CA604_00005 PF00308 Bacterial dnaA protein CA604_00005 PF08299 Bacterial dnaA protein helix-turn-helix CA604_00005 PF11638 DnaA N-terminal domain CA604_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CA604_00010 PF02767 DNA polymerase III beta subunit, central domain CA604_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CA604_00015 PF00204 DNA gyrase B CA604_00015 PF00986 DNA gyrase B subunit, carboxyl terminus CA604_00015 PF01751 Toprim domain CA604_00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA604_00020 PF00849 RNA pseudouridylate synthase CA604_00025 PF00005 ABC transporter CA604_00030 PF00528 Binding-protein-dependent transport system inner membrane component CA604_00035 PF00528 Binding-protein-dependent transport system inner membrane component CA604_00035 PF12911 CA604_00035 CA604_00040 PF00005 ABC transporter CA604_00040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CA604_00045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CA604_00050 PF09992 Predicted periplasmic protein (DUF2233) CA604_00055 PF00580 UvrD/REP helicase N-terminal domain CA604_00055 PF01443 Viral (Superfamily 1) RNA helicase CA604_00060 PF00175 Oxidoreductase NAD-binding domain CA604_00060 PF00970 Oxidoreductase FAD-binding domain CA604_00065 PF06097 CA604_00065 CA604_00070 PF01131 DNA topoisomerase CA604_00070 PF01751 Toprim domain CA604_00070 PF13342 CA604_00070 CA604_00075 PF04055 Radical SAM superfamily CA604_00075 PF06969 HemN C-terminal domain CA604_00080 PF13679 CA604_00080 CA604_00085 PF00749 tRNA synthetases class I (E and Q), catalytic domain CA604_00090 PF04361 CA604_00090 CA604_00095 PF11738 Protein of unknown function (DUF3298) CA604_00100 PF13462 Thioredoxin CA604_00105 PF05036 Sporulation related domain CA604_00110 PF00750 tRNA synthetases class I (R) CA604_00110 PF03485 Arginyl tRNA synthetase N terminal domain CA604_00110 PF05746 DALR anticodon binding domain CA604_00115 PF08895 CA604_00115 CA604_00120 PF00682 HMGL-like CA604_00120 PF08502 LeuA allosteric (dimerisation) domain CA604_00135 PF04324 BFD-like [2Fe-2S] binding domain CA604_00140 PF00210 Ferritin-like domain CA604_00150 PF00009 Elongation factor Tu GTP binding domain CA604_00150 PF16658 CA604_00150 CA604_00155 PF04011 LemA family CA604_00160 PF04536 TLP18 CA604_00165 PF04536 TLP18 CA604_00170 PF01926 50S ribosome-binding GTPase CA604_00170 PF11981 CA604_00170 CA604_00175 PF11067 CA604_00175 CA604_00180 PF06803 CA604_00180 CA604_00185 PF04226 CA604_00185 CA604_00190 PF03956 CA604_00190 CA604_00195 PF00497 Bacterial extracellular solute-binding proteins, family 3 CA604_00200 PF00528 Binding-protein-dependent transport system inner membrane component CA604_00205 PF00528 Binding-protein-dependent transport system inner membrane component CA604_00210 PF00005 ABC transporter CA604_00215 PF01925 CA604_00215 CA604_00220 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme CA604_00230 PF01040 UbiA prenyltransferase family CA604_00235 PF07399 CA604_00235 CA604_00240 PF00152 tRNA synthetases class II (D, K and N) CA604_00240 PF01336 OB-fold nucleic acid binding domain CA604_00240 PF02938 GAD domain CA604_00255 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CA604_00260 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CA604_00265 PF03099 Biotin/lipoate A/B protein ligase family CA604_00270 PF03309 Type III pantothenate kinase CA604_00280 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CA604_00285 PF00768 D-alanyl-D-alanine carboxypeptidase CA604_00285 PF07943 Penicillin-binding protein 5, C-terminal domain CA604_00290 PF01063 Aminotransferase class IV CA604_00295 PF04359 Protein of unknown function (DUF493) CA604_00300 PF03099 Biotin/lipoate A/B protein ligase family CA604_00305 PF04355 SmpA / OmlA family CA604_00315 PF04055 Radical SAM superfamily CA604_00315 PF16881 CA604_00315 CA604_00320 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CA604_00320 PF16363 CA604_00320 CA604_00325 PF07690 Major Facilitator Superfamily CA604_00330 PF00132 Bacterial transferase hexapeptide (six repeats) CA604_00330 PF12804 MobA-like NTP transferase domain CA604_00335 PF00293 NUDIX domain CA604_00340 PF00140 Sigma-70 factor, region 1 CA604_00340 PF04542 Sigma-70 region 2 CA604_00340 PF04545 Sigma-70, region 4 CA604_00350 PF00270 DEAD/DEAH box helicase CA604_00350 PF00271 Helicase conserved C-terminal domain CA604_00350 PF03880 DbpA RNA binding domain CA604_00355 PF00551 Formyl transferase CA604_00355 PF02911 Formyl transferase, C-terminal domain CA604_00360 PF01189 NOL1/NOP2/sun family CA604_00365 PF14334 CA604_00365 CA604_00370 PF00512 His Kinase A (phospho-acceptor) domain CA604_00370 PF00672 HAMP domain CA604_00370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA604_00375 PF00072 Response regulator receiver domain CA604_00380 PF02080 TrkA-C domain CA604_00380 PF02254 TrkA-N domain CA604_00385 PF02386 Cation transport protein CA604_00390 PF00588 SpoU rRNA Methylase family CA604_00395 PF00156 Phosphoribosyl transferase domain CA604_00400 PF08241 Methyltransferase domain CA604_00405 PF06996 CA604_00405 CA604_00410 PF00004 ATPase family associated with various cellular activities (AAA) CA604_00410 PF07724 AAA domain (Cdc48 subfamily) CA604_00410 PF10431 C-terminal, D2-small domain, of ClpB protein CA604_00425 PF12790 Type VI secretion lipoprotein CA604_00430 PF05936 CA604_00430 CA604_00435 PF00691 OmpA family CA604_00435 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) CA604_00440 PF06744 CA604_00440 CA604_00440 PF06761 CA604_00440 CA604_00440 PF14331 CA604_00440 CA604_00445 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) CA604_00450 PF08308 CA604_00450 CA604_00455 PF06812 CA604_00455 CA604_00460 PF05591 CA604_00460 CA604_00465 PF05943 CA604_00465 CA604_00470 PF05638 Protein of unknown function (DUF796) CA604_00475 PF07024 ImpE protein CA604_00480 PF04965 Gene 25-like lysozyme CA604_00485 PF05947 CA604_00485 CA604_00490 PF12059 CA604_00490 CA604_00495 PF00593 TonB dependent receptor CA604_00495 PF07715 TonB-dependent Receptor Plug Domain CA604_00550 PF05954 Phage late control gene D protein (GPD) CA604_00570 PF09937 CA604_00570 CA604_00570 PF13599 Pentapeptide repeats (9 copies) CA604_00575 PF00805 Pentapeptide repeats (8 copies) CA604_00575 PF13599 Pentapeptide repeats (9 copies) CA604_00580 PF12059 CA604_00580 CA604_00585 PF13665 CA604_00585 CA604_00630 PF14113 Domain of unknown function (DUF4285) CA604_00640 PF14113 Domain of unknown function (DUF4285) CA604_00685 PF10908 CA604_00685 CA604_00695 PF14113 Domain of unknown function (DUF4285) CA604_00725 PF02556 Preprotein translocase subunit SecB CA604_00730 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CA604_00730 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CA604_00735 PF00462 Glutaredoxin CA604_00740 PF00581 Rhodanese-like domain CA604_00745 PF00300 Histidine phosphatase superfamily (branch 1) CA604_00750 PF01551 Peptidase family M23 CA604_00755 PF03572 Peptidase family S41 CA604_00755 PF13180 PDZ domain CA604_00760 PF00899 ThiF family CA604_00765 PF03480 Bacterial extracellular solute-binding protein, family 7 CA604_00770 PF05299 M61 glycyl aminopeptidase CA604_00770 PF13180 PDZ domain CA604_00775 PF03899 CA604_00775 CA604_00780 PF00119 ATP synthase A chain CA604_00785 PF00137 ATP synthase subunit C CA604_00790 PF00430 ATP synthase B/B' CF(0) CA604_00795 PF00213 ATP synthase delta (OSCP) subunit CA604_00800 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CA604_00800 PF00306 ATP synthase alpha/beta chain, C terminal domain CA604_00800 PF02874 ATP synthase alpha/beta family, beta-barrel domain CA604_00805 PF00231 ATP synthase CA604_00810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CA604_00810 PF02874 ATP synthase alpha/beta family, beta-barrel domain CA604_00815 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CA604_00820 PF16695 CA604_00820 CA604_00835 PF00005 ABC transporter CA604_00845 PF16149 CA604_00845 CA604_00850 PF06808 CA604_00850 CA604_00855 PF04290 CA604_00855 CA604_00860 PF03480 Bacterial extracellular solute-binding protein, family 7 CA604_00865 PF02492 CobW/HypB/UreG, nucleotide-binding domain CA604_00865 PF07683 Cobalamin synthesis protein cobW C-terminal domain CA604_00870 PF01475 Ferric uptake regulator family CA604_00875 PF00005 ABC transporter CA604_00880 PF00950 CA604_00880 CA604_00885 PF03797 Autotransporter beta-domain CA604_00885 PF13018 CA604_00885 CA604_00890 PF00589 Phage integrase family CA604_00890 PF02899 Phage integrase, N-terminal SAM-like domain CA604_00895 PF04340 Protein of unknown function, DUF484 CA604_00900 PF01678 Diaminopimelate epimerase CA604_00905 PF02637 GatB domain CA604_00905 PF02934 GatB/GatE catalytic domain CA604_00910 PF01425 Amidase CA604_00915 PF02686 Glu-tRNAGln amidotransferase C subunit CA604_00920 PF06723 MreB/Mbl protein CA604_00925 PF04085 rod shape-determining protein MreC CA604_00930 PF04093 CA604_00930 CA604_00935 PF00905 Penicillin binding protein transpeptidase domain CA604_00935 PF03717 Penicillin-binding Protein dimerisation domain CA604_00940 PF01098 CA604_00940 CA604_00945 PF02687 CA604_00945 CA604_00950 PF00005 ABC transporter CA604_00955 PF00528 Binding-protein-dependent transport system inner membrane component CA604_00960 PF00528 Binding-protein-dependent transport system inner membrane component CA604_00965 PF00005 ABC transporter CA604_00980 PF02569 Pantoate-beta-alanine ligase CA604_00985 PF02616 ScpA/B protein CA604_00990 PF11943 CA604_00990 CA604_00995 PF00196 Bacterial regulatory proteins, luxR family CA604_01005 PF01121 Dephospho-CoA kinase CA604_01010 PF07072 Protein of unknown function (DUF1342) CA604_01015 PF00132 Bacterial transferase hexapeptide (six repeats) CA604_01020 PF00293 NUDIX domain CA604_01020 PF02581 Thiamine monophosphate synthase/TENI CA604_01025 PF05673 Protein of unknown function (DUF815) CA604_01030 PF00348 Polyprenyl synthetase CA604_01035 PF00920 Dehydratase family CA604_01040 PF01018 GTP1/OBG CA604_01040 PF01926 50S ribosome-binding GTPase CA604_01045 PF13449 Esterase-like activity of phytase CA604_01050 PF11604 Copper binding periplasmic protein CusF CA604_01055 PF00004 ATPase family associated with various cellular activities (AAA) CA604_01055 PF07724 AAA domain (Cdc48 subfamily) CA604_01055 PF10431 C-terminal, D2-small domain, of ClpB protein CA604_01060 PF00227 Proteasome subunit CA604_01065 PF13449 Esterase-like activity of phytase CA604_01070 PF01258 Prokaryotic dksA/traR C4-type zinc finger CA604_01075 PF02954 Bacterial regulatory protein, Fis family CA604_01080 PF01208 Uroporphyrinogen decarboxylase (URO-D) CA604_01085 PF00270 DEAD/DEAH box helicase CA604_01085 PF00271 Helicase conserved C-terminal domain CA604_01090 PF01557 Fumarylacetoacetate (FAA) hydrolase family CA604_01100 PF01136 CA604_01100 CA604_01100 PF16325 CA604_01100 CA604_01105 PF00271 Helicase conserved C-terminal domain CA604_01105 PF04851 Type III restriction enzyme, res subunit CA604_01110 PF09827 CRISPR associated protein Cas2 CA604_01115 PF01867 CRISPR associated protein Cas1 CA604_01120 PF01930 Domain of unknown function DUF83 CA604_01125 PF05107 CA604_01125 CA604_01130 PF09709 CA604_01130 CA604_01135 PF09704 CRISPR-associated protein (Cas_Cas5) CA604_01140 PF13086 AAA domain CA604_01140 PF13087 AAA domain CA604_01145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CA604_01150 PF00528 Binding-protein-dependent transport system inner membrane component CA604_01155 PF00528 Binding-protein-dependent transport system inner membrane component CA604_01155 PF12911 CA604_01155 CA604_01160 PF00005 ABC transporter CA604_01160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CA604_01165 PF00005 ABC transporter CA604_01165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CA604_01180 PF01016 Ribosomal L27 protein CA604_01185 PF00829 Ribosomal prokaryotic L21 protein CA604_01190 PF01230 HIT domain CA604_01195 PF00834 Ribulose-phosphate 3 epimerase family CA604_01200 PF03562 MltA specific insert domain CA604_01200 PF06725 3D domain CA604_01205 PF10411 Disulfide bond isomerase protein N-terminus CA604_01205 PF13098 Thioredoxin-like domain CA604_01210 PF08534 Redoxin CA604_01215 PF04972 BON domain CA604_01220 PF13580 SIS domain CA604_01225 PF02021 Uncharacterised protein family UPF0102 CA604_01230 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CA604_01235 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel CA604_01240 PF03668 CA604_01240 CA604_01245 PF02603 HPr Serine kinase N terminus CA604_01245 PF07475 HPr Serine kinase C-terminal domain CA604_01250 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CA604_01255 PF00005 ABC transporter CA604_01255 PF12399 Branched-chain amino acid ATP-binding cassette transporter CA604_01260 PF03968 OstA-like protein CA604_01265 PF06835 Lipopolysaccharide-assembly, LptC-related CA604_01270 PF08282 haloacid dehalogenase-like hydrolase CA604_01275 PF00571 CBS domain CA604_01275 PF01380 SIS domain CA604_01280 PF00156 Phosphoribosyl transferase domain CA604_01285 PF00291 Pyridoxal-phosphate dependent enzyme CA604_01285 PF00585 C-terminal regulatory domain of Threonine dehydratase CA604_01290 PF00512 His Kinase A (phospho-acceptor) domain CA604_01290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA604_01295 PF00072 Response regulator receiver domain CA604_01295 PF00486 Transcriptional regulatory protein, C terminal CA604_01300 PF01209 ubiE/COQ5 methyltransferase family CA604_01310 PF03109 CA604_01310 CA604_01315 PF01467 Cytidylyltransferase CA604_01320 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CA604_01325 PF08543 Phosphomethylpyrimidine kinase CA604_01330 PF03976 Polyphosphate kinase 2 (PPK2) CA604_01335 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CA604_01335 PF07992 Pyridine nucleotide-disulphide oxidoreductase CA604_01340 PF00710 Asparaginase CA604_01345 PF06508 Queuosine biosynthesis protein QueC CA604_01350 PF01242 6-pyruvoyl tetrahydropterin synthase CA604_01355 PF04055 Radical SAM superfamily CA604_01355 PF13394 4Fe-4S single cluster domain CA604_01360 PF01679 CA604_01360 CA604_01370 PF00881 Nitroreductase family CA604_01380 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CA604_01380 PF01488 Shikimate / quinate 5-dehydrogenase CA604_01380 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CA604_01385 PF00472 RF-1 domain CA604_01385 PF03462 PCRF domain CA604_01390 PF13847 Methyltransferase domain CA604_01395 PF00462 Glutaredoxin CA604_01400 PF02441 Flavoprotein CA604_01405 PF07264 Etoposide-induced protein 2 CA604_01410 PF00939 Sodium:sulfate symporter transmembrane region CA604_01415 PF01266 FAD dependent oxidoreductase CA604_01445 PF00202 Aminotransferase class-III CA604_01450 PF00155 Aminotransferase class I and II CA604_01455 PF04301 CA604_01455 CA604_01460 PF13489 Methyltransferase domain CA604_01465 PF13500 AAA domain CA604_01470 PF03009 Glycerophosphoryl diester phosphodiesterase family CA604_01475 PF00107 Zinc-binding dehydrogenase CA604_01475 PF08240 Alcohol dehydrogenase GroES-like domain CA604_01480 PF11692 CA604_01480 CA604_01485 PF06092 CA604_01485 CA604_01490 PF01169 CA604_01490 CA604_01495 PF04575 CA604_01495 CA604_01500 PF14489 QueF-like protein CA604_01500 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CA604_01505 PF01298 Transferrin binding protein-like solute binding protein CA604_01505 PF17483 CA604_01505 CA604_01505 PF17484 CA604_01505 CA604_01510 PF00593 TonB dependent receptor CA604_01510 PF07715 TonB-dependent Receptor Plug Domain CA604_01515 PF01171 PP-loop family CA604_01520 PF02152 Dihydroneopterin aldolase CA604_01525 PF07992 Pyridine nucleotide-disulphide oxidoreductase CA604_01530 PF13091 PLD-like domain CA604_01530 PF13396 CA604_01530 CA604_01535 PF00528 Binding-protein-dependent transport system inner membrane component CA604_01540 PF00528 Binding-protein-dependent transport system inner membrane component CA604_01545 PF00497 Bacterial extracellular solute-binding proteins, family 3 CA604_01550 PF06912 CA604_01550 CA604_01555 PF04055 Radical SAM superfamily CA604_01555 PF06968 Biotin and Thiamin Synthesis associated domain CA604_01560 PF00582 Universal stress protein family CA604_01565 PF00929 Exonuclease CA604_01570 PF00929 Exonuclease CA604_01575 PF13561 Enoyl-(Acyl carrier protein) reductase CA604_01580 PF00551 Formyl transferase CA604_01580 PF01842 ACT domain CA604_01605 PF01510 N-acetylmuramoyl-L-alanine amidase CA604_01615 PF01578 CA604_01615 CA604_01620 PF00448 SRP54-type protein, GTPase domain CA604_01620 PF02881 SRP54-type protein, helical bundle domain CA604_01620 PF02978 Signal peptide binding domain CA604_01625 PF01476 LysM domain CA604_01625 PF04972 BON domain CA604_01630 PF02390 Putative methyltransferase CA604_01635 PF01588 Putative tRNA binding domain CA604_01635 PF08264 Anticodon-binding domain of tRNA CA604_01635 PF09334 tRNA synthetases class I (M) CA604_01645 PF10609 ParA/MinD ATPase like CA604_01650 PF01103 Surface antigen CA604_01650 PF07244 Surface antigen variable number repeat CA604_01650 PF17243 CA604_01650 CA604_01655 PF04357 CA604_01655 CA604_01660 PF00692 dUTPase CA604_01665 PF03486 HI0933-like protein CA604_01670 PF01717 Cobalamin-independent synthase, Catalytic domain CA604_01675 PF01571 Aminomethyltransferase folate-binding domain CA604_01675 PF08669 Glycine cleavage T-protein C-terminal barrel domain CA604_01680 PF01597 Glycine cleavage H-protein CA604_01685 PF02347 Glycine cleavage system P-protein CA604_01690 PF00303 Thymidylate synthase CA604_01695 PF00186 Dihydrofolate reductase CA604_01700 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CA604_01700 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CA604_01700 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CA604_01705 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CA604_01705 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CA604_01705 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CA604_01705 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CA604_01710 PF01565 FAD binding domain CA604_01710 PF02913 FAD linked oxidases, C-terminal domain CA604_01720 PF03550 Outer membrane lipoprotein LolB CA604_01725 PF00288 GHMP kinases N terminal domain CA604_01725 PF08544 GHMP kinases C terminal CA604_01735 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CA604_01735 PF14572 Phosphoribosyl synthetase-associated domain CA604_01740 PF01386 Ribosomal L25p family CA604_01740 PF14693 Ribosomal protein TL5, C-terminal domain CA604_01745 PF03895 YadA-like C-terminal region CA604_01745 PF05658 Head domain of trimeric autotransporter adhesin CA604_01745 PF05662 Coiled stalk of trimeric autotransporter adhesin CA604_01745 PF13018 CA604_01745 CA604_01750 PF03895 YadA-like C-terminal region CA604_01750 PF05662 Coiled stalk of trimeric autotransporter adhesin CA604_01750 PF13018 CA604_01750 CA604_01760 PF03895 YadA-like C-terminal region CA604_01760 PF05662 Coiled stalk of trimeric autotransporter adhesin CA604_01765 PF03895 YadA-like C-terminal region CA604_01765 PF05662 Coiled stalk of trimeric autotransporter adhesin CA604_01775 PF01195 Peptidyl-tRNA hydrolase CA604_01780 PF02517 CAAX protease self-immunity CA604_01785 PF01926 50S ribosome-binding GTPase CA604_01785 PF06071 Protein of unknown function (DUF933) CA604_01790 PF12838 4Fe-4S dicluster domain CA604_01795 PF01467 Cytidylyltransferase CA604_01800 PF03602 Conserved hypothetical protein 95 CA604_01805 PF00448 SRP54-type protein, GTPase domain CA604_01805 PF02881 SRP54-type protein, helical bundle domain CA604_01810 PF01928 CYTH domain CA604_01810 PF05235 CHAD domain CA604_01815 PF01047 MarR family CA604_01820 PF00925 GTP cyclohydrolase II CA604_01820 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CA604_01825 PF00885 6,7-dimethyl-8-ribityllumazine synthase CA604_01830 PF01029 NusB family CA604_01835 PF00586 AIR synthase related protein, N-terminal domain CA604_01835 PF02769 AIR synthase related protein, C-terminal domain CA604_01840 PF04608 Phosphatidylglycerophosphatase A CA604_01845 PF02464 Competence-damaged protein CA604_01850 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CA604_01855 PF01219 Prokaryotic diacylglycerol kinase CA604_01860 PF00118 TCP-1/cpn60 chaperonin family CA604_01865 PF00166 Chaperonin 10 Kd subunit CA604_01870 PF00497 Bacterial extracellular solute-binding proteins, family 3 CA604_01880 PF04314 Protein of unknown function (DUF461) CA604_01885 PF00561 alpha/beta hydrolase fold CA604_01890 PF13174 Tetratricopeptide repeat CA604_01890 PF13432 Tetratricopeptide repeat CA604_01895 PF00691 OmpA family CA604_01900 PF04052 TolB amino-terminal domain CA604_01900 PF07676 WD40-like Beta Propeller Repeat CA604_01905 PF13103 TonB C terminal CA604_01910 PF02472 Biopolymer transport protein ExbD/TolR CA604_01915 PF01618 CA604_01915 CA604_01920 PF03061 Thioesterase superfamily CA604_01925 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CA604_01925 PF03129 Anticodon binding domain CA604_01925 PF04073 Aminoacyl-tRNA editing domain CA604_01930 PF00293 NUDIX domain CA604_01935 PF01926 50S ribosome-binding GTPase CA604_01935 PF10396 GTP-binding protein TrmE N-terminus CA604_01935 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE CA604_01945 PF05164 Cell division protein ZapA CA604_01950 PF04402 Protein of unknown function (DUF541) CA604_01955 PF01790 CA604_01955 CA604_01960 PF00171 Aldehyde dehydrogenase family CA604_01960 PF01619 Proline dehydrogenase CA604_01960 PF14850 DNA-binding domain of Proline dehydrogenase CA604_01965 PF00474 Sodium:solute symporter family CA604_01970 PF04072 Leucine carboxyl methyltransferase CA604_02010 PF03895 YadA-like C-terminal region CA604_02010 PF05658 Head domain of trimeric autotransporter adhesin CA604_02010 PF05662 Coiled stalk of trimeric autotransporter adhesin CA604_02015 PF00209 Sodium:neurotransmitter symporter family CA604_02020 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CA604_02020 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CA604_02025 PF00132 Bacterial transferase hexapeptide (six repeats) CA604_02030 PF00534 Glycosyl transferases group 1 CA604_02030 PF13439 Glycosyltransferase Family 4 CA604_02035 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CA604_02040 PF01061 CA604_02040 CA604_02045 PF00005 ABC transporter CA604_02045 PF14524 Wzt C-terminal domain CA604_02050 PF00534 Glycosyl transferases group 1 CA604_02050 PF08241 Methyltransferase domain CA604_02050 PF13439 Glycosyltransferase Family 4 CA604_02055 PF01841 Transglutaminase-like superfamily CA604_02060 PF01841 Transglutaminase-like superfamily CA604_02060 PF06662 CA604_02060 CA604_02065 PF00733 Asparagine synthase CA604_02065 PF13537 Glutamine amidotransferase domain CA604_02075 PF02350 UDP-N-acetylglucosamine 2-epimerase CA604_02080 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CA604_02085 PF02397 CA604_02085 CA604_02090 PF13440 CA604_02090 CA604_02100 PF01757 CA604_02100 CA604_02105 PF02719 Polysaccharide biosynthesis protein CA604_02105 PF13727 CoA-binding domain CA604_02110 PF03971 Monomeric isocitrate dehydrogenase CA604_02115 PF02201 SWIB/MDM2 domain CA604_02120 PF01979 Amidohydrolase family CA604_02125 PF01596 O-methyltransferase CA604_02130 PF05681 CA604_02130 CA604_02130 PF05683 Fumarase C-terminus CA604_02135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CA604_02140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CA604_02145 PF00528 Binding-protein-dependent transport system inner membrane component CA604_02150 PF00528 Binding-protein-dependent transport system inner membrane component CA604_02150 PF12911 CA604_02150 CA604_02155 PF00005 ABC transporter CA604_02155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CA604_02160 PF00005 ABC transporter CA604_02160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CA604_02165 PF08240 Alcohol dehydrogenase GroES-like domain CA604_02165 PF13602 Zinc-binding dehydrogenase CA604_02170 PF13508 Acetyltransferase (GNAT) domain CA604_02175 PF00121 Triosephosphate isomerase CA604_02180 PF03840 Preprotein translocase SecG subunit CA604_02190 PF08972 Domain of unknown function (DUF1902) CA604_02195 PF07681 CA604_02195 CA604_02200 PF00127 Copper binding proteins, plastocyanin/azurin family CA604_02205 PF13609 Gram-negative porin CA604_02210 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CA604_02215 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CA604_02220 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CA604_02225 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CA604_02230 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin CA604_02235 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CA604_02235 PF10531 SLBB domain CA604_02235 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CA604_02240 PF00384 Molybdopterin oxidoreductase CA604_02240 PF01568 Molydopterin dinucleotide binding domain CA604_02240 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CA604_02240 PF13510 2Fe-2S iron-sulfur cluster binding domain CA604_02245 PF00146 NADH dehydrogenase CA604_02250 PF12838 4Fe-4S dicluster domain CA604_02255 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CA604_02260 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CA604_02265 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CA604_02265 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CA604_02270 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CA604_02275 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CA604_02280 PF10993 CA604_02280 CA604_02285 PF12710 haloacid dehalogenase-like hydrolase CA604_02290 PF00270 DEAD/DEAH box helicase CA604_02290 PF00271 Helicase conserved C-terminal domain CA604_02290 PF02559 CarD-like/TRCF domain CA604_02290 PF03461 TRCF domain CA604_02295 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CA604_02295 PF02542 YgbB family CA604_02300 PF02627 Carboxymuconolactone decarboxylase family CA604_02305 PF00578 AhpC/TSA family CA604_02310 PF00512 His Kinase A (phospho-acceptor) domain CA604_02310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA604_02310 PF16524 CA604_02310 CA604_02315 PF00072 Response regulator receiver domain CA604_02315 PF00486 Transcriptional regulatory protein, C terminal CA604_02320 PF00583 Acetyltransferase (GNAT) family CA604_02320 PF00814 Glycoprotease family CA604_02325 PF03167 Uracil DNA glycosylase superfamily CA604_02330 PF07690 Major Facilitator Superfamily CA604_02335 PF02463 RecF/RecN/SMC N terminal domain CA604_02340 PF04354 ZipA, C-terminal FtsZ-binding domain CA604_02345 PF00533 BRCA1 C Terminus (BRCT) domain CA604_02345 PF01653 NAD-dependent DNA ligase adenylation domain CA604_02345 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CA604_02345 PF03120 NAD-dependent DNA ligase OB-fold domain CA604_02345 PF12826 Helix-hairpin-helix motif CA604_02350 PF00639 PPIC-type PPIASE domain CA604_02355 PF01722 BolA-like protein CA604_02360 PF04279 CA604_02360 CA604_02365 PF13458 Periplasmic binding protein CA604_02370 PF13458 Periplasmic binding protein CA604_02375 PF13458 Periplasmic binding protein CA604_02380 PF02653 CA604_02380 CA604_02385 PF00005 ABC transporter CA604_02385 PF02653 CA604_02385 CA604_02385 PF12399 Branched-chain amino acid ATP-binding cassette transporter CA604_02390 PF00005 ABC transporter CA604_02395 PF00633 Helix-hairpin-helix motif CA604_02395 PF00730 HhH-GPD superfamily base excision DNA repair protein CA604_02400 PF04060 Putative Fe-S cluster CA604_02400 PF14697 4Fe-4S dicluster domain CA604_02405 PF00175 Oxidoreductase NAD-binding domain CA604_02410 PF00037 4Fe-4S binding domain CA604_02410 PF11953 Domain of unknown function (DUF3470) CA604_02410 PF12800 4Fe-4S binding domain CA604_02415 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CA604_02420 PF02824 TGS domain CA604_02420 PF04607 Region found in RelA / SpoT proteins CA604_02420 PF13291 ACT domain CA604_02420 PF13328 HD domain CA604_02425 PF01039 Carboxyl transferase domain CA604_02430 PF00575 S1 RNA binding domain CA604_02430 PF10150 Ribonuclease E/G family CA604_02435 PF00849 RNA pseudouridylate synthase CA604_02435 PF01479 S4 domain CA604_02440 PF13419 Haloacid dehalogenase-like hydrolase CA604_02450 PF02545 Maf-like protein CA604_02455 PF02620 CA604_02455 CA604_02460 PF01783 Ribosomal L32p protein family CA604_02465 PF02504 Fatty acid synthesis protein CA604_02470 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CA604_02470 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CA604_02475 PF00698 Acyl transferase domain CA604_02480 PF13561 Enoyl-(Acyl carrier protein) reductase CA604_02485 PF00550 Phosphopantetheine attachment site CA604_02490 PF00109 Beta-ketoacyl synthase, N-terminal domain CA604_02490 PF02801 Beta-ketoacyl synthase, C-terminal domain CA604_02500 PF13180 PDZ domain CA604_02500 PF13365 Trypsin-like peptidase domain CA604_02505 PF00009 Elongation factor Tu GTP binding domain CA604_02505 PF00679 Elongation factor G C-terminus CA604_02505 PF03144 Elongation factor Tu domain 2 CA604_02505 PF06421 GTP-binding protein LepA C-terminus CA604_02510 PF00717 Peptidase S24-like CA604_02510 PF10502 Signal peptidase, peptidase S26 CA604_02515 PF00035 Double-stranded RNA binding motif CA604_02515 PF14622 Ribonuclease-III-like CA604_02520 PF01926 50S ribosome-binding GTPase CA604_02520 PF07650 KH domain CA604_02525 PF02565 Recombination protein O C terminal CA604_02525 PF11967 Recombination protein O N terminal CA604_02530 PF01027 Inhibitor of apoptosis-promoting Bax1 CA604_02530 PF05684 CA604_02530 CA604_02535 PF04364 DNA polymerase III chi subunit, HolC CA604_02540 PF00883 Cytosol aminopeptidase family, catalytic domain CA604_02545 PF03739 CA604_02545 CA604_02550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CA604_02550 PF03466 LysR substrate binding domain CA604_02555 PF00440 Bacterial regulatory proteins, tetR family CA604_02560 PF10087 CA604_02560 CA604_02565 PF00877 NlpC/P60 family CA604_02570 PF01946 Thi4 family CA604_02570 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase CA604_02575 PF00557 Metallopeptidase family M24 CA604_02575 PF01321 Creatinase/Prolidase N-terminal domain CA604_02575 PF16188 CA604_02575 CA604_02575 PF16189 CA604_02575 CA604_02585 PF00471 Ribosomal protein L33 CA604_02590 PF00830 Ribosomal L28 family CA604_02595 PF01554 MatE CA604_02605 PF01197 Ribosomal protein L31 CA604_02610 PF04002 RadC-like JAB domain CA604_02615 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CA604_02620 PF02401 LytB protein CA604_02625 PF02545 Maf-like protein CA604_02630 PF02590 Predicted SPOUT methyltransferase CA604_02635 PF02410 Oligomerisation domain CA604_02640 PF01467 Cytidylyltransferase CA604_02645 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CA604_02645 PF02843 Phosphoribosylglycinamide synthetase, C domain CA604_02645 PF02844 Phosphoribosylglycinamide synthetase, N domain CA604_02650 PF01709 Transcriptional regulator CA604_02655 PF05872 CA604_02655 CA604_02660 PF00316 Fructose-1-6-bisphosphatase CA604_02665 PF01433 Peptidase family M1 CA604_02665 PF11940 Domain of unknown function (DUF3458) CA604_02665 PF17432 CA604_02665 CA604_02670 PF01523 Putative modulator of DNA gyrase CA604_02675 PF03054 tRNA methyl transferase CA604_02680 PF00206 Lyase CA604_02680 PF08328 Adenylosuccinate lyase C-terminal CA604_02685 PF01322 Cytochrome C' CA604_02705 PF01645 Conserved region in glutamate synthase CA604_02715 PF00545 ribonuclease CA604_02720 PF01337 Barstar (barnase inhibitor) CA604_02730 PF00005 ABC transporter CA604_02730 PF12848 ABC transporter CA604_02730 PF16326 CA604_02730 CA604_02735 PF01471 Putative peptidoglycan binding domain CA604_02735 PF13406 Transglycosylase SLT domain CA604_02740 PF00595 PDZ domain (Also known as DHR or GLGF) CA604_02740 PF03572 Peptidase family S41 CA604_02740 PF11818 CA604_02740 CA604_02760 PF13489 Methyltransferase domain CA604_02765 PF00691 OmpA family CA604_02770 PF00521 DNA gyrase/topoisomerase IV, subunit A CA604_02770 PF03989 DNA gyrase C-terminal domain, beta-propeller CA604_02775 PF00266 Aminotransferase class-V CA604_02780 PF00800 Prephenate dehydratase CA604_02780 PF01817 Chorismate mutase type II CA604_02785 PF02153 Prephenate dehydrogenase CA604_02790 PF02224 Cytidylate kinase CA604_02795 PF00575 S1 RNA binding domain CA604_02800 PF00216 Bacterial DNA-binding protein CA604_02805 PF06305 CA604_02805 CA604_02815 PF00294 pfkB family carbohydrate kinase CA604_02820 PF12836 Helix-hairpin-helix motif CA604_02825 PF00122 E1-E2 ATPase CA604_02830 PF03597 CA604_02830 CA604_02835 PF00115 Cytochrome C and Quinol oxidase polypeptide I CA604_02840 PF02433 Cytochrome C oxidase, mono-heme subunit/FixO CA604_02845 PF05545 CA604_02845 CA604_02850 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CA604_02850 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CA604_02855 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CA604_02855 PF12801 CA604_02855 CA604_02855 PF13746 4Fe-4S dicluster domain CA604_02860 PF05751 CA604_02860 CA604_02865 PF00027 Cyclic nucleotide-binding domain CA604_02865 PF13545 Crp-like helix-turn-helix domain CA604_02870 PF07811 CA604_02870 CA604_02875 PF01430 Hsp33 protein CA604_02880 PF00132 Bacterial transferase hexapeptide (six repeats) CA604_02885 PF00501 AMP-binding enzyme CA604_02890 PF06271 CA604_02890 CA604_02895 PF01170 Putative RNA methylase family UPF0020 CA604_02895 PF02926 THUMP domain CA604_02900 PF03653 CA604_02900 CA604_02905 PF06144 DNA polymerase III, delta subunit CA604_02910 PF04390 Lipopolysaccharide-assembly CA604_02915 PF00133 tRNA synthetases class I (I, L, M and V) CA604_02915 PF08264 Anticodon-binding domain of tRNA CA604_02915 PF09334 tRNA synthetases class I (M) CA604_02915 PF13603 Leucyl-tRNA synthetase, Domain 2 CA604_02920 PF01546 Peptidase family M20/M25/M40 CA604_02925 PF08007 Cupin superfamily protein CA604_02930 PF00488 MutS domain V CA604_02930 PF01624 MutS domain I CA604_02930 PF05188 MutS domain II CA604_02930 PF05190 MutS family domain IV CA604_02930 PF05192 MutS domain III CA604_02935 PF00924 Mechanosensitive ion channel CA604_02935 PF05552 Conserved TM helix CA604_02940 PF00588 SpoU rRNA Methylase family CA604_02945 PF00459 Inositol monophosphatase family CA604_02950 PF02673 CA604_02950 CA604_02955 PF00149 Calcineurin-like phosphoesterase CA604_02960 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CA604_02965 PF00515 Tetratricopeptide repeat CA604_02965 PF13174 Tetratricopeptide repeat CA604_02970 PF01406 tRNA synthetases class I (C) catalytic domain CA604_02970 PF09190 DALR domain CA604_02975 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CA604_02980 PF01171 PP-loop family CA604_02980 PF09179 TilS substrate binding domain CA604_02990 PF05154 CA604_02990 CA604_02995 PF16868 CA604_02995 CA604_03000 PF08905 CA604_03000 CA604_03005 PF06808 CA604_03005 CA604_03015 PF00005 ABC transporter CA604_03015 PF06472 CA604_03015 CA604_03020 PF00593 TonB dependent receptor CA604_03020 PF07715 TonB-dependent Receptor Plug Domain CA604_03025 PF00696 Amino acid kinase family CA604_03025 PF01842 ACT domain CA604_03025 PF13840 ACT domain CA604_03030 PF06676 CA604_03030 CA604_03035 PF04461 Protein of unknown function (DUF520) CA604_03040 PF01132 Elongation factor P (EF-P) OB domain CA604_03040 PF08207 Elongation factor P (EF-P) KOW-like domain CA604_03040 PF09285 Elongation factor P, C-terminal CA604_03045 PF10093 CA604_03045 CA604_03050 PF00155 Aminotransferase class I and II CA604_03055 PF00330 Aconitase family (aconitate hydratase) CA604_03055 PF06434 Aconitate hydratase 2 N-terminus CA604_03055 PF11791 Aconitate B N-terminal domain CA604_03070 PF00579 tRNA synthetases class I (W and Y) CA604_03075 PF01427 D-ala-D-ala dipeptidase CA604_03080 PF01569 PAP2 superfamily CA604_03085 PF13528 Glycosyl transferase family 1 CA604_03090 PF01964 ThiC family CA604_03090 PF13667 ThiC-associated domain CA604_03100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CA604_03100 PF07497 Rho termination factor, RNA-binding domain CA604_03100 PF07498 Rho termination factor, N-terminal domain CA604_03105 PF00085 Thioredoxin CA604_03110 PF00204 DNA gyrase B CA604_03110 PF00986 DNA gyrase B subunit, carboxyl terminus CA604_03110 PF01751 Toprim domain CA604_03110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA604_03115 PF00521 DNA gyrase/topoisomerase IV, subunit A CA604_03120 PF00111 2Fe-2S iron-sulfur cluster binding domain CA604_03120 PF00175 Oxidoreductase NAD-binding domain CA604_03120 PF00970 Oxidoreductase FAD-binding domain CA604_03125 PF03524 Conjugal transfer protein CA604_03130 PF01411 tRNA synthetases class II (A) CA604_03130 PF02272 DHHA1 domain CA604_03130 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CA604_03135 PF01206 Sulfurtransferase TusA CA604_03140 PF00886 Ribosomal protein S16 CA604_03145 PF01782 RimM N-terminal domain CA604_03150 PF01746 tRNA (Guanine-1)-methyltransferase CA604_03155 PF01451 Low molecular weight phosphotyrosine protein phosphatase CA604_03160 PF02082 Transcriptional regulator CA604_03165 PF00266 Aminotransferase class-V CA604_03170 PF01592 NifU-like N terminal domain CA604_03175 PF01521 Iron-sulphur cluster biosynthesis CA604_03180 PF07743 HSCB C-terminal oligomerisation domain CA604_03185 PF00012 Hsp70 protein CA604_03190 PF00111 2Fe-2S iron-sulfur cluster binding domain CA604_03195 PF08238 Sel1 repeat CA604_03200 PF08238 Sel1 repeat CA604_03205 PF08238 Sel1 repeat CA604_03210 PF08238 Sel1 repeat CA604_03215 PF08238 Sel1 repeat CA604_03220 PF00152 tRNA synthetases class II (D, K and N) CA604_03220 PF01336 OB-fold nucleic acid binding domain CA604_03230 PF01368 DHH family CA604_03230 PF02272 DHHA1 domain CA604_03240 PF02687 CA604_03240 CA604_03240 PF12704 MacB-like periplasmic core domain CA604_03245 PF00005 ABC transporter CA604_03250 PF01494 FAD binding domain CA604_03255 PF01026 TatD related DNase CA604_03260 PF00753 Metallo-beta-lactamase superfamily CA604_03260 PF03772 CA604_03260 CA604_03260 PF13567 CA604_03260 CA604_03265 PF02811 PHP domain CA604_03270 PF01272 Transcription elongation factor, GreA/GreB, C-term CA604_03270 PF03449 Transcription elongation factor, N-terminal CA604_03275 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ CA604_03280 PF13145 PPIC-type PPIASE domain CA604_03280 PF13624 SurA N-terminal domain CA604_03285 PF01632 Ribosomal protein L35 CA604_03290 PF00453 Ribosomal protein L20 CA604_03295 PF01409 tRNA synthetases class II core domain (F) CA604_03295 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CA604_03300 PF01588 Putative tRNA binding domain CA604_03300 PF03147 Ferredoxin-fold anticodon binding domain CA604_03300 PF03483 B3/4 domain CA604_03300 PF03484 tRNA synthetase B5 domain CA604_03305 PF00216 Bacterial DNA-binding protein CA604_03310 PF13411 MerR HTH family regulatory protein CA604_03315 PF01177 Asp/Glu/Hydantoin racemase CA604_03320 PF01070 FMN-dependent dehydrogenase CA604_03325 PF00291 Pyridoxal-phosphate dependent enzyme CA604_03335 PF00580 UvrD/REP helicase N-terminal domain CA604_03335 PF13361 UvrD-like helicase C-terminal domain CA604_03340 PF09424 Yqey-like protein CA604_03350 PF00768 D-alanyl-D-alanine carboxypeptidase CA604_03355 PF02769 AIR synthase related protein, C-terminal domain CA604_03355 PF13507 CobB/CobQ-like glutamine amidotransferase domain CA604_03360 PF00478 IMP dehydrogenase / GMP reductase domain CA604_03360 PF00571 CBS domain CA604_03365 PF05940 CA604_03365 CA604_03370 PF00117 Glutamine amidotransferase class-I CA604_03370 PF00958 GMP synthase C terminal domain CA604_03370 PF02540 NAD synthase CA604_03380 PF16868 CA604_03380 CA604_03385 PF08238 Sel1 repeat CA604_03390 PF12643 CA604_03390 CA604_03405 PF00474 Sodium:solute symporter family CA604_03415 PF03806 CA604_03415 CA604_03420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CA604_03425 PF00857 Isochorismatase family CA604_03430 PF07690 Major Facilitator Superfamily CA604_03435 PF05940 CA604_03435 CA604_03440 PF00005 ABC transporter CA604_03445 PF00528 Binding-protein-dependent transport system inner membrane component CA604_03455 PF00593 TonB dependent receptor CA604_03455 PF07715 TonB-dependent Receptor Plug Domain CA604_03465 PF04575 CA604_03465 CA604_03470 PF00005 ABC transporter CA604_03470 PF00664 ABC transporter transmembrane region CA604_03475 PF00005 ABC transporter CA604_03475 PF00664 ABC transporter transmembrane region CA604_03480 PF03616 CA604_03480 CA604_03485 PF16695 CA604_03485 CA604_03490 PF14113 Domain of unknown function (DUF4285) CA604_03495 PF00390 Malic enzyme, N-terminal domain CA604_03495 PF01515 Phosphate acetyl/butaryl transferase CA604_03495 PF03949 Malic enzyme, NAD binding domain CA604_03500 PF00676 Dehydrogenase E1 component CA604_03500 PF02779 Transketolase, pyrimidine binding domain CA604_03500 PF16078 CA604_03500 CA604_03500 PF16870 CA604_03500 CA604_03505 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CA604_03505 PF00364 Biotin-requiring enzyme CA604_03505 PF02817 e3 binding domain CA604_03510 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CA604_03510 PF07992 Pyridine nucleotide-disulphide oxidoreductase CA604_03515 PF03969 AFG1-like ATPase CA604_03520 PF01078 Magnesium chelatase, subunit ChlI CA604_03520 PF13335 CA604_03520 CA604_03520 PF13541 Subunit ChlI of Mg-chelatase CA604_03525 PF03180 NLPA lipoprotein CA604_03535 PF02824 TGS domain CA604_03535 PF04607 Region found in RelA / SpoT proteins CA604_03535 PF13291 ACT domain CA604_03535 PF13328 HD domain CA604_03540 PF01192 RNA polymerase Rpb6 CA604_03545 PF00625 Guanylate kinase CA604_03550 PF02562 PhoH-like protein CA604_03550 PF13638 PIN domain CA604_03555 PF00578 AhpC/TSA family CA604_03560 PF04430 Protein of unknown function (DUF498/DUF598) CA604_03565 PF00742 Homoserine dehydrogenase CA604_03565 PF01842 ACT domain CA604_03565 PF03447 Homoserine dehydrogenase, NAD binding domain CA604_03570 PF14821 Threonine synthase N terminus CA604_03575 PF00494 Squalene/phytoene synthase CA604_03580 PF00842 Alanine racemase, C-terminal domain CA604_03580 PF01168 Alanine racemase, N-terminal domain CA604_03585 PF13481 AAA domain CA604_03585 PF13541 Subunit ChlI of Mg-chelatase CA604_03590 PF13416 Bacterial extracellular solute-binding protein CA604_03595 PF00005 ABC transporter CA604_03595 PF08402 TOBE domain CA604_03600 PF00528 Binding-protein-dependent transport system inner membrane component CA604_03605 PF00528 Binding-protein-dependent transport system inner membrane component CA604_03610 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CA604_03615 PF01895 PhoU domain CA604_03620 PF04362 Bacterial Fe(2+) trafficking CA604_03625 PF00271 Helicase conserved C-terminal domain CA604_03625 PF04408 Helicase associated domain (HA2) CA604_03625 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CA604_03625 PF11898 CA604_03625 CA604_03630 PF02811 PHP domain CA604_03630 PF07733 Bacterial DNA polymerase III alpha subunit CA604_03630 PF14579 Helix-hairpin-helix motif CA604_03635 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CA604_03640 PF00005 ABC transporter CA604_03640 PF00664 ABC transporter transmembrane region CA604_03645 PF10150 Ribonuclease E/G family CA604_03650 PF01227 GTP cyclohydrolase I CA604_03680 PF00565 Staphylococcal nuclease homologue CA604_03685 PF00881 Nitroreductase family CA604_03690 PF03544 Gram-negative bacterial TonB protein C-terminal CA604_03695 PF01618 CA604_03695 CA604_03700 PF02472 Biopolymer transport protein ExbD/TolR CA604_03705 PF05154 CA604_03705 CA604_03710 PF04305 CA604_03710 CA604_03715 PF00005 ABC transporter CA604_03715 PF06472 CA604_03715 CA604_03720 PF13673 Acetyltransferase (GNAT) domain CA604_03725 PF04247 CA604_03725 CA604_03730 PF01925 CA604_03730 CA604_03735 PF00575 S1 RNA binding domain CA604_03735 PF00773 RNB domain CA604_03735 PF08206 Ribonuclease B OB domain CA604_03740 PF00588 SpoU rRNA Methylase family CA604_03740 PF08032 RNA 2'-O ribose methyltransferase substrate binding CA604_03745 PF01053 Cys/Met metabolism PLP-dependent enzyme CA604_03750 PF00216 Bacterial DNA-binding protein CA604_03755 PF13437 HlyD family secretion protein CA604_03755 PF13533 Biotin-lipoyl like CA604_03760 PF00005 ABC transporter CA604_03760 PF12698 ABC-2 family transporter protein CA604_03765 PF12698 ABC-2 family transporter protein CA604_03770 PF02321 Outer membrane efflux protein CA604_03780 PF00764 Arginosuccinate synthase CA604_03785 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CA604_03785 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CA604_03790 PF12112 Protein of unknown function (DUF3579) CA604_03795 PF01649 Ribosomal protein S20 CA604_03800 PF03023 CA604_03800 CA604_03805 PF00406 Adenylate kinase CA604_03805 PF05191 Adenylate kinase, active site lid CA604_03810 PF02348 Cytidylyltransferase CA604_03815 PF03966 Trm112p-like protein CA604_03820 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CA604_03825 PF02601 CA604_03825 CA604_03825 PF13742 CA604_03825 CA604_03830 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CA604_03830 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CA604_03835 PF13458 Periplasmic binding protein CA604_03840 PF03807 NADP oxidoreductase coenzyme F420-dependent CA604_03840 PF14748 Pyrroline-5-carboxylate reductase dimerisation CA604_03845 PF02653 CA604_03845 CA604_03850 PF02653 CA604_03850 CA604_03850 PF11862 CA604_03850 CA604_03855 PF00005 ABC transporter CA604_03855 PF12399 Branched-chain amino acid ATP-binding cassette transporter CA604_03860 PF00005 ABC transporter CA604_03865 PF02630 SCO1/SenC CA604_03870 PF01432 Peptidase family M3 CA604_03875 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CA604_03875 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CA604_03880 PF00072 Response regulator receiver domain CA604_03880 PF00196 Bacterial regulatory proteins, luxR family CA604_03885 PF00512 His Kinase A (phospho-acceptor) domain CA604_03885 PF00989 PAS fold CA604_03885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA604_03885 PF13188 PAS domain CA604_03890 PF00456 Transketolase, thiamine diphosphate binding domain CA604_03895 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CA604_03895 PF00364 Biotin-requiring enzyme CA604_03895 PF02817 e3 binding domain CA604_03900 PF00364 Biotin-requiring enzyme CA604_03900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CA604_03900 PF07992 Pyridine nucleotide-disulphide oxidoreductase CA604_03905 PF01292 Prokaryotic cytochrome b561 CA604_03910 PF08245 Mur ligase middle domain CA604_03915 PF05036 Sporulation related domain CA604_03920 PF02674 CA604_03920 CA604_03925 PF00156 Phosphoribosyl transferase domain CA604_03925 PF13537 Glutamine amidotransferase domain CA604_03930 PF02423 Ornithine cyclodeaminase/mu-crystallin family CA604_03935 PF02600 Disulfide bond formation protein DsbB CA604_03940 PF01914 CA604_03940 CA604_03945 PF01966 HD domain CA604_03945 PF08335 GlnD PII-uridylyltransferase CA604_03950 PF00557 Metallopeptidase family M24 CA604_03955 PF00318 Ribosomal protein S2 CA604_03960 PF00889 Elongation factor TS CA604_03965 PF00696 Amino acid kinase family CA604_03970 PF01765 Ribosome recycling factor CA604_03975 PF01255 Putative undecaprenyl diphosphate synthase CA604_03980 PF01148 Cytidylyltransferase family CA604_03985 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CA604_03985 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal CA604_03985 PF13288 DXP reductoisomerase C-terminal domain CA604_03990 PF02163 Peptidase family M50 CA604_03990 PF13180 PDZ domain CA604_03995 PF01103 Surface antigen CA604_03995 PF07244 Surface antigen variable number repeat CA604_04000 PF03938 Outer membrane protein (OmpH-like) CA604_04005 PF00132 Bacterial transferase hexapeptide (six repeats) CA604_04005 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CA604_04010 PF07977 FabA-like domain CA604_04015 PF00132 Bacterial transferase hexapeptide (six repeats) CA604_04015 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CA604_04020 PF02684 CA604_04020 CA604_04025 PF01351 Ribonuclease HII CA604_04030 PF00487 CA604_04030 CA604_04035 PF00588 SpoU rRNA Methylase family CA604_04040 PF03618 CA604_04040 CA604_04045 PF00391 PEP-utilising enzyme, mobile domain CA604_04045 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CA604_04045 PF02896 PEP-utilising enzyme, TIM barrel domain CA604_04050 PF01957 NfeD-like C-terminal, partner-binding CA604_04055 PF01145 SPFH domain / Band 7 family CA604_04055 PF16200 CA604_04055 CA604_04060 PF01668 SmpB protein CA604_04065 PF03364 Polyketide cyclase / dehydrase and lipid transport CA604_04070 PF03658 RnfH family Ubiquitin CA604_04080 PF02618 YceG-like family CA604_04085 PF02223 Thymidylate kinase CA604_04090 PF13177 DNA polymerase III, delta subunit CA604_04095 PF01026 TatD related DNase CA604_04100 PF12796 Ankyrin repeats (3 copies) CA604_04105 PF03334 CA604_04105 CA604_04110 PF04066 CA604_04110 CA604_04115 PF01899 CA604_04115 CA604_04120 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CA604_04125 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CA604_04130 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CA604_04130 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CA604_04130 PF04039 CA604_04130 CA604_04130 PF13244 CA604_04130 CA604_04140 PF16576 CA604_04140 CA604_04145 PF00873 AcrB/AcrD/AcrF family CA604_04150 PF02321 Outer membrane efflux protein CA604_04155 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CA604_04160 PF00881 Nitroreductase family CA604_04165 PF00171 Aldehyde dehydrogenase family CA604_04170 PF02321 Outer membrane efflux protein CA604_04175 PF00873 AcrB/AcrD/AcrF family CA604_04180 PF00873 AcrB/AcrD/AcrF family CA604_04185 PF13437 HlyD family secretion protein CA604_04185 PF13533 Biotin-lipoyl like CA604_04190 PF00892 EamA-like transporter family CA604_04200 PF03401 Tripartite tricarboxylate transporter family receptor CA604_04210 PF03372 Endonuclease/Exonuclease/phosphatase family CA604_04220 PF00849 RNA pseudouridylate synthase CA604_04220 PF01479 S4 domain CA604_04225 PF00543 Nitrogen regulatory protein P-II CA604_04230 PF02540 NAD synthase CA604_04235 PF00206 Lyase CA604_04235 PF14698 Argininosuccinate lyase C-terminal CA604_04240 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CA604_04245 PF02631 RecX family CA604_04250 PF00154 recA bacterial DNA recombination protein CA604_04255 PF04381 Putative exonuclease, RdgC CA604_04265 PF00271 Helicase conserved C-terminal domain CA604_04265 PF02151 UvrB/uvrC motif CA604_04265 PF04851 Type III restriction enzyme, res subunit CA604_04265 PF12344 Ultra-violet resistance protein B CA604_04270 PF00155 Aminotransferase class I and II CA604_04275 PF00717 Peptidase S24-like CA604_04275 PF01726 LexA DNA binding domain CA604_04280 PF06808 CA604_04280 CA604_04280 PF11874 CA604_04280 CA604_04285 PF16868 CA604_04285 CA604_04295 PF01594 CA604_04295 CA604_04320 PF00132 Bacterial transferase hexapeptide (six repeats) CA604_04320 PF14602 Hexapeptide repeat of succinyl-transferase CA604_04320 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CA604_04325 PF01546 Peptidase family M20/M25/M40 CA604_04325 PF07687 Peptidase dimerisation domain CA604_04330 PF05175 Methyltransferase small domain CA604_04335 PF00005 ABC transporter CA604_04335 PF12848 ABC transporter CA604_04340 PF00005 ABC transporter CA604_04345 PF02653 CA604_04345 CA604_04350 PF04392 ABC transporter substrate binding protein CA604_04355 PF01416 tRNA pseudouridine synthase CA604_04360 PF01118 Semialdehyde dehydrogenase, NAD binding domain CA604_04360 PF02774 Semialdehyde dehydrogenase, dimerisation domain CA604_04365 PF00180 Isocitrate/isopropylmalate dehydrogenase CA604_04370 PF00694 Aconitase C-terminal domain CA604_04375 PF00330 Aconitase family (aconitate hydratase) CA604_04380 PF09842 CA604_04380 CA604_04385 PF03631 CA604_04385 CA604_04390 PF00111 2Fe-2S iron-sulfur cluster binding domain CA604_04395 PF00268 Ribonucleotide reductase, small chain CA604_04400 PF00317 Ribonucleotide reductase, all-alpha domain CA604_04400 PF02867 Ribonucleotide reductase, barrel domain CA604_04400 PF03477 ATP cone domain CA604_04405 PF01207 Dihydrouridine synthase (Dus) CA604_04410 PF00571 CBS domain CA604_04410 PF00654 Voltage gated chloride channel CA604_04415 PF01636 Phosphotransferase enzyme family CA604_04425 PF00766 Electron transfer flavoprotein FAD-binding domain CA604_04425 PF01012 Electron transfer flavoprotein domain CA604_04430 PF01012 Electron transfer flavoprotein domain CA604_04435 PF01066 CDP-alcohol phosphatidyltransferase CA604_04440 PF01541 GIY-YIG catalytic domain CA604_04440 PF02151 UvrB/uvrC motif CA604_04440 PF08459 UvrC Helix-hairpin-helix N-terminal CA604_04440 PF14520 Helix-hairpin-helix domain CA604_04445 PF00933 Glycosyl hydrolase family 3 N terminal domain CA604_04450 PF01648 4'-phosphopantetheinyl transferase superfamily CA604_04455 PF00929 Exonuclease CA604_04460 PF03193 Protein of unknown function, DUF258 CA604_04465 PF01245 Ribosomal protein L19 CA604_04470 PF02643 Uncharacterized ACR, COG1430 CA604_04475 PF00482 Type II secretion system (T2SS), protein F CA604_04480 PF00482 Type II secretion system (T2SS), protein F CA604_04485 PF00437 Type II/IV secretion system protein CA604_04485 PF00498 FHA domain CA604_04490 PF00263 CA604_04490 CA604_04490 PF13629 CA604_04490 CA604_04495 PF08666 SAF domain CA604_04495 PF16976 CA604_04495 CA604_04510 PF13400 CA604_04510 CA604_04520 PF03167 Uracil DNA glycosylase superfamily CA604_04530 PF00589 Phage integrase family CA604_04530 PF13356 Domain of unknown function (DUF4102) CA604_04530 PF14659 Phage integrase, N-terminal SAM-like domain CA604_04535 PF13481 AAA domain CA604_04540 PF03432 CA604_04540 CA604_04545 PF05713 CA604_04545 CA604_04555 PF05930 Prophage CP4-57 regulatory protein (AlpA) CA604_04565 PF08238 Sel1 repeat CA604_04570 PF00140 Sigma-70 factor, region 1 CA604_04570 PF03979 Sigma-70 factor, region 1 CA604_04570 PF04539 Sigma-70 region 3 CA604_04570 PF04542 Sigma-70 region 2 CA604_04570 PF04545 Sigma-70, region 4 CA604_04570 PF04546 Sigma-70, non-essential region CA604_04575 PF01807 CHC2 zinc finger CA604_04575 PF08275 DNA primase catalytic core, N-terminal domain CA604_04575 PF10410 DnaB-helicase binding domain of primase CA604_04575 PF13155 Toprim-like CA604_04580 PF01165 Ribosomal protein S21 CA604_04585 PF00156 Phosphoribosyl transferase domain CA604_04590 PF00709 Adenylosuccinate synthetase CA604_04595 PF01145 SPFH domain / Band 7 family CA604_04600 PF01145 SPFH domain / Band 7 family CA604_04600 PF12221 CA604_04600 CA604_04605 PF01926 50S ribosome-binding GTPase CA604_04605 PF13167 CA604_04605 CA604_04605 PF16360 CA604_04605 CA604_04610 PF17209 CA604_04610 CA604_04615 PF01926 50S ribosome-binding GTPase CA604_04615 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CA604_04620 PF13360 PQQ-like domain CA604_04625 PF09976 Tetratricopeptide repeat CA604_04630 PF03129 Anticodon binding domain CA604_04630 PF13393 Histidyl-tRNA synthetase CA604_04635 PF04551 GcpE protein CA604_04640 PF13413 Helix-turn-helix domain CA604_04645 PF04055 Radical SAM superfamily CA604_04645 PF13394 4Fe-4S single cluster domain CA604_04650 PF00334 Nucleoside diphosphate kinase CA604_04655 PF00133 tRNA synthetases class I (I, L, M and V) CA604_04655 PF08264 Anticodon-binding domain of tRNA CA604_04655 PF10458 Valyl tRNA synthetase tRNA binding arm CA604_04660 PF17274 CA604_04660 CA604_04665 PF00719 Inorganic pyrophosphatase CA604_04670 PF07219 CA604_04670 CA604_04675 PF04375 CA604_04675 CA604_04680 PF02602 Uroporphyrinogen-III synthase HemD CA604_04685 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CA604_04685 PF03900 Porphobilinogen deaminase, C-terminal domain CA604_04690 PF03741 CA604_04690 CA604_04695 PF00549 CoA-ligase CA604_04695 PF02629 CoA binding domain CA604_04700 PF00549 CoA-ligase CA604_04700 PF08442 ATP-grasp domain CA604_04705 PF11136 CA604_04705 CA604_04710 PF01019 Gamma-glutamyltranspeptidase CA604_04715 PF08713 DNA alkylation repair enzyme CA604_04720 PF05958 tRNA (Uracil-5-)-methyltransferase CA604_04730 PF01476 LysM domain CA604_04730 PF01551 Peptidase family M23 CA604_04735 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CA604_04740 PF01975 Survival protein SurE CA604_04745 PF02660 CA604_04745 CA604_04750 PF00814 Glycoprotease family CA604_04755 PF00860 Permease family CA604_04760 PF01205 Uncharacterized protein family UPF0029 CA604_04765 PF00005 ABC transporter CA604_04765 PF12848 ABC transporter CA604_04770 PF02016 LD-carboxypeptidase CA604_04775 PF14437 CA604_04775 CA604_04780 PF00145 C-5 cytosine-specific DNA methylase CA604_04790 PF00145 C-5 cytosine-specific DNA methylase CA604_04795 PF02678 Pirin CA604_04795 PF05726 Pirin C-terminal cupin domain CA604_04800 PF01047 MarR family CA604_04805 PF00593 TonB dependent receptor CA604_04805 PF07715 TonB-dependent Receptor Plug Domain CA604_04810 PF00842 Alanine racemase, C-terminal domain CA604_04810 PF01168 Alanine racemase, N-terminal domain CA604_04825 PF08238 Sel1 repeat CA604_04835 PF08238 Sel1 repeat CA604_04840 PF03992 Antibiotic biosynthesis monooxygenase CA604_04845 PF02492 CobW/HypB/UreG, nucleotide-binding domain CA604_04845 PF07683 Cobalamin synthesis protein cobW C-terminal domain CA604_04855 PF01522 Polysaccharide deacetylase CA604_04860 PF00005 ABC transporter CA604_04860 PF08402 TOBE domain CA604_04865 PF00528 Binding-protein-dependent transport system inner membrane component CA604_04870 PF13343 Bacterial extracellular solute-binding protein CA604_04890 PF00285 Citrate synthase CA604_04895 PF03937 Flavinator of succinate dehydrogenase CA604_04900 PF13085 2Fe-2S iron-sulfur cluster binding domain CA604_04900 PF13534 4Fe-4S dicluster domain CA604_04905 PF00890 FAD binding domain CA604_04905 PF02910 Fumarate reductase flavoprotein C-term CA604_04910 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CA604_04915 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CA604_04920 PF00056 lactate/malate dehydrogenase, NAD binding domain CA604_04920 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CA604_04925 PF00171 Aldehyde dehydrogenase family CA604_04930 PF01323 DSBA-like thioredoxin domain CA604_04935 PF14542 GCN5-related N-acetyl-transferase CA604_04940 PF15428 CA604_04940 CA604_04945 PF14078 CA604_04945 CA604_04950 PF15428 CA604_04950 CA604_04955 PF03527 CA604_04955 CA604_04955 PF05593 CA604_04955 CA604_04960 PF15571 CA604_04960 CA604_04965 PF03527 CA604_04965 CA604_04965 PF15653 CA604_04965 CA604_04970 PF12796 Ankyrin repeats (3 copies) CA604_04975 PF03527 CA604_04975 CA604_04975 PF05593 CA604_04975 CA604_04975 PF14410 CA604_04975 CA604_04980 PF11042 CA604_04980 CA604_04985 PF03527 CA604_04985 CA604_04985 PF05593 CA604_04985 CA604_04985 PF15545 CA604_04985 CA604_04990 PF14136 CA604_04990 CA604_05000 PF15570 CA604_05000 CA604_05005 PF03527 CA604_05005 CA604_05005 PF05593 CA604_05005 CA604_05005 PF05954 Phage late control gene D protein (GPD) CA604_05005 PF14412 CA604_05005 CA604_05010 PF13599 Pentapeptide repeats (9 copies) CA604_05015 PF09937 CA604_05015 CA604_05015 PF13599 Pentapeptide repeats (9 copies) CA604_05020 PF05954 Phage late control gene D protein (GPD) CA604_05025 PF13665 CA604_05025 CA604_05030 PF05954 Phage late control gene D protein (GPD) CA604_05035 PF12059 CA604_05035 CA604_05040 PF04380 CA604_05040 CA604_05045 PF00004 ATPase family associated with various cellular activities (AAA) CA604_05045 PF02861 Clp amino terminal domain CA604_05045 PF07724 AAA domain (Cdc48 subfamily) CA604_05045 PF10431 C-terminal, D2-small domain, of ClpB protein CA604_05050 PF13470 CA604_05050 CA604_05055 PF04977 Septum formation initiator CA604_05060 PF00113 Enolase, C-terminal TIM barrel domain CA604_05060 PF03952 Enolase, N-terminal domain CA604_05065 PF00793 DAHP synthetase I family CA604_05070 PF00117 Glutamine amidotransferase class-I CA604_05070 PF06418 CTP synthase N-terminus CA604_05080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CA604_05080 PF03466 LysR substrate binding domain CA604_05085 PF01266 FAD dependent oxidoreductase CA604_05090 PF03553 CA604_05090 CA604_05095 PF00171 Aldehyde dehydrogenase family CA604_05100 PF02423 Ornithine cyclodeaminase/mu-crystallin family CA604_05105 PF00375 Sodium:dicarboxylate symporter family CA604_05110 PF00202 Aminotransferase class-III CA604_05115 PF07063 Domain of unknown function (DUF1338) CA604_05120 PF01471 Putative peptidoglycan binding domain CA604_05150 PF04325 Protein of unknown function (DUF465) CA604_05155 PF03544 Gram-negative bacterial TonB protein C-terminal CA604_05160 PF00593 TonB dependent receptor CA604_05165 PF04187 Protein of unknown function, DUF399 CA604_05185 PF00009 Elongation factor Tu GTP binding domain CA604_05185 PF00679 Elongation factor G C-terminus CA604_05185 PF03144 Elongation factor Tu domain 2 CA604_05190 PF01509 TruB family pseudouridylate synthase (N terminal domain) CA604_05190 PF16198 CA604_05190 CA604_05195 PF02033 Ribosome-binding factor A CA604_05200 PF00009 Elongation factor Tu GTP binding domain CA604_05200 PF04760 Translation initiation factor IF-2, N-terminal region CA604_05200 PF08364 CA604_05200 CA604_05200 PF11987 Translation-initiation factor 2 CA604_05205 PF00575 S1 RNA binding domain CA604_05205 PF08529 NusA N-terminal domain CA604_05205 PF13184 NusA-like KH domain CA604_05205 PF14520 Helix-hairpin-helix domain CA604_05210 PF02576 Uncharacterised BCR, YhbC family COG0779 CA604_05210 PF17384 CA604_05210 CA604_05215 PF00849 RNA pseudouridylate synthase CA604_05215 PF01479 S4 domain CA604_05220 PF04079 Putative transcriptional regulators (Ypuh-like) CA604_05230 PF00849 RNA pseudouridylate synthase CA604_05230 PF01479 S4 domain CA604_05235 PF13525 Outer membrane lipoprotein CA604_05240 PF00817 impB/mucB/samB family CA604_05240 PF11799 impB/mucB/samB family C-terminal domain CA604_05240 PF13438 CA604_05240 CA604_05245 PF00717 Peptidase S24-like CA604_05250 PF00580 UvrD/REP helicase N-terminal domain CA604_05250 PF13361 UvrD-like helicase C-terminal domain CA604_05255 PF01189 NOL1/NOP2/sun family CA604_05260 PF00551 Formyl transferase CA604_05265 PF01687 Riboflavin kinase CA604_05265 PF06574 FAD synthetase CA604_05270 PF00133 tRNA synthetases class I (I, L, M and V) CA604_05270 PF06827 Zinc finger found in FPG and IleRS CA604_05270 PF08264 Anticodon-binding domain of tRNA CA604_05275 PF01252 CA604_05275 CA604_05280 PF02441 Flavoprotein CA604_05280 PF04127 DNA / pantothenate metabolism flavoprotein CA604_05285 PF09335 CA604_05285 CA604_05290 PF00692 dUTPase CA604_05295 PF00593 TonB dependent receptor CA604_05295 PF07715 TonB-dependent Receptor Plug Domain CA604_05300 PF01298 Transferrin binding protein-like solute binding protein CA604_05300 PF17483 CA604_05300 CA604_05300 PF17484 CA604_05300 CA604_05305 PF13458 Periplasmic binding protein CA604_05310 PF00004 ATPase family associated with various cellular activities (AAA) CA604_05310 PF07724 AAA domain (Cdc48 subfamily) CA604_05310 PF10431 C-terminal, D2-small domain, of ClpB protein CA604_05315 PF00313 'Cold-shock' DNA-binding domain CA604_05320 PF02643 Uncharacterized ACR, COG1430 CA604_05325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CA604_05325 PF03466 LysR substrate binding domain CA604_05335 PF13343 Bacterial extracellular solute-binding protein CA604_05340 PF00528 Binding-protein-dependent transport system inner membrane component CA604_05345 PF00005 ABC transporter CA604_05360 PF00120 Glutamine synthetase, catalytic domain CA604_05360 PF03951 Glutamine synthetase, beta-Grasp domain CA604_05365 PF04055 Radical SAM superfamily CA604_05365 PF06969 HemN C-terminal domain CA604_05370 PF01725 Ham1 family CA604_05375 PF01138 3' exoribonuclease family, domain 1 CA604_05375 PF03725 3' exoribonuclease family, domain 2 CA604_05380 PF03755 CA604_05380 CA604_05380 PF08340 CA604_05380 CA604_05385 PF00772 DnaB-like helicase N terminal domain CA604_05385 PF03796 DnaB-like helicase C terminal domain CA604_05390 PF01281 Ribosomal protein L9, N-terminal domain CA604_05390 PF03948 Ribosomal protein L9, C-terminal domain CA604_05395 PF01084 Ribosomal protein S18 CA604_05405 PF01250 Ribosomal protein S6 CA604_05410 PF02649 Type I GTP cyclohydrolase folE2 CA604_05415 PF02779 Transketolase, pyrimidine binding domain CA604_05415 PF02780 Transketolase, C-terminal domain CA604_05415 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CA604_05420 PF00348 Polyprenyl synthetase CA604_05425 PF02609 Exonuclease VII small subunit CA604_05430 PF00355 Rieske [2Fe-2S] domain CA604_05430 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CA604_05435 PF01979 Amidohydrolase family CA604_05440 PF00221 Aromatic amino acid lyase CA604_05445 PF01175 Urocanase CA604_05445 PF17391 CA604_05445 CA604_05445 PF17392 CA604_05445 CA604_05450 PF00392 Bacterial regulatory proteins, gntR family CA604_05450 PF07702 UTRA domain CA604_05455 PF00581 Rhodanese-like domain CA604_05460 PF00892 EamA-like transporter family CA604_05465 PF01435 Peptidase family M48 CA604_05470 PF00476 DNA polymerase family A CA604_05470 PF01367 5'-3' exonuclease, C-terminal SAM fold CA604_05470 PF01612 3'-5' exonuclease CA604_05470 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CA604_05475 PF03641 Possible lysine decarboxylase CA604_05480 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CA604_05480 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CA604_05490 PF00391 PEP-utilising enzyme, mobile domain CA604_05490 PF02896 PEP-utilising enzyme, TIM barrel domain CA604_05490 PF05524 PEP-utilising enzyme, N-terminal CA604_05495 PF00381 PTS HPr component phosphorylation site CA604_05500 PF03610 PTS system fructose IIA component CA604_05505 PF00707 Translation initiation factor IF-3, C-terminal domain CA604_05505 PF05198 Translation initiation factor IF-3, N-terminal domain CA604_05510 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CA604_05510 PF02824 TGS domain CA604_05510 PF03129 Anticodon binding domain CA604_05510 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CA604_05520 PF00004 ATPase family associated with various cellular activities (AAA) CA604_05520 PF02190 ATP-dependent protease La (LON) domain CA604_05520 PF05362 Lon protease (S16) C-terminal proteolytic domain CA604_05525 PF06689 ClpX C4-type zinc finger CA604_05525 PF07724 AAA domain (Cdc48 subfamily) CA604_05525 PF10431 C-terminal, D2-small domain, of ClpB protein CA604_05530 PF00574 Clp protease CA604_05535 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CA604_05535 PF05697 Bacterial trigger factor protein (TF) CA604_05535 PF05698 Bacterial trigger factor protein (TF) C-terminus CA604_05545 PF03710 Glutamate-ammonia ligase adenylyltransferase CA604_05545 PF08335 GlnD PII-uridylyltransferase CA604_05550 PF02677 CA604_05550 CA604_05560 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CA604_05565 PF07424 CA604_05565 CA604_05575 PF01464 Transglycosylase SLT domain CA604_05585 PF05101 CA604_05585 CA604_05590 PF03135 CA604_05590 CA604_05605 PF01816 Leucine rich repeat variant CA604_05655 PF07996 Type IV secretion system proteins CA604_05660 PF04610 CA604_05660 CA604_05680 PF08401 CA604_05680 CA604_05685 PF10098 CA604_05685 CA604_05695 PF04335 VirB8 protein CA604_05700 PF03524 Conjugal transfer protein CA604_05705 PF03743 Bacterial conjugation TrbI-like protein CA604_05710 PF01816 Leucine rich repeat variant CA604_05725 PF00437 Type II/IV secretion system protein CA604_05730 PF02534 Type IV secretory system Conjugative DNA transfer CA604_05755 PF08707 CA604_05755 CA604_05755 PF13362 Toprim domain CA604_05765 PF05713 CA604_05765 CA604_05770 PF03432 CA604_05770 CA604_05795 PF08843 Nucleotidyl transferase of unknown function (DUF1814) CA604_05805 PF12844 Helix-turn-helix domain CA604_05810 PF13958 Toxin ToxN, type III toxin-antitoxin system CA604_05815 PF04796 CA604_05815 CA604_05820 PF01381 Helix-turn-helix CA604_05825 PF12728 Helix-turn-helix domain CA604_05830 PF00589 Phage integrase family CA604_05830 PF13356 Domain of unknown function (DUF4102) CA604_05830 PF14659 Phage integrase, N-terminal SAM-like domain CA604_05845 PF13328 HD domain CA604_05855 PF00701 Dihydrodipicolinate synthetase family CA604_05860 PF06804 NlpB/DapX lipoprotein CA604_05870 PF07520 CA604_05870 CA604_05875 PF10139 CA604_05875 CA604_05890 PF00005 ABC transporter CA604_05900 PF03781 Sulfatase-modifying factor enzyme 1 CA604_05915 PF13519 von Willebrand factor type A domain CA604_05920 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CA604_05920 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CA604_05925 PF00593 TonB dependent receptor CA604_05925 PF07715 TonB-dependent Receptor Plug Domain CA604_05930 PF00013 KH domain CA604_05930 PF00575 S1 RNA binding domain CA604_05930 PF01138 3' exoribonuclease family, domain 1 CA604_05930 PF03725 3' exoribonuclease family, domain 2 CA604_05930 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CA604_05935 PF00312 Ribosomal protein S15 CA604_05945 PF01235 CA604_05945 CA604_05950 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CA604_05950 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain CA604_05955 PF10369 Small subunit of acetolactate synthase CA604_05955 PF13710 ACT domain CA604_05960 PF00205 Thiamine pyrophosphate enzyme, central domain CA604_05960 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CA604_05960 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CA604_05965 PF03883 CA604_05965 CA604_05970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CA604_05970 PF02403 Seryl-tRNA synthetase N-terminal domain CA604_05975 PF05496 Holliday junction DNA helicase ruvB N-terminus CA604_05975 PF12002 MgsA AAA+ ATPase C terminal CA604_05975 PF16193 CA604_05975 CA604_05980 PF03548 Outer membrane lipoprotein carrier protein LolA CA604_05985 PF01580 FtsK/SpoIIIE family CA604_05985 PF09397 Ftsk gamma domain CA604_05985 PF13491 CA604_05985 CA604_05990 PF07992 Pyridine nucleotide-disulphide oxidoreductase CA604_05995 PF01713 Smr domain CA604_06000 PF04284 CA604_06000 CA604_06005 PF08897 CA604_06005 CA604_06010 PF03601 CA604_06010 CA604_06020 PF03797 Autotransporter beta-domain CA604_06020 PF13018 CA604_06020 CA604_06025 PF00226 DnaJ domain CA604_06025 PF00684 DnaJ central domain CA604_06025 PF01556 DnaJ C terminal domain CA604_06030 PF00012 Hsp70 protein CA604_06035 PF01025 GrpE CA604_06040 PF00132 Bacterial transferase hexapeptide (six repeats) CA604_06045 PF00762 Ferrochelatase CA604_06050 PF01628 HrcA protein C terminal domain CA604_06050 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CA604_06055 PF01513 ATP-NAD kinase CA604_06060 PF02463 RecF/RecN/SMC N terminal domain CA604_06065 PF01113 Dihydrodipicolinate reductase, N-terminus CA604_06065 PF05173 Dihydrodipicolinate reductase, C-terminus CA604_06070 PF04355 SmpA / OmlA family CA604_06075 PF01475 Ferric uptake regulator family CA604_06080 PF01565 FAD binding domain CA604_06080 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CA604_06090 PF01545 Cation efflux family CA604_06100 PF00145 C-5 cytosine-specific DNA methylase CA604_06105 PF04261 Dyp-type peroxidase family CA604_06115 PF00005 ABC transporter CA604_06120 PF00528 Binding-protein-dependent transport system inner membrane component CA604_06125 PF00528 Binding-protein-dependent transport system inner membrane component CA604_06130 PF12849 PBP superfamily domain CA604_06135 PF02541 Ppx/GppA phosphatase family CA604_06140 PF13444 Acetyltransferase (GNAT) domain CA604_06145 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CA604_06145 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CA604_06145 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CA604_06145 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CA604_06150 PF00809 Pterin binding enzyme CA604_06155 PF00004 ATPase family associated with various cellular activities (AAA) CA604_06155 PF01434 Peptidase family M41 CA604_06155 PF06480 FtsH Extracellular CA604_06160 PF01728 FtsJ-like methyltransferase CA604_06165 PF01985 CRS1 / YhbY (CRM) domain CA604_06170 PF01272 Transcription elongation factor, GreA/GreB, C-term CA604_06170 PF03449 Transcription elongation factor, N-terminal CA604_06175 PF00860 Permease family CA604_06180 PF00210 Ferritin-like domain CA604_06185 PF02142 MGS-like domain CA604_06185 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CA604_06185 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CA604_06190 PF00117 Glutamine amidotransferase class-I CA604_06190 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CA604_06195 PF02132 RecR protein CA604_06195 PF13662 Toprim domain CA604_06200 PF02575 YbaB/EbfC DNA-binding family CA604_06205 PF12170 DNA polymerase III tau subunit V interacting with alpha CA604_06210 PF12169 DNA polymerase III subunits gamma and tau domain III CA604_06210 PF13177 DNA polymerase III, delta subunit CA604_06220 PF00580 UvrD/REP helicase N-terminal domain CA604_06220 PF13361 UvrD-like helicase C-terminal domain CA604_06225 PF12705 PD-(D/E)XK nuclease superfamily CA604_06235 PF04932 CA604_06235 CA604_06240 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CA604_06245 PF02661 Fic/DOC family CA604_06250 PF08843 Nucleotidyl transferase of unknown function (DUF1814) CA604_06275 PF00589 Phage integrase family CA604_06275 PF02899 Phage integrase, N-terminal SAM-like domain CA604_06280 PF02367 Uncharacterised P-loop hydrolase UPF0079 CA604_06285 PF01520 N-acetylmuramoyl-L-alanine amidase CA604_06285 PF11741 AMIN domain CA604_06290 PF01119 DNA mismatch repair protein, C-terminal domain CA604_06290 PF08676 MutL C terminal dimerisation domain CA604_06290 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA604_06295 PF01715 IPP transferase CA604_06300 PF00586 AIR synthase related protein, N-terminal domain CA604_06300 PF02769 AIR synthase related protein, C-terminal domain CA604_06305 PF00308 Bacterial dnaA protein CA604_06310 PF01743 Poly A polymerase head domain CA604_06310 PF12626 Polymerase A arginine-rich C-terminus CA604_06310 PF12627 Probable RNA and SrmB- binding site of polymerase A CA604_06315 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CA604_06320 PF00483 Nucleotidyl transferase CA604_06325 PF00342 Phosphoglucose isomerase CA604_06330 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CA604_06335 PF00034 Cytochrome c CA604_06365 PF00293 NUDIX domain CA604_06365 PF14803 Nudix N-terminal CA604_06370 PF01180 Dihydroorotate dehydrogenase CA604_06375 PF00085 Thioredoxin CA604_06380 PF00270 DEAD/DEAH box helicase CA604_06380 PF00271 Helicase conserved C-terminal domain CA604_06385 PF09678 CA604_06385 CA604_06390 PF01207 Dihydrouridine synthase (Dus) CA604_06395 PF02954 Bacterial regulatory protein, Fis family CA604_06400 PF01808 AICARFT/IMPCHase bienzyme CA604_06400 PF02142 MGS-like domain CA604_06405 PF02075 Crossover junction endodeoxyribonuclease RuvC CA604_06410 PF01330 RuvA N terminal domain CA604_06410 PF07499 RuvA, C-terminal domain CA604_06410 PF14520 Helix-hairpin-helix domain CA604_06415 PF04290 CA604_06415 CA604_06420 PF06808 CA604_06420 CA604_06425 PF05491 Holliday junction DNA helicase ruvB C-terminus CA604_06425 PF05496 Holliday junction DNA helicase ruvB N-terminus CA604_06430 PF01266 FAD dependent oxidoreductase CA604_06435 PF02597 ThiS family CA604_06440 PF05690 Thiazole biosynthesis protein ThiG CA604_06470 PF01522 Polysaccharide deacetylase CA604_06475 PF01055 Glycosyl hydrolases family 31 CA604_06480 PF01266 FAD dependent oxidoreductase CA604_06485 PF00571 CBS domain CA604_06485 PF01769 Divalent cation transporter CA604_06485 PF03448 MgtE intracellular N domain CA604_06490 PF01043 SecA preprotein cross-linking domain CA604_06490 PF02810 SEC-C motif CA604_06490 PF07516 SecA Wing and Scaffold domain CA604_06490 PF07517 SecA DEAD-like domain CA604_06495 PF01551 Peptidase family M23 CA604_06500 PF05258 CA604_06500 CA604_06505 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CA604_06510 PF00091 Tubulin/FtsZ family, GTPase domain CA604_06510 PF12327 FtsZ family, C-terminal domain CA604_06515 PF02491 SHS2 domain inserted in FTSA CA604_06515 PF14450 Cell division protein FtsA CA604_06520 PF03799 Cell division protein FtsQ CA604_06520 PF08478 POTRA domain, FtsQ-type CA604_06525 PF01820 D-ala D-ala ligase N-terminus CA604_06525 PF07478 D-ala D-ala ligase C-terminus CA604_06530 PF01225 Mur ligase family, catalytic domain CA604_06530 PF02875 Mur ligase family, glutamate ligase domain CA604_06530 PF08245 Mur ligase middle domain CA604_06535 PF03033 Glycosyltransferase family 28 N-terminal domain CA604_06535 PF04101 Glycosyltransferase family 28 C-terminal domain CA604_06540 PF01098 CA604_06540 CA604_06545 PF02875 Mur ligase family, glutamate ligase domain CA604_06545 PF08245 Mur ligase middle domain CA604_06550 PF00953 Glycosyl transferase family 4 CA604_06550 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CA604_06555 PF01225 Mur ligase family, catalytic domain CA604_06555 PF02875 Mur ligase family, glutamate ligase domain CA604_06555 PF08245 Mur ligase middle domain CA604_06560 PF00905 Penicillin binding protein transpeptidase domain CA604_06560 PF03717 Penicillin-binding Protein dimerisation domain CA604_06565 PF04999 CA604_06565 CA604_06570 PF01795 MraW methylase family CA604_06575 PF02381 MraZ protein CA604_06585 PF00199 Catalase CA604_06585 PF06628 Catalase-related immune-responsive CA604_06590 PF02091 Glycyl-tRNA synthetase alpha subunit CA604_06595 PF02092 CA604_06595 CA604_06595 PF05746 DALR anticodon binding domain CA604_06600 PF08645 Polynucleotide kinase 3 phosphatase CA604_06605 PF01553 Acyltransferase CA604_06610 PF01863 Protein of unknown function DUF45 CA604_06615 PF00398 Ribosomal RNA adenine dimethylase CA604_06620 PF00639 PPIC-type PPIASE domain CA604_06620 PF09312 SurA N-terminal domain CA604_06620 PF13616 PPIC-type PPIASE domain CA604_06625 PF04453 Organic solvent tolerance protein CA604_06630 PF01636 Phosphotransferase enzyme family CA604_06635 PF00483 Nucleotidyl transferase CA604_06645 PF00072 Response regulator receiver domain CA604_06645 PF00486 Transcriptional regulatory protein, C terminal CA604_06650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA604_06655 PF00749 tRNA synthetases class I (E and Q), catalytic domain CA604_06655 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CA604_06660 PF03775 Septum formation inhibitor MinC, C-terminal domain CA604_06660 PF05209 Septum formation inhibitor MinC, N-terminal domain CA604_06665 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CA604_06670 PF03776 Septum formation topological specificity factor MinE CA604_06675 PF10908 CA604_06675 CA604_06680 PF00005 ABC transporter CA604_06680 PF12848 ABC transporter CA604_06690 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CA604_06695 PF00005 ABC transporter CA604_06700 PF00899 ThiF family CA604_06705 PF01243 Pyridoxamine 5'-phosphate oxidase CA604_06705 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CA604_06710 PF00034 Cytochrome c CA604_06710 PF03150 Di-haem cytochrome c peroxidase CA604_06715 PF01300 Telomere recombination CA604_06715 PF03481 Putative GTP-binding controlling metal-binding CA604_06720 PF02222 ATP-grasp domain CA604_06725 PF00731 AIR carboxylase CA604_06730 PF01259 SAICAR synthetase CA604_06735 PF01116 Fructose-bisphosphate aldolase class-II CA604_06740 PF00795 Carbon-nitrogen hydrolase CA604_06745 PF00162 Phosphoglycerate kinase CA604_06750 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CA604_06750 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CA604_06755 PF00456 Transketolase, thiamine diphosphate binding domain CA604_06755 PF02779 Transketolase, pyrimidine binding domain CA604_06755 PF02780 Transketolase, C-terminal domain CA604_06760 PF04452 RNA methyltransferase CA604_06765 PF01337 Barstar (barnase inhibitor) CA604_06775 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CA604_06785 PF07332 CA604_06785 CA604_06790 PF05957 CA604_06790 CA604_06795 PF14681 Uracil phosphoribosyltransferase CA604_06800 PF02547 Queuosine biosynthesis protein CA604_06805 PF01702 Queuine tRNA-ribosyltransferase CA604_06810 PF02699 Preprotein translocase subunit CA604_06815 PF02355 Protein export membrane protein CA604_06815 PF07549 SecD/SecF GG Motif CA604_06815 PF13721 SecD export protein N-terminal TM region CA604_06820 PF02355 Protein export membrane protein CA604_06820 PF07549 SecD/SecF GG Motif CA604_06825 PF00919 Uncharacterized protein family UPF0004 CA604_06825 PF01938 TRAM domain CA604_06825 PF04055 Radical SAM superfamily CA604_06830 PF02562 PhoH-like protein CA604_06835 PF02130 Uncharacterized protein family UPF0054 CA604_06840 PF00571 CBS domain CA604_06840 PF03471 Transporter associated domain CA604_06845 PF00795 Carbon-nitrogen hydrolase CA604_06860 PF03895 YadA-like C-terminal region CA604_06865 PF00005 ABC transporter CA604_06865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CA604_06870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CA604_06875 PF00528 Binding-protein-dependent transport system inner membrane component CA604_06880 PF00528 Binding-protein-dependent transport system inner membrane component CA604_06880 PF12911 CA604_06880 CA604_06885 PF03576 Peptidase family S58 CA604_06890 PF04951 D-aminopeptidase CA604_06895 PF01112 Asparaginase CA604_06900 PF00075 RNase H CA604_06910 PF00753 Metallo-beta-lactamase superfamily CA604_06910 PF16123 CA604_06910 CA604_06915 PF01464 Transglycosylase SLT domain CA604_06915 PF01476 LysM domain CA604_06920 PF00691 OmpA family CA604_06920 PF06078 Bacterial protein of unknown function (DUF937) CA604_06930 PF00677 Lumazine binding domain CA604_06935 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CA604_06935 PF01872 RibD C-terminal domain CA604_06940 PF03477 ATP cone domain CA604_06945 PF00464 Serine hydroxymethyltransferase CA604_06950 PF00579 tRNA synthetases class I (W and Y) CA604_06950 PF01479 S4 domain CA604_06955 PF03702 Uncharacterised protein family (UPF0075) CA604_06960 PF01521 Iron-sulphur cluster biosynthesis CA604_06970 PF00380 Ribosomal protein S9/S16 CA604_06975 PF00572 Ribosomal protein L13 CA604_06980 PF01523 Putative modulator of DNA gyrase CA604_06985 PF04751 Protein of unknown function (DUF615) CA604_06990 PF02230 Phospholipase/Carboxylesterase CA604_06995 PF00749 tRNA synthetases class I (E and Q), catalytic domain CA604_07005 PF02325 CA604_07005 CA604_07010 PF00294 pfkB family carbohydrate kinase CA604_07015 PF11906 CA604_07015 CA604_07015 PF13719 CA604_07015 CA604_07020 PF06325 Ribosomal protein L11 methyltransferase (PrmA) CA604_07025 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CA604_07025 PF02785 Biotin carboxylase C-terminal domain CA604_07025 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CA604_07030 PF00364 Biotin-requiring enzyme CA604_07035 PF01225 Mur ligase family, catalytic domain CA604_07035 PF02875 Mur ligase family, glutamate ligase domain CA604_07035 PF08245 Mur ligase middle domain CA604_07040 PF00773 RNB domain CA604_07045 PF03739 CA604_07045 CA604_07050 PF00149 Calcineurin-like phosphoesterase CA604_07055 PF01553 Acyltransferase CA604_07060 PF01979 Amidohydrolase family CA604_07065 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CA604_07065 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CA604_07070 PF03652 Uncharacterised protein family (UPF0081) CA604_07075 PF02622 Uncharacterized ACR, COG1678 CA604_07080 PF00301 Rubredoxin CA604_07085 PF02581 Thiamine monophosphate synthase/TENI CA604_07090 PF00202 Aminotransferase class-III CA604_07095 PF00270 DEAD/DEAH box helicase CA604_07095 PF00271 Helicase conserved C-terminal domain CA604_07100 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase CA604_07105 PF01743 Poly A polymerase head domain CA604_07105 PF12627 Probable RNA and SrmB- binding site of polymerase A CA604_07110 PF01812 5-formyltetrahydrofolate cyclo-ligase family CA604_07120 PF05593 CA604_07120 CA604_07130 PF03527 CA604_07130 CA604_07130 PF14414 CA604_07130 CA604_07140 PF03527 CA604_07140 CA604_07140 PF05593 CA604_07140 CA604_07150 PF03527 CA604_07150 CA604_07150 PF05593 CA604_07150 CA604_07150 PF05954 Phage late control gene D protein (GPD) CA604_07150 PF14427 CA604_07150 CA604_07160 PF04328 CA604_07160 CA604_07165 PF02554 CA604_07165 CA604_07165 PF13722 CA604_07165 CA604_07175 PF00890 FAD binding domain CA604_07180 PF05145 CA604_07180 CA604_07185 PF01970 CA604_07185 CA604_07190 PF07331 CA604_07190 CA604_07195 PF03401 Tripartite tricarboxylate transporter family receptor CA604_07200 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CA604_07200 PF05221 S-adenosyl-L-homocysteine hydrolase CA604_07205 PF00438 S-adenosylmethionine synthetase, N-terminal domain CA604_07205 PF02772 S-adenosylmethionine synthetase, central domain CA604_07205 PF02773 S-adenosylmethionine synthetase, C-terminal domain CA604_07210 PF03279 CA604_07210 CA604_07215 PF00156 Phosphoribosyl transferase domain CA604_07220 PF03372 Endonuclease/Exonuclease/phosphatase family CA604_07230 PF07690 Major Facilitator Superfamily CA604_07235 PF00561 alpha/beta hydrolase fold CA604_07235 PF07021 Methionine biosynthesis protein MetW CA604_07240 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CA604_07250 PF00375 Sodium:dicarboxylate symporter family CA604_07255 PF01276 Orn/Lys/Arg decarboxylase, major domain CA604_07255 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CA604_07255 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CA604_07260 PF02687 CA604_07260 CA604_07260 PF12704 MacB-like periplasmic core domain CA604_07265 PF00005 ABC transporter CA604_07275 PF00245 Alkaline phosphatase CA604_07280 PF00072 Response regulator receiver domain CA604_07280 PF00196 Bacterial regulatory proteins, luxR family CA604_07285 PF00512 His Kinase A (phospho-acceptor) domain CA604_07285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA604_07285 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein CA604_07290 PF00034 Cytochrome c CA604_07290 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CA604_07295 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CA604_07300 PF00034 Cytochrome c CA604_07300 PF03150 Di-haem cytochrome c peroxidase CA604_07305 PF04116 CA604_07305 CA604_07310 PF09375 Imelysin CA604_07315 PF06537 CA604_07315 CA604_07320 PF09375 Imelysin CA604_07330 PF13449 Esterase-like activity of phytase CA604_07350 PF05656 CA604_07350 CA604_07355 PF04386 Stringent starvation protein B CA604_07360 PF00043 Glutathione S-transferase, C-terminal domain CA604_07360 PF13417 Glutathione S-transferase, N-terminal domain CA604_07365 PF02167 Cytochrome C1 family CA604_07370 PF00032 Cytochrome b(C-terminal)/b6/petD CA604_07370 PF00033 Cytochrome b(N-terminal)/b6/petB CA604_07375 PF00355 Rieske [2Fe-2S] domain CA604_07380 PF01741 Large-conductance mechanosensitive channel, MscL CA604_07385 PF01784 NIF3 (NGG1p interacting factor 3) CA604_07390 PF13180 PDZ domain CA604_07390 PF13365 Trypsin-like peptidase domain CA604_07395 PF00902 Sec-independent protein translocase protein (TatC) CA604_07400 PF02416 mttA/Hcf106 family CA604_07405 PF02416 mttA/Hcf106 family CA604_07410 PF00977 Histidine biosynthesis protein CA604_07415 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CA604_07420 PF01722 BolA-like protein CA604_07425 PF01061 CA604_07425 CA604_07430 PF00005 ABC transporter CA604_07435 PF05494 Toluene tolerance, Ttg2 CA604_07440 PF04333 CA604_07440 CA604_07445 PF02470 CA604_07445 CA604_07450 PF02405 CA604_07450 CA604_07455 PF00005 ABC transporter CA604_07460 PF02481 DNA recombination-mediator protein A CA604_07465 PF01327 Polypeptide deformylase CA604_07470 PF01168 Alanine racemase, N-terminal domain CA604_07475 PF00571 CBS domain CA604_07475 PF01595 CA604_07475 CA604_07475 PF03471 Transporter associated domain CA604_07480 PF01380 SIS domain CA604_07480 PF13522 Glutamine amidotransferase domain CA604_07485 PF00578 AhpC/TSA family CA604_07485 PF01625 Peptide methionine sulfoxide reductase CA604_07485 PF01641 SelR domain CA604_07495 PF00436 Single-strand binding protein family CA604_07500 PF00436 Single-strand binding protein family CA604_07505 PF07690 Major Facilitator Superfamily CA604_07510 PF00005 ABC transporter CA604_07515 PF00593 TonB dependent receptor CA604_07515 PF07715 TonB-dependent Receptor Plug Domain CA604_07520 PF01966 HD domain CA604_07520 PF13286 Phosphohydrolase-associated domain CA604_07525 PF00905 Penicillin binding protein transpeptidase domain CA604_07525 PF00912 Transglycosylase CA604_07525 PF17092 CA604_07525 CA604_07530 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CA604_07530 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CA604_07540 PF01491 Frataxin-like domain CA604_07545 PF01578 CA604_07545 CA604_07550 PF05140 CA604_07550 CA604_07555 PF00034 Cytochrome c CA604_07560 PF01926 50S ribosome-binding GTPase CA604_07565 PF06092 CA604_07565 CA604_07570 PF00490 Delta-aminolevulinic acid dehydratase CA604_07575 PF02683 CA604_07575 CA604_07575 PF11412 Disulphide bond corrector protein DsbC CA604_07575 PF13098 Thioredoxin-like domain CA604_07580 PF10011 Predicted membrane protein (DUF2254) CA604_07585 PF03616 CA604_07585 CA604_07590 PF00491 Arginase family CA604_07595 PF16695 CA604_07595 CA604_07605 PF01196 Ribosomal protein L17 CA604_07610 PF01000 RNA polymerase Rpb3/RpoA insert domain CA604_07610 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CA604_07610 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CA604_07615 PF00163 Ribosomal protein S4/S9 N-terminal domain CA604_07615 PF01479 S4 domain CA604_07620 PF00411 Ribosomal protein S11 CA604_07625 PF00416 Ribosomal protein S13/S18 CA604_07630 PF00444 Ribosomal protein L36 CA604_07635 PF01176 Translation initiation factor 1A / IF-1 CA604_07640 PF00344 SecY translocase CA604_07645 PF00828 Ribosomal protein L18e/L15 CA604_07650 PF00327 Ribosomal protein L30p/L7e CA604_07655 PF00333 Ribosomal protein S5, N-terminal domain CA604_07655 PF03719 Ribosomal protein S5, C-terminal domain CA604_07660 PF00861 Ribosomal L18p/L5e family CA604_07665 PF00347 Ribosomal protein L6 CA604_07670 PF00410 Ribosomal protein S8 CA604_07675 PF00253 Ribosomal protein S14p/S29e CA604_07680 PF00281 Ribosomal protein L5 CA604_07680 PF00673 ribosomal L5P family C-terminus CA604_07685 PF00467 KOW motif CA604_07685 PF17136 CA604_07685 CA604_07690 PF00238 Ribosomal protein L14p/L23e CA604_07695 PF03553 CA604_07695 CA604_07695 PF13726 CA604_07695 CA604_07700 PF03553 CA604_07700 CA604_07700 PF13726 CA604_07700 CA604_07705 PF00394 Multicopper oxidase CA604_07705 PF07732 Multicopper oxidase CA604_07710 PF00578 AhpC/TSA family CA604_07710 PF02630 SCO1/SenC CA604_07720 PF00122 E1-E2 ATPase CA604_07720 PF00403 Heavy-metal-associated domain CA604_07720 PF00702 haloacid dehalogenase-like hydrolase CA604_07725 PF07331 CA604_07725 CA604_07730 PF01970 CA604_07730 CA604_07740 PF02798 Glutathione S-transferase, N-terminal domain CA604_07740 PF14497 Glutathione S-transferase, C-terminal domain CA604_07745 PF13173 AAA domain CA604_07755 PF01565 FAD binding domain CA604_07755 PF02913 FAD linked oxidases, C-terminal domain CA604_07760 PF03895 YadA-like C-terminal region CA604_07760 PF05662 Coiled stalk of trimeric autotransporter adhesin CA604_07760 PF13018 CA604_07760 CA604_07765 PF03895 YadA-like C-terminal region CA604_07765 PF05658 Head domain of trimeric autotransporter adhesin CA604_07765 PF05662 Coiled stalk of trimeric autotransporter adhesin CA604_07765 PF13018 CA604_07765 CA604_07770 PF03895 YadA-like C-terminal region CA604_07770 PF05658 Head domain of trimeric autotransporter adhesin CA604_07770 PF05662 Coiled stalk of trimeric autotransporter adhesin CA604_07770 PF13018 CA604_07770 CA604_07775 PF03895 YadA-like C-terminal region CA604_07775 PF05658 Head domain of trimeric autotransporter adhesin CA604_07775 PF05662 Coiled stalk of trimeric autotransporter adhesin CA604_07775 PF13018 CA604_07775 CA604_07780 PF00366 Ribosomal protein S17 CA604_07785 PF00831 Ribosomal L29 protein CA604_07790 PF00252 Ribosomal protein L16p/L10e CA604_07795 PF00189 Ribosomal protein S3, C-terminal domain CA604_07795 PF07650 KH domain CA604_07800 PF00237 Ribosomal protein L22p/L17e CA604_07805 PF00203 Ribosomal protein S19 CA604_07810 PF00181 Ribosomal Proteins L2, RNA binding domain CA604_07810 PF03947 Ribosomal Proteins L2, C-terminal domain CA604_07815 PF00276 Ribosomal protein L23 CA604_07820 PF00573 Ribosomal protein L4/L1 family CA604_07825 PF00297 Ribosomal protein L3 CA604_07830 PF02646 CA604_07830 CA604_07835 PF03180 NLPA lipoprotein CA604_07840 PF00528 Binding-protein-dependent transport system inner membrane component CA604_07845 PF00005 ABC transporter CA604_07845 PF09383 NIL domain CA604_07865 PF00338 Ribosomal protein S10p/S20e CA604_07870 PF00005 ABC transporter CA604_07870 PF00664 ABC transporter transmembrane region CA604_07875 PF04221 RelB antitoxin CA604_07880 PF00009 Elongation factor Tu GTP binding domain CA604_07880 PF03143 Elongation factor Tu C-terminal domain CA604_07880 PF03144 Elongation factor Tu domain 2 CA604_07885 PF00009 Elongation factor Tu GTP binding domain CA604_07885 PF00679 Elongation factor G C-terminus CA604_07885 PF03144 Elongation factor Tu domain 2 CA604_07885 PF03764 Elongation factor G, domain IV CA604_07885 PF14492 Elongation Factor G, domain II CA604_07890 PF00177 Ribosomal protein S7p/S5e CA604_07895 PF00164 Ribosomal protein S12/S23 CA604_07915 PF03328 HpcH/HpaI aldolase/citrate lyase family CA604_07920 PF02515 CoA-transferase family III CA604_07925 PF13452 N-terminal half of MaoC dehydratase CA604_07930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CA604_07930 PF02770 Acyl-CoA dehydrogenase, middle domain CA604_07930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CA604_07940 PF15515 MvaI/BcnI restriction endonuclease family CA604_07945 PF12844 Helix-turn-helix domain CA604_07950 PF01555 DNA methylase CA604_07955 PF06945 CA604_07955 CA604_07960 PF00696 Amino acid kinase family CA604_07965 PF00202 Aminotransferase class-III CA604_07970 PF01118 Semialdehyde dehydrogenase, NAD binding domain CA604_07975 PF00583 Acetyltransferase (GNAT) family CA604_07980 PF05232 CA604_07980 CA604_07985 PF00491 Arginase family CA604_07990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CA604_07990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CA604_07995 PF00623 RNA polymerase Rpb1, domain 2 CA604_07995 PF04983 RNA polymerase Rpb1, domain 3 CA604_07995 PF04997 RNA polymerase Rpb1, domain 1 CA604_07995 PF04998 RNA polymerase Rpb1, domain 5 CA604_07995 PF05000 RNA polymerase Rpb1, domain 4 CA604_08000 PF00562 RNA polymerase Rpb2, domain 6 CA604_08000 PF04560 RNA polymerase Rpb2, domain 7 CA604_08000 PF04561 RNA polymerase Rpb2, domain 2 CA604_08000 PF04563 RNA polymerase beta subunit CA604_08000 PF04565 RNA polymerase Rpb2, domain 3 CA604_08000 PF10385 RNA polymerase beta subunit external 1 domain CA604_08005 PF00542 Ribosomal protein L7/L12 C-terminal domain CA604_08005 PF16320 CA604_08005 CA604_08010 PF00466 Ribosomal protein L10 CA604_08015 PF00687 Ribosomal protein L1p/L10e family CA604_08020 PF00298 Ribosomal protein L11, RNA binding domain CA604_08020 PF03946 Ribosomal protein L11, N-terminal domain CA604_08025 PF00467 KOW motif CA604_08025 PF02357 Transcription termination factor nusG CA604_08030 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CA604_08040 PF00009 Elongation factor Tu GTP binding domain CA604_08040 PF03143 Elongation factor Tu C-terminal domain CA604_08040 PF03144 Elongation factor Tu domain 2 CA604_08045 PF08238 Sel1 repeat CA604_08065 PF02195 ParB-like nuclease domain CA604_08070 PF13614 AAA domain CA604_08075 PF02527 rRNA small subunit methyltransferase G CA604_08080 PF01134 Glucose inhibited division protein A CA604_08080 PF13932 GidA associated domain 3 CA604_08085 PF01230 HIT domain CA604_08090 PF02096 60Kd inner membrane protein CA604_08090 PF14849 YidC periplasmic domain CA604_08095 PF01809 CA604_08095 CA604_08100 PF00825 Ribonuclease P CA604_08105 PF00468 Ribosomal protein L34