B6V88_00005 PF00308 Bacterial dnaA protein B6V88_00005 PF08299 Bacterial dnaA protein helix-turn-helix B6V88_00005 PF11638 DnaA N-terminal domain B6V88_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain B6V88_00010 PF02767 DNA polymerase III beta subunit, central domain B6V88_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain B6V88_00015 PF02463 RecF/RecN/SMC N terminal domain B6V88_00020 PF01061 B6V88_00020 B6V88_00025 PF00005 ABC transporter B6V88_00030 PF00204 DNA gyrase B B6V88_00030 PF00986 DNA gyrase B subunit, carboxyl terminus B6V88_00030 PF01751 Toprim domain B6V88_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B6V88_00040 PF17209 B6V88_00040 B6V88_00045 PF01926 50S ribosome-binding GTPase B6V88_00045 PF13167 B6V88_00045 B6V88_00045 PF16360 B6V88_00045 B6V88_00055 PF00578 AhpC/TSA family B6V88_00060 PF02678 Pirin B6V88_00060 PF05726 Pirin C-terminal cupin domain B6V88_00065 PF03358 NADPH-dependent FMN reductase B6V88_00070 PF01925 B6V88_00070 B6V88_00075 PF04751 Protein of unknown function (DUF615) B6V88_00080 PF01170 Putative RNA methylase family UPF0020 B6V88_00080 PF02926 THUMP domain B6V88_00080 PF10672 S-adenosylmethionine-dependent methyltransferase B6V88_00085 PF06127 B6V88_00085 B6V88_00090 PF02537 B6V88_00090 B6V88_00095 PF00933 Glycosyl hydrolase family 3 N terminal domain B6V88_00110 PF03352 Methyladenine glycosylase B6V88_00115 PF16307 B6V88_00115 B6V88_00120 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP B6V88_00125 PF13520 Amino acid permease B6V88_00130 PF06055 B6V88_00130 B6V88_00135 PF01384 B6V88_00135 B6V88_00140 PF00571 CBS domain B6V88_00140 PF01595 B6V88_00140 B6V88_00140 PF03471 Transporter associated domain B6V88_00145 PF03232 B6V88_00145 B6V88_00165 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily B6V88_00175 PF00620 RhoGAP domain B6V88_00180 PF01610 B6V88_00180 B6V88_00180 PF13542 B6V88_00180 B6V88_00180 PF14690 B6V88_00180 B6V88_00185 PF01610 B6V88_00185 B6V88_00185 PF13542 B6V88_00185 B6V88_00185 PF14690 B6V88_00185 B6V88_00190 PF14860 DrrA phosphatidylinositol 4-phosphate binding domain B6V88_00200 PF00155 Aminotransferase class I and II B6V88_00205 PF00271 Helicase conserved C-terminal domain B6V88_00205 PF02151 UvrB/uvrC motif B6V88_00205 PF04851 Type III restriction enzyme, res subunit B6V88_00205 PF12344 Ultra-violet resistance protein B B6V88_00215 PF05164 Cell division protein ZapA B6V88_00220 PF03695 Uncharacterised protein family (UPF0149) B6V88_00230 PF01494 FAD binding domain B6V88_00235 PF01494 FAD binding domain B6V88_00255 PF02321 Outer membrane efflux protein B6V88_00260 PF16576 B6V88_00260 B6V88_00265 PF00005 ABC transporter B6V88_00270 PF02687 B6V88_00270 B6V88_00270 PF12704 MacB-like periplasmic core domain B6V88_00275 PF00248 Aldo/keto reductase family B6V88_00295 PF03831 PhnA protein B6V88_00295 PF08274 PhnA Zinc-Ribbon B6V88_00320 PF02592 B6V88_00320 B6V88_00330 PF13406 Transglycosylase SLT domain B6V88_00335 PF01625 Peptide methionine sulfoxide reductase B6V88_00335 PF01641 SelR domain B6V88_00340 PF07043 B6V88_00340 B6V88_00350 PF02416 mttA/Hcf106 family B6V88_00355 PF02416 mttA/Hcf106 family B6V88_00360 PF03109 B6V88_00360 B6V88_00365 PF02036 SCP-2 sterol transfer family B6V88_00370 PF01209 ubiE/COQ5 methyltransferase family B6V88_00375 PF08173 B6V88_00375 B6V88_00380 PF02322 B6V88_00380 B6V88_00385 PF01654 B6V88_00385 B6V88_00390 PF00027 Cyclic nucleotide-binding domain B6V88_00390 PF13545 Crp-like helix-turn-helix domain B6V88_00405 PF08897 B6V88_00405 B6V88_00420 PF01810 B6V88_00420 B6V88_00425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B6V88_00425 PF03466 LysR substrate binding domain B6V88_00430 PF02633 Creatinine amidohydrolase B6V88_00435 PF01569 PAP2 superfamily B6V88_00440 PF01494 FAD binding domain B6V88_00445 PF03734 L,D-transpeptidase catalytic domain B6V88_00450 PF02631 RecX family B6V88_00460 PF00116 Cytochrome C oxidase subunit II, periplasmic domain B6V88_00460 PF02790 Cytochrome C oxidase subunit II, transmembrane domain B6V88_00460 PF13442 Cytochrome C oxidase, cbb3-type, subunit III B6V88_00470 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 B6V88_00475 PF00510 Cytochrome c oxidase subunit III B6V88_00485 PF02195 ParB-like nuclease domain B6V88_00490 PF13614 AAA domain B6V88_00495 PF02527 rRNA small subunit methyltransferase G B6V88_00500 PF01134 Glucose inhibited division protein A B6V88_00500 PF13932 GidA associated domain 3 B6V88_00510 PF06508 Queuosine biosynthesis protein QueC B6V88_00520 PF01588 Putative tRNA binding domain B6V88_00520 PF09334 tRNA synthetases class I (M) B6V88_00525 PF04060 Putative Fe-S cluster B6V88_00525 PF14697 4Fe-4S dicluster domain B6V88_00530 PF00633 Helix-hairpin-helix motif B6V88_00530 PF00730 HhH-GPD superfamily base excision DNA repair protein B6V88_00540 PF01447 Thermolysin metallopeptidase, catalytic domain B6V88_00540 PF02868 Thermolysin metallopeptidase, alpha-helical domain B6V88_00540 PF03413 Peptidase propeptide and YPEB domain B6V88_00540 PF07504 Fungalysin/Thermolysin Propeptide Motif B6V88_00545 PF00132 Bacterial transferase hexapeptide (six repeats) B6V88_00555 PF01544 CorA-like Mg2+ transporter protein B6V88_00560 PF02592 B6V88_00560 B6V88_00565 PF00132 Bacterial transferase hexapeptide (six repeats) B6V88_00565 PF12804 MobA-like NTP transferase domain B6V88_00565 PF14602 Hexapeptide repeat of succinyl-transferase B6V88_00575 PF00710 Asparaginase B6V88_00580 PF00293 NUDIX domain B6V88_00585 PF00391 PEP-utilising enzyme, mobile domain B6V88_00585 PF02896 PEP-utilising enzyme, TIM barrel domain B6V88_00585 PF05524 PEP-utilising enzyme, N-terminal B6V88_00585 PF13185 GAF domain B6V88_00590 PF01925 B6V88_00590 B6V88_00595 PF01790 B6V88_00595 B6V88_00600 PF00303 Thymidylate synthase B6V88_00605 PF07947 B6V88_00605 B6V88_00615 PF00293 NUDIX domain B6V88_00615 PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal B6V88_00620 PF01323 DSBA-like thioredoxin domain B6V88_00625 PF00034 Cytochrome c B6V88_00625 PF13442 Cytochrome C oxidase, cbb3-type, subunit III B6V88_00630 PF01926 50S ribosome-binding GTPase B6V88_00635 PF04493 Endonuclease V B6V88_00640 PF02441 Flavoprotein B6V88_00645 PF00501 AMP-binding enzyme B6V88_00645 PF13193 AMP-binding enzyme C-terminal domain B6V88_00645 PF16177 B6V88_00645 B6V88_00650 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase B6V88_00650 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase B6V88_00655 PF00171 Aldehyde dehydrogenase family B6V88_00670 PF01113 Dihydrodipicolinate reductase, N-terminus B6V88_00670 PF05173 Dihydrodipicolinate reductase, C-terminus B6V88_00685 PF13279 Thioesterase-like superfamily B6V88_00695 PF01242 6-pyruvoyl tetrahydropterin synthase B6V88_00700 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase B6V88_00705 PF13561 Enoyl-(Acyl carrier protein) reductase B6V88_00710 PF03350 B6V88_00710 B6V88_00715 PF01207 Dihydrouridine synthase (Dus) B6V88_00725 PF07726 ATPase family associated with various cellular activities (AAA) B6V88_00730 PF01882 B6V88_00730 B6V88_00735 PF14316 B6V88_00735 B6V88_00740 PF00092 von Willebrand factor type A domain B6V88_00745 PF13519 von Willebrand factor type A domain B6V88_00750 PF00515 Tetratricopeptide repeat B6V88_00755 PF13584 B6V88_00755 B6V88_00765 PF00313 'Cold-shock' DNA-binding domain B6V88_00770 PF00445 Ribonuclease T2 family B6V88_00775 PF01636 Phosphotransferase enzyme family B6V88_00780 PF02639 B6V88_00780 B6V88_00785 PF10988 Protein of unknown function (DUF2807) B6V88_00790 PF12697 Alpha/beta hydrolase family B6V88_00800 PF00478 IMP dehydrogenase / GMP reductase domain B6V88_00805 PF02562 PhoH-like protein B6V88_00805 PF13638 PIN domain B6V88_00810 PF00578 AhpC/TSA family B6V88_00815 PF01668 SmpB protein B6V88_00820 PF01380 SIS domain B6V88_00820 PF13522 Glutamine amidotransferase domain B6V88_00825 PF00575 S1 RNA binding domain B6V88_00825 PF09371 Tex-like protein N-terminal domain B6V88_00825 PF12836 Helix-hairpin-helix motif B6V88_00825 PF16921 B6V88_00825 B6V88_00830 PF03061 Thioesterase superfamily B6V88_00845 PF00596 Class II Aldolase and Adducin N-terminal domain B6V88_00850 PF01569 PAP2 superfamily B6V88_00865 PF00583 Acetyltransferase (GNAT) family B6V88_00875 PF02463 RecF/RecN/SMC N terminal domain B6V88_00880 PF01513 ATP-NAD kinase B6V88_00885 PF03070 TENA/THI-4/PQQC family B6V88_00895 PF00009 Elongation factor Tu GTP binding domain B6V88_00895 PF00679 Elongation factor G C-terminus B6V88_00895 PF03144 Elongation factor Tu domain 2 B6V88_00900 PF00612 IQ calmodulin-binding motif B6V88_00905 PF05525 B6V88_00905 B6V88_00910 PF00067 Cytochrome P450 B6V88_00925 PF03594 B6V88_00925 B6V88_00930 PF03133 Tubulin-tyrosine ligase family B6V88_00950 PF09587 Bacterial capsule synthesis protein PGA_cap B6V88_00955 PF01430 Hsp33 protein B6V88_00960 PF00580 UvrD/REP helicase N-terminal domain B6V88_00960 PF13361 UvrD-like helicase C-terminal domain B6V88_00980 PF04389 Peptidase family M28 B6V88_00990 PF04293 B6V88_00990 B6V88_00995 PF04285 B6V88_00995 B6V88_01000 PF06798 B6V88_01000 B6V88_01000 PF08298 PrkA AAA domain B6V88_01005 PF01433 Peptidase family M1 B6V88_01005 PF11940 Domain of unknown function (DUF3458) B6V88_01005 PF17432 B6V88_01005 B6V88_01010 PF01488 Shikimate / quinate 5-dehydrogenase B6V88_01010 PF08501 Shikimate dehydrogenase substrate binding domain B6V88_01020 PF01734 Patatin-like phospholipase B6V88_01030 PF00854 POT family B6V88_01040 PF00308 Bacterial dnaA protein B6V88_01045 PF01066 CDP-alcohol phosphatidyltransferase B6V88_01050 PF04183 IucA / IucC family B6V88_01050 PF06276 Ferric iron reductase FhuF-like transporter B6V88_01055 PF01985 CRS1 / YhbY (CRM) domain B6V88_01060 PF01728 FtsJ-like methyltransferase B6V88_01065 PF00004 ATPase family associated with various cellular activities (AAA) B6V88_01065 PF01434 Peptidase family M41 B6V88_01065 PF06480 FtsH Extracellular B6V88_01070 PF00809 Pterin binding enzyme B6V88_01075 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain B6V88_01075 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I B6V88_01075 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II B6V88_01075 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III B6V88_01080 PF00121 Triosephosphate isomerase B6V88_01085 PF03840 Preprotein translocase SecG subunit B6V88_01095 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 B6V88_01100 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit B6V88_01105 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit B6V88_01110 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit B6V88_01115 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin B6V88_01120 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit B6V88_01120 PF10531 SLBB domain B6V88_01120 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region B6V88_01125 PF00384 Molybdopterin oxidoreductase B6V88_01125 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region B6V88_01125 PF13510 2Fe-2S iron-sulfur cluster binding domain B6V88_01130 PF00146 NADH dehydrogenase B6V88_01135 PF12838 4Fe-4S dicluster domain B6V88_01140 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 B6V88_01145 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L B6V88_01150 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains B6V88_01150 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus B6V88_01155 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains B6V88_01160 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains B6V88_01170 PF02576 Uncharacterised BCR, YhbC family COG0779 B6V88_01170 PF17384 B6V88_01170 B6V88_01175 PF00575 S1 RNA binding domain B6V88_01175 PF08529 NusA N-terminal domain B6V88_01175 PF13184 NusA-like KH domain B6V88_01175 PF14520 Helix-hairpin-helix domain B6V88_01180 PF00009 Elongation factor Tu GTP binding domain B6V88_01180 PF04760 Translation initiation factor IF-2, N-terminal region B6V88_01180 PF08364 B6V88_01180 B6V88_01180 PF11987 Translation-initiation factor 2 B6V88_01185 PF02033 Ribosome-binding factor A B6V88_01190 PF01509 TruB family pseudouridylate synthase (N terminal domain) B6V88_01190 PF09157 Pseudouridine synthase II TruB, C-terminal B6V88_01190 PF16198 B6V88_01190 B6V88_01195 PF00312 Ribosomal protein S15 B6V88_01200 PF00013 KH domain B6V88_01200 PF00575 S1 RNA binding domain B6V88_01200 PF01138 3' exoribonuclease family, domain 1 B6V88_01200 PF03725 3' exoribonuclease family, domain 2 B6V88_01200 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain B6V88_01210 PF01227 GTP cyclohydrolase I B6V88_01215 PF01230 HIT domain B6V88_01220 PF00719 Inorganic pyrophosphatase B6V88_01225 PF00999 Sodium/hydrogen exchanger family B6V88_01225 PF02254 TrkA-N domain B6V88_01235 PF13520 Amino acid permease B6V88_01245 PF00563 EAL domain B6V88_01245 PF00990 GGDEF domain B6V88_01245 PF13188 PAS domain B6V88_01250 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain B6V88_01250 PF02785 Biotin carboxylase C-terminal domain B6V88_01250 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain B6V88_01255 PF02569 Pantoate-beta-alanine ligase B6V88_01260 PF02548 Ketopantoate hydroxymethyltransferase B6V88_01270 PF03969 AFG1-like ATPase B6V88_01275 PF00873 AcrB/AcrD/AcrF family B6V88_01285 PF02321 Outer membrane efflux protein B6V88_01290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain B6V88_01290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain B6V88_01295 PF04023 FeoA domain B6V88_01300 PF02421 Ferrous iron transport protein B B6V88_01300 PF07664 B6V88_01300 B6V88_01300 PF07670 Nucleoside recognition B6V88_01305 PF09012 FeoC like transcriptional regulator B6V88_01315 PF08668 HDOD domain B6V88_01320 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit B6V88_01330 PF00890 FAD binding domain B6V88_01330 PF02910 Fumarate reductase flavoprotein C-term B6V88_01335 PF13085 2Fe-2S iron-sulfur cluster binding domain B6V88_01335 PF13534 4Fe-4S dicluster domain B6V88_01340 PF00676 Dehydrogenase E1 component B6V88_01340 PF02779 Transketolase, pyrimidine binding domain B6V88_01340 PF16078 B6V88_01340 B6V88_01340 PF16870 B6V88_01340 B6V88_01345 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) B6V88_01345 PF00364 Biotin-requiring enzyme B6V88_01345 PF02817 e3 binding domain B6V88_01350 PF00549 CoA-ligase B6V88_01350 PF08442 ATP-grasp domain B6V88_01355 PF00549 CoA-ligase B6V88_01355 PF02629 CoA binding domain B6V88_01360 PF00106 short chain dehydrogenase B6V88_01370 PF01327 Polypeptide deformylase B6V88_01380 PF01243 Pyridoxamine 5'-phosphate oxidase B6V88_01380 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region B6V88_01390 PF07179 B6V88_01390 B6V88_01395 PF07690 Major Facilitator Superfamily B6V88_01400 PF06097 B6V88_01400 B6V88_01405 PF02954 Bacterial regulatory protein, Fis family B6V88_01410 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase B6V88_01410 PF14572 Phosphoribosyl synthetase-associated domain B6V88_01425 PF03550 Outer membrane lipoprotein LolB B6V88_01430 PF01467 Cytidylyltransferase B6V88_01435 PF01019 Gamma-glutamyltranspeptidase B6V88_01440 PF01553 Acyltransferase B6V88_01445 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain B6V88_01445 PF06827 Zinc finger found in FPG and IleRS B6V88_01445 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain B6V88_01455 PF00487 B6V88_01455 B6V88_01455 PF01610 B6V88_01455 B6V88_01460 PF13561 Enoyl-(Acyl carrier protein) reductase B6V88_01465 PF13561 Enoyl-(Acyl carrier protein) reductase B6V88_01470 PF07879 B6V88_01470 B6V88_01475 PF09361 B6V88_01475 B6V88_01480 PF09361 B6V88_01480 B6V88_01485 PF00561 alpha/beta hydrolase fold B6V88_01485 PF07167 B6V88_01485 B6V88_01495 PF02463 RecF/RecN/SMC N terminal domain B6V88_01495 PF06470 SMC proteins Flexible Hinge Domain B6V88_01500 PF04354 ZipA, C-terminal FtsZ-binding domain B6V88_01505 PF01225 Mur ligase family, catalytic domain B6V88_01505 PF02875 Mur ligase family, glutamate ligase domain B6V88_01505 PF08245 Mur ligase middle domain B6V88_01515 PF02875 Mur ligase family, glutamate ligase domain B6V88_01515 PF08245 Mur ligase middle domain B6V88_01520 PF01098 B6V88_01520 B6V88_01525 PF01225 Mur ligase family, catalytic domain B6V88_01525 PF02875 Mur ligase family, glutamate ligase domain B6V88_01525 PF08245 Mur ligase middle domain B6V88_01530 PF01565 FAD binding domain B6V88_01530 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain B6V88_01535 PF01820 D-ala D-ala ligase N-terminus B6V88_01535 PF07478 D-ala D-ala ligase C-terminus B6V88_01540 PF03799 Cell division protein FtsQ B6V88_01540 PF08478 POTRA domain, FtsQ-type B6V88_01545 PF02491 SHS2 domain inserted in FTSA B6V88_01545 PF14450 Cell division protein FtsA B6V88_01555 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase B6V88_01560 PF05258 B6V88_01560 B6V88_01565 PF03703 B6V88_01565 B6V88_01570 PF01636 Phosphotransferase enzyme family B6V88_01575 PF01212 Beta-eliminating lyase B6V88_01585 PF13419 Haloacid dehalogenase-like hydrolase B6V88_01590 PF01131 DNA topoisomerase B6V88_01590 PF01396 B6V88_01590 B6V88_01590 PF01751 Toprim domain B6V88_01595 PF04361 B6V88_01595 B6V88_01600 PF02481 DNA recombination-mediator protein A B6V88_01610 PF00551 Formyl transferase B6V88_01610 PF02911 Formyl transferase, C-terminal domain B6V88_01615 PF01029 NusB family B6V88_01615 PF01189 NOL1/NOP2/sun family B6V88_01615 PF17125 B6V88_01615 B6V88_01620 PF02517 CAAX protease self-immunity B6V88_01630 PF02195 ParB-like nuclease domain B6V88_01635 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family B6V88_01645 PF00892 EamA-like transporter family B6V88_01650 PF01427 D-ala-D-ala dipeptidase B6V88_01660 PF00581 Rhodanese-like domain B6V88_01670 PF01312 FlhB HrpN YscU SpaS Family B6V88_01675 PF02120 Flagellar hook-length control protein FliK B6V88_01680 PF00676 Dehydrogenase E1 component B6V88_01680 PF02779 Transketolase, pyrimidine binding domain B6V88_01680 PF02780 Transketolase, C-terminal domain B6V88_01685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B6V88_01685 PF02770 Acyl-CoA dehydrogenase, middle domain B6V88_01685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B6V88_01705 PF01610 B6V88_01705 B6V88_01705 PF13542 B6V88_01705 B6V88_01705 PF14690 B6V88_01705 B6V88_01715 PF00881 Nitroreductase family B6V88_01730 PF07813 LTXXQ motif family protein B6V88_01735 PF01757 B6V88_01735 B6V88_01740 PF00107 Zinc-binding dehydrogenase B6V88_01740 PF08240 Alcohol dehydrogenase GroES-like domain B6V88_01745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B6V88_01745 PF05230 B6V88_01745 B6V88_01750 PF00072 Response regulator receiver domain B6V88_01750 PF00211 Adenylate and Guanylate cyclase catalytic domain B6V88_01755 PF07690 Major Facilitator Superfamily B6V88_01760 PF07690 Major Facilitator Superfamily B6V88_01765 PF01676 Metalloenzyme superfamily B6V88_01770 PF01475 Ferric uptake regulator family B6V88_01775 PF00227 Proteasome subunit B6V88_01780 PF00004 ATPase family associated with various cellular activities (AAA) B6V88_01780 PF07724 AAA domain (Cdc48 subfamily) B6V88_01790 PF08443 RimK-like ATP-grasp domain B6V88_01800 PF13583 Metallo-peptidase family M12B Reprolysin-like B6V88_01805 PF13505 Outer membrane protein beta-barrel domain B6V88_01810 PF00916 B6V88_01810 B6V88_01810 PF01740 STAS domain B6V88_01820 PF03960 ArsC family B6V88_01825 PF03358 NADPH-dependent FMN reductase B6V88_01830 PF03372 Endonuclease/Exonuclease/phosphatase family B6V88_01835 PF03372 Endonuclease/Exonuclease/phosphatase family B6V88_01840 PF01197 Ribosomal protein L31 B6V88_01845 PF00390 Malic enzyme, N-terminal domain B6V88_01845 PF03949 Malic enzyme, NAD binding domain B6V88_01850 PF07690 Major Facilitator Superfamily B6V88_01855 PF07690 Major Facilitator Superfamily B6V88_01860 PF02086 D12 class N6 adenine-specific DNA methyltransferase B6V88_01865 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) B6V88_01870 PF03222 Tryptophan/tyrosine permease family B6V88_01875 PF03222 Tryptophan/tyrosine permease family B6V88_01880 PF00691 OmpA family B6V88_01890 PF07313 Protein of unknown function (DUF1460) B6V88_01895 PF07670 Nucleoside recognition B6V88_01900 PF07670 Nucleoside recognition B6V88_01905 PF00583 Acetyltransferase (GNAT) family B6V88_01910 PF01551 Peptidase family M23 B6V88_01915 PF00579 tRNA synthetases class I (W and Y) B6V88_01940 PF03193 Protein of unknown function, DUF258 B6V88_01945 PF01743 Poly A polymerase head domain B6V88_01945 PF01966 HD domain B6V88_01945 PF12627 Probable RNA and SrmB- binding site of polymerase A B6V88_01950 PF00929 Exonuclease B6V88_01955 PF02677 B6V88_01955 B6V88_01960 PF01545 Cation efflux family B6V88_01970 PF01152 Bacterial-like globin B6V88_01975 PF02082 Transcriptional regulator B6V88_01980 PF04343 B6V88_01980 B6V88_01985 PF03848 Tellurite resistance protein TehB B6V88_01985 PF09313 Domain of unknown function (DUF1971) B6V88_01990 PF07219 B6V88_01990 B6V88_01995 PF04375 B6V88_01995 B6V88_02000 PF02602 Uroporphyrinogen-III synthase HemD B6V88_02005 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain B6V88_02005 PF03900 Porphobilinogen deaminase, C-terminal domain B6V88_02010 PF00657 GDSL-like Lipase/Acylhydrolase B6V88_02020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B6V88_02025 PF00072 Response regulator receiver domain B6V88_02030 PF00155 Aminotransferase class I and II B6V88_02035 PF10101 B6V88_02035 B6V88_02040 PF03060 Nitronate monooxygenase B6V88_02045 PF13442 Cytochrome C oxidase, cbb3-type, subunit III B6V88_02050 PF02600 Disulfide bond formation protein DsbB B6V88_02060 PF01702 Queuine tRNA-ribosyltransferase B6V88_02065 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD B6V88_02070 PF03458 B6V88_02070 B6V88_02080 PF00144 Beta-lactamase B6V88_02085 PF00892 EamA-like transporter family B6V88_02095 PF00083 Sugar (and other) transporter B6V88_02095 PF07690 Major Facilitator Superfamily B6V88_02105 PF01381 Helix-turn-helix B6V88_02115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) B6V88_02115 PF02824 TGS domain B6V88_02115 PF03129 Anticodon binding domain B6V88_02115 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain B6V88_02120 PF00707 Translation initiation factor IF-3, C-terminal domain B6V88_02120 PF05198 Translation initiation factor IF-3, N-terminal domain B6V88_02125 PF01632 Ribosomal protein L35 B6V88_02130 PF00453 Ribosomal protein L20 B6V88_02135 PF01409 tRNA synthetases class II core domain (F) B6V88_02135 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain B6V88_02140 PF01588 Putative tRNA binding domain B6V88_02140 PF03147 Ferredoxin-fold anticodon binding domain B6V88_02140 PF03483 B3/4 domain B6V88_02140 PF03484 tRNA synthetase B5 domain B6V88_02145 PF00216 Bacterial DNA-binding protein B6V88_02150 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin B6V88_02155 PF00572 Ribosomal protein L13 B6V88_02160 PF00380 Ribosomal protein S9/S16 B6V88_02165 PF00355 Rieske [2Fe-2S] domain B6V88_02165 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal B6V88_02170 PF00032 Cytochrome b(C-terminal)/b6/petD B6V88_02170 PF00033 Cytochrome b(N-terminal)/b6/petB B6V88_02175 PF02167 Cytochrome C1 family B6V88_02180 PF00043 Glutathione S-transferase, C-terminal domain B6V88_02180 PF02798 Glutathione S-transferase, N-terminal domain B6V88_02185 PF04386 Stringent starvation protein B B6V88_02195 PF02367 Uncharacterised P-loop hydrolase UPF0079 B6V88_02200 PF01476 LysM domain B6V88_02200 PF01520 N-acetylmuramoyl-L-alanine amidase B6V88_02200 PF11741 AMIN domain B6V88_02205 PF01119 DNA mismatch repair protein, C-terminal domain B6V88_02205 PF08676 MutL C terminal dimerisation domain B6V88_02205 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B6V88_02210 PF01715 IPP transferase B6V88_02215 PF10276 Zinc-finger domain B6V88_02235 PF00196 Bacterial regulatory proteins, luxR family B6V88_02235 PF03472 Autoinducer binding domain B6V88_02240 PF00704 Glycosyl hydrolases family 18 B6V88_02255 PF08443 RimK-like ATP-grasp domain B6V88_02260 PF00682 HMGL-like B6V88_02270 PF00180 Isocitrate/isopropylmalate dehydrogenase B6V88_02295 PF01757 B6V88_02295 B6V88_02300 PF01738 Dienelactone hydrolase family B6V88_02305 PF00390 Malic enzyme, N-terminal domain B6V88_02305 PF03949 Malic enzyme, NAD binding domain B6V88_02330 PF11388 B6V88_02330 B6V88_02335 PF00255 Glutathione peroxidase B6V88_02340 PF12796 Ankyrin repeats (3 copies) B6V88_02350 PF00149 Calcineurin-like phosphoesterase B6V88_02355 PF00437 Type II/IV secretion system protein B6V88_02360 PF16932 B6V88_02360 B6V88_02365 PF16816 B6V88_02365 B6V88_02375 PF00675 Insulinase (Peptidase family M16) B6V88_02375 PF05193 Peptidase M16 inactive domain B6V88_02380 PF00675 Insulinase (Peptidase family M16) B6V88_02380 PF05193 Peptidase M16 inactive domain B6V88_02385 PF00448 SRP54-type protein, GTPase domain B6V88_02385 PF02881 SRP54-type protein, helical bundle domain B6V88_02390 PF00005 ABC transporter B6V88_02400 PF00140 Sigma-70 factor, region 1 B6V88_02400 PF04542 Sigma-70 region 2 B6V88_02400 PF04545 Sigma-70, region 4 B6V88_02420 PF00072 Response regulator receiver domain B6V88_02420 PF00512 His Kinase A (phospho-acceptor) domain B6V88_02420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B6V88_02420 PF03707 B6V88_02420 B6V88_02420 PF13426 PAS domain B6V88_02425 PF00072 Response regulator receiver domain B6V88_02430 PF00072 Response regulator receiver domain B6V88_02430 PF00990 GGDEF domain B6V88_02430 PF01627 Hpt domain B6V88_02435 PF01384 B6V88_02435 B6V88_02440 PF01865 Protein of unknown function DUF47 B6V88_02450 PF07167 B6V88_02450 B6V88_02450 PF12551 B6V88_02450 B6V88_02455 PF00113 Enolase, C-terminal TIM barrel domain B6V88_02455 PF03952 Enolase, N-terminal domain B6V88_02460 PF04977 Septum formation initiator B6V88_02465 PF00497 Bacterial extracellular solute-binding proteins, family 3 B6V88_02470 PF00288 GHMP kinases N terminal domain B6V88_02480 PF04055 Radical SAM superfamily B6V88_02480 PF13394 4Fe-4S single cluster domain B6V88_02485 PF13174 Tetratricopeptide repeat B6V88_02485 PF13432 Tetratricopeptide repeat B6V88_02485 PF16331 B6V88_02485 B6V88_02490 PF00691 OmpA family B6V88_02495 PF03886 Protein of unknown function (DUF330) B6V88_02500 PF02470 B6V88_02500 B6V88_02510 PF02405 B6V88_02510 B6V88_02515 PF01070 FMN-dependent dehydrogenase B6V88_02520 PF00368 Hydroxymethylglutaryl-coenzyme A reductase B6V88_02545 PF01610 B6V88_02545 B6V88_02550 PF01610 B6V88_02550 B6V88_02550 PF14690 B6V88_02550 B6V88_02555 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily B6V88_02570 PF05150 B6V88_02570 B6V88_02575 PF01734 Patatin-like phospholipase B6V88_02590 PF00107 Zinc-binding dehydrogenase B6V88_02590 PF08240 Alcohol dehydrogenase GroES-like domain B6V88_02600 PF00472 RF-1 domain B6V88_02605 PF14417 B6V88_02605 B6V88_02610 PF01966 HD domain B6V88_02615 PF07728 AAA domain (dynein-related subfamily) B6V88_02620 PF00571 CBS domain B6V88_02625 PF04851 Type III restriction enzyme, res subunit B6V88_02640 PF03543 Yersinia/Haemophilus virulence surface antigen B6V88_02645 PF00027 Cyclic nucleotide-binding domain B6V88_02650 PF00583 Acetyltransferase (GNAT) family B6V88_02655 PF01814 Hemerythrin HHE cation binding domain B6V88_02660 PF12833 Helix-turn-helix domain B6V88_02665 PF01927 B6V88_02665 B6V88_02665 PF14451 B6V88_02665 B6V88_02670 PF13578 Methyltransferase domain B6V88_02685 PF01522 Polysaccharide deacetylase B6V88_02690 PF13628 B6V88_02690 B6V88_02695 PF13419 Haloacid dehalogenase-like hydrolase B6V88_02705 PF16822 B6V88_02705 B6V88_02710 PF03062 B6V88_02710 B6V88_02715 PF05139 Erythromycin esterase B6V88_02745 PF07958 B6V88_02745 B6V88_02750 PF14681 Uracil phosphoribosyltransferase B6V88_02765 PF00293 NUDIX domain B6V88_02770 PF00581 Rhodanese-like domain B6V88_02775 PF01734 Patatin-like phospholipase B6V88_02775 PF12536 B6V88_02775 B6V88_02780 PF02545 Maf-like protein B6V88_02785 PF02535 B6V88_02785 B6V88_02790 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain B6V88_02790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain B6V88_02795 PF01545 Cation efflux family B6V88_02795 PF16916 B6V88_02795 B6V88_02800 PF01206 Sulfurtransferase TusA B6V88_02805 PF03054 tRNA methyl transferase B6V88_02815 PF00270 DEAD/DEAH box helicase B6V88_02815 PF00271 Helicase conserved C-terminal domain B6V88_02815 PF17191 B6V88_02815 B6V88_02820 PF01594 B6V88_02820 B6V88_02830 PF00106 short chain dehydrogenase B6V88_02835 PF01168 Alanine racemase, N-terminal domain B6V88_02835 PF14031 Putative serine dehydratase domain B6V88_02845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B6V88_02845 PF03466 LysR substrate binding domain B6V88_02850 PF00750 tRNA synthetases class I (R) B6V88_02850 PF03485 Arginyl tRNA synthetase N terminal domain B6V88_02850 PF05746 DALR anticodon binding domain B6V88_02855 PF05036 Sporulation related domain B6V88_02860 PF00122 E1-E2 ATPase B6V88_02860 PF00702 haloacid dehalogenase-like hydrolase B6V88_02865 PF02152 Dihydroneopterin aldolase B6V88_02875 PF01208 Uroporphyrinogen decarboxylase (URO-D) B6V88_02880 PF00561 alpha/beta hydrolase fold B6V88_02885 PF01734 Patatin-like phospholipase B6V88_02885 PF12796 Ankyrin repeats (3 copies) B6V88_02890 PF01474 Class-II DAHP synthetase family B6V88_02895 PF01025 GrpE B6V88_02900 PF00012 Hsp70 protein B6V88_02905 PF00226 DnaJ domain B6V88_02905 PF00684 DnaJ central domain B6V88_02905 PF01556 DnaJ C terminal domain B6V88_02910 PF00117 Glutamine amidotransferase class-I B6V88_02910 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain B6V88_02915 PF00438 S-adenosylmethionine synthetase, N-terminal domain B6V88_02915 PF02772 S-adenosylmethionine synthetase, central domain B6V88_02915 PF02773 S-adenosylmethionine synthetase, C-terminal domain B6V88_02920 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain B6V88_02920 PF05221 S-adenosyl-L-homocysteine hydrolase B6V88_02925 PF00211 Adenylate and Guanylate cyclase catalytic domain B6V88_02930 PF01757 B6V88_02930 B6V88_02935 PF00873 AcrB/AcrD/AcrF family B6V88_02940 PF16576 B6V88_02940 B6V88_02950 PF11006 B6V88_02950 B6V88_02955 PF02325 B6V88_02955 B6V88_02960 PF03807 NADP oxidoreductase coenzyme F420-dependent B6V88_02960 PF14748 Pyrroline-5-carboxylate reductase dimerisation B6V88_02965 PF01168 Alanine racemase, N-terminal domain B6V88_02970 PF01138 3' exoribonuclease family, domain 1 B6V88_02970 PF03725 3' exoribonuclease family, domain 2 B6V88_02975 PF03755 B6V88_02975 B6V88_02975 PF08340 B6V88_02975 B6V88_02980 PF00625 Guanylate kinase B6V88_02985 PF01192 RNA polymerase Rpb6 B6V88_02990 PF02824 TGS domain B6V88_02990 PF04607 Region found in RelA / SpoT proteins B6V88_02990 PF13291 ACT domain B6V88_02990 PF13328 HD domain B6V88_02995 PF01042 Endoribonuclease L-PSP B6V88_03000 PF13975 B6V88_03000 B6V88_03005 PF00005 ABC transporter B6V88_03005 PF12848 ABC transporter B6V88_03005 PF16326 B6V88_03005 B6V88_03030 PF01177 Asp/Glu/Hydantoin racemase B6V88_03035 PF00589 Phage integrase family B6V88_03060 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase B6V88_03060 PF05697 Bacterial trigger factor protein (TF) B6V88_03060 PF05698 Bacterial trigger factor protein (TF) C-terminus B6V88_03065 PF00574 Clp protease B6V88_03070 PF06689 ClpX C4-type zinc finger B6V88_03070 PF07724 AAA domain (Cdc48 subfamily) B6V88_03070 PF10431 C-terminal, D2-small domain, of ClpB protein B6V88_03075 PF00004 ATPase family associated with various cellular activities (AAA) B6V88_03075 PF02190 ATP-dependent protease La (LON) domain B6V88_03075 PF05362 Lon protease (S16) C-terminal proteolytic domain B6V88_03080 PF00216 Bacterial DNA-binding protein B6V88_03095 PF00639 PPIC-type PPIASE domain B6V88_03095 PF13624 SurA N-terminal domain B6V88_03110 PF13561 Enoyl-(Acyl carrier protein) reductase B6V88_03115 PF00485 Phosphoribulokinase / Uridine kinase family B6V88_03120 PF01713 Smr domain B6V88_03125 PF05175 Methyltransferase small domain B6V88_03135 PF01118 Semialdehyde dehydrogenase, NAD binding domain B6V88_03135 PF02774 Semialdehyde dehydrogenase, dimerisation domain B6V88_03145 PF12796 Ankyrin repeats (3 copies) B6V88_03155 PF03536 Salmonella virulence-associated 28kDa protein B6V88_03160 PF13539 D-alanyl-D-alanine carboxypeptidase B6V88_03165 PF00575 S1 RNA binding domain B6V88_03165 PF10150 Ribonuclease E/G family B6V88_03170 PF00849 RNA pseudouridylate synthase B6V88_03170 PF01479 S4 domain B6V88_03175 PF13419 Haloacid dehalogenase-like hydrolase B6V88_03180 PF01066 CDP-alcohol phosphatidyltransferase B6V88_03200 PF01507 Phosphoadenosine phosphosulfate reductase family B6V88_03215 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus B6V88_03215 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus B6V88_03220 PF02556 Preprotein translocase subunit SecB B6V88_03225 PF00462 Glutaredoxin B6V88_03230 PF00581 Rhodanese-like domain B6V88_03235 PF00805 Pentapeptide repeats (8 copies) B6V88_03240 PF01435 Peptidase family M48 B6V88_03245 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase B6V88_03250 PF16848 B6V88_03250 B6V88_03255 PF00581 Rhodanese-like domain B6V88_03265 PF08886 Glutamate-cysteine ligase B6V88_03270 PF02951 Prokaryotic glutathione synthetase, N-terminal domain B6V88_03270 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain B6V88_03275 PF01068 ATP dependent DNA ligase domain B6V88_03275 PF04679 ATP dependent DNA ligase C terminal region B6V88_03275 PF13298 DNA polymerase Ligase (LigD) B6V88_03280 PF13698 B6V88_03280 B6V88_03285 PF02627 Carboxymuconolactone decarboxylase family B6V88_03310 PF00588 SpoU rRNA Methylase family B6V88_03315 PF04333 B6V88_03315 B6V88_03320 PF02580 D-Tyr-tRNA(Tyr) deacylase B6V88_03325 PF00561 alpha/beta hydrolase fold B6V88_03330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B6V88_03330 PF03466 LysR substrate binding domain B6V88_03335 PF00107 Zinc-binding dehydrogenase B6V88_03335 PF08240 Alcohol dehydrogenase GroES-like domain B6V88_03345 PF01230 HIT domain B6V88_03350 PF01645 Conserved region in glutamate synthase B6V88_03355 PF02622 Uncharacterized ACR, COG1678 B6V88_03360 PF03652 Uncharacterised protein family (UPF0081) B6V88_03365 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain B6V88_03365 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain B6V88_03370 PF00106 short chain dehydrogenase B6V88_03375 PF13230 Glutamine amidotransferases class-II B6V88_03380 PF00027 Cyclic nucleotide-binding domain B6V88_03385 PF04107 Glutamate-cysteine ligase family 2(GCS2) B6V88_03395 PF02545 Maf-like protein B6V88_03400 PF00617 RasGEF domain B6V88_03400 PF12796 Ankyrin repeats (3 copies) B6V88_03410 PF01078 Magnesium chelatase, subunit ChlI B6V88_03410 PF13335 B6V88_03410 B6V88_03410 PF13541 Subunit ChlI of Mg-chelatase B6V88_03415 PF04380 B6V88_03415 B6V88_03425 PF01266 FAD dependent oxidoreductase B6V88_03430 PF00543 Nitrogen regulatory protein P-II B6V88_03435 PF01878 EVE domain B6V88_03440 PF01812 5-formyltetrahydrofolate cyclo-ligase family B6V88_03450 PF01063 Aminotransferase class IV B6V88_03455 PF09335 B6V88_03455 B6V88_03460 PF00501 AMP-binding enzyme B6V88_03475 PF12608 B6V88_03475 B6V88_03490 PF09475 Dot/Icm secretion system protein (dot_icm_IcmQ) B6V88_03500 PF12696 TraM recognition site of TraD and TraG B6V88_03505 PF00691 OmpA family B6V88_03515 PF11393 B6V88_03515 B6V88_03520 PF12293 B6V88_03520 B6V88_03525 PF03743 Bacterial conjugation TrbI-like protein B6V88_03525 PF13599 Pentapeptide repeats (9 copies) B6V88_03555 PF06744 B6V88_03555 B6V88_03555 PF06761 B6V88_03555 B6V88_03555 PF14331 B6V88_03555 B6V88_03560 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) B6V88_03565 PF07690 Major Facilitator Superfamily B6V88_03570 PF00578 AhpC/TSA family B6V88_03575 PF02627 Carboxymuconolactone decarboxylase family B6V88_03580 PF00072 Response regulator receiver domain B6V88_03580 PF00563 EAL domain B6V88_03580 PF00990 GGDEF domain B6V88_03580 PF12860 B6V88_03580 B6V88_03585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B6V88_03590 PF08495 B6V88_03590 B6V88_03590 PF10442 B6V88_03590 B6V88_03595 PF00724 NADH:flavin oxidoreductase / NADH oxidase family B6V88_03595 PF07992 Pyridine nucleotide-disulphide oxidoreductase B6V88_03600 PF00270 DEAD/DEAH box helicase B6V88_03600 PF00271 Helicase conserved C-terminal domain B6V88_03600 PF03880 DbpA RNA binding domain B6V88_03610 PF07690 Major Facilitator Superfamily B6V88_03615 PF00196 Bacterial regulatory proteins, luxR family B6V88_03620 PF13474 SnoaL-like domain B6V88_03625 PF00657 GDSL-like Lipase/Acylhydrolase B6V88_03635 PF00226 DnaJ domain B6V88_03635 PF05099 Tellurite resistance protein TerB B6V88_03645 PF01258 Prokaryotic dksA/traR C4-type zinc finger B6V88_03650 PF05175 Methyltransferase small domain B6V88_03655 PF00472 RF-1 domain B6V88_03655 PF03462 PCRF domain B6V88_03660 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain B6V88_03660 PF01488 Shikimate / quinate 5-dehydrogenase B6V88_03660 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain B6V88_03670 PF02163 Peptidase family M50 B6V88_03680 PF08241 Methyltransferase domain B6V88_03685 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family B6V88_03690 PF00351 Biopterin-dependent aromatic amino acid hydroxylase B6V88_03695 PF00072 Response regulator receiver domain B6V88_03695 PF00196 Bacterial regulatory proteins, luxR family B6V88_03700 PF01541 GIY-YIG catalytic domain B6V88_03700 PF02151 UvrB/uvrC motif B6V88_03700 PF08459 UvrC Helix-hairpin-helix N-terminal B6V88_03700 PF14520 Helix-hairpin-helix domain B6V88_03705 PF03734 L,D-transpeptidase catalytic domain B6V88_03715 PF08238 Sel1 repeat B6V88_03725 PF06821 Serine hydrolase B6V88_03750 PF13540 Regulator of chromosome condensation (RCC1) repeat B6V88_03755 PF10972 B6V88_03755 B6V88_03760 PF00005 ABC transporter B6V88_03760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region B6V88_03775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) B6V88_03775 PF03129 Anticodon binding domain B6V88_03775 PF04073 Aminoacyl-tRNA editing domain B6V88_03780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B6V88_03780 PF03466 LysR substrate binding domain B6V88_03790 PF01925 B6V88_03790 B6V88_03800 PF01978 Sugar-specific transcriptional regulator TrmB B6V88_03810 PF00484 Carbonic anhydrase B6V88_03810 PF00916 B6V88_03810 B6V88_03815 PF01171 PP-loop family B6V88_03820 PF02321 Outer membrane efflux protein B6V88_03825 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) B6V88_03830 PF00155 Aminotransferase class I and II B6V88_03835 PF00107 Zinc-binding dehydrogenase B6V88_03835 PF08240 Alcohol dehydrogenase GroES-like domain B6V88_03840 PF00005 ABC transporter B6V88_03840 PF12848 ABC transporter B6V88_03845 PF03734 L,D-transpeptidase catalytic domain B6V88_03850 PF13557 B6V88_03850 B6V88_03855 PF11393 B6V88_03855 B6V88_03860 PF00106 short chain dehydrogenase B6V88_03865 PF01979 Amidohydrolase family B6V88_03870 PF11738 Protein of unknown function (DUF3298) B6V88_03880 PF02353 Mycolic acid cyclopropane synthetase B6V88_03885 PF00133 tRNA synthetases class I (I, L, M and V) B6V88_03885 PF08264 Anticodon-binding domain of tRNA B6V88_03885 PF10458 Valyl tRNA synthetase tRNA binding arm B6V88_03890 PF00873 AcrB/AcrD/AcrF family B6V88_03895 PF16576 B6V88_03895 B6V88_03905 PF00464 Serine hydroxymethyltransferase B6V88_03910 PF03477 ATP cone domain B6V88_03915 PF01029 NusB family B6V88_03920 PF00586 AIR synthase related protein, N-terminal domain B6V88_03920 PF02769 AIR synthase related protein, C-terminal domain B6V88_03925 PF04608 Phosphatidylglycerophosphatase A B6V88_03930 PF01594 B6V88_03930 B6V88_03940 PF07043 B6V88_03940 B6V88_03945 PF00497 Bacterial extracellular solute-binding proteins, family 3 B6V88_03955 PF00561 alpha/beta hydrolase fold B6V88_03960 PF03710 Glutamate-ammonia ligase adenylyltransferase B6V88_03960 PF08335 GlnD PII-uridylyltransferase B6V88_03965 PF05721 Phytanoyl-CoA dioxygenase (PhyH) B6V88_03975 PF01627 Hpt domain B6V88_03990 PF07690 Major Facilitator Superfamily B6V88_03995 PF04199 Putative cyclase B6V88_04000 PF12919 TcdA/TcdB catalytic glycosyltransferase domain B6V88_04005 PF00190 Cupin B6V88_04015 PF00365 Phosphofructokinase B6V88_04020 PF00072 Response regulator receiver domain B6V88_04020 PF00512 His Kinase A (phospho-acceptor) domain B6V88_04020 PF01627 Hpt domain B6V88_04020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B6V88_04020 PF09984 B6V88_04020 B6V88_04025 PF00749 tRNA synthetases class I (E and Q), catalytic domain B6V88_04030 PF00072 Response regulator receiver domain B6V88_04035 PF00512 His Kinase A (phospho-acceptor) domain B6V88_04035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B6V88_04035 PF08448 PAS fold B6V88_04045 PF04193 PQ loop repeat B6V88_04060 PF13306 Leucine rich repeats (6 copies) B6V88_04065 PF00027 Cyclic nucleotide-binding domain B6V88_04065 PF01734 Patatin-like phospholipase B6V88_04070 PF11004 B6V88_04070 B6V88_04075 PF00210 Ferritin-like domain B6V88_04080 PF00497 Bacterial extracellular solute-binding proteins, family 3 B6V88_04090 PF12796 Ankyrin repeats (3 copies) B6V88_04090 PF13606 Ankyrin repeat B6V88_04105 PF00884 Sulfatase B6V88_04105 PF11893 B6V88_04105 B6V88_04120 PF03819 MazG nucleotide pyrophosphohydrolase domain B6V88_04120 PF13508 Acetyltransferase (GNAT) domain B6V88_04130 PF00248 Aldo/keto reductase family B6V88_04135 PF00204 DNA gyrase B B6V88_04135 PF00986 DNA gyrase B subunit, carboxyl terminus B6V88_04135 PF01751 Toprim domain B6V88_04135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B6V88_04140 PF10609 ParA/MinD ATPase like B6V88_04145 PF00580 UvrD/REP helicase N-terminal domain B6V88_04145 PF12705 PD-(D/E)XK nuclease superfamily B6V88_04145 PF13361 UvrD-like helicase C-terminal domain B6V88_04155 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) B6V88_04165 PF00490 Delta-aminolevulinic acid dehydratase B6V88_04170 PF04357 B6V88_04170 B6V88_04175 PF01103 Surface antigen B6V88_04175 PF17243 B6V88_04175 B6V88_04180 PF00488 MutS domain V B6V88_04180 PF01624 MutS domain I B6V88_04180 PF05188 MutS domain II B6V88_04180 PF05190 MutS family domain IV B6V88_04180 PF05192 MutS domain III B6V88_04185 PF02464 Competence-damaged protein B6V88_04190 PF00154 recA bacterial DNA recombination protein B6V88_04195 PF02631 RecX family B6V88_04200 PF01411 tRNA synthetases class II (A) B6V88_04200 PF02272 DHHA1 domain B6V88_04200 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain B6V88_04205 PF00696 Amino acid kinase family B6V88_04205 PF01842 ACT domain B6V88_04205 PF13840 ACT domain B6V88_04210 PF01741 Large-conductance mechanosensitive channel, MscL B6V88_04220 PF08238 Sel1 repeat B6V88_04225 PF00270 DEAD/DEAH box helicase B6V88_04225 PF00271 Helicase conserved C-terminal domain B6V88_04225 PF08494 B6V88_04225 B6V88_04230 PF16933 B6V88_04230 B6V88_04235 PF16933 B6V88_04235 B6V88_04240 PF00534 Glycosyl transferases group 1 B6V88_04240 PF11997 B6V88_04240 B6V88_04255 PF16963 B6V88_04255 B6V88_04260 PF13036 Protein of unknown function (DUF3897) B6V88_04265 PF05036 Sporulation related domain B6V88_04270 PF13429 Tetratricopeptide repeat B6V88_04275 PF00355 Rieske [2Fe-2S] domain B6V88_04275 PF13483 Beta-lactamase superfamily domain B6V88_04280 PF01370 NAD dependent epimerase/dehydratase family B6V88_04285 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain B6V88_04285 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain B6V88_04285 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain B6V88_04290 PF01370 NAD dependent epimerase/dehydratase family B6V88_04295 PF03537 Glycoside-hydrolase family GH114 B6V88_04315 PF00394 Multicopper oxidase B6V88_04315 PF07731 Multicopper oxidase B6V88_04315 PF07732 Multicopper oxidase B6V88_04325 PF00005 ABC transporter B6V88_04325 PF00664 ABC transporter transmembrane region B6V88_04335 PF16576 B6V88_04335 B6V88_04340 PF00027 Cyclic nucleotide-binding domain B6V88_04370 PF01565 FAD binding domain B6V88_04375 PF01052 Surface presentation of antigens (SPOA) B6V88_04375 PF02154 Flagellar motor switch protein FliM B6V88_04380 PF01052 Surface presentation of antigens (SPOA) B6V88_04385 PF04347 B6V88_04385 B6V88_04390 PF00813 B6V88_04390 B6V88_04395 PF01313 B6V88_04395 B6V88_04400 PF01311 B6V88_04400 B6V88_04405 PF01312 FlhB HrpN YscU SpaS Family B6V88_04410 PF00771 FHIPEP family B6V88_04415 PF00448 SRP54-type protein, GTPase domain B6V88_04420 PF10609 ParA/MinD ATPase like B6V88_04425 PF04539 Sigma-70 region 3 B6V88_04425 PF04542 Sigma-70 region 2 B6V88_04425 PF04545 Sigma-70, region 4 B6V88_04430 PF01618 B6V88_04430 B6V88_04435 PF00691 OmpA family B6V88_04435 PF13677 B6V88_04435 B6V88_04440 PF10975 B6V88_04440 B6V88_04450 PF00472 RF-1 domain B6V88_04450 PF03462 PCRF domain B6V88_04455 PF00152 tRNA synthetases class II (D, K and N) B6V88_04455 PF01336 OB-fold nucleic acid binding domain B6V88_04470 PF13516 Leucine Rich repeat B6V88_04475 PF00268 Ribonucleotide reductase, small chain B6V88_04480 PF00317 Ribonucleotide reductase, all-alpha domain B6V88_04480 PF02867 Ribonucleotide reductase, barrel domain B6V88_04480 PF03477 ATP cone domain B6V88_04485 PF09992 Predicted periplasmic protein (DUF2233) B6V88_04490 PF01523 Putative modulator of DNA gyrase B6V88_04495 PF01176 Translation initiation factor 1A / IF-1 B6V88_04500 PF03588 Leucyl/phenylalanyl-tRNA protein transferase B6V88_04505 PF07992 Pyridine nucleotide-disulphide oxidoreductase B6V88_04515 PF03548 Outer membrane lipoprotein carrier protein LolA B6V88_04525 PF00195 Chalcone and stilbene synthases, N-terminal domain B6V88_04525 PF02797 Chalcone and stilbene synthases, C-terminal domain B6V88_04530 PF09335 B6V88_04530 B6V88_04555 PF00512 His Kinase A (phospho-acceptor) domain B6V88_04555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B6V88_04560 PF00072 Response regulator receiver domain B6V88_04560 PF00158 Sigma-54 interaction domain B6V88_04560 PF02954 Bacterial regulatory protein, Fis family B6V88_04565 PF02049 B6V88_04565 B6V88_04570 PF01514 Secretory protein of YscJ/FliF family B6V88_04570 PF08345 B6V88_04570 B6V88_04575 PF01706 FliG C-terminal domain B6V88_04575 PF14841 FliG middle domain B6V88_04575 PF14842 FliG N-terminal domain B6V88_04580 PF02108 B6V88_04580 B6V88_04585 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain B6V88_04585 PF02874 ATP synthase alpha/beta family, beta-barrel domain B6V88_04590 PF02050 Flagellar FliJ protein B6V88_04595 PF13116 B6V88_04595 B6V88_04595 PF13502 B6V88_04595 B6V88_04605 PF01225 Mur ligase family, catalytic domain B6V88_04605 PF02875 Mur ligase family, glutamate ligase domain B6V88_04605 PF08245 Mur ligase middle domain B6V88_04625 PF00004 ATPase family associated with various cellular activities (AAA) B6V88_04625 PF02861 Clp amino terminal domain B6V88_04625 PF07724 AAA domain (Cdc48 subfamily) B6V88_04625 PF10431 C-terminal, D2-small domain, of ClpB protein B6V88_04630 PF01343 Peptidase family S49 B6V88_04640 PF00892 EamA-like transporter family B6V88_04645 PF00459 Inositol monophosphatase family B6V88_04650 PF00588 SpoU rRNA Methylase family B6V88_04660 PF01592 NifU-like N terminal domain B6V88_04665 PF01521 Iron-sulphur cluster biosynthesis B6V88_04670 PF02954 Bacterial regulatory protein, Fis family B6V88_04680 PF03309 Type III pantothenate kinase B6V88_04685 PF02381 MraZ protein B6V88_04690 PF01795 MraW methylase family B6V88_04695 PF04999 B6V88_04695 B6V88_04700 PF00905 Penicillin binding protein transpeptidase domain B6V88_04700 PF03717 Penicillin-binding Protein dimerisation domain B6V88_04705 PF01225 Mur ligase family, catalytic domain B6V88_04705 PF02875 Mur ligase family, glutamate ligase domain B6V88_04705 PF08245 Mur ligase middle domain B6V88_04710 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain B6V88_04710 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain B6V88_04715 PF02163 Peptidase family M50 B6V88_04720 PF13231 B6V88_04720 B6V88_04725 PF01569 PAP2 superfamily B6V88_04730 PF00535 Glycosyl transferase family 2 B6V88_04735 PF07578 Lipid A Biosynthesis N-terminal domain B6V88_04740 PF13231 B6V88_04740 B6V88_04745 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain B6V88_04750 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain B6V88_04750 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain B6V88_04755 PF00483 Nucleotidyl transferase B6V88_04760 PF01012 Electron transfer flavoprotein domain B6V88_04765 PF00766 Electron transfer flavoprotein FAD-binding domain B6V88_04765 PF01012 Electron transfer flavoprotein domain B6V88_04770 PF01262 Alanine dehydrogenase/PNT, C-terminal domain B6V88_04770 PF05222 Alanine dehydrogenase/PNT, N-terminal domain B6V88_04775 PF02985 HEAT repeat B6V88_04775 PF12717 non-SMC mitotic condensation complex subunit 1 B6V88_04780 PF02985 HEAT repeat B6V88_04780 PF12717 non-SMC mitotic condensation complex subunit 1 B6V88_04780 PF13646 HEAT repeats B6V88_04795 PF11104 Type IV pilus assembly protein PilM; B6V88_04800 PF05137 B6V88_04800 B6V88_04805 PF04350 Pilus assembly protein, PilO B6V88_04810 PF04351 Pilus assembly protein, PilP B6V88_04815 PF00263 B6V88_04815 B6V88_04815 PF03958 Bacterial type II/III secretion system short domain B6V88_04820 PF01202 Shikimate kinase B6V88_04825 PF01761 3-dehydroquinate synthase B6V88_04830 PF05036 Sporulation related domain B6V88_04830 PF13401 AAA domain B6V88_04835 PF04973 B6V88_04835 B6V88_04840 PF00582 Universal stress protein family B6V88_04845 PF00582 Universal stress protein family B6V88_04850 PF01738 Dienelactone hydrolase family B6V88_04855 PF00156 Phosphoribosyl transferase domain B6V88_04860 PF08240 Alcohol dehydrogenase GroES-like domain B6V88_04870 PF00188 Cysteine-rich secretory protein family B6V88_04875 PF00892 EamA-like transporter family B6V88_04880 PF00043 Glutathione S-transferase, C-terminal domain B6V88_04880 PF13417 Glutathione S-transferase, N-terminal domain B6V88_04885 PF07690 Major Facilitator Superfamily B6V88_04895 PF00999 Sodium/hydrogen exchanger family B6V88_04900 PF02594 Uncharacterised ACR, YggU family COG1872 B6V88_04905 PF01687 Riboflavin kinase B6V88_04905 PF06574 FAD synthetase B6V88_04910 PF00133 tRNA synthetases class I (I, L, M and V) B6V88_04910 PF06827 Zinc finger found in FPG and IleRS B6V88_04910 PF08264 Anticodon-binding domain of tRNA B6V88_04915 PF01252 B6V88_04915 B6V88_04920 PF01081 KDPG and KHG aldolase B6V88_04930 PF07963 Prokaryotic N-terminal methylation motif B6V88_04930 PF16732 B6V88_04930 B6V88_04940 PF01926 50S ribosome-binding GTPase B6V88_04940 PF07650 KH domain B6V88_04945 PF02565 Recombination protein O C terminal B6V88_04945 PF11967 Recombination protein O N terminal B6V88_04950 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ B6V88_04955 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase B6V88_04955 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg B6V88_04955 PF17147 B6V88_04955 B6V88_04960 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain B6V88_04965 PF00196 Bacterial regulatory proteins, luxR family B6V88_04975 PF05761 5' nucleotidase family B6V88_04985 PF01027 Inhibitor of apoptosis-promoting Bax1 B6V88_04990 PF00795 Carbon-nitrogen hydrolase B6V88_04995 PF01523 Putative modulator of DNA gyrase B6V88_05000 PF00270 DEAD/DEAH box helicase B6V88_05000 PF00271 Helicase conserved C-terminal domain B6V88_05000 PF02559 CarD-like/TRCF domain B6V88_05000 PF03461 TRCF domain B6V88_05005 PF01694 Rhomboid family B6V88_05010 PF02601 B6V88_05010 B6V88_05010 PF13742 B6V88_05010 B6V88_05025 PF04960 Glutaminase B6V88_05030 PF00218 Indole-3-glycerol phosphate synthase B6V88_05035 PF00591 Glycosyl transferase family, a/b domain B6V88_05035 PF02885 Glycosyl transferase family, helical bundle domain B6V88_05040 PF00117 Glutamine amidotransferase class-I B6V88_05045 PF00005 ABC transporter B6V88_05045 PF12399 Branched-chain amino acid ATP-binding cassette transporter B6V88_05050 PF03968 OstA-like protein B6V88_05055 PF06835 Lipopolysaccharide-assembly, LptC-related B6V88_05060 PF08282 haloacid dehalogenase-like hydrolase B6V88_05065 PF00571 CBS domain B6V88_05065 PF01380 SIS domain B6V88_05075 PF02405 B6V88_05075 B6V88_05080 PF02470 B6V88_05080 B6V88_05085 PF05494 Toluene tolerance, Ttg2 B6V88_05090 PF13466 STAS domain B6V88_05095 PF01722 BolA-like protein B6V88_05100 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) B6V88_05105 PF01784 NIF3 (NGG1p interacting factor 3) B6V88_05125 PF02719 Polysaccharide biosynthesis protein B6V88_05125 PF13727 CoA-binding domain B6V88_05130 PF01588 Putative tRNA binding domain B6V88_05135 PF00060 Ligand-gated ion channel B6V88_05135 PF00497 Bacterial extracellular solute-binding proteins, family 3 B6V88_05140 PF13561 Enoyl-(Acyl carrier protein) reductase B6V88_05150 PF00324 Amino acid permease B6V88_05155 PF13302 Acetyltransferase (GNAT) domain B6V88_05165 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase B6V88_05185 PF00248 Aldo/keto reductase family B6V88_05190 PF00106 short chain dehydrogenase B6V88_05205 PF00933 Glycosyl hydrolase family 3 N terminal domain B6V88_05210 PF00375 Sodium:dicarboxylate symporter family B6V88_05220 PF04134 B6V88_05220 B6V88_05225 PF01546 Peptidase family M20/M25/M40 B6V88_05225 PF07687 Peptidase dimerisation domain B6V88_05230 PF00132 Bacterial transferase hexapeptide (six repeats) B6V88_05230 PF14602 Hexapeptide repeat of succinyl-transferase B6V88_05230 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal B6V88_05235 PF01370 NAD dependent epimerase/dehydratase family B6V88_05250 PF01553 Acyltransferase B6V88_05255 PF01053 Cys/Met metabolism PLP-dependent enzyme B6V88_05260 PF00563 EAL domain B6V88_05260 PF00990 GGDEF domain B6V88_05260 PF13188 PAS domain B6V88_05260 PF13426 PAS domain B6V88_05265 PF01494 FAD binding domain B6V88_05275 PF01565 FAD binding domain B6V88_05275 PF09265 Cytokinin dehydrogenase 1, FAD and cytokinin binding B6V88_05280 PF01541 GIY-YIG catalytic domain B6V88_05285 PF00891 O-methyltransferase B6V88_05290 PF11356 Type IV pilus biogenesis B6V88_05295 PF08238 Sel1 repeat B6V88_05305 PF01699 Sodium/calcium exchanger protein B6V88_05310 PF00648 Calpain family cysteine protease B6V88_05315 PF07690 Major Facilitator Superfamily B6V88_05320 PF00633 Helix-hairpin-helix motif B6V88_05320 PF00730 HhH-GPD superfamily base excision DNA repair protein B6V88_05320 PF14815 NUDIX domain B6V88_05325 PF05170 B6V88_05325 B6V88_05335 PF13180 PDZ domain B6V88_05335 PF13365 Trypsin-like peptidase domain B6V88_05340 PF00156 Phosphoribosyl transferase domain B6V88_05345 PF00313 'Cold-shock' DNA-binding domain B6V88_05350 PF00106 short chain dehydrogenase B6V88_05360 PF07690 Major Facilitator Superfamily B6V88_05365 PF01218 Coproporphyrinogen III oxidase B6V88_05370 PF00460 Flagella basal body rod protein B6V88_05375 PF06429 Flagellar basal body rod FlgEFG protein C-terminal B6V88_05380 PF03963 B6V88_05380 B6V88_05380 PF13860 FlgD Ig-like domain B6V88_05380 PF13861 FlgD Tudor-like domain B6V88_05385 PF00460 Flagella basal body rod protein B6V88_05385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal B6V88_05385 PF07559 Flagellar basal body protein FlaE B6V88_05390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal B6V88_05395 PF00460 Flagella basal body rod protein B6V88_05395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal B6V88_05400 PF02107 B6V88_05400 B6V88_05405 PF02119 B6V88_05405 B6V88_05410 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase B6V88_05410 PF10135 B6V88_05410 B6V88_05415 PF00460 Flagella basal body rod protein B6V88_05415 PF06429 Flagellar basal body rod FlgEFG protein C-terminal B6V88_05420 PF00669 Bacterial flagellin N-terminal helical region B6V88_05420 PF00700 Bacterial flagellin C-terminal helical region B6V88_05425 PF01047 MarR family B6V88_05430 PF04107 Glutamate-cysteine ligase family 2(GCS2) B6V88_05440 PF00484 Carbonic anhydrase B6V88_05450 PF01833 IPT/TIG domain B6V88_05450 PF07603 B6V88_05450 B6V88_05470 PF00072 Response regulator receiver domain B6V88_05470 PF00512 His Kinase A (phospho-acceptor) domain B6V88_05470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B6V88_05470 PF08448 PAS fold B6V88_05470 PF13426 PAS domain B6V88_05475 PF00501 AMP-binding enzyme B6V88_05475 PF00550 Phosphopantetheine attachment site B6V88_05475 PF00668 Condensation domain B6V88_05475 PF13193 AMP-binding enzyme C-terminal domain B6V88_05480 PF00109 Beta-ketoacyl synthase, N-terminal domain B6V88_05480 PF02801 Beta-ketoacyl synthase, C-terminal domain B6V88_05480 PF08659 KR domain B6V88_05480 PF16197 B6V88_05480 B6V88_05485 PF00550 Phosphopantetheine attachment site B6V88_05485 PF00975 Thioesterase domain B6V88_05490 PF00561 alpha/beta hydrolase fold B6V88_05495 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) B6V88_05505 PF00563 EAL domain B6V88_05505 PF00990 GGDEF domain B6V88_05505 PF08447 PAS fold B6V88_05505 PF13185 GAF domain B6V88_05515 PF01946 Thi4 family B6V88_05515 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase B6V88_05520 PF16957 B6V88_05520 B6V88_05525 PF01039 Carboxyl transferase domain B6V88_05525 PF06857 B6V88_05525 B6V88_05530 PF06833 Malonate decarboxylase gamma subunit (MdcE) B6V88_05535 PF10620 B6V88_05535 B6V88_05540 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase B6V88_05545 PF00698 Acyl transferase domain B6V88_05550 PF13561 Enoyl-(Acyl carrier protein) reductase B6V88_05565 PF08241 Methyltransferase domain B6V88_05585 PF08240 Alcohol dehydrogenase GroES-like domain B6V88_05585 PF13602 Zinc-binding dehydrogenase B6V88_05590 PF02567 Phenazine biosynthesis-like protein B6V88_05595 PF09394 Chagasin family peptidase inhibitor I42 B6V88_05600 PF13505 Outer membrane protein beta-barrel domain B6V88_05605 PF00314 Thaumatin family B6V88_05615 PF03734 L,D-transpeptidase catalytic domain B6V88_05620 PF01734 Patatin-like phospholipase B6V88_05625 PF01734 Patatin-like phospholipase B6V88_05625 PF12536 B6V88_05625 B6V88_05630 PF00266 Aminotransferase class-V B6V88_05635 PF04280 Tim44-like domain B6V88_05635 PF07466 B6V88_05635 B6V88_05640 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily B6V88_05645 PF08279 HTH domain B6V88_05645 PF13280 B6V88_05645 B6V88_05650 PF06094 AIG2-like family B6V88_05655 PF00390 Malic enzyme, N-terminal domain B6V88_05655 PF03949 Malic enzyme, NAD binding domain B6V88_05665 PF01975 Survival protein SurE B6V88_05670 PF01476 LysM domain B6V88_05670 PF01551 Peptidase family M23 B6V88_05675 PF00140 Sigma-70 factor, region 1 B6V88_05675 PF04539 Sigma-70 region 3 B6V88_05675 PF04542 Sigma-70 region 2 B6V88_05675 PF04545 Sigma-70, region 4 B6V88_05680 PF00291 Pyridoxal-phosphate dependent enzyme B6V88_05685 PF04209 homogentisate 1,2-dioxygenase B6V88_05690 PF01709 Transcriptional regulator B6V88_05695 PF02075 Crossover junction endodeoxyribonuclease RuvC B6V88_05700 PF01330 RuvA N terminal domain B6V88_05700 PF07499 RuvA, C-terminal domain B6V88_05700 PF14520 Helix-hairpin-helix domain B6V88_05710 PF00512 His Kinase A (phospho-acceptor) domain B6V88_05710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B6V88_05710 PF08521 B6V88_05710 B6V88_05715 PF00072 Response regulator receiver domain B6V88_05715 PF00486 Transcriptional regulatory protein, C terminal B6V88_05720 PF04279 B6V88_05720 B6V88_05730 PF00512 His Kinase A (phospho-acceptor) domain B6V88_05730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B6V88_05730 PF08448 PAS fold B6V88_05735 PF01464 Transglycosylase SLT domain B6V88_05735 PF01476 LysM domain B6V88_05740 PF00753 Metallo-beta-lactamase superfamily B6V88_05740 PF16123 B6V88_05740 B6V88_05745 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ B6V88_05750 PF01427 D-ala-D-ala dipeptidase B6V88_05760 PF05118 Aspartyl/Asparaginyl beta-hydroxylase B6V88_05770 PF07690 Major Facilitator Superfamily B6V88_05775 PF14485 B6V88_05775 B6V88_05785 PF00149 Calcineurin-like phosphoesterase B6V88_05790 PF03176 MMPL family B6V88_05795 PF00027 Cyclic nucleotide-binding domain B6V88_05795 PF01734 Patatin-like phospholipase B6V88_05800 PF05118 Aspartyl/Asparaginyl beta-hydroxylase B6V88_05805 PF11700 B6V88_05805 B6V88_05810 PF03435 Saccharopine dehydrogenase B6V88_05810 PF16653 B6V88_05810 B6V88_05825 PF13230 Glutamine amidotransferases class-II B6V88_05830 PF00027 Cyclic nucleotide-binding domain B6V88_05835 PF00210 Ferritin-like domain B6V88_05845 PF14539 Domain of unknown function (DUF4442) B6V88_05850 PF09594 B6V88_05850 B6V88_05855 PF01565 FAD binding domain B6V88_05870 PF01757 B6V88_05870 B6V88_05875 PF12340 B6V88_05875 B6V88_05885 PF13424 Tetratricopeptide repeat B6V88_05890 PF01810 B6V88_05890 B6V88_05895 PF00583 Acetyltransferase (GNAT) family B6V88_05895 PF01047 MarR family B6V88_05900 PF00144 Beta-lactamase B6V88_05900 PF00756 Putative esterase B6V88_05905 PF00005 ABC transporter B6V88_05905 PF13304 AAA domain B6V88_05910 PF00005 ABC transporter B6V88_05910 PF00664 ABC transporter transmembrane region B6V88_05920 PF03734 L,D-transpeptidase catalytic domain B6V88_05930 PF00072 Response regulator receiver domain B6V88_05945 PF13302 Acetyltransferase (GNAT) domain B6V88_05945 PF13380 CoA binding domain B6V88_05945 PF13549 ATP-grasp domain B6V88_05945 PF13607 Succinyl-CoA ligase like flavodoxin domain B6V88_05950 PF00591 Glycosyl transferase family, a/b domain B6V88_05950 PF02885 Glycosyl transferase family, helical bundle domain B6V88_05950 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain B6V88_05955 PF00122 E1-E2 ATPase B6V88_05955 PF00689 Cation transporting ATPase, C-terminus B6V88_05955 PF00690 Cation transporter/ATPase, N-terminus B6V88_05955 PF00702 haloacid dehalogenase-like hydrolase B6V88_05960 PF02566 OsmC-like protein B6V88_05965 PF00582 Universal stress protein family B6V88_05970 PF00582 Universal stress protein family B6V88_05975 PF00122 E1-E2 ATPase B6V88_05975 PF00702 haloacid dehalogenase-like hydrolase B6V88_05980 PF03824 B6V88_05980 B6V88_05990 PF01155 Hydrogenase expression/synthesis hypA family B6V88_05995 PF02492 CobW/HypB/UreG, nucleotide-binding domain B6V88_06000 PF00708 Acylphosphatase B6V88_06000 PF01300 Telomere recombination B6V88_06000 PF07503 HypF finger B6V88_06005 PF01455 HupF/HypC family B6V88_06010 PF01924 Hydrogenase formation hypA family B6V88_06015 PF00586 AIR synthase related protein, N-terminal domain B6V88_06015 PF02769 AIR synthase related protein, C-terminal domain B6V88_06020 PF17179 B6V88_06020 B6V88_06025 PF00175 Oxidoreductase NAD-binding domain B6V88_06025 PF00970 Oxidoreductase FAD-binding domain B6V88_06025 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B B6V88_06030 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit B6V88_06035 PF00374 Nickel-dependent hydrogenase B6V88_06040 PF01750 Hydrogenase maturation protease B6V88_06045 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family B6V88_06050 PF00617 RasGEF domain B6V88_06060 PF04480 Protein of unknown function (DUF559) B6V88_06065 PF13649 Methyltransferase domain B6V88_06080 PF00484 Carbonic anhydrase B6V88_06085 PF00108 Thiolase, N-terminal domain B6V88_06085 PF02803 Thiolase, C-terminal domain B6V88_06095 PF03734 L,D-transpeptidase catalytic domain B6V88_06100 PF14378 B6V88_06100 B6V88_06105 PF02599 Global regulator protein family B6V88_06110 PF01250 Ribosomal protein S6 B6V88_06115 PF01084 Ribosomal protein S18 B6V88_06120 PF09991 B6V88_06120 B6V88_06125 PF01281 Ribosomal protein L9, N-terminal domain B6V88_06125 PF03948 Ribosomal protein L9, C-terminal domain B6V88_06130 PF00578 AhpC/TSA family B6V88_06145 PF01066 CDP-alcohol phosphatidyltransferase B6V88_06150 PF00171 Aldehyde dehydrogenase family B6V88_06160 PF05088 B6V88_06160 B6V88_06165 PF01292 Prokaryotic cytochrome b561 B6V88_06170 PF01571 Aminomethyltransferase folate-binding domain B6V88_06175 PF03937 Flavinator of succinate dehydrogenase B6V88_06185 PF05491 Holliday junction DNA helicase ruvB C-terminus B6V88_06185 PF05496 Holliday junction DNA helicase ruvB N-terminus B6V88_06190 PF03061 Thioesterase superfamily B6V88_06195 PF01618 B6V88_06195 B6V88_06200 PF02472 Biopolymer transport protein ExbD/TolR B6V88_06205 PF13103 TonB C terminal B6V88_06210 PF04052 TolB amino-terminal domain B6V88_06210 PF07676 WD40-like Beta Propeller Repeat B6V88_06215 PF02265 S1/P1 Nuclease B6V88_06230 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) B6V88_06230 PF00364 Biotin-requiring enzyme B6V88_06230 PF02817 e3 binding domain B6V88_06235 PF02779 Transketolase, pyrimidine binding domain B6V88_06235 PF02780 Transketolase, C-terminal domain B6V88_06240 PF00676 Dehydrogenase E1 component B6V88_06250 PF00425 chorismate binding enzyme B6V88_06250 PF04715 Anthranilate synthase component I, N terminal region B6V88_06255 PF00293 NUDIX domain B6V88_06260 PF00501 AMP-binding enzyme B6V88_06260 PF13193 AMP-binding enzyme C-terminal domain B6V88_06265 PF03775 Septum formation inhibitor MinC, C-terminal domain B6V88_06265 PF05209 Septum formation inhibitor MinC, N-terminal domain B6V88_06270 PF00149 Calcineurin-like phosphoesterase B6V88_06280 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) B6V88_06290 PF00334 Nucleoside diphosphate kinase B6V88_06295 PF04055 Radical SAM superfamily B6V88_06300 PF13432 Tetratricopeptide repeat B6V88_06305 PF13413 Helix-turn-helix domain B6V88_06310 PF03129 Anticodon binding domain B6V88_06310 PF13393 Histidyl-tRNA synthetase B6V88_06315 PF09976 Tetratricopeptide repeat B6V88_06320 PF13360 PQQ-like domain B6V88_06325 PF01926 50S ribosome-binding GTPase B6V88_06325 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal B6V88_06330 PF00582 Universal stress protein family B6V88_06335 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) B6V88_06340 PF01743 Poly A polymerase head domain B6V88_06340 PF12626 Polymerase A arginine-rich C-terminus B6V88_06340 PF12627 Probable RNA and SrmB- binding site of polymerase A B6V88_06345 PF00294 pfkB family carbohydrate kinase B6V88_06350 PF00202 Aminotransferase class-III B6V88_06355 PF00301 Rubredoxin B6V88_06360 PF03653 B6V88_06360 B6V88_06365 PF03741 B6V88_06365 B6V88_06370 PF00871 Acetokinase family B6V88_06375 PF01515 Phosphate acetyl/butaryl transferase B6V88_06375 PF07085 DRTGG domain B6V88_06375 PF13500 AAA domain B6V88_06380 PF01266 FAD dependent oxidoreductase B6V88_06380 PF05430 S-adenosyl-L-methionine-dependent methyltransferase B6V88_06390 PF02567 Phenazine biosynthesis-like protein B6V88_06395 PF13714 Phosphoenolpyruvate phosphomutase B6V88_06400 PF00285 Citrate synthase B6V88_06405 PF03972 MmgE/PrpD family B6V88_06410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B6V88_06410 PF02770 Acyl-CoA dehydrogenase, middle domain B6V88_06415 PF03618 B6V88_06415 B6V88_06435 PF01478 Type IV leader peptidase family B6V88_06435 PF06750 B6V88_06435 B6V88_06440 PF00482 Type II secretion system (T2SS), protein F B6V88_06445 PF00437 Type II/IV secretion system protein B6V88_06445 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain B6V88_06450 PF08241 Methyltransferase domain B6V88_06460 PF08850 B6V88_06460 B6V88_06465 PF00156 Phosphoribosyl transferase domain B6V88_06475 PF03734 L,D-transpeptidase catalytic domain B6V88_06485 PF09335 B6V88_06485 B6V88_06485 PF14067 B6V88_06485 B6V88_06490 PF03099 Biotin/lipoate A/B protein ligase family B6V88_06495 PF04359 Protein of unknown function (DUF493) B6V88_06500 PF01063 Aminotransferase class IV B6V88_06510 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel B6V88_06510 PF05036 Sporulation related domain B6V88_06515 PF03734 L,D-transpeptidase catalytic domain B6V88_06520 PF05532 CsbD-like B6V88_06525 PF02561 Flagellar protein FliS B6V88_06530 PF02465 B6V88_06530 B6V88_06530 PF07195 B6V88_06530 B6V88_06540 PF00669 Bacterial flagellin N-terminal helical region B6V88_06540 PF00700 Bacterial flagellin C-terminal helical region B6V88_06545 PF01039 Carboxyl transferase domain B6V88_06550 PF02875 Mur ligase family, glutamate ligase domain B6V88_06550 PF08245 Mur ligase middle domain B6V88_06555 PF05036 Sporulation related domain B6V88_06560 PF02674 B6V88_06560 B6V88_06565 PF00069 Protein kinase domain B6V88_06570 PF01467 Cytidylyltransferase B6V88_06575 PF06144 DNA polymerase III, delta subunit B6V88_06580 PF04390 Lipopolysaccharide-assembly B6V88_06585 PF00133 tRNA synthetases class I (I, L, M and V) B6V88_06585 PF08264 Anticodon-binding domain of tRNA B6V88_06585 PF13603 Leucyl-tRNA synthetase, Domain 2 B6V88_06590 PF00795 Carbon-nitrogen hydrolase B6V88_06595 PF03435 Saccharopine dehydrogenase B6V88_06595 PF16653 B6V88_06595 B6V88_06600 PF00171 Aldehyde dehydrogenase family B6V88_06610 PF00108 Thiolase, N-terminal domain B6V88_06610 PF02803 Thiolase, C-terminal domain B6V88_06620 PF05958 tRNA (Uracil-5-)-methyltransferase B6V88_06625 PF02824 TGS domain B6V88_06625 PF04607 Region found in RelA / SpoT proteins B6V88_06625 PF13291 ACT domain B6V88_06625 PF13328 HD domain B6V88_06640 PF00330 Aconitase family (aconitate hydratase) B6V88_06640 PF00694 Aconitase C-terminal domain B6V88_06645 PF09587 Bacterial capsule synthesis protein PGA_cap B6V88_06650 PF01968 Hydantoinase/oxoprolinase B6V88_06650 PF02538 B6V88_06650 B6V88_06650 PF05378 B6V88_06650 B6V88_06660 PF02417 B6V88_06660 B6V88_06670 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain B6V88_06670 PF07992 Pyridine nucleotide-disulphide oxidoreductase B6V88_06675 PF07264 Etoposide-induced protein 2 B6V88_06680 PF04024 B6V88_06680 B6V88_06685 PF00207 Alpha-2-macroglobulin family B6V88_06685 PF01835 MG2 domain B6V88_06685 PF07703 Alpha-2-macroglobulin family N-terminal region B6V88_06685 PF11974 Alpha-2-macroglobulin MG1 domain B6V88_06690 PF00905 Penicillin binding protein transpeptidase domain B6V88_06690 PF00912 Transglycosylase B6V88_06690 PF06832 B6V88_06690 B6V88_06695 PF04828 Glutathione-dependent formaldehyde-activating enzyme B6V88_06710 PF04430 Protein of unknown function (DUF498/DUF598) B6V88_06715 PF00155 Aminotransferase class I and II B6V88_06725 PF01368 DHH family B6V88_06725 PF02272 DHHA1 domain B6V88_06730 PF01207 Dihydrouridine synthase (Dus) B6V88_06735 PF01043 SecA preprotein cross-linking domain B6V88_06735 PF02810 SEC-C motif B6V88_06735 PF07516 SecA Wing and Scaffold domain B6V88_06735 PF07517 SecA DEAD-like domain B6V88_06740 PF00293 NUDIX domain B6V88_06755 PF00881 Nitroreductase family B6V88_06755 PF11809 B6V88_06755 B6V88_06760 PF00730 HhH-GPD superfamily base excision DNA repair protein B6V88_06770 PF00892 EamA-like transporter family B6V88_06780 PF07072 Protein of unknown function (DUF1342) B6V88_06785 PF01121 Dephospho-CoA kinase B6V88_06795 PF00563 EAL domain B6V88_06800 PF00202 Aminotransferase class-III B6V88_06805 PF04055 Radical SAM superfamily B6V88_06805 PF06968 Biotin and Thiamin Synthesis associated domain B6V88_06810 PF00155 Aminotransferase class I and II B6V88_06815 PF00561 alpha/beta hydrolase fold B6V88_06820 PF13500 AAA domain B6V88_06825 PF09723 B6V88_06825 B6V88_06830 PF04367 B6V88_06830 B6V88_06835 PF00152 tRNA synthetases class II (D, K and N) B6V88_06835 PF01336 OB-fold nucleic acid binding domain B6V88_06835 PF02938 GAD domain B6V88_06840 PF00924 Mechanosensitive ion channel B6V88_06845 PF02976 DNA mismatch repair enzyme MutH B6V88_06855 PF08975 Domain of unknown function (DUF1868) B6V88_06865 PF00011 Hsp20/alpha crystallin family B6V88_06870 PF10116 B6V88_06870 B6V88_06875 PF00115 Cytochrome C and Quinol oxidase polypeptide I B6V88_06900 PF00106 short chain dehydrogenase B6V88_06905 PF01243 Pyridoxamine 5'-phosphate oxidase B6V88_06905 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region B6V88_06910 PF00884 Sulfatase B6V88_06910 PF11893 B6V88_06910 B6V88_06915 PF05118 Aspartyl/Asparaginyl beta-hydroxylase B6V88_06920 PF02567 Phenazine biosynthesis-like protein B6V88_06925 PF00108 Thiolase, N-terminal domain B6V88_06925 PF02803 Thiolase, C-terminal domain B6V88_06940 PF01757 B6V88_06940 B6V88_06945 PF04173 B6V88_06945 B6V88_06945 PF07680 B6V88_06945 B6V88_06950 PF01494 FAD binding domain B6V88_06955 PF02735 Ku70/Ku80 beta-barrel domain B6V88_06960 PF00571 CBS domain B6V88_06965 PF08348 B6V88_06965 B6V88_06965 PF13309 B6V88_06965 B6V88_06970 PF00291 Pyridoxal-phosphate dependent enzyme B6V88_06975 PF02423 Ornithine cyclodeaminase/mu-crystallin family B6V88_07005 PF01943 B6V88_07005 B6V88_07035 PF00463 Isocitrate lyase family B6V88_07040 PF01274 Malate synthase B6V88_07065 PF10711 B6V88_07065 B6V88_07070 PF01569 PAP2 superfamily B6V88_07075 PF07690 Major Facilitator Superfamily B6V88_07080 PF03702 Uncharacterised protein family (UPF0075) B6V88_07085 PF07690 Major Facilitator Superfamily B6V88_07090 PF01026 TatD related DNase B6V88_07100 PF09115 DNA polymerase III, delta subunit, C terminal B6V88_07100 PF13177 DNA polymerase III, delta subunit B6V88_07105 PF02223 Thymidylate kinase B6V88_07110 PF02618 YceG-like family B6V88_07115 PF00109 Beta-ketoacyl synthase, N-terminal domain B6V88_07115 PF02801 Beta-ketoacyl synthase, C-terminal domain B6V88_07120 PF00550 Phosphopantetheine attachment site B6V88_07125 PF13561 Enoyl-(Acyl carrier protein) reductase B6V88_07130 PF00698 Acyl transferase domain B6V88_07135 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal B6V88_07135 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III B6V88_07140 PF02504 Fatty acid synthesis protein B6V88_07145 PF01783 Ribosomal L32p protein family B6V88_07150 PF02620 B6V88_07150 B6V88_07155 PF03054 tRNA methyl transferase B6V88_07160 PF01521 Iron-sulphur cluster biosynthesis B6V88_07165 PF03734 L,D-transpeptidase catalytic domain B6V88_07170 PF00929 Exonuclease B6V88_07175 PF00075 RNase H B6V88_07180 PF00106 short chain dehydrogenase B6V88_07185 PF00221 Aromatic amino acid lyase B6V88_07190 PF01175 Urocanase B6V88_07190 PF17391 B6V88_07190 B6V88_07190 PF17392 B6V88_07190 B6V88_07195 PF00854 POT family B6V88_07205 PF12536 B6V88_07205 B6V88_07210 PF01734 Patatin-like phospholipase B6V88_07220 PF02410 Oligomerisation domain B6V88_07225 PF02590 Predicted SPOUT methyltransferase B6V88_07235 PF01098 B6V88_07235 B6V88_07240 PF03051 Peptidase C1-like family B6V88_07245 PF01351 Ribonuclease HII B6V88_07250 PF01408 Oxidoreductase family, NAD-binding Rossmann fold B6V88_07255 PF02684 B6V88_07255 B6V88_07260 PF02954 Bacterial regulatory protein, Fis family B6V88_07265 PF00183 Hsp90 protein B6V88_07265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B6V88_07270 PF01062 B6V88_07270 B6V88_07280 PF01734 Patatin-like phospholipase B6V88_07285 PF00120 Glutamine synthetase, catalytic domain B6V88_07285 PF03951 Glutamine synthetase, beta-Grasp domain B6V88_07290 PF00482 Type II secretion system (T2SS), protein F B6V88_07295 PF13472 GDSL-like Lipase/Acylhydrolase family B6V88_07300 PF07963 Prokaryotic N-terminal methylation motif B6V88_07300 PF08334 Type II secretion system (T2SS), protein G B6V88_07305 PF07963 Prokaryotic N-terminal methylation motif B6V88_07310 PF02501 Type II secretion system (T2SS), protein I B6V88_07310 PF07963 Prokaryotic N-terminal methylation motif B6V88_07315 PF07963 Prokaryotic N-terminal methylation motif B6V88_07315 PF11612 Type II secretion system (T2SS), protein J B6V88_07320 PF03934 Type II secretion system (T2SS), protein K B6V88_07325 PF08238 Sel1 repeat B6V88_07330 PF00106 short chain dehydrogenase B6V88_07340 PF00849 RNA pseudouridylate synthase B6V88_07340 PF01479 S4 domain B6V88_07345 PF04079 Putative transcriptional regulators (Ypuh-like) B6V88_07350 PF02616 ScpA/B protein B6V88_07355 PF00579 tRNA synthetases class I (W and Y) B6V88_07360 PF01300 Telomere recombination B6V88_07365 PF02811 PHP domain B6V88_07370 PF00221 Aromatic amino acid lyase B6V88_07375 PF00072 Response regulator receiver domain B6V88_07380 PF02562 PhoH-like protein B6V88_07385 PF02130 Uncharacterized protein family UPF0054 B6V88_07390 PF00571 CBS domain B6V88_07390 PF03471 Transporter associated domain B6V88_07395 PF00072 Response regulator receiver domain B6V88_07395 PF00486 Transcriptional regulatory protein, C terminal B6V88_07400 PF00512 His Kinase A (phospho-acceptor) domain B6V88_07400 PF00672 HAMP domain B6V88_07400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B6V88_07410 PF13857 Ankyrin repeats (many copies) B6V88_07415 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region B6V88_07420 PF01048 Phosphorylase superfamily B6V88_07425 PF01791 DeoC/LacD family aldolase B6V88_07430 PF01040 UbiA prenyltransferase family B6V88_07435 PF04345 Chorismate lyase B6V88_07440 PF00497 Bacterial extracellular solute-binding proteins, family 3 B6V88_07450 PF07566 Domain of Unknown Function (DUF1543) B6V88_07455 PF07963 Prokaryotic N-terminal methylation motif B6V88_07460 PF03167 Uracil DNA glycosylase superfamily B6V88_07465 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family B6V88_07470 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family B6V88_07475 PF13176 Tetratricopeptide repeat B6V88_07480 PF06305 B6V88_07480 B6V88_07485 PF00575 S1 RNA binding domain B6V88_07490 PF02224 Cytidylate kinase B6V88_07495 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) B6V88_07505 PF00521 DNA gyrase/topoisomerase IV, subunit A B6V88_07505 PF03989 DNA gyrase C-terminal domain, beta-propeller B6V88_07510 PF00285 Citrate synthase B6V88_07520 PF00370 FGGY family of carbohydrate kinases, N-terminal domain B6V88_07520 PF02782 FGGY family of carbohydrate kinases, C-terminal domain B6V88_07525 PF01266 FAD dependent oxidoreductase B6V88_07525 PF16901 B6V88_07525 B6V88_07530 PF00085 Thioredoxin B6V88_07535 PF00406 Adenylate kinase B6V88_07535 PF05191 Adenylate kinase, active site lid B6V88_07545 PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB B6V88_07550 PF04107 Glutamate-cysteine ligase family 2(GCS2) B6V88_07555 PF00583 Acetyltransferase (GNAT) family B6V88_07560 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain B6V88_07560 PF07992 Pyridine nucleotide-disulphide oxidoreductase B6V88_07565 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) B6V88_07565 PF00364 Biotin-requiring enzyme B6V88_07565 PF02817 e3 binding domain B6V88_07570 PF00456 Transketolase, thiamine diphosphate binding domain B6V88_07585 PF00999 Sodium/hydrogen exchanger family B6V88_07590 PF02322 B6V88_07590 B6V88_07595 PF01654 B6V88_07595 B6V88_07600 PF07690 Major Facilitator Superfamily B6V88_07605 PF00919 Uncharacterized protein family UPF0004 B6V88_07605 PF01938 TRAM domain B6V88_07605 PF04055 Radical SAM superfamily B6V88_07615 PF02578 Multi-copper polyphenol oxidoreductase laccase B6V88_07620 PF13180 PDZ domain B6V88_07620 PF13365 Trypsin-like peptidase domain B6V88_07640 PF00263 B6V88_07640 B6V88_07640 PF03958 Bacterial type II/III secretion system short domain B6V88_07645 PF00437 Type II/IV secretion system protein B6V88_07675 PF01406 tRNA synthetases class I (C) catalytic domain B6V88_07675 PF09190 DALR domain B6V88_07680 PF00749 tRNA synthetases class I (E and Q), catalytic domain B6V88_07680 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain B6V88_07685 PF00290 Tryptophan synthase alpha chain B6V88_07690 PF00291 Pyridoxal-phosphate dependent enzyme B6V88_07695 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase B6V88_07700 PF01416 tRNA pseudouridine synthase B6V88_07705 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain B6V88_07705 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain B6V88_07715 PF07786 B6V88_07715 B6V88_07725 PF00072 Response regulator receiver domain B6V88_07725 PF13426 PAS domain B6V88_07735 PF03222 Tryptophan/tyrosine permease family B6V88_07740 PF00561 alpha/beta hydrolase fold B6V88_07745 PF12706 Beta-lactamase superfamily domain B6V88_07750 PF03562 MltA specific insert domain B6V88_07750 PF06725 3D domain B6V88_07755 PF00149 Calcineurin-like phosphoesterase B6V88_07760 PF01522 Polysaccharide deacetylase B6V88_07765 PF08007 Cupin superfamily protein B6V88_07775 PF02120 Flagellar hook-length control protein FliK B6V88_07785 PF00330 Aconitase family (aconitate hydratase) B6V88_07785 PF00694 Aconitase C-terminal domain B6V88_07790 PF13520 Amino acid permease B6V88_07805 PF04264 YceI-like domain B6V88_07810 PF04264 YceI-like domain B6V88_07815 PF10048 B6V88_07815 B6V88_07830 PF00171 Aldehyde dehydrogenase family B6V88_07830 PF01619 Proline dehydrogenase B6V88_07830 PF14850 DNA-binding domain of Proline dehydrogenase B6V88_07835 PF13645 B6V88_07835 B6V88_07840 PF04352 ProQ/FINO family B6V88_07845 PF08241 Methyltransferase domain B6V88_07855 PF01546 Peptidase family M20/M25/M40 B6V88_07855 PF07687 Peptidase dimerisation domain B6V88_07860 PF04958 Arginine N-succinyltransferase beta subunit B6V88_07865 PF00171 Aldehyde dehydrogenase family B6V88_07870 PF04996 Succinylarginine dihydrolase B6V88_07875 PF01564 Spermine/spermidine synthase B6V88_07880 PF01765 Ribosome recycling factor B6V88_07885 PF00696 Amino acid kinase family B6V88_07890 PF00889 Elongation factor TS B6V88_07895 PF00318 Ribosomal protein S2 B6V88_07900 PF00999 Sodium/hydrogen exchanger family B6V88_07905 PF00557 Metallopeptidase family M24 B6V88_07910 PF01966 HD domain B6V88_07910 PF03445 B6V88_07910 B6V88_07910 PF08335 GlnD PII-uridylyltransferase B6V88_07915 PF14437 B6V88_07915 B6V88_07920 PF00117 Glutamine amidotransferase class-I B6V88_07920 PF00958 GMP synthase C terminal domain B6V88_07920 PF02540 NAD synthase B6V88_07925 PF00478 IMP dehydrogenase / GMP reductase domain B6V88_07925 PF00571 CBS domain B6V88_07940 PF00072 Response regulator receiver domain B6V88_07950 PF13614 AAA domain B6V88_07955 PF03776 Septum formation topological specificity factor MinE B6V88_07960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B6V88_07960 PF02770 Acyl-CoA dehydrogenase, middle domain B6V88_07960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B6V88_07960 PF09317 B6V88_07960 B6V88_07965 PF12697 Alpha/beta hydrolase family B6V88_07970 PF06691 B6V88_07970 B6V88_07975 PF00005 ABC transporter B6V88_07980 PF00528 Binding-protein-dependent transport system inner membrane component B6V88_07985 PF00528 Binding-protein-dependent transport system inner membrane component B6V88_07990 PF00107 Zinc-binding dehydrogenase B6V88_07990 PF08240 Alcohol dehydrogenase GroES-like domain B6V88_07995 PF00877 NlpC/P60 family B6V88_07995 PF12912 NLPC_P60 stabilising domain, N term B6V88_07995 PF12913 SH3 domain of the SH3b1 type B6V88_07995 PF12914 SH3 domain of SH3b2 type B6V88_08000 PF04073 Aminoacyl-tRNA editing domain B6V88_08005 PF00501 AMP-binding enzyme B6V88_08005 PF00550 Phosphopantetheine attachment site B6V88_08005 PF01553 Acyltransferase B6V88_08010 PF00654 Voltage gated chloride channel B6V88_08015 PF00117 Glutamine amidotransferase class-I B6V88_08015 PF00425 chorismate binding enzyme B6V88_08015 PF04715 Anthranilate synthase component I, N terminal region B6V88_08020 PF12796 Ankyrin repeats (3 copies) B6V88_08025 PF02686 Glu-tRNAGln amidotransferase C subunit B6V88_08030 PF01425 Amidase B6V88_08035 PF02637 GatB domain B6V88_08035 PF02934 GatB/GatE catalytic domain B6V88_08050 PF03734 L,D-transpeptidase catalytic domain B6V88_08055 PF13442 Cytochrome C oxidase, cbb3-type, subunit III B6V88_08065 PF13144 SAF-like B6V88_08070 PF04316 Anti-sigma-28 factor, FlgM B6V88_08075 PF05130 FlgN protein B6V88_08080 PF00106 short chain dehydrogenase B6V88_08085 PF00857 Isochorismatase family B6V88_08090 PF01371 Trp repressor protein B6V88_08095 PF01634 ATP phosphoribosyltransferase B6V88_08095 PF08029 HisG, C-terminal domain B6V88_08100 PF00815 Histidinol dehydrogenase B6V88_08105 PF00155 Aminotransferase class I and II B6V88_08110 PF00475 Imidazoleglycerol-phosphate dehydratase B6V88_08110 PF08645 Polynucleotide kinase 3 phosphatase B6V88_08115 PF00117 Glutamine amidotransferase class-I B6V88_08120 PF00977 Histidine biosynthesis protein B6V88_08125 PF00977 Histidine biosynthesis protein B6V88_08130 PF01502 Phosphoribosyl-AMP cyclohydrolase B6V88_08130 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase B6V88_08140 PF10672 S-adenosylmethionine-dependent methyltransferase B6V88_08145 PF04381 Putative exonuclease, RdgC B6V88_08155 PF13525 Outer membrane lipoprotein B6V88_08165 PF00793 DAHP synthetase I family B6V88_08170 PF00117 Glutamine amidotransferase class-I B6V88_08170 PF06418 CTP synthase N-terminus B6V88_08175 PF00925 GTP cyclohydrolase II B6V88_08175 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase B6V88_08180 PF00677 Lumazine binding domain B6V88_08185 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region B6V88_08185 PF01872 RibD C-terminal domain B6V88_08190 PF00962 Adenosine/AMP deaminase B6V88_08195 PF01435 Peptidase family M48 B6V88_08200 PF09722 B6V88_08200 B6V88_08205 PF08808 B6V88_08205 B6V88_08215 PF07209 B6V88_08215 B6V88_08225 PF07690 Major Facilitator Superfamily B6V88_08230 PF00079 Serpin (serine protease inhibitor) B6V88_08255 PF02575 YbaB/EbfC DNA-binding family B6V88_08265 PF02575 YbaB/EbfC DNA-binding family B6V88_08270 PF13645 B6V88_08270 B6V88_08275 PF02110 Hydroxyethylthiazole kinase family B6V88_08280 PF01965 DJ-1/PfpI family B6V88_08295 PF00782 Dual specificity phosphatase, catalytic domain B6V88_08330 PF08240 Alcohol dehydrogenase GroES-like domain B6V88_08330 PF13602 Zinc-binding dehydrogenase B6V88_08335 PF00156 Phosphoribosyl transferase domain B6V88_08335 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase B6V88_08340 PF07521 RNA-metabolising metallo-beta-lactamase B6V88_08340 PF10996 Beta-Casp domain B6V88_08340 PF16661 B6V88_08340 B6V88_08355 PF03600 Citrate transporter B6V88_08360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B6V88_08360 PF03466 LysR substrate binding domain B6V88_08370 PF00211 Adenylate and Guanylate cyclase catalytic domain B6V88_08370 PF13185 GAF domain B6V88_08375 PF00892 EamA-like transporter family B6V88_08380 PF13806 Rieske-like [2Fe-2S] domain B6V88_08390 PF01636 Phosphotransferase enzyme family B6V88_08400 PF01610 B6V88_08400 B6V88_08400 PF13542 B6V88_08400 B6V88_08400 PF14690 B6V88_08400 B6V88_08405 PF00589 Phage integrase family B6V88_08405 PF13356 Domain of unknown function (DUF4102) B6V88_08410 PF07751 B6V88_08410 B6V88_08415 PF05930 Prophage CP4-57 regulatory protein (AlpA) B6V88_08435 PF01327 Polypeptide deformylase B6V88_08440 PF07690 Major Facilitator Superfamily B6V88_08455 PF00069 Protein kinase domain B6V88_08455 PF13086 AAA domain B6V88_08455 PF13087 AAA domain B6V88_08455 PF13195 B6V88_08455 B6V88_08460 PF13353 4Fe-4S single cluster domain B6V88_08465 PF07724 AAA domain (Cdc48 subfamily) B6V88_08465 PF10431 C-terminal, D2-small domain, of ClpB protein B6V88_08470 PF01381 Helix-turn-helix B6V88_08485 PF02599 Global regulator protein family B6V88_08505 PF11072 B6V88_08505 B6V88_08510 PF14348 B6V88_08510 B6V88_08515 PF09686 B6V88_08515 B6V88_08530 PF11990 B6V88_08530 B6V88_08535 PF11444 B6V88_08535 B6V88_08540 PF11920 B6V88_08540 B6V88_08555 PF01935 Domain of unknown function DUF87 B6V88_08555 PF11130 B6V88_08555 B6V88_08560 PF06834 B6V88_08560 B6V88_08570 PF07916 B6V88_08570 B6V88_08580 PF10412 Type IV secretion-system coupling protein DNA-binding domain B6V88_08580 PF12696 TraM recognition site of TraD and TraG B6V88_08585 PF13175 AAA ATPase domain B6V88_08595 PF12834 B6V88_08595 B6V88_08600 PF12834 B6V88_08600 B6V88_08600 PF12835 Integrase B6V88_08625 PF00436 Single-strand binding protein family B6V88_08630 PF07275 Antirestriction protein (ArdA) B6V88_08640 PF01555 DNA methylase B6V88_08655 PF13640 2OG-Fe(II) oxygenase superfamily B6V88_08660 PF01610 B6V88_08660 B6V88_08665 PF01609 Transposase DDE domain B6V88_08665 PF02281 Transposase Tn5 dimerisation domain B6V88_08665 PF14706 Transposase DNA-binding B6V88_08680 PF01150 GDA1/CD39 (nucleoside phosphatase) family B6V88_08685 PF00753 Metallo-beta-lactamase superfamily B6V88_08685 PF03772 B6V88_08685 B6V88_08685 PF13567 B6V88_08685 B6V88_08690 PF01262 Alanine dehydrogenase/PNT, C-terminal domain B6V88_08690 PF05222 Alanine dehydrogenase/PNT, N-terminal domain B6V88_08695 PF12769 Domain of unknown function (DUF3814) B6V88_08700 PF02233 NAD(P) transhydrogenase beta subunit B6V88_08715 PF00989 PAS fold B6V88_08715 PF13426 PAS domain B6V88_08715 PF13487 HD domain B6V88_08715 PF17159 B6V88_08715 B6V88_08730 PF00009 Elongation factor Tu GTP binding domain B6V88_08730 PF03144 Elongation factor Tu domain 2 B6V88_08730 PF16658 B6V88_08730 B6V88_08735 PF16113 B6V88_08735 B6V88_08740 PF00378 Enoyl-CoA hydratase/isomerase family B6V88_08745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B6V88_08745 PF02770 Acyl-CoA dehydrogenase, middle domain B6V88_08745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B6V88_08750 PF00270 DEAD/DEAH box helicase B6V88_08750 PF00271 Helicase conserved C-terminal domain B6V88_08750 PF00570 HRDC domain B6V88_08750 PF09382 RQC domain B6V88_08750 PF16124 B6V88_08750 B6V88_08755 PF07311 Dodecin B6V88_08760 PF12697 Alpha/beta hydrolase family B6V88_08765 PF07719 Tetratricopeptide repeat B6V88_08765 PF13432 Tetratricopeptide repeat B6V88_08770 PF03918 Cytochrome C biogenesis protein B6V88_08775 PF00578 AhpC/TSA family B6V88_08780 PF01578 B6V88_08780 B6V88_08780 PF16327 B6V88_08780 B6V88_08785 PF03100 CcmE B6V88_08790 PF04995 B6V88_08790 B6V88_08795 PF01578 B6V88_08795 B6V88_08800 PF03379 B6V88_08800 B6V88_08805 PF00005 ABC transporter B6V88_08815 PF02321 Outer membrane efflux protein B6V88_08820 PF00529 HlyD family secretion protein B6V88_08820 PF16576 B6V88_08820 B6V88_08825 PF07690 Major Facilitator Superfamily B6V88_08840 PF01343 Peptidase family S49 B6V88_08840 PF08496 B6V88_08840 B6V88_08850 PF00158 Sigma-54 interaction domain B6V88_08850 PF02954 Bacterial regulatory protein, Fis family B6V88_08850 PF06490 B6V88_08850 B6V88_08860 PF01336 OB-fold nucleic acid binding domain B6V88_08860 PF02811 PHP domain B6V88_08860 PF07733 Bacterial DNA polymerase III alpha subunit B6V88_08860 PF14579 Helix-hairpin-helix motif B6V88_08865 PF00196 Bacterial regulatory proteins, luxR family B6V88_08865 PF03472 Autoinducer binding domain B6V88_08870 PF00150 Cellulase (glycosyl hydrolase family 5) B6V88_08880 PF00528 Binding-protein-dependent transport system inner membrane component B6V88_08890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle B6V88_08895 PF00533 BRCA1 C Terminus (BRCT) domain B6V88_08895 PF01653 NAD-dependent DNA ligase adenylation domain B6V88_08895 PF03119 NAD-dependent DNA ligase C4 zinc finger domain B6V88_08895 PF03120 NAD-dependent DNA ligase OB-fold domain B6V88_08895 PF12826 Helix-hairpin-helix motif B6V88_08895 PF14520 Helix-hairpin-helix domain B6V88_08905 PF16024 B6V88_08905 B6V88_08910 PF02646 B6V88_08910 B6V88_08920 PF00005 ABC transporter B6V88_08920 PF08402 TOBE domain B6V88_08925 PF00528 Binding-protein-dependent transport system inner membrane component B6V88_08935 PF13416 Bacterial extracellular solute-binding protein B6V88_08940 PF01943 B6V88_08940 B6V88_08945 PF13306 Leucine rich repeats (6 copies) B6V88_08955 PF04932 B6V88_08955 B6V88_08960 PF00535 Glycosyl transferase family 2 B6V88_08965 PF00004 ATPase family associated with various cellular activities (AAA) B6V88_08965 PF02861 Clp amino terminal domain B6V88_08965 PF07724 AAA domain (Cdc48 subfamily) B6V88_08965 PF10431 C-terminal, D2-small domain, of ClpB protein B6V88_08970 PF02617 ATP-dependent Clp protease adaptor protein ClpS B6V88_08975 PF00180 Isocitrate/isopropylmalate dehydrogenase B6V88_08980 PF00849 RNA pseudouridylate synthase B6V88_08985 PF04093 B6V88_08985 B6V88_08990 PF04085 rod shape-determining protein MreC B6V88_08995 PF06723 MreB/Mbl protein B6V88_09000 PF12836 Helix-hairpin-helix motif B6V88_09005 PF01546 Peptidase family M20/M25/M40 B6V88_09005 PF07687 Peptidase dimerisation domain B6V88_09010 PF03033 Glycosyltransferase family 28 N-terminal domain B6V88_09010 PF04101 Glycosyltransferase family 28 C-terminal domain B6V88_09015 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain B6V88_09015 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain B6V88_09020 PF00999 Sodium/hydrogen exchanger family B6V88_09025 PF00391 PEP-utilising enzyme, mobile domain B6V88_09025 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain B6V88_09025 PF02896 PEP-utilising enzyme, TIM barrel domain B6V88_09030 PF00535 Glycosyl transferase family 2 B6V88_09035 PF04794 YdjC-like protein B6V88_09040 PF02366 B6V88_09040 B6V88_09045 PF00873 AcrB/AcrD/AcrF family B6V88_09050 PF16576 B6V88_09050 B6V88_09055 PF02321 Outer membrane efflux protein B6V88_09060 PF00206 Lyase B6V88_09060 PF08328 Adenylosuccinate lyase C-terminal B6V88_09065 PF00890 FAD binding domain B6V88_09065 PF02910 Fumarate reductase flavoprotein C-term B6V88_09070 PF02445 Quinolinate synthetase A protein B6V88_09075 PF13520 Amino acid permease B6V88_09080 PF13532 2OG-Fe(II) oxygenase superfamily B6V88_09090 PF12582 B6V88_09090 B6V88_09110 PF02641 Uncharacterized ACR, COG1993 B6V88_09115 PF07690 Major Facilitator Superfamily B6V88_09120 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase B6V88_09120 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase B6V88_09125 PF03313 B6V88_09125 B6V88_09125 PF03315 Serine dehydratase beta chain B6V88_09135 PF00873 AcrB/AcrD/AcrF family B6V88_09140 PF16576 B6V88_09140 B6V88_09145 PF02321 Outer membrane efflux protein B6V88_09155 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit B6V88_09160 PF01648 4'-phosphopantetheinyl transferase superfamily B6V88_09165 PF03729 B6V88_09165 B6V88_09170 PF03099 Biotin/lipoate A/B protein ligase family B6V88_09170 PF08279 HTH domain B6V88_09175 PF02599 Global regulator protein family B6V88_09180 PF00953 Glycosyl transferase family 4 B6V88_09185 PF00342 Phosphoglucose isomerase B6V88_09190 PF01370 NAD dependent epimerase/dehydratase family B6V88_09195 PF01757 B6V88_09195 B6V88_09200 PF00534 Glycosyl transferases group 1 B6V88_09200 PF13439 Glycosyltransferase Family 4 B6V88_09205 PF01757 B6V88_09205 B6V88_09215 PF04564 U-box domain B6V88_09225 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase B6V88_09225 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase B6V88_09230 PF13354 Beta-lactamase enzyme family B6V88_09235 PF00535 Glycosyl transferase family 2 B6V88_09245 PF00535 Glycosyl transferase family 2 B6V88_09250 PF01943 B6V88_09250 B6V88_09255 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family B6V88_09260 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase B6V88_09260 PF05523 WxcM-like, C-terminal B6V88_09265 PF04321 RmlD substrate binding domain B6V88_09270 PF02706 Chain length determinant protein B6V88_09275 PF13649 Methyltransferase domain B6V88_09280 PF00854 POT family B6V88_09290 PF00483 Nucleotidyl transferase B6V88_09290 PF01050 Mannose-6-phosphate isomerase B6V88_09295 PF04055 Radical SAM superfamily B6V88_09295 PF16881 B6V88_09295 B6V88_09300 PF09360 Iron-binding zinc finger CDGSH type B6V88_09310 PF00571 CBS domain B6V88_09325 PF05433 B6V88_09325 B6V88_09325 PF16998 B6V88_09325 B6V88_09330 PF00842 Alanine racemase, C-terminal domain B6V88_09330 PF01168 Alanine racemase, N-terminal domain B6V88_09335 PF00772 DnaB-like helicase N terminal domain B6V88_09335 PF03796 DnaB-like helicase C terminal domain B6V88_09340 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) B6V88_09345 PF00176 SNF2 family N-terminal domain B6V88_09345 PF00271 Helicase conserved C-terminal domain B6V88_09345 PF04434 B6V88_09345 B6V88_09350 PF00795 Carbon-nitrogen hydrolase B6V88_09350 PF02540 NAD synthase B6V88_09365 PF13505 Outer membrane protein beta-barrel domain B6V88_09370 PF13505 Outer membrane protein beta-barrel domain B6V88_09375 PF00834 Ribulose-phosphate 3 epimerase family B6V88_09380 PF01464 Transglycosylase SLT domain B6V88_09400 PF00293 NUDIX domain B6V88_09410 PF13416 Bacterial extracellular solute-binding protein B6V88_09415 PF03009 Glycerophosphoryl diester phosphodiesterase family B6V88_09425 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase B6V88_09425 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain B6V88_09430 PF01596 O-methyltransferase B6V88_09435 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily B6V88_09435 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal B6V88_09440 PF01557 Fumarylacetoacetate (FAA) hydrolase family B6V88_09445 PF13417 Glutathione S-transferase, N-terminal domain B6V88_09460 PF00152 tRNA synthetases class II (D, K and N) B6V88_09460 PF01336 OB-fold nucleic acid binding domain B6V88_09465 PF00005 ABC transporter B6V88_09470 PF02687 B6V88_09470 B6V88_09470 PF12704 MacB-like periplasmic core domain B6V88_09475 PF00561 alpha/beta hydrolase fold B6V88_09480 PF01610 B6V88_09480 B6V88_09480 PF13542 B6V88_09480 B6V88_09480 PF14690 B6V88_09480 B6V88_09485 PF01037 AsnC family B6V88_09485 PF13412 Winged helix-turn-helix DNA-binding B6V88_09490 PF00152 tRNA synthetases class II (D, K and N) B6V88_09490 PF03590 Aspartate-ammonia ligase B6V88_09500 PF05857 B6V88_09500 B6V88_09505 PF05857 B6V88_09505 B6V88_09510 PF07238 PilZ domain B6V88_09515 PF04362 Bacterial Fe(2+) trafficking B6V88_09520 PF04227 Indigoidine synthase A like protein B6V88_09525 PF01494 FAD binding domain B6V88_09530 PF01494 FAD binding domain B6V88_09540 PF01610 B6V88_09540 B6V88_09540 PF13542 B6V88_09540 B6V88_09540 PF14690 B6V88_09540 B6V88_09560 PF12834 B6V88_09560 B6V88_09585 PF00436 Single-strand binding protein family B6V88_09595 PF00589 Phage integrase family B6V88_09615 PF13637 Ankyrin repeats (many copies) B6V88_09620 PF00512 His Kinase A (phospho-acceptor) domain B6V88_09620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B6V88_09640 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) B6V88_09645 PF12802 MarR family B6V88_09650 PF03562 MltA specific insert domain B6V88_09650 PF06725 3D domain B6V88_09655 PF02129 X-Pro dipeptidyl-peptidase (S15 family) B6V88_09655 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain B6V88_09660 PF00313 'Cold-shock' DNA-binding domain B6V88_09665 PF13091 PLD-like domain B6V88_09675 PF12796 Ankyrin repeats (3 copies) B6V88_09675 PF13637 Ankyrin repeats (many copies) B6V88_09680 PF00781 Diacylglycerol kinase catalytic domain B6V88_09685 PF12850 Calcineurin-like phosphoesterase superfamily domain B6V88_09690 PF00295 Glycosyl hydrolases family 28 B6V88_09695 PF00612 IQ calmodulin-binding motif B6V88_09705 PF00561 alpha/beta hydrolase fold B6V88_09715 PF01661 Macro domain B6V88_09725 PF02627 Carboxymuconolactone decarboxylase family B6V88_09735 PF01222 B6V88_09735 B6V88_09750 PF03176 MMPL family B6V88_09760 PF03884 Domain of unknown function (DUF329) B6V88_09765 PF00583 Acetyltransferase (GNAT) family B6V88_09775 PF13308 YARHG domain B6V88_09795 PF16576 B6V88_09795 B6V88_09800 PF03412 Peptidase C39 family B6V88_09805 PF00005 ABC transporter B6V88_09805 PF00664 ABC transporter transmembrane region B6V88_09810 PF00005 ABC transporter B6V88_09810 PF00664 ABC transporter transmembrane region B6V88_09845 PF04143 B6V88_09845 B6V88_09850 PF01066 CDP-alcohol phosphatidyltransferase B6V88_09860 PF02353 Mycolic acid cyclopropane synthetase B6V88_09865 PF00199 Catalase B6V88_09865 PF06628 Catalase-related immune-responsive B6V88_09880 PF00391 PEP-utilising enzyme, mobile domain B6V88_09880 PF00581 Rhodanese-like domain B6V88_09880 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain B6V88_09885 PF01734 Patatin-like phospholipase B6V88_09885 PF12536 B6V88_09885 B6V88_09890 PF01645 Conserved region in glutamate synthase B6V88_09895 PF13230 Glutamine amidotransferases class-II B6V88_09900 PF00924 Mechanosensitive ion channel B6V88_09915 PF13520 Amino acid permease B6V88_09920 PF07690 Major Facilitator Superfamily B6V88_09925 PF03073 TspO/MBR family B6V88_09930 PF01370 NAD dependent epimerase/dehydratase family B6V88_09935 PF00875 DNA photolyase B6V88_09935 PF03441 FAD binding domain of DNA photolyase B6V88_09940 PF02222 ATP-grasp domain B6V88_09945 PF00731 AIR carboxylase B6V88_09955 PF10070 B6V88_09955 B6V88_09960 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains B6V88_09960 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus B6V88_09965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B6V88_09965 PF03466 LysR substrate binding domain B6V88_09975 PF13437 HlyD family secretion protein B6V88_09975 PF13533 Biotin-lipoyl like B6V88_09980 PF02321 Outer membrane efflux protein B6V88_09985 PF00011 Hsp20/alpha crystallin family B6V88_09990 PF00205 Thiamine pyrophosphate enzyme, central domain B6V88_09990 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain B6V88_09990 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain B6V88_09995 PF00375 Sodium:dicarboxylate symporter family B6V88_10005 PF01515 Phosphate acetyl/butaryl transferase B6V88_10005 PF01575 MaoC like domain B6V88_10010 PF13561 Enoyl-(Acyl carrier protein) reductase B6V88_10015 PF00122 E1-E2 ATPase B6V88_10015 PF00690 Cation transporter/ATPase, N-terminus B6V88_10015 PF00702 haloacid dehalogenase-like hydrolase B6V88_10050 PF00571 CBS domain B6V88_10050 PF02163 Peptidase family M50 B6V88_10055 PF00583 Acetyltransferase (GNAT) family B6V88_10075 PF07517 SecA DEAD-like domain B6V88_10080 PF11188 B6V88_10080 B6V88_10085 PF13443 Cro/C1-type HTH DNA-binding domain B6V88_10090 PF05960 Bacterial protein of unknown function (DUF885) B6V88_10100 PF00132 Bacterial transferase hexapeptide (six repeats) B6V88_10105 PF07690 Major Facilitator Superfamily B6V88_10110 PF00437 Type II/IV secretion system protein B6V88_10125 PF04632 B6V88_10125 B6V88_10130 PF00529 HlyD family secretion protein B6V88_10130 PF16576 B6V88_10130 B6V88_10150 PF07963 Prokaryotic N-terminal methylation motif B6V88_10155 PF00155 Aminotransferase class I and II B6V88_10160 PF01329 Pterin 4 alpha carbinolamine dehydratase B6V88_10165 PF02355 Protein export membrane protein B6V88_10165 PF07549 SecD/SecF GG Motif B6V88_10170 PF02355 Protein export membrane protein B6V88_10170 PF07549 SecD/SecF GG Motif B6V88_10170 PF13721 SecD export protein N-terminal TM region B6V88_10175 PF02699 Preprotein translocase subunit B6V88_10180 PF01702 Queuine tRNA-ribosyltransferase B6V88_10185 PF02547 Queuosine biosynthesis protein B6V88_10190 PF08895 B6V88_10190 B6V88_10200 PF00035 Double-stranded RNA binding motif B6V88_10200 PF14622 Ribonuclease-III-like B6V88_10205 PF00717 Peptidase S24-like B6V88_10210 PF00009 Elongation factor Tu GTP binding domain B6V88_10210 PF00679 Elongation factor G C-terminus B6V88_10210 PF03144 Elongation factor Tu domain 2 B6V88_10210 PF06421 GTP-binding protein LepA C-terminus B6V88_10215 PF13406 Transglycosylase SLT domain B6V88_10220 PF05134 Type II secretion system (T2SS), protein L B6V88_10220 PF12693 GspL periplasmic domain B6V88_10225 PF04612 Type II secretion system (T2SS), protein M B6V88_10230 PF05036 Sporulation related domain B6V88_10235 PF01966 HD domain B6V88_10235 PF13286 Phosphohydrolase-associated domain B6V88_10255 PF01522 Polysaccharide deacetylase B6V88_10265 PF03886 Protein of unknown function (DUF330) B6V88_10270 PF02470 B6V88_10270 B6V88_10275 PF02405 B6V88_10275 B6V88_10285 PF17171 B6V88_10285 B6V88_10285 PF17172 B6V88_10285 B6V88_10290 PF02810 SEC-C motif B6V88_10295 PF01313 B6V88_10295 B6V88_10300 PF01311 B6V88_10300 B6V88_10305 PF01312 FlhB HrpN YscU SpaS Family B6V88_10310 PF00771 FHIPEP family B6V88_10315 PF06429 Flagellar basal body rod FlgEFG protein C-terminal B6V88_10320 PF06429 Flagellar basal body rod FlgEFG protein C-terminal B6V88_10325 PF02107 B6V88_10325 B6V88_10330 PF02119 B6V88_10330 B6V88_10335 PF00460 Flagella basal body rod protein B6V88_10340 PF06429 Flagellar basal body rod FlgEFG protein C-terminal B6V88_10345 PF02049 B6V88_10345 B6V88_10350 PF01514 Secretory protein of YscJ/FliF family B6V88_10350 PF08345 B6V88_10350 B6V88_10360 PF02108 B6V88_10360 B6V88_10365 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain B6V88_10380 PF03963 B6V88_10380 B6V88_10385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal B6V88_10390 PF01052 Surface presentation of antigens (SPOA) B6V88_10395 PF01052 Surface presentation of antigens (SPOA) B6V88_10405 PF00813 B6V88_10405 B6V88_10410 PF13181 Tetratricopeptide repeat B6V88_10410 PF13432 Tetratricopeptide repeat B6V88_10415 PF01546 Peptidase family M20/M25/M40 B6V88_10415 PF07687 Peptidase dimerisation domain B6V88_10435 PF00027 Cyclic nucleotide-binding domain B6V88_10435 PF04831 B6V88_10435 B6V88_10445 PF00271 Helicase conserved C-terminal domain B6V88_10445 PF04851 Type III restriction enzyme, res subunit B6V88_10455 PF07690 Major Facilitator Superfamily B6V88_10460 PF03781 Sulfatase-modifying factor enzyme 1 B6V88_10460 PF12867 DinB superfamily B6V88_10465 PF10017 B6V88_10465 B6V88_10470 PF12833 Helix-turn-helix domain B6V88_10475 PF00892 EamA-like transporter family B6V88_10480 PF00118 TCP-1/cpn60 chaperonin family B6V88_10485 PF00166 Chaperonin 10 Kd subunit B6V88_10490 PF02683 B6V88_10490 B6V88_10490 PF11412 Disulphide bond corrector protein DsbC B6V88_10490 PF13899 Thioredoxin-like B6V88_10495 PF00919 Uncharacterized protein family UPF0004 B6V88_10495 PF01938 TRAM domain B6V88_10495 PF04055 Radical SAM superfamily B6V88_10500 PF01230 HIT domain B6V88_10515 PF00743 Flavin-binding monooxygenase-like B6V88_10545 PF00708 Acylphosphatase B6V88_10560 PF00114 Pilin (bacterial filament) B6V88_10560 PF07963 Prokaryotic N-terminal methylation motif B6V88_10570 PF01722 BolA-like protein B6V88_10575 PF01894 Uncharacterised protein family UPF0047 B6V88_10580 PF13520 Amino acid permease B6V88_10590 PF00800 Prephenate dehydratase B6V88_10590 PF01817 Chorismate mutase type II B6V88_10600 PF02348 Cytidylyltransferase B6V88_10605 PF03966 Trm112p-like protein B6V88_10610 PF00814 Glycoprotease family B6V88_10615 PF06733 DEAD_2 B6V88_10615 PF13307 Helicase C-terminal domain B6V88_10620 PF00037 4Fe-4S binding domain B6V88_10620 PF11953 Domain of unknown function (DUF3470) B6V88_10625 PF13409 Glutathione S-transferase, N-terminal domain B6V88_10625 PF13410 Glutathione S-transferase, C-terminal domain B6V88_10630 PF08014 B6V88_10630 B6V88_10640 PF00701 Dihydrodipicolinate synthetase family B6V88_10645 PF13488 B6V88_10645 B6V88_10650 PF00106 short chain dehydrogenase B6V88_10655 PF06314 Acetoacetate decarboxylase (ADC) B6V88_10660 PF01618 B6V88_10660 B6V88_10665 PF00691 OmpA family B6V88_10665 PF13677 B6V88_10665 B6V88_10670 PF00108 Thiolase, N-terminal domain B6V88_10670 PF02803 Thiolase, C-terminal domain B6V88_10695 PF12705 PD-(D/E)XK nuclease superfamily B6V88_10700 PF01370 NAD dependent epimerase/dehydratase family B6V88_10700 PF08338 Domain of unknown function (DUF1731) B6V88_10720 PF00152 tRNA synthetases class II (D, K and N) B6V88_10725 PF01883 Domain of unknown function DUF59 B6V88_10730 PF01592 NifU-like N terminal domain B6V88_10745 PF00005 ABC transporter B6V88_10755 PF02082 Transcriptional regulator B6V88_10760 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) B6V88_10765 PF01272 Transcription elongation factor, GreA/GreB, C-term B6V88_10765 PF03449 Transcription elongation factor, N-terminal B6V88_10770 PF02142 MGS-like domain B6V88_10770 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain B6V88_10770 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain B6V88_10780 PF03739 B6V88_10780 B6V88_10785 PF03739 B6V88_10785 B6V88_10790 PF00883 Cytosol aminopeptidase family, catalytic domain B6V88_10790 PF02789 Cytosol aminopeptidase family, N-terminal domain B6V88_10795 PF04364 DNA polymerase III chi subunit, HolC B6V88_10810 PF02535 B6V88_10810 B6V88_10815 PF01649 Ribosomal protein S20 B6V88_10830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B6V88_10830 PF03466 LysR substrate binding domain B6V88_10845 PF02606 Tetraacyldisaccharide-1-P 4'-kinase B6V88_10850 PF00005 ABC transporter B6V88_10850 PF00664 ABC transporter transmembrane region B6V88_10855 PF01180 Dihydroorotate dehydrogenase B6V88_10875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B6V88_10875 PF02770 Acyl-CoA dehydrogenase, middle domain B6V88_10875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B6V88_10880 PF00108 Thiolase, N-terminal domain B6V88_10880 PF02803 Thiolase, C-terminal domain B6V88_10890 PF01039 Carboxyl transferase domain B6V88_10895 PF00378 Enoyl-CoA hydratase/isomerase family B6V88_10900 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain B6V88_10900 PF00364 Biotin-requiring enzyme B6V88_10900 PF02785 Biotin carboxylase C-terminal domain B6V88_10900 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain B6V88_10905 PF00682 HMGL-like B6V88_10910 PF00795 Carbon-nitrogen hydrolase B6V88_10915 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain B6V88_10920 PF04371 Porphyromonas-type peptidyl-arginine deiminase B6V88_10945 PF00005 ABC transporter B6V88_10945 PF09383 NIL domain B6V88_10950 PF00528 Binding-protein-dependent transport system inner membrane component B6V88_10955 PF03180 NLPA lipoprotein B6V88_10970 PF00873 AcrB/AcrD/AcrF family B6V88_10975 PF02321 Outer membrane efflux protein B6V88_10990 PF04445 Putative SAM-dependent methyltransferase B6V88_10995 PF13242 HAD-hyrolase-like B6V88_11000 PF02092 B6V88_11000 B6V88_11000 PF05746 DALR anticodon binding domain B6V88_11005 PF02091 Glycyl-tRNA synthetase alpha subunit B6V88_11010 PF01323 DSBA-like thioredoxin domain B6V88_11015 PF00580 UvrD/REP helicase N-terminal domain B6V88_11015 PF13361 UvrD-like helicase C-terminal domain B6V88_11020 PF00313 'Cold-shock' DNA-binding domain B6V88_11025 PF00762 Ferrochelatase B6V88_11030 PF00857 Isochorismatase family B6V88_11035 PF00561 alpha/beta hydrolase fold B6V88_11045 PF09907 B6V88_11045 B6V88_11060 PF13306 Leucine rich repeats (6 copies) B6V88_11075 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family B6V88_11080 PF08443 RimK-like ATP-grasp domain B6V88_11085 PF02630 SCO1/SenC B6V88_11090 PF01040 UbiA prenyltransferase family B6V88_11095 PF02628 B6V88_11095 B6V88_11105 PF02104 B6V88_11105 B6V88_11110 PF11137 B6V88_11110 B6V88_11115 PF02798 Glutathione S-transferase, N-terminal domain B6V88_11115 PF14497 Glutathione S-transferase, C-terminal domain B6V88_11125 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain B6V88_11135 PF05114 Protein of unknown function (DUF692) B6V88_11140 PF09836 Uncharacterized protein conserved in bacteria (DUF2063) B6V88_11145 PF01292 Prokaryotic cytochrome b561 B6V88_11150 PF00578 AhpC/TSA family B6V88_11150 PF02683 B6V88_11150 B6V88_11155 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain B6V88_11155 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain B6V88_11160 PF03328 HpcH/HpaI aldolase/citrate lyase family B6V88_11165 PF01575 MaoC like domain B6V88_11170 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase B6V88_11175 PF00107 Zinc-binding dehydrogenase B6V88_11175 PF08240 Alcohol dehydrogenase GroES-like domain B6V88_11180 PF04972 BON domain B6V88_11185 PF00583 Acetyltransferase (GNAT) family B6V88_11190 PF13591 MerR HTH family regulatory protein B6V88_11195 PF00226 DnaJ domain B6V88_11195 PF01556 DnaJ C terminal domain B6V88_11200 PF04480 Protein of unknown function (DUF559) B6V88_11215 PF00990 GGDEF domain B6V88_11220 PF13380 CoA binding domain B6V88_11235 PF00072 Response regulator receiver domain B6V88_11235 PF08448 PAS fold B6V88_11240 PF01522 Polysaccharide deacetylase B6V88_11245 PF01161 Phosphatidylethanolamine-binding protein B6V88_11260 PF00011 Hsp20/alpha crystallin family B6V88_11265 PF02321 Outer membrane efflux protein B6V88_11270 PF00529 HlyD family secretion protein B6V88_11270 PF16576 B6V88_11270 B6V88_11275 PF07690 Major Facilitator Superfamily B6V88_11280 PF00654 Voltage gated chloride channel B6V88_11285 PF00375 Sodium:dicarboxylate symporter family B6V88_11290 PF01728 FtsJ-like methyltransferase B6V88_11295 PF00106 short chain dehydrogenase B6V88_11300 PF03562 MltA specific insert domain B6V88_11300 PF06725 3D domain B6V88_11305 PF02502 Ribose/Galactose Isomerase B6V88_11325 PF07992 Pyridine nucleotide-disulphide oxidoreductase B6V88_11330 PF02609 Exonuclease VII small subunit B6V88_11335 PF00348 Polyprenyl synthetase B6V88_11340 PF00924 Mechanosensitive ion channel B6V88_11345 PF04307 B6V88_11345 B6V88_11350 PF00994 Probable molybdopterin binding domain B6V88_11355 PF01018 GTP1/OBG B6V88_11355 PF01926 50S ribosome-binding GTPase B6V88_11360 PF01016 Ribosomal L27 protein B6V88_11365 PF00829 Ribosomal prokaryotic L21 protein B6V88_11370 PF01386 Ribosomal L25p family B6V88_11370 PF14693 Ribosomal protein TL5, C-terminal domain B6V88_11375 PF01195 Peptidyl-tRNA hydrolase B6V88_11380 PF01926 50S ribosome-binding GTPase B6V88_11380 PF06071 Protein of unknown function (DUF933) B6V88_11385 PF00071 Ras family B6V88_11390 PF00990 GGDEF domain B6V88_11395 PF00348 Polyprenyl synthetase B6V88_11410 PF00534 Glycosyl transferases group 1 B6V88_11435 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) B6V88_11435 PF02403 Seryl-tRNA synthetase N-terminal domain B6V88_11440 PF00132 Bacterial transferase hexapeptide (six repeats) B6V88_11440 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 B6V88_11445 PF07977 FabA-like domain B6V88_11450 PF00132 Bacterial transferase hexapeptide (six repeats) B6V88_11450 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD B6V88_11455 PF03938 Outer membrane protein (OmpH-like) B6V88_11460 PF01103 Surface antigen B6V88_11460 PF07244 Surface antigen variable number repeat B6V88_11470 PF01148 Cytidylyltransferase family B6V88_11475 PF01255 Putative undecaprenyl diphosphate synthase B6V88_11485 PF01551 Peptidase family M23 B6V88_11490 PF03572 Peptidase family S41 B6V88_11490 PF13180 PDZ domain B6V88_11495 PF00962 Adenosine/AMP deaminase B6V88_11505 PF00709 Adenylosuccinate synthetase B6V88_11510 PF09838 B6V88_11510 B6V88_11515 PF01145 SPFH domain / Band 7 family B6V88_11520 PF01145 SPFH domain / Band 7 family B6V88_11520 PF12221 B6V88_11520 B6V88_11530 PF02390 Putative methyltransferase B6V88_11535 PF00830 Ribosomal L28 family B6V88_11540 PF00471 Ribosomal protein L33 B6V88_11545 PF00309 B6V88_11545 B6V88_11545 PF04552 Sigma-54, DNA binding domain B6V88_11545 PF04963 Sigma-54 factor, core binding domain B6V88_11550 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein B6V88_11555 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 B6V88_11560 PF01565 FAD binding domain B6V88_11560 PF04030 D-arabinono-1,4-lactone oxidase B6V88_11560 PF08241 Methyltransferase domain B6V88_11570 PF00381 PTS HPr component phosphorylation site B6V88_11575 PF01066 CDP-alcohol phosphatidyltransferase B6V88_11580 PF12112 Protein of unknown function (DUF3579) B6V88_11590 PF00175 Oxidoreductase NAD-binding domain B6V88_11590 PF00970 Oxidoreductase FAD-binding domain B6V88_11595 PF00274 Fructose-bisphosphate aldolase class-I B6V88_11600 PF03372 Endonuclease/Exonuclease/phosphatase family B6V88_11605 PF00082 Subtilase family B6V88_11610 PF00561 alpha/beta hydrolase fold B6V88_11615 PF01447 Thermolysin metallopeptidase, catalytic domain B6V88_11615 PF02868 Thermolysin metallopeptidase, alpha-helical domain B6V88_11615 PF07504 Fungalysin/Thermolysin Propeptide Motif B6V88_11620 PF01300 Telomere recombination B6V88_11620 PF03481 Putative GTP-binding controlling metal-binding B6V88_11625 PF00364 Biotin-requiring enzyme B6V88_11625 PF00682 HMGL-like B6V88_11625 PF02436 Conserved carboxylase domain B6V88_11630 PF01220 Dehydroquinase class II B6V88_11635 PF00364 Biotin-requiring enzyme B6V88_11640 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain B6V88_11640 PF02785 Biotin carboxylase C-terminal domain B6V88_11640 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain B6V88_11645 PF06325 Ribosomal protein L11 methyltransferase (PrmA) B6V88_11655 PF00571 CBS domain B6V88_11660 PF00122 E1-E2 ATPase B6V88_11660 PF00702 haloacid dehalogenase-like hydrolase B6V88_11665 PF02321 Outer membrane efflux protein B6V88_11670 PF16576 B6V88_11670 B6V88_11675 PF00873 AcrB/AcrD/AcrF family B6V88_11690 PF00056 lactate/malate dehydrogenase, NAD binding domain B6V88_11690 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain B6V88_11695 PF00293 NUDIX domain B6V88_11700 PF04055 Radical SAM superfamily B6V88_11700 PF06969 HemN C-terminal domain B6V88_11705 PF02660 B6V88_11705 B6V88_11710 PF00814 Glycoprotease family B6V88_11715 PF01165 Ribosomal protein S21 B6V88_11720 PF09424 Yqey-like protein B6V88_11725 PF01807 CHC2 zinc finger B6V88_11725 PF08275 DNA primase catalytic core, N-terminal domain B6V88_11725 PF08278 DNA primase DnaG DnaB-binding B6V88_11725 PF13155 Toprim-like B6V88_11730 PF00140 Sigma-70 factor, region 1 B6V88_11730 PF03979 Sigma-70 factor, region 1 B6V88_11730 PF04539 Sigma-70 region 3 B6V88_11730 PF04542 Sigma-70 region 2 B6V88_11730 PF04545 Sigma-70, region 4 B6V88_11730 PF04546 Sigma-70, non-essential region B6V88_11745 PF01610 B6V88_11745 B6V88_11745 PF13542 B6V88_11745 B6V88_11745 PF14690 B6V88_11745 B6V88_11760 PF00072 Response regulator receiver domain B6V88_11760 PF00512 His Kinase A (phospho-acceptor) domain B6V88_11760 PF01627 Hpt domain B6V88_11760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B6V88_11760 PF08448 PAS fold B6V88_11760 PF13426 PAS domain B6V88_11765 PF00501 AMP-binding enzyme B6V88_11765 PF00550 Phosphopantetheine attachment site B6V88_11765 PF00551 Formyl transferase B6V88_11765 PF00975 Thioesterase domain B6V88_11765 PF13193 AMP-binding enzyme C-terminal domain B6V88_11775 PF00583 Acetyltransferase (GNAT) family B6V88_11790 PF03486 HI0933-like protein B6V88_11825 PF13516 Leucine Rich repeat B6V88_11830 PF02985 HEAT repeat B6V88_11830 PF12717 non-SMC mitotic condensation complex subunit 1 B6V88_11850 PF13302 Acetyltransferase (GNAT) domain B6V88_11865 PF00072 Response regulator receiver domain B6V88_11865 PF00486 Transcriptional regulatory protein, C terminal B6V88_11880 PF12796 Ankyrin repeats (3 copies) B6V88_11885 PF13306 Leucine rich repeats (6 copies) B6V88_11890 PF05042 B6V88_11890 B6V88_11895 PF13087 AAA domain B6V88_11895 PF13245 Part of AAA domain B6V88_11895 PF13482 RNase_H superfamily B6V88_11900 PF00415 Regulator of chromosome condensation (RCC1) repeat B6V88_11910 PF00270 DEAD/DEAH box helicase B6V88_11910 PF00271 Helicase conserved C-terminal domain B6V88_11915 PF00487 B6V88_11915 B6V88_11915 PF01610 B6V88_11915 B6V88_11920 PF12616 B6V88_11920 B6V88_11925 PF09594 B6V88_11925 B6V88_11935 PF08210 APOBEC-like N-terminal domain B6V88_11940 PF00817 impB/mucB/samB family B6V88_11940 PF11799 impB/mucB/samB family C-terminal domain B6V88_11940 PF13438 B6V88_11940 B6V88_11945 PF00717 Peptidase S24-like B6V88_11955 PF11339 B6V88_11955 B6V88_11960 PF10677 B6V88_11960 B6V88_11965 PF13520 Amino acid permease B6V88_11970 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region B6V88_11975 PF04828 Glutathione-dependent formaldehyde-activating enzyme B6V88_11985 PF01636 Phosphotransferase enzyme family B6V88_12000 PF13419 Haloacid dehalogenase-like hydrolase B6V88_12005 PF13411 MerR HTH family regulatory protein B6V88_12005 PF14489 QueF-like protein B6V88_12005 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term B6V88_12015 PF00583 Acetyltransferase (GNAT) family B6V88_12015 PF13508 Acetyltransferase (GNAT) domain B6V88_12020 PF00583 Acetyltransferase (GNAT) family B6V88_12025 PF00109 Beta-ketoacyl synthase, N-terminal domain B6V88_12025 PF02801 Beta-ketoacyl synthase, C-terminal domain B6V88_12030 PF00109 Beta-ketoacyl synthase, N-terminal domain B6V88_12030 PF00501 AMP-binding enzyme B6V88_12030 PF00550 Phosphopantetheine attachment site B6V88_12030 PF00668 Condensation domain B6V88_12030 PF00698 Acyl transferase domain B6V88_12030 PF02801 Beta-ketoacyl synthase, C-terminal domain B6V88_12030 PF07993 Male sterility protein B6V88_12030 PF08659 KR domain B6V88_12030 PF14765 Polyketide synthase dehydratase B6V88_12030 PF16197 B6V88_12030 B6V88_12035 PF01593 Flavin containing amine oxidoreductase B6V88_12040 PF00501 AMP-binding enzyme B6V88_12040 PF00550 Phosphopantetheine attachment site B6V88_12045 PF00501 AMP-binding enzyme B6V88_12050 PF00975 Thioesterase domain B6V88_12055 PF01546 Peptidase family M20/M25/M40 B6V88_12055 PF07687 Peptidase dimerisation domain B6V88_12060 PF07690 Major Facilitator Superfamily B6V88_12065 PF00106 short chain dehydrogenase B6V88_12070 PF14196 B6V88_12070 B6V88_12075 PF00109 Beta-ketoacyl synthase, N-terminal domain B6V88_12075 PF00550 Phosphopantetheine attachment site B6V88_12075 PF00698 Acyl transferase domain B6V88_12075 PF02801 Beta-ketoacyl synthase, C-terminal domain B6V88_12075 PF07993 Male sterility protein B6V88_12075 PF16197 B6V88_12075 B6V88_12080 PF00501 AMP-binding enzyme B6V88_12080 PF00550 Phosphopantetheine attachment site B6V88_12080 PF00668 Condensation domain B6V88_12080 PF13193 AMP-binding enzyme C-terminal domain B6V88_12100 PF07883 Cupin domain B6V88_12110 PF07690 Major Facilitator Superfamily B6V88_12115 PF01814 Hemerythrin HHE cation binding domain B6V88_12120 PF13847 Methyltransferase domain B6V88_12125 PF00583 Acetyltransferase (GNAT) family B6V88_12125 PF04229 GrpB protein B6V88_12130 PF13302 Acetyltransferase (GNAT) domain B6V88_12135 PF01725 Ham1 family B6V88_12140 PF13414 TPR repeat B6V88_12140 PF13432 Tetratricopeptide repeat B6V88_12140 PF13489 Methyltransferase domain B6V88_12140 PF14559 Tetratricopeptide repeat B6V88_12145 PF00990 GGDEF domain B6V88_12150 PF01063 Aminotransferase class IV B6V88_12155 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain B6V88_12155 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I B6V88_12155 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II B6V88_12155 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III B6V88_12160 PF00692 dUTPase B6V88_12170 PF04002 RadC-like JAB domain B6V88_12185 PF12146 Putative lysophospholipase B6V88_12190 PF00497 Bacterial extracellular solute-binding proteins, family 3 B6V88_12195 PF13230 Glutamine amidotransferases class-II B6V88_12200 PF13442 Cytochrome C oxidase, cbb3-type, subunit III B6V88_12205 PF00724 NADH:flavin oxidoreductase / NADH oxidase family B6V88_12215 PF00586 AIR synthase related protein, N-terminal domain B6V88_12215 PF02769 AIR synthase related protein, C-terminal domain B6V88_12220 PF00586 AIR synthase related protein, N-terminal domain B6V88_12220 PF02769 AIR synthase related protein, C-terminal domain B6V88_12225 PF13507 CobB/CobQ-like glutamine amidotransferase domain B6V88_12230 PF01259 SAICAR synthetase B6V88_12235 PF13522 Glutamine amidotransferase domain B6V88_12240 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain B6V88_12240 PF02843 Phosphoribosylglycinamide synthetase, C domain B6V88_12240 PF02844 Phosphoribosylglycinamide synthetase, N domain B6V88_12245 PF00551 Formyl transferase B6V88_12250 PF00583 Acetyltransferase (GNAT) family B6V88_12255 PF02600 Disulfide bond formation protein DsbB B6V88_12270 PF02627 Carboxymuconolactone decarboxylase family B6V88_12280 PF04991 B6V88_12280 B6V88_12285 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain B6V88_12285 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain B6V88_12305 PF01738 Dienelactone hydrolase family B6V88_12310 PF02834 LigT like Phosphoesterase B6V88_12315 PF12697 Alpha/beta hydrolase family B6V88_12320 PF12698 ABC-2 family transporter protein B6V88_12325 PF00005 ABC transporter B6V88_12330 PF13437 HlyD family secretion protein B6V88_12330 PF13533 Biotin-lipoyl like B6V88_12335 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain B6V88_12335 PF07992 Pyridine nucleotide-disulphide oxidoreductase B6V88_12340 PF00132 Bacterial transferase hexapeptide (six repeats) B6V88_12375 PF07690 Major Facilitator Superfamily B6V88_12390 PF12169 DNA polymerase III subunits gamma and tau domain III B6V88_12390 PF12170 DNA polymerase III tau subunit V interacting with alpha B6V88_12390 PF13177 DNA polymerase III, delta subunit B6V88_12395 PF02575 YbaB/EbfC DNA-binding family B6V88_12405 PF04784 B6V88_12405 B6V88_12410 PF05368 NmrA-like family B6V88_12420 PF00072 Response regulator receiver domain B6V88_12420 PF00486 Transcriptional regulatory protein, C terminal B6V88_12430 PF00211 Adenylate and Guanylate cyclase catalytic domain B6V88_12440 PF00485 Phosphoribulokinase / Uridine kinase family B6V88_12445 PF00448 SRP54-type protein, GTPase domain B6V88_12445 PF02881 SRP54-type protein, helical bundle domain B6V88_12445 PF02978 Signal peptide binding domain B6V88_12450 PF00886 Ribosomal protein S16 B6V88_12455 PF01782 RimM N-terminal domain B6V88_12455 PF05239 PRC-barrel domain B6V88_12460 PF01746 tRNA (Guanine-1)-methyltransferase B6V88_12465 PF01245 Ribosomal protein L19 B6V88_12470 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain B6V88_12480 PF01863 Protein of unknown function DUF45 B6V88_12485 PF13640 2OG-Fe(II) oxygenase superfamily B6V88_12490 PF00005 ABC transporter B6V88_12495 PF01061 B6V88_12495 B6V88_12510 PF09523 B6V88_12510 B6V88_12520 PF01316 Arginine repressor, DNA binding domain B6V88_12520 PF02863 Arginine repressor, C-terminal domain B6V88_12525 PF00497 Bacterial extracellular solute-binding proteins, family 3 B6V88_12530 PF00528 Binding-protein-dependent transport system inner membrane component B6V88_12535 PF00005 ABC transporter B6V88_12545 PF00206 Lyase B6V88_12545 PF14698 Argininosuccinate lyase C-terminal B6V88_12550 PF00117 Glutamine amidotransferase class-I B6V88_12550 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain B6V88_12560 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain B6V88_12560 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain B6V88_12580 PF00621 RhoGEF domain B6V88_12590 PF01544 CorA-like Mg2+ transporter protein B6V88_12595 PF07043 B6V88_12595 B6V88_12600 PF01435 Peptidase family M48 B6V88_12605 PF04011 LemA family B6V88_12610 PF08543 Phosphomethylpyrimidine kinase B6V88_12615 PF02110 Hydroxyethylthiazole kinase family B6V88_12620 PF02581 Thiamine monophosphate synthase/TENI B6V88_12625 PF00072 Response regulator receiver domain B6V88_12625 PF00486 Transcriptional regulatory protein, C terminal B6V88_12640 PF00005 ABC transporter B6V88_12650 PF04972 BON domain B6V88_12655 PF14539 Domain of unknown function (DUF4442) B6V88_12660 PF09594 B6V88_12660 B6V88_12665 PF09594 B6V88_12665 B6V88_12670 PF13529 Peptidase_C39 like family B6V88_12675 PF08443 RimK-like ATP-grasp domain B6V88_12675 PF14401 B6V88_12675 B6V88_12680 PF04107 Glutamate-cysteine ligase family 2(GCS2) B6V88_12685 PF05013 N-formylglutamate amidohydrolase B6V88_12690 PF11380 B6V88_12690 B6V88_12700 PF13847 Methyltransferase domain B6V88_12705 PF13523 Acetyltransferase (GNAT) domain B6V88_12715 PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) B6V88_12720 PF14526 Integron-associated effector binding protein B6V88_12725 PF00027 Cyclic nucleotide-binding domain B6V88_12730 PF00582 Universal stress protein family B6V88_12735 PF00293 NUDIX domain B6V88_12750 PF03788 B6V88_12750 B6V88_12755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B6V88_12755 PF03466 LysR substrate binding domain B6V88_12765 PF13670 B6V88_12765 B6V88_12775 PF00072 Response regulator receiver domain B6V88_12775 PF00512 His Kinase A (phospho-acceptor) domain B6V88_12775 PF01627 Hpt domain B6V88_12775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B6V88_12775 PF08448 PAS fold B6V88_12780 PF00501 AMP-binding enzyme B6V88_12780 PF00550 Phosphopantetheine attachment site B6V88_12780 PF00668 Condensation domain B6V88_12780 PF07993 Male sterility protein B6V88_12780 PF13193 AMP-binding enzyme C-terminal domain B6V88_12785 PF00072 Response regulator receiver domain B6V88_12785 PF00512 His Kinase A (phospho-acceptor) domain B6V88_12785 PF01627 Hpt domain B6V88_12785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B6V88_12785 PF08448 PAS fold B6V88_12790 PF16715 B6V88_12790 B6V88_12800 PF01476 LysM domain B6V88_12800 PF05593 B6V88_12800 B6V88_12805 PF05593 B6V88_12805 B6V88_12820 PF07202 T-complex protein 10 C-terminus B6V88_12825 PF05872 B6V88_12825 B6V88_12830 PF01475 Ferric uptake regulator family B6V88_12835 PF04355 SmpA / OmlA family B6V88_12840 PF00857 Isochorismatase family B6V88_12845 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family B6V88_12850 PF03658 RnfH family Ubiquitin B6V88_12855 PF03364 Polyketide cyclase / dehydrase and lipid transport B6V88_12860 PF02230 Phospholipase/Carboxylesterase B6V88_12865 PF13930 DNA/RNA non-specific endonuclease B6V88_12870 PF13627 B6V88_12870 B6V88_12875 PF01678 Diaminopimelate epimerase B6V88_12880 PF02080 TrkA-C domain B6V88_12880 PF02254 TrkA-N domain B6V88_12900 PF02683 B6V88_12900 B6V88_12900 PF13899 Thioredoxin-like B6V88_12905 PF00497 Bacterial extracellular solute-binding proteins, family 3 B6V88_12920 PF03279 B6V88_12920 B6V88_12925 PF00109 Beta-ketoacyl synthase, N-terminal domain B6V88_12925 PF02801 Beta-ketoacyl synthase, C-terminal domain B6V88_12930 PF00109 Beta-ketoacyl synthase, N-terminal domain B6V88_12930 PF02801 Beta-ketoacyl synthase, C-terminal domain B6V88_12935 PF07977 FabA-like domain B6V88_12940 PF00550 Phosphopantetheine attachment site B6V88_12945 PF00817 impB/mucB/samB family B6V88_12945 PF11799 impB/mucB/samB family C-terminal domain B6V88_12955 PF12060 B6V88_12955 B6V88_12960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily B6V88_12970 PF05013 N-formylglutamate amidohydrolase B6V88_12975 PF13561 Enoyl-(Acyl carrier protein) reductase B6V88_12980 PF07690 Major Facilitator Superfamily B6V88_12985 PF00436 Single-strand binding protein family B6V88_12995 PF01196 Ribosomal protein L17 B6V88_13000 PF01000 RNA polymerase Rpb3/RpoA insert domain B6V88_13000 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain B6V88_13000 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain B6V88_13005 PF00163 Ribosomal protein S4/S9 N-terminal domain B6V88_13005 PF01479 S4 domain B6V88_13010 PF00411 Ribosomal protein S11 B6V88_13015 PF00416 Ribosomal protein S13/S18 B6V88_13020 PF00444 Ribosomal protein L36 B6V88_13025 PF00344 SecY translocase B6V88_13030 PF00828 Ribosomal protein L18e/L15 B6V88_13035 PF00327 Ribosomal protein L30p/L7e B6V88_13040 PF00333 Ribosomal protein S5, N-terminal domain B6V88_13040 PF03719 Ribosomal protein S5, C-terminal domain B6V88_13045 PF00861 Ribosomal L18p/L5e family B6V88_13050 PF00347 Ribosomal protein L6 B6V88_13055 PF00410 Ribosomal protein S8 B6V88_13060 PF00253 Ribosomal protein S14p/S29e B6V88_13065 PF00281 Ribosomal protein L5 B6V88_13065 PF00673 ribosomal L5P family C-terminus B6V88_13070 PF00467 KOW motif B6V88_13070 PF17136 B6V88_13070 B6V88_13075 PF00238 Ribosomal protein L14p/L23e B6V88_13080 PF00366 Ribosomal protein S17 B6V88_13085 PF00831 Ribosomal L29 protein B6V88_13090 PF00252 Ribosomal protein L16p/L10e B6V88_13095 PF00189 Ribosomal protein S3, C-terminal domain B6V88_13095 PF07650 KH domain B6V88_13100 PF00237 Ribosomal protein L22p/L17e B6V88_13105 PF00203 Ribosomal protein S19 B6V88_13110 PF00181 Ribosomal Proteins L2, RNA binding domain B6V88_13110 PF03947 Ribosomal Proteins L2, C-terminal domain B6V88_13115 PF00276 Ribosomal protein L23 B6V88_13120 PF00573 Ribosomal protein L4/L1 family B6V88_13125 PF00297 Ribosomal protein L3 B6V88_13130 PF00338 Ribosomal protein S10p/S20e B6V88_13135 PF00009 Elongation factor Tu GTP binding domain B6V88_13135 PF03143 Elongation factor Tu C-terminal domain B6V88_13135 PF03144 Elongation factor Tu domain 2 B6V88_13140 PF00009 Elongation factor Tu GTP binding domain B6V88_13140 PF00679 Elongation factor G C-terminus B6V88_13140 PF03144 Elongation factor Tu domain 2 B6V88_13140 PF03764 Elongation factor G, domain IV B6V88_13140 PF14492 Elongation Factor G, domain II B6V88_13145 PF00177 Ribosomal protein S7p/S5e B6V88_13150 PF00164 Ribosomal protein S12/S23 B6V88_13155 PF00623 RNA polymerase Rpb1, domain 2 B6V88_13155 PF04983 RNA polymerase Rpb1, domain 3 B6V88_13155 PF04997 RNA polymerase Rpb1, domain 1 B6V88_13155 PF04998 RNA polymerase Rpb1, domain 5 B6V88_13155 PF05000 RNA polymerase Rpb1, domain 4 B6V88_13160 PF00562 RNA polymerase Rpb2, domain 6 B6V88_13160 PF04560 RNA polymerase Rpb2, domain 7 B6V88_13160 PF04561 RNA polymerase Rpb2, domain 2 B6V88_13160 PF04563 RNA polymerase beta subunit B6V88_13160 PF04565 RNA polymerase Rpb2, domain 3 B6V88_13160 PF10385 RNA polymerase beta subunit external 1 domain B6V88_13165 PF00542 Ribosomal protein L7/L12 C-terminal domain B6V88_13165 PF16320 B6V88_13165 B6V88_13170 PF00466 Ribosomal protein L10 B6V88_13175 PF00687 Ribosomal protein L1p/L10e family B6V88_13180 PF00298 Ribosomal protein L11, RNA binding domain B6V88_13180 PF03946 Ribosomal protein L11, N-terminal domain B6V88_13185 PF00467 KOW motif B6V88_13185 PF02357 Transcription termination factor nusG B6V88_13190 PF00584 SecE/Sec61-gamma subunits of protein translocation complex B6V88_13200 PF00009 Elongation factor Tu GTP binding domain B6V88_13200 PF03143 Elongation factor Tu C-terminal domain B6V88_13200 PF03144 Elongation factor Tu domain 2 B6V88_13245 PF00186 Dihydrofolate reductase B6V88_13250 PF04166 Pyridoxal phosphate biosynthetic protein PdxA B6V88_13255 PF00639 PPIC-type PPIASE domain B6V88_13255 PF09312 SurA N-terminal domain B6V88_13255 PF13616 PPIC-type PPIASE domain B6V88_13260 PF03968 OstA-like protein B6V88_13260 PF04453 Organic solvent tolerance protein B6V88_13265 PF01636 Phosphotransferase enzyme family B6V88_13270 PF00483 Nucleotidyl transferase B6V88_13280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain B6V88_13280 PF02770 Acyl-CoA dehydrogenase, middle domain B6V88_13280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain B6V88_13280 PF09317 B6V88_13280 B6V88_13290 PF02417 B6V88_13290 B6V88_13295 PF02503 Polyphosphate kinase middle domain B6V88_13295 PF13089 Polyphosphate kinase N-terminal domain B6V88_13295 PF13090 Polyphosphate kinase C-terminal domain B6V88_13300 PF13353 4Fe-4S single cluster domain B6V88_13305 PF01132 Elongation factor P (EF-P) OB domain B6V88_13305 PF08207 Elongation factor P (EF-P) KOW-like domain B6V88_13305 PF09285 Elongation factor P, C-terminal B6V88_13320 PF04461 Protein of unknown function (DUF520) B6V88_13335 PF01557 Fumarylacetoacetate (FAA) hydrolase family B6V88_13340 PF04315 B6V88_13340 B6V88_13345 PF10727 Rossmann-like domain B6V88_13345 PF10728 Domain of unknown function (DUF2520) B6V88_13350 PF00483 Nucleotidyl transferase B6V88_13355 PF16363 B6V88_13355 B6V88_13360 PF00132 Bacterial transferase hexapeptide (six repeats) B6V88_13370 PF04248 Domain of unknown function (DUF427) B6V88_13375 PF12694 Putative molybdenum carrier B6V88_13380 PF00856 SET domain B6V88_13380 PF12796 Ankyrin repeats (3 copies) B6V88_13385 PF07739 TipAS antibiotic-recognition domain B6V88_13385 PF13411 MerR HTH family regulatory protein B6V88_13395 PF00881 Nitroreductase family B6V88_13400 PF00497 Bacterial extracellular solute-binding proteins, family 3 B6V88_13420 PF13649 Methyltransferase domain B6V88_13430 PF03306 Alpha-acetolactate decarboxylase B6V88_13435 PF00205 Thiamine pyrophosphate enzyme, central domain B6V88_13435 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain B6V88_13435 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain B6V88_13440 PF13561 Enoyl-(Acyl carrier protein) reductase B6V88_13445 PF04244 Deoxyribodipyrimidine photo-lyase-related protein B6V88_13450 PF01794 B6V88_13450 B6V88_13450 PF08022 B6V88_13450 B6V88_13455 PF00173 Cytochrome b5-like Heme/Steroid binding domain B6V88_13465 PF04632 B6V88_13465 B6V88_13465 PF13515 B6V88_13465 B6V88_13470 PF13673 Acetyltransferase (GNAT) domain B6V88_13475 PF00501 AMP-binding enzyme B6V88_13475 PF00550 Phosphopantetheine attachment site B6V88_13475 PF00975 Thioesterase domain B6V88_13480 PF00072 Response regulator receiver domain B6V88_13480 PF00512 His Kinase A (phospho-acceptor) domain B6V88_13480 PF01627 Hpt domain B6V88_13480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B6V88_13480 PF08448 PAS fold B6V88_13500 PF08867 B6V88_13500 B6V88_13505 PF01420 Type I restriction modification DNA specificity domain B6V88_13510 PF02384 N-6 DNA Methylase B6V88_13510 PF12161 HsdM N-terminal domain B6V88_13515 PF01420 Type I restriction modification DNA specificity domain B6V88_13520 PF16263 B6V88_13520 B6V88_13525 PF04326 Divergent AAA domain B6V88_13525 PF13749 ATP-dependent DNA helicase recG C-terminal B6V88_13530 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) B6V88_13530 PF04851 Type III restriction enzyme, res subunit B6V88_13535 PF01863 Protein of unknown function DUF45 B6V88_13540 PF00717 Peptidase S24-like B6V88_13540 PF01381 Helix-turn-helix B6V88_13570 PF13356 Domain of unknown function (DUF4102) B6V88_13580 PF01432 Peptidase family M3 B6V88_13590 PF00456 Transketolase, thiamine diphosphate binding domain B6V88_13590 PF02779 Transketolase, pyrimidine binding domain B6V88_13590 PF02780 Transketolase, C-terminal domain B6V88_13595 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain B6V88_13595 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain B6V88_13600 PF00162 Phosphoglycerate kinase B6V88_13605 PF00224 Pyruvate kinase, barrel domain B6V88_13605 PF02887 Pyruvate kinase, alpha/beta domain B6V88_13615 PF00005 ABC transporter B6V88_13615 PF09821 B6V88_13615 B6V88_13620 PF00528 Binding-protein-dependent transport system inner membrane component B6V88_13625 PF11393 B6V88_13625 B6V88_13630 PF12158 B6V88_13630 B6V88_13640 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily B6V88_13645 PF01571 Aminomethyltransferase folate-binding domain B6V88_13645 PF08669 Glycine cleavage T-protein C-terminal barrel domain B6V88_13650 PF01597 Glycine cleavage H-protein B6V88_13655 PF02347 Glycine cleavage system P-protein B6V88_13660 PF03795 YCII-related domain B6V88_13665 PF02347 Glycine cleavage system P-protein B6V88_13670 PF00563 EAL domain B6V88_13670 PF08668 HDOD domain B6V88_13680 PF02582 B6V88_13680 B6V88_13685 PF00860 Permease family B6V88_13695 PF00583 Acetyltransferase (GNAT) family B6V88_13700 PF00109 Beta-ketoacyl synthase, N-terminal domain B6V88_13700 PF02801 Beta-ketoacyl synthase, C-terminal domain B6V88_13705 PF00132 Bacterial transferase hexapeptide (six repeats) B6V88_13705 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD B6V88_13710 PF00476 DNA polymerase family A B6V88_13710 PF01367 5'-3' exonuclease, C-terminal SAM fold B6V88_13710 PF01612 3'-5' exonuclease B6V88_13710 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain B6V88_13715 PF01431 Peptidase family M13 B6V88_13715 PF05649 Peptidase family M13 B6V88_13725 PF02261 Aspartate decarboxylase B6V88_13745 PF00206 Lyase B6V88_13745 PF10415 Fumarase C C-terminus B6V88_13750 PF05088 B6V88_13750 B6V88_13755 PF01070 FMN-dependent dehydrogenase B6V88_13775 PF00923 Transaldolase B6V88_13780 PF01904 Protein of unknown function DUF72 B6V88_13785 PF00497 Bacterial extracellular solute-binding proteins, family 3 B6V88_13795 PF00176 SNF2 family N-terminal domain B6V88_13795 PF00271 Helicase conserved C-terminal domain B6V88_13795 PF12137 RNA polymerase recycling family C-terminal B6V88_13800 PF01546 Peptidase family M20/M25/M40 B6V88_13800 PF07687 Peptidase dimerisation domain B6V88_13805 PF13302 Acetyltransferase (GNAT) domain B6V88_13810 PF00005 ABC transporter B6V88_13815 PF00528 Binding-protein-dependent transport system inner membrane component B6V88_13815 PF04069 Substrate binding domain of ABC-type glycine betaine transport system B6V88_13820 PF00885 6,7-dimethyl-8-ribityllumazine synthase B6V88_13825 PF00885 6,7-dimethyl-8-ribityllumazine synthase B6V88_13835 PF00375 Sodium:dicarboxylate symporter family B6V88_13840 PF00072 Response regulator receiver domain B6V88_13855 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) B6V88_13865 PF02321 Outer membrane efflux protein B6V88_13870 PF00873 AcrB/AcrD/AcrF family B6V88_13875 PF00873 AcrB/AcrD/AcrF family B6V88_13880 PF16576 B6V88_13880 B6V88_13885 PF00291 Pyridoxal-phosphate dependent enzyme B6V88_13895 PF12146 Putative lysophospholipase B6V88_13900 PF08123 Histone methylation protein DOT1 B6V88_13905 PF00216 Bacterial DNA-binding protein B6V88_13910 PF00692 dUTPase B6V88_13915 PF01145 SPFH domain / Band 7 family B6V88_13930 PF05150 B6V88_13930 B6V88_13935 PF05150 B6V88_13935 B6V88_13940 PF00691 OmpA family B6V88_13945 PF01979 Amidohydrolase family B6V88_13950 PF00929 Exonuclease B6V88_13955 PF00578 AhpC/TSA family B6V88_13955 PF10417 C-terminal domain of 1-Cys peroxiredoxin B6V88_13960 PF00462 Glutaredoxin B6V88_13965 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain B6V88_13965 PF02777 Iron/manganese superoxide dismutases, C-terminal domain B6V88_13970 PF00202 Aminotransferase class-III B6V88_13975 PF00588 SpoU rRNA Methylase family B6V88_13975 PF08032 RNA 2'-O ribose methyltransferase substrate binding B6V88_13980 PF00575 S1 RNA binding domain B6V88_13980 PF00773 RNB domain B6V88_13980 PF08206 Ribonuclease B OB domain B6V88_13990 PF00497 Bacterial extracellular solute-binding proteins, family 3 B6V88_13995 PF10677 B6V88_13995 B6V88_14000 PF04343 B6V88_14000 B6V88_14005 PF04463 B6V88_14005 B6V88_14010 PF05057 Putative serine esterase (DUF676) B6V88_14015 PF14063 B6V88_14015 B6V88_14025 PF05618 Putative ATP-dependant zinc protease B6V88_14030 PF14400 B6V88_14030 B6V88_14030 PF14402 B6V88_14030 B6V88_14035 PF14397 B6V88_14035 B6V88_14040 PF05677 B6V88_14040 B6V88_14045 PF13640 2OG-Fe(II) oxygenase superfamily B6V88_14050 PF07690 Major Facilitator Superfamily B6V88_14055 PF00069 Protein kinase domain B6V88_14060 PF04392 ABC transporter substrate binding protein B6V88_14065 PF00939 Sodium:sulfate symporter transmembrane region B6V88_14070 PF08241 Methyltransferase domain B6V88_14085 PF01951 Archease protein family (MTH1598/TM1083) B6V88_14095 PF00856 SET domain B6V88_14105 PF00696 Amino acid kinase family B6V88_14105 PF01472 PUA domain B6V88_14110 PF03051 Peptidase C1-like family B6V88_14115 PF00149 Calcineurin-like phosphoesterase B6V88_14120 PF07514 Putative helicase B6V88_14120 PF07515 Protein of unknown function (DUF1528) B6V88_14125 PF00398 Ribosomal RNA adenine dimethylase B6V88_14130 PF00072 Response regulator receiver domain B6V88_14135 PF00902 Sec-independent protein translocase protein (TatC) B6V88_14140 PF16363 B6V88_14140 B6V88_14145 PF00534 Glycosyl transferases group 1 B6V88_14150 PF00534 Glycosyl transferases group 1 B6V88_14150 PF13439 Glycosyltransferase Family 4 B6V88_14150 PF13489 Methyltransferase domain B6V88_14155 PF00535 Glycosyl transferase family 2 B6V88_14165 PF01757 B6V88_14165 B6V88_14170 PF00483 Nucleotidyl transferase B6V88_14175 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family B6V88_14180 PF00535 Glycosyl transferase family 2 B6V88_14185 PF01370 NAD dependent epimerase/dehydratase family B6V88_14190 PF04138 B6V88_14190 B6V88_14195 PF00205 Thiamine pyrophosphate enzyme, central domain B6V88_14195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain B6V88_14195 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain B6V88_14210 PF00535 Glycosyl transferase family 2 B6V88_14215 PF03706 B6V88_14215 B6V88_14220 PF01593 Flavin containing amine oxidoreductase B6V88_14235 PF16822 B6V88_14235 B6V88_14240 PF03062 B6V88_14240 B6V88_14245 PF16363 B6V88_14245 B6V88_14250 PF00483 Nucleotidyl transferase B6V88_14250 PF01050 Mannose-6-phosphate isomerase B6V88_14255 PF16363 B6V88_14255 B6V88_14260 PF01370 NAD dependent epimerase/dehydratase family B6V88_14265 PF00535 Glycosyl transferase family 2 B6V88_14275 PF08755 Hemimethylated DNA-binding protein YccV like B6V88_14285 PF00175 Oxidoreductase NAD-binding domain B6V88_14290 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase B6V88_14295 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain B6V88_14295 PF07497 Rho termination factor, RNA-binding domain B6V88_14295 PF07498 Rho termination factor, N-terminal domain B6V88_14300 PF00085 Thioredoxin B6V88_14305 PF04452 RNA methyltransferase B6V88_14310 PF00206 Lyase B6V88_14310 PF10415 Fumarase C C-terminus B6V88_14315 PF03009 Glycerophosphoryl diester phosphodiesterase family B6V88_14330 PF02666 B6V88_14330 B6V88_14345 PF00083 Sugar (and other) transporter B6V88_14355 PF00521 DNA gyrase/topoisomerase IV, subunit A B6V88_14355 PF03989 DNA gyrase C-terminal domain, beta-propeller B6V88_14360 PF04463 B6V88_14360 B6V88_14360 PF08349 B6V88_14360 B6V88_14365 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain B6V88_14365 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain B6V88_14370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain B6V88_14370 PF02874 ATP synthase alpha/beta family, beta-barrel domain B6V88_14375 PF00231 ATP synthase B6V88_14385 PF00213 ATP synthase delta (OSCP) subunit B6V88_14390 PF00430 ATP synthase B/B' CF(0) B6V88_14395 PF00137 ATP synthase subunit C B6V88_14400 PF00119 ATP synthase A chain B6V88_14405 PF03899 B6V88_14405 B6V88_14415 PF04972 BON domain B6V88_14420 PF04972 BON domain B6V88_14425 PF13580 SIS domain B6V88_14430 PF02021 Uncharacterised protein family UPF0102 B6V88_14435 PF04348 LppC putative lipoprotein B6V88_14440 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases B6V88_14445 PF01734 Patatin-like phospholipase B6V88_14445 PF12536 B6V88_14445 B6V88_14460 PF01926 50S ribosome-binding GTPase B6V88_14460 PF10396 GTP-binding protein TrmE N-terminus B6V88_14460 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE B6V88_14465 PF02096 60Kd inner membrane protein B6V88_14465 PF14849 YidC periplasmic domain B6V88_14470 PF01809 B6V88_14470 B6V88_14475 PF00825 Ribonuclease P B6V88_14480 PF00468 Ribosomal protein L34