CA943_00005 PF00308 Bacterial dnaA protein CA943_00005 PF08299 Bacterial dnaA protein helix-turn-helix CA943_00005 PF11638 DnaA N-terminal domain CA943_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CA943_00010 PF02767 DNA polymerase III beta subunit, central domain CA943_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CA943_00015 PF00204 DNA gyrase B CA943_00015 PF00986 DNA gyrase B subunit, carboxyl terminus CA943_00015 PF01751 Toprim domain CA943_00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA943_00020 PF00849 RNA pseudouridylate synthase CA943_00025 PF00005 ABC transporter CA943_00030 PF00528 Binding-protein-dependent transport system inner membrane component CA943_00035 PF00528 Binding-protein-dependent transport system inner membrane component CA943_00035 PF12911 CA943_00035 CA943_00040 PF00005 ABC transporter CA943_00040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CA943_00045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CA943_00050 PF09992 Predicted periplasmic protein (DUF2233) CA943_00055 PF00580 UvrD/REP helicase N-terminal domain CA943_00055 PF01443 Viral (Superfamily 1) RNA helicase CA943_00060 PF00175 Oxidoreductase NAD-binding domain CA943_00060 PF00970 Oxidoreductase FAD-binding domain CA943_00065 PF06097 CA943_00065 CA943_00070 PF01131 DNA topoisomerase CA943_00070 PF01751 Toprim domain CA943_00070 PF13342 CA943_00070 CA943_00075 PF04055 Radical SAM superfamily CA943_00075 PF06969 HemN C-terminal domain CA943_00080 PF13679 CA943_00080 CA943_00085 PF00749 tRNA synthetases class I (E and Q), catalytic domain CA943_00090 PF04361 CA943_00090 CA943_00095 PF11738 Protein of unknown function (DUF3298) CA943_00100 PF13462 Thioredoxin CA943_00105 PF05036 Sporulation related domain CA943_00110 PF00750 tRNA synthetases class I (R) CA943_00110 PF03485 Arginyl tRNA synthetase N terminal domain CA943_00110 PF05746 DALR anticodon binding domain CA943_00115 PF08895 CA943_00115 CA943_00120 PF00682 HMGL-like CA943_00120 PF08502 LeuA allosteric (dimerisation) domain CA943_00130 PF08238 Sel1 repeat CA943_00135 PF04324 BFD-like [2Fe-2S] binding domain CA943_00140 PF00210 Ferritin-like domain CA943_00150 PF00009 Elongation factor Tu GTP binding domain CA943_00150 PF16658 CA943_00150 CA943_00155 PF04011 LemA family CA943_00160 PF04536 TLP18 CA943_00165 PF04536 TLP18 CA943_00170 PF01926 50S ribosome-binding GTPase CA943_00170 PF11981 CA943_00170 CA943_00175 PF11067 CA943_00175 CA943_00180 PF06803 CA943_00180 CA943_00185 PF04226 CA943_00185 CA943_00190 PF03956 CA943_00190 CA943_00195 PF00497 Bacterial extracellular solute-binding proteins, family 3 CA943_00200 PF00528 Binding-protein-dependent transport system inner membrane component CA943_00205 PF00528 Binding-protein-dependent transport system inner membrane component CA943_00210 PF00005 ABC transporter CA943_00215 PF01925 CA943_00215 CA943_00220 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme CA943_00230 PF01040 UbiA prenyltransferase family CA943_00235 PF07399 CA943_00235 CA943_00240 PF00152 tRNA synthetases class II (D, K and N) CA943_00240 PF01336 OB-fold nucleic acid binding domain CA943_00240 PF02938 GAD domain CA943_00255 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CA943_00260 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CA943_00265 PF03099 Biotin/lipoate A/B protein ligase family CA943_00270 PF03309 Type III pantothenate kinase CA943_00280 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CA943_00285 PF00768 D-alanyl-D-alanine carboxypeptidase CA943_00285 PF07943 Penicillin-binding protein 5, C-terminal domain CA943_00290 PF01063 Aminotransferase class IV CA943_00295 PF04359 Protein of unknown function (DUF493) CA943_00300 PF03099 Biotin/lipoate A/B protein ligase family CA943_00305 PF04355 SmpA / OmlA family CA943_00315 PF04055 Radical SAM superfamily CA943_00315 PF16881 CA943_00315 CA943_00320 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CA943_00320 PF16363 CA943_00320 CA943_00325 PF07690 Major Facilitator Superfamily CA943_00330 PF00132 Bacterial transferase hexapeptide (six repeats) CA943_00330 PF12804 MobA-like NTP transferase domain CA943_00335 PF00293 NUDIX domain CA943_00340 PF00140 Sigma-70 factor, region 1 CA943_00340 PF04542 Sigma-70 region 2 CA943_00340 PF04545 Sigma-70, region 4 CA943_00345 PF03279 CA943_00345 CA943_00350 PF00270 DEAD/DEAH box helicase CA943_00350 PF00271 Helicase conserved C-terminal domain CA943_00350 PF03880 DbpA RNA binding domain CA943_00355 PF00551 Formyl transferase CA943_00355 PF02911 Formyl transferase, C-terminal domain CA943_00360 PF01189 NOL1/NOP2/sun family CA943_00365 PF14334 CA943_00365 CA943_00370 PF00512 His Kinase A (phospho-acceptor) domain CA943_00370 PF00672 HAMP domain CA943_00370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA943_00375 PF00072 Response regulator receiver domain CA943_00380 PF02080 TrkA-C domain CA943_00380 PF02254 TrkA-N domain CA943_00385 PF02386 Cation transport protein CA943_00390 PF00588 SpoU rRNA Methylase family CA943_00395 PF00156 Phosphoribosyl transferase domain CA943_00400 PF08241 Methyltransferase domain CA943_00405 PF06996 CA943_00405 CA943_00410 PF00004 ATPase family associated with various cellular activities (AAA) CA943_00410 PF07724 AAA domain (Cdc48 subfamily) CA943_00410 PF10431 C-terminal, D2-small domain, of ClpB protein CA943_00425 PF12790 Type VI secretion lipoprotein CA943_00430 PF05936 CA943_00430 CA943_00435 PF00691 OmpA family CA943_00435 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) CA943_00440 PF06744 CA943_00440 CA943_00440 PF06761 CA943_00440 CA943_00440 PF14331 CA943_00440 CA943_00445 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) CA943_00450 PF08308 CA943_00450 CA943_00455 PF06812 CA943_00455 CA943_00460 PF05591 CA943_00460 CA943_00465 PF05943 CA943_00465 CA943_00470 PF05638 Protein of unknown function (DUF796) CA943_00475 PF07024 ImpE protein CA943_00480 PF04965 Gene 25-like lysozyme CA943_00485 PF05947 CA943_00485 CA943_00490 PF12059 CA943_00490 CA943_00495 PF00593 TonB dependent receptor CA943_00495 PF07715 TonB-dependent Receptor Plug Domain CA943_00505 PF05954 Phage late control gene D protein (GPD) CA943_00515 PF09937 CA943_00515 CA943_00515 PF13599 Pentapeptide repeats (9 copies) CA943_00520 PF00805 Pentapeptide repeats (8 copies) CA943_00520 PF13599 Pentapeptide repeats (9 copies) CA943_00525 PF12059 CA943_00525 CA943_00530 PF13665 CA943_00530 CA943_00570 PF02556 Preprotein translocase subunit SecB CA943_00575 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CA943_00575 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CA943_00580 PF00462 Glutaredoxin CA943_00585 PF00581 Rhodanese-like domain CA943_00590 PF00300 Histidine phosphatase superfamily (branch 1) CA943_00595 PF01551 Peptidase family M23 CA943_00600 PF03572 Peptidase family S41 CA943_00600 PF13180 PDZ domain CA943_00605 PF00899 ThiF family CA943_00610 PF03480 Bacterial extracellular solute-binding protein, family 7 CA943_00615 PF05299 M61 glycyl aminopeptidase CA943_00615 PF13180 PDZ domain CA943_00620 PF03899 CA943_00620 CA943_00625 PF00119 ATP synthase A chain CA943_00630 PF00137 ATP synthase subunit C CA943_00635 PF00430 ATP synthase B/B' CF(0) CA943_00640 PF00213 ATP synthase delta (OSCP) subunit CA943_00645 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CA943_00645 PF00306 ATP synthase alpha/beta chain, C terminal domain CA943_00645 PF02874 ATP synthase alpha/beta family, beta-barrel domain CA943_00650 PF00231 ATP synthase CA943_00655 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CA943_00655 PF02874 ATP synthase alpha/beta family, beta-barrel domain CA943_00660 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CA943_00665 PF16695 CA943_00665 CA943_00680 PF00005 ABC transporter CA943_00690 PF16149 CA943_00690 CA943_00695 PF06808 CA943_00695 CA943_00700 PF04290 CA943_00700 CA943_00705 PF03480 Bacterial extracellular solute-binding protein, family 7 CA943_00710 PF02492 CobW/HypB/UreG, nucleotide-binding domain CA943_00710 PF07683 Cobalamin synthesis protein cobW C-terminal domain CA943_00715 PF01475 Ferric uptake regulator family CA943_00720 PF00005 ABC transporter CA943_00725 PF00950 CA943_00725 CA943_00735 PF00589 Phage integrase family CA943_00735 PF02899 Phage integrase, N-terminal SAM-like domain CA943_00740 PF04340 Protein of unknown function, DUF484 CA943_00745 PF01678 Diaminopimelate epimerase CA943_00750 PF02637 GatB domain CA943_00750 PF02934 GatB/GatE catalytic domain CA943_00755 PF01425 Amidase CA943_00760 PF02686 Glu-tRNAGln amidotransferase C subunit CA943_00765 PF06723 MreB/Mbl protein CA943_00770 PF04085 rod shape-determining protein MreC CA943_00775 PF04093 CA943_00775 CA943_00780 PF00905 Penicillin binding protein transpeptidase domain CA943_00780 PF03717 Penicillin-binding Protein dimerisation domain CA943_00785 PF01098 CA943_00785 CA943_00790 PF02687 CA943_00790 CA943_00795 PF00005 ABC transporter CA943_00800 PF00528 Binding-protein-dependent transport system inner membrane component CA943_00805 PF00528 Binding-protein-dependent transport system inner membrane component CA943_00810 PF00005 ABC transporter CA943_00820 PF02569 Pantoate-beta-alanine ligase CA943_00825 PF02616 ScpA/B protein CA943_00830 PF11943 CA943_00830 CA943_00835 PF00196 Bacterial regulatory proteins, luxR family CA943_00845 PF01121 Dephospho-CoA kinase CA943_00850 PF07072 Protein of unknown function (DUF1342) CA943_00855 PF00132 Bacterial transferase hexapeptide (six repeats) CA943_00860 PF00293 NUDIX domain CA943_00860 PF02581 Thiamine monophosphate synthase/TENI CA943_00865 PF05673 Protein of unknown function (DUF815) CA943_00870 PF00348 Polyprenyl synthetase CA943_00875 PF00920 Dehydratase family CA943_00880 PF01018 GTP1/OBG CA943_00880 PF01926 50S ribosome-binding GTPase CA943_00885 PF13449 Esterase-like activity of phytase CA943_00890 PF11604 Copper binding periplasmic protein CusF CA943_00895 PF00004 ATPase family associated with various cellular activities (AAA) CA943_00895 PF07724 AAA domain (Cdc48 subfamily) CA943_00895 PF10431 C-terminal, D2-small domain, of ClpB protein CA943_00900 PF00227 Proteasome subunit CA943_00905 PF13449 Esterase-like activity of phytase CA943_00910 PF01258 Prokaryotic dksA/traR C4-type zinc finger CA943_00915 PF02954 Bacterial regulatory protein, Fis family CA943_00920 PF01208 Uroporphyrinogen decarboxylase (URO-D) CA943_00925 PF00270 DEAD/DEAH box helicase CA943_00925 PF00271 Helicase conserved C-terminal domain CA943_00930 PF01557 Fumarylacetoacetate (FAA) hydrolase family CA943_00940 PF01136 CA943_00940 CA943_00940 PF16325 CA943_00940 CA943_00945 PF00271 Helicase conserved C-terminal domain CA943_00945 PF04851 Type III restriction enzyme, res subunit CA943_00950 PF09827 CRISPR associated protein Cas2 CA943_00955 PF01867 CRISPR associated protein Cas1 CA943_00960 PF01930 Domain of unknown function DUF83 CA943_00965 PF05107 CA943_00965 CA943_00970 PF09709 CA943_00970 CA943_00975 PF09704 CRISPR-associated protein (Cas_Cas5) CA943_00980 PF13086 AAA domain CA943_00980 PF13087 AAA domain CA943_00985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CA943_00990 PF00528 Binding-protein-dependent transport system inner membrane component CA943_00995 PF00528 Binding-protein-dependent transport system inner membrane component CA943_00995 PF12911 CA943_00995 CA943_01000 PF00005 ABC transporter CA943_01000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CA943_01005 PF00005 ABC transporter CA943_01005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CA943_01020 PF01016 Ribosomal L27 protein CA943_01025 PF00829 Ribosomal prokaryotic L21 protein CA943_01030 PF01230 HIT domain CA943_01035 PF00834 Ribulose-phosphate 3 epimerase family CA943_01040 PF03562 MltA specific insert domain CA943_01040 PF06725 3D domain CA943_01045 PF10411 Disulfide bond isomerase protein N-terminus CA943_01045 PF13098 Thioredoxin-like domain CA943_01050 PF08534 Redoxin CA943_01055 PF04972 BON domain CA943_01060 PF13580 SIS domain CA943_01065 PF02021 Uncharacterised protein family UPF0102 CA943_01070 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CA943_01075 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel CA943_01080 PF03668 CA943_01080 CA943_01085 PF02603 HPr Serine kinase N terminus CA943_01085 PF07475 HPr Serine kinase C-terminal domain CA943_01090 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CA943_01095 PF00005 ABC transporter CA943_01095 PF12399 Branched-chain amino acid ATP-binding cassette transporter CA943_01100 PF03968 OstA-like protein CA943_01105 PF06835 Lipopolysaccharide-assembly, LptC-related CA943_01110 PF08282 haloacid dehalogenase-like hydrolase CA943_01115 PF00571 CBS domain CA943_01115 PF01380 SIS domain CA943_01120 PF00156 Phosphoribosyl transferase domain CA943_01125 PF00291 Pyridoxal-phosphate dependent enzyme CA943_01125 PF00585 C-terminal regulatory domain of Threonine dehydratase CA943_01130 PF00512 His Kinase A (phospho-acceptor) domain CA943_01130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA943_01135 PF00072 Response regulator receiver domain CA943_01135 PF00486 Transcriptional regulatory protein, C terminal CA943_01140 PF01209 ubiE/COQ5 methyltransferase family CA943_01150 PF03109 CA943_01150 CA943_01155 PF01467 Cytidylyltransferase CA943_01160 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CA943_01165 PF08543 Phosphomethylpyrimidine kinase CA943_01170 PF03976 Polyphosphate kinase 2 (PPK2) CA943_01175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CA943_01175 PF07992 Pyridine nucleotide-disulphide oxidoreductase CA943_01180 PF00710 Asparaginase CA943_01185 PF06508 Queuosine biosynthesis protein QueC CA943_01190 PF01242 6-pyruvoyl tetrahydropterin synthase CA943_01195 PF04055 Radical SAM superfamily CA943_01195 PF13394 4Fe-4S single cluster domain CA943_01200 PF01679 CA943_01200 CA943_01210 PF00881 Nitroreductase family CA943_01220 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CA943_01220 PF01488 Shikimate / quinate 5-dehydrogenase CA943_01220 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CA943_01225 PF00472 RF-1 domain CA943_01225 PF03462 PCRF domain CA943_01230 PF13847 Methyltransferase domain CA943_01235 PF00462 Glutaredoxin CA943_01240 PF02441 Flavoprotein CA943_01245 PF07264 Etoposide-induced protein 2 CA943_01250 PF00939 Sodium:sulfate symporter transmembrane region CA943_01255 PF01266 FAD dependent oxidoreductase CA943_01285 PF00202 Aminotransferase class-III CA943_01290 PF00155 Aminotransferase class I and II CA943_01295 PF04301 CA943_01295 CA943_01300 PF13489 Methyltransferase domain CA943_01305 PF13500 AAA domain CA943_01310 PF03009 Glycerophosphoryl diester phosphodiesterase family CA943_01315 PF00107 Zinc-binding dehydrogenase CA943_01315 PF08240 Alcohol dehydrogenase GroES-like domain CA943_01320 PF11692 CA943_01320 CA943_01325 PF06092 CA943_01325 CA943_01330 PF01169 CA943_01330 CA943_01335 PF04575 CA943_01335 CA943_01340 PF14489 QueF-like protein CA943_01340 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CA943_01345 PF01298 Transferrin binding protein-like solute binding protein CA943_01345 PF17483 CA943_01345 CA943_01345 PF17484 CA943_01345 CA943_01350 PF00593 TonB dependent receptor CA943_01350 PF07715 TonB-dependent Receptor Plug Domain CA943_01355 PF01171 PP-loop family CA943_01360 PF02152 Dihydroneopterin aldolase CA943_01365 PF07992 Pyridine nucleotide-disulphide oxidoreductase CA943_01370 PF13091 PLD-like domain CA943_01370 PF13396 CA943_01370 CA943_01375 PF00528 Binding-protein-dependent transport system inner membrane component CA943_01380 PF00528 Binding-protein-dependent transport system inner membrane component CA943_01385 PF00497 Bacterial extracellular solute-binding proteins, family 3 CA943_01390 PF06912 CA943_01390 CA943_01395 PF04055 Radical SAM superfamily CA943_01395 PF06968 Biotin and Thiamin Synthesis associated domain CA943_01400 PF00582 Universal stress protein family CA943_01405 PF00929 Exonuclease CA943_01410 PF00929 Exonuclease CA943_01415 PF13561 Enoyl-(Acyl carrier protein) reductase CA943_01420 PF00551 Formyl transferase CA943_01420 PF01842 ACT domain CA943_01435 PF13274 CA943_01435 CA943_01445 PF01510 N-acetylmuramoyl-L-alanine amidase CA943_01455 PF01578 CA943_01455 CA943_01460 PF00448 SRP54-type protein, GTPase domain CA943_01460 PF02881 SRP54-type protein, helical bundle domain CA943_01460 PF02978 Signal peptide binding domain CA943_01465 PF01476 LysM domain CA943_01465 PF04972 BON domain CA943_01470 PF02390 Putative methyltransferase CA943_01475 PF01588 Putative tRNA binding domain CA943_01475 PF08264 Anticodon-binding domain of tRNA CA943_01475 PF09334 tRNA synthetases class I (M) CA943_01485 PF10609 ParA/MinD ATPase like CA943_01490 PF01103 Surface antigen CA943_01490 PF07244 Surface antigen variable number repeat CA943_01490 PF17243 CA943_01490 CA943_01495 PF04357 CA943_01495 CA943_01500 PF00692 dUTPase CA943_01505 PF03486 HI0933-like protein CA943_01510 PF01717 Cobalamin-independent synthase, Catalytic domain CA943_01515 PF01571 Aminomethyltransferase folate-binding domain CA943_01515 PF08669 Glycine cleavage T-protein C-terminal barrel domain CA943_01520 PF01597 Glycine cleavage H-protein CA943_01525 PF02347 Glycine cleavage system P-protein CA943_01530 PF00303 Thymidylate synthase CA943_01535 PF00186 Dihydrofolate reductase CA943_01540 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CA943_01540 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CA943_01540 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CA943_01545 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CA943_01545 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CA943_01545 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CA943_01545 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CA943_01550 PF01565 FAD binding domain CA943_01550 PF02913 FAD linked oxidases, C-terminal domain CA943_01560 PF03550 Outer membrane lipoprotein LolB CA943_01565 PF00288 GHMP kinases N terminal domain CA943_01565 PF08544 GHMP kinases C terminal CA943_01575 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CA943_01575 PF14572 Phosphoribosyl synthetase-associated domain CA943_01580 PF01386 Ribosomal L25p family CA943_01580 PF14693 Ribosomal protein TL5, C-terminal domain CA943_01590 PF03895 YadA-like C-terminal region CA943_01590 PF05662 Coiled stalk of trimeric autotransporter adhesin CA943_01590 PF13018 CA943_01590 CA943_01595 PF03895 YadA-like C-terminal region CA943_01595 PF05662 Coiled stalk of trimeric autotransporter adhesin CA943_01605 PF03895 YadA-like C-terminal region CA943_01605 PF05662 Coiled stalk of trimeric autotransporter adhesin CA943_01610 PF01195 Peptidyl-tRNA hydrolase CA943_01615 PF02517 CAAX protease self-immunity CA943_01620 PF01926 50S ribosome-binding GTPase CA943_01620 PF06071 Protein of unknown function (DUF933) CA943_01625 PF12838 4Fe-4S dicluster domain CA943_01630 PF01467 Cytidylyltransferase CA943_01635 PF03602 Conserved hypothetical protein 95 CA943_01640 PF00448 SRP54-type protein, GTPase domain CA943_01640 PF02881 SRP54-type protein, helical bundle domain CA943_01645 PF01928 CYTH domain CA943_01645 PF05235 CHAD domain CA943_01650 PF01047 MarR family CA943_01655 PF00925 GTP cyclohydrolase II CA943_01655 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CA943_01660 PF00885 6,7-dimethyl-8-ribityllumazine synthase CA943_01665 PF01029 NusB family CA943_01670 PF00586 AIR synthase related protein, N-terminal domain CA943_01670 PF02769 AIR synthase related protein, C-terminal domain CA943_01675 PF04608 Phosphatidylglycerophosphatase A CA943_01680 PF02464 Competence-damaged protein CA943_01685 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CA943_01690 PF01219 Prokaryotic diacylglycerol kinase CA943_01695 PF00118 TCP-1/cpn60 chaperonin family CA943_01700 PF00166 Chaperonin 10 Kd subunit CA943_01705 PF00497 Bacterial extracellular solute-binding proteins, family 3 CA943_01715 PF04314 Protein of unknown function (DUF461) CA943_01720 PF00561 alpha/beta hydrolase fold CA943_01725 PF13174 Tetratricopeptide repeat CA943_01725 PF13432 Tetratricopeptide repeat CA943_01730 PF00691 OmpA family CA943_01735 PF04052 TolB amino-terminal domain CA943_01735 PF07676 WD40-like Beta Propeller Repeat CA943_01740 PF13103 TonB C terminal CA943_01745 PF02472 Biopolymer transport protein ExbD/TolR CA943_01750 PF01618 CA943_01750 CA943_01755 PF03061 Thioesterase superfamily CA943_01760 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CA943_01760 PF03129 Anticodon binding domain CA943_01760 PF04073 Aminoacyl-tRNA editing domain CA943_01765 PF00293 NUDIX domain CA943_01770 PF01926 50S ribosome-binding GTPase CA943_01770 PF10396 GTP-binding protein TrmE N-terminus CA943_01770 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE CA943_01780 PF05164 Cell division protein ZapA CA943_01785 PF04402 Protein of unknown function (DUF541) CA943_01790 PF01790 CA943_01790 CA943_01795 PF00171 Aldehyde dehydrogenase family CA943_01795 PF01619 Proline dehydrogenase CA943_01795 PF14850 DNA-binding domain of Proline dehydrogenase CA943_01800 PF00474 Sodium:solute symporter family CA943_01805 PF04072 Leucine carboxyl methyltransferase CA943_01845 PF03895 YadA-like C-terminal region CA943_01845 PF05658 Head domain of trimeric autotransporter adhesin CA943_01845 PF05662 Coiled stalk of trimeric autotransporter adhesin CA943_01850 PF00209 Sodium:neurotransmitter symporter family CA943_01855 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CA943_01855 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CA943_01860 PF00132 Bacterial transferase hexapeptide (six repeats) CA943_01865 PF00534 Glycosyl transferases group 1 CA943_01865 PF13439 Glycosyltransferase Family 4 CA943_01870 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CA943_01875 PF01061 CA943_01875 CA943_01880 PF00005 ABC transporter CA943_01880 PF14524 Wzt C-terminal domain CA943_01885 PF00534 Glycosyl transferases group 1 CA943_01885 PF08241 Methyltransferase domain CA943_01885 PF13439 Glycosyltransferase Family 4 CA943_01890 PF01841 Transglutaminase-like superfamily CA943_01895 PF01841 Transglutaminase-like superfamily CA943_01895 PF06662 CA943_01895 CA943_01900 PF00733 Asparagine synthase CA943_01900 PF13537 Glutamine amidotransferase domain CA943_01910 PF02350 UDP-N-acetylglucosamine 2-epimerase CA943_01915 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CA943_01920 PF02397 CA943_01920 CA943_01925 PF13440 CA943_01925 CA943_01935 PF01757 CA943_01935 CA943_01940 PF02719 Polysaccharide biosynthesis protein CA943_01940 PF13727 CoA-binding domain CA943_01945 PF03971 Monomeric isocitrate dehydrogenase CA943_01950 PF02201 SWIB/MDM2 domain CA943_01955 PF01979 Amidohydrolase family CA943_01960 PF01596 O-methyltransferase CA943_01965 PF05681 CA943_01965 CA943_01965 PF05683 Fumarase C-terminus CA943_01970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CA943_01975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CA943_01980 PF00528 Binding-protein-dependent transport system inner membrane component CA943_01985 PF00528 Binding-protein-dependent transport system inner membrane component CA943_01985 PF12911 CA943_01985 CA943_01990 PF00005 ABC transporter CA943_01990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CA943_01995 PF00005 ABC transporter CA943_01995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CA943_02000 PF08240 Alcohol dehydrogenase GroES-like domain CA943_02000 PF13602 Zinc-binding dehydrogenase CA943_02005 PF13508 Acetyltransferase (GNAT) domain CA943_02010 PF00121 Triosephosphate isomerase CA943_02015 PF03840 Preprotein translocase SecG subunit CA943_02025 PF08972 Domain of unknown function (DUF1902) CA943_02030 PF07681 CA943_02030 CA943_02035 PF00127 Copper binding proteins, plastocyanin/azurin family CA943_02040 PF13609 Gram-negative porin CA943_02045 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CA943_02050 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CA943_02055 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CA943_02060 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CA943_02065 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin CA943_02070 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CA943_02070 PF10531 SLBB domain CA943_02070 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CA943_02075 PF00384 Molybdopterin oxidoreductase CA943_02075 PF01568 Molydopterin dinucleotide binding domain CA943_02075 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CA943_02075 PF13510 2Fe-2S iron-sulfur cluster binding domain CA943_02080 PF00146 NADH dehydrogenase CA943_02085 PF12838 4Fe-4S dicluster domain CA943_02090 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CA943_02095 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CA943_02100 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CA943_02100 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CA943_02105 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CA943_02110 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CA943_02115 PF10993 CA943_02115 CA943_02120 PF12710 haloacid dehalogenase-like hydrolase CA943_02125 PF00270 DEAD/DEAH box helicase CA943_02125 PF00271 Helicase conserved C-terminal domain CA943_02125 PF02559 CarD-like/TRCF domain CA943_02125 PF03461 TRCF domain CA943_02130 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CA943_02130 PF02542 YgbB family CA943_02135 PF02627 Carboxymuconolactone decarboxylase family CA943_02140 PF00578 AhpC/TSA family CA943_02145 PF00512 His Kinase A (phospho-acceptor) domain CA943_02145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA943_02145 PF16524 CA943_02145 CA943_02150 PF00072 Response regulator receiver domain CA943_02150 PF00486 Transcriptional regulatory protein, C terminal CA943_02155 PF00583 Acetyltransferase (GNAT) family CA943_02155 PF00814 Glycoprotease family CA943_02160 PF03167 Uracil DNA glycosylase superfamily CA943_02165 PF07690 Major Facilitator Superfamily CA943_02170 PF02463 RecF/RecN/SMC N terminal domain CA943_02175 PF04354 ZipA, C-terminal FtsZ-binding domain CA943_02180 PF00533 BRCA1 C Terminus (BRCT) domain CA943_02180 PF01653 NAD-dependent DNA ligase adenylation domain CA943_02180 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CA943_02180 PF03120 NAD-dependent DNA ligase OB-fold domain CA943_02180 PF12826 Helix-hairpin-helix motif CA943_02185 PF00639 PPIC-type PPIASE domain CA943_02190 PF01722 BolA-like protein CA943_02195 PF04279 CA943_02195 CA943_02200 PF13458 Periplasmic binding protein CA943_02205 PF13458 Periplasmic binding protein CA943_02210 PF13458 Periplasmic binding protein CA943_02215 PF02653 CA943_02215 CA943_02220 PF00005 ABC transporter CA943_02220 PF02653 CA943_02220 CA943_02220 PF12399 Branched-chain amino acid ATP-binding cassette transporter CA943_02225 PF00005 ABC transporter CA943_02230 PF00633 Helix-hairpin-helix motif CA943_02230 PF00730 HhH-GPD superfamily base excision DNA repair protein CA943_02235 PF04060 Putative Fe-S cluster CA943_02235 PF14697 4Fe-4S dicluster domain CA943_02240 PF00175 Oxidoreductase NAD-binding domain CA943_02245 PF00037 4Fe-4S binding domain CA943_02245 PF11953 Domain of unknown function (DUF3470) CA943_02245 PF12800 4Fe-4S binding domain CA943_02250 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CA943_02255 PF02824 TGS domain CA943_02255 PF04607 Region found in RelA / SpoT proteins CA943_02255 PF13291 ACT domain CA943_02255 PF13328 HD domain CA943_02260 PF01039 Carboxyl transferase domain CA943_02265 PF00575 S1 RNA binding domain CA943_02265 PF10150 Ribonuclease E/G family CA943_02270 PF00849 RNA pseudouridylate synthase CA943_02270 PF01479 S4 domain CA943_02275 PF13419 Haloacid dehalogenase-like hydrolase CA943_02285 PF02545 Maf-like protein CA943_02290 PF02620 CA943_02290 CA943_02295 PF01783 Ribosomal L32p protein family CA943_02300 PF02504 Fatty acid synthesis protein CA943_02305 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CA943_02305 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CA943_02310 PF00698 Acyl transferase domain CA943_02315 PF13561 Enoyl-(Acyl carrier protein) reductase CA943_02320 PF00550 Phosphopantetheine attachment site CA943_02325 PF00109 Beta-ketoacyl synthase, N-terminal domain CA943_02325 PF02801 Beta-ketoacyl synthase, C-terminal domain CA943_02335 PF13180 PDZ domain CA943_02335 PF13365 Trypsin-like peptidase domain CA943_02340 PF00009 Elongation factor Tu GTP binding domain CA943_02340 PF00679 Elongation factor G C-terminus CA943_02340 PF03144 Elongation factor Tu domain 2 CA943_02340 PF06421 GTP-binding protein LepA C-terminus CA943_02345 PF00717 Peptidase S24-like CA943_02345 PF10502 Signal peptidase, peptidase S26 CA943_02350 PF00035 Double-stranded RNA binding motif CA943_02350 PF14622 Ribonuclease-III-like CA943_02355 PF01926 50S ribosome-binding GTPase CA943_02355 PF07650 KH domain CA943_02360 PF02565 Recombination protein O C terminal CA943_02360 PF11967 Recombination protein O N terminal CA943_02365 PF01027 Inhibitor of apoptosis-promoting Bax1 CA943_02365 PF05684 CA943_02365 CA943_02370 PF04364 DNA polymerase III chi subunit, HolC CA943_02375 PF00883 Cytosol aminopeptidase family, catalytic domain CA943_02380 PF03739 CA943_02380 CA943_02385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CA943_02385 PF03466 LysR substrate binding domain CA943_02390 PF00440 Bacterial regulatory proteins, tetR family CA943_02395 PF10087 CA943_02395 CA943_02400 PF00877 NlpC/P60 family CA943_02405 PF01946 Thi4 family CA943_02405 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase CA943_02410 PF00557 Metallopeptidase family M24 CA943_02410 PF01321 Creatinase/Prolidase N-terminal domain CA943_02410 PF16188 CA943_02410 CA943_02410 PF16189 CA943_02410 CA943_02420 PF00471 Ribosomal protein L33 CA943_02425 PF00830 Ribosomal L28 family CA943_02430 PF01554 MatE CA943_02440 PF01197 Ribosomal protein L31 CA943_02445 PF04002 RadC-like JAB domain CA943_02450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CA943_02455 PF02401 LytB protein CA943_02460 PF02545 Maf-like protein CA943_02465 PF02590 Predicted SPOUT methyltransferase CA943_02470 PF02410 Oligomerisation domain CA943_02475 PF01467 Cytidylyltransferase CA943_02480 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CA943_02480 PF02843 Phosphoribosylglycinamide synthetase, C domain CA943_02480 PF02844 Phosphoribosylglycinamide synthetase, N domain CA943_02485 PF01709 Transcriptional regulator CA943_02490 PF05872 CA943_02490 CA943_02495 PF00316 Fructose-1-6-bisphosphatase CA943_02500 PF01433 Peptidase family M1 CA943_02500 PF11940 Domain of unknown function (DUF3458) CA943_02500 PF17432 CA943_02500 CA943_02505 PF01523 Putative modulator of DNA gyrase CA943_02510 PF03054 tRNA methyl transferase CA943_02515 PF00206 Lyase CA943_02515 PF08328 Adenylosuccinate lyase C-terminal CA943_02520 PF01322 Cytochrome C' CA943_02540 PF01645 Conserved region in glutamate synthase CA943_02550 PF00545 ribonuclease CA943_02555 PF01337 Barstar (barnase inhibitor) CA943_02565 PF00005 ABC transporter CA943_02565 PF12848 ABC transporter CA943_02565 PF16326 CA943_02565 CA943_02570 PF01471 Putative peptidoglycan binding domain CA943_02570 PF13406 Transglycosylase SLT domain CA943_02575 PF00595 PDZ domain (Also known as DHR or GLGF) CA943_02575 PF03572 Peptidase family S41 CA943_02575 PF11818 CA943_02575 CA943_02595 PF13489 Methyltransferase domain CA943_02600 PF00691 OmpA family CA943_02605 PF00521 DNA gyrase/topoisomerase IV, subunit A CA943_02605 PF03989 DNA gyrase C-terminal domain, beta-propeller CA943_02610 PF00266 Aminotransferase class-V CA943_02615 PF00800 Prephenate dehydratase CA943_02615 PF01817 Chorismate mutase type II CA943_02620 PF02153 Prephenate dehydrogenase CA943_02625 PF02224 Cytidylate kinase CA943_02630 PF00575 S1 RNA binding domain CA943_02635 PF00216 Bacterial DNA-binding protein CA943_02640 PF06305 CA943_02640 CA943_02650 PF00294 pfkB family carbohydrate kinase CA943_02655 PF12836 Helix-hairpin-helix motif CA943_02660 PF00122 E1-E2 ATPase CA943_02665 PF03597 CA943_02665 CA943_02670 PF00115 Cytochrome C and Quinol oxidase polypeptide I CA943_02675 PF02433 Cytochrome C oxidase, mono-heme subunit/FixO CA943_02680 PF05545 CA943_02680 CA943_02685 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CA943_02685 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CA943_02690 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CA943_02690 PF12801 CA943_02690 CA943_02690 PF13746 4Fe-4S dicluster domain CA943_02695 PF05751 CA943_02695 CA943_02700 PF00027 Cyclic nucleotide-binding domain CA943_02700 PF13545 Crp-like helix-turn-helix domain CA943_02705 PF07811 CA943_02705 CA943_02710 PF01430 Hsp33 protein CA943_02715 PF00132 Bacterial transferase hexapeptide (six repeats) CA943_02720 PF00501 AMP-binding enzyme CA943_02725 PF06271 CA943_02725 CA943_02730 PF01170 Putative RNA methylase family UPF0020 CA943_02730 PF02926 THUMP domain CA943_02735 PF03653 CA943_02735 CA943_02740 PF06144 DNA polymerase III, delta subunit CA943_02745 PF04390 Lipopolysaccharide-assembly CA943_02750 PF00133 tRNA synthetases class I (I, L, M and V) CA943_02750 PF08264 Anticodon-binding domain of tRNA CA943_02750 PF09334 tRNA synthetases class I (M) CA943_02750 PF13603 Leucyl-tRNA synthetase, Domain 2 CA943_02755 PF01546 Peptidase family M20/M25/M40 CA943_02760 PF08007 Cupin superfamily protein CA943_02765 PF00488 MutS domain V CA943_02765 PF01624 MutS domain I CA943_02765 PF05188 MutS domain II CA943_02765 PF05190 MutS family domain IV CA943_02765 PF05192 MutS domain III CA943_02770 PF00924 Mechanosensitive ion channel CA943_02770 PF05552 Conserved TM helix CA943_02775 PF00588 SpoU rRNA Methylase family CA943_02780 PF00459 Inositol monophosphatase family CA943_02785 PF02673 CA943_02785 CA943_02790 PF00149 Calcineurin-like phosphoesterase CA943_02795 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CA943_02800 PF00515 Tetratricopeptide repeat CA943_02800 PF13174 Tetratricopeptide repeat CA943_02805 PF01406 tRNA synthetases class I (C) catalytic domain CA943_02805 PF09190 DALR domain CA943_02810 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CA943_02815 PF01171 PP-loop family CA943_02815 PF09179 TilS substrate binding domain CA943_02825 PF05154 CA943_02825 CA943_02830 PF16868 CA943_02830 CA943_02835 PF08905 CA943_02835 CA943_02840 PF06808 CA943_02840 CA943_02850 PF00005 ABC transporter CA943_02850 PF06472 CA943_02850 CA943_02855 PF00593 TonB dependent receptor CA943_02855 PF07715 TonB-dependent Receptor Plug Domain CA943_02860 PF00696 Amino acid kinase family CA943_02860 PF01842 ACT domain CA943_02860 PF13840 ACT domain CA943_02865 PF06676 CA943_02865 CA943_02870 PF04461 Protein of unknown function (DUF520) CA943_02875 PF01132 Elongation factor P (EF-P) OB domain CA943_02875 PF08207 Elongation factor P (EF-P) KOW-like domain CA943_02875 PF09285 Elongation factor P, C-terminal CA943_02880 PF10093 CA943_02880 CA943_02885 PF00155 Aminotransferase class I and II CA943_02890 PF00330 Aconitase family (aconitate hydratase) CA943_02890 PF06434 Aconitate hydratase 2 N-terminus CA943_02890 PF11791 Aconitate B N-terminal domain CA943_02905 PF00579 tRNA synthetases class I (W and Y) CA943_02910 PF01427 D-ala-D-ala dipeptidase CA943_02915 PF01569 PAP2 superfamily CA943_02920 PF13528 Glycosyl transferase family 1 CA943_02925 PF01964 ThiC family CA943_02925 PF13667 ThiC-associated domain CA943_02935 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CA943_02935 PF07497 Rho termination factor, RNA-binding domain CA943_02935 PF07498 Rho termination factor, N-terminal domain CA943_02940 PF00085 Thioredoxin CA943_02945 PF00204 DNA gyrase B CA943_02945 PF00986 DNA gyrase B subunit, carboxyl terminus CA943_02945 PF01751 Toprim domain CA943_02945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA943_02950 PF00521 DNA gyrase/topoisomerase IV, subunit A CA943_02955 PF00111 2Fe-2S iron-sulfur cluster binding domain CA943_02955 PF00175 Oxidoreductase NAD-binding domain CA943_02955 PF00970 Oxidoreductase FAD-binding domain CA943_02960 PF03524 Conjugal transfer protein CA943_02965 PF01411 tRNA synthetases class II (A) CA943_02965 PF02272 DHHA1 domain CA943_02965 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CA943_02970 PF01206 Sulfurtransferase TusA CA943_02975 PF00886 Ribosomal protein S16 CA943_02980 PF01782 RimM N-terminal domain CA943_02985 PF01746 tRNA (Guanine-1)-methyltransferase CA943_02990 PF01451 Low molecular weight phosphotyrosine protein phosphatase CA943_02995 PF02082 Transcriptional regulator CA943_03000 PF00266 Aminotransferase class-V CA943_03005 PF01592 NifU-like N terminal domain CA943_03010 PF01521 Iron-sulphur cluster biosynthesis CA943_03015 PF07743 HSCB C-terminal oligomerisation domain CA943_03020 PF00012 Hsp70 protein CA943_03025 PF00111 2Fe-2S iron-sulfur cluster binding domain CA943_03030 PF08238 Sel1 repeat CA943_03035 PF08238 Sel1 repeat CA943_03045 PF08238 Sel1 repeat CA943_03050 PF08238 Sel1 repeat CA943_03055 PF00152 tRNA synthetases class II (D, K and N) CA943_03055 PF01336 OB-fold nucleic acid binding domain CA943_03065 PF01368 DHH family CA943_03065 PF02272 DHHA1 domain CA943_03075 PF02687 CA943_03075 CA943_03075 PF12704 MacB-like periplasmic core domain CA943_03080 PF00005 ABC transporter CA943_03085 PF01494 FAD binding domain CA943_03090 PF01026 TatD related DNase CA943_03095 PF00753 Metallo-beta-lactamase superfamily CA943_03095 PF03772 CA943_03095 CA943_03095 PF13567 CA943_03095 CA943_03100 PF02811 PHP domain CA943_03105 PF01272 Transcription elongation factor, GreA/GreB, C-term CA943_03105 PF03449 Transcription elongation factor, N-terminal CA943_03110 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ CA943_03115 PF13145 PPIC-type PPIASE domain CA943_03115 PF13624 SurA N-terminal domain CA943_03120 PF01632 Ribosomal protein L35 CA943_03125 PF00453 Ribosomal protein L20 CA943_03130 PF01409 tRNA synthetases class II core domain (F) CA943_03130 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CA943_03135 PF01588 Putative tRNA binding domain CA943_03135 PF03147 Ferredoxin-fold anticodon binding domain CA943_03135 PF03483 B3/4 domain CA943_03135 PF03484 tRNA synthetase B5 domain CA943_03140 PF00216 Bacterial DNA-binding protein CA943_03145 PF13411 MerR HTH family regulatory protein CA943_03150 PF01177 Asp/Glu/Hydantoin racemase CA943_03155 PF01070 FMN-dependent dehydrogenase CA943_03160 PF00291 Pyridoxal-phosphate dependent enzyme CA943_03170 PF00580 UvrD/REP helicase N-terminal domain CA943_03170 PF13361 UvrD-like helicase C-terminal domain CA943_03175 PF09424 Yqey-like protein CA943_03185 PF00768 D-alanyl-D-alanine carboxypeptidase CA943_03190 PF02769 AIR synthase related protein, C-terminal domain CA943_03190 PF13507 CobB/CobQ-like glutamine amidotransferase domain CA943_03195 PF00478 IMP dehydrogenase / GMP reductase domain CA943_03195 PF00571 CBS domain CA943_03200 PF05940 CA943_03200 CA943_03205 PF00117 Glutamine amidotransferase class-I CA943_03205 PF00958 GMP synthase C terminal domain CA943_03205 PF02540 NAD synthase CA943_03210 PF13749 ATP-dependent DNA helicase recG C-terminal CA943_03215 PF16868 CA943_03215 CA943_03220 PF08238 Sel1 repeat CA943_03225 PF12643 CA943_03225 CA943_03230 PF09848 Uncharacterized conserved protein (DUF2075) CA943_03240 PF00474 Sodium:solute symporter family CA943_03250 PF03806 CA943_03250 CA943_03255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CA943_03260 PF00857 Isochorismatase family CA943_03265 PF07690 Major Facilitator Superfamily CA943_03270 PF05940 CA943_03270 CA943_03275 PF00005 ABC transporter CA943_03280 PF00528 Binding-protein-dependent transport system inner membrane component CA943_03290 PF00593 TonB dependent receptor CA943_03290 PF07715 TonB-dependent Receptor Plug Domain CA943_03300 PF04575 CA943_03300 CA943_03305 PF00005 ABC transporter CA943_03305 PF00664 ABC transporter transmembrane region CA943_03310 PF00005 ABC transporter CA943_03310 PF00664 ABC transporter transmembrane region CA943_03315 PF03616 CA943_03315 CA943_03320 PF00390 Malic enzyme, N-terminal domain CA943_03320 PF01515 Phosphate acetyl/butaryl transferase CA943_03320 PF03949 Malic enzyme, NAD binding domain CA943_03325 PF00676 Dehydrogenase E1 component CA943_03325 PF02779 Transketolase, pyrimidine binding domain CA943_03325 PF16078 CA943_03325 CA943_03325 PF16870 CA943_03325 CA943_03330 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CA943_03330 PF00364 Biotin-requiring enzyme CA943_03330 PF02817 e3 binding domain CA943_03335 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CA943_03335 PF07992 Pyridine nucleotide-disulphide oxidoreductase CA943_03340 PF03969 AFG1-like ATPase CA943_03345 PF01078 Magnesium chelatase, subunit ChlI CA943_03345 PF13335 CA943_03345 CA943_03345 PF13541 Subunit ChlI of Mg-chelatase CA943_03350 PF03180 NLPA lipoprotein CA943_03360 PF02824 TGS domain CA943_03360 PF04607 Region found in RelA / SpoT proteins CA943_03360 PF13291 ACT domain CA943_03360 PF13328 HD domain CA943_03365 PF01192 RNA polymerase Rpb6 CA943_03370 PF00625 Guanylate kinase CA943_03375 PF02562 PhoH-like protein CA943_03375 PF13638 PIN domain CA943_03380 PF00578 AhpC/TSA family CA943_03385 PF04430 Protein of unknown function (DUF498/DUF598) CA943_03390 PF00742 Homoserine dehydrogenase CA943_03390 PF01842 ACT domain CA943_03390 PF03447 Homoserine dehydrogenase, NAD binding domain CA943_03395 PF14821 Threonine synthase N terminus CA943_03400 PF00494 Squalene/phytoene synthase CA943_03405 PF00842 Alanine racemase, C-terminal domain CA943_03405 PF01168 Alanine racemase, N-terminal domain CA943_03410 PF13481 AAA domain CA943_03410 PF13541 Subunit ChlI of Mg-chelatase CA943_03415 PF13416 Bacterial extracellular solute-binding protein CA943_03420 PF00005 ABC transporter CA943_03420 PF08402 TOBE domain CA943_03425 PF00528 Binding-protein-dependent transport system inner membrane component CA943_03430 PF00528 Binding-protein-dependent transport system inner membrane component CA943_03435 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CA943_03440 PF01895 PhoU domain CA943_03445 PF04362 Bacterial Fe(2+) trafficking CA943_03455 PF02811 PHP domain CA943_03455 PF07733 Bacterial DNA polymerase III alpha subunit CA943_03455 PF14579 Helix-hairpin-helix motif CA943_03460 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CA943_03465 PF00005 ABC transporter CA943_03465 PF00664 ABC transporter transmembrane region CA943_03470 PF10150 Ribonuclease E/G family CA943_03475 PF01227 GTP cyclohydrolase I CA943_03505 PF00565 Staphylococcal nuclease homologue CA943_03510 PF00881 Nitroreductase family CA943_03515 PF03544 Gram-negative bacterial TonB protein C-terminal CA943_03520 PF01618 CA943_03520 CA943_03525 PF02472 Biopolymer transport protein ExbD/TolR CA943_03530 PF05154 CA943_03530 CA943_03535 PF04305 CA943_03535 CA943_03540 PF00005 ABC transporter CA943_03540 PF06472 CA943_03540 CA943_03545 PF13673 Acetyltransferase (GNAT) domain CA943_03550 PF04247 CA943_03550 CA943_03555 PF01925 CA943_03555 CA943_03560 PF00575 S1 RNA binding domain CA943_03560 PF00773 RNB domain CA943_03560 PF08206 Ribonuclease B OB domain CA943_03565 PF00588 SpoU rRNA Methylase family CA943_03565 PF08032 RNA 2'-O ribose methyltransferase substrate binding CA943_03570 PF01053 Cys/Met metabolism PLP-dependent enzyme CA943_03575 PF00216 Bacterial DNA-binding protein CA943_03580 PF13437 HlyD family secretion protein CA943_03580 PF13533 Biotin-lipoyl like CA943_03585 PF00005 ABC transporter CA943_03585 PF12698 ABC-2 family transporter protein CA943_03590 PF12698 ABC-2 family transporter protein CA943_03595 PF02321 Outer membrane efflux protein CA943_03605 PF00764 Arginosuccinate synthase CA943_03610 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CA943_03610 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CA943_03615 PF12112 Protein of unknown function (DUF3579) CA943_03620 PF01649 Ribosomal protein S20 CA943_03625 PF03023 CA943_03625 CA943_03630 PF00406 Adenylate kinase CA943_03630 PF05191 Adenylate kinase, active site lid CA943_03635 PF02348 Cytidylyltransferase CA943_03640 PF03966 Trm112p-like protein CA943_03645 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CA943_03650 PF02601 CA943_03650 CA943_03650 PF13742 CA943_03650 CA943_03655 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CA943_03655 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CA943_03660 PF13458 Periplasmic binding protein CA943_03665 PF03807 NADP oxidoreductase coenzyme F420-dependent CA943_03665 PF14748 Pyrroline-5-carboxylate reductase dimerisation CA943_03670 PF02653 CA943_03670 CA943_03675 PF02653 CA943_03675 CA943_03675 PF11862 CA943_03675 CA943_03680 PF00005 ABC transporter CA943_03680 PF12399 Branched-chain amino acid ATP-binding cassette transporter CA943_03685 PF00005 ABC transporter CA943_03690 PF02630 SCO1/SenC CA943_03695 PF01432 Peptidase family M3 CA943_03700 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CA943_03700 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CA943_03705 PF00072 Response regulator receiver domain CA943_03705 PF00196 Bacterial regulatory proteins, luxR family CA943_03710 PF00512 His Kinase A (phospho-acceptor) domain CA943_03710 PF00989 PAS fold CA943_03710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA943_03710 PF13188 PAS domain CA943_03715 PF00456 Transketolase, thiamine diphosphate binding domain CA943_03720 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CA943_03720 PF00364 Biotin-requiring enzyme CA943_03720 PF02817 e3 binding domain CA943_03725 PF00364 Biotin-requiring enzyme CA943_03725 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CA943_03725 PF07992 Pyridine nucleotide-disulphide oxidoreductase CA943_03730 PF01292 Prokaryotic cytochrome b561 CA943_03735 PF08245 Mur ligase middle domain CA943_03740 PF05036 Sporulation related domain CA943_03745 PF02674 CA943_03745 CA943_03750 PF00156 Phosphoribosyl transferase domain CA943_03750 PF13537 Glutamine amidotransferase domain CA943_03755 PF02423 Ornithine cyclodeaminase/mu-crystallin family CA943_03760 PF02600 Disulfide bond formation protein DsbB CA943_03765 PF01914 CA943_03765 CA943_03770 PF01966 HD domain CA943_03770 PF08335 GlnD PII-uridylyltransferase CA943_03775 PF00557 Metallopeptidase family M24 CA943_03780 PF00318 Ribosomal protein S2 CA943_03785 PF00889 Elongation factor TS CA943_03790 PF00696 Amino acid kinase family CA943_03795 PF01765 Ribosome recycling factor CA943_03800 PF01255 Putative undecaprenyl diphosphate synthase CA943_03805 PF01148 Cytidylyltransferase family CA943_03810 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CA943_03810 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal CA943_03810 PF13288 DXP reductoisomerase C-terminal domain CA943_03815 PF02163 Peptidase family M50 CA943_03815 PF13180 PDZ domain CA943_03820 PF01103 Surface antigen CA943_03820 PF07244 Surface antigen variable number repeat CA943_03825 PF03938 Outer membrane protein (OmpH-like) CA943_03830 PF00132 Bacterial transferase hexapeptide (six repeats) CA943_03830 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CA943_03835 PF07977 FabA-like domain CA943_03840 PF00132 Bacterial transferase hexapeptide (six repeats) CA943_03840 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CA943_03845 PF02684 CA943_03845 CA943_03850 PF01351 Ribonuclease HII CA943_03855 PF00487 CA943_03855 CA943_03860 PF00588 SpoU rRNA Methylase family CA943_03865 PF03618 CA943_03865 CA943_03870 PF00391 PEP-utilising enzyme, mobile domain CA943_03870 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CA943_03870 PF02896 PEP-utilising enzyme, TIM barrel domain CA943_03875 PF01957 NfeD-like C-terminal, partner-binding CA943_03880 PF01145 SPFH domain / Band 7 family CA943_03880 PF16200 CA943_03880 CA943_03885 PF01668 SmpB protein CA943_03890 PF03364 Polyketide cyclase / dehydrase and lipid transport CA943_03895 PF03658 RnfH family Ubiquitin CA943_03905 PF02618 YceG-like family CA943_03910 PF02223 Thymidylate kinase CA943_03915 PF13177 DNA polymerase III, delta subunit CA943_03920 PF01026 TatD related DNase CA943_03925 PF12796 Ankyrin repeats (3 copies) CA943_03930 PF03334 CA943_03930 CA943_03935 PF04066 CA943_03935 CA943_03940 PF01899 CA943_03940 CA943_03945 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CA943_03950 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CA943_03955 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CA943_03955 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CA943_03955 PF04039 CA943_03955 CA943_03955 PF13244 CA943_03955 CA943_03965 PF16576 CA943_03965 CA943_03970 PF00873 AcrB/AcrD/AcrF family CA943_03975 PF02321 Outer membrane efflux protein CA943_03980 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CA943_03985 PF00881 Nitroreductase family CA943_03990 PF00171 Aldehyde dehydrogenase family CA943_03995 PF02321 Outer membrane efflux protein CA943_04000 PF00873 AcrB/AcrD/AcrF family CA943_04005 PF00873 AcrB/AcrD/AcrF family CA943_04010 PF13437 HlyD family secretion protein CA943_04010 PF13533 Biotin-lipoyl like CA943_04015 PF00892 EamA-like transporter family CA943_04025 PF03401 Tripartite tricarboxylate transporter family receptor CA943_04035 PF03372 Endonuclease/Exonuclease/phosphatase family CA943_04045 PF00849 RNA pseudouridylate synthase CA943_04045 PF01479 S4 domain CA943_04050 PF00543 Nitrogen regulatory protein P-II CA943_04055 PF02540 NAD synthase CA943_04060 PF00206 Lyase CA943_04060 PF14698 Argininosuccinate lyase C-terminal CA943_04065 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CA943_04070 PF02631 RecX family CA943_04075 PF00154 recA bacterial DNA recombination protein CA943_04090 PF00271 Helicase conserved C-terminal domain CA943_04090 PF02151 UvrB/uvrC motif CA943_04090 PF04851 Type III restriction enzyme, res subunit CA943_04090 PF12344 Ultra-violet resistance protein B CA943_04095 PF00155 Aminotransferase class I and II CA943_04100 PF00717 Peptidase S24-like CA943_04100 PF01726 LexA DNA binding domain CA943_04105 PF06808 CA943_04105 CA943_04105 PF11874 CA943_04105 CA943_04110 PF16868 CA943_04110 CA943_04120 PF01594 CA943_04120 CA943_04145 PF00132 Bacterial transferase hexapeptide (six repeats) CA943_04145 PF14602 Hexapeptide repeat of succinyl-transferase CA943_04145 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CA943_04150 PF01546 Peptidase family M20/M25/M40 CA943_04150 PF07687 Peptidase dimerisation domain CA943_04155 PF05175 Methyltransferase small domain CA943_04160 PF00005 ABC transporter CA943_04160 PF12848 ABC transporter CA943_04165 PF00005 ABC transporter CA943_04170 PF02653 CA943_04170 CA943_04175 PF04392 ABC transporter substrate binding protein CA943_04180 PF01416 tRNA pseudouridine synthase CA943_04185 PF01118 Semialdehyde dehydrogenase, NAD binding domain CA943_04185 PF02774 Semialdehyde dehydrogenase, dimerisation domain CA943_04190 PF00180 Isocitrate/isopropylmalate dehydrogenase CA943_04195 PF00694 Aconitase C-terminal domain CA943_04200 PF00330 Aconitase family (aconitate hydratase) CA943_04205 PF09842 CA943_04205 CA943_04210 PF03631 CA943_04210 CA943_04215 PF00111 2Fe-2S iron-sulfur cluster binding domain CA943_04220 PF00268 Ribonucleotide reductase, small chain CA943_04225 PF00317 Ribonucleotide reductase, all-alpha domain CA943_04225 PF02867 Ribonucleotide reductase, barrel domain CA943_04225 PF03477 ATP cone domain CA943_04230 PF01207 Dihydrouridine synthase (Dus) CA943_04235 PF00571 CBS domain CA943_04235 PF00654 Voltage gated chloride channel CA943_04240 PF01636 Phosphotransferase enzyme family CA943_04250 PF00766 Electron transfer flavoprotein FAD-binding domain CA943_04250 PF01012 Electron transfer flavoprotein domain CA943_04255 PF01012 Electron transfer flavoprotein domain CA943_04260 PF01066 CDP-alcohol phosphatidyltransferase CA943_04265 PF01541 GIY-YIG catalytic domain CA943_04265 PF02151 UvrB/uvrC motif CA943_04265 PF08459 UvrC Helix-hairpin-helix N-terminal CA943_04265 PF14520 Helix-hairpin-helix domain CA943_04270 PF00933 Glycosyl hydrolase family 3 N terminal domain CA943_04275 PF01648 4'-phosphopantetheinyl transferase superfamily CA943_04280 PF00929 Exonuclease CA943_04285 PF03193 Protein of unknown function, DUF258 CA943_04290 PF01245 Ribosomal protein L19 CA943_04295 PF02643 Uncharacterized ACR, COG1430 CA943_04300 PF00482 Type II secretion system (T2SS), protein F CA943_04305 PF00482 Type II secretion system (T2SS), protein F CA943_04310 PF00437 Type II/IV secretion system protein CA943_04310 PF00498 FHA domain CA943_04315 PF00263 CA943_04315 CA943_04315 PF13629 CA943_04315 CA943_04320 PF08666 SAF domain CA943_04320 PF16976 CA943_04320 CA943_04335 PF13400 CA943_04335 CA943_04345 PF03167 Uracil DNA glycosylase superfamily CA943_04355 PF08238 Sel1 repeat CA943_04360 PF00140 Sigma-70 factor, region 1 CA943_04360 PF03979 Sigma-70 factor, region 1 CA943_04360 PF04539 Sigma-70 region 3 CA943_04360 PF04542 Sigma-70 region 2 CA943_04360 PF04545 Sigma-70, region 4 CA943_04360 PF04546 Sigma-70, non-essential region CA943_04365 PF01807 CHC2 zinc finger CA943_04365 PF08275 DNA primase catalytic core, N-terminal domain CA943_04365 PF10410 DnaB-helicase binding domain of primase CA943_04365 PF13155 Toprim-like CA943_04370 PF01165 Ribosomal protein S21 CA943_04375 PF00156 Phosphoribosyl transferase domain CA943_04380 PF00709 Adenylosuccinate synthetase CA943_04385 PF01145 SPFH domain / Band 7 family CA943_04390 PF01145 SPFH domain / Band 7 family CA943_04390 PF12221 CA943_04390 CA943_04395 PF01926 50S ribosome-binding GTPase CA943_04395 PF13167 CA943_04395 CA943_04395 PF16360 CA943_04395 CA943_04400 PF17209 CA943_04400 CA943_04405 PF01926 50S ribosome-binding GTPase CA943_04405 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CA943_04410 PF13360 PQQ-like domain CA943_04415 PF09976 Tetratricopeptide repeat CA943_04420 PF03129 Anticodon binding domain CA943_04420 PF13393 Histidyl-tRNA synthetase CA943_04425 PF04551 GcpE protein CA943_04430 PF13413 Helix-turn-helix domain CA943_04435 PF04055 Radical SAM superfamily CA943_04435 PF13394 4Fe-4S single cluster domain CA943_04440 PF00334 Nucleoside diphosphate kinase CA943_04445 PF00133 tRNA synthetases class I (I, L, M and V) CA943_04445 PF08264 Anticodon-binding domain of tRNA CA943_04445 PF10458 Valyl tRNA synthetase tRNA binding arm CA943_04450 PF17274 CA943_04450 CA943_04455 PF00719 Inorganic pyrophosphatase CA943_04460 PF07219 CA943_04460 CA943_04465 PF04375 CA943_04465 CA943_04470 PF02602 Uroporphyrinogen-III synthase HemD CA943_04475 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CA943_04475 PF03900 Porphobilinogen deaminase, C-terminal domain CA943_04480 PF03741 CA943_04480 CA943_04485 PF00549 CoA-ligase CA943_04485 PF02629 CoA binding domain CA943_04490 PF00549 CoA-ligase CA943_04490 PF08442 ATP-grasp domain CA943_04495 PF11136 CA943_04495 CA943_04505 PF08713 DNA alkylation repair enzyme CA943_04510 PF05958 tRNA (Uracil-5-)-methyltransferase CA943_04520 PF01476 LysM domain CA943_04520 PF01551 Peptidase family M23 CA943_04525 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CA943_04530 PF01975 Survival protein SurE CA943_04535 PF02660 CA943_04535 CA943_04540 PF00814 Glycoprotease family CA943_04545 PF00860 Permease family CA943_04550 PF01205 Uncharacterized protein family UPF0029 CA943_04555 PF00005 ABC transporter CA943_04555 PF12848 ABC transporter CA943_04560 PF02016 LD-carboxypeptidase CA943_04565 PF14437 CA943_04565 CA943_04570 PF00145 C-5 cytosine-specific DNA methylase CA943_04580 PF00145 C-5 cytosine-specific DNA methylase CA943_04585 PF02678 Pirin CA943_04585 PF05726 Pirin C-terminal cupin domain CA943_04590 PF01047 MarR family CA943_04595 PF00593 TonB dependent receptor CA943_04595 PF07715 TonB-dependent Receptor Plug Domain CA943_04600 PF00842 Alanine racemase, C-terminal domain CA943_04600 PF01168 Alanine racemase, N-terminal domain CA943_04610 PF08238 Sel1 repeat CA943_04620 PF08238 Sel1 repeat CA943_04625 PF03992 Antibiotic biosynthesis monooxygenase CA943_04630 PF02492 CobW/HypB/UreG, nucleotide-binding domain CA943_04630 PF07683 Cobalamin synthesis protein cobW C-terminal domain CA943_04640 PF01522 Polysaccharide deacetylase CA943_04645 PF00005 ABC transporter CA943_04645 PF08402 TOBE domain CA943_04650 PF00528 Binding-protein-dependent transport system inner membrane component CA943_04655 PF13343 Bacterial extracellular solute-binding protein CA943_04675 PF00285 Citrate synthase CA943_04680 PF03937 Flavinator of succinate dehydrogenase CA943_04685 PF13085 2Fe-2S iron-sulfur cluster binding domain CA943_04685 PF13534 4Fe-4S dicluster domain CA943_04690 PF00890 FAD binding domain CA943_04690 PF02910 Fumarate reductase flavoprotein C-term CA943_04695 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CA943_04700 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CA943_04705 PF00056 lactate/malate dehydrogenase, NAD binding domain CA943_04705 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CA943_04710 PF00171 Aldehyde dehydrogenase family CA943_04715 PF01323 DSBA-like thioredoxin domain CA943_04720 PF14542 GCN5-related N-acetyl-transferase CA943_04725 PF15428 CA943_04725 CA943_04730 PF14078 CA943_04730 CA943_04735 PF15428 CA943_04735 CA943_04740 PF03527 CA943_04740 CA943_04740 PF05593 CA943_04740 CA943_04745 PF15571 CA943_04745 CA943_04750 PF03527 CA943_04750 CA943_04750 PF15653 CA943_04750 CA943_04755 PF12796 Ankyrin repeats (3 copies) CA943_04760 PF03527 CA943_04760 CA943_04760 PF05593 CA943_04760 CA943_04760 PF14410 CA943_04760 CA943_04765 PF14136 CA943_04765 CA943_04780 PF03527 CA943_04780 CA943_04780 PF05593 CA943_04780 CA943_04780 PF05954 Phage late control gene D protein (GPD) CA943_04780 PF15545 CA943_04780 CA943_04785 PF13599 Pentapeptide repeats (9 copies) CA943_04790 PF00805 Pentapeptide repeats (8 copies) CA943_04790 PF09937 CA943_04790 CA943_04790 PF13599 Pentapeptide repeats (9 copies) CA943_04795 PF05954 Phage late control gene D protein (GPD) CA943_04800 PF13665 CA943_04800 CA943_04805 PF05954 Phage late control gene D protein (GPD) CA943_04810 PF12059 CA943_04810 CA943_04815 PF04380 CA943_04815 CA943_04820 PF00004 ATPase family associated with various cellular activities (AAA) CA943_04820 PF02861 Clp amino terminal domain CA943_04820 PF07724 AAA domain (Cdc48 subfamily) CA943_04820 PF10431 C-terminal, D2-small domain, of ClpB protein CA943_04825 PF13470 CA943_04825 CA943_04830 PF04977 Septum formation initiator CA943_04835 PF00113 Enolase, C-terminal TIM barrel domain CA943_04835 PF03952 Enolase, N-terminal domain CA943_04840 PF00793 DAHP synthetase I family CA943_04845 PF00117 Glutamine amidotransferase class-I CA943_04845 PF06418 CTP synthase N-terminus CA943_04855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CA943_04855 PF03466 LysR substrate binding domain CA943_04860 PF01266 FAD dependent oxidoreductase CA943_04865 PF03553 CA943_04865 CA943_04870 PF00171 Aldehyde dehydrogenase family CA943_04875 PF02423 Ornithine cyclodeaminase/mu-crystallin family CA943_04880 PF00375 Sodium:dicarboxylate symporter family CA943_04885 PF00202 Aminotransferase class-III CA943_04890 PF07063 Domain of unknown function (DUF1338) CA943_04895 PF01471 Putative peptidoglycan binding domain CA943_04910 PF01471 Putative peptidoglycan binding domain CA943_04920 PF04325 Protein of unknown function (DUF465) CA943_04925 PF03544 Gram-negative bacterial TonB protein C-terminal CA943_04930 PF00593 TonB dependent receptor CA943_04935 PF04187 Protein of unknown function, DUF399 CA943_04955 PF00009 Elongation factor Tu GTP binding domain CA943_04955 PF00679 Elongation factor G C-terminus CA943_04955 PF03144 Elongation factor Tu domain 2 CA943_04960 PF01509 TruB family pseudouridylate synthase (N terminal domain) CA943_04960 PF16198 CA943_04960 CA943_04965 PF02033 Ribosome-binding factor A CA943_04970 PF00009 Elongation factor Tu GTP binding domain CA943_04970 PF04760 Translation initiation factor IF-2, N-terminal region CA943_04970 PF08364 CA943_04970 CA943_04970 PF11987 Translation-initiation factor 2 CA943_04975 PF00575 S1 RNA binding domain CA943_04975 PF08529 NusA N-terminal domain CA943_04975 PF13184 NusA-like KH domain CA943_04975 PF14520 Helix-hairpin-helix domain CA943_04980 PF02576 Uncharacterised BCR, YhbC family COG0779 CA943_04980 PF17384 CA943_04980 CA943_04985 PF00849 RNA pseudouridylate synthase CA943_04985 PF01479 S4 domain CA943_04990 PF04079 Putative transcriptional regulators (Ypuh-like) CA943_05000 PF00849 RNA pseudouridylate synthase CA943_05000 PF01479 S4 domain CA943_05005 PF13525 Outer membrane lipoprotein CA943_05010 PF00817 impB/mucB/samB family CA943_05010 PF11799 impB/mucB/samB family C-terminal domain CA943_05010 PF13438 CA943_05010 CA943_05015 PF00717 Peptidase S24-like CA943_05020 PF00580 UvrD/REP helicase N-terminal domain CA943_05020 PF13361 UvrD-like helicase C-terminal domain CA943_05025 PF01189 NOL1/NOP2/sun family CA943_05030 PF00551 Formyl transferase CA943_05035 PF01687 Riboflavin kinase CA943_05035 PF06574 FAD synthetase CA943_05040 PF00133 tRNA synthetases class I (I, L, M and V) CA943_05040 PF06827 Zinc finger found in FPG and IleRS CA943_05040 PF08264 Anticodon-binding domain of tRNA CA943_05045 PF01252 CA943_05045 CA943_05050 PF02441 Flavoprotein CA943_05050 PF04127 DNA / pantothenate metabolism flavoprotein CA943_05055 PF09335 CA943_05055 CA943_05060 PF00692 dUTPase CA943_05065 PF00593 TonB dependent receptor CA943_05065 PF07715 TonB-dependent Receptor Plug Domain CA943_05070 PF01298 Transferrin binding protein-like solute binding protein CA943_05070 PF17483 CA943_05070 CA943_05070 PF17484 CA943_05070 CA943_05075 PF13458 Periplasmic binding protein CA943_05080 PF00004 ATPase family associated with various cellular activities (AAA) CA943_05080 PF07724 AAA domain (Cdc48 subfamily) CA943_05080 PF10431 C-terminal, D2-small domain, of ClpB protein CA943_05085 PF00313 'Cold-shock' DNA-binding domain CA943_05090 PF02643 Uncharacterized ACR, COG1430 CA943_05095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CA943_05095 PF03466 LysR substrate binding domain CA943_05105 PF13343 Bacterial extracellular solute-binding protein CA943_05110 PF00528 Binding-protein-dependent transport system inner membrane component CA943_05115 PF00005 ABC transporter CA943_05125 PF00120 Glutamine synthetase, catalytic domain CA943_05125 PF03951 Glutamine synthetase, beta-Grasp domain CA943_05130 PF04055 Radical SAM superfamily CA943_05130 PF06969 HemN C-terminal domain CA943_05135 PF01725 Ham1 family CA943_05140 PF01138 3' exoribonuclease family, domain 1 CA943_05140 PF03725 3' exoribonuclease family, domain 2 CA943_05145 PF03755 CA943_05145 CA943_05145 PF08340 CA943_05145 CA943_05150 PF00772 DnaB-like helicase N terminal domain CA943_05150 PF03796 DnaB-like helicase C terminal domain CA943_05155 PF01281 Ribosomal protein L9, N-terminal domain CA943_05155 PF03948 Ribosomal protein L9, C-terminal domain CA943_05160 PF01084 Ribosomal protein S18 CA943_05170 PF01250 Ribosomal protein S6 CA943_05175 PF02649 Type I GTP cyclohydrolase folE2 CA943_05180 PF02779 Transketolase, pyrimidine binding domain CA943_05180 PF02780 Transketolase, C-terminal domain CA943_05180 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CA943_05185 PF00348 Polyprenyl synthetase CA943_05190 PF02609 Exonuclease VII small subunit CA943_05195 PF00355 Rieske [2Fe-2S] domain CA943_05195 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CA943_05200 PF01979 Amidohydrolase family CA943_05205 PF00221 Aromatic amino acid lyase CA943_05210 PF01175 Urocanase CA943_05210 PF17391 CA943_05210 CA943_05210 PF17392 CA943_05210 CA943_05215 PF00392 Bacterial regulatory proteins, gntR family CA943_05215 PF07702 UTRA domain CA943_05220 PF00581 Rhodanese-like domain CA943_05225 PF00892 EamA-like transporter family CA943_05230 PF01435 Peptidase family M48 CA943_05235 PF00476 DNA polymerase family A CA943_05235 PF01367 5'-3' exonuclease, C-terminal SAM fold CA943_05235 PF01612 3'-5' exonuclease CA943_05235 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CA943_05240 PF03641 Possible lysine decarboxylase CA943_05255 PF00391 PEP-utilising enzyme, mobile domain CA943_05255 PF02896 PEP-utilising enzyme, TIM barrel domain CA943_05255 PF05524 PEP-utilising enzyme, N-terminal CA943_05260 PF00381 PTS HPr component phosphorylation site CA943_05265 PF03610 PTS system fructose IIA component CA943_05270 PF00707 Translation initiation factor IF-3, C-terminal domain CA943_05270 PF05198 Translation initiation factor IF-3, N-terminal domain CA943_05275 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CA943_05275 PF02824 TGS domain CA943_05275 PF03129 Anticodon binding domain CA943_05275 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CA943_05285 PF00004 ATPase family associated with various cellular activities (AAA) CA943_05285 PF02190 ATP-dependent protease La (LON) domain CA943_05285 PF05362 Lon protease (S16) C-terminal proteolytic domain CA943_05290 PF06689 ClpX C4-type zinc finger CA943_05290 PF07724 AAA domain (Cdc48 subfamily) CA943_05290 PF10431 C-terminal, D2-small domain, of ClpB protein CA943_05295 PF00574 Clp protease CA943_05300 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CA943_05300 PF05697 Bacterial trigger factor protein (TF) CA943_05300 PF05698 Bacterial trigger factor protein (TF) C-terminus CA943_05310 PF03710 Glutamate-ammonia ligase adenylyltransferase CA943_05310 PF08335 GlnD PII-uridylyltransferase CA943_05315 PF02677 CA943_05315 CA943_05325 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CA943_05330 PF07424 CA943_05330 CA943_05340 PF01464 Transglycosylase SLT domain CA943_05350 PF05101 CA943_05350 CA943_05355 PF03135 CA943_05355 CA943_05400 PF01816 Leucine rich repeat variant CA943_05410 PF07996 Type IV secretion system proteins CA943_05415 PF04610 CA943_05415 CA943_05430 PF08401 CA943_05430 CA943_05445 PF04335 VirB8 protein CA943_05450 PF03524 Conjugal transfer protein CA943_05455 PF03743 Bacterial conjugation TrbI-like protein CA943_05475 PF00437 Type II/IV secretion system protein CA943_05480 PF02534 Type IV secretory system Conjugative DNA transfer CA943_05505 PF08707 CA943_05505 CA943_05505 PF13362 Toprim domain CA943_05515 PF05713 CA943_05515 CA943_05520 PF03432 CA943_05520 CA943_05545 PF08843 Nucleotidyl transferase of unknown function (DUF1814) CA943_05550 PF04796 CA943_05550 CA943_05555 PF01381 Helix-turn-helix CA943_05560 PF12728 Helix-turn-helix domain CA943_05565 PF00589 Phage integrase family CA943_05565 PF13356 Domain of unknown function (DUF4102) CA943_05565 PF14659 Phage integrase, N-terminal SAM-like domain CA943_05580 PF13328 HD domain CA943_05590 PF00701 Dihydrodipicolinate synthetase family CA943_05595 PF06804 NlpB/DapX lipoprotein CA943_05605 PF07520 CA943_05605 CA943_05610 PF10139 CA943_05610 CA943_05625 PF00005 ABC transporter CA943_05635 PF03781 Sulfatase-modifying factor enzyme 1 CA943_05650 PF13519 von Willebrand factor type A domain CA943_05655 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CA943_05655 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CA943_05660 PF00593 TonB dependent receptor CA943_05660 PF07715 TonB-dependent Receptor Plug Domain CA943_05665 PF00013 KH domain CA943_05665 PF00575 S1 RNA binding domain CA943_05665 PF01138 3' exoribonuclease family, domain 1 CA943_05665 PF03725 3' exoribonuclease family, domain 2 CA943_05665 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CA943_05670 PF00312 Ribosomal protein S15 CA943_05680 PF01235 CA943_05680 CA943_05685 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CA943_05685 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain CA943_05690 PF10369 Small subunit of acetolactate synthase CA943_05690 PF13710 ACT domain CA943_05695 PF00205 Thiamine pyrophosphate enzyme, central domain CA943_05695 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CA943_05695 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CA943_05700 PF03883 CA943_05700 CA943_05705 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CA943_05705 PF02403 Seryl-tRNA synthetase N-terminal domain CA943_05710 PF05496 Holliday junction DNA helicase ruvB N-terminus CA943_05710 PF12002 MgsA AAA+ ATPase C terminal CA943_05710 PF16193 CA943_05710 CA943_05715 PF03548 Outer membrane lipoprotein carrier protein LolA CA943_05720 PF01580 FtsK/SpoIIIE family CA943_05720 PF09397 Ftsk gamma domain CA943_05720 PF13491 CA943_05720 CA943_05725 PF07992 Pyridine nucleotide-disulphide oxidoreductase CA943_05730 PF01713 Smr domain CA943_05735 PF04284 CA943_05735 CA943_05740 PF08897 CA943_05740 CA943_05745 PF03601 CA943_05745 CA943_05755 PF03797 Autotransporter beta-domain CA943_05755 PF13018 CA943_05755 CA943_05760 PF00226 DnaJ domain CA943_05760 PF00684 DnaJ central domain CA943_05760 PF01556 DnaJ C terminal domain CA943_05765 PF00012 Hsp70 protein CA943_05770 PF01025 GrpE CA943_05775 PF00132 Bacterial transferase hexapeptide (six repeats) CA943_05780 PF00762 Ferrochelatase CA943_05785 PF01628 HrcA protein C terminal domain CA943_05785 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CA943_05790 PF01513 ATP-NAD kinase CA943_05795 PF02463 RecF/RecN/SMC N terminal domain CA943_05800 PF01113 Dihydrodipicolinate reductase, N-terminus CA943_05800 PF05173 Dihydrodipicolinate reductase, C-terminus CA943_05805 PF04355 SmpA / OmlA family CA943_05810 PF01475 Ferric uptake regulator family CA943_05815 PF01565 FAD binding domain CA943_05815 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CA943_05825 PF01545 Cation efflux family CA943_05835 PF00145 C-5 cytosine-specific DNA methylase CA943_05840 PF04261 Dyp-type peroxidase family CA943_05850 PF00005 ABC transporter CA943_05855 PF00528 Binding-protein-dependent transport system inner membrane component CA943_05860 PF00528 Binding-protein-dependent transport system inner membrane component CA943_05865 PF12849 PBP superfamily domain CA943_05870 PF02541 Ppx/GppA phosphatase family CA943_05875 PF13444 Acetyltransferase (GNAT) domain CA943_05880 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CA943_05880 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CA943_05880 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CA943_05880 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CA943_05885 PF00809 Pterin binding enzyme CA943_05890 PF00004 ATPase family associated with various cellular activities (AAA) CA943_05890 PF01434 Peptidase family M41 CA943_05890 PF06480 FtsH Extracellular CA943_05895 PF01728 FtsJ-like methyltransferase CA943_05900 PF01985 CRS1 / YhbY (CRM) domain CA943_05905 PF01272 Transcription elongation factor, GreA/GreB, C-term CA943_05905 PF03449 Transcription elongation factor, N-terminal CA943_05910 PF00860 Permease family CA943_05915 PF00210 Ferritin-like domain CA943_05920 PF02142 MGS-like domain CA943_05920 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CA943_05920 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CA943_05925 PF00117 Glutamine amidotransferase class-I CA943_05925 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CA943_05930 PF02132 RecR protein CA943_05930 PF13662 Toprim domain CA943_05935 PF02575 YbaB/EbfC DNA-binding family CA943_05940 PF12170 DNA polymerase III tau subunit V interacting with alpha CA943_05945 PF12169 DNA polymerase III subunits gamma and tau domain III CA943_05945 PF13177 DNA polymerase III, delta subunit CA943_05955 PF00580 UvrD/REP helicase N-terminal domain CA943_05955 PF13361 UvrD-like helicase C-terminal domain CA943_05960 PF12705 PD-(D/E)XK nuclease superfamily CA943_05970 PF04932 CA943_05970 CA943_05975 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CA943_05990 PF00589 Phage integrase family CA943_05990 PF02899 Phage integrase, N-terminal SAM-like domain CA943_05995 PF02367 Uncharacterised P-loop hydrolase UPF0079 CA943_06000 PF01520 N-acetylmuramoyl-L-alanine amidase CA943_06000 PF11741 AMIN domain CA943_06005 PF01119 DNA mismatch repair protein, C-terminal domain CA943_06005 PF08676 MutL C terminal dimerisation domain CA943_06005 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA943_06010 PF01715 IPP transferase CA943_06015 PF00586 AIR synthase related protein, N-terminal domain CA943_06015 PF02769 AIR synthase related protein, C-terminal domain CA943_06020 PF00308 Bacterial dnaA protein CA943_06025 PF01743 Poly A polymerase head domain CA943_06025 PF12626 Polymerase A arginine-rich C-terminus CA943_06025 PF12627 Probable RNA and SrmB- binding site of polymerase A CA943_06030 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CA943_06035 PF00483 Nucleotidyl transferase CA943_06040 PF00342 Phosphoglucose isomerase CA943_06045 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CA943_06050 PF00034 Cytochrome c CA943_06060 PF14113 Domain of unknown function (DUF4285) CA943_06080 PF00293 NUDIX domain CA943_06080 PF14803 Nudix N-terminal CA943_06085 PF01180 Dihydroorotate dehydrogenase CA943_06090 PF00085 Thioredoxin CA943_06095 PF00270 DEAD/DEAH box helicase CA943_06095 PF00271 Helicase conserved C-terminal domain CA943_06100 PF09678 CA943_06100 CA943_06105 PF01207 Dihydrouridine synthase (Dus) CA943_06110 PF02954 Bacterial regulatory protein, Fis family CA943_06115 PF01808 AICARFT/IMPCHase bienzyme CA943_06115 PF02142 MGS-like domain CA943_06120 PF02075 Crossover junction endodeoxyribonuclease RuvC CA943_06125 PF01330 RuvA N terminal domain CA943_06125 PF07499 RuvA, C-terminal domain CA943_06125 PF14520 Helix-hairpin-helix domain CA943_06130 PF04290 CA943_06130 CA943_06135 PF06808 CA943_06135 CA943_06140 PF05491 Holliday junction DNA helicase ruvB C-terminus CA943_06140 PF05496 Holliday junction DNA helicase ruvB N-terminus CA943_06145 PF01266 FAD dependent oxidoreductase CA943_06150 PF02597 ThiS family CA943_06155 PF05690 Thiazole biosynthesis protein ThiG CA943_06185 PF01522 Polysaccharide deacetylase CA943_06190 PF01055 Glycosyl hydrolases family 31 CA943_06195 PF01266 FAD dependent oxidoreductase CA943_06200 PF00571 CBS domain CA943_06200 PF01769 Divalent cation transporter CA943_06200 PF03448 MgtE intracellular N domain CA943_06205 PF01043 SecA preprotein cross-linking domain CA943_06205 PF02810 SEC-C motif CA943_06205 PF07516 SecA Wing and Scaffold domain CA943_06205 PF07517 SecA DEAD-like domain CA943_06210 PF01551 Peptidase family M23 CA943_06215 PF05258 CA943_06215 CA943_06220 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CA943_06225 PF00091 Tubulin/FtsZ family, GTPase domain CA943_06225 PF12327 FtsZ family, C-terminal domain CA943_06230 PF02491 SHS2 domain inserted in FTSA CA943_06230 PF14450 Cell division protein FtsA CA943_06235 PF03799 Cell division protein FtsQ CA943_06235 PF08478 POTRA domain, FtsQ-type CA943_06240 PF01820 D-ala D-ala ligase N-terminus CA943_06240 PF07478 D-ala D-ala ligase C-terminus CA943_06245 PF01225 Mur ligase family, catalytic domain CA943_06245 PF02875 Mur ligase family, glutamate ligase domain CA943_06245 PF08245 Mur ligase middle domain CA943_06250 PF03033 Glycosyltransferase family 28 N-terminal domain CA943_06250 PF04101 Glycosyltransferase family 28 C-terminal domain CA943_06255 PF01098 CA943_06255 CA943_06260 PF02875 Mur ligase family, glutamate ligase domain CA943_06260 PF08245 Mur ligase middle domain CA943_06265 PF00953 Glycosyl transferase family 4 CA943_06265 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CA943_06270 PF01225 Mur ligase family, catalytic domain CA943_06270 PF02875 Mur ligase family, glutamate ligase domain CA943_06270 PF08245 Mur ligase middle domain CA943_06275 PF00905 Penicillin binding protein transpeptidase domain CA943_06275 PF03717 Penicillin-binding Protein dimerisation domain CA943_06280 PF04999 CA943_06280 CA943_06285 PF01795 MraW methylase family CA943_06290 PF02381 MraZ protein CA943_06300 PF00199 Catalase CA943_06300 PF06628 Catalase-related immune-responsive CA943_06305 PF02091 Glycyl-tRNA synthetase alpha subunit CA943_06310 PF02092 CA943_06310 CA943_06310 PF05746 DALR anticodon binding domain CA943_06315 PF08645 Polynucleotide kinase 3 phosphatase CA943_06320 PF01553 Acyltransferase CA943_06325 PF01863 Protein of unknown function DUF45 CA943_06330 PF00398 Ribosomal RNA adenine dimethylase CA943_06335 PF00639 PPIC-type PPIASE domain CA943_06335 PF09312 SurA N-terminal domain CA943_06335 PF13616 PPIC-type PPIASE domain CA943_06340 PF04453 Organic solvent tolerance protein CA943_06345 PF01636 Phosphotransferase enzyme family CA943_06350 PF00483 Nucleotidyl transferase CA943_06360 PF00072 Response regulator receiver domain CA943_06360 PF00486 Transcriptional regulatory protein, C terminal CA943_06365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA943_06370 PF00749 tRNA synthetases class I (E and Q), catalytic domain CA943_06370 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CA943_06375 PF03775 Septum formation inhibitor MinC, C-terminal domain CA943_06375 PF05209 Septum formation inhibitor MinC, N-terminal domain CA943_06380 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CA943_06385 PF03776 Septum formation topological specificity factor MinE CA943_06390 PF00005 ABC transporter CA943_06390 PF12848 ABC transporter CA943_06400 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CA943_06405 PF00005 ABC transporter CA943_06410 PF00899 ThiF family CA943_06415 PF01243 Pyridoxamine 5'-phosphate oxidase CA943_06415 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CA943_06420 PF00034 Cytochrome c CA943_06420 PF03150 Di-haem cytochrome c peroxidase CA943_06425 PF01300 Telomere recombination CA943_06425 PF03481 Putative GTP-binding controlling metal-binding CA943_06430 PF02222 ATP-grasp domain CA943_06435 PF00731 AIR carboxylase CA943_06440 PF01259 SAICAR synthetase CA943_06445 PF01116 Fructose-bisphosphate aldolase class-II CA943_06450 PF00795 Carbon-nitrogen hydrolase CA943_06455 PF00162 Phosphoglycerate kinase CA943_06460 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CA943_06460 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CA943_06465 PF00456 Transketolase, thiamine diphosphate binding domain CA943_06465 PF02779 Transketolase, pyrimidine binding domain CA943_06465 PF02780 Transketolase, C-terminal domain CA943_06470 PF04452 RNA methyltransferase CA943_06475 PF01337 Barstar (barnase inhibitor) CA943_06485 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CA943_06495 PF07332 CA943_06495 CA943_06500 PF05957 CA943_06500 CA943_06505 PF14681 Uracil phosphoribosyltransferase CA943_06510 PF02547 Queuosine biosynthesis protein CA943_06515 PF01702 Queuine tRNA-ribosyltransferase CA943_06520 PF02699 Preprotein translocase subunit CA943_06525 PF02355 Protein export membrane protein CA943_06525 PF07549 SecD/SecF GG Motif CA943_06525 PF13721 SecD export protein N-terminal TM region CA943_06530 PF02355 Protein export membrane protein CA943_06530 PF07549 SecD/SecF GG Motif CA943_06535 PF00919 Uncharacterized protein family UPF0004 CA943_06535 PF01938 TRAM domain CA943_06535 PF04055 Radical SAM superfamily CA943_06540 PF02562 PhoH-like protein CA943_06545 PF02130 Uncharacterized protein family UPF0054 CA943_06550 PF00571 CBS domain CA943_06550 PF03471 Transporter associated domain CA943_06555 PF00795 Carbon-nitrogen hydrolase CA943_06570 PF03895 YadA-like C-terminal region CA943_06575 PF00005 ABC transporter CA943_06575 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CA943_06580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CA943_06585 PF00528 Binding-protein-dependent transport system inner membrane component CA943_06590 PF00528 Binding-protein-dependent transport system inner membrane component CA943_06590 PF12911 CA943_06590 CA943_06595 PF03576 Peptidase family S58 CA943_06600 PF04951 D-aminopeptidase CA943_06605 PF01112 Asparaginase CA943_06610 PF00075 RNase H CA943_06620 PF00753 Metallo-beta-lactamase superfamily CA943_06620 PF16123 CA943_06620 CA943_06625 PF01464 Transglycosylase SLT domain CA943_06625 PF01476 LysM domain CA943_06630 PF00691 OmpA family CA943_06630 PF06078 Bacterial protein of unknown function (DUF937) CA943_06640 PF00677 Lumazine binding domain CA943_06645 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CA943_06645 PF01872 RibD C-terminal domain CA943_06650 PF03477 ATP cone domain CA943_06655 PF00464 Serine hydroxymethyltransferase CA943_06660 PF00579 tRNA synthetases class I (W and Y) CA943_06660 PF01479 S4 domain CA943_06665 PF03702 Uncharacterised protein family (UPF0075) CA943_06670 PF01521 Iron-sulphur cluster biosynthesis CA943_06680 PF00380 Ribosomal protein S9/S16 CA943_06685 PF00572 Ribosomal protein L13 CA943_06690 PF01523 Putative modulator of DNA gyrase CA943_06695 PF04751 Protein of unknown function (DUF615) CA943_06700 PF02230 Phospholipase/Carboxylesterase CA943_06705 PF00749 tRNA synthetases class I (E and Q), catalytic domain CA943_06715 PF02325 CA943_06715 CA943_06720 PF00294 pfkB family carbohydrate kinase CA943_06725 PF11906 CA943_06725 CA943_06725 PF13719 CA943_06725 CA943_06730 PF06325 Ribosomal protein L11 methyltransferase (PrmA) CA943_06735 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CA943_06735 PF02785 Biotin carboxylase C-terminal domain CA943_06735 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CA943_06740 PF00364 Biotin-requiring enzyme CA943_06745 PF01225 Mur ligase family, catalytic domain CA943_06745 PF02875 Mur ligase family, glutamate ligase domain CA943_06745 PF08245 Mur ligase middle domain CA943_06750 PF00773 RNB domain CA943_06755 PF03739 CA943_06755 CA943_06760 PF00149 Calcineurin-like phosphoesterase CA943_06765 PF01553 Acyltransferase CA943_06770 PF01979 Amidohydrolase family CA943_06775 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CA943_06775 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CA943_06780 PF03652 Uncharacterised protein family (UPF0081) CA943_06790 PF00301 Rubredoxin CA943_06795 PF02581 Thiamine monophosphate synthase/TENI CA943_06800 PF00202 Aminotransferase class-III CA943_06805 PF00270 DEAD/DEAH box helicase CA943_06805 PF00271 Helicase conserved C-terminal domain CA943_06810 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase CA943_06815 PF01743 Poly A polymerase head domain CA943_06815 PF12627 Probable RNA and SrmB- binding site of polymerase A CA943_06820 PF01812 5-formyltetrahydrofolate cyclo-ligase family CA943_06850 PF03527 CA943_06850 CA943_06850 PF14414 CA943_06850 CA943_06870 PF04328 CA943_06870 CA943_06875 PF02554 CA943_06875 CA943_06875 PF13722 CA943_06875 CA943_06885 PF00890 FAD binding domain CA943_06890 PF05145 CA943_06890 CA943_06895 PF01970 CA943_06895 CA943_06900 PF07331 CA943_06900 CA943_06905 PF03401 Tripartite tricarboxylate transporter family receptor CA943_06910 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CA943_06910 PF05221 S-adenosyl-L-homocysteine hydrolase CA943_06915 PF00438 S-adenosylmethionine synthetase, N-terminal domain CA943_06915 PF02772 S-adenosylmethionine synthetase, central domain CA943_06915 PF02773 S-adenosylmethionine synthetase, C-terminal domain CA943_06920 PF03279 CA943_06920 CA943_06925 PF00156 Phosphoribosyl transferase domain CA943_06930 PF03372 Endonuclease/Exonuclease/phosphatase family CA943_06935 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CA943_06935 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CA943_06940 PF07690 Major Facilitator Superfamily CA943_06945 PF00561 alpha/beta hydrolase fold CA943_06945 PF07021 Methionine biosynthesis protein MetW CA943_06950 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CA943_06960 PF00375 Sodium:dicarboxylate symporter family CA943_06965 PF01276 Orn/Lys/Arg decarboxylase, major domain CA943_06965 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CA943_06965 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CA943_06970 PF02687 CA943_06970 CA943_06970 PF12704 MacB-like periplasmic core domain CA943_06975 PF00005 ABC transporter CA943_06985 PF00245 Alkaline phosphatase CA943_06990 PF00072 Response regulator receiver domain CA943_06990 PF00196 Bacterial regulatory proteins, luxR family CA943_07000 PF00034 Cytochrome c CA943_07000 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CA943_07005 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CA943_07010 PF00034 Cytochrome c CA943_07010 PF03150 Di-haem cytochrome c peroxidase CA943_07015 PF04116 CA943_07015 CA943_07020 PF09375 Imelysin CA943_07025 PF06537 CA943_07025 CA943_07030 PF09375 Imelysin CA943_07040 PF13449 Esterase-like activity of phytase CA943_07060 PF05656 CA943_07060 CA943_07065 PF04386 Stringent starvation protein B CA943_07070 PF00043 Glutathione S-transferase, C-terminal domain CA943_07070 PF13417 Glutathione S-transferase, N-terminal domain CA943_07075 PF02167 Cytochrome C1 family CA943_07080 PF00032 Cytochrome b(C-terminal)/b6/petD CA943_07080 PF00033 Cytochrome b(N-terminal)/b6/petB CA943_07085 PF00355 Rieske [2Fe-2S] domain CA943_07090 PF01741 Large-conductance mechanosensitive channel, MscL CA943_07095 PF01784 NIF3 (NGG1p interacting factor 3) CA943_07100 PF13180 PDZ domain CA943_07100 PF13365 Trypsin-like peptidase domain CA943_07105 PF00902 Sec-independent protein translocase protein (TatC) CA943_07110 PF02416 mttA/Hcf106 family CA943_07115 PF02416 mttA/Hcf106 family CA943_07120 PF00977 Histidine biosynthesis protein CA943_07125 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CA943_07130 PF01722 BolA-like protein CA943_07135 PF01061 CA943_07135 CA943_07140 PF00005 ABC transporter CA943_07145 PF05494 Toluene tolerance, Ttg2 CA943_07150 PF04333 CA943_07150 CA943_07155 PF02470 CA943_07155 CA943_07160 PF02405 CA943_07160 CA943_07165 PF00005 ABC transporter CA943_07170 PF02481 DNA recombination-mediator protein A CA943_07175 PF01327 Polypeptide deformylase CA943_07180 PF01168 Alanine racemase, N-terminal domain CA943_07185 PF00571 CBS domain CA943_07185 PF01595 CA943_07185 CA943_07185 PF03471 Transporter associated domain CA943_07190 PF01380 SIS domain CA943_07190 PF13522 Glutamine amidotransferase domain CA943_07195 PF00578 AhpC/TSA family CA943_07195 PF01625 Peptide methionine sulfoxide reductase CA943_07195 PF01641 SelR domain CA943_07205 PF00436 Single-strand binding protein family CA943_07210 PF00436 Single-strand binding protein family CA943_07215 PF07690 Major Facilitator Superfamily CA943_07220 PF00005 ABC transporter CA943_07225 PF00593 TonB dependent receptor CA943_07225 PF07715 TonB-dependent Receptor Plug Domain CA943_07230 PF01966 HD domain CA943_07230 PF13286 Phosphohydrolase-associated domain CA943_07235 PF00905 Penicillin binding protein transpeptidase domain CA943_07235 PF00912 Transglycosylase CA943_07235 PF17092 CA943_07235 CA943_07240 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CA943_07240 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CA943_07250 PF01491 Frataxin-like domain CA943_07255 PF01578 CA943_07255 CA943_07260 PF05140 CA943_07260 CA943_07265 PF00034 Cytochrome c CA943_07270 PF01926 50S ribosome-binding GTPase CA943_07275 PF06092 CA943_07275 CA943_07280 PF00490 Delta-aminolevulinic acid dehydratase CA943_07285 PF02683 CA943_07285 CA943_07285 PF11412 Disulphide bond corrector protein DsbC CA943_07285 PF13098 Thioredoxin-like domain CA943_07290 PF10011 Predicted membrane protein (DUF2254) CA943_07295 PF03616 CA943_07295 CA943_07300 PF00491 Arginase family CA943_07305 PF16695 CA943_07305 CA943_07315 PF01196 Ribosomal protein L17 CA943_07320 PF01000 RNA polymerase Rpb3/RpoA insert domain CA943_07320 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CA943_07320 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CA943_07325 PF00163 Ribosomal protein S4/S9 N-terminal domain CA943_07325 PF01479 S4 domain CA943_07330 PF00411 Ribosomal protein S11 CA943_07335 PF00416 Ribosomal protein S13/S18 CA943_07340 PF00444 Ribosomal protein L36 CA943_07345 PF01176 Translation initiation factor 1A / IF-1 CA943_07350 PF00344 SecY translocase CA943_07355 PF00828 Ribosomal protein L18e/L15 CA943_07360 PF00327 Ribosomal protein L30p/L7e CA943_07365 PF00333 Ribosomal protein S5, N-terminal domain CA943_07365 PF03719 Ribosomal protein S5, C-terminal domain CA943_07370 PF00861 Ribosomal L18p/L5e family CA943_07375 PF00347 Ribosomal protein L6 CA943_07380 PF00410 Ribosomal protein S8 CA943_07385 PF00253 Ribosomal protein S14p/S29e CA943_07390 PF00281 Ribosomal protein L5 CA943_07390 PF00673 ribosomal L5P family C-terminus CA943_07395 PF00467 KOW motif CA943_07395 PF17136 CA943_07395 CA943_07400 PF00238 Ribosomal protein L14p/L23e CA943_07405 PF03553 CA943_07405 CA943_07405 PF13726 CA943_07405 CA943_07410 PF03553 CA943_07410 CA943_07410 PF13726 CA943_07410 CA943_07415 PF00394 Multicopper oxidase CA943_07415 PF07732 Multicopper oxidase CA943_07420 PF00578 AhpC/TSA family CA943_07420 PF02630 SCO1/SenC CA943_07430 PF00122 E1-E2 ATPase CA943_07430 PF00403 Heavy-metal-associated domain CA943_07430 PF00702 haloacid dehalogenase-like hydrolase CA943_07435 PF07331 CA943_07435 CA943_07440 PF01970 CA943_07440 CA943_07450 PF02798 Glutathione S-transferase, N-terminal domain CA943_07450 PF14497 Glutathione S-transferase, C-terminal domain CA943_07455 PF13173 AAA domain CA943_07465 PF01565 FAD binding domain CA943_07465 PF02913 FAD linked oxidases, C-terminal domain CA943_07470 PF03895 YadA-like C-terminal region CA943_07470 PF05662 Coiled stalk of trimeric autotransporter adhesin CA943_07470 PF13018 CA943_07470 CA943_07475 PF03895 YadA-like C-terminal region CA943_07475 PF05662 Coiled stalk of trimeric autotransporter adhesin CA943_07480 PF05658 Head domain of trimeric autotransporter adhesin CA943_07480 PF13018 CA943_07480 CA943_07485 PF03895 YadA-like C-terminal region CA943_07485 PF05658 Head domain of trimeric autotransporter adhesin CA943_07485 PF05662 Coiled stalk of trimeric autotransporter adhesin CA943_07485 PF13018 CA943_07485 CA943_07490 PF03895 YadA-like C-terminal region CA943_07490 PF05658 Head domain of trimeric autotransporter adhesin CA943_07490 PF05662 Coiled stalk of trimeric autotransporter adhesin CA943_07490 PF13018 CA943_07490 CA943_07495 PF00366 Ribosomal protein S17 CA943_07500 PF00831 Ribosomal L29 protein CA943_07505 PF00252 Ribosomal protein L16p/L10e CA943_07510 PF00189 Ribosomal protein S3, C-terminal domain CA943_07510 PF07650 KH domain CA943_07515 PF00237 Ribosomal protein L22p/L17e CA943_07520 PF00203 Ribosomal protein S19 CA943_07525 PF00181 Ribosomal Proteins L2, RNA binding domain CA943_07525 PF03947 Ribosomal Proteins L2, C-terminal domain CA943_07530 PF00276 Ribosomal protein L23 CA943_07535 PF00573 Ribosomal protein L4/L1 family CA943_07540 PF00297 Ribosomal protein L3 CA943_07545 PF02646 CA943_07545 CA943_07550 PF03180 NLPA lipoprotein CA943_07555 PF00528 Binding-protein-dependent transport system inner membrane component CA943_07560 PF00005 ABC transporter CA943_07560 PF09383 NIL domain CA943_07585 PF00338 Ribosomal protein S10p/S20e CA943_07590 PF00005 ABC transporter CA943_07590 PF00664 ABC transporter transmembrane region CA943_07595 PF04221 RelB antitoxin CA943_07600 PF00009 Elongation factor Tu GTP binding domain CA943_07600 PF03143 Elongation factor Tu C-terminal domain CA943_07600 PF03144 Elongation factor Tu domain 2 CA943_07605 PF00009 Elongation factor Tu GTP binding domain CA943_07605 PF00679 Elongation factor G C-terminus CA943_07605 PF03144 Elongation factor Tu domain 2 CA943_07605 PF03764 Elongation factor G, domain IV CA943_07605 PF14492 Elongation Factor G, domain II CA943_07610 PF00177 Ribosomal protein S7p/S5e CA943_07615 PF00164 Ribosomal protein S12/S23 CA943_07635 PF03328 HpcH/HpaI aldolase/citrate lyase family CA943_07640 PF02515 CoA-transferase family III CA943_07645 PF13452 N-terminal half of MaoC dehydratase CA943_07650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CA943_07650 PF02770 Acyl-CoA dehydrogenase, middle domain CA943_07650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CA943_07665 PF12844 Helix-turn-helix domain CA943_07670 PF01555 DNA methylase CA943_07675 PF06945 CA943_07675 CA943_07680 PF00696 Amino acid kinase family CA943_07685 PF00202 Aminotransferase class-III CA943_07690 PF01118 Semialdehyde dehydrogenase, NAD binding domain CA943_07695 PF00583 Acetyltransferase (GNAT) family CA943_07700 PF05232 CA943_07700 CA943_07705 PF00491 Arginase family CA943_07710 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CA943_07710 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CA943_07715 PF00623 RNA polymerase Rpb1, domain 2 CA943_07715 PF04983 RNA polymerase Rpb1, domain 3 CA943_07715 PF04997 RNA polymerase Rpb1, domain 1 CA943_07715 PF04998 RNA polymerase Rpb1, domain 5 CA943_07715 PF05000 RNA polymerase Rpb1, domain 4 CA943_07720 PF00562 RNA polymerase Rpb2, domain 6 CA943_07720 PF04560 RNA polymerase Rpb2, domain 7 CA943_07720 PF04561 RNA polymerase Rpb2, domain 2 CA943_07720 PF04563 RNA polymerase beta subunit CA943_07720 PF04565 RNA polymerase Rpb2, domain 3 CA943_07720 PF10385 RNA polymerase beta subunit external 1 domain CA943_07725 PF00542 Ribosomal protein L7/L12 C-terminal domain CA943_07725 PF16320 CA943_07725 CA943_07730 PF00466 Ribosomal protein L10 CA943_07735 PF00687 Ribosomal protein L1p/L10e family CA943_07740 PF00298 Ribosomal protein L11, RNA binding domain CA943_07740 PF03946 Ribosomal protein L11, N-terminal domain CA943_07745 PF00467 KOW motif CA943_07745 PF02357 Transcription termination factor nusG CA943_07750 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CA943_07760 PF00009 Elongation factor Tu GTP binding domain CA943_07760 PF03143 Elongation factor Tu C-terminal domain CA943_07760 PF03144 Elongation factor Tu domain 2 CA943_07765 PF08238 Sel1 repeat CA943_07785 PF02195 ParB-like nuclease domain CA943_07790 PF13614 AAA domain CA943_07795 PF02527 rRNA small subunit methyltransferase G CA943_07800 PF01134 Glucose inhibited division protein A CA943_07800 PF13932 GidA associated domain 3 CA943_07805 PF01230 HIT domain CA943_07810 PF02096 60Kd inner membrane protein CA943_07810 PF14849 YidC periplasmic domain CA943_07815 PF01809 CA943_07815 CA943_07820 PF00825 Ribonuclease P CA943_07825 PF00468 Ribosomal protein L34