locus-tag	class	description
PG911_00010	COG1597	lipid kinase activity
PG911_00015	COG0557	exoribonuclease II activity
PG911_00025	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PG911_00030	COG0393	Putative heavy-metal-binding
PG911_00045	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
PG911_00050	COG0445	tRNA wobble uridine modification
PG911_00055	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PG911_00080	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
PG911_00080	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PG911_00095	COG0420	3'-5' exonuclease activity
PG911_00100	COG0419	ATPase involved in DNA repair
PG911_00175	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PG911_00185	COG1988	membrane-bound metal-dependent
PG911_00190	COG0697	spore germination
PG911_00210	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PG911_00210	COG0758	DNA mediated transformation
PG911_00220	COG1607	acyl-coa hydrolase
PG911_00250	COG0628	permease
PG911_00270	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PG911_00275	COG4172	Belongs to the ABC transporter superfamily
PG911_00295	COG4733	cellulase activity
PG911_00295	COG5297	Belongs to the glycosyl hydrolase family 6
PG911_00315	COG0488	(ABC) transporter
PG911_00345	COG0745	RESPONSE REGULATOR receiver
PG911_00350	COG5002	protein histidine kinase activity
PG911_00365	COG0793	Belongs to the peptidase S41A family
PG911_00370	COG0594	ribonuclease P activity
PG911_00420	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PG911_00435	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
PG911_00445	COG0720	synthase
PG911_00450	COG0193	aminoacyl-tRNA hydrolase activity
PG911_00455	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
PG911_00460	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PG911_00470	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
PG911_00480	COG1505	serine-type exopeptidase activity
PG911_00530	COG2274	protein secretion by the type I secretion system
PG911_00535	COG2274	protein secretion by the type I secretion system
PG911_00620	COG0746	molybdenum cofactor guanylyltransferase activity
PG911_00625	COG0746	molybdenum cofactor guanylyltransferase activity
PG911_00625	COG0315	cyclic pyranopterin monophosphate synthase activity
PG911_00630	COG0303	'Molybdopterin
PG911_00635	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
PG911_00645	COG0322	excinuclease ABC activity
PG911_00650	COG1752	Esterase of the alpha-beta hydrolase superfamily
PG911_00660	COG1530	ribonuclease E activity
PG911_00665	COG0776	regulation of translation
PG911_00685	COG1629	transport
PG911_00690	COG1194	a g-specific adenine glycosylase
PG911_00695	COG0629	single-stranded DNA binding
PG911_00725	COG0697	spore germination
PG911_00730	COG0612	Peptidase, M16
PG911_00735	COG0612	Peptidase, M16
PG911_00740	COG0261	This protein binds to 23S rRNA in the presence of protein L20
PG911_00745	COG0211	Belongs to the bacterial ribosomal protein bL27 family
PG911_00750	COG3279	Response regulator of the LytR AlgR family
PG911_00755	COG2972	Histidine kinase
PG911_00755	COG0745	RESPONSE REGULATOR receiver
PG911_00760	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PG911_00770	COG0826	peptidase U32
PG911_00780	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PG911_00785	COG1418	mRNA catabolic process
PG911_00790	COG1024	Enoyl-CoA hydratase
PG911_00800	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PG911_00820	COG1114	Component of the transport system for branched-chain amino acids
PG911_00825	COG2267	carboxylic ester hydrolase activity
PG911_00830	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PG911_00845	COG0220	tRNA (guanine-N7-)-methyltransferase activity
PG911_00855	COG0489	protein tyrosine kinase activity
PG911_00865	COG0492	ferredoxin-NADP+ reductase activity
PG911_00875	COG0633	Ferredoxin
PG911_00880	COG2116	formate transmembrane transporter activity
PG911_00885	COG0716	FMN binding
PG911_00905	COG4206	TonB-dependent receptor
PG911_00905	COG1629	transport
PG911_00920	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
PG911_00925	COG3185	4-Hydroxyphenylpyruvate dioxygenase
PG911_00930	COG3483	tryptophan 2,3-dioxygenase activity
PG911_00945	COG0166	Belongs to the GPI family
PG911_00950	COG4771	TonB-dependent receptor
PG911_01005	COG0314	molybdopterin synthase activity
PG911_01010	COG0126	phosphoglycerate kinase activity
PG911_01020	COG0667	Aldo Keto reductase
PG911_01040	COG1272	protein, Hemolysin III
PG911_01045	COG2954	triphosphatase activity
PG911_01050	COG1381	Involved in DNA repair and RecF pathway recombination
PG911_01065	COG2814	Major facilitator Superfamily
PG911_01070	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
PG911_01090	COG0840	transmembrane signaling receptor activity
PG911_01095	COG0840	transmembrane signaling receptor activity
PG911_01105	COG0632	four-way junction helicase activity
PG911_01115	COG0509	glycine decarboxylation via glycine cleavage system
PG911_01145	COG1215	transferase activity, transferring glycosyl groups
PG911_01150	COG0463	Glycosyl transferase, family 2
PG911_01165	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
PG911_01195	COG0306	phosphate transporter
PG911_01205	COG0463	Glycosyl transferase, family 2
PG911_01210	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
PG911_01225	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PG911_01235	COG1629	transport
PG911_01270	COG0495	leucyl-tRNA aminoacylation
PG911_01295	COG1946	Acyl-CoA thioesterase
PG911_01335	COG2356	endonuclease I
PG911_01345	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
PG911_01345	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
PG911_01360	COG1970	mechanosensitive ion channel activity
PG911_01365	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PG911_01370	COG1435	thymidine kinase activity
PG911_01380	COG0438	transferase activity, transferring glycosyl groups
PG911_01385	COG0589	response to stress
PG911_01390	COG0779	Required for maturation of 30S ribosomal subunits
PG911_01395	COG0195	Participates in both transcription termination and antitermination
PG911_01400	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PG911_01415	COG4771	TonB-dependent receptor
PG911_01425	COG0803	Belongs to the bacterial solute-binding protein 9 family
PG911_01430	COG1121	(ABC) transporter
PG911_01435	COG1108	ABC-type Mn2 Zn2 transport systems permease components
PG911_01440	COG1108	ABC-type Mn2 Zn2 transport systems permease components
PG911_01470	COG0156	8-amino-7-oxononanoate synthase activity
PG911_01480	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PG911_01485	COG0355	proton-transporting ATP synthase activity, rotational mechanism
PG911_01490	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PG911_01495	COG4122	O-methyltransferase activity
PG911_01505	COG1595	DNA-templated transcription, initiation
PG911_01520	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
PG911_01525	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PG911_01550	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
PG911_01565	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
PG911_01570	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
PG911_01600	COG0508	dehydrogenase complex catalyzes the overall conversion of
PG911_01610	COG3118	belongs to the thioredoxin family
PG911_01615	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
PG911_01620	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
PG911_01670	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
PG911_01685	COG0719	Fe-S assembly protein
PG911_01690	COG0396	ATPase activity
PG911_01700	COG0719	Fe-S assembly protein
PG911_01710	COG1858	cytochrome C peroxidase
PG911_01730	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
PG911_01740	COG1652	LysM domain
PG911_01750	COG1561	YicC-like family, N-terminal region
PG911_01755	COG0194	GDP metabolic process
PG911_01760	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PG911_01790	COG4942	peptidase
PG911_01810	COG3279	Response regulator of the LytR AlgR family
PG911_01815	COG2258	MOSC domain
PG911_01820	COG0793	Belongs to the peptidase S41A family
PG911_01835	COG1522	sequence-specific DNA binding
PG911_01855	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
PG911_01875	COG2885	chlorophyll binding
PG911_01875	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
PG911_01880	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PG911_01895	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PG911_01915	COG2391	methyltransferase activity
PG911_01920	COG0220	tRNA (guanine-N7-)-methyltransferase activity
PG911_01920	COG1519	Transferase
PG911_01930	COG0439	Biotin carboxylase
PG911_01935	COG0511	ligase activity, forming carbon-carbon bonds
PG911_01940	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PG911_01945	COG0333	Belongs to the bacterial ribosomal protein bL32 family
PG911_01955	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
PG911_01995	COG0076	glutamate decarboxylase activity
PG911_02000	COG3486	L-lysine 6-monooxygenase (NADPH) activity
PG911_02040	COG1024	Enoyl-CoA hydratase
PG911_02050	COG2207	Transcriptional regulator
PG911_02050	COG1917	Cupin 2, conserved barrel domain protein
PG911_02055	COG0612	Peptidase, M16
PG911_02070	COG1629	transport
PG911_02070	COG4206	TonB-dependent receptor
PG911_02085	COG1309	transcriptional regulator
PG911_02100	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PG911_02110	COG3275	phosphorelay sensor kinase activity
PG911_02120	COG2137	regulation of response to DNA damage stimulus
PG911_02130	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
PG911_02150	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PG911_02155	COG1968	undecaprenyl-diphosphatase activity
PG911_02165	COG2177	Part of the ABC transporter FtsEX involved in
PG911_02170	COG0346	lactoylglutathione lyase activity
PG911_02195	COG4585	Histidine kinase
PG911_02205	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PG911_02210	COG4591	ABC-type transport system involved in lipoprotein release permease component
PG911_02215	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PG911_02220	COG0481	GTPase activity
PG911_02235	COG0252	asparaginase activity
PG911_02240	COG0811	peptide transport
PG911_02250	COG0848	biopolymer transport protein
PG911_02270	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
PG911_02275	COG0017	Asparaginyl-tRNA synthetase
PG911_02285	COG0233	cytoplasmic translational termination
PG911_02290	COG0528	UMP kinase activity
PG911_02295	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PG911_02300	COG0052	Belongs to the universal ribosomal protein uS2 family
PG911_02305	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
PG911_02310	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PG911_02320	COG1477	protein flavinylation
PG911_02345	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PG911_02350	COG0501	Belongs to the peptidase M48B family
PG911_02355	COG3186	Phenylalanine-4-hydroxylase
PG911_02370	COG0789	Transcriptional regulator
PG911_02400	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
PG911_02410	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
PG911_02420	COG0702	epimerase
PG911_02440	COG0386	Belongs to the glutathione peroxidase family
PG911_02450	COG0415	Belongs to the DNA photolyase family
PG911_02465	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PG911_02490	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
PG911_02515	COG0745	RESPONSE REGULATOR receiver
PG911_02515	COG2972	Histidine kinase
PG911_02520	COG3279	Response regulator of the LytR AlgR family
PG911_02565	COG2068	MobA-Related Protein
PG911_02570	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
PG911_02575	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
PG911_02590	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PG911_02610	COG1160	GTP binding
PG911_02620	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PG911_02675	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PG911_02685	COG5002	protein histidine kinase activity
PG911_02690	COG0745	RESPONSE REGULATOR receiver
PG911_02695	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
PG911_02735	COG0668	transmembrane transport
PG911_02745	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
PG911_02750	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PG911_02810	COG0339	signal peptide processing
PG911_02815	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PG911_02825	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PG911_02835	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
PG911_02850	COG4191	Histidine kinase
PG911_02875	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
PG911_02880	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
PG911_02920	COG0784	Response regulator, receiver
PG911_02920	COG2198	Histidine kinase
PG911_02920	COG5002	protein histidine kinase activity
PG911_02950	COG1012	belongs to the aldehyde dehydrogenase family
PG911_02955	COG0564	pseudouridine synthase activity
PG911_02960	COG0218	Necessary for normal cell division and for the maintenance of normal septation
PG911_02965	COG2267	carboxylic ester hydrolase activity
PG911_02970	COG2001	Belongs to the MraZ family
PG911_02975	COG0275	rRNA processing
PG911_02985	COG0768	penicillin binding
PG911_02990	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PG911_03000	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PG911_03005	COG0772	Belongs to the SEDS family
PG911_03010	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PG911_03015	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
PG911_03030	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PG911_03035	COG1610	YqeY-like protein
PG911_03055	COG3228	Belongs to the MtfA family
PG911_03075	COG0517	IMP dehydrogenase activity
PG911_03080	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
PG911_03085	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PG911_03090	COG1595	DNA-templated transcription, initiation
PG911_03095	COG1595	DNA-templated transcription, initiation
PG911_03115	COG2226	methyltransferase
PG911_03120	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
PG911_03135	COG0442	prolyl-tRNA aminoacylation
PG911_03150	COG0268	Binds directly to 16S ribosomal RNA
PG911_03155	COG0772	Belongs to the SEDS family
PG911_03160	COG0768	penicillin binding
PG911_03175	COG1077	Cell shape determining protein MreB Mrl
PG911_03180	COG0138	bifunctional purine biosynthesis protein purh
PG911_03210	COG1187	pseudouridine synthase activity
PG911_03240	COG1629	transport
PG911_03265	COG2081	HI0933 family
PG911_03280	COG1506	peptidase
PG911_03280	COG0823	Involved in the tonB-independent uptake of proteins
PG911_03295	COG4232	protein-disulfide reductase activity
PG911_03300	COG0658	competence protein
PG911_03300	COG2333	competence protein COMEC
PG911_03315	COG1960	acyl-CoA dehydrogenase activity
PG911_03320	COG0183	Belongs to the thiolase family
PG911_03325	COG1024	Enoyl-CoA hydratase
PG911_03325	COG1250	3-hydroxyacyl-CoA dehydrogenase
PG911_03335	COG4152	abc transporter atp-binding protein
PG911_03340	COG1668	transmembrane transport
PG911_03345	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
PG911_03345	COG3264	Mechanosensitive ion channel
PG911_03360	COG0450	alkyl hydroperoxide reductase
PG911_03375	COG0159	tryptophan synthase activity
PG911_03380	COG0133	tryptophan synthase activity
PG911_03385	COG0135	phosphoribosylanthranilate isomerase activity
PG911_03390	COG0134	indole-3-glycerol-phosphate synthase activity
PG911_03395	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PG911_03400	COG0512	Glutamine amidotransferase of anthranilate synthase
PG911_03400	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PG911_03405	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PG911_03410	COG0367	asparagine synthase
PG911_03415	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
PG911_03425	COG0187	DNA topoisomerase II activity
PG911_03440	COG0039	L-malate dehydrogenase activity
PG911_03445	COG2884	Cell division ATP-binding protein ftsE
PG911_03465	COG1115	amino acid carrier protein
PG911_03480	COG1574	metal-dependent hydrolase with the TIM-barrel fold
PG911_03495	COG1595	DNA-templated transcription, initiation
PG911_03520	COG2249	NAD(P)H dehydrogenase (quinone) activity
PG911_03565	COG4946	Tricorn protease homolog
PG911_03565	COG0793	Belongs to the peptidase S41A family
PG911_03570	COG0514	ATP-dependent DNA helicase (RecQ)
PG911_03620	COG1090	epimerase
PG911_03665	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
PG911_03665	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
PG911_03665	COG1703	isobutyryl-CoA mutase activity
PG911_03680	COG0583	DNA-binding transcription factor activity
PG911_03685	COG2986	histidine ammonia-lyase
PG911_03690	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
PG911_03705	COG1131	(ABC) transporter
PG911_03730	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
PG911_03735	COG3279	Response regulator of the LytR AlgR family
PG911_03740	COG1629	transport
PG911_03750	COG0284	orotidine-5'-phosphate decarboxylase activity
PG911_03755	COG0601	transmembrane transport
PG911_03765	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
PG911_03775	COG0149	triose-phosphate isomerase activity
PG911_03780	COG2264	protein methyltransferase activity
PG911_03785	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
PG911_03805	COG2885	chlorophyll binding
PG911_03805	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
PG911_03825	COG3781	membrane
PG911_03855	COG0174	glutamine synthetase
PG911_03870	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
PG911_03880	COG0534	Mate efflux family protein
PG911_03895	COG1131	(ABC) transporter
PG911_03905	COG4771	TonB-dependent receptor
PG911_03920	COG0666	response to abiotic stimulus
PG911_03925	COG1959	2 iron, 2 sulfur cluster binding
PG911_03935	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
PG911_04010	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
PG911_04025	COG1129	ABC transporter
PG911_04035	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PG911_04200	COG3530	Putative quorum-sensing-regulated virulence factor
PG911_04220	COG4452	Inner membrane protein CreD
PG911_04240	COG4251	negative regulation of phosphorylation
PG911_04260	COG2877	3-deoxy-8-phosphooctulonate synthase activity
PG911_04270	COG1404	Belongs to the peptidase S8 family
PG911_04310	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
PG911_04345	COG0569	domain protein
PG911_04350	COG2003	Belongs to the UPF0758 family
PG911_04360	COG0546	phosphoglycolate phosphatase activity
PG911_04380	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
PG911_04390	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PG911_04400	COG1629	transport
PG911_04410	COG4206	TonB-dependent receptor
PG911_04410	COG1629	transport
PG911_04415	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PG911_04420	COG0049	tRNA binding
PG911_04425	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PG911_04430	COG0051	transcription antitermination factor activity, RNA binding
PG911_04435	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PG911_04440	COG0088	Forms part of the polypeptide exit tunnel
PG911_04445	COG0089	rRNA binding
PG911_04450	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PG911_04455	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PG911_04460	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PG911_04465	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PG911_04470	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PG911_04475	COG0255	Belongs to the universal ribosomal protein uL29 family
PG911_04480	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PG911_04485	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PG911_04490	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PG911_04495	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PG911_04500	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PG911_04505	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PG911_04510	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PG911_04515	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PG911_04520	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PG911_04525	COG1841	ribosomal large subunit assembly
PG911_04530	COG0200	Binds to the 23S rRNA
PG911_04540	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PG911_04545	COG0257	Belongs to the bacterial ribosomal protein bL36 family
PG911_04550	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PG911_04555	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PG911_04560	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PG911_04565	COG0202	RNA polymerase activity
PG911_04570	COG0203	ribosomal protein L17
PG911_04575	COG0505	Belongs to the CarA family
PG911_04580	COG0148	phosphopyruvate hydratase activity
PG911_04590	COG0010	Belongs to the arginase family
PG911_04600	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
PG911_04615	COG0352	thiamine-phosphate diphosphorylase activity
PG911_04620	COG2022	thiamine diphosphate biosynthetic process
PG911_04625	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
PG911_04655	COG0300	oxidoreductase activity
PG911_04660	COG2072	flavoprotein involved in K transport
PG911_04680	COG0277	FAD linked oxidase domain protein
PG911_04680	COG0247	lactate metabolic process
PG911_04690	COG5383	Protein conserved in bacteria
PG911_04710	COG3119	arylsulfatase activity
PG911_04715	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PG911_04735	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PG911_04755	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PG911_04760	COG1663	tetraacyldisaccharide 4'-kinase activity
PG911_04785	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
PG911_04805	COG0254	rRNA binding
PG911_04810	COG0069	glutamate synthase activity
PG911_04815	COG2813	Specifically methylates the guanine in position
PG911_04825	COG0076	glutamate decarboxylase activity
PG911_04835	COG0300	oxidoreductase activity
PG911_04840	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PG911_04850	COG2996	Protein conserved in bacteria
PG911_04875	COG1058	Belongs to the CinA family
PG911_04875	COG1546	Belongs to the CinA family
PG911_04880	COG0227	Belongs to the bacterial ribosomal protein bL28 family
PG911_04885	COG0267	Belongs to the bacterial ribosomal protein bL33 family
PG911_04895	COG0552	protein localization to endoplasmic reticulum
PG911_04950	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PG911_04955	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PG911_05015	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PG911_05085	COG0045	succinate-CoA ligase (ADP-forming) activity
PG911_05100	COG0384	phenazine biosynthesis protein PhzF
PG911_05105	COG0556	nucleotide-excision repair
PG911_05145	COG0237	dephospho-CoA kinase activity
PG911_05155	COG1862	Preprotein translocase
PG911_05165	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PG911_05175	COG1132	(ABC) transporter
PG911_05185	COG1169	isochorismate synthase
PG911_05220	COG0009	L-threonylcarbamoyladenylate synthase
PG911_05275	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
PG911_05285	COG0347	Belongs to the P(II) protein family
PG911_05290	COG0004	ammonium transporteR
PG911_05345	COG3547	Transposase (IS116 IS110 IS902 family)
PG911_05375	COG0488	(ABC) transporter
PG911_05385	COG0653	protein targeting
PG911_05430	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PG911_05440	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
PG911_05450	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PG911_05465	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
PG911_05500	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
PG911_05595	COG0745	RESPONSE REGULATOR receiver
PG911_05600	COG3852	Histidine kinase
PG911_05615	COG1595	DNA-templated transcription, initiation
PG911_05620	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PG911_05625	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
PG911_05645	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
PG911_05660	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
PG911_05665	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
PG911_05680	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
PG911_05695	COG0326	Molecular chaperone. Has ATPase activity
PG911_05705	COG0673	inositol 2-dehydrogenase activity
PG911_05710	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PG911_05730	COG1234	tRNA 3'-trailer cleavage
PG911_05745	COG0540	Belongs to the ATCase OTCase family
PG911_05750	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PG911_05755	COG0659	secondary active sulfate transmembrane transporter activity
PG911_05765	COG0783	Belongs to the Dps family
PG911_05775	COG1858	cytochrome C peroxidase
PG911_05780	COG1253	flavin adenine dinucleotide binding
PG911_05785	COG0644	oxidoreductase
PG911_05805	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
PG911_05825	COG4585	Histidine kinase
PG911_05835	COG1132	(ABC) transporter
PG911_05865	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
PG911_05905	COG0384	phenazine biosynthesis protein PhzF
PG911_05910	COG1595	DNA-templated transcription, initiation
PG911_06030	COG1702	phosphate starvation-inducible protein PhoH
PG911_06035	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
PG911_06045	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
PG911_06065	COG0156	8-amino-7-oxononanoate synthase activity
PG911_06140	COG4771	TonB-dependent receptor
PG911_06145	COG0702	epimerase
PG911_06155	COG3537	Alpha-1,2-mannosidase
PG911_06175	COG0460	homoserine dehydrogenase
PG911_06175	COG0527	aspartate kinase activity
PG911_06185	COG1959	2 iron, 2 sulfur cluster binding
PG911_06195	COG0175	sulfate reduction
PG911_06200	COG0175	sulfate reduction
PG911_06210	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
PG911_06215	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
PG911_06225	COG1648	precorrin-2 dehydrogenase activity
PG911_06225	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
PG911_06230	COG0492	ferredoxin-NADP+ reductase activity
PG911_06235	COG0633	Ferredoxin
PG911_06240	COG1045	serine acetyltransferase
PG911_06250	COG0646	methionine synthase
PG911_06250	COG1410	methionine synthase
PG911_06265	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
PG911_06275	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PG911_06280	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PG911_06285	COG0066	3-isopropylmalate dehydratase activity
PG911_06295	COG0067	glutamate synthase
PG911_06295	COG0069	glutamate synthase activity
PG911_06295	COG0070	glutamate synthase
PG911_06320	COG2249	NAD(P)H dehydrogenase (quinone) activity
PG911_06370	COG0590	tRNA wobble adenosine to inosine editing
PG911_06380	COG0644	oxidoreductase
PG911_06545	COG0706	membrane insertase activity
PG911_06550	COG0504	CTP synthase activity
PG911_06555	COG0230	Belongs to the bacterial ribosomal protein bL34 family
PG911_06560	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
PG911_06630	COG1607	acyl-coa hydrolase
PG911_06655	COG1595	DNA-templated transcription, initiation
PG911_06665	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PG911_06670	COG1181	Belongs to the D-alanine--D-alanine ligase family
PG911_06680	COG0564	pseudouridine synthase activity
PG911_06685	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
PG911_06720	COG1187	pseudouridine synthase activity
PG911_06725	COG0343	queuine tRNA-ribosyltransferase activity
PG911_06740	COG0825	malonyl-CoA metabolic process
PG911_06750	COG0602	queuosine metabolic process
PG911_06755	COG0433	COG0433 Predicted ATPase
PG911_06795	COG0116	Belongs to the methyltransferase superfamily
PG911_06820	COG1250	3-hydroxyacyl-CoA dehydrogenase
PG911_06825	COG0673	inositol 2-dehydrogenase activity
PG911_06830	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
PG911_06845	COG0813	purine-nucleoside phosphorylase activity
PG911_06875	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PG911_06890	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
PG911_06895	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
PG911_06895	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PG911_06945	COG0456	acetyltransferase
PG911_07025	COG0714	Associated with various cellular activities
PG911_07050	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PG911_07120	COG4585	Histidine kinase
PG911_07140	COG3422	double-strand break repair
PG911_07145	COG2314	TM2 domain
PG911_07200	COG1794	racemase activity, acting on amino acids and derivatives
PG911_07205	COG0668	transmembrane transport
PG911_07215	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
PG911_07220	COG1522	sequence-specific DNA binding
PG911_07225	COG1028	Short-chain dehydrogenase reductase Sdr
PG911_07265	COG3541	Predicted nucleotidyltransferase
PG911_07295	COG1215	transferase activity, transferring glycosyl groups
PG911_07305	COG1690	Belongs to the RtcB family
PG911_07310	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PG911_07335	COG1881	PFAM PEBP family protein
PG911_07405	COG2096	Adenosyltransferase
PG911_07410	COG1797	cobyrinic acid a,c-diamide synthase activity
PG911_07445	COG0778	Nitroreductase
PG911_07500	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
PG911_07510	COG1492	cobalamin metabolic process
PG911_07515	COG1943	Transposase
PG911_07525	COG1401	restriction endodeoxyribonuclease activity
PG911_07525	COG1401	restriction endodeoxyribonuclease activity
PG911_07545	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
PG911_07630	COG3263	regulation of cellular component size
PG911_07645	COG0659	secondary active sulfate transmembrane transporter activity
PG911_07710	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PG911_07720	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PG911_07765	COG2373	Large extracellular alpha-helical protein
PG911_07795	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PG911_07885	COG1881	PFAM PEBP family protein
PG911_07900	COG1073	alpha beta
PG911_07980	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
PG911_07985	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
PG911_07990	COG2087	Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate
PG911_08010	COG3011	Protein conserved in bacteria
PG911_08015	COG1136	(ABC) transporter
PG911_08020	COG1136	(ABC) transporter
PG911_08020	COG0577	efflux transmembrane transporter activity
PG911_08025	COG1136	(ABC) transporter
PG911_08025	COG0577	efflux transmembrane transporter activity
PG911_08045	COG0404	The glycine cleavage system catalyzes the degradation of glycine
PG911_08050	COG0006	proline dipeptidase activity
PG911_08055	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
PG911_08075	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PG911_08080	COG1228	amidohydrolase
PG911_08120	COG3279	Response regulator of the LytR AlgR family
PG911_08155	COG0463	Glycosyl transferase, family 2
PG911_08220	COG1363	Peptidase, m42
PG911_08240	COG2356	endonuclease I
PG911_08250	COG0167	dihydroorotate dehydrogenase activity
PG911_08260	COG0513	Belongs to the DEAD box helicase family
PG911_08280	COG4953	penicillin-binding protein 1C
PG911_08310	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PG911_08325	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PG911_08355	COG2346	COG2346, Truncated hemoglobins
PG911_08365	COG1607	acyl-coa hydrolase
PG911_08370	COG3279	Response regulator of the LytR AlgR family
PG911_08430	COG0488	(ABC) transporter
PG911_08480	COG3340	Belongs to the peptidase S51 family
PG911_08510	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PG911_08515	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PG911_08545	COG2270	Major facilitator Superfamily
PG911_08560	COG1022	Amp-dependent synthetase and ligase
PG911_08565	COG1022	Amp-dependent synthetase and ligase
PG911_08585	COG1215	transferase activity, transferring glycosyl groups
PG911_08935	COG0326	Molecular chaperone. Has ATPase activity
PG911_08955	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PG911_08965	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
PG911_08970	COG0545	Peptidyl-prolyl cis-trans isomerase
PG911_08980	COG3958	Transketolase
PG911_08985	COG0424	maF-like protein
PG911_08995	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
PG911_09000	COG3047	cAMP biosynthetic process
PG911_09015	COG0542	response to heat
PG911_09035	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PG911_09045	COG1322	Protein conserved in bacteria
PG911_09070	COG1278	Cold shock
PG911_09075	COG1278	Cold shock
PG911_09090	COG1979	alcohol dehydrogenase
PG911_09100	COG1309	transcriptional regulator
PG911_09120	COG4585	Histidine kinase
PG911_09150	COG4682	membrane
PG911_09160	COG1522	sequence-specific DNA binding
PG911_09170	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PG911_09230	COG3279	Response regulator of the LytR AlgR family
PG911_09235	COG3275	phosphorelay sensor kinase activity
PG911_09240	COG1131	(ABC) transporter
PG911_09250	COG3279	Response regulator of the LytR AlgR family
PG911_09255	COG3275	phosphorelay sensor kinase activity
PG911_09260	COG1131	(ABC) transporter
PG911_09270	COG0436	Aminotransferase
PG911_09285	COG0302	gtp cyclohydrolase
PG911_09300	COG0523	cobalamin synthesis protein
PG911_09405	COG2814	Major facilitator Superfamily
PG911_09410	COG0564	pseudouridine synthase activity
PG911_09415	COG1522	sequence-specific DNA binding
PG911_09440	COG0539	negative regulation of cytoplasmic translation
PG911_09445	COG1902	pentaerythritol trinitrate reductase activity
PG911_09465	COG1739	Uncharacterized protein family UPF0029
PG911_09470	COG0697	spore germination
PG911_09475	COG1011	Hydrolase
PG911_09480	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PG911_09480	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PG911_09495	COG2890	protein-(glutamine-N5) methyltransferase activity
PG911_09500	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
PG911_09570	COG3813	Protein conserved in bacteria
PG911_09585	COG2340	Cysteine-rich secretory protein family
PG911_09625	COG0564	pseudouridine synthase activity
PG911_09630	COG2207	Transcriptional regulator
PG911_09645	COG0641	radical SAM
PG911_09655	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
PG911_09665	COG2318	DinB family
PG911_09675	COG0047	phosphoribosylformylglycinamidine synthase activity
PG911_09675	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PG911_09685	COG1846	Transcriptional regulator
PG911_09690	COG0697	spore germination
PG911_09700	COG0443	Heat shock 70 kDa protein
PG911_09720	COG1136	(ABC) transporter
PG911_09730	COG2204	response regulator
PG911_09735	COG2205	protein histidine kinase activity
PG911_09745	COG1028	Short-chain dehydrogenase reductase Sdr
PG911_09750	COG0612	Peptidase, M16
PG911_09755	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
PG911_09765	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PG911_09770	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PG911_09775	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
PG911_09775	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
PG911_09780	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PG911_09785	COG1078	dGTPase activity
PG911_09790	COG2204	response regulator
PG911_09795	COG3738	Protein conserved in bacteria
PG911_09800	COG0802	atpase or kinase
PG911_09805	COG0686	Belongs to the AlaDH PNT family
PG911_09810	COG5002	protein histidine kinase activity
PG911_09810	COG3850	Histidine kinase
PG911_09815	COG0745	RESPONSE REGULATOR receiver
PG911_09830	COG1024	Enoyl-CoA hydratase
PG911_09850	COG0514	ATP-dependent DNA helicase (RecQ)
PG911_09855	COG0517	IMP dehydrogenase activity
PG911_09855	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
PG911_09870	COG1137	ATPase activity
PG911_09875	COG1183	phosphatidylcholine synthase activity
PG911_09890	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
PG911_09915	COG4974	Belongs to the 'phage' integrase family
PG911_09930	COG0463	Glycosyl transferase, family 2
PG911_09935	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PG911_09940	COG1132	(ABC) transporter
PG911_09945	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
PG911_09945	COG0617	tRNA 3'-terminal CCA addition
PG911_09945	COG0517	IMP dehydrogenase activity
PG911_09950	COG0009	L-threonylcarbamoyladenylate synthase
PG911_09955	COG1368	sulfuric ester hydrolase activity
PG911_09970	COG0463	Glycosyl transferase, family 2
PG911_09980	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PG911_09985	COG0242	peptide deformylase activity
PG911_09995	COG3956	TIGRFAM MazG family protein
PG911_10005	COG4166	transmembrane transport
PG911_10020	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PG911_10045	COG4895	conserved protein (DUF2196)
PG911_10050	COG1278	Cold shock
PG911_10055	COG1278	Cold shock
PG911_10060	COG1278	Cold shock
PG911_10085	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
PG911_10090	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
PG911_10110	COG4771	TonB-dependent receptor
PG911_10115	COG0302	gtp cyclohydrolase
PG911_10120	COG0124	histidyl-tRNA synthetase
PG911_10125	COG1295	ribonuclease BN
PG911_10145	COG0339	signal peptide processing
PG911_10160	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PG911_10175	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PG911_10180	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PG911_10185	COG1120	ATPase activity
PG911_10190	COG2234	aminopeptidase activity
PG911_10240	COG3209	COG3209 Rhs family protein
PG911_10250	COG4104	PAAR repeat-containing protein
PG911_10250	COG4104	PAAR repeat-containing protein
PG911_10250	COG3209	COG3209 Rhs family protein
PG911_10250	COG3209	COG3209 Rhs family protein
PG911_10275	COG0583	DNA-binding transcription factor activity
PG911_10285	COG4221	oxidoreductase activity
PG911_10320	COG1959	2 iron, 2 sulfur cluster binding
PG911_10330	COG1845	cytochrome c oxidase, subunit III
PG911_10345	COG0714	Associated with various cellular activities
PG911_10365	COG3256	nitric oxide reductase
PG911_10375	COG2010	Cytochrome c
PG911_10405	COG4263	nitrous-oxide reductase activity
PG911_10415	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
PG911_10485	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
PG911_10495	COG4968	Prepilin-type N-terminal cleavage methylation domain
PG911_10500	COG1459	type II secretion system
PG911_10530	COG0243	molybdopterin cofactor binding
PG911_10545	COG0437	4 iron, 4 sulfur cluster binding
PG911_10560	COG0745	RESPONSE REGULATOR receiver
PG911_10610	COG3279	Response regulator of the LytR AlgR family
PG911_10620	COG4251	negative regulation of phosphorylation
PG911_10630	COG4251	negative regulation of phosphorylation
PG911_10640	COG0784	Response regulator, receiver
PG911_10665	COG0083	homoserine kinase activity
PG911_10670	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
PG911_10700	COG0010	Belongs to the arginase family
PG911_10735	COG3275	phosphorelay sensor kinase activity
PG911_10760	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
PG911_10770	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PG911_10775	COG1393	Belongs to the ArsC family
PG911_10790	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
PG911_10795	COG0497	DNA recombination
PG911_10820	COG1528	Iron-storage protein
PG911_10825	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PG911_10855	COG2378	regulation of single-species biofilm formation
PG911_10870	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PG911_10895	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PG911_10900	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PG911_10910	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PG911_10920	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PG911_10925	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PG911_10930	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PG911_10945	COG0653	protein targeting
PG911_10960	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PG911_10995	COG2972	Histidine kinase
PG911_10995	COG0745	RESPONSE REGULATOR receiver
PG911_11000	COG3279	Response regulator of the LytR AlgR family
PG911_11015	COG0052	Belongs to the universal ribosomal protein uS2 family
PG911_11060	COG1090	epimerase
PG911_11070	COG0508	dehydrogenase complex catalyzes the overall conversion of
PG911_11090	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
PG911_11100	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
PG911_11105	COG0346	lactoylglutathione lyase activity
PG911_11110	COG0113	porphobilinogen synthase activity
PG911_11120	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
PG911_11140	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
PG911_11145	COG1981	membrane
PG911_11155	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PG911_11160	COG2195	Cleaves the N-terminal amino acid of tripeptides
PG911_11165	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
PG911_11170	COG0405	Gamma-glutamyltransferase
PG911_11190	COG1231	oxidoreductase activity
PG911_11195	COG0564	pseudouridine synthase activity
PG911_11200	COG0336	Belongs to the RNA methyltransferase TrmD family
PG911_11205	COG0335	large ribosomal subunit rRNA binding
PG911_11215	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PG911_11270	COG1629	transport
PG911_11310	COG1266	CAAX protease self-immunity
PG911_11315	COG4948	Mandelate Racemase Muconate Lactonizing
PG911_11330	COG1575	Belongs to the MenA family. Type 1 subfamily
PG911_11340	COG2181	nitrate reductase activity
PG911_11340	COG0247	lactate metabolic process
PG911_11345	COG2181	nitrate reductase activity
PG911_11345	COG0247	lactate metabolic process
PG911_11355	COG0860	N-Acetylmuramoyl-L-alanine amidase
PG911_11360	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
PG911_11365	COG0251	oxidation-reduction process
PG911_11390	COG1803	Methylglyoxal synthase
PG911_11405	COG0205	6-phosphofructokinase activity
PG911_11425	COG3525	Glycosyl hydrolase, family 20, catalytic domain
PG911_11435	COG0363	glucosamine-6-phosphate deaminase activity
PG911_11445	COG4771	TonB-dependent receptor
PG911_11460	COG3279	Response regulator of the LytR AlgR family
PG911_11465	COG0738	Major facilitator superfamily
PG911_11485	COG1760	l-serine dehydratase
PG911_11495	COG3022	response to hydroperoxide
PG911_11500	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
PG911_11500	COG0321	lipoyl(octanoyl) transferase activity
PG911_11540	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
PG911_11550	COG1482	cell wall glycoprotein biosynthetic process
PG911_11560	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
PG911_11580	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PG911_11605	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PG911_11630	COG1418	mRNA catabolic process
PG911_11775	COG3609	addiction module antidote protein, CC2985 family
PG911_11790	COG2949	membrane
PG911_11795	COG2003	Belongs to the UPF0758 family
PG911_11805	COG0534	Mate efflux family protein
PG911_11810	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PG911_11820	COG1674	ftsk spoiiie
PG911_11835	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
PG911_11835	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
PG911_11845	COG0482	sulfurtransferase activity
PG911_11885	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PG911_11905	COG3275	phosphorelay sensor kinase activity
PG911_11910	COG3279	Response regulator of the LytR AlgR family
PG911_11920	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PG911_11950	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PG911_11980	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PG911_11990	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PG911_12000	COG0210	DNA helicase
PG911_12010	COG2897	thiosulfate sulfurtransferase activity
PG911_12015	COG1301	dicarboxylic acid transport
PG911_12040	COG2720	vancomycin resistance protein
PG911_12070	COG0488	(ABC) transporter
PG911_12080	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PG911_12085	COG0446	pyridine nucleotide-disulphide oxidoreductase
PG911_12085	COG1902	pentaerythritol trinitrate reductase activity
PG911_12090	COG0076	glutamate decarboxylase activity
PG911_12095	COG1522	sequence-specific DNA binding
PG911_12105	COG1846	Transcriptional regulator
PG911_12150	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
PG911_12180	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
PG911_12200	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
PG911_12235	COG0217	transcriptional regulatory protein
PG911_12250	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
PG911_12255	COG0516	GMP reductase activity
PG911_12255	COG0517	IMP dehydrogenase activity
PG911_12340	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
PG911_12355	COG1840	ABC-type Fe3 transport system, periplasmic component
PG911_12395	COG1595	DNA-templated transcription, initiation
PG911_12415	COG0525	valine-tRNA ligase activity
PG911_12430	COG0436	Aminotransferase
PG911_12435	COG0812	UDP-N-acetylmuramate dehydrogenase activity
PG911_12460	COG1181	Belongs to the D-alanine--D-alanine ligase family
PG911_12480	COG2205	protein histidine kinase activity
PG911_12515	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
PG911_12530	COG0583	DNA-binding transcription factor activity
PG911_12540	COG3876	Protein conserved in bacteria
PG911_12545	COG0714	Associated with various cellular activities
PG911_12550	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
PG911_12560	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
PG911_12575	COG0514	ATP-dependent DNA helicase (RecQ)
PG911_12580	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PG911_12585	COG0776	regulation of translation
PG911_12595	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
PG911_12625	COG0259	pyridoxamine-phosphate oxidase activity
PG911_12700	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
PG911_12720	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PG911_12725	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
PG911_12735	COG0215	cysteine-tRNA ligase activity
PG911_12750	COG1595	DNA-templated transcription, initiation
PG911_12760	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PG911_12760	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PG911_12785	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PG911_12790	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PG911_12790	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PG911_12805	COG2860	membrane
PG911_12825	COG1309	transcriptional regulator
PG911_12845	COG0012	GTP binding
PG911_12865	COG4771	TonB-dependent receptor
PG911_12870	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
PG911_12880	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PG911_12900	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PG911_12910	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
PG911_12915	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PG911_12930	COG0697	spore germination
PG911_12995	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
PG911_12995	COG0140	phosphoribosyl-ATP diphosphatase activity
PG911_13000	COG0107	imidazoleglycerol-phosphate synthase activity
PG911_13005	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PG911_13015	COG0131	Imidazoleglycerol-phosphate dehydratase
PG911_13020	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PG911_13025	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PG911_13030	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
PG911_13055	COG1217	gtp-binding protein TYPA
PG911_13070	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PG911_13075	COG0438	transferase activity, transferring glycosyl groups
PG911_13080	COG3959	Transketolase, thiamine diphosphate binding domain
PG911_13110	COG2195	Cleaves the N-terminal amino acid of tripeptides
PG911_13120	COG0359	binds to the 23S rRNA
PG911_13125	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PG911_13130	COG0360	Binds together with S18 to 16S ribosomal RNA
PG911_13150	COG1595	DNA-templated transcription, initiation
PG911_13155	COG0579	oxidoreductase
PG911_13170	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PG911_13180	COG0076	glutamate decarboxylase activity
PG911_13190	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
PG911_13195	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
PG911_13200	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PG911_13205	COG0440	acetolactate synthase activity
PG911_13210	COG0028	Belongs to the TPP enzyme family
PG911_13215	COG0129	dihydroxy-acid dehydratase activity
PG911_13230	COG0137	argininosuccinate synthase activity
PG911_13235	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PG911_13245	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
PG911_13255	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
PG911_13265	COG0165	Argininosuccinate lyase
PG911_13270	COG2885	chlorophyll binding
PG911_13280	COG5183	chlorophyll binding
PG911_13280	COG2133	pyrroloquinoline quinone binding
PG911_13315	COG0592	DNA-directed DNA polymerase activity
PG911_13325	COG1192	Involved in chromosome partitioning
PG911_13330	COG1475	DNA binding
PG911_13340	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
PG911_13345	COG0681	Belongs to the peptidase S26 family
PG911_13380	COG0438	transferase activity, transferring glycosyl groups
PG911_13420	COG1385	rRNA (uridine-N3-)-methyltransferase activity
PG911_13460	COG2326	polyphosphate kinase activity
PG911_13465	COG0655	NAD(P)H dehydrogenase (quinone) activity
PG911_13470	COG2207	Transcriptional regulator
PG911_13470	COG4753	response regulator
PG911_13475	COG0604	alcohol dehydrogenase
PG911_13475	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
PG911_13475	COG3321	synthase
PG911_13475	COG4221	oxidoreductase activity
PG911_13495	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
PG911_13500	COG0583	DNA-binding transcription factor activity
PG911_13505	COG1280	lysine exporter protein (LysE YggA)
PG911_13570	COG1252	NADH dehydrogenase
PG911_13595	COG1842	Phage shock protein A
PG911_13610	COG2255	four-way junction helicase activity
PG911_13620	COG3279	Response regulator of the LytR AlgR family
PG911_13625	COG3275	phosphorelay sensor kinase activity
PG911_13630	COG3275	phosphorelay sensor kinase activity
PG911_13635	COG0443	Heat shock 70 kDa protein
PG911_13640	COG0494	nUDIX hydrolase
PG911_13645	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PG911_13660	COG0799	negative regulation of ribosome biogenesis
PG911_13665	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PG911_13675	COG4589	Belongs to the CDS family
PG911_13695	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
PG911_13700	COG3104	oligopeptide transport
PG911_13715	COG1132	(ABC) transporter
PG911_13770	COG0662	Cupin 2, conserved barrel domain protein
PG911_13780	COG1028	Short-chain dehydrogenase reductase Sdr
PG911_13785	COG1335	isochorismatase
PG911_13820	COG2827	Endonuclease containing a URI domain
PG911_13825	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
PG911_13835	COG3844	kynureninase activity
PG911_13840	COG1414	Transcriptional regulator
PG911_13845	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
PG911_13855	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
PG911_13855	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
PG911_13890	COG2207	Transcriptional regulator
PG911_13895	COG2207	Transcriptional regulator
PG911_13900	COG2207	Transcriptional regulator
PG911_13900	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
PG911_13905	COG0778	Nitroreductase
PG911_13930	COG1902	pentaerythritol trinitrate reductase activity
PG911_14015	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
PG911_14045	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
PG911_14060	COG1733	regulation of RNA biosynthetic process
PG911_14130	COG1234	tRNA 3'-trailer cleavage
PG911_14175	COG3275	phosphorelay sensor kinase activity
PG911_14180	COG1408	metallophosphoesterase
PG911_14185	COG3279	Response regulator of the LytR AlgR family
PG911_14190	COG1678	Uncharacterized ACR, COG1678
PG911_14220	COG2197	response regulator
PG911_14270	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
PG911_14275	COG0534	Mate efflux family protein
PG911_14285	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
PG911_14345	COG0183	Belongs to the thiolase family
PG911_14350	COG0791	NLP P60 protein
PG911_14360	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PG911_14365	COG0542	response to heat
PG911_14370	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
PG911_14380	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
PG911_14450	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
PG911_14495	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PG911_14515	COG0671	phosphoesterase, PA-phosphatase related
PG911_14520	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PG911_14535	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
PG911_14545	COG0105	UTP biosynthetic process
PG911_14570	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
PG911_14690	COG0348	domain, Protein
PG911_14695	COG2010	Cytochrome c
PG911_14715	COG0635	Involved in the biosynthesis of porphyrin-containing compound
PG911_14725	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PG911_14750	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PG911_14755	COG0085	RNA polymerase activity
PG911_14760	COG0222	ribosome binding
PG911_14765	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PG911_14770	COG0081	regulation of translation
PG911_14775	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PG911_14820	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PG911_14830	COG0828	Belongs to the bacterial ribosomal protein bS21 family
PG911_14835	COG1960	acyl-CoA dehydrogenase activity
PG911_14845	COG1115	amino acid carrier protein
PG911_14865	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
PG911_14900	COG2274	protein secretion by the type I secretion system
PG911_14950	COG1132	(ABC) transporter
PG911_14990	COG1611	Belongs to the LOG family
PG911_15015	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PG911_15025	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
PG911_15050	COG0778	Nitroreductase
PG911_15055	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PG911_15085	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PG911_15120	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
PG911_15145	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
PG911_15150	COG3279	Response regulator of the LytR AlgR family
PG911_15155	COG3275	phosphorelay sensor kinase activity
PG911_15170	COG0791	NLP P60 protein
PG911_15170	COG1388	LysM domain
PG911_15175	COG2515	1-aminocyclopropane-1-carboxylate deaminase
PG911_15190	COG0488	(ABC) transporter
PG911_15220	COG1262	PFAM Formylglycine-generating sulfatase enzyme
PG911_15235	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PG911_15240	COG3604	Transcriptional regulator
PG911_15260	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PG911_15265	COG0459	protein refolding
PG911_15290	COG0820	rRNA (adenine-C2-)-methyltransferase activity
PG911_15295	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PG911_15335	COG0635	Involved in the biosynthesis of porphyrin-containing compound
PG911_15340	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
PG911_15355	COG2205	protein histidine kinase activity
PG911_15360	COG3279	Response regulator of the LytR AlgR family
PG911_15375	COG0308	aminopeptidase N
PG911_15385	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
PG911_15395	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
PG911_15400	COG2363	Small membrane protein
PG911_15415	COG1271	oxidase subunit
PG911_15420	COG1294	oxidase, subunit
PG911_15440	COG1595	DNA-templated transcription, initiation
PG911_15445	COG1595	DNA-templated transcription, initiation
PG911_15460	COG0596	Alpha beta hydrolase
PG911_15465	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
PG911_15485	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
PG911_15505	COG0300	oxidoreductase activity
PG911_15535	COG0519	Catalyzes the synthesis of GMP from XMP
PG911_15545	COG0616	signal peptide processing
PG911_15550	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PG911_15565	COG0308	aminopeptidase N
PG911_15590	COG0612	Peptidase, M16
PG911_15600	COG0436	Aminotransferase
PG911_15605	COG0287	Prephenate dehydrogenase
PG911_15610	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
PG911_15620	COG1162	GTPase activity
PG911_15625	COG1490	D-aminoacyl-tRNA deacylase activity
PG911_15635	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
PG911_15640	COG2353	YceI-like domain
PG911_15645	COG0321	lipoyl(octanoyl) transferase activity
PG911_15680	COG1428	Deoxynucleoside kinase
PG911_15685	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PG911_15700	COG0191	fructose-bisphosphate aldolase activity
PG911_15705	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PG911_15710	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PG911_15715	COG1185	polyribonucleotide nucleotidyltransferase activity
PG911_15725	COG4585	Histidine kinase
PG911_15750	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
PG911_15755	COG0358	DNA primase activity
PG911_15765	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PG911_15775	COG0544	peptidyl-prolyl cis-trans isomerase activity
PG911_15780	COG1950	PFAM Membrane protein of
PG911_15795	COG0596	Alpha beta hydrolase
PG911_15800	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
PG911_15810	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PG911_15820	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PG911_15850	COG2207	Transcriptional regulator
PG911_15850	COG0662	Cupin 2, conserved barrel domain protein
PG911_15855	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PG911_15875	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
PG911_15880	COG0006	proline dipeptidase activity
PG911_15885	COG0006	proline dipeptidase activity
PG911_15900	COG2423	ornithine cyclodeaminase activity
PG911_15935	COG0492	ferredoxin-NADP+ reductase activity
PG911_15960	COG1136	(ABC) transporter
PG911_15960	COG0577	efflux transmembrane transporter activity
PG911_15965	COG2274	protein secretion by the type I secretion system
PG911_15990	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
PG911_16010	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PG911_16025	COG2197	response regulator
PG911_16035	COG4585	Histidine kinase
PG911_16045	COG0101	tRNA pseudouridine synthase activity
PG911_16050	COG1132	(ABC) transporter
PG911_16060	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PG911_16065	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
PG911_16080	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PG911_16115	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
PG911_16120	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
PG911_16120	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
PG911_16130	COG0688	phosphatidylethanolamine metabolic process
PG911_16135	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
PG911_16135	COG1333	cytochrome c biogenesis protein
PG911_16155	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
PG911_16160	COG1262	PFAM Formylglycine-generating sulfatase enzyme
PG911_16170	COG0295	cytidine deaminase activity
PG911_16175	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PG911_16180	COG0519	Catalyzes the synthesis of GMP from XMP
PG911_16180	COG0518	GMP synthase (glutamine-hydrolyzing) activity
PG911_16190	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
PG911_16210	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
PG911_16225	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
PG911_16250	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PG911_16255	COG2089	acid synthase
PG911_16270	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
PG911_16285	COG1086	Polysaccharide biosynthesis protein
PG911_16300	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PG911_16310	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
PG911_16325	COG0285	dihydrofolate synthase activity
PG911_16335	COG0848	biopolymer transport protein
PG911_16340	COG0811	peptide transport
PG911_16345	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
PG911_16355	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
PG911_16360	COG1960	acyl-CoA dehydrogenase activity
PG911_16365	COG0101	tRNA pseudouridine synthase activity
PG911_16370	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PG911_16375	COG0857	belongs to the CobB CobQ family
PG911_16375	COG0280	phosphate acetyltransferase
PG911_16405	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PG911_16410	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PG911_16415	COG0291	Belongs to the bacterial ribosomal protein bL35 family
PG911_16430	COG2759	Belongs to the formate--tetrahydrofolate ligase family
PG911_16435	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
PG911_16440	COG0563	adenylate kinase activity
PG911_16445	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PG911_16465	COG4771	TonB-dependent receptor
PG911_16475	COG2972	Histidine kinase
PG911_16480	COG3279	Response regulator of the LytR AlgR family
PG911_16485	COG0791	NLP P60 protein
PG911_16490	COG0791	NLP P60 protein
PG911_16495	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PG911_16505	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
PG911_16545	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
PG911_16585	COG1032	radical SAM domain protein
PG911_16590	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PG911_16600	COG2095	MarC family integral membrane protein
PG911_16615	COG2873	o-acetylhomoserine
PG911_16620	COG1012	belongs to the aldehyde dehydrogenase family
PG911_16630	COG1522	sequence-specific DNA binding
PG911_16635	COG4206	TonB-dependent receptor
PG911_16635	COG1629	transport
PG911_16640	COG0561	phosphatase activity
PG911_16645	COG3179	chitinase
PG911_16685	COG3179	chitinase
PG911_16710	COG2197	response regulator
PG911_16715	COG1733	regulation of RNA biosynthetic process
PG911_16720	COG1028	Short-chain dehydrogenase reductase Sdr
PG911_16760	COG1522	sequence-specific DNA binding
PG911_16775	COG1757	Na H antiporter
PG911_16795	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PG911_16810	COG2824	Alkylphosphonate utilization operon protein PhnA
PG911_16815	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PG911_16820	COG0228	four-way junction DNA binding
PG911_16940	COG1131	(ABC) transporter
PG911_16945	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PG911_16955	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PG911_16960	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
PG911_16970	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
PG911_16975	COG2086	electron transfer activity
PG911_16980	COG0508	dehydrogenase complex catalyzes the overall conversion of
PG911_16980	COG0022	dehydrogenase e1 component
PG911_16985	COG4771	TonB-dependent receptor
PG911_16990	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
PG911_16995	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
PG911_17000	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PG911_17015	COG2267	carboxylic ester hydrolase activity
PG911_17020	COG0037	tRNA processing
PG911_17025	COG0785	Cytochrome C biogenesis protein
PG911_17035	COG0606	chelatase, subunit chli
PG911_17040	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
PG911_17050	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
PG911_17075	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PG911_17085	COG4771	TonB-dependent receptor
PG911_17110	COG3128	pkhd-type hydroxylase
PG911_17125	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
PG911_17125	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PG911_17135	COG2255	four-way junction helicase activity
PG911_17140	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
PG911_17170	COG0437	4 iron, 4 sulfur cluster binding
PG911_17185	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PG911_17195	COG2166	iron-sulfur cluster assembly
PG911_17200	COG2151	metal-sulfur cluster biosynthetic enzyme
PG911_17215	COG1253	flavin adenine dinucleotide binding
PG911_17245	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PG911_17250	COG1573	uracil-dna glycosylase
PG911_17260	COG0513	Belongs to the DEAD box helicase family
PG911_17305	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PG911_17310	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PG911_17315	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PG911_17320	COG1805	sodium ion transport
PG911_17325	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PG911_17335	COG2967	ApaG domain
PG911_17360	COG1012	belongs to the aldehyde dehydrogenase family
PG911_17365	COG0612	Peptidase, M16
PG911_17370	COG2066	Belongs to the glutaminase family
PG911_17395	COG0513	Belongs to the DEAD box helicase family
PG911_17410	COG2249	NAD(P)H dehydrogenase (quinone) activity
PG911_17415	COG0583	DNA-binding transcription factor activity
PG911_17435	COG0357	Ribosomal RNA small subunit methyltransferase G
PG911_17440	COG3239	Fatty acid desaturase
PG911_17445	COG0436	Aminotransferase
PG911_17460	COG0084	hydrolase, TatD family'
PG911_17470	COG0590	tRNA wobble adenosine to inosine editing
PG911_17475	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PG911_17485	COG0714	Associated with various cellular activities
PG911_17500	COG2304	oxidoreductase activity
PG911_17505	COG2304	oxidoreductase activity
PG911_17545	COG0659	secondary active sulfate transmembrane transporter activity
PG911_17550	COG0288	reversible hydration of carbon dioxide
PG911_17565	COG1028	Short-chain dehydrogenase reductase Sdr
PG911_17575	COG0792	nuclease activity
PG911_17580	COG1619	proteins homologs of microcin C7 resistance protein MccF
PG911_17590	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PG911_17590	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PG911_17645	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PG911_17650	COG0629	single-stranded DNA binding
PG911_17675	COG0469	pyruvate kinase activity
PG911_17680	COG0571	ribonuclease III activity
PG911_17685	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
PG911_17690	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
PG911_17700	COG3341	Caulimovirus viroplasmin
PG911_17700	COG0328	RNA-DNA hybrid ribonuclease activity
PG911_17720	COG0668	transmembrane transport
PG911_17725	COG1214	PFAM Peptidase M22, glycoprotease
PG911_17740	COG2322	membrane
PG911_17745	COG1999	signal sequence binding
PG911_17760	COG1845	cytochrome c oxidase, subunit III
PG911_17765	COG1845	cytochrome c oxidase, subunit III
PG911_17770	COG0109	protoheme IX farnesyltransferase activity
PG911_17810	COG1054	Belongs to the UPF0176 family
PG911_17830	COG2226	methyltransferase
PG911_17850	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
PG911_17860	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PG911_17870	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
PG911_17875	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
PG911_17880	COG0297	glycogen (starch) synthase activity
PG911_17890	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
PG911_17900	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
PG911_17905	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PG911_17920	COG1115	amino acid carrier protein
PG911_17955	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
PG911_17980	COG0584	glycerophosphoryl diester phosphodiesterase
PG911_17990	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
PG911_18005	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
PG911_18010	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
PG911_18015	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PG911_18035	COG1999	signal sequence binding
PG911_18040	COG0750	zinc metalloprotease
PG911_18050	COG0527	aspartate kinase activity
PG911_18050	COG0460	homoserine dehydrogenase
PG911_18065	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
PG911_18085	COG0626	cystathionine gamma-synthase activity
PG911_18140	COG3118	belongs to the thioredoxin family
PG911_18140	COG0492	ferredoxin-NADP+ reductase activity
PG911_18145	COG1408	metallophosphoesterase
PG911_18150	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PG911_18150	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PG911_18175	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
PG911_18200	COG0423	glycine-tRNA ligase activity
PG911_18215	COG1629	transport
PG911_18220	COG0196	riboflavin kinase activity
PG911_18230	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PG911_18250	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
PG911_18255	COG2239	Acts as a magnesium transporter
PG911_18280	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PG911_18285	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PG911_18305	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PG911_18310	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PG911_18315	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PG911_18320	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PG911_18325	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PG911_18330	COG0356	it plays a direct role in the translocation of protons across the membrane
PG911_18375	COG0791	NLP P60 protein
PG911_18375	COG1388	LysM domain
PG911_18380	COG0708	Exodeoxyribonuclease III
PG911_18395	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
PG911_18400	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
PG911_18405	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
PG911_18415	COG1774	PSP1 C-terminal conserved region
PG911_18420	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PG911_18470	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
PG911_18485	COG3384	dioxygenase
PG911_18510	COG0513	Belongs to the DEAD box helicase family
PG911_18520	COG0006	proline dipeptidase activity
PG911_18665	COG1053	succinate dehydrogenase
PG911_18670	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
PG911_18690	COG3275	phosphorelay sensor kinase activity
PG911_18695	COG3279	Response regulator of the LytR AlgR family
PG911_18700	COG0492	ferredoxin-NADP+ reductase activity
PG911_18705	COG2095	MarC family integral membrane protein
PG911_18720	COG1404	Belongs to the peptidase S8 family
PG911_18725	COG0232	Belongs to the dGTPase family. Type 2 subfamily
PG911_18740	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PG911_18740	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PG911_18755	COG1505	serine-type exopeptidase activity
PG911_18760	COG3590	peptidase
PG911_18805	COG4221	oxidoreductase activity
PG911_18820	COG4335	DNA alkylation repair
PG911_18825	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PG911_18855	COG1012	belongs to the aldehyde dehydrogenase family
PG911_18860	COG1446	asparaginase
PG911_18890	COG1309	transcriptional regulator
PG911_18915	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
PG911_18935	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
PG911_18940	COG0756	dUTP diphosphatase activity
PG911_18950	COG1574	metal-dependent hydrolase with the TIM-barrel fold
PG911_18955	COG2207	Transcriptional regulator
PG911_18955	COG3708	Transcriptional regulator
PG911_18970	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PG911_18995	COG1187	pseudouridine synthase activity
PG911_19005	COG2153	protein acetylation
PG911_19010	COG0698	ribose 5-phosphate isomerase