KUI_0001 PF00308 Bacterial dnaA protein KUI_0001 PF08299 Bacterial dnaA protein helix-turn-helix KUI_0001 PF11638 DnaA N-terminal domain KUI_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain KUI_0002 PF02767 DNA polymerase III beta subunit, central domain KUI_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain KUI_0003 PF00204 DNA gyrase B KUI_0003 PF00986 DNA gyrase B subunit, carboxyl terminus KUI_0003 PF01751 Toprim domain KUI_0003 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUI_0004 PF00849 RNA pseudouridylate synthase KUI_0005 PF00005 ABC transporter KUI_0006 PF00528 Binding-protein-dependent transport system inner membrane component KUI_0007 PF00528 Binding-protein-dependent transport system inner membrane component KUI_0007 PF12911 KUI_0007 KUI_0008 PF00005 ABC transporter KUI_0008 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KUI_0009 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KUI_0010 PF09992 Predicted periplasmic protein (DUF2233) KUI_0011 PF00580 UvrD/REP helicase N-terminal domain KUI_0011 PF01443 Viral (Superfamily 1) RNA helicase KUI_0012 PF00175 Oxidoreductase NAD-binding domain KUI_0012 PF00970 Oxidoreductase FAD-binding domain KUI_0013 PF06097 KUI_0013 KUI_0014 PF01131 DNA topoisomerase KUI_0014 PF01751 Toprim domain KUI_0014 PF13342 KUI_0014 KUI_0015 PF04055 Radical SAM superfamily KUI_0015 PF06969 HemN C-terminal domain KUI_0016 PF13679 KUI_0016 KUI_0017 PF00749 tRNA synthetases class I (E and Q), catalytic domain KUI_0018 PF04361 KUI_0018 KUI_0019 PF11738 Protein of unknown function (DUF3298) KUI_0020 PF13462 Thioredoxin KUI_0021 PF05036 Sporulation related domain KUI_0022 PF00750 tRNA synthetases class I (R) KUI_0022 PF03485 Arginyl tRNA synthetase N terminal domain KUI_0022 PF05746 DALR anticodon binding domain KUI_0023 PF08895 KUI_0023 KUI_0024 PF00682 HMGL-like KUI_0024 PF08502 LeuA allosteric (dimerisation) domain KUI_0027 PF04324 BFD-like [2Fe-2S] binding domain KUI_0028 PF00210 Ferritin-like domain KUI_0030 PF00009 Elongation factor Tu GTP binding domain KUI_0030 PF16658 KUI_0030 KUI_0031 PF04011 LemA family KUI_0032 PF04536 TLP18 KUI_0033 PF04536 TLP18 KUI_0034 PF01926 50S ribosome-binding GTPase KUI_0034 PF11981 KUI_0034 KUI_0035 PF11067 KUI_0035 KUI_0036 PF06803 KUI_0036 KUI_0037 PF04226 KUI_0037 KUI_0038 PF03956 KUI_0038 KUI_0039 PF00497 Bacterial extracellular solute-binding proteins, family 3 KUI_0040 PF00528 Binding-protein-dependent transport system inner membrane component KUI_0041 PF00528 Binding-protein-dependent transport system inner membrane component KUI_0042 PF00005 ABC transporter KUI_0043 PF01925 KUI_0043 KUI_0044 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme KUI_0046 PF01040 UbiA prenyltransferase family KUI_0047 PF07399 KUI_0047 KUI_0048 PF00152 tRNA synthetases class II (D, K and N) KUI_0048 PF01336 OB-fold nucleic acid binding domain KUI_0048 PF02938 GAD domain KUI_0051 PF01075 Glycosyltransferase family 9 (heptosyltransferase) KUI_0052 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KUI_0053 PF03099 Biotin/lipoate A/B protein ligase family KUI_0054 PF03309 Type III pantothenate kinase KUI_0056 PF02129 X-Pro dipeptidyl-peptidase (S15 family) KUI_0057 PF00768 D-alanyl-D-alanine carboxypeptidase KUI_0057 PF07943 Penicillin-binding protein 5, C-terminal domain KUI_0058 PF01063 Aminotransferase class IV KUI_0059 PF04359 Protein of unknown function (DUF493) KUI_0060 PF03099 Biotin/lipoate A/B protein ligase family KUI_0061 PF04355 SmpA / OmlA family KUI_0063 PF04055 Radical SAM superfamily KUI_0063 PF16881 KUI_0063 KUI_0064 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KUI_0064 PF16363 KUI_0064 KUI_0065 PF07690 Major Facilitator Superfamily KUI_0066 PF00132 Bacterial transferase hexapeptide (six repeats) KUI_0066 PF12804 MobA-like NTP transferase domain KUI_0067 PF00293 NUDIX domain KUI_0068 PF00140 Sigma-70 factor, region 1 KUI_0068 PF04542 Sigma-70 region 2 KUI_0068 PF04545 Sigma-70, region 4 KUI_0070 PF00270 DEAD/DEAH box helicase KUI_0070 PF00271 Helicase conserved C-terminal domain KUI_0070 PF03880 DbpA RNA binding domain KUI_0071 PF00551 Formyl transferase KUI_0071 PF02911 Formyl transferase, C-terminal domain KUI_0072 PF01189 NOL1/NOP2/sun family KUI_0073 PF14334 KUI_0073 KUI_0074 PF00512 His Kinase A (phospho-acceptor) domain KUI_0074 PF00672 HAMP domain KUI_0074 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUI_0075 PF00072 Response regulator receiver domain KUI_0076 PF02080 TrkA-C domain KUI_0076 PF02254 TrkA-N domain KUI_0077 PF02386 Cation transport protein KUI_0078 PF00588 SpoU rRNA Methylase family KUI_0079 PF00156 Phosphoribosyl transferase domain KUI_0080 PF08241 Methyltransferase domain KUI_0081 PF06996 KUI_0081 KUI_0082 PF00004 ATPase family associated with various cellular activities (AAA) KUI_0082 PF07724 AAA domain (Cdc48 subfamily) KUI_0082 PF10431 C-terminal, D2-small domain, of ClpB protein KUI_0085 PF12790 Type VI secretion lipoprotein KUI_0086 PF05936 KUI_0086 KUI_0087 PF00691 OmpA family KUI_0087 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) KUI_0088 PF06744 KUI_0088 KUI_0088 PF06761 KUI_0088 KUI_0088 PF14331 KUI_0088 KUI_0089 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) KUI_0090 PF08308 KUI_0090 KUI_0091 PF06812 KUI_0091 KUI_0092 PF05591 KUI_0092 KUI_0093 PF05943 KUI_0093 KUI_0094 PF05638 Protein of unknown function (DUF796) KUI_0095 PF07024 ImpE protein KUI_0096 PF04965 Gene 25-like lysozyme KUI_0097 PF05947 KUI_0097 KUI_0098 PF12059 KUI_0098 KUI_0099 PF00593 TonB dependent receptor KUI_0099 PF07715 TonB-dependent Receptor Plug Domain KUI_0111 PF05954 Phage late control gene D protein (GPD) KUI_0115 PF09937 KUI_0115 KUI_0115 PF13599 Pentapeptide repeats (9 copies) KUI_0116 PF00805 Pentapeptide repeats (8 copies) KUI_0116 PF13599 Pentapeptide repeats (9 copies) KUI_0117 PF12059 KUI_0117 KUI_0118 PF13665 KUI_0118 KUI_0130 PF14113 Domain of unknown function (DUF4285) KUI_0135 PF10908 KUI_0135 KUI_0137 PF14113 Domain of unknown function (DUF4285) KUI_0145 PF02556 Preprotein translocase subunit SecB KUI_0146 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KUI_0146 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KUI_0147 PF00462 Glutaredoxin KUI_0148 PF00581 Rhodanese-like domain KUI_0149 PF00300 Histidine phosphatase superfamily (branch 1) KUI_0150 PF01551 Peptidase family M23 KUI_0151 PF03572 Peptidase family S41 KUI_0151 PF13180 PDZ domain KUI_0152 PF00899 ThiF family KUI_0153 PF03480 Bacterial extracellular solute-binding protein, family 7 KUI_0154 PF05299 M61 glycyl aminopeptidase KUI_0154 PF13180 PDZ domain KUI_0155 PF03899 KUI_0155 KUI_0156 PF00119 ATP synthase A chain KUI_0157 PF00137 ATP synthase subunit C KUI_0158 PF00430 ATP synthase B/B' CF(0) KUI_0159 PF00213 ATP synthase delta (OSCP) subunit KUI_0160 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KUI_0160 PF00306 ATP synthase alpha/beta chain, C terminal domain KUI_0160 PF02874 ATP synthase alpha/beta family, beta-barrel domain KUI_0161 PF00231 ATP synthase KUI_0162 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KUI_0162 PF02874 ATP synthase alpha/beta family, beta-barrel domain KUI_0163 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KUI_0164 PF16695 KUI_0164 KUI_0168 PF00005 ABC transporter KUI_0170 PF16149 KUI_0170 KUI_0171 PF06808 KUI_0171 KUI_0172 PF04290 KUI_0172 KUI_0173 PF03480 Bacterial extracellular solute-binding protein, family 7 KUI_0174 PF02492 CobW/HypB/UreG, nucleotide-binding domain KUI_0174 PF07683 Cobalamin synthesis protein cobW C-terminal domain KUI_0175 PF01475 Ferric uptake regulator family KUI_0177 PF00005 ABC transporter KUI_0178 PF00950 KUI_0178 KUI_0179 PF03797 Autotransporter beta-domain KUI_0180 PF00589 Phage integrase family KUI_0180 PF02899 Phage integrase, N-terminal SAM-like domain KUI_0181 PF04340 Protein of unknown function, DUF484 KUI_0182 PF01678 Diaminopimelate epimerase KUI_0183 PF02637 GatB domain KUI_0183 PF02934 GatB/GatE catalytic domain KUI_0184 PF01425 Amidase KUI_0185 PF02686 Glu-tRNAGln amidotransferase C subunit KUI_0186 PF06723 MreB/Mbl protein KUI_0187 PF04085 rod shape-determining protein MreC KUI_0188 PF04093 KUI_0188 KUI_0189 PF00905 Penicillin binding protein transpeptidase domain KUI_0189 PF03717 Penicillin-binding Protein dimerisation domain KUI_0190 PF01098 KUI_0190 KUI_0191 PF02687 KUI_0191 KUI_0192 PF00005 ABC transporter KUI_0193 PF00528 Binding-protein-dependent transport system inner membrane component KUI_0194 PF00528 Binding-protein-dependent transport system inner membrane component KUI_0195 PF00005 ABC transporter KUI_0199 PF02569 Pantoate-beta-alanine ligase KUI_0200 PF02616 ScpA/B protein KUI_0201 PF11943 KUI_0201 KUI_0203 PF01121 Dephospho-CoA kinase KUI_0204 PF07072 Protein of unknown function (DUF1342) KUI_0205 PF00132 Bacterial transferase hexapeptide (six repeats) KUI_0206 PF00293 NUDIX domain KUI_0206 PF02581 Thiamine monophosphate synthase/TENI KUI_0207 PF05673 Protein of unknown function (DUF815) KUI_0208 PF00348 Polyprenyl synthetase KUI_0209 PF00920 Dehydratase family KUI_0210 PF01018 GTP1/OBG KUI_0210 PF01926 50S ribosome-binding GTPase KUI_0211 PF13449 Esterase-like activity of phytase KUI_0212 PF11604 Copper binding periplasmic protein CusF KUI_0213 PF00004 ATPase family associated with various cellular activities (AAA) KUI_0213 PF07724 AAA domain (Cdc48 subfamily) KUI_0213 PF10431 C-terminal, D2-small domain, of ClpB protein KUI_0214 PF00227 Proteasome subunit KUI_0215 PF13449 Esterase-like activity of phytase KUI_0216 PF01258 Prokaryotic dksA/traR C4-type zinc finger KUI_0217 PF02954 Bacterial regulatory protein, Fis family KUI_0218 PF01208 Uroporphyrinogen decarboxylase (URO-D) KUI_0219 PF00270 DEAD/DEAH box helicase KUI_0219 PF00271 Helicase conserved C-terminal domain KUI_0220 PF01557 Fumarylacetoacetate (FAA) hydrolase family KUI_0222 PF01136 KUI_0222 KUI_0222 PF16325 KUI_0222 KUI_0223 PF00271 Helicase conserved C-terminal domain KUI_0223 PF04851 Type III restriction enzyme, res subunit KUI_0224 PF09827 CRISPR associated protein Cas2 KUI_0225 PF01867 CRISPR associated protein Cas1 KUI_0226 PF01930 Domain of unknown function DUF83 KUI_0227 PF05107 KUI_0227 KUI_0228 PF09709 KUI_0228 KUI_0229 PF09704 CRISPR-associated protein (Cas_Cas5) KUI_0230 PF13086 AAA domain KUI_0230 PF13087 AAA domain KUI_0231 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KUI_0232 PF00528 Binding-protein-dependent transport system inner membrane component KUI_0233 PF00528 Binding-protein-dependent transport system inner membrane component KUI_0233 PF12911 KUI_0233 KUI_0234 PF00005 ABC transporter KUI_0234 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KUI_0235 PF00005 ABC transporter KUI_0235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KUI_0239 PF01016 Ribosomal L27 protein KUI_0240 PF00829 Ribosomal prokaryotic L21 protein KUI_0241 PF01230 HIT domain KUI_0242 PF00834 Ribulose-phosphate 3 epimerase family KUI_0243 PF03562 MltA specific insert domain KUI_0243 PF06725 3D domain KUI_0244 PF10411 Disulfide bond isomerase protein N-terminus KUI_0244 PF13098 Thioredoxin-like domain KUI_0245 PF08534 Redoxin KUI_0246 PF04972 BON domain KUI_0247 PF13580 SIS domain KUI_0248 PF02021 Uncharacterised protein family UPF0102 KUI_0249 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KUI_0250 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel KUI_0251 PF03668 KUI_0251 KUI_0252 PF02603 HPr Serine kinase N terminus KUI_0252 PF07475 HPr Serine kinase C-terminal domain KUI_0253 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KUI_0254 PF00005 ABC transporter KUI_0254 PF12399 Branched-chain amino acid ATP-binding cassette transporter KUI_0255 PF03968 OstA-like protein KUI_0256 PF06835 Lipopolysaccharide-assembly, LptC-related KUI_0257 PF08282 haloacid dehalogenase-like hydrolase KUI_0258 PF00571 CBS domain KUI_0258 PF01380 SIS domain KUI_0259 PF00156 Phosphoribosyl transferase domain KUI_0260 PF00291 Pyridoxal-phosphate dependent enzyme KUI_0260 PF00585 C-terminal regulatory domain of Threonine dehydratase KUI_0261 PF00512 His Kinase A (phospho-acceptor) domain KUI_0261 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUI_0262 PF00072 Response regulator receiver domain KUI_0262 PF00486 Transcriptional regulatory protein, C terminal KUI_0263 PF01209 ubiE/COQ5 methyltransferase family KUI_0265 PF03109 KUI_0265 KUI_0266 PF01467 Cytidylyltransferase KUI_0267 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) KUI_0268 PF08543 Phosphomethylpyrimidine kinase KUI_0269 PF03976 Polyphosphate kinase 2 (PPK2) KUI_0270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KUI_0270 PF07992 Pyridine nucleotide-disulphide oxidoreductase KUI_0271 PF00710 Asparaginase KUI_0272 PF06508 Queuosine biosynthesis protein QueC KUI_0273 PF01242 6-pyruvoyl tetrahydropterin synthase KUI_0274 PF04055 Radical SAM superfamily KUI_0274 PF13394 4Fe-4S single cluster domain KUI_0275 PF01679 KUI_0275 KUI_0277 PF00881 Nitroreductase family KUI_0279 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KUI_0279 PF01488 Shikimate / quinate 5-dehydrogenase KUI_0279 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KUI_0280 PF00472 RF-1 domain KUI_0280 PF03462 PCRF domain KUI_0281 PF13847 Methyltransferase domain KUI_0282 PF00462 Glutaredoxin KUI_0283 PF02441 Flavoprotein KUI_0284 PF07264 Etoposide-induced protein 2 KUI_0285 PF00939 Sodium:sulfate symporter transmembrane region KUI_0286 PF01266 FAD dependent oxidoreductase KUI_0292 PF00202 Aminotransferase class-III KUI_0293 PF00155 Aminotransferase class I and II KUI_0294 PF04301 KUI_0294 KUI_0295 PF13489 Methyltransferase domain KUI_0296 PF13500 AAA domain KUI_0297 PF03009 Glycerophosphoryl diester phosphodiesterase family KUI_0298 PF00107 Zinc-binding dehydrogenase KUI_0298 PF08240 Alcohol dehydrogenase GroES-like domain KUI_0299 PF11692 KUI_0299 KUI_0300 PF06092 KUI_0300 KUI_0301 PF01169 KUI_0301 KUI_0302 PF04575 KUI_0302 KUI_0303 PF14489 QueF-like protein KUI_0303 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term KUI_0304 PF01298 Transferrin binding protein-like solute binding protein KUI_0304 PF17483 KUI_0304 KUI_0304 PF17484 KUI_0304 KUI_0305 PF00593 TonB dependent receptor KUI_0305 PF07715 TonB-dependent Receptor Plug Domain KUI_0306 PF01171 PP-loop family KUI_0307 PF02152 Dihydroneopterin aldolase KUI_0308 PF07992 Pyridine nucleotide-disulphide oxidoreductase KUI_0309 PF13091 PLD-like domain KUI_0309 PF13396 KUI_0309 KUI_0310 PF00528 Binding-protein-dependent transport system inner membrane component KUI_0311 PF00528 Binding-protein-dependent transport system inner membrane component KUI_0312 PF00497 Bacterial extracellular solute-binding proteins, family 3 KUI_0313 PF06912 KUI_0313 KUI_0314 PF04055 Radical SAM superfamily KUI_0314 PF06968 Biotin and Thiamin Synthesis associated domain KUI_0315 PF00582 Universal stress protein family KUI_0316 PF00929 Exonuclease KUI_0317 PF00929 Exonuclease KUI_0318 PF13561 Enoyl-(Acyl carrier protein) reductase KUI_0320 PF00551 Formyl transferase KUI_0320 PF01842 ACT domain KUI_0323 PF13274 KUI_0323 KUI_0325 PF01510 N-acetylmuramoyl-L-alanine amidase KUI_0327 PF01578 KUI_0327 KUI_0328 PF00448 SRP54-type protein, GTPase domain KUI_0328 PF02881 SRP54-type protein, helical bundle domain KUI_0328 PF02978 Signal peptide binding domain KUI_0329 PF01476 LysM domain KUI_0329 PF04972 BON domain KUI_0330 PF02390 Putative methyltransferase KUI_0331 PF01588 Putative tRNA binding domain KUI_0331 PF08264 Anticodon-binding domain of tRNA KUI_0331 PF09334 tRNA synthetases class I (M) KUI_0333 PF10609 ParA/MinD ATPase like KUI_0334 PF01103 Surface antigen KUI_0334 PF07244 Surface antigen variable number repeat KUI_0334 PF17243 KUI_0334 KUI_0335 PF04357 KUI_0335 KUI_0336 PF00692 dUTPase KUI_0337 PF03486 HI0933-like protein KUI_0338 PF01717 Cobalamin-independent synthase, Catalytic domain KUI_0339 PF01571 Aminomethyltransferase folate-binding domain KUI_0339 PF08669 Glycine cleavage T-protein C-terminal barrel domain KUI_0340 PF01597 Glycine cleavage H-protein KUI_0341 PF02347 Glycine cleavage system P-protein KUI_0342 PF00303 Thymidylate synthase KUI_0343 PF00186 Dihydrofolate reductase KUI_0344 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KUI_0344 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KUI_0344 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KUI_0345 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KUI_0345 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KUI_0345 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KUI_0345 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KUI_0346 PF01565 FAD binding domain KUI_0346 PF02913 FAD linked oxidases, C-terminal domain KUI_0348 PF03550 Outer membrane lipoprotein LolB KUI_0349 PF00288 GHMP kinases N terminal domain KUI_0349 PF08544 GHMP kinases C terminal KUI_0351 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KUI_0351 PF14572 Phosphoribosyl synthetase-associated domain KUI_0352 PF01386 Ribosomal L25p family KUI_0352 PF14693 Ribosomal protein TL5, C-terminal domain KUI_0353 PF03895 YadA-like C-terminal region KUI_0353 PF05658 Head domain of trimeric autotransporter adhesin KUI_0353 PF05662 Coiled stalk of trimeric autotransporter adhesin KUI_0353 PF13018 KUI_0353 KUI_0354 PF03895 YadA-like C-terminal region KUI_0354 PF05662 Coiled stalk of trimeric autotransporter adhesin KUI_0354 PF13018 KUI_0354 KUI_0355 PF03895 YadA-like C-terminal region KUI_0355 PF05662 Coiled stalk of trimeric autotransporter adhesin KUI_0356 PF03895 YadA-like C-terminal region KUI_0356 PF05662 Coiled stalk of trimeric autotransporter adhesin KUI_0358 PF01195 Peptidyl-tRNA hydrolase KUI_0359 PF02517 CAAX protease self-immunity KUI_0360 PF01926 50S ribosome-binding GTPase KUI_0360 PF06071 Protein of unknown function (DUF933) KUI_0362 PF01467 Cytidylyltransferase KUI_0363 PF03602 Conserved hypothetical protein 95 KUI_0364 PF00448 SRP54-type protein, GTPase domain KUI_0364 PF02881 SRP54-type protein, helical bundle domain KUI_0365 PF01928 CYTH domain KUI_0365 PF05235 CHAD domain KUI_0366 PF01047 MarR family KUI_0367 PF00925 GTP cyclohydrolase II KUI_0367 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KUI_0368 PF00885 6,7-dimethyl-8-ribityllumazine synthase KUI_0369 PF01029 NusB family KUI_0370 PF00586 AIR synthase related protein, N-terminal domain KUI_0370 PF02769 AIR synthase related protein, C-terminal domain KUI_0371 PF04608 Phosphatidylglycerophosphatase A KUI_0372 PF02464 Competence-damaged protein KUI_0373 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KUI_0374 PF01219 Prokaryotic diacylglycerol kinase KUI_0375 PF00118 TCP-1/cpn60 chaperonin family KUI_0376 PF00166 Chaperonin 10 Kd subunit KUI_0377 PF00497 Bacterial extracellular solute-binding proteins, family 3 KUI_0379 PF04314 Protein of unknown function (DUF461) KUI_0380 PF00561 alpha/beta hydrolase fold KUI_0381 PF13174 Tetratricopeptide repeat KUI_0381 PF13432 Tetratricopeptide repeat KUI_0382 PF00691 OmpA family KUI_0383 PF04052 TolB amino-terminal domain KUI_0383 PF07676 WD40-like Beta Propeller Repeat KUI_0384 PF13103 TonB C terminal KUI_0385 PF02472 Biopolymer transport protein ExbD/TolR KUI_0386 PF01618 KUI_0386 KUI_0387 PF03061 Thioesterase superfamily KUI_0388 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KUI_0388 PF03129 Anticodon binding domain KUI_0388 PF04073 Aminoacyl-tRNA editing domain KUI_0389 PF00293 NUDIX domain KUI_0390 PF01926 50S ribosome-binding GTPase KUI_0390 PF10396 GTP-binding protein TrmE N-terminus KUI_0390 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE KUI_0392 PF05164 Cell division protein ZapA KUI_0393 PF04402 Protein of unknown function (DUF541) KUI_0394 PF01790 KUI_0394 KUI_0395 PF00171 Aldehyde dehydrogenase family KUI_0395 PF01619 Proline dehydrogenase KUI_0395 PF14850 DNA-binding domain of Proline dehydrogenase KUI_0396 PF00474 Sodium:solute symporter family KUI_0397 PF04072 Leucine carboxyl methyltransferase KUI_0405 PF03895 YadA-like C-terminal region KUI_0405 PF05658 Head domain of trimeric autotransporter adhesin KUI_0405 PF05662 Coiled stalk of trimeric autotransporter adhesin KUI_0406 PF00209 Sodium:neurotransmitter symporter family KUI_0407 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KUI_0407 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KUI_0408 PF00132 Bacterial transferase hexapeptide (six repeats) KUI_0409 PF00534 Glycosyl transferases group 1 KUI_0409 PF13439 Glycosyltransferase Family 4 KUI_0410 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KUI_0411 PF01061 KUI_0411 KUI_0412 PF00005 ABC transporter KUI_0412 PF14524 Wzt C-terminal domain KUI_0413 PF00534 Glycosyl transferases group 1 KUI_0413 PF08241 Methyltransferase domain KUI_0413 PF13439 Glycosyltransferase Family 4 KUI_0414 PF01841 Transglutaminase-like superfamily KUI_0415 PF01841 Transglutaminase-like superfamily KUI_0415 PF06662 KUI_0415 KUI_0416 PF00733 Asparagine synthase KUI_0416 PF13537 Glutamine amidotransferase domain KUI_0418 PF02350 UDP-N-acetylglucosamine 2-epimerase KUI_0419 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KUI_0420 PF02397 KUI_0420 KUI_0421 PF13440 KUI_0421 KUI_0423 PF01757 KUI_0423 KUI_0424 PF02719 Polysaccharide biosynthesis protein KUI_0424 PF13727 CoA-binding domain KUI_0425 PF03971 Monomeric isocitrate dehydrogenase KUI_0426 PF02201 SWIB/MDM2 domain KUI_0427 PF01979 Amidohydrolase family KUI_0428 PF01596 O-methyltransferase KUI_0429 PF05681 KUI_0429 KUI_0429 PF05683 Fumarase C-terminus KUI_0430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KUI_0431 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KUI_0432 PF00528 Binding-protein-dependent transport system inner membrane component KUI_0433 PF00528 Binding-protein-dependent transport system inner membrane component KUI_0433 PF12911 KUI_0433 KUI_0434 PF00005 ABC transporter KUI_0434 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KUI_0435 PF00005 ABC transporter KUI_0435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KUI_0436 PF08240 Alcohol dehydrogenase GroES-like domain KUI_0436 PF13602 Zinc-binding dehydrogenase KUI_0437 PF13508 Acetyltransferase (GNAT) domain KUI_0438 PF00121 Triosephosphate isomerase KUI_0439 PF03840 Preprotein translocase SecG subunit KUI_0441 PF08972 Domain of unknown function (DUF1902) KUI_0442 PF07681 KUI_0442 KUI_0443 PF00127 Copper binding proteins, plastocyanin/azurin family KUI_0444 PF13609 Gram-negative porin KUI_0445 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KUI_0446 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KUI_0447 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KUI_0448 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KUI_0449 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin KUI_0450 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KUI_0450 PF10531 SLBB domain KUI_0450 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KUI_0451 PF00384 Molybdopterin oxidoreductase KUI_0451 PF01568 Molydopterin dinucleotide binding domain KUI_0451 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KUI_0451 PF13510 2Fe-2S iron-sulfur cluster binding domain KUI_0452 PF00146 NADH dehydrogenase KUI_0453 PF12838 4Fe-4S dicluster domain KUI_0454 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KUI_0455 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KUI_0456 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains KUI_0456 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KUI_0457 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains KUI_0458 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains KUI_0459 PF10993 KUI_0459 KUI_0460 PF12710 haloacid dehalogenase-like hydrolase KUI_0461 PF00270 DEAD/DEAH box helicase KUI_0461 PF00271 Helicase conserved C-terminal domain KUI_0461 PF02559 CarD-like/TRCF domain KUI_0461 PF03461 TRCF domain KUI_0462 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KUI_0462 PF02542 YgbB family KUI_0463 PF02627 Carboxymuconolactone decarboxylase family KUI_0464 PF00578 AhpC/TSA family KUI_0465 PF00512 His Kinase A (phospho-acceptor) domain KUI_0465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUI_0465 PF16524 KUI_0465 KUI_0466 PF00072 Response regulator receiver domain KUI_0466 PF00486 Transcriptional regulatory protein, C terminal KUI_0467 PF00583 Acetyltransferase (GNAT) family KUI_0467 PF00814 Glycoprotease family KUI_0468 PF03167 Uracil DNA glycosylase superfamily KUI_0469 PF07690 Major Facilitator Superfamily KUI_0470 PF02463 RecF/RecN/SMC N terminal domain KUI_0471 PF04354 ZipA, C-terminal FtsZ-binding domain KUI_0472 PF00533 BRCA1 C Terminus (BRCT) domain KUI_0472 PF01653 NAD-dependent DNA ligase adenylation domain KUI_0472 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KUI_0472 PF03120 NAD-dependent DNA ligase OB-fold domain KUI_0472 PF12826 Helix-hairpin-helix motif KUI_0473 PF00639 PPIC-type PPIASE domain KUI_0474 PF01722 BolA-like protein KUI_0475 PF04279 KUI_0475 KUI_0476 PF13458 Periplasmic binding protein KUI_0477 PF13458 Periplasmic binding protein KUI_0478 PF13458 Periplasmic binding protein KUI_0479 PF02653 KUI_0479 KUI_0480 PF00005 ABC transporter KUI_0480 PF02653 KUI_0480 KUI_0480 PF12399 Branched-chain amino acid ATP-binding cassette transporter KUI_0481 PF00005 ABC transporter KUI_0482 PF00633 Helix-hairpin-helix motif KUI_0482 PF00730 HhH-GPD superfamily base excision DNA repair protein KUI_0483 PF04060 Putative Fe-S cluster KUI_0483 PF14697 4Fe-4S dicluster domain KUI_0484 PF00175 Oxidoreductase NAD-binding domain KUI_0485 PF00037 4Fe-4S binding domain KUI_0485 PF11953 Domain of unknown function (DUF3470) KUI_0485 PF12800 4Fe-4S binding domain KUI_0486 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KUI_0487 PF02824 TGS domain KUI_0487 PF04607 Region found in RelA / SpoT proteins KUI_0487 PF13291 ACT domain KUI_0487 PF13328 HD domain KUI_0488 PF01039 Carboxyl transferase domain KUI_0489 PF00575 S1 RNA binding domain KUI_0489 PF10150 Ribonuclease E/G family KUI_0490 PF00849 RNA pseudouridylate synthase KUI_0490 PF01479 S4 domain KUI_0491 PF13419 Haloacid dehalogenase-like hydrolase KUI_0493 PF02545 Maf-like protein KUI_0494 PF02620 KUI_0494 KUI_0495 PF01783 Ribosomal L32p protein family KUI_0496 PF02504 Fatty acid synthesis protein KUI_0497 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KUI_0497 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KUI_0498 PF00698 Acyl transferase domain KUI_0499 PF13561 Enoyl-(Acyl carrier protein) reductase KUI_0500 PF00550 Phosphopantetheine attachment site KUI_0501 PF00109 Beta-ketoacyl synthase, N-terminal domain KUI_0501 PF02801 Beta-ketoacyl synthase, C-terminal domain KUI_0503 PF13180 PDZ domain KUI_0503 PF13365 Trypsin-like peptidase domain KUI_0504 PF00009 Elongation factor Tu GTP binding domain KUI_0504 PF00679 Elongation factor G C-terminus KUI_0504 PF03144 Elongation factor Tu domain 2 KUI_0504 PF06421 GTP-binding protein LepA C-terminus KUI_0505 PF00717 Peptidase S24-like KUI_0505 PF10502 Signal peptidase, peptidase S26 KUI_0506 PF00035 Double-stranded RNA binding motif KUI_0506 PF14622 Ribonuclease-III-like KUI_0507 PF01926 50S ribosome-binding GTPase KUI_0507 PF07650 KH domain KUI_0508 PF02565 Recombination protein O C terminal KUI_0508 PF11967 Recombination protein O N terminal KUI_0509 PF01027 Inhibitor of apoptosis-promoting Bax1 KUI_0509 PF05684 KUI_0509 KUI_0510 PF04364 DNA polymerase III chi subunit, HolC KUI_0511 PF00883 Cytosol aminopeptidase family, catalytic domain KUI_0512 PF03739 KUI_0512 KUI_0513 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUI_0513 PF03466 LysR substrate binding domain KUI_0514 PF00440 Bacterial regulatory proteins, tetR family KUI_0515 PF10087 KUI_0515 KUI_0517 PF00877 NlpC/P60 family KUI_0518 PF01946 Thi4 family KUI_0518 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase KUI_0519 PF00557 Metallopeptidase family M24 KUI_0519 PF01321 Creatinase/Prolidase N-terminal domain KUI_0519 PF16188 KUI_0519 KUI_0519 PF16189 KUI_0519 KUI_0521 PF00471 Ribosomal protein L33 KUI_0522 PF00830 Ribosomal L28 family KUI_0523 PF01554 MatE KUI_0525 PF01197 Ribosomal protein L31 KUI_0526 PF04002 RadC-like JAB domain KUI_0527 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KUI_0528 PF02401 LytB protein KUI_0529 PF02545 Maf-like protein KUI_0530 PF02590 Predicted SPOUT methyltransferase KUI_0531 PF02410 Oligomerisation domain KUI_0532 PF01467 Cytidylyltransferase KUI_0533 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KUI_0533 PF02843 Phosphoribosylglycinamide synthetase, C domain KUI_0533 PF02844 Phosphoribosylglycinamide synthetase, N domain KUI_0534 PF01709 Transcriptional regulator KUI_0535 PF05872 KUI_0535 KUI_0536 PF00316 Fructose-1-6-bisphosphatase KUI_0537 PF01433 Peptidase family M1 KUI_0537 PF11940 Domain of unknown function (DUF3458) KUI_0537 PF17432 KUI_0537 KUI_0538 PF01523 Putative modulator of DNA gyrase KUI_0539 PF03054 tRNA methyl transferase KUI_0540 PF00206 Lyase KUI_0540 PF08328 Adenylosuccinate lyase C-terminal KUI_0541 PF01322 Cytochrome C' KUI_0545 PF01645 Conserved region in glutamate synthase KUI_0547 PF00545 ribonuclease KUI_0548 PF01337 Barstar (barnase inhibitor) KUI_0550 PF00005 ABC transporter KUI_0550 PF12848 ABC transporter KUI_0550 PF16326 KUI_0550 KUI_0551 PF01471 Putative peptidoglycan binding domain KUI_0551 PF13406 Transglycosylase SLT domain KUI_0552 PF00595 PDZ domain (Also known as DHR or GLGF) KUI_0552 PF03572 Peptidase family S41 KUI_0552 PF11818 KUI_0552 KUI_0553 PF04321 RmlD substrate binding domain KUI_0554 PF13419 Haloacid dehalogenase-like hydrolase KUI_0555 PF13489 Methyltransferase domain KUI_0556 PF00691 OmpA family KUI_0557 PF00521 DNA gyrase/topoisomerase IV, subunit A KUI_0557 PF03989 DNA gyrase C-terminal domain, beta-propeller KUI_0558 PF00266 Aminotransferase class-V KUI_0559 PF00800 Prephenate dehydratase KUI_0559 PF01817 Chorismate mutase type II KUI_0560 PF02153 Prephenate dehydrogenase KUI_0561 PF02224 Cytidylate kinase KUI_0562 PF00575 S1 RNA binding domain KUI_0563 PF00216 Bacterial DNA-binding protein KUI_0564 PF06305 KUI_0564 KUI_0566 PF00294 pfkB family carbohydrate kinase KUI_0567 PF12836 Helix-hairpin-helix motif KUI_0568 PF00122 E1-E2 ATPase KUI_0569 PF03597 KUI_0569 KUI_0570 PF00115 Cytochrome C and Quinol oxidase polypeptide I KUI_0571 PF02433 Cytochrome C oxidase, mono-heme subunit/FixO KUI_0572 PF05545 KUI_0572 KUI_0573 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KUI_0573 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP KUI_0574 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase KUI_0574 PF12801 KUI_0574 KUI_0574 PF13746 4Fe-4S dicluster domain KUI_0575 PF05751 KUI_0575 KUI_0576 PF00027 Cyclic nucleotide-binding domain KUI_0576 PF13545 Crp-like helix-turn-helix domain KUI_0577 PF07811 KUI_0577 KUI_0578 PF01430 Hsp33 protein KUI_0579 PF00132 Bacterial transferase hexapeptide (six repeats) KUI_0580 PF00501 AMP-binding enzyme KUI_0581 PF06271 KUI_0581 KUI_0582 PF01170 Putative RNA methylase family UPF0020 KUI_0582 PF02926 THUMP domain KUI_0583 PF03653 KUI_0583 KUI_0584 PF06144 DNA polymerase III, delta subunit KUI_0585 PF04390 Lipopolysaccharide-assembly KUI_0586 PF00133 tRNA synthetases class I (I, L, M and V) KUI_0586 PF08264 Anticodon-binding domain of tRNA KUI_0586 PF09334 tRNA synthetases class I (M) KUI_0586 PF13603 Leucyl-tRNA synthetase, Domain 2 KUI_0587 PF01546 Peptidase family M20/M25/M40 KUI_0588 PF08007 Cupin superfamily protein KUI_0589 PF00488 MutS domain V KUI_0589 PF01624 MutS domain I KUI_0589 PF05188 MutS domain II KUI_0589 PF05190 MutS family domain IV KUI_0589 PF05192 MutS domain III KUI_0590 PF00924 Mechanosensitive ion channel KUI_0590 PF05552 Conserved TM helix KUI_0591 PF00588 SpoU rRNA Methylase family KUI_0592 PF00459 Inositol monophosphatase family KUI_0593 PF02673 KUI_0593 KUI_0594 PF00149 Calcineurin-like phosphoesterase KUI_0595 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KUI_0596 PF00515 Tetratricopeptide repeat KUI_0596 PF13174 Tetratricopeptide repeat KUI_0597 PF01406 tRNA synthetases class I (C) catalytic domain KUI_0597 PF09190 DALR domain KUI_0598 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KUI_0599 PF01171 PP-loop family KUI_0599 PF09179 TilS substrate binding domain KUI_0601 PF05154 KUI_0601 KUI_0602 PF16868 KUI_0602 KUI_0603 PF08905 KUI_0603 KUI_0604 PF06808 KUI_0604 KUI_0606 PF00005 ABC transporter KUI_0606 PF06472 KUI_0606 KUI_0607 PF00593 TonB dependent receptor KUI_0607 PF07715 TonB-dependent Receptor Plug Domain KUI_0608 PF00696 Amino acid kinase family KUI_0608 PF01842 ACT domain KUI_0608 PF13840 ACT domain KUI_0609 PF06676 KUI_0609 KUI_0610 PF04461 Protein of unknown function (DUF520) KUI_0611 PF01132 Elongation factor P (EF-P) OB domain KUI_0611 PF08207 Elongation factor P (EF-P) KOW-like domain KUI_0611 PF09285 Elongation factor P, C-terminal KUI_0612 PF10093 KUI_0612 KUI_0613 PF00155 Aminotransferase class I and II KUI_0614 PF00330 Aconitase family (aconitate hydratase) KUI_0614 PF06434 Aconitate hydratase 2 N-terminus KUI_0614 PF11791 Aconitate B N-terminal domain KUI_0617 PF00579 tRNA synthetases class I (W and Y) KUI_0618 PF01427 D-ala-D-ala dipeptidase KUI_0619 PF01569 PAP2 superfamily KUI_0620 PF13528 Glycosyl transferase family 1 KUI_0621 PF01964 ThiC family KUI_0621 PF13667 ThiC-associated domain KUI_0623 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KUI_0623 PF07497 Rho termination factor, RNA-binding domain KUI_0623 PF07498 Rho termination factor, N-terminal domain KUI_0624 PF00085 Thioredoxin KUI_0625 PF00204 DNA gyrase B KUI_0625 PF00986 DNA gyrase B subunit, carboxyl terminus KUI_0625 PF01751 Toprim domain KUI_0625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUI_0626 PF00521 DNA gyrase/topoisomerase IV, subunit A KUI_0627 PF00111 2Fe-2S iron-sulfur cluster binding domain KUI_0627 PF00175 Oxidoreductase NAD-binding domain KUI_0627 PF00970 Oxidoreductase FAD-binding domain KUI_0628 PF03524 Conjugal transfer protein KUI_0629 PF01411 tRNA synthetases class II (A) KUI_0629 PF02272 DHHA1 domain KUI_0629 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KUI_0630 PF01206 Sulfurtransferase TusA KUI_0631 PF00886 Ribosomal protein S16 KUI_0632 PF01782 RimM N-terminal domain KUI_0633 PF01746 tRNA (Guanine-1)-methyltransferase KUI_0634 PF01451 Low molecular weight phosphotyrosine protein phosphatase KUI_0635 PF02082 Transcriptional regulator KUI_0636 PF00266 Aminotransferase class-V KUI_0637 PF01592 NifU-like N terminal domain KUI_0638 PF01521 Iron-sulphur cluster biosynthesis KUI_0639 PF07743 HSCB C-terminal oligomerisation domain KUI_0640 PF00012 Hsp70 protein KUI_0641 PF00111 2Fe-2S iron-sulfur cluster binding domain KUI_0642 PF08238 Sel1 repeat KUI_0643 PF08238 Sel1 repeat KUI_0644 PF08238 Sel1 repeat KUI_0645 PF08238 Sel1 repeat KUI_0646 PF00152 tRNA synthetases class II (D, K and N) KUI_0646 PF01336 OB-fold nucleic acid binding domain KUI_0647 PF00472 RF-1 domain KUI_0647 PF03462 PCRF domain KUI_0648 PF01368 DHH family KUI_0648 PF02272 DHHA1 domain KUI_0650 PF02687 KUI_0650 KUI_0650 PF12704 MacB-like periplasmic core domain KUI_0651 PF00005 ABC transporter KUI_0652 PF01494 FAD binding domain KUI_0653 PF01026 TatD related DNase KUI_0654 PF00753 Metallo-beta-lactamase superfamily KUI_0654 PF03772 KUI_0654 KUI_0654 PF13567 KUI_0654 KUI_0655 PF02811 PHP domain KUI_0656 PF01272 Transcription elongation factor, GreA/GreB, C-term KUI_0656 PF03449 Transcription elongation factor, N-terminal KUI_0657 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ KUI_0658 PF13145 PPIC-type PPIASE domain KUI_0658 PF13624 SurA N-terminal domain KUI_0659 PF01632 Ribosomal protein L35 KUI_0660 PF00453 Ribosomal protein L20 KUI_0661 PF01409 tRNA synthetases class II core domain (F) KUI_0661 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KUI_0662 PF01588 Putative tRNA binding domain KUI_0662 PF03147 Ferredoxin-fold anticodon binding domain KUI_0662 PF03483 B3/4 domain KUI_0662 PF03484 tRNA synthetase B5 domain KUI_0663 PF00216 Bacterial DNA-binding protein KUI_0664 PF13411 MerR HTH family regulatory protein KUI_0665 PF01177 Asp/Glu/Hydantoin racemase KUI_0666 PF01070 FMN-dependent dehydrogenase KUI_0667 PF00291 Pyridoxal-phosphate dependent enzyme KUI_0669 PF00580 UvrD/REP helicase N-terminal domain KUI_0669 PF13361 UvrD-like helicase C-terminal domain KUI_0671 PF09424 Yqey-like protein KUI_0673 PF00768 D-alanyl-D-alanine carboxypeptidase KUI_0674 PF02769 AIR synthase related protein, C-terminal domain KUI_0674 PF13507 CobB/CobQ-like glutamine amidotransferase domain KUI_0675 PF00478 IMP dehydrogenase / GMP reductase domain KUI_0675 PF00571 CBS domain KUI_0676 PF05940 KUI_0676 KUI_0677 PF00117 Glutamine amidotransferase class-I KUI_0677 PF00958 GMP synthase C terminal domain KUI_0677 PF02540 NAD synthase KUI_0680 PF16868 KUI_0680 KUI_0681 PF08238 Sel1 repeat KUI_0682 PF12643 KUI_0682 KUI_0683 PF09848 Uncharacterized conserved protein (DUF2075) KUI_0685 PF00474 Sodium:solute symporter family KUI_0686 PF03806 KUI_0686 KUI_0687 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KUI_0688 PF00857 Isochorismatase family KUI_0689 PF07690 Major Facilitator Superfamily KUI_0690 PF05940 KUI_0690 KUI_0691 PF00005 ABC transporter KUI_0692 PF00528 Binding-protein-dependent transport system inner membrane component KUI_0694 PF00593 TonB dependent receptor KUI_0694 PF07715 TonB-dependent Receptor Plug Domain KUI_0696 PF04575 KUI_0696 KUI_0697 PF00005 ABC transporter KUI_0697 PF00664 ABC transporter transmembrane region KUI_0698 PF00005 ABC transporter KUI_0698 PF00664 ABC transporter transmembrane region KUI_0699 PF03616 KUI_0699 KUI_0700 PF16695 KUI_0700 KUI_0701 PF14113 Domain of unknown function (DUF4285) KUI_0702 PF00390 Malic enzyme, N-terminal domain KUI_0702 PF01515 Phosphate acetyl/butaryl transferase KUI_0702 PF03949 Malic enzyme, NAD binding domain KUI_0703 PF00676 Dehydrogenase E1 component KUI_0703 PF02779 Transketolase, pyrimidine binding domain KUI_0703 PF16078 KUI_0703 KUI_0703 PF16870 KUI_0703 KUI_0704 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KUI_0704 PF00364 Biotin-requiring enzyme KUI_0704 PF02817 e3 binding domain KUI_0705 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KUI_0705 PF07992 Pyridine nucleotide-disulphide oxidoreductase KUI_0706 PF03969 AFG1-like ATPase KUI_0707 PF01078 Magnesium chelatase, subunit ChlI KUI_0707 PF13335 KUI_0707 KUI_0707 PF13541 Subunit ChlI of Mg-chelatase KUI_0708 PF03180 NLPA lipoprotein KUI_0710 PF02824 TGS domain KUI_0710 PF04607 Region found in RelA / SpoT proteins KUI_0710 PF13291 ACT domain KUI_0710 PF13328 HD domain KUI_0711 PF01192 RNA polymerase Rpb6 KUI_0712 PF00625 Guanylate kinase KUI_0713 PF02562 PhoH-like protein KUI_0713 PF13638 PIN domain KUI_0714 PF00578 AhpC/TSA family KUI_0715 PF04430 Protein of unknown function (DUF498/DUF598) KUI_0716 PF00742 Homoserine dehydrogenase KUI_0716 PF01842 ACT domain KUI_0716 PF03447 Homoserine dehydrogenase, NAD binding domain KUI_0717 PF14821 Threonine synthase N terminus KUI_0718 PF00494 Squalene/phytoene synthase KUI_0719 PF00842 Alanine racemase, C-terminal domain KUI_0719 PF01168 Alanine racemase, N-terminal domain KUI_0720 PF13481 AAA domain KUI_0720 PF13541 Subunit ChlI of Mg-chelatase KUI_0721 PF13416 Bacterial extracellular solute-binding protein KUI_0722 PF00005 ABC transporter KUI_0722 PF08402 TOBE domain KUI_0723 PF00528 Binding-protein-dependent transport system inner membrane component KUI_0724 PF00528 Binding-protein-dependent transport system inner membrane component KUI_0725 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KUI_0726 PF01895 PhoU domain KUI_0727 PF04362 Bacterial Fe(2+) trafficking KUI_0728 PF00271 Helicase conserved C-terminal domain KUI_0728 PF04408 Helicase associated domain (HA2) KUI_0728 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold KUI_0728 PF11898 KUI_0728 KUI_0729 PF02811 PHP domain KUI_0729 PF07733 Bacterial DNA polymerase III alpha subunit KUI_0729 PF14579 Helix-hairpin-helix motif KUI_0730 PF01075 Glycosyltransferase family 9 (heptosyltransferase) KUI_0731 PF00005 ABC transporter KUI_0731 PF00664 ABC transporter transmembrane region KUI_0732 PF10150 Ribonuclease E/G family KUI_0733 PF01227 GTP cyclohydrolase I KUI_0739 PF00565 Staphylococcal nuclease homologue KUI_0740 PF00881 Nitroreductase family KUI_0741 PF03544 Gram-negative bacterial TonB protein C-terminal KUI_0742 PF01618 KUI_0742 KUI_0743 PF02472 Biopolymer transport protein ExbD/TolR KUI_0744 PF05154 KUI_0744 KUI_0745 PF04305 KUI_0745 KUI_0746 PF00005 ABC transporter KUI_0746 PF06472 KUI_0746 KUI_0747 PF13673 Acetyltransferase (GNAT) domain KUI_0748 PF04247 KUI_0748 KUI_0749 PF01925 KUI_0749 KUI_0750 PF00575 S1 RNA binding domain KUI_0750 PF00773 RNB domain KUI_0750 PF08206 Ribonuclease B OB domain KUI_0751 PF00588 SpoU rRNA Methylase family KUI_0751 PF08032 RNA 2'-O ribose methyltransferase substrate binding KUI_0752 PF01053 Cys/Met metabolism PLP-dependent enzyme KUI_0753 PF00216 Bacterial DNA-binding protein KUI_0754 PF13437 HlyD family secretion protein KUI_0754 PF13533 Biotin-lipoyl like KUI_0755 PF00005 ABC transporter KUI_0755 PF12698 ABC-2 family transporter protein KUI_0756 PF12698 ABC-2 family transporter protein KUI_0757 PF02321 Outer membrane efflux protein KUI_0759 PF00764 Arginosuccinate synthase KUI_0760 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KUI_0760 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KUI_0761 PF12112 Protein of unknown function (DUF3579) KUI_0762 PF01649 Ribosomal protein S20 KUI_0763 PF03023 KUI_0763 KUI_0764 PF00406 Adenylate kinase KUI_0764 PF05191 Adenylate kinase, active site lid KUI_0765 PF02348 Cytidylyltransferase KUI_0766 PF03966 Trm112p-like protein KUI_0767 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KUI_0768 PF02601 KUI_0768 KUI_0768 PF13742 KUI_0768 KUI_0769 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KUI_0769 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KUI_0770 PF13458 Periplasmic binding protein KUI_0771 PF03807 NADP oxidoreductase coenzyme F420-dependent KUI_0771 PF14748 Pyrroline-5-carboxylate reductase dimerisation KUI_0772 PF02653 KUI_0772 KUI_0773 PF02653 KUI_0773 KUI_0773 PF11862 KUI_0773 KUI_0774 PF00005 ABC transporter KUI_0774 PF12399 Branched-chain amino acid ATP-binding cassette transporter KUI_0775 PF00005 ABC transporter KUI_0776 PF02630 SCO1/SenC KUI_0777 PF01432 Peptidase family M3 KUI_0778 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KUI_0778 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KUI_0779 PF00072 Response regulator receiver domain KUI_0779 PF00196 Bacterial regulatory proteins, luxR family KUI_0780 PF00512 His Kinase A (phospho-acceptor) domain KUI_0780 PF00989 PAS fold KUI_0780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUI_0780 PF13188 PAS domain KUI_0781 PF00456 Transketolase, thiamine diphosphate binding domain KUI_0782 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KUI_0782 PF00364 Biotin-requiring enzyme KUI_0782 PF02817 e3 binding domain KUI_0783 PF00364 Biotin-requiring enzyme KUI_0783 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KUI_0783 PF07992 Pyridine nucleotide-disulphide oxidoreductase KUI_0784 PF01292 Prokaryotic cytochrome b561 KUI_0785 PF08245 Mur ligase middle domain KUI_0786 PF05036 Sporulation related domain KUI_0787 PF02674 KUI_0787 KUI_0788 PF00156 Phosphoribosyl transferase domain KUI_0788 PF13537 Glutamine amidotransferase domain KUI_0789 PF02423 Ornithine cyclodeaminase/mu-crystallin family KUI_0790 PF02600 Disulfide bond formation protein DsbB KUI_0791 PF01914 KUI_0791 KUI_0792 PF01966 HD domain KUI_0792 PF08335 GlnD PII-uridylyltransferase KUI_0793 PF00557 Metallopeptidase family M24 KUI_0794 PF00318 Ribosomal protein S2 KUI_0795 PF00889 Elongation factor TS KUI_0796 PF00696 Amino acid kinase family KUI_0797 PF01765 Ribosome recycling factor KUI_0798 PF01255 Putative undecaprenyl diphosphate synthase KUI_0799 PF01148 Cytidylyltransferase family KUI_0800 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KUI_0800 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal KUI_0800 PF13288 DXP reductoisomerase C-terminal domain KUI_0801 PF02163 Peptidase family M50 KUI_0801 PF13180 PDZ domain KUI_0802 PF01103 Surface antigen KUI_0802 PF07244 Surface antigen variable number repeat KUI_0803 PF03938 Outer membrane protein (OmpH-like) KUI_0804 PF00132 Bacterial transferase hexapeptide (six repeats) KUI_0804 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KUI_0805 PF07977 FabA-like domain KUI_0806 PF00132 Bacterial transferase hexapeptide (six repeats) KUI_0806 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KUI_0807 PF02684 KUI_0807 KUI_0808 PF01351 Ribonuclease HII KUI_0809 PF00487 KUI_0809 KUI_0810 PF00588 SpoU rRNA Methylase family KUI_0811 PF03618 KUI_0811 KUI_0812 PF00391 PEP-utilising enzyme, mobile domain KUI_0812 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KUI_0812 PF02896 PEP-utilising enzyme, TIM barrel domain KUI_0814 PF01145 SPFH domain / Band 7 family KUI_0814 PF16200 KUI_0814 KUI_0815 PF01668 SmpB protein KUI_0816 PF03364 Polyketide cyclase / dehydrase and lipid transport KUI_0817 PF03658 RnfH family Ubiquitin KUI_0819 PF02618 YceG-like family KUI_0820 PF02223 Thymidylate kinase KUI_0821 PF13177 DNA polymerase III, delta subunit KUI_0822 PF01026 TatD related DNase KUI_0823 PF12796 Ankyrin repeats (3 copies) KUI_0824 PF03334 KUI_0824 KUI_0825 PF04066 KUI_0825 KUI_0826 PF01899 KUI_0826 KUI_0827 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains KUI_0828 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KUI_0829 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains KUI_0829 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KUI_0829 PF04039 KUI_0829 KUI_0829 PF13244 KUI_0829 KUI_0831 PF16576 KUI_0831 KUI_0832 PF00873 AcrB/AcrD/AcrF family KUI_0833 PF02321 Outer membrane efflux protein KUI_0834 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KUI_0835 PF00881 Nitroreductase family KUI_0836 PF00171 Aldehyde dehydrogenase family KUI_0837 PF02321 Outer membrane efflux protein KUI_0838 PF00873 AcrB/AcrD/AcrF family KUI_0839 PF00873 AcrB/AcrD/AcrF family KUI_0840 PF13437 HlyD family secretion protein KUI_0840 PF13533 Biotin-lipoyl like KUI_0841 PF00892 EamA-like transporter family KUI_0843 PF03401 Tripartite tricarboxylate transporter family receptor KUI_0845 PF03372 Endonuclease/Exonuclease/phosphatase family KUI_0847 PF00849 RNA pseudouridylate synthase KUI_0847 PF01479 S4 domain KUI_0848 PF00543 Nitrogen regulatory protein P-II KUI_0849 PF02540 NAD synthase KUI_0850 PF00206 Lyase KUI_0850 PF14698 Argininosuccinate lyase C-terminal KUI_0851 PF01075 Glycosyltransferase family 9 (heptosyltransferase) KUI_0852 PF02631 RecX family KUI_0853 PF00154 recA bacterial DNA recombination protein KUI_0854 PF04381 Putative exonuclease, RdgC KUI_0856 PF00271 Helicase conserved C-terminal domain KUI_0856 PF02151 UvrB/uvrC motif KUI_0856 PF04851 Type III restriction enzyme, res subunit KUI_0856 PF12344 Ultra-violet resistance protein B KUI_0857 PF00155 Aminotransferase class I and II KUI_0858 PF00717 Peptidase S24-like KUI_0858 PF01726 LexA DNA binding domain KUI_0859 PF06808 KUI_0859 KUI_0859 PF11874 KUI_0859 KUI_0860 PF16868 KUI_0860 KUI_0862 PF01594 KUI_0862 KUI_0867 PF00132 Bacterial transferase hexapeptide (six repeats) KUI_0867 PF14602 Hexapeptide repeat of succinyl-transferase KUI_0867 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal KUI_0868 PF01546 Peptidase family M20/M25/M40 KUI_0868 PF07687 Peptidase dimerisation domain KUI_0869 PF05175 Methyltransferase small domain KUI_0870 PF00005 ABC transporter KUI_0870 PF12848 ABC transporter KUI_0871 PF00005 ABC transporter KUI_0872 PF02653 KUI_0872 KUI_0873 PF04392 ABC transporter substrate binding protein KUI_0874 PF01416 tRNA pseudouridine synthase KUI_0875 PF01118 Semialdehyde dehydrogenase, NAD binding domain KUI_0875 PF02774 Semialdehyde dehydrogenase, dimerisation domain KUI_0876 PF00180 Isocitrate/isopropylmalate dehydrogenase KUI_0877 PF00694 Aconitase C-terminal domain KUI_0878 PF00330 Aconitase family (aconitate hydratase) KUI_0879 PF09842 KUI_0879 KUI_0880 PF03631 KUI_0880 KUI_0881 PF00268 Ribonucleotide reductase, small chain KUI_0882 PF00317 Ribonucleotide reductase, all-alpha domain KUI_0882 PF02867 Ribonucleotide reductase, barrel domain KUI_0882 PF03477 ATP cone domain KUI_0883 PF01207 Dihydrouridine synthase (Dus) KUI_0884 PF00571 CBS domain KUI_0884 PF00654 Voltage gated chloride channel KUI_0885 PF01636 Phosphotransferase enzyme family KUI_0887 PF00766 Electron transfer flavoprotein FAD-binding domain KUI_0887 PF01012 Electron transfer flavoprotein domain KUI_0888 PF01012 Electron transfer flavoprotein domain KUI_0889 PF01066 CDP-alcohol phosphatidyltransferase KUI_0890 PF01541 GIY-YIG catalytic domain KUI_0890 PF02151 UvrB/uvrC motif KUI_0890 PF08459 UvrC Helix-hairpin-helix N-terminal KUI_0890 PF14520 Helix-hairpin-helix domain KUI_0891 PF00933 Glycosyl hydrolase family 3 N terminal domain KUI_0892 PF01648 4'-phosphopantetheinyl transferase superfamily KUI_0893 PF00929 Exonuclease KUI_0894 PF03193 Protein of unknown function, DUF258 KUI_0895 PF01245 Ribosomal protein L19 KUI_0897 PF02643 Uncharacterized ACR, COG1430 KUI_0898 PF00482 Type II secretion system (T2SS), protein F KUI_0899 PF00482 Type II secretion system (T2SS), protein F KUI_0900 PF00437 Type II/IV secretion system protein KUI_0900 PF00498 FHA domain KUI_0901 PF00263 KUI_0901 KUI_0901 PF13629 KUI_0901 KUI_0902 PF08666 SAF domain KUI_0902 PF16976 KUI_0902 KUI_0905 PF13400 KUI_0905 KUI_0907 PF03167 Uracil DNA glycosylase superfamily KUI_0909 PF08238 Sel1 repeat KUI_0910 PF00140 Sigma-70 factor, region 1 KUI_0910 PF03979 Sigma-70 factor, region 1 KUI_0910 PF04539 Sigma-70 region 3 KUI_0910 PF04542 Sigma-70 region 2 KUI_0910 PF04545 Sigma-70, region 4 KUI_0910 PF04546 Sigma-70, non-essential region KUI_0911 PF01807 CHC2 zinc finger KUI_0911 PF08275 DNA primase catalytic core, N-terminal domain KUI_0911 PF10410 DnaB-helicase binding domain of primase KUI_0911 PF13155 Toprim-like KUI_0912 PF01165 Ribosomal protein S21 KUI_0913 PF00156 Phosphoribosyl transferase domain KUI_0914 PF00709 Adenylosuccinate synthetase KUI_0915 PF01145 SPFH domain / Band 7 family KUI_0916 PF01145 SPFH domain / Band 7 family KUI_0916 PF12221 KUI_0916 KUI_0917 PF01926 50S ribosome-binding GTPase KUI_0917 PF13167 KUI_0917 KUI_0917 PF16360 KUI_0917 KUI_0918 PF17209 KUI_0918 KUI_0919 PF01926 50S ribosome-binding GTPase KUI_0919 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KUI_0920 PF13360 PQQ-like domain KUI_0921 PF09976 Tetratricopeptide repeat KUI_0922 PF03129 Anticodon binding domain KUI_0922 PF13393 Histidyl-tRNA synthetase KUI_0923 PF04551 GcpE protein KUI_0924 PF13413 Helix-turn-helix domain KUI_0925 PF04055 Radical SAM superfamily KUI_0925 PF13394 4Fe-4S single cluster domain KUI_0926 PF00334 Nucleoside diphosphate kinase KUI_0927 PF00133 tRNA synthetases class I (I, L, M and V) KUI_0927 PF08264 Anticodon-binding domain of tRNA KUI_0927 PF10458 Valyl tRNA synthetase tRNA binding arm KUI_0928 PF17274 KUI_0928 KUI_0929 PF00719 Inorganic pyrophosphatase KUI_0930 PF07219 KUI_0930 KUI_0931 PF04375 KUI_0931 KUI_0932 PF02602 Uroporphyrinogen-III synthase HemD KUI_0933 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KUI_0933 PF03900 Porphobilinogen deaminase, C-terminal domain KUI_0934 PF03741 KUI_0934 KUI_0935 PF00549 CoA-ligase KUI_0935 PF02629 CoA binding domain KUI_0936 PF00549 CoA-ligase KUI_0936 PF08442 ATP-grasp domain KUI_0937 PF11136 KUI_0937 KUI_0938 PF01019 Gamma-glutamyltranspeptidase KUI_0939 PF08713 DNA alkylation repair enzyme KUI_0940 PF05958 tRNA (Uracil-5-)-methyltransferase KUI_0942 PF01476 LysM domain KUI_0942 PF01551 Peptidase family M23 KUI_0943 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) KUI_0944 PF01975 Survival protein SurE KUI_0945 PF02660 KUI_0945 KUI_0946 PF00814 Glycoprotease family KUI_0947 PF00860 Permease family KUI_0948 PF01205 Uncharacterized protein family UPF0029 KUI_0949 PF00005 ABC transporter KUI_0949 PF12848 ABC transporter KUI_0950 PF02016 LD-carboxypeptidase KUI_0951 PF14437 KUI_0951 KUI_0952 PF00145 C-5 cytosine-specific DNA methylase KUI_0954 PF00145 C-5 cytosine-specific DNA methylase KUI_0955 PF02678 Pirin KUI_0955 PF05726 Pirin C-terminal cupin domain KUI_0956 PF01047 MarR family KUI_0957 PF00593 TonB dependent receptor KUI_0957 PF07715 TonB-dependent Receptor Plug Domain KUI_0958 PF00842 Alanine racemase, C-terminal domain KUI_0958 PF01168 Alanine racemase, N-terminal domain KUI_0959 PF08238 Sel1 repeat KUI_0961 PF08238 Sel1 repeat KUI_0962 PF03992 Antibiotic biosynthesis monooxygenase KUI_0963 PF02492 CobW/HypB/UreG, nucleotide-binding domain KUI_0963 PF07683 Cobalamin synthesis protein cobW C-terminal domain KUI_0965 PF01522 Polysaccharide deacetylase KUI_0966 PF00005 ABC transporter KUI_0966 PF08402 TOBE domain KUI_0967 PF00528 Binding-protein-dependent transport system inner membrane component KUI_0968 PF13343 Bacterial extracellular solute-binding protein KUI_0972 PF00285 Citrate synthase KUI_0973 PF03937 Flavinator of succinate dehydrogenase KUI_0974 PF13085 2Fe-2S iron-sulfur cluster binding domain KUI_0974 PF13534 4Fe-4S dicluster domain KUI_0975 PF00890 FAD binding domain KUI_0975 PF02910 Fumarate reductase flavoprotein C-term KUI_0976 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KUI_0977 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KUI_0978 PF00056 lactate/malate dehydrogenase, NAD binding domain KUI_0978 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KUI_0979 PF00171 Aldehyde dehydrogenase family KUI_0980 PF01323 DSBA-like thioredoxin domain KUI_0981 PF14542 GCN5-related N-acetyl-transferase KUI_0982 PF15428 KUI_0982 KUI_0983 PF14078 KUI_0983 KUI_0984 PF15428 KUI_0984 KUI_0985 PF03527 KUI_0985 KUI_0987 PF15571 KUI_0987 KUI_0988 PF03527 KUI_0988 KUI_0988 PF15653 KUI_0988 KUI_0989 PF12796 Ankyrin repeats (3 copies) KUI_0990 PF03527 KUI_0990 KUI_0990 PF14410 KUI_0990 KUI_0991 PF11042 KUI_0991 KUI_0993 PF14136 KUI_0993 KUI_0994 PF14412 KUI_0994 KUI_0996 PF15570 KUI_0996 KUI_0997 PF03527 KUI_0997 KUI_0997 PF05593 KUI_0997 KUI_0997 PF05954 Phage late control gene D protein (GPD) KUI_0997 PF14412 KUI_0997 KUI_0998 PF13599 Pentapeptide repeats (9 copies) KUI_0999 PF09937 KUI_0999 KUI_0999 PF13599 Pentapeptide repeats (9 copies) KUI_1000 PF05954 Phage late control gene D protein (GPD) KUI_1001 PF13665 KUI_1001 KUI_1002 PF05954 Phage late control gene D protein (GPD) KUI_1003 PF12059 KUI_1003 KUI_1004 PF04380 KUI_1004 KUI_1005 PF00004 ATPase family associated with various cellular activities (AAA) KUI_1005 PF02861 Clp amino terminal domain KUI_1005 PF07724 AAA domain (Cdc48 subfamily) KUI_1005 PF10431 C-terminal, D2-small domain, of ClpB protein KUI_1006 PF13470 KUI_1006 KUI_1007 PF04977 Septum formation initiator KUI_1008 PF00113 Enolase, C-terminal TIM barrel domain KUI_1008 PF03952 Enolase, N-terminal domain KUI_1009 PF00793 DAHP synthetase I family KUI_1010 PF00117 Glutamine amidotransferase class-I KUI_1010 PF06418 CTP synthase N-terminus KUI_1012 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUI_1012 PF03466 LysR substrate binding domain KUI_1013 PF01266 FAD dependent oxidoreductase KUI_1014 PF03553 KUI_1014 KUI_1015 PF00171 Aldehyde dehydrogenase family KUI_1016 PF02423 Ornithine cyclodeaminase/mu-crystallin family KUI_1017 PF00375 Sodium:dicarboxylate symporter family KUI_1018 PF00202 Aminotransferase class-III KUI_1019 PF07063 Domain of unknown function (DUF1338) KUI_1020 PF01471 Putative peptidoglycan binding domain KUI_1023 PF01471 Putative peptidoglycan binding domain KUI_1025 PF04325 Protein of unknown function (DUF465) KUI_1026 PF03544 Gram-negative bacterial TonB protein C-terminal KUI_1027 PF00593 TonB dependent receptor KUI_1028 PF04187 Protein of unknown function, DUF399 KUI_1032 PF00009 Elongation factor Tu GTP binding domain KUI_1032 PF00679 Elongation factor G C-terminus KUI_1032 PF03144 Elongation factor Tu domain 2 KUI_1033 PF01509 TruB family pseudouridylate synthase (N terminal domain) KUI_1033 PF16198 KUI_1033 KUI_1034 PF02033 Ribosome-binding factor A KUI_1035 PF00009 Elongation factor Tu GTP binding domain KUI_1035 PF04760 Translation initiation factor IF-2, N-terminal region KUI_1035 PF08364 KUI_1035 KUI_1035 PF11987 Translation-initiation factor 2 KUI_1036 PF00575 S1 RNA binding domain KUI_1036 PF08529 NusA N-terminal domain KUI_1036 PF13184 NusA-like KH domain KUI_1036 PF14520 Helix-hairpin-helix domain KUI_1037 PF02576 Uncharacterised BCR, YhbC family COG0779 KUI_1037 PF17384 KUI_1037 KUI_1038 PF00849 RNA pseudouridylate synthase KUI_1038 PF01479 S4 domain KUI_1039 PF04079 Putative transcriptional regulators (Ypuh-like) KUI_1041 PF00849 RNA pseudouridylate synthase KUI_1041 PF01479 S4 domain KUI_1042 PF13525 Outer membrane lipoprotein KUI_1043 PF00817 impB/mucB/samB family KUI_1043 PF11799 impB/mucB/samB family C-terminal domain KUI_1043 PF13438 KUI_1043 KUI_1044 PF00717 Peptidase S24-like KUI_1045 PF00580 UvrD/REP helicase N-terminal domain KUI_1045 PF13361 UvrD-like helicase C-terminal domain KUI_1046 PF01189 NOL1/NOP2/sun family KUI_1047 PF00551 Formyl transferase KUI_1048 PF01687 Riboflavin kinase KUI_1048 PF06574 FAD synthetase KUI_1049 PF00133 tRNA synthetases class I (I, L, M and V) KUI_1049 PF06827 Zinc finger found in FPG and IleRS KUI_1049 PF08264 Anticodon-binding domain of tRNA KUI_1050 PF01252 KUI_1050 KUI_1051 PF02441 Flavoprotein KUI_1051 PF04127 DNA / pantothenate metabolism flavoprotein KUI_1052 PF09335 KUI_1052 KUI_1053 PF00692 dUTPase KUI_1054 PF00593 TonB dependent receptor KUI_1054 PF07715 TonB-dependent Receptor Plug Domain KUI_1055 PF01298 Transferrin binding protein-like solute binding protein KUI_1055 PF17483 KUI_1055 KUI_1055 PF17484 KUI_1055 KUI_1056 PF13458 Periplasmic binding protein KUI_1057 PF00004 ATPase family associated with various cellular activities (AAA) KUI_1057 PF07724 AAA domain (Cdc48 subfamily) KUI_1057 PF10431 C-terminal, D2-small domain, of ClpB protein KUI_1058 PF00313 'Cold-shock' DNA-binding domain KUI_1059 PF02643 Uncharacterized ACR, COG1430 KUI_1060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUI_1060 PF03466 LysR substrate binding domain KUI_1061 PF00270 DEAD/DEAH box helicase KUI_1061 PF00271 Helicase conserved C-terminal domain KUI_1061 PF17191 KUI_1061 KUI_1062 PF01042 Endoribonuclease L-PSP KUI_1063 PF13343 Bacterial extracellular solute-binding protein KUI_1064 PF00528 Binding-protein-dependent transport system inner membrane component KUI_1065 PF00005 ABC transporter KUI_1067 PF00120 Glutamine synthetase, catalytic domain KUI_1067 PF03951 Glutamine synthetase, beta-Grasp domain KUI_1068 PF04055 Radical SAM superfamily KUI_1068 PF06969 HemN C-terminal domain KUI_1069 PF01725 Ham1 family KUI_1070 PF01138 3' exoribonuclease family, domain 1 KUI_1070 PF03725 3' exoribonuclease family, domain 2 KUI_1071 PF03755 KUI_1071 KUI_1071 PF08340 KUI_1071 KUI_1072 PF00772 DnaB-like helicase N terminal domain KUI_1072 PF03796 DnaB-like helicase C terminal domain KUI_1073 PF01281 Ribosomal protein L9, N-terminal domain KUI_1073 PF03948 Ribosomal protein L9, C-terminal domain KUI_1074 PF01084 Ribosomal protein S18 KUI_1076 PF01250 Ribosomal protein S6 KUI_1077 PF02649 Type I GTP cyclohydrolase folE2 KUI_1078 PF02779 Transketolase, pyrimidine binding domain KUI_1078 PF02780 Transketolase, C-terminal domain KUI_1078 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KUI_1079 PF00348 Polyprenyl synthetase KUI_1080 PF02609 Exonuclease VII small subunit KUI_1081 PF00355 Rieske [2Fe-2S] domain KUI_1081 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KUI_1082 PF01979 Amidohydrolase family KUI_1083 PF00221 Aromatic amino acid lyase KUI_1084 PF01175 Urocanase KUI_1084 PF17391 KUI_1084 KUI_1084 PF17392 KUI_1084 KUI_1085 PF00392 Bacterial regulatory proteins, gntR family KUI_1085 PF07702 UTRA domain KUI_1086 PF00581 Rhodanese-like domain KUI_1087 PF00892 EamA-like transporter family KUI_1088 PF01435 Peptidase family M48 KUI_1089 PF00476 DNA polymerase family A KUI_1089 PF01367 5'-3' exonuclease, C-terminal SAM fold KUI_1089 PF01612 3'-5' exonuclease KUI_1089 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KUI_1090 PF03641 Possible lysine decarboxylase KUI_1091 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KUI_1091 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KUI_1093 PF00391 PEP-utilising enzyme, mobile domain KUI_1093 PF02896 PEP-utilising enzyme, TIM barrel domain KUI_1093 PF05524 PEP-utilising enzyme, N-terminal KUI_1094 PF00381 PTS HPr component phosphorylation site KUI_1095 PF03610 PTS system fructose IIA component KUI_1096 PF00707 Translation initiation factor IF-3, C-terminal domain KUI_1096 PF05198 Translation initiation factor IF-3, N-terminal domain KUI_1097 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KUI_1097 PF02824 TGS domain KUI_1097 PF03129 Anticodon binding domain KUI_1097 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KUI_1099 PF00004 ATPase family associated with various cellular activities (AAA) KUI_1099 PF02190 ATP-dependent protease La (LON) domain KUI_1099 PF05362 Lon protease (S16) C-terminal proteolytic domain KUI_1100 PF06689 ClpX C4-type zinc finger KUI_1100 PF07724 AAA domain (Cdc48 subfamily) KUI_1100 PF10431 C-terminal, D2-small domain, of ClpB protein KUI_1101 PF00574 Clp protease KUI_1102 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KUI_1102 PF05697 Bacterial trigger factor protein (TF) KUI_1102 PF05698 Bacterial trigger factor protein (TF) C-terminus KUI_1105 PF03710 Glutamate-ammonia ligase adenylyltransferase KUI_1105 PF08335 GlnD PII-uridylyltransferase KUI_1106 PF02677 KUI_1106 KUI_1108 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KUI_1109 PF07424 KUI_1109 KUI_1111 PF01464 Transglycosylase SLT domain KUI_1113 PF05101 KUI_1113 KUI_1114 PF03135 KUI_1114 KUI_1117 PF01816 Leucine rich repeat variant KUI_1127 PF07996 Type IV secretion system proteins KUI_1128 PF04610 KUI_1128 KUI_1132 PF08401 KUI_1132 KUI_1133 PF10098 KUI_1133 KUI_1135 PF04335 VirB8 protein KUI_1136 PF03524 Conjugal transfer protein KUI_1137 PF03743 Bacterial conjugation TrbI-like protein KUI_1138 PF01816 Leucine rich repeat variant KUI_1143 PF00437 Type II/IV secretion system protein KUI_1144 PF02534 Type IV secretory system Conjugative DNA transfer KUI_1149 PF08707 KUI_1149 KUI_1149 PF13362 Toprim domain KUI_1151 PF05713 KUI_1151 KUI_1152 PF03432 KUI_1152 KUI_1157 PF08843 Nucleotidyl transferase of unknown function (DUF1814) KUI_1159 PF12844 Helix-turn-helix domain KUI_1160 PF13958 Toxin ToxN, type III toxin-antitoxin system KUI_1161 PF04796 KUI_1161 KUI_1162 PF01381 Helix-turn-helix KUI_1163 PF12728 Helix-turn-helix domain KUI_1164 PF00589 Phage integrase family KUI_1164 PF13356 Domain of unknown function (DUF4102) KUI_1164 PF14659 Phage integrase, N-terminal SAM-like domain KUI_1168 PF13328 HD domain KUI_1170 PF00701 Dihydrodipicolinate synthetase family KUI_1171 PF06804 NlpB/DapX lipoprotein KUI_1173 PF07520 KUI_1173 KUI_1174 PF10139 KUI_1174 KUI_1177 PF00005 ABC transporter KUI_1179 PF03781 Sulfatase-modifying factor enzyme 1 KUI_1182 PF13519 von Willebrand factor type A domain KUI_1183 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KUI_1183 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KUI_1184 PF00593 TonB dependent receptor KUI_1184 PF07715 TonB-dependent Receptor Plug Domain KUI_1185 PF00013 KH domain KUI_1185 PF00575 S1 RNA binding domain KUI_1185 PF01138 3' exoribonuclease family, domain 1 KUI_1185 PF03725 3' exoribonuclease family, domain 2 KUI_1185 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KUI_1186 PF00312 Ribosomal protein S15 KUI_1188 PF01235 KUI_1188 KUI_1189 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KUI_1189 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain KUI_1190 PF10369 Small subunit of acetolactate synthase KUI_1190 PF13710 ACT domain KUI_1191 PF00205 Thiamine pyrophosphate enzyme, central domain KUI_1191 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KUI_1191 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KUI_1192 PF03883 KUI_1192 KUI_1193 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KUI_1193 PF02403 Seryl-tRNA synthetase N-terminal domain KUI_1194 PF05496 Holliday junction DNA helicase ruvB N-terminus KUI_1194 PF12002 MgsA AAA+ ATPase C terminal KUI_1194 PF16193 KUI_1194 KUI_1195 PF03548 Outer membrane lipoprotein carrier protein LolA KUI_1196 PF01580 FtsK/SpoIIIE family KUI_1196 PF09397 Ftsk gamma domain KUI_1196 PF13491 KUI_1196 KUI_1197 PF07992 Pyridine nucleotide-disulphide oxidoreductase KUI_1198 PF01713 Smr domain KUI_1199 PF04284 KUI_1199 KUI_1200 PF08897 KUI_1200 KUI_1201 PF03601 KUI_1201 KUI_1203 PF03797 Autotransporter beta-domain KUI_1203 PF13018 KUI_1203 KUI_1204 PF00226 DnaJ domain KUI_1204 PF00684 DnaJ central domain KUI_1204 PF01556 DnaJ C terminal domain KUI_1205 PF00012 Hsp70 protein KUI_1206 PF01025 GrpE KUI_1207 PF00132 Bacterial transferase hexapeptide (six repeats) KUI_1208 PF00762 Ferrochelatase KUI_1209 PF01628 HrcA protein C terminal domain KUI_1209 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding KUI_1210 PF01513 ATP-NAD kinase KUI_1211 PF02463 RecF/RecN/SMC N terminal domain KUI_1212 PF01113 Dihydrodipicolinate reductase, N-terminus KUI_1212 PF05173 Dihydrodipicolinate reductase, C-terminus KUI_1213 PF04355 SmpA / OmlA family KUI_1214 PF01475 Ferric uptake regulator family KUI_1215 PF01565 FAD binding domain KUI_1215 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KUI_1217 PF01545 Cation efflux family KUI_1219 PF04261 Dyp-type peroxidase family KUI_1221 PF00005 ABC transporter KUI_1222 PF00528 Binding-protein-dependent transport system inner membrane component KUI_1223 PF00528 Binding-protein-dependent transport system inner membrane component KUI_1224 PF12849 PBP superfamily domain KUI_1225 PF02541 Ppx/GppA phosphatase family KUI_1226 PF13444 Acetyltransferase (GNAT) domain KUI_1227 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KUI_1227 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KUI_1227 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KUI_1227 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KUI_1228 PF00809 Pterin binding enzyme KUI_1229 PF00004 ATPase family associated with various cellular activities (AAA) KUI_1229 PF01434 Peptidase family M41 KUI_1230 PF01728 FtsJ-like methyltransferase KUI_1231 PF01985 CRS1 / YhbY (CRM) domain KUI_1232 PF01272 Transcription elongation factor, GreA/GreB, C-term KUI_1232 PF03449 Transcription elongation factor, N-terminal KUI_1233 PF00860 Permease family KUI_1234 PF00210 Ferritin-like domain KUI_1235 PF02142 MGS-like domain KUI_1235 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KUI_1235 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KUI_1236 PF00117 Glutamine amidotransferase class-I KUI_1236 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KUI_1237 PF02132 RecR protein KUI_1237 PF13662 Toprim domain KUI_1238 PF02575 YbaB/EbfC DNA-binding family KUI_1240 PF00580 UvrD/REP helicase N-terminal domain KUI_1240 PF13361 UvrD-like helicase C-terminal domain KUI_1241 PF12705 PD-(D/E)XK nuclease superfamily KUI_1243 PF04932 KUI_1243 KUI_1244 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KUI_1245 PF02661 Fic/DOC family KUI_1246 PF08843 Nucleotidyl transferase of unknown function (DUF1814) KUI_1250 PF00589 Phage integrase family KUI_1250 PF02899 Phage integrase, N-terminal SAM-like domain KUI_1251 PF02367 Uncharacterised P-loop hydrolase UPF0079 KUI_1252 PF01520 N-acetylmuramoyl-L-alanine amidase KUI_1252 PF11741 AMIN domain KUI_1253 PF01119 DNA mismatch repair protein, C-terminal domain KUI_1253 PF08676 MutL C terminal dimerisation domain KUI_1253 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUI_1254 PF01715 IPP transferase KUI_1255 PF00586 AIR synthase related protein, N-terminal domain KUI_1255 PF02769 AIR synthase related protein, C-terminal domain KUI_1256 PF00308 Bacterial dnaA protein KUI_1257 PF01743 Poly A polymerase head domain KUI_1257 PF12626 Polymerase A arginine-rich C-terminus KUI_1257 PF12627 Probable RNA and SrmB- binding site of polymerase A KUI_1258 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KUI_1259 PF00483 Nucleotidyl transferase KUI_1260 PF00342 Phosphoglucose isomerase KUI_1261 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KUI_1262 PF00034 Cytochrome c KUI_1267 PF00293 NUDIX domain KUI_1267 PF14803 Nudix N-terminal KUI_1268 PF01180 Dihydroorotate dehydrogenase KUI_1269 PF00085 Thioredoxin KUI_1270 PF00270 DEAD/DEAH box helicase KUI_1270 PF00271 Helicase conserved C-terminal domain KUI_1271 PF09678 KUI_1271 KUI_1272 PF01207 Dihydrouridine synthase (Dus) KUI_1273 PF02954 Bacterial regulatory protein, Fis family KUI_1274 PF01808 AICARFT/IMPCHase bienzyme KUI_1274 PF02142 MGS-like domain KUI_1275 PF02075 Crossover junction endodeoxyribonuclease RuvC KUI_1276 PF01330 RuvA N terminal domain KUI_1276 PF07499 RuvA, C-terminal domain KUI_1276 PF14520 Helix-hairpin-helix domain KUI_1277 PF04290 KUI_1277 KUI_1278 PF06808 KUI_1278 KUI_1279 PF05491 Holliday junction DNA helicase ruvB C-terminus KUI_1279 PF05496 Holliday junction DNA helicase ruvB N-terminus KUI_1280 PF01266 FAD dependent oxidoreductase KUI_1281 PF02597 ThiS family KUI_1282 PF05690 Thiazole biosynthesis protein ThiG KUI_1287 PF01522 Polysaccharide deacetylase KUI_1288 PF01055 Glycosyl hydrolases family 31 KUI_1289 PF01266 FAD dependent oxidoreductase KUI_1290 PF00571 CBS domain KUI_1290 PF01769 Divalent cation transporter KUI_1290 PF03448 MgtE intracellular N domain KUI_1291 PF01043 SecA preprotein cross-linking domain KUI_1291 PF02810 SEC-C motif KUI_1291 PF07516 SecA Wing and Scaffold domain KUI_1291 PF07517 SecA DEAD-like domain KUI_1292 PF01551 Peptidase family M23 KUI_1293 PF05258 KUI_1293 KUI_1294 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KUI_1295 PF00091 Tubulin/FtsZ family, GTPase domain KUI_1295 PF12327 FtsZ family, C-terminal domain KUI_1296 PF02491 SHS2 domain inserted in FTSA KUI_1296 PF14450 Cell division protein FtsA KUI_1297 PF03799 Cell division protein FtsQ KUI_1297 PF08478 POTRA domain, FtsQ-type KUI_1298 PF01820 D-ala D-ala ligase N-terminus KUI_1298 PF07478 D-ala D-ala ligase C-terminus KUI_1299 PF01225 Mur ligase family, catalytic domain KUI_1299 PF02875 Mur ligase family, glutamate ligase domain KUI_1299 PF08245 Mur ligase middle domain KUI_1300 PF03033 Glycosyltransferase family 28 N-terminal domain KUI_1300 PF04101 Glycosyltransferase family 28 C-terminal domain KUI_1301 PF01098 KUI_1301 KUI_1302 PF02875 Mur ligase family, glutamate ligase domain KUI_1302 PF08245 Mur ligase middle domain KUI_1303 PF00953 Glycosyl transferase family 4 KUI_1303 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 KUI_1304 PF01225 Mur ligase family, catalytic domain KUI_1304 PF02875 Mur ligase family, glutamate ligase domain KUI_1304 PF08245 Mur ligase middle domain KUI_1305 PF00905 Penicillin binding protein transpeptidase domain KUI_1305 PF03717 Penicillin-binding Protein dimerisation domain KUI_1306 PF04999 KUI_1306 KUI_1307 PF01795 MraW methylase family KUI_1308 PF02381 MraZ protein KUI_1309 PF00199 Catalase KUI_1309 PF06628 Catalase-related immune-responsive KUI_1310 PF02091 Glycyl-tRNA synthetase alpha subunit KUI_1311 PF02092 KUI_1311 KUI_1311 PF05746 DALR anticodon binding domain KUI_1312 PF08645 Polynucleotide kinase 3 phosphatase KUI_1313 PF01553 Acyltransferase KUI_1314 PF01863 Protein of unknown function DUF45 KUI_1315 PF00398 Ribosomal RNA adenine dimethylase KUI_1316 PF00639 PPIC-type PPIASE domain KUI_1316 PF09312 SurA N-terminal domain KUI_1316 PF13616 PPIC-type PPIASE domain KUI_1317 PF04453 Organic solvent tolerance protein KUI_1318 PF01636 Phosphotransferase enzyme family KUI_1319 PF00483 Nucleotidyl transferase KUI_1321 PF00072 Response regulator receiver domain KUI_1321 PF00486 Transcriptional regulatory protein, C terminal KUI_1322 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUI_1323 PF00749 tRNA synthetases class I (E and Q), catalytic domain KUI_1323 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KUI_1324 PF03775 Septum formation inhibitor MinC, C-terminal domain KUI_1324 PF05209 Septum formation inhibitor MinC, N-terminal domain KUI_1325 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KUI_1326 PF03776 Septum formation topological specificity factor MinE KUI_1327 PF00005 ABC transporter KUI_1327 PF12848 ABC transporter KUI_1330 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KUI_1331 PF00005 ABC transporter KUI_1332 PF00899 ThiF family KUI_1333 PF01243 Pyridoxamine 5'-phosphate oxidase KUI_1333 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KUI_1334 PF00034 Cytochrome c KUI_1334 PF03150 Di-haem cytochrome c peroxidase KUI_1335 PF01300 Telomere recombination KUI_1335 PF03481 Putative GTP-binding controlling metal-binding KUI_1336 PF02222 ATP-grasp domain KUI_1337 PF00731 AIR carboxylase KUI_1338 PF01259 SAICAR synthetase KUI_1339 PF01116 Fructose-bisphosphate aldolase class-II KUI_1340 PF00795 Carbon-nitrogen hydrolase KUI_1341 PF00162 Phosphoglycerate kinase KUI_1342 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KUI_1342 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KUI_1343 PF00456 Transketolase, thiamine diphosphate binding domain KUI_1343 PF02779 Transketolase, pyrimidine binding domain KUI_1343 PF02780 Transketolase, C-terminal domain KUI_1344 PF04452 RNA methyltransferase KUI_1345 PF01337 Barstar (barnase inhibitor) KUI_1347 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase KUI_1349 PF07332 KUI_1349 KUI_1350 PF05957 KUI_1350 KUI_1351 PF14681 Uracil phosphoribosyltransferase KUI_1352 PF02547 Queuosine biosynthesis protein KUI_1353 PF01702 Queuine tRNA-ribosyltransferase KUI_1354 PF02699 Preprotein translocase subunit KUI_1355 PF02355 Protein export membrane protein KUI_1355 PF07549 SecD/SecF GG Motif KUI_1355 PF13721 SecD export protein N-terminal TM region KUI_1356 PF02355 Protein export membrane protein KUI_1356 PF07549 SecD/SecF GG Motif KUI_1357 PF00919 Uncharacterized protein family UPF0004 KUI_1357 PF01938 TRAM domain KUI_1357 PF04055 Radical SAM superfamily KUI_1358 PF02562 PhoH-like protein KUI_1359 PF02130 Uncharacterized protein family UPF0054 KUI_1360 PF00571 CBS domain KUI_1360 PF03471 Transporter associated domain KUI_1361 PF00795 Carbon-nitrogen hydrolase KUI_1364 PF03895 YadA-like C-terminal region KUI_1365 PF00005 ABC transporter KUI_1365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KUI_1366 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KUI_1367 PF00528 Binding-protein-dependent transport system inner membrane component KUI_1368 PF00528 Binding-protein-dependent transport system inner membrane component KUI_1368 PF12911 KUI_1368 KUI_1369 PF03576 Peptidase family S58 KUI_1370 PF04951 D-aminopeptidase KUI_1371 PF01112 Asparaginase KUI_1372 PF00075 RNase H KUI_1374 PF00753 Metallo-beta-lactamase superfamily KUI_1374 PF16123 KUI_1374 KUI_1375 PF01464 Transglycosylase SLT domain KUI_1375 PF01476 LysM domain KUI_1376 PF00691 OmpA family KUI_1376 PF06078 Bacterial protein of unknown function (DUF937) KUI_1378 PF00677 Lumazine binding domain KUI_1379 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KUI_1379 PF01872 RibD C-terminal domain KUI_1380 PF03477 ATP cone domain KUI_1381 PF00464 Serine hydroxymethyltransferase KUI_1382 PF00579 tRNA synthetases class I (W and Y) KUI_1382 PF01479 S4 domain KUI_1383 PF03702 Uncharacterised protein family (UPF0075) KUI_1384 PF01521 Iron-sulphur cluster biosynthesis KUI_1386 PF00380 Ribosomal protein S9/S16 KUI_1387 PF00572 Ribosomal protein L13 KUI_1388 PF01523 Putative modulator of DNA gyrase KUI_1389 PF04751 Protein of unknown function (DUF615) KUI_1390 PF02230 Phospholipase/Carboxylesterase KUI_1391 PF00749 tRNA synthetases class I (E and Q), catalytic domain KUI_1393 PF02325 KUI_1393 KUI_1394 PF00294 pfkB family carbohydrate kinase KUI_1395 PF11906 KUI_1395 KUI_1395 PF13719 KUI_1395 KUI_1396 PF06325 Ribosomal protein L11 methyltransferase (PrmA) KUI_1397 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain KUI_1397 PF02785 Biotin carboxylase C-terminal domain KUI_1397 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KUI_1398 PF00364 Biotin-requiring enzyme KUI_1399 PF01225 Mur ligase family, catalytic domain KUI_1399 PF02875 Mur ligase family, glutamate ligase domain KUI_1399 PF08245 Mur ligase middle domain KUI_1400 PF00773 RNB domain KUI_1401 PF03739 KUI_1401 KUI_1402 PF00149 Calcineurin-like phosphoesterase KUI_1403 PF01553 Acyltransferase KUI_1404 PF01979 Amidohydrolase family KUI_1405 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KUI_1405 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KUI_1406 PF03652 Uncharacterised protein family (UPF0081) KUI_1407 PF02622 Uncharacterized ACR, COG1678 KUI_1408 PF00301 Rubredoxin KUI_1409 PF02581 Thiamine monophosphate synthase/TENI KUI_1410 PF00202 Aminotransferase class-III KUI_1411 PF00270 DEAD/DEAH box helicase KUI_1411 PF00271 Helicase conserved C-terminal domain KUI_1412 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase KUI_1413 PF01743 Poly A polymerase head domain KUI_1413 PF12627 Probable RNA and SrmB- binding site of polymerase A KUI_1414 PF01812 5-formyltetrahydrofolate cyclo-ligase family KUI_1417 PF03527 KUI_1417 KUI_1417 PF14414 KUI_1417 KUI_1419 PF03527 KUI_1419 KUI_1423 PF04328 KUI_1423 KUI_1424 PF02554 KUI_1424 KUI_1424 PF13722 KUI_1424 KUI_1426 PF00890 FAD binding domain KUI_1427 PF05145 KUI_1427 KUI_1428 PF01970 KUI_1428 KUI_1429 PF07331 KUI_1429 KUI_1430 PF03401 Tripartite tricarboxylate transporter family receptor KUI_1431 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KUI_1431 PF05221 S-adenosyl-L-homocysteine hydrolase KUI_1432 PF00438 S-adenosylmethionine synthetase, N-terminal domain KUI_1432 PF02772 S-adenosylmethionine synthetase, central domain KUI_1432 PF02773 S-adenosylmethionine synthetase, C-terminal domain KUI_1433 PF03279 KUI_1433 KUI_1434 PF00156 Phosphoribosyl transferase domain KUI_1435 PF03372 Endonuclease/Exonuclease/phosphatase family KUI_1437 PF07690 Major Facilitator Superfamily KUI_1438 PF00561 alpha/beta hydrolase fold KUI_1438 PF07021 Methionine biosynthesis protein MetW KUI_1439 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KUI_1441 PF00375 Sodium:dicarboxylate symporter family KUI_1442 PF01276 Orn/Lys/Arg decarboxylase, major domain KUI_1442 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain KUI_1442 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KUI_1443 PF02687 KUI_1443 KUI_1443 PF12704 MacB-like periplasmic core domain KUI_1444 PF00005 ABC transporter KUI_1446 PF00245 Alkaline phosphatase KUI_1447 PF00072 Response regulator receiver domain KUI_1447 PF00196 Bacterial regulatory proteins, luxR family KUI_1448 PF00512 His Kinase A (phospho-acceptor) domain KUI_1448 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUI_1448 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein KUI_1449 PF00034 Cytochrome c KUI_1449 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KUI_1451 PF00034 Cytochrome c KUI_1451 PF03150 Di-haem cytochrome c peroxidase KUI_1452 PF04116 KUI_1452 KUI_1453 PF09375 Imelysin KUI_1454 PF06537 KUI_1454 KUI_1455 PF09375 Imelysin KUI_1457 PF13449 Esterase-like activity of phytase KUI_1461 PF05656 KUI_1461 KUI_1462 PF04386 Stringent starvation protein B KUI_1463 PF00043 Glutathione S-transferase, C-terminal domain KUI_1463 PF13417 Glutathione S-transferase, N-terminal domain KUI_1464 PF02167 Cytochrome C1 family KUI_1465 PF00032 Cytochrome b(C-terminal)/b6/petD KUI_1465 PF00033 Cytochrome b(N-terminal)/b6/petB KUI_1466 PF00355 Rieske [2Fe-2S] domain KUI_1467 PF01741 Large-conductance mechanosensitive channel, MscL KUI_1468 PF01784 NIF3 (NGG1p interacting factor 3) KUI_1469 PF13180 PDZ domain KUI_1469 PF13365 Trypsin-like peptidase domain KUI_1470 PF00902 Sec-independent protein translocase protein (TatC) KUI_1471 PF02416 mttA/Hcf106 family KUI_1472 PF02416 mttA/Hcf106 family KUI_1473 PF00977 Histidine biosynthesis protein KUI_1474 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KUI_1475 PF01722 BolA-like protein KUI_1476 PF01061 KUI_1476 KUI_1477 PF00005 ABC transporter KUI_1478 PF05494 Toluene tolerance, Ttg2 KUI_1479 PF04333 KUI_1479 KUI_1480 PF02470 KUI_1480 KUI_1481 PF02405 KUI_1481 KUI_1482 PF00005 ABC transporter KUI_1483 PF02481 DNA recombination-mediator protein A KUI_1484 PF01327 Polypeptide deformylase KUI_1485 PF01168 Alanine racemase, N-terminal domain KUI_1486 PF00571 CBS domain KUI_1486 PF01595 KUI_1486 KUI_1486 PF03471 Transporter associated domain KUI_1487 PF01380 SIS domain KUI_1487 PF13522 Glutamine amidotransferase domain KUI_1488 PF00578 AhpC/TSA family KUI_1488 PF01625 Peptide methionine sulfoxide reductase KUI_1488 PF01641 SelR domain KUI_1490 PF00436 Single-strand binding protein family KUI_1491 PF00436 Single-strand binding protein family KUI_1492 PF07690 Major Facilitator Superfamily KUI_1493 PF00005 ABC transporter KUI_1494 PF00593 TonB dependent receptor KUI_1494 PF07715 TonB-dependent Receptor Plug Domain KUI_1495 PF01966 HD domain KUI_1495 PF13286 Phosphohydrolase-associated domain KUI_1496 PF00905 Penicillin binding protein transpeptidase domain KUI_1496 PF00912 Transglycosylase KUI_1496 PF17092 KUI_1496 KUI_1497 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KUI_1497 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KUI_1499 PF01578 KUI_1499 KUI_1500 PF05140 KUI_1500 KUI_1501 PF00034 Cytochrome c KUI_1502 PF01926 50S ribosome-binding GTPase KUI_1503 PF06092 KUI_1503 KUI_1504 PF00490 Delta-aminolevulinic acid dehydratase KUI_1505 PF02683 KUI_1505 KUI_1505 PF11412 Disulphide bond corrector protein DsbC KUI_1505 PF13098 Thioredoxin-like domain KUI_1506 PF10011 Predicted membrane protein (DUF2254) KUI_1507 PF03616 KUI_1507 KUI_1508 PF00491 Arginase family KUI_1511 PF01196 Ribosomal protein L17 KUI_1512 PF01000 RNA polymerase Rpb3/RpoA insert domain KUI_1512 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KUI_1512 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KUI_1513 PF00163 Ribosomal protein S4/S9 N-terminal domain KUI_1513 PF01479 S4 domain KUI_1514 PF00411 Ribosomal protein S11 KUI_1515 PF00416 Ribosomal protein S13/S18 KUI_1516 PF01176 Translation initiation factor 1A / IF-1 KUI_1517 PF00344 SecY translocase KUI_1518 PF00828 Ribosomal protein L18e/L15 KUI_1519 PF00327 Ribosomal protein L30p/L7e KUI_1520 PF00333 Ribosomal protein S5, N-terminal domain KUI_1520 PF03719 Ribosomal protein S5, C-terminal domain KUI_1521 PF00861 Ribosomal L18p/L5e family KUI_1522 PF00347 Ribosomal protein L6 KUI_1523 PF00410 Ribosomal protein S8 KUI_1524 PF00253 Ribosomal protein S14p/S29e KUI_1525 PF00281 Ribosomal protein L5 KUI_1525 PF00673 ribosomal L5P family C-terminus KUI_1526 PF00467 KOW motif KUI_1526 PF17136 KUI_1526 KUI_1527 PF00238 Ribosomal protein L14p/L23e KUI_1528 PF03553 KUI_1528 KUI_1528 PF13726 KUI_1528 KUI_1529 PF03553 KUI_1529 KUI_1529 PF13726 KUI_1529 KUI_1530 PF00394 Multicopper oxidase KUI_1530 PF07732 Multicopper oxidase KUI_1531 PF00578 AhpC/TSA family KUI_1531 PF02630 SCO1/SenC KUI_1533 PF00122 E1-E2 ATPase KUI_1533 PF00403 Heavy-metal-associated domain KUI_1533 PF00702 haloacid dehalogenase-like hydrolase KUI_1534 PF07331 KUI_1534 KUI_1535 PF01970 KUI_1535 KUI_1537 PF02798 Glutathione S-transferase, N-terminal domain KUI_1537 PF14497 Glutathione S-transferase, C-terminal domain KUI_1539 PF13635 KUI_1539 KUI_1540 PF01565 FAD binding domain KUI_1540 PF02913 FAD linked oxidases, C-terminal domain KUI_1541 PF03895 YadA-like C-terminal region KUI_1541 PF05662 Coiled stalk of trimeric autotransporter adhesin KUI_1541 PF13018 KUI_1541 KUI_1542 PF03895 YadA-like C-terminal region KUI_1542 PF05658 Head domain of trimeric autotransporter adhesin KUI_1542 PF05662 Coiled stalk of trimeric autotransporter adhesin KUI_1542 PF13018 KUI_1542 KUI_1543 PF03895 YadA-like C-terminal region KUI_1543 PF05658 Head domain of trimeric autotransporter adhesin KUI_1543 PF05662 Coiled stalk of trimeric autotransporter adhesin KUI_1543 PF13018 KUI_1543 KUI_1544 PF03895 YadA-like C-terminal region KUI_1544 PF05658 Head domain of trimeric autotransporter adhesin KUI_1544 PF05662 Coiled stalk of trimeric autotransporter adhesin KUI_1544 PF13018 KUI_1544 KUI_1545 PF00366 Ribosomal protein S17 KUI_1546 PF00831 Ribosomal L29 protein KUI_1547 PF00252 Ribosomal protein L16p/L10e KUI_1548 PF00189 Ribosomal protein S3, C-terminal domain KUI_1548 PF07650 KH domain KUI_1549 PF00237 Ribosomal protein L22p/L17e KUI_1550 PF00203 Ribosomal protein S19 KUI_1551 PF00181 Ribosomal Proteins L2, RNA binding domain KUI_1551 PF03947 Ribosomal Proteins L2, C-terminal domain KUI_1552 PF00276 Ribosomal protein L23 KUI_1553 PF00573 Ribosomal protein L4/L1 family KUI_1554 PF00297 Ribosomal protein L3 KUI_1555 PF02646 KUI_1555 KUI_1556 PF03180 NLPA lipoprotein KUI_1557 PF00528 Binding-protein-dependent transport system inner membrane component KUI_1558 PF00005 ABC transporter KUI_1558 PF09383 NIL domain KUI_1562 PF00338 Ribosomal protein S10p/S20e KUI_1563 PF00005 ABC transporter KUI_1563 PF00664 ABC transporter transmembrane region KUI_1564 PF04221 RelB antitoxin KUI_1565 PF00009 Elongation factor Tu GTP binding domain KUI_1565 PF03143 Elongation factor Tu C-terminal domain KUI_1565 PF03144 Elongation factor Tu domain 2 KUI_1566 PF00009 Elongation factor Tu GTP binding domain KUI_1566 PF00679 Elongation factor G C-terminus KUI_1566 PF03144 Elongation factor Tu domain 2 KUI_1566 PF03764 Elongation factor G, domain IV KUI_1566 PF14492 Elongation Factor G, domain II KUI_1567 PF00177 Ribosomal protein S7p/S5e KUI_1568 PF00164 Ribosomal protein S12/S23 KUI_1572 PF03328 HpcH/HpaI aldolase/citrate lyase family KUI_1573 PF02515 CoA-transferase family III KUI_1574 PF13452 N-terminal half of MaoC dehydratase KUI_1575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KUI_1575 PF02770 Acyl-CoA dehydrogenase, middle domain KUI_1575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KUI_1577 PF15515 MvaI/BcnI restriction endonuclease family KUI_1578 PF12844 Helix-turn-helix domain KUI_1579 PF01555 DNA methylase KUI_1580 PF06945 KUI_1580 KUI_1581 PF00696 Amino acid kinase family KUI_1582 PF00202 Aminotransferase class-III KUI_1583 PF01118 Semialdehyde dehydrogenase, NAD binding domain KUI_1584 PF00583 Acetyltransferase (GNAT) family KUI_1585 PF05232 KUI_1585 KUI_1586 PF00491 Arginase family KUI_1587 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KUI_1587 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KUI_1588 PF00623 RNA polymerase Rpb1, domain 2 KUI_1588 PF04983 RNA polymerase Rpb1, domain 3 KUI_1588 PF04997 RNA polymerase Rpb1, domain 1 KUI_1588 PF04998 RNA polymerase Rpb1, domain 5 KUI_1588 PF05000 RNA polymerase Rpb1, domain 4 KUI_1589 PF00562 RNA polymerase Rpb2, domain 6 KUI_1589 PF04560 RNA polymerase Rpb2, domain 7 KUI_1589 PF04561 RNA polymerase Rpb2, domain 2 KUI_1589 PF04563 RNA polymerase beta subunit KUI_1589 PF04565 RNA polymerase Rpb2, domain 3 KUI_1589 PF10385 RNA polymerase beta subunit external 1 domain KUI_1590 PF00542 Ribosomal protein L7/L12 C-terminal domain KUI_1590 PF16320 KUI_1590 KUI_1591 PF00466 Ribosomal protein L10 KUI_1592 PF00687 Ribosomal protein L1p/L10e family KUI_1593 PF00298 Ribosomal protein L11, RNA binding domain KUI_1593 PF03946 Ribosomal protein L11, N-terminal domain KUI_1594 PF00467 KOW motif KUI_1594 PF02357 Transcription termination factor nusG KUI_1595 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KUI_1597 PF00009 Elongation factor Tu GTP binding domain KUI_1597 PF03143 Elongation factor Tu C-terminal domain KUI_1597 PF03144 Elongation factor Tu domain 2 KUI_1598 PF08238 Sel1 repeat KUI_1602 PF02195 ParB-like nuclease domain KUI_1603 PF13614 AAA domain KUI_1604 PF02527 rRNA small subunit methyltransferase G KUI_1605 PF01134 Glucose inhibited division protein A KUI_1605 PF13932 GidA associated domain 3 KUI_1606 PF01230 HIT domain KUI_1607 PF02096 60Kd inner membrane protein KUI_1607 PF14849 YidC periplasmic domain KUI_1608 PF01809 KUI_1608 KUI_1609 PF00825 Ribonuclease P KUI_1610 PF00468 Ribosomal protein L34