locus-tag class description PJW08_00210 PF03527 RHS protein PJW08_00210 PF05593 RHS Repeat PJW08_00225 PF05593 RHS Repeat PJW08_00225 PF05488 PAAR motif PJW08_00235 PF05593 RHS Repeat PJW08_00235 PF05488 PAAR motif PJW08_00245 PF05488 PAAR motif PJW08_00245 PF05593 RHS Repeat PJW08_00255 PF05593 RHS Repeat PJW08_00255 PF03527 RHS protein PJW08_00265 PF05593 RHS Repeat PJW08_00265 PF03527 RHS protein PJW08_00275 PF03527 RHS protein PJW08_00275 PF05593 RHS Repeat PJW08_00525 PF02899 Phage integrase, N-terminal SAM-like domain PJW08_00525 PF00589 Phage integrase family PJW08_00570 PF00589 Phage integrase family PJW08_00570 PF02899 Phage integrase, N-terminal SAM-like domain PJW08_00645 PF01609 Transposase DDE domain PJW08_00645 PF13808 DDE_Tnp_1-associated PJW08_00730 PF13614 AAA domain PJW08_00815 PF02416 mttA/Hcf106 family PJW08_00825 PF01145 SPFH domain / Band 7 family PJW08_00845 PF02130 Uncharacterized protein family UPF0054 PJW08_00855 PF00749 tRNA synthetases class I (E and Q), catalytic domain PJW08_00880 PF00149 Calcineurin-like phosphoesterase PJW08_00880 PF12320 Type 5 capsule protein repressor C-terminal domain PJW08_00885 PF13476 AAA domain PJW08_00920 PF02559 CarD-like/TRCF domain PJW08_00920 PF00270 DEAD/DEAH box helicase PJW08_00920 PF00271 Helicase conserved C-terminal domain PJW08_00920 PF03461 TRCF domain PJW08_00920 PF17757 UvrB interaction domain PJW08_00925 PF00892 EamA-like transporter family PJW08_00940 PF02481 DNA recombination-mediator protein A PJW08_00940 PF17782 DprA winged helix domain PJW08_00970 PF12804 MobA-like NTP transferase domain PJW08_00975 PF01967 MoaC family PJW08_00980 PF00994 Probable molybdopterin binding domain PJW08_00980 PF03454 MoeA C-terminal region (domain IV) PJW08_00980 PF03453 MoeA N-terminal region (domain I and II) PJW08_00985 PF04055 Radical SAM superfamily PJW08_00985 PF06463 Molybdenum Cofactor Synthesis C PJW08_00990 PF06463 Molybdenum Cofactor Synthesis C PJW08_00990 PF04055 Radical SAM superfamily PJW08_01000 PF08808 RES domain PJW08_01015 PF01541 GIY-YIG catalytic domain PJW08_01015 PF08459 UvrC Helix-hairpin-helix N-terminal PJW08_01020 PF01734 Patatin-like phospholipase PJW08_01025 PF10150 Ribonuclease E/G family PJW08_01025 PF00575 S1 RNA binding domain PJW08_01030 PF00216 Bacterial DNA-binding protein PJW08_01060 PF07715 TonB-dependent Receptor Plug Domain PJW08_01060 PF00593 TonB dependent receptor PJW08_01065 PF07715 TonB-dependent Receptor Plug Domain PJW08_01065 PF00593 TonB dependent receptor PJW08_01110 PF00892 EamA-like transporter family PJW08_01115 PF05193 Peptidase M16 inactive domain PJW08_01115 PF00675 Insulinase (Peptidase family M16) PJW08_01130 PF01016 Ribosomal L27 protein PJW08_01135 PF04397 LytTr DNA-binding domain PJW08_01135 PF00072 Response regulator receiver domain PJW08_01140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PJW08_01140 PF06580 Histidine kinase PJW08_01150 PF01118 Semialdehyde dehydrogenase, NAD binding domain PJW08_01150 PF02774 Semialdehyde dehydrogenase, dimerisation domain PJW08_01165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PJW08_01165 PF00512 His Kinase A (phospho-acceptor) domain PJW08_01165 PF00672 HAMP domain PJW08_01195 PF05525 Branched-chain amino acid transport protein PJW08_01200 PF12697 Alpha/beta hydrolase family PJW08_01225 PF02390 Putative methyltransferase PJW08_01250 PF01106 NifU-like domain PJW08_01255 PF07992 Pyridine nucleotide-disulphide oxidoreductase PJW08_01260 PF04116 Fatty acid hydroxylase superfamily PJW08_01270 PF01226 Formate/nitrite transporter PJW08_01275 PF00258 Flavodoxin PJW08_01310 PF00593 TonB dependent receptor PJW08_01310 PF07715 TonB-dependent Receptor Plug Domain PJW08_01315 PF03061 Thioesterase superfamily PJW08_01320 PF01594 AI-2E family transporter PJW08_01345 PF00483 Nucleotidyl transferase PJW08_01360 PF02011 Glycosyl hydrolase family 48 PJW08_01360 PF00041 Fibronectin type III domain PJW08_01360 PF00553 Cellulose binding domain PJW08_01375 PF01447 Thermolysin metallopeptidase, catalytic domain PJW08_01375 PF07504 Fungalysin/Thermolysin Propeptide Motif PJW08_01375 PF03413 Peptidase propeptide and YPEB domain PJW08_01375 PF02868 Thermolysin metallopeptidase, alpha-helical domain PJW08_01380 PF00041 Fibronectin type III domain PJW08_01380 PF00704 Glycosyl hydrolases family 18 PJW08_01400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PJW08_01400 PF16736 Single Cache-like PJW08_01400 PF00512 His Kinase A (phospho-acceptor) domain PJW08_01400 PF00989 PAS fold PJW08_01415 PF03572 Peptidase family S41 PJW08_01415 PF13180 PDZ domain PJW08_01420 PF00825 Ribonuclease P PJW08_01440 PF03544 Gram-negative bacterial TonB protein C-terminal PJW08_01460 PF14693 Ribosomal protein TL5, C-terminal domain PJW08_01460 PF01386 Ribosomal L25p family PJW08_01465 PF01195 Peptidyl-tRNA hydrolase PJW08_01495 PF01554 MatE PJW08_01500 PF01624 MutS domain I PJW08_01500 PF05190 MutS family domain IV PJW08_01500 PF05192 MutS domain III PJW08_01500 PF00488 MutS domain V PJW08_01500 PF05188 MutS domain II PJW08_01505 PF01624 MutS domain I PJW08_01505 PF05188 MutS domain II PJW08_01505 PF05192 MutS domain III PJW08_01505 PF05190 MutS family domain IV PJW08_01505 PF00488 MutS domain V PJW08_01510 PF05192 MutS domain III PJW08_01510 PF01624 MutS domain I PJW08_01510 PF05188 MutS domain II PJW08_01510 PF05190 MutS family domain IV PJW08_01510 PF00488 MutS domain V PJW08_01515 PF05192 MutS domain III PJW08_01515 PF05188 MutS domain II PJW08_01515 PF00488 MutS domain V PJW08_01515 PF01624 MutS domain I PJW08_01515 PF05190 MutS family domain IV PJW08_01520 PF00588 SpoU rRNA Methylase family PJW08_01520 PF08032 RNA 2'-O ribose methyltransferase substrate binding PJW08_01530 PF07730 Histidine kinase PJW08_01530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PJW08_01540 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PJW08_01540 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PJW08_01545 PF00593 TonB dependent receptor PJW08_01545 PF07715 TonB-dependent Receptor Plug Domain PJW08_01565 PF03301 Tryptophan 2,3-dioxygenase PJW08_01575 PF01551 Peptidase family M23 PJW08_01585 PF00593 TonB dependent receptor PJW08_01585 PF07715 TonB-dependent Receptor Plug Domain PJW08_01625 PF02391 MoaE protein PJW08_01630 PF00162 Phosphoglycerate kinase PJW08_01660 PF00691 OmpA family PJW08_01660 PF13505 Outer membrane protein beta-barrel domain PJW08_01670 PF00579 tRNA synthetases class I (W and Y) PJW08_01680 PF03006 Haemolysin-III related PJW08_01685 PF01928 CYTH domain PJW08_01755 PF08447 PAS fold PJW08_01755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PJW08_01765 PF08447 PAS fold PJW08_01765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PJW08_01775 PF07499 RuvA, C-terminal domain PJW08_01775 PF01330 RuvA N terminal domain PJW08_01800 PF01597 Glycine cleavage H-protein PJW08_01825 PF01979 Amidohydrolase family PJW08_01855 PF00579 tRNA synthetases class I (W and Y) PJW08_01880 PF03150 Di-haem cytochrome c peroxidase PJW08_01880 PF00034 Cytochrome c PJW08_01890 PF07715 TonB-dependent Receptor Plug Domain PJW08_01890 PF00593 TonB dependent receptor PJW08_01895 PF07715 TonB-dependent Receptor Plug Domain PJW08_01895 PF00593 TonB dependent receptor PJW08_01925 PF08264 Anticodon-binding domain of tRNA PJW08_01925 PF13603 Leucyl-tRNA synthetase, Domain 2 PJW08_01925 PF09334 tRNA synthetases class I (M) PJW08_01960 PF01741 Large-conductance mechanosensitive channel, MscL PJW08_01970 PF00265 Thymidine kinase PJW08_02000 PF02576 RimP N-terminal domain PJW08_02175 PF07715 TonB-dependent Receptor Plug Domain PJW08_02175 PF00593 TonB dependent receptor PJW08_02185 PF01297 Zinc-uptake complex component A periplasmic PJW08_02190 PF00005 ABC transporter PJW08_02195 PF00950 ABC 3 transport family PJW08_02200 PF00950 ABC 3 transport family PJW08_02205 PF12705 PD-(D/E)XK nuclease superfamily PJW08_02205 PF00580 UvrD/REP helicase N-terminal domain PJW08_02205 PF13361 UvrD-like helicase C-terminal domain PJW08_02215 PF12705 PD-(D/E)XK nuclease superfamily PJW08_02215 PF00580 UvrD/REP helicase N-terminal domain PJW08_02215 PF13361 UvrD-like helicase C-terminal domain PJW08_02240 PF02416 mttA/Hcf106 family PJW08_02250 PF02548 Ketopantoate hydroxymethyltransferase PJW08_02255 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PJW08_02255 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PJW08_02280 PF00202 Aminotransferase class-III PJW08_02290 PF00155 Aminotransferase class I and II PJW08_02305 PF16078 2-oxoglutarate dehydrogenase N-terminus PJW08_02305 PF00676 Dehydrogenase E1 component PJW08_02305 PF16870 2-oxoglutarate dehydrogenase C-terminal PJW08_02305 PF02779 Transketolase, pyrimidine binding domain PJW08_02310 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PJW08_02310 PF02817 e3 binding domain PJW08_02310 PF00364 Biotin-requiring enzyme PJW08_02320 PF00849 RNA pseudouridylate synthase PJW08_02320 PF01479 S4 domain PJW08_02325 PF01926 50S ribosome-binding GTPase PJW08_02335 PF02381 MraZ protein, putative antitoxin-like PJW08_02340 PF01795 MraW methylase family PJW08_02355 PF03793 PASTA domain PJW08_02355 PF03717 Penicillin-binding Protein dimerisation domain PJW08_02355 PF00905 Penicillin binding protein transpeptidase domain PJW08_02360 PF08245 Mur ligase middle domain PJW08_02360 PF02875 Mur ligase family, glutamate ligase domain PJW08_02360 PF01225 Mur ligase family, catalytic domain PJW08_02365 PF00953 Glycosyl transferase family 4 PJW08_02365 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 PJW08_02380 PF04101 Glycosyltransferase family 28 C-terminal domain PJW08_02380 PF03033 Glycosyltransferase family 28 N-terminal domain PJW08_02400 PF12327 FtsZ family, C-terminal domain PJW08_02400 PF00091 Tubulin/FtsZ family, GTPase domain PJW08_02405 PF09424 Yqey-like protein PJW08_02420 PF00571 CBS domain PJW08_02430 PF03979 Sigma-70 factor, region 1.1 PJW08_02430 PF04539 Sigma-70 region 3 PJW08_02430 PF04545 Sigma-70, region 4 PJW08_02430 PF04542 Sigma-70 region 2 PJW08_02430 PF00140 Sigma-70 factor, region 1.2 PJW08_02435 PF04542 Sigma-70 region 2 PJW08_02435 PF08281 Sigma-70, region 4 PJW08_02440 PF08281 Sigma-70, region 4 PJW08_02440 PF04542 Sigma-70 region 2 PJW08_02460 PF01209 ubiE/COQ5 methyltransferase family PJW08_02465 PF01106 NifU-like domain PJW08_02500 PF01649 Ribosomal protein S20 PJW08_02525 PF02673 Bacitracin resistance protein BacA PJW08_02535 PF18075 FtsX extracellular domain PJW08_02545 PF02033 Ribosome-binding factor A PJW08_02570 PF01207 Dihydrouridine synthase (Dus) PJW08_02585 PF03358 NADPH-dependent FMN reductase PJW08_02605 PF07715 TonB-dependent Receptor Plug Domain PJW08_02605 PF00593 TonB dependent receptor PJW08_02625 PF01618 MotA/TolQ/ExbB proton channel family PJW08_02635 PF02472 Biopolymer transport protein ExbD/TolR PJW08_02675 PF01765 Ribosome recycling factor PJW08_02680 PF00696 Amino acid kinase family PJW08_02685 PF00889 Elongation factor TS PJW08_02725 PF00557 Metallopeptidase family M24 PJW08_02770 PF04116 Fatty acid hydroxylase superfamily PJW08_02790 PF03109 ABC1 family PJW08_02820 PF00255 Glutathione peroxidase PJW08_02830 PF03441 FAD binding domain of DNA photolyase PJW08_02830 PF00875 DNA photolyase PJW08_02850 PF07715 TonB-dependent Receptor Plug Domain PJW08_02850 PF00593 TonB dependent receptor PJW08_02900 PF04241 Protein of unknown function (DUF423) PJW08_02915 PF01625 Peptide methionine sulfoxide reductase PJW08_02920 PF01641 SelR domain PJW08_02990 PF02423 Ornithine cyclodeaminase/mu-crystallin family PJW08_02995 PF05544 Proline racemase PJW08_03000 PF00202 Aminotransferase class-III PJW08_03005 PF14338 Mrr N-terminal domain PJW08_03005 PF04471 Restriction endonuclease PJW08_03015 PF00557 Metallopeptidase family M24 PJW08_03015 PF01321 Creatinase/Prolidase N-terminal domain PJW08_03030 PF05195 Aminopeptidase P, N-terminal domain PJW08_03030 PF00557 Metallopeptidase family M24 PJW08_03065 PF12833 Helix-turn-helix domain PJW08_03065 PF14525 AraC-binding-like domain PJW08_03070 PF01177 Asp/Glu/Hydantoin racemase PJW08_03110 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ PJW08_03120 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV PJW08_03150 PF02540 NAD synthase PJW08_03170 PF00072 Response regulator receiver domain PJW08_03170 PF01584 CheW-like domain PJW08_03175 PF00072 Response regulator receiver domain PJW08_03175 PF00196 Bacterial regulatory proteins, luxR family PJW08_03195 PF00312 Ribosomal protein S15 PJW08_03200 PF01039 Carboxyl transferase domain PJW08_03205 PF01116 Fructose-bisphosphate aldolase class-II PJW08_03220 PF08032 RNA 2'-O ribose methyltransferase substrate binding PJW08_03220 PF00588 SpoU rRNA Methylase family PJW08_03260 PF03099 Biotin/lipoate A/B protein ligase family PJW08_03265 PF04264 YceI-like domain PJW08_03300 PF02580 D-Tyr-tRNA(Tyr) deacylase PJW08_03305 PF03193 RsgA GTPase PJW08_03305 PF16745 RsgA N-terminal domain PJW08_03310 PF00793 DAHP synthetase I family PJW08_03310 PF18152 DAHP synthase ferredoxin-like domain PJW08_03315 PF02153 Prephenate dehydrogenase PJW08_03315 PF01817 Chorismate mutase type II PJW08_03410 PF00871 Acetokinase family PJW08_03415 PF01416 tRNA pseudouridine synthase PJW08_03425 PF03702 Anhydro-N-acetylmuramic acid kinase PJW08_03435 PF06450 Bacterial Na+/H+ antiporter B (NhaB) PJW08_03440 PF06450 Bacterial Na+/H+ antiporter B (NhaB) PJW08_03445 PF01618 MotA/TolQ/ExbB proton channel family PJW08_03460 PF08245 Mur ligase middle domain PJW08_03460 PF02875 Mur ligase family, glutamate ligase domain PJW08_03480 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PJW08_03480 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PJW08_03480 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PJW08_03495 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PJW08_03495 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PJW08_03515 PF01370 NAD dependent epimerase/dehydratase family PJW08_03530 PF03023 Lipid II flippase MurJ PJW08_03535 PF02719 Polysaccharide biosynthesis protein PJW08_03535 PF08485 Polysaccharide biosynthesis protein C-terminal PJW08_03565 PF00534 Glycosyl transferases group 1 PJW08_03580 PF00483 Nucleotidyl transferase PJW08_03585 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase PJW08_03590 PF16363 GDP-mannose 4,6 dehydratase PJW08_03615 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PJW08_03630 PF08245 Mur ligase middle domain PJW08_03630 PF02875 Mur ligase family, glutamate ligase domain PJW08_03630 PF01225 Mur ligase family, catalytic domain PJW08_03650 PF02666 Phosphatidylserine decarboxylase PJW08_03670 PF00485 Phosphoribulokinase / Uridine kinase family PJW08_03695 PF02311 AraC-like ligand binding domain PJW08_03695 PF12833 Helix-turn-helix domain PJW08_03715 PF02537 CrcB-like protein, Camphor Resistance (CrcB) PJW08_03730 PF00809 Pterin binding enzyme PJW08_03735 PF02457 DisA bacterial checkpoint controller nucleotide-binding PJW08_03750 PF01416 tRNA pseudouridine synthase PJW08_03760 PF07730 Histidine kinase PJW08_03760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PJW08_03790 PF00196 Bacterial regulatory proteins, luxR family PJW08_03790 PF00072 Response regulator receiver domain PJW08_03815 PF04237 YjbR PJW08_03825 PF07992 Pyridine nucleotide-disulphide oxidoreductase PJW08_03835 PF00246 Zinc carboxypeptidase PJW08_03835 PF18027 Cytosolic carboxypeptidase N-terminal domain PJW08_03840 PF18027 Cytosolic carboxypeptidase N-terminal domain PJW08_03840 PF00246 Zinc carboxypeptidase PJW08_03860 PF00691 OmpA family PJW08_03860 PF01389 OmpA-like transmembrane domain PJW08_03890 PF13419 Haloacid dehalogenase-like hydrolase PJW08_03915 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PJW08_03915 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PJW08_03920 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PJW08_03925 PF01569 PAP2 superfamily PJW08_03930 PF13395 HNH endonuclease PJW08_03930 PF18541 RuvC endonuclease subdomain 3 PJW08_03935 PF09827 CRISPR associated protein Cas2 PJW08_03960 PF02585 GlcNAc-PI de-N-acetylase PJW08_04070 PF00691 OmpA family PJW08_04070 PF01389 OmpA-like transmembrane domain PJW08_04100 PF02622 Uncharacterized ACR, COG1678 PJW08_04105 PF00072 Response regulator receiver domain PJW08_04105 PF04397 LytTr DNA-binding domain PJW08_04110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PJW08_04110 PF06580 Histidine kinase PJW08_04125 PF00258 Flavodoxin PJW08_04125 PF00175 Oxidoreductase NAD-binding domain PJW08_04125 PF00667 FAD binding domain PJW08_04145 PF07715 TonB-dependent Receptor Plug Domain PJW08_04145 PF00593 TonB dependent receptor PJW08_04165 PF08281 Sigma-70, region 4 PJW08_04165 PF04542 Sigma-70 region 2 PJW08_04170 PF00633 Helix-hairpin-helix motif PJW08_04170 PF10576 Iron-sulfur binding domain of endonuclease III PJW08_04170 PF00730 HhH-GPD superfamily base excision DNA repair protein PJW08_04175 PF00578 AhpC/TSA family PJW08_04190 PF01979 Amidohydrolase family PJW08_04210 PF10079 Bacillithiol biosynthesis BshC PJW08_04215 PF05971 RNA methyltransferase PJW08_04220 PF05971 RNA methyltransferase PJW08_04235 PF05173 Dihydrodipicolinate reductase, C-terminus PJW08_04235 PF01113 Dihydrodipicolinate reductase, N-terminus PJW08_04260 PF03976 Polyphosphate kinase 2 (PPK2) PJW08_04275 PF00266 Aminotransferase class-V PJW08_04290 PF01784 NIF3 (NGG1p interacting factor 3) PJW08_04295 PF02606 Tetraacyldisaccharide-1-P 4'-kinase PJW08_04305 PF00005 ABC transporter PJW08_04390 PF00313 'Cold-shock' DNA-binding domain PJW08_04395 PF00313 'Cold-shock' DNA-binding domain PJW08_04400 PF00313 'Cold-shock' DNA-binding domain PJW08_04405 PF09962 Uncharacterized conserved protein (DUF2196) PJW08_04425 PF04055 Radical SAM superfamily PJW08_04425 PF01938 TRAM domain PJW08_04425 PF00919 Uncharacterized protein family UPF0004 PJW08_04440 PF03992 Antibiotic biosynthesis monooxygenase PJW08_04445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PJW08_04475 PF00885 6,7-dimethyl-8-ribityllumazine synthase PJW08_04480 PF00691 OmpA family PJW08_04480 PF01389 OmpA-like transmembrane domain PJW08_04510 PF00923 Transaldolase/Fructose-6-phosphate aldolase PJW08_04520 PF17783 CvfB-like winged helix domain PJW08_04520 PF13509 S1 domain PJW08_04530 PF00378 Enoyl-CoA hydratase/isomerase PJW08_04540 PF00994 Probable molybdopterin binding domain PJW08_04540 PF02464 Competence-damaged protein PJW08_04540 PF18146 Damage-inducible protein CinA KH domain PJW08_04545 PF00830 Ribosomal L28 family PJW08_04550 PF00471 Ribosomal protein L33 PJW08_04560 PF00448 SRP54-type protein, GTPase domain PJW08_04560 PF02881 SRP54-type protein, helical bundle domain PJW08_04575 PF04055 Radical SAM superfamily PJW08_04575 PF18693 TRAM domain PJW08_04575 PF00919 Uncharacterized protein family UPF0004 PJW08_04645 PF01259 SAICAR synthetase PJW08_04665 PF00155 Aminotransferase class I and II PJW08_04765 PF00293 NUDIX domain PJW08_04775 PF01238 Phosphomannose isomerase type I PJW08_04785 PF02348 Cytidylyltransferase PJW08_04795 PF00302 Chloramphenicol acetyltransferase PJW08_04830 PF03099 Biotin/lipoate A/B protein ligase family PJW08_04830 PF12706 Beta-lactamase superfamily domain PJW08_04845 PF03313 Serine dehydratase alpha chain PJW08_04845 PF03315 Serine dehydratase beta chain PJW08_04870 PF00365 Phosphofructokinase PJW08_04875 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PJW08_04875 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PJW08_04880 PF01042 Endoribonuclease L-PSP PJW08_04890 PF04453 LPS transport system D PJW08_04890 PF03968 OstA-like protein PJW08_04900 PF01520 N-acetylmuramoyl-L-alanine amidase PJW08_04910 PF02754 Cysteine-rich domain PJW08_04910 PF13183 4Fe-4S dicluster domain PJW08_04915 PF02754 Cysteine-rich domain PJW08_04915 PF13183 4Fe-4S dicluster domain PJW08_04925 PF01040 UbiA prenyltransferase family PJW08_04940 PF13378 Enolase C-terminal domain-like PJW08_04940 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PJW08_04945 PF02517 CPBP intramembrane metalloprotease PJW08_04960 PF00410 Ribosomal protein S8 PJW08_04975 PF03719 Ribosomal protein S5, C-terminal domain PJW08_04975 PF00333 Ribosomal protein S5, N-terminal domain PJW08_04980 PF00327 Ribosomal protein L30p/L7e PJW08_04985 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A PJW08_04995 PF01176 Translation initiation factor 1A / IF-1 PJW08_05000 PF00444 Ribosomal protein L36 PJW08_05005 PF00416 Ribosomal protein S13/S18 PJW08_05025 PF01196 Ribosomal protein L17 PJW08_05035 PF07715 TonB-dependent Receptor Plug Domain PJW08_05035 PF00593 TonB dependent receptor PJW08_05075 PF05193 Peptidase M16 inactive domain PJW08_05075 PF00675 Insulinase (Peptidase family M16) PJW08_05090 PF00491 Arginase family PJW08_05095 PF02597 ThiS family PJW08_05105 PF02581 Thiamine monophosphate synthase PJW08_05110 PF08543 Phosphomethylpyrimidine kinase PJW08_05115 PF02581 Thiamine monophosphate synthase PJW08_05145 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) PJW08_05150 PF00106 short chain dehydrogenase PJW08_05170 PF00005 ABC transporter PJW08_05180 PF01725 Ham1 family PJW08_05190 PF02590 Predicted SPOUT methyltransferase PJW08_05205 PF03631 Virulence factor BrkB PJW08_05220 PF07715 TonB-dependent Receptor Plug Domain PJW08_05220 PF00593 TonB dependent receptor PJW08_05225 PF07715 TonB-dependent Receptor Plug Domain PJW08_05225 PF00593 TonB dependent receptor PJW08_05250 PF00072 Response regulator receiver domain PJW08_05250 PF00486 Transcriptional regulatory protein, C terminal PJW08_05255 PF00512 His Kinase A (phospho-acceptor) domain PJW08_05255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PJW08_05265 PF01121 Dephospho-CoA kinase PJW08_05305 PF00005 ABC transporter PJW08_05305 PF00664 ABC transporter transmembrane region PJW08_05315 PF00425 chorismate binding enzyme PJW08_05320 PF03061 Thioesterase superfamily PJW08_05330 PF01300 Telomere recombination PJW08_05350 PF16326 ABC transporter C-terminal domain PJW08_05350 PF12848 ABC transporter PJW08_05350 PF00005 ABC transporter PJW08_05380 PF08501 Shikimate dehydrogenase substrate binding domain PJW08_05420 PF01966 HD domain PJW08_05420 PF00013 KH domain PJW08_05420 PF12072 Domain of unknown function (DUF3552) PJW08_05485 PF01746 tRNA (Guanine-1)-methyltransferase PJW08_05500 PF07687 Peptidase dimerisation domain PJW08_05500 PF01546 Peptidase family M20/M25/M40 PJW08_05505 PF02132 RecR protein PJW08_05505 PF13662 Toprim domain PJW08_05515 PF03653 Uncharacterised protein family (UPF0093) PJW08_05530 PF00762 Ferrochelatase PJW08_05540 PF12833 Helix-turn-helix domain PJW08_05545 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain PJW08_05545 PF01488 Shikimate / quinate 5-dehydrogenase PJW08_05545 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain PJW08_05560 PF00202 Aminotransferase class-III PJW08_05590 PF08338 Domain of unknown function (DUF1731) PJW08_05590 PF01370 NAD dependent epimerase/dehydratase family PJW08_05605 PF01588 Putative tRNA binding domain PJW08_05605 PF09334 tRNA synthetases class I (M) PJW08_05620 PF01809 Putative membrane protein insertion efficiency factor PJW08_05625 PF01790 Prolipoprotein diacylglyceryl transferase PJW08_05630 PF00561 alpha/beta hydrolase fold PJW08_05635 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PJW08_05660 PF00593 TonB dependent receptor PJW08_05660 PF07715 TonB-dependent Receptor Plug Domain PJW08_05680 PF00468 Ribosomal protein L34 PJW08_05710 PF00588 SpoU rRNA Methylase family PJW08_05720 PF09905 DNA-binding protein VF530 PJW08_05745 PF00149 Calcineurin-like phosphoesterase PJW08_05775 PF01433 Peptidase family M1 domain PJW08_05775 PF11838 ERAP1-like C-terminal domain PJW08_05790 PF01497 Periplasmic binding protein PJW08_05800 PF02654 Cobalamin-5-phosphate synthase PJW08_05810 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase PJW08_05815 PF07715 TonB-dependent Receptor Plug Domain PJW08_05815 PF00593 TonB dependent receptor PJW08_05830 PF00005 ABC transporter PJW08_05840 PF02687 FtsX-like permease family PJW08_05840 PF00005 ABC transporter PJW08_05840 PF12704 MacB-like periplasmic core domain PJW08_05850 PF01571 Aminomethyltransferase folate-binding domain PJW08_05850 PF08669 Glycine cleavage T-protein C-terminal barrel domain PJW08_05855 PF09905 DNA-binding protein VF530 PJW08_05865 PF00106 short chain dehydrogenase PJW08_05870 PF03819 MazG nucleotide pyrophosphohydrolase domain PJW08_05880 PF01327 Polypeptide deformylase PJW08_05885 PF03652 Holliday junction resolvase PJW08_05890 PF14602 Hexapeptide repeat of succinyl-transferase PJW08_05890 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal PJW08_05890 PF00132 Bacterial transferase hexapeptide (six repeats) PJW08_05920 PF01300 Telomere recombination PJW08_05940 PF00005 ABC transporter PJW08_05940 PF00664 ABC transporter transmembrane region PJW08_05950 PF00535 Glycosyl transferase family 2 PJW08_05975 PF01220 Dehydroquinase class II PJW08_05990 PF01066 CDP-alcohol phosphatidyltransferase PJW08_05995 PF00005 ABC transporter PJW08_06005 PF00902 Sec-independent protein translocase protein (TatC) PJW08_06010 PF01380 SIS domain PJW08_06010 PF00571 CBS domain PJW08_06030 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PJW08_06030 PF05222 Alanine dehydrogenase/PNT, N-terminal domain PJW08_06050 PF00132 Bacterial transferase hexapeptide (six repeats) PJW08_06050 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD PJW08_06055 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase PJW08_06055 PF07977 FabA-like domain PJW08_06060 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 PJW08_06060 PF00132 Bacterial transferase hexapeptide (six repeats) PJW08_06075 PF02629 CoA binding domain PJW08_06075 PF00549 CoA-ligase PJW08_06085 PF02514 CobN/Magnesium Chelatase PJW08_06090 PF02514 CobN/Magnesium Chelatase PJW08_06100 PF02492 CobW/HypB/UreG, nucleotide-binding domain PJW08_06100 PF07683 Cobalamin synthesis protein cobW C-terminal domain PJW08_06105 PF01923 Cobalamin adenosyltransferase PJW08_06110 PF07685 CobB/CobQ-like glutamine amidotransferase domain PJW08_06110 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PJW08_06115 PF01078 Magnesium chelatase, subunit ChlI PJW08_06115 PF17863 AAA lid domain PJW08_06120 PF01078 Magnesium chelatase, subunit ChlI PJW08_06120 PF17863 AAA lid domain PJW08_06125 PF17863 AAA lid domain PJW08_06125 PF01078 Magnesium chelatase, subunit ChlI PJW08_06135 PF01888 CbiD PJW08_06140 PF02571 Precorrin-6x reductase CbiJ/CobK PJW08_06145 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PJW08_06150 PF11760 Cobalamin synthesis G N-terminal PJW08_06150 PF11761 Cobalamin biosynthesis central region PJW08_06150 PF01890 Cobalamin synthesis G C-terminus PJW08_06155 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PJW08_06160 PF00881 Nitroreductase family PJW08_06165 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PJW08_06170 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PJW08_06175 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PJW08_06185 PF01903 CbiX PJW08_06190 PF10414 Sirohaem synthase dimerisation region PJW08_06190 PF14824 Sirohaem biosynthesis protein central PJW08_06190 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PJW08_06230 PF03186 CobD/Cbib protein PJW08_06235 PF00155 Aminotransferase class I and II PJW08_06240 PF07685 CobB/CobQ-like glutamine amidotransferase domain PJW08_06255 PF00679 Elongation factor G C-terminus PJW08_06255 PF00009 Elongation factor Tu GTP binding domain PJW08_06255 PF14492 Elongation Factor G, domain II PJW08_06255 PF03764 Elongation factor G, domain IV PJW08_06265 PF13545 Crp-like helix-turn-helix domain PJW08_06265 PF00027 Cyclic nucleotide-binding domain PJW08_06275 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) PJW08_06285 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PJW08_06285 PF00361 Proton-conducting membrane transporter PJW08_06290 PF00916 Sulfate permease family PJW08_06290 PF01740 STAS domain PJW08_06300 PF01420 Type I restriction modification DNA specificity domain PJW08_06375 PF04055 Radical SAM superfamily PJW08_06400 PF13087 AAA domain PJW08_06400 PF13086 AAA domain PJW08_06400 PF13195 Protein of unknown function (DUF4011) PJW08_06425 PF00004 ATPase family associated with various cellular activities (AAA) PJW08_06425 PF17862 AAA+ lid domain PJW08_06425 PF01434 Peptidase family M41 PJW08_06440 PF12102 Domain of unknown function (DUF3578) PJW08_06440 PF07728 AAA domain (dynein-related subfamily) PJW08_06455 PF01420 Type I restriction modification DNA specificity domain PJW08_06460 PF01420 Type I restriction modification DNA specificity domain PJW08_06470 PF02384 N-6 DNA Methylase PJW08_06475 PF02384 N-6 DNA Methylase PJW08_06490 PF04851 Type III restriction enzyme, res subunit PJW08_06490 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) PJW08_06490 PF00271 Helicase conserved C-terminal domain PJW08_06490 PF08463 EcoEI R protein C-terminal PJW08_06565 PF01076 Plasmid recombination enzyme PJW08_06610 PF12631 MnmE helical domain PJW08_06610 PF01926 50S ribosome-binding GTPase PJW08_06610 PF10396 GTP-binding protein TrmE N-terminus PJW08_06675 PF00691 OmpA family PJW08_06675 PF00223 Photosystem I psaA/psaB protein PJW08_06700 PF00207 Alpha-2-macroglobulin family PJW08_06700 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain PJW08_06700 PF17962 Bacterial macroglobulin domain 6 PJW08_06700 PF01835 MG2 domain PJW08_06700 PF07678 A-macroglobulin TED domain PJW08_06700 PF11974 Bacterial alpha-2-macroglobulin MG3 domain PJW08_06700 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain PJW08_06700 PF07703 Alpha-2-macroglobulin bait region domain PJW08_06700 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain PJW08_06735 PF01053 Cys/Met metabolism PLP-dependent enzyme PJW08_06750 PF02082 Transcriptional regulator PJW08_06760 PF01507 Phosphoadenosine phosphosulfate reductase family PJW08_06770 PF00009 Elongation factor Tu GTP binding domain PJW08_06780 PF10414 Sirohaem synthase dimerisation region PJW08_06780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PJW08_06780 PF14824 Sirohaem biosynthesis protein central PJW08_06785 PF10414 Sirohaem synthase dimerisation region PJW08_06785 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PJW08_06785 PF14824 Sirohaem biosynthesis protein central PJW08_06790 PF07992 Pyridine nucleotide-disulphide oxidoreductase PJW08_06795 PF00132 Bacterial transferase hexapeptide (six repeats) PJW08_06800 PF00291 Pyridoxal-phosphate dependent enzyme PJW08_06815 PF02219 Methylenetetrahydrofolate reductase PJW08_06835 PF00694 Aconitase C-terminal domain PJW08_06860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PJW08_06860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PJW08_06860 PF00205 Thiamine pyrophosphate enzyme, central domain PJW08_06875 PF00585 C-terminal regulatory domain of Threonine dehydratase PJW08_06875 PF00291 Pyridoxal-phosphate dependent enzyme PJW08_06885 PF00585 C-terminal regulatory domain of Threonine dehydratase PJW08_06885 PF00291 Pyridoxal-phosphate dependent enzyme PJW08_06915 PF01475 Ferric uptake regulator family PJW08_06920 PF02824 TGS domain PJW08_06920 PF04607 Region found in RelA / SpoT proteins PJW08_06920 PF13291 ACT domain PJW08_06930 PF01250 Ribosomal protein S6 PJW08_06935 PF01084 Ribosomal protein S18 PJW08_06945 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PJW08_06945 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PJW08_06950 PF07687 Peptidase dimerisation domain PJW08_06950 PF01546 Peptidase family M20/M25/M40 PJW08_06970 PF14528 LAGLIDADG-like domain PJW08_06970 PF03796 DnaB-like helicase C terminal domain PJW08_06970 PF00772 DnaB-like helicase N terminal domain PJW08_06990 PF00534 Glycosyl transferases group 1 PJW08_06990 PF13439 Glycosyltransferase Family 4 PJW08_06995 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PJW08_06995 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PJW08_07010 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PJW08_07010 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PJW08_07030 PF01048 Phosphorylase superfamily PJW08_07050 PF00034 Cytochrome c PJW08_07050 PF03150 Di-haem cytochrome c peroxidase PJW08_07095 PF05552 Conserved TM helix PJW08_07105 PF13087 AAA domain PJW08_07105 PF13091 PLD-like domain PJW08_07125 PF02575 YbaB/EbfC DNA-binding family PJW08_07130 PF00326 Prolyl oligopeptidase family PJW08_07130 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain PJW08_07165 PF00905 Penicillin binding protein transpeptidase domain PJW08_07165 PF00912 Transglycosylase PJW08_07200 PF00580 UvrD/REP helicase N-terminal domain PJW08_07200 PF13361 UvrD-like helicase C-terminal domain PJW08_07215 PF01025 GrpE PJW08_07220 PF00226 DnaJ domain PJW08_07220 PF01556 DnaJ C terminal domain PJW08_07220 PF00684 DnaJ central domain PJW08_07265 PF01202 Shikimate kinase PJW08_07270 PF00156 Phosphoribosyl transferase domain PJW08_07275 PF01479 S4 domain PJW08_07295 PF02779 Transketolase, pyrimidine binding domain PJW08_07295 PF02780 Transketolase, C-terminal domain PJW08_07300 PF02545 Maf-like protein PJW08_07310 PF01668 SmpB protein PJW08_07315 PF03922 OmpW family PJW08_07320 PF17871 AAA lid domain PJW08_07320 PF02861 Clp amino terminal domain, pathogenicity island component PJW08_07320 PF10431 C-terminal, D2-small domain, of ClpB protein PJW08_07320 PF07724 AAA domain (Cdc48 subfamily) PJW08_07320 PF00004 ATPase family associated with various cellular activities (AAA) PJW08_07340 PF00464 Serine hydroxymethyltransferase PJW08_07345 PF00999 Sodium/hydrogen exchanger family PJW08_07370 PF00270 DEAD/DEAH box helicase PJW08_07370 PF00271 Helicase conserved C-terminal domain PJW08_07375 PF00313 'Cold-shock' DNA-binding domain PJW08_07380 PF00313 'Cold-shock' DNA-binding domain PJW08_07390 PF00313 'Cold-shock' DNA-binding domain PJW08_07405 PF00465 Iron-containing alcohol dehydrogenase PJW08_07415 PF00440 Bacterial regulatory proteins, tetR family PJW08_07415 PF08359 YsiA-like protein, C-terminal region PJW08_07425 PF07730 Histidine kinase PJW08_07425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PJW08_07445 PF00313 'Cold-shock' DNA-binding domain PJW08_07450 PF13404 AsnC-type helix-turn-helix domain PJW08_07450 PF01037 Lrp/AsnC ligand binding domain PJW08_07495 PF00849 RNA pseudouridylate synthase PJW08_07500 PF01037 Lrp/AsnC ligand binding domain PJW08_07540 PF01205 Uncharacterized protein family UPF0029 PJW08_07540 PF09186 Domain of unknown function (DUF1949) PJW08_07550 PF13419 Haloacid dehalogenase-like hydrolase PJW08_07555 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PJW08_07555 PF01872 RibD C-terminal domain PJW08_07580 PF02634 FdhD/NarQ family PJW08_07635 PF01180 Dihydroorotate dehydrogenase PJW08_07650 PF04231 Endonuclease I PJW08_07710 PF00005 ABC transporter PJW08_07710 PF12848 ABC transporter PJW08_07755 PF00873 AcrB/AcrD/AcrF family PJW08_07770 PF03061 Thioesterase superfamily PJW08_07800 PF00593 TonB dependent receptor PJW08_07800 PF07715 TonB-dependent Receptor Plug Domain PJW08_07875 PF05552 Conserved TM helix PJW08_07875 PF00924 Mechanosensitive ion channel PJW08_07895 PF03264 NapC/NirT cytochrome c family, N-terminal region PJW08_07905 PF05140 ResB-like family PJW08_07905 PF01578 Cytochrome C assembly protein PJW08_07910 PF01578 Cytochrome C assembly protein PJW08_07910 PF05140 ResB-like family PJW08_07985 PF02424 ApbE family PJW08_08040 PF08402 TOBE domain PJW08_08040 PF00005 ABC transporter PJW08_08055 PF14785 Maltose transport system permease protein MalF P2 domain PJW08_08055 PF00528 Binding-protein-dependent transport system inner membrane component PJW08_08085 PF13416 Bacterial extracellular solute-binding protein PJW08_08125 PF00149 Calcineurin-like phosphoesterase PJW08_08135 PF08502 LeuA allosteric (dimerisation) domain PJW08_08135 PF00682 HMGL-like PJW08_08155 PF00155 Aminotransferase class I and II PJW08_08165 PF00230 Major intrinsic protein PJW08_08185 PF04055 Radical SAM superfamily PJW08_08220 PF17191 RecG wedge domain PJW08_08220 PF00271 Helicase conserved C-terminal domain PJW08_08220 PF00270 DEAD/DEAH box helicase PJW08_08230 PF01189 16S rRNA methyltransferase RsmB/F PJW08_08230 PF01029 NusB family PJW08_08245 PF00271 Helicase conserved C-terminal domain PJW08_08245 PF00270 DEAD/DEAH box helicase PJW08_08280 PF07715 TonB-dependent Receptor Plug Domain PJW08_08280 PF00593 TonB dependent receptor PJW08_08295 PF00448 SRP54-type protein, GTPase domain PJW08_08295 PF02881 SRP54-type protein, helical bundle domain PJW08_08295 PF02978 Signal peptide binding domain PJW08_08350 PF00639 PPIC-type PPIASE domain PJW08_08350 PF09312 SurA N-terminal domain PJW08_08370 PF00270 DEAD/DEAH box helicase PJW08_08370 PF00570 HRDC domain PJW08_08370 PF16124 RecQ zinc-binding PJW08_08370 PF09382 RQC domain PJW08_08370 PF00271 Helicase conserved C-terminal domain PJW08_08395 PF02525 Flavodoxin-like fold PJW08_08400 PF02926 THUMP domain PJW08_08400 PF01170 Putative RNA methylase family UPF0020 PJW08_08420 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit PJW08_08440 PF00849 RNA pseudouridylate synthase PJW08_08440 PF01479 S4 domain PJW08_08570 PF02224 Cytidylate kinase PJW08_08590 PF01467 Cytidylyltransferase-like PJW08_08595 PF01238 Phosphomannose isomerase type I PJW08_08600 PF01238 Phosphomannose isomerase type I PJW08_08610 PF00072 Response regulator receiver domain PJW08_08610 PF00486 Transcriptional regulatory protein, C terminal PJW08_08655 PF04397 LytTr DNA-binding domain PJW08_08655 PF00072 Response regulator receiver domain PJW08_08665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PJW08_08665 PF00512 His Kinase A (phospho-acceptor) domain PJW08_08665 PF07689 KaiB domain PJW08_08690 PF00072 Response regulator receiver domain PJW08_08710 PF02910 Fumarate reductase flavoprotein C-term PJW08_08710 PF00890 FAD binding domain PJW08_08740 PF10518 TAT (twin-arginine translocation) pathway signal sequence PJW08_08740 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PJW08_08740 PF01568 Molydopterin dinucleotide binding domain PJW08_08740 PF00384 Molybdopterin oxidoreductase PJW08_08745 PF00384 Molybdopterin oxidoreductase PJW08_08745 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PJW08_08745 PF01568 Molydopterin dinucleotide binding domain PJW08_08750 PF00384 Molybdopterin oxidoreductase PJW08_08750 PF01568 Molydopterin dinucleotide binding domain PJW08_08750 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PJW08_08755 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PJW08_08755 PF00384 Molybdopterin oxidoreductase PJW08_08755 PF01568 Molydopterin dinucleotide binding domain PJW08_08770 PF00037 4Fe-4S binding domain PJW08_08770 PF13247 4Fe-4S dicluster domain PJW08_08790 PF02810 SEC-C motif PJW08_08800 PF00288 GHMP kinases N terminal domain PJW08_08800 PF08544 GHMP kinases C terminal PJW08_08820 PF00849 RNA pseudouridylate synthase PJW08_08825 PF00849 RNA pseudouridylate synthase PJW08_08865 PF00266 Aminotransferase class-V PJW08_08930 PF00977 Histidine biosynthesis protein PJW08_08945 PF00155 Aminotransferase class I and II PJW08_08950 PF00815 Histidinol dehydrogenase PJW08_08955 PF08029 HisG, C-terminal domain PJW08_08955 PF01634 ATP phosphoribosyltransferase PJW08_08965 PF01619 Proline dehydrogenase PJW08_08975 PF01979 Amidohydrolase family PJW08_08990 PF00491 Arginase family PJW08_09025 PF04397 LytTr DNA-binding domain PJW08_09025 PF00072 Response regulator receiver domain PJW08_09030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PJW08_09030 PF02743 Cache domain PJW08_09030 PF06580 Histidine kinase PJW08_09030 PF00672 HAMP domain PJW08_09050 PF03462 PCRF domain PJW08_09050 PF00472 RF-1 domain PJW08_09055 PF03960 ArsC family PJW08_09065 PF02709 N-terminal domain of galactosyltransferase PJW08_09065 PF00535 Glycosyl transferase family 2 PJW08_09105 PF00210 Ferritin-like domain PJW08_09110 PF00701 Dihydrodipicolinate synthetase family PJW08_09130 PF13495 Phage integrase, N-terminal SAM-like domain PJW08_09130 PF00589 Phage integrase family PJW08_09260 PF00149 Calcineurin-like phosphoesterase PJW08_09270 PF00069 Protein kinase domain PJW08_09270 PF03793 PASTA domain PJW08_09405 PF05970 PIF1-like helicase PJW08_09405 PF14493 Helix-turn-helix domain PJW08_09410 PF02689 Helicase PJW08_09410 PF05970 PIF1-like helicase PJW08_09425 PF00665 Integrase core domain PJW08_09425 PF13276 HTH-like domain PJW08_09425 PF13333 Integrase core domain PJW08_09430 PF01209 ubiE/COQ5 methyltransferase family PJW08_09490 PF13276 HTH-like domain PJW08_09490 PF13333 Integrase core domain PJW08_09490 PF00665 Integrase core domain PJW08_09590 PF13276 HTH-like domain PJW08_09590 PF00665 Integrase core domain PJW08_09590 PF13333 Integrase core domain PJW08_09605 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system PJW08_09610 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system PJW08_09660 PF00270 DEAD/DEAH box helicase PJW08_09660 PF00570 HRDC domain PJW08_09660 PF16124 RecQ zinc-binding PJW08_09660 PF09382 RQC domain PJW08_09660 PF00271 Helicase conserved C-terminal domain PJW08_09670 PF00871 Acetokinase family PJW08_09675 PF01515 Phosphate acetyl/butaryl transferase PJW08_09705 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PJW08_09705 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PJW08_09710 PF13180 PDZ domain PJW08_09710 PF17820 PDZ domain PJW08_09725 PF02618 YceG-like family PJW08_09760 PF18496 Collagenase G catalytic helper subdomain PJW08_09760 PF01752 Collagenase PJW08_09760 PF08453 Peptidase family M9 N-terminal PJW08_09765 PF18496 Collagenase G catalytic helper subdomain PJW08_09765 PF08453 Peptidase family M9 N-terminal PJW08_09765 PF01752 Collagenase PJW08_09790 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PJW08_09800 PF03061 Thioesterase superfamily PJW08_09830 PF03167 Uracil DNA glycosylase superfamily PJW08_09845 PF02652 L-lactate permease PJW08_09855 PF00488 MutS domain V PJW08_09855 PF01713 Smr domain PJW08_09865 PF01554 MatE PJW08_09870 PF08534 Redoxin PJW08_09905 PF03060 Nitronate monooxygenase PJW08_09930 PF00085 Thioredoxin PJW08_09995 PF17440 Thiol-activated cytolysin beta sandwich domain PJW08_09995 PF01289 Thiol-activated cytolysin PJW08_10060 PF02678 Pirin PJW08_10060 PF05726 Pirin C-terminal cupin domain PJW08_10120 PF02384 N-6 DNA Methylase PJW08_10355 PF00253 Ribosomal protein S14p/S29e PJW08_10360 PF00673 ribosomal L5P family C-terminus PJW08_10360 PF00281 Ribosomal protein L5 PJW08_10365 PF00467 KOW motif PJW08_10365 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 PJW08_10375 PF00366 Ribosomal protein S17 PJW08_10380 PF00831 Ribosomal L29 protein PJW08_10385 PF00252 Ribosomal protein L16p/L10e PJW08_10390 PF00189 Ribosomal protein S3, C-terminal domain PJW08_10390 PF07650 KH domain PJW08_10400 PF00203 Ribosomal protein S19 PJW08_10410 PF00276 Ribosomal protein L23 PJW08_10420 PF00297 Ribosomal protein L3 PJW08_10435 PF00177 Ribosomal protein S7p/S5e PJW08_10440 PF00164 Ribosomal protein S12/S23 PJW08_10450 PF07715 TonB-dependent Receptor Plug Domain PJW08_10450 PF00593 TonB dependent receptor PJW08_10455 PF00593 TonB dependent receptor PJW08_10455 PF07715 TonB-dependent Receptor Plug Domain PJW08_10485 PF01694 Rhomboid family PJW08_10490 PF16193 AAA C-terminal domain PJW08_10490 PF12002 MgsA AAA+ ATPase C terminal PJW08_10490 PF00004 ATPase family associated with various cellular activities (AAA) PJW08_10510 PF04002 RadC-like JAB domain PJW08_10515 PF02254 TrkA-N domain PJW08_10515 PF02080 TrkA-C domain PJW08_10590 PF01494 FAD binding domain PJW08_10605 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PJW08_10605 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PJW08_10620 PF00282 Pyridoxal-dependent decarboxylase conserved domain PJW08_10715 PF00691 OmpA family PJW08_10715 PF01389 OmpA-like transmembrane domain PJW08_10775 PF05175 Methyltransferase small domain PJW08_10780 PF01645 Conserved region in glutamate synthase PJW08_10785 PF01197 Ribosomal protein L31 PJW08_10835 PF12833 Helix-turn-helix domain PJW08_10835 PF02311 AraC-like ligand binding domain PJW08_10845 PF03150 Di-haem cytochrome c peroxidase PJW08_10860 PF03741 Integral membrane protein TerC family PJW08_10860 PF03471 Transporter associated domain PJW08_10865 PF00210 Ferritin-like domain PJW08_10870 PF03466 LysR substrate binding domain PJW08_10870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PJW08_10885 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PJW08_10885 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PJW08_10955 PF02350 UDP-N-acetylglucosamine 2-epimerase PJW08_11030 PF00144 Beta-lactamase PJW08_11040 PF00933 Glycosyl hydrolase family 3 N terminal domain PJW08_11040 PF01915 Glycosyl hydrolase family 3 C-terminal domain PJW08_11130 PF03099 Biotin/lipoate A/B protein ligase family PJW08_11130 PF02237 Biotin protein ligase C terminal domain PJW08_11240 PF02875 Mur ligase family, glutamate ligase domain PJW08_11240 PF08245 Mur ligase middle domain PJW08_11240 PF01225 Mur ligase family, catalytic domain PJW08_11245 PF00465 Iron-containing alcohol dehydrogenase PJW08_11285 PF00082 Subtilase family PJW08_11290 PF04389 Peptidase family M28 PJW08_11305 PF02646 RmuC family PJW08_11310 PF12843 Putative quorum-sensing-regulated virulence factor PJW08_11390 PF00582 Universal stress protein family PJW08_11405 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase PJW08_11405 PF13746 4Fe-4S dicluster domain PJW08_11405 PF12801 4Fe-4S binding domain PJW08_11410 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP PJW08_11410 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PJW08_11410 PF00034 Cytochrome c PJW08_11445 PF00520 Ion transport protein PJW08_11445 PF00027 Cyclic nucleotide-binding domain PJW08_11455 PF02675 S-adenosylmethionine decarboxylase PJW08_11490 PF04012 PspA/IM30 family PJW08_11500 PF01381 Helix-turn-helix PJW08_11510 PF06969 HemN C-terminal domain PJW08_11510 PF04055 Radical SAM superfamily PJW08_11515 PF01791 DeoC/LacD family aldolase PJW08_11555 PF00466 Ribosomal protein L10 PJW08_11560 PF00687 Ribosomal protein L1p/L10e family PJW08_11565 PF03946 Ribosomal protein L11, N-terminal domain PJW08_11565 PF00298 Ribosomal protein L11, RNA binding domain PJW08_11585 PF03143 Elongation factor Tu C-terminal domain PJW08_11585 PF03144 Elongation factor Tu domain 2 PJW08_11585 PF00009 Elongation factor Tu GTP binding domain PJW08_11610 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein PJW08_11610 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus PJW08_11615 PF00589 Phage integrase family PJW08_11615 PF02899 Phage integrase, N-terminal SAM-like domain PJW08_11620 PF01165 Ribosomal protein S21 PJW08_11625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PJW08_11625 PF02770 Acyl-CoA dehydrogenase, middle domain PJW08_11625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PJW08_11635 PF01235 Sodium:alanine symporter family PJW08_11640 PF04321 RmlD substrate binding domain PJW08_11645 PF02080 TrkA-C domain PJW08_11690 PF03641 Possible lysine decarboxylase PJW08_11700 PF02779 Transketolase, pyrimidine binding domain PJW08_11700 PF02780 Transketolase, C-terminal domain PJW08_11710 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase PJW08_11710 PF00156 Phosphoribosyl transferase domain PJW08_11715 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family PJW08_11730 PF00474 Sodium:solute symporter family PJW08_11765 PF10417 C-terminal domain of 1-Cys peroxiredoxin PJW08_11765 PF00578 AhpC/TSA family PJW08_11770 PF00072 Response regulator receiver domain PJW08_11770 PF00158 Sigma-54 interaction domain PJW08_11770 PF02954 Bacterial regulatory protein, Fis family PJW08_11785 PF00005 ABC transporter PJW08_11785 PF13732 Domain of unknown function (DUF4162) PJW08_11800 PF02803 Thiolase, C-terminal domain PJW08_11800 PF00108 Thiolase, N-terminal domain PJW08_11815 PF02769 AIR synthase related protein, C-terminal domain PJW08_11815 PF00586 AIR synthase related protein, N-terminal domain PJW08_11840 PF01699 Sodium/calcium exchanger protein PJW08_11875 PF02617 ATP-dependent Clp protease adaptor protein ClpS PJW08_11900 PF00578 AhpC/TSA family PJW08_11910 PF00528 Binding-protein-dependent transport system inner membrane component PJW08_11940 PF00072 Response regulator receiver domain PJW08_11940 PF04397 LytTr DNA-binding domain PJW08_11960 PF17391 Urocanase N-terminal domain PJW08_11960 PF17392 Urocanase C-terminal domain PJW08_11960 PF01175 Urocanase Rossmann-like domain PJW08_11970 PF03466 LysR substrate binding domain PJW08_11970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PJW08_12000 PF00290 Tryptophan synthase alpha chain PJW08_12005 PF00291 Pyridoxal-phosphate dependent enzyme PJW08_12015 PF00218 Indole-3-glycerol phosphate synthase PJW08_12030 PF00117 Glutamine amidotransferase class-I PJW08_12040 PF13537 Glutamine amidotransferase domain PJW08_12040 PF00733 Asparagine synthase PJW08_12090 PF01979 Amidohydrolase family PJW08_12090 PF13382 Adenine deaminase C-terminal domain PJW08_12100 PF08281 Sigma-70, region 4 PJW08_12100 PF04542 Sigma-70 region 2 PJW08_12115 PF02405 Permease MlaE PJW08_12165 PF00877 NlpC/P60 family PJW08_12185 PF08534 Redoxin PJW08_12210 PF04286 Protein of unknown function (DUF445) PJW08_12215 PF12282 Signal transduction histidine kinase PJW08_12215 PF07568 Histidine kinase PJW08_12215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PJW08_12220 PF00486 Transcriptional regulatory protein, C terminal PJW08_12220 PF00072 Response regulator receiver domain PJW08_12225 PF00072 Response regulator receiver domain PJW08_12225 PF04397 LytTr DNA-binding domain PJW08_12230 PF01427 D-ala-D-ala dipeptidase PJW08_12245 PF00364 Biotin-requiring enzyme PJW08_12245 PF02817 e3 binding domain PJW08_12245 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PJW08_12325 PF11842 Domain of unknown function (DUF3362) PJW08_12325 PF08497 Radical SAM N-terminal PJW08_12325 PF04055 Radical SAM superfamily PJW08_12365 PF03588 Leucyl/phenylalanyl-tRNA protein transferase PJW08_12410 PF01272 Transcription elongation factor, GreA/GreB, C-term PJW08_12410 PF03449 Transcription elongation factor, N-terminal PJW08_12445 PF00731 AIR carboxylase PJW08_12465 PF00593 TonB dependent receptor PJW08_12465 PF07715 TonB-dependent Receptor Plug Domain PJW08_12535 PF09312 SurA N-terminal domain PJW08_12535 PF00639 PPIC-type PPIASE domain PJW08_12580 PF03309 Type III pantothenate kinase PJW08_12610 PF00132 Bacterial transferase hexapeptide (six repeats) PJW08_12620 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase PJW08_12620 PF05257 CHAP domain PJW08_12670 PF03781 Sulfatase-modifying factor enzyme 1 PJW08_12690 PF00158 Sigma-54 interaction domain PJW08_12690 PF01590 GAF domain PJW08_12690 PF02954 Bacterial regulatory protein, Fis family PJW08_12705 PF00166 Chaperonin 10 Kd subunit PJW08_12715 PF00348 Polyprenyl synthetase PJW08_12755 PF07690 Major Facilitator Superfamily PJW08_12765 PF04055 Radical SAM superfamily PJW08_12765 PF06969 HemN C-terminal domain PJW08_12770 PF02075 Crossover junction endodeoxyribonuclease RuvC PJW08_12775 PF01979 Amidohydrolase family PJW08_12775 PF13382 Adenine deaminase C-terminal domain PJW08_12815 PF02322 Cytochrome bd terminal oxidase subunit II PJW08_12825 PF00561 alpha/beta hydrolase fold PJW08_12830 PF05175 Methyltransferase small domain PJW08_12835 PF01266 FAD dependent oxidoreductase PJW08_12835 PF05430 S-adenosyl-L-methionine-dependent methyltransferase PJW08_12880 PF00117 Glutamine amidotransferase class-I PJW08_12880 PF03352 Methyladenine glycosylase PJW08_12880 PF13302 Acetyltransferase (GNAT) domain PJW08_12880 PF13673 Acetyltransferase (GNAT) domain PJW08_12880 PF00958 GMP synthase C terminal domain PJW08_12885 PF01343 Peptidase family S49 PJW08_12890 PF02773 S-adenosylmethionine synthetase, C-terminal domain PJW08_12890 PF02772 S-adenosylmethionine synthetase, central domain PJW08_12890 PF00438 S-adenosylmethionine synthetase, N-terminal domain PJW08_12895 PF00085 Thioredoxin PJW08_12945 PF05198 Translation initiation factor IF-3, N-terminal domain PJW08_12945 PF00707 Translation initiation factor IF-3, C-terminal domain PJW08_12950 PF01632 Ribosomal protein L35 PJW08_12980 PF01926 50S ribosome-binding GTPase PJW08_12980 PF01018 GTP1/OBG PJW08_12990 PF00877 NlpC/P60 family PJW08_12995 PF02684 Lipid-A-disaccharide synthetase PJW08_13000 PF01975 Survival protein SurE PJW08_13005 PF17804 Tail specific protease N-terminal domain PJW08_13005 PF03572 Peptidase family S41 PJW08_13005 PF00595 PDZ domain PJW08_13005 PF11818 C-terminal domain of tail specific protease (DUF3340) PJW08_13045 PF13567 Domain of unknown function (DUF4131) PJW08_13045 PF03772 Competence protein PJW08_13045 PF00753 Metallo-beta-lactamase superfamily PJW08_13105 PF00593 TonB dependent receptor PJW08_13105 PF07715 TonB-dependent Receptor Plug Domain PJW08_13110 PF00593 TonB dependent receptor PJW08_13110 PF07715 TonB-dependent Receptor Plug Domain PJW08_13170 PF02142 MGS-like domain PJW08_13170 PF01808 AICARFT/IMPCHase bienzyme PJW08_13180 PF04085 rod shape-determining protein MreC PJW08_13195 PF01098 Cell cycle protein PJW08_13245 PF00348 Polyprenyl synthetase PJW08_13265 PF02661 Fic/DOC family PJW08_13270 PF00677 Lumazine binding domain PJW08_13275 PF04166 Pyridoxal phosphate biosynthetic protein PdxA PJW08_13290 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PJW08_13290 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PJW08_13295 PF00364 Biotin-requiring enzyme PJW08_13365 PF00717 Peptidase S24-like PJW08_13370 PF13443 Cro/C1-type HTH DNA-binding domain PJW08_13380 PF01037 Lrp/AsnC ligand binding domain PJW08_13380 PF13404 AsnC-type helix-turn-helix domain PJW08_13395 PF17820 PDZ domain PJW08_13395 PF03572 Peptidase family S41 PJW08_13395 PF01471 Putative peptidoglycan binding domain PJW08_13400 PF04397 LytTr DNA-binding domain PJW08_13400 PF00072 Response regulator receiver domain PJW08_13410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PJW08_13410 PF00512 His Kinase A (phospho-acceptor) domain PJW08_13410 PF07689 KaiB domain PJW08_13425 PF01467 Cytidylyltransferase-like PJW08_13430 PF00625 Guanylate kinase PJW08_13435 PF08340 Domain of unknown function (DUF1732) PJW08_13435 PF03755 YicC-like family, N-terminal region PJW08_13450 PF02769 AIR synthase related protein, C-terminal domain PJW08_13450 PF00586 AIR synthase related protein, N-terminal domain PJW08_13460 PF01521 Iron-sulphur cluster biosynthesis PJW08_13470 PF00005 ABC transporter PJW08_13475 PF01458 Uncharacterized protein family (UPF0051) PJW08_13495 PF00528 Binding-protein-dependent transport system inner membrane component PJW08_13495 PF12911 N-terminal TM domain of oligopeptide transport permease C PJW08_13500 PF00924 Mechanosensitive ion channel PJW08_13505 PF00698 Acyl transferase domain PJW08_13515 PF16363 GDP-mannose 4,6 dehydratase PJW08_13540 PF01351 Ribonuclease HII PJW08_13550 PF03831 PhnA domain PJW08_13550 PF08274 PhnA Zinc-Ribbon PJW08_13555 PF01782 RimM N-terminal domain PJW08_13560 PF00886 Ribosomal protein S16 PJW08_13565 PF00313 'Cold-shock' DNA-binding domain PJW08_13600 PF02021 Uncharacterised protein family UPF0102 PJW08_13605 PF02016 LD-carboxypeptidase N-terminal domain PJW08_13605 PF17676 LD-carboxypeptidase C-terminal domain PJW08_13615 PF07715 TonB-dependent Receptor Plug Domain PJW08_13615 PF07660 Secretin and TonB N terminus short domain PJW08_13615 PF00593 TonB dependent receptor PJW08_13630 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) PJW08_13630 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 PJW08_13660 PF14622 Ribonuclease-III-like PJW08_13660 PF00035 Double-stranded RNA binding motif PJW08_13675 PF00551 Formyl transferase PJW08_13680 PF01693 Caulimovirus viroplasmin PJW08_13695 PF00924 Mechanosensitive ion channel PJW08_13695 PF05552 Conserved TM helix PJW08_13700 PF00814 Glycoprotease family PJW08_13715 PF04238 Protein of unknown function (DUF420) PJW08_13720 PF02630 SCO1/SenC PJW08_13735 PF00510 Cytochrome c oxidase subunit III PJW08_13740 PF00510 Cytochrome c oxidase subunit III PJW08_13775 PF01048 Phosphorylase superfamily PJW08_13795 PF00186 Dihydrofolate reductase PJW08_13825 PF02780 Transketolase, C-terminal domain PJW08_13825 PF02779 Transketolase, pyrimidine binding domain PJW08_13825 PF00364 Biotin-requiring enzyme PJW08_13840 PF00719 Inorganic pyrophosphatase PJW08_13845 PF00425 chorismate binding enzyme PJW08_13845 PF04715 Anthranilate synthase component I, N terminal region PJW08_13875 PF13335 Magnesium chelatase, subunit ChlI C-terminal PJW08_13875 PF01078 Magnesium chelatase, subunit ChlI PJW08_13880 PF08534 Redoxin PJW08_13890 PF00210 Ferritin-like domain PJW08_13935 PF18073 Rubredoxin metal binding domain PJW08_13945 PF02261 Aspartate decarboxylase PJW08_13955 PF00534 Glycosyl transferases group 1 PJW08_13955 PF08323 Starch synthase catalytic domain PJW08_14000 PF01235 Sodium:alanine symporter family PJW08_14030 PF01381 Helix-turn-helix PJW08_14095 PF00004 ATPase family associated with various cellular activities (AAA) PJW08_14095 PF17866 AAA lid domain PJW08_14100 PF00005 ABC transporter PJW08_14150 PF03009 Glycerophosphoryl diester phosphodiesterase family PJW08_14155 PF03606 C4-dicarboxylate anaerobic carrier PJW08_14165 PF00266 Aminotransferase class-V PJW08_14200 PF01842 ACT domain PJW08_14200 PF00696 Amino acid kinase family PJW08_14215 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PJW08_14215 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PJW08_14255 PF07992 Pyridine nucleotide-disulphide oxidoreductase PJW08_14255 PF00085 Thioredoxin PJW08_14295 PF00156 Phosphoribosyl transferase domain PJW08_14300 PF00398 Ribosomal RNA adenine dimethylase PJW08_14320 PF03129 Anticodon binding domain PJW08_14340 PF12823 Domain of unknown function (DUF3817) PJW08_14345 PF07715 TonB-dependent Receptor Plug Domain PJW08_14345 PF00593 TonB dependent receptor PJW08_14380 PF00916 Sulfate permease family PJW08_14380 PF01740 STAS domain PJW08_14385 PF17864 RuvB AAA lid domain PJW08_14385 PF05491 RuvB C-terminal winged helix domain PJW08_14385 PF05496 Holliday junction DNA helicase RuvB P-loop domain PJW08_14395 PF00116 Cytochrome C oxidase subunit II, periplasmic domain PJW08_14395 PF02790 Cytochrome C oxidase subunit II, transmembrane domain PJW08_14425 PF00037 4Fe-4S binding domain PJW08_14425 PF13247 4Fe-4S dicluster domain PJW08_14450 PF00571 CBS domain PJW08_14450 PF01595 Cyclin M transmembrane N-terminal domain PJW08_14470 PF01883 Iron-sulfur cluster assembly protein PJW08_14475 PF02657 Fe-S metabolism associated domain PJW08_14485 PF00156 Phosphoribosyl transferase domain PJW08_14520 PF00593 TonB dependent receptor PJW08_14520 PF07715 TonB-dependent Receptor Plug Domain PJW08_14535 PF03544 Gram-negative bacterial TonB protein C-terminal PJW08_14550 PF00271 Helicase conserved C-terminal domain PJW08_14550 PF00270 DEAD/DEAH box helicase PJW08_14555 PF00970 Oxidoreductase FAD-binding domain PJW08_14555 PF00175 Oxidoreductase NAD-binding domain PJW08_14555 PF00111 2Fe-2S iron-sulfur cluster binding domain PJW08_14565 PF02508 Rnf-Nqr subunit, membrane protein PJW08_14570 PF04205 FMN-binding domain PJW08_14580 PF11973 NQRA C-terminal domain PJW08_14580 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) PJW08_14590 PF04379 ApaG domain PJW08_14630 PF00145 C-5 cytosine-specific DNA methylase PJW08_14660 PF00270 DEAD/DEAH box helicase PJW08_14660 PF00271 Helicase conserved C-terminal domain PJW08_14665 PF03928 Haem-degrading PJW08_14675 PF02527 rRNA small subunit methyltransferase G PJW08_14700 PF01026 TatD related DNase PJW08_14705 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PJW08_14705 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PJW08_14710 PF14437 MafB19-like deaminase PJW08_14720 PF00593 TonB dependent receptor PJW08_14720 PF07715 TonB-dependent Receptor Plug Domain PJW08_14730 PF01882 Protein of unknown function DUF58 PJW08_14745 PF07584 Aerotolerance regulator N-terminal PJW08_14745 PF13519 von Willebrand factor type A domain PJW08_14785 PF06574 FAD synthetase PJW08_14785 PF01687 Riboflavin kinase PJW08_14810 PF00398 Ribosomal RNA adenine dimethylase PJW08_14825 PF00970 Oxidoreductase FAD-binding domain PJW08_14825 PF00111 2Fe-2S iron-sulfur cluster binding domain PJW08_14825 PF00175 Oxidoreductase NAD-binding domain PJW08_14845 PF02780 Transketolase, C-terminal domain PJW08_14845 PF02779 Transketolase, pyrimidine binding domain PJW08_14845 PF13292 1-deoxy-D-xylulose-5-phosphate synthase PJW08_14850 PF00231 ATP synthase PJW08_14860 PF00213 ATP synthase delta (OSCP) subunit PJW08_14865 PF00430 ATP synthase B/B' CF(0) PJW08_14905 PF01476 LysM domain PJW08_14905 PF00877 NlpC/P60 family PJW08_14910 PF03372 Endonuclease/Exonuclease/phosphatase family PJW08_14920 PF01144 Coenzyme A transferase PJW08_14925 PF01144 Coenzyme A transferase PJW08_14935 PF14109 GldH lipoprotein PJW08_14975 PF00270 DEAD/DEAH box helicase PJW08_14975 PF00271 Helicase conserved C-terminal domain PJW08_14985 PF08443 RimK-like ATP-grasp domain PJW08_14985 PF18030 RimK PreATP-grasp domain PJW08_14990 PF02152 Dihydroneopterin aldolase PJW08_15010 PF00753 Metallo-beta-lactamase superfamily PJW08_15050 PF04231 Endonuclease I PJW08_15055 PF04151 Bacterial pre-peptidase C-terminal domain PJW08_15055 PF04389 Peptidase family M28 PJW08_15085 PF00085 Thioredoxin PJW08_15095 PF00005 ABC transporter PJW08_15095 PF08402 TOBE domain PJW08_15100 PF09844 Uncharacterized conserved protein (COG2071) PJW08_15180 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PJW08_15180 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus PJW08_15220 PF00072 Response regulator receiver domain PJW08_15220 PF04397 LytTr DNA-binding domain PJW08_15235 PF00849 RNA pseudouridylate synthase PJW08_15245 PF13673 Acetyltransferase (GNAT) domain PJW08_15250 PF02502 Ribose/Galactose Isomerase