identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719	gene	gene1125	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1128
BFO_1129	BFO_1129		BFO_1129	1225159	1225278	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1126	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1129
BFO_1130	BFO_1130	ahcY	ahcY	1225275	1226693	-	adenosylhomocysteinase	identified by match to protein family HMM PF00670%3B match to protein family HMM PF05221%3B match to protein family HMM TIGR00936	gene	gene1127	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1130
BFO_1131	BFO_1131		BFO_1131	1226812	1227003	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1128	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1131
BFO_1132	BFO_1132		BFO_1132	1227035	1228234	+	Beta-ketoacyl synthase%2C C-terminal domain protein	identified by match to protein family HMM PF00109%3B match to protein family HMM PF02801	gene	gene1129	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1132
BFO_1133	BFO_1133		BFO_1133	1228241	1229269	+	hypothetical protein		gene	gene1130	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1133
BFO_1134	BFO_1134		BFO_1134	1229338	1229616	+	hypothetical protein		gene	gene1131	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1134
BFO_1135	BFO_1135		BFO_1135	1229644	1230378	+	RDD family protein	identified by match to protein family HMM PF06271	gene	gene1132	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1135
BFO_1136	BFO_1136		BFO_1136	1231463	1233040	-	hypothetical protein		gene	gene1134	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1136
BFO_1137	BFO_1137		BFO_1137	1230417	1231469	+	TIM-barrel protein%2C nifR3 family	identified by match to protein family HMM PF01180%3B match to protein family HMM PF01207%3B match to protein family HMM TIGR00737	gene	gene1133	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1137
BFO_1138	BFO_1138	asd	asd	1233052	1234062	+	aspartate-semialdehyde dehydrogenase	identified by match to protein family HMM PF01118%3B match to protein family HMM PF02774%3B match to protein family HMM TIGR01296	gene	gene1135	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1138
BFO_1139	BFO_1139		BFO_1139	1234090	1234323	-	phage shock protein PspE family protein		gene	gene1136	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1139
BFO_1140	BFO_1140		BFO_1140	1234609	1236909	+	hypothetical protein		gene	gene1137	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1140
BFO_1141	BFO_1141		BFO_1141	1237127	1238062	-	hypothetical protein		gene	gene1138	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1141
BFO_1142	BFO_1142		BFO_1142	1238359	1238490	+	hypothetical protein		gene	gene1139	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1142
BFO_1143	BFO_1143		BFO_1143	1238582	1238878	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1140	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1143
BFO_1144	BFO_1144		BFO_1144	1239454	1240992	+		YcaO-like family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02624	pseudogene	gene1141	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1144
BFO_1145	BFO_1145		BFO_1145	1240996	1241112	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1142	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1145
BFO_1146	BFO_1146		BFO_1146	1241193	1241912	+	transcriptional regulator%2C LuxR family	identified by match to protein family HMM PF00196	gene	gene1143	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1146
BFO_1147	BFO_1147		BFO_1147	1241947	1242150	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1144	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1147
BFO_1148	BFO_1148		BFO_1148	1242198	1242404	+		hypothetical protein%3B this region contains one or more premature stops and/or frameshifts%3Bidentified by glimmer%3B putative	pseudogene	gene1145	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1148
BFO_1149	BFO_1149		BFO_1149	1242411	1242575	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1146	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1149
BFO_1150	BFO_1150		BFO_1150	1242538	1242900	-	rhodanese-like protein	identified by match to protein family HMM PF00581	gene	gene1147	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1150
BFO_1151	BFO_1151		BFO_1151	1243005	1244558	+	arylsulfatase	identified by match to protein family HMM PF00884	gene	gene1148	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1151
BFO_1152	BFO_1152		BFO_1152	1244533	1244889	+	MazG nucleotide pyrophosphohydrolase domain protein	identified by match to protein family HMM PF03819	gene	gene1149	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1152
BFO_1153	BFO_1153		BFO_1153	1245807	1247486	-	phosphoribulokinase/uridine kinase family protein	identified by match to protein family HMM PF00485	gene	gene1151	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1153
BFO_1154	BFO_1154	deoC	deoC	1244896	1245810	+	deoxyribose-phosphate aldolase	identified by match to protein family HMM PF01791%3B match to protein family HMM TIGR00126	gene	gene1150	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1154
BFO_1155	BFO_1155		BFO_1155	1247550	1249355	+	Na/Pi-cotransporter II-like protein	identified by match to protein family HMM PF02690%3B match to protein family HMM TIGR00704	gene	gene1152	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1155
BFO_1156	BFO_1156	uxaC	uxaC	1249355	1250761	+	glucuronate isomerase	identified by match to protein family HMM PF02614	gene	gene1153	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1156
BFO_1157	BFO_1157	pfkA	pfkA	1250862	1251872	+	6-phosphofructokinase	identified by match to protein family HMM PF00365%3B match to protein family HMM TIGR02482	gene	gene1154	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1157
BFO_1158	BFO_1158		BFO_1158	1251930	1252229	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1155	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1158
BFO_1159	BFO_1159		BFO_1159	1252360	1253793	-	transposase%2C IS4 family	identified by match to protein family HMM PF01609	gene	gene1156	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1159
BFO_1160	BFO_1160		BFO_1160	1253987	1254103	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1157	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1160
BFO_1161	BFO_1161		BFO_1161	1254243	1254365	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1158	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1161
BFO_1162	BFO_1162		BFO_1162	1254722	1255705	+	putative membrane protein	identified by match to protein family HMM PF01944%3B overlaps another CDS with the same product name	gene	gene1159	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1162
BFO_1163	BFO_1163		BFO_1163	1255692	1256624	+	putative membrane protein	overlaps another CDS with the same product name	gene	gene1160	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1163
BFO_1164	BFO_1164		BFO_1164	1256730	1257284	+	hypothetical protein		gene	gene1161	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1164
BFO_1165	BFO_1165		BFO_1165	1257295	1258776	+	hypothetical protein		gene	gene1162	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1165
BFO_1166	BFO_1166		BFO_1166	1258778	1259749	+	ATPase%2C AAA family	identified by match to protein family HMM PF07726%3B match to protein family HMM PF07728	gene	gene1163	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1166
BFO_1167	BFO_1167		BFO_1167	1259749	1261062	+	hypothetical protein	identified by match to protein family HMM PF01882	gene	gene1164	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1167
BFO_1168	BFO_1168		BFO_1168	1261443	1263410	-	thermolysin metallopeptidase%2C catalytic domain protein	identified by match to protein family HMM PF01447%3B match to protein family HMM PF02868	gene	gene1165	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1168
BFO_1169	BFO_1169		BFO_1169	1263576	1264016	-		hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene1166	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1169
BFO_1170	BFO_1170		BFO_1170	1264022	1264405	-	putative lipoprotein		gene	gene1167	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1170
BFO_1171	BFO_1171		BFO_1171	1264547	1264675	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1168	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1171
BFO_1172	BFO_1172		BFO_1172	1264922	1265062	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1169	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1172
BFO_1173	BFO_1173		BFO_1173	1265243	1265356	-	hypothetical protein		gene	gene1170	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1173
BFO_1174	BFO_1174		BFO_1174	1265360	1266553	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1171	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1174
BFO_1175	BFO_1175		BFO_1175	1266690	1266854	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1172	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1175
BFO_1176	BFO_1176		BFO_1176	1267057	1267767	-	hypothetical protein		gene	gene1173	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1176
BFO_1177	BFO_1177		BFO_1177	1267922	1268035	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1174	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1177
BFO_1178	BFO_1178		BFO_1178	1268623	1268835	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1175	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1178
BFO_1179	BFO_1179		BFO_1179	1269066	1271312	-	hypothetical protein	overlaps another CDS with the same product name	gene	gene1176	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1179
BFO_1180	BFO_1180		BFO_1180	1271309	1271422	-	hypothetical protein	overlaps another CDS with the same product name	gene	gene1177	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1180
BFO_1181	BFO_1181		BFO_1181	1271685	1271882	-	putative lipoprotein		gene	gene1178	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1181
BFO_1182	BFO_1182		BFO_1182	1272295	1274349	+	F5/8 type C domain protein	identified by match to protein family HMM PF00754	gene	gene1179	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1182
BFO_1183	BFO_1183		BFO_1183	1274404	1275069	+	MarC family integral membrane protein	identified by match to protein family HMM PF01914	gene	gene1180	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1183
BFO_1184	BFO_1184		BFO_1184	1275172	1275348	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1181	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1184
BFO_1185	BFO_1185	purD	purD	1275357	1276631	+	phosphoribosylamine--glycine ligase	identified by match to protein family HMM PF01071%3B match to protein family HMM PF02655%3B match to protein family HMM PF02843%3B match to protein family HMM PF02844%3B match to protein family HMM TIGR00877	gene	gene1182	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1185
BFO_1186	BFO_1186		BFO_1186	1276647	1277663	+	putative membrane protein		gene	gene1183	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1186
BFO_1187	BFO_1187		BFO_1187	1277651	1278100	+	hypothetical protein		gene	gene1184	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1187
BFO_1188	BFO_1188		BFO_1188	1278139	1278321	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1185	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1188
BFO_1189	BFO_1189		BFO_1189	1278376	1279743	+	hydrolase%2C alpha/beta domain protein	identified by match to protein family HMM PF00561%3B match to protein family HMM PF02129	gene	gene1186	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1189
BFO_1190	BFO_1190		BFO_1190	1279722	1279838	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1187	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1190
BFO_1191	BFO_1191		BFO_1191	1280039	1283056	+	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene1188	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1191
BFO_1192	BFO_1192		BFO_1192	1283068	1284609	+	SusD family protein	identified by match to protein family HMM PF07980	gene	gene1189	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1192
BFO_1193	BFO_1193		BFO_1193	1284629	1285420	+	putative lipoprotein		gene	gene1190	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1193
BFO_1194	BFO_1194		BFO_1194	1285429	1286235	+	phospholipase/carboxylesterase	identified by match to protein family HMM PF02230	gene	gene1191	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1194
BFO_1195	BFO_1195		BFO_1195	1286232	1287584	+	putative lipoprotein		gene	gene1192	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1195
BFO_1196	BFO_1196		BFO_1196	1287786	1288343	-	hypothetical protein		gene	gene1193	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1196
BFO_1197	BFO_1197		BFO_1197	1289166	1291184	-	SusD family protein	identified by match to protein family HMM PF07980	gene	gene1194	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1197
BFO_1198	BFO_1198		BFO_1198	1291206	1294343	-	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene1195	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1198
BFO_1199	BFO_1199		BFO_1199	1294314	1294463	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1196	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1199
BFO_1200	BFO_1200		BFO_1200	1294558	1294731	+	hypothetical protein		gene	gene1197	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1200
BFO_1201	BFO_1201		BFO_1201	1295176	1295643	-	putative lipoprotein		gene	gene1198	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1201
BFO_1202	BFO_1202		BFO_1202	1295680	1297539	-	SusD family protein	identified by match to protein family HMM PF07980	gene	gene1199	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1202
BFO_1203	BFO_1203		BFO_1203	1297564	1299300	-		TonB-linked outer membrane protein%2C SusC/RagA family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00593	pseudogene	gene1200	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1203
BFO_1204	BFO_1204		BFO_1204	1299269	1300666	-		TonB-linked outer membrane protein%2C SusC/RagA family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF07715%3B match to protein family HMM TIGR04057	pseudogene	gene1201	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1204
BFO_1205	BFO_1205		BFO_1205	1300944	1301075	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1203	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1205
BFO_1206	BFO_1206		BFO_1206	1300733	1300984	+	hypothetical protein		gene	gene1202	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1206
BFO_1207	BFO_1207		BFO_1207	1301640	1301819	-	hypothetical protein		gene	gene1204	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1207
BFO_1208	BFO_1208		BFO_1208	1301829	1302680	-	transcriptional regulator%2C LuxR family	identified by match to protein family HMM PF00196	gene	gene1205	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1208
BFO_1209	BFO_1209		BFO_1209	1302743	1303684	-	Tat pathway signal sequence domain protein	identified by match to protein family HMM PF01261%3B match to protein family HMM TIGR01409%3B overlaps another CDS with the same product name	gene	gene1206	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1209
BFO_1210	BFO_1210		BFO_1210	1303681	1305081	-	Tat pathway signal sequence domain protein	identified by match to protein family HMM PF01408%3B match to protein family HMM TIGR01409%3B overlaps another CDS with the same product name	gene	gene1207	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1210
BFO_1211	BFO_1211		BFO_1211	1305123	1306628	-	hypothetical protein	identified by match to protein family HMM PF03781	gene	gene1208	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1211
BFO_1212	BFO_1212		BFO_1212	1306722	1306847	-	hypothetical protein		gene	gene1209	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1212
BFO_1213	BFO_1213		BFO_1213	1306885	1307136	-	hypothetical protein		gene	gene1210	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1213
BFO_1214	BFO_1214		BFO_1214	1307169	1308014	+	putative lipoprotein		gene	gene1211	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1214
BFO_1215	BFO_1215	glyS	glyS	1308096	1309640	+	glycine--tRNA ligase	identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM TIGR00389	gene	gene1212	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1215
BFO_1216	BFO_1216		BFO_1216	1309674	1310264	+	peptidyl-prolyl cis-trans isomerase%2C FKBP-type	identified by match to protein family HMM PF00254	gene	gene1213	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1216
BFO_1217	BFO_1217		BFO_1217	1310275	1310919	-	hypothetical protein		gene	gene1214	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1217
BFO_1218	BFO_1218	fumB	fumB	1311001	1312641	-	fumarate hydratase class I%2C anaerobic	identified by match to protein family HMM PF05681%3B match to protein family HMM PF05683%3B match to protein family HMM TIGR00722%3B match to protein family HMM TIGR00723	gene	gene1215	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1218
BFO_1219	BFO_1219		BFO_1219	1312665	1312862	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1216	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1219
BFO_1220	BFO_1220		BFO_1220	1312936	1313625	-	putative transcriptional regulatory protein afsQ1	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene1217	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1220
BFO_1221	BFO_1221		BFO_1221	1313618	1314961	-	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein	identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518	gene	gene1218	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1221
BFO_1222	BFO_1222		BFO_1222	1315318	1316553	+	site-specific recombinase%2C phage integrase family	identified by match to protein family HMM PF00589	gene	gene1219	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1222
BFO_1223	BFO_1223		BFO_1223	1316567	1316929	+	hypothetical protein		gene	gene1220	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1223
BFO_1224	BFO_1224		BFO_1224	1317021	1317326	-	DNA binding domain protein%2C excisionase family	identified by match to protein family HMM TIGR01764	gene	gene1222	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1224
BFO_1225	BFO_1225		BFO_1225	1316923	1317042	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1221	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1225
BFO_1226	BFO_1226		BFO_1226	1317366	1317623	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1223	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1226
BFO_1227	BFO_1227		BFO_1227	1317910	1318302	+	DNA binding domain protein%2C excisionase family	identified by match to protein family HMM TIGR01764	gene	gene1224	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1227
BFO_1228	BFO_1228		BFO_1228	1318306	1318656	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1225	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1228
BFO_1229	BFO_1229		BFO_1229	1318676	1320253	+	hypothetical protein		gene	gene1226	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1229
BFO_1230	BFO_1230		BFO_1230	1320313	1322403	+	DNA topoisomerase	identified by match to protein family HMM PF01131%3B match to protein family HMM PF01751%3B match to protein family HMM TIGR01056	gene	gene1227	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1230
BFO_1231	BFO_1231		BFO_1231	1322642	1323094	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF08989	pseudogene	gene1228	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1231
BFO_1232	BFO_1232		BFO_1232	1323084	1328948	+	helicase C-terminal domain protein	identified by match to protein family HMM PF00271%3B match to protein family HMM PF02384	gene	gene1229	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1232
BFO_1233	BFO_1233		BFO_1233	1329532	1329909	+	hypothetical protein		gene	gene1230	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1233
BFO_1234	BFO_1234		BFO_1234	1329921	1330778	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene1231	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1234
BFO_1235	BFO_1235		BFO_1235	1331023	1332960	+	elongation factor Tu GTP binding domain protein	identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF03764	gene	gene1232	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1235
BFO_1236	BFO_1236		BFO_1236	1332960	1335278	+	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF02518	gene	gene1233	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1236
BFO_1237	BFO_1237		BFO_1237	1335271	1336593	+	Sigma-54 interaction domain protein	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00158%3B match to protein family HMM PF02954%3B match to protein family HMM PF07728	gene	gene1234	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1237
BFO_1238	BFO_1238		BFO_1238	1336875	1337288	+	hypothetical protein		gene	gene1235	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1238
BFO_1239	BFO_1239		BFO_1239	1337311	1337451	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1236	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1239
BFO_1240	BFO_1240		BFO_1240	1337500	1338117	+		RteC protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF09357	pseudogene	gene1237	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1240
BFO_1241	BFO_1241		BFO_1241	1338268	1339731	+	divergent AAA domain protein	identified by match to protein family HMM PF04326	gene	gene1238	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1241
BFO_1242	BFO_1242		BFO_1242	1339724	1340116	+	hypothetical protein		gene	gene1239	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1242
BFO_1243	BFO_1243		BFO_1243	1340158	1342167	-	TraG family protein		gene	gene1240	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1243
BFO_1244	BFO_1244		BFO_1244	1342199	1343449	-	relaxase/mobilization nuclease domain protein	identified by match to protein family HMM PF03432	gene	gene1241	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1244
BFO_1245	BFO_1245		BFO_1245	1343428	1343853	-	hypothetical protein		gene	gene1242	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1245
BFO_1246	BFO_1246		BFO_1246	1344240	1345325	+	hypothetical protein		gene	gene1243	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1246
BFO_1247	BFO_1247		BFO_1247	1345328	1345768	+	hypothetical protein		gene	gene1244	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1247
BFO_1248	BFO_1248		BFO_1248	1345765	1346118	+	hypothetical protein		gene	gene1245	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1248
BFO_1249	BFO_1249		BFO_1249	1346157	1346873	+	hypothetical protein		gene	gene1246	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1249
BFO_1250	BFO_1250		BFO_1250	1347076	1347387	+	conjugative transposon protein TraE		gene	gene1247	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1250
BFO_1251	BFO_1251		BFO_1251	1347398	1347730	+	conjugative transposon protein TraF		gene	gene1248	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1251
BFO_1252	BFO_1252		BFO_1252	1347745	1350231	+	conjugation system ATPase%2C TraG family	identified by match to protein family HMM TIGR03783	gene	gene1249	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1252
BFO_1253	BFO_1253		BFO_1253	1350281	1350661	+	putative lipoprotein		gene	gene1250	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1253
BFO_1254	BFO_1254		BFO_1254	1350685	1351314	+	conjugative transposon protein TraI		gene	gene1251	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1254
BFO_1255	BFO_1255	traJ	traJ	1351318	1352322	+	conjugative transposon TraJ protein	identified by match to protein family HMM PF07863%3B match to protein family HMM TIGR03782	gene	gene1252	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1255
BFO_1256	BFO_1256	traK	traK	1352354	1352977	+	conjugative transposon TraK protein	identified by match to protein family HMM TIGR03781	gene	gene1253	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1256
BFO_1257	BFO_1257		BFO_1257	1352984	1353292	+	hypothetical protein		gene	gene1254	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1257
BFO_1258	BFO_1258	traM	traM	1353273	1354622	+	conjugative transposon TraM protein	identified by match to protein family HMM TIGR03779	gene	gene1255	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1258
BFO_1259	BFO_1259	traN_1	traN_1	1354693	1355664	+	conjugative transposon TraN protein	identified by match to protein family HMM TIGR03780	gene	gene1256	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1259
BFO_1260	BFO_1260		BFO_1260	1355748	1356242	+	hypothetical protein		gene	gene1257	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1260
BFO_1261	BFO_1261		BFO_1261	1356251	1357120	+	CHC2 zinc finger domain protein	identified by match to protein family HMM PF01807	gene	gene1258	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1261
BFO_1262	BFO_1262		BFO_1262	1357146	1357649	+	conjugative transposon protein TraQ family protein		gene	gene1259	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1262
BFO_1263	BFO_1263		BFO_1263	1357880	1358173	+	hypothetical protein		gene	gene1260	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1263
BFO_1264	BFO_1264		BFO_1264	1358237	1358458	-	hypothetical protein		gene	gene1261	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1264
BFO_1265	BFO_1265		BFO_1265	1358576	1358884	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1262	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1265
BFO_1266	BFO_1266		BFO_1266	1358930	1359175	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1263	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1266
BFO_1267	BFO_1267		BFO_1267	1359172	1359405	-	hypothetical protein		gene	gene1264	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1267
BFO_1268	BFO_1268		BFO_1268	1359426	1359683	-	hypothetical protein		gene	gene1265	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1268
BFO_1269	BFO_1269		BFO_1269	1359708	1360997	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1266	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1269
BFO_1270	BFO_1270		BFO_1270	1361000	1361422	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1267	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1270
BFO_1271	BFO_1271		BFO_1271	1361436	1361657	-		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene1268	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1271
BFO_1272	BFO_1272		BFO_1272	1361669	1361884	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1269	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1272
BFO_1273	BFO_1273		BFO_1273	1361844	1362035	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1270	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1273
BFO_1274	BFO_1274		BFO_1274	1362054	1362182	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1271	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1274
BFO_1275	BFO_1275		BFO_1275	1362207	1362344	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1272	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1275
BFO_1276	BFO_1276		BFO_1276	1362341	1362532	+	hypothetical protein		gene	gene1273	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1276
BFO_1277	BFO_1277		BFO_1277	1362606	1362719	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1274	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1277
BFO_1278	BFO_1278		BFO_1278	1363043	1363225	+	hypothetical protein		gene	gene1275	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1278
BFO_1279	BFO_1279		BFO_1279	1363331	1363516	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1276	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1279
BFO_1280	BFO_1280		BFO_1280	1363560	1363724	+	bacteriocin-type signal sequence		gene	gene1277	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1280
BFO_1281	BFO_1281		BFO_1281	1363705	1363890	+	hypothetical protein		gene	gene1278	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1281
BFO_1282	BFO_1282		BFO_1282	1364398	1364511	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1279	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1282
BFO_1283	BFO_1283		BFO_1283	1364656	1364796	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1280	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1283
BFO_1284	BFO_1284		BFO_1284	1364881	1365090	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1281	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1284
BFO_1285	BFO_1285		BFO_1285	1365167	1365298	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1282	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1285
BFO_1286	BFO_1286		BFO_1286	1365547	1366704	+	auxiliary transport protein%2C membrane fusion protein (MFP) family protein		gene	gene1283	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1286
BFO_1287	BFO_1287		BFO_1287	1366719	1368878	+	ABC-type bacteriocin transporter	identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664%3B match to protein family HMM PF03412	gene	gene1284	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1287
BFO_1288	BFO_1288		BFO_1288	1368875	1370182	+	outer membrane efflux protein	identified by match to protein family HMM PF02321	gene	gene1285	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1288
BFO_1289	BFO_1289		BFO_1289	1370199	1370543	+	hypothetical protein		gene	gene1286	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1289
BFO_1290	BFO_1290		BFO_1290	1370789	1370950	+	hypothetical protein		gene	gene1287	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1290
BFO_1291	BFO_1291		BFO_1291	1371100	1371417	+	hypothetical protein		gene	gene1288	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1291
BFO_1292	BFO_1292		BFO_1292	1372014	1372373	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1289	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1292
BFO_1293	BFO_1293		BFO_1293	1372458	1372628	+	hypothetical protein		gene	gene1290	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1293
BFO_1294	BFO_1294		BFO_1294	1372786	1372947	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1291	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1294
BFO_1295	BFO_1295		BFO_1295	1373107	1373220	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1292	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1295
BFO_1296	BFO_1296		BFO_1296	1373199	1373327	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1293	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1296
BFO_1297	BFO_1297		BFO_1297	1373398	1376028	+	hypothetical protein		gene	gene1294	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1297
BFO_1298	BFO_1298		BFO_1298	1376065	1379400	+	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene1295	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1298
BFO_1299	BFO_1299		BFO_1299	1379414	1380763	+	SusD family protein	identified by match to protein family HMM PF07980	gene	gene1296	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1299
BFO_1300	BFO_1300		BFO_1300	1380763	1380882	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1297	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1300
BFO_1301	BFO_1301		BFO_1301	1381026	1382000	-	hypothetical protein		gene	gene1298	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1301
BFO_1302	BFO_1302		BFO_1302	1382094	1384112	-	OmpA family protein	identified by match to protein family HMM PF00515%3B match to protein family HMM PF00691%3B match to protein family HMM PF07676%3B match to protein family HMM PF07719	gene	gene1299	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1302
BFO_1303	BFO_1303		BFO_1303	1384122	1385390	-	putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase	identified by match to protein family HMM PF02547	gene	gene1300	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1303
BFO_1304	BFO_1304		BFO_1304	1385392	1389468	-	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00165%3B match to protein family HMM PF00512%3B match to protein family HMM PF02518%3B match to protein family HMM PF07494%3B match to protein family HMM PF07495	gene	gene1301	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1304
BFO_1305	BFO_1305		BFO_1305	1389577	1389753	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1302	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1305
BFO_1306	BFO_1306	glaB	glaB	1389709	1391559	+	alpha-1%2C3-galactosidase B		gene	gene1303	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1306
BFO_1307	BFO_1307	cysS	cysS	1391666	1393219	-	cysteine--tRNA ligase	identified by match to protein family HMM PF01406%3B match to protein family HMM PF09190%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00435	gene	gene1304	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1307
BFO_1308	BFO_1308	fabG_1	fabG_1	1393258	1393983	+	3-oxoacyl-[acyl-carrier-protein] reductase	identified by match to protein family HMM PF00106%3B match to protein family HMM PF08659	gene	gene1305	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1308
BFO_1309	BFO_1309		BFO_1309	1394067	1394312	+	putative acyl carrier protein	identified by match to protein family HMM PF00550	gene	gene1306	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1309
BFO_1310	BFO_1310		BFO_1310	1394314	1395222	+	lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase	identified by match to protein family HMM PF03279	gene	gene1307	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1310
BFO_1311	BFO_1311		BFO_1311	1395206	1396285	+	methyltransferase domain protein	identified by match to protein family HMM PF00891%3B match to protein family HMM PF08242	gene	gene1308	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1311
BFO_1312	BFO_1312		BFO_1312	1396307	1396744	+	FabA-like domain protein	identified by match to protein family HMM PF07977	gene	gene1309	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1312
BFO_1313	BFO_1313		BFO_1313	1396773	1397198	+	acyl-CoA thioester hydrolase%2C YbgC/YbaW family	identified by match to protein family HMM PF03061	gene	gene1310	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1313
BFO_1314	BFO_1314		BFO_1314	1397195	1398367	+	Beta-ketoacyl synthase%2C C-terminal domain protein	identified by match to protein family HMM PF00109%3B match to protein family HMM PF02801	gene	gene1311	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1314
BFO_1315	BFO_1315		BFO_1315	1398380	1399012	+	hypothetical protein		gene	gene1312	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1315
BFO_1316	BFO_1316		BFO_1316	1399031	1399288	+	putative acyl carrier protein		gene	gene1313	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1316
BFO_1317	BFO_1317		BFO_1317	1399428	1405067	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1314	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1317
BFO_1318	BFO_1318		BFO_1318	1405025	1405357	+		hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene1315	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1318
BFO_1319	BFO_1319		BFO_1319	1405523	1406485	+	putative lipoprotein		gene	gene1316	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1319
BFO_1320	BFO_1320		BFO_1320	1406491	1407054	+	ATP:cob(I)alamin adenosyltransferase	identified by match to protein family HMM PF01923%3B match to protein family HMM TIGR00636	gene	gene1317	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1320
BFO_1321	BFO_1321		BFO_1321	1407138	1407359	+	hypothetical protein		gene	gene1318	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1321
BFO_1322	BFO_1322		BFO_1322	1407463	1408455	+	Bacteroidetes-specific putative membrane protein	identified by match to protein family HMM TIGR03519	gene	gene1319	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1322
BFO_1323	BFO_1323		BFO_1323	1408486	1409928	+	putative gliding motility-associated lipoprotein GldK	identified by match to protein family HMM PF03781	gene	gene1320	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1323
BFO_1324	BFO_1324	gldL	gldL	1409961	1411049	+	gliding motility-associated protein GldL	identified by match to protein family HMM TIGR03513	gene	gene1321	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1324
BFO_1325	BFO_1325	gldM	gldM	1411101	1412666	+	gliding motility-associated protein GldM	identified by match to protein family HMM TIGR03517	gene	gene1322	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1325
BFO_1326	BFO_1326	gldN	gldN	1412697	1413809	+	gliding motility-associated protein GldN	identified by match to protein family HMM TIGR03523	gene	gene1323	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1326
BFO_1327	BFO_1327		BFO_1327	1413847	1414464	-	WbqC-like protein	identified by match to protein family HMM PF08889	gene	gene1324	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1327
BFO_1328	BFO_1328	lepB_3	lepB_3	1414468	1415310	-	signal peptidase I	identified by match to protein family HMM PF00717%3B match to protein family HMM TIGR02227	gene	gene1325	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1328
BFO_1329	BFO_1329	lepB_4	lepB_4	1415334	1416743	-	signal peptidase I	identified by match to protein family HMM PF00717%3B match to protein family HMM TIGR02227	gene	gene1326	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1329
BFO_1330	BFO_1330	dapB	dapB	1416760	1417491	-	dihydrodipicolinate reductase	identified by match to protein family HMM PF01113%3B match to protein family HMM PF05173%3B match to protein family HMM TIGR00036	gene	gene1327	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1330
BFO_1331	BFO_1331		BFO_1331	1417603	1418877	+	hypothetical protein		gene	gene1328	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1331
BFO_1332	BFO_1332		BFO_1332	1418946	1420859	+	putative lipoprotein		gene	gene1329	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1332
BFO_1333	BFO_1333		BFO_1333	1420963	1421682	+	hypothetical protein		gene	gene1330	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1333
BFO_1334	BFO_1334		BFO_1334	1421765	1422706	+	hypothetical protein	identified by match to protein family HMM TIGR01784	gene	gene1331	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1334
BFO_1335	BFO_1335		BFO_1335	1422743	1422871	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1332	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1335
BFO_1336	BFO_1336		BFO_1336	1423033	1428483	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1333	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1336
BFO_1337	BFO_1337		BFO_1337	1428533	1428727	+	hypothetical protein		gene	gene1334	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1337
BFO_1338	BFO_1338		BFO_1338	1428740	1429339	+	glutathione peroxidase	identified by match to protein family HMM PF00255	gene	gene1335	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1338
BFO_1339	BFO_1339	frr	frr	1429639	1430202	+	ribosome recycling factor	identified by match to protein family HMM PF01765%3B match to protein family HMM TIGR00496	gene	gene1336	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1339
BFO_1340	BFO_1340	rsgA	rsgA	1430202	1431134	+	ribosome small subunit-dependent GTPase A	identified by match to protein family HMM PF03193%3B match to protein family HMM TIGR00157	gene	gene1337	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1340
BFO_1341	BFO_1341		BFO_1341	1431146	1432471	-	putative dGTPase	identified by match to protein family HMM TIGR01353	gene	gene1338	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1341
BFO_1342	BFO_1342		BFO_1342	1432953	1433792	+		TonB-dependent receptor plug domain protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF07715%3B match to protein family HMM TIGR04057	pseudogene	gene1339	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1342
BFO_1343	BFO_1343		BFO_1343	1433865	1435952	+		TonB-linked outer membrane protein%2C SusC/RagA family%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF00593%3B match to protein family HMM TIGR04056	pseudogene	gene1340	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1343
BFO_1344	BFO_1344		BFO_1344	1435969	1437621	+	putative lipoprotein		gene	gene1341	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1344
BFO_1345	BFO_1345	ackA	ackA	1438254	1439465	-	acetate kinase	identified by match to protein family HMM PF00871%3B match to protein family HMM TIGR00016	gene	gene1342	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1345
BFO_1346	BFO_1346	pta	pta	1439462	1440481	-	phosphate acetyltransferase	identified by match to protein family HMM PF01515%3B match to protein family HMM TIGR00651	gene	gene1343	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1346
BFO_1347	BFO_1347		BFO_1347	1440532	1441305	-	TIGR00159 family protein	identified by match to protein family HMM PF02457%3B match to protein family HMM TIGR00159	gene	gene1344	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1347
BFO_1348	BFO_1348	folP	folP	1441315	1442157	-	dihydropteroate synthase	identified by match to protein family HMM PF00809%3B match to protein family HMM TIGR01496	gene	gene1345	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1348
BFO_1349	BFO_1349	murF	murF	1442235	1443530	+	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase	identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01143	gene	gene1346	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1349
BFO_1350	BFO_1350		BFO_1350	1443577	1445109	+	PAP2 family protein	identified by match to protein family HMM PF01569	gene	gene1347	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1350
BFO_1351	BFO_1351		BFO_1351	1445186	1445270	+	tRNA-Leu		tRNA	gene1348	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1351
BFO_1352	BFO_1352	prtC	prtC	1445335	1446597	-	collagenase	identified by match to protein family HMM PF01136	gene	gene1349	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1352
BFO_1353	BFO_1353		BFO_1353	1446603	1447535	-	transporter%2C small conductance mechanosensitive ion channel MscS family protein	identified by match to protein family HMM PF00924	gene	gene1350	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1353
BFO_1354	BFO_1354		BFO_1354	1448188	1448275	+	tRNA-Ser		tRNA	gene1351	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1354
BFO_1355	BFO_1355		BFO_1355	1448416	1449366	-		transposase%2C IS4 family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01609	pseudogene	gene1352	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1355
BFO_1356	BFO_1356		BFO_1356	1449420	1449782	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1353	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1356
BFO_1357	BFO_1357		BFO_1357	1450112	1451110	-	hypothetical protein	identified by match to protein family HMM PF08843	gene	gene1354	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1357
BFO_1358	BFO_1358		BFO_1358	1451095	1451832	-	hypothetical protein		gene	gene1355	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1358
BFO_1359	BFO_1359		BFO_1359	1452045	1452977	-	Abi-like protein	identified by match to protein family HMM PF07751	gene	gene1356	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1359
BFO_1360	BFO_1360		BFO_1360	1453136	1453444	-	DNA binding domain protein%2C excisionase family		gene	gene1357	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1360
BFO_1361	BFO_1361		BFO_1361	1453432	1453863	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1358	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1361
BFO_1362	BFO_1362		BFO_1362	1454071	1454589	-	hypothetical protein		gene	gene1359	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1362
BFO_1363	BFO_1363	pruA	pruA	1454776	1456407	-	1-pyrroline-5-carboxylate dehydrogenase	identified by match to protein family HMM PF00171%3B match to protein family HMM TIGR01236	gene	gene1360	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1363
BFO_1364	BFO_1364		BFO_1364	1456440	1457315	-	putative purine nucleoside phosphorylase DeoD-type	identified by match to protein family HMM PF01048	gene	gene1361	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1364
BFO_1365	BFO_1365		BFO_1365	1457328	1458800	-	WD40-like protein	identified by match to protein family HMM PF07676	gene	gene1362	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1365
BFO_1366	BFO_1366	miaA_2	miaA_2	1458842	1459741	-	tRNA dimethylallyltransferase	identified by match to protein family HMM PF01715%3B match to protein family HMM TIGR00174	gene	gene1363	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1366
BFO_1367	BFO_1367		BFO_1367	1459748	1460311	-	hypothetical protein		gene	gene1364	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1367
BFO_1368	BFO_1368	lpxA	lpxA	1460332	1461114	-	acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase	identified by match to protein family HMM PF00132%3B match to protein family HMM TIGR01852	gene	gene1365	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1368
BFO_1369	BFO_1369	fabZ	fabZ	1461118	1462503	-	beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ	identified by match to protein family HMM PF03331%3B match to protein family HMM PF07977%3B match to protein family HMM TIGR00325%3B match to protein family HMM TIGR01750	gene	gene1366	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1369
BFO_1370	BFO_1370	lpxD	lpxD	1462516	1463553	-	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	identified by match to protein family HMM PF00132%3B match to protein family HMM PF04613%3B match to protein family HMM TIGR01853	gene	gene1367	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1370
BFO_1371	BFO_1371		BFO_1371	1463727	1464479	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1368	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1371
BFO_1372	BFO_1372	pyrF	pyrF	1464573	1465403	-	orotidine 5'-phosphate decarboxylase	identified by match to protein family HMM PF00215%3B match to protein family HMM TIGR02127	gene	gene1369	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1372
BFO_1373	BFO_1373	prfA	prfA	1465456	1466568	-	peptide chain release factor 1	identified by match to protein family HMM PF00472%3B match to protein family HMM PF03462%3B match to protein family HMM TIGR00019	gene	gene1370	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1373
BFO_1374	BFO_1374		BFO_1374	1466623	1467789	-	hypothetical protein	identified by match to protein family HMM PF02769	gene	gene1371	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1374
BFO_1375	BFO_1375		BFO_1375	1467786	1468523	-	mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	identified by match to protein family HMM PF01832	gene	gene1372	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1375
BFO_1376	BFO_1376		BFO_1376	1468531	1469502	-	mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	identified by match to protein family HMM PF01476%3B match to protein family HMM PF01832	gene	gene1373	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1376
BFO_1377	BFO_1377		BFO_1377	1469560	1469712	-	hypothetical protein		gene	gene1374	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1377
BFO_1378	BFO_1378		BFO_1378	1469644	1470876	+	transposase%2C IS116/IS110/IS902 family	identified by match to protein family HMM PF02371	gene	gene1375	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1378
BFO_1379	BFO_1379		BFO_1379	1471378	1473456	+	cytochrome C biogenesis protein transmembrane region	identified by match to protein family HMM PF02683	gene	gene1376	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1379
BFO_1380	BFO_1380		BFO_1380	1473459	1474244	+	putative protein MazG	identified by match to protein family HMM PF03819%3B match to protein family HMM TIGR00444	gene	gene1377	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1380
BFO_1381	BFO_1381		BFO_1381	1474492	1477149	+	glycosyl hydrolase family 2%2C sugar binding domain protein	identified by match to protein family HMM PF00703%3B match to protein family HMM PF02836%3B match to protein family HMM PF02837	gene	gene1378	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1381
BFO_1382	BFO_1382		BFO_1382	1477241	1478581	+	transposase%2C IS4 family	identified by match to protein family HMM PF01609	gene	gene1379	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1382
BFO_1383	BFO_1383		BFO_1383	1478777	1481605	+	TonB-dependent receptor	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR01782	gene	gene1380	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1383
BFO_1384	BFO_1384		BFO_1384	1481611	1483248	+	putative lipoprotein		gene	gene1381	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1384
BFO_1385	BFO_1385		BFO_1385	1483286	1484833	+	hypothetical protein		gene	gene1382	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1385
BFO_1386	BFO_1386		BFO_1386	1484905	1486164	+	Ser/Thr phosphatase family protein	identified by match to protein family HMM PF00149	gene	gene1383	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1386
BFO_1387	BFO_1387		BFO_1387	1486307	1486507	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1384	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1387
BFO_1388	BFO_1388		BFO_1388	1486575	1488206	+	alpha-galactosidase		gene	gene1385	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1388
BFO_1389	BFO_1389	xerD	xerD	1488385	1489290	+	tyrosine recombinase XerD	identified by match to protein family HMM PF00589%3B match to protein family HMM PF02899%3B match to protein family HMM TIGR02225	gene	gene1386	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1389
BFO_1390	BFO_1390		BFO_1390	1489306	1490325	-	putative membrane protein		gene	gene1387	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1390
BFO_1391	BFO_1391	ksgA	ksgA	1490502	1491317	+	dimethyladenosine transferase	identified by match to protein family HMM PF00398%3B match to protein family HMM TIGR00755	gene	gene1388	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1391
BFO_1392	BFO_1392	corA	corA	1491322	1492269	+	magnesium and cobalt transport protein CorA	identified by match to protein family HMM PF01544%3B match to protein family HMM TIGR00383	gene	gene1389	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1392
BFO_1393	BFO_1393		BFO_1393	1492323	1493903	-	Mg chelatase-like protein	identified by match to protein family HMM PF01078%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR00368	gene	gene1390	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1393
BFO_1394	BFO_1394		BFO_1394	1493914	1494099	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1391	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1394
BFO_1395	BFO_1395		BFO_1395	1494069	1494773	+	putative precorrin-2 C(20)-methyltransferase	identified by match to protein family HMM PF00590	gene	gene1392	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1395
BFO_1396	BFO_1396		BFO_1396	1494819	1495946	-	putative membrane protein		gene	gene1393	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1396
BFO_1397	BFO_1397		BFO_1397	1495948	1497366	-	hypothetical protein		gene	gene1394	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1397
BFO_1398	BFO_1398		BFO_1398	1497356	1498921	-	SusD family protein	identified by match to protein family HMM PF07980	gene	gene1395	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1398
BFO_1399	BFO_1399		BFO_1399	1498933	1502403	-	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07660%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene1396	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1399
BFO_1400	BFO_1400		BFO_1400	1502670	1503266	+	RNA polymerase sigma-70 factor	identified by match to protein family HMM PF04542%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937%3B match to protein family HMM TIGR02985	gene	gene1397	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1400
BFO_1401	BFO_1401		BFO_1401	1504348	1505292	-	putative bactoprenol glucosyl transferase-like protein	identified by match to protein family HMM PF00535	gene	gene1399	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1401
BFO_1402	BFO_1402		BFO_1402	1503280	1504359	+	sigma factor regulatory protein%2C FecR/PupR family	identified by match to protein family HMM PF04773	gene	gene1398	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1402
BFO_1403	BFO_1403		BFO_1403	1505289	1505669	-	GtrA-like protein	identified by match to protein family HMM PF04138	gene	gene1400	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1403
BFO_1404	BFO_1404		BFO_1404	1505746	1506777	-	Tat pathway signal sequence domain protein	identified by match to protein family HMM PF00728%3B match to protein family HMM TIGR01409	gene	gene1401	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1404
BFO_1405	BFO_1405		BFO_1405	1506774	1508108	-	glycosyl hydrolase family 10	identified by match to protein family HMM PF00331	gene	gene1402	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1405
BFO_1406	BFO_1406		BFO_1406	1508225	1509769	-	SusD family protein	identified by match to protein family HMM PF07980	gene	gene1403	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1406
BFO_1407	BFO_1407		BFO_1407	1509791	1512979	-	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene1404	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1407
BFO_1408	BFO_1408		BFO_1408	1513150	1513377	-	hypothetical protein		gene	gene1405	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1408
BFO_1409	BFO_1409		BFO_1409	1513499	1514191	-	hypothetical protein		gene	gene1406	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1409
BFO_1410	BFO_1410		BFO_1410	1514198	1514887	-	putative lipoprotein		gene	gene1407	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1410
BFO_1411	BFO_1411		BFO_1411	1514912	1516465	-	tetratricopeptide repeat protein	identified by match to protein family HMM PF07719	gene	gene1408	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1411
BFO_1412	BFO_1412		BFO_1412	1516490	1519657	-	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene1409	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1412
BFO_1413	BFO_1413		BFO_1413	1519735	1519851	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1410	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1413
BFO_1414	BFO_1414	ychF	ychF	1519981	1521084	+	GTP-binding protein YchF	identified by match to protein family HMM PF01926%3B match to protein family HMM PF06071%3B match to protein family HMM TIGR00092	gene	gene1411	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1414
BFO_1415	BFO_1415		BFO_1415	1521135	1521875	+	hypothetical protein		gene	gene1412	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1415
BFO_1416	BFO_1416		BFO_1416	1522009	1522227	-	hypothetical protein		gene	gene1413	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1416
BFO_1417	BFO_1417		BFO_1417	1522327	1523937	+	hypothetical protein		gene	gene1414	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1417
BFO_1418	BFO_1418		BFO_1418	1524228	1524386	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1415	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1418
BFO_1419	BFO_1419		BFO_1419	1524385	1525197	+	papain family cysteine protease	identified by match to protein family HMM PF00112	gene	gene1416	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1419
BFO_1420	BFO_1420		BFO_1420	1525349	1525483	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1417	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1420
BFO_1421	BFO_1421		BFO_1421	1526015	1526230	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1418	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1421
BFO_1422	BFO_1422		BFO_1422	1526232	1528631	+	TonB-dependent receptor	identified by match to protein family HMM PF00593%3B match to protein family HMM PF05738%3B match to protein family HMM PF07715	gene	gene1419	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1422
BFO_1423	BFO_1423		BFO_1423	1529325	1529471	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1420	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1423
BFO_1424	BFO_1424		BFO_1424	1529557	1530867	+	radical SAM domain protein	identified by match to protein family HMM PF04055	gene	gene1421	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1424
BFO_1425	BFO_1425		BFO_1425	1530907	1533225	+	hypothetical protein		gene	gene1422	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1425
BFO_1426	BFO_1426		BFO_1426	1533230	1535434	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664%3B match to protein family HMM PF03412	gene	gene1423	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1426
BFO_1427	BFO_1427		BFO_1427	1535437	1535904	+	hypothetical protein		gene	gene1424	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1427
BFO_1428	BFO_1428		BFO_1428	1535979	1536740	-	Ser/Thr phosphatase family protein	identified by match to protein family HMM PF00149	gene	gene1425	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1428
BFO_1429	BFO_1429		BFO_1429	1536743	1537060	-	putative FeS assembly SUF system protein	identified by match to protein family HMM PF01883	gene	gene1426	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1429
BFO_1430	BFO_1430		BFO_1430	1537126	1537833	-	putative DNA repair protein RadC	identified by match to protein family HMM PF04002%3B match to protein family HMM TIGR00608	gene	gene1427	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1430
BFO_1431	BFO_1431	efp	efp	1537878	1538441	-	translation elongation factor P	identified by match to protein family HMM PF01132%3B match to protein family HMM PF08207%3B match to protein family HMM PF09285%3B match to protein family HMM TIGR00038	gene	gene1428	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1431
BFO_1432	BFO_1432		BFO_1432	1538555	1538722	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1429	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1432
BFO_1433	BFO_1433		BFO_1433	1538781	1538930	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1430	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1433
BFO_1434	BFO_1434		BFO_1434	1539154	1539627	-	adenylate cyclase	identified by match to protein family HMM PF01928	gene	gene1431	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1434
BFO_1435	BFO_1435		BFO_1435	1539632	1540696	-	Smr domain protein	identified by match to protein family HMM PF01713	gene	gene1432	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1435
BFO_1436	BFO_1436	groS	groS	1541016	1541285	+	chaperonin GroS	identified by match to protein family HMM PF00166	gene	gene1433	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1436
BFO_1437	BFO_1437	groL	groL	1541334	1542971	+	chaperonin GroL	identified by match to protein family HMM PF00118%3B match to protein family HMM TIGR02348	gene	gene1434	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1437
BFO_1438	BFO_1438		BFO_1438	1543061	1543750	-	comF family protein		gene	gene1435	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1438
BFO_1439	BFO_1439	recX	recX	1543731	1544246	-	regulatory protein RecX	identified by match to protein family HMM PF02631	gene	gene1436	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1439
BFO_1440	BFO_1440	prmC	prmC	1544231	1545139	-	protein-(glutamine-N5) methyltransferase%2C release factor-specific	identified by match to protein family HMM PF05175%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242%3B match to protein family HMM TIGR00536%3B match to protein family HMM TIGR03534	gene	gene1437	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1440
BFO_1441	BFO_1441	ribD	ribD	1545147	1546220	+	riboflavin biosynthesis protein RibD	identified by match to protein family HMM PF00383%3B match to protein family HMM PF01872%3B match to protein family HMM TIGR00326	gene	gene1438	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1441
BFO_1442	BFO_1442		BFO_1442	1546326	1547690	+	putative lipoprotein		gene	gene1439	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1442
BFO_1443	BFO_1443		BFO_1443	1547760	1548479	+	hypothetical protein		gene	gene1440	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1443
BFO_1444	BFO_1444	uppS	uppS	1548501	1549241	+	di-trans%2Cpoly-cis-decaprenylcistransferase	identified by match to protein family HMM PF01255%3B match to protein family HMM TIGR00055	gene	gene1441	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1444
BFO_1445	BFO_1445		BFO_1445	1549254	1551956	+	outer membrane protein%2C OMP85 family	identified by match to protein family HMM PF01103%3B match to protein family HMM PF07244	gene	gene1442	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1445
BFO_1446	BFO_1446		BFO_1446	1552038	1552556	+	outer membrane protein	identified by match to protein family HMM PF03938	gene	gene1443	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1446
BFO_1447	BFO_1447		BFO_1447	1552621	1553115	+	outer membrane protein	identified by match to protein family HMM PF03938	gene	gene1444	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1447
BFO_1448	BFO_1448	murI	murI	1553199	1554026	+	glutamate racemase	identified by match to protein family HMM PF01177%3B match to protein family HMM TIGR00067	gene	gene1445	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1448
BFO_1449	BFO_1449		BFO_1449	1554036	1554725	+	putative D-Ala-D-Ala dipeptidase	identified by match to protein family HMM PF01427%3B match to protein family HMM PF02557	gene	gene1446	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1449
BFO_1450	BFO_1450		BFO_1450	1554733	1555101	-	hypothetical protein	identified by match to protein family HMM PF03733	gene	gene1447	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1450
BFO_1451	BFO_1451		BFO_1451	1555150	1555905	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene1448	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1451
BFO_1452	BFO_1452		BFO_1452	1555921	1557999	-	efflux ABC transporter%2C permease protein	identified by match to protein family HMM PF01297%3B match to protein family HMM PF02687	gene	gene1449	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1452
BFO_1453	BFO_1453	rbfA	rbfA	1558007	1558342	-	ribosome-binding factor A	identified by match to protein family HMM PF02033%3B match to protein family HMM TIGR00082	gene	gene1450	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1453
BFO_1454	BFO_1454		BFO_1454	1558561	1559355	-	endonuclease/exonuclease/phosphatase family protein	identified by match to protein family HMM PF03372	gene	gene1451	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1454
BFO_1455	BFO_1455		BFO_1455	1559531	1561072	-	SusD family protein	identified by match to protein family HMM PF07980	gene	gene1452	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1455
BFO_1456	BFO_1456		BFO_1456	1561085	1564489	-	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07660%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene1453	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1456
BFO_1457	BFO_1457		BFO_1457	1564751	1565734	-	sigma factor regulatory protein%2C FecR/PupR family	identified by match to protein family HMM PF04773	gene	gene1454	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1457
BFO_1458	BFO_1458		BFO_1458	1565844	1566413	-	RNA polymerase sigma-70 factor	identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937%3B match to protein family HMM TIGR02985	gene	gene1455	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1458
BFO_1459	BFO_1459		BFO_1459	1566511	1567140	-	O-methyltransferase	identified by match to protein family HMM PF01596	gene	gene1456	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1459
BFO_1460	BFO_1460	pyk	pyk	1567159	1568604	-	pyruvate kinase	identified by match to protein family HMM PF00224%3B match to protein family HMM PF02887%3B match to protein family HMM TIGR01064	gene	gene1457	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1460
BFO_1461	BFO_1461	aroQ	aroQ	1568601	1569020	-	3-dehydroquinate dehydratase%2C type II	identified by match to protein family HMM PF01220%3B match to protein family HMM TIGR01088	gene	gene1458	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1461
BFO_1462	BFO_1462		BFO_1462	1569061	1569219	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1459	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1462
BFO_1463	BFO_1463		BFO_1463	1569279	1569980	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1460	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1463
BFO_1464	BFO_1464		BFO_1464	1569979	1570164	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1461	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1464
BFO_1465	BFO_1465		BFO_1465	1570340	1571362	-	radical SAM domain protein	identified by match to protein family HMM PF04055	gene	gene1462	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1465
BFO_1466	BFO_1466		BFO_1466	1571996	1572631	+	hypothetical protein		gene	gene1463	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1466
BFO_1467	BFO_1467		BFO_1467	1572695	1573168	+	hypothetical protein		gene	gene1464	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1467
BFO_1468	BFO_1468		BFO_1468	1574699	1576918	-	putative GTP diphosphokinase	identified by match to protein family HMM PF02824%3B match to protein family HMM PF04607%3B match to protein family HMM TIGR00691	gene	gene1466	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1468
BFO_1469	BFO_1469		BFO_1469	1573283	1574710	+	tRNA nucleotidyltransferase/poly(A) polymerase family protein	identified by match to protein family HMM PF01743%3B match to protein family HMM PF01966	gene	gene1465	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1469
BFO_1470	BFO_1470		BFO_1470	1577003	1577653	-	HAD hydrolase%2C family IA%2C variant 3	identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509%3B match to protein family HMM TIGR01549	gene	gene1467	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1470
BFO_1471	BFO_1471		BFO_1471	1578149	1578310	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1468	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1471
BFO_1472	BFO_1472		BFO_1472	1578769	1579743	+	hypothetical protein		gene	gene1469	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1472
BFO_1473	BFO_1473		BFO_1473	1580040	1580408	+		conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1470	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1473
BFO_1474	BFO_1474		BFO_1474	1580405	1581283	+	hypothetical protein		gene	gene1471	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1474
BFO_1475	BFO_1475		BFO_1475	1581292	1581885	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1472	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1475
BFO_1476	BFO_1476		BFO_1476	1582462	1582722	+	hypothetical protein		gene	gene1473	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1476
BFO_1478	BFO_1478		BFO_1478	1583380	1585047	+	hypothetical protein		gene	gene1474	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1478
BFO_1479	BFO_1479		BFO_1479	1585111	1585431	+	hypothetical protein		gene	gene1475	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1479
BFO_1480	BFO_1480		BFO_1480	1585537	1585935	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1476	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1480
BFO_1481	BFO_1481		BFO_1481	1585787	1586656	+		transposase%2C IS4 family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01609	pseudogene	gene1477	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1481
BFO_1482	BFO_1482		BFO_1482	1587222	1587368	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1478	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1482
BFO_1484	BFO_1484	abfD	abfD	1587995	1589455	+	gamma-aminobutyrate metabolism dehydratase/isomerase	identified by match to protein family HMM PF03241	gene	gene1479	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1484
BFO_1485	BFO_1485		BFO_1485	1589460	1589777	+	NifU-like protein	identified by match to protein family HMM PF01106	gene	gene1480	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1485
BFO_1486	BFO_1486	cat	cat	1589780	1591072	+	4-hydroxybutyrate coenzyme A transferase	identified by match to protein family HMM PF02550	gene	gene1481	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1486
BFO_1487	BFO_1487		BFO_1487	1591105	1592220	+	alcohol dehydrogenase%2C iron-dependent	identified by match to protein family HMM PF00465	gene	gene1482	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1487
BFO_1488	BFO_1488		BFO_1488	1592233	1593591	+	aldehyde-alcohol dehydrogenase family protein	identified by match to protein family HMM PF00171	gene	gene1483	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1488
BFO_1489	BFO_1489	bcd	bcd	1593617	1594765	+	butyryl-CoA dehydrogenase	identified by match to protein family HMM PF00441%3B match to protein family HMM PF02770%3B match to protein family HMM PF02771%3B match to protein family HMM PF08028	gene	gene1484	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1489
BFO_1490	BFO_1490	etfB_2	etfB_2	1594772	1595554	+	electron transfer flavoprotein subunit beta	identified by match to protein family HMM PF01012	gene	gene1485	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1490
BFO_1491	BFO_1491	etfA_2	etfA_2	1595578	1596585	+	electron transfer flavoprotein subunit alpha	identified by match to protein family HMM PF00766%3B match to protein family HMM PF01012	gene	gene1486	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1491
BFO_1492	BFO_1492		BFO_1492	1596677	1597153	-	thioesterase family protein	identified by match to protein family HMM PF03061	gene	gene1487	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1492
BFO_1493	BFO_1493		BFO_1493	1597253	1598002	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene1488	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1493
BFO_1494	BFO_1494		BFO_1494	1599054	1600880	-	DNA mismatch repair protein%2C C-terminal domain protein	identified by match to protein family HMM PF01119%3B match to protein family HMM PF02518%3B match to protein family HMM PF08676%3B match to protein family HMM TIGR00585	gene	gene1489	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1494
BFO_1495	BFO_1495		BFO_1495	1600877	1601188	-	hypothetical protein		gene	gene1490	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1495
BFO_1496	BFO_1496		BFO_1496	1601204	1602808	-	hypothetical protein		gene	gene1491	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1496
BFO_1497	BFO_1497		BFO_1497	1602805	1604121	-	PPIC-type PPIASE domain protein	identified by match to protein family HMM PF00639	gene	gene1492	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1497
BFO_1498	BFO_1498		BFO_1498	1604180	1605031	-	hypothetical protein		gene	gene1493	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1498
BFO_1499	BFO_1499		BFO_1499	1605066	1606664	-	putative peptidylprolyl isomerase PrsA1	identified by match to protein family HMM PF00639	gene	gene1494	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1499
BFO_1500	BFO_1500	recQ	recQ	1606702	1609062	-	ATP-dependent DNA helicase RecQ	identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF00570%3B match to protein family HMM PF09382%3B match to protein family HMM TIGR00614%3B match to protein family HMM TIGR01389	gene	gene1495	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1500
BFO_1501	BFO_1501	clpX	clpX	1609089	1610318	-	ATP-dependent Clp protease%2C ATP-binding subunit ClpX	identified by match to protein family HMM PF00004%3B match to protein family HMM PF06689%3B match to protein family HMM PF07724%3B match to protein family HMM TIGR00382	gene	gene1496	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1501
BFO_1502	BFO_1502	clpP	clpP	1610336	1611001	-	ATP-dependent Clp endopeptidase%2C proteolytic subunit ClpP	identified by match to protein family HMM PF00574	gene	gene1497	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1502
BFO_1503	BFO_1503	tig	tig	1611015	1612376	-	trigger factor	identified by match to protein family HMM PF05697%3B match to protein family HMM TIGR00115	gene	gene1498	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1503
BFO_1504	BFO_1504		BFO_1504	1612520	1612645	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1499	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1504
BFO_1505	BFO_1505		BFO_1505	1612687	1612932	+	hypothetical protein	identified by match to protein family HMM PF00076	gene	gene1500	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1505
BFO_1506	BFO_1506		BFO_1506	1613024	1613902	+		CAAX amino terminal protease family protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02517	pseudogene	gene1501	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1506
BFO_1507	BFO_1507		BFO_1507	1613920	1614399	-	hypothetical protein		gene	gene1502	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1507
BFO_1508	BFO_1508		BFO_1508	1614406	1614792	-	hypothetical protein		gene	gene1503	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1508
BFO_1509	BFO_1509		BFO_1509	1614845	1615576	-	Sigma-70 region 2	identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937	gene	gene1504	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1509
BFO_1510	BFO_1510		BFO_1510	1615547	1617565	+	TonB-dependent receptor	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715	gene	gene1505	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1510
BFO_1511	BFO_1511	recG	recG	1618318	1620411	+	ATP-dependent DNA helicase RecG	identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF01336%3B match to protein family HMM TIGR00643	gene	gene1506	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1511
BFO_1512	BFO_1512		BFO_1512	1620450	1621694	-	peptidase%2C M23 family	identified by match to protein family HMM PF01551	gene	gene1507	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1512
BFO_1513	BFO_1513		BFO_1513	1621691	1622521	-	hypothetical protein		gene	gene1508	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1513
BFO_1514	BFO_1514		BFO_1514	1622511	1624295	-	tetratricopeptide repeat protein	identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719%3B match to protein family HMM PF07720	gene	gene1509	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1514
BFO_1515	BFO_1515	dut	dut	1624332	1624766	-	dUTP diphosphatase	identified by match to protein family HMM PF00692%3B match to protein family HMM TIGR00576	gene	gene1510	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1515
BFO_1516	BFO_1516		BFO_1516	1624888	1625613	-	nitroreductase family protein	identified by match to protein family HMM PF00881	gene	gene1511	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1516
BFO_1517	BFO_1517		BFO_1517	1625684	1626787	-	endonuclease/exonuclease/phosphatase family protein	identified by match to protein family HMM PF03372	gene	gene1512	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1517
BFO_1518	BFO_1518		BFO_1518	1626801	1628309	-	putative lipoprotein		gene	gene1513	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1518
BFO_1519	BFO_1519		BFO_1519	1628321	1631704	-	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene1514	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1519
BFO_1520	BFO_1520		BFO_1520	1631735	1632751	-	sigma factor regulatory protein%2C FecR/PupR family	identified by match to protein family HMM PF04773	gene	gene1515	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1520
BFO_1521	BFO_1521		BFO_1521	1633444	1634193	-	nucleotidyl transferase	identified by match to protein family HMM PF00483	gene	gene1517	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1521
BFO_1522	BFO_1522		BFO_1522	1632874	1633449	+	RNA polymerase sigma-70 factor	identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937%3B match to protein family HMM TIGR02985	gene	gene1516	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1522
BFO_1523	BFO_1523		BFO_1523	1634190	1635623	-	phosphotransferase enzyme family	identified by match to protein family HMM PF01636	gene	gene1518	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1523
BFO_1524	BFO_1524		BFO_1524	1635858	1637882	+	peptidase family M49	identified by match to protein family HMM PF03571	gene	gene1519	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1524
BFO_1525	BFO_1525		BFO_1525	1637923	1638408	+	transcriptional regulator%2C Fur family	identified by match to protein family HMM PF01475	gene	gene1520	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1525
BFO_1526	BFO_1526	purA	purA	1638443	1639714	+	adenylosuccinate synthase	identified by match to protein family HMM PF00709%3B match to protein family HMM TIGR00184	gene	gene1521	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1526
BFO_1527	BFO_1527		BFO_1527	1639827	1640513	+	putative neutral zinc metallopeptidase	identified by match to protein family HMM PF04298	gene	gene1522	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1527
BFO_1528	BFO_1528	hisS	hisS	1640517	1641878	+	histidine--tRNA ligase	identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM TIGR00442	gene	gene1523	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1528
BFO_1529	BFO_1529		BFO_1529	1642060	1643802	-	peptidase%2C S8/S53 family	identified by match to protein family HMM PF00082	gene	gene1524	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1529
BFO_1530	BFO_1530		BFO_1530	1643818	1644609	-	putative lipoprotein		gene	gene1525	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1530
BFO_1531	BFO_1531		BFO_1531	1644614	1645399	-	hypothetical protein		gene	gene1526	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1531
BFO_1532	BFO_1532		BFO_1532	1645445	1645801	-	hypothetical protein		gene	gene1527	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1532
BFO_1533	BFO_1533		BFO_1533	1645832	1646515	-		conserved domain protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene1528	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1533
BFO_1534	BFO_1534		BFO_1534	1646691	1647932	+	transposase	identified by match to protein family HMM PF01610	gene	gene1529	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1534
BFO_1535	BFO_1535		BFO_1535	1648321	1650420	+	DNA topoisomerase	identified by match to protein family HMM PF01131	gene	gene1530	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1535
BFO_1536	BFO_1536		BFO_1536	1650451	1650963	-	Sigma-70 region 2	identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937	gene	gene1531	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1536
BFO_1537	BFO_1537		BFO_1537	1651096	1651590	-	putative cytidine deaminase	identified by match to protein family HMM PF00383	gene	gene1532	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1537
BFO_1539	BFO_1539	metK	metK	1652014	1653303	+	methionine adenosyltransferase	identified by match to protein family HMM PF00438%3B match to protein family HMM PF02772%3B match to protein family HMM PF02773%3B match to protein family HMM TIGR01034	gene	gene1533	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1539
BFO_1540	BFO_1540		BFO_1540	1653438	1653563	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1534	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1540
BFO_1541	BFO_1541	rpsL	rpsL	1654015	1654404	+	ribosomal protein S12	identified by match to protein family HMM PF00164%3B match to protein family HMM TIGR00981	gene	gene1535	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1541
BFO_1542	BFO_1542	rpsG	rpsG	1654488	1655045	+	ribosomal protein S7	identified by match to protein family HMM PF00177%3B match to protein family HMM TIGR01029	gene	gene1536	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1542
BFO_1543	BFO_1543	fusA	fusA	1655045	1657192	+	translation elongation factor G	identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF03764%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00484	gene	gene1537	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1543
BFO_1544	BFO_1544	rpsJ	rpsJ	1657210	1657515	+	ribosomal protein S10	identified by match to protein family HMM PF00338%3B match to protein family HMM TIGR01049	gene	gene1538	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1544
BFO_1545	BFO_1545	rplC	rplC	1657535	1658152	+	50S ribosomal protein L3	identified by match to protein family HMM PF00297%3B match to protein family HMM TIGR03625	gene	gene1539	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1545
BFO_1546	BFO_1546	rplD	rplD	1658157	1658786	+	50S ribosomal protein L4	identified by match to protein family HMM PF00573%3B match to protein family HMM TIGR03953	gene	gene1540	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1546
BFO_1547	BFO_1547	rplW	rplW	1658803	1659096	+	ribosomal protein L23	identified by match to protein family HMM PF00276	gene	gene1541	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1547
BFO_1548	BFO_1548	rplB	rplB	1659103	1659927	+	ribosomal protein L2	identified by match to protein family HMM PF00181%3B match to protein family HMM PF03947%3B match to protein family HMM TIGR01171	gene	gene1542	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1548
BFO_1549	BFO_1549		BFO_1549	1660169	1660333	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1544	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1549
BFO_1550	BFO_1550	rpsS	rpsS	1659947	1660213	+	ribosomal protein S19	identified by match to protein family HMM PF00203%3B match to protein family HMM TIGR01050	gene	gene1543	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1550
BFO_1551	BFO_1551	rplV	rplV	1660236	1660667	+	50S ribosomal protein L22	identified by match to protein family HMM PF00237	gene	gene1545	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1551
BFO_1552	BFO_1552	rpsC	rpsC	1660674	1661447	+	ribosomal protein S3	identified by match to protein family HMM PF00189%3B match to protein family HMM PF00417%3B match to protein family HMM PF07650%3B match to protein family HMM TIGR01009	gene	gene1546	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1552
BFO_1553	BFO_1553	rplP	rplP	1661470	1661904	+	ribosomal protein L16	identified by match to protein family HMM PF00252%3B match to protein family HMM TIGR01164	gene	gene1547	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1553
BFO_1554	BFO_1554	rpmC	rpmC	1661910	1662107	+	ribosomal protein L29	identified by match to protein family HMM PF00831%3B match to protein family HMM TIGR00012	gene	gene1548	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1554
BFO_1555	BFO_1555	rpsQ	rpsQ	1662110	1662379	+	30S ribosomal protein S17	identified by match to protein family HMM PF00366%3B match to protein family HMM TIGR03635	gene	gene1549	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1555
BFO_1556	BFO_1556	rplN	rplN	1662381	1662746	+	ribosomal protein L14	identified by match to protein family HMM PF00238%3B match to protein family HMM TIGR01067	gene	gene1550	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1556
BFO_1557	BFO_1557	rplX	rplX	1662766	1663083	+	ribosomal protein L24	identified by match to protein family HMM PF00467%3B match to protein family HMM TIGR01079	gene	gene1551	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1557
BFO_1558	BFO_1558	rplE	rplE	1663080	1663640	+	ribosomal protein L5	identified by match to protein family HMM PF00281%3B match to protein family HMM PF00673	gene	gene1552	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1558
BFO_1559	BFO_1559	rpsN	rpsN	1663644	1663913	+	ribosomal protein S14p/S29e	identified by match to protein family HMM PF00253	gene	gene1553	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1559
BFO_1560	BFO_1560	rpsH	rpsH	1663984	1664379	+	ribosomal protein S8	identified by match to protein family HMM PF00410	gene	gene1554	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1560
BFO_1561	BFO_1561	rplF	rplF	1664351	1664950	+	ribosomal protein L6	identified by match to protein family HMM PF00347%3B match to protein family HMM TIGR03654	gene	gene1555	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1561
BFO_1562	BFO_1562	rplR	rplR	1664975	1665319	+	ribosomal protein L18	identified by match to protein family HMM PF00861%3B match to protein family HMM TIGR00060	gene	gene1556	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1562
BFO_1563	BFO_1563	rpsE	rpsE	1665325	1665840	+	ribosomal protein S5	identified by match to protein family HMM PF00333%3B match to protein family HMM PF03719%3B match to protein family HMM TIGR01021	gene	gene1557	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1563
BFO_1564	BFO_1564	rpmD	rpmD	1665858	1666034	+	ribosomal protein L30	identified by match to protein family HMM PF00327%3B match to protein family HMM TIGR01308	gene	gene1558	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1564
BFO_1565	BFO_1565	rplO	rplO	1666087	1666557	+	ribosomal protein L15	identified by match to protein family HMM PF00256%3B match to protein family HMM PF01305%3B match to protein family HMM TIGR01071	gene	gene1559	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1565
BFO_1566	BFO_1566	secY	secY	1666560	1667900	+	preprotein translocase%2C SecY subunit	identified by match to protein family HMM PF00344%3B match to protein family HMM TIGR00967	gene	gene1560	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1566
BFO_1567	BFO_1567	map	map	1667903	1668685	+	methionine aminopeptidase%2C type I	identified by match to protein family HMM PF00557%3B match to protein family HMM TIGR00500	gene	gene1561	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1567
BFO_1568	BFO_1568	infA	infA	1668689	1668907	+	translation initiation factor IF-1	identified by match to protein family HMM PF00575%3B match to protein family HMM PF01176%3B match to protein family HMM TIGR00008	gene	gene1562	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1568
BFO_1569	BFO_1569	rpmJ	rpmJ	1668933	1669049	+	ribosomal protein L36	identified by match to protein family HMM PF00444%3B match to protein family HMM TIGR01022	gene	gene1563	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1569
BFO_1570	BFO_1570	rpsM	rpsM	1669085	1669465	+	30S ribosomal protein S13	identified by match to protein family HMM PF00416%3B match to protein family HMM TIGR03631	gene	gene1564	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1570
BFO_1571	BFO_1571	rpsK	rpsK	1669475	1669864	+	30S ribosomal protein S11	identified by match to protein family HMM PF00411%3B match to protein family HMM TIGR03632	gene	gene1565	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1571
BFO_1572	BFO_1572	rpsD	rpsD	1669979	1670584	+	ribosomal protein S4	identified by match to protein family HMM PF00163%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR01017	gene	gene1566	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1572
BFO_1573	BFO_1573	rpoA	rpoA	1670592	1671584	+	DNA-directed RNA polymerase%2C alpha subunit	identified by match to protein family HMM PF01000%3B match to protein family HMM PF01193%3B match to protein family HMM PF03118%3B match to protein family HMM TIGR02027	gene	gene1567	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1573
BFO_1574	BFO_1574	rplQ	rplQ	1671591	1672070	+	ribosomal protein L17	identified by match to protein family HMM PF01196%3B match to protein family HMM TIGR00059	gene	gene1568	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1574
BFO_1575	BFO_1575		BFO_1575	1672207	1672980	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene1569	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1575
BFO_1576	BFO_1576		BFO_1576	1672980	1673723	-	hypothetical protein	identified by match to protein family HMM PF02405	gene	gene1570	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1576
BFO_1577	BFO_1577		BFO_1577	1674038	1674178	-	hypothetical protein		gene	gene1571	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1577
BFO_1578	BFO_1578		BFO_1578	1674186	1674761	-	hypothetical protein		gene	gene1572	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1578
BFO_1579	BFO_1579		BFO_1579	1674730	1674909	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1573	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1579
BFO_1580	BFO_1580		BFO_1580	1674891	1676129	-	putative coproporphyrinogen dehydrogenase	identified by match to protein family HMM PF04055%3B match to protein family HMM PF06969%3B match to protein family HMM TIGR00539	gene	gene1574	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1580
BFO_1581	BFO_1581		BFO_1581	1676211	1678367	+	putative translation elongation factor G	identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF03764%3B match to protein family HMM TIGR00231	gene	gene1575	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1581
BFO_1582	BFO_1582		BFO_1582	1678833	1680266	+	transposase%2C IS4 family	identified by match to protein family HMM PF01609	gene	gene1576	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1582
BFO_1583	BFO_1583		BFO_1583	1680415	1681617	-	transposase%2C IS116/IS110/IS902 family	identified by match to protein family HMM PF02371	gene	gene1577	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1583
BFO_1584	BFO_1584		BFO_1584	1681579	1681818	+	hypothetical protein		gene	gene1578	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1584
BFO_1585	BFO_1585		BFO_1585	1681857	1685507	+	hypothetical protein	identified by match to protein family HMM PF02415	gene	gene1579	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1585
BFO_1586	BFO_1586		BFO_1586	1685656	1686939	-	amino acid permease	identified by match to protein family HMM PF00324	gene	gene1580	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1586
BFO_1587	BFO_1587		BFO_1587	1686950	1687816	-	putative lipoprotein		gene	gene1581	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1587
BFO_1588	BFO_1588		BFO_1588	1687858	1689414	-	hypothetical protein		gene	gene1582	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1588
BFO_1589	BFO_1589		BFO_1589	1689441	1690676	-	putative lipoprotein		gene	gene1583	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1589
BFO_1590	BFO_1590		BFO_1590	1690690	1693548	-	TonB-dependent receptor	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715	gene	gene1584	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1590
BFO_1591	BFO_1591		BFO_1591	1693815	1694651	+	phospholipase%2C patatin family	identified by match to protein family HMM PF01734	gene	gene1585	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1591
BFO_1592	BFO_1592		BFO_1592	1694660	1696363	+	alpha amylase%2C catalytic domain protein	identified by match to protein family HMM PF00128	gene	gene1586	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1592
BFO_1593	BFO_1593	prs	prs	1696465	1697409	+	ribose-phosphate diphosphokinase	identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01251	gene	gene1587	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1593
BFO_1594	BFO_1594		BFO_1594	1697498	1697839	+	cupin domain protein	identified by match to protein family HMM PF00190%3B match to protein family HMM PF07883	gene	gene1588	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1594
BFO_1595	BFO_1595	trmU	trmU	1697860	1699197	-	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase	identified by match to protein family HMM PF03054%3B match to protein family HMM TIGR00420	gene	gene1589	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1595
BFO_1596	BFO_1596		BFO_1596	1699355	1699972	+	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene1590	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1596
BFO_1597	BFO_1597		BFO_1597	1700184	1702532	+	putative membrane protein		gene	gene1591	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1597
BFO_1598	BFO_1598		BFO_1598	1702632	1704974	+	TonB-dependent receptor plug domain protein	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715	gene	gene1592	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1598
BFO_1599	BFO_1599		BFO_1599	1705037	1706251	+	putative lipoprotein		gene	gene1593	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1599
BFO_1600	BFO_1600		BFO_1600	1706462	1706617	+	hypothetical protein		gene	gene1594	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1600
BFO_1601	BFO_1601		BFO_1601	1706614	1707345	+	hypothetical protein		gene	gene1595	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1601
BFO_1602	BFO_1602		BFO_1602	1707384	1707506	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1596	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1602
BFO_1603	BFO_1603		BFO_1603	1707519	1708964	+	peptidase%2C C69 family	identified by match to protein family HMM PF03577	gene	gene1597	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1603
BFO_1604	BFO_1604		BFO_1604	1709213	1709941	+	nitroreductase family protein	identified by match to protein family HMM PF00881	gene	gene1598	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1604
BFO_1605	BFO_1605		BFO_1605	1709981	1710769	+	hypothetical protein		gene	gene1599	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1605
BFO_1606	BFO_1606		BFO_1606	1710847	1711257	+	S23 ribosomal protein	identified by match to protein family HMM PF05635	gene	gene1600	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1606
BFO_1607	BFO_1607		BFO_1607	1711254	1712498	+	hypothetical protein		gene	gene1601	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1607
BFO_1608	BFO_1608		BFO_1608	1712698	1713336	+	putative membrane protein		gene	gene1602	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1608
BFO_1609	BFO_1609		BFO_1609	1713346	1713909	+	hypothetical protein		gene	gene1603	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1609
BFO_1610	BFO_1610		BFO_1610	1714247	1716592	+	TonB-dependent receptor plug domain protein	identified by match to protein family HMM PF07715	gene	gene1604	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1610
BFO_1611	BFO_1611		BFO_1611	1716589	1717872	+	hypothetical protein		gene	gene1605	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1611
BFO_1612	BFO_1612		BFO_1612	1717992	1718813	+	metal cation transporter%2C ZIP family	identified by match to protein family HMM PF02535	gene	gene1606	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1612
BFO_1613	BFO_1613		BFO_1613	1718931	1719506	+	hypothetical protein		gene	gene1607	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1613
BFO_1614	BFO_1614		BFO_1614	1719537	1720328	+	methyltransferase domain protein	identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene1608	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1614
BFO_1615	BFO_1615		BFO_1615	1720344	1720964	+	methyltransferase domain protein	identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene1609	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1615
BFO_1616	BFO_1616		BFO_1616	1721043	1721696	+	methyltransferase domain protein	identified by match to protein family HMM PF01209%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene1610	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1616
BFO_1617	BFO_1617		BFO_1617	1721775	1722590	+	hypothetical protein		gene	gene1611	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1617
BFO_1618	BFO_1618		BFO_1618	1722687	1723454	+	methyltransferase domain protein	identified by match to protein family HMM PF08241	gene	gene1612	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1618
BFO_1619	BFO_1619		BFO_1619	1723501	1724076	+	hypothetical protein		gene	gene1613	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1619
BFO_1620	BFO_1620		BFO_1620	1724073	1724468	+	glyoxalase family protein	identified by match to protein family HMM PF00903	gene	gene1614	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1620
BFO_1621	BFO_1621		BFO_1621	1724656	1724784	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1615	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1621
BFO_1622	BFO_1622		BFO_1622	1724790	1726541	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664	gene	gene1616	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1622
BFO_1623	BFO_1623		BFO_1623	1726618	1726983	-	TIGR02436 family protein	identified by match to protein family HMM TIGR02436	gene	gene1617	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1623
BFO_1624	BFO_1624		BFO_1624	1727071	1728801	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664%3B match to protein family HMM PF02463	gene	gene1618	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1624
BFO_1625	BFO_1625	glsA	glsA	1728873	1729799	+	glutaminase A	identified by match to protein family HMM PF04960%3B match to protein family HMM TIGR03814	gene	gene1619	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1625
BFO_1626	BFO_1626		BFO_1626	1729921	1730655	+	hypothetical protein		gene	gene1620	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1626
BFO_1627	BFO_1627		BFO_1627	1730762	1731751	+	putative cadmium%2C cobalt and zinc/H(+)-K(+) antiporter	identified by match to protein family HMM PF01545%3B match to protein family HMM TIGR01297	gene	gene1621	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1627
BFO_1628	BFO_1628		BFO_1628	1732325	1732438	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1622	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1628
BFO_1629	BFO_1629	ribF	ribF	1732458	1733432	+	riboflavin biosynthesis protein RibF	identified by match to protein family HMM PF01687%3B match to protein family HMM PF06574%3B match to protein family HMM TIGR00083	gene	gene1623	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1629
BFO_1630	BFO_1630		BFO_1630	1733454	1734527	+	peptidase dimerization domain protein	identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687	gene	gene1624	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1630
BFO_1631	BFO_1631		BFO_1631	1734521	1735771	+	polysaccharide biosynthesis protein	identified by match to protein family HMM PF01943	gene	gene1625	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1631
BFO_1632	BFO_1632		BFO_1632	1735832	1736452	-	thiamine diphosphokinase	identified by match to protein family HMM PF04263%3B match to protein family HMM TIGR01378	gene	gene1626	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1632
BFO_1633	BFO_1633		BFO_1633	1736594	1737706	+	bacterial group 2 Ig-like protein	identified by match to protein family HMM PF02368	gene	gene1627	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1633
BFO_1634	BFO_1634		BFO_1634	1737775	1739397	+	bacterial group 2 Ig-like protein	identified by match to protein family HMM PF02368	gene	gene1628	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1634
BFO_1635	BFO_1635		BFO_1635	1739570	1740805	-	anaerobic sulfatase maturase	identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR03942	gene	gene1629	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1635
BFO_1636	BFO_1636	sdhC	sdhC	1741048	1741737	+	succinate dehydrogenase cytochrome B subunit%2C b558 family	identified by match to protein family HMM TIGR02046	gene	gene1630	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1636
BFO_1637	BFO_1637	sdhA	sdhA	1741779	1743719	+	succinate dehydrogenase flavoprotein subunit	identified by match to protein family HMM PF00890%3B match to protein family HMM PF02910%3B match to protein family HMM TIGR01811	gene	gene1631	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1637
BFO_1638	BFO_1638		BFO_1638	1743751	1744506	+	succinate dehydrogenase/fumarate reductase iron-sulfur subunit	identified by match to protein family HMM PF00037	gene	gene1632	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1638
BFO_1639	BFO_1639		BFO_1639	1744595	1744714	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1633	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1639
BFO_1640	BFO_1640	argS	argS	1745469	1747259	+	arginine--tRNA ligase	identified by match to protein family HMM PF00750%3B match to protein family HMM PF03485%3B match to protein family HMM PF05746%3B match to protein family HMM TIGR00456	gene	gene1634	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1640
BFO_1641	BFO_1641	topA	topA	1747317	1749659	-	DNA topoisomerase I	identified by match to protein family HMM PF01131%3B match to protein family HMM PF01751%3B match to protein family HMM TIGR01051	gene	gene1635	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1641
BFO_1642	BFO_1642		BFO_1642	1749698	1749829	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1636	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1642
BFO_1643	BFO_1643	valS	valS	1749853	1752522	+	valine--tRNA ligase	identified by match to protein family HMM PF00133%3B match to protein family HMM PF08264%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00422	gene	gene1637	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1643
BFO_1644	BFO_1644		BFO_1644	1752512	1753573	+	tetratricopeptide repeat protein		gene	gene1638	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1644
BFO_1645	BFO_1645		BFO_1645	1753932	1755173	+	transposase	identified by match to protein family HMM PF01610	gene	gene1639	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1645
BFO_1646	BFO_1646		BFO_1646	1755348	1755755	+	hypothetical protein		gene	gene1640	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1646
BFO_1647	BFO_1647		BFO_1647	1755831	1755906	+	tRNA-Thr		tRNA	gene1641	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1647
BFO_1648	BFO_1648		BFO_1648	1756070	1756240	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1642	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1648
BFO_1649	BFO_1649		BFO_1649	1756313	1757965	+		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene1643	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1649
BFO_1650	BFO_1650		BFO_1650	1758065	1759831	+		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene1644	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1650
BFO_1651	BFO_1651		BFO_1651	1760001	1760492	-	hypothetical protein		gene	gene1645	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1651
BFO_1652	BFO_1652		BFO_1652	1760463	1764023	+	hypothetical protein		gene	gene1646	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1652
BFO_1653	BFO_1653		BFO_1653	1764173	1764325	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1647	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1653
BFO_1654	BFO_1654		BFO_1654	1764592	1764711	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1648	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1654
BFO_1655	BFO_1655		BFO_1655	1764751	1764885	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1649	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1655
BFO_1656	BFO_1656		BFO_1656	1765245	1765358	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1650	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1656
BFO_1657	BFO_1657		BFO_1657	1765553	1765672	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1651	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1657
BFO_1658	BFO_1658		BFO_1658	1765712	1766644	+	radical SAM protein%2C TIGR01212 family	identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR01212	gene	gene1652	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1658
BFO_1659	BFO_1659		BFO_1659	1766695	1768863	+	peptidase%2C S9A/B/C family%2C catalytic domain protein	identified by match to protein family HMM PF00326%3B match to protein family HMM PF00930%3B match to protein family HMM PF02129	gene	gene1653	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1659
BFO_1660	BFO_1660	lipA	lipA	1768863	1769714	+	lipoyl synthase	identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR00510	gene	gene1654	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1660
BFO_1661	BFO_1661		BFO_1661	1770950	1771474	-	phosphodiesterase family protein	identified by match to protein family HMM PF00149	gene	gene1656	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1661
BFO_1662	BFO_1662		BFO_1662	1769764	1770972	+	hypothetical protein		gene	gene1655	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1662
BFO_1663	BFO_1663		BFO_1663	1771638	1772318	-	hypothetical protein		gene	gene1657	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1663
BFO_1664	BFO_1664		BFO_1664	1772419	1773528	-	hypothetical protein		gene	gene1658	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1664
BFO_1665	BFO_1665	aspC	aspC	1773583	1774776	-	aspartate transaminase	identified by match to protein family HMM PF00155	gene	gene1659	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1665
BFO_1666	BFO_1666	ribA	ribA	1774810	1776021	-	GTP cyclohydrolase II	identified by match to protein family HMM PF00925%3B match to protein family HMM PF00926%3B match to protein family HMM TIGR00505%3B match to protein family HMM TIGR00506	gene	gene1660	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1666
BFO_1667	BFO_1667		BFO_1667	1775999	1777897	-	permease%2C YjgP/YjgQ family	identified by match to protein family HMM PF03739	gene	gene1661	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1667
BFO_1668	BFO_1668		BFO_1668	1777970	1778353	-	hypothetical protein		gene	gene1663	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1668
BFO_1669	BFO_1669		BFO_1669	1777854	1777973	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1662	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1669
BFO_1670	BFO_1670		BFO_1670	1778624	1779076	+	hypothetical protein	identified by match to protein family HMM PF02576	gene	gene1664	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1670
BFO_1671	BFO_1671	nusA	nusA	1779112	1780470	+	transcription termination factor NusA	identified by match to protein family HMM PF08529%3B match to protein family HMM TIGR01953	gene	gene1665	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1671
BFO_1672	BFO_1672	infB	infB	1780499	1783456	+	translation initiation factor IF-2	identified by match to protein family HMM PF00009%3B match to protein family HMM PF01926%3B match to protein family HMM PF03144%3B match to protein family HMM PF04760%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00487	gene	gene1666	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1672
BFO_1673	BFO_1673		BFO_1673	1783469	1783966	+	CvpA family protein	identified by match to protein family HMM PF02674	gene	gene1667	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1673
BFO_1674	BFO_1674	sufB	sufB	1783968	1785425	+	FeS assembly protein SufB	identified by match to protein family HMM PF01458%3B match to protein family HMM TIGR01980	gene	gene1668	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1674
BFO_1675	BFO_1675	sufC	sufC	1785518	1786276	+	FeS assembly ATPase SufC	identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR01978	gene	gene1669	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1675
BFO_1676	BFO_1676	sufD	sufD	1786286	1787662	+	FeS assembly protein SufD	identified by match to protein family HMM PF01458%3B match to protein family HMM TIGR01981	gene	gene1670	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1676
BFO_1677	BFO_1677		BFO_1677	1787760	1788233	+	hypothetical protein		gene	gene1671	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1677
BFO_1678	BFO_1678		BFO_1678	1788240	1789169	-	putative membrane protein	identified by match to protein family HMM PF01594	gene	gene1672	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1678
BFO_1679	BFO_1679		BFO_1679	1789180	1790091	-	prephenate dehydrogenase	identified by match to protein family HMM PF02153	gene	gene1673	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1679
BFO_1680	BFO_1680		BFO_1680	1790104	1791174	-	putative 3-deoxy-7-phosphoheptulonate synthase	identified by match to protein family HMM PF00793%3B match to protein family HMM PF01817	gene	gene1674	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1680
BFO_1681	BFO_1681		BFO_1681	1791209	1792387	-	putative LL-diaminopimelate aminotransferase	identified by match to protein family HMM PF00155	gene	gene1675	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1681
BFO_1682	BFO_1682		BFO_1682	1792392	1793234	-	prephenate dehydratase	identified by match to protein family HMM PF00800	gene	gene1676	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1682
BFO_1683	BFO_1683		BFO_1683	1793526	1794308	-	oxidoreductase%2C short chain dehydrogenase/reductase family protein	identified by match to protein family HMM PF00106%3B match to protein family HMM PF08659	gene	gene1678	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1683
BFO_1684	BFO_1684		BFO_1684	1793444	1793563	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1677	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1684
BFO_1685	BFO_1685		BFO_1685	1794452	1794886	-	Hsp20/alpha crystallin family protein	identified by match to protein family HMM PF00011	gene	gene1679	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1685
BFO_1686	BFO_1686		BFO_1686	1795264	1795470	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1680	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1686
BFO_1687	BFO_1687		BFO_1687	1795632	1796834	+	cysteine desulfurase%2C SufS family	identified by match to protein family HMM PF00155%3B match to protein family HMM PF00266%3B match to protein family HMM PF01212%3B match to protein family HMM TIGR01979	gene	gene1681	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1687
BFO_1688	BFO_1688		BFO_1688	1796951	1798648	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1682	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1688
BFO_1689	BFO_1689		BFO_1689	1798714	1798836	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1683	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1689
BFO_1690	BFO_1690		BFO_1690	1798844	1799017	+	hypothetical protein	identified by match to protein family HMM PF01906	gene	gene1684	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1690
BFO_1691	BFO_1691	rnhB	rnhB	1799019	1799621	+	ribonuclease HII	identified by match to protein family HMM PF01351	gene	gene1685	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1691
BFO_1692	BFO_1692		BFO_1692	1799624	1800061	-	Fe-S metabolism associated domain protein	identified by match to protein family HMM PF02657	gene	gene1686	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1692
BFO_1693	BFO_1693		BFO_1693	1800065	1801066	-	peptidase%2C M28 family	identified by match to protein family HMM PF04389	gene	gene1687	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1693
BFO_1694	BFO_1694		BFO_1694	1801079	1802860	-	renal dipeptidase family protein	identified by match to protein family HMM PF00117%3B match to protein family HMM PF01244%3B match to protein family HMM PF07722	gene	gene1688	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1694
BFO_1695	BFO_1695	gyrB	gyrB	1802938	1804896	-	DNA gyrase%2C B subunit	identified by match to protein family HMM PF00204%3B match to protein family HMM PF00986%3B match to protein family HMM PF01751%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR01059	gene	gene1689	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1695
BFO_1696	BFO_1696		BFO_1696	1804971	1805105	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1690	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1696
BFO_1697	BFO_1697		BFO_1697	1805126	1807312	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664%3B match to protein family HMM PF03412	gene	gene1691	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1697
BFO_1698	BFO_1698		BFO_1698	1807317	1808702	-	hypothetical protein		gene	gene1692	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1698
BFO_1699	BFO_1699		BFO_1699	1808692	1809366	-	hypothetical protein		gene	gene1693	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1699
BFO_1700	BFO_1700		BFO_1700	1809356	1810438	-	glycosyltransferase%2C group 1 family protein	identified by match to protein family HMM PF00534	gene	gene1694	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1700
BFO_1701	BFO_1701		BFO_1701	1810437	1810565	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1695	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1701
BFO_1702	BFO_1702		BFO_1702	1810613	1811347	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1696	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1702
BFO_1703	BFO_1703		BFO_1703	1811893	1812240	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1697	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1703
BFO_1704	BFO_1704		BFO_1704	1812248	1812772	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1698	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1704
BFO_1705	BFO_1705		BFO_1705	1812769	1814985	-	glycosyltransferase%2C group 1 family protein	identified by match to protein family HMM PF00534	gene	gene1699	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1705
BFO_1706	BFO_1706		BFO_1706	1815098	1815403	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1700	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1706
BFO_1707	BFO_1707		BFO_1707	1815893	1817638	-	hypothetical protein		gene	gene1701	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1707
BFO_1708	BFO_1708		BFO_1708	1817798	1818367	-	hypothetical protein		gene	gene1702	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1708
BFO_1709	BFO_1709		BFO_1709	1818364	1819563	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1703	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1709
BFO_1710	BFO_1710		BFO_1710	1819566	1820108	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1704	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1710
BFO_1711	BFO_1711		BFO_1711	1820317	1820391	-	tRNA-Glu		tRNA	gene1705	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1711
BFO_1712	BFO_1712	rpsT	rpsT	1820463	1820717	-	30S ribosomal protein S20		gene	gene1706	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1712
BFO_1713	BFO_1713		BFO_1713	1820757	1820828	-	tRNA-Glu		tRNA	gene1707	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1713
BFO_1714	BFO_1714		BFO_1714	1820970	1822148	+	sigma factor regulatory protein%2C FecR/PupR family	identified by match to protein family HMM PF04773	gene	gene1708	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1714
BFO_1715	BFO_1715		BFO_1715	1822233	1825475	+	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene1709	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1715
BFO_1716	BFO_1716		BFO_1716	1825538	1826002	+		conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1710	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1716
BFO_1717	BFO_1717		BFO_1717	1826050	1827234	+		SusD family protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF07980	pseudogene	gene1711	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1717
BFO_1718	BFO_1718		BFO_1718	1827385	1830957	+	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene1712	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1718
BFO_1719	BFO_1719		BFO_1719	1831041	1832480	+	SusD family protein	identified by match to protein family HMM PF07980	gene	gene1713	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1719
BFO_1720	BFO_1720		BFO_1720	1832504	1833646	+	antioxidant%2C AhpC/TSA family	identified by match to protein family HMM PF00085%3B match to protein family HMM PF00578%3B match to protein family HMM PF08534	gene	gene1714	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1720
BFO_1721	BFO_1721		BFO_1721	1833970	1834383	-	transcriptional regulator%2C Fur family	identified by match to protein family HMM PF01475	gene	gene1715	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1721
BFO_1722	BFO_1722	trxA_1	trxA_1	1834541	1834855	-	thioredoxin	identified by match to protein family HMM PF00085%3B match to protein family HMM TIGR01068	gene	gene1716	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1722
BFO_1723	BFO_1723		BFO_1723	1834885	1838670	-	putative DNA polymerase III subunit alpha	identified by match to protein family HMM PF01336%3B match to protein family HMM PF02811%3B match to protein family HMM PF07733%3B match to protein family HMM TIGR00594	gene	gene1717	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1723
BFO_1724	BFO_1724		BFO_1724	1838818	1839438	+	hypothetical protein		gene	gene1718	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1724
BFO_1725	BFO_1725		BFO_1725	1839531	1840628	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1719	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1725
BFO_1726	BFO_1726		BFO_1726	1840694	1841158	+	putative methylglyoxal synthase	identified by match to protein family HMM PF02142	gene	gene1720	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1726
BFO_1727	BFO_1727		BFO_1727	1841171	1842001	-	tetratricopeptide repeat protein	identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719	gene	gene1721	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1727
BFO_1728	BFO_1728	rpsP	rpsP	1842080	1842784	+	ribosomal protein S16	identified by match to protein family HMM PF00886%3B match to protein family HMM TIGR00002	gene	gene1722	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1728
BFO_1729	BFO_1729	trxA_2	trxA_2	1842900	1843355	-	thioredoxin	identified by match to protein family HMM PF00085%3B match to protein family HMM TIGR01068	gene	gene1723	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1729
BFO_1730	BFO_1730		BFO_1730	1843386	1843514	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1724	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1730
BFO_1731	BFO_1731		BFO_1731	1844656	1846569	-	ATP-dependent DNA helicase%2C RecQ family	identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM TIGR00614	gene	gene1726	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1731
BFO_1732	BFO_1732		BFO_1732	1843491	1844672	+	hypothetical protein		gene	gene1725	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1732
BFO_1733	BFO_1733	recJ	recJ	1846576	1848300	-	single-stranded-DNA-specific exonuclease RecJ	identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272%3B match to protein family HMM TIGR00644	gene	gene1727	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1733
BFO_1734	BFO_1734		BFO_1734	1848373	1848567	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1728	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1734
BFO_1735	BFO_1735		BFO_1735	1848531	1849019	-	hypothetical protein	identified by match to protein family HMM PF04306	gene	gene1729	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1735
BFO_1736	BFO_1736	fmt	fmt	1849071	1850048	-	methionyl-tRNA formyltransferase	identified by match to protein family HMM PF00551%3B match to protein family HMM PF02911%3B match to protein family HMM TIGR00460	gene	gene1730	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1736
BFO_1737	BFO_1737		BFO_1737	1850445	1850567	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1731	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1737
BFO_1738	BFO_1738		BFO_1738	1850525	1850647	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1732	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1738
BFO_1739	BFO_1739		BFO_1739	1851053	1853113	-	Hsp90 protein	identified by match to protein family HMM PF00183%3B match to protein family HMM PF02518	gene	gene1733	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1739
BFO_1740	BFO_1740	clpC	clpC	1853233	1855797	-	negative regulator of genetic competence ClpC/MecB	identified by match to protein family HMM PF00004%3B match to protein family HMM PF02151%3B match to protein family HMM PF02861%3B match to protein family HMM PF07724%3B match to protein family HMM PF07728	gene	gene1734	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1740
BFO_1741	BFO_1741		BFO_1741	1855944	1857215	-	hypothetical protein	identified by match to protein family HMM PF00571%3B match to protein family HMM PF01595%3B match to protein family HMM PF03471	gene	gene1735	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1741
BFO_1742	BFO_1742		BFO_1742	1857206	1858414	-	L-serine ammonia-lyase	identified by match to protein family HMM PF03313%3B match to protein family HMM TIGR00720	gene	gene1736	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1742
BFO_1743	BFO_1743	pheS	pheS	1858493	1859515	+	phenylalanine--tRNA ligase%2C alpha subunit	identified by match to protein family HMM PF01409%3B match to protein family HMM TIGR00468	gene	gene1737	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1743
BFO_1744	BFO_1744	nth	nth	1859558	1860211	+	endonuclease III	identified by match to protein family HMM PF00633%3B match to protein family HMM PF00730%3B match to protein family HMM TIGR01083	gene	gene1738	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1744
BFO_1745	BFO_1745		BFO_1745	1860320	1863148	+	peptidase M16 inactive domain protein	identified by match to protein family HMM PF00675%3B match to protein family HMM PF05193	gene	gene1739	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1745
BFO_1746	BFO_1746		BFO_1746	1863319	1863507	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1740	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1746
BFO_1747	BFO_1747		BFO_1747	1863562	1863753	+	hypothetical protein		gene	gene1741	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1747
BFO_1748	BFO_1748		BFO_1748	1863750	1864745	+	hypothetical protein		gene	gene1742	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1748
BFO_1749	BFO_1749		BFO_1749	1865169	1866170	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1743	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1749
BFO_1750	BFO_1750		BFO_1750	1866342	1867550	-	ROK family protein	identified by match to protein family HMM PF00480	gene	gene1744	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1750
BFO_1751	BFO_1751		BFO_1751	1867585	1867698	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1745	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1751
BFO_1752	BFO_1752		BFO_1752	1867793	1868158	-	transcriptional regulator%2C MarR family	identified by match to protein family HMM PF01047	gene	gene1746	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1752
BFO_1753	BFO_1753	trxA_3	trxA_3	1868164	1868622	-	thioredoxin	identified by match to protein family HMM PF00085%3B match to protein family HMM TIGR01068	gene	gene1747	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1753
BFO_1754	BFO_1754		BFO_1754	1868631	1868831	-	hypothetical protein		gene	gene1748	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1754
BFO_1755	BFO_1755		BFO_1755	1868847	1871291	-	pyridine nucleotide-disulfide oxidoreductase	identified by match to protein family HMM PF00070%3B match to protein family HMM PF00581%3B match to protein family HMM PF01206%3B match to protein family HMM PF02852%3B match to protein family HMM PF07992	gene	gene1749	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1755
BFO_1756	BFO_1756		BFO_1756	1871552	1872415	+	hypothetical protein		gene	gene1750	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1756
BFO_1757	BFO_1757		BFO_1757	1872412	1874160	+	peptidase%2C S8/S53 family	identified by match to protein family HMM PF00082	gene	gene1751	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1757
BFO_1758	BFO_1758		BFO_1758	1874222	1874356	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1752	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1758
BFO_1759	BFO_1759	aroK	aroK	1874396	1874932	+	shikimate kinase	identified by match to protein family HMM PF01202	gene	gene1753	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1759
BFO_1760	BFO_1760		BFO_1760	1874992	1876851	+	2-oxoacid:acceptor oxidoreductase%2C alpha subunit	identified by match to protein family HMM PF01855%3B match to protein family HMM TIGR03710	gene	gene1754	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1760
BFO_1761	BFO_1761		BFO_1761	1876856	1877869	+	thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain protein	identified by match to protein family HMM PF02775	gene	gene1755	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1761
BFO_1762	BFO_1762		BFO_1762	1878182	1879060	+	efflux ABC transporter%2C permease protein	identified by match to protein family HMM PF02687	gene	gene1756	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1762
BFO_1763	BFO_1763		BFO_1763	1879085	1879339	+	hypothetical protein		gene	gene1757	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1763
BFO_1764	BFO_1764		BFO_1764	1879336	1880148	+	putative undecaprenyl-diphosphatase UppP	identified by match to protein family HMM PF02673	gene	gene1758	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1764
BFO_1765	BFO_1765	truB	truB	1880160	1880879	+	tRNA pseudouridine synthase B	identified by match to protein family HMM PF01509%3B match to protein family HMM TIGR00431	gene	gene1759	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1765
BFO_1766	BFO_1766	queA	queA	1880894	1881943	+	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	identified by match to protein family HMM PF02547%3B match to protein family HMM TIGR00113	gene	gene1760	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1766
BFO_1767	BFO_1767	folK	folK	1881940	1882419	+	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase	identified by match to protein family HMM PF01288%3B match to protein family HMM TIGR01498	gene	gene1761	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1767
BFO_1768	BFO_1768		BFO_1768	1882442	1884055	-	hypothetical protein	identified by match to protein family HMM TIGR02231	gene	gene1762	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1768
BFO_1769	BFO_1769		BFO_1769	1884597	1886948	-	TonB-dependent receptor	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715	gene	gene1764	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1769
BFO_1770	BFO_1770		BFO_1770	1884372	1884602	+	hypothetical protein		gene	gene1763	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1770
BFO_1771	BFO_1771		BFO_1771	1887198	1887383	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1765	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1771
BFO_1772	BFO_1772		BFO_1772	1887382	1888632	+	transporter%2C major facilitator family protein	identified by match to protein family HMM PF07690	gene	gene1766	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1772
BFO_1773	BFO_1773		BFO_1773	1888837	1889226	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1767	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1773
BFO_1774	BFO_1774		BFO_1774	1889295	1890056	+	hypothetical protein		gene	gene1768	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1774
BFO_1775	BFO_1775		BFO_1775	1890057	1890719	-	hypothetical protein		gene	gene1769	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1775
BFO_1776	BFO_1776		BFO_1776	1890685	1890819	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1770	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1776
BFO_1777	BFO_1777		BFO_1777	1890816	1891997	+	putative cystathionine beta-lyase PatB	identified by match to protein family HMM PF00155	gene	gene1771	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1777
BFO_1778	BFO_1778		BFO_1778	1892054	1892617	+	Sigma-70 region 2	identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937	gene	gene1772	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1778
BFO_1779	BFO_1779		BFO_1779	1892628	1893002	+	hypothetical protein		gene	gene1773	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1779
BFO_1780	BFO_1780	rpsA	rpsA	1893153	1894958	+	30S ribosomal protein S1	identified by match to protein family HMM PF00575	gene	gene1774	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1780
BFO_1781	BFO_1781		BFO_1781	1895077	1895211	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1775	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1781
BFO_1782	BFO_1782		BFO_1782	1895208	1896065	+	hypothetical protein		gene	gene1776	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1782
BFO_1783	BFO_1783	hcp	hcp	1896171	1897817	-	hydroxylamine reductase	identified by match to protein family HMM PF03063%3B match to protein family HMM TIGR01703	gene	gene1777	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1783
BFO_1784	BFO_1784		BFO_1784	1897918	1898064	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1778	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1784
BFO_1785	BFO_1785	typA	typA	1898072	1899880	-	GTP-binding protein TypA	identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR01394	gene	gene1779	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1785
BFO_1786	BFO_1786	rpsO	rpsO	1900030	1900299	+	ribosomal protein S15	identified by match to protein family HMM PF00312%3B match to protein family HMM TIGR00952	gene	gene1780	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1786
BFO_1787	BFO_1787		BFO_1787	1900435	1902525	-	KamA family protein		gene	gene1781	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1787
BFO_1788	BFO_1788		BFO_1788	1902601	1902729	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1782	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1788
BFO_1789	BFO_1789		BFO_1789	1902715	1903362	+	cyclic nucleotide-binding domain protein	identified by match to protein family HMM PF00027	gene	gene1783	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1789
BFO_1790	BFO_1790		BFO_1790	1903460	1903600	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1784	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1790
BFO_1791	BFO_1791		BFO_1791	1904043	1905197	-	putative cytochrome d ubiquinol oxidase%2C subunit II	identified by match to protein family HMM PF02322	gene	gene1785	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1791
BFO_1792	BFO_1792	cydA	cydA	1905224	1906774	-	cytochrome D ubiquinol oxidase%2C subunit I	identified by match to protein family HMM PF01654	gene	gene1786	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1792
BFO_1793	BFO_1793		BFO_1793	1906797	1906919	-	hypothetical protein		gene	gene1787	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1793
BFO_1794	BFO_1794		BFO_1794	1907162	1907752	+	RNA polymerase sigma-70 factor	identified by match to protein family HMM PF00196%3B match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937%3B match to protein family HMM TIGR02985	gene	gene1788	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1794
BFO_1795	BFO_1795		BFO_1795	1907922	1909046	+	sigma factor regulatory protein%2C FecR/PupR family	identified by match to protein family HMM PF04773	gene	gene1789	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1795
BFO_1796	BFO_1796		BFO_1796	1909071	1912601	+	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07660%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene1790	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1796
BFO_1797	BFO_1797		BFO_1797	1912691	1914514	+	SusD family protein	identified by match to protein family HMM PF07980	gene	gene1791	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1797
BFO_1798	BFO_1798		BFO_1798	1914686	1916167	+	Tat pathway signal sequence domain protein	identified by match to protein family HMM PF01408%3B match to protein family HMM TIGR01409	gene	gene1792	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1798
BFO_1799	BFO_1799		BFO_1799	1916271	1917149	+	putative lipoprotein	identified by match to protein family HMM PF06439	gene	gene1793	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1799
BFO_1800	BFO_1800		BFO_1800	1917249	1917998	-	hypothetical protein		gene	gene1794	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1800
BFO_1801	BFO_1801		BFO_1801	1918028	1919365	+	peptidase M16 inactive domain protein	identified by match to protein family HMM PF00675%3B match to protein family HMM PF05193	gene	gene1795	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1801
BFO_1802	BFO_1802		BFO_1802	1919411	1921204	-	chloride transporter%2C ClC family	identified by match to protein family HMM PF00571%3B match to protein family HMM PF00654	gene	gene1796	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1802
BFO_1803	BFO_1803		BFO_1803	1921206	1922606	-	exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase	identified by match to protein family HMM PF02397%3B match to protein family HMM TIGR03025	gene	gene1797	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1803
BFO_1804	BFO_1804		BFO_1804	1922606	1923190	-	Sua5/YciO/YrdC/YwlC family protein	identified by match to protein family HMM PF01300%3B match to protein family HMM TIGR00057	gene	gene1798	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1804
BFO_1805	BFO_1805		BFO_1805	1923168	1923284	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1799	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1805
BFO_1806	BFO_1806		BFO_1806	1923357	1924595	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1800	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1806
BFO_1807	BFO_1807	nagB	nagB	1924666	1925478	-	glucosamine-6-phosphate deaminase	identified by match to protein family HMM PF01182%3B match to protein family HMM TIGR00502	gene	gene1801	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1807
BFO_1808	BFO_1808		BFO_1808	1925500	1926045	-	putative lipoprotein		gene	gene1802	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1808
BFO_1809	BFO_1809		BFO_1809	1926059	1927237	-	metallo-beta-lactamase domain protein	identified by match to protein family HMM PF00258%3B match to protein family HMM PF00753	gene	gene1803	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1809
BFO_1810	BFO_1810	lgt_2	lgt_2	1927267	1928121	-	prolipoprotein diacylglyceryl transferase	identified by match to protein family HMM PF01790%3B match to protein family HMM TIGR00544	gene	gene1804	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1810
BFO_1811	BFO_1811		BFO_1811	1928203	1929099	-	diaminopimelate dehydrogenase	identified by match to protein family HMM PF01118%3B match to protein family HMM PF01408%3B match to protein family HMM PF02629%3B match to protein family HMM TIGR01921	gene	gene1805	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1811
BFO_1812	BFO_1812		BFO_1812	1930513	1931646	-	putative acetylornithine transaminase	identified by match to protein family HMM PF00202	gene	gene1806	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1812
BFO_1813	BFO_1813	argC	argC	1931679	1932653	-	N-acetyl-gamma-glutamyl-phosphate reductase	identified by match to protein family HMM PF01118%3B match to protein family HMM PF02774%3B match to protein family HMM TIGR01850	gene	gene1807	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1813
BFO_1814	BFO_1814		BFO_1814	1932650	1933897	-	putative argininosuccinate synthase	identified by match to protein family HMM PF00764%3B match to protein family HMM PF06508	gene	gene1808	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1814
BFO_1815	BFO_1815		BFO_1815	1933920	1934570	-	hypothetical protein		gene	gene1809	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1815
BFO_1816	BFO_1816	argR	argR	1934567	1935076	-	arginine repressor	identified by match to protein family HMM PF01316%3B match to protein family HMM PF02863%3B match to protein family HMM TIGR01529	gene	gene1810	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1816
BFO_1817	BFO_1817		BFO_1817	1935009	1935128	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1811	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1817
BFO_1818	BFO_1818		BFO_1818	1935229	1937037	+	tetratricopeptide repeat protein	identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719	gene	gene1812	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1818
BFO_1819	BFO_1819	nupG	nupG	1937475	1938779	-	nucleoside permease NupG	identified by match to protein family HMM PF03825	gene	gene1813	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1819
BFO_1820	BFO_1820		BFO_1820	1938832	1938948	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1814	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1820
BFO_1821	BFO_1821		BFO_1821	1939164	1940366	-	transposase%2C IS116/IS110/IS902 family	identified by match to protein family HMM PF02371	gene	gene1815	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1821
BFO_1822	BFO_1822		BFO_1822	1940328	1940588	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1816	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1822
BFO_1823	BFO_1823		BFO_1823	1940593	1941870	+	radical SAM domain protein	identified by match to protein family HMM PF04055	gene	gene1817	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1823
BFO_1824	BFO_1824		BFO_1824	1941944	1942342	+	hypothetical protein		gene	gene1818	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1824
BFO_1825	BFO_1825		BFO_1825	1942339	1943361	+	hypothetical protein		gene	gene1819	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1825
BFO_1826	BFO_1826		BFO_1826	1943358	1944119	+	putative ABC transporter%2C ATP-binding protein SagG	identified by match to protein family HMM PF00005	gene	gene1820	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1826
BFO_1827	BFO_1827		BFO_1827	1944094	1945371	+	ABC-2 type transporter	identified by match to protein family HMM PF01061	gene	gene1821	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1827
BFO_1828	BFO_1828		BFO_1828	1945437	1946639	+	transporter%2C dicarboxylate/amino acid:cation Na+/H+ symporter family protein	identified by match to protein family HMM PF00375	gene	gene1822	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1828
BFO_1829	BFO_1829	lpxB	lpxB	1946747	1947880	-	lipid-A-disaccharide synthase	identified by match to protein family HMM PF02684%3B match to protein family HMM TIGR00215	gene	gene1823	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1829
BFO_1830	BFO_1830	surE	surE	1947887	1948657	-	5'/3'-nucleotidase SurE	identified by match to protein family HMM PF01975%3B match to protein family HMM TIGR00087	gene	gene1824	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1830
BFO_1831	BFO_1831		BFO_1831	1950168	1950725	-	RNA methyltransferase%2C RsmD family	identified by match to protein family HMM PF03602%3B match to protein family HMM TIGR00095	gene	gene1826	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1831
BFO_1832	BFO_1832		BFO_1832	1948763	1950196	+	putative cardiolipin synthetase	identified by match to protein family HMM PF00614	gene	gene1825	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1832
BFO_1833	BFO_1833		BFO_1833	1950713	1951471	-	hypothetical protein		gene	gene1827	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1833
BFO_1834	BFO_1834		BFO_1834	1951532	1952218	-	hypothetical protein		gene	gene1828	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1834
BFO_1835	BFO_1835		BFO_1835	1952311	1953735	+	hypothetical protein		gene	gene1829	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1835
BFO_1836	BFO_1836		BFO_1836	1953867	1953989	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1830	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1836
BFO_1837	BFO_1837		BFO_1837	1954218	1954856	+	hypothetical protein		gene	gene1831	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1837
BFO_1838	BFO_1838		BFO_1838	1954871	1955572	+	S-adenosylmethionine-dependent methyltransferase%2C YraL family	identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR00096	gene	gene1832	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1838
BFO_1839	BFO_1839		BFO_1839	1955591	1956460	+	putative lipoprotein		gene	gene1833	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1839
BFO_1840	BFO_1840		BFO_1840	1956457	1957155	+	HAD hydrolase%2C TIGR02254 family	identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01549%3B match to protein family HMM TIGR02254	gene	gene1834	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1840
BFO_1841	BFO_1841		BFO_1841	1957191	1957457	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1835	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1841
BFO_1842	BFO_1842		BFO_1842	1957518	1957646	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1836	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1842
BFO_1843	BFO_1843	cobD	cobD	1959142	1960086	-	cobalamin biosynthesis protein CobD	identified by match to protein family HMM PF03186%3B match to protein family HMM TIGR00380	gene	gene1838	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1843
BFO_1844	BFO_1844	cobQ	cobQ	1957673	1959169	+	cobyric acid synthase CobQ	identified by match to protein family HMM PF01656%3B match to protein family HMM PF07685%3B match to protein family HMM TIGR00313	gene	gene1837	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1844
BFO_1845	BFO_1845		BFO_1845	1960062	1961084	-	putative threonine-phosphate decarboxylase	identified by match to protein family HMM PF00155	gene	gene1839	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1845
BFO_1846	BFO_1846		BFO_1846	1961194	1961571	+	putative endoribonuclease L-PSP	identified by match to protein family HMM PF01042%3B match to protein family HMM TIGR00004	gene	gene1840	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1846
BFO_1847	BFO_1847		BFO_1847	1961770	1962921	+	hypothetical protein		gene	gene1841	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1847
BFO_1848	BFO_1848	ispF	ispF	1962949	1963425	+	2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase	identified by match to protein family HMM PF02542%3B match to protein family HMM TIGR00151	gene	gene1842	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1848
BFO_1849	BFO_1849		BFO_1849	1963431	1964708	-	recombination factor protein RarA	identified by match to protein family HMM PF00004	gene	gene1843	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1849
BFO_1850	BFO_1850		BFO_1850	1964895	1965722	+	hypothetical protein		gene	gene1844	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1850
BFO_1851	BFO_1851		BFO_1851	1965859	1967079	+	hypothetical protein		gene	gene1845	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1851
BFO_1852	BFO_1852		BFO_1852	1967127	1967270	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1846	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1852
BFO_1853	BFO_1853		BFO_1853	1967689	1973733	+	RHS repeat-associated core domain protein	identified by match to protein family HMM PF05593%3B match to protein family HMM TIGR01643%3B match to protein family HMM TIGR03696	gene	gene1847	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1853
BFO_1854	BFO_1854		BFO_1854	1974025	1974147	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1848	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1854
BFO_1855	BFO_1855		BFO_1855	1974162	1974380	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1849	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1855
BFO_1856	BFO_1856		BFO_1856	1974527	1976461	+	RHS repeat-associated core domain protein	identified by match to protein family HMM TIGR03696	gene	gene1850	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1856
BFO_1857	BFO_1857		BFO_1857	1976463	1977272	+	hypothetical protein		gene	gene1851	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1857
BFO_1858	BFO_1858		BFO_1858	1977357	1979243	+	RHS repeat-associated core domain protein	identified by match to protein family HMM TIGR03696	gene	gene1852	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1858
BFO_1859	BFO_1859		BFO_1859	1979289	1979900	+	hypothetical protein		gene	gene1853	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1859
BFO_1860	BFO_1860		BFO_1860	1979961	1981412	+	RHS repeat-associated core domain protein	identified by match to protein family HMM TIGR03696	gene	gene1854	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1860
BFO_1861	BFO_1861		BFO_1861	1981417	1981887	+	hypothetical protein		gene	gene1855	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1861
BFO_1862	BFO_1862		BFO_1862	1981875	1983779	+	RHS repeat-associated core domain protein	identified by match to protein family HMM TIGR03696	gene	gene1856	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1862
BFO_1863	BFO_1863		BFO_1863	1983779	1984528	+	hypothetical protein		gene	gene1857	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1863
BFO_1864	BFO_1864		BFO_1864	1984537	1984872	+		hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene1858	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1864
BFO_1865	BFO_1865		BFO_1865	1985085	1985414	+	hypothetical protein		gene	gene1859	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1865
BFO_1866	BFO_1866		BFO_1866	1985460	1985579	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1860	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1866
BFO_1867	BFO_1867		BFO_1867	1985545	1986354	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1861	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1867
BFO_1868	BFO_1868		BFO_1868	1986725	1986847	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1862	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1868
BFO_1869	BFO_1869		BFO_1869	1987085	1987666	+	hypothetical protein		gene	gene1863	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1869
BFO_1870	BFO_1870		BFO_1870	1987697	1987924	+	hypothetical protein		gene	gene1864	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1870
BFO_1871	BFO_1871		BFO_1871	1987924	1988364	+	cytidine and deoxycytidylate deaminase zinc-binding region	identified by match to protein family HMM PF00383	gene	gene1865	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1871
BFO_1872	BFO_1872		BFO_1872	1988375	1989985	-	hypothetical protein		gene	gene1866	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1872
BFO_1873	BFO_1873		BFO_1873	1990078	1990965	-	CAAX amino terminal protease family protein	identified by match to protein family HMM PF02517	gene	gene1867	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1873
BFO_1874	BFO_1874	trmD	trmD	1991028	1991705	-	tRNA (guanine-N(1)-)-methyltransferase	identified by match to protein family HMM PF01746%3B match to protein family HMM TIGR00088	gene	gene1868	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1874
BFO_1875	BFO_1875		BFO_1875	1991735	1991848	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1869	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1875
BFO_1876	BFO_1876	pheT	pheT	1991868	1994330	+	phenylalanine--tRNA ligase%2C beta subunit	identified by match to protein family HMM PF01588%3B match to protein family HMM PF03147%3B match to protein family HMM PF03483%3B match to protein family HMM PF03484%3B match to protein family HMM TIGR00472	gene	gene1870	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1876
BFO_1877	BFO_1877		BFO_1877	1994358	1995080	+	DNA-binding regulatory protein%2C YebC/PmpR family	identified by match to protein family HMM PF01709%3B match to protein family HMM TIGR01033	gene	gene1871	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1877
BFO_1878	BFO_1878		BFO_1878	1996196	1997101	+	hypothetical protein		gene	gene1872	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1878
BFO_1879	BFO_1879		BFO_1879	1997107	1997829	+	peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type	identified by match to protein family HMM PF00160	gene	gene1873	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1879
BFO_1880	BFO_1880		BFO_1880	1998425	1999087	-	RNA methyltransferase%2C TrmH family	identified by match to protein family HMM PF00588	gene	gene1875	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1880
BFO_1881	BFO_1881		BFO_1881	1997834	1998448	+	putative lipoprotein		gene	gene1874	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1881
BFO_1882	BFO_1882	glmM	glmM	1999101	2000489	-	phosphoglucosamine mutase	identified by match to protein family HMM PF00408%3B match to protein family HMM PF02878%3B match to protein family HMM PF02879%3B match to protein family HMM PF02880%3B match to protein family HMM TIGR03990	gene	gene1876	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1882
BFO_1883	BFO_1883	rplU	rplU	2000772	2001089	+	ribosomal protein L21	identified by match to protein family HMM PF00829%3B match to protein family HMM TIGR00061	gene	gene1877	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1883
BFO_1884	BFO_1884	rpmA	rpmA	2001110	2001388	+	ribosomal protein L27	identified by match to protein family HMM PF01016%3B match to protein family HMM TIGR00062	gene	gene1878	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1884
BFO_1885	BFO_1885		BFO_1885	2001539	2002081	+	NlpC/P60 family protein	identified by match to protein family HMM PF00877	gene	gene1879	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1885
BFO_1886	BFO_1886	serS	serS	2002155	2003426	+	serine--tRNA ligase	identified by match to protein family HMM PF00587%3B match to protein family HMM PF02403%3B match to protein family HMM TIGR00414	gene	gene1880	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1886
BFO_1887	BFO_1887		BFO_1887	2003540	2004667	-	Ser/Thr phosphatase family protein	identified by match to protein family HMM PF00149	gene	gene1881	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1887
BFO_1888	BFO_1888		BFO_1888	2004774	2004908	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1882	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1888
BFO_1889	BFO_1889		BFO_1889	2005100	2006284	-	HTH domain protein	identified by match to protein family HMM PF02661%3B match to protein family HMM PF08279	gene	gene1883	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1889
BFO_1890	BFO_1890		BFO_1890	2007176	2008387	+	hypothetical protein		gene	gene1884	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1890
BFO_1891	BFO_1891		BFO_1891	2008468	2008590	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1885	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1891
BFO_1892	BFO_1892		BFO_1892	2008762	2009796	+	putative vitamin B12 import system permease protein BtuC	identified by match to protein family HMM PF01032	gene	gene1886	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1892
BFO_1893	BFO_1893		BFO_1893	2009835	2010290	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1887	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1893
BFO_1894	BFO_1894		BFO_1894	2010269	2011042	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1888	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1894
BFO_1895	BFO_1895		BFO_1895	2011026	2013005	-	hypothetical protein		gene	gene1889	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1895
BFO_1896	BFO_1896		BFO_1896	2013139	2020587	-	hypothetical protein		gene	gene1890	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1896
BFO_1897	BFO_1897	ruvA	ruvA	2020587	2021177	-	Holliday junction DNA helicase RuvA	identified by match to protein family HMM PF01330%3B match to protein family HMM PF07499%3B match to protein family HMM TIGR00084	gene	gene1891	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1897
BFO_1898	BFO_1898		BFO_1898	2021198	2021347	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1892	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1898
BFO_1899	BFO_1899		BFO_1899	2021351	2021686	+	putative translation initiation factor SUI1	identified by match to protein family HMM PF01253	gene	gene1893	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1899
BFO_1900	BFO_1900		BFO_1900	2021680	2024904	+	UvrD/REP helicase	identified by match to protein family HMM PF00580	gene	gene1894	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1900
BFO_1901	BFO_1901	psd	psd	2024959	2025633	+	phosphatidylserine decarboxylase	identified by match to protein family HMM PF02666%3B match to protein family HMM TIGR00164	gene	gene1895	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1901
BFO_1902	BFO_1902		BFO_1902	2025638	2026381	+	putative CDP-diacylglycerol-serine O-phosphatidyltransferase	identified by match to protein family HMM PF01066	gene	gene1896	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1902
BFO_1903	BFO_1903		BFO_1903	2026473	2027378	+	transcriptional regulator%2C AraC family	identified by match to protein family HMM PF00165	gene	gene1897	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1903
BFO_1904	BFO_1904		BFO_1904	2028645	2029301	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1899	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1904
BFO_1905	BFO_1905	hflX	hflX	2027421	2028656	+	GTP-binding protein HflX	identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR03156	gene	gene1898	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1905
BFO_1906	BFO_1906		BFO_1906	2029282	2030697	-	putative lipoprotein		gene	gene1900	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1906
BFO_1907	BFO_1907		BFO_1907	2030684	2031814	-	hypothetical protein		gene	gene1901	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1907
BFO_1908	BFO_1908		BFO_1908	2032119	2032340	-	hypothetical protein		gene	gene1902	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1908
BFO_1909	BFO_1909		BFO_1909	2032410	2032544	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1903	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1909
BFO_1910	BFO_1910		BFO_1910	2033196	2034275	-	bacterial group 2 Ig-like protein	identified by match to protein family HMM PF02368	gene	gene1904	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1910
BFO_1911	BFO_1911		BFO_1911	2034333	2034875	-	LemA family protein	identified by match to protein family HMM PF04011	gene	gene1905	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1911
BFO_1912	BFO_1912		BFO_1912	2035029	2036858	-	hypothetical protein	overlaps another CDS with the same product name	gene	gene1906	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1912
BFO_1913	BFO_1913		BFO_1913	2036858	2037079	-	hypothetical protein	overlaps another CDS with the same product name	gene	gene1907	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1913
BFO_1914	BFO_1914		BFO_1914	2037215	2038654	-	5'-nucleotidase%2C C-terminal domain protein	identified by match to protein family HMM PF00149%3B match to protein family HMM PF02872	gene	gene1908	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1914
BFO_1915	BFO_1915		BFO_1915	2038677	2039867	-	hypothetical protein	identified by match to protein family HMM PF07787	gene	gene1909	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1915
BFO_1916	BFO_1916		BFO_1916	2040150	2040269	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1910	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1916
BFO_1917	BFO_1917		BFO_1917	2040664	2040777	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1911	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1917
BFO_1918	BFO_1918		BFO_1918	2041896	2044178	-	bacterial group 2 Ig-like protein	identified by match to protein family HMM PF02368	gene	gene1912	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1918
BFO_1919	BFO_1919		BFO_1919	2044443	2044583	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1913	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1919
BFO_1920	BFO_1920		BFO_1920	2044736	2044858	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1914	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1920
BFO_1921	BFO_1921		BFO_1921	2044942	2045100	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1915	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1921
BFO_1922	BFO_1922		BFO_1922	2045364	2048318	+	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00165%3B match to protein family HMM PF00512%3B match to protein family HMM PF00515%3B match to protein family HMM PF02518	gene	gene1916	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1922
BFO_1923	BFO_1923		BFO_1923	2048474	2050807	-	glycosyl hydrolase family 20%2C catalytic domain protein	identified by match to protein family HMM PF00728%3B match to protein family HMM PF02838%3B match to protein family HMM PF07691	gene	gene1917	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1923
BFO_1924	BFO_1924	glyA	glyA	2050844	2052124	-	glycine hydroxymethyltransferase	identified by match to protein family HMM PF00464	gene	gene1918	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1924
BFO_1925	BFO_1925		BFO_1925	2052537	2052608	-	tRNA-Arg		tRNA	gene1919	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1925
BFO_1926	BFO_1926	sodB	sodB	2052676	2053260	-	superoxide dismutase (Fe)	identified by match to protein family HMM PF00081%3B match to protein family HMM PF02777	gene	gene1920	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1926
BFO_1927	BFO_1927	recO	recO	2053408	2054136	-	DNA repair protein RecO	identified by match to protein family HMM PF02565%3B match to protein family HMM TIGR00613	gene	gene1921	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1927
BFO_1928	BFO_1928		BFO_1928	2054258	2055259	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1922	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1928
BFO_1929	BFO_1929		BFO_1929	2055387	2055500	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1923	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1929
BFO_1930	BFO_1930	gltX	gltX	2055463	2057052	+	glutamate--tRNA ligase	identified by match to protein family HMM PF00749%3B match to protein family HMM TIGR00464	gene	gene1924	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1930
BFO_1931	BFO_1931	waaA	waaA	2057052	2058284	+	3-deoxy-D-manno-octulosonic-acid transferase	identified by match to protein family HMM PF04413	gene	gene1925	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1931
BFO_1932	BFO_1932		BFO_1932	2058288	2059421	-	bacterial capsule synthesis protein	identified by match to protein family HMM PF09587	gene	gene1926	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1932
BFO_1933	BFO_1933		BFO_1933	2059421	2060155	-	bacterial transferase hexapeptide repeat protein	identified by match to protein family HMM PF00132	gene	gene1927	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1933
BFO_1934	BFO_1934	rpsU	rpsU	2060121	2060312	+	ribosomal protein S21	identified by match to protein family HMM PF01165%3B match to protein family HMM TIGR00030	gene	gene1928	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1934
BFO_1935	BFO_1935		BFO_1935	2060388	2061287	+	site-specific recombinase%2C phage integrase family	identified by match to protein family HMM PF00589	gene	gene1929	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1935
BFO_1936	BFO_1936	raiA	raiA	2061299	2061598	+	ribosomal subunit interface protein	identified by match to protein family HMM PF02482%3B match to protein family HMM TIGR00741	gene	gene1930	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1936
BFO_1937	BFO_1937		BFO_1937	2061691	2061767	+	tRNA-Thr		tRNA	gene1931	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1937
BFO_1938	BFO_1938		BFO_1938	2061884	2061955	+	tRNA-Thr		tRNA	gene1932	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1938
BFO_1939	BFO_1939	tuf	tuf	2062015	2063202	+	translation elongation factor Tu	identified by match to protein family HMM PF00009%3B match to protein family HMM PF03143%3B match to protein family HMM PF03144%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00485	gene	gene1933	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1939
BFO_1940	BFO_1940		BFO_1940	2063251	2063326	+	tRNA-Trp		tRNA	gene1934	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1940
BFO_1941	BFO_1941	secE	secE	2063340	2063528	+	preprotein translocase%2C SecE subunit	identified by match to protein family HMM PF00584%3B match to protein family HMM TIGR00964	gene	gene1935	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1941
BFO_1942	BFO_1942	nusG	nusG	2063540	2064082	+	transcription termination/antitermination factor NusG	identified by match to protein family HMM PF00467%3B match to protein family HMM PF02357%3B match to protein family HMM TIGR00922	gene	gene1936	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1942
BFO_1943	BFO_1943		BFO_1943	2064144	2064590	+	Ribosomal protein L11%2C RNA binding domain protein	identified by match to protein family HMM PF00298	gene	gene1937	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1943
BFO_1944	BFO_1944	rplA	rplA	2064605	2065300	+	ribosomal protein L1	identified by match to protein family HMM PF00687%3B match to protein family HMM TIGR01169	gene	gene1938	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1944
BFO_1945	BFO_1945	rplJ	rplJ	2065323	2065850	+	ribosomal protein L10	identified by match to protein family HMM PF00466	gene	gene1939	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1945
BFO_1946	BFO_1946	rplL	rplL	2065893	2066267	+	ribosomal protein L7/L12	identified by match to protein family HMM PF00542%3B match to protein family HMM TIGR00855	gene	gene1940	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1946
BFO_1947	BFO_1947	rpoB	rpoB	2066384	2070196	+	DNA-directed RNA polymerase%2C beta subunit	identified by match to protein family HMM PF00562%3B match to protein family HMM PF04560%3B match to protein family HMM PF04561%3B match to protein family HMM PF04563%3B match to protein family HMM PF04565%3B match to protein family HMM TIGR02013	gene	gene1941	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1947
BFO_1948	BFO_1948	rpoC	rpoC	2070225	2074502	+	DNA-directed RNA polymerase%2C beta' subunit	identified by match to protein family HMM PF00623%3B match to protein family HMM PF04983%3B match to protein family HMM PF04997%3B match to protein family HMM PF04998%3B match to protein family HMM PF05000%3B match to protein family HMM TIGR02386	gene	gene1942	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1948
BFO_1949	BFO_1949		BFO_1949	2074527	2076062	+	hypothetical protein	identified by match to protein family HMM PF05872	gene	gene1943	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1949
BFO_1950	BFO_1950		BFO_1950	2076257	2076373	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1944	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1950
BFO_1951	BFO_1951		BFO_1951	2076410	2077603	+	isochorismate synthase	identified by match to protein family HMM PF00425%3B match to protein family HMM TIGR00543	gene	gene1945	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1951
BFO_1952	BFO_1952	menD_1	menD_1	2077603	2079336	+	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase	identified by match to protein family HMM PF02776%3B match to protein family HMM TIGR00173	gene	gene1946	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1952
BFO_1953	BFO_1953	menB_1	menB_1	2079355	2080179	+	naphthoate synthase	identified by match to protein family HMM PF00378%3B match to protein family HMM TIGR01929	gene	gene1947	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1953
BFO_1954	BFO_1954		BFO_1954	2080176	2081249	+	putative o-succinylbenzoate synthase	identified by match to protein family HMM PF01188	gene	gene1948	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1954
BFO_1955	BFO_1955		BFO_1955	2081273	2082322	+	O-succinylbenzoic acid--CoA ligase		gene	gene1949	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1955
BFO_1956	BFO_1956		BFO_1956	2082346	2083686	-	transposase%2C IS4 family	identified by match to protein family HMM PF01609	gene	gene1950	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1956
BFO_1957	BFO_1957		BFO_1957	2084012	2084818	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1951	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1957
BFO_1958	BFO_1958		BFO_1958	2085260	2086486	+	site-specific recombinase%2C phage integrase family	identified by match to protein family HMM PF00589	gene	gene1952	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1958
BFO_1959	BFO_1959		BFO_1959	2086535	2089165	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1953	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1959
BFO_1960	BFO_1960		BFO_1960	2089193	2089312	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1954	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1960
BFO_1961	BFO_1961		BFO_1961	2089350	2092061	+	helicase C-terminal domain protein	identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF04313%3B match to protein family HMM PF04851	gene	gene1955	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1961
BFO_1962	BFO_1962		BFO_1962	2092065	2093486	+	N-6 DNA Methylase	identified by match to protein family HMM PF01170%3B match to protein family HMM PF02384	gene	gene1956	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1962
BFO_1963	BFO_1963		BFO_1963	2093492	2094652	+	hypothetical protein	identified by match to protein family HMM PF06250	gene	gene1957	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1963
BFO_1964	BFO_1964		BFO_1964	2094664	2096073	+	type I restriction modification DNA specificity domain protein	identified by match to protein family HMM PF01420	gene	gene1958	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1964
BFO_1965	BFO_1965		BFO_1965	2096433	2097236	-	site-specific recombinase%2C phage integrase family	identified by match to protein family HMM PF00589	gene	gene1959	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1965
BFO_1966	BFO_1966		BFO_1966	2097765	2098970	-	hypothetical protein		gene	gene1960	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1966
BFO_1967	BFO_1967		BFO_1967	2099333	2099662	+	hypothetical protein		gene	gene1961	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1967
BFO_1968	BFO_1968		BFO_1968	2099722	2100369	-	hypothetical protein		gene	gene1962	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1968
BFO_1969	BFO_1969		BFO_1969	2100995	2101177	+	hypothetical protein		gene	gene1963	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1969
BFO_1970	BFO_1970		BFO_1970	2101400	2101549	+	hypothetical protein		gene	gene1964	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1970
BFO_1971	BFO_1971		BFO_1971	2101752	2101970	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1965	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1971
BFO_1972	BFO_1972		BFO_1972	2101988	2102878	-		transposase%2C IS4 family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01609	pseudogene	gene1966	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1972
BFO_1973	BFO_1973		BFO_1973	2102995	2103840	+	hypothetical protein		gene	gene1967	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1973
BFO_1974	BFO_1974		BFO_1974	2103935	2104021	-	tRNA-Leu		tRNA	gene1968	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1974
BFO_1975	BFO_1975		BFO_1975	2104192	2105136	-	hypothetical protein		gene	gene1969	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1975
BFO_1976	BFO_1976		BFO_1976	2105168	2106001	-	apurinic endonuclease (APN1)	identified by match to protein family HMM PF01261%3B match to protein family HMM TIGR00587	gene	gene1970	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1976
BFO_1977	BFO_1977		BFO_1977	2106020	2107996	-	putative membrane protein		gene	gene1971	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1977
BFO_1978	BFO_1978		BFO_1978	2108002	2108745	-	glycosyltransferase%2C group 2 family protein	identified by match to protein family HMM PF00535	gene	gene1972	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1978
BFO_1979	BFO_1979		BFO_1979	2108714	2108881	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1973	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1979
BFO_1980	BFO_1980		BFO_1980	2108853	2113562	+	hypothetical protein		gene	gene1974	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1980
BFO_1981	BFO_1981		BFO_1981	2113555	2115864	+	outer membrane protein%2C OMP85 family	identified by match to protein family HMM PF01103	gene	gene1975	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1981
BFO_1982	BFO_1982		BFO_1982	2115953	2118448	-	alpha amylase%2C catalytic domain protein	identified by match to protein family HMM PF00128%3B match to protein family HMM PF02922	gene	gene1976	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1982
BFO_1983	BFO_1983		BFO_1983	2118462	2118584	+	hypothetical protein		gene	gene1977	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1983
BFO_1984	BFO_1984		BFO_1984	2118788	2119600	+	methyltransferase domain protein	identified by match to protein family HMM PF07021%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene1978	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1984
BFO_1985	BFO_1985		BFO_1985	2119597	2121027	+	putative membrane protein		gene	gene1979	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1985
BFO_1986	BFO_1986		BFO_1986	2120981	2122282	+		putative membrane protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1980	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1986
BFO_1987	BFO_1987		BFO_1987	2122227	2123087	+	glycosyltransferase%2C group 2 family protein		gene	gene1981	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1987
BFO_1988	BFO_1988		BFO_1988	2123057	2124346	+		glycosyltransferase%2C group 1 family protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00534	pseudogene	gene1982	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1988
BFO_1989	BFO_1989		BFO_1989	2126026	2127159	-	glycosyltransferase%2C group 1 family protein	identified by match to protein family HMM PF00534%3B match to protein family HMM PF09314	gene	gene1984	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1989
BFO_1990	BFO_1990		BFO_1990	2124694	2126031	+	glycosyltransferase%2C group 1 family protein	identified by match to protein family HMM PF00534	gene	gene1983	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1990
BFO_1991	BFO_1991		BFO_1991	2127176	2127649	-	putative rRNA large subunit m3Psi methyltransferase RlmH	identified by match to protein family HMM PF02590	gene	gene1985	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1991
BFO_1992	BFO_1992		BFO_1992	2127966	2128217	+	hypothetical protein		gene	gene1986	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1992
BFO_1993	BFO_1993	nadC	nadC	2128241	2129089	+	nicotinate-nucleotide diphosphorylase (carboxylating)	identified by match to protein family HMM PF01729%3B match to protein family HMM PF02749%3B match to protein family HMM TIGR00078	gene	gene1987	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1993
BFO_1994	BFO_1994		BFO_1994	2129114	2131807	+	hypothetical protein		gene	gene1988	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1994
BFO_1995	BFO_1995		BFO_1995	2131816	2132388	-	bacterial transferase hexapeptide repeat protein	identified by match to protein family HMM PF00132	gene	gene1989	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1995
BFO_1996	BFO_1996		BFO_1996	2132410	2133114	-	tetrapyrrole methylase	identified by match to protein family HMM PF00590	gene	gene1990	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1996
BFO_1997	BFO_1997		BFO_1997	2133382	2133549	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1991	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1997
BFO_1998	BFO_1998		BFO_1998	2133668	2133808	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1992	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1998
BFO_1999	BFO_1999		BFO_1999	2134209	2134364	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1993	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_1999
BFO_2000	BFO_2000		BFO_2000	2134585	2137812	-	bacterial group 2 Ig-like protein	identified by match to protein family HMM PF02368	gene	gene1994	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2000
BFO_2001	BFO_2001		BFO_2001	2138340	2138564	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1995	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2001
BFO_2002	BFO_2002		BFO_2002	2139265	2140389	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene1996	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2002
BFO_2003	BFO_2003		BFO_2003	2140587	2142746	+	HRDC domain protein	identified by match to protein family HMM PF00570	gene	gene1997	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2003
BFO_2004	BFO_2004		BFO_2004	2142914	2142986	+	tRNA-Lys		tRNA	gene1998	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2004
BFO_2005	BFO_2005		BFO_2005	2143181	2143300	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1999	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2005
BFO_2006	BFO_2006		BFO_2006	2143596	2147276	+	putative phosphoribosylformylglycinamidine synthase	identified by match to protein family HMM PF00586%3B match to protein family HMM PF02769	gene	gene2000	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2006
BFO_2007	BFO_2007		BFO_2007	2147582	2149117	+	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein	identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518	gene	gene2001	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2007
BFO_2008	BFO_2008	rprY	rprY	2149137	2149862	+	transcriptional regulatory protein RprY	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene2002	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2008
BFO_2009	BFO_2009		BFO_2009	2150030	2150680	-	hypothetical protein		gene	gene2003	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2009
BFO_2010	BFO_2010		BFO_2010	2150815	2151513	-	hypothetical protein	identified by match to protein family HMM PF01863	gene	gene2004	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2010
BFO_2011	BFO_2011		BFO_2011	2151870	2152409	+	RNA polymerase sigma factor%2C sigma-70 family	identified by match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937	gene	gene2005	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2011
BFO_2012	BFO_2012		BFO_2012	2152593	2153588	+	sigma factor regulatory protein%2C FecR/PupR family	identified by match to protein family HMM PF04773	gene	gene2006	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2012
BFO_2013	BFO_2013		BFO_2013	2153707	2157141	+	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene2007	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2013
BFO_2014	BFO_2014		BFO_2014	2157166	2158938	+	SusD family protein	identified by match to protein family HMM PF07980	gene	gene2008	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2014
BFO_2015	BFO_2015		BFO_2015	2158980	2160239	+	putative lipoprotein		gene	gene2009	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2015
BFO_2016	BFO_2016	sdh	sdh	2160397	2161161	-	serine 3-dehydrogenase	identified by match to protein family HMM PF00106%3B match to protein family HMM PF01370%3B match to protein family HMM PF08659	gene	gene2010	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2016
BFO_2017	BFO_2017		BFO_2017	2161523	2162386	+	hypothetical protein		gene	gene2011	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2017
BFO_2018	BFO_2018		BFO_2018	2162397	2162603	+	hypothetical protein		gene	gene2012	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2018
BFO_2019	BFO_2019		BFO_2019	2164938	2166284	-	NOL1/NOP2/sun family protein	identified by match to protein family HMM PF01189	gene	gene2014	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2019
BFO_2020	BFO_2020	ppk1	ppk1	2162902	2164941	+	polyphosphate kinase 1	identified by match to protein family HMM PF02503%3B match to protein family HMM TIGR03705	gene	gene2013	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2020
BFO_2021	BFO_2021		BFO_2021	2166333	2168156	-	arylsulfatase	identified by match to protein family HMM PF00884	gene	gene2015	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2021
BFO_2022	BFO_2022	slyD	slyD	2168214	2168894	+	peptidyl-prolyl cis-trans isomerase SlyD%2C FKBP-type		gene	gene2016	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2022
BFO_2023	BFO_2023		BFO_2023	2169978	2171411	-	peptidase%2C S41 family	identified by match to protein family HMM PF03572	gene	gene2018	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2023
BFO_2024	BFO_2024	aroC	aroC	2168913	2170001	+	chorismate synthase	identified by match to protein family HMM PF01264%3B match to protein family HMM TIGR00033	gene	gene2017	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2024
BFO_2025	BFO_2025		BFO_2025	2171546	2171788	-	hypothetical protein		gene	gene2019	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2025
BFO_2026	BFO_2026		BFO_2026	2171914	2172954	+	hypothetical protein		gene	gene2020	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2026
BFO_2027	BFO_2027		BFO_2027	2172997	2174316	-	putative RIP metalloprotease RseP	identified by match to protein family HMM PF02163	gene	gene2021	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2027
BFO_2028	BFO_2028		BFO_2028	2174297	2174410	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2022	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2028
BFO_2029	BFO_2029	dxr	dxr	2174416	2175570	-	1-deoxy-D-xylulose 5-phosphate reductoisomerase	identified by match to protein family HMM PF02670%3B match to protein family HMM PF08436%3B match to protein family HMM TIGR00243	gene	gene2023	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2029
BFO_2030	BFO_2030		BFO_2030	2175577	2176455	-	peptidase%2C M23 family	identified by match to protein family HMM PF01551	gene	gene2024	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2030
BFO_2031	BFO_2031	rimM	rimM	2176460	2176993	-	16S rRNA processing protein RimM	identified by match to protein family HMM TIGR02273	gene	gene2025	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2031
BFO_2032	BFO_2032		BFO_2032	2177029	2177178	-		hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene2026	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2032
BFO_2033	BFO_2033		BFO_2033	2177175	2177783	-	hypothetical protein		gene	gene2027	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2033
BFO_2034	BFO_2034		BFO_2034	2177827	2177982	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2028	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2034
BFO_2035	BFO_2035		BFO_2035	2177997	2179538	+	ThiC family	identified by match to protein family HMM PF01964	gene	gene2029	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2035
BFO_2036	BFO_2036		BFO_2036	2179563	2181683	+	Tex-like protein N-terminal domain protein	identified by match to protein family HMM PF00575%3B match to protein family HMM PF09371	gene	gene2030	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2036
BFO_2037	BFO_2037		BFO_2037	2181747	2181869	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2031	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2037
BFO_2038	BFO_2038		BFO_2038	2181887	2183131	-	hypothetical protein		gene	gene2032	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2038
BFO_2039	BFO_2039	mro_2	mro_2	2183315	2184397	+	aldose 1-epimerase	identified by match to protein family HMM PF01263	gene	gene2033	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2039
BFO_2040	BFO_2040		BFO_2040	2184444	2185751	+	transporter%2C major facilitator family protein	identified by match to protein family HMM PF07690	gene	gene2034	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2040
BFO_2041	BFO_2041	galK	galK	2185827	2186966	+	galactokinase	identified by match to protein family HMM PF00288%3B match to protein family HMM PF08544%3B match to protein family HMM TIGR00131	gene	gene2035	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2041
BFO_2042	BFO_2042		BFO_2042	2187108	2188499	+	IgA Peptidase M64	identified by match to protein family HMM PF09471	gene	gene2036	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2042
BFO_2043	BFO_2043		BFO_2043	2188505	2190394	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene2037	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2043
BFO_2044	BFO_2044		BFO_2044	2190429	2191916	-	putative inosine-5'-monophosphate dehydrogenase	identified by match to protein family HMM PF00478%3B match to protein family HMM PF00571	gene	gene2038	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2044
BFO_2045	BFO_2045	feoB	feoB	2192136	2194586	-	ferrous iron transport protein B	identified by match to protein family HMM PF01926%3B match to protein family HMM PF02421%3B match to protein family HMM PF04023%3B match to protein family HMM PF07664%3B match to protein family HMM PF07670%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00437	gene	gene2039	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2045
BFO_2046	BFO_2046		BFO_2046	2194699	2195106	-	hypothetical protein		gene	gene2040	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2046
BFO_2047	BFO_2047		BFO_2047	2195468	2196565	+	histidine kinase	identified by match to protein family HMM PF06580	gene	gene2041	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2047
BFO_2048	BFO_2048		BFO_2048	2196584	2197333	+	response regulator receiver domain protein	identified by match to protein family HMM PF00072%3B match to protein family HMM PF04397	gene	gene2042	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2048
BFO_2049	BFO_2049		BFO_2049	2198059	2199033	-	hypothetical protein		gene	gene2043	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2049
BFO_2050	BFO_2050		BFO_2050	2199294	2199512	+	hypothetical protein		gene	gene2044	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2050
BFO_2051	BFO_2051		BFO_2051	2199524	2199805	+	hypothetical protein		gene	gene2045	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2051
BFO_2052	BFO_2052		BFO_2052	2199818	2200408	+	hypothetical protein		gene	gene2046	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2052
BFO_2053	BFO_2053		BFO_2053	2200426	2200767	+		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene2047	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2053
BFO_2054	BFO_2054		BFO_2054	2200961	2201086	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2048	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2054
BFO_2055	BFO_2055		BFO_2055	2201100	2201354	+	hypothetical protein		gene	gene2049	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2055
BFO_2056	BFO_2056		BFO_2056	2201341	2201589	+	hypothetical protein		gene	gene2050	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2056
BFO_2057	BFO_2057		BFO_2057	2201589	2201702	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2051	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2057
BFO_2058	BFO_2058		BFO_2058	2202105	2202221	-	hypothetical protein		gene	gene2052	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2058
BFO_2059	BFO_2059		BFO_2059	2202218	2202994	-	hypothetical protein		gene	gene2053	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2059
BFO_2060	BFO_2060		BFO_2060	2203132	2203935	-	hypothetical protein	identified by match to protein family HMM PF08843	gene	gene2054	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2060
BFO_2061	BFO_2061		BFO_2061	2203932	2204738	-	hypothetical protein		gene	gene2055	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2061
BFO_2062	BFO_2062		BFO_2062	2204853	2205959	-	hypothetical protein	overlaps another CDS with the same product name	gene	gene2056	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2062
BFO_2063	BFO_2063		BFO_2063	2205956	2207827	-	hypothetical protein	overlaps another CDS with the same product name	gene	gene2057	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2063
BFO_2064	BFO_2064		BFO_2064	2207796	2208917	-	hypothetical protein		gene	gene2058	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2064
BFO_2065	BFO_2065		BFO_2065	2208914	2210809	-	hypothetical protein		gene	gene2059	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2065
BFO_2066	BFO_2066		BFO_2066	2210956	2212521	+	4Fe-4S binding domain protein	identified by match to protein family HMM PF00037	gene	gene2060	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2066
BFO_2067	BFO_2067		BFO_2067	2212542	2213684	+	Tat pathway signal sequence domain protein	identified by match to protein family HMM PF00248%3B match to protein family HMM TIGR01409	gene	gene2061	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2067
BFO_2068	BFO_2068	eno	eno	2213829	2215109	-	phosphopyruvate hydratase	identified by match to protein family HMM PF00113%3B match to protein family HMM PF03952%3B match to protein family HMM TIGR01060	gene	gene2062	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2068
BFO_2069	BFO_2069		BFO_2069	2215206	2215574	-	hypothetical protein	identified by match to protein family HMM PF09633	gene	gene2063	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2069
BFO_2070	BFO_2070		BFO_2070	2215586	2216080	-	flavodoxin	identified by match to protein family HMM PF00258%3B match to protein family HMM TIGR01752	gene	gene2064	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2070
BFO_2071	BFO_2071		BFO_2071	2216277	2217029	-	hypothetical protein		gene	gene2065	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2071
BFO_2072	BFO_2072		BFO_2072	2217154	2217480	-	hypothetical protein		gene	gene2066	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2072
BFO_2073	BFO_2073		BFO_2073	2217477	2218079	-	transporter%2C MotA/TolQ/ExbB proton channel family protein	identified by match to protein family HMM PF01618	gene	gene2067	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2073
BFO_2074	BFO_2074		BFO_2074	2218076	2218780	-	putative membrane protein		gene	gene2068	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2074
BFO_2075	BFO_2075		BFO_2075	2218782	2223167	-	CobN/magnesium chelatase domain protein	identified by match to protein family HMM PF02514	gene	gene2069	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2075
BFO_2076	BFO_2076		BFO_2076	2223195	2225441	-	putative TonB-dependent hemin utilization receptor HmuR	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715	gene	gene2070	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2076
BFO_2077	BFO_2077		BFO_2077	2225559	2227793	-	outer membrane porin BtuB family protein	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715	gene	gene2071	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2077
BFO_2078	BFO_2078		BFO_2078	2227807	2228463	-	putative lipoprotein		gene	gene2072	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2078
BFO_2079	BFO_2079		BFO_2079	2228602	2228745	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2073	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2079
BFO_2080	BFO_2080		BFO_2080	2229264	2229377	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2074	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2080
BFO_2081	BFO_2081		BFO_2081	2229386	2231926	+	ribonucleoside-diphosphate reductase%2C alpha subunit	identified by match to protein family HMM PF00317%3B match to protein family HMM PF02867%3B match to protein family HMM PF03477%3B match to protein family HMM TIGR02506	gene	gene2075	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2081
BFO_2082	BFO_2082		BFO_2082	2231961	2233013	+	ribonucleoside-diphosphate reductase%2C beta subunit	identified by match to protein family HMM PF00268	gene	gene2076	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2082
BFO_2083	BFO_2083		BFO_2083	2233797	2237123	+	repeat protein	identified by match to protein family HMM PF02415%3B match to protein family HMM TIGR02543	gene	gene2077	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2083
BFO_2084	BFO_2084		BFO_2084	2237133	2237255	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2078	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2084
BFO_2085	BFO_2085		BFO_2085	2237294	2238727	+	transposase%2C IS4 family	identified by match to protein family HMM PF01609	gene	gene2079	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2085
BFO_2086	BFO_2086		BFO_2086	2239208	2240038	+	TIGR01200 family protein	identified by match to protein family HMM PF09697	gene	gene2080	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2086
BFO_2087	BFO_2087		BFO_2087	2240223	2240399	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2081	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2087
BFO_2088	BFO_2088		BFO_2088	2240488	2241342	+	TIGR01200 family protein	identified by match to protein family HMM PF09697	gene	gene2082	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2088
BFO_2089	BFO_2089		BFO_2089	2241527	2241703	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2083	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2089
BFO_2090	BFO_2090		BFO_2090	2241792	2242649	+	TIGR01200 family protein	identified by match to protein family HMM PF09697	gene	gene2084	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2090
BFO_2091	BFO_2091		BFO_2091	2242655	2245282	+	hypothetical protein		gene	gene2085	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2091
BFO_2092	BFO_2092		BFO_2092	2245286	2246560	-	hypothetical protein	identified by match to protein family HMM PF07075	gene	gene2086	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2092
BFO_2093	BFO_2093		BFO_2093	2246580	2246840	+		ISPg2%2C transposase family protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2087	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2093
BFO_2094	BFO_2094	rplM	rplM	2246990	2247487	+	ribosomal protein L13	identified by match to protein family HMM PF00572%3B match to protein family HMM TIGR01066	gene	gene2088	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2094
BFO_2095	BFO_2095	rpsI	rpsI	2247493	2247879	+	ribosomal protein S9	identified by match to protein family HMM PF00380	gene	gene2089	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2095
BFO_2096	BFO_2096	rpsB	rpsB	2248021	2248881	+	ribosomal protein S2	identified by match to protein family HMM PF00318%3B match to protein family HMM TIGR01011	gene	gene2090	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2096
BFO_2097	BFO_2097	tsf	tsf	2248899	2249723	+	translation elongation factor Ts	identified by match to protein family HMM PF00627%3B match to protein family HMM PF00889%3B match to protein family HMM TIGR00116	gene	gene2091	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2097
BFO_2098	BFO_2098		BFO_2098	2249858	2250733	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene2092	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2098
BFO_2099	BFO_2099		BFO_2099	2250740	2251414	+	putative membrane protein		gene	gene2093	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2099
BFO_2100	BFO_2100		BFO_2100	2251438	2252661	+	hypothetical protein		gene	gene2094	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2100
BFO_2101	BFO_2101		BFO_2101	2252690	2253235	+	hypothetical protein		gene	gene2095	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2101
BFO_2102	BFO_2102		BFO_2102	2253238	2253807	+	PepSY domain protein	identified by match to protein family HMM PF03929	gene	gene2096	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2102
BFO_2103	BFO_2103		BFO_2103	2253959	2254432	-	hypothetical protein	identified by match to protein family HMM PF06713	gene	gene2097	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2103
BFO_2104	BFO_2104		BFO_2104	2254460	2255356	-	hypothetical protein		gene	gene2098	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2104
BFO_2105	BFO_2105		BFO_2105	2255460	2255636	-	hypothetical protein		gene	gene2099	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2105
BFO_2106	BFO_2106		BFO_2106	2255756	2256946	-	hypothetical protein		gene	gene2100	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2106
BFO_2107	BFO_2107		BFO_2107	2256959	2260147	-	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene2101	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2107
BFO_2108	BFO_2108		BFO_2108	2260313	2260444	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2102	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2108
BFO_2109	BFO_2109		BFO_2109	2260842	2261039	-	hypothetical protein		gene	gene2103	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2109
BFO_2110	BFO_2110		BFO_2110	2261144	2261308	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2104	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2110
BFO_2111	BFO_2111		BFO_2111	2261348	2261476	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2105	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2111
BFO_2112	BFO_2112	carB	carB	2261506	2264727	-	carbamoyl-phosphate synthase%2C large subunit	identified by match to protein family HMM PF00289%3B match to protein family HMM PF02142%3B match to protein family HMM PF02222%3B match to protein family HMM PF02786%3B match to protein family HMM PF02787%3B match to protein family HMM TIGR01369	gene	gene2106	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2112
BFO_2113	BFO_2113		BFO_2113	2264772	2265500	-	hypothetical protein		gene	gene2107	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2113
BFO_2114	BFO_2114		BFO_2114	2265488	2269330	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2108	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2114
BFO_2115	BFO_2115		BFO_2115	2269375	2269533	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2109	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2115
BFO_2116	BFO_2116		BFO_2116	2269549	2271810	-	TrkA C-terminal domain protein	identified by match to protein family HMM PF00999%3B match to protein family HMM PF02080	gene	gene2110	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2116
BFO_2117	BFO_2117		BFO_2117	2271908	2273035	-	hypothetical protein		gene	gene2111	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2117
BFO_2118	BFO_2118		BFO_2118	2273178	2274725	+	YjeF C-terminal domain protein	identified by match to protein family HMM PF01256%3B match to protein family HMM PF03853%3B match to protein family HMM TIGR00196%3B match to protein family HMM TIGR00197	gene	gene2112	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2118
BFO_2119	BFO_2119		BFO_2119	2274767	2274901	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2113	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2119
BFO_2120	BFO_2120		BFO_2120	2274913	2275113	+	hypothetical protein		gene	gene2114	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2120
BFO_2121	BFO_2121		BFO_2121	2275150	2275524	+	hypothetical protein		gene	gene2115	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2121
BFO_2122	BFO_2122		BFO_2122	2275527	2275832	+	hypothetical protein		gene	gene2116	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2122
BFO_2123	BFO_2123		BFO_2123	2275946	2277475	+	YmdA/YtgF family protein	identified by match to protein family HMM PF00013%3B match to protein family HMM PF01966%3B match to protein family HMM TIGR00277%3B match to protein family HMM TIGR03319	gene	gene2117	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2123
BFO_2124	BFO_2124		BFO_2124	2278821	2280440	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene2119	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2124
BFO_2125	BFO_2125	pncB	pncB	2277610	2278824	+	nicotinate phosphoribosyltransferase	identified by match to protein family HMM PF04095%3B match to protein family HMM TIGR01514	gene	gene2118	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2125
BFO_2126	BFO_2126		BFO_2126	2280666	2280736	-	tRNA-Cys		tRNA	gene2120	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2126
BFO_2127	BFO_2127	rfbC	rfbC	2280828	2281421	+	dTDP-4-dehydrorhamnose 3%2C5-epimerase	identified by match to protein family HMM PF00908%3B match to protein family HMM TIGR01221	gene	gene2121	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2127
BFO_2128	BFO_2128	rffG	rffG	2281435	2282583	+	dTDP-glucose 4%2C6-dehydratase	identified by match to protein family HMM PF00106%3B match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993%3B match to protein family HMM TIGR01181	gene	gene2122	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2128
BFO_2129	BFO_2129	recR	recR	2282588	2283211	+	recombination protein RecR	identified by match to protein family HMM PF01751%3B match to protein family HMM PF02132%3B match to protein family HMM TIGR00615	gene	gene2123	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2129
BFO_2130	BFO_2130		BFO_2130	2283216	2284385	+	glycosyltransferase%2C group 2 family protein	identified by match to protein family HMM PF00535	gene	gene2124	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2130
BFO_2131	BFO_2131		BFO_2131	2284404	2284934	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2125	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2131
BFO_2132	BFO_2132		BFO_2132	2285030	2285191	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2126	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2132
BFO_2133	BFO_2133		BFO_2133	2285278	2286252	+	DNA (cytosine-5-)-methyltransferase	identified by match to protein family HMM PF01555	gene	gene2127	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2133
BFO_2134	BFO_2134		BFO_2134	2286255	2286872	+	restriction endonuclease BglII	identified by match to protein family HMM PF09195	gene	gene2128	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2134
BFO_2135	BFO_2135		BFO_2135	2287081	2287154	-	tRNA-Arg		tRNA	gene2129	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2135
BFO_2136	BFO_2136	ung	ung	2287253	2287948	+	uracil-DNA glycosylase	identified by match to protein family HMM PF03167%3B match to protein family HMM TIGR00628	gene	gene2130	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2136
BFO_2137	BFO_2137		BFO_2137	2287949	2290705	-	hypothetical protein		gene	gene2131	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2137
BFO_2138	BFO_2138		BFO_2138	2290764	2291306	-	HDIG domain protein	identified by match to protein family HMM PF01966%3B match to protein family HMM TIGR00277	gene	gene2132	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2138
BFO_2139	BFO_2139		BFO_2139	2292595	2292768	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2134	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2139
BFO_2140	BFO_2140		BFO_2140	2291297	2292613	+	hypothetical protein	identified by match to protein family HMM PF07075	gene	gene2133	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2140
BFO_2141	BFO_2141	nqrF	nqrF	2292768	2294054	-	NADH:ubiquinone oxidoreductase%2C F subunit	identified by match to protein family HMM PF00111%3B match to protein family HMM PF00175%3B match to protein family HMM PF00970%3B match to protein family HMM TIGR01941	gene	gene2135	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2141
BFO_2142	BFO_2142	nqrE	nqrE	2294081	2294698	-	NADH:ubiquinone oxidoreductase%2C E subunit	identified by match to protein family HMM PF02508%3B match to protein family HMM TIGR01940	gene	gene2136	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2142
BFO_2143	BFO_2143	nqrD	nqrD	2294722	2295351	-	NADH:ubiquinone oxidoreductase%2C D subunit	identified by match to protein family HMM PF02508%3B match to protein family HMM TIGR01939	gene	gene2137	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2143
BFO_2144	BFO_2144	nqrC	nqrC	2295355	2296086	-	NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C C subunit	identified by match to protein family HMM PF04205%3B match to protein family HMM TIGR01938	gene	gene2138	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2144
BFO_2145	BFO_2145	nqrB	nqrB	2296083	2297270	-	NADH:ubiquinone oxidoreductase%2C B subunit	identified by match to protein family HMM PF03116%3B match to protein family HMM TIGR01937	gene	gene2139	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2145
BFO_2146	BFO_2146	nqrA	nqrA	2297441	2298826	-	NADH:ubiquinone oxidoreductase%2C Na(+)-translocating%2C A subunit	identified by match to protein family HMM PF05896%3B match to protein family HMM TIGR01936	gene	gene2140	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2146
BFO_2147	BFO_2147		BFO_2147	2299191	2300210	+	endonuclease/exonuclease/phosphatase family protein	identified by match to protein family HMM PF03372	gene	gene2141	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2147
BFO_2148	BFO_2148		BFO_2148	2300242	2301927	+	peptidase%2C M23 family	identified by match to protein family HMM PF01551	gene	gene2142	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2148
BFO_2149	BFO_2149	pgcA	pgcA	2302133	2303884	+	phosphoglucomutase	identified by match to protein family HMM PF02878%3B match to protein family HMM PF02879%3B match to protein family HMM PF02880	gene	gene2143	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2149
BFO_2150	BFO_2150	queF	queF	2304028	2304501	-	preQ(1) synthase	identified by match to protein family HMM PF01227%3B match to protein family HMM TIGR03139	gene	gene2144	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2150
BFO_2151	BFO_2151	cgtA	cgtA	2304626	2305777	-	Obg family GTPase CgtA	identified by match to protein family HMM PF01018%3B match to protein family HMM PF01926%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR02729	gene	gene2145	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2151
BFO_2152	BFO_2152		BFO_2152	2305823	2306401	-	adenylate kinase	identified by match to protein family HMM PF00406%3B match to protein family HMM TIGR01351	gene	gene2146	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2152
BFO_2153	BFO_2153		BFO_2153	2306426	2306968	-	putative hypoxanthine phosphoribosyltransferase	identified by match to protein family HMM PF00156	gene	gene2147	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2153
BFO_2154	BFO_2154		BFO_2154	2307201	2308292	+	hypothetical protein		gene	gene2148	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2154
BFO_2155	BFO_2155		BFO_2155	2308289	2308945	+	hypothetical protein		gene	gene2149	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2155
BFO_2156	BFO_2156		BFO_2156	2308998	2309405	+	glyoxalase family protein	identified by match to protein family HMM PF00903	gene	gene2150	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2156
BFO_2157	BFO_2157		BFO_2157	2309649	2312024	+	putative membrane protein		gene	gene2151	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2157
BFO_2158	BFO_2158		BFO_2158	2311987	2313189	+	hypothetical protein		gene	gene2152	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2158
BFO_2159	BFO_2159		BFO_2159	2313191	2314141	-	glycosyltransferase%2C group 2 family protein	identified by match to protein family HMM PF00535	gene	gene2153	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2159
BFO_2160	BFO_2160		BFO_2160	2314138	2314899	-	hypothetical protein		gene	gene2154	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2160
BFO_2161	BFO_2161		BFO_2161	2315024	2316487	+	transporter%2C SSS family	identified by match to protein family HMM PF00474	gene	gene2155	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2161
BFO_2162	BFO_2162		BFO_2162	2316503	2317903	-	inner membrane protein CreD	identified by match to protein family HMM PF06123	gene	gene2156	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2162
BFO_2163	BFO_2163		BFO_2163	2317994	2318308	-	hypothetical protein		gene	gene2157	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2163
BFO_2164	BFO_2164		BFO_2164	2318305	2318814	-	hypothetical protein		gene	gene2158	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2164
BFO_2165	BFO_2165		BFO_2165	2318861	2318986	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2159	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2165
BFO_2166	BFO_2166		BFO_2166	2319051	2320391	+	transposase%2C IS4 family	identified by match to protein family HMM PF01609	gene	gene2160	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2166
BFO_2167	BFO_2167		BFO_2167	2320398	2320553	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2161	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2167
BFO_2168	BFO_2168		BFO_2168	2320613	2326414	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2162	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2168
BFO_2169	BFO_2169		BFO_2169	2326465	2326584	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2163	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2169
BFO_2170	BFO_2170		BFO_2170	2326704	2326841	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2164	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2170
BFO_2171	BFO_2171		BFO_2171	2326928	2328043	+	antioxidant%2C AhpC/TSA family	identified by match to protein family HMM PF00578%3B match to protein family HMM PF08534	gene	gene2165	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2171
BFO_2172	BFO_2172		BFO_2172	2328107	2328778	-	pseudouridine synthase%2C RluA family	identified by match to protein family HMM PF00849	gene	gene2166	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2172
BFO_2173	BFO_2173		BFO_2173	2328895	2330007	-	beta-lactamase	identified by match to protein family HMM PF00144	gene	gene2167	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2173
BFO_2174	BFO_2174	fabG_2	fabG_2	2330052	2330798	-	3-oxoacyl-[acyl-carrier-protein] reductase	identified by match to protein family HMM PF00106%3B match to protein family HMM PF01370%3B match to protein family HMM PF08659%3B match to protein family HMM TIGR01830	gene	gene2168	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2174
BFO_2175	BFO_2175	fabHA_3	fabHA_3	2330852	2331796	-	beta-ketoacyl-acyl-carrier-protein synthase III	identified by match to protein family HMM PF08541%3B match to protein family HMM PF08545	gene	gene2169	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2175
BFO_2176	BFO_2176		BFO_2176	2331786	2332400	-	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene2170	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2176
BFO_2177	BFO_2177		BFO_2177	2332537	2332611	+	tRNA-Met		tRNA	gene2171	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2177
BFO_2178	BFO_2178		BFO_2178	2332727	2333008	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2172	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2178
BFO_2179	BFO_2179		BFO_2179	2332980	2333615	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2173	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2179
BFO_2180	BFO_2180		BFO_2180	2333807	2334718	-	hypothetical protein		gene	gene2174	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2180
BFO_2181	BFO_2181		BFO_2181	2334709	2335437	-		tetratricopeptide repeat protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2175	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2181
BFO_2182	BFO_2182		BFO_2182	2335528	2337720	-	glycosyl hydrolase family 3%2C N-terminal domain protein	identified by match to protein family HMM PF00933%3B match to protein family HMM PF01915	gene	gene2176	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2182
BFO_2183	BFO_2183		BFO_2183	2337850	2338542	-	OmpA family protein	identified by match to protein family HMM PF00691	gene	gene2177	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2183
BFO_2184	BFO_2184		BFO_2184	2338671	2338802	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2178	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2184
BFO_2185	BFO_2185		BFO_2185	2338802	2339452	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2179	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2185
BFO_2186	BFO_2186		BFO_2186	2339460	2339666	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2180	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2186
BFO_2187	BFO_2187		BFO_2187	2339674	2340312	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2181	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2187
BFO_2188	BFO_2188		BFO_2188	2340425	2340667	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2182	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2188
BFO_2189	BFO_2189	clpB	clpB	2340745	2343426	-	ATP-dependent chaperone protein ClpB	identified by match to protein family HMM PF00004%3B match to protein family HMM PF02861%3B match to protein family HMM PF07724%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR03346	gene	gene2183	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2189
BFO_2190	BFO_2190	yeaZ	yeaZ	2343567	2344250	+	universal bacterial protein YeaZ	identified by match to protein family HMM PF00814%3B match to protein family HMM TIGR03725	gene	gene2184	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2190
BFO_2191	BFO_2191		BFO_2191	2344247	2345140	+	hypothetical protein		gene	gene2185	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2191
BFO_2192	BFO_2192		BFO_2192	2345590	2347740	-		response regulator receiver domain protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF00072%3B match to protein family HMM PF00165%3B match to protein family HMM PF00512%3B match to protein family HMM PF02518	pseudogene	gene2186	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2192
BFO_2193	BFO_2193		BFO_2193	2347741	2348451	-		tetratricopeptide repeat protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene2187	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2193
BFO_2194	BFO_2194		BFO_2194	2348486	2349754	-	hypothetical protein		gene	gene2188	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2194
BFO_2195	BFO_2195		BFO_2195	2349759	2349890	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2189	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2195
BFO_2196	BFO_2196		BFO_2196	2350229	2351143	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2190	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2196
BFO_2197	BFO_2197		BFO_2197	2351164	2352420	+	hypothetical protein		gene	gene2191	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2197
BFO_2198	BFO_2198		BFO_2198	2352547	2352984	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2192	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2198
BFO_2199	BFO_2199		BFO_2199	2353046	2353119	-	tRNA-His		tRNA	gene2193	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2199
BFO_2200	BFO_2200		BFO_2200	2353140	2353283	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2194	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2200
BFO_2201	BFO_2201		BFO_2201	2353865	2353984	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2195	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2201
BFO_2202	BFO_2202		BFO_2202	2354086	2355003	+	dihydrodipicolinate synthetase family	identified by match to protein family HMM PF00701	gene	gene2196	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2202
BFO_2203	BFO_2203		BFO_2203	2355009	2356187	+	N-acylglucosamine 2-epimerase	identified by match to protein family HMM PF07221	gene	gene2197	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2203
BFO_2204	BFO_2204		BFO_2204	2356212	2357456	+	transporter%2C major facilitator family protein	identified by match to protein family HMM PF07690	gene	gene2198	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2204
BFO_2205	BFO_2205		BFO_2205	2357489	2360824	+	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene2199	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2205
BFO_2206	BFO_2206		BFO_2206	2360849	2362420	+	SusD family protein	identified by match to protein family HMM PF07980	gene	gene2200	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2206
BFO_2207	BFO_2207		BFO_2207	2362503	2364122	+	BNR/Asp-box repeat protein	identified by match to protein family HMM PF02012	gene	gene2201	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2207
BFO_2208	BFO_2208		BFO_2208	2364119	2366116	+	glycosyl hydrolase family 20%2C catalytic domain protein	identified by match to protein family HMM PF00728	gene	gene2202	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2208
BFO_2209	BFO_2209		BFO_2209	2366134	2368212	+	GDSL-like protein	identified by match to protein family HMM PF00657%3B match to protein family HMM PF03629	gene	gene2203	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2209
BFO_2210	BFO_2210		BFO_2210	2368220	2369434	+	cyclically-permuted mutarotase family protein	identified by match to protein family HMM PF01344%3B match to protein family HMM TIGR03548	gene	gene2204	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2210
BFO_2211	BFO_2211		BFO_2211	2369702	2371174	-	PepSY domain protein	identified by match to protein family HMM PF03929	gene	gene2205	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2211
BFO_2212	BFO_2212		BFO_2212	2371188	2371526	-	hypothetical protein		gene	gene2206	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2212
BFO_2213	BFO_2213		BFO_2213	2371713	2374160	-	TonB-dependent siderophore receptor	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715	gene	gene2207	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2213
BFO_2214	BFO_2214		BFO_2214	2374123	2375058	-	putative sirohydrochlorin cobaltochelatase	identified by match to protein family HMM PF01903%3B match to protein family HMM PF06180	gene	gene2208	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2214
BFO_2215	BFO_2215		BFO_2215	2375152	2376615	-	PepSY domain protein	identified by match to protein family HMM PF03929	gene	gene2209	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2215
BFO_2216	BFO_2216		BFO_2216	2376629	2377903	-	putative lipoprotein		gene	gene2210	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2216
BFO_2217	BFO_2217		BFO_2217	2377921	2380281	-	TonB-dependent receptor	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715	gene	gene2211	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2217
BFO_2219	BFO_2219		BFO_2219	2380820	2381998	+	ApbE family protein	identified by match to protein family HMM PF02424	gene	gene2212	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2219
BFO_2220	BFO_2220		BFO_2220	2382139	2382327	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2214	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2220
BFO_2221	BFO_2221		BFO_2221	2382072	2382185	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2213	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2221
BFO_2222	BFO_2222		BFO_2222	2382343	2383350	-	Ser/Thr phosphatase family protein	identified by match to protein family HMM PF00149	gene	gene2215	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2222
BFO_2223	BFO_2223		BFO_2223	2383354	2383518	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2216	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2223
BFO_2224	BFO_2224		BFO_2224	2383543	2385567	+	HDIG domain protein	identified by match to protein family HMM PF01966%3B match to protein family HMM PF07698%3B match to protein family HMM TIGR00277	gene	gene2217	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2224
BFO_2225	BFO_2225		BFO_2225	2385740	2385862	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2218	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2225
BFO_2226	BFO_2226		BFO_2226	2385909	2386073	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2219	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2226
BFO_2227	BFO_2227		BFO_2227	2386115	2386681	+	flavodoxin		gene	gene2220	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2227
BFO_2228	BFO_2228		BFO_2228	2386654	2386767	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2221	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2228
BFO_2229	BFO_2229		BFO_2229	2387034	2387444	+		conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2222	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2229
BFO_2230	BFO_2230		BFO_2230	2387423	2387548	+		integrase%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2223	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2230
BFO_2231	BFO_2231		BFO_2231	2387561	2387968	+		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene2224	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2231
BFO_2232	BFO_2232		BFO_2232	2388131	2388835	+	hypothetical protein	identified by match to protein family HMM PF06250	gene	gene2225	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2232
BFO_2233	BFO_2233		BFO_2233	2389422	2389550	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2226	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2233
BFO_2234	BFO_2234		BFO_2234	2389538	2389654	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2227	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2234
BFO_2235	BFO_2235		BFO_2235	2389642	2389941	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2228	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2235
BFO_2236	BFO_2236		BFO_2236	2390065	2391084	+	hypothetical protein		gene	gene2229	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2236
BFO_2237	BFO_2237		BFO_2237	2391128	2393089	-	tetratricopeptide repeat protein	identified by match to protein family HMM PF04932	gene	gene2230	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2237
BFO_2238	BFO_2238		BFO_2238	2393211	2394398	-	putative membrane protein		gene	gene2231	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2238
BFO_2239	BFO_2239		BFO_2239	2394405	2396708	-	hypothetical protein		gene	gene2232	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2239
BFO_2240	BFO_2240		BFO_2240	2396714	2398576	-		conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2233	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2240
BFO_2241	BFO_2241		BFO_2241	2398569	2399018	-		conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2234	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2241
BFO_2242	BFO_2242		BFO_2242	2399024	2401318	-	hypothetical protein		gene	gene2235	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2242
BFO_2243	BFO_2243		BFO_2243	2401538	2401732	-	hypothetical protein		gene	gene2236	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2243
BFO_2244	BFO_2244		BFO_2244	2401766	2403115	-	radical SAM domain protein	identified by match to protein family HMM PF04055	gene	gene2237	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2244
BFO_2245	BFO_2245		BFO_2245	2403147	2405099	-	hypothetical protein		gene	gene2238	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2245
BFO_2246	BFO_2246		BFO_2246	2405237	2405953	-	transcriptional regulator%2C LuxR family	identified by match to protein family HMM PF00196	gene	gene2239	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2246
BFO_2247	BFO_2247		BFO_2247	2406306	2409092	+	hypothetical protein		gene	gene2240	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2247
BFO_2248	BFO_2248		BFO_2248	2409241	2410188	-	NAD dependent epimerase/dehydratase family protein	identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993	gene	gene2241	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2248
BFO_2249	BFO_2249		BFO_2249	2410173	2410307	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2242	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2249
BFO_2250	BFO_2250		BFO_2250	2410318	2410395	+	tRNA-Pro		tRNA	gene2243	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2250
BFO_2251	BFO_2251		BFO_2251	2410533	2410682	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2244	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2251
BFO_2252	BFO_2252		BFO_2252	2410663	2410962	+	toxin-antitoxin system%2C toxin component%2C RelE family		gene	gene2245	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2252
BFO_2253	BFO_2253		BFO_2253	2410962	2411339	+	DNA-binding helix-turn-helix protein	identified by match to protein family HMM PF01381	gene	gene2246	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2253
BFO_2254	BFO_2254		BFO_2254	2411574	2412494	-	carbohydrate kinase%2C PfkB family	identified by match to protein family HMM PF00294	gene	gene2247	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2254
BFO_2255	BFO_2255		BFO_2255	2412536	2412709	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2248	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2255
BFO_2256	BFO_2256		BFO_2256	2412854	2414023	+	peptidase C1-like family	identified by match to protein family HMM PF03051	gene	gene2249	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2256
BFO_2257	BFO_2257		BFO_2257	2414030	2414494	+	hypothetical protein		gene	gene2250	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2257
BFO_2258	BFO_2258	pstS	pstS	2414620	2415579	-	phosphate binding protein		gene	gene2251	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2258
BFO_2259	BFO_2259	coaA	coaA	2415762	2416715	+	pantothenate kinase	identified by match to protein family HMM PF00485%3B match to protein family HMM TIGR00554	gene	gene2252	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2259
BFO_2260	BFO_2260		BFO_2260	2416865	2417485	+	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene2253	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2260
BFO_2261	BFO_2261		BFO_2261	2417602	2418864	+	hypothetical protein		gene	gene2254	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2261
BFO_2262	BFO_2262		BFO_2262	2418913	2419818	+	hypothetical protein		gene	gene2255	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2262
BFO_2263	BFO_2263		BFO_2263	2419815	2420735	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene2256	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2263
BFO_2264	BFO_2264		BFO_2264	2420732	2421475	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene2257	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2264
BFO_2265	BFO_2265		BFO_2265	2421483	2422589	+	ABC-2 type transporter	identified by match to protein family HMM PF01061	gene	gene2258	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2265
BFO_2266	BFO_2266		BFO_2266	2422597	2423715	+	ABC-2 type transporter	identified by match to protein family HMM PF01061	gene	gene2259	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2266
BFO_2267	BFO_2267		BFO_2267	2423735	2424292	+	hypothetical protein		gene	gene2260	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2267
BFO_2268	BFO_2268		BFO_2268	2424580	2425938	-	hypothetical protein		gene	gene2261	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2268
BFO_2269	BFO_2269		BFO_2269	2425996	2427135	-	putative lipoprotein		gene	gene2262	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2269
BFO_2270	BFO_2270		BFO_2270	2427184	2428767	-	SusD family protein	identified by match to protein family HMM PF07980	gene	gene2263	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2270
BFO_2271	BFO_2271		BFO_2271	2428792	2431836	-	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene2264	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2271
BFO_2272	BFO_2272		BFO_2272	2431856	2433982	-	hypothetical protein		gene	gene2265	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2272
BFO_2273	BFO_2273		BFO_2273	2434188	2434913	-	methyltransferase domain protein	identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene2266	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2273
BFO_2274	BFO_2274	tgt	tgt	2435269	2436399	+	tRNA-guanine transglycosylase	identified by match to protein family HMM PF01702%3B match to protein family HMM TIGR00430%3B match to protein family HMM TIGR00449	gene	gene2267	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2274
BFO_2275	BFO_2275		BFO_2275	2437480	2437605	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2269	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2275
BFO_2276	BFO_2276		BFO_2276	2436401	2437501	+	permease%2C YjgP/YjgQ family	identified by match to protein family HMM PF03739	gene	gene2268	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2276
BFO_2277	BFO_2277		BFO_2277	2437585	2439345	+	dolichyl-phosphate-mannose-protein mannosyltransferase	identified by match to protein family HMM PF02366	gene	gene2270	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2277
BFO_2278	BFO_2278		BFO_2278	2439433	2439924	+	oxidoreductase	identified by match to protein family HMM PF09719%3B match to protein family HMM TIGR01909	gene	gene2271	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2278
BFO_2279	BFO_2279		BFO_2279	2440145	2440306	-	rubredoxin	identified by match to protein family HMM PF00301	gene	gene2272	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2279
BFO_2280	BFO_2280		BFO_2280	2440582	2441526	-	LysR substrate binding domain protein	identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466	gene	gene2273	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2280
BFO_2281	BFO_2281	dps	dps	2441652	2442128	+	DNA protection during starvation protein	identified by match to protein family HMM PF00210	gene	gene2274	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2281
BFO_2282	BFO_2282		BFO_2282	2442208	2443311	-	transporter%2C small conductance mechanosensitive ion channel MscS family protein	identified by match to protein family HMM PF00924	gene	gene2275	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2282
BFO_2283	BFO_2283		BFO_2283	2443463	2444218	-	ThiF family protein	identified by match to protein family HMM PF00899	gene	gene2276	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2283
BFO_2284	BFO_2284		BFO_2284	2444368	2444754	-	putative undecaprenol kinase		gene	gene2277	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2284
BFO_2285	BFO_2285		BFO_2285	2445130	2446347	+	putative unsaturated glucuronyl hydrolase	identified by match to protein family HMM PF07470	gene	gene2278	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2285
BFO_2286	BFO_2286		BFO_2286	2446405	2449530	+	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene2279	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2286
BFO_2287	BFO_2287		BFO_2287	2449542	2451248	+	SusD family protein	identified by match to protein family HMM PF07980	gene	gene2280	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2287
BFO_2288	BFO_2288		BFO_2288	2451447	2452289	+	4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase	identified by match to protein family HMM PF04962	gene	gene2281	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2288
BFO_2289	BFO_2289		BFO_2289	2452303	2453445	+	putative lipoprotein		gene	gene2282	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2289
BFO_2290	BFO_2290		BFO_2290	2453442	2454992	+	arylsulfatase	identified by match to protein family HMM PF00884	gene	gene2283	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2290
BFO_2291	BFO_2291		BFO_2291	2455029	2456954	+	heparinase II/III-like protein	identified by match to protein family HMM PF07940	gene	gene2284	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2291
BFO_2292	BFO_2292		BFO_2292	2456989	2458029	+	carbohydrate kinase%2C PfkB family	identified by match to protein family HMM PF00294	gene	gene2285	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2292
BFO_2293	BFO_2293	gno	gno	2458066	2458857	+	gluconate 5-dehydrogenase	identified by match to protein family HMM PF00106	gene	gene2286	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2293
BFO_2294	BFO_2294		BFO_2294	2458875	2459555	+	KDPG and KHG aldolase	identified by match to protein family HMM PF01081	gene	gene2287	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2294
BFO_2295	BFO_2295		BFO_2295	2459605	2461032	+	transporter%2C major facilitator family protein	identified by match to protein family HMM PF07690	gene	gene2288	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2295
BFO_2296	BFO_2296		BFO_2296	2461259	2461435	-	hypothetical protein		gene	gene2289	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2296
BFO_2297	BFO_2297		BFO_2297	2461580	2461918	+	hypothetical protein		gene	gene2290	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2297
BFO_2298	BFO_2298		BFO_2298	2461960	2463165	-	putative lipoprotein		gene	gene2291	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2298
BFO_2299	BFO_2299		BFO_2299	2463328	2464554	+	efflux ABC transporter%2C permease protein	identified by match to protein family HMM PF02687	gene	gene2292	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2299
BFO_2300	BFO_2300		BFO_2300	2464558	2465634	+	efflux transporter%2C RND family%2C MFP subunit	identified by match to protein family HMM TIGR01730	gene	gene2293	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2300
BFO_2301	BFO_2301		BFO_2301	2465686	2466327	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2294	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2301
BFO_2302	BFO_2302		BFO_2302	2466324	2468081	+	tetratricopeptide repeat protein	identified by match to protein family HMM PF07719	gene	gene2295	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2302
BFO_2303	BFO_2303		BFO_2303	2468581	2468706	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2296	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2303
BFO_2304	BFO_2304		BFO_2304	2469164	2469814	+	hypothetical protein		gene	gene2297	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2304
BFO_2305	BFO_2305		BFO_2305	2470286	2470693	+	putative membrane protein	identified by match to protein family HMM PF01944	gene	gene2298	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2305
BFO_2306	BFO_2306		BFO_2306	2470693	2471259	+	hypothetical protein		gene	gene2299	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2306
BFO_2307	BFO_2307		BFO_2307	2471268	2473220	+	F5/8 type C domain protein	identified by match to protein family HMM PF00754	gene	gene2300	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2307
BFO_2308	BFO_2308		BFO_2308	2473469	2473774	-		conserved hypothetical protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene2301	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2308
BFO_2309	BFO_2309		BFO_2309	2473922	2474632	-		conserved hypothetical protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene2302	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2309
BFO_2310	BFO_2310		BFO_2310	2474662	2474775	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2303	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2310
BFO_2311	BFO_2311		BFO_2311	2474880	2475458	-	hypothetical protein		gene	gene2304	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2311
BFO_2312	BFO_2312		BFO_2312	2475478	2475594	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2305	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2312
BFO_2313	BFO_2313	ispD	ispD	2475822	2476487	-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	identified by match to protein family HMM PF01128%3B match to protein family HMM TIGR00453	gene	gene2306	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2313
BFO_2314	BFO_2314		BFO_2314	2476498	2476701	-	exodeoxyribonuclease VII%2C small subunit family protein		gene	gene2307	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2314
BFO_2315	BFO_2315	xseA	xseA	2476717	2478048	-	exodeoxyribonuclease VII%2C large subunit	identified by match to protein family HMM PF02601%3B match to protein family HMM TIGR00237	gene	gene2308	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2315
BFO_2316	BFO_2316		BFO_2316	2478035	2479483	-	peptidase%2C S8/S53 family	identified by match to protein family HMM PF00082	gene	gene2309	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2316
BFO_2317	BFO_2317		BFO_2317	2479484	2479615	+	hypothetical protein		gene	gene2310	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2317
BFO_2318	BFO_2318	asnA	asnA	2479688	2480722	+	aspartate--ammonia ligase	identified by match to protein family HMM PF03590%3B match to protein family HMM TIGR00669	gene	gene2311	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2318
BFO_2319	BFO_2319		BFO_2319	2480744	2482939	+	glutamine synthetase%2C catalytic domain protein	identified by match to protein family HMM PF00120	gene	gene2312	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2319
BFO_2320	BFO_2320	nadE	nadE	2483153	2485084	+	NAD+ synthase	identified by match to protein family HMM PF00795%3B match to protein family HMM PF02540%3B match to protein family HMM TIGR00552	gene	gene2313	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2320
BFO_2321	BFO_2321		BFO_2321	2485099	2487402	+	phospholipase%2C patatin family	identified by match to protein family HMM PF01734	gene	gene2314	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2321
BFO_2322	BFO_2322		BFO_2322	2487475	2487548	+	tRNA-Arg		tRNA	gene2315	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2322
BFO_2323	BFO_2323		BFO_2323	2487734	2488378	+	hypothetical protein	identified by match to protein family HMM PF02677	gene	gene2316	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2323
BFO_2324	BFO_2324		BFO_2324	2488375	2489409	+	hypothetical protein	identified by match to protein family HMM PF04371	gene	gene2317	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2324
BFO_2325	BFO_2325		BFO_2325	2489415	2490293	+	hydrolase%2C carbon-nitrogen family	identified by match to protein family HMM PF00795	gene	gene2318	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2325
BFO_2326	BFO_2326		BFO_2326	2490319	2490903	+	RNA polymerase sigma-70 factor	identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937%3B match to protein family HMM TIGR02985	gene	gene2319	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2326
BFO_2327	BFO_2327		BFO_2327	2490945	2491094	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2320	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2327
BFO_2328	BFO_2328	cas6	cas6	2491036	2491836	+	CRISPR-associated endoribonuclease Cas6	identified by match to protein family HMM PF01881%3B match to protein family HMM TIGR01877	gene	gene2321	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2328
BFO_2329	BFO_2329		BFO_2329	2491862	2492485	+	hypothetical protein	identified by match to protein family HMM PF07929	gene	gene2322	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2329
BFO_2330	BFO_2330		BFO_2330	2492553	2493278	+	CRISPR-associated protein%2C Cas5p family	identified by match to protein family HMM TIGR03488	gene	gene2323	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2330
BFO_2331	BFO_2331		BFO_2331	2493271	2494812	+	CRISPR-associated protein%2C Csp2 family	identified by match to protein family HMM TIGR03487	gene	gene2324	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2331
BFO_2332	BFO_2332	csp1	csp1	2494832	2495749	+	CRISPR-associated protein%2C Csp1 family	identified by match to protein family HMM TIGR01875%3B match to protein family HMM TIGR03489	gene	gene2325	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2332
BFO_2333	BFO_2333	cas3	cas3	2495937	2498021	+	CRISPR-associated helicase Cas3	identified by match to protein family HMM TIGR01587	gene	gene2326	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2333
BFO_2334	BFO_2334		BFO_2334	2498054	2498608	+	hypothetical protein		gene	gene2327	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2334
BFO_2335	BFO_2335		BFO_2335	2498631	2499629	+	Fic family protein	identified by match to protein family HMM PF02661	gene	gene2328	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2335
BFO_2336	BFO_2336	cas4	cas4	2499904	2500434	+	CRISPR-associated protein Cas4	identified by match to protein family HMM PF01930%3B match to protein family HMM TIGR00372	gene	gene2329	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2336
BFO_2337	BFO_2337		BFO_2337	2500481	2501923	+	hypothetical protein		gene	gene2330	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2337
BFO_2338	BFO_2338	csm2	csm2	2501929	2502399	+	CRISPR-associated protein%2C Csm2 family	identified by match to protein family HMM TIGR01870	gene	gene2331	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2338
BFO_2339	BFO_2339	csm3	csm3	2502409	2503047	+	CRISPR-associated RAMP protein%2C Csm3 family	identified by match to protein family HMM PF03787%3B match to protein family HMM TIGR02582	gene	gene2332	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2339
BFO_2340	BFO_2340	csm4	csm4	2503047	2504042	+	CRISPR-associated RAMP protein%2C Csm4 family	identified by match to protein family HMM TIGR01903	gene	gene2333	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2340
BFO_2341	BFO_2341	csm5	csm5	2504055	2505209	+	CRISPR-associated RAMP protein%2C Csm5 family	identified by match to protein family HMM TIGR01899	gene	gene2334	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2341
BFO_2342	BFO_2342		BFO_2342	2505211	2506455	+	CRISPR-associated protein%2C TM1812 family	identified by match to protein family HMM PF09530%3B match to protein family HMM TIGR02221%3B match to protein family HMM TIGR02549	gene	gene2335	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2342
BFO_2343	BFO_2343	cas1	cas1	2506848	2507864	+	CRISPR-associated endonuclease Cas1%2C HMARI/TNEAP subtype	identified by match to protein family HMM PF01867%3B match to protein family HMM TIGR00287%3B match to protein family HMM TIGR03641	gene	gene2336	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2343
BFO_2344	BFO_2344		BFO_2344	2507864	2508127	+	CRISPR-associated protein Cas2	identified by match to protein family HMM PF02647	gene	gene2337	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2344
BFO_2489	BFO_2489		BFO_2489	2513465	2513641	-		conserved hypothetical protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene2338	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2489
BFO_2490	BFO_2490		BFO_2490	2514257	2514403	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2339	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2490
BFO_2491	BFO_2491		BFO_2491	2514667	2514798	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2340	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2491
BFO_2492	BFO_2492		BFO_2492	2514818	2515000	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2341	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2492
BFO_2493	BFO_2493		BFO_2493	2515220	2515360	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2342	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2493
BFO_2494	BFO_2494		BFO_2494	2515920	2516444	+	putative ferritin-1	identified by match to protein family HMM PF00210	gene	gene2343	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2494
BFO_2495	BFO_2495		BFO_2495	2516708	2518909	-	V-type H(+)-translocating pyrophosphatase	identified by match to protein family HMM PF03030%3B match to protein family HMM TIGR01104	gene	gene2344	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2495
BFO_2496	BFO_2496		BFO_2496	2519017	2519184	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2345	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2496
BFO_2497	BFO_2497	nspC	nspC	2519562	2520698	-	carboxynorspermidine decarboxylase	identified by match to protein family HMM PF00278%3B match to protein family HMM TIGR01047	gene	gene2346	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2497
BFO_2498	BFO_2498		BFO_2498	2520703	2522997	-	putative ATP-dependent DNA helicase PcrA	identified by match to protein family HMM PF00580	gene	gene2347	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2498
BFO_2499	BFO_2499		BFO_2499	2523252	2523749	+	putative DNA-binding protein HU	identified by match to protein family HMM PF00216	gene	gene2348	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2499
BFO_2500	BFO_2500	folB	folB	2523924	2524310	-	dihydroneopterin aldolase	identified by match to protein family HMM PF02152%3B match to protein family HMM TIGR00525%3B match to protein family HMM TIGR00526	gene	gene2349	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2500
BFO_2501	BFO_2501		BFO_2501	2524781	2527426	-	putative 4-alpha-glucanotransferase	identified by match to protein family HMM PF02446	gene	gene2351	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2501
BFO_2502	BFO_2502		BFO_2502	2524369	2524788	+	hypothetical protein	identified by match to protein family HMM PF04519	gene	gene2350	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2502
BFO_2503	BFO_2503		BFO_2503	2527493	2530030	-	ribonucleoside-diphosphate reductase%2C adenosylcobalamin-dependent	identified by match to protein family HMM PF02867%3B match to protein family HMM TIGR02504	gene	gene2352	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2503
BFO_2504	BFO_2504		BFO_2504	2530446	2530616	-	ferredoxin	identified by match to protein family HMM PF00037	gene	gene2353	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2504
BFO_2505	BFO_2505	cdsA	cdsA	2531457	2532275	-	phosphatidate cytidylyltransferase	identified by match to protein family HMM PF01148	gene	gene2355	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2505
BFO_2506	BFO_2506	porT	porT	2530775	2531470	+	PorT protein		gene	gene2354	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2506
BFO_2507	BFO_2507	hflB	hflB	2532324	2534324	-	ATP-dependent metallopeptidase HflB	identified by match to protein family HMM PF00004%3B match to protein family HMM PF01434%3B match to protein family HMM PF06480%3B match to protein family HMM TIGR01241	gene	gene2356	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2507
BFO_2508	BFO_2508		BFO_2508	2534348	2534707	-	iojap-like protein	identified by match to protein family HMM PF02410%3B match to protein family HMM TIGR00090	gene	gene2357	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2508
BFO_2509	BFO_2509		BFO_2509	2534821	2534894	+	tRNA-Gln		tRNA	gene2358	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2509
BFO_2510	BFO_2510		BFO_2510	2535762	2536205	+	hypothetical protein		gene	gene2359	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2510
BFO_2511	BFO_2511		BFO_2511	2537039	2543461	+	repeat protein	identified by match to protein family HMM TIGR02543	gene	gene2360	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2511
BFO_2512	BFO_2512		BFO_2512	2543689	2543877	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2361	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2512
BFO_2513	BFO_2513		BFO_2513	2543929	2547339	+	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene2362	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2513
BFO_2514	BFO_2514		BFO_2514	2547384	2549258	+	putative lipoprotein		gene	gene2363	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2514
BFO_2515	BFO_2515		BFO_2515	2549349	2550284	-	hypothetical protein		gene	gene2365	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2515
BFO_2516	BFO_2516		BFO_2516	2549234	2549368	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2364	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2516
BFO_2517	BFO_2517		BFO_2517	2550351	2552285	+	hypothetical protein		gene	gene2366	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2517
BFO_2518	BFO_2518		BFO_2518	2553128	2553274	+	hypothetical protein		gene	gene2367	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2518
BFO_2519	BFO_2519		BFO_2519	2553356	2554300	-	putative enoyl-[acyl-carrier-protein] reductase II	identified by match to protein family HMM PF03060	gene	gene2368	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2519
BFO_2520	BFO_2520		BFO_2520	2554336	2555991	-	transporter%2C major facilitator family protein	identified by match to protein family HMM PF07690	gene	gene2369	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2520
BFO_2521	BFO_2521	folC	folC	2556012	2557322	-	bifunctional protein FolC	identified by match to protein family HMM PF08245%3B match to protein family HMM TIGR01499	gene	gene2370	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2521
BFO_2522	BFO_2522		BFO_2522	2557553	2558881	+	PhoH family protein	identified by match to protein family HMM PF02562	gene	gene2371	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2522
BFO_2523	BFO_2523		BFO_2523	2559818	2560504	-	queuosine biosynthesis protein QueC	identified by match to protein family HMM PF06508%3B match to protein family HMM TIGR00364	gene	gene2373	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2523
BFO_2524	BFO_2524		BFO_2524	2558916	2559821	+	cation diffusion facilitator family transporter	identified by match to protein family HMM PF01545%3B match to protein family HMM TIGR01297	gene	gene2372	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2524
BFO_2525	BFO_2525		BFO_2525	2560513	2561211	-	putative membrane protein	identified by match to protein family HMM PF02592%3B match to protein family HMM TIGR00697	gene	gene2374	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2525
BFO_2526	BFO_2526		BFO_2526	2561403	2561726	+	hypothetical protein	identified by match to protein family HMM PF05336	gene	gene2375	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2526
BFO_2527	BFO_2527		BFO_2527	2562161	2562382	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2376	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2527
BFO_2528	BFO_2528		BFO_2528	2562631	2563131	-		integrase family protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2377	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2528
BFO_2529	BFO_2529		BFO_2529	2563183	2563434	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2378	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2529
BFO_2530	BFO_2530		BFO_2530	2563479	2563598	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2379	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2530
BFO_2531	BFO_2531		BFO_2531	2563728	2563817	-	tRNA-Ser		tRNA	gene2380	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2531
BFO_2532	BFO_2532	dnaN	dnaN	2564067	2565191	+	DNA polymerase III%2C beta subunit	identified by match to protein family HMM PF00712%3B match to protein family HMM PF02767%3B match to protein family HMM PF02768%3B match to protein family HMM TIGR00663	gene	gene2381	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2532
BFO_2533	BFO_2533		BFO_2533	2565203	2565967	+	putative DNA polymerase III%2C epsilon subunit	identified by match to protein family HMM PF00929	gene	gene2382	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2533
BFO_2534	BFO_2534	coaBC	coaBC	2566017	2567222	+	phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase	identified by match to protein family HMM PF02441%3B match to protein family HMM PF04127%3B match to protein family HMM TIGR00521	gene	gene2383	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2534
BFO_2535	BFO_2535		BFO_2535	2567219	2568124	+	hypothetical protein		gene	gene2384	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2535
BFO_2536	BFO_2536	recN	recN	2568128	2569792	+	DNA repair protein RecN	identified by match to protein family HMM PF02463%3B match to protein family HMM TIGR00634	gene	gene2385	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2536
BFO_2537	BFO_2537		BFO_2537	2569803	2570555	+	RNA methyltransferase%2C TrmH family%2C group 3	identified by match to protein family HMM PF00588%3B match to protein family HMM PF08032%3B match to protein family HMM TIGR00186	gene	gene2386	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2537
BFO_2538	BFO_2538	rplT	rplT	2570771	2571118	-	ribosomal protein L20	identified by match to protein family HMM PF00453%3B match to protein family HMM TIGR01032	gene	gene2387	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2538
BFO_2539	BFO_2539	rpmI	rpmI	2571215	2571412	-	ribosomal protein L35	identified by match to protein family HMM PF01632%3B match to protein family HMM TIGR00001	gene	gene2388	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2539
BFO_2540	BFO_2540	infC	infC	2571477	2572091	-	translation initiation factor IF-3	identified by match to protein family HMM PF00707%3B match to protein family HMM PF05198%3B match to protein family HMM TIGR00168	gene	gene2389	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2540
BFO_2541	BFO_2541	thrS	thrS	2572138	2574096	-	threonine--tRNA ligase	identified by match to protein family HMM PF00587%3B match to protein family HMM PF02824%3B match to protein family HMM PF03129%3B match to protein family HMM PF07973%3B match to protein family HMM TIGR00418	gene	gene2390	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2541
BFO_2542	BFO_2542		BFO_2542	2574525	2576027	-	putative lipoprotein		gene	gene2391	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2542
BFO_2543	BFO_2543	pepD_2	pepD_2	2576077	2577534	-	Xaa-His dipeptidase	identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01893	gene	gene2392	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2543
BFO_2544	BFO_2544		BFO_2544	2577539	2577664	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2393	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2544
BFO_2545	BFO_2545		BFO_2545	2577717	2577905	+	hypothetical protein		gene	gene2394	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2545
BFO_2546	BFO_2546		BFO_2546	2577920	2578531	+	outer membrane protein	identified by match to protein family HMM PF03938	gene	gene2395	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2546
BFO_2547	BFO_2547	nagA	nagA	2578563	2579741	-	N-acetylglucosamine-6-phosphate deacetylase	identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969%3B match to protein family HMM TIGR00221	gene	gene2396	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2547
BFO_2548	BFO_2548		BFO_2548	2579772	2580956	-	putative NADH-dependent butanol dehydrogenase A	identified by match to protein family HMM PF00465	gene	gene2397	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2548
BFO_2549	BFO_2549		BFO_2549	2581115	2581858	-	cyclic nucleotide-binding domain protein	identified by match to protein family HMM PF00027	gene	gene2398	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2549
BFO_2550	BFO_2550		BFO_2550	2581883	2582068	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2399	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2550
BFO_2551	BFO_2551		BFO_2551	2583027	2583155	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2401	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2551
BFO_2552	BFO_2552		BFO_2552	2582149	2583030	+	hypothetical protein		gene	gene2400	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2552
BFO_2553	BFO_2553		BFO_2553	2583152	2585221	-	glycosyl hydrolase family 2%2C sugar binding domain protein	identified by match to protein family HMM PF00703%3B match to protein family HMM PF02836%3B match to protein family HMM PF02837	gene	gene2402	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2553
BFO_2554	BFO_2554		BFO_2554	2585277	2586065	-	HAD hydrolase%2C family IA%2C variant 3	identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509	gene	gene2403	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2554
BFO_2555	BFO_2555		BFO_2555	2586099	2586578	-	hypothetical protein		gene	gene2404	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2555
BFO_2556	BFO_2556	gldB	gldB	2586642	2587649	-	gliding motility-associated lipoprotein GldB	identified by match to protein family HMM TIGR03514	gene	gene2405	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2556
BFO_2557	BFO_2557		BFO_2557	2587650	2588774	-	putative DNA polymerase III%2C delta' subunit		gene	gene2406	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2557
BFO_2558	BFO_2558		BFO_2558	2588777	2589730	-	methylenetetrahydrofolate reductase (NAD(P)H)	identified by match to protein family HMM PF02219	gene	gene2407	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2558
BFO_2559	BFO_2559		BFO_2559	2589861	2590067	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2408	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2559
BFO_2560	BFO_2560		BFO_2560	2590074	2591417	-	MATE efflux family protein	identified by match to protein family HMM PF01554%3B match to protein family HMM PF01943%3B match to protein family HMM TIGR00797	gene	gene2409	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2560
BFO_2561	BFO_2561		BFO_2561	2591695	2591808	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2410	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2561
BFO_2562	BFO_2562		BFO_2562	2591967	2595155	+	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene2411	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2562
BFO_2563	BFO_2563		BFO_2563	2595169	2597178	+	SusD family protein	identified by match to protein family HMM PF07980	gene	gene2412	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2563
BFO_2564	BFO_2564		BFO_2564	2597189	2598388	-	hypothetical protein		gene	gene2413	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2564
BFO_2565	BFO_2565		BFO_2565	2598381	2599619	-	hypothetical protein		gene	gene2414	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2565
BFO_2566	BFO_2566		BFO_2566	2599616	2600713	-	UDP-N-acetylglucosamine 2-epimerase	identified by match to protein family HMM PF02350%3B match to protein family HMM TIGR00236	gene	gene2415	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2566
BFO_2567	BFO_2567		BFO_2567	2600734	2602026	-	hypothetical protein		gene	gene2416	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2567
BFO_2568	BFO_2568		BFO_2568	2602023	2602976	-	hypothetical protein		gene	gene2417	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2568
BFO_2569	BFO_2569	recA	recA	2602978	2603994	-	RecA protein	identified by match to protein family HMM PF00154%3B match to protein family HMM TIGR02012	gene	gene2418	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2569
BFO_2570	BFO_2570		BFO_2570	2604028	2604483	-	putative peroxiredoxin bcp	identified by match to protein family HMM PF00578%3B match to protein family HMM PF08534	gene	gene2419	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2570
BFO_2571	BFO_2571		BFO_2571	2604555	2605748	-	saccharopine dehydrogenase	identified by match to protein family HMM PF03435	gene	gene2420	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2571
BFO_2572	BFO_2572		BFO_2572	2605922	2606569	+	outer membrane lipoprotein carrier protein LolA	identified by match to protein family HMM PF03548	gene	gene2421	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2572
BFO_2573	BFO_2573		BFO_2573	2606547	2607116	+	putative lipoprotein		gene	gene2422	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2573
BFO_2574	BFO_2574		BFO_2574	2607106	2607477	+	hypothetical protein		gene	gene2423	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2574
BFO_2575	BFO_2575		BFO_2575	2607474	2608256	+	glycosyltransferase%2C group 2 family protein	identified by match to protein family HMM PF00535	gene	gene2424	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2575
BFO_2576	BFO_2576		BFO_2576	2608253	2611750	+	Acyltransferase	identified by match to protein family HMM PF01553	gene	gene2425	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2576
BFO_2577	BFO_2577		BFO_2577	2611825	2612178	-	hypothetical protein		gene	gene2426	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2577
BFO_2578	BFO_2578		BFO_2578	2612167	2613561	+	hypothetical protein		gene	gene2427	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2578
BFO_2579	BFO_2579		BFO_2579	2613558	2613905	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2428	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2579
BFO_2580	BFO_2580		BFO_2580	2614023	2614145	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2429	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2580
BFO_2581	BFO_2581		BFO_2581	2614105	2615340	+	hypothetical protein		gene	gene2430	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2581
BFO_2582	BFO_2582		BFO_2582	2615342	2615809	+	hypothetical protein		gene	gene2431	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2582
BFO_2583	BFO_2583		BFO_2583	2615908	2616846	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2432	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2583
BFO_2584	BFO_2584		BFO_2584	2616859	2617755	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2433	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2584
BFO_2585	BFO_2585		BFO_2585	2618081	2619202	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2434	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2585
BFO_2586	BFO_2586		BFO_2586	2619359	2619550	+	hypothetical protein		gene	gene2435	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2586
BFO_2587	BFO_2587		BFO_2587	2620082	2620339	+	hypothetical protein	identified by match to protein family HMM TIGR01643	gene	gene2436	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2587
BFO_2588	BFO_2588		BFO_2588	2620718	2621380	+		transposase%2C IS4 family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01609	pseudogene	gene2437	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2588
BFO_2589	BFO_2589		BFO_2589	2621577	2623391	+	RHS repeat-associated core domain protein	identified by match to protein family HMM PF05593%3B match to protein family HMM TIGR01643%3B match to protein family HMM TIGR03696	gene	gene2438	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2589
BFO_2590	BFO_2590		BFO_2590	2623395	2623955	+	hypothetical protein		gene	gene2439	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2590
BFO_2591	BFO_2591		BFO_2591	2624365	2624694	+	hypothetical protein		gene	gene2440	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2591
BFO_2592	BFO_2592		BFO_2592	2624699	2625253	+	hypothetical protein		gene	gene2441	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2592
BFO_2593	BFO_2593		BFO_2593	2625355	2625516	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2442	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2593
BFO_2594	BFO_2594		BFO_2594	2625513	2626292	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2443	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2594
BFO_2595	BFO_2595		BFO_2595	2626560	2626751	+		putative short chain dehydrogenase%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene2444	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2595
BFO_2596	BFO_2596		BFO_2596	2626845	2627948	+	hypothetical protein		gene	gene2445	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2596
BFO_2597	BFO_2597		BFO_2597	2628067	2628558	+	exonuclease	identified by match to protein family HMM PF00929	gene	gene2446	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2597
BFO_2598	BFO_2598		BFO_2598	2628596	2628709	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2447	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2598
BFO_2599	BFO_2599		BFO_2599	2628979	2629158	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2448	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2599
BFO_2600	BFO_2600		BFO_2600	2629182	2632211	+	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene2449	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2600
BFO_2601	BFO_2601		BFO_2601	2632234	2633868	+	SusD family protein	identified by match to protein family HMM PF07980	gene	gene2450	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2601
BFO_2602	BFO_2602		BFO_2602	2633868	2635415	+	hypothetical protein		gene	gene2451	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2602
BFO_2603	BFO_2603		BFO_2603	2635440	2636900	+	WD40-like protein	identified by match to protein family HMM PF07676	gene	gene2452	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2603
BFO_2605	BFO_2605		BFO_2605	2637399	2639597	+	TonB-dependent receptor plug domain protein	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715	gene	gene2453	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2605
BFO_2606	BFO_2606	alr	alr	2640283	2642757	-	alanine racemase	identified by match to protein family HMM PF00842%3B match to protein family HMM PF01168%3B match to protein family HMM PF01225%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR00492	gene	gene2455	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2606
BFO_2607	BFO_2607	pnuC	pnuC	2639669	2640295	+	nicotinamide mononucleotide transporter PnuC	identified by match to protein family HMM PF04973%3B match to protein family HMM TIGR01528	gene	gene2454	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2607
BFO_2608	BFO_2608		BFO_2608	2642760	2643752	-	GSCFA family protein	identified by match to protein family HMM PF08885	gene	gene2456	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2608
BFO_2609	BFO_2609		BFO_2609	2643868	2644053	+	hypothetical protein		gene	gene2457	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2609
BFO_2610	BFO_2610		BFO_2610	2644273	2645688	+	peptidase%2C M23 family	identified by match to protein family HMM PF01476%3B match to protein family HMM PF01551	gene	gene2458	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2610
BFO_2611	BFO_2611		BFO_2611	2645772	2646320	+	hypothetical protein	identified by match to protein family HMM PF07659	gene	gene2459	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2611
BFO_2612	BFO_2612		BFO_2612	2646412	2647584	+	hypothetical protein		gene	gene2460	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2612
BFO_2613	BFO_2613	tpiA	tpiA	2647597	2648352	+	triose-phosphate isomerase	identified by match to protein family HMM PF00121%3B match to protein family HMM TIGR00419	gene	gene2461	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2613
BFO_2614	BFO_2614		BFO_2614	2648385	2648861	+	sporulation and cell division repeat protein	identified by match to protein family HMM PF05036	gene	gene2462	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2614
BFO_2615	BFO_2615	folE	folE	2648864	2649445	+	GTP cyclohydrolase I	identified by match to protein family HMM PF01227%3B match to protein family HMM TIGR00063	gene	gene2463	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2615
BFO_2616	BFO_2616		BFO_2616	2649509	2650123	+	Sua5/YciO/YrdC/YwlC family protein	identified by match to protein family HMM PF01300%3B match to protein family HMM TIGR00057	gene	gene2464	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2616
BFO_2617	BFO_2617		BFO_2617	2650236	2650475	-	hypothetical protein		gene	gene2465	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2617
BFO_2618	BFO_2618		BFO_2618	2650529	2651134	-	RNA polymerase sigma-70 factor	identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937%3B match to protein family HMM TIGR02985	gene	gene2466	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2618
BFO_2619	BFO_2619		BFO_2619	2651449	2653089	+	peptidase%2C C69 family	identified by match to protein family HMM PF03577	gene	gene2467	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2619
BFO_2620	BFO_2620		BFO_2620	2653119	2653586	+	hypothetical protein		gene	gene2468	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2620
BFO_2621	BFO_2621		BFO_2621	2653752	2656394	-	TonB-dependent receptor	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715	gene	gene2470	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2621
BFO_2622	BFO_2622		BFO_2622	2653643	2653762	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2469	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2622
BFO_2623	BFO_2623		BFO_2623	2656626	2656970	-	hypothetical protein		gene	gene2471	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2623
BFO_2624	BFO_2624	fkpB_1	fkpB_1	2657086	2657832	+	peptidyl-prolyl cis-trans isomerase%2C FKBP-type	identified by match to protein family HMM PF00254%3B match to protein family HMM PF01346	gene	gene2472	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2624
BFO_2625	BFO_2625	fkpB_2	fkpB_2	2657865	2658581	+	peptidyl-prolyl cis-trans isomerase%2C FKBP-type	identified by match to protein family HMM PF00254%3B match to protein family HMM PF01346	gene	gene2473	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2625
BFO_2626	BFO_2626	mip	mip	2658596	2659333	+	outer membrane protein MIP	identified by match to protein family HMM PF00254%3B match to protein family HMM PF01346	gene	gene2474	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2626
BFO_2627	BFO_2627		BFO_2627	2659531	2660970	+	transglutaminase-like protein	identified by match to protein family HMM PF01841	gene	gene2475	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2627
BFO_2628	BFO_2628		BFO_2628	2661081	2661971	+	Tat pathway signal sequence domain protein	identified by match to protein family HMM PF01261%3B match to protein family HMM TIGR01409	gene	gene2476	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2628
BFO_2629	BFO_2629		BFO_2629	2662043	2662303	+	glutaredoxin	identified by match to protein family HMM PF00462	gene	gene2477	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2629
BFO_2630	BFO_2630		BFO_2630	2662469	2662993	-	hypothetical protein	identified by match to protein family HMM PF08984	gene	gene2479	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2630
BFO_2631	BFO_2631		BFO_2631	2662360	2662482	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2478	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2631
BFO_2632	BFO_2632		BFO_2632	2662980	2664215	-	hemerythrin HHE cation binding domain protein	identified by match to protein family HMM PF01814%3B match to protein family HMM PF04282	gene	gene2480	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2632
BFO_2633	BFO_2633		BFO_2633	2664272	2664601	-	cupin domain protein	identified by match to protein family HMM PF07883	gene	gene2481	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2633
BFO_2634	BFO_2634		BFO_2634	2664768	2666456	-	SusD family protein	identified by match to protein family HMM PF07980	gene	gene2482	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2634
BFO_2635	BFO_2635		BFO_2635	2666477	2669431	-	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene2483	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2635
BFO_2636	BFO_2636		BFO_2636	2669493	2669651	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2484	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2636
BFO_2637	BFO_2637		BFO_2637	2669683	2669805	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2485	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2637
BFO_2638	BFO_2638		BFO_2638	2669881	2670192	-	hypothetical protein		gene	gene2486	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2638
BFO_2639	BFO_2639		BFO_2639	2670207	2672519	-	TonB-dependent receptor	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715	gene	gene2487	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2639
BFO_2640	BFO_2640		BFO_2640	2672834	2673955	-	WD40-like protein	identified by match to protein family HMM PF07676	gene	gene2488	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2640
BFO_2641	BFO_2641		BFO_2641	2674084	2674200	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2489	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2641
BFO_2642	BFO_2642		BFO_2642	2674357	2675736	-	amidohydrolase family protein	identified by match to protein family HMM PF01979	gene	gene2490	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2642
BFO_2643	BFO_2643		BFO_2643	2675733	2676515	-	glycosyltransferase%2C group 2 family protein	identified by match to protein family HMM PF00535	gene	gene2491	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2643
BFO_2644	BFO_2644		BFO_2644	2676640	2678184	-	hypothetical protein	identified by match to protein family HMM PF02638	gene	gene2492	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2644
BFO_2645	BFO_2645		BFO_2645	2678228	2679271	-	NAD dependent epimerase/dehydratase family protein	identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993	gene	gene2493	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2645
BFO_2646	BFO_2646		BFO_2646	2679359	2679481	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2494	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2646
BFO_2647	BFO_2647		BFO_2647	2679523	2680185	-	hypothetical protein		gene	gene2495	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2647
BFO_2648	BFO_2648		BFO_2648	2680212	2682002	-	LysM domain protein	identified by match to protein family HMM PF01476	gene	gene2496	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2648
BFO_2649	BFO_2649		BFO_2649	2682020	2682157	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2497	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2649
BFO_2650	BFO_2650		BFO_2650	2682260	2682538	+		conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2498	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2650
BFO_2651	BFO_2651		BFO_2651	2682492	2683487	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2499	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2651
BFO_2652	BFO_2652		BFO_2652	2683487	2684461	+	transglycosylase SLT domain protein	identified by match to protein family HMM PF01464	gene	gene2500	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2652
BFO_2653	BFO_2653	uvrA_2	uvrA_2	2684494	2687367	+	excinuclease ABC%2C A subunit	identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR00630	gene	gene2501	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2653
BFO_2654	BFO_2654		BFO_2654	2687372	2687590	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2502	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2654
BFO_2655	BFO_2655		BFO_2655	2687631	2688266	+	YigZ family protein	identified by match to protein family HMM PF01205	gene	gene2503	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2655
BFO_2656	BFO_2656		BFO_2656	2688338	2688622	-	hypothetical protein		gene	gene2504	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2656
BFO_2657	BFO_2657		BFO_2657	2688732	2688863	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2505	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2657
BFO_2658	BFO_2658		BFO_2658	2688911	2690089	+	creatinase	identified by match to protein family HMM PF00557%3B match to protein family HMM PF01321	gene	gene2506	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2658
BFO_2659	BFO_2659		BFO_2659	2690146	2691777	+	alkaline phosphatase family protein	identified by match to protein family HMM PF00245	gene	gene2507	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2659
BFO_2660	BFO_2660		BFO_2660	2692285	2692431	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2508	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2660
BFO_2661	BFO_2661		BFO_2661	2692643	2694481	-	hypothetical protein		gene	gene2509	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2661
BFO_2662	BFO_2662		BFO_2662	2694484	2694861	-	putative lipoprotein		gene	gene2510	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2662
BFO_2663	BFO_2663		BFO_2663	2694860	2695003	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2511	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2663
BFO_2664	BFO_2664		BFO_2664	2695038	2695172	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2512	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2664
BFO_2665	BFO_2665		BFO_2665	2695837	2696838	-	hypothetical protein		gene	gene2513	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2665
BFO_2666	BFO_2666		BFO_2666	2697587	2698210	-		conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2514	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2666
BFO_2667	BFO_2667		BFO_2667	2698225	2698665	-	hypothetical protein		gene	gene2515	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2667
BFO_2668	BFO_2668		BFO_2668	2698819	2698932	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2516	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2668
BFO_2669	BFO_2669		BFO_2669	2699217	2699444	-	hypothetical protein		gene	gene2517	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2669
BFO_2670	BFO_2670		BFO_2670	2699691	2700761	-		transposase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01610	pseudogene	gene2518	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2670
BFO_2671	BFO_2671		BFO_2671	2701142	2701705	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2519	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2671
BFO_2672	BFO_2672		BFO_2672	2701814	2702314	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2520	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2672
BFO_2673	BFO_2673		BFO_2673	2702812	2703909	-		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene2521	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2673
BFO_2674	BFO_2674		BFO_2674	2703911	2704522	-	putative lipoprotein		gene	gene2522	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2674
BFO_2675	BFO_2675		BFO_2675	2705238	2707229	-	peptidase C13 family	identified by match to protein family HMM PF01650	gene	gene2523	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2675
BFO_2676	BFO_2676		BFO_2676	2707226	2707756	-	putative lipoprotein		gene	gene2524	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2676
BFO_2677	BFO_2677		BFO_2677	2707910	2708023	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2525	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2677
BFO_2678	BFO_2678		BFO_2678	2708280	2708420	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2526	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2678
BFO_2679	BFO_2679		BFO_2679	2708690	2710948	-	hypothetical protein		gene	gene2527	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2679
BFO_2680	BFO_2680		BFO_2680	2710945	2711370	-	putative lipoprotein		gene	gene2528	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2680
BFO_2681	BFO_2681		BFO_2681	2711522	2711635	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2529	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2681
BFO_2682	BFO_2682		BFO_2682	2711892	2712032	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2530	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2682
BFO_2683	BFO_2683		BFO_2683	2712302	2713522	-		matrixin%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00413	pseudogene	gene2531	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2683
BFO_2684	BFO_2684		BFO_2684	2713696	2714052	-	hypothetical protein		gene	gene2532	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2684
BFO_2685	BFO_2685		BFO_2685	2714246	2714407	+	hypothetical protein		gene	gene2533	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2685
BFO_2686	BFO_2686		BFO_2686	2715058	2718687	-	F5/8 type C domain protein	identified by match to protein family HMM PF00703%3B match to protein family HMM PF00754%3B match to protein family HMM PF02837	gene	gene2534	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2686
BFO_2687	BFO_2687		BFO_2687	2718714	2718827	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2535	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2687
BFO_2688	BFO_2688		BFO_2688	2718833	2719336	-	transcription termination/antitermination factor NusG	identified by match to protein family HMM PF02357	gene	gene2536	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2688
BFO_2689	BFO_2689		BFO_2689	2719333	2720814	-	hypothetical protein	identified by match to protein family HMM PF02638	gene	gene2537	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2689
BFO_2690	BFO_2690		BFO_2690	2720822	2721616	-	glycerophosphodiester phosphodiesterase family protein	identified by match to protein family HMM PF03009	gene	gene2538	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2690
BFO_2691	BFO_2691	trxB	trxB	2721618	2722556	-	thioredoxin-disulfide reductase	identified by match to protein family HMM PF00070%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01292	gene	gene2539	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2691
BFO_2692	BFO_2692		BFO_2692	2722598	2723242	-	hypothetical protein		gene	gene2540	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2692
BFO_2693	BFO_2693		BFO_2693	2723239	2725686	-	putative stage III sporulation protein E	identified by match to protein family HMM PF01580%3B match to protein family HMM PF09397	gene	gene2541	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2693
BFO_2694	BFO_2694	aspS	aspS	2725972	2727741	+	aspartate--tRNA ligase	identified by match to protein family HMM PF00152%3B match to protein family HMM PF01336%3B match to protein family HMM PF02938%3B match to protein family HMM TIGR00459	gene	gene2542	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2694
BFO_2695	BFO_2695		BFO_2695	2727756	2728853	+	dinuclear metal center protein%2C YbgI family	identified by match to protein family HMM PF01784%3B match to protein family HMM TIGR00486	gene	gene2543	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2695
BFO_2696	BFO_2696		BFO_2696	2728865	2729854	+	zinc ribbon domain protein	identified by match to protein family HMM PF02591	gene	gene2544	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2696
BFO_2697	BFO_2697	tilS	tilS	2729897	2731249	+	tRNA(Ile)-lysidine synthetase	identified by match to protein family HMM PF01171%3B match to protein family HMM TIGR02432%3B match to protein family HMM TIGR02433	gene	gene2545	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2697
BFO_2698	BFO_2698	rho	rho	2731455	2733449	+	transcription termination factor Rho	identified by match to protein family HMM PF00006%3B match to protein family HMM PF07497%3B match to protein family HMM PF07498%3B match to protein family HMM PF08206%3B match to protein family HMM TIGR00767	gene	gene2546	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2698
BFO_2699	BFO_2699		BFO_2699	2733579	2733707	+	hypothetical protein		gene	gene2547	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2699
BFO_2700	BFO_2700	ahpC	ahpC	2733711	2734277	+	peroxiredoxin	identified by match to protein family HMM PF00578%3B match to protein family HMM PF08534%3B match to protein family HMM TIGR03137	gene	gene2548	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2700
BFO_2701	BFO_2701		BFO_2701	2734509	2735201	+	hemerythrin HHE cation binding domain protein	identified by match to protein family HMM PF01814	gene	gene2549	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2701
BFO_2702	BFO_2702		BFO_2702	2735198	2735800	+	transcriptional regulator%2C LuxR family	identified by match to protein family HMM PF00196	gene	gene2550	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2702
BFO_2703	BFO_2703		BFO_2703	2735778	2735894	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2551	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2703
BFO_2704	BFO_2704		BFO_2704	2736063	2736233	+	hypothetical protein		gene	gene2552	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2704
BFO_2705	BFO_2705		BFO_2705	2736300	2737067	+	hypothetical protein	identified by match to protein family HMM PF06738	gene	gene2553	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2705
BFO_2706	BFO_2706		BFO_2706	2737072	2737557	+	hypothetical protein		gene	gene2554	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2706
BFO_2707	BFO_2707		BFO_2707	2737561	2738289	+	putative membrane protein		gene	gene2555	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2707
BFO_2708	BFO_2708		BFO_2708	2738427	2738558	-	hypothetical protein		gene	gene2556	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2708
BFO_2709	BFO_2709		BFO_2709	2738726	2740306	-	putative lipoprotein		gene	gene2557	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2709
BFO_2710	BFO_2710		BFO_2710	2740390	2740512	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2558	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2710
BFO_2711	BFO_2711		BFO_2711	2740579	2741010	-	putative lipoprotein		gene	gene2559	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2711
BFO_2712	BFO_2712		BFO_2712	2741563	2743467	-	putative pyruvate carboxylase subunit B	identified by match to protein family HMM PF00364%3B match to protein family HMM PF00682%3B match to protein family HMM PF02436	gene	gene2560	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2712
BFO_2713	BFO_2713		BFO_2713	2743711	2745270	-	transporter%2C lactate permease family	identified by match to protein family HMM PF02652%3B match to protein family HMM TIGR00795	gene	gene2561	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2713
BFO_2714	BFO_2714		BFO_2714	2745313	2745894	-	hypothetical protein	identified by match to protein family HMM PF02589	gene	gene2562	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2714
BFO_2715	BFO_2715		BFO_2715	2745891	2747282	-	putative iron-sulfur cluster-binding protein		gene	gene2563	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2715
BFO_2716	BFO_2716		BFO_2716	2747279	2748022	-	cysteine-rich domain protein	identified by match to protein family HMM PF02754	gene	gene2564	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2716
BFO_2717	BFO_2717		BFO_2717	2748070	2749359	-	hypothetical protein		gene	gene2565	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2717
BFO_2718	BFO_2718		BFO_2718	2749638	2749751	-	hypothetical protein		gene	gene2566	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2718
BFO_2719	BFO_2719		BFO_2719	2749813	2750349	+	hydrolase%2C NUDIX family	identified by match to protein family HMM PF00293%3B match to protein family HMM PF09297	gene	gene2567	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2719
BFO_2720	BFO_2720		BFO_2720	2750405	2750830	+	ACT domain protein	identified by match to protein family HMM PF01842	gene	gene2568	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2720
BFO_2721	BFO_2721	yfiO	yfiO	2750877	2751704	+	outer membrane assembly lipoprotein YfiO	identified by match to protein family HMM TIGR03302	gene	gene2569	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2721
BFO_2722	BFO_2722		BFO_2722	2751730	2752068	+	hypothetical protein		gene	gene2570	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2722
BFO_2723	BFO_2723		BFO_2723	2752068	2752529	+	hypothetical protein		gene	gene2571	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2723
BFO_2724	BFO_2724	mtgA	mtgA	2752543	2753385	+	monofunctional biosynthetic peptidoglycan transglycosylase	identified by match to protein family HMM PF00912%3B match to protein family HMM TIGR02070	gene	gene2572	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2724
BFO_2725	BFO_2725	lipB	lipB	2753382	2754065	+	lipoyl(octanoyl) transferase	identified by match to protein family HMM PF03099%3B match to protein family HMM TIGR00214	gene	gene2573	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2725
BFO_2726	BFO_2726	gldH	gldH	2754072	2754542	-	gliding motility-associated lipoprotein GldH	identified by match to protein family HMM TIGR03511	gene	gene2574	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2726
BFO_2727	BFO_2727		BFO_2727	2754535	2755890	-	PSP1 C-terminal domain protein	identified by match to protein family HMM PF04468	gene	gene2575	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2727
BFO_2728	BFO_2728		BFO_2728	2755900	2757087	-	putative 8-amino-7-oxononanoate synthase	identified by match to protein family HMM PF00155%3B match to protein family HMM PF00202	gene	gene2576	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2728
BFO_2729	BFO_2729		BFO_2729	2757212	2757973	-	methyltransferase small domain protein	identified by match to protein family HMM PF05175	gene	gene2577	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2729
BFO_2730	BFO_2730		BFO_2730	2758030	2758575	-	hypothetical protein		gene	gene2578	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2730
BFO_2731	BFO_2731		BFO_2731	2758732	2760090	+	peptidase dimerization domain protein	identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687	gene	gene2579	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2731
BFO_2732	BFO_2732		BFO_2732	2760087	2761349	+	amidohydrolase family protein	identified by match to protein family HMM PF01979	gene	gene2580	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2732
BFO_2733	BFO_2733		BFO_2733	2761429	2762010	-	hypothetical protein		gene	gene2581	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2733
BFO_2734	BFO_2734		BFO_2734	2762163	2763077	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2582	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2734
BFO_2735	BFO_2735		BFO_2735	2763200	2763547	+		hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene2583	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2735
BFO_2736	BFO_2736		BFO_2736	2763548	2764015	+		conserved domain protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene2584	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2736
BFO_2737	BFO_2737		BFO_2737	2764319	2765659	+	Alpha-L-fucosidase	identified by match to protein family HMM PF01120	gene	gene2585	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2737
BFO_2738	BFO_2738		BFO_2738	2765747	2766916	+	proline dehydrogenase	identified by match to protein family HMM PF01619	gene	gene2586	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2738
BFO_2739	BFO_2739		BFO_2739	2766918	2767502	+	hypothetical protein		gene	gene2587	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2739
BFO_2740	BFO_2740		BFO_2740	2767800	2767889	+	tRNA-Ser		tRNA	gene2588	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2740
BFO_2741	BFO_2741		BFO_2741	2768056	2768193	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2589	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2741
BFO_2742	BFO_2742		BFO_2742	2768193	2768306	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2590	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2742
BFO_2743	BFO_2743		BFO_2743	2768335	2771343	+	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene2591	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2743
BFO_2744	BFO_2744		BFO_2744	2771367	2772926	+	SusD family protein	identified by match to protein family HMM PF07980	gene	gene2592	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2744
BFO_2745	BFO_2745		BFO_2745	2773062	2774111	+	sporulation and cell division repeat protein	identified by match to protein family HMM PF05036	gene	gene2593	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2745
BFO_2746	BFO_2746	mutA	mutA	2774182	2776089	+	methylmalonyl-CoA mutase%2C small subunit	identified by match to protein family HMM PF01642%3B match to protein family HMM TIGR00642	gene	gene2594	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2746
BFO_2747	BFO_2747		BFO_2747	2776107	2778254	+	methylmalonyl-CoA mutase	identified by match to protein family HMM PF01642%3B match to protein family HMM PF02310%3B match to protein family HMM TIGR00640%3B match to protein family HMM TIGR00641	gene	gene2595	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2747
BFO_2748	BFO_2748		BFO_2748	2778221	2778343	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2596	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2748
BFO_2749	BFO_2749		BFO_2749	2778388	2780448	+	prevent-host-death family protein	identified by match to protein family HMM PF00005	gene	gene2597	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2749
BFO_2750	BFO_2750		BFO_2750	2780473	2780688	-	hypothetical protein		gene	gene2598	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2750
BFO_2751	BFO_2751	kdsB	kdsB	2780826	2781584	-	3-deoxy-D-manno-octulosonate cytidylyltransferase	identified by match to protein family HMM PF02348%3B match to protein family HMM TIGR00466	gene	gene2599	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2751
BFO_2752	BFO_2752		BFO_2752	2781652	2783598	-	membrane protein insertase%2C YidC/Oxa1 family	identified by match to protein family HMM PF02096%3B match to protein family HMM TIGR03592%3B match to protein family HMM TIGR03593	gene	gene2600	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2752
BFO_2753	BFO_2753	pyrG	pyrG	2783641	2785245	-	CTP synthase	identified by match to protein family HMM PF00117%3B match to protein family HMM PF06418%3B match to protein family HMM TIGR00337	gene	gene2601	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2753
BFO_2754	BFO_2754		BFO_2754	2785477	2787282	-	MutS domain V protein	identified by match to protein family HMM PF00488	gene	gene2602	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2754
BFO_2755	BFO_2755		BFO_2755	2787505	2789049	+	hypothetical protein		gene	gene2603	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2755
BFO_2756	BFO_2756		BFO_2756	2789069	2789227	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2604	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2756
BFO_2757	BFO_2757		BFO_2757	2789221	2789667	+	positive regulator of sigma(E)%2C RseC/MucC	identified by match to protein family HMM PF04246	gene	gene2605	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2757
BFO_2758	BFO_2758	rnfB	rnfB	2789667	2790572	+	electron transport complex%2C RnfABCDGE type%2C B subunit	identified by match to protein family HMM PF00037%3B match to protein family HMM PF04060	gene	gene2606	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2758
BFO_2759	BFO_2759	rnfC	rnfC	2790582	2791910	+	electron transport complex%2C RnfABCDGE type%2C C subunit	identified by match to protein family HMM PF01512%3B match to protein family HMM TIGR01945	gene	gene2607	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2759
BFO_2760	BFO_2760		BFO_2760	2791953	2792909	+	putative electron transport complex protein RnfD	identified by match to protein family HMM PF03116%3B match to protein family HMM TIGR01946	gene	gene2608	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2760
BFO_2761	BFO_2761	rnfG	rnfG	2792912	2793535	+	electron transport complex%2C RnfABCDGE type%2C G subunit	identified by match to protein family HMM PF04205%3B match to protein family HMM TIGR01947	gene	gene2609	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2761
BFO_2762	BFO_2762	rnfE	rnfE	2793568	2794149	+	electron transport complex%2C RnfABCDGE type%2C E subunit	identified by match to protein family HMM PF02508%3B match to protein family HMM TIGR01948	gene	gene2610	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2762
BFO_2763	BFO_2763		BFO_2763	2794167	2794739	+	putative NADH:ubiquinone oxidoreductase%2C E subunit	identified by match to protein family HMM PF02508%3B match to protein family HMM TIGR01943	gene	gene2611	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2763
BFO_2764	BFO_2764		BFO_2764	2794768	2795262	-	hypothetical protein		gene	gene2612	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2764
BFO_2765	BFO_2765		BFO_2765	2795498	2795797	-	hypothetical protein		gene	gene2614	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2765
BFO_2766	BFO_2766		BFO_2766	2795314	2795517	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2613	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2766
BFO_2767	BFO_2767		BFO_2767	2795839	2795952	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2615	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2767
BFO_2768	BFO_2768		BFO_2768	2796186	2797427	-	transposase	identified by match to protein family HMM PF01610	gene	gene2616	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2768
BFO_2769	BFO_2769		BFO_2769	2797634	2797762	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2617	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2769
BFO_2770	BFO_2770		BFO_2770	2797698	2798402	+	peptidase%2C S54 family	identified by match to protein family HMM PF01694%3B overlaps another CDS with the same product name	gene	gene2618	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2770
BFO_2771	BFO_2771		BFO_2771	2798383	2799267	+	peptidase%2C S54 family	identified by match to protein family HMM PF01694%3B overlaps another CDS with the same product name	gene	gene2619	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2771
BFO_2772	BFO_2772		BFO_2772	2799270	2800364	+	endonuclease/exonuclease/phosphatase family protein	identified by match to protein family HMM PF03372	gene	gene2620	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2772
BFO_2773	BFO_2773	pbuG	pbuG	2800382	2801671	-	guanine/hypoxanthine permease PbuG	identified by match to protein family HMM PF00860	gene	gene2621	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2773
BFO_2774	BFO_2774		BFO_2774	2801698	2802390	-	hypothetical protein		gene	gene2622	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2774
BFO_2775	BFO_2775		BFO_2775	2802394	2803185	-	glycosyl hydrolase family 16	identified by match to protein family HMM PF00722	gene	gene2623	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2775
BFO_2776	BFO_2776		BFO_2776	2803197	2803424	-	hypothetical protein		gene	gene2624	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2776
BFO_2777	BFO_2777		BFO_2777	2803438	2805018	-	arylsulfatase	identified by match to protein family HMM PF00884	gene	gene2625	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2777
BFO_2778	BFO_2778		BFO_2778	2805085	2805237	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2626	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2778
BFO_2779	BFO_2779		BFO_2779	2805288	2805863	+	ATP:cob(I)alamin adenosyltransferase	identified by match to protein family HMM PF01923%3B match to protein family HMM TIGR00636	gene	gene2627	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2779
BFO_2780	BFO_2780	cobJ	cobJ	2805898	2807316	+	precorrin-3B C(17)-methyltransferase	identified by match to protein family HMM PF00590%3B match to protein family HMM PF02570%3B match to protein family HMM TIGR01466	gene	gene2628	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2780
BFO_2781	BFO_2781	cbiE	cbiE	2807331	2808512	+	precorrin-6y C5%2C15-methyltransferase (decarboxylating)%2C CbiE subunit	identified by match to protein family HMM TIGR02467%3B match to protein family HMM TIGR02469	gene	gene2629	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2781
BFO_2782	BFO_2782	cobM	cobM	2808509	2810329	+	precorrin-4 C(11)-methyltransferase	identified by match to protein family HMM PF00590%3B match to protein family HMM PF01890%3B match to protein family HMM TIGR01465	gene	gene2630	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2782
BFO_2783	BFO_2783	cbiD	cbiD	2810326	2812134	+	cobalamin biosynthesis protein CbiD	identified by match to protein family HMM PF01888%3B match to protein family HMM TIGR00312	gene	gene2631	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2783
BFO_2784	BFO_2784		BFO_2784	2812292	2814193	+	hypothetical protein		gene	gene2632	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2784
BFO_2785	BFO_2785		BFO_2785	2814234	2814764	+	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2633	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2785
BFO_2786	BFO_2786		BFO_2786	2814852	2814989	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2634	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2786
BFO_2787	BFO_2787		BFO_2787	2815042	2815158	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2635	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2787
BFO_2788	BFO_2788		BFO_2788	2815548	2815736	-	putative lipoprotein		gene	gene2636	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2788
BFO_2789	BFO_2789		BFO_2789	2815811	2816104	-	hypothetical protein		gene	gene2637	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2789
BFO_2790	BFO_2790		BFO_2790	2816108	2819275	-	RND transporter%2C Hydrophobe/Amphiphile Efflux-1 (HAE1)/Heavy Metal Efflux (HME) family%2C permease protein	identified by match to protein family HMM PF00873	gene	gene2638	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2790
BFO_2791	BFO_2791		BFO_2791	2819342	2820376	-	efflux transporter%2C RND family%2C MFP subunit	identified by match to protein family HMM TIGR01730	gene	gene2639	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2791
BFO_2792	BFO_2792		BFO_2792	2820399	2821880	-	outer membrane efflux protein	identified by match to protein family HMM PF02321	gene	gene2640	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2792
BFO_2793	BFO_2793		BFO_2793	2822027	2823046	+	transcriptional regulator%2C AraC family	identified by match to protein family HMM PF00165	gene	gene2641	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2793
BFO_2794	BFO_2794		BFO_2794	2823239	2823685	-	hypothetical protein		gene	gene2642	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2794
BFO_2795	BFO_2795		BFO_2795	2823744	2825303	-	amino acid/peptide transporter	identified by match to protein family HMM PF00854%3B match to protein family HMM PF07690%3B match to protein family HMM TIGR00924	gene	gene2643	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2795
BFO_2796	BFO_2796		BFO_2796	2825358	2826488	-	hypothetical protein		gene	gene2644	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2796
BFO_2797	BFO_2797	argF'	argF'	2826845	2827807	-	N-acetylornithine carbamoyltransferase	identified by match to protein family HMM PF00185%3B match to protein family HMM PF02729	gene	gene2646	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2797
BFO_2798	BFO_2798		BFO_2798	2826531	2826848	+	hypothetical protein		gene	gene2645	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2798
BFO_2799	BFO_2799		BFO_2799	2828032	2828979	+	sigma factor regulatory protein%2C FecR/PupR family	identified by match to protein family HMM PF04773	gene	gene2647	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2799
BFO_2800	BFO_2800		BFO_2800	2828984	2829103	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2648	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2800
BFO_2801	BFO_2801		BFO_2801	2829102	2832320	+	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07660%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene2649	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2801
BFO_2802	BFO_2802		BFO_2802	2832401	2834077	+	SusD family protein	identified by match to protein family HMM PF07980	gene	gene2650	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2802
BFO_2803	BFO_2803		BFO_2803	2834126	2835607	+	O-Glycosyl hydrolase family 30	identified by match to protein family HMM PF02055	gene	gene2651	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2803
BFO_2804	BFO_2804		BFO_2804	2835648	2835803	-	hypothetical protein		gene	gene2652	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2804
BFO_2805	BFO_2805		BFO_2805	2836135	2836845	+	hydrolase%2C NUDIX family	identified by match to protein family HMM PF00293	gene	gene2653	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2805
BFO_2806	BFO_2806		BFO_2806	2836899	2838395	+	carbohydrate kinase%2C FGGY family protein	identified by match to protein family HMM PF00370%3B match to protein family HMM PF02782	gene	gene2654	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2806
BFO_2807	BFO_2807	xylA	xylA	2838435	2839751	+	xylose isomerase	identified by match to protein family HMM PF01261%3B match to protein family HMM TIGR02630	gene	gene2655	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2807
BFO_2808	BFO_2808		BFO_2808	2839791	2841290	+	MFS transporter%2C SP family	identified by match to protein family HMM PF00083%3B match to protein family HMM PF07690%3B match to protein family HMM TIGR00879	gene	gene2656	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2808
BFO_2809	BFO_2809		BFO_2809	2841832	2842125	+		conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2657	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2809
BFO_2810	BFO_2810		BFO_2810	2842125	2842310	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2658	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2810
BFO_2811	BFO_2811		BFO_2811	2842315	2842434	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2659	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2811
BFO_2812	BFO_2812		BFO_2812	2842433	2845822	+	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07660%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene2660	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2812
BFO_2813	BFO_2813		BFO_2813	2845835	2847481	+	SusD family protein	identified by match to protein family HMM PF07980	gene	gene2661	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2813
BFO_2814	BFO_2814		BFO_2814	2847472	2849127	+	hypothetical protein		gene	gene2662	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2814
BFO_2815	BFO_2815		BFO_2815	2849160	2850575	+	hypothetical protein	identified by match to protein family HMM PF02638	gene	gene2663	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2815
BFO_2816	BFO_2816		BFO_2816	2850630	2852090	+	Ser/Thr phosphatase family protein	identified by match to protein family HMM PF00149	gene	gene2664	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2816
BFO_2817	BFO_2817		BFO_2817	2852110	2852322	+	hypothetical protein		gene	gene2665	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2817
BFO_2818	BFO_2818		BFO_2818	2852353	2853660	-	peptidase C10 family		gene	gene2666	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2818
BFO_2819	BFO_2819		BFO_2819	2853685	2854173	-	putative lipoprotein		gene	gene2667	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2819
BFO_2820	BFO_2820		BFO_2820	2854224	2854346	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2668	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2820
BFO_2821	BFO_2821		BFO_2821	2854552	2854830	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2669	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2821
BFO_2822	BFO_2822		BFO_2822	2854986	2855144	+		hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene2670	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2822
BFO_2823	BFO_2823		BFO_2823	2855247	2855582	+	toxin-antitoxin system%2C antitoxin component%2C HicB family	identified by match to protein family HMM PF05534	gene	gene2671	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2823
BFO_2824	BFO_2824		BFO_2824	2855622	2855741	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2672	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2824
BFO_2825	BFO_2825		BFO_2825	2855769	2855844	-	tRNA-Gly		tRNA	gene2673	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2825
BFO_2826	BFO_2826	argB	argB	2855918	2856685	+	acetylglutamate kinase	identified by match to protein family HMM PF00696%3B match to protein family HMM TIGR00761	gene	gene2674	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2826
BFO_2827	BFO_2827		BFO_2827	2856728	2858521	-		radical SAM protein YgiQ%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF04055%3B match to protein family HMM PF08497%3B match to protein family HMM TIGR03904	pseudogene	gene2675	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2827
BFO_2828	BFO_2828	ispE	ispE	2858518	2859321	-	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	identified by match to protein family HMM PF00288%3B match to protein family HMM TIGR00154	gene	gene2676	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2828
BFO_2829	BFO_2829		BFO_2829	2859326	2860639	-	putative DEAD-box ATP-dependent RNA helicase CshA	identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271	gene	gene2677	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2829
BFO_2830	BFO_2830		BFO_2830	2860653	2861699	-	hypothetical protein		gene	gene2678	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2830
BFO_2831	BFO_2831		BFO_2831	2861703	2863805	-	hypothetical protein		gene	gene2679	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2831
BFO_2832	BFO_2832		BFO_2832	2863874	2864416	-	2-oxoacid:ferredoxin/flavodoxin oxidoreductase%2C gamma subunit	identified by match to protein family HMM PF01558	gene	gene2680	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2832
BFO_2833	BFO_2833		BFO_2833	2864437	2865198	-	thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain protein	identified by match to protein family HMM PF02775	gene	gene2681	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2833
BFO_2834	BFO_2834		BFO_2834	2865221	2865394	-	hypothetical protein		gene	gene2682	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2834
BFO_2835	BFO_2835		BFO_2835	2865406	2866482	-	3-methyl-2-oxobutanoate dehydrogenase (ferredoxin)	identified by match to protein family HMM PF01855%3B match to protein family HMM PF02780	gene	gene2683	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2835
BFO_2836	BFO_2836		BFO_2836	2866487	2866717	-	photosystem I iron-sulfur center family protein	identified by match to protein family HMM PF00037	gene	gene2684	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2836
BFO_2837	BFO_2837		BFO_2837	2866777	2867172	-	hypothetical protein		gene	gene2685	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2837
BFO_2838	BFO_2838		BFO_2838	2867239	2867793	-	Interferon-induced transmembrane protein	identified by match to protein family HMM PF04505	gene	gene2686	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2838
BFO_2839	BFO_2839		BFO_2839	2867979	2868911	-	putative membrane protein	identified by match to protein family HMM PF04018	gene	gene2687	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2839
BFO_2840	BFO_2840		BFO_2840	2868916	2870025	-	tetratricopeptide repeat protein	identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719	gene	gene2688	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2840
BFO_2841	BFO_2841	glnS	glnS	2870065	2871777	-	glutamine--tRNA ligase	identified by match to protein family HMM PF00749%3B match to protein family HMM PF03950%3B match to protein family HMM TIGR00440	gene	gene2689	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2841
BFO_2842	BFO_2842	thiL	thiL	2871995	2873032	-	thiamine-phosphate kinase	identified by match to protein family HMM PF02769%3B match to protein family HMM TIGR01379	gene	gene2691	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2842
BFO_2843	BFO_2843		BFO_2843	2871871	2872014	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2690	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2843
BFO_2844	BFO_2844	lpxK	lpxK	2873047	2874147	-	tetraacyldisaccharide 4'-kinase	identified by match to protein family HMM PF02606%3B match to protein family HMM TIGR00682	gene	gene2692	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2844
BFO_2845	BFO_2845	sppA	sppA	2874166	2875926	-	signal peptide peptidase SppA%2C 67K type	identified by match to protein family HMM PF01343%3B match to protein family HMM TIGR00705%3B match to protein family HMM TIGR00706	gene	gene2693	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2845
BFO_2846	BFO_2846		BFO_2846	2875936	2876094	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2694	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2846
BFO_2847	BFO_2847		BFO_2847	2876118	2876231	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2695	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2847
BFO_2848	BFO_2848		BFO_2848	2876210	2877553	+	MATE efflux family protein	identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797	gene	gene2696	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2848
BFO_2849	BFO_2849		BFO_2849	2877560	2877724	-	hypothetical protein		gene	gene2697	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2849
BFO_2850	BFO_2850		BFO_2850	2877838	2877951	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2698	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2850
BFO_2851	BFO_2851		BFO_2851	2877967	2880168	-	peptidase%2C S9A/B/C family%2C catalytic domain protein	identified by match to protein family HMM PF00326%3B match to protein family HMM PF02897	gene	gene2699	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2851
BFO_2852	BFO_2852		BFO_2852	2880243	2880640	+			tmRNA	gene2700	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2852
BFO_2853	BFO_2853		BFO_2853	2880652	2882997	-	response regulator receiver domain protein	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00165%3B match to protein family HMM PF00512%3B match to protein family HMM PF02518	gene	gene2701	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2853
BFO_2854	BFO_2854		BFO_2854	2884367	2885056	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2703	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2854
BFO_2855	BFO_2855		BFO_2855	2883074	2884414	+	transposase%2C IS4 family	identified by match to protein family HMM PF01609	gene	gene2702	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2855
BFO_2856	BFO_2856		BFO_2856	2885147	2885407	-	hypothetical protein		gene	gene2704	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2856
BFO_2857	BFO_2857		BFO_2857	2885424	2885690	+	hypothetical protein		gene	gene2705	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2857
BFO_2858	BFO_2858		BFO_2858	2885807	2886145	+	hypothetical protein		gene	gene2706	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2858
BFO_2859	BFO_2859		BFO_2859	2886235	2887740	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2707	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2859
BFO_2860	BFO_2860		BFO_2860	2888102	2889922	+	bacterial group 2 Ig-like protein	identified by match to protein family HMM PF00041%3B match to protein family HMM PF02368	gene	gene2708	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2860
BFO_2861	BFO_2861		BFO_2861	2890215	2891390	+	bacterial group 2 Ig-like protein	identified by match to protein family HMM PF02368	gene	gene2709	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2861
BFO_2862	BFO_2862		BFO_2862	2891443	2895057	+	bacterial group 2 Ig-like protein	identified by match to protein family HMM PF00041%3B match to protein family HMM PF02368	gene	gene2710	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2862
BFO_2863	BFO_2863		BFO_2863	2895189	2895356	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2711	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2863
BFO_2864	BFO_2864		BFO_2864	2895584	2896717	+	bacterial group 2 Ig-like protein	identified by match to protein family HMM PF02368	gene	gene2712	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2864
BFO_2865	BFO_2865		BFO_2865	2896771	2900079	+	bacterial group 2 Ig-like protein	identified by match to protein family HMM PF00041%3B match to protein family HMM PF02368	gene	gene2713	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2865
BFO_2866	BFO_2866		BFO_2866	2900391	2900519	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2714	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2866
BFO_2867	BFO_2867	gcvP	gcvP	2900546	2903398	-	glycine dehydrogenase	identified by match to protein family HMM PF02347%3B match to protein family HMM TIGR00461	gene	gene2715	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2867
BFO_2868	BFO_2868		BFO_2868	2903416	2904054	-	metallo-beta-lactamase domain protein	identified by match to protein family HMM PF00753	gene	gene2716	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2868
BFO_2869	BFO_2869	rmsG	rmsG	2904051	2904671	-	16S rRNA (guanine(527)-N(7))-methyltransferase	identified by match to protein family HMM PF02527%3B match to protein family HMM TIGR00138	gene	gene2717	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2869
BFO_2870	BFO_2870		BFO_2870	2904675	2905523	-	putative lipoprotein		gene	gene2718	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2870
BFO_2871	BFO_2871		BFO_2871	2905574	2905705	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2719	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2871
BFO_2872	BFO_2872	gyrA	gyrA	2905826	2908393	+	DNA gyrase%2C A subunit	identified by match to protein family HMM PF00521%3B match to protein family HMM PF03989%3B match to protein family HMM TIGR01063	gene	gene2720	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2872
BFO_2873	BFO_2873		BFO_2873	2908436	2909638	+	tetratricopeptide repeat protein	identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719	gene	gene2721	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2873
BFO_2874	BFO_2874		BFO_2874	2909749	2910876	-	universal stress family protein	identified by match to protein family HMM PF00582	gene	gene2722	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2874
BFO_2875	BFO_2875		BFO_2875	2910879	2911142	-	hypothetical protein		gene	gene2723	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2875
BFO_2876	BFO_2876		BFO_2876	2911279	2911986	-	PAP2 family protein	identified by match to protein family HMM PF01569	gene	gene2724	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2876
BFO_2877	BFO_2877		BFO_2877	2911993	2912757	-	tetratricopeptide repeat protein	identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719%3B match to protein family HMM PF08239	gene	gene2725	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2877
BFO_2878	BFO_2878	batD	batD	2912757	2914604	-	BatD protein		gene	gene2726	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2878
BFO_2879	BFO_2879		BFO_2879	2914598	2915332	-	tetratricopeptide repeat protein	identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719	gene	gene2727	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2879
BFO_2880	BFO_2880		BFO_2880	2915343	2916362	-	von Willebrand factor type A domain protein	identified by match to protein family HMM PF00092	gene	gene2728	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2880
BFO_2881	BFO_2881		BFO_2881	2916378	2917367	-	von Willebrand factor type A domain protein	identified by match to protein family HMM PF00092	gene	gene2729	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2881
BFO_2882	BFO_2882		BFO_2882	2917364	2918404	-	hypothetical protein		gene	gene2730	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2882
BFO_2883	BFO_2883		BFO_2883	2918411	2919280	-	hypothetical protein		gene	gene2731	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2883
BFO_2884	BFO_2884		BFO_2884	2919310	2920305	-	ATPase%2C AAA family	identified by match to protein family HMM PF07726%3B match to protein family HMM PF07728	gene	gene2732	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2884
BFO_2885	BFO_2885	hup_1	hup_1	2920459	2921850	-	DNA-binding protein HU	identified by match to protein family HMM PF00216%3B overlaps another CDS with the same product name	gene	gene2733	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2885
BFO_2886	BFO_2886	hup_2	hup_2	2921843	2922133	-	DNA-binding protein HU	identified by match to protein family HMM PF00216%3B overlaps another CDS with the same product name	gene	gene2734	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2886
BFO_2887	BFO_2887	rimO	rimO	2922214	2923509	-	ribosomal protein S12 methylthiotransferase RimO	identified by match to protein family HMM PF00919%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR00089%3B match to protein family HMM TIGR01125	gene	gene2735	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2887
BFO_2888	BFO_2888	ftsY	ftsY	2923490	2924461	-	signal recognition particle-docking protein FtsY	identified by match to protein family HMM PF00448%3B match to protein family HMM PF02881%3B match to protein family HMM TIGR00064	gene	gene2736	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2888
BFO_2889	BFO_2889		BFO_2889	2924814	2925971	+	hypothetical protein		gene	gene2737	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2889
BFO_2890	BFO_2890		BFO_2890	2926060	2926182	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2738	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2890
BFO_2891	BFO_2891		BFO_2891	2926501	2927076	-	hypothetical protein		gene	gene2739	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2891
BFO_2892	BFO_2892		BFO_2892	2927187	2927318	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2740	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2892
BFO_2893	BFO_2893		BFO_2893	2927315	2928355	+	YceG family protein	identified by match to protein family HMM PF02618%3B match to protein family HMM TIGR00247	gene	gene2741	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2893
BFO_2894	BFO_2894		BFO_2894	2928427	2930019	+	putative indolepyruvate ferredoxin oxidoreductase%2C alpha subunit	identified by match to protein family HMM PF02775	gene	gene2742	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2894
BFO_2895	BFO_2895		BFO_2895	2930021	2930599	+	putative indolepyruvate ferredoxin oxidoreductase%2C beta subunit	identified by match to protein family HMM PF01558	gene	gene2743	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2895
BFO_2896	BFO_2896		BFO_2896	2930778	2931041	-	hypothetical protein		gene	gene2744	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2896
BFO_2897	BFO_2897		BFO_2897	2931624	2931770	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2745	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2897
BFO_2898	BFO_2898	holA	holA	2932045	2933070	-	DNA polymerase III%2C delta subunit	identified by match to protein family HMM PF06144%3B match to protein family HMM TIGR01128	gene	gene2746	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2898
BFO_2899	BFO_2899		BFO_2899	2933082	2933906	-	putative AMP nucleosidase	identified by match to protein family HMM PF01048%3B match to protein family HMM TIGR01721	gene	gene2747	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2899
BFO_2900	BFO_2900		BFO_2900	2933906	2934367	+	type I restriction enzyme R protein%2C N-terminal domain protein	identified by match to protein family HMM PF04313	gene	gene2748	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2900
BFO_2901	BFO_2901		BFO_2901	2934417	2935154	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2749	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2901
BFO_2902	BFO_2902		BFO_2902	2935270	2936154	-	hypothetical protein		gene	gene2750	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2902
BFO_2903	BFO_2903		BFO_2903	2936234	2937808	-	putative ribonuclease G	identified by match to protein family HMM PF00575%3B match to protein family HMM TIGR00757	gene	gene2751	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2903
BFO_2904	BFO_2904	hup_3	hup_3	2938019	2938342	-	DNA-binding protein HU	identified by match to protein family HMM PF00216	gene	gene2752	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2904
BFO_2905	BFO_2905		BFO_2905	2938299	2938427	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2753	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2905
BFO_2906	BFO_2906	mutY	mutY	2938535	2939611	+	A/G-specific adenine glycosylase	identified by match to protein family HMM PF00633%3B match to protein family HMM PF00730%3B match to protein family HMM TIGR01084	gene	gene2754	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2906
BFO_2907	BFO_2907	ssb	ssb	2939704	2940153	+	single-strand binding protein	identified by match to protein family HMM PF00436%3B match to protein family HMM TIGR00621	gene	gene2755	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2907
BFO_2908	BFO_2908	gldE	gldE	2940210	2941484	+	gliding motility-associated protein GldE	identified by match to protein family HMM PF00571%3B match to protein family HMM PF01595%3B match to protein family HMM PF03471	gene	gene2756	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2908
BFO_2909	BFO_2909		BFO_2909	2941487	2942050	+	putative gliding motility-associated lipoprotein GldD		gene	gene2757	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2909
BFO_2910	BFO_2910		BFO_2910	2942053	2942676	+	hypothetical protein		gene	gene2758	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2910
BFO_2911	BFO_2911		BFO_2911	2942834	2942983	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2759	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2911
BFO_2912	BFO_2912		BFO_2912	2943077	2944981	-	bacterial group 2 Ig-like protein	identified by match to protein family HMM PF02368	gene	gene2760	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2912
BFO_2913	BFO_2913		BFO_2913	2945608	2946594	-	Tat pathway signal sequence domain protein	identified by match to protein family HMM PF01261%3B match to protein family HMM TIGR01409	gene	gene2761	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2913
BFO_2914	BFO_2914		BFO_2914	2946614	2948149	-	SusD family protein	identified by match to protein family HMM PF07980	gene	gene2762	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2914
BFO_2915	BFO_2915		BFO_2915	2948174	2951638	-	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07660%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene2763	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2915
BFO_2916	BFO_2916		BFO_2916	2951841	2952821	-	sigma factor regulatory protein%2C FecR/PupR family	identified by match to protein family HMM PF04773	gene	gene2764	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2916
BFO_2917	BFO_2917		BFO_2917	2952873	2953442	-	RNA polymerase sigma-70 factor	identified by match to protein family HMM PF00196%3B match to protein family HMM PF04542%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937%3B match to protein family HMM TIGR02985	gene	gene2765	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2917
BFO_2918	BFO_2918		BFO_2918	2953432	2953650	+	hypothetical protein		gene	gene2766	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2918
BFO_2919	BFO_2919		BFO_2919	2953716	2954672	+	NAD dependent epimerase/dehydratase family protein	identified by match to protein family HMM PF01370%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993	gene	gene2767	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2919
BFO_2920	BFO_2920		BFO_2920	2954691	2955272	+	PAP2 family protein	identified by match to protein family HMM PF01569%3B overlaps another CDS with the same product name	gene	gene2768	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2920
BFO_2921	BFO_2921		BFO_2921	2956115	2956291	-	hypothetical protein		gene	gene2770	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2921
BFO_2922	BFO_2922		BFO_2922	2955269	2956147	+	PAP2 family protein	identified by match to protein family HMM PF01569%3B overlaps another CDS with the same product name	gene	gene2769	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2922
BFO_2923	BFO_2923		BFO_2923	2956331	2956873	+	putative arginine decarboxylase%2C pyruvoyl-dependent		gene	gene2771	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2923
BFO_2924	BFO_2924		BFO_2924	2956956	2957072	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2772	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2924
BFO_2925	BFO_2925		BFO_2925	2957089	2957451	+	hypothetical protein		gene	gene2773	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2925
BFO_2926	BFO_2926		BFO_2926	2957485	2957694	-	hypothetical protein		gene	gene2774	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2926
BFO_2927	BFO_2927		BFO_2927	2958133	2958351	+	putative lipoprotein		gene	gene2775	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2927
BFO_2928	BFO_2928		BFO_2928	2958378	2959379	-	oxidoreductase%2C NAD-binding domain protein	identified by match to protein family HMM PF01408	gene	gene2776	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2928
BFO_2929	BFO_2929	gcvT	gcvT	2959376	2960461	-	aminomethyltransferase	identified by match to protein family HMM PF01571%3B match to protein family HMM PF08669%3B match to protein family HMM TIGR00528	gene	gene2777	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2929
BFO_2930	BFO_2930	pepT	pepT	2960464	2961690	-	peptidase T	identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01882	gene	gene2778	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2930
BFO_2931	BFO_2931		BFO_2931	2961880	2961956	+	tRNA-Thr		tRNA	gene2779	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2931
BFO_2932	BFO_2932		BFO_2932	2962019	2963059	+	glycosyltransferase%2C group 2 family protein	identified by match to protein family HMM PF00535	gene	gene2780	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2932
BFO_2933	BFO_2933		BFO_2933	2963683	2964417	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2781	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2933
BFO_2934	BFO_2934		BFO_2934	2965111	2965722	-	putative signal peptidase II		gene	gene2782	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2934
BFO_2935	BFO_2935		BFO_2935	2965736	2966116	-	putative RNA polymerase-binding protein DksA		gene	gene2783	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2935
BFO_2936	BFO_2936	ileS	ileS	2966184	2969636	-	isoleucine--tRNA ligase	identified by match to protein family HMM PF00133%3B match to protein family HMM PF08264%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00392	gene	gene2784	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2936
BFO_2937	BFO_2937		BFO_2937	2969964	2971034	+	Fic family protein		gene	gene2785	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2937
BFO_2938	BFO_2938		BFO_2938	2971045	2971581	-	TIGR00730 family protein	identified by match to protein family HMM PF03641%3B match to protein family HMM TIGR00730	gene	gene2786	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2938
BFO_2939	BFO_2939		BFO_2939	2971692	2972264	+	CDP-alcohol phosphatidyltransferase	identified by match to protein family HMM PF01066	gene	gene2787	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2939
BFO_2940	BFO_2940		BFO_2940	2972361	2974013	-	hypothetical protein		gene	gene2788	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2940
BFO_2941	BFO_2941		BFO_2941	2974365	2975621	-	hypothetical protein		gene	gene2789	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2941
BFO_2942	BFO_2942		BFO_2942	2975664	2975822	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2790	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2942
BFO_2943	BFO_2943		BFO_2943	2975819	2977084	+	nucleotide sugar dehydrogenase	identified by match to protein family HMM PF00984%3B match to protein family HMM PF03720%3B match to protein family HMM PF03721%3B match to protein family HMM TIGR03026	gene	gene2791	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2943
BFO_2944	BFO_2944		BFO_2944	2977127	2978206	-	putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	identified by match to protein family HMM PF00483	gene	gene2792	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2944
BFO_2945	BFO_2945		BFO_2945	2978292	2978597	-		conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2793	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2945
BFO_2946	BFO_2946		BFO_2946	2978653	2979078	-		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2794	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2946
BFO_2947	BFO_2947		BFO_2947	2979157	2981424	-	putative alpha-1%2C2-mannosidase	identified by match to protein family HMM PF07971%3B match to protein family HMM TIGR01180	gene	gene2795	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2947
BFO_2948	BFO_2948		BFO_2948	2981498	2982241	-	putative shikimate dehydrogenase	identified by match to protein family HMM PF01488%3B match to protein family HMM PF08501	gene	gene2796	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2948
BFO_2949	BFO_2949		BFO_2949	2982238	2982999	-	ubiquinone/menaquinone biosynthesis methyltransferase	identified by match to protein family HMM PF01209%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242%3B match to protein family HMM TIGR01934	gene	gene2797	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2949
BFO_2950	BFO_2950	purC	purC	2983006	2983953	-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	identified by match to protein family HMM PF01259	gene	gene2798	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2950
BFO_2951	BFO_2951		BFO_2951	2983974	2984948	-	putative PhoH-like protein	identified by match to protein family HMM PF02562	gene	gene2799	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2951
BFO_2952	BFO_2952		BFO_2952	2984945	2985103	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2800	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2952
BFO_2953	BFO_2953		BFO_2953	2985105	2987696	-	hypothetical protein		gene	gene2801	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2953
BFO_2954	BFO_2954		BFO_2954	2987707	2987832	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2802	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2954
BFO_2955	BFO_2955		BFO_2955	2987857	2989236	+	aminopeptidase P%2C N-terminal domain protein	identified by match to protein family HMM PF00557%3B match to protein family HMM PF05195	gene	gene2803	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2955
BFO_2956	BFO_2956		BFO_2956	2989254	2989394	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2804	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2956
BFO_2957	BFO_2957		BFO_2957	2989438	2990115	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2805	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2957
BFO_2958	BFO_2958		BFO_2958	2990240	2990947	-	putative lipoprotein		gene	gene2806	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2958
BFO_2959	BFO_2959		BFO_2959	2991038	2992522	-	hypothetical protein		gene	gene2807	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2959
BFO_2960	BFO_2960		BFO_2960	2992600	2993511	-	hypothetical protein		gene	gene2808	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2960
BFO_2961	BFO_2961		BFO_2961	2993525	2994622	-	hypothetical protein	overlaps another CDS with the same product name	gene	gene2809	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2961
BFO_2962	BFO_2962		BFO_2962	2994582	2995070	-	hypothetical protein	overlaps another CDS with the same product name	gene	gene2810	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2962
BFO_2963	BFO_2963		BFO_2963	2995107	2995844	-	putative lipoprotein		gene	gene2811	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2963
BFO_2964	BFO_2964		BFO_2964	2995947	2996369	-	hypothetical protein		gene	gene2812	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2964
BFO_2965	BFO_2965		BFO_2965	2996415	2997299	-	putative bacteriochlorophyll 4-vinyl reductase		gene	gene2813	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2965
BFO_2966	BFO_2966		BFO_2966	2997519	2998979	+	O-Glycosyl hydrolase family 30	identified by match to protein family HMM PF02055	gene	gene2814	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2966
BFO_2967	BFO_2967		BFO_2967	3001490	3003628	-	tetratricopeptide repeat protein	identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719	gene	gene2816	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2967
BFO_2968	BFO_2968		BFO_2968	2998995	3001505	+	glycosyl hydrolase family 2%2C sugar binding domain protein	identified by match to protein family HMM PF00703%3B match to protein family HMM PF02836%3B match to protein family HMM PF02837	gene	gene2815	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2968
BFO_2969	BFO_2969	lepA	lepA	3003717	3005504	+	GTP-binding protein LepA	identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF06421%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR01393	gene	gene2817	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2969
BFO_2970	BFO_2970		BFO_2970	3006385	3009534	+	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene2818	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2970
BFO_2971	BFO_2971		BFO_2971	3009537	3009653	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2819	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2971
BFO_2972	BFO_2972		BFO_2972	3009703	3011007	+	SusD family protein	identified by match to protein family HMM PF07980	gene	gene2820	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2972
BFO_2973	BFO_2973		BFO_2973	3011091	3012497	-	transglycosylase SLT domain protein	identified by match to protein family HMM PF01464	gene	gene2821	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2973
BFO_2974	BFO_2974	rumA	rumA	3012490	3013908	-	23S rRNA (uracil-5-)-methyltransferase RumA	identified by match to protein family HMM PF01170%3B match to protein family HMM PF01938%3B match to protein family HMM PF05958%3B match to protein family HMM TIGR00479	gene	gene2822	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2974
BFO_2975	BFO_2975	ppdK	ppdK	3014082	3016802	+	pyruvate%2C phosphate dikinase	identified by match to protein family HMM PF00391%3B match to protein family HMM PF01326%3B match to protein family HMM PF02896%3B match to protein family HMM TIGR01828	gene	gene2823	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2975
BFO_2976	BFO_2976		BFO_2976	3017007	3017360	+	LytTr DNA-binding domain protein	identified by match to protein family HMM PF04397	gene	gene2824	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2976
BFO_2977	BFO_2977		BFO_2977	3017357	3018016	+	FHA domain protein	identified by match to protein family HMM PF00498	gene	gene2825	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2977
BFO_2978	BFO_2978		BFO_2978	3018142	3018369	+	hypothetical protein		gene	gene2826	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2978
BFO_2979	BFO_2979		BFO_2979	3018366	3018872	+	FHA domain protein	identified by match to protein family HMM PF00498	gene	gene2827	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2979
BFO_2980	BFO_2980		BFO_2980	3018892	3019659	+		protein phosphatase 2C%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00481	pseudogene	gene2828	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2980
BFO_2981	BFO_2981		BFO_2981	3019740	3021617	+	kinase domain protein	identified by match to protein family HMM PF00069	gene	gene2829	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2981
BFO_2982	BFO_2982		BFO_2982	3021636	3022574	+	hypothetical protein		gene	gene2830	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2982
BFO_2983	BFO_2983		BFO_2983	3022590	3024743	+	kelch repeat protein		gene	gene2831	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2983
BFO_2984	BFO_2984		BFO_2984	3024842	3025045	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2832	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2984
BFO_2985	BFO_2985		BFO_2985	3025115	3028231	+	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056%3B match to protein family HMM TIGR04057	gene	gene2833	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2985
BFO_2986	BFO_2986		BFO_2986	3028245	3030128	+	SusD family protein	identified by match to protein family HMM PF07980	gene	gene2834	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2986
BFO_2987	BFO_2987		BFO_2987	3030340	3031191	-	acetyltransferase%2C GNAT family	identified by match to protein family HMM PF00583	gene	gene2835	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2987
BFO_2988	BFO_2988		BFO_2988	3031188	3032099	-	hypothetical protein		gene	gene2836	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2988
BFO_2989	BFO_2989	kbl	kbl	3032207	3033397	-	glycine C-acetyltransferase	identified by match to protein family HMM PF00155%3B match to protein family HMM PF00202%3B match to protein family HMM TIGR01822	gene	gene2837	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2989
BFO_2990	BFO_2990		BFO_2990	3033765	3034286	+	Sigma-70 region 2	identified by match to protein family HMM PF04542%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937	gene	gene2838	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2990
BFO_2991	BFO_2991		BFO_2991	3034307	3035620	+	hypothetical protein		gene	gene2839	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2991
BFO_2992	BFO_2992		BFO_2992	3035732	3036478	+	hypothetical protein		gene	gene2840	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2992
BFO_2993	BFO_2993		BFO_2993	3036659	3036775	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2841	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2993
BFO_2994	BFO_2994		BFO_2994	3036748	3037314	+	hypothetical protein		gene	gene2842	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2994
BFO_2995	BFO_2995	smpB	smpB	3037327	3037791	+	SsrA-binding protein	identified by match to protein family HMM PF01668%3B match to protein family HMM TIGR00086	gene	gene2843	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2995
BFO_2996	BFO_2996		BFO_2996	3037795	3038754	+	transporter gate domain protein	identified by match to protein family HMM PF07670	gene	gene2844	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2996
BFO_2997	BFO_2997		BFO_2997	3038759	3039166	+	hypothetical protein		gene	gene2845	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2997
BFO_2998	BFO_2998		BFO_2998	3039280	3040599	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2846	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2998
BFO_2999	BFO_2999	ppa	ppa	3040791	3041456	+	inorganic diphosphatase	identified by match to protein family HMM PF00719	gene	gene2847	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_2999
BFO_3000	BFO_3000		BFO_3000	3041682	3042272	+	hypothetical protein		gene	gene2848	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3000
BFO_3001	BFO_3001		BFO_3001	3042367	3043302	+	hypothetical protein		gene	gene2849	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3001
BFO_3002	BFO_3002		BFO_3002	3043401	3044564	+	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein	identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518	gene	gene2850	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3002
BFO_3003	BFO_3003		BFO_3003	3044579	3044704	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2851	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3003
BFO_3004	BFO_3004		BFO_3004	3044703	3045308	+	RNA polymerase sigma-70 factor	identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937%3B match to protein family HMM TIGR02985	gene	gene2852	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3004
BFO_3005	BFO_3005		BFO_3005	3045494	3045649	-	hypothetical protein		gene	gene2853	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3005
BFO_3006	BFO_3006		BFO_3006	3046344	3047240	+	hypothetical protein		gene	gene2854	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3006
BFO_3007	BFO_3007		BFO_3007	3047325	3048086	+	putative tRNA (guanine-N(7)-)-methyltransferase	identified by match to protein family HMM PF02390	gene	gene2855	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3007
BFO_3008	BFO_3008		BFO_3008	3048097	3049203	+	mrp family protein		gene	gene2856	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3008
BFO_3009	BFO_3009		BFO_3009	3049412	3049531	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2857	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3009
BFO_3010	BFO_3010		BFO_3010	3049688	3051391	-	peptidase%2C S41 family	identified by match to protein family HMM PF00595%3B match to protein family HMM PF03572%3B match to protein family HMM TIGR00225	gene	gene2858	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3010
BFO_3011	BFO_3011		BFO_3011	3051450	3052427	-	carbohydrate kinase%2C PfkB family	identified by match to protein family HMM PF00294	gene	gene2859	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3011
BFO_3012	BFO_3012		BFO_3012	3052512	3052588	+	tRNA-Asn		tRNA	gene2860	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3012
BFO_3013	BFO_3013		BFO_3013	3052599	3052736	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2861	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3013
BFO_3014	BFO_3014		BFO_3014	3052802	3055753	+	TonB-dependent receptor	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715	gene	gene2862	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3014
BFO_3015	BFO_3015		BFO_3015	3055804	3057135	+	hypothetical protein		gene	gene2863	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3015
BFO_3016	BFO_3016		BFO_3016	3057151	3058785	+	hypothetical protein		gene	gene2864	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3016
BFO_3017	BFO_3017		BFO_3017	3059150	3059353	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2865	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3017
BFO_3018	BFO_3018		BFO_3018	3059482	3059601	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2866	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3018
BFO_3019	BFO_3019		BFO_3019	3059634	3059750	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2867	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3019
BFO_3020	BFO_3020		BFO_3020	3060521	3060895	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2868	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3020
BFO_3021	BFO_3021		BFO_3021	3061055	3062575	-	arylsulfatase	identified by match to protein family HMM PF00884	gene	gene2869	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3021
BFO_3022	BFO_3022		BFO_3022	3062562	3062708	-	hypothetical protein		gene	gene2870	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3022
BFO_3023	BFO_3023		BFO_3023	3062714	3063370	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2871	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3023
BFO_3024	BFO_3024	secG	secG	3063538	3063906	-	preprotein translocase%2C SecG subunit	identified by match to protein family HMM PF03840%3B match to protein family HMM TIGR00810	gene	gene2872	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3024
BFO_3025	BFO_3025		BFO_3025	3063906	3064670	-	hypothetical protein		gene	gene2873	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3025
BFO_3026	BFO_3026		BFO_3026	3064674	3065210	-	hypothetical protein		gene	gene2874	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3026
BFO_3027	BFO_3027		BFO_3027	3065197	3066378	-	Sigma-54 interaction domain protein	identified by match to protein family HMM PF00158%3B match to protein family HMM PF02954	gene	gene2875	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3027
BFO_3028	BFO_3028		BFO_3028	3066492	3067319	-	Acyltransferase	identified by match to protein family HMM PF01553	gene	gene2876	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3028
BFO_3029	BFO_3029		BFO_3029	3067316	3068227	-	CDP-alcohol phosphatidyltransferase	identified by match to protein family HMM PF01066	gene	gene2877	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3029
BFO_3030	BFO_3030		BFO_3030	3068231	3068959	-	oxidoreductase%2C short chain dehydrogenase/reductase family protein	identified by match to protein family HMM PF00106%3B match to protein family HMM PF01370%3B match to protein family HMM PF08659	gene	gene2878	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3030
BFO_3031	BFO_3031		BFO_3031	3068962	3069483	-	putative glycerol-3-phosphate cytidylyltransferase	identified by match to protein family HMM PF01467%3B match to protein family HMM TIGR00125	gene	gene2879	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3031
BFO_3032	BFO_3032		BFO_3032	3069769	3069894	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2880	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3032
BFO_3033	BFO_3033	pdxA	pdxA	3069851	3070951	-	4-hydroxythreonine-4-phosphate dehydrogenase	identified by match to protein family HMM PF04166%3B match to protein family HMM TIGR00557	gene	gene2881	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3033
BFO_3034	BFO_3034		BFO_3034	3070944	3072014	-	putative lipoprotein		gene	gene2882	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3034
BFO_3035	BFO_3035	rlmN	rlmN	3072094	3073140	-	23S rRNA m2A2503 methyltransferase	identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR00048	gene	gene2883	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3035
BFO_3036	BFO_3036		BFO_3036	3073272	3075446	-	PPIC-type PPIASE domain protein	identified by match to protein family HMM PF00639	gene	gene2884	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3036
BFO_3037	BFO_3037		BFO_3037	3075547	3076173	-	hypothetical protein	identified by match to protein family HMM PF06835	gene	gene2885	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3037
BFO_3038	BFO_3038		BFO_3038	3076183	3077550	-	tetratricopeptide repeat protein		gene	gene2886	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3038
BFO_3039	BFO_3039		BFO_3039	3077599	3078924	-	transporter%2C Ompp1/FadL/TodX family	identified by match to protein family HMM PF03349	gene	gene2887	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3039
BFO_3040	BFO_3040		BFO_3040	3079218	3080474	+	putative membrane protein		gene	gene2888	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3040
BFO_3041	BFO_3041		BFO_3041	3080471	3082057	+	type I phosphodiesterase/nucleotide pyrophosphatase	identified by match to protein family HMM PF01663	gene	gene2889	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3041
BFO_3042	BFO_3042	secA	secA	3082124	3085462	+	preprotein translocase%2C SecA subunit	identified by match to protein family HMM PF00271%3B match to protein family HMM PF01043%3B match to protein family HMM PF02810%3B match to protein family HMM PF07516%3B match to protein family HMM PF07517%3B match to protein family HMM TIGR00963	gene	gene2890	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3042
BFO_3043	BFO_3043		BFO_3043	3085548	3089606	+	response regulator receiver domain protein	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00165%3B match to protein family HMM PF00512%3B match to protein family HMM PF02518%3B match to protein family HMM PF07494	gene	gene2891	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3043
BFO_3044	BFO_3044		BFO_3044	3089643	3091730	-	tetratricopeptide repeat protein	identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719	gene	gene2892	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3044
BFO_3045	BFO_3045	def	def	3091735	3092292	-	peptide deformylase	identified by match to protein family HMM PF01327%3B match to protein family HMM TIGR00079	gene	gene2893	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3045
BFO_3046	BFO_3046		BFO_3046	3092304	3092726	-	RNAse H domain protein%2C YqgF family	identified by match to protein family HMM PF03652%3B match to protein family HMM TIGR00250	gene	gene2894	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3046
BFO_3047	BFO_3047		BFO_3047	3092730	3094127	-	undecaprenyl-phosphate glucose phosphotransferase	identified by match to protein family HMM PF02397%3B match to protein family HMM TIGR03023%3B match to protein family HMM TIGR03025	gene	gene2895	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3047
BFO_3048	BFO_3048		BFO_3048	3094592	3095794	-	transposase%2C IS116/IS110/IS902 family	identified by match to protein family HMM PF02371	gene	gene2896	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3048
BFO_3049	BFO_3049		BFO_3049	3095756	3095959	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2897	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3049
BFO_3050	BFO_3050	ffh	ffh	3095952	3097280	+	signal recognition particle protein	identified by match to protein family HMM PF00448%3B match to protein family HMM PF02881%3B match to protein family HMM PF02978%3B match to protein family HMM TIGR00959	gene	gene2898	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3050
BFO_3051	BFO_3051		BFO_3051	3097293	3098201	+	tetrahydrofolate dehydrogenase/cyclohydrolase%2C NAD(P)-binding domain protein	identified by match to protein family HMM PF00763%3B match to protein family HMM PF02882	gene	gene2899	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3051
BFO_3052	BFO_3052		BFO_3052	3098341	3099591	-	efflux ABC transporter%2C permease protein	identified by match to protein family HMM PF02687	gene	gene2900	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3052
BFO_3053	BFO_3053		BFO_3053	3099648	3100883	-	aminotransferase%2C class I/II	identified by match to protein family HMM PF00155	gene	gene2901	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3053
BFO_3054	BFO_3054		BFO_3054	3100844	3100972	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2902	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3054
BFO_3055	BFO_3055	lpdA	lpdA	3101171	3102529	+	dihydrolipoyl dehydrogenase	identified by match to protein family HMM PF00070%3B match to protein family HMM PF02852%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01350	gene	gene2903	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3055
BFO_3056	BFO_3056		BFO_3056	3102532	3103845	+	aminotransferase%2C class I/II	identified by match to protein family HMM PF00155	gene	gene2904	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3056
BFO_3057	BFO_3057		BFO_3057	3103961	3104554	+	hypothetical protein	identified by match to protein family HMM PF02622	gene	gene2905	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3057
BFO_3058	BFO_3058		BFO_3058	3104851	3106131	-	O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	identified by match to protein family HMM PF01053%3B match to protein family HMM TIGR01326	gene	gene2906	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3058
BFO_3059	BFO_3059		BFO_3059	3106190	3107476	-	putative membrane protein		gene	gene2907	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3059
BFO_3060	BFO_3060		BFO_3060	3107473	3108396	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene2908	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3060
BFO_3061	BFO_3061	dnaG	dnaG	3108402	3110498	-	DNA primase	identified by match to protein family HMM PF01751%3B match to protein family HMM PF01807%3B match to protein family HMM PF08275%3B match to protein family HMM TIGR01391	gene	gene2909	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3061
BFO_3062	BFO_3062		BFO_3062	3110544	3112127	-	O-antigen polymerase	identified by match to protein family HMM PF04932	gene	gene2910	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3062
BFO_3063	BFO_3063		BFO_3063	3112145	3112984	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2911	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3063
BFO_3064	BFO_3064		BFO_3064	3112947	3113645	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2912	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3064
BFO_3065	BFO_3065		BFO_3065	3113731	3114522	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2913	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3065
BFO_3066	BFO_3066		BFO_3066	3114539	3115237	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2914	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3066
BFO_3067	BFO_3067		BFO_3067	3115323	3116045	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2915	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3067
BFO_3068	BFO_3068		BFO_3068	3116063	3116749	-	hypothetical protein		gene	gene2916	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3068
BFO_3069	BFO_3069		BFO_3069	3116809	3116937	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2917	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3069
BFO_3070	BFO_3070		BFO_3070	3116938	3117726	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2918	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3070
BFO_3071	BFO_3071		BFO_3071	3117743	3118441	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2919	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3071
BFO_3072	BFO_3072		BFO_3072	3118622	3118948	-	hypothetical protein		gene	gene2920	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3072
BFO_3073	BFO_3073		BFO_3073	3118948	3119250	-	septum formation initiator	identified by match to protein family HMM PF04977	gene	gene2921	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3073
BFO_3074	BFO_3074		BFO_3074	3120510	3120695	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2923	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3074
BFO_3075	BFO_3075	dnaX	dnaX	3119267	3120529	+		DNA polymerase III%2C subunit gamma and tau%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00004%3B match to protein family HMM PF06144%3B match to protein family HMM TIGR02397	pseudogene	gene2922	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3075
BFO_3076	BFO_3076		BFO_3076	3120712	3121131	+		conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene2924	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3076
BFO_3077	BFO_3077	lon	lon	3121185	3123677	-	endopeptidase La	identified by match to protein family HMM PF00004%3B match to protein family HMM PF02190%3B match to protein family HMM PF05362%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR00763	gene	gene2925	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3077
BFO_3078	BFO_3078	ptrB	ptrB	3123857	3126037	-	protease 2	identified by match to protein family HMM PF00326%3B match to protein family HMM PF02897	gene	gene2926	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3078
BFO_3079	BFO_3079		BFO_3079	3126071	3126916	-	putative lipoprotein		gene	gene2927	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3079
BFO_3080	BFO_3080		BFO_3080	3126958	3129048	-	peptidase%2C S9A/B/C family%2C catalytic domain protein	identified by match to protein family HMM PF00326%3B match to protein family HMM PF02129%3B match to protein family HMM PF07676	gene	gene2928	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3080
BFO_3081	BFO_3081	fcl	fcl	3129926	3130993	-	GDP-L-fucose synthetase	identified by match to protein family HMM PF01370	gene	gene2930	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3081
BFO_3082	BFO_3082	maf	maf	3129239	3129934	+	septum formation protein Maf	identified by match to protein family HMM PF02545%3B match to protein family HMM TIGR00172	gene	gene2929	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3082
BFO_3083	BFO_3083		BFO_3083	3131058	3131378	-	hypothetical protein		gene	gene2931	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3083
BFO_3084	BFO_3084	gmd	gmd	3131466	3132545	-	GDP-mannose 4%2C6-dehydratase	identified by match to protein family HMM PF01370%3B match to protein family HMM TIGR01472	gene	gene2932	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3084
BFO_3085	BFO_3085		BFO_3085	3132559	3132672	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2933	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3085
BFO_3086	BFO_3086		BFO_3086	3132676	3132825	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2934	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3086
BFO_3087	BFO_3087		BFO_3087	3132852	3133514	+	ribosomal protein L25%2C Ctc-form	identified by match to protein family HMM TIGR00731	gene	gene2935	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3087
BFO_3088	BFO_3088	pth	pth	3133608	3134171	+	aminoacyl-tRNA hydrolase	identified by match to protein family HMM PF01195%3B match to protein family HMM TIGR00447	gene	gene2936	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3088
BFO_3089	BFO_3089		BFO_3089	3134168	3134587	+	S4 domain protein	identified by match to protein family HMM PF01479	gene	gene2937	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3089
BFO_3090	BFO_3090		BFO_3090	3134707	3137298	-	hypothetical protein		gene	gene2938	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3090
BFO_3091	BFO_3091		BFO_3091	3137422	3137976	+	chromate transport protein	identified by match to protein family HMM PF02417%3B overlaps another CDS with the same product name	gene	gene2939	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3091
BFO_3092	BFO_3092		BFO_3092	3137973	3138506	+	chromate transport protein	identified by match to protein family HMM PF02417%3B overlaps another CDS with the same product name	gene	gene2940	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3092
BFO_3093	BFO_3093		BFO_3093	3138549	3139592	+	DHHA1 domain protein	identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272	gene	gene2941	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3093
BFO_3094	BFO_3094		BFO_3094	3139597	3140232	-	hypothetical protein		gene	gene2942	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3094
BFO_3095	BFO_3095		BFO_3095	3140229	3140474	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2943	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3095
BFO_3096	BFO_3096		BFO_3096	3140677	3142041	+	hypothetical protein		gene	gene2944	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3096
BFO_3097	BFO_3097		BFO_3097	3142053	3142667	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2945	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3097
BFO_3098	BFO_3098		BFO_3098	3142633	3144156	+	Alg9-like mannosyltransferase family protein	identified by match to protein family HMM PF03901	gene	gene2946	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3098
BFO_3099	BFO_3099	lepB_5	lepB_5	3144175	3144828	+	signal peptidase I	identified by match to protein family HMM PF00717%3B match to protein family HMM TIGR02227	gene	gene2947	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3099
BFO_3100	BFO_3100		BFO_3100	3144946	3146793	+	putative lipid A export ATP-binding/permease protein MsbA	identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664	gene	gene2948	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3100
BFO_3101	BFO_3101		BFO_3101	3146866	3149418	+	putative lipoprotein		gene	gene2949	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3101
BFO_3102	BFO_3102		BFO_3102	3149486	3150907	+	outer membrane efflux protein	identified by match to protein family HMM PF02321	gene	gene2950	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3102
BFO_3103	BFO_3103		BFO_3103	3150959	3151951	+	auxiliary transport protein%2C membrane fusion protein (MFP) family protein	identified by match to protein family HMM PF00529	gene	gene2951	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3103
BFO_3104	BFO_3104		BFO_3104	3151962	3153140	+	ABC-2 type transporter	identified by match to protein family HMM PF01061	gene	gene2952	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3104
BFO_3105	BFO_3105		BFO_3105	3153153	3154394	+	putative membrane protein		gene	gene2953	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3105
BFO_3106	BFO_3106	menA	menA	3154396	3155274	+	1%2C4-dihydroxy-2-naphthoate octaprenyltransferase	identified by match to protein family HMM PF01040%3B match to protein family HMM TIGR00751	gene	gene2954	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3106
BFO_3110	BFO_3110		BFO_3110	3155582	3158623	+	TonB-linked outer membrane protein%2C SusC/RagA family		gene	gene2955	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3110
BFO_3111	BFO_3111		BFO_3111	3158644	3160095	+	SusD family protein	identified by match to protein family HMM PF07980	gene	gene2956	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3111
BFO_3112	BFO_3112		BFO_3112	3160239	3162638	-	carbohydrate binding domain protein	identified by match to protein family HMM PF02018	gene	gene2957	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3112
BFO_3113	BFO_3113		BFO_3113	3162802	3162945	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2958	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3113
BFO_3114	BFO_3114		BFO_3114	3162927	3164225	+	serpin	identified by match to protein family HMM PF00079	gene	gene2959	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3114
BFO_3115	BFO_3115		BFO_3115	3164271	3164810	-	DJ-1 family protein	identified by match to protein family HMM PF01965%3B match to protein family HMM TIGR01383	gene	gene2960	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3115
BFO_3116	BFO_3116		BFO_3116	3164847	3165683	-	TonB family C-terminal domain protein	identified by match to protein family HMM TIGR01352	gene	gene2961	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3116
BFO_3117	BFO_3117		BFO_3117	3165680	3166099	-	transport energizing protein%2C ExbD/TolR family	identified by match to protein family HMM PF02472	gene	gene2962	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3117
BFO_3118	BFO_3118		BFO_3118	3166105	3166818	-	transporter%2C MotA/TolQ/ExbB proton channel family protein	identified by match to protein family HMM PF01618	gene	gene2963	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3118
BFO_3119	BFO_3119	pdxJ	pdxJ	3166858	3167577	-	pyridoxine 5'-phosphate synthase	identified by match to protein family HMM PF03740%3B match to protein family HMM TIGR00559	gene	gene2964	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3119
BFO_3120	BFO_3120		BFO_3120	3167690	3168565	+	NAD(+)/NADH kinase	identified by match to protein family HMM PF01513	gene	gene2965	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3120
BFO_3121	BFO_3121		BFO_3121	3168860	3169591	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF07549	pseudogene	gene2966	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3121
BFO_3122	BFO_3122	secD	secD	3169591	3171891	+		export membrane protein SecD%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02355%3B match to protein family HMM PF07549%3B match to protein family HMM TIGR00916%3B match to protein family HMM TIGR00966%3B match to protein family HMM TIGR01129	pseudogene	gene2967	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3122
BFO_3123	BFO_3123		BFO_3123	3172050	3172163	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2968	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3123
BFO_3124	BFO_3124		BFO_3124	3172215	3172997	-	hypothetical protein		gene	gene2969	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3124
BFO_3125	BFO_3125		BFO_3125	3173461	3174375	-	transposase%2C IS4 family	identified by match to protein family HMM PF01609	gene	gene2970	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3125
BFO_3126	BFO_3126	nifJ	nifJ	3174749	3178291	-	pyruvate synthase	identified by match to protein family HMM PF00037%3B match to protein family HMM PF01558%3B match to protein family HMM PF01855%3B match to protein family HMM TIGR02175%3B match to protein family HMM TIGR02176	gene	gene2971	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3126
BFO_3127	BFO_3127		BFO_3127	3178331	3179509	-	hypothetical protein		gene	gene2972	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3127
BFO_3128	BFO_3128		BFO_3128	3179486	3179647	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2973	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3128
BFO_3129	BFO_3129		BFO_3129	3179675	3180178	-	putative lipoprotein		gene	gene2974	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3129
BFO_3130	BFO_3130	ilvE	ilvE	3180262	3181281	-	branched-chain-amino-acid transaminase	identified by match to protein family HMM PF01063%3B match to protein family HMM TIGR01123	gene	gene2975	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3130
BFO_3131	BFO_3131		BFO_3131	3181591	3183054	-	SPFH/Band 7/PHB domain protein	identified by match to protein family HMM PF01145	gene	gene2976	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3131
BFO_3132	BFO_3132		BFO_3132	3183106	3183453	-	glyoxalase family protein	identified by match to protein family HMM PF00903	gene	gene2977	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3132
BFO_3133	BFO_3133		BFO_3133	3183486	3184067	-	hypothetical protein		gene	gene2978	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3133
BFO_3134	BFO_3134		BFO_3134	3184159	3186723	-	hypothetical protein		gene	gene2979	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3134
BFO_3135	BFO_3135		BFO_3135	3186741	3186881	+	putative lipoprotein		gene	gene2980	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3135
BFO_3136	BFO_3136		BFO_3136	3186884	3188548	+	TrkA C-terminal domain protein	identified by match to protein family HMM PF02080%3B match to protein family HMM PF06826%3B match to protein family HMM TIGR01625	gene	gene2981	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3136
BFO_3137	BFO_3137		BFO_3137	3188548	3189303	+	hypothetical protein		gene	gene2982	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3137
BFO_3138	BFO_3138		BFO_3138	3189343	3190200	+	hypothetical protein		gene	gene2983	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3138
BFO_3139	BFO_3139		BFO_3139	3190200	3191120	+	CDP-alcohol phosphatidyltransferase	identified by match to protein family HMM PF01066	gene	gene2984	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3139
BFO_3140	BFO_3140		BFO_3140	3191117	3191848	+	haloacid dehalogenase-like hydrolase	identified by match to protein family HMM PF00702	gene	gene2985	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3140
BFO_3141	BFO_3141		BFO_3141	3191909	3192328	+	hypothetical protein		gene	gene2986	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3141
BFO_3142	BFO_3142		BFO_3142	3192404	3193642	+	efflux transporter%2C RND family%2C MFP subunit	identified by match to protein family HMM TIGR01730	gene	gene2987	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3142
BFO_3143	BFO_3143		BFO_3143	3193656	3196739	+	heavy metal efflux pump%2C CzcA family	identified by match to protein family HMM PF00873%3B match to protein family HMM TIGR00914	gene	gene2988	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3143
BFO_3144	BFO_3144		BFO_3144	3196736	3197917	+	outer membrane efflux protein	identified by match to protein family HMM PF02321	gene	gene2989	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3144
BFO_3145	BFO_3145		BFO_3145	3198082	3198942	-	AP endonuclease%2C family 2	identified by match to protein family HMM PF01261	gene	gene2990	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3145
BFO_3146	BFO_3146		BFO_3146	3198972	3200285	-	hypothetical protein	identified by match to protein family HMM PF06439	gene	gene2991	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3146
BFO_3147	BFO_3147		BFO_3147	3200328	3200828	+	hypothetical protein		gene	gene2992	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3147
BFO_3148	BFO_3148		BFO_3148	3200844	3201467	+	hypothetical protein	identified by match to protein family HMM PF02577	gene	gene2993	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3148
BFO_3149	BFO_3149		BFO_3149	3201497	3202195	+	RNA methyltransferase%2C RsmE family	identified by match to protein family HMM PF04452%3B match to protein family HMM TIGR00046	gene	gene2994	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3149
BFO_3150	BFO_3150	rnpB	rnpB	3202331	3202651	+	Bacterial RNase P class A		gene	gene2995	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3150
BFO_3151	BFO_3151		BFO_3151	3202698	3204062	+	YihY family protein	identified by match to protein family HMM PF03631%3B match to protein family HMM TIGR00765	gene	gene2996	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3151
BFO_3152	BFO_3152		BFO_3152	3204083	3204220	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2997	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3152
BFO_3153	BFO_3153		BFO_3153	3204300	3206738	+	homoserine dehydrogenase	identified by match to protein family HMM PF00696%3B match to protein family HMM PF00742%3B match to protein family HMM PF01842%3B match to protein family HMM PF03447%3B match to protein family HMM TIGR00657	gene	gene2998	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3153
BFO_3154	BFO_3154		BFO_3154	3206745	3207950	+	proposed homoserine kinase	identified by match to protein family HMM PF01676%3B match to protein family HMM TIGR00306%3B match to protein family HMM TIGR02535	gene	gene2999	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3154
BFO_3155	BFO_3155		BFO_3155	3208955	3209851	-	sodium bile acid symporter family protein	identified by match to protein family HMM PF01758	gene	gene3000	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3155
BFO_3156	BFO_3156		BFO_3156	3209895	3211883	-	glucosamine-6-phosphate deaminase-like protein	identified by match to protein family HMM PF01182%3B match to protein family HMM PF02585	gene	gene3001	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3156
BFO_3157	BFO_3157		BFO_3157	3211892	3212005	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3002	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3157
BFO_3158	BFO_3158	priA	priA	3212046	3214508	-	primosomal protein N'	identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM TIGR00595	gene	gene3003	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3158
BFO_3159	BFO_3159		BFO_3159	3214535	3215137	-	hypothetical protein		gene	gene3004	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3159
BFO_3160	BFO_3160		BFO_3160	3215505	3215729	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3005	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3160
BFO_3161	BFO_3161		BFO_3161	3215905	3216210	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3006	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3161
BFO_3162	BFO_3162		BFO_3162	3216058	3216471	+		conserved domain protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene3007	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3162
BFO_3163	BFO_3163		BFO_3163	3216481	3216675	+		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene3008	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3163
BFO_3164	BFO_3164		BFO_3164	3216650	3216763	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3009	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3164
BFO_3165	BFO_3165		BFO_3165	3216764	3217009	+		appr-1-p processing enzyme domain protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene3010	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3165
BFO_3166	BFO_3166		BFO_3166	3217115	3217273	+		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene3011	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3166
BFO_3167	BFO_3167		BFO_3167	3217231	3217587	+		conserved hypothetical protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene3012	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3167
BFO_3168	BFO_3168		BFO_3168	3217633	3218121	+		conserved hypothetical protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene3013	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3168
BFO_3169	BFO_3169		BFO_3169	3218118	3218279	+		conserved hypothetical protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene3014	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3169
BFO_3170	BFO_3170		BFO_3170	3218254	3218733	+	hypothetical protein	identified by match to protein family HMM PF04304	gene	gene3015	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3170
BFO_3171	BFO_3171		BFO_3171	3218740	3219750	+	peptidase%2C M28 family	identified by match to protein family HMM PF01546%3B match to protein family HMM PF04389	gene	gene3016	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3171
BFO_3172	BFO_3172		BFO_3172	3219865	3220032	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3017	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3172
BFO_3173	BFO_3173		BFO_3173	3220003	3220554	+	hypothetical protein		gene	gene3018	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3173
BFO_3174	BFO_3174		BFO_3174	3220583	3221269	+	nitroreductase family protein	identified by match to protein family HMM PF00881	gene	gene3019	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3174
BFO_3175	BFO_3175		BFO_3175	3221348	3223003	-	AMP-binding enzyme	identified by match to protein family HMM PF00501	gene	gene3020	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3175
BFO_3176	BFO_3176		BFO_3176	3223499	3224317	-	integrase core domain protein	identified by match to protein family HMM PF00665	gene	gene3021	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3176
BFO_3177	BFO_3177		BFO_3177	3224259	3224513	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3022	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3177
BFO_3178	BFO_3178		BFO_3178	3224541	3224687	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3023	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3178
BFO_3179	BFO_3179		BFO_3179	3224714	3224911	-		hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene3024	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3179
BFO_3180	BFO_3180		BFO_3180	3224968	3225882	+	transposase%2C IS4 family	identified by match to protein family HMM PF01609	gene	gene3025	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3180
BFO_3181	BFO_3181		BFO_3181	3225928	3226122	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3026	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3181
BFO_3182	BFO_3182		BFO_3182	3226577	3227158	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3028	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3182
BFO_3183	BFO_3183		BFO_3183	3226432	3226605	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3027	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3183
BFO_3184	BFO_3184		BFO_3184	3227784	3231389	+	helicase C-terminal domain protein		gene	gene3029	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3184
BFO_3185	BFO_3185		BFO_3185	3231544	3232164	+	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene3030	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3185
BFO_3186	BFO_3186		BFO_3186	3232212	3233021	+	hypothetical protein		gene	gene3031	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3186
BFO_3187	BFO_3187		BFO_3187	3233014	3234144	+	putative 3-oxoacyl-(acyl carrier protein) synthase III	identified by match to protein family HMM PF08541	gene	gene3032	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3187
BFO_3188	BFO_3188		BFO_3188	3234168	3236420	+	efflux transporter%2C HAE3 family		gene	gene3033	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3188
BFO_3189	BFO_3189		BFO_3189	3236417	3237151	+		conserved domain protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3034	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3189
BFO_3190	BFO_3190		BFO_3190	3237163	3238569	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3035	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3190
BFO_3191	BFO_3191		BFO_3191	3238624	3240054	+		putative lipoprotein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3036	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3191
BFO_3192	BFO_3192		BFO_3192	3240126	3240560	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3037	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3192
BFO_3193	BFO_3193		BFO_3193	3240594	3241052	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3038	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3193
BFO_3194	BFO_3194		BFO_3194	3241063	3241590	+	putative lipoprotein		gene	gene3039	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3194
BFO_3195	BFO_3195		BFO_3195	3241675	3242343	+	HAD hydrolase%2C family IA%2C variant 1	identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01549	gene	gene3040	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3195
BFO_3196	BFO_3196		BFO_3196	3242363	3242677	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3041	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3196
BFO_3197	BFO_3197		BFO_3197	3242865	3243926	-	O-succinylbenzoic acid--CoA ligase		gene	gene3042	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3197
BFO_3198	BFO_3198		BFO_3198	3243950	3245023	-	putative o-succinylbenzoate synthase	identified by match to protein family HMM PF01188	gene	gene3043	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3198
BFO_3199	BFO_3199	menB_2	menB_2	3245020	3245844	-	naphthoate synthase	identified by match to protein family HMM PF00378%3B match to protein family HMM TIGR01929	gene	gene3044	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3199
BFO_3200	BFO_3200	menD_2	menD_2	3245863	3247596	-	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase	identified by match to protein family HMM PF02776%3B match to protein family HMM TIGR00173	gene	gene3045	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3200
BFO_3201	BFO_3201		BFO_3201	3247596	3248747	-	isochorismate synthase	identified by match to protein family HMM PF00425%3B match to protein family HMM TIGR00543	gene	gene3046	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3201
BFO_3202	BFO_3202		BFO_3202	3248781	3250232	-	divergent AAA domain protein	identified by match to protein family HMM PF04326	gene	gene3047	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3202
BFO_3203	BFO_3203		BFO_3203	3250421	3250648	-	hypothetical protein		gene	gene3048	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3203
BFO_3204	BFO_3204		BFO_3204	3250687	3252012	+	hypothetical protein		gene	gene3049	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3204
BFO_3205	BFO_3205		BFO_3205	3252069	3252263	-	hypothetical protein		gene	gene3050	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3205
BFO_3206	BFO_3206		BFO_3206	3252260	3253657	-	Toprim domain protein		gene	gene3051	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3206
BFO_3207	BFO_3207		BFO_3207	3253983	3254873	+		transposase%2C IS4 family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01609	pseudogene	gene3052	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3207
BFO_3208	BFO_3208		BFO_3208	3255124	3257394	-	putative flagellar protein FliS		gene	gene3053	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3208
BFO_3209	BFO_3209		BFO_3209	3257481	3258860	-	radical SAM domain protein	identified by match to protein family HMM PF04055	gene	gene3054	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3209
BFO_3210	BFO_3210		BFO_3210	3259107	3259229	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3055	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3210
BFO_3211	BFO_3211		BFO_3211	3259835	3260038	+		ISPg6%2C transposase family protein%3B this region contains one or more premature stops and/or frameshifts	pseudogene	gene3056	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3211
BFO_3212	BFO_3212		BFO_3212	3260318	3262303	-	TraG family protein		gene	gene3057	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3212
BFO_3213	BFO_3213		BFO_3213	3262305	3262487	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3058	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3213
BFO_3214	BFO_3214		BFO_3214	3262566	3262700	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3059	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3214
BFO_3215	BFO_3215		BFO_3215	3262775	3264214	+	hypothetical protein		gene	gene3060	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3215
BFO_3216	BFO_3216		BFO_3216	3264217	3264762	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3061	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3216
BFO_3217	BFO_3217		BFO_3217	3264722	3264844	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3062	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3217
BFO_3218	BFO_3218		BFO_3218	3265451	3265693	+	hypothetical protein		gene	gene3063	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3218
BFO_3219	BFO_3219		BFO_3219	3266021	3266146	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3064	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3219
BFO_3220	BFO_3220		BFO_3220	3266212	3266373	+		hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by glimmer%3B putative	pseudogene	gene3065	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3220
BFO_3221	BFO_3221		BFO_3221	3266509	3266832	+	hypothetical protein		gene	gene3066	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3221
BFO_3222	BFO_3222	traN_2	traN_2	3266825	3267727	+	conjugative transposon TraN protein	identified by match to protein family HMM TIGR03780	gene	gene3067	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3222
BFO_3223	BFO_3223		BFO_3223	3267721	3268299	+	conjugative transposon protein TraO		gene	gene3068	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3223
BFO_3224	BFO_3224		BFO_3224	3268312	3268776	+	conjugative transposon protein TraQ		gene	gene3069	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3224
BFO_3225	BFO_3225		BFO_3225	3268804	3268929	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3070	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3225
BFO_3226	BFO_3226		BFO_3226	3268898	3269044	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3071	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3226
BFO_3227	BFO_3227		BFO_3227	3269131	3269577	-	hypothetical protein		gene	gene3072	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3227
BFO_3228	BFO_3228		BFO_3228	3270052	3270477	+	hypothetical protein		gene	gene3073	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3228
BFO_3229	BFO_3229		BFO_3229	3270657	3270770	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3074	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3229
BFO_3230	BFO_3230		BFO_3230	3270754	3270894	+	hypothetical protein		gene	gene3075	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3230
BFO_3231	BFO_3231		BFO_3231	3270905	3271996	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3076	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3231
BFO_3232	BFO_3232		BFO_3232	3273294	3273434	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3077	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3232
BFO_3233	BFO_3233		BFO_3233	3273661	3273852	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3078	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3233
BFO_3234	BFO_3234		BFO_3234	3274423	3274539	-	hypothetical protein		gene	gene3079	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3234
BFO_3235	BFO_3235		BFO_3235	3274786	3274923	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3080	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3235
BFO_3236	BFO_3236		BFO_3236	3274976	3275491	-	hypothetical protein		gene	gene3081	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3236
BFO_3237	BFO_3237		BFO_3237	3275532	3276146	-	methyltransferase domain protein	identified by match to protein family HMM PF01209%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene3082	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3237
BFO_3238	BFO_3238		BFO_3238	3276161	3276733	-	hypothetical protein	identified by match to protein family HMM PF06966	gene	gene3083	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3238
BFO_3239	BFO_3239		BFO_3239	3276730	3277374	-	putative membrane protein		gene	gene3084	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3239
BFO_3240	BFO_3240		BFO_3240	3277970	3278428	-	hypothetical protein		gene	gene3086	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3240
BFO_3241	BFO_3241		BFO_3241	3277850	3277990	+	hypothetical protein		gene	gene3085	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3241
BFO_3242	BFO_3242		BFO_3242	3278455	3278988	-	hypothetical protein		gene	gene3087	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3242
BFO_3243	BFO_3243		BFO_3243	3279024	3279200	-	hypothetical protein		gene	gene3088	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3243
BFO_3244	BFO_3244		BFO_3244	3279225	3279350	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3089	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3244
BFO_3245	BFO_3245		BFO_3245	3279515	3280744	+	site-specific recombinase%2C phage integrase family	identified by match to protein family HMM PF00589	gene	gene3090	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3245
BFO_3246	BFO_3246		BFO_3246	3280797	3281999	+	site-specific recombinase%2C phage integrase family	identified by match to protein family HMM PF00589	gene	gene3091	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3246
BFO_3247	BFO_3247		BFO_3247	3282018	3282518	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3092	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3247
BFO_3248	BFO_3248		BFO_3248	3282627	3283190	+		conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error	pseudogene	gene3093	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3248
BFO_3249	BFO_3249		BFO_3249	3283203	3283565	+	putative lipoprotein		gene	gene3094	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3249
BFO_3250	BFO_3250		BFO_3250	3283627	3284031	-	SnoaL-like polyketide cyclase	identified by match to protein family HMM PF07366	gene	gene3095	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3250
BFO_3251	BFO_3251		BFO_3251	3284165	3284479	+	putative HTH-type transcriptional activator HxlR	identified by match to protein family HMM PF01638	gene	gene3096	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3251
BFO_3252	BFO_3252		BFO_3252	3284533	3285381	+	DNA-damage-inducible protein D family protein		gene	gene3097	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3252
BFO_3253	BFO_3253		BFO_3253	3285401	3285793	+		conserved domain protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene3098	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3253
BFO_3254	BFO_3254		BFO_3254	3285839	3285994	+		DJ-1/PfpI family protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene3099	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3254
BFO_3255	BFO_3255		BFO_3255	3286022	3286429	+	hypothetical protein		gene	gene3100	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3255
BFO_3256	BFO_3256		BFO_3256	3286449	3286976	+	hypothetical protein		gene	gene3101	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3256
BFO_3257	BFO_3257		BFO_3257	3287010	3287858	+	transcriptional regulator%2C AraC family	identified by match to protein family HMM PF00165%3B match to protein family HMM PF07883	gene	gene3102	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3257
BFO_3258	BFO_3258		BFO_3258	3287955	3289307	+	MATE efflux family protein	identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797	gene	gene3103	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3258
BFO_3259	BFO_3259		BFO_3259	3289367	3289576	+	hypothetical protein		gene	gene3104	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3259
BFO_3260	BFO_3260		BFO_3260	3289912	3290061	-	hypothetical protein		gene	gene3106	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3260
BFO_3261	BFO_3261		BFO_3261	3289554	3289925	+	RteC protein		gene	gene3105	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3261
BFO_3262	BFO_3262		BFO_3262	3290217	3290348	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3107	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3262
BFO_3263	BFO_3263		BFO_3263	3290733	3291158	+	hypothetical protein		gene	gene3108	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3263
BFO_3264	BFO_3264		BFO_3264	3291754	3293004	+	hypothetical protein		gene	gene3109	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3264
BFO_3265	BFO_3265		BFO_3265	3293020	3293877	+	hypothetical protein		gene	gene3110	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3265
BFO_3266	BFO_3266		BFO_3266	3293874	3297083	+	hypothetical protein		gene	gene3111	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3266
BFO_3267	BFO_3267		BFO_3267	3297080	3298186	+	hypothetical protein		gene	gene3112	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3267
BFO_3268	BFO_3268		BFO_3268	3298329	3300458	+		helicase C-terminal domain protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF04851	pseudogene	gene3113	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3268
BFO_3269	BFO_3269		BFO_3269	3300465	3300698	+	hypothetical protein	overlaps another CDS with the same product name	gene	gene3114	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3269
BFO_3270	BFO_3270		BFO_3270	3300695	3302848	+	hypothetical protein	overlaps another CDS with the same product name	gene	gene3115	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3270
BFO_3271	BFO_3271		BFO_3271	3302856	3303428	+	hypothetical protein		gene	gene3116	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3271
BFO_3272	BFO_3272		BFO_3272	3304163	3306679	-	hypothetical protein		gene	gene3117	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3272
BFO_3273	BFO_3273		BFO_3273	3306685	3307638	-	ATPase%2C AAA family	identified by match to protein family HMM PF00004	gene	gene3118	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3273
BFO_3274	BFO_3274		BFO_3274	3307640	3307858	-	DNA-binding helix-turn-helix protein	identified by match to protein family HMM PF01381	gene	gene3119	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3274
BFO_3275	BFO_3275		BFO_3275	3308323	3309336	+	transposase%2C IS4 family	identified by match to protein family HMM PF01609	gene	gene3120	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3275
BFO_3276	BFO_3276		BFO_3276	3309557	3310258	-		conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene3121	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3276
BFO_3277	BFO_3277		BFO_3277	3310268	3310531	-		conserved domain protein%3B this gene contains a premature stop which may be the result of a sequencing error	pseudogene	gene3122	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3277
BFO_3278	BFO_3278		BFO_3278	3311293	3312666	-	transposase%2C IS116/IS110/IS902 family	identified by match to protein family HMM PF02371	gene	gene3123	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3278
BFO_3280	BFO_3280		BFO_3280	3312714	3313781	-	integrase family protein		gene	gene3124	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3280
BFO_3281	BFO_3281		BFO_3281	3314119	3314195	-	tRNA-Asp		tRNA	gene3125	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3281
BFO_3283	BFO_3283		BFO_3283	3314608	3316620	+	TonB-dependent receptor	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715	gene	gene3126	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3283
BFO_3284	BFO_3284		BFO_3284	3316657	3317757	+	putative lipoprotein		gene	gene3127	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3284
BFO_3285	BFO_3285		BFO_3285	3317780	3318919	+	putative lipoprotein		gene	gene3128	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3285
BFO_3286	BFO_3286		BFO_3286	3318922	3321633	-	hypothetical protein		gene	gene3129	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3286
BFO_3287	BFO_3287	rpmH	rpmH	3321984	3322139	+	ribosomal protein L34	identified by match to protein family HMM PF00468%3B match to protein family HMM TIGR01030	gene	gene3130	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3287
BFO_3288	BFO_3288		BFO_3288	3322251	3322919	+	PASTA domain protein	identified by match to protein family HMM PF03793	gene	gene3131	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3288
BFO_3289	BFO_3289		BFO_3289	3322910	3323998	+	pseudouridine synthase%2C RluA family	identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00005	gene	gene3132	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3289
BFO_3290	BFO_3290		BFO_3290	3324016	3325011	+	D-ala D-ala ligase N-terminal domain protein	identified by match to protein family HMM PF01820%3B match to protein family HMM PF02655%3B match to protein family HMM PF07478%3B match to protein family HMM TIGR01205	gene	gene3133	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3290
BFO_3291	BFO_3291		BFO_3291	3325064	3326230	+	acyltransferase family protein		gene	gene3134	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3291
BFO_3292	BFO_3292		BFO_3292	3326227	3326877	+	CoA binding domain protein	identified by match to protein family HMM PF02629%3B match to protein family HMM PF06971	gene	gene3135	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3292
BFO_3293	BFO_3293		BFO_3293	3326882	3327493	+	FAH family protein	identified by match to protein family HMM PF01557	gene	gene3136	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3293
BFO_3294	BFO_3294		BFO_3294	3327483	3330944	+	putative lipoprotein		gene	gene3137	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3294
BFO_3295	BFO_3295		BFO_3295	3331063	3332100	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3138	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3295
BFO_3296	BFO_3296		BFO_3296	3332321	3333130	+	hypothetical protein		gene	gene3139	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3296
BFO_3297	BFO_3297		BFO_3297	3333516	3336761	+	WD40-like protein	identified by match to protein family HMM PF00930%3B match to protein family HMM PF03572%3B match to protein family HMM PF07676	gene	gene3140	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3297
BFO_3298	BFO_3298		BFO_3298	3336916	3338727	+	glycosyl hydrolase family 2%2C sugar binding domain protein	identified by match to protein family HMM PF00703%3B match to protein family HMM PF02837	gene	gene3141	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3298
BFO_3299	BFO_3299		BFO_3299	3338740	3339891	-	endoribonuclease L-PSP	identified by match to protein family HMM PF01042	gene	gene3142	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3299
BFO_3300	BFO_3300		BFO_3300	3339888	3340676	-	hydrolase%2C carbon-nitrogen family	identified by match to protein family HMM PF00795	gene	gene3143	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3300
BFO_3301	BFO_3301		BFO_3301	3340669	3341253	-	Acyltransferase	identified by match to protein family HMM PF01553	gene	gene3144	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3301
BFO_3302	BFO_3302		BFO_3302	3341250	3341549	-	hypothetical protein		gene	gene3145	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3302
BFO_3303	BFO_3303		BFO_3303	3341702	3343357	+	starch synthase	identified by match to protein family HMM PF05693	gene	gene3146	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3303
BFO_3304	BFO_3304		BFO_3304	3343376	3344107	-	hypothetical protein		gene	gene3147	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3304
BFO_3305	BFO_3305	glgP	glgP	3344529	3347093	+	alpha-glucan phosphorylase	identified by match to protein family HMM PF00343%3B match to protein family HMM TIGR02094	gene	gene3148	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3305
BFO_3306	BFO_3306		BFO_3306	3347206	3347829	+	hypothetical protein		gene	gene3149	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3306
BFO_3307	BFO_3307		BFO_3307	3347848	3348660	+	oxidoreductase%2C short chain dehydrogenase/reductase family protein	identified by match to protein family HMM PF00106%3B match to protein family HMM PF08659	gene	gene3150	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3307
BFO_3308	BFO_3308		BFO_3308	3348694	3349761	+	carbohydrate kinase%2C PfkB family	identified by match to protein family HMM PF00294	gene	gene3151	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3308
BFO_3309	BFO_3309		BFO_3309	3349800	3351071	+	hypothetical protein		gene	gene3152	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3309
BFO_3310	BFO_3310		BFO_3310	3351093	3351428	-	hypothetical protein		gene	gene3153	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3310
BFO_3311	BFO_3311		BFO_3311	3351558	3352319	-	hypothetical protein	identified by match to protein family HMM PF03883	gene	gene3154	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3311
BFO_3312	BFO_3312		BFO_3312	3352289	3352579	-	hypothetical protein		gene	gene3155	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3312
BFO_3313	BFO_3313		BFO_3313	3352598	3352783	+	hypothetical protein		gene	gene3156	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3313
BFO_3314	BFO_3314		BFO_3314	3352780	3355983	+	TonB-linked outer membrane protein%2C SusC/RagA family	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715%3B match to protein family HMM TIGR04056	gene	gene3157	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3314
BFO_3315	BFO_3315		BFO_3315	3356017	3357657	+	SusD family protein	identified by match to protein family HMM PF07980	gene	gene3158	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3315
BFO_3316	BFO_3316	rrfB	rrfB	3357926	3358036	-	5S ribosomal RNA		rRNA	gene3159	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3316
BFO_3317	BFO_3317	rrlB	rrlB	3358247	3361074	-	23S ribosomal RNA		rRNA	gene3160	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3317
BFO_3318	BFO_3318		BFO_3318	3361208	3361339	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3161	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3318
BFO_3319	BFO_3319		BFO_3319	3361363	3361439	-	tRNA-Ala		tRNA	gene3162	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3319
BFO_3320	BFO_3320		BFO_3320	3361522	3361595	-	tRNA-Ile		tRNA	gene3163	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3320
BFO_3321	BFO_3321	rrsB	rrsB	3361853	3363303	-	16S ribosomal RNA		rRNA	gene3164	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3321
BFO_3322	BFO_3322		BFO_3322	3363476	3363838	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3165	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3322
BFO_3323	BFO_3323		BFO_3323	3363884	3366340	-	TonB-dependent receptor	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715	gene	gene3166	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3323
BFO_3324	BFO_3324		BFO_3324	3366407	3366922	-	putative 3-deoxy-manno-octulosonate-8-phosphatase	identified by match to protein family HMM TIGR01662%3B match to protein family HMM TIGR01670	gene	gene3167	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3324
BFO_3325	BFO_3325		BFO_3325	3366928	3367692	-	hypothetical protein		gene	gene3168	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3325
BFO_3326	BFO_3326		BFO_3326	3367689	3368252	-	nitroreductase family protein	identified by match to protein family HMM PF00881	gene	gene3169	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3326
BFO_3327	BFO_3327	mdsC	mdsC	3368554	3369642	-	mucin-desulfating sulfatase	identified by match to protein family HMM PF01636	gene	gene3170	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3327
BFO_3328	BFO_3328	rpmE	rpmE	3369721	3370134	-	ribosomal protein L31	identified by match to protein family HMM PF01197%3B match to protein family HMM TIGR00105	gene	gene3171	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3328
BFO_3329	BFO_3329	fba	fba	3370133	3371194	+	fructose-1%2C6-bisphosphate aldolase%2C class II	identified by match to protein family HMM PF01116%3B match to protein family HMM TIGR00167%3B match to protein family HMM TIGR01859	gene	gene3172	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3329
BFO_3330	BFO_3330	radA	radA	3371388	3372758	+	DNA repair protein RadA	identified by match to protein family HMM TIGR00416	gene	gene3173	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3330
BFO_3331	BFO_3331		BFO_3331	3372761	3373120	+	nucleotidyltransferase domain protein	identified by match to protein family HMM PF01909	gene	gene3174	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3331
BFO_3332	BFO_3332		BFO_3332	3373104	3373448	+	putative toxin-antitoxin system%2C antitoxin component	identified by match to protein family HMM PF01934	gene	gene3175	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3332
BFO_3333	BFO_3333		BFO_3333	3373624	3373743	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3176	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3333
BFO_3334	BFO_3334		BFO_3334	3373744	3374883	+	putative lipoprotein		gene	gene3177	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3334
BFO_3335	BFO_3335		BFO_3335	3376546	3376692	-	hypothetical protein	identified by glimmer%3B putative	gene	gene3179	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3335
BFO_3336	BFO_3336		BFO_3336	3374969	3376555	+	FAD dependent oxidoreductase	identified by match to protein family HMM PF01266	gene	gene3178	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3336
BFO_3337	BFO_3337		BFO_3337	3376752	3377000	-	hypothetical protein		gene	gene3180	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3337
BFO_3338	BFO_3338		BFO_3338	3377422	3378000	-	nodulation protein L	identified by match to protein family HMM PF00132	gene	gene3181	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3338
BFO_3339	BFO_3339		BFO_3339	3377990	3379180	-	putative 23S rRNA m5C1962 methyltransferase	identified by match to protein family HMM PF02475	gene	gene3182	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3339
BFO_3340	BFO_3340		BFO_3340	3379177	3379773	-	3'-5' exonuclease	identified by match to protein family HMM PF01612	gene	gene3183	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3340
BFO_3341	BFO_3341		BFO_3341	3379770	3380309	-	hypothetical protein		gene	gene3184	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3341
BFO_3342	BFO_3342	fabD	fabD	3380314	3381195	-	[acyl-carrier-protein] S-malonyltransferase	identified by match to protein family HMM PF00698%3B match to protein family HMM TIGR00128	gene	gene3185	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3342
BFO_3343	BFO_3343		BFO_3343	3381326	3381523	+	twin arginine-targeting protein%2C translocase%2C TatA/E family	identified by match to protein family HMM PF02416%3B match to protein family HMM TIGR01411	gene	gene3186	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3343
BFO_3344	BFO_3344		BFO_3344	3381539	3382390	+	putative twin arginine-targeting protein translocase TatC	identified by match to protein family HMM PF00902	gene	gene3187	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3344
BFO_3345	BFO_3345		BFO_3345	3382395	3384821	+	transglycosylase	identified by match to protein family HMM PF00905%3B match to protein family HMM PF00912	gene	gene3188	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3345
BFO_3346	BFO_3346	dnaB	dnaB	3384918	3386453	+	replicative DNA helicase	identified by match to protein family HMM PF00772%3B match to protein family HMM PF03796%3B match to protein family HMM TIGR00665	gene	gene3189	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3346
BFO_3347	BFO_3347		BFO_3347	3386472	3387152	-	hypothetical protein	identified by match to protein family HMM PF06439	gene	gene3190	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3347
BFO_3348	BFO_3348		BFO_3348	3387156	3388841	-	ATP-binding cassette protein%2C ChvD family	identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR03719	gene	gene3191	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3348
BFO_3349	BFO_3349		BFO_3349	3388964	3389086	+	hypothetical protein	identified by glimmer%3B putative	gene	gene3192	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3349
BFO_3350	BFO_3350		BFO_3350	3389091	3390614	+	putative phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	identified by match to protein family HMM PF01808%3B match to protein family HMM PF02142	gene	gene3193	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3350
BFO_3351	BFO_3351	mbl	mbl	3390652	3391671	+	Mbl protein	identified by match to protein family HMM PF02491%3B match to protein family HMM PF06723%3B match to protein family HMM TIGR00904	gene	gene3194	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3351
BFO_3352	BFO_3352	mreC	mreC	3391744	3392595	+	rod shape-determining protein MreC	identified by match to protein family HMM PF04085%3B match to protein family HMM TIGR00219	gene	gene3195	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3352
BFO_3353	BFO_3353	mreD	mreD	3392588	3393106	+	rod shape-determining protein MreD	identified by match to protein family HMM TIGR03426	gene	gene3196	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3353
BFO_3354	BFO_3354	mrdA	mrdA	3393093	3394955	+	penicillin-binding protein 2	identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717%3B match to protein family HMM TIGR03423	gene	gene3197	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3354
BFO_3355	BFO_3355		BFO_3355	3394945	3396390	+	putative rod shape-determining protein RodA	identified by match to protein family HMM PF01098	gene	gene3198	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3355
BFO_3356	BFO_3356	lysS	lysS	3396445	3398277	+	lysine--tRNA ligase	identified by match to protein family HMM PF00152%3B match to protein family HMM PF01336%3B match to protein family HMM TIGR00499	gene	gene3199	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3356
BFO_3357	BFO_3357		BFO_3357	3398309	3399307	+	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminal domain protein	identified by match to protein family HMM PF01210%3B match to protein family HMM PF07479	gene	gene3200	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3357
BFO_3358	BFO_3358	pgi	pgi	3399349	3400695	+	glucose-6-phosphate isomerase	identified by match to protein family HMM PF00342	gene	gene3201	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3358
BFO_3359	BFO_3359		BFO_3359	3400807	3402330	-	hypothetical protein		gene	gene3202	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3359
BFO_3360	BFO_3360	rpsF	rpsF	3402449	3402805	+	ribosomal protein S6	identified by match to protein family HMM PF01250%3B match to protein family HMM TIGR00166	gene	gene3203	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3360
BFO_3361	BFO_3361	rpsR	rpsR	3402808	3403092	+	ribosomal protein S18	identified by match to protein family HMM PF01084%3B match to protein family HMM TIGR00165	gene	gene3204	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3361
BFO_3362	BFO_3362	rplI	rplI	3403113	3403559	+	ribosomal protein L9	identified by match to protein family HMM PF01281%3B match to protein family HMM PF03948%3B match to protein family HMM TIGR00158	gene	gene3205	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3362
BFO_3363	BFO_3363		BFO_3363	3403665	3404807	+	N-acetylmuramoyl-L-alanine amidase	identified by match to protein family HMM PF01520	gene	gene3206	http://www.ncbi.nlm.nih.gov/gene/?term=BFO_3363