locus-tag class description PJW08_00210 IPR001826 RHS protein PJW08_00210 IPR022385 Rhs repeat-associated core PJW08_00210 IPR031325 RHS repeat PJW08_00210 IPR006530 YD repeat PJW08_00225 IPR006530 YD repeat PJW08_00225 IPR031325 RHS repeat PJW08_00225 IPR022385 Rhs repeat-associated core PJW08_00225 IPR003615 HNH nuclease PJW08_00225 IPR008727 PAAR motif PJW08_00235 IPR022385 Rhs repeat-associated core PJW08_00235 IPR006530 YD repeat PJW08_00235 IPR031325 RHS repeat PJW08_00235 IPR008727 PAAR motif PJW08_00245 IPR006530 YD repeat PJW08_00245 IPR031325 RHS repeat PJW08_00245 IPR022385 Rhs repeat-associated core PJW08_00245 IPR008727 PAAR motif PJW08_00255 IPR006530 YD repeat PJW08_00255 IPR031325 RHS repeat PJW08_00255 IPR022385 Rhs repeat-associated core PJW08_00255 IPR001826 RHS protein PJW08_00265 IPR001826 RHS protein PJW08_00265 IPR022385 Rhs repeat-associated core PJW08_00265 IPR006530 YD repeat PJW08_00265 IPR031325 RHS repeat PJW08_00275 IPR006530 YD repeat PJW08_00275 IPR031325 RHS repeat PJW08_00275 IPR022385 Rhs repeat-associated core PJW08_00275 IPR001826 RHS protein PJW08_00525 IPR011010 DNA breaking-rejoining enzyme, catalytic core PJW08_00525 IPR013762 Integrase-like, catalytic domain superfamily PJW08_00525 IPR002104 Integrase, catalytic domain PJW08_00525 IPR010998 Integrase/recombinase, N-terminal PJW08_00525 IPR004107 Integrase, SAM-like, N-terminal PJW08_00570 IPR004107 Integrase, SAM-like, N-terminal PJW08_00570 IPR010998 Integrase/recombinase, N-terminal PJW08_00570 IPR011010 DNA breaking-rejoining enzyme, catalytic core PJW08_00570 IPR013762 Integrase-like, catalytic domain superfamily PJW08_00570 IPR002104 Integrase, catalytic domain PJW08_00645 IPR002559 Transposase, IS4-like PJW08_00645 IPR032806 H repeat-associated protein, N-terminal PJW08_00730 IPR025669 AAA domain PJW08_00730 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_00815 IPR003369 Sec-independent protein translocase protein TatA/B/E PJW08_00815 IPR006312 Sec-independent protein translocase protein TatA/E PJW08_00825 IPR036013 Band 7/SPFH domain superfamily PJW08_00825 IPR010201 HflK PJW08_00825 IPR001107 Band 7 domain PJW08_00845 IPR023091 Metalloprotease catalytic domain superfamily, predicted PJW08_00845 IPR002036 Endoribonuclease YbeY PJW08_00855 IPR000924 Glutamyl/glutaminyl-tRNA synthetase PJW08_00855 IPR033910 Glutamyl-tRNA synthetase PJW08_00855 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain PJW08_00855 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW08_00855 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial PJW08_00855 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 PJW08_00855 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding PJW08_00855 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PJW08_00880 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type PJW08_00880 IPR029052 Metallo-dependent phosphatase-like PJW08_00880 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain PJW08_00880 IPR004593 Nuclease SbcCD subunit D PJW08_00880 IPR026843 Nuclease SbcCD subunit D, C-terminal domain PJW08_00885 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_00885 IPR038729 Rad50/SbcC-type AAA domain PJW08_00885 IPR004592 Nuclease SbcC, gammaproteobacteria type PJW08_00920 IPR037235 TRCF-like, C-terminal domain PJW08_00920 IPR041471 UvrB, interaction domain PJW08_00920 IPR005118 Transcription-repair-coupling factor, C-terminal domain PJW08_00920 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_00920 IPR004576 Transcription-repair coupling factor PJW08_00920 IPR014001 Helicase superfamily 1/2, ATP-binding domain PJW08_00920 IPR011545 DEAD/DEAH box helicase domain PJW08_00920 IPR003711 CarD-like/TRCF domain PJW08_00920 IPR036101 CarD-like/TRCF domain superfamily PJW08_00920 IPR001650 Helicase, C-terminal PJW08_00925 IPR004779 Carboxylate/Amino Acid/Amine Transporter PJW08_00925 IPR000620 EamA domain PJW08_00940 IPR003488 DNA recombination-mediator protein A PJW08_00940 IPR041614 DprA, winged helix domain PJW08_00940 IPR010994 RuvA domain 2-like PJW08_00940 IPR036388 Winged helix-like DNA-binding domain superfamily PJW08_00970 IPR025877 MobA-like NTP transferase PJW08_00970 IPR013482 Molybdenum cofactor guanylyltransferase PJW08_00970 IPR029044 Nucleotide-diphospho-sugar transferases PJW08_00975 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain PJW08_00975 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily PJW08_00975 IPR023045 Molybdenum cofactor biosynthesis C PJW08_00980 IPR036425 MoaB/Mog-like domain superfamily PJW08_00980 IPR001453 MoaB/Mog domain PJW08_00980 IPR008284 Molybdenum cofactor biosynthesis, conserved site PJW08_00980 IPR038987 Molybdopterin biosynthesis protein MoeA-like PJW08_00980 IPR005111 MoeA, C-terminal, domain IV PJW08_00980 IPR036688 MoeA, C-terminal, domain IV superfamily PJW08_00980 IPR005110 MoeA, N-terminal and linker domain PJW08_00980 IPR036135 MoeA, N-terminal and linker domain superfamily PJW08_00985 IPR013785 Aldolase-type TIM barrel PJW08_00985 IPR006638 Elp3/MiaB/NifB PJW08_00985 IPR013483 Molybdenum cofactor biosynthesis protein A PJW08_00985 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site PJW08_00985 IPR010505 Molybdenum cofactor synthesis C-terminal PJW08_00985 IPR007197 Radical SAM PJW08_00990 IPR007197 Radical SAM PJW08_00990 IPR010505 Molybdenum cofactor synthesis C-terminal PJW08_00990 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site PJW08_00990 IPR013483 Molybdenum cofactor biosynthesis protein A PJW08_00990 IPR006638 Elp3/MiaB/NifB PJW08_00990 IPR013785 Aldolase-type TIM barrel PJW08_01000 IPR014914 RES domain PJW08_01015 IPR000305 GIY-YIG endonuclease PJW08_01015 IPR035901 GIY-YIG endonuclease superfamily PJW08_01015 IPR010994 RuvA domain 2-like PJW08_01015 IPR001943 UVR domain PJW08_01015 IPR036876 UVR domain superfamily PJW08_01015 IPR004791 UvrABC system, subunit C PJW08_01015 IPR001162 UvrC family homology region PJW08_01015 IPR038476 UvrC homology region 2 superfamily PJW08_01020 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase PJW08_01020 IPR001423 Lysophospholipase patatin, conserved site PJW08_01020 IPR002641 Patatin-like phospholipase domain PJW08_01025 IPR003029 S1 domain PJW08_01025 IPR022967 RNA-binding domain, S1 PJW08_01025 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G PJW08_01025 IPR012340 Nucleic acid-binding, OB-fold PJW08_01025 IPR004659 Ribonuclease E/G PJW08_01030 IPR000119 Histone-like DNA-binding protein PJW08_01030 IPR020816 Histone-like DNA-binding protein, conserved site PJW08_01030 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily PJW08_01060 IPR008969 Carboxypeptidase-like, regulatory domain superfamily PJW08_01060 IPR012910 TonB-dependent receptor, plug domain PJW08_01060 IPR037066 TonB-dependent receptor, plug domain superfamily PJW08_01060 IPR023996 TonB-dependent outer membrane protein, SusC/RagA PJW08_01060 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site PJW08_01060 IPR000531 TonB-dependent receptor-like, beta-barrel PJW08_01065 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site PJW08_01065 IPR037066 TonB-dependent receptor, plug domain superfamily PJW08_01065 IPR023996 TonB-dependent outer membrane protein, SusC/RagA PJW08_01065 IPR000531 TonB-dependent receptor-like, beta-barrel PJW08_01065 IPR012910 TonB-dependent receptor, plug domain PJW08_01065 IPR008969 Carboxypeptidase-like, regulatory domain superfamily PJW08_01110 IPR000620 EamA domain PJW08_01115 IPR011765 Peptidase M16, N-terminal PJW08_01115 IPR001431 Peptidase M16, zinc-binding site PJW08_01115 IPR007863 Peptidase M16, C-terminal PJW08_01115 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like PJW08_01130 IPR018261 Ribosomal protein L27, conserved site PJW08_01130 IPR001684 Ribosomal protein L27 PJW08_01135 IPR001789 Signal transduction response regulator, receiver domain PJW08_01135 IPR011006 CheY-like superfamily PJW08_01135 IPR007492 LytTR DNA-binding domain PJW08_01140 IPR011006 CheY-like superfamily PJW08_01140 IPR003594 Histidine kinase/HSP90-like ATPase PJW08_01140 IPR010559 Signal transduction histidine kinase, internal region PJW08_01140 IPR001789 Signal transduction response regulator, receiver domain PJW08_01140 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW08_01150 IPR000534 Semialdehyde dehydrogenase, NAD-binding PJW08_01150 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type PJW08_01150 IPR012080 Aspartate-semialdehyde dehydrogenase PJW08_01150 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site PJW08_01150 IPR012280 Semialdehyde dehydrogenase, dimerisation domain PJW08_01150 IPR036291 NAD(P)-binding domain superfamily PJW08_01165 IPR003660 HAMP domain PJW08_01165 IPR003594 Histidine kinase/HSP90-like ATPase PJW08_01165 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW08_01165 IPR005467 Histidine kinase domain PJW08_01165 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW08_01165 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW08_01165 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW08_01195 IPR004685 Branched-chain amino acid transport system II carrier protein PJW08_01200 IPR000073 Alpha/beta hydrolase fold-1 PJW08_01200 IPR000639 Epoxide hydrolase-like PJW08_01200 IPR029058 Alpha/Beta hydrolase fold PJW08_01210 IPR000836 Phosphoribosyltransferase domain PJW08_01210 IPR029057 Phosphoribosyltransferase-like PJW08_01225 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW08_01225 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type PJW08_01250 IPR034904 Fe-S cluster assembly domain superfamily PJW08_01250 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal PJW08_01255 IPR023753 FAD/NAD(P)-binding domain PJW08_01255 IPR036188 FAD/NAD(P)-binding domain superfamily PJW08_01255 IPR022890 Ferredoxin--NADP reductase, type 2 PJW08_01260 IPR006694 Fatty acid hydroxylase PJW08_01270 IPR023271 Aquaporin-like PJW08_01270 IPR000292 Formate/nitrite transporter PJW08_01270 IPR023999 Formate transporter FocA, putative PJW08_01270 IPR024002 Formate/nitrite transporter, conserved site PJW08_01275 IPR008254 Flavodoxin/nitric oxide synthase PJW08_01275 IPR001226 Flavodoxin, conserved site PJW08_01275 IPR010086 Flavodoxin, long chain PJW08_01275 IPR029039 Flavoprotein-like superfamily PJW08_01310 IPR012910 TonB-dependent receptor, plug domain PJW08_01310 IPR037066 TonB-dependent receptor, plug domain superfamily PJW08_01310 IPR039423 TonB-dependent receptor-like PJW08_01310 IPR000531 TonB-dependent receptor-like, beta-barrel PJW08_01310 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW08_01310 IPR010917 TonB-dependent receptor, conserved site PJW08_01310 IPR010105 TonB-dependent siderophore receptor PJW08_01315 IPR006683 Thioesterase domain PJW08_01315 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain PJW08_01315 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase PJW08_01315 IPR029069 HotDog domain superfamily PJW08_01320 IPR002549 Transmembrane protein TqsA-like PJW08_01345 IPR029044 Nucleotide-diphospho-sugar transferases PJW08_01345 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type PJW08_01345 IPR005835 Nucleotidyl transferase domain PJW08_01360 IPR008928 Six-hairpin glycosidase superfamily PJW08_01360 IPR012341 Six-hairpin glycosidase-like superfamily PJW08_01360 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily PJW08_01360 IPR018366 Carbohydrate-binding type-2, conserved site PJW08_01360 IPR023309 Endoglucanase F, domain 2 PJW08_01360 IPR027390 Endoglucanase F, domain 3 PJW08_01360 IPR003961 Fibronectin type III PJW08_01360 IPR036116 Fibronectin type III superfamily PJW08_01360 IPR000556 Glycoside hydrolase, 48F PJW08_01360 IPR013783 Immunoglobulin-like fold PJW08_01360 IPR012291 CBM2, carbohydrate-binding domain superfamily PJW08_01360 IPR001919 Carbohydrate-binding type-2 domain PJW08_01375 IPR011096 FTP domain PJW08_01375 IPR027268 Peptidase M4/M1, CTD superfamily PJW08_01375 IPR001570 Peptidase M4, C-terminal PJW08_01375 IPR013856 Peptidase M4 domain PJW08_01375 IPR023612 Peptidase M4 PJW08_01375 IPR025711 PepSY domain PJW08_01380 IPR001579 Glycoside hydrolase, chitinase active site PJW08_01380 IPR003610 Carbohydrate-binding module family 5/12 PJW08_01380 IPR036573 Carbohydrate-binding module superfamily 5/12 PJW08_01380 IPR011583 Chitinase II PJW08_01380 IPR029070 Chitinase insertion domain superfamily PJW08_01380 IPR003961 Fibronectin type III PJW08_01380 IPR036116 Fibronectin type III superfamily PJW08_01380 IPR001223 Glycoside hydrolase family 18, catalytic domain PJW08_01380 IPR017853 Glycoside hydrolase superfamily PJW08_01380 IPR013783 Immunoglobulin-like fold PJW08_01400 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW08_01400 IPR005467 Histidine kinase domain PJW08_01400 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW08_01400 IPR003594 Histidine kinase/HSP90-like ATPase PJW08_01400 IPR000014 PAS domain PJW08_01400 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW08_01400 IPR035965 PAS domain superfamily PJW08_01400 IPR013767 PAS fold PJW08_01400 IPR031967 PhoR, single Cache-like domain PJW08_01400 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW08_01415 IPR029045 ClpP/crotonase-like domain superfamily PJW08_01415 IPR001478 PDZ domain PJW08_01415 IPR036034 PDZ superfamily PJW08_01415 IPR004447 C-terminal-processing peptidase S41A PJW08_01415 IPR005151 Tail specific protease PJW08_01420 IPR020539 Ribonuclease P, conserved site PJW08_01420 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PJW08_01420 IPR000100 Ribonuclease P PJW08_01420 IPR020568 Ribosomal protein S5 domain 2-type fold PJW08_01440 IPR003538 Gram-negative bacterial TonB protein PJW08_01440 IPR006260 TonB/TolA, C-terminal PJW08_01440 IPR037682 TonB, C-terminal PJW08_01460 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily PJW08_01460 IPR029751 Ribosomal protein L25 PJW08_01460 IPR020057 Ribosomal protein L25, beta domain PJW08_01460 IPR037121 Ribosomal protein L25, C-terminal PJW08_01460 IPR001021 Ribosomal protein L25, long-form PJW08_01460 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal PJW08_01465 IPR036416 Peptidyl-tRNA hydrolase superfamily PJW08_01465 IPR018171 Peptidyl-tRNA hydrolase, conserved site PJW08_01465 IPR001328 Peptidyl-tRNA hydrolase PJW08_01495 IPR002528 Multi antimicrobial extrusion protein PJW08_01500 IPR016151 DNA mismatch repair protein MutS, N-terminal PJW08_01500 IPR036187 DNA mismatch repair protein MutS, core domain superfamily PJW08_01500 IPR007696 DNA mismatch repair protein MutS, core PJW08_01500 IPR007860 DNA mismatch repair protein MutS, connector domain PJW08_01500 IPR036678 MutS, connector domain superfamily PJW08_01500 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_01500 IPR017261 DNA mismatch repair protein MutS/MSH PJW08_01500 IPR000432 DNA mismatch repair protein MutS, C-terminal PJW08_01500 IPR007695 DNA mismatch repair protein MutS-like, N-terminal PJW08_01500 IPR005748 DNA mismatch repair protein MutS PJW08_01500 IPR007861 DNA mismatch repair protein MutS, clamp PJW08_01505 IPR007860 DNA mismatch repair protein MutS, connector domain PJW08_01505 IPR036678 MutS, connector domain superfamily PJW08_01505 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_01505 IPR036187 DNA mismatch repair protein MutS, core domain superfamily PJW08_01505 IPR016151 DNA mismatch repair protein MutS, N-terminal PJW08_01505 IPR000432 DNA mismatch repair protein MutS, C-terminal PJW08_01505 IPR007861 DNA mismatch repair protein MutS, clamp PJW08_01505 IPR017261 DNA mismatch repair protein MutS/MSH PJW08_01505 IPR007695 DNA mismatch repair protein MutS-like, N-terminal PJW08_01505 IPR005748 DNA mismatch repair protein MutS PJW08_01505 IPR007696 DNA mismatch repair protein MutS, core PJW08_01510 IPR005748 DNA mismatch repair protein MutS PJW08_01510 IPR007695 DNA mismatch repair protein MutS-like, N-terminal PJW08_01510 IPR017261 DNA mismatch repair protein MutS/MSH PJW08_01510 IPR000432 DNA mismatch repair protein MutS, C-terminal PJW08_01510 IPR007861 DNA mismatch repair protein MutS, clamp PJW08_01510 IPR007696 DNA mismatch repair protein MutS, core PJW08_01510 IPR016151 DNA mismatch repair protein MutS, N-terminal PJW08_01510 IPR036187 DNA mismatch repair protein MutS, core domain superfamily PJW08_01510 IPR007860 DNA mismatch repair protein MutS, connector domain PJW08_01510 IPR036678 MutS, connector domain superfamily PJW08_01510 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_01515 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_01515 IPR036678 MutS, connector domain superfamily PJW08_01515 IPR007860 DNA mismatch repair protein MutS, connector domain PJW08_01515 IPR036187 DNA mismatch repair protein MutS, core domain superfamily PJW08_01515 IPR016151 DNA mismatch repair protein MutS, N-terminal PJW08_01515 IPR000432 DNA mismatch repair protein MutS, C-terminal PJW08_01515 IPR007861 DNA mismatch repair protein MutS, clamp PJW08_01515 IPR017261 DNA mismatch repair protein MutS/MSH PJW08_01515 IPR007695 DNA mismatch repair protein MutS-like, N-terminal PJW08_01515 IPR005748 DNA mismatch repair protein MutS PJW08_01515 IPR007696 DNA mismatch repair protein MutS, core PJW08_01520 IPR001537 tRNA/rRNA methyltransferase, SpoU type PJW08_01520 IPR029028 Alpha/beta knot methyltransferases PJW08_01520 IPR004441 RNA methyltransferase TrmH family PJW08_01520 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PJW08_01520 IPR013123 RNA 2-O ribose methyltransferase, substrate binding PJW08_01530 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW08_01530 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain PJW08_01530 IPR003594 Histidine kinase/HSP90-like ATPase PJW08_01530 IPR017202 Sensor histidine kinase LiaS/VraS PJW08_01540 IPR018485 Carbohydrate kinase, FGGY, C-terminal PJW08_01540 IPR018483 Carbohydrate kinase, FGGY, conserved site PJW08_01540 IPR018484 Carbohydrate kinase, FGGY, N-terminal PJW08_01540 IPR005999 Glycerol kinase PJW08_01540 IPR000577 Carbohydrate kinase, FGGY PJW08_01545 IPR010101 TonB-dependent vitamin B12 transporter BtuB PJW08_01545 IPR039426 Vitamin B12 transporter BtuB-like PJW08_01545 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW08_01545 IPR010917 TonB-dependent receptor, conserved site PJW08_01545 IPR000531 TonB-dependent receptor-like, beta-barrel PJW08_01545 IPR037066 TonB-dependent receptor, plug domain superfamily PJW08_01545 IPR012910 TonB-dependent receptor, plug domain PJW08_01565 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like PJW08_01565 IPR004981 Tryptophan 2,3-dioxygenase PJW08_01565 IPR017485 Tryptophan 2,3-dioxygenase, bacterial PJW08_01575 IPR016047 Peptidase M23 PJW08_01575 IPR011055 Duplicated hybrid motif PJW08_01585 IPR008969 Carboxypeptidase-like, regulatory domain superfamily PJW08_01585 IPR023996 TonB-dependent outer membrane protein, SusC/RagA PJW08_01585 IPR037066 TonB-dependent receptor, plug domain superfamily PJW08_01585 IPR012910 TonB-dependent receptor, plug domain PJW08_01585 IPR000531 TonB-dependent receptor-like, beta-barrel PJW08_01585 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site PJW08_01625 IPR003448 Molybdopterin biosynthesis MoaE PJW08_01625 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily PJW08_01630 IPR015824 Phosphoglycerate kinase, N-terminal PJW08_01630 IPR036043 Phosphoglycerate kinase superfamily PJW08_01630 IPR001576 Phosphoglycerate kinase PJW08_01660 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel PJW08_01660 IPR027385 Outer membrane protein beta-barrel domain PJW08_01660 IPR006664 Outer membrane protein, bacterial PJW08_01660 IPR036737 OmpA-like domain superfamily PJW08_01660 IPR006665 OmpA-like domain PJW08_01670 IPR002306 Tryptophan-tRNA ligase PJW08_01670 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW08_01670 IPR002305 Aminoacyl-tRNA synthetase, class Ic PJW08_01670 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PJW08_01670 IPR024109 Tryptophan-tRNA ligase, bacterial-type PJW08_01680 IPR005744 Hly-III PJW08_01680 IPR004254 AdipoR/Haemolysin-III-related PJW08_01685 IPR023577 CYTH domain PJW08_01685 IPR033469 CYTH-like domain superfamily PJW08_01685 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like PJW08_01755 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PJW08_01755 IPR013655 PAS fold-3 PJW08_01755 IPR035965 PAS domain superfamily PJW08_01755 IPR000014 PAS domain PJW08_01755 IPR001610 PAC motif PJW08_01755 IPR003660 HAMP domain PJW08_01755 IPR004090 Chemotaxis methyl-accepting receptor PJW08_01765 IPR004090 Chemotaxis methyl-accepting receptor PJW08_01765 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PJW08_01765 IPR001610 PAC motif PJW08_01765 IPR000014 PAS domain PJW08_01765 IPR035965 PAS domain superfamily PJW08_01765 IPR013655 PAS fold-3 PJW08_01765 IPR003660 HAMP domain PJW08_01775 IPR012340 Nucleic acid-binding, OB-fold PJW08_01775 IPR000085 Bacterial DNA recombination protein RuvA PJW08_01775 IPR010994 RuvA domain 2-like PJW08_01775 IPR011114 Holliday junction DNA helicase RuvA, C-terminal PJW08_01775 IPR036267 RuvA, C-terminal domain superfamily PJW08_01775 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial PJW08_01800 IPR002930 Glycine cleavage system H-protein PJW08_01800 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PJW08_01800 IPR000089 Biotin/lipoyl attachment PJW08_01800 IPR033753 Glycine cleavage system H-protein/Simiate PJW08_01800 IPR017453 Glycine cleavage system H-protein, subgroup PJW08_01800 IPR011053 Single hybrid motif PJW08_01825 IPR006680 Amidohydrolase-related PJW08_01825 IPR004722 Dihydroorotase PJW08_01825 IPR011059 Metal-dependent hydrolase, composite domain superfamily PJW08_01825 IPR032466 Metal-dependent hydrolase PJW08_01825 IPR002195 Dihydroorotase, conserved site PJW08_01855 IPR024088 Tyrosine-tRNA ligase, bacterial-type PJW08_01855 IPR002305 Aminoacyl-tRNA synthetase, class Ic PJW08_01855 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW08_01855 IPR002942 RNA-binding S4 domain PJW08_01855 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 PJW08_01855 IPR036986 RNA-binding S4 domain superfamily PJW08_01855 IPR002307 Tyrosine-tRNA ligase PJW08_01880 IPR022394 Methylamine utilisation protein, MauG PJW08_01880 IPR009056 Cytochrome c-like domain PJW08_01880 IPR036909 Cytochrome c-like domain superfamily PJW08_01880 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase PJW08_01880 IPR004852 Di-haem cytochrome c peroxidase PJW08_01890 IPR012910 TonB-dependent receptor, plug domain PJW08_01890 IPR037066 TonB-dependent receptor, plug domain superfamily PJW08_01890 IPR000531 TonB-dependent receptor-like, beta-barrel PJW08_01890 IPR010916 TonB box, conserved site PJW08_01890 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW08_01890 IPR010917 TonB-dependent receptor, conserved site PJW08_01890 IPR039426 Vitamin B12 transporter BtuB-like PJW08_01895 IPR037066 TonB-dependent receptor, plug domain superfamily PJW08_01895 IPR010105 TonB-dependent siderophore receptor PJW08_01895 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW08_01895 IPR000531 TonB-dependent receptor-like, beta-barrel PJW08_01895 IPR039423 TonB-dependent receptor-like PJW08_01895 IPR012910 TonB-dependent receptor, plug domain PJW08_01925 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain PJW08_01925 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding PJW08_01925 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW08_01925 IPR015413 Methionyl/Leucyl tRNA synthetase PJW08_01925 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PJW08_01925 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding PJW08_01925 IPR002302 Leucine-tRNA ligase PJW08_01925 IPR025709 Leucyl-tRNA synthetase, editing domain PJW08_01940 IPR003703 Acyl-CoA thioesterase PJW08_01940 IPR029069 HotDog domain superfamily PJW08_01960 IPR036019 Gated mechanosensitive channel PJW08_01960 IPR019823 Large-conductance mechanosensitive channel, conserved site PJW08_01960 IPR001185 Large-conductance mechanosensitive channel PJW08_01960 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L PJW08_01970 IPR001267 Thymidine kinase PJW08_01970 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_02000 IPR028989 Ribosome maturation factor RimP, N-terminal PJW08_02000 IPR035956 RimP, N-terminal domain superfamily PJW08_02000 IPR003728 Ribosome maturation factor RimP PJW08_02175 IPR037066 TonB-dependent receptor, plug domain superfamily PJW08_02175 IPR039426 Vitamin B12 transporter BtuB-like PJW08_02175 IPR000531 TonB-dependent receptor-like, beta-barrel PJW08_02175 IPR010916 TonB box, conserved site PJW08_02175 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW08_02175 IPR010917 TonB-dependent receptor, conserved site PJW08_02175 IPR012910 TonB-dependent receptor, plug domain PJW08_02185 IPR006129 Adhesin B PJW08_02185 IPR006128 Adhesion lipoprotein PJW08_02185 IPR006127 Periplasmic solute binding protein, ZnuA-like PJW08_02190 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_02190 IPR017871 ABC transporter, conserved site PJW08_02190 IPR003593 AAA+ ATPase domain PJW08_02190 IPR003439 ABC transporter-like PJW08_02195 IPR037294 ABC transporter, BtuC-like PJW08_02195 IPR001626 ABC transporter, TroCD-like PJW08_02200 IPR001626 ABC transporter, TroCD-like PJW08_02200 IPR037294 ABC transporter, BtuC-like PJW08_02205 IPR034739 UvrD/AddA helicase, N-terminal PJW08_02205 IPR014016 UvrD-like helicase, ATP-binding domain PJW08_02205 IPR011335 Restriction endonuclease type II-like PJW08_02205 IPR014017 UvrD-like DNA helicase, C-terminal PJW08_02205 IPR004586 RecBCD enzyme subunit RecB PJW08_02205 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type PJW08_02205 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_02205 IPR011604 Exonuclease, phage-type/RecB, C-terminal PJW08_02205 IPR000212 DNA helicase, UvrD/REP type PJW08_02215 IPR011335 Restriction endonuclease type II-like PJW08_02215 IPR034739 UvrD/AddA helicase, N-terminal PJW08_02215 IPR014152 DNA helicase subunit AddA PJW08_02215 IPR014017 UvrD-like DNA helicase, C-terminal PJW08_02215 IPR000212 DNA helicase, UvrD/REP type PJW08_02215 IPR014016 UvrD-like helicase, ATP-binding domain PJW08_02215 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type PJW08_02215 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_02215 IPR011604 Exonuclease, phage-type/RecB, C-terminal PJW08_02240 IPR006312 Sec-independent protein translocase protein TatA/E PJW08_02240 IPR003369 Sec-independent protein translocase protein TatA/B/E PJW08_02250 IPR040442 Pyruvate kinase-like domain superfamily PJW08_02250 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily PJW08_02250 IPR003700 Ketopantoate hydroxymethyltransferase PJW08_02255 IPR036291 NAD(P)-binding domain superfamily PJW08_02255 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PJW08_02255 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain PJW08_02255 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PJW08_02280 IPR005814 Aminotransferase class-III PJW08_02280 IPR015424 Pyridoxal phosphate-dependent transferase PJW08_02280 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW08_02280 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA PJW08_02280 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW08_02290 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site PJW08_02290 IPR004839 Aminotransferase, class I/classII PJW08_02290 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type PJW08_02290 IPR015424 Pyridoxal phosphate-dependent transferase PJW08_02290 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW08_02290 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW08_02305 IPR005475 Transketolase-like, pyrimidine-binding domain PJW08_02305 IPR029061 Thiamin diphosphate-binding fold PJW08_02305 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal PJW08_02305 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily PJW08_02305 IPR023784 2-oxoglutarate dehydrogenase E1 component, bacterial PJW08_02305 IPR011603 2-oxoglutarate dehydrogenase E1 component PJW08_02305 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain PJW08_02305 IPR001017 Dehydrogenase, E1 component PJW08_02310 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PJW08_02310 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain PJW08_02310 IPR000089 Biotin/lipoyl attachment PJW08_02310 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily PJW08_02310 IPR036625 E3-binding domain superfamily PJW08_02310 IPR004167 Peripheral subunit-binding domain PJW08_02310 IPR011053 Single hybrid motif PJW08_02310 IPR006255 Dihydrolipoamide succinyltransferase PJW08_02320 IPR036986 RNA-binding S4 domain superfamily PJW08_02320 IPR006145 Pseudouridine synthase, RsuA/RluA PJW08_02320 IPR002942 RNA-binding S4 domain PJW08_02320 IPR006225 Pseudouridine synthase, RluC/RluD PJW08_02320 IPR020103 Pseudouridine synthase, catalytic domain superfamily PJW08_02320 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site PJW08_02325 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_02325 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC PJW08_02325 IPR006073 GTP binding domain PJW08_02325 IPR030393 EngB-type guanine nucleotide-binding (G) domain PJW08_02335 IPR003444 Transcriptional regulator MraZ PJW08_02335 IPR035644 MraZ, C-terminal PJW08_02335 IPR020603 MraZ domain PJW08_02335 IPR035642 MraZ, N-terminal PJW08_02335 IPR038619 MraZ superfamily PJW08_02335 IPR007159 SpoVT-AbrB domain PJW08_02335 IPR037914 SpoVT-AbrB domain superfamily PJW08_02340 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW08_02340 IPR002903 Ribosomal RNA small subunit methyltransferase H PJW08_02340 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily PJW08_02355 IPR012338 Beta-lactamase/transpeptidase-like PJW08_02355 IPR005311 Penicillin-binding protein, dimerisation domain PJW08_02355 IPR036138 Penicillin-binding protein, dimerisation domain superfamily PJW08_02355 IPR001460 Penicillin-binding protein, transpeptidase PJW08_02355 IPR011927 Stage V sporulation protein D PJW08_02355 IPR005543 PASTA domain PJW08_02360 IPR036565 Mur-like, catalytic domain superfamily PJW08_02360 IPR004101 Mur ligase, C-terminal PJW08_02360 IPR036615 Mur ligase, C-terminal domain superfamily PJW08_02360 IPR013221 Mur ligase, central PJW08_02360 IPR035911 MurE/MurF, N-terminal PJW08_02360 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase PJW08_02360 IPR000713 Mur ligase, N-terminal catalytic domain PJW08_02365 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site PJW08_02365 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase PJW08_02365 IPR000715 Glycosyl transferase, family 4 PJW08_02380 IPR004276 Glycosyltransferase family 28, N-terminal domain PJW08_02380 IPR007235 Glycosyl transferase, family 28, C-terminal PJW08_02380 IPR006009 N-acetylglucosaminyltransferase, MurG PJW08_02400 IPR003008 Tubulin/FtsZ, GTPase domain PJW08_02400 IPR036525 Tubulin/FtsZ, GTPase domain superfamily PJW08_02400 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain PJW08_02400 IPR000158 Cell division protein FtsZ PJW08_02400 IPR024757 Cell division protein FtsZ, C-terminal PJW08_02400 IPR020805 Cell division protein FtsZ, conserved site PJW08_02400 IPR008280 Tubulin/FtsZ, C-terminal PJW08_02405 IPR019004 Uncharacterised protein YqeY/Aim41 PJW08_02405 IPR042184 YqeY/Aim41, N-terminal domain PJW08_02405 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like PJW08_02405 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 PJW08_02420 IPR000644 CBS domain PJW08_02430 IPR036388 Winged helix-like DNA-binding domain superfamily PJW08_02430 IPR014284 RNA polymerase sigma-70 like domain PJW08_02430 IPR000943 RNA polymerase sigma-70 PJW08_02430 IPR009042 RNA polymerase sigma-70 region 1.2 PJW08_02430 IPR007624 RNA polymerase sigma-70 region 3 PJW08_02430 IPR007630 RNA polymerase sigma-70 region 4 PJW08_02430 IPR007127 RNA polymerase sigma factor 70, region 1.1 PJW08_02430 IPR042189 Sigma-70 factor, region 1.1 superfamily PJW08_02430 IPR013325 RNA polymerase sigma factor, region 2 PJW08_02430 IPR013324 RNA polymerase sigma factor, region 3/4-like PJW08_02430 IPR012760 RNA polymerase sigma factor RpoD, C-terminal PJW08_02430 IPR028630 RNA polymerase sigma factor RpoD PJW08_02430 IPR007627 RNA polymerase sigma-70 region 2 PJW08_02435 IPR013324 RNA polymerase sigma factor, region 3/4-like PJW08_02435 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site PJW08_02435 IPR014284 RNA polymerase sigma-70 like domain PJW08_02435 IPR036388 Winged helix-like DNA-binding domain superfamily PJW08_02435 IPR039425 RNA polymerase sigma-70 like PJW08_02435 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 PJW08_02435 IPR013325 RNA polymerase sigma factor, region 2 PJW08_02435 IPR007627 RNA polymerase sigma-70 region 2 PJW08_02440 IPR039425 RNA polymerase sigma-70 like PJW08_02440 IPR014284 RNA polymerase sigma-70 like domain PJW08_02440 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site PJW08_02440 IPR007627 RNA polymerase sigma-70 region 2 PJW08_02440 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 PJW08_02440 IPR013325 RNA polymerase sigma factor, region 2 PJW08_02440 IPR013324 RNA polymerase sigma factor, region 3/4-like PJW08_02440 IPR036388 Winged helix-like DNA-binding domain superfamily PJW08_02460 IPR023576 UbiE/COQ5 methyltransferase, conserved site PJW08_02460 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW08_02460 IPR004033 UbiE/COQ5 methyltransferase PJW08_02465 IPR034904 Fe-S cluster assembly domain superfamily PJW08_02465 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal PJW08_02500 IPR002583 Ribosomal protein S20 PJW08_02500 IPR036510 Ribosomal protein S20 superfamily PJW08_02525 IPR003824 Undecaprenyl-diphosphatase UppP PJW08_02535 IPR004513 Cell division protein FtsX PJW08_02535 IPR040690 FtsX, extracellular domain PJW08_02540 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PJW08_02540 IPR018146 Glyoxalase I, conserved site PJW08_02540 IPR017515 Methylmalonyl-CoA epimerase PJW08_02540 IPR037523 Vicinal oxygen chelate (VOC) domain PJW08_02545 IPR000238 Ribosome-binding factor A PJW08_02545 IPR023799 Ribosome-binding factor A domain superfamily PJW08_02545 IPR015946 K homology domain-like, alpha/beta PJW08_02570 IPR001269 tRNA-dihydrouridine synthase PJW08_02570 IPR013785 Aldolase-type TIM barrel PJW08_02570 IPR035587 DUS-like, FMN-binding domain PJW08_02570 IPR032887 tRNA-dihydrouridine synthase B PJW08_02570 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal PJW08_02570 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 PJW08_02570 IPR018517 tRNA-dihydrouridine synthase, conserved site PJW08_02585 IPR005025 NADPH-dependent FMN reductase-like PJW08_02585 IPR029039 Flavoprotein-like superfamily PJW08_02605 IPR037066 TonB-dependent receptor, plug domain superfamily PJW08_02605 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site PJW08_02605 IPR023996 TonB-dependent outer membrane protein, SusC/RagA PJW08_02605 IPR012910 TonB-dependent receptor, plug domain PJW08_02605 IPR000531 TonB-dependent receptor-like, beta-barrel PJW08_02605 IPR008969 Carboxypeptidase-like, regulatory domain superfamily PJW08_02625 IPR002898 MotA/TolQ/ExbB proton channel PJW08_02635 IPR003400 Biopolymer transport protein ExbD/TolR PJW08_02675 IPR002661 Ribosome recycling factor PJW08_02675 IPR036191 RRF superfamily PJW08_02675 IPR023584 Ribosome recycling factor domain PJW08_02680 IPR011817 Uridylate kinase PJW08_02680 IPR015963 Uridylate kinase, bacteria PJW08_02680 IPR036393 Acetylglutamate kinase-like superfamily PJW08_02680 IPR001048 Aspartate/glutamate/uridylate kinase PJW08_02685 IPR009060 UBA-like superfamily PJW08_02685 IPR036402 Elongation factor Ts, dimerisation domain superfamily PJW08_02685 IPR018101 Translation elongation factor Ts, conserved site PJW08_02685 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation PJW08_02685 IPR001816 Translation elongation factor EFTs/EF1B PJW08_02725 IPR001714 Peptidase M24, methionine aminopeptidase PJW08_02725 IPR036005 Creatinase/aminopeptidase-like PJW08_02725 IPR000994 Peptidase M24 PJW08_02725 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 PJW08_02765 IPR008949 Isoprenoid synthase domain superfamily PJW08_02765 IPR002060 Squalene/phytoene synthase PJW08_02765 IPR019845 Squalene/phytoene synthase, conserved site PJW08_02765 IPR033904 Trans-Isoprenyl Diphosphate Synthases, head-to-head PJW08_02770 IPR006694 Fatty acid hydroxylase PJW08_02790 IPR011009 Protein kinase-like domain superfamily PJW08_02790 IPR000719 Protein kinase domain PJW08_02790 IPR004147 UbiB domain PJW08_02810 IPR036291 NAD(P)-binding domain superfamily PJW08_02810 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW08_02810 IPR002347 Short-chain dehydrogenase/reductase SDR PJW08_02820 IPR036249 Thioredoxin-like superfamily PJW08_02820 IPR000889 Glutathione peroxidase PJW08_02820 IPR029760 Glutathione peroxidase conserved site PJW08_02830 IPR002081 Cryptochrome/DNA photolyase class 1 PJW08_02830 IPR019947 DNA photolyase class 1, 8-HDF type PJW08_02830 IPR006050 DNA photolyase, N-terminal PJW08_02830 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal PJW08_02830 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain PJW08_02830 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW08_02830 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily PJW08_02830 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily PJW08_02850 IPR000531 TonB-dependent receptor-like, beta-barrel PJW08_02850 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site PJW08_02850 IPR008969 Carboxypeptidase-like, regulatory domain superfamily PJW08_02850 IPR037066 TonB-dependent receptor, plug domain superfamily PJW08_02850 IPR023996 TonB-dependent outer membrane protein, SusC/RagA PJW08_02850 IPR012910 TonB-dependent receptor, plug domain PJW08_02900 IPR006696 Protein of unknown function DUF423 PJW08_02915 IPR002569 Peptide methionine sulphoxide reductase MsrA PJW08_02915 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily PJW08_02920 IPR011057 Mss4-like superfamily PJW08_02920 IPR028427 Peptide methionine sulfoxide reductase PJW08_02920 IPR002579 Peptide methionine sulphoxide reductase MrsB PJW08_02990 IPR036291 NAD(P)-binding domain superfamily PJW08_02990 IPR003462 Ornithine cyclodeaminase/mu-crystallin PJW08_02990 IPR023401 Ornithine cyclodeaminase, N-terminal PJW08_02995 IPR008794 Proline racemase family PJW08_03000 IPR004636 Acetylornithine/Succinylornithine transaminase family PJW08_03000 IPR005814 Aminotransferase class-III PJW08_03000 IPR037537 [LysW]-aminoadipate semialdehyde/glutamate semialdehyde transaminase PJW08_03000 IPR015424 Pyridoxal phosphate-dependent transferase PJW08_03000 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW08_03000 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW08_03005 IPR011335 Restriction endonuclease type II-like PJW08_03005 IPR007560 Restriction endonuclease type IV, Mrr PJW08_03005 IPR025745 Restriction system protein Mrr-like N-terminal domain PJW08_03015 IPR036005 Creatinase/aminopeptidase-like PJW08_03015 IPR000994 Peptidase M24 PJW08_03015 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site PJW08_03015 IPR000587 Creatinase, N-terminal PJW08_03015 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PJW08_03030 IPR007865 Aminopeptidase P, N-terminal PJW08_03030 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PJW08_03030 IPR036005 Creatinase/aminopeptidase-like PJW08_03030 IPR000994 Peptidase M24 PJW08_03030 IPR001714 Peptidase M24, methionine aminopeptidase PJW08_03030 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site PJW08_03065 IPR018060 DNA binding HTH domain, AraC-type PJW08_03065 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like PJW08_03065 IPR009057 Homeobox-like domain superfamily PJW08_03065 IPR018062 HTH domain AraC-type, conserved site PJW08_03065 IPR020449 Transcription regulator HTH, AraC- type PJW08_03070 IPR033134 Asp/Glu racemase, active site 2 PJW08_03070 IPR018187 Asp/Glu racemase, active site 1 PJW08_03070 IPR004391 Glutamate racemase PJW08_03070 IPR015942 Asp/Glu/hydantoin racemase PJW08_03070 IPR001920 Asp/Glu racemase PJW08_03110 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ PJW08_03110 IPR036130 Pyridoxine 5'-phosphate synthase PJW08_03110 IPR013785 Aldolase-type TIM barrel PJW08_03120 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV PJW08_03150 IPR022310 NAD/GMP synthase PJW08_03150 IPR003694 NAD(+) synthetase PJW08_03150 IPR022926 NH(3)-dependent NAD(+) synthetase PJW08_03150 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW08_03170 IPR011006 CheY-like superfamily PJW08_03170 IPR002545 CheW-like domain PJW08_03170 IPR001789 Signal transduction response regulator, receiver domain PJW08_03170 IPR024181 Chemotaxis response regulator CheV PJW08_03170 IPR036061 CheW-like domain superfamily PJW08_03175 IPR011006 CheY-like superfamily PJW08_03175 IPR016032 Signal transduction response regulator, C-terminal effector PJW08_03175 IPR001789 Signal transduction response regulator, receiver domain PJW08_03175 IPR000792 Transcription regulator LuxR, C-terminal PJW08_03175 IPR036388 Winged helix-like DNA-binding domain superfamily PJW08_03195 IPR009068 S15/NS1, RNA-binding PJW08_03195 IPR005290 Ribosomal protein S15, bacterial-type PJW08_03195 IPR000589 Ribosomal protein S15 PJW08_03200 IPR034733 Acetyl-CoA carboxylase PJW08_03200 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit PJW08_03200 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal PJW08_03200 IPR029045 ClpP/crotonase-like domain superfamily PJW08_03205 IPR000771 Fructose-bisphosphate aldolase, class-II PJW08_03205 IPR013785 Aldolase-type TIM barrel PJW08_03205 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype PJW08_03220 IPR029028 Alpha/beta knot methyltransferases PJW08_03220 IPR029064 50S ribosomal protein L30e-like PJW08_03220 IPR001537 tRNA/rRNA methyltransferase, SpoU type PJW08_03220 IPR013123 RNA 2-O ribose methyltransferase, substrate binding PJW08_03220 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PJW08_03260 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain PJW08_03260 IPR000544 Octanoyltransferase PJW08_03260 IPR020605 Octanoyltransferase, conserved site PJW08_03265 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PJW08_03265 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily PJW08_03265 IPR023480 Uncharacterised protein family UPF0312/YceI PJW08_03300 IPR003732 D-aminoacyl-tRNA deacylase DTD PJW08_03300 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily PJW08_03305 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_03305 IPR012340 Nucleic acid-binding, OB-fold PJW08_03305 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal PJW08_03305 IPR004881 Ribosome biogenesis GTPase RsgA PJW08_03305 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain PJW08_03305 IPR010914 RsgA GTPase domain PJW08_03310 IPR006218 DAHP synthetase I/KDSA PJW08_03310 IPR041071 DAHP synthase ferredoxin-like domain PJW08_03310 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 PJW08_03310 IPR013785 Aldolase-type TIM barrel PJW08_03315 IPR011277 Chorismate mutase, T-protein PJW08_03315 IPR003099 Prephenate dehydrogenase PJW08_03315 IPR036291 NAD(P)-binding domain superfamily PJW08_03315 IPR002701 Chorismate mutase II, prokaryotic-type PJW08_03315 IPR036979 Chorismate mutase domain superfamily PJW08_03315 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein PJW08_03315 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PJW08_03315 IPR036263 Chorismate mutase type II superfamily PJW08_03410 IPR004372 Acetate/propionate kinase PJW08_03410 IPR000890 Aliphatic acid kinase, short-chain PJW08_03410 IPR023865 Aliphatic acid kinase, short-chain, conserved site PJW08_03415 IPR020103 Pseudouridine synthase, catalytic domain superfamily PJW08_03415 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain PJW08_03415 IPR020095 Pseudouridine synthase I, TruA, C-terminal PJW08_03415 IPR001406 Pseudouridine synthase I, TruA PJW08_03425 IPR005338 Anhydro-N-acetylmuramic acid kinase PJW08_03435 IPR004671 Na+/H+ antiporter NhaB PJW08_03440 IPR004671 Na+/H+ antiporter NhaB PJW08_03445 IPR002898 MotA/TolQ/ExbB proton channel PJW08_03460 IPR018109 Folylpolyglutamate synthetase, conserved site PJW08_03460 IPR036565 Mur-like, catalytic domain superfamily PJW08_03460 IPR004101 Mur ligase, C-terminal PJW08_03460 IPR036615 Mur ligase, C-terminal domain superfamily PJW08_03460 IPR013221 Mur ligase, central PJW08_03460 IPR001645 Folylpolyglutamate synthetase PJW08_03480 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PJW08_03480 IPR036291 NAD(P)-binding domain superfamily PJW08_03480 IPR017476 UDP-glucose/GDP-mannose dehydrogenase PJW08_03480 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal PJW08_03480 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation PJW08_03480 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily PJW08_03480 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal PJW08_03480 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type PJW08_03495 IPR036291 NAD(P)-binding domain superfamily PJW08_03495 IPR000683 Oxidoreductase, N-terminal PJW08_03495 IPR004104 Oxidoreductase, C-terminal PJW08_03515 IPR001509 NAD-dependent epimerase/dehydratase PJW08_03515 IPR036291 NAD(P)-binding domain superfamily PJW08_03530 IPR004268 Peptidoglycan biosynthesis protein MurJ PJW08_03535 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain PJW08_03535 IPR036291 NAD(P)-binding domain superfamily PJW08_03535 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain PJW08_03565 IPR001296 Glycosyl transferase, family 1 PJW08_03580 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form PJW08_03580 IPR029044 Nucleotide-diphospho-sugar transferases PJW08_03580 IPR005835 Nucleotidyl transferase domain PJW08_03585 IPR011051 RmlC-like cupin domain superfamily PJW08_03585 IPR014710 RmlC-like jelly roll fold PJW08_03585 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related PJW08_03590 IPR016040 NAD(P)-binding domain PJW08_03590 IPR036291 NAD(P)-binding domain superfamily PJW08_03590 IPR005888 dTDP-glucose 4,6-dehydratase PJW08_03615 IPR016192 APOBEC/CMP deaminase, zinc-binding PJW08_03615 IPR002125 Cytidine and deoxycytidylate deaminase domain PJW08_03615 IPR006262 Cytidine deaminase, homotetrameric PJW08_03615 IPR016193 Cytidine deaminase-like PJW08_03630 IPR004101 Mur ligase, C-terminal PJW08_03630 IPR036615 Mur ligase, C-terminal domain superfamily PJW08_03630 IPR013221 Mur ligase, central PJW08_03630 IPR000713 Mur ligase, N-terminal catalytic domain PJW08_03630 IPR035911 MurE/MurF, N-terminal PJW08_03630 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase PJW08_03630 IPR036565 Mur-like, catalytic domain superfamily PJW08_03650 IPR003817 Phosphatidylserine decarboxylase-related PJW08_03650 IPR033177 Phosphatidylserine decarboxylase PJW08_03650 IPR033179 Phosphatidylserine decarboxylase, prokaryotic type 2 PJW08_03670 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_03670 IPR026008 Uridine kinase PJW08_03670 IPR000764 Uridine kinase-like PJW08_03670 IPR006083 Phosphoribulokinase/uridine kinase PJW08_03695 IPR003313 AraC-type arabinose-binding/dimerisation domain PJW08_03695 IPR037923 Transcription regulator HTH-like PJW08_03695 IPR018060 DNA binding HTH domain, AraC-type PJW08_03695 IPR018062 HTH domain AraC-type, conserved site PJW08_03695 IPR014710 RmlC-like jelly roll fold PJW08_03695 IPR020449 Transcription regulator HTH, AraC- type PJW08_03695 IPR009057 Homeobox-like domain superfamily PJW08_03715 IPR003691 Putative fluoride ion transporter CrcB PJW08_03730 IPR006390 Dihydropteroate synthase PJW08_03730 IPR011005 Dihydropteroate synthase-like PJW08_03730 IPR000489 Pterin-binding domain PJW08_03735 IPR014046 Diadenylate cyclase PJW08_03735 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily PJW08_03735 IPR003390 DNA integrity scanning protein, DisA, N-terminal PJW08_03735 IPR034701 Diadenylate cyclase CdaA PJW08_03750 IPR020103 Pseudouridine synthase, catalytic domain superfamily PJW08_03750 IPR001406 Pseudouridine synthase I, TruA PJW08_03750 IPR020095 Pseudouridine synthase I, TruA, C-terminal PJW08_03750 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain PJW08_03760 IPR003594 Histidine kinase/HSP90-like ATPase PJW08_03760 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW08_03760 IPR005467 Histidine kinase domain PJW08_03760 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW08_03760 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain PJW08_03760 IPR017203 Signal transduction histidine kinase, NreB PJW08_03790 IPR011006 CheY-like superfamily PJW08_03790 IPR016032 Signal transduction response regulator, C-terminal effector PJW08_03790 IPR000792 Transcription regulator LuxR, C-terminal PJW08_03790 IPR001789 Signal transduction response regulator, receiver domain PJW08_03815 IPR038056 YjbR-like superfamily PJW08_03815 IPR007351 Uncharacterised protein YjbR PJW08_03825 IPR036188 FAD/NAD(P)-binding domain superfamily PJW08_03825 IPR023753 FAD/NAD(P)-binding domain PJW08_03825 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site PJW08_03825 IPR005982 Thioredoxin reductase PJW08_03835 IPR040626 Cytosolic carboxypeptidase, N-terminal PJW08_03835 IPR000834 Peptidase M14, carboxypeptidase A PJW08_03840 IPR040626 Cytosolic carboxypeptidase, N-terminal PJW08_03840 IPR000834 Peptidase M14, carboxypeptidase A PJW08_03860 IPR036737 OmpA-like domain superfamily PJW08_03860 IPR000498 Outer membrane protein OmpA-like, transmembrane domain PJW08_03860 IPR006690 Outer membrane protein, OmpA-like, conserved site PJW08_03860 IPR006664 Outer membrane protein, bacterial PJW08_03860 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel PJW08_03860 IPR002368 Outer membrane protein, OmpA PJW08_03860 IPR006665 OmpA-like domain PJW08_03890 IPR023214 HAD superfamily PJW08_03890 IPR010976 Beta-phosphoglucomutase hydrolase PJW08_03890 IPR036412 HAD-like superfamily PJW08_03890 IPR006439 HAD hydrolase, subfamily IA PJW08_03890 IPR041492 Haloacid dehalogenase-like hydrolase PJW08_03890 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PJW08_03915 IPR008104 Macrophage infectivity potentiator PJW08_03915 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain PJW08_03915 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal PJW08_03915 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily PJW08_03920 IPR029000 Cyclophilin-like domain superfamily PJW08_03920 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site PJW08_03920 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain PJW08_03925 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily PJW08_03925 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PJW08_03930 IPR033114 Cas9-type HNH domain PJW08_03930 IPR028629 CRISPR-associated endonuclease Cas9 PJW08_03930 IPR036397 Ribonuclease H superfamily PJW08_03930 IPR041383 RuvC endonuclease subdomain 3 PJW08_03930 IPR003615 HNH nuclease PJW08_03935 IPR021127 CRISPR-associated endonuclease Cas2 PJW08_03935 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 PJW08_03960 IPR023842 Bacillithiol biosynthesis deacetylase, BshB1 PJW08_03960 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related PJW08_03960 IPR024078 Putative deacetylase LmbE-like domain superfamily PJW08_04070 IPR000498 Outer membrane protein OmpA-like, transmembrane domain PJW08_04070 IPR036737 OmpA-like domain superfamily PJW08_04070 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel PJW08_04070 IPR006664 Outer membrane protein, bacterial PJW08_04070 IPR006690 Outer membrane protein, OmpA-like, conserved site PJW08_04070 IPR002368 Outer membrane protein, OmpA PJW08_04070 IPR006665 OmpA-like domain PJW08_04100 IPR003774 Protein of unknown function UPF0301 PJW08_04105 IPR001789 Signal transduction response regulator, receiver domain PJW08_04105 IPR007492 LytTR DNA-binding domain PJW08_04105 IPR011006 CheY-like superfamily PJW08_04110 IPR003594 Histidine kinase/HSP90-like ATPase PJW08_04110 IPR010559 Signal transduction histidine kinase, internal region PJW08_04110 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW08_04125 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase PJW08_04125 IPR001433 Oxidoreductase FAD/NAD(P)-binding PJW08_04125 IPR008254 Flavodoxin/nitric oxide synthase PJW08_04125 IPR001094 Flavodoxin-like PJW08_04125 IPR017927 FAD-binding domain, ferredoxin reductase-type PJW08_04125 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria PJW08_04125 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding PJW08_04125 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain PJW08_04125 IPR017938 Riboflavin synthase-like beta-barrel PJW08_04125 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily PJW08_04125 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PJW08_04125 IPR029039 Flavoprotein-like superfamily PJW08_04145 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW08_04145 IPR010916 TonB box, conserved site PJW08_04145 IPR000531 TonB-dependent receptor-like, beta-barrel PJW08_04145 IPR037066 TonB-dependent receptor, plug domain superfamily PJW08_04145 IPR012910 TonB-dependent receptor, plug domain PJW08_04145 IPR039426 Vitamin B12 transporter BtuB-like PJW08_04145 IPR010917 TonB-dependent receptor, conserved site PJW08_04165 IPR039425 RNA polymerase sigma-70 like PJW08_04165 IPR014284 RNA polymerase sigma-70 like domain PJW08_04165 IPR007627 RNA polymerase sigma-70 region 2 PJW08_04165 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 PJW08_04165 IPR013325 RNA polymerase sigma factor, region 2 PJW08_04165 IPR013324 RNA polymerase sigma factor, region 3/4-like PJW08_04165 IPR036388 Winged helix-like DNA-binding domain superfamily PJW08_04170 IPR011257 DNA glycosylase PJW08_04170 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal PJW08_04170 IPR003265 HhH-GPD domain PJW08_04170 IPR004035 Endonuclease III, iron-sulphur binding site PJW08_04170 IPR005759 Endonuclease III PJW08_04170 IPR004036 Endonuclease III-like, conserved site-2 PJW08_04170 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif PJW08_04170 IPR000445 Helix-hairpin-helix motif PJW08_04175 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant PJW08_04175 IPR036249 Thioredoxin-like superfamily PJW08_04175 IPR013766 Thioredoxin domain PJW08_04190 IPR032466 Metal-dependent hydrolase PJW08_04190 IPR006680 Amidohydrolase-related PJW08_04190 IPR002195 Dihydroorotase, conserved site PJW08_04190 IPR011059 Metal-dependent hydrolase, composite domain superfamily PJW08_04190 IPR004722 Dihydroorotase PJW08_04210 IPR011199 Bacillithiol biosynthesis BshC PJW08_04215 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW08_04215 IPR016909 Ribosomal RNA large subunit methyltransferase F PJW08_04215 IPR010286 METTL16/RlmF family PJW08_04220 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW08_04220 IPR016909 Ribosomal RNA large subunit methyltransferase F PJW08_04220 IPR010286 METTL16/RlmF family PJW08_04235 IPR023940 Dihydrodipicolinate reductase PJW08_04235 IPR036291 NAD(P)-binding domain superfamily PJW08_04235 IPR000846 Dihydrodipicolinate reductase, N-terminal PJW08_04235 IPR022663 Dihydrodipicolinate reductase, C-terminal PJW08_04235 IPR022664 Dihydrodipicolinate reductase, conserved site PJW08_04260 IPR022488 Polyphosphate kinase-2-related PJW08_04260 IPR016898 Polyphosphate kinase 2 PJW08_04260 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_04260 IPR022486 Polyphosphate kinase 2, PA0141 PJW08_04275 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site PJW08_04275 IPR016454 Cysteine desulfurase PJW08_04275 IPR015424 Pyridoxal phosphate-dependent transferase PJW08_04275 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW08_04275 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW08_04275 IPR000192 Aminotransferase class V domain PJW08_04290 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PJW08_04290 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 PJW08_04290 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria PJW08_04290 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily PJW08_04295 IPR003758 Tetraacyldisaccharide 4'-kinase PJW08_04295 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_04300 IPR013766 Thioredoxin domain PJW08_04300 IPR036249 Thioredoxin-like superfamily PJW08_04305 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_04305 IPR017871 ABC transporter, conserved site PJW08_04305 IPR003439 ABC transporter-like PJW08_04305 IPR003593 AAA+ ATPase domain PJW08_04305 IPR015854 ABC transporter, lipoprotein release, LolD PJW08_04390 IPR012156 Cold shock, CspA PJW08_04390 IPR019844 Cold-shock (CSD) domain PJW08_04390 IPR002059 Cold-shock protein, DNA-binding PJW08_04390 IPR012340 Nucleic acid-binding, OB-fold PJW08_04390 IPR011129 Cold shock domain PJW08_04395 IPR019844 Cold-shock (CSD) domain PJW08_04395 IPR012340 Nucleic acid-binding, OB-fold PJW08_04395 IPR002059 Cold-shock protein, DNA-binding PJW08_04395 IPR012156 Cold shock, CspA PJW08_04395 IPR011129 Cold shock domain PJW08_04400 IPR012156 Cold shock, CspA PJW08_04400 IPR011129 Cold shock domain PJW08_04400 IPR019844 Cold-shock (CSD) domain PJW08_04400 IPR002059 Cold-shock protein, DNA-binding PJW08_04400 IPR012340 Nucleic acid-binding, OB-fold PJW08_04405 IPR019240 Protein of unknown function DUF2196 PJW08_04425 IPR006638 Elp3/MiaB/NifB PJW08_04425 IPR005839 Methylthiotransferase PJW08_04425 IPR020612 Methylthiotransferase, conserved site PJW08_04425 IPR013848 Methylthiotransferase, N-terminal PJW08_04425 IPR038135 Methylthiotransferase, N-terminal domain superfamily PJW08_04425 IPR006467 MiaB-like tRNA modifying enzyme PJW08_04425 IPR007197 Radical SAM PJW08_04425 IPR034557 Threonylcarbamoyladenosine tRNA methylthiotransferase PJW08_04425 IPR002792 TRAM domain PJW08_04425 IPR023404 Radical SAM, alpha/beta horseshoe PJW08_04440 IPR007138 Antibiotic biosynthesis monooxygenase domain PJW08_04440 IPR011008 Dimeric alpha-beta barrel PJW08_04445 IPR000914 Solute-binding protein family 5 domain PJW08_04445 IPR030678 Peptide/nickel binding protein, MppA-type PJW08_04445 IPR039424 Solute-binding protein family 5 PJW08_04475 IPR034964 Lumazine synthase PJW08_04475 IPR002180 Lumazine/riboflavin synthase PJW08_04475 IPR036467 Lumazine/riboflavin synthase superfamily PJW08_04480 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel PJW08_04480 IPR006664 Outer membrane protein, bacterial PJW08_04480 IPR002368 Outer membrane protein, OmpA PJW08_04480 IPR006665 OmpA-like domain PJW08_04480 IPR006690 Outer membrane protein, OmpA-like, conserved site PJW08_04480 IPR036737 OmpA-like domain superfamily PJW08_04480 IPR000498 Outer membrane protein OmpA-like, transmembrane domain PJW08_04510 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial PJW08_04510 IPR018225 Transaldolase, active site PJW08_04510 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase PJW08_04510 IPR001585 Transaldolase/Fructose-6-phosphate aldolase PJW08_04510 IPR022999 Transaldolase type 3B, putative PJW08_04510 IPR013785 Aldolase-type TIM barrel PJW08_04520 IPR014464 Conserved virulence factor B PJW08_04520 IPR039566 Conserved virulence factor B, S1 domain PJW08_04520 IPR040764 Conserved virulence factor B-like, winged helix domain PJW08_04520 IPR012340 Nucleic acid-binding, OB-fold PJW08_04520 IPR022967 RNA-binding domain, S1 PJW08_04520 IPR003029 S1 domain PJW08_04520 IPR036388 Winged helix-like DNA-binding domain superfamily PJW08_04530 IPR029045 ClpP/crotonase-like domain superfamily PJW08_04530 IPR001753 Enoyl-CoA hydratase/isomerase PJW08_04530 IPR014748 Enoyl-CoA hydratase, C-terminal PJW08_04530 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB PJW08_04540 IPR036425 MoaB/Mog-like domain superfamily PJW08_04540 IPR036653 CinA-like, C-terminal PJW08_04540 IPR008136 CinA, C-terminal PJW08_04540 IPR041424 CinA, KH domain PJW08_04540 IPR008135 Competence-induced protein CinA PJW08_04540 IPR001453 MoaB/Mog domain PJW08_04545 IPR034704 L28p-like PJW08_04545 IPR037147 Ribosomal protein L28/L24 superfamily PJW08_04545 IPR001383 Ribosomal protein L28 PJW08_04545 IPR026569 Ribosomal protein L28/L24 PJW08_04550 IPR038584 Ribosomal protein L33 superfamily PJW08_04550 IPR001705 Ribosomal protein L33 PJW08_04550 IPR011332 Zinc-binding ribosomal protein PJW08_04560 IPR013822 Signal recognition particle SRP54, helical bundle PJW08_04560 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily PJW08_04560 IPR004390 Signal-recognition particle receptor FtsY PJW08_04560 IPR036225 SRP/SRP receptor, N-terminal PJW08_04560 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain PJW08_04560 IPR003593 AAA+ ATPase domain PJW08_04560 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_04575 IPR013848 Methylthiotransferase, N-terminal PJW08_04575 IPR006638 Elp3/MiaB/NifB PJW08_04575 IPR005839 Methylthiotransferase PJW08_04575 IPR020612 Methylthiotransferase, conserved site PJW08_04575 IPR038135 Methylthiotransferase, N-terminal domain superfamily PJW08_04575 IPR005840 Ribosomal protein S12 methylthiotransferase RimO PJW08_04575 IPR041582 RimO, TRAM domain PJW08_04575 IPR007197 Radical SAM PJW08_04575 IPR023404 Radical SAM, alpha/beta horseshoe PJW08_04575 IPR002792 TRAM domain PJW08_04645 IPR028923 SAICAR synthetase/ADE2, N-terminal PJW08_04645 IPR018236 SAICAR synthetase, conserved site PJW08_04665 IPR004839 Aminotransferase, class I/classII PJW08_04665 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type PJW08_04665 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type PJW08_04665 IPR015424 Pyridoxal phosphate-dependent transferase PJW08_04665 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW08_04665 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW08_04665 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site PJW08_04765 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 PJW08_04765 IPR015797 NUDIX hydrolase-like domain superfamily PJW08_04765 IPR000086 NUDIX hydrolase domain PJW08_04775 IPR014710 RmlC-like jelly roll fold PJW08_04775 IPR011051 RmlC-like cupin domain superfamily PJW08_04775 IPR001250 Mannose-6-phosphate isomerase, type I PJW08_04775 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form PJW08_04785 IPR003329 Acylneuraminate cytidylyltransferase PJW08_04785 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase PJW08_04785 IPR029044 Nucleotide-diphospho-sugar transferases PJW08_04795 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily PJW08_04795 IPR018372 Chloramphenicol acetyltransferase, active site PJW08_04795 IPR001707 Chloramphenicol acetyltransferase PJW08_04830 IPR001279 Metallo-beta-lactamase PJW08_04830 IPR000544 Octanoyltransferase PJW08_04830 IPR020605 Octanoyltransferase, conserved site PJW08_04830 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PJW08_04830 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain PJW08_04845 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form PJW08_04845 IPR005130 Serine dehydratase-like, alpha subunit PJW08_04845 IPR005131 Serine dehydratase beta chain PJW08_04845 IPR029009 Allosteric substrate binding domain superfamily PJW08_04870 IPR022953 ATP-dependent 6-phosphofructokinase PJW08_04870 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type PJW08_04870 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic PJW08_04870 IPR000023 Phosphofructokinase domain PJW08_04870 IPR015912 Phosphofructokinase, conserved site PJW08_04870 IPR035966 Phosphofructokinase superfamily PJW08_04875 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site PJW08_04875 IPR036291 NAD(P)-binding domain superfamily PJW08_04875 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family PJW08_04875 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain PJW08_04875 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain PJW08_04875 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I PJW08_04880 IPR006056 RidA family PJW08_04880 IPR019897 RidA, conserved site PJW08_04880 IPR035959 RutC-like superfamily PJW08_04880 IPR006175 YjgF/YER057c/UK114 family PJW08_04890 IPR005653 Organic solvent tolerance-like, N-terminal PJW08_04890 IPR007543 LptD, C-terminal PJW08_04890 IPR020889 LPS-assembly protein LptD PJW08_04900 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain PJW08_04910 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PJW08_04910 IPR004017 Cysteine-rich domain PJW08_04910 IPR009051 Alpha-helical ferredoxin PJW08_04910 IPR036197 NarG-like superfamily PJW08_04910 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PJW08_04915 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PJW08_04915 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PJW08_04915 IPR004017 Cysteine-rich domain PJW08_04915 IPR009051 Alpha-helical ferredoxin PJW08_04915 IPR036197 NarG-like superfamily PJW08_04925 IPR000537 UbiA prenyltransferase family PJW08_04925 IPR026046 UbiA prenyltransferase domain containing protein 1 PJW08_04925 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase PJW08_04940 IPR034603 Dipeptide epimerase PJW08_04940 IPR036849 Enolase-like, C-terminal domain superfamily PJW08_04940 IPR029017 Enolase-like, N-terminal PJW08_04940 IPR029065 Enolase C-terminal domain-like PJW08_04940 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site PJW08_04940 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PJW08_04940 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain PJW08_04945 IPR003675 CAAX prenyl protease 2 PJW08_04960 IPR035987 Ribosomal protein S8 superfamily PJW08_04960 IPR000630 Ribosomal protein S8 PJW08_04975 IPR000851 Ribosomal protein S5 PJW08_04975 IPR005712 Ribosomal protein S5, bacterial-type PJW08_04975 IPR005324 Ribosomal protein S5, C-terminal PJW08_04975 IPR020568 Ribosomal protein S5 domain 2-type fold PJW08_04975 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PJW08_04975 IPR013810 Ribosomal protein S5, N-terminal PJW08_04975 IPR018192 Ribosomal protein S5, N-terminal, conserved site PJW08_04980 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain PJW08_04980 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily PJW08_04980 IPR005996 Ribosomal protein L30, bacterial-type PJW08_04980 IPR018038 Ribosomal protein L30, conserved site PJW08_04985 IPR021131 Ribosomal protein L18e/L15P PJW08_04985 IPR030878 Ribosomal protein L15 PJW08_04985 IPR001196 Ribosomal protein L15, conserved site PJW08_04985 IPR036227 Ribosomal L18e/L15P superfamily PJW08_04985 IPR005749 Ribosomal protein L15, bacterial-type PJW08_04995 IPR012340 Nucleic acid-binding, OB-fold PJW08_04995 IPR006196 RNA-binding domain, S1, IF1 type PJW08_04995 IPR004368 Translation initiation factor IF-1 PJW08_05000 IPR000473 Ribosomal protein L36 PJW08_05000 IPR035977 Ribosomal protein L36 superfamily PJW08_05005 IPR019980 Ribosomal protein S13, bacterial-type PJW08_05005 IPR027437 30s ribosomal protein S13, C-terminal PJW08_05005 IPR001892 Ribosomal protein S13 PJW08_05005 IPR010979 Ribosomal protein S13-like, H2TH PJW08_05005 IPR018269 Ribosomal protein S13, conserved site PJW08_05025 IPR036373 Ribosomal protein L17 superfamily PJW08_05025 IPR000456 Ribosomal protein L17 PJW08_05035 IPR000531 TonB-dependent receptor-like, beta-barrel PJW08_05035 IPR012910 TonB-dependent receptor, plug domain PJW08_05035 IPR023996 TonB-dependent outer membrane protein, SusC/RagA PJW08_05035 IPR037066 TonB-dependent receptor, plug domain superfamily PJW08_05035 IPR008969 Carboxypeptidase-like, regulatory domain superfamily PJW08_05035 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site PJW08_05075 IPR011765 Peptidase M16, N-terminal PJW08_05075 IPR007863 Peptidase M16, C-terminal PJW08_05075 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like PJW08_05075 IPR001431 Peptidase M16, zinc-binding site PJW08_05090 IPR014033 Arginase PJW08_05090 IPR006035 Ureohydrolase PJW08_05090 IPR023696 Ureohydrolase domain superfamily PJW08_05090 IPR020855 Ureohydrolase, manganese-binding site PJW08_05095 IPR012675 Beta-grasp domain superfamily PJW08_05095 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PJW08_05095 IPR010035 ThiS, thiamine-biosynthesis PJW08_05095 IPR003749 Sulfur carrier ThiS/MoaD-like PJW08_05105 IPR022998 Thiamine phosphate synthase/TenI PJW08_05105 IPR034291 Thiamine phosphate synthase PJW08_05105 IPR013785 Aldolase-type TIM barrel PJW08_05105 IPR036206 Thiamin phosphate synthase superfamily PJW08_05110 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase PJW08_05110 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase PJW08_05110 IPR029056 Ribokinase-like PJW08_05115 IPR013785 Aldolase-type TIM barrel PJW08_05115 IPR036206 Thiamin phosphate synthase superfamily PJW08_05115 IPR022998 Thiamine phosphate synthase/TenI PJW08_05115 IPR034291 Thiamine phosphate synthase PJW08_05145 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA PJW08_05145 IPR000477 Reverse transcriptase domain PJW08_05150 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW08_05150 IPR036291 NAD(P)-binding domain superfamily PJW08_05150 IPR002347 Short-chain dehydrogenase/reductase SDR PJW08_05170 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_05170 IPR017871 ABC transporter, conserved site PJW08_05170 IPR003439 ABC transporter-like PJW08_05170 IPR003593 AAA+ ATPase domain PJW08_05180 IPR029001 Inosine triphosphate pyrophosphatase-like PJW08_05180 IPR002637 Ham1-like protein PJW08_05180 IPR020922 dITP/XTP pyrophosphatase PJW08_05190 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PJW08_05190 IPR029028 Alpha/beta knot methyltransferases PJW08_05190 IPR003742 RNA methyltransferase RlmH PJW08_05205 IPR017039 Virulence factor BrkB PJW08_05220 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW08_05220 IPR000531 TonB-dependent receptor-like, beta-barrel PJW08_05220 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site PJW08_05220 IPR037066 TonB-dependent receptor, plug domain superfamily PJW08_05220 IPR012910 TonB-dependent receptor, plug domain PJW08_05220 IPR008969 Carboxypeptidase-like, regulatory domain superfamily PJW08_05220 IPR023996 TonB-dependent outer membrane protein, SusC/RagA PJW08_05225 IPR008969 Carboxypeptidase-like, regulatory domain superfamily PJW08_05225 IPR012910 TonB-dependent receptor, plug domain PJW08_05225 IPR037066 TonB-dependent receptor, plug domain superfamily PJW08_05225 IPR023996 TonB-dependent outer membrane protein, SusC/RagA PJW08_05225 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site PJW08_05225 IPR000531 TonB-dependent receptor-like, beta-barrel PJW08_05250 IPR039420 Transcriptional regulatory protein WalR-like PJW08_05250 IPR011006 CheY-like superfamily PJW08_05250 IPR001867 OmpR/PhoB-type DNA-binding domain PJW08_05250 IPR016032 Signal transduction response regulator, C-terminal effector PJW08_05250 IPR001789 Signal transduction response regulator, receiver domain PJW08_05250 IPR036388 Winged helix-like DNA-binding domain superfamily PJW08_05255 IPR003594 Histidine kinase/HSP90-like ATPase PJW08_05255 IPR005467 Histidine kinase domain PJW08_05255 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW08_05255 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW08_05255 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW08_05255 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW08_05265 IPR001977 Dephospho-CoA kinase PJW08_05265 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_05305 IPR039421 Type I protein exporter PJW08_05305 IPR017871 ABC transporter, conserved site PJW08_05305 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_05305 IPR036640 ABC transporter type 1, transmembrane domain superfamily PJW08_05305 IPR011527 ABC transporter type 1, transmembrane domain PJW08_05305 IPR003593 AAA+ ATPase domain PJW08_05305 IPR003439 ABC transporter-like PJW08_05315 IPR015890 Chorismate-utilising enzyme, C-terminal PJW08_05315 IPR004561 Isochorismate synthase PJW08_05315 IPR034681 Isochorismate synthase MenF PJW08_05315 IPR005801 ADC synthase PJW08_05320 IPR029069 HotDog domain superfamily PJW08_05320 IPR003736 Phenylacetic acid degradation-related domain PJW08_05320 IPR006683 Thioesterase domain PJW08_05330 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily PJW08_05330 IPR006070 YrdC-like domain PJW08_05350 IPR003439 ABC transporter-like PJW08_05350 IPR032781 ABC-transporter extension domain PJW08_05350 IPR032524 ABC transporter Uup, C-terminal PJW08_05350 IPR003593 AAA+ ATPase domain PJW08_05350 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily PJW08_05350 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_05350 IPR017871 ABC transporter, conserved site PJW08_05380 IPR036291 NAD(P)-binding domain superfamily PJW08_05380 IPR011342 Shikimate dehydrogenase PJW08_05380 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal PJW08_05380 IPR022893 Shikimate dehydrogenase family PJW08_05420 IPR004087 K Homology domain PJW08_05420 IPR003607 HD/PDEase domain PJW08_05420 IPR006674 HD domain PJW08_05420 IPR006675 HDIG domain PJW08_05420 IPR004088 K Homology domain, type 1 PJW08_05420 IPR036612 K Homology domain, type 1 superfamily PJW08_05420 IPR017705 Ribonuclease Y PJW08_05420 IPR022711 Ribonuclease Y, N-terminal PJW08_05485 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal PJW08_05485 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria PJW08_05485 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PJW08_05485 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain PJW08_05485 IPR029028 Alpha/beta knot methyltransferases PJW08_05500 IPR002933 Peptidase M20 PJW08_05500 IPR011650 Peptidase M20, dimerisation domain PJW08_05500 IPR001160 Peptidase M20C, Xaa-His dipeptidase PJW08_05505 IPR000093 DNA recombination protein RecR PJW08_05505 IPR023627 Recombination protein RecR PJW08_05505 IPR023628 Recombination protein RecR, C4-type zinc finger PJW08_05505 IPR015967 Recombination protein RecR, conserved site PJW08_05505 IPR006171 TOPRIM domain PJW08_05505 IPR034137 RecR, TOPRIM domain PJW08_05515 IPR005265 Protoporphyrinogen oxidase HemJ-like PJW08_05530 IPR033644 Ferrochelatase, C-terminal PJW08_05530 IPR033659 Ferrochelatase, N-terminal PJW08_05530 IPR001015 Ferrochelatase PJW08_05540 IPR009057 Homeobox-like domain superfamily PJW08_05540 IPR018060 DNA binding HTH domain, AraC-type PJW08_05540 IPR018062 HTH domain AraC-type, conserved site PJW08_05545 IPR018214 Glutamyl-tRNA reductase, conserved site PJW08_05545 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily PJW08_05545 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase PJW08_05545 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain PJW08_05545 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily PJW08_05545 IPR036291 NAD(P)-binding domain superfamily PJW08_05545 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase PJW08_05545 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal PJW08_05560 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase PJW08_05560 IPR015424 Pyridoxal phosphate-dependent transferase PJW08_05560 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW08_05560 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW08_05560 IPR005814 Aminotransferase class-III PJW08_05590 IPR001509 NAD-dependent epimerase/dehydratase PJW08_05590 IPR013549 Domain of unknown function DUF1731 PJW08_05590 IPR010099 Epimerase family protein SDR39U1 PJW08_05590 IPR036291 NAD(P)-binding domain superfamily PJW08_05605 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding PJW08_05605 IPR002547 tRNA-binding domain PJW08_05605 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW08_05605 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal PJW08_05605 IPR012340 Nucleic acid-binding, OB-fold PJW08_05605 IPR029038 Methionyl-tRNA synthetase, Zn-domain PJW08_05605 IPR033911 Methioninyl-tRNA synthetase core domain PJW08_05605 IPR015413 Methionyl/Leucyl tRNA synthetase PJW08_05605 IPR014758 Methionyl-tRNA synthetase PJW08_05605 IPR023458 Methionine-tRNA ligase, type 1 PJW08_05605 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PJW08_05605 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain PJW08_05620 IPR002696 Putative membrane protein insertion efficiency factor PJW08_05625 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt PJW08_05630 IPR029058 Alpha/Beta hydrolase fold PJW08_05630 IPR000073 Alpha/beta hydrolase fold-1 PJW08_05630 IPR005944 Proline iminopeptidase PJW08_05630 IPR002410 Peptidase S33 PJW08_05635 IPR016192 APOBEC/CMP deaminase, zinc-binding PJW08_05635 IPR002125 Cytidine and deoxycytidylate deaminase domain PJW08_05635 IPR016193 Cytidine deaminase-like PJW08_05660 IPR010917 TonB-dependent receptor, conserved site PJW08_05660 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW08_05660 IPR010105 TonB-dependent siderophore receptor PJW08_05660 IPR037066 TonB-dependent receptor, plug domain superfamily PJW08_05660 IPR012910 TonB-dependent receptor, plug domain PJW08_05660 IPR039426 Vitamin B12 transporter BtuB-like PJW08_05660 IPR000531 TonB-dependent receptor-like, beta-barrel PJW08_05680 IPR000271 Ribosomal protein L34 PJW08_05680 IPR020939 Ribosomal protein L34, conserved site PJW08_05710 IPR029028 Alpha/beta knot methyltransferases PJW08_05710 IPR001537 tRNA/rRNA methyltransferase, SpoU type PJW08_05710 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase PJW08_05710 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PJW08_05720 IPR018668 DNA-binding protein VF530-like PJW08_05720 IPR036361 SAP domain superfamily PJW08_05745 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type PJW08_05745 IPR029052 Metallo-dependent phosphatase-like PJW08_05775 IPR042097 Aminopeptidase N-like , N-terminal PJW08_05775 IPR034016 Aminopeptidase N-type PJW08_05775 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase PJW08_05775 IPR014782 Peptidase M1, membrane alanine aminopeptidase PJW08_05775 IPR024571 ERAP1-like C-terminal domain PJW08_05790 IPR002491 ABC transporter periplasmic binding domain PJW08_05790 IPR023544 ABC transporter, vitamin B12-binding protein PJW08_05800 IPR003805 Adenosylcobinamide-GDP ribazoletransferase PJW08_05810 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase PJW08_05810 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_05815 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW08_05815 IPR010916 TonB box, conserved site PJW08_05815 IPR000531 TonB-dependent receptor-like, beta-barrel PJW08_05815 IPR010101 TonB-dependent vitamin B12 transporter BtuB PJW08_05815 IPR012910 TonB-dependent receptor, plug domain PJW08_05815 IPR039426 Vitamin B12 transporter BtuB-like PJW08_05815 IPR037066 TonB-dependent receptor, plug domain superfamily PJW08_05830 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_05830 IPR017871 ABC transporter, conserved site PJW08_05830 IPR003439 ABC transporter-like PJW08_05830 IPR003593 AAA+ ATPase domain PJW08_05840 IPR003593 AAA+ ATPase domain PJW08_05840 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_05840 IPR025857 MacB-like periplasmic core domain PJW08_05840 IPR017911 ABC transporter, macrolide export, ATP-binding domain PJW08_05840 IPR003439 ABC transporter-like PJW08_05840 IPR017871 ABC transporter, conserved site PJW08_05840 IPR003838 ABC transporter permease protein domain PJW08_05850 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal PJW08_05850 IPR006222 Aminomethyltransferase, folate-binding domain PJW08_05850 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 PJW08_05850 IPR028896 Aminomethyltransferase-like PJW08_05850 IPR022903 Glycine cleavage system T protein, bacteria PJW08_05850 IPR006223 Glycine cleavage system T protein PJW08_05850 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain PJW08_05855 IPR018668 DNA-binding protein VF530-like PJW08_05855 IPR036361 SAP domain superfamily PJW08_05865 IPR036291 NAD(P)-binding domain superfamily PJW08_05865 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW08_05865 IPR002347 Short-chain dehydrogenase/reductase SDR PJW08_05870 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core PJW08_05870 IPR011551 NTP pyrophosphohydrolase MazG PJW08_05880 IPR023635 Peptide deformylase PJW08_05880 IPR036821 Peptide deformylase superfamily PJW08_05885 IPR005227 Putative pre-16S rRNA nuclease PJW08_05885 IPR006641 YqgF/RNase H-like domain PJW08_05885 IPR037027 YqgF/RNase H-like domain superfamily PJW08_05885 IPR012337 Ribonuclease H-like superfamily PJW08_05890 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily PJW08_05890 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family PJW08_05890 IPR001451 Hexapeptide repeat PJW08_05890 IPR018357 Hexapeptide transferase, conserved site PJW08_05890 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 PJW08_05890 IPR011004 Trimeric LpxA-like superfamily PJW08_05920 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily PJW08_05920 IPR023535 Threonylcarbamoyl-AMP synthase PJW08_05920 IPR006070 YrdC-like domain PJW08_05940 IPR003593 AAA+ ATPase domain PJW08_05940 IPR036640 ABC transporter type 1, transmembrane domain superfamily PJW08_05940 IPR003439 ABC transporter-like PJW08_05940 IPR017871 ABC transporter, conserved site PJW08_05940 IPR011917 ABC transporter, lipid A export, MsbA PJW08_05940 IPR011527 ABC transporter type 1, transmembrane domain PJW08_05940 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_05940 IPR039421 Type I protein exporter PJW08_05950 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase PJW08_05950 IPR001173 Glycosyltransferase 2-like PJW08_05950 IPR029044 Nucleotide-diphospho-sugar transferases PJW08_05975 IPR001874 Dehydroquinase, class II PJW08_05975 IPR018509 Dehydroquinase, class II, conserved site PJW08_05975 IPR036441 Dehydroquinase, class II superfamily PJW08_05990 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase PJW08_05990 IPR000462 CDP-alcohol phosphatidyltransferase PJW08_05995 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_05995 IPR003593 AAA+ ATPase domain PJW08_05995 IPR003439 ABC transporter-like PJW08_05995 IPR017871 ABC transporter, conserved site PJW08_05995 IPR030921 LPS export ABC transporter, ATP-binding protein LptB PJW08_06005 IPR002033 Sec-independent periplasmic protein translocase TatC PJW08_06010 IPR000644 CBS domain PJW08_06010 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type PJW08_06010 IPR001347 Sugar isomerase (SIS) PJW08_06010 IPR035474 KpsF-like, SIS domain PJW08_06030 IPR008141 Alanine dehydrogenase PJW08_06030 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 PJW08_06030 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 PJW08_06030 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain PJW08_06030 IPR036291 NAD(P)-binding domain superfamily PJW08_06030 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal PJW08_06050 IPR001451 Hexapeptide repeat PJW08_06050 IPR018357 Hexapeptide transferase, conserved site PJW08_06050 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD PJW08_06050 IPR011004 Trimeric LpxA-like superfamily PJW08_06050 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region PJW08_06055 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal PJW08_06055 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal PJW08_06055 IPR020568 Ribosomal protein S5 domain 2-type fold PJW08_06055 IPR029069 HotDog domain superfamily PJW08_06055 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ PJW08_06055 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase PJW08_06055 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ PJW08_06060 IPR011004 Trimeric LpxA-like superfamily PJW08_06060 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase PJW08_06060 IPR001451 Hexapeptide repeat PJW08_06060 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily PJW08_06060 IPR018357 Hexapeptide transferase, conserved site PJW08_06060 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal PJW08_06075 IPR016102 Succinyl-CoA synthetase-like PJW08_06075 IPR036291 NAD(P)-binding domain superfamily PJW08_06075 IPR005811 ATP-citrate lyase/succinyl-CoA ligase PJW08_06075 IPR003781 CoA-binding PJW08_06075 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site PJW08_06075 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site PJW08_06075 IPR005810 Succinyl-CoA ligase, alpha subunit PJW08_06085 IPR003672 CobN/magnesium chelatase PJW08_06085 IPR011953 Cobaltochelatase, CobN subunit PJW08_06090 IPR011953 Cobaltochelatase, CobN subunit PJW08_06090 IPR003672 CobN/magnesium chelatase PJW08_06100 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW PJW08_06100 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PJW08_06100 IPR003495 CobW/HypB/UreG, nucleotide-binding domain PJW08_06100 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_06100 IPR036627 CobW-like, C-terminal domain superfamily PJW08_06105 IPR016030 Cobalamin adenosyltransferase-like PJW08_06105 IPR036451 Cobalamin adenosyltransferase-like superfamily PJW08_06105 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type PJW08_06110 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA PJW08_06110 IPR029062 Class I glutamine amidotransferase-like PJW08_06110 IPR017929 CobB/CobQ glutamine amidotransferase PJW08_06110 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain PJW08_06110 IPR011698 CobB/CobQ-like glutamine amidotransferase PJW08_06110 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_06115 IPR011775 Magnesium chelatase, ATPase subunit I PJW08_06115 IPR003593 AAA+ ATPase domain PJW08_06115 IPR000523 Magnesium chelatase ChlI domain PJW08_06115 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_06115 IPR041628 ChlI/MoxR, AAA lid domain PJW08_06120 IPR003593 AAA+ ATPase domain PJW08_06120 IPR041628 ChlI/MoxR, AAA lid domain PJW08_06120 IPR011775 Magnesium chelatase, ATPase subunit I PJW08_06120 IPR000523 Magnesium chelatase ChlI domain PJW08_06120 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_06125 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_06125 IPR000523 Magnesium chelatase ChlI domain PJW08_06125 IPR003593 AAA+ ATPase domain PJW08_06125 IPR041628 ChlI/MoxR, AAA lid domain PJW08_06125 IPR011775 Magnesium chelatase, ATPase subunit I PJW08_06135 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD PJW08_06135 IPR036074 CbiD superfamily PJW08_06140 IPR003723 Precorrin-6x reductase PJW08_06145 IPR000878 Tetrapyrrole methylase PJW08_06145 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site PJW08_06145 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase PJW08_06145 IPR014776 Tetrapyrrole methylase, subdomain 2 PJW08_06145 IPR014777 Tetrapyrrole methylase, subdomain 1 PJW08_06145 IPR035996 Tetrapyrrole methylase superfamily PJW08_06150 IPR021744 Cobalamin synthesis G, N-terminal PJW08_06150 IPR038029 GbiG N-terminal domain superfamily PJW08_06150 IPR036518 CobE/GbiG C-terminal domain superfamily PJW08_06150 IPR002750 CobE/GbiG C-terminal domain PJW08_06150 IPR021745 Cobalamin biosynthesis central region PJW08_06155 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit PJW08_06155 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase PJW08_06155 IPR000878 Tetrapyrrole methylase PJW08_06155 IPR035996 Tetrapyrrole methylase superfamily PJW08_06155 IPR014777 Tetrapyrrole methylase, subdomain 1 PJW08_06155 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW08_06155 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase PJW08_06160 IPR029479 Nitroreductase PJW08_06160 IPR000415 Nitroreductase-like PJW08_06160 IPR012825 5,6-dimethylbenzimidazole synthase BluB PJW08_06165 IPR000878 Tetrapyrrole methylase PJW08_06165 IPR035996 Tetrapyrrole methylase superfamily PJW08_06165 IPR014777 Tetrapyrrole methylase, subdomain 1 PJW08_06165 IPR014776 Tetrapyrrole methylase, subdomain 2 PJW08_06165 IPR006363 Precorrin-3B C17-methyltransferase domain PJW08_06170 IPR014776 Tetrapyrrole methylase, subdomain 2 PJW08_06170 IPR006363 Precorrin-3B C17-methyltransferase domain PJW08_06170 IPR000878 Tetrapyrrole methylase PJW08_06170 IPR014777 Tetrapyrrole methylase, subdomain 1 PJW08_06170 IPR035996 Tetrapyrrole methylase superfamily PJW08_06175 IPR000878 Tetrapyrrole methylase PJW08_06175 IPR035996 Tetrapyrrole methylase superfamily PJW08_06175 IPR014777 Tetrapyrrole methylase, subdomain 1 PJW08_06175 IPR014776 Tetrapyrrole methylase, subdomain 2 PJW08_06175 IPR012382 Precorrin-2 C(20)-methyltransferase PJW08_06175 IPR006364 Precorrin-2 C(20)-methyltransferase domain PJW08_06175 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site PJW08_06185 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX PJW08_06190 IPR006366 Uroporphyrin-III C-methyltransferase PJW08_06190 IPR035996 Tetrapyrrole methylase superfamily PJW08_06190 IPR000878 Tetrapyrrole methylase PJW08_06190 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site PJW08_06190 IPR006367 Sirohaem synthase, N-terminal PJW08_06190 IPR019478 Sirohaem synthase, dimerisation domain PJW08_06190 IPR014776 Tetrapyrrole methylase, subdomain 2 PJW08_06190 IPR012409 Sirohaem synthase PJW08_06190 IPR037115 Sirohaem synthase, dimerisation domain superfamily PJW08_06190 IPR014777 Tetrapyrrole methylase, subdomain 1 PJW08_06190 IPR036291 NAD(P)-binding domain superfamily PJW08_06190 IPR028281 Siroheme synthase, central domain PJW08_06230 IPR004485 Cobalamin biosynthesis CobD/CbiB PJW08_06235 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW08_06235 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW08_06235 IPR005861 Histidinol-phosphate aminotransferase family PJW08_06235 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site PJW08_06235 IPR015424 Pyridoxal phosphate-dependent transferase PJW08_06235 IPR004839 Aminotransferase, class I/classII PJW08_06240 IPR011698 CobB/CobQ-like glutamine amidotransferase PJW08_06240 IPR029062 Class I glutamine amidotransferase-like PJW08_06240 IPR017929 CobB/CobQ glutamine amidotransferase PJW08_06240 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 PJW08_06240 IPR004459 Cobyric acid synthase CobQ PJW08_06240 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_06255 IPR035647 EF-G domain III/V-like PJW08_06255 IPR041095 Elongation Factor G, domain II PJW08_06255 IPR009000 Translation protein, beta-barrel domain superfamily PJW08_06255 IPR000795 Transcription factor, GTP-binding domain PJW08_06255 IPR035650 Tetracycline resistance protein, C-terminal PJW08_06255 IPR005225 Small GTP-binding protein domain PJW08_06255 IPR005517 Translation elongation factor EFG/EF2, domain IV PJW08_06255 IPR020568 Ribosomal protein S5 domain 2-type fold PJW08_06255 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_06255 IPR031157 Tr-type G domain, conserved site PJW08_06255 IPR000640 Elongation factor EFG, domain V-like PJW08_06255 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PJW08_06265 IPR018490 Cyclic nucleotide-binding-like PJW08_06265 IPR000595 Cyclic nucleotide-binding domain PJW08_06265 IPR012318 Crp-type HTH domain PJW08_06265 IPR014710 RmlC-like jelly roll fold PJW08_06265 IPR036388 Winged helix-like DNA-binding domain superfamily PJW08_06265 IPR036390 Winged helix DNA-binding domain superfamily PJW08_06275 IPR018752 Uncharacterised protein family UPF0753 PJW08_06285 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 PJW08_06285 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup PJW08_06285 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal PJW08_06285 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit PJW08_06290 IPR002645 STAS domain PJW08_06290 IPR011547 SLC26A/SulP transporter domain PJW08_06290 IPR001902 SLC26A/SulP transporter PJW08_06290 IPR036513 STAS domain superfamily PJW08_06300 IPR000055 Restriction endonuclease, type I, HsdS PJW08_06375 IPR013785 Aldolase-type TIM barrel PJW08_06375 IPR001989 Radical-activating enzyme, conserved site PJW08_06375 IPR007197 Radical SAM PJW08_06375 IPR012838 Pyruvate formate-lyase 1 activating enzyme PJW08_06375 IPR012839 Organic radical enzyme activase PJW08_06375 IPR034457 Organic radical-activating enzymes PJW08_06375 IPR034465 Pyruvate formate-lyase activase PJW08_06400 IPR041679 DNA2/NAM7 helicase-like, AAA domain PJW08_06400 IPR025103 Protein of unknown function DUF4011 PJW08_06400 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_06400 IPR041677 DNA2/NAM7 helicase, AAA domain PJW08_06425 IPR005936 Peptidase, FtsH PJW08_06425 IPR003593 AAA+ ATPase domain PJW08_06425 IPR041569 AAA ATPase, AAA+ lid domain PJW08_06425 IPR003959 ATPase, AAA-type, core PJW08_06425 IPR003960 ATPase, AAA-type, conserved site PJW08_06425 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_06425 IPR037219 Peptidase M41-like PJW08_06425 IPR000642 Peptidase M41 PJW08_06440 IPR003593 AAA+ ATPase domain PJW08_06440 IPR011704 ATPase, dynein-related, AAA domain PJW08_06440 IPR021961 Protein of unknown function DUF3578 PJW08_06440 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_06455 IPR000055 Restriction endonuclease, type I, HsdS PJW08_06460 IPR000055 Restriction endonuclease, type I, HsdS PJW08_06470 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PJW08_06470 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW08_06470 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily PJW08_06470 IPR003356 DNA methylase, adenine-specific PJW08_06475 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily PJW08_06475 IPR003356 DNA methylase, adenine-specific PJW08_06475 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PJW08_06475 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW08_06490 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal PJW08_06490 IPR013670 EcoEI R protein C-terminal domain PJW08_06490 IPR006935 Helicase/UvrB, N-terminal PJW08_06490 IPR014001 Helicase superfamily 1/2, ATP-binding domain PJW08_06490 IPR001650 Helicase, C-terminal PJW08_06490 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_06565 IPR001668 Plasmid recombination enzyme PJW08_06610 IPR031168 TrmE-type guanine nucleotide-binding domain PJW08_06610 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 PJW08_06610 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_06610 IPR025867 MnmE, helical domain PJW08_06610 IPR027368 tRNA modification GTPase MnmE domain 2 PJW08_06610 IPR005225 Small GTP-binding protein domain PJW08_06610 IPR006073 GTP binding domain PJW08_06610 IPR004520 tRNA modification GTPase MnmE PJW08_06610 IPR018948 GTP-binding protein TrmE, N-terminal PJW08_06675 IPR006664 Outer membrane protein, bacterial PJW08_06675 IPR006665 OmpA-like domain PJW08_06675 IPR036737 OmpA-like domain superfamily PJW08_06675 IPR001280 Photosystem I PsaA/PsaB PJW08_06675 IPR020586 Photosystem I PsaA/PsaB, conserved site PJW08_06675 IPR036408 Photosystem I PsaA/PsaB superfamily PJW08_06675 IPR006244 Photosystem I PsaB PJW08_06700 IPR041246 Bacterial alpha-2-macroglobulin MG10 domain PJW08_06700 IPR041462 Bacterial Alpha-2-macroglobulin, MG6 domain PJW08_06700 IPR041203 Bacterial Alpha-2-macroglobulin, MG5 domain PJW08_06700 IPR011625 Alpha-2-macroglobulin, bait region domain PJW08_06700 IPR011626 Alpha-macroglobulin-like, TED domain PJW08_06700 IPR040639 Alpha-2-macroglobulin, MG1 domain PJW08_06700 IPR001599 Alpha-2-macroglobulin PJW08_06700 IPR021868 Alpha-2-macroglobulin MG3 domain PJW08_06700 IPR026284 Alpha-2-macroglobulin, bacteria PJW08_06700 IPR002890 Macroglobulin domain PJW08_06700 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid PJW08_06735 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme PJW08_06735 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW08_06735 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase PJW08_06735 IPR015424 Pyridoxal phosphate-dependent transferase PJW08_06735 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW08_06750 IPR030489 Transcription regulator Rrf2-type, conserved site PJW08_06750 IPR000944 Transcription regulator Rrf2-type PJW08_06750 IPR036388 Winged helix-like DNA-binding domain superfamily PJW08_06750 IPR036390 Winged helix DNA-binding domain superfamily PJW08_06760 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase PJW08_06760 IPR002500 Phosphoadenosine phosphosulphate reductase PJW08_06760 IPR011800 Phosphoadenosine phosphosulphate reductase CysH PJW08_06760 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW08_06770 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_06770 IPR002891 Adenylyl-sulfate kinase PJW08_06770 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain PJW08_06770 IPR031157 Tr-type G domain, conserved site PJW08_06770 IPR000795 Transcription factor, GTP-binding domain PJW08_06770 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PJW08_06770 IPR009000 Translation protein, beta-barrel domain superfamily PJW08_06770 IPR011779 Sulphate adenylyltransferase, large subunit PJW08_06780 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site PJW08_06780 IPR006367 Sirohaem synthase, N-terminal PJW08_06780 IPR019478 Sirohaem synthase, dimerisation domain PJW08_06780 IPR028281 Siroheme synthase, central domain PJW08_06780 IPR000878 Tetrapyrrole methylase PJW08_06780 IPR037115 Sirohaem synthase, dimerisation domain superfamily PJW08_06780 IPR036291 NAD(P)-binding domain superfamily PJW08_06780 IPR006366 Uroporphyrin-III C-methyltransferase PJW08_06780 IPR014776 Tetrapyrrole methylase, subdomain 2 PJW08_06780 IPR012409 Sirohaem synthase PJW08_06780 IPR035996 Tetrapyrrole methylase superfamily PJW08_06780 IPR014777 Tetrapyrrole methylase, subdomain 1 PJW08_06785 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site PJW08_06785 IPR006367 Sirohaem synthase, N-terminal PJW08_06785 IPR019478 Sirohaem synthase, dimerisation domain PJW08_06785 IPR028281 Siroheme synthase, central domain PJW08_06785 IPR012409 Sirohaem synthase PJW08_06785 IPR036291 NAD(P)-binding domain superfamily PJW08_06785 IPR006366 Uroporphyrin-III C-methyltransferase PJW08_06785 IPR014776 Tetrapyrrole methylase, subdomain 2 PJW08_06785 IPR014777 Tetrapyrrole methylase, subdomain 1 PJW08_06785 IPR035996 Tetrapyrrole methylase superfamily PJW08_06785 IPR000878 Tetrapyrrole methylase PJW08_06785 IPR037115 Sirohaem synthase, dimerisation domain superfamily PJW08_06790 IPR022890 Ferredoxin--NADP reductase, type 2 PJW08_06790 IPR023753 FAD/NAD(P)-binding domain PJW08_06790 IPR036188 FAD/NAD(P)-binding domain superfamily PJW08_06795 IPR042122 Serine acetyltransferase, N-terminal domain superfamily PJW08_06795 IPR011004 Trimeric LpxA-like superfamily PJW08_06795 IPR001451 Hexapeptide repeat PJW08_06800 IPR001926 Pyridoxal-phosphate dependent enzyme PJW08_06800 IPR005858 Cysteine synthase CysM PJW08_06800 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site PJW08_06800 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PJW08_06800 IPR005856 Cysteine synthase PJW08_06815 IPR029041 FAD-linked oxidoreductase-like PJW08_06815 IPR004621 Eukaryotic-type methylenetetrahydrofolate reductase PJW08_06815 IPR004620 5,10-methylenetetrahydrofolate reductase PJW08_06815 IPR003171 Methylenetetrahydrofolate reductase PJW08_06835 IPR004431 3-isopropylmalate dehydratase, small subunit PJW08_06835 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PJW08_06835 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain PJW08_06835 IPR033940 3-isopropylmalate dehydratase, swivel domain PJW08_06860 IPR012846 Acetolactate synthase, large subunit, biosynthetic PJW08_06860 IPR029035 DHS-like NAD/FAD-binding domain superfamily PJW08_06860 IPR029061 Thiamin diphosphate-binding fold PJW08_06860 IPR012000 Thiamine pyrophosphate enzyme, central domain PJW08_06860 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain PJW08_06860 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding PJW08_06860 IPR039368 Acetolactate synthase large subunit, TPP binding domain PJW08_06875 IPR011820 L-threonine dehydratase biosynthetic IlvA PJW08_06875 IPR001926 Pyridoxal-phosphate dependent enzyme PJW08_06875 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site PJW08_06875 IPR001721 Threonine dehydratase, ACT-like domain PJW08_06875 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PJW08_06885 IPR011820 L-threonine dehydratase biosynthetic IlvA PJW08_06885 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site PJW08_06885 IPR001721 Threonine dehydratase, ACT-like domain PJW08_06885 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PJW08_06885 IPR001926 Pyridoxal-phosphate dependent enzyme PJW08_06915 IPR002481 Ferric-uptake regulator PJW08_06915 IPR036390 Winged helix DNA-binding domain superfamily PJW08_06915 IPR036388 Winged helix-like DNA-binding domain superfamily PJW08_06920 IPR003607 HD/PDEase domain PJW08_06920 IPR004811 RelA/SpoT family PJW08_06920 IPR007685 RelA/SpoT PJW08_06920 IPR004095 TGS PJW08_06920 IPR012676 TGS-like PJW08_06920 IPR002912 ACT domain PJW08_06920 IPR012675 Beta-grasp domain superfamily PJW08_06920 IPR033655 RelA, TGS domain PJW08_06930 IPR000529 Ribosomal protein S6 PJW08_06930 IPR020814 Ribosomal protein S6, plastid/chloroplast PJW08_06930 IPR035980 Ribosomal protein S6 superfamily PJW08_06930 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 PJW08_06935 IPR001648 Ribosomal protein S18 PJW08_06935 IPR018275 Ribosomal protein S18, conserved site PJW08_06935 IPR036870 Ribosomal protein S18 superfamily PJW08_06945 IPR029066 PLP-binding barrel PJW08_06945 IPR002986 Diaminopimelate decarboxylase, LysA PJW08_06945 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal PJW08_06945 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal PJW08_06945 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site PJW08_06945 IPR000183 Ornithine/DAP/Arg decarboxylase PJW08_06945 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal PJW08_06950 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site PJW08_06950 IPR010161 Peptidase M20B, tripeptide aminopeptidase PJW08_06950 IPR002933 Peptidase M20 PJW08_06950 IPR036264 Bacterial exopeptidase dimerisation domain PJW08_06950 IPR011650 Peptidase M20, dimerisation domain PJW08_06970 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily PJW08_06970 IPR007692 DNA helicase, DnaB type PJW08_06970 IPR007694 DNA helicase, DnaB-like, C-terminal PJW08_06970 IPR007693 DNA helicase, DnaB-like, N-terminal PJW08_06970 IPR003586 Hint domain C-terminal PJW08_06970 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal PJW08_06970 IPR036844 Hint domain superfamily PJW08_06970 IPR006142 Intein PJW08_06970 IPR030934 Intein C-terminal splicing region PJW08_06970 IPR004042 Intein DOD homing endonuclease PJW08_06970 IPR006141 Intein N-terminal splicing region PJW08_06970 IPR004860 Homing endonuclease, LAGLIDADG PJW08_06970 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_06970 IPR003587 Hint domain N-terminal PJW08_06970 IPR027434 Homing endonuclease PJW08_06990 IPR001296 Glycosyl transferase, family 1 PJW08_06990 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PJW08_06990 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA PJW08_06995 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding PJW08_06995 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PJW08_06995 IPR013328 6-phosphogluconate dehydrogenase, domain 2 PJW08_06995 IPR036291 NAD(P)-binding domain superfamily PJW08_06995 IPR022694 3-hydroxyacyl-CoA dehydrogenase PJW08_06995 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site PJW08_06995 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal PJW08_07010 IPR000683 Oxidoreductase, N-terminal PJW08_07010 IPR036291 NAD(P)-binding domain superfamily PJW08_07010 IPR004104 Oxidoreductase, C-terminal PJW08_07015 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase PJW08_07015 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW08_07030 IPR035994 Nucleoside phosphorylase superfamily PJW08_07030 IPR018016 Nucleoside phosphorylase, conserved site PJW08_07030 IPR000845 Nucleoside phosphorylase domain PJW08_07030 IPR004402 Purine nucleoside phosphorylase DeoD-type PJW08_07050 IPR036909 Cytochrome c-like domain superfamily PJW08_07050 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase PJW08_07050 IPR009056 Cytochrome c-like domain PJW08_07050 IPR004852 Di-haem cytochrome c peroxidase PJW08_07095 IPR008910 Conserved TM helix PJW08_07105 IPR001736 Phospholipase D/Transphosphatidylase PJW08_07105 IPR041679 DNA2/NAM7 helicase-like, AAA domain PJW08_07105 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_07105 IPR025202 Phospholipase D-like domain PJW08_07125 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily PJW08_07125 IPR004401 Nucleoid-associated protein YbaB/EbfC family PJW08_07130 IPR029058 Alpha/Beta hydrolase fold PJW08_07130 IPR023302 Peptidase S9A, N-terminal domain PJW08_07130 IPR002470 Peptidase S9A, prolyl oligopeptidase PJW08_07130 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain PJW08_07165 IPR012338 Beta-lactamase/transpeptidase-like PJW08_07165 IPR001264 Glycosyl transferase, family 51 PJW08_07165 IPR023346 Lysozyme-like domain superfamily PJW08_07165 IPR036950 Penicillin binding protein transglycosylase domain PJW08_07165 IPR001460 Penicillin-binding protein, transpeptidase PJW08_07200 IPR034739 UvrD/AddA helicase, N-terminal PJW08_07200 IPR005751 ATP-dependent DNA helicase PcrA PJW08_07200 IPR013986 DExx box DNA helicase domain superfamily PJW08_07200 IPR014017 UvrD-like DNA helicase, C-terminal PJW08_07200 IPR000212 DNA helicase, UvrD/REP type PJW08_07200 IPR014016 UvrD-like helicase, ATP-binding domain PJW08_07200 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_07215 IPR000740 GrpE nucleotide exchange factor PJW08_07215 IPR009012 GrpE nucleotide exchange factor, head PJW08_07215 IPR013805 GrpE nucleotide exchange factor, coiled-coil PJW08_07220 IPR012724 Chaperone DnaJ PJW08_07220 IPR002939 Chaperone DnaJ, C-terminal PJW08_07220 IPR001623 DnaJ domain PJW08_07220 IPR018253 DnaJ domain, conserved site PJW08_07220 IPR008971 HSP40/DnaJ peptide-binding PJW08_07220 IPR001305 Heat shock protein DnaJ, cysteine-rich domain PJW08_07220 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily PJW08_07220 IPR036869 Chaperone J-domain superfamily PJW08_07240 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase PJW08_07240 IPR036291 NAD(P)-binding domain superfamily PJW08_07240 IPR002347 Short-chain dehydrogenase/reductase SDR PJW08_07265 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_07265 IPR031322 Shikimate kinase/gluconokinase PJW08_07265 IPR000623 Shikimate kinase/Threonine synthase-like 1 PJW08_07270 IPR029057 Phosphoribosyltransferase-like PJW08_07270 IPR023050 Bifunctional protein PyrR PJW08_07270 IPR000836 Phosphoribosyltransferase domain PJW08_07275 IPR025708 Heat shock protein 15 PJW08_07275 IPR002942 RNA-binding S4 domain PJW08_07275 IPR036986 RNA-binding S4 domain superfamily PJW08_07295 IPR033248 Transketolase, C-terminal domain PJW08_07295 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II PJW08_07295 IPR029061 Thiamin diphosphate-binding fold PJW08_07295 IPR005475 Transketolase-like, pyrimidine-binding domain PJW08_07300 IPR029001 Inosine triphosphate pyrophosphatase-like PJW08_07300 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein PJW08_07310 IPR023620 Small protein B PJW08_07310 IPR000037 SsrA-binding protein PJW08_07310 IPR020081 SsrA-binding protein, conserved site PJW08_07315 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel PJW08_07315 IPR005618 Outer membrane protein, OmpW PJW08_07320 IPR003959 ATPase, AAA-type, core PJW08_07320 IPR036628 Clp, N-terminal domain superfamily PJW08_07320 IPR004176 Clp, N-terminal PJW08_07320 IPR001270 ClpA/B family PJW08_07320 IPR018368 ClpA/B, conserved site 1 PJW08_07320 IPR028299 ClpA/B, conserved site 2 PJW08_07320 IPR041546 ClpA/ClpB, AAA lid domain PJW08_07320 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_07320 IPR003593 AAA+ ATPase domain PJW08_07320 IPR017730 Chaperonin ClpB PJW08_07320 IPR019489 Clp ATPase, C-terminal PJW08_07340 IPR015424 Pyridoxal phosphate-dependent transferase PJW08_07340 IPR039429 Serine hydroxymethyltransferase-like domain PJW08_07340 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site PJW08_07340 IPR001085 Serine hydroxymethyltransferase PJW08_07340 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW08_07340 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW08_07345 IPR038770 Sodium/solute symporter superfamily PJW08_07345 IPR018422 Cation/H+ exchanger, CPA1 family PJW08_07345 IPR006153 Cation/H+ exchanger PJW08_07370 IPR014014 RNA helicase, DEAD-box type, Q motif PJW08_07370 IPR001650 Helicase, C-terminal PJW08_07370 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_07370 IPR014001 Helicase superfamily 1/2, ATP-binding domain PJW08_07370 IPR011545 DEAD/DEAH box helicase domain PJW08_07375 IPR012156 Cold shock, CspA PJW08_07375 IPR011129 Cold shock domain PJW08_07375 IPR019844 Cold-shock (CSD) domain PJW08_07375 IPR002059 Cold-shock protein, DNA-binding PJW08_07375 IPR012340 Nucleic acid-binding, OB-fold PJW08_07380 IPR012156 Cold shock, CspA PJW08_07380 IPR011129 Cold shock domain PJW08_07380 IPR019844 Cold-shock (CSD) domain PJW08_07380 IPR012340 Nucleic acid-binding, OB-fold PJW08_07380 IPR002059 Cold-shock protein, DNA-binding PJW08_07390 IPR012156 Cold shock, CspA PJW08_07390 IPR011129 Cold shock domain PJW08_07390 IPR012340 Nucleic acid-binding, OB-fold PJW08_07390 IPR002059 Cold-shock protein, DNA-binding PJW08_07390 IPR019844 Cold-shock (CSD) domain PJW08_07405 IPR018211 Alcohol dehydrogenase, iron-type, conserved site PJW08_07405 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA PJW08_07415 IPR013570 Transcription regulator YsiA, C-terminal PJW08_07415 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PJW08_07415 IPR001647 DNA-binding HTH domain, TetR-type PJW08_07415 IPR009057 Homeobox-like domain superfamily PJW08_07425 IPR017202 Sensor histidine kinase LiaS/VraS PJW08_07425 IPR003594 Histidine kinase/HSP90-like ATPase PJW08_07425 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain PJW08_07425 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW08_07445 IPR002059 Cold-shock protein, DNA-binding PJW08_07445 IPR012340 Nucleic acid-binding, OB-fold PJW08_07445 IPR011129 Cold shock domain PJW08_07445 IPR012156 Cold shock, CspA PJW08_07445 IPR019844 Cold-shock (CSD) domain PJW08_07450 IPR011991 ArsR-like helix-turn-helix domain PJW08_07450 IPR000485 AsnC-type HTH domain PJW08_07450 IPR019888 Transcription regulator AsnC-type PJW08_07450 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PJW08_07450 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PJW08_07450 IPR036388 Winged helix-like DNA-binding domain superfamily PJW08_07450 IPR036390 Winged helix DNA-binding domain superfamily PJW08_07450 IPR011008 Dimeric alpha-beta barrel PJW08_07495 IPR020103 Pseudouridine synthase, catalytic domain superfamily PJW08_07495 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site PJW08_07495 IPR006145 Pseudouridine synthase, RsuA/RluA PJW08_07500 IPR036390 Winged helix DNA-binding domain superfamily PJW08_07500 IPR036388 Winged helix-like DNA-binding domain superfamily PJW08_07500 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PJW08_07500 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PJW08_07500 IPR019888 Transcription regulator AsnC-type PJW08_07500 IPR011008 Dimeric alpha-beta barrel PJW08_07500 IPR000485 AsnC-type HTH domain PJW08_07500 IPR011991 ArsR-like helix-turn-helix domain PJW08_07540 IPR001498 Impact, N-terminal PJW08_07540 IPR015796 Impact family, bacterial/archaeal PJW08_07540 IPR023582 Impact family PJW08_07540 IPR035647 EF-G domain III/V-like PJW08_07540 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal PJW08_07540 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site PJW08_07540 IPR036956 Impact, N-terminal domain superfamily PJW08_07540 IPR020568 Ribosomal protein S5 domain 2-type fold PJW08_07550 IPR041492 Haloacid dehalogenase-like hydrolase PJW08_07550 IPR036412 HAD-like superfamily PJW08_07550 IPR006439 HAD hydrolase, subfamily IA PJW08_07550 IPR023214 HAD superfamily PJW08_07550 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PJW08_07555 IPR016192 APOBEC/CMP deaminase, zinc-binding PJW08_07555 IPR002125 Cytidine and deoxycytidylate deaminase domain PJW08_07555 IPR016193 Cytidine deaminase-like PJW08_07555 IPR024072 Dihydrofolate reductase-like domain superfamily PJW08_07555 IPR004794 Riboflavin biosynthesis protein RibD PJW08_07555 IPR011549 Riboflavin-specific deaminase, C-terminal PJW08_07555 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal PJW08_07580 IPR016193 Cytidine deaminase-like PJW08_07580 IPR003786 Sulfur carrier protein FdhD PJW08_07635 IPR013785 Aldolase-type TIM barrel PJW08_07635 IPR005720 Dihydroorotate dehydrogenase domain PJW08_07635 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 PJW08_07635 IPR005719 Dihydroorotate dehydrogenase, class 2 PJW08_07650 IPR007346 Endonuclease I PJW08_07710 IPR003593 AAA+ ATPase domain PJW08_07710 IPR003439 ABC transporter-like PJW08_07710 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_07710 IPR032781 ABC-transporter extension domain PJW08_07755 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA PJW08_07755 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PJW08_07755 IPR001036 Acriflavin resistance protein PJW08_07770 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase PJW08_07770 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain PJW08_07770 IPR029069 HotDog domain superfamily PJW08_07770 IPR006683 Thioesterase domain PJW08_07800 IPR039426 Vitamin B12 transporter BtuB-like PJW08_07800 IPR012910 TonB-dependent receptor, plug domain PJW08_07800 IPR037066 TonB-dependent receptor, plug domain superfamily PJW08_07800 IPR000531 TonB-dependent receptor-like, beta-barrel PJW08_07800 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor PJW08_07800 IPR011276 TonB-dependent haem/haemoglobin receptor PJW08_07800 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW08_07800 IPR010916 TonB box, conserved site PJW08_07875 IPR011066 Mechanosensitive ion channel MscS, C-terminal PJW08_07875 IPR006686 Mechanosensitive ion channel MscS, conserved site PJW08_07875 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 PJW08_07875 IPR023408 Mechanosensitive ion channel MscS domain superfamily PJW08_07875 IPR008910 Conserved TM helix PJW08_07875 IPR010920 LSM domain superfamily PJW08_07875 IPR006685 Mechanosensitive ion channel MscS PJW08_07895 IPR017571 Cytochrome c nitrite reductase, small subunit PJW08_07895 IPR011031 Multihaem cytochrome PJW08_07895 IPR036280 Multiheme cytochrome superfamily PJW08_07895 IPR024717 Denitrification system component NapC/NirT/NrfH PJW08_07895 IPR005126 NapC/NirT cytochrome c, N-terminal PJW08_07895 IPR038266 NapC/NirT cytochrome c superfamily PJW08_07905 IPR002541 Cytochrome c assembly protein PJW08_07905 IPR007816 ResB-like domain PJW08_07910 IPR002541 Cytochrome c assembly protein PJW08_07910 IPR007816 ResB-like domain PJW08_07985 IPR024932 Flavin transferase ApbE PJW08_07985 IPR003374 ApbE-like superfamily PJW08_07985 IPR042159 Flavin-trafficking protein ApbE PJW08_07990 IPR013766 Thioredoxin domain PJW08_07990 IPR036249 Thioredoxin-like superfamily PJW08_08040 IPR008995 Molybdate/tungstate binding, C-terminal PJW08_08040 IPR015853 ABC transporter, ferric cation import, FbpC PJW08_08040 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_08040 IPR003439 ABC transporter-like PJW08_08040 IPR003593 AAA+ ATPase domain PJW08_08040 IPR013611 Transport-associated OB, type 2 PJW08_08040 IPR017871 ABC transporter, conserved site PJW08_08055 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like PJW08_08055 IPR029345 Maltose transport system permease protein MalF, P2 domain PJW08_08055 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PJW08_08055 IPR035906 MetI-like superfamily PJW08_08055 IPR035277 MalF, N-terminal PJW08_08085 IPR026045 Ferric binding protein PJW08_08085 IPR006059 Bacterial extracellular solute-binding protein PJW08_08125 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type PJW08_08125 IPR006179 5'-Nucleotidase/apyrase PJW08_08125 IPR029052 Metallo-dependent phosphatase-like PJW08_08135 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site PJW08_08135 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily PJW08_08135 IPR005671 2-isopropylmalate synthase, bacterial-type PJW08_08135 IPR000891 Pyruvate carboxyltransferase PJW08_08135 IPR013785 Aldolase-type TIM barrel PJW08_08135 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain PJW08_08155 IPR004839 Aminotransferase, class I/classII PJW08_08155 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW08_08155 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW08_08155 IPR015424 Pyridoxal phosphate-dependent transferase PJW08_08155 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site PJW08_08165 IPR023271 Aquaporin-like PJW08_08165 IPR034294 Aquaporin transporter PJW08_08165 IPR023743 Aquaporin Z PJW08_08165 IPR000425 Major intrinsic protein PJW08_08165 IPR022357 Major intrinsic protein, conserved site PJW08_08185 IPR003698 Lipoyl synthase PJW08_08185 IPR007197 Radical SAM PJW08_08185 IPR006638 Elp3/MiaB/NifB PJW08_08185 IPR013785 Aldolase-type TIM barrel PJW08_08220 IPR001650 Helicase, C-terminal PJW08_08220 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_08220 IPR004609 ATP-dependent DNA helicase RecG PJW08_08220 IPR011545 DEAD/DEAH box helicase domain PJW08_08220 IPR014001 Helicase superfamily 1/2, ATP-binding domain PJW08_08220 IPR012340 Nucleic acid-binding, OB-fold PJW08_08220 IPR033454 RecG, wedge domain PJW08_08230 IPR004573 rRNA small subunit methyltransferase B PJW08_08230 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW08_08230 IPR035926 NusB-like superfamily PJW08_08230 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site PJW08_08230 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type PJW08_08230 IPR006027 NusB/RsmB/TIM44 PJW08_08230 IPR023267 RNA (C5-cytosine) methyltransferase PJW08_08245 IPR001650 Helicase, C-terminal PJW08_08245 IPR011545 DEAD/DEAH box helicase domain PJW08_08245 IPR030880 DEAD-box ATP-dependent RNA helicase CshA PJW08_08245 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_08245 IPR014001 Helicase superfamily 1/2, ATP-binding domain PJW08_08245 IPR014014 RNA helicase, DEAD-box type, Q motif PJW08_08245 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PJW08_08280 IPR010101 TonB-dependent vitamin B12 transporter BtuB PJW08_08280 IPR039426 Vitamin B12 transporter BtuB-like PJW08_08280 IPR012910 TonB-dependent receptor, plug domain PJW08_08280 IPR037066 TonB-dependent receptor, plug domain superfamily PJW08_08280 IPR000531 TonB-dependent receptor-like, beta-barrel PJW08_08280 IPR010916 TonB box, conserved site PJW08_08280 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW08_08280 IPR010917 TonB-dependent receptor, conserved site PJW08_08295 IPR022941 Signal recognition particle, SRP54 subunit PJW08_08295 IPR004780 Signal recognition particle protein PJW08_08295 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily PJW08_08295 IPR013822 Signal recognition particle SRP54, helical bundle PJW08_08295 IPR004125 Signal recognition particle, SRP54 subunit, M-domain PJW08_08295 IPR003593 AAA+ ATPase domain PJW08_08295 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain PJW08_08295 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily PJW08_08295 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_08350 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type PJW08_08350 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site PJW08_08350 IPR023034 Peptidyl-prolyl isomerase SurA PJW08_08350 IPR015391 SurA N-terminal PJW08_08350 IPR027304 Trigger factor/SurA domain superfamily PJW08_08370 IPR036388 Winged helix-like DNA-binding domain superfamily PJW08_08370 IPR018982 RQC domain PJW08_08370 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain PJW08_08370 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_08370 IPR014001 Helicase superfamily 1/2, ATP-binding domain PJW08_08370 IPR001650 Helicase, C-terminal PJW08_08370 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial PJW08_08370 IPR011545 DEAD/DEAH box helicase domain PJW08_08370 IPR010997 HRDC-like superfamily PJW08_08370 IPR004589 DNA helicase, ATP-dependent, RecQ type PJW08_08370 IPR002121 HRDC domain PJW08_08395 IPR003680 Flavodoxin-like fold PJW08_08395 IPR029039 Flavoprotein-like superfamily PJW08_08400 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PJW08_08400 IPR000241 Putative RNA methylase domain PJW08_08400 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW08_08400 IPR004114 THUMP domain PJW08_08420 IPR001095 Acetyl-CoA carboxylase, alpha subunit PJW08_08420 IPR029045 ClpP/crotonase-like domain superfamily PJW08_08420 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal PJW08_08440 IPR002942 RNA-binding S4 domain PJW08_08440 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site PJW08_08440 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F PJW08_08440 IPR036986 RNA-binding S4 domain superfamily PJW08_08440 IPR020103 Pseudouridine synthase, catalytic domain superfamily PJW08_08440 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain PJW08_08440 IPR006145 Pseudouridine synthase, RsuA/RluA PJW08_08570 IPR003136 Cytidylate kinase PJW08_08570 IPR011994 Cytidylate kinase domain PJW08_08570 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_08590 IPR004821 Cytidyltransferase-like domain PJW08_08590 IPR001980 Phosphopantetheine adenylyltransferase PJW08_08590 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW08_08595 IPR001250 Mannose-6-phosphate isomerase, type I PJW08_08595 IPR016305 Mannose-6-phosphate isomerase PJW08_08595 IPR018050 Phosphomannose isomerase, type I, conserved site PJW08_08595 IPR014710 RmlC-like jelly roll fold PJW08_08595 IPR011051 RmlC-like cupin domain superfamily PJW08_08600 IPR001250 Mannose-6-phosphate isomerase, type I PJW08_08600 IPR016305 Mannose-6-phosphate isomerase PJW08_08600 IPR018050 Phosphomannose isomerase, type I, conserved site PJW08_08600 IPR011051 RmlC-like cupin domain superfamily PJW08_08600 IPR014710 RmlC-like jelly roll fold PJW08_08610 IPR011006 CheY-like superfamily PJW08_08610 IPR001867 OmpR/PhoB-type DNA-binding domain PJW08_08610 IPR001789 Signal transduction response regulator, receiver domain PJW08_08610 IPR039420 Transcriptional regulatory protein WalR-like PJW08_08610 IPR036388 Winged helix-like DNA-binding domain superfamily PJW08_08655 IPR001789 Signal transduction response regulator, receiver domain PJW08_08655 IPR007492 LytTR DNA-binding domain PJW08_08655 IPR011006 CheY-like superfamily PJW08_08665 IPR036249 Thioredoxin-like superfamily PJW08_08665 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW08_08665 IPR023527 Adaptive-response sensory-kinase SasA PJW08_08665 IPR011649 KaiB domain PJW08_08665 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW08_08665 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW08_08665 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW08_08665 IPR003594 Histidine kinase/HSP90-like ATPase PJW08_08665 IPR005467 Histidine kinase domain PJW08_08690 IPR011006 CheY-like superfamily PJW08_08690 IPR001789 Signal transduction response regulator, receiver domain PJW08_08710 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily PJW08_08710 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain PJW08_08710 IPR036188 FAD/NAD(P)-binding domain superfamily PJW08_08710 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily PJW08_08710 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal PJW08_08710 IPR005288 L-aspartate oxidase PJW08_08740 IPR006657 Molybdopterin dinucleotide-binding domain PJW08_08740 IPR006656 Molybdopterin oxidoreductase PJW08_08740 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain PJW08_08740 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site PJW08_08740 IPR010051 Periplasmic nitrate reductase, large subunit PJW08_08740 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain PJW08_08740 IPR006311 Twin-arginine translocation pathway, signal sequence PJW08_08740 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PJW08_08740 IPR009010 Aspartate decarboxylase-like domain superfamily PJW08_08745 IPR009010 Aspartate decarboxylase-like domain superfamily PJW08_08745 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain PJW08_08745 IPR006657 Molybdopterin dinucleotide-binding domain PJW08_08745 IPR006656 Molybdopterin oxidoreductase PJW08_08745 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain PJW08_08745 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site PJW08_08745 IPR010051 Periplasmic nitrate reductase, large subunit PJW08_08745 IPR006311 Twin-arginine translocation pathway, signal sequence PJW08_08750 IPR006311 Twin-arginine translocation pathway, signal sequence PJW08_08750 IPR010051 Periplasmic nitrate reductase, large subunit PJW08_08750 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site PJW08_08750 IPR009010 Aspartate decarboxylase-like domain superfamily PJW08_08750 IPR006656 Molybdopterin oxidoreductase PJW08_08750 IPR006657 Molybdopterin dinucleotide-binding domain PJW08_08750 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain PJW08_08750 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain PJW08_08755 IPR010051 Periplasmic nitrate reductase, large subunit PJW08_08755 IPR006311 Twin-arginine translocation pathway, signal sequence PJW08_08755 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain PJW08_08755 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PJW08_08755 IPR006657 Molybdopterin dinucleotide-binding domain PJW08_08755 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain PJW08_08755 IPR006656 Molybdopterin oxidoreductase PJW08_08755 IPR009010 Aspartate decarboxylase-like domain superfamily PJW08_08770 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PJW08_08770 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PJW08_08790 IPR004027 SEC-C motif PJW08_08790 IPR032710 NTF2-like domain superfamily PJW08_08790 IPR023006 Uncharacterised protein family UPF0225 PJW08_08800 IPR013750 GHMP kinase, C-terminal domain PJW08_08800 IPR036554 GHMP kinase, C-terminal domain superfamily PJW08_08800 IPR006204 GHMP kinase N-terminal domain PJW08_08800 IPR006203 GHMP kinase, ATP-binding, conserved site PJW08_08800 IPR000870 Homoserine kinase PJW08_08800 IPR020568 Ribosomal protein S5 domain 2-type fold PJW08_08800 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PJW08_08820 IPR020103 Pseudouridine synthase, catalytic domain superfamily PJW08_08820 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site PJW08_08820 IPR006145 Pseudouridine synthase, RsuA/RluA PJW08_08825 IPR020103 Pseudouridine synthase, catalytic domain superfamily PJW08_08825 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site PJW08_08825 IPR006145 Pseudouridine synthase, RsuA/RluA PJW08_08865 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site PJW08_08865 IPR022278 Phosphoserine aminotransferase PJW08_08865 IPR015424 Pyridoxal phosphate-dependent transferase PJW08_08865 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW08_08865 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW08_08865 IPR000192 Aminotransferase class V domain PJW08_08895 IPR039657 Dimethylallyltransferase PJW08_08895 IPR018022 IPP transferase PJW08_08895 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_08930 IPR013785 Aldolase-type TIM barrel PJW08_08930 IPR006062 Histidine biosynthesis PJW08_08930 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase PJW08_08930 IPR011060 Ribulose-phosphate binding barrel PJW08_08930 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA PJW08_08945 IPR004839 Aminotransferase, class I/classII PJW08_08945 IPR005861 Histidinol-phosphate aminotransferase family PJW08_08945 IPR015424 Pyridoxal phosphate-dependent transferase PJW08_08945 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW08_08945 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW08_08950 IPR016161 Aldehyde/histidinol dehydrogenase PJW08_08950 IPR001692 Histidinol dehydrogenase, conserved site PJW08_08950 IPR022695 Histidinol dehydrogenase, monofunctional PJW08_08950 IPR012131 Histidinol dehydrogenase PJW08_08955 IPR001348 ATP phosphoribosyltransferase HisG PJW08_08955 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PJW08_08955 IPR011322 Nitrogen regulatory PII-like, alpha/beta PJW08_08955 IPR013115 Histidine biosynthesis HisG, C-terminal PJW08_08955 IPR018198 ATP phosphoribosyltransferase, conserved site PJW08_08955 IPR013820 ATP phosphoribosyltransferase, catalytic domain PJW08_08955 IPR020621 ATP phosphoribosyltransferase HisG, long form PJW08_08965 IPR029041 FAD-linked oxidoreductase-like PJW08_08965 IPR002872 Proline dehydrogenase domain PJW08_08965 IPR015659 Proline oxidase family PJW08_08975 IPR032466 Metal-dependent hydrolase PJW08_08975 IPR005920 Imidazolonepropionase PJW08_08975 IPR006680 Amidohydrolase-related PJW08_08975 IPR011059 Metal-dependent hydrolase, composite domain superfamily PJW08_08990 IPR020855 Ureohydrolase, manganese-binding site PJW08_08990 IPR006035 Ureohydrolase PJW08_08990 IPR005923 Formiminoglutamase PJW08_08990 IPR023696 Ureohydrolase domain superfamily PJW08_09025 IPR011006 CheY-like superfamily PJW08_09025 IPR007492 LytTR DNA-binding domain PJW08_09025 IPR001789 Signal transduction response regulator, receiver domain PJW08_09030 IPR010559 Signal transduction histidine kinase, internal region PJW08_09030 IPR033479 Double Cache domain 1 PJW08_09030 IPR003660 HAMP domain PJW08_09030 IPR003594 Histidine kinase/HSP90-like ATPase PJW08_09030 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW08_09030 IPR005467 Histidine kinase domain PJW08_09030 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW08_09050 IPR004374 Peptide chain release factor 2 PJW08_09050 IPR000352 Peptide chain release factor class I PJW08_09050 IPR005139 Peptide chain release factor PJW08_09055 IPR006659 Arsenate reductase PJW08_09055 IPR006660 Arsenate reductase-like PJW08_09055 IPR036249 Thioredoxin-like superfamily PJW08_09065 IPR027791 Galactosyltransferase, C-terminal PJW08_09065 IPR001173 Glycosyltransferase 2-like PJW08_09065 IPR029044 Nucleotide-diphospho-sugar transferases PJW08_09075 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) PJW08_09075 IPR036291 NAD(P)-binding domain superfamily PJW08_09105 IPR008331 Ferritin/DPS protein domain PJW08_09105 IPR041719 Ferritin, prokaryotic-type PJW08_09105 IPR009078 Ferritin-like superfamily PJW08_09105 IPR001519 Ferritin PJW08_09105 IPR012347 Ferritin-like PJW08_09105 IPR009040 Ferritin-like diiron domain PJW08_09110 IPR013785 Aldolase-type TIM barrel PJW08_09110 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA PJW08_09110 IPR020625 Schiff base-forming aldolase, active site PJW08_09110 IPR002220 DapA-like PJW08_09130 IPR010998 Integrase/recombinase, N-terminal PJW08_09130 IPR004107 Integrase, SAM-like, N-terminal PJW08_09130 IPR011010 DNA breaking-rejoining enzyme, catalytic core PJW08_09130 IPR013762 Integrase-like, catalytic domain superfamily PJW08_09130 IPR002104 Integrase, catalytic domain PJW08_09260 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) PJW08_09260 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type PJW08_09260 IPR029052 Metallo-dependent phosphatase-like PJW08_09270 IPR011009 Protein kinase-like domain superfamily PJW08_09270 IPR005543 PASTA domain PJW08_09270 IPR000719 Protein kinase domain PJW08_09270 IPR017441 Protein kinase, ATP binding site PJW08_09270 IPR008271 Serine/threonine-protein kinase, active site PJW08_09405 IPR003593 AAA+ ATPase domain PJW08_09405 IPR010285 DNA helicase Pif1-like PJW08_09405 IPR029491 Helicase Helix-turn-helix domain PJW08_09405 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_09410 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_09410 IPR010285 DNA helicase Pif1-like PJW08_09410 IPR003840 DNA helicase PJW08_09410 IPR003593 AAA+ ATPase domain PJW08_09425 IPR025948 HTH-like domain PJW08_09425 IPR001584 Integrase, catalytic core PJW08_09425 IPR012337 Ribonuclease H-like superfamily PJW08_09425 IPR036397 Ribonuclease H superfamily PJW08_09430 IPR023576 UbiE/COQ5 methyltransferase, conserved site PJW08_09430 IPR004033 UbiE/COQ5 methyltransferase PJW08_09430 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW08_09430 IPR014122 Demethylmenaquinone methyltransferase PJW08_09490 IPR036397 Ribonuclease H superfamily PJW08_09490 IPR012337 Ribonuclease H-like superfamily PJW08_09490 IPR001584 Integrase, catalytic core PJW08_09490 IPR025948 HTH-like domain PJW08_09590 IPR036397 Ribonuclease H superfamily PJW08_09590 IPR001584 Integrase, catalytic core PJW08_09590 IPR012337 Ribonuclease H-like superfamily PJW08_09590 IPR025948 HTH-like domain PJW08_09605 IPR036165 YefM-like superfamily PJW08_09605 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM PJW08_09610 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily PJW08_09610 IPR009614 Toxin YoeB PJW08_09660 IPR036390 Winged helix DNA-binding domain superfamily PJW08_09660 IPR036388 Winged helix-like DNA-binding domain superfamily PJW08_09660 IPR018982 RQC domain PJW08_09660 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain PJW08_09660 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_09660 IPR010997 HRDC-like superfamily PJW08_09660 IPR014001 Helicase superfamily 1/2, ATP-binding domain PJW08_09660 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial PJW08_09660 IPR004589 DNA helicase, ATP-dependent, RecQ type PJW08_09660 IPR011545 DEAD/DEAH box helicase domain PJW08_09660 IPR002121 HRDC domain PJW08_09660 IPR001650 Helicase, C-terminal PJW08_09670 IPR000890 Aliphatic acid kinase, short-chain PJW08_09670 IPR023865 Aliphatic acid kinase, short-chain, conserved site PJW08_09670 IPR011245 Butyrate kinase PJW08_09675 IPR012147 Phosphate acetyl/butyryltransferase PJW08_09675 IPR002505 Phosphate acetyl/butaryl transferase PJW08_09675 IPR014079 Phosphate butyryltransferase PJW08_09705 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain PJW08_09705 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family PJW08_09705 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site PJW08_09705 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain PJW08_09705 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I PJW08_09705 IPR036291 NAD(P)-binding domain superfamily PJW08_09710 IPR036034 PDZ superfamily PJW08_09710 IPR011782 Peptidase S1C, Do PJW08_09710 IPR009003 Peptidase S1, PA clan PJW08_09710 IPR001940 Peptidase S1C PJW08_09710 IPR041489 PDZ domain 6 PJW08_09710 IPR001478 PDZ domain PJW08_09725 IPR003770 Endolytic murein transglycosylase PJW08_09760 IPR035986 PKD domain superfamily PJW08_09760 IPR000601 PKD domain PJW08_09760 IPR002169 Peptidase M9A/M9B, collagenase, bacterial PJW08_09760 IPR013661 Peptidase M9, collagenase, N-terminal domain PJW08_09760 IPR013783 Immunoglobulin-like fold PJW08_09760 IPR041379 Collagenase ColG, catalytic helper subdomain PJW08_09760 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily PJW08_09760 IPR022409 PKD/Chitinase domain PJW08_09765 IPR000601 PKD domain PJW08_09765 IPR035986 PKD domain superfamily PJW08_09765 IPR002169 Peptidase M9A/M9B, collagenase, bacterial PJW08_09765 IPR013661 Peptidase M9, collagenase, N-terminal domain PJW08_09765 IPR013783 Immunoglobulin-like fold PJW08_09765 IPR022409 PKD/Chitinase domain PJW08_09765 IPR041379 Collagenase ColG, catalytic helper subdomain PJW08_09790 IPR000878 Tetrapyrrole methylase PJW08_09790 IPR035996 Tetrapyrrole methylase superfamily PJW08_09790 IPR014777 Tetrapyrrole methylase, subdomain 1 PJW08_09790 IPR014776 Tetrapyrrole methylase, subdomain 2 PJW08_09790 IPR018063 SAM-dependent methyltransferase RsmI, conserved site PJW08_09790 IPR008189 rRNA small subunit methyltransferase I PJW08_09800 IPR029069 HotDog domain superfamily PJW08_09800 IPR006683 Thioesterase domain PJW08_09800 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family PJW08_09830 IPR002043 Uracil-DNA glycosylase family 1 PJW08_09830 IPR018085 Uracil-DNA glycosylase, active site PJW08_09830 IPR005122 Uracil-DNA glycosylase-like PJW08_09830 IPR036895 Uracil-DNA glycosylase-like domain superfamily PJW08_09845 IPR003804 L-lactate permease PJW08_09855 IPR000432 DNA mismatch repair protein MutS, C-terminal PJW08_09855 IPR007696 DNA mismatch repair protein MutS, core PJW08_09855 IPR036187 DNA mismatch repair protein MutS, core domain superfamily PJW08_09855 IPR005747 Endonuclease MutS2 PJW08_09855 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_09855 IPR002625 Smr domain PJW08_09855 IPR036063 Smr domain superfamily PJW08_09865 IPR002528 Multi antimicrobial extrusion protein PJW08_09870 IPR036249 Thioredoxin-like superfamily PJW08_09870 IPR013766 Thioredoxin domain PJW08_09870 IPR002065 Thiol peroxidase Tpx PJW08_09870 IPR018219 Thiol peroxidase conserved site PJW08_09870 IPR013740 Redoxin PJW08_09905 IPR013785 Aldolase-type TIM barrel PJW08_09905 IPR004136 Nitronate monooxygenase PJW08_09915 IPR023382 Adenine nucleotide alpha hydrolase-like domains PJW08_09915 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW08_09915 IPR004506 tRNA-specific 2-thiouridylase PJW08_09930 IPR005746 Thioredoxin PJW08_09930 IPR013766 Thioredoxin domain PJW08_09930 IPR036249 Thioredoxin-like superfamily PJW08_09930 IPR017937 Thioredoxin, conserved site PJW08_09995 IPR035390 Thiol-activated cytolysin C-terminal PJW08_09995 IPR001869 Thiol-activated cytolysin PJW08_09995 IPR036363 Thiol-activated cytolysin, alpha-beta domain superfamily PJW08_09995 IPR036359 Thiol-activated cytolysin superfamily PJW08_09995 IPR038700 Thiol-activated cytolysin, C-terminal domain superfamily PJW08_10060 IPR012093 Pirin PJW08_10060 IPR008778 Pirin, C-terminal domain PJW08_10060 IPR003829 Pirin, N-terminal domain PJW08_10060 IPR011051 RmlC-like cupin domain superfamily PJW08_10060 IPR014710 RmlC-like jelly roll fold PJW08_10120 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PJW08_10120 IPR003356 DNA methylase, adenine-specific PJW08_10120 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW08_10355 IPR001209 Ribosomal protein S14 PJW08_10355 IPR018271 Ribosomal protein S14, conserved site PJW08_10355 IPR023036 Ribosomal protein S14, bacterial/plastid PJW08_10360 IPR002132 Ribosomal protein L5 PJW08_10360 IPR020930 Ribosomal protein L5, bacterial-type PJW08_10360 IPR022803 Ribosomal protein L5 domain superfamily PJW08_10360 IPR031310 Ribosomal protein L5, N-terminal PJW08_10360 IPR031309 Ribosomal protein L5, C-terminal PJW08_10365 IPR005825 Ribosomal protein L24/L26, conserved site PJW08_10365 IPR014722 Ribosomal protein L2, domain 2 PJW08_10365 IPR041988 Ribosomal Protein L26/L24, KOW domain PJW08_10365 IPR005824 KOW PJW08_10365 IPR008991 Translation protein SH3-like domain superfamily PJW08_10365 IPR003256 Ribosomal protein L24 PJW08_10375 IPR012340 Nucleic acid-binding, OB-fold PJW08_10375 IPR019984 30S ribosomal protein S17 PJW08_10375 IPR000266 Ribosomal protein S17/S11 PJW08_10375 IPR019979 Ribosomal protein S17, conserved site PJW08_10380 IPR001854 Ribosomal protein L29/L35 PJW08_10380 IPR036049 Ribosomal protein L29/L35 superfamily PJW08_10380 IPR018254 Ribosomal protein L29, conserved site PJW08_10385 IPR016180 Ribosomal protein L10e/L16 PJW08_10385 IPR036920 Ribosomal protein L10e/L16 superfamily PJW08_10385 IPR000114 Ribosomal protein L16 PJW08_10385 IPR020798 Ribosomal protein L16, conserved site PJW08_10390 IPR004044 K Homology domain, type 2 PJW08_10390 IPR036419 Ribosomal protein S3, C-terminal domain superfamily PJW08_10390 IPR018280 Ribosomal protein S3, conserved site PJW08_10390 IPR005704 Ribosomal protein S3, bacterial-type PJW08_10390 IPR009019 K homology domain superfamily, prokaryotic type PJW08_10390 IPR001351 Ribosomal protein S3, C-terminal PJW08_10390 IPR015946 K homology domain-like, alpha/beta PJW08_10390 IPR004087 K Homology domain PJW08_10400 IPR002222 Ribosomal protein S19/S15 PJW08_10400 IPR005732 Ribosomal protein S19, bacterial-type PJW08_10400 IPR020934 Ribosomal protein S19 conserved site PJW08_10400 IPR023575 Ribosomal protein S19, superfamily PJW08_10410 IPR012678 Ribosomal protein L23/L15e core domain superfamily PJW08_10410 IPR013025 Ribosomal protein L25/L23 PJW08_10410 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily PJW08_10420 IPR019927 Ribosomal protein L3, bacterial/organelle-type PJW08_10420 IPR000597 Ribosomal protein L3 PJW08_10420 IPR009000 Translation protein, beta-barrel domain superfamily PJW08_10420 IPR019926 Ribosomal protein L3, conserved site PJW08_10435 IPR020606 Ribosomal protein S7, conserved site PJW08_10435 IPR000235 Ribosomal protein S5/S7 PJW08_10435 IPR023798 Ribosomal protein S7 domain PJW08_10435 IPR036823 Ribosomal protein S7 domain superfamily PJW08_10435 IPR005717 Ribosomal protein S7, bacterial/organellar-type PJW08_10440 IPR005679 Ribosomal protein S12, bacterial-type PJW08_10440 IPR012340 Nucleic acid-binding, OB-fold PJW08_10440 IPR006032 Ribosomal protein S12/S23 PJW08_10450 IPR000531 TonB-dependent receptor-like, beta-barrel PJW08_10450 IPR008969 Carboxypeptidase-like, regulatory domain superfamily PJW08_10450 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site PJW08_10450 IPR023996 TonB-dependent outer membrane protein, SusC/RagA PJW08_10450 IPR037066 TonB-dependent receptor, plug domain superfamily PJW08_10450 IPR012910 TonB-dependent receptor, plug domain PJW08_10450 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW08_10455 IPR008969 Carboxypeptidase-like, regulatory domain superfamily PJW08_10455 IPR023996 TonB-dependent outer membrane protein, SusC/RagA PJW08_10455 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site PJW08_10455 IPR000531 TonB-dependent receptor-like, beta-barrel PJW08_10455 IPR012910 TonB-dependent receptor, plug domain PJW08_10455 IPR037066 TonB-dependent receptor, plug domain superfamily PJW08_10485 IPR022764 Peptidase S54, rhomboid domain PJW08_10485 IPR035952 Rhomboid-like superfamily PJW08_10490 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_10490 IPR003593 AAA+ ATPase domain PJW08_10490 IPR032423 AAA C-terminal domain PJW08_10490 IPR003959 ATPase, AAA-type, core PJW08_10490 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal PJW08_10490 IPR021886 MgsA AAA+ ATPase C-terminal PJW08_10510 IPR020891 Uncharacterised protein family UPF0758, conserved site PJW08_10510 IPR001405 Uncharacterised protein family UPF0758 PJW08_10510 IPR025657 RadC-like JAB domain PJW08_10510 IPR037518 MPN domain PJW08_10510 IPR010994 RuvA domain 2-like PJW08_10515 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily PJW08_10515 IPR006036 Potassium uptake protein TrkA PJW08_10515 IPR036291 NAD(P)-binding domain superfamily PJW08_10515 IPR003148 Regulator of K+ conductance, N-terminal PJW08_10515 IPR006037 Regulator of K+ conductance, C-terminal PJW08_10590 IPR036188 FAD/NAD(P)-binding domain superfamily PJW08_10590 IPR027545 Kynurenine 3-monooxygenase PJW08_10590 IPR002938 FAD-binding domain PJW08_10605 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain PJW08_10605 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PJW08_10605 IPR036291 NAD(P)-binding domain superfamily PJW08_10605 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PJW08_10605 IPR002912 ACT domain PJW08_10605 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PJW08_10620 IPR023523 Histidine decarboxylase, bacteria PJW08_10620 IPR002129 Pyridoxal phosphate-dependent decarboxylase PJW08_10620 IPR015424 Pyridoxal phosphate-dependent transferase PJW08_10620 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW08_10715 IPR036737 OmpA-like domain superfamily PJW08_10715 IPR006664 Outer membrane protein, bacterial PJW08_10715 IPR006690 Outer membrane protein, OmpA-like, conserved site PJW08_10715 IPR006665 OmpA-like domain PJW08_10715 IPR002368 Outer membrane protein, OmpA PJW08_10715 IPR000498 Outer membrane protein OmpA-like, transmembrane domain PJW08_10715 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel PJW08_10775 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW08_10775 IPR007848 Methyltransferase small domain PJW08_10775 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD PJW08_10775 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PJW08_10780 IPR027283 Glutamate synthase large subunit-like protein, bacteria PJW08_10780 IPR024188 Glutamate synthase large subunit-like protein PJW08_10780 IPR002932 Glutamate synthase domain PJW08_10780 IPR013785 Aldolase-type TIM barrel PJW08_10785 IPR034704 L28p-like PJW08_10785 IPR027493 Ribosomal protein L31 type B PJW08_10785 IPR042105 Ribosomal protein L31 superfamily PJW08_10785 IPR002150 Ribosomal protein L31 PJW08_10800 IPR036291 NAD(P)-binding domain superfamily PJW08_10800 IPR020904 Short-chain dehydrogenase/reductase, conserved site PJW08_10800 IPR002347 Short-chain dehydrogenase/reductase SDR PJW08_10835 IPR003313 AraC-type arabinose-binding/dimerisation domain PJW08_10835 IPR018062 HTH domain AraC-type, conserved site PJW08_10835 IPR037923 Transcription regulator HTH-like PJW08_10835 IPR009057 Homeobox-like domain superfamily PJW08_10835 IPR018060 DNA binding HTH domain, AraC-type PJW08_10845 IPR004852 Di-haem cytochrome c peroxidase PJW08_10845 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase PJW08_10845 IPR022394 Methylamine utilisation protein, MauG PJW08_10845 IPR009056 Cytochrome c-like domain PJW08_10845 IPR036909 Cytochrome c-like domain superfamily PJW08_10860 IPR000644 CBS domain PJW08_10860 IPR036318 FAD-binding, type PCMH-like superfamily PJW08_10860 IPR016169 FAD-binding, type PCMH, subdomain 2 PJW08_10860 IPR005496 Integral membrane protein TerC PJW08_10860 IPR005170 Transporter-associated domain PJW08_10865 IPR008331 Ferritin/DPS protein domain PJW08_10865 IPR009078 Ferritin-like superfamily PJW08_10865 IPR023188 DNA-binding protein Dps, conserved site PJW08_10865 IPR012347 Ferritin-like PJW08_10865 IPR002177 DNA-binding protein Dps PJW08_10870 IPR005119 LysR, substrate-binding PJW08_10870 IPR000847 Transcription regulator HTH, LysR PJW08_10870 IPR036388 Winged helix-like DNA-binding domain superfamily PJW08_10870 IPR036390 Winged helix DNA-binding domain superfamily PJW08_10885 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily PJW08_10885 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding PJW08_10885 IPR006130 Aspartate/ornithine carbamoyltransferase PJW08_10885 IPR002082 Aspartate carbamoyltransferase PJW08_10885 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain PJW08_10955 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain PJW08_10955 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like PJW08_11030 IPR001466 Beta-lactamase-related PJW08_11030 IPR012338 Beta-lactamase/transpeptidase-like PJW08_11030 IPR022849 Peptidase S12, YfeW/YbbE-like PJW08_11040 IPR019800 Glycoside hydrolase, family 3, active site PJW08_11040 IPR002772 Glycoside hydrolase family 3 C-terminal domain PJW08_11040 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily PJW08_11040 IPR001764 Glycoside hydrolase, family 3, N-terminal PJW08_11040 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily PJW08_11040 IPR017853 Glycoside hydrolase superfamily PJW08_11130 IPR008988 Transcriptional repressor, C-terminal PJW08_11130 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain PJW08_11130 IPR004408 Biotin--acetyl-CoA-carboxylase ligase PJW08_11130 IPR004409 Biotin operon repressor, helix-turn-helix domain PJW08_11130 IPR030855 Bifunctional ligase/repressor BirA PJW08_11130 IPR003142 Biotin protein ligase, C-terminal PJW08_11135 IPR004394 Protein Iojap/ribosomal silencing factor RsfS PJW08_11150 IPR000374 Phosphatidate cytidylyltransferase PJW08_11240 IPR036565 Mur-like, catalytic domain superfamily PJW08_11240 IPR036615 Mur ligase, C-terminal domain superfamily PJW08_11240 IPR013221 Mur ligase, central PJW08_11240 IPR000713 Mur ligase, N-terminal catalytic domain PJW08_11240 IPR005758 UDP-N-acetylmuramate--L-alanine ligase PJW08_11240 IPR004101 Mur ligase, C-terminal PJW08_11245 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA PJW08_11245 IPR039697 Iron-type alcohol dehydrogenase-like PJW08_11245 IPR018211 Alcohol dehydrogenase, iron-type, conserved site PJW08_11285 IPR000209 Peptidase S8/S53 domain PJW08_11285 IPR036852 Peptidase S8/S53 domain superfamily PJW08_11285 IPR023827 Peptidase S8, subtilisin, Asp-active site PJW08_11285 IPR022398 Peptidase S8, subtilisin, His-active site PJW08_11285 IPR023828 Peptidase S8, subtilisin, Ser-active site PJW08_11285 IPR015500 Peptidase S8, subtilisin-related PJW08_11285 IPR034202 Subtilisin Carlsberg-like catalytic domain PJW08_11290 IPR007484 Peptidase M28 PJW08_11305 IPR003798 DNA recombination RmuC PJW08_11310 IPR024530 Putative quorum-sensing-regulated virulence factor PJW08_11350 IPR036188 FAD/NAD(P)-binding domain superfamily PJW08_11350 IPR000960 Flavin monooxygenase FMO PJW08_11390 IPR006015 Universal stress protein A family PJW08_11390 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW08_11390 IPR006016 UspA PJW08_11405 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PJW08_11405 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PJW08_11405 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG PJW08_11405 IPR032879 FixG, C-terminal immunoglobulin-like domain PJW08_11405 IPR013783 Immunoglobulin-like fold PJW08_11410 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal PJW08_11410 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily PJW08_11410 IPR009056 Cytochrome c-like domain PJW08_11410 IPR036909 Cytochrome c-like domain superfamily PJW08_11410 IPR008168 Cytochrome c, class IC PJW08_11410 IPR004678 Cytochrome c oxidase cbb3-type, subunit III PJW08_11445 IPR028325 Voltage-gated potassium channel PJW08_11445 IPR014710 RmlC-like jelly roll fold PJW08_11445 IPR018488 Cyclic nucleotide-binding, conserved site PJW08_11445 IPR005821 Ion transport domain PJW08_11445 IPR018490 Cyclic nucleotide-binding-like PJW08_11445 IPR000595 Cyclic nucleotide-binding domain PJW08_11455 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic PJW08_11455 IPR016067 S-adenosylmethionine decarboxylase, core PJW08_11455 IPR017716 S-adenosylmethionine decarboxylase proenzyme PJW08_11465 IPR030373 Polyamine biosynthesis domain, conserved site PJW08_11465 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW08_11465 IPR001045 Spermidine/spermine synthases PJW08_11465 IPR030374 Polyamine biosynthesis domain PJW08_11490 IPR007157 PspA/IM30 PJW08_11500 IPR001387 Cro/C1-type helix-turn-helix domain PJW08_11500 IPR010982 Lambda repressor-like, DNA-binding domain superfamily PJW08_11510 IPR010723 HemN, C-terminal PJW08_11510 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN PJW08_11510 IPR023404 Radical SAM, alpha/beta horseshoe PJW08_11510 IPR006638 Elp3/MiaB/NifB PJW08_11510 IPR034505 Anaerobic coproporphyrinogen-III oxidase PJW08_11510 IPR007197 Radical SAM PJW08_11515 IPR013785 Aldolase-type TIM barrel PJW08_11515 IPR011343 Deoxyribose-phosphate aldolase PJW08_11515 IPR028581 Deoxyribose-phosphate aldolase type I PJW08_11515 IPR002915 DeoC/FbaB/ lacD aldolase PJW08_11555 IPR001790 Ribosomal protein L10P PJW08_11555 IPR022973 Ribosomal protein L10 PJW08_11560 IPR002143 Ribosomal protein L1 PJW08_11560 IPR023674 Ribosomal protein L1-like PJW08_11560 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein PJW08_11560 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich PJW08_11560 IPR023673 Ribosomal protein L1, conserved site PJW08_11560 IPR005878 Ribosomal protein L1, bacterial-type PJW08_11565 IPR020785 Ribosomal protein L11, conserved site PJW08_11565 IPR020784 Ribosomal protein L11, N-terminal PJW08_11565 IPR000911 Ribosomal protein L11/L12 PJW08_11565 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily PJW08_11565 IPR006519 Ribosomal protein L11, bacterial-type PJW08_11565 IPR020783 Ribosomal protein L11, C-terminal PJW08_11565 IPR036769 Ribosomal protein L11, C-terminal domain superfamily PJW08_11585 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PJW08_11585 IPR009000 Translation protein, beta-barrel domain superfamily PJW08_11585 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal PJW08_11585 IPR000795 Transcription factor, GTP-binding domain PJW08_11585 IPR005225 Small GTP-binding protein domain PJW08_11585 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_11585 IPR031157 Tr-type G domain, conserved site PJW08_11585 IPR033720 Elongation factor Tu, domain 2 PJW08_11585 IPR004161 Translation elongation factor EFTu-like, domain 2 PJW08_11585 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain PJW08_11585 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle PJW08_11610 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily PJW08_11610 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal PJW08_11610 IPR003489 Ribosome hibernation promoting factor/RaiA PJW08_11610 IPR036567 Ribosome hibernation promotion factor-like PJW08_11610 IPR034694 Ribosome hibernation promoting factor, long/plastid PJW08_11615 IPR010998 Integrase/recombinase, N-terminal PJW08_11615 IPR011010 DNA breaking-rejoining enzyme, catalytic core PJW08_11615 IPR013762 Integrase-like, catalytic domain superfamily PJW08_11615 IPR002104 Integrase, catalytic domain PJW08_11615 IPR023009 Tyrosine recombinase XerC/XerD PJW08_11615 IPR004107 Integrase, SAM-like, N-terminal PJW08_11620 IPR038380 Ribosomal protein S21 superfamily PJW08_11620 IPR001911 Ribosomal protein S21 PJW08_11625 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily PJW08_11625 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily PJW08_11625 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain PJW08_11625 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal PJW08_11625 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal PJW08_11625 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal PJW08_11625 IPR006089 Acyl-CoA dehydrogenase, conserved site PJW08_11635 IPR001463 Sodium:alanine symporter PJW08_11640 IPR005913 dTDP-4-dehydrorhamnose reductase family PJW08_11640 IPR036291 NAD(P)-binding domain superfamily PJW08_11640 IPR029903 RmlD-like substrate binding domain PJW08_11645 IPR026278 Potassium/proton antiporter subunit KhtT PJW08_11645 IPR006037 Regulator of K+ conductance, C-terminal PJW08_11645 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily PJW08_11690 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG PJW08_11690 IPR031100 LOG family PJW08_11700 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II PJW08_11700 IPR005475 Transketolase-like, pyrimidine-binding domain PJW08_11700 IPR033248 Transketolase, C-terminal domain PJW08_11700 IPR029061 Thiamin diphosphate-binding fold PJW08_11710 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site PJW08_11710 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain PJW08_11710 IPR000836 Phosphoribosyltransferase domain PJW08_11710 IPR005946 Ribose-phosphate pyrophosphokinase PJW08_11710 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type PJW08_11710 IPR029057 Phosphoribosyltransferase-like PJW08_11715 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal PJW08_11715 IPR016471 Nicotinamide phosphoribosyl transferase PJW08_11715 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase PJW08_11715 IPR013785 Aldolase-type TIM barrel PJW08_11730 IPR038377 Sodium/glucose symporter superfamily PJW08_11730 IPR001734 Sodium/solute symporter PJW08_11765 IPR019479 Peroxiredoxin, C-terminal PJW08_11765 IPR024706 Peroxiredoxin, AhpC-type PJW08_11765 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant PJW08_11765 IPR013766 Thioredoxin domain PJW08_11765 IPR036249 Thioredoxin-like superfamily PJW08_11770 IPR002078 RNA polymerase sigma factor 54 interaction domain PJW08_11770 IPR009057 Homeobox-like domain superfamily PJW08_11770 IPR011006 CheY-like superfamily PJW08_11770 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_11770 IPR003593 AAA+ ATPase domain PJW08_11770 IPR002197 DNA binding HTH domain, Fis-type PJW08_11770 IPR001789 Signal transduction response regulator, receiver domain PJW08_11770 IPR025944 Sigma-54 interaction domain, conserved site PJW08_11770 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PJW08_11770 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PJW08_11785 IPR025302 Domain of unknown function DUF4162 PJW08_11785 IPR017871 ABC transporter, conserved site PJW08_11785 IPR003439 ABC transporter-like PJW08_11785 IPR003593 AAA+ ATPase domain PJW08_11785 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_11800 IPR002155 Thiolase PJW08_11800 IPR016039 Thiolase-like PJW08_11800 IPR020610 Thiolase, active site PJW08_11800 IPR020617 Thiolase, C-terminal PJW08_11800 IPR020613 Thiolase, conserved site PJW08_11800 IPR020616 Thiolase, N-terminal PJW08_11800 IPR020615 Thiolase, acyl-enzyme intermediate active site PJW08_11815 IPR036921 PurM-like, N-terminal domain superfamily PJW08_11815 IPR010918 PurM-like, C-terminal domain PJW08_11815 IPR036676 PurM-like, C-terminal domain superfamily PJW08_11815 IPR016188 PurM-like, N-terminal domain PJW08_11815 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase PJW08_11840 IPR004481 Sodium/potassium/calcium exchanger PJW08_11840 IPR004837 Sodium/calcium exchanger membrane region PJW08_11875 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PJW08_11875 IPR003769 Adaptor protein ClpS, core PJW08_11875 IPR022935 ATP-dependent Clp protease adaptor protein ClpS PJW08_11900 IPR013766 Thioredoxin domain PJW08_11900 IPR036249 Thioredoxin-like superfamily PJW08_11900 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant PJW08_11910 IPR035906 MetI-like superfamily PJW08_11910 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PJW08_11940 IPR007492 LytTR DNA-binding domain PJW08_11940 IPR011006 CheY-like superfamily PJW08_11940 IPR001789 Signal transduction response regulator, receiver domain PJW08_11960 IPR023637 Urocanase PJW08_11960 IPR035401 Urocanase, C-terminal domain PJW08_11960 IPR035400 Urocanase, N-terminal domain PJW08_11960 IPR035085 Urocanase, Rossmann-like domain PJW08_11960 IPR036190 Urocanase superfamily PJW08_11960 IPR038364 Urocanase, central domain superfamily PJW08_11960 IPR023636 Urocanase conserved site PJW08_11970 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain PJW08_11970 IPR000847 Transcription regulator HTH, LysR PJW08_11970 IPR036388 Winged helix-like DNA-binding domain superfamily PJW08_11970 IPR036390 Winged helix DNA-binding domain superfamily PJW08_11970 IPR005119 LysR, substrate-binding PJW08_12000 IPR013785 Aldolase-type TIM barrel PJW08_12000 IPR018204 Tryptophan synthase, alpha chain, active site PJW08_12000 IPR002028 Tryptophan synthase, alpha chain PJW08_12000 IPR011060 Ribulose-phosphate binding barrel PJW08_12005 IPR023026 Tryptophan synthase beta chain/beta chain-like PJW08_12005 IPR001926 Pyridoxal-phosphate dependent enzyme PJW08_12005 IPR006653 Tryptophan synthase, beta chain, conserved site PJW08_12005 IPR006654 Tryptophan synthase, beta chain PJW08_12005 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PJW08_12015 IPR013785 Aldolase-type TIM barrel PJW08_12015 IPR013798 Indole-3-glycerol phosphate synthase PJW08_12015 IPR001468 Indole-3-glycerol phosphate synthase, conserved site PJW08_12015 IPR011060 Ribulose-phosphate binding barrel PJW08_12030 IPR029062 Class I glutamine amidotransferase-like PJW08_12030 IPR017926 Glutamine amidotransferase PJW08_12030 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain PJW08_12040 IPR033738 Asparagine synthase, N-terminal domain PJW08_12040 IPR006426 Asparagine synthase, glutamine-hydrolyzing PJW08_12040 IPR029055 Nucleophile aminohydrolases, N-terminal PJW08_12040 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW08_12040 IPR017932 Glutamine amidotransferase type 2 domain PJW08_12040 IPR001962 Asparagine synthase PJW08_12090 IPR006679 Adenine deaminase PJW08_12090 IPR006680 Amidohydrolase-related PJW08_12090 IPR011059 Metal-dependent hydrolase, composite domain superfamily PJW08_12090 IPR032466 Metal-dependent hydrolase PJW08_12090 IPR026912 Adenine deaminase C-terminal domain PJW08_12100 IPR013324 RNA polymerase sigma factor, region 3/4-like PJW08_12100 IPR039425 RNA polymerase sigma-70 like PJW08_12100 IPR013325 RNA polymerase sigma factor, region 2 PJW08_12100 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 PJW08_12100 IPR036388 Winged helix-like DNA-binding domain superfamily PJW08_12100 IPR007627 RNA polymerase sigma-70 region 2 PJW08_12100 IPR014284 RNA polymerase sigma-70 like domain PJW08_12100 IPR014296 RNA polymerase sigma-M, bacillaceae PJW08_12100 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site PJW08_12115 IPR003453 ABC transport permease subunit MlaE, Proteobacteria PJW08_12115 IPR030802 ABC transporter permease MalE PJW08_12165 IPR038765 Papain-like cysteine peptidase superfamily PJW08_12165 IPR000064 Endopeptidase, NLPC/P60 domain PJW08_12185 IPR013740 Redoxin PJW08_12185 IPR036249 Thioredoxin-like superfamily PJW08_12185 IPR017937 Thioredoxin, conserved site PJW08_12185 IPR013766 Thioredoxin domain PJW08_12210 IPR007383 Protein of unknown function DUF445 PJW08_12215 IPR003594 Histidine kinase/HSP90-like ATPase PJW08_12215 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW08_12215 IPR005467 Histidine kinase domain PJW08_12215 IPR022066 Signal transduction histidine kinase, N-terminal PJW08_12215 IPR035965 PAS domain superfamily PJW08_12215 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain PJW08_12215 IPR038424 Signal transduction histidine kinase, N-terminal domain superfamily PJW08_12220 IPR039420 Transcriptional regulatory protein WalR-like PJW08_12220 IPR036388 Winged helix-like DNA-binding domain superfamily PJW08_12220 IPR001789 Signal transduction response regulator, receiver domain PJW08_12220 IPR001867 OmpR/PhoB-type DNA-binding domain PJW08_12220 IPR011006 CheY-like superfamily PJW08_12225 IPR011006 CheY-like superfamily PJW08_12225 IPR007492 LytTR DNA-binding domain PJW08_12225 IPR001789 Signal transduction response regulator, receiver domain PJW08_12230 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily PJW08_12230 IPR000755 D-alanyl-D-alanine dipeptidase PJW08_12245 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PJW08_12245 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily PJW08_12245 IPR036625 E3-binding domain superfamily PJW08_12245 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex PJW08_12245 IPR004167 Peripheral subunit-binding domain PJW08_12245 IPR011053 Single hybrid motif PJW08_12245 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain PJW08_12245 IPR000089 Biotin/lipoyl attachment PJW08_12325 IPR013704 Uncharacterised protein family UPF0313, N-terminal PJW08_12325 IPR024560 Uncharacterised protein family UPF0313, C-terminal PJW08_12325 IPR022946 Uncharacterised protein family UPF0313 PJW08_12325 IPR023404 Radical SAM, alpha/beta horseshoe PJW08_12325 IPR007197 Radical SAM PJW08_12325 IPR020612 Methylthiotransferase, conserved site PJW08_12325 IPR006638 Elp3/MiaB/NifB PJW08_12325 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PJW08_12365 IPR016181 Acyl-CoA N-acyltransferase PJW08_12365 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal PJW08_12365 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase PJW08_12410 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily PJW08_12410 IPR028624 Transcription elongation factor GreA/GreB PJW08_12410 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal PJW08_12410 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily PJW08_12410 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal PJW08_12410 IPR006359 Transcription elongation factor GreA PJW08_12410 IPR023459 Transcription elongation factor GreA/GreB family PJW08_12410 IPR018151 Transcription elongation factor, GreA/GreB, conserved site PJW08_12445 IPR035893 PurE domain superfamily PJW08_12445 IPR033747 Class I PurE PJW08_12445 IPR000031 PurE domain PJW08_12445 IPR024694 PurE, prokaryotic type PJW08_12465 IPR010917 TonB-dependent receptor, conserved site PJW08_12465 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW08_12465 IPR010101 TonB-dependent vitamin B12 transporter BtuB PJW08_12465 IPR000531 TonB-dependent receptor-like, beta-barrel PJW08_12465 IPR037066 TonB-dependent receptor, plug domain superfamily PJW08_12465 IPR012910 TonB-dependent receptor, plug domain PJW08_12465 IPR039426 Vitamin B12 transporter BtuB-like PJW08_12465 IPR010916 TonB box, conserved site PJW08_12535 IPR023034 Peptidyl-prolyl isomerase SurA PJW08_12535 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type PJW08_12535 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site PJW08_12535 IPR027304 Trigger factor/SurA domain superfamily PJW08_12535 IPR015391 SurA N-terminal PJW08_12580 IPR004619 Type III pantothenate kinase PJW08_12610 IPR011004 Trimeric LpxA-like superfamily PJW08_12610 IPR001451 Hexapeptide repeat PJW08_12620 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain PJW08_12620 IPR007921 CHAP domain PJW08_12620 IPR038765 Papain-like cysteine peptidase superfamily PJW08_12670 IPR016187 C-type lectin fold PJW08_12670 IPR005532 Sulfatase-modifying factor enzyme PJW08_12670 IPR042095 Sulfatase-modifying factor enzyme superfamily PJW08_12690 IPR029016 GAF-like domain superfamily PJW08_12690 IPR002197 DNA binding HTH domain, Fis-type PJW08_12690 IPR010113 Nif-specific regulatory protein PJW08_12690 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_12690 IPR002078 RNA polymerase sigma factor 54 interaction domain PJW08_12690 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PJW08_12690 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PJW08_12690 IPR025944 Sigma-54 interaction domain, conserved site PJW08_12690 IPR003018 GAF domain PJW08_12690 IPR003593 AAA+ ATPase domain PJW08_12705 IPR020818 GroES chaperonin family PJW08_12705 IPR037124 GroES chaperonin superfamily PJW08_12705 IPR018369 Chaperonin GroES, conserved site PJW08_12705 IPR011032 GroES-like superfamily PJW08_12715 IPR008949 Isoprenoid synthase domain superfamily PJW08_12715 IPR000092 Polyprenyl synthetase PJW08_12715 IPR033749 Polyprenyl synthetase, conserved site PJW08_12755 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG PJW08_12755 IPR036259 MFS transporter superfamily PJW08_12755 IPR020846 Major facilitator superfamily domain PJW08_12755 IPR011701 Major facilitator superfamily PJW08_12765 IPR034505 Anaerobic coproporphyrinogen-III oxidase PJW08_12765 IPR006638 Elp3/MiaB/NifB PJW08_12765 IPR010723 HemN, C-terminal PJW08_12765 IPR004559 Heme chaperone HemW-like PJW08_12765 IPR007197 Radical SAM PJW08_12765 IPR023404 Radical SAM, alpha/beta horseshoe PJW08_12770 IPR036397 Ribonuclease H superfamily PJW08_12770 IPR002176 Crossover junction endodeoxyribonuclease RuvC PJW08_12770 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site PJW08_12770 IPR012337 Ribonuclease H-like superfamily PJW08_12775 IPR006679 Adenine deaminase PJW08_12775 IPR026912 Adenine deaminase C-terminal domain PJW08_12775 IPR006680 Amidohydrolase-related PJW08_12775 IPR011059 Metal-dependent hydrolase, composite domain superfamily PJW08_12775 IPR032466 Metal-dependent hydrolase PJW08_12805 IPR002686 Transposase IS200-like PJW08_12805 IPR036515 Transposase IS200-like superfamily PJW08_12815 IPR003317 Cytochrome ubiquinol oxidase subunit 2 PJW08_12825 IPR029058 Alpha/Beta hydrolase fold PJW08_12825 IPR000073 Alpha/beta hydrolase fold-1 PJW08_12825 IPR019913 Pyrimidine utilisation protein RutD PJW08_12830 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PJW08_12830 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW08_12830 IPR007848 Methyltransferase small domain PJW08_12830 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase PJW08_12835 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal PJW08_12835 IPR006076 FAD dependent oxidoreductase PJW08_12835 IPR036188 FAD/NAD(P)-binding domain superfamily PJW08_12835 IPR008471 MnmC-like methyltransferase PJW08_12835 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC PJW08_12880 IPR016181 Acyl-CoA N-acyltransferase PJW08_12880 IPR029062 Class I glutamine amidotransferase-like PJW08_12880 IPR011257 DNA glycosylase PJW08_12880 IPR017926 Glutamine amidotransferase PJW08_12880 IPR001674 GMP synthase, C-terminal PJW08_12880 IPR025777 GMP synthetase ATP pyrophosphatase domain PJW08_12880 IPR000182 GNAT domain PJW08_12880 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW08_12880 IPR005019 Methyladenine glycosylase PJW08_12885 IPR029045 ClpP/crotonase-like domain superfamily PJW08_12885 IPR004634 Peptidase S49, protease IV PJW08_12885 IPR004635 Peptidase S49, SppA PJW08_12885 IPR002142 Peptidase S49 PJW08_12885 IPR033854 Signal peptide peptidase A PJW08_12890 IPR002133 S-adenosylmethionine synthetase PJW08_12890 IPR022636 S-adenosylmethionine synthetase superfamily PJW08_12890 IPR022629 S-adenosylmethionine synthetase, central domain PJW08_12890 IPR022628 S-adenosylmethionine synthetase, N-terminal PJW08_12890 IPR022631 S-adenosylmethionine synthetase, conserved site PJW08_12890 IPR022630 S-adenosylmethionine synthetase, C-terminal PJW08_12895 IPR013766 Thioredoxin domain PJW08_12895 IPR017937 Thioredoxin, conserved site PJW08_12895 IPR036249 Thioredoxin-like superfamily PJW08_12895 IPR005746 Thioredoxin PJW08_12945 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily PJW08_12945 IPR019814 Translation initiation factor 3, N-terminal PJW08_12945 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily PJW08_12945 IPR019815 Translation initiation factor 3, C-terminal PJW08_12945 IPR001288 Translation initiation factor 3 PJW08_12950 IPR021137 Ribosomal protein L35 PJW08_12950 IPR018265 Ribosomal protein L35, conserved site PJW08_12950 IPR001706 Ribosomal protein L35, non-mitochondrial PJW08_12950 IPR037229 Ribosomal protein L35 superfamily PJW08_12980 IPR005225 Small GTP-binding protein domain PJW08_12980 IPR006073 GTP binding domain PJW08_12980 IPR036726 GTP1/OBG domain superfamily PJW08_12980 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_12980 IPR006074 GTP1/OBG, conserved site PJW08_12980 IPR014100 GTP-binding protein Obg/CgtA PJW08_12980 IPR035101 GTP-binding protein, Obg-type PJW08_12980 IPR006169 GTP1/OBG domain PJW08_12980 IPR031167 OBG-type guanine nucleotide-binding (G) domain PJW08_12990 IPR038765 Papain-like cysteine peptidase superfamily PJW08_12990 IPR000064 Endopeptidase, NLPC/P60 domain PJW08_12995 IPR003835 Glycosyl transferase, family 19 PJW08_13000 IPR030048 Survival protein SurE PJW08_13000 IPR002828 Survival protein SurE-like phosphatase/nucleotidase PJW08_13000 IPR036523 SurE-like phosphatase/nucleotidase superfamily PJW08_13005 IPR001478 PDZ domain PJW08_13005 IPR036034 PDZ superfamily PJW08_13005 IPR004447 C-terminal-processing peptidase S41A PJW08_13005 IPR005151 Tail specific protease PJW08_13005 IPR020992 Tail specific protease, C-terminal PJW08_13005 IPR040573 Tail specific protease, N-terminal domain PJW08_13005 IPR029045 ClpP/crotonase-like domain superfamily PJW08_13045 IPR035681 ComA-like, MBL domain PJW08_13045 IPR004477 ComEC/Rec2-related protein PJW08_13045 IPR025405 Domain of unknown function DUF4131 PJW08_13045 IPR001279 Metallo-beta-lactamase PJW08_13045 IPR004797 Competence protein ComEC/Rec2 PJW08_13045 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PJW08_13105 IPR000531 TonB-dependent receptor-like, beta-barrel PJW08_13105 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site PJW08_13105 IPR023996 TonB-dependent outer membrane protein, SusC/RagA PJW08_13105 IPR037066 TonB-dependent receptor, plug domain superfamily PJW08_13105 IPR008969 Carboxypeptidase-like, regulatory domain superfamily PJW08_13105 IPR012910 TonB-dependent receptor, plug domain PJW08_13110 IPR008969 Carboxypeptidase-like, regulatory domain superfamily PJW08_13110 IPR000531 TonB-dependent receptor-like, beta-barrel PJW08_13110 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site PJW08_13110 IPR023996 TonB-dependent outer membrane protein, SusC/RagA PJW08_13110 IPR037066 TonB-dependent receptor, plug domain superfamily PJW08_13110 IPR012910 TonB-dependent receptor, plug domain PJW08_13170 IPR016193 Cytidine deaminase-like PJW08_13170 IPR011607 Methylglyoxal synthase-like domain PJW08_13170 IPR036914 Methylglyoxal synthase-like domain superfamily PJW08_13170 IPR002695 Bifunctional purine biosynthesis protein PurH-like PJW08_13170 IPR024051 AICAR transformylase, duplicated domain superfamily PJW08_13175 IPR004753 Cell shape determining protein MreB PJW08_13180 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 PJW08_13180 IPR007221 Rod shape-determining protein MreC PJW08_13180 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 PJW08_13195 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site PJW08_13195 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA PJW08_13195 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB PJW08_13245 IPR000092 Polyprenyl synthetase PJW08_13245 IPR033749 Polyprenyl synthetase, conserved site PJW08_13245 IPR008949 Isoprenoid synthase domain superfamily PJW08_13265 IPR003591 Leucine-rich repeat, typical subtype PJW08_13265 IPR036597 Fido-like domain superfamily PJW08_13265 IPR003812 Fido domain PJW08_13265 IPR032675 Leucine-rich repeat domain superfamily PJW08_13270 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily PJW08_13270 IPR017938 Riboflavin synthase-like beta-barrel PJW08_13270 IPR001783 Lumazine-binding protein PJW08_13270 IPR026017 Lumazine-binding domain PJW08_13275 IPR005255 PdxA family PJW08_13290 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 PJW08_13290 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PJW08_13290 IPR016039 Thiolase-like PJW08_13290 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal PJW08_13295 IPR011053 Single hybrid motif PJW08_13295 IPR000089 Biotin/lipoyl attachment PJW08_13295 IPR001882 Biotin-binding site PJW08_13295 IPR001249 Acetyl-CoA biotin carboxyl carrier PJW08_13365 IPR039418 LexA-like PJW08_13365 IPR015927 Peptidase S24/S26A/S26B/S26C PJW08_13365 IPR036286 LexA/Signal peptidase-like superfamily PJW08_13365 IPR006197 Peptidase S24, LexA-like PJW08_13370 IPR001387 Cro/C1-type helix-turn-helix domain PJW08_13370 IPR010982 Lambda repressor-like, DNA-binding domain superfamily PJW08_13380 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PJW08_13380 IPR011991 ArsR-like helix-turn-helix domain PJW08_13380 IPR000485 AsnC-type HTH domain PJW08_13380 IPR011008 Dimeric alpha-beta barrel PJW08_13380 IPR019888 Transcription regulator AsnC-type PJW08_13380 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PJW08_13380 IPR036388 Winged helix-like DNA-binding domain superfamily PJW08_13380 IPR036390 Winged helix DNA-binding domain superfamily PJW08_13395 IPR001478 PDZ domain PJW08_13395 IPR005151 Tail specific protease PJW08_13395 IPR041489 PDZ domain 6 PJW08_13395 IPR036034 PDZ superfamily PJW08_13395 IPR004447 C-terminal-processing peptidase S41A PJW08_13395 IPR002477 Peptidoglycan binding-like PJW08_13395 IPR036365 PGBD-like superfamily PJW08_13395 IPR036366 PGBD superfamily PJW08_13395 IPR029045 ClpP/crotonase-like domain superfamily PJW08_13400 IPR011006 CheY-like superfamily PJW08_13400 IPR007492 LytTR DNA-binding domain PJW08_13400 IPR001789 Signal transduction response regulator, receiver domain PJW08_13410 IPR005467 Histidine kinase domain PJW08_13410 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain PJW08_13410 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily PJW08_13410 IPR011649 KaiB domain PJW08_13410 IPR023527 Adaptive-response sensory-kinase SasA PJW08_13410 IPR003594 Histidine kinase/HSP90-like ATPase PJW08_13410 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PJW08_13410 IPR036249 Thioredoxin-like superfamily PJW08_13410 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PJW08_13425 IPR004821 Cytidyltransferase-like domain PJW08_13425 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase PJW08_13425 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW08_13430 IPR017665 Guanylate kinase PJW08_13430 IPR020590 Guanylate kinase, conserved site PJW08_13430 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_13430 IPR008145 Guanylate kinase/L-type calcium channel beta subunit PJW08_13430 IPR008144 Guanylate kinase-like domain PJW08_13435 IPR005229 Conserved hypothetical protein CHP00255 PJW08_13435 IPR013551 Domain of unknown function DUF1732 PJW08_13435 IPR013527 YicC-like, N-terminal PJW08_13450 IPR010918 PurM-like, C-terminal domain PJW08_13450 IPR036676 PurM-like, C-terminal domain superfamily PJW08_13450 IPR016188 PurM-like, N-terminal domain PJW08_13450 IPR036921 PurM-like, N-terminal domain superfamily PJW08_13450 IPR006283 Thiamine-monophosphate kinase PJW08_13460 IPR017870 FeS cluster insertion, C-terminal, conserved site PJW08_13460 IPR016092 FeS cluster insertion protein PJW08_13460 IPR035903 HesB-like domain superfamily PJW08_13460 IPR000361 FeS cluster biogenesis PJW08_13470 IPR003439 ABC transporter-like PJW08_13470 IPR017871 ABC transporter, conserved site PJW08_13470 IPR010230 FeS cluster assembly SUF system, ATPase SufC PJW08_13470 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_13475 IPR000825 SUF system FeS cluster assembly, SufBD PJW08_13475 IPR037284 SUF system FeS cluster assembly, SufBD superfamily PJW08_13475 IPR011542 SUF system FeS cluster assembly, SufD PJW08_13495 IPR035906 MetI-like superfamily PJW08_13495 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PJW08_13495 IPR000515 ABC transporter type 1, transmembrane domain MetI-like PJW08_13500 IPR011066 Mechanosensitive ion channel MscS, C-terminal PJW08_13500 IPR006685 Mechanosensitive ion channel MscS PJW08_13500 IPR010920 LSM domain superfamily PJW08_13500 IPR030192 Miniconductance mechanosensitive channel YbdG PJW08_13505 IPR001227 Acyl transferase domain superfamily PJW08_13505 IPR014043 Acyl transferase PJW08_13505 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase PJW08_13505 IPR024925 Malonyl CoA-acyl carrier protein transacylase PJW08_13505 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type PJW08_13505 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding PJW08_13515 IPR016040 NAD(P)-binding domain PJW08_13515 IPR036291 NAD(P)-binding domain superfamily PJW08_13515 IPR005886 UDP-glucose 4-epimerase PJW08_13540 IPR001352 Ribonuclease HII/HIII PJW08_13540 IPR024567 Ribonuclease HII/HIII domain PJW08_13540 IPR012337 Ribonuclease H-like superfamily PJW08_13540 IPR036397 Ribonuclease H superfamily PJW08_13540 IPR022898 Ribonuclease HII PJW08_13550 IPR004624 PhnA protein PJW08_13550 IPR013988 PhnA protein, C-terminal PJW08_13550 IPR013987 PhnA protein, N-terminal PJW08_13555 IPR009000 Translation protein, beta-barrel domain superfamily PJW08_13555 IPR011961 16S rRNA processing protein RimM PJW08_13555 IPR011033 PRC-barrel-like superfamily PJW08_13555 IPR036976 RimM, N-terminal domain superfamily PJW08_13555 IPR002676 RimM, N-terminal PJW08_13560 IPR000307 Ribosomal protein S16 PJW08_13560 IPR023803 Ribosomal protein S16 domain superfamily PJW08_13565 IPR012156 Cold shock, CspA PJW08_13565 IPR011129 Cold shock domain PJW08_13565 IPR019844 Cold-shock (CSD) domain PJW08_13565 IPR002059 Cold-shock protein, DNA-binding PJW08_13565 IPR012340 Nucleic acid-binding, OB-fold PJW08_13600 IPR011335 Restriction endonuclease type II-like PJW08_13600 IPR011856 tRNA endonuclease-like domain superfamily PJW08_13600 IPR003509 Uncharacterised protein family UPF0102 PJW08_13605 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily PJW08_13605 IPR029062 Class I glutamine amidotransferase-like PJW08_13605 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal PJW08_13605 IPR040449 LD-carboxypeptidase, N-terminal PJW08_13605 IPR040921 LD-carboxypeptidase, C-terminal PJW08_13605 IPR003507 Peptidase family S66 PJW08_13615 IPR012910 TonB-dependent receptor, plug domain PJW08_13615 IPR037066 TonB-dependent receptor, plug domain superfamily PJW08_13615 IPR011662 Secretin/TonB, short N-terminal domain PJW08_13615 IPR039423 TonB-dependent receptor-like PJW08_13615 IPR000531 TonB-dependent receptor-like, beta-barrel PJW08_13615 IPR010916 TonB box, conserved site PJW08_13615 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW08_13615 IPR010917 TonB-dependent receptor, conserved site PJW08_13615 IPR010105 TonB-dependent siderophore receptor PJW08_13630 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PJW08_13630 IPR019264 Domain of unknown function DUF2179 PJW08_13630 IPR003740 Uncharacterised membrane protein YitT PJW08_13660 IPR036389 Ribonuclease III, endonuclease domain superfamily PJW08_13660 IPR000999 Ribonuclease III domain PJW08_13660 IPR011907 Ribonuclease III PJW08_13660 IPR014720 Double-stranded RNA-binding domain PJW08_13675 IPR002376 Formyl transferase, N-terminal PJW08_13675 IPR036477 Formyl transferase, N-terminal domain superfamily PJW08_13675 IPR004607 Phosphoribosylglycinamide formyltransferase PJW08_13680 IPR011320 Ribonuclease H1, N-terminal PJW08_13680 IPR037056 Ribonuclease H1, N-terminal domain superfamily PJW08_13680 IPR017290 Ribonuclease H, Bacteroides-type PJW08_13680 IPR012337 Ribonuclease H-like superfamily PJW08_13680 IPR036397 Ribonuclease H superfamily PJW08_13680 IPR009027 Ribosomal protein L9/RNase H1, N-terminal PJW08_13695 IPR010920 LSM domain superfamily PJW08_13695 IPR006685 Mechanosensitive ion channel MscS PJW08_13695 IPR011066 Mechanosensitive ion channel MscS, C-terminal PJW08_13695 IPR006686 Mechanosensitive ion channel MscS, conserved site PJW08_13695 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 PJW08_13695 IPR023408 Mechanosensitive ion channel MscS domain superfamily PJW08_13695 IPR008910 Conserved TM helix PJW08_13700 IPR000905 Gcp-like domain PJW08_13700 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB PJW08_13715 IPR007352 Protein of unknown function DUF420 PJW08_13720 IPR013766 Thioredoxin domain PJW08_13720 IPR036249 Thioredoxin-like superfamily PJW08_13720 IPR003782 Copper chaperone SCO1/SenC PJW08_13735 IPR033945 Cytochrome c oxidase subunit III domain PJW08_13735 IPR000298 Cytochrome c oxidase subunit III-like PJW08_13735 IPR035973 Cytochrome c oxidase subunit III-like superfamily PJW08_13735 IPR024791 Cytochrome c oxidase subunit III PJW08_13735 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle PJW08_13740 IPR024791 Cytochrome c oxidase subunit III PJW08_13740 IPR033945 Cytochrome c oxidase subunit III domain PJW08_13740 IPR000298 Cytochrome c oxidase subunit III-like PJW08_13740 IPR035973 Cytochrome c oxidase subunit III-like superfamily PJW08_13740 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle PJW08_13775 IPR000845 Nucleoside phosphorylase domain PJW08_13775 IPR018099 Purine phosphorylase, family 2, conserved site PJW08_13775 IPR011268 Purine nucleoside phosphorylase PJW08_13775 IPR035994 Nucleoside phosphorylase superfamily PJW08_13775 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific PJW08_13795 IPR012259 Dihydrofolate reductase PJW08_13795 IPR024072 Dihydrofolate reductase-like domain superfamily PJW08_13795 IPR017925 Dihydrofolate reductase conserved site PJW08_13795 IPR001796 Dihydrofolate reductase domain PJW08_13825 IPR033248 Transketolase, C-terminal domain PJW08_13825 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PJW08_13825 IPR000089 Biotin/lipoyl attachment PJW08_13825 IPR027110 Pyruvate dehydrogenase E1 component subunit beta PJW08_13825 IPR011053 Single hybrid motif PJW08_13825 IPR029061 Thiamin diphosphate-binding fold PJW08_13825 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II PJW08_13825 IPR005475 Transketolase-like, pyrimidine-binding domain PJW08_13840 IPR036649 Inorganic pyrophosphatase superfamily PJW08_13840 IPR008162 Inorganic pyrophosphatase PJW08_13845 IPR005802 Aminodeoxychorismate synthase, component I PJW08_13845 IPR005801 ADC synthase PJW08_13845 IPR019999 Anthranilate synthase component I-like PJW08_13845 IPR006805 Anthranilate synthase component I, N-terminal PJW08_13845 IPR015890 Chorismate-utilising enzyme, C-terminal PJW08_13875 IPR020568 Ribosomal protein S5 domain 2-type fold PJW08_13875 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PJW08_13875 IPR003593 AAA+ ATPase domain PJW08_13875 IPR001208 MCM domain PJW08_13875 IPR004482 Mg chelatase-related protein PJW08_13875 IPR025158 Mg chelatase-related protein, C-terminal domain PJW08_13875 IPR000523 Magnesium chelatase ChlI domain PJW08_13875 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_13880 IPR013766 Thioredoxin domain PJW08_13880 IPR013740 Redoxin PJW08_13880 IPR036249 Thioredoxin-like superfamily PJW08_13880 IPR017937 Thioredoxin, conserved site PJW08_13890 IPR041719 Ferritin, prokaryotic-type PJW08_13890 IPR008331 Ferritin/DPS protein domain PJW08_13890 IPR012347 Ferritin-like PJW08_13890 IPR009040 Ferritin-like diiron domain PJW08_13890 IPR009078 Ferritin-like superfamily PJW08_13890 IPR001519 Ferritin PJW08_13935 IPR004504 DNA repair protein RadA PJW08_13935 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_13935 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain PJW08_13935 IPR020568 Ribosomal protein S5 domain 2-type fold PJW08_13935 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PJW08_13935 IPR041166 LapB, rubredoxin metal binding domain PJW08_13935 IPR003593 AAA+ ATPase domain PJW08_13945 IPR009010 Aspartate decarboxylase-like domain superfamily PJW08_13945 IPR003190 Aspartate decarboxylase PJW08_13955 IPR011835 Bacterial/plant glycogen synthase PJW08_13955 IPR001296 Glycosyl transferase, family 1 PJW08_13955 IPR013534 Starch synthase, catalytic domain PJW08_14000 IPR001463 Sodium:alanine symporter PJW08_14030 IPR001387 Cro/C1-type helix-turn-helix domain PJW08_14030 IPR010982 Lambda repressor-like, DNA-binding domain superfamily PJW08_14095 IPR003593 AAA+ ATPase domain PJW08_14095 IPR041627 CbbX, AAA lid domain PJW08_14095 IPR003959 ATPase, AAA-type, core PJW08_14095 IPR000641 CbxX/CfxQ PJW08_14095 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_14095 IPR014232 Sporulation stage V, protein K PJW08_14100 IPR003439 ABC transporter-like PJW08_14100 IPR017871 ABC transporter, conserved site PJW08_14100 IPR015859 ABC transporter, taurine import, TauD PJW08_14100 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_14100 IPR003593 AAA+ ATPase domain PJW08_14150 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily PJW08_14150 IPR030395 Glycerophosphodiester phosphodiesterase domain PJW08_14155 IPR018385 C4-dicarboxylate anaerobic carrier-like PJW08_14165 IPR000192 Aminotransferase class V domain PJW08_14165 IPR016454 Cysteine desulfurase PJW08_14165 IPR015424 Pyridoxal phosphate-dependent transferase PJW08_14165 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 PJW08_14165 IPR015421 Pyridoxal phosphate-dependent transferase, major domain PJW08_14165 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site PJW08_14165 IPR010970 Cysteine desulfurase, SufS PJW08_14200 IPR002912 ACT domain PJW08_14200 IPR036393 Acetylglutamate kinase-like superfamily PJW08_14200 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain PJW08_14200 IPR001048 Aspartate/glutamate/uridylate kinase PJW08_14200 IPR005260 Aspartate kinase, monofunctional class PJW08_14200 IPR001341 Aspartate kinase PJW08_14200 IPR018042 Aspartate kinase, conserved site PJW08_14215 IPR001189 Manganese/iron superoxide dismutase PJW08_14215 IPR019833 Manganese/iron superoxide dismutase, binding site PJW08_14215 IPR019832 Manganese/iron superoxide dismutase, C-terminal PJW08_14215 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily PJW08_14215 IPR019831 Manganese/iron superoxide dismutase, N-terminal PJW08_14215 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily PJW08_14255 IPR036188 FAD/NAD(P)-binding domain superfamily PJW08_14255 IPR023753 FAD/NAD(P)-binding domain PJW08_14255 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site PJW08_14255 IPR005982 Thioredoxin reductase PJW08_14255 IPR005746 Thioredoxin PJW08_14255 IPR036249 Thioredoxin-like superfamily PJW08_14255 IPR017937 Thioredoxin, conserved site PJW08_14255 IPR013766 Thioredoxin domain PJW08_14295 IPR005222 Competence protein ComF PJW08_14295 IPR000836 Phosphoribosyltransferase domain PJW08_14295 IPR029057 Phosphoribosyltransferase-like PJW08_14300 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm PJW08_14300 IPR023165 rRNA adenine dimethylase-like PJW08_14300 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site PJW08_14300 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal PJW08_14300 IPR011530 Ribosomal RNA adenine dimethylase PJW08_14300 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW08_14320 IPR002315 Glycyl-tRNA synthetase PJW08_14320 IPR033731 Glycyl-tRNA synthetase-like core domain PJW08_14320 IPR022961 Glycine-tRNA ligase, bacterial PJW08_14320 IPR027031 Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 PJW08_14320 IPR036621 Anticodon-binding domain superfamily PJW08_14320 IPR004154 Anticodon-binding PJW08_14320 IPR006195 Aminoacyl-tRNA synthetase, class II PJW08_14340 IPR023845 Domain of unknown function DUF3817, transmembrane PJW08_14345 IPR000531 TonB-dependent receptor-like, beta-barrel PJW08_14345 IPR039426 Vitamin B12 transporter BtuB-like PJW08_14345 IPR012910 TonB-dependent receptor, plug domain PJW08_14345 IPR037066 TonB-dependent receptor, plug domain superfamily PJW08_14345 IPR010916 TonB box, conserved site PJW08_14345 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW08_14345 IPR010917 TonB-dependent receptor, conserved site PJW08_14345 IPR010101 TonB-dependent vitamin B12 transporter BtuB PJW08_14380 IPR011547 SLC26A/SulP transporter domain PJW08_14380 IPR002645 STAS domain PJW08_14380 IPR001902 SLC26A/SulP transporter PJW08_14380 IPR036513 STAS domain superfamily PJW08_14385 IPR003593 AAA+ ATPase domain PJW08_14385 IPR041445 RuvB, AAA lid domain PJW08_14385 IPR004605 DNA helicase, Holliday junction RuvB-type PJW08_14385 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_14385 IPR008824 RuvB-like P-loop domain PJW08_14385 IPR008823 RuvB C-terminal winged helix domain PJW08_14385 IPR036388 Winged helix-like DNA-binding domain superfamily PJW08_14385 IPR036390 Winged helix DNA-binding domain superfamily PJW08_14395 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily PJW08_14395 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain PJW08_14395 IPR002429 Cytochrome c oxidase subunit II-like C-terminal PJW08_14395 IPR008972 Cupredoxin PJW08_14395 IPR001505 Copper centre Cu(A) PJW08_14395 IPR034210 Cytochrome c oxidase subunit 2, C-terminal PJW08_14395 IPR014222 Cytochrome c oxidase, subunit II PJW08_14395 IPR005728 Rickettsial palindromic element PJW08_14425 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PJW08_14425 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PJW08_14450 IPR000644 CBS domain PJW08_14450 IPR002550 CNNM, transmembrane domain PJW08_14470 IPR034904 Fe-S cluster assembly domain superfamily PJW08_14470 IPR002744 MIP18 family-like PJW08_14475 IPR003808 Fe-S metabolism associated domain, SufE-like PJW08_14485 IPR017932 Glutamine amidotransferase type 2 domain PJW08_14485 IPR029055 Nucleophile aminohydrolases, N-terminal PJW08_14485 IPR000836 Phosphoribosyltransferase domain PJW08_14485 IPR029057 Phosphoribosyltransferase-like PJW08_14485 IPR005854 Amidophosphoribosyltransferase PJW08_14485 IPR035584 Amidophosphoribosyltransferase, N-terminal PJW08_14520 IPR012910 TonB-dependent receptor, plug domain PJW08_14520 IPR037066 TonB-dependent receptor, plug domain superfamily PJW08_14520 IPR000531 TonB-dependent receptor-like, beta-barrel PJW08_14520 IPR011276 TonB-dependent haem/haemoglobin receptor PJW08_14520 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor PJW08_14520 IPR010917 TonB-dependent receptor, conserved site PJW08_14520 IPR039426 Vitamin B12 transporter BtuB-like PJW08_14535 IPR037682 TonB, C-terminal PJW08_14535 IPR003538 Gram-negative bacterial TonB protein PJW08_14535 IPR006260 TonB/TolA, C-terminal PJW08_14550 IPR028622 ATP-dependent RNA helicase RhlE PJW08_14550 IPR014014 RNA helicase, DEAD-box type, Q motif PJW08_14550 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PJW08_14550 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_14550 IPR001650 Helicase, C-terminal PJW08_14550 IPR011545 DEAD/DEAH box helicase domain PJW08_14550 IPR014001 Helicase superfamily 1/2, ATP-binding domain PJW08_14555 IPR012675 Beta-grasp domain superfamily PJW08_14555 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain PJW08_14555 IPR017927 FAD-binding domain, ferredoxin reductase-type PJW08_14555 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PJW08_14555 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F PJW08_14555 IPR001433 Oxidoreductase FAD/NAD(P)-binding PJW08_14555 IPR017938 Riboflavin synthase-like beta-barrel PJW08_14555 IPR036010 2Fe-2S ferredoxin-like superfamily PJW08_14555 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain PJW08_14565 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D PJW08_14565 IPR003667 NqrDE/RnfAE PJW08_14570 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C PJW08_14570 IPR007329 FMN-binding PJW08_14580 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain PJW08_14580 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A PJW08_14590 IPR023065 Uncharacterised protein family ApaG PJW08_14590 IPR036767 ApaG domain superfamily PJW08_14590 IPR007474 ApaG domain PJW08_14630 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW08_14630 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site PJW08_14630 IPR001525 C-5 cytosine methyltransferase PJW08_14630 IPR018117 DNA methylase, C-5 cytosine-specific, active site PJW08_14660 IPR001650 Helicase, C-terminal PJW08_14660 IPR014001 Helicase superfamily 1/2, ATP-binding domain PJW08_14660 IPR011545 DEAD/DEAH box helicase domain PJW08_14660 IPR028622 ATP-dependent RNA helicase RhlE PJW08_14660 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_14660 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PJW08_14660 IPR014014 RNA helicase, DEAD-box type, Q motif PJW08_14665 IPR005624 Haem-degrading PJW08_14665 IPR038084 GlcG-like domain superfamily PJW08_14675 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW08_14675 IPR003682 rRNA small subunit methyltransferase G PJW08_14700 IPR001130 TatD family PJW08_14700 IPR032466 Metal-dependent hydrolase PJW08_14700 IPR015991 Uncharacterised hydrolase TatD-type PJW08_14700 IPR018228 Deoxyribonuclease, TatD-related, conserved site PJW08_14705 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding PJW08_14705 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain PJW08_14705 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain PJW08_14705 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily PJW08_14705 IPR036388 Winged helix-like DNA-binding domain superfamily PJW08_14705 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site PJW08_14705 IPR023546 Methylated-DNA--protein-cysteine methyltransferase PJW08_14710 IPR016192 APOBEC/CMP deaminase, zinc-binding PJW08_14710 IPR002125 Cytidine and deoxycytidylate deaminase domain PJW08_14710 IPR028883 tRNA-specific adenosine deaminase PJW08_14710 IPR016193 Cytidine deaminase-like PJW08_14720 IPR010101 TonB-dependent vitamin B12 transporter BtuB PJW08_14720 IPR039426 Vitamin B12 transporter BtuB-like PJW08_14720 IPR037066 TonB-dependent receptor, plug domain superfamily PJW08_14720 IPR000531 TonB-dependent receptor-like, beta-barrel PJW08_14720 IPR010916 TonB box, conserved site PJW08_14720 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PJW08_14720 IPR010917 TonB-dependent receptor, conserved site PJW08_14720 IPR012910 TonB-dependent receptor, plug domain PJW08_14730 IPR002881 Domain of unknown function DUF58 PJW08_14730 IPR036465 von Willebrand factor A-like domain superfamily PJW08_14745 IPR024163 Aerotolerance regulator, N-terminal PJW08_14745 IPR002035 von Willebrand factor, type A PJW08_14745 IPR036465 von Willebrand factor A-like domain superfamily PJW08_14745 IPR022933 Uncharacterised protein family UPF0353 PJW08_14785 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PJW08_14785 IPR023465 Riboflavin kinase domain superfamily PJW08_14785 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic PJW08_14785 IPR002606 Riboflavin kinase, bacterial PJW08_14785 IPR023468 Riboflavin kinase PJW08_14785 IPR015864 FAD synthetase PJW08_14810 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PJW08_14810 IPR023165 rRNA adenine dimethylase-like PJW08_14810 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm PJW08_14810 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal PJW08_14810 IPR011530 Ribosomal RNA adenine dimethylase PJW08_14825 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site PJW08_14825 IPR012675 Beta-grasp domain superfamily PJW08_14825 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain PJW08_14825 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase PJW08_14825 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PJW08_14825 IPR001433 Oxidoreductase FAD/NAD(P)-binding PJW08_14825 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit PJW08_14825 IPR017938 Riboflavin synthase-like beta-barrel PJW08_14825 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain PJW08_14825 IPR036010 2Fe-2S ferredoxin-like superfamily PJW08_14825 IPR017927 FAD-binding domain, ferredoxin reductase-type PJW08_14845 IPR005474 Transketolase, N-terminal PJW08_14845 IPR033248 Transketolase, C-terminal domain PJW08_14845 IPR020826 Transketolase binding site PJW08_14845 IPR005475 Transketolase-like, pyrimidine-binding domain PJW08_14845 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II PJW08_14845 IPR029061 Thiamin diphosphate-binding fold PJW08_14845 IPR005477 Deoxyxylulose-5-phosphate synthase PJW08_14850 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site PJW08_14850 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily PJW08_14850 IPR000131 ATP synthase, F1 complex, gamma subunit PJW08_14860 IPR020781 ATPase, OSCP/delta subunit, conserved site PJW08_14860 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily PJW08_14860 IPR000711 ATPase, OSCP/delta subunit PJW08_14865 IPR005864 ATP synthase, F0 complex, subunit b, bacterial PJW08_14865 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast PJW08_14865 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily PJW08_14905 IPR000064 Endopeptidase, NLPC/P60 domain PJW08_14905 IPR036779 LysM domain superfamily PJW08_14905 IPR018392 LysM domain PJW08_14905 IPR038765 Papain-like cysteine peptidase superfamily PJW08_14910 IPR004808 AP endonuclease 1 PJW08_14910 IPR020847 AP endonuclease 1, binding site PJW08_14910 IPR005135 Endonuclease/exonuclease/phosphatase PJW08_14910 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PJW08_14910 IPR020848 AP endonuclease 1, conserved site PJW08_14920 IPR012791 3-oxoacid CoA-transferase, subunit B PJW08_14920 IPR004165 Coenzyme A transferase family I PJW08_14920 IPR004164 Coenzyme A transferase active site PJW08_14920 IPR037171 NagB/RpiA transferase-like PJW08_14925 IPR012792 3-oxoacid CoA-transferase, subunit A PJW08_14925 IPR004165 Coenzyme A transferase family I PJW08_14925 IPR004163 Coenzyme A transferase binding site PJW08_14925 IPR037171 NagB/RpiA transferase-like PJW08_14935 IPR020018 Gliding motility-associated lipoprotein, GldH PJW08_14975 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PJW08_14975 IPR014014 RNA helicase, DEAD-box type, Q motif PJW08_14975 IPR011545 DEAD/DEAH box helicase domain PJW08_14975 IPR028622 ATP-dependent RNA helicase RhlE PJW08_14975 IPR014001 Helicase superfamily 1/2, ATP-binding domain PJW08_14975 IPR001650 Helicase, C-terminal PJW08_14975 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_14985 IPR013651 ATP-grasp fold, RimK-type PJW08_14985 IPR011761 ATP-grasp fold PJW08_14985 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX PJW08_14985 IPR013815 ATP-grasp fold, subdomain 1 PJW08_14985 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK PJW08_14985 IPR041107 RimK, PreATP-grasp domain PJW08_14990 IPR006157 Dihydroneopterin aldolase/epimerase domain PJW08_14990 IPR006156 Dihydroneopterin aldolase PJW08_15010 IPR001279 Metallo-beta-lactamase PJW08_15010 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PJW08_15050 IPR007346 Endonuclease I PJW08_15055 IPR012189 Peptidase M28E, aminopeptidase AP1 PJW08_15055 IPR007280 Peptidase, C-terminal, archaeal/bacterial PJW08_15055 IPR007484 Peptidase M28 PJW08_15085 IPR036249 Thioredoxin-like superfamily PJW08_15085 IPR013766 Thioredoxin domain PJW08_15085 IPR005746 Thioredoxin PJW08_15085 IPR017937 Thioredoxin, conserved site PJW08_15095 IPR003593 AAA+ ATPase domain PJW08_15095 IPR003439 ABC transporter-like PJW08_15095 IPR017871 ABC transporter, conserved site PJW08_15095 IPR008995 Molybdate/tungstate binding, C-terminal PJW08_15095 IPR027417 P-loop containing nucleoside triphosphate hydrolase PJW08_15095 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit PJW08_15095 IPR013611 Transport-associated OB, type 2 PJW08_15100 IPR023375 Acetoacetate decarboxylase domain superfamily PJW08_15100 IPR018644 Protein of unknown function DUF2071 PJW08_15180 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal PJW08_15180 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal PJW08_15180 IPR036291 NAD(P)-binding domain superfamily PJW08_15180 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily PJW08_15180 IPR013328 6-phosphogluconate dehydrogenase, domain 2 PJW08_15180 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent PJW08_15220 IPR001789 Signal transduction response regulator, receiver domain PJW08_15220 IPR011006 CheY-like superfamily PJW08_15220 IPR007492 LytTR DNA-binding domain PJW08_15235 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain PJW08_15235 IPR020103 Pseudouridine synthase, catalytic domain superfamily PJW08_15235 IPR006145 Pseudouridine synthase, RsuA/RluA PJW08_15235 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F PJW08_15235 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site PJW08_15245 IPR016181 Acyl-CoA N-acyltransferase PJW08_15245 IPR000182 GNAT domain PJW08_15250 IPR004785 Ribose 5-phosphate isomerase B PJW08_15250 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family PJW08_15250 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily