locus-tag	class	description
PJW08_00210	COG3209	COG3209 Rhs family protein
PJW08_00225	COG3209	COG3209 Rhs family protein
PJW08_00225	COG4104	PAAR repeat-containing protein
PJW08_00235	COG3209	COG3209 Rhs family protein
PJW08_00235	COG4104	PAAR repeat-containing protein
PJW08_00245	COG3209	COG3209 Rhs family protein
PJW08_00245	COG4104	PAAR repeat-containing protein
PJW08_00255	COG3209	COG3209 Rhs family protein
PJW08_00265	COG3209	COG3209 Rhs family protein
PJW08_00275	COG3209	COG3209 Rhs family protein
PJW08_00525	COG4974	Belongs to the 'phage' integrase family
PJW08_00570	COG4974	Belongs to the 'phage' integrase family
PJW08_00645	COG5433	transposase activity
PJW08_00730	COG1192	Involved in chromosome partitioning
PJW08_00815	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PJW08_00845	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PJW08_00855	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PJW08_00880	COG0420	3'-5' exonuclease activity
PJW08_00885	COG0419	ATPase involved in DNA repair
PJW08_00920	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PJW08_00925	COG0697	spore germination
PJW08_00940	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PJW08_00940	COG0758	DNA mediated transformation
PJW08_00970	COG0746	molybdenum cofactor guanylyltransferase activity
PJW08_00975	COG0315	cyclic pyranopterin monophosphate synthase activity
PJW08_00980	COG0303	'Molybdopterin
PJW08_00985	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
PJW08_00990	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
PJW08_01015	COG0322	excinuclease ABC activity
PJW08_01020	COG1752	Esterase of the alpha-beta hydrolase superfamily
PJW08_01025	COG1530	ribonuclease E activity
PJW08_01030	COG0776	regulation of translation
PJW08_01060	COG1629	transport
PJW08_01060	COG4206	TonB-dependent receptor
PJW08_01065	COG4771	TonB-dependent receptor
PJW08_01115	COG0612	Peptidase, M16
PJW08_01130	COG0211	Belongs to the bacterial ribosomal protein bL27 family
PJW08_01135	COG3279	Response regulator of the LytR AlgR family
PJW08_01140	COG0745	RESPONSE REGULATOR receiver
PJW08_01140	COG2972	Histidine kinase
PJW08_01150	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PJW08_01165	COG5000	phosphorelay sensor kinase activity
PJW08_01195	COG1114	Component of the transport system for branched-chain amino acids
PJW08_01210	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PJW08_01225	COG0220	tRNA (guanine-N7-)-methyltransferase activity
PJW08_01255	COG0492	ferredoxin-NADP+ reductase activity
PJW08_01270	COG2116	formate transmembrane transporter activity
PJW08_01275	COG0716	FMN binding
PJW08_01310	COG4774	siderophore transport
PJW08_01315	COG1607	acyl-coa hydrolase
PJW08_01320	COG0628	permease
PJW08_01345	COG1210	Utp--glucose-1-phosphate uridylyltransferase
PJW08_01360	COG4733	cellulase activity
PJW08_01360	COG5297	Belongs to the glycosyl hydrolase family 6
PJW08_01400	COG5002	protein histidine kinase activity
PJW08_01415	COG0793	Belongs to the peptidase S41A family
PJW08_01420	COG0594	ribonuclease P activity
PJW08_01440	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PJW08_01460	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
PJW08_01465	COG0193	aminoacyl-tRNA hydrolase activity
PJW08_01495	COG0534	Mate efflux family protein
PJW08_01500	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PJW08_01505	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PJW08_01510	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PJW08_01515	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PJW08_01530	COG4585	Histidine kinase
PJW08_01540	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PJW08_01565	COG3483	tryptophan 2,3-dioxygenase activity
PJW08_01575	COG0739	heme binding
PJW08_01585	COG4771	TonB-dependent receptor
PJW08_01625	COG0314	molybdopterin synthase activity
PJW08_01630	COG0126	phosphoglycerate kinase activity
PJW08_01680	COG1272	protein, Hemolysin III
PJW08_01685	COG2954	triphosphatase activity
PJW08_01755	COG0840	transmembrane signaling receptor activity
PJW08_01765	COG0840	transmembrane signaling receptor activity
PJW08_01775	COG0632	four-way junction helicase activity
PJW08_01800	COG0509	glycine decarboxylation via glycine cleavage system
PJW08_01825	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
PJW08_01855	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PJW08_01880	COG1858	cytochrome C peroxidase
PJW08_01890	COG4771	TonB-dependent receptor
PJW08_01925	COG0495	leucyl-tRNA aminoacylation
PJW08_01940	COG1946	Acyl-CoA thioesterase
PJW08_01960	COG1970	mechanosensitive ion channel activity
PJW08_01970	COG1435	thymidine kinase activity
PJW08_02000	COG0779	Required for maturation of 30S ribosomal subunits
PJW08_02175	COG4771	TonB-dependent receptor
PJW08_02185	COG0803	Belongs to the bacterial solute-binding protein 9 family
PJW08_02190	COG1121	(ABC) transporter
PJW08_02195	COG1108	ABC-type Mn2 Zn2 transport systems permease components
PJW08_02200	COG1108	ABC-type Mn2 Zn2 transport systems permease components
PJW08_02205	COG1074	ATP-dependent DNA helicase activity
PJW08_02240	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PJW08_02250	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
PJW08_02255	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PJW08_02280	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
PJW08_02290	COG0156	8-amino-7-oxononanoate synthase activity
PJW08_02310	COG0508	dehydrogenase complex catalyzes the overall conversion of
PJW08_02320	COG0564	pseudouridine synthase activity
PJW08_02325	COG0218	Necessary for normal cell division and for the maintenance of normal septation
PJW08_02335	COG2001	Belongs to the MraZ family
PJW08_02340	COG0275	rRNA processing
PJW08_02355	COG0768	penicillin binding
PJW08_02360	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PJW08_02365	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PJW08_02380	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PJW08_02400	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PJW08_02405	COG1610	YqeY-like protein
PJW08_02420	COG0517	IMP dehydrogenase activity
PJW08_02430	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PJW08_02435	COG1595	DNA-templated transcription, initiation
PJW08_02440	COG1595	DNA-templated transcription, initiation
PJW08_02460	COG2226	methyltransferase
PJW08_02465	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
PJW08_02500	COG0268	Binds directly to 16S ribosomal RNA
PJW08_02525	COG1968	undecaprenyl-diphosphatase activity
PJW08_02535	COG2177	Part of the ABC transporter FtsEX involved in
PJW08_02540	COG0346	lactoylglutathione lyase activity
PJW08_02545	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PJW08_02570	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PJW08_02585	COG0431	NADPH-dependent FMN reductase
PJW08_02605	COG4771	TonB-dependent receptor
PJW08_02625	COG0811	peptide transport
PJW08_02635	COG0848	biopolymer transport protein
PJW08_02675	COG0233	cytoplasmic translational termination
PJW08_02680	COG0528	UMP kinase activity
PJW08_02685	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PJW08_02790	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
PJW08_02820	COG0386	Belongs to the glutathione peroxidase family
PJW08_02830	COG0415	Belongs to the DNA photolyase family
PJW08_02850	COG4206	TonB-dependent receptor
PJW08_02850	COG1629	transport
PJW08_02900	COG2363	Small membrane protein
PJW08_02915	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PJW08_02920	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PJW08_02990	COG2423	ornithine cyclodeaminase activity
PJW08_03000	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
PJW08_03005	COG1715	Restriction endonuclease
PJW08_03030	COG0006	proline dipeptidase activity
PJW08_03070	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
PJW08_03110	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
PJW08_03120	COG1950	PFAM Membrane protein of
PJW08_03150	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
PJW08_03170	COG0784	Response regulator, receiver
PJW08_03170	COG0835	chemotaxis
PJW08_03175	COG2197	response regulator
PJW08_03195	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PJW08_03200	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PJW08_03205	COG0191	fructose-bisphosphate aldolase activity
PJW08_03220	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PJW08_03260	COG0321	lipoyl(octanoyl) transferase activity
PJW08_03300	COG1490	D-aminoacyl-tRNA deacylase activity
PJW08_03305	COG1162	GTPase activity
PJW08_03310	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
PJW08_03315	COG1605	Chorismate mutase
PJW08_03315	COG0287	Prephenate dehydrogenase
PJW08_03410	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PJW08_03415	COG0101	tRNA pseudouridine synthase activity
PJW08_03425	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
PJW08_03435	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
PJW08_03440	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
PJW08_03445	COG0811	peptide transport
PJW08_03460	COG0285	dihydrofolate synthase activity
PJW08_03515	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
PJW08_03535	COG1086	Polysaccharide biosynthesis protein
PJW08_03580	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PJW08_03615	COG0295	cytidine deaminase activity
PJW08_03630	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
PJW08_03650	COG0688	phosphatidylethanolamine metabolic process
PJW08_03695	COG2207	Transcriptional regulator
PJW08_03695	COG1917	Cupin 2, conserved barrel domain protein
PJW08_03715	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PJW08_03730	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
PJW08_03735	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PJW08_03750	COG0101	tRNA pseudouridine synthase activity
PJW08_03760	COG4585	Histidine kinase
PJW08_03790	COG2197	response regulator
PJW08_03815	COG2315	Protein conserved in bacteria
PJW08_03825	COG0492	ferredoxin-NADP+ reductase activity
PJW08_03835	COG2866	Carboxypeptidase
PJW08_03840	COG2866	Carboxypeptidase
PJW08_03860	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
PJW08_03860	COG2885	chlorophyll binding
PJW08_03890	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
PJW08_03920	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PJW08_03925	COG0671	phosphoesterase, PA-phosphatase related
PJW08_03935	COG3512	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PJW08_03960	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
PJW08_04100	COG1678	Uncharacterized ACR, COG1678
PJW08_04105	COG3279	Response regulator of the LytR AlgR family
PJW08_04110	COG2972	Histidine kinase
PJW08_04125	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
PJW08_04145	COG4771	TonB-dependent receptor
PJW08_04165	COG1595	DNA-templated transcription, initiation
PJW08_04170	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PJW08_04175	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
PJW08_04190	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
PJW08_04210	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
PJW08_04215	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
PJW08_04220	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
PJW08_04235	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
PJW08_04275	COG1104	cysteine desulfurase activity
PJW08_04290	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PJW08_04295	COG1663	tetraacyldisaccharide 4'-kinase activity
PJW08_04300	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
PJW08_04305	COG1136	(ABC) transporter
PJW08_04390	COG1278	Cold shock
PJW08_04395	COG1278	Cold shock
PJW08_04400	COG1278	Cold shock
PJW08_04405	COG4895	conserved protein (DUF2196)
PJW08_04425	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PJW08_04440	COG2329	Antibiotic biosynthesis monooxygenase
PJW08_04445	COG4166	transmembrane transport
PJW08_04475	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
PJW08_04510	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PJW08_04520	COG2996	Protein conserved in bacteria
PJW08_04540	COG1058	Belongs to the CinA family
PJW08_04540	COG1546	Belongs to the CinA family
PJW08_04545	COG0227	Belongs to the bacterial ribosomal protein bL28 family
PJW08_04550	COG0267	Belongs to the bacterial ribosomal protein bL33 family
PJW08_04560	COG0552	protein localization to endoplasmic reticulum
PJW08_04575	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PJW08_04645	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
PJW08_04665	COG0156	8-amino-7-oxononanoate synthase activity
PJW08_04765	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
PJW08_04775	COG1482	cell wall glycoprotein biosynthetic process
PJW08_04785	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
PJW08_04830	COG0321	lipoyl(octanoyl) transferase activity
PJW08_04830	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
PJW08_04845	COG1760	l-serine dehydratase
PJW08_04870	COG0205	6-phosphofructokinase activity
PJW08_04880	COG0251	oxidation-reduction process
PJW08_04890	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
PJW08_04900	COG0860	N-Acetylmuramoyl-L-alanine amidase
PJW08_04910	COG2181	nitrate reductase activity
PJW08_04910	COG0247	lactate metabolic process
PJW08_04915	COG2181	nitrate reductase activity
PJW08_04915	COG0247	lactate metabolic process
PJW08_04925	COG1575	Belongs to the MenA family. Type 1 subfamily
PJW08_04940	COG4948	Mandelate Racemase Muconate Lactonizing
PJW08_04945	COG1266	CAAX protease self-immunity
PJW08_04960	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PJW08_04975	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PJW08_04980	COG1841	ribosomal large subunit assembly
PJW08_04985	COG0200	Binds to the 23S rRNA
PJW08_04995	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PJW08_05000	COG0257	Belongs to the bacterial ribosomal protein bL36 family
PJW08_05005	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PJW08_05025	COG0203	ribosomal protein L17
PJW08_05035	COG4206	TonB-dependent receptor
PJW08_05035	COG1629	transport
PJW08_05075	COG0612	Peptidase, M16
PJW08_05090	COG0010	Belongs to the arginase family
PJW08_05095	COG2104	thiamine diphosphate biosynthetic process
PJW08_05115	COG0352	thiamine-phosphate diphosphorylase activity
PJW08_05150	COG0300	oxidoreductase activity
PJW08_05170	COG1120	ATPase activity
PJW08_05180	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PJW08_05190	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PJW08_05205	COG1295	ribonuclease BN
PJW08_05220	COG1629	transport
PJW08_05225	COG4771	TonB-dependent receptor
PJW08_05305	COG1132	(ABC) transporter
PJW08_05315	COG1169	isochorismate synthase
PJW08_05320	COG2050	protein possibly involved in aromatic compounds catabolism
PJW08_05330	COG0009	L-threonylcarbamoyladenylate synthase
PJW08_05350	COG0488	(ABC) transporter
PJW08_05380	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PJW08_05420	COG1418	mRNA catabolic process
PJW08_05485	COG0336	Belongs to the RNA methyltransferase TrmD family
PJW08_05500	COG2195	Cleaves the N-terminal amino acid of tripeptides
PJW08_05505	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PJW08_05515	COG1981	membrane
PJW08_05530	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
PJW08_05545	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
PJW08_05560	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
PJW08_05590	COG1090	epimerase
PJW08_05605	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PJW08_05605	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PJW08_05620	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
PJW08_05625	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PJW08_05635	COG0590	tRNA wobble adenosine to inosine editing
PJW08_05680	COG0230	Belongs to the bacterial ribosomal protein bL34 family
PJW08_05720	COG4628	conserved protein (DUF2132)
PJW08_05745	COG1408	metallophosphoesterase
PJW08_05790	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
PJW08_05800	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
PJW08_05810	COG2087	Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate
PJW08_05815	COG4206	TonB-dependent receptor
PJW08_05830	COG1136	(ABC) transporter
PJW08_05850	COG0404	The glycine cleavage system catalyzes the degradation of glycine
PJW08_05855	COG4628	conserved protein (DUF2132)
PJW08_05865	COG1028	Short-chain dehydrogenase reductase Sdr
PJW08_05870	COG3956	TIGRFAM MazG family protein
PJW08_05880	COG0242	peptide deformylase activity
PJW08_05885	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PJW08_05890	COG2171	N-acyltransferase activity
PJW08_05920	COG0009	L-threonylcarbamoyladenylate synthase
PJW08_05940	COG1132	(ABC) transporter
PJW08_05950	COG0463	Glycosyl transferase, family 2
PJW08_05975	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
PJW08_05990	COG1183	phosphatidylcholine synthase activity
PJW08_05995	COG1137	ATPase activity
PJW08_06005	COG0805	protein transport
PJW08_06030	COG0686	Belongs to the AlaDH PNT family
PJW08_06050	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PJW08_06055	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
PJW08_06055	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
PJW08_06060	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PJW08_06075	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
PJW08_06105	COG2096	Adenosyltransferase
PJW08_06110	COG1797	cobyrinic acid a,c-diamide synthase activity
PJW08_06115	COG1239	Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX
PJW08_06125	COG1239	Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX
PJW08_06135	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
PJW08_06160	COG0778	Nitroreductase
PJW08_06190	COG1648	precorrin-2 dehydrogenase activity
PJW08_06190	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
PJW08_06235	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PJW08_06240	COG1492	cobalamin metabolic process
PJW08_06275	COG3002	Belongs to the UPF0753 family
PJW08_06285	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
PJW08_06290	COG0659	secondary active sulfate transmembrane transporter activity
PJW08_06300	COG0732	type I restriction modification DNA specificity domain
PJW08_06375	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PJW08_06440	COG1401	restriction endodeoxyribonuclease activity
PJW08_06470	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
PJW08_06490	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
PJW08_06610	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PJW08_06675	COG2885	chlorophyll binding
PJW08_06700	COG2373	Large extracellular alpha-helical protein
PJW08_06750	COG1959	2 iron, 2 sulfur cluster binding
PJW08_06760	COG0175	sulfate reduction
PJW08_06780	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
PJW08_06780	COG1648	precorrin-2 dehydrogenase activity
PJW08_06785	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
PJW08_06785	COG1648	precorrin-2 dehydrogenase activity
PJW08_06790	COG0492	ferredoxin-NADP+ reductase activity
PJW08_06795	COG1045	serine acetyltransferase
PJW08_06815	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
PJW08_06835	COG0066	3-isopropylmalate dehydratase activity
PJW08_06860	COG0028	Belongs to the TPP enzyme family
PJW08_06875	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
PJW08_06885	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
PJW08_06920	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PJW08_06930	COG0360	Binds together with S18 to 16S ribosomal RNA
PJW08_06935	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PJW08_06950	COG2195	Cleaves the N-terminal amino acid of tripeptides
PJW08_06990	COG0438	transferase activity, transferring glycosyl groups
PJW08_06995	COG1250	3-hydroxyacyl-CoA dehydrogenase
PJW08_07010	COG0673	inositol 2-dehydrogenase activity
PJW08_07015	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
PJW08_07030	COG0813	purine-nucleoside phosphorylase activity
PJW08_07095	COG0668	transmembrane transport
PJW08_07105	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
PJW08_07105	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PJW08_07125	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PJW08_07165	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
PJW08_07215	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PJW08_07220	COG0484	heat shock protein binding
PJW08_07240	COG1028	Short-chain dehydrogenase reductase Sdr
PJW08_07265	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PJW08_07275	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
PJW08_07295	COG3958	Transketolase
PJW08_07300	COG0424	maF-like protein
PJW08_07310	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
PJW08_07315	COG3047	cAMP biosynthetic process
PJW08_07320	COG0542	response to heat
PJW08_07340	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PJW08_07380	COG1278	Cold shock
PJW08_07390	COG1278	Cold shock
PJW08_07405	COG1979	alcohol dehydrogenase
PJW08_07415	COG1309	transcriptional regulator
PJW08_07425	COG4585	Histidine kinase
PJW08_07450	COG1522	sequence-specific DNA binding
PJW08_07495	COG0564	pseudouridine synthase activity
PJW08_07500	COG1522	sequence-specific DNA binding
PJW08_07540	COG1739	Uncharacterized protein family UPF0029
PJW08_07550	COG1011	Hydrolase
PJW08_07555	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PJW08_07555	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PJW08_07580	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
PJW08_07635	COG0167	dihydroorotate dehydrogenase activity
PJW08_07650	COG2356	endonuclease I
PJW08_07710	COG0488	(ABC) transporter
PJW08_07770	COG1607	acyl-coa hydrolase
PJW08_07800	COG4771	TonB-dependent receptor
PJW08_07875	COG0668	transmembrane transport
PJW08_07895	COG3005	denitrification pathway
PJW08_07905	COG1333	cytochrome c biogenesis protein
PJW08_07905	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
PJW08_07910	COG1333	cytochrome c biogenesis protein
PJW08_07910	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
PJW08_07985	COG1477	protein flavinylation
PJW08_07990	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
PJW08_08040	COG3842	ATPase activity
PJW08_08085	COG1840	ABC-type Fe3 transport system, periplasmic component
PJW08_08155	COG0436	Aminotransferase
PJW08_08185	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
PJW08_08220	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PJW08_08230	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PJW08_08230	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PJW08_08295	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PJW08_08350	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
PJW08_08370	COG0514	ATP-dependent DNA helicase (RecQ)
PJW08_08395	COG2249	NAD(P)H dehydrogenase (quinone) activity
PJW08_08400	COG0116	Belongs to the methyltransferase superfamily
PJW08_08420	COG0825	malonyl-CoA metabolic process
PJW08_08440	COG1187	pseudouridine synthase activity
PJW08_08570	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
PJW08_08590	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PJW08_08595	COG1482	cell wall glycoprotein biosynthetic process
PJW08_08655	COG3279	Response regulator of the LytR AlgR family
PJW08_08665	COG2205	protein histidine kinase activity
PJW08_08690	COG0784	Response regulator, receiver
PJW08_08710	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
PJW08_08740	COG0243	molybdopterin cofactor binding
PJW08_08745	COG0243	molybdopterin cofactor binding
PJW08_08750	COG0243	molybdopterin cofactor binding
PJW08_08770	COG0437	4 iron, 4 sulfur cluster binding
PJW08_08790	COG3012	SEC-C Motif Domain Protein
PJW08_08800	COG0083	homoserine kinase activity
PJW08_08865	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PJW08_08895	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PJW08_08930	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PJW08_08945	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PJW08_08950	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PJW08_08955	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
PJW08_08975	COG1228	amidohydrolase
PJW08_08990	COG0010	Belongs to the arginase family
PJW08_09025	COG3279	Response regulator of the LytR AlgR family
PJW08_09030	COG2972	Histidine kinase
PJW08_09050	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PJW08_09055	COG1393	Belongs to the ArsC family
PJW08_09075	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
PJW08_09105	COG1528	Iron-storage protein
PJW08_09110	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PJW08_09130	COG4974	Belongs to the 'phage' integrase family
PJW08_09260	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
PJW08_09270	COG2815	serine threonine protein kinase
PJW08_09270	COG0515	serine threonine protein kinase
PJW08_09405	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
PJW08_09410	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
PJW08_09430	COG2226	methyltransferase
PJW08_09605	COG2161	toxin-antitoxin pair type II binding
PJW08_09610	COG4115	mRNA cleavage
PJW08_09660	COG0514	ATP-dependent DNA helicase (RecQ)
PJW08_09675	COG0280	phosphate acetyltransferase
PJW08_09710	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PJW08_09725	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PJW08_09790	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PJW08_09800	COG0824	Thioesterase
PJW08_09830	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PJW08_09845	COG1620	l-lactate permease
PJW08_09865	COG0534	Mate efflux family protein
PJW08_09870	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PJW08_09915	COG0482	sulfurtransferase activity
PJW08_09930	COG3118	belongs to the thioredoxin family
PJW08_10355	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PJW08_10360	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PJW08_10365	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PJW08_10375	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PJW08_10380	COG0255	Belongs to the universal ribosomal protein uL29 family
PJW08_10385	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PJW08_10390	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PJW08_10400	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PJW08_10410	COG0089	rRNA binding
PJW08_10420	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PJW08_10435	COG0049	tRNA binding
PJW08_10440	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PJW08_10450	COG1629	transport
PJW08_10455	COG4771	TonB-dependent receptor
PJW08_10490	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
PJW08_10510	COG2003	Belongs to the UPF0758 family
PJW08_10515	COG0569	domain protein
PJW08_10590	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
PJW08_10605	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
PJW08_10620	COG0076	glutamate decarboxylase activity
PJW08_10780	COG0069	glutamate synthase activity
PJW08_10785	COG0254	rRNA binding
PJW08_10800	COG1028	Short-chain dehydrogenase reductase Sdr
PJW08_10835	COG2207	Transcriptional regulator
PJW08_10835	COG1917	Cupin 2, conserved barrel domain protein
PJW08_10845	COG1858	cytochrome C peroxidase
PJW08_10860	COG1253	flavin adenine dinucleotide binding
PJW08_10865	COG0783	Belongs to the Dps family
PJW08_10870	COG0583	DNA-binding transcription factor activity
PJW08_10885	COG0540	Belongs to the ATCase OTCase family
PJW08_11030	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
PJW08_11040	COG1472	Belongs to the glycosyl hydrolase 3 family
PJW08_11130	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
PJW08_11130	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
PJW08_11135	COG0799	negative regulation of ribosome biogenesis
PJW08_11150	COG4589	Belongs to the CDS family
PJW08_11240	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
PJW08_11285	COG1404	Belongs to the peptidase S8 family
PJW08_11290	COG2234	aminopeptidase activity
PJW08_11310	COG3530	Putative quorum-sensing-regulated virulence factor
PJW08_11350	COG2072	flavoprotein involved in K transport
PJW08_11390	COG0589	response to stress
PJW08_11405	COG0348	domain, Protein
PJW08_11445	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
PJW08_11455	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
PJW08_11465	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
PJW08_11490	COG1842	Phage shock protein A
PJW08_11500	COG1396	sequence-specific DNA binding
PJW08_11510	COG0635	Involved in the biosynthesis of porphyrin-containing compound
PJW08_11515	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PJW08_11555	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PJW08_11560	COG0081	regulation of translation
PJW08_11565	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PJW08_11585	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PJW08_11615	COG4974	Belongs to the 'phage' integrase family
PJW08_11620	COG0828	Belongs to the bacterial ribosomal protein bS21 family
PJW08_11625	COG1960	acyl-CoA dehydrogenase activity
PJW08_11635	COG1115	amino acid carrier protein
PJW08_11645	COG0490	domain, Protein
PJW08_11690	COG1611	Belongs to the LOG family
PJW08_11710	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PJW08_11730	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PJW08_11765	COG0450	alkyl hydroperoxide reductase
PJW08_11785	COG4152	abc transporter atp-binding protein
PJW08_11800	COG0183	Belongs to the thiolase family
PJW08_11815	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
PJW08_11875	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
PJW08_11900	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
PJW08_11910	COG0601	transmembrane transport
PJW08_11940	COG3279	Response regulator of the LytR AlgR family
PJW08_11960	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
PJW08_11970	COG0583	DNA-binding transcription factor activity
PJW08_12000	COG0159	tryptophan synthase activity
PJW08_12005	COG0133	tryptophan synthase activity
PJW08_12015	COG0134	indole-3-glycerol-phosphate synthase activity
PJW08_12030	COG0512	Glutamine amidotransferase of anthranilate synthase
PJW08_12040	COG0367	asparagine synthase
PJW08_12100	COG1595	DNA-templated transcription, initiation
PJW08_12115	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
PJW08_12165	COG0791	NLP P60 protein
PJW08_12185	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
PJW08_12210	COG2733	membrane
PJW08_12325	COG1032	radical SAM domain protein
PJW08_12365	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
PJW08_12410	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
PJW08_12445	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PJW08_12580	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
PJW08_12610	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
PJW08_12620	COG3942	CHAP domain
PJW08_12620	COG1705	Flagellar rod assembly protein muramidase FlgJ
PJW08_12670	COG1262	PFAM Formylglycine-generating sulfatase enzyme
PJW08_12690	COG3604	Transcriptional regulator
PJW08_12705	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PJW08_12755	COG2814	Major facilitator Superfamily
PJW08_12765	COG0635	Involved in the biosynthesis of porphyrin-containing compound
PJW08_12770	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
PJW08_12775	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
PJW08_12805	COG1943	Transposase
PJW08_12815	COG1294	oxidase, subunit
PJW08_12825	COG2267	carboxylic ester hydrolase activity
PJW08_12830	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
PJW08_12835	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
PJW08_12835	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
PJW08_12880	COG0519	Catalyzes the synthesis of GMP from XMP
PJW08_12885	COG0616	signal peptide processing
PJW08_12890	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PJW08_12945	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PJW08_12950	COG0291	Belongs to the bacterial ribosomal protein bL35 family
PJW08_12980	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PJW08_12990	COG0791	NLP P60 protein
PJW08_12995	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PJW08_13000	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
PJW08_13005	COG0793	Belongs to the peptidase S41A family
PJW08_13045	COG0658	competence protein
PJW08_13045	COG2333	competence protein COMEC
PJW08_13105	COG1629	transport
PJW08_13105	COG4206	TonB-dependent receptor
PJW08_13110	COG4771	TonB-dependent receptor
PJW08_13170	COG0138	bifunctional purine biosynthesis protein purh
PJW08_13175	COG1077	Cell shape determining protein MreB Mrl
PJW08_13195	COG0772	Belongs to the SEDS family
PJW08_13275	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
PJW08_13290	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PJW08_13295	COG0511	ligase activity, forming carbon-carbon bonds
PJW08_13365	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PJW08_13370	COG3655	Transcriptional regulator
PJW08_13380	COG1522	sequence-specific DNA binding
PJW08_13395	COG0793	Belongs to the peptidase S41A family
PJW08_13395	COG3409	Peptidoglycan-binding domain 1 protein
PJW08_13410	COG2205	protein histidine kinase activity
PJW08_13425	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PJW08_13430	COG0194	GDP metabolic process
PJW08_13435	COG1561	YicC-like family, N-terminal region
PJW08_13450	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
PJW08_13460	COG0316	Belongs to the HesB IscA family
PJW08_13470	COG0396	ATPase activity
PJW08_13475	COG0719	Fe-S assembly protein
PJW08_13495	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PJW08_13500	COG0668	transmembrane transport
PJW08_13505	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
PJW08_13515	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
PJW08_13540	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PJW08_13550	COG2824	Alkylphosphonate utilization operon protein PhnA
PJW08_13555	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PJW08_13560	COG0228	four-way junction DNA binding
PJW08_13565	COG1278	Cold shock
PJW08_13600	COG0792	nuclease activity
PJW08_13605	COG1619	proteins homologs of microcin C7 resistance protein MccF
PJW08_13630	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PJW08_13660	COG0571	ribonuclease III activity
PJW08_13680	COG3341	Caulimovirus viroplasmin
PJW08_13680	COG0328	RNA-DNA hybrid ribonuclease activity
PJW08_13695	COG0668	transmembrane transport
PJW08_13700	COG1214	PFAM Peptidase M22, glycoprotease
PJW08_13715	COG2322	membrane
PJW08_13720	COG1999	signal sequence binding
PJW08_13735	COG1845	cytochrome c oxidase, subunit III
PJW08_13740	COG1845	cytochrome c oxidase, subunit III
PJW08_13795	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PJW08_13825	COG0508	dehydrogenase complex catalyzes the overall conversion of
PJW08_13825	COG0022	dehydrogenase e1 component
PJW08_13840	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
PJW08_13845	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PJW08_13875	COG0606	chelatase, subunit chli
PJW08_13880	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
PJW08_13890	COG1528	Iron-storage protein
PJW08_13935	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PJW08_13945	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
PJW08_13955	COG0297	glycogen (starch) synthase activity
PJW08_14000	COG1115	amino acid carrier protein
PJW08_14030	COG1476	TRANSCRIPTIONal
PJW08_14095	COG0464	growth
PJW08_14150	COG0584	glycerophosphoryl diester phosphodiesterase
PJW08_14155	COG1288	antiporter activity
PJW08_14165	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PJW08_14200	COG0527	aspartate kinase activity
PJW08_14255	COG3118	belongs to the thioredoxin family
PJW08_14255	COG0492	ferredoxin-NADP+ reductase activity
PJW08_14295	COG1040	competence protein
PJW08_14300	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
PJW08_14320	COG0423	glycine-tRNA ligase activity
PJW08_14340	COG2814	Major facilitator Superfamily
PJW08_14385	COG2255	four-way junction helicase activity
PJW08_14395	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
PJW08_14425	COG0437	4 iron, 4 sulfur cluster binding
PJW08_14450	COG1253	flavin adenine dinucleotide binding
PJW08_14470	COG2151	metal-sulfur cluster biosynthetic enzyme
PJW08_14475	COG2166	iron-sulfur cluster assembly
PJW08_14485	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PJW08_14520	COG4771	TonB-dependent receptor
PJW08_14535	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PJW08_14550	COG0513	Belongs to the DEAD box helicase family
PJW08_14565	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PJW08_14570	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PJW08_14580	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PJW08_14590	COG2967	ApaG domain
PJW08_14660	COG0513	Belongs to the DEAD box helicase family
PJW08_14675	COG0357	Ribosomal RNA small subunit methyltransferase G
PJW08_14700	COG0084	hydrolase, TatD family'
PJW08_14710	COG0590	tRNA wobble adenosine to inosine editing
PJW08_14745	COG2304	oxidoreductase activity
PJW08_14785	COG0196	riboflavin kinase activity
PJW08_14810	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
PJW08_14825	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
PJW08_14845	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PJW08_14850	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PJW08_14860	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PJW08_14865	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PJW08_14905	COG1388	LysM domain
PJW08_14905	COG0791	NLP P60 protein
PJW08_14910	COG0708	Exodeoxyribonuclease III
PJW08_14920	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
PJW08_14925	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
PJW08_14975	COG0513	Belongs to the DEAD box helicase family
PJW08_15010	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
PJW08_15050	COG2356	endonuclease I
PJW08_15095	COG3842	ATPase activity
PJW08_15100	COG3361	conserved protein (COG2071)
PJW08_15180	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
PJW08_15220	COG3279	Response regulator of the LytR AlgR family
PJW08_15235	COG1187	pseudouridine synthase activity
PJW08_15245	COG2153	protein acetylation
PJW08_15250	COG0698	ribose 5-phosphate isomerase