CA604_00005 SM00382 ATPases associated with a variety of cellular activities CA604_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain CA604_00010 SM00480 DNA polymerase III beta subunit CA604_00015 SM00387 Histidine kinase-like ATPases CA604_00015 SM00433 TopoisomeraseII CA604_00025 SM00382 ATPases associated with a variety of cellular activities CA604_00040 SM00382 ATPases associated with a variety of cellular activities CA604_00070 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CA604_00070 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CA604_00070 SM00493 CA604_00070 CA604_00075 SM00729 Elongator protein 3, MiaB family, Radical SAM CA604_00110 SM00836 DALR anticodon binding domain CA604_00110 SM01016 Arginyl tRNA synthetase N terminal dom CA604_00120 SM00917 LeuA allosteric (dimerisation) domain CA604_00195 SM00062 Bacterial periplasmic substrate-binding proteins CA604_00210 SM00382 ATPases associated with a variety of cellular activities CA604_00285 SM00936 Penicillin-binding protein 5, C-terminal domain CA604_00315 SM00729 Elongator protein 3, MiaB family, Radical SAM CA604_00350 SM00487 DEAD-like helicases superfamily CA604_00350 SM00490 helicase superfamily c-terminal domain CA604_00370 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CA604_00370 SM00387 Histidine kinase-like ATPases CA604_00370 SM00388 His Kinase A (phosphoacceptor) domain CA604_00375 SM00448 cheY-homologous receiver domain CA604_00410 SM00382 ATPases associated with a variety of cellular activities CA604_00410 SM01086 C-terminal, D2-small domain, of ClpB protein CA604_00740 SM00450 Rhodanese Homology Domain CA604_00745 SM00855 Phosphoglycerate mutase family CA604_00755 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CA604_00755 SM00245 tail specific protease CA604_00810 SM00382 ATPases associated with a variety of cellular activities CA604_00835 SM00382 ATPases associated with a variety of cellular activities CA604_00865 SM00833 Cobalamin synthesis protein cobW C-terminal domain CA604_00875 SM00382 ATPases associated with a variety of cellular activities CA604_00885 SM00869 Autotransporter beta-domain CA604_00905 SM00845 GatB domain CA604_00950 SM00382 ATPases associated with a variety of cellular activities CA604_00965 SM00382 ATPases associated with a variety of cellular activities CA604_00995 SM00421 helix_turn_helix, Lux Regulon CA604_01055 SM00382 ATPases associated with a variety of cellular activities CA604_01055 SM01086 C-terminal, D2-small domain, of ClpB protein CA604_01085 SM00487 DEAD-like helicases superfamily CA604_01085 SM00490 helicase superfamily c-terminal domain CA604_01105 SM00487 DEAD-like helicases superfamily CA604_01160 SM00382 ATPases associated with a variety of cellular activities CA604_01165 SM00382 ATPases associated with a variety of cellular activities CA604_01200 SM00925 MltA specific insert domain CA604_01215 SM00749 bacterial OsmY and nodulation domain CA604_01255 SM00382 ATPases associated with a variety of cellular activities CA604_01275 SM00116 Domain in cystathionine beta-synthase and other proteins. CA604_01290 SM00387 Histidine kinase-like ATPases CA604_01290 SM00388 His Kinase A (phosphoacceptor) domain CA604_01295 SM00448 cheY-homologous receiver domain CA604_01295 SM00862 Transcriptional regulatory protein, C terminal CA604_01340 SM00870 CA604_01340 CA604_01385 SM00937 CA604_01385 CA604_01475 SM00829 Enoylreductase CA604_01520 SM00905 Dihydroneopterin aldolase CA604_01530 SM00155 Phospholipase D. Active site motifs. CA604_01545 SM00062 Bacterial periplasmic substrate-binding proteins CA604_01555 SM00729 Elongator protein 3, MiaB family, Radical SAM CA604_01555 SM00876 Biotin and Thiamin Synthesis associated domain CA604_01565 SM00479 CA604_01565 CA604_01570 SM00479 CA604_01570 CA604_01605 SM00644 CA604_01605 CA604_01620 SM00382 ATPases associated with a variety of cellular activities CA604_01620 SM00962 SRP54-type protein, GTPase domain CA604_01620 SM00963 SRP54-type protein, helical bundle domain CA604_01625 SM00257 Lysin motif CA604_01700 SM00984 UDP binding domain CA604_01735 SM01400 CA604_01735 CA604_01805 SM00382 ATPases associated with a variety of cellular activities CA604_01805 SM00962 SRP54-type protein, GTPase domain CA604_01805 SM00963 SRP54-type protein, helical bundle domain CA604_01810 SM00880 CA604_01810 CA604_01810 SM01118 CA604_01810 CA604_01815 SM00347 helix_turn_helix multiple antibiotic resistance protein CA604_01850 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CA604_01865 SM00883 Chaperonin 10 Kd subunit CA604_01870 SM00062 Bacterial periplasmic substrate-binding proteins CA604_02045 SM00382 ATPases associated with a variety of cellular activities CA604_02055 SM00460 Transglutaminase/protease-like homologues CA604_02060 SM00460 Transglutaminase/protease-like homologues CA604_02115 SM00151 SWI complex, BAF60b domains CA604_02155 SM00382 ATPases associated with a variety of cellular activities CA604_02160 SM00382 ATPases associated with a variety of cellular activities CA604_02165 SM00829 Enoylreductase CA604_02235 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CA604_02240 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CA604_02290 SM00487 DEAD-like helicases superfamily CA604_02290 SM00490 helicase superfamily c-terminal domain CA604_02290 SM00982 CA604_02290 CA604_02290 SM01058 CarD-like/TRCF domain CA604_02310 SM00387 Histidine kinase-like ATPases CA604_02310 SM00388 His Kinase A (phosphoacceptor) domain CA604_02315 SM00448 cheY-homologous receiver domain CA604_02315 SM00862 Transcriptional regulatory protein, C terminal CA604_02345 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CA604_02345 SM00292 breast cancer carboxy-terminal domain CA604_02345 SM00532 Ligase N family CA604_02385 SM00382 ATPases associated with a variety of cellular activities CA604_02390 SM00382 ATPases associated with a variety of cellular activities CA604_02395 SM00478 endonuclease III CA604_02395 SM00525 CA604_02395 CA604_02420 SM00954 Region found in RelA / SpoT proteins CA604_02430 SM00316 Ribosomal protein S1-like RNA-binding domain CA604_02435 SM00363 S4 RNA-binding domain CA604_02475 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CA604_02480 SM00822 CA604_02480 CA604_02490 SM00825 Beta-ketoacyl synthase CA604_02500 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CA604_02505 SM00838 Elongation factor G C-terminus CA604_02515 SM00358 Double-stranded RNA binding motif CA604_02515 SM00535 Ribonuclease III family CA604_02645 SM01209 CA604_02645 CA604_02645 SM01210 CA604_02645 CA604_02730 SM00382 ATPases associated with a variety of cellular activities CA604_02740 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CA604_02740 SM00245 tail specific protease CA604_02770 SM00434 DNA Topoisomerase IV CA604_02780 SM00830 Chorismate mutase type II CA604_02795 SM00316 Ribosomal protein S1-like RNA-binding domain CA604_02800 SM00411 bacterial (prokaryotic) histone like domain CA604_02820 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CA604_02865 SM00100 Cyclic nucleotide-monophosphate binding domain CA604_02865 SM00419 helix_turn_helix, cAMP Regulatory protein CA604_02895 SM00981 CA604_02895 CA604_02925 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CA604_02930 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CA604_02930 SM00534 ATPase domain of DNA mismatch repair MUTS family CA604_02965 SM00028 Tetratricopeptide repeats CA604_02970 SM00840 CA604_02970 CA604_03015 SM00382 ATPases associated with a variety of cellular activities CA604_03040 SM00841 Elongation factor P, C-terminal CA604_03040 SM01185 CA604_03040 CA604_03080 SM00014 Acid phosphatase homologues CA604_03100 SM00357 Cold shock protein domain CA604_03100 SM00382 ATPases associated with a variety of cellular activities CA604_03100 SM00959 Rho termination factor, N-terminal domain CA604_03110 SM00387 Histidine kinase-like ATPases CA604_03110 SM00433 TopoisomeraseII CA604_03115 SM00434 DNA Topoisomerase IV CA604_03130 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CA604_03155 SM00226 Low molecular weight phosphatase family CA604_03180 SM00271 DnaJ molecular chaperone homology domain CA604_03195 SM00671 Sel1-like repeats. CA604_03200 SM00671 Sel1-like repeats. CA604_03205 SM00671 Sel1-like repeats. CA604_03210 SM00671 Sel1-like repeats. CA604_03215 SM00671 Sel1-like repeats. CA604_03245 SM00382 ATPases associated with a variety of cellular activities CA604_03260 SM00849 Metallo-beta-lactamase superfamily CA604_03265 SM00481 DNA polymerase alpha chain like domain CA604_03300 SM00873 B3/4 domain CA604_03300 SM00874 tRNA synthetase B5 domain CA604_03300 SM00896 Ferredoxin-fold anticodon binding domain CA604_03305 SM00411 bacterial (prokaryotic) histone like domain CA604_03310 SM00422 helix_turn_helix, mercury resistance CA604_03355 SM01211 CA604_03355 CA604_03360 SM00116 Domain in cystathionine beta-synthase and other proteins. CA604_03360 SM01240 CA604_03360 CA604_03385 SM00671 Sel1-like repeats. CA604_03440 SM00382 ATPases associated with a variety of cellular activities CA604_03470 SM00382 ATPases associated with a variety of cellular activities CA604_03475 SM00382 ATPases associated with a variety of cellular activities CA604_03495 SM00919 Malic enzyme, NAD binding domain CA604_03495 SM01274 CA604_03495 CA604_03500 SM00861 Transketolase, pyrimidine binding domain CA604_03535 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CA604_03535 SM00954 Region found in RelA / SpoT proteins CA604_03540 SM01409 CA604_03540 CA604_03545 SM00072 Guanylate kinase homologues. CA604_03550 SM00670 Large family of predicted nucleotide-binding domains CA604_03580 SM01005 Alanine racemase, C-terminal domain CA604_03585 SM00382 ATPases associated with a variety of cellular activities CA604_03595 SM00382 ATPases associated with a variety of cellular activities CA604_03625 SM00382 ATPases associated with a variety of cellular activities CA604_03625 SM00487 DEAD-like helicases superfamily CA604_03625 SM00490 helicase superfamily c-terminal domain CA604_03625 SM00847 Helicase associated domain (HA2) Add an annotation CA604_03630 SM00481 DNA polymerase alpha chain like domain CA604_03640 SM00382 ATPases associated with a variety of cellular activities CA604_03645 SM00316 Ribosomal protein S1-like RNA-binding domain CA604_03680 SM00318 Staphylococcal nuclease homologues CA604_03715 SM00382 ATPases associated with a variety of cellular activities CA604_03735 SM00316 Ribosomal protein S1-like RNA-binding domain CA604_03735 SM00357 Cold shock protein domain CA604_03735 SM00955 CA604_03735 CA604_03740 SM00967 RNA 2'-O ribose methyltransferase substrate binding CA604_03750 SM00411 bacterial (prokaryotic) histone like domain CA604_03760 SM00382 ATPases associated with a variety of cellular activities CA604_03855 SM00382 ATPases associated with a variety of cellular activities CA604_03860 SM00382 ATPases associated with a variety of cellular activities CA604_03880 SM00421 helix_turn_helix, Lux Regulon CA604_03880 SM00448 cheY-homologous receiver domain CA604_03885 SM00091 PAS domain CA604_03885 SM00387 Histidine kinase-like ATPases CA604_03885 SM00388 His Kinase A (phosphoacceptor) domain CA604_03945 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CA604_03990 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CA604_04000 SM00935 Outer membrane protein (OmpH-like) CA604_04055 SM00244 prohibitin homologues CA604_04100 SM00248 ankyrin repeats CA604_04220 SM00363 S4 RNA-binding domain CA604_04225 SM00938 Nitrogen regulatory protein P-II CA604_04250 SM00382 ATPases associated with a variety of cellular activities CA604_04265 SM00487 DEAD-like helicases superfamily CA604_04265 SM00490 helicase superfamily c-terminal domain CA604_04335 SM00382 ATPases associated with a variety of cellular activities CA604_04340 SM00382 ATPases associated with a variety of cellular activities CA604_04360 SM00859 Semialdehyde dehydrogenase, NAD binding domain CA604_04365 SM01329 CA604_04365 CA604_04410 SM00116 Domain in cystathionine beta-synthase and other proteins. CA604_04425 SM00893 Electron transfer flavoprotein domain CA604_04430 SM00893 Electron transfer flavoprotein domain CA604_04440 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CA604_04440 SM00465 GIY-YIG type nucleases (URI domain) CA604_04455 SM00479 CA604_04455 CA604_04485 SM00240 Forkhead associated domain CA604_04495 SM00858 CA604_04495 CA604_04520 SM00986 Uracil DNA glycosylase superfamily CA604_04520 SM00987 UreE urease accessory protein, C-terminal domain CA604_04565 SM00671 Sel1-like repeats. CA604_04575 SM00400 zinc finger CA604_04575 SM00493 CA604_04575 CA604_04590 SM00788 Adenylosuccinate synthetase CA604_04595 SM00244 prohibitin homologues CA604_04600 SM00244 prohibitin homologues CA604_04620 SM00564 beta-propeller repeat CA604_04650 SM00562 CA604_04650 CA604_04695 SM00881 CoA binding domain CA604_04730 SM00257 Lysin motif CA604_04745 SM01207 CA604_04745 CA604_04765 SM00382 ATPases associated with a variety of cellular activities CA604_04800 SM00347 helix_turn_helix multiple antibiotic resistance protein CA604_04810 SM01005 Alanine racemase, C-terminal domain CA604_04825 SM00671 Sel1-like repeats. CA604_04835 SM00671 Sel1-like repeats. CA604_04845 SM00833 Cobalamin synthesis protein cobW C-terminal domain CA604_04860 SM00382 ATPases associated with a variety of cellular activities CA604_04970 SM00248 ankyrin repeats CA604_05045 SM00382 ATPases associated with a variety of cellular activities CA604_05045 SM01086 C-terminal, D2-small domain, of ClpB protein CA604_05060 SM01192 CA604_05060 CA604_05060 SM01193 CA604_05060 CA604_05115 SM01150 CA604_05115 CA604_05185 SM00838 Elongation factor G C-terminus CA604_05205 SM00316 Ribosomal protein S1-like RNA-binding domain CA604_05215 SM00363 S4 RNA-binding domain CA604_05230 SM00363 S4 RNA-binding domain CA604_05265 SM00904 Riboflavin kinase CA604_05310 SM00382 ATPases associated with a variety of cellular activities CA604_05310 SM01086 C-terminal, D2-small domain, of ClpB protein CA604_05315 SM00357 Cold shock protein domain CA604_05345 SM00382 ATPases associated with a variety of cellular activities CA604_05360 SM01230 CA604_05360 CA604_05365 SM00729 Elongator protein 3, MiaB family, Radical SAM CA604_05385 SM00382 ATPases associated with a variety of cellular activities CA604_05415 SM00861 Transketolase, pyrimidine binding domain CA604_05450 SM00345 helix_turn_helix gluconate operon transcriptional repressor CA604_05450 SM00866 CA604_05450 CA604_05455 SM00450 Rhodanese Homology Domain CA604_05470 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CA604_05470 SM00474 3'-5' exonuclease CA604_05470 SM00475 5'-3' exonuclease CA604_05470 SM00482 DNA polymerase A domain CA604_05480 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CA604_05510 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CA604_05520 SM00382 ATPases associated with a variety of cellular activities CA604_05520 SM00464 Found in ATP-dependent protease La (LON) CA604_05525 SM00382 ATPases associated with a variety of cellular activities CA604_05525 SM00994 ClpX C4-type zinc finger CA604_05525 SM01086 C-terminal, D2-small domain, of ClpB protein CA604_05805 SM00530 Helix-turn-helix XRE-family like proteins CA604_05820 SM00530 Helix-turn-helix XRE-family like proteins CA604_05855 SM01130 CA604_05855 CA604_05890 SM00382 ATPases associated with a variety of cellular activities CA604_05915 SM00327 von Willebrand factor (vWF) type A domain CA604_05920 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CA604_05930 SM00316 Ribosomal protein S1-like RNA-binding domain CA604_05930 SM00322 K homology RNA-binding domain CA604_05935 SM01387 CA604_05935 CA604_05975 SM00382 ATPases associated with a variety of cellular activities CA604_05985 SM00843 CA604_05985 CA604_05995 SM00463 Small MutS-related domain CA604_06020 SM00869 Autotransporter beta-domain CA604_06025 SM00271 DnaJ molecular chaperone homology domain CA604_06115 SM00382 ATPases associated with a variety of cellular activities CA604_06155 SM00382 ATPases associated with a variety of cellular activities CA604_06165 SM01103 CA604_06165 CA604_06185 SM00851 MGS-like domain CA604_06185 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CA604_06190 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CA604_06195 SM00493 CA604_06195 CA604_06210 SM00382 ATPases associated with a variety of cellular activities CA604_06285 SM00646 CA604_06285 CA604_06290 SM00853 MutL C terminal dimerisation domain CA604_06290 SM01340 CA604_06290 CA604_06380 SM00487 DEAD-like helicases superfamily CA604_06380 SM00490 helicase superfamily c-terminal domain CA604_06400 SM00798 AICARFT/IMPCHase bienzyme CA604_06400 SM00851 MGS-like domain CA604_06410 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CA604_06425 SM00382 ATPases associated with a variety of cellular activities CA604_06485 SM00116 Domain in cystathionine beta-synthase and other proteins. CA604_06485 SM00924 MgtE intracellular N domain CA604_06490 SM00957 SecA DEAD-like domain CA604_06490 SM00958 SecA preprotein cross-linking domain CA604_06510 SM00864 Tubulin/FtsZ family, GTPase domain CA604_06510 SM00865 Tubulin/FtsZ family, C-terminal domain CA604_06515 SM00842 Cell division protein FtsA CA604_06525 SM01209 CA604_06525 CA604_06585 SM01060 CA604_06585 CA604_06605 SM00563 Phosphate acyltransferases CA604_06615 SM00650 Ribosomal RNA adenine dimethylases CA604_06645 SM00448 cheY-homologous receiver domain CA604_06645 SM00862 Transcriptional regulatory protein, C terminal CA604_06650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CA604_06650 SM00387 Histidine kinase-like ATPases CA604_06650 SM00388 His Kinase A (phosphoacceptor) domain CA604_06680 SM00382 ATPases associated with a variety of cellular activities CA604_06725 SM01001 AIR carboxylase CA604_06750 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CA604_06755 SM00861 Transketolase, pyrimidine binding domain CA604_06810 SM01323 CA604_06810 CA604_06825 SM00729 Elongator protein 3, MiaB family, Radical SAM CA604_06840 SM00116 Domain in cystathionine beta-synthase and other proteins. CA604_06840 SM01091 Transporter associated domain CA604_06865 SM00382 ATPases associated with a variety of cellular activities CA604_06910 SM00849 Metallo-beta-lactamase superfamily CA604_06915 SM00257 Lysin motif CA604_07025 SM00878 Biotin carboxylase C-terminal domain CA604_07040 SM00955 CA604_07040 CA604_07055 SM00563 Phosphate acyltransferases CA604_07070 SM00732 Likely ribonuclease with RNase H fold. CA604_07095 SM00487 DEAD-like helicases superfamily CA604_07095 SM00490 helicase superfamily c-terminal domain CA604_07200 SM00996 S-adenosyl-L-homocysteine hydrolase CA604_07200 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CA604_07265 SM00382 ATPases associated with a variety of cellular activities CA604_07275 SM00098 Alkaline phosphatase homologues CA604_07280 SM00421 helix_turn_helix, Lux Regulon CA604_07280 SM00448 cheY-homologous receiver domain CA604_07285 SM00387 Histidine kinase-like ATPases CA604_07285 SM00388 His Kinase A (phosphoacceptor) domain CA604_07390 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CA604_07430 SM00382 ATPases associated with a variety of cellular activities CA604_07455 SM00382 ATPases associated with a variety of cellular activities CA604_07475 SM00116 Domain in cystathionine beta-synthase and other proteins. CA604_07475 SM01091 Transporter associated domain CA604_07510 SM00382 ATPases associated with a variety of cellular activities CA604_07520 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CA604_07540 SM01219 CA604_07540 CA604_07570 SM01004 Delta-aminolevulinic acid dehydratase CA604_07610 SM00662 RNA polymerases D CA604_07615 SM00363 S4 RNA-binding domain CA604_07615 SM01390 CA604_07615 CA604_07635 SM00316 Ribosomal protein S1-like RNA-binding domain CA604_07685 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CA604_07690 SM01374 CA604_07690 CA604_07795 SM00322 K homology RNA-binding domain CA604_07810 SM01382 CA604_07810 CA604_07810 SM01383 CA604_07810 CA604_07845 SM00382 ATPases associated with a variety of cellular activities CA604_07845 SM00930 CA604_07845 CA604_07865 SM01403 CA604_07865 CA604_07870 SM00382 ATPases associated with a variety of cellular activities CA604_07885 SM00838 Elongation factor G C-terminus CA604_07885 SM00889 Elongation factor G, domain IV CA604_07945 SM00530 Helix-turn-helix XRE-family like proteins CA604_07970 SM00859 Semialdehyde dehydrogenase, NAD binding domain CA604_07995 SM00663 RNA polymerase I subunit A N-terminus CA604_08020 SM00649 Ribosomal protein L11/L12 CA604_08025 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CA604_08025 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CA604_08045 SM00671 Sel1-like repeats. CA604_08065 SM00470 ParB-like nuclease domain CA604_08080 SM01228 CA604_08080 CA604_08095 SM01234 CA604_08095