KUI_0001 SM00382 ATPases associated with a variety of cellular activities KUI_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain KUI_0002 SM00480 DNA polymerase III beta subunit KUI_0003 SM00387 Histidine kinase-like ATPases KUI_0003 SM00433 TopoisomeraseII KUI_0005 SM00382 ATPases associated with a variety of cellular activities KUI_0008 SM00382 ATPases associated with a variety of cellular activities KUI_0014 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain KUI_0014 SM00437 Bacterial DNA topoisomerase I DNA-binding domain KUI_0014 SM00493 KUI_0014 KUI_0015 SM00729 Elongator protein 3, MiaB family, Radical SAM KUI_0022 SM00836 DALR anticodon binding domain KUI_0022 SM01016 Arginyl tRNA synthetase N terminal dom KUI_0024 SM00917 LeuA allosteric (dimerisation) domain KUI_0039 SM00062 Bacterial periplasmic substrate-binding proteins KUI_0042 SM00382 ATPases associated with a variety of cellular activities KUI_0057 SM00936 Penicillin-binding protein 5, C-terminal domain KUI_0063 SM00729 Elongator protein 3, MiaB family, Radical SAM KUI_0070 SM00487 DEAD-like helicases superfamily KUI_0070 SM00490 helicase superfamily c-terminal domain KUI_0074 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KUI_0074 SM00387 Histidine kinase-like ATPases KUI_0074 SM00388 His Kinase A (phosphoacceptor) domain KUI_0075 SM00448 cheY-homologous receiver domain KUI_0082 SM00382 ATPases associated with a variety of cellular activities KUI_0082 SM01086 C-terminal, D2-small domain, of ClpB protein KUI_0148 SM00450 Rhodanese Homology Domain KUI_0149 SM00855 Phosphoglycerate mutase family KUI_0151 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KUI_0151 SM00245 tail specific protease KUI_0162 SM00382 ATPases associated with a variety of cellular activities KUI_0168 SM00382 ATPases associated with a variety of cellular activities KUI_0174 SM00833 Cobalamin synthesis protein cobW C-terminal domain KUI_0177 SM00382 ATPases associated with a variety of cellular activities KUI_0179 SM00869 Autotransporter beta-domain KUI_0183 SM00845 GatB domain KUI_0192 SM00382 ATPases associated with a variety of cellular activities KUI_0195 SM00382 ATPases associated with a variety of cellular activities KUI_0213 SM00382 ATPases associated with a variety of cellular activities KUI_0213 SM01086 C-terminal, D2-small domain, of ClpB protein KUI_0219 SM00487 DEAD-like helicases superfamily KUI_0219 SM00490 helicase superfamily c-terminal domain KUI_0223 SM00487 DEAD-like helicases superfamily KUI_0234 SM00382 ATPases associated with a variety of cellular activities KUI_0235 SM00382 ATPases associated with a variety of cellular activities KUI_0243 SM00925 MltA specific insert domain KUI_0246 SM00749 bacterial OsmY and nodulation domain KUI_0254 SM00382 ATPases associated with a variety of cellular activities KUI_0258 SM00116 Domain in cystathionine beta-synthase and other proteins. KUI_0261 SM00387 Histidine kinase-like ATPases KUI_0261 SM00388 His Kinase A (phosphoacceptor) domain KUI_0262 SM00448 cheY-homologous receiver domain KUI_0262 SM00862 Transcriptional regulatory protein, C terminal KUI_0271 SM00870 KUI_0271 KUI_0280 SM00937 KUI_0280 KUI_0298 SM00829 Enoylreductase KUI_0307 SM00905 Dihydroneopterin aldolase KUI_0309 SM00155 Phospholipase D. Active site motifs. KUI_0312 SM00062 Bacterial periplasmic substrate-binding proteins KUI_0314 SM00729 Elongator protein 3, MiaB family, Radical SAM KUI_0314 SM00876 Biotin and Thiamin Synthesis associated domain KUI_0316 SM00479 KUI_0316 KUI_0317 SM00479 KUI_0317 KUI_0325 SM00644 KUI_0325 KUI_0328 SM00382 ATPases associated with a variety of cellular activities KUI_0328 SM00962 SRP54-type protein, GTPase domain KUI_0328 SM00963 SRP54-type protein, helical bundle domain KUI_0329 SM00257 Lysin motif KUI_0344 SM00984 UDP binding domain KUI_0351 SM01400 KUI_0351 KUI_0364 SM00382 ATPases associated with a variety of cellular activities KUI_0364 SM00962 SRP54-type protein, GTPase domain KUI_0364 SM00963 SRP54-type protein, helical bundle domain KUI_0365 SM00880 KUI_0365 KUI_0365 SM01118 KUI_0365 KUI_0366 SM00347 helix_turn_helix multiple antibiotic resistance protein KUI_0373 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family KUI_0376 SM00883 Chaperonin 10 Kd subunit KUI_0377 SM00062 Bacterial periplasmic substrate-binding proteins KUI_0412 SM00382 ATPases associated with a variety of cellular activities KUI_0414 SM00460 Transglutaminase/protease-like homologues KUI_0415 SM00460 Transglutaminase/protease-like homologues KUI_0426 SM00151 SWI complex, BAF60b domains KUI_0434 SM00382 ATPases associated with a variety of cellular activities KUI_0435 SM00382 ATPases associated with a variety of cellular activities KUI_0436 SM00829 Enoylreductase KUI_0450 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KUI_0451 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KUI_0461 SM00487 DEAD-like helicases superfamily KUI_0461 SM00490 helicase superfamily c-terminal domain KUI_0461 SM00982 KUI_0461 KUI_0461 SM01058 CarD-like/TRCF domain KUI_0465 SM00387 Histidine kinase-like ATPases KUI_0465 SM00388 His Kinase A (phosphoacceptor) domain KUI_0466 SM00448 cheY-homologous receiver domain KUI_0466 SM00862 Transcriptional regulatory protein, C terminal KUI_0472 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KUI_0472 SM00292 breast cancer carboxy-terminal domain KUI_0472 SM00532 Ligase N family KUI_0480 SM00382 ATPases associated with a variety of cellular activities KUI_0481 SM00382 ATPases associated with a variety of cellular activities KUI_0482 SM00478 endonuclease III KUI_0482 SM00525 KUI_0482 KUI_0487 SM00954 Region found in RelA / SpoT proteins KUI_0489 SM00316 Ribosomal protein S1-like RNA-binding domain KUI_0490 SM00363 S4 RNA-binding domain KUI_0498 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KUI_0499 SM00822 KUI_0499 KUI_0501 SM00825 Beta-ketoacyl synthase KUI_0503 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KUI_0504 SM00838 Elongation factor G C-terminus KUI_0506 SM00358 Double-stranded RNA binding motif KUI_0506 SM00535 Ribonuclease III family KUI_0533 SM01209 KUI_0533 KUI_0533 SM01210 KUI_0533 KUI_0550 SM00382 ATPases associated with a variety of cellular activities KUI_0552 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KUI_0552 SM00245 tail specific protease KUI_0557 SM00434 DNA Topoisomerase IV KUI_0559 SM00830 Chorismate mutase type II KUI_0562 SM00316 Ribosomal protein S1-like RNA-binding domain KUI_0563 SM00411 bacterial (prokaryotic) histone like domain KUI_0567 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KUI_0576 SM00100 Cyclic nucleotide-monophosphate binding domain KUI_0576 SM00419 helix_turn_helix, cAMP Regulatory protein KUI_0582 SM00981 KUI_0582 KUI_0588 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. KUI_0589 SM00533 DNA-binding domain of DNA mismatch repair MUTS family KUI_0589 SM00534 ATPase domain of DNA mismatch repair MUTS family KUI_0596 SM00028 Tetratricopeptide repeats KUI_0597 SM00840 KUI_0597 KUI_0606 SM00382 ATPases associated with a variety of cellular activities KUI_0611 SM00841 Elongation factor P, C-terminal KUI_0611 SM01185 KUI_0611 KUI_0619 SM00014 Acid phosphatase homologues KUI_0623 SM00357 Cold shock protein domain KUI_0623 SM00382 ATPases associated with a variety of cellular activities KUI_0623 SM00959 Rho termination factor, N-terminal domain KUI_0625 SM00387 Histidine kinase-like ATPases KUI_0625 SM00433 TopoisomeraseII KUI_0626 SM00434 DNA Topoisomerase IV KUI_0629 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain KUI_0634 SM00226 Low molecular weight phosphatase family KUI_0639 SM00271 DnaJ molecular chaperone homology domain KUI_0642 SM00671 Sel1-like repeats. KUI_0643 SM00671 Sel1-like repeats. KUI_0644 SM00671 Sel1-like repeats. KUI_0645 SM00671 Sel1-like repeats. KUI_0647 SM00937 KUI_0647 KUI_0651 SM00382 ATPases associated with a variety of cellular activities KUI_0654 SM00849 Metallo-beta-lactamase superfamily KUI_0655 SM00481 DNA polymerase alpha chain like domain KUI_0662 SM00873 B3/4 domain KUI_0662 SM00874 tRNA synthetase B5 domain KUI_0662 SM00896 Ferredoxin-fold anticodon binding domain KUI_0663 SM00411 bacterial (prokaryotic) histone like domain KUI_0664 SM00422 helix_turn_helix, mercury resistance KUI_0674 SM01211 KUI_0674 KUI_0675 SM00116 Domain in cystathionine beta-synthase and other proteins. KUI_0675 SM01240 KUI_0675 KUI_0681 SM00671 Sel1-like repeats. KUI_0691 SM00382 ATPases associated with a variety of cellular activities KUI_0697 SM00382 ATPases associated with a variety of cellular activities KUI_0698 SM00382 ATPases associated with a variety of cellular activities KUI_0702 SM00919 Malic enzyme, NAD binding domain KUI_0702 SM01274 KUI_0702 KUI_0703 SM00861 Transketolase, pyrimidine binding domain KUI_0710 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KUI_0710 SM00954 Region found in RelA / SpoT proteins KUI_0711 SM01409 KUI_0711 KUI_0712 SM00072 Guanylate kinase homologues. KUI_0713 SM00670 Large family of predicted nucleotide-binding domains KUI_0719 SM01005 Alanine racemase, C-terminal domain KUI_0720 SM00382 ATPases associated with a variety of cellular activities KUI_0722 SM00382 ATPases associated with a variety of cellular activities KUI_0728 SM00382 ATPases associated with a variety of cellular activities KUI_0728 SM00487 DEAD-like helicases superfamily KUI_0728 SM00490 helicase superfamily c-terminal domain KUI_0728 SM00847 Helicase associated domain (HA2) Add an annotation KUI_0729 SM00481 DNA polymerase alpha chain like domain KUI_0731 SM00382 ATPases associated with a variety of cellular activities KUI_0732 SM00316 Ribosomal protein S1-like RNA-binding domain KUI_0739 SM00318 Staphylococcal nuclease homologues KUI_0746 SM00382 ATPases associated with a variety of cellular activities KUI_0750 SM00316 Ribosomal protein S1-like RNA-binding domain KUI_0750 SM00357 Cold shock protein domain KUI_0750 SM00955 KUI_0750 KUI_0751 SM00967 RNA 2'-O ribose methyltransferase substrate binding KUI_0753 SM00411 bacterial (prokaryotic) histone like domain KUI_0755 SM00382 ATPases associated with a variety of cellular activities KUI_0774 SM00382 ATPases associated with a variety of cellular activities KUI_0775 SM00382 ATPases associated with a variety of cellular activities KUI_0779 SM00421 helix_turn_helix, Lux Regulon KUI_0779 SM00448 cheY-homologous receiver domain KUI_0780 SM00091 PAS domain KUI_0780 SM00387 Histidine kinase-like ATPases KUI_0780 SM00388 His Kinase A (phosphoacceptor) domain KUI_0792 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KUI_0801 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KUI_0803 SM00935 Outer membrane protein (OmpH-like) KUI_0814 SM00244 prohibitin homologues KUI_0823 SM00248 ankyrin repeats KUI_0847 SM00363 S4 RNA-binding domain KUI_0848 SM00938 Nitrogen regulatory protein P-II KUI_0853 SM00382 ATPases associated with a variety of cellular activities KUI_0856 SM00487 DEAD-like helicases superfamily KUI_0856 SM00490 helicase superfamily c-terminal domain KUI_0870 SM00382 ATPases associated with a variety of cellular activities KUI_0871 SM00382 ATPases associated with a variety of cellular activities KUI_0875 SM00859 Semialdehyde dehydrogenase, NAD binding domain KUI_0876 SM01329 KUI_0876 KUI_0884 SM00116 Domain in cystathionine beta-synthase and other proteins. KUI_0887 SM00893 Electron transfer flavoprotein domain KUI_0888 SM00893 Electron transfer flavoprotein domain KUI_0890 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KUI_0890 SM00465 GIY-YIG type nucleases (URI domain) KUI_0893 SM00479 KUI_0893 KUI_0900 SM00240 Forkhead associated domain KUI_0902 SM00858 KUI_0902 KUI_0907 SM00986 Uracil DNA glycosylase superfamily KUI_0907 SM00987 UreE urease accessory protein, C-terminal domain KUI_0909 SM00671 Sel1-like repeats. KUI_0911 SM00400 zinc finger KUI_0911 SM00493 KUI_0911 KUI_0914 SM00788 Adenylosuccinate synthetase KUI_0915 SM00244 prohibitin homologues KUI_0916 SM00244 prohibitin homologues KUI_0920 SM00564 beta-propeller repeat KUI_0926 SM00562 KUI_0926 KUI_0935 SM00881 CoA binding domain KUI_0942 SM00257 Lysin motif KUI_0945 SM01207 KUI_0945 KUI_0949 SM00382 ATPases associated with a variety of cellular activities KUI_0956 SM00347 helix_turn_helix multiple antibiotic resistance protein KUI_0958 SM01005 Alanine racemase, C-terminal domain KUI_0959 SM00671 Sel1-like repeats. KUI_0961 SM00671 Sel1-like repeats. KUI_0963 SM00833 Cobalamin synthesis protein cobW C-terminal domain KUI_0966 SM00382 ATPases associated with a variety of cellular activities KUI_0989 SM00248 ankyrin repeats KUI_1005 SM00382 ATPases associated with a variety of cellular activities KUI_1005 SM01086 C-terminal, D2-small domain, of ClpB protein KUI_1008 SM01192 KUI_1008 KUI_1008 SM01193 KUI_1008 KUI_1019 SM01150 KUI_1019 KUI_1032 SM00838 Elongation factor G C-terminus KUI_1036 SM00316 Ribosomal protein S1-like RNA-binding domain KUI_1038 SM00363 S4 RNA-binding domain KUI_1041 SM00363 S4 RNA-binding domain KUI_1048 SM00904 Riboflavin kinase KUI_1057 SM00382 ATPases associated with a variety of cellular activities KUI_1057 SM01086 C-terminal, D2-small domain, of ClpB protein KUI_1058 SM00357 Cold shock protein domain KUI_1061 SM00487 DEAD-like helicases superfamily KUI_1061 SM00490 helicase superfamily c-terminal domain KUI_1065 SM00382 ATPases associated with a variety of cellular activities KUI_1067 SM01230 KUI_1067 KUI_1068 SM00729 Elongator protein 3, MiaB family, Radical SAM KUI_1072 SM00382 ATPases associated with a variety of cellular activities KUI_1078 SM00861 Transketolase, pyrimidine binding domain KUI_1085 SM00345 helix_turn_helix gluconate operon transcriptional repressor KUI_1085 SM00866 KUI_1085 KUI_1086 SM00450 Rhodanese Homology Domain KUI_1089 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs KUI_1089 SM00474 3'-5' exonuclease KUI_1089 SM00475 5'-3' exonuclease KUI_1089 SM00482 DNA polymerase A domain KUI_1091 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain KUI_1097 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain KUI_1099 SM00382 ATPases associated with a variety of cellular activities KUI_1099 SM00464 Found in ATP-dependent protease La (LON) KUI_1100 SM00382 ATPases associated with a variety of cellular activities KUI_1100 SM00994 ClpX C4-type zinc finger KUI_1100 SM01086 C-terminal, D2-small domain, of ClpB protein KUI_1159 SM00530 Helix-turn-helix XRE-family like proteins KUI_1162 SM00530 Helix-turn-helix XRE-family like proteins KUI_1170 SM01130 KUI_1170 KUI_1177 SM00382 ATPases associated with a variety of cellular activities KUI_1182 SM00327 von Willebrand factor (vWF) type A domain KUI_1183 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KUI_1185 SM00316 Ribosomal protein S1-like RNA-binding domain KUI_1185 SM00322 K homology RNA-binding domain KUI_1186 SM01387 KUI_1186 KUI_1194 SM00382 ATPases associated with a variety of cellular activities KUI_1196 SM00843 KUI_1196 KUI_1198 SM00463 Small MutS-related domain KUI_1203 SM00869 Autotransporter beta-domain KUI_1204 SM00271 DnaJ molecular chaperone homology domain KUI_1221 SM00382 ATPases associated with a variety of cellular activities KUI_1229 SM00382 ATPases associated with a variety of cellular activities KUI_1231 SM01103 KUI_1231 KUI_1235 SM00851 MGS-like domain KUI_1235 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KUI_1236 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain KUI_1237 SM00493 KUI_1237 KUI_1252 SM00646 KUI_1252 KUI_1253 SM00853 MutL C terminal dimerisation domain KUI_1253 SM01340 KUI_1253 KUI_1270 SM00487 DEAD-like helicases superfamily KUI_1270 SM00490 helicase superfamily c-terminal domain KUI_1274 SM00798 AICARFT/IMPCHase bienzyme KUI_1274 SM00851 MGS-like domain KUI_1276 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KUI_1279 SM00382 ATPases associated with a variety of cellular activities KUI_1290 SM00116 Domain in cystathionine beta-synthase and other proteins. KUI_1290 SM00924 MgtE intracellular N domain KUI_1291 SM00957 SecA DEAD-like domain KUI_1291 SM00958 SecA preprotein cross-linking domain KUI_1295 SM00864 Tubulin/FtsZ family, GTPase domain KUI_1295 SM00865 Tubulin/FtsZ family, C-terminal domain KUI_1296 SM00842 Cell division protein FtsA KUI_1298 SM01209 KUI_1298 KUI_1309 SM01060 KUI_1309 KUI_1313 SM00563 Phosphate acyltransferases KUI_1315 SM00650 Ribosomal RNA adenine dimethylases KUI_1321 SM00448 cheY-homologous receiver domain KUI_1321 SM00862 Transcriptional regulatory protein, C terminal KUI_1322 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KUI_1322 SM00387 Histidine kinase-like ATPases KUI_1322 SM00388 His Kinase A (phosphoacceptor) domain KUI_1327 SM00382 ATPases associated with a variety of cellular activities KUI_1337 SM01001 AIR carboxylase KUI_1342 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KUI_1343 SM00861 Transketolase, pyrimidine binding domain KUI_1354 SM01323 KUI_1354 KUI_1357 SM00729 Elongator protein 3, MiaB family, Radical SAM KUI_1360 SM00116 Domain in cystathionine beta-synthase and other proteins. KUI_1360 SM01091 Transporter associated domain KUI_1365 SM00382 ATPases associated with a variety of cellular activities KUI_1374 SM00849 Metallo-beta-lactamase superfamily KUI_1375 SM00257 Lysin motif KUI_1397 SM00878 Biotin carboxylase C-terminal domain KUI_1400 SM00955 KUI_1400 KUI_1403 SM00563 Phosphate acyltransferases KUI_1406 SM00732 Likely ribonuclease with RNase H fold. KUI_1411 SM00487 DEAD-like helicases superfamily KUI_1411 SM00490 helicase superfamily c-terminal domain KUI_1431 SM00996 S-adenosyl-L-homocysteine hydrolase KUI_1431 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KUI_1444 SM00382 ATPases associated with a variety of cellular activities KUI_1446 SM00098 Alkaline phosphatase homologues KUI_1447 SM00421 helix_turn_helix, Lux Regulon KUI_1447 SM00448 cheY-homologous receiver domain KUI_1448 SM00387 Histidine kinase-like ATPases KUI_1448 SM00388 His Kinase A (phosphoacceptor) domain KUI_1469 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KUI_1477 SM00382 ATPases associated with a variety of cellular activities KUI_1482 SM00382 ATPases associated with a variety of cellular activities KUI_1486 SM00116 Domain in cystathionine beta-synthase and other proteins. KUI_1486 SM01091 Transporter associated domain KUI_1493 SM00382 ATPases associated with a variety of cellular activities KUI_1495 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KUI_1504 SM01004 Delta-aminolevulinic acid dehydratase KUI_1512 SM00662 RNA polymerases D KUI_1513 SM00363 S4 RNA-binding domain KUI_1513 SM01390 KUI_1513 KUI_1516 SM00316 Ribosomal protein S1-like RNA-binding domain KUI_1526 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. KUI_1527 SM01374 KUI_1527 KUI_1548 SM00322 K homology RNA-binding domain KUI_1551 SM01382 KUI_1551 KUI_1551 SM01383 KUI_1551 KUI_1558 SM00382 ATPases associated with a variety of cellular activities KUI_1558 SM00930 KUI_1558 KUI_1562 SM01403 KUI_1562 KUI_1563 SM00382 ATPases associated with a variety of cellular activities KUI_1566 SM00838 Elongation factor G C-terminus KUI_1566 SM00889 Elongation factor G, domain IV KUI_1578 SM00530 Helix-turn-helix XRE-family like proteins KUI_1583 SM00859 Semialdehyde dehydrogenase, NAD binding domain KUI_1588 SM00663 RNA polymerase I subunit A N-terminus KUI_1593 SM00649 Ribosomal protein L11/L12 KUI_1594 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. KUI_1594 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. KUI_1598 SM00671 Sel1-like repeats. KUI_1602 SM00470 ParB-like nuclease domain KUI_1605 SM01228 KUI_1605 KUI_1608 SM01234 KUI_1608