CA943_00005 SM00382 ATPases associated with a variety of cellular activities CA943_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain CA943_00010 SM00480 DNA polymerase III beta subunit CA943_00015 SM00387 Histidine kinase-like ATPases CA943_00015 SM00433 TopoisomeraseII CA943_00025 SM00382 ATPases associated with a variety of cellular activities CA943_00040 SM00382 ATPases associated with a variety of cellular activities CA943_00070 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CA943_00070 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CA943_00070 SM00493 CA943_00070 CA943_00075 SM00729 Elongator protein 3, MiaB family, Radical SAM CA943_00110 SM00836 DALR anticodon binding domain CA943_00110 SM01016 Arginyl tRNA synthetase N terminal dom CA943_00120 SM00917 LeuA allosteric (dimerisation) domain CA943_00130 SM00671 Sel1-like repeats. CA943_00195 SM00062 Bacterial periplasmic substrate-binding proteins CA943_00210 SM00382 ATPases associated with a variety of cellular activities CA943_00285 SM00936 Penicillin-binding protein 5, C-terminal domain CA943_00315 SM00729 Elongator protein 3, MiaB family, Radical SAM CA943_00350 SM00487 DEAD-like helicases superfamily CA943_00350 SM00490 helicase superfamily c-terminal domain CA943_00370 SM00091 PAS domain CA943_00370 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CA943_00370 SM00387 Histidine kinase-like ATPases CA943_00370 SM00388 His Kinase A (phosphoacceptor) domain CA943_00375 SM00448 cheY-homologous receiver domain CA943_00410 SM00382 ATPases associated with a variety of cellular activities CA943_00410 SM01086 C-terminal, D2-small domain, of ClpB protein CA943_00585 SM00450 Rhodanese Homology Domain CA943_00590 SM00855 Phosphoglycerate mutase family CA943_00600 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CA943_00600 SM00245 tail specific protease CA943_00655 SM00382 ATPases associated with a variety of cellular activities CA943_00680 SM00382 ATPases associated with a variety of cellular activities CA943_00710 SM00833 Cobalamin synthesis protein cobW C-terminal domain CA943_00720 SM00382 ATPases associated with a variety of cellular activities CA943_00750 SM00845 GatB domain CA943_00795 SM00382 ATPases associated with a variety of cellular activities CA943_00810 SM00382 ATPases associated with a variety of cellular activities CA943_00835 SM00421 helix_turn_helix, Lux Regulon CA943_00895 SM00382 ATPases associated with a variety of cellular activities CA943_00895 SM01086 C-terminal, D2-small domain, of ClpB protein CA943_00925 SM00487 DEAD-like helicases superfamily CA943_00925 SM00490 helicase superfamily c-terminal domain CA943_00945 SM00487 DEAD-like helicases superfamily CA943_01000 SM00382 ATPases associated with a variety of cellular activities CA943_01005 SM00382 ATPases associated with a variety of cellular activities CA943_01040 SM00925 MltA specific insert domain CA943_01055 SM00749 bacterial OsmY and nodulation domain CA943_01095 SM00382 ATPases associated with a variety of cellular activities CA943_01115 SM00116 Domain in cystathionine beta-synthase and other proteins. CA943_01130 SM00387 Histidine kinase-like ATPases CA943_01130 SM00388 His Kinase A (phosphoacceptor) domain CA943_01135 SM00448 cheY-homologous receiver domain CA943_01135 SM00862 Transcriptional regulatory protein, C terminal CA943_01180 SM00870 CA943_01180 CA943_01225 SM00937 CA943_01225 CA943_01315 SM00829 Enoylreductase CA943_01360 SM00905 Dihydroneopterin aldolase CA943_01370 SM00155 Phospholipase D. Active site motifs. CA943_01385 SM00062 Bacterial periplasmic substrate-binding proteins CA943_01395 SM00729 Elongator protein 3, MiaB family, Radical SAM CA943_01395 SM00876 Biotin and Thiamin Synthesis associated domain CA943_01405 SM00479 CA943_01405 CA943_01410 SM00479 CA943_01410 CA943_01445 SM00644 CA943_01445 CA943_01460 SM00382 ATPases associated with a variety of cellular activities CA943_01460 SM00962 SRP54-type protein, GTPase domain CA943_01460 SM00963 SRP54-type protein, helical bundle domain CA943_01465 SM00257 Lysin motif CA943_01540 SM00984 UDP binding domain CA943_01575 SM01400 CA943_01575 CA943_01640 SM00382 ATPases associated with a variety of cellular activities CA943_01640 SM00962 SRP54-type protein, GTPase domain CA943_01640 SM00963 SRP54-type protein, helical bundle domain CA943_01645 SM00880 CA943_01645 CA943_01645 SM01118 CA943_01645 CA943_01650 SM00347 helix_turn_helix multiple antibiotic resistance protein CA943_01685 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CA943_01700 SM00883 Chaperonin 10 Kd subunit CA943_01705 SM00062 Bacterial periplasmic substrate-binding proteins CA943_01880 SM00382 ATPases associated with a variety of cellular activities CA943_01890 SM00460 Transglutaminase/protease-like homologues CA943_01895 SM00460 Transglutaminase/protease-like homologues CA943_01950 SM00151 SWI complex, BAF60b domains CA943_01990 SM00382 ATPases associated with a variety of cellular activities CA943_01995 SM00382 ATPases associated with a variety of cellular activities CA943_02000 SM00829 Enoylreductase CA943_02070 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CA943_02075 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CA943_02125 SM00487 DEAD-like helicases superfamily CA943_02125 SM00490 helicase superfamily c-terminal domain CA943_02125 SM00982 CA943_02125 CA943_02125 SM01058 CarD-like/TRCF domain CA943_02145 SM00387 Histidine kinase-like ATPases CA943_02145 SM00388 His Kinase A (phosphoacceptor) domain CA943_02150 SM00448 cheY-homologous receiver domain CA943_02150 SM00862 Transcriptional regulatory protein, C terminal CA943_02180 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CA943_02180 SM00292 breast cancer carboxy-terminal domain CA943_02180 SM00532 Ligase N family CA943_02220 SM00382 ATPases associated with a variety of cellular activities CA943_02225 SM00382 ATPases associated with a variety of cellular activities CA943_02230 SM00478 endonuclease III CA943_02230 SM00525 CA943_02230 CA943_02255 SM00954 Region found in RelA / SpoT proteins CA943_02265 SM00316 Ribosomal protein S1-like RNA-binding domain CA943_02270 SM00363 S4 RNA-binding domain CA943_02310 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CA943_02315 SM00822 CA943_02315 CA943_02325 SM00825 Beta-ketoacyl synthase CA943_02335 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CA943_02340 SM00838 Elongation factor G C-terminus CA943_02350 SM00358 Double-stranded RNA binding motif CA943_02350 SM00535 Ribonuclease III family CA943_02480 SM01209 CA943_02480 CA943_02480 SM01210 CA943_02480 CA943_02565 SM00382 ATPases associated with a variety of cellular activities CA943_02575 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CA943_02575 SM00245 tail specific protease CA943_02605 SM00434 DNA Topoisomerase IV CA943_02615 SM00830 Chorismate mutase type II CA943_02630 SM00316 Ribosomal protein S1-like RNA-binding domain CA943_02635 SM00411 bacterial (prokaryotic) histone like domain CA943_02655 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CA943_02700 SM00100 Cyclic nucleotide-monophosphate binding domain CA943_02700 SM00419 helix_turn_helix, cAMP Regulatory protein CA943_02730 SM00981 CA943_02730 CA943_02760 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CA943_02765 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CA943_02765 SM00534 ATPase domain of DNA mismatch repair MUTS family CA943_02800 SM00028 Tetratricopeptide repeats CA943_02805 SM00840 CA943_02805 CA943_02850 SM00382 ATPases associated with a variety of cellular activities CA943_02875 SM00841 Elongation factor P, C-terminal CA943_02875 SM01185 CA943_02875 CA943_02915 SM00014 Acid phosphatase homologues CA943_02935 SM00357 Cold shock protein domain CA943_02935 SM00382 ATPases associated with a variety of cellular activities CA943_02935 SM00959 Rho termination factor, N-terminal domain CA943_02945 SM00387 Histidine kinase-like ATPases CA943_02945 SM00433 TopoisomeraseII CA943_02950 SM00434 DNA Topoisomerase IV CA943_02965 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CA943_02990 SM00226 Low molecular weight phosphatase family CA943_03015 SM00271 DnaJ molecular chaperone homology domain CA943_03030 SM00671 Sel1-like repeats. CA943_03035 SM00671 Sel1-like repeats. CA943_03045 SM00671 Sel1-like repeats. CA943_03050 SM00671 Sel1-like repeats. CA943_03080 SM00382 ATPases associated with a variety of cellular activities CA943_03095 SM00849 Metallo-beta-lactamase superfamily CA943_03100 SM00481 DNA polymerase alpha chain like domain CA943_03135 SM00873 B3/4 domain CA943_03135 SM00874 tRNA synthetase B5 domain CA943_03135 SM00896 Ferredoxin-fold anticodon binding domain CA943_03140 SM00411 bacterial (prokaryotic) histone like domain CA943_03145 SM00422 helix_turn_helix, mercury resistance CA943_03190 SM01211 CA943_03190 CA943_03195 SM00116 Domain in cystathionine beta-synthase and other proteins. CA943_03195 SM01240 CA943_03195 CA943_03220 SM00671 Sel1-like repeats. CA943_03275 SM00382 ATPases associated with a variety of cellular activities CA943_03305 SM00382 ATPases associated with a variety of cellular activities CA943_03310 SM00382 ATPases associated with a variety of cellular activities CA943_03320 SM00919 Malic enzyme, NAD binding domain CA943_03320 SM01274 CA943_03320 CA943_03325 SM00861 Transketolase, pyrimidine binding domain CA943_03360 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CA943_03360 SM00954 Region found in RelA / SpoT proteins CA943_03365 SM01409 CA943_03365 CA943_03370 SM00072 Guanylate kinase homologues. CA943_03375 SM00670 Large family of predicted nucleotide-binding domains CA943_03405 SM01005 Alanine racemase, C-terminal domain CA943_03410 SM00382 ATPases associated with a variety of cellular activities CA943_03420 SM00382 ATPases associated with a variety of cellular activities CA943_03455 SM00481 DNA polymerase alpha chain like domain CA943_03465 SM00382 ATPases associated with a variety of cellular activities CA943_03470 SM00316 Ribosomal protein S1-like RNA-binding domain CA943_03505 SM00318 Staphylococcal nuclease homologues CA943_03540 SM00382 ATPases associated with a variety of cellular activities CA943_03560 SM00316 Ribosomal protein S1-like RNA-binding domain CA943_03560 SM00357 Cold shock protein domain CA943_03560 SM00955 CA943_03560 CA943_03565 SM00967 RNA 2'-O ribose methyltransferase substrate binding CA943_03575 SM00411 bacterial (prokaryotic) histone like domain CA943_03585 SM00382 ATPases associated with a variety of cellular activities CA943_03680 SM00382 ATPases associated with a variety of cellular activities CA943_03685 SM00382 ATPases associated with a variety of cellular activities CA943_03705 SM00421 helix_turn_helix, Lux Regulon CA943_03705 SM00448 cheY-homologous receiver domain CA943_03710 SM00091 PAS domain CA943_03710 SM00387 Histidine kinase-like ATPases CA943_03710 SM00388 His Kinase A (phosphoacceptor) domain CA943_03770 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CA943_03815 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CA943_03825 SM00935 Outer membrane protein (OmpH-like) CA943_03880 SM00244 prohibitin homologues CA943_03925 SM00248 ankyrin repeats CA943_04045 SM00363 S4 RNA-binding domain CA943_04050 SM00938 Nitrogen regulatory protein P-II CA943_04075 SM00382 ATPases associated with a variety of cellular activities CA943_04090 SM00487 DEAD-like helicases superfamily CA943_04090 SM00490 helicase superfamily c-terminal domain CA943_04160 SM00382 ATPases associated with a variety of cellular activities CA943_04165 SM00382 ATPases associated with a variety of cellular activities CA943_04185 SM00859 Semialdehyde dehydrogenase, NAD binding domain CA943_04190 SM01329 CA943_04190 CA943_04235 SM00116 Domain in cystathionine beta-synthase and other proteins. CA943_04250 SM00893 Electron transfer flavoprotein domain CA943_04255 SM00893 Electron transfer flavoprotein domain CA943_04265 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CA943_04265 SM00465 GIY-YIG type nucleases (URI domain) CA943_04280 SM00479 CA943_04280 CA943_04310 SM00240 Forkhead associated domain CA943_04320 SM00858 CA943_04320 CA943_04345 SM00986 Uracil DNA glycosylase superfamily CA943_04345 SM00987 UreE urease accessory protein, C-terminal domain CA943_04355 SM00671 Sel1-like repeats. CA943_04365 SM00400 zinc finger CA943_04365 SM00493 CA943_04365 CA943_04380 SM00788 Adenylosuccinate synthetase CA943_04385 SM00244 prohibitin homologues CA943_04390 SM00244 prohibitin homologues CA943_04410 SM00564 beta-propeller repeat CA943_04440 SM00562 CA943_04440 CA943_04485 SM00881 CoA binding domain CA943_04520 SM00257 Lysin motif CA943_04535 SM01207 CA943_04535 CA943_04555 SM00382 ATPases associated with a variety of cellular activities CA943_04590 SM00347 helix_turn_helix multiple antibiotic resistance protein CA943_04600 SM01005 Alanine racemase, C-terminal domain CA943_04610 SM00671 Sel1-like repeats. CA943_04620 SM00671 Sel1-like repeats. CA943_04630 SM00833 Cobalamin synthesis protein cobW C-terminal domain CA943_04645 SM00382 ATPases associated with a variety of cellular activities CA943_04755 SM00248 ankyrin repeats CA943_04820 SM00382 ATPases associated with a variety of cellular activities CA943_04820 SM01086 C-terminal, D2-small domain, of ClpB protein CA943_04835 SM01192 CA943_04835 CA943_04835 SM01193 CA943_04835 CA943_04890 SM01150 CA943_04890 CA943_04955 SM00838 Elongation factor G C-terminus CA943_04975 SM00316 Ribosomal protein S1-like RNA-binding domain CA943_04985 SM00363 S4 RNA-binding domain CA943_05000 SM00363 S4 RNA-binding domain CA943_05035 SM00904 Riboflavin kinase CA943_05080 SM00382 ATPases associated with a variety of cellular activities CA943_05080 SM01086 C-terminal, D2-small domain, of ClpB protein CA943_05085 SM00357 Cold shock protein domain CA943_05115 SM00382 ATPases associated with a variety of cellular activities CA943_05125 SM01230 CA943_05125 CA943_05130 SM00729 Elongator protein 3, MiaB family, Radical SAM CA943_05150 SM00382 ATPases associated with a variety of cellular activities CA943_05180 SM00861 Transketolase, pyrimidine binding domain CA943_05215 SM00345 helix_turn_helix gluconate operon transcriptional repressor CA943_05215 SM00866 CA943_05215 CA943_05220 SM00450 Rhodanese Homology Domain CA943_05235 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CA943_05235 SM00474 3'-5' exonuclease CA943_05235 SM00475 5'-3' exonuclease CA943_05235 SM00482 DNA polymerase A domain CA943_05275 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CA943_05285 SM00382 ATPases associated with a variety of cellular activities CA943_05285 SM00464 Found in ATP-dependent protease La (LON) CA943_05290 SM00382 ATPases associated with a variety of cellular activities CA943_05290 SM00994 ClpX C4-type zinc finger CA943_05290 SM01086 C-terminal, D2-small domain, of ClpB protein CA943_05555 SM00530 Helix-turn-helix XRE-family like proteins CA943_05590 SM01130 CA943_05590 CA943_05625 SM00382 ATPases associated with a variety of cellular activities CA943_05650 SM00327 von Willebrand factor (vWF) type A domain CA943_05655 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CA943_05665 SM00316 Ribosomal protein S1-like RNA-binding domain CA943_05665 SM00322 K homology RNA-binding domain CA943_05670 SM01387 CA943_05670 CA943_05710 SM00382 ATPases associated with a variety of cellular activities CA943_05720 SM00843 CA943_05720 CA943_05730 SM00463 Small MutS-related domain CA943_05755 SM00869 Autotransporter beta-domain CA943_05760 SM00271 DnaJ molecular chaperone homology domain CA943_05850 SM00382 ATPases associated with a variety of cellular activities CA943_05890 SM00382 ATPases associated with a variety of cellular activities CA943_05900 SM01103 CA943_05900 CA943_05920 SM00851 MGS-like domain CA943_05920 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CA943_05925 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CA943_05930 SM00493 CA943_05930 CA943_05945 SM00382 ATPases associated with a variety of cellular activities CA943_06000 SM00646 CA943_06000 CA943_06005 SM00853 MutL C terminal dimerisation domain CA943_06005 SM01340 CA943_06005 CA943_06095 SM00487 DEAD-like helicases superfamily CA943_06095 SM00490 helicase superfamily c-terminal domain CA943_06115 SM00798 AICARFT/IMPCHase bienzyme CA943_06115 SM00851 MGS-like domain CA943_06125 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CA943_06140 SM00382 ATPases associated with a variety of cellular activities CA943_06200 SM00116 Domain in cystathionine beta-synthase and other proteins. CA943_06200 SM00924 MgtE intracellular N domain CA943_06205 SM00957 SecA DEAD-like domain CA943_06205 SM00958 SecA preprotein cross-linking domain CA943_06225 SM00864 Tubulin/FtsZ family, GTPase domain CA943_06225 SM00865 Tubulin/FtsZ family, C-terminal domain CA943_06230 SM00842 Cell division protein FtsA CA943_06240 SM01209 CA943_06240 CA943_06300 SM01060 CA943_06300 CA943_06320 SM00563 Phosphate acyltransferases CA943_06330 SM00650 Ribosomal RNA adenine dimethylases CA943_06360 SM00448 cheY-homologous receiver domain CA943_06360 SM00862 Transcriptional regulatory protein, C terminal CA943_06365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CA943_06365 SM00387 Histidine kinase-like ATPases CA943_06365 SM00388 His Kinase A (phosphoacceptor) domain CA943_06390 SM00382 ATPases associated with a variety of cellular activities CA943_06435 SM01001 AIR carboxylase CA943_06460 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CA943_06465 SM00861 Transketolase, pyrimidine binding domain CA943_06520 SM01323 CA943_06520 CA943_06535 SM00729 Elongator protein 3, MiaB family, Radical SAM CA943_06550 SM00116 Domain in cystathionine beta-synthase and other proteins. CA943_06550 SM01091 Transporter associated domain CA943_06575 SM00382 ATPases associated with a variety of cellular activities CA943_06620 SM00849 Metallo-beta-lactamase superfamily CA943_06625 SM00257 Lysin motif CA943_06735 SM00878 Biotin carboxylase C-terminal domain CA943_06750 SM00955 CA943_06750 CA943_06765 SM00563 Phosphate acyltransferases CA943_06780 SM00732 Likely ribonuclease with RNase H fold. CA943_06805 SM00487 DEAD-like helicases superfamily CA943_06805 SM00490 helicase superfamily c-terminal domain CA943_06910 SM00996 S-adenosyl-L-homocysteine hydrolase CA943_06910 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CA943_06975 SM00382 ATPases associated with a variety of cellular activities CA943_06985 SM00098 Alkaline phosphatase homologues CA943_06990 SM00421 helix_turn_helix, Lux Regulon CA943_06990 SM00448 cheY-homologous receiver domain CA943_07100 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CA943_07140 SM00382 ATPases associated with a variety of cellular activities CA943_07165 SM00382 ATPases associated with a variety of cellular activities CA943_07185 SM00116 Domain in cystathionine beta-synthase and other proteins. CA943_07185 SM01091 Transporter associated domain CA943_07220 SM00382 ATPases associated with a variety of cellular activities CA943_07230 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CA943_07250 SM01219 CA943_07250 CA943_07280 SM01004 Delta-aminolevulinic acid dehydratase CA943_07320 SM00662 RNA polymerases D CA943_07325 SM00363 S4 RNA-binding domain CA943_07325 SM01390 CA943_07325 CA943_07345 SM00316 Ribosomal protein S1-like RNA-binding domain CA943_07395 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CA943_07400 SM01374 CA943_07400 CA943_07510 SM00322 K homology RNA-binding domain CA943_07525 SM01382 CA943_07525 CA943_07525 SM01383 CA943_07525 CA943_07560 SM00382 ATPases associated with a variety of cellular activities CA943_07560 SM00930 CA943_07560 CA943_07585 SM01403 CA943_07585 CA943_07590 SM00382 ATPases associated with a variety of cellular activities CA943_07605 SM00838 Elongation factor G C-terminus CA943_07605 SM00889 Elongation factor G, domain IV CA943_07665 SM00530 Helix-turn-helix XRE-family like proteins CA943_07690 SM00859 Semialdehyde dehydrogenase, NAD binding domain CA943_07715 SM00663 RNA polymerase I subunit A N-terminus CA943_07740 SM00649 Ribosomal protein L11/L12 CA943_07745 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CA943_07745 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CA943_07765 SM00671 Sel1-like repeats. CA943_07785 SM00470 ParB-like nuclease domain CA943_07800 SM01228 CA943_07800 CA943_07815 SM01234 CA943_07815