locus-tag	class	description
PG913_00005	COG0557	exoribonuclease II activity
PG913_00015	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PG913_00020	COG0393	Putative heavy-metal-binding
PG913_00035	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
PG913_00040	COG0445	tRNA wobble uridine modification
PG913_00045	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PG913_00055	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PG913_00070	COG0420	3'-5' exonuclease activity
PG913_00075	COG0419	ATPase involved in DNA repair
PG913_00100	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PG913_00105	COG1988	membrane-bound metal-dependent
PG913_00125	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PG913_00125	COG0758	DNA mediated transformation
PG913_00130	COG1607	acyl-coa hydrolase
PG913_00135	COG0628	permease
PG913_00160	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PG913_00180	COG0488	(ABC) transporter
PG913_00215	COG0745	RESPONSE REGULATOR receiver
PG913_00220	COG5002	protein histidine kinase activity
PG913_00235	COG0793	Belongs to the peptidase S41A family
PG913_00240	COG0594	ribonuclease P activity
PG913_00255	COG3338	carbonate dehydratase activity
PG913_00270	COG4585	Histidine kinase
PG913_00280	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PG913_00285	COG0534	Mate efflux family protein
PG913_00290	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
PG913_00295	COG0720	synthase
PG913_00310	COG0193	aminoacyl-tRNA hydrolase activity
PG913_00315	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
PG913_00320	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PG913_00355	COG4067	protein conserved in archaea
PG913_00355	COG0189	ligase activity
PG913_00410	COG0746	molybdenum cofactor guanylyltransferase activity
PG913_00410	COG0315	cyclic pyranopterin monophosphate synthase activity
PG913_00415	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PG913_00420	COG0315	cyclic pyranopterin monophosphate synthase activity
PG913_00425	COG0303	'Molybdopterin
PG913_00430	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
PG913_00460	COG1530	ribonuclease E activity
PG913_00465	COG0776	regulation of translation
PG913_00475	COG0629	single-stranded DNA binding
PG913_00495	COG2608	mercury ion transmembrane transporter activity
PG913_00505	COG0612	Peptidase, M16
PG913_00510	COG0612	Peptidase, M16
PG913_00515	COG0261	This protein binds to 23S rRNA in the presence of protein L20
PG913_00525	COG3279	Response regulator of the LytR AlgR family
PG913_00540	COG0745	RESPONSE REGULATOR receiver
PG913_00540	COG2972	Histidine kinase
PG913_00550	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PG913_00555	COG1418	mRNA catabolic process
PG913_00560	COG1024	Enoyl-CoA hydratase
PG913_00570	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PG913_00595	COG2267	carboxylic ester hydrolase activity
PG913_00600	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PG913_00615	COG0220	tRNA (guanine-N7-)-methyltransferase activity
PG913_00625	COG0489	protein tyrosine kinase activity
PG913_00635	COG0633	Ferredoxin
PG913_00640	COG0716	FMN binding
PG913_00660	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
PG913_00665	COG3185	4-Hydroxyphenylpyruvate dioxygenase
PG913_00670	COG3483	tryptophan 2,3-dioxygenase activity
PG913_00680	COG0739	heme binding
PG913_00685	COG0166	Belongs to the GPI family
PG913_00690	COG4206	TonB-dependent receptor
PG913_00690	COG1629	transport
PG913_00725	COG0314	molybdopterin synthase activity
PG913_00730	COG0126	phosphoglycerate kinase activity
PG913_00735	COG0667	Aldo Keto reductase
PG913_00745	COG0180	Tryptophanyl-tRNA synthetase
PG913_00760	COG2954	triphosphatase activity
PG913_00765	COG1381	Involved in DNA repair and RecF pathway recombination
PG913_00775	COG2814	Major facilitator Superfamily
PG913_00795	COG0840	transmembrane signaling receptor activity
PG913_00800	COG0840	transmembrane signaling receptor activity
PG913_00810	COG0632	four-way junction helicase activity
PG913_00820	COG0509	glycine decarboxylation via glycine cleavage system
PG913_00845	COG1215	transferase activity, transferring glycosyl groups
PG913_00865	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
PG913_00890	COG0463	Glycosyl transferase, family 2
PG913_00895	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
PG913_00920	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PG913_00935	COG1858	cytochrome C peroxidase
PG913_00945	COG4771	TonB-dependent receptor
PG913_00960	COG0495	leucyl-tRNA aminoacylation
PG913_00980	COG1946	Acyl-CoA thioesterase
PG913_00985	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
PG913_00985	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
PG913_00995	COG1970	mechanosensitive ion channel activity
PG913_01000	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PG913_01005	COG1435	thymidine kinase activity
PG913_01025	COG0779	Required for maturation of 30S ribosomal subunits
PG913_01030	COG2251	uridine kinase activity
PG913_01030	COG0195	Participates in both transcription termination and antitermination
PG913_01035	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PG913_01130	COG4771	TonB-dependent receptor
PG913_01140	COG0803	Belongs to the bacterial solute-binding protein 9 family
PG913_01145	COG1121	(ABC) transporter
PG913_01150	COG1108	ABC-type Mn2 Zn2 transport systems permease components
PG913_01155	COG1108	ABC-type Mn2 Zn2 transport systems permease components
PG913_01160	COG1074	ATP-dependent DNA helicase activity
PG913_01165	COG0156	8-amino-7-oxononanoate synthase activity
PG913_01175	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PG913_01185	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PG913_01190	COG4122	O-methyltransferase activity
PG913_01200	COG1595	DNA-templated transcription, initiation
PG913_01210	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PG913_01230	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
PG913_01235	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
PG913_01245	COG0156	8-amino-7-oxononanoate synthase activity
PG913_01265	COG0508	dehydrogenase complex catalyzes the overall conversion of
PG913_01300	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
PG913_01310	COG0719	Fe-S assembly protein
PG913_01315	COG0396	ATPase activity
PG913_01320	COG0719	Fe-S assembly protein
PG913_01325	COG0316	Belongs to the HesB IscA family
PG913_01330	COG1858	cytochrome C peroxidase
PG913_01350	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
PG913_01355	COG1652	LysM domain
PG913_01360	COG1561	YicC-like family, N-terminal region
PG913_01365	COG0194	GDP metabolic process
PG913_01370	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PG913_01375	COG4942	peptidase
PG913_01385	COG5002	protein histidine kinase activity
PG913_01395	COG2205	protein histidine kinase activity
PG913_01400	COG3279	Response regulator of the LytR AlgR family
PG913_01405	COG0793	Belongs to the peptidase S41A family
PG913_01420	COG1522	sequence-specific DNA binding
PG913_01435	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
PG913_01440	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PG913_01455	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PG913_01470	COG2391	methyltransferase activity
PG913_01480	COG0439	Biotin carboxylase
PG913_01485	COG0511	ligase activity, forming carbon-carbon bonds
PG913_01490	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PG913_01495	COG0333	Belongs to the bacterial ribosomal protein bL32 family
PG913_01505	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
PG913_01515	COG1028	Short-chain dehydrogenase reductase Sdr
PG913_01525	COG3734	2-keto-3-deoxy-galactonokinase
PG913_01540	COG0800	Aldolase
PG913_01545	COG0129	dihydroxy-acid dehydratase activity
PG913_01555	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PG913_01560	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PG913_01595	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PG913_01625	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PG913_01630	COG1968	undecaprenyl-diphosphatase activity
PG913_01640	COG2177	Part of the ABC transporter FtsEX involved in
PG913_01645	COG0346	lactoylglutathione lyase activity
PG913_01655	COG4585	Histidine kinase
PG913_01660	COG2197	response regulator
PG913_01665	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PG913_01670	COG4591	ABC-type transport system involved in lipoprotein release permease component
PG913_01700	COG0481	GTPase activity
PG913_01715	COG0252	asparaginase activity
PG913_01720	COG0252	asparaginase activity
PG913_01725	COG0811	peptide transport
PG913_01735	COG0848	biopolymer transport protein
PG913_01760	COG0017	Asparaginyl-tRNA synthetase
PG913_01780	COG0233	cytoplasmic translational termination
PG913_01785	COG0528	UMP kinase activity
PG913_01790	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PG913_01795	COG0052	Belongs to the universal ribosomal protein uS2 family
PG913_01800	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
PG913_01805	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PG913_01815	COG1477	protein flavinylation
PG913_01820	COG2226	methyltransferase
PG913_01830	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PG913_01840	COG3186	Phenylalanine-4-hydroxylase
PG913_01915	COG0302	gtp cyclohydrolase
PG913_01935	COG0386	Belongs to the glutathione peroxidase family
PG913_01945	COG0415	Belongs to the DNA photolyase family
PG913_01950	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PG913_01965	COG4206	TonB-dependent receptor
PG913_01965	COG1629	transport
PG913_02000	COG3540	Alkaline phosphatase
PG913_02010	COG2363	Small membrane protein
PG913_02025	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PG913_02030	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PG913_02045	COG1160	GTP binding
PG913_02055	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PG913_02070	COG0302	gtp cyclohydrolase
PG913_02075	COG0386	Belongs to the glutathione peroxidase family
PG913_02145	COG0702	epimerase
PG913_02150	COG4771	TonB-dependent receptor
PG913_02155	COG4771	TonB-dependent receptor
PG913_02160	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
PG913_02160	COG3408	Glycogen debranching enzyme
PG913_02165	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
PG913_02170	COG3250	beta-galactosidase activity
PG913_02175	COG0006	proline dipeptidase activity
PG913_02180	COG0006	proline dipeptidase activity
PG913_02185	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
PG913_02195	COG3938	Belongs to the proline racemase family
PG913_02215	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
PG913_02235	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PG913_02245	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PG913_02255	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
PG913_02260	COG0596	Alpha beta hydrolase
PG913_02265	COG1950	PFAM Membrane protein of
PG913_02270	COG0544	peptidyl-prolyl cis-trans isomerase activity
PG913_02280	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PG913_02290	COG0358	DNA primase activity
PG913_02300	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
PG913_02320	COG1185	polyribonucleotide nucleotidyltransferase activity
PG913_02325	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PG913_02330	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PG913_02335	COG0191	fructose-bisphosphate aldolase activity
PG913_02345	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PG913_02350	COG1428	Deoxynucleoside kinase
PG913_02360	COG0321	lipoyl(octanoyl) transferase activity
PG913_02370	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
PG913_02405	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
PG913_02415	COG0436	Aminotransferase
PG913_02450	COG0280	phosphate acetyltransferase
PG913_02450	COG0857	belongs to the CobB CobQ family
PG913_02455	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PG913_02460	COG0101	tRNA pseudouridine synthase activity
PG913_02465	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PG913_02475	COG0463	Glycosyl transferase, family 2
PG913_02480	COG1960	acyl-CoA dehydrogenase activity
PG913_02495	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
PG913_02500	COG0811	peptide transport
PG913_02505	COG0848	biopolymer transport protein
PG913_02515	COG0285	dihydrofolate synthase activity
PG913_02540	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
PG913_02570	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
PG913_02575	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
PG913_02600	COG0438	transferase activity, transferring glycosyl groups
PG913_02620	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
PG913_02630	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
PG913_02635	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
PG913_02640	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PG913_02660	COG0518	GMP synthase (glutamine-hydrolyzing) activity
PG913_02660	COG0519	Catalyzes the synthesis of GMP from XMP
PG913_02670	COG0295	cytidine deaminase activity
PG913_02680	COG1262	PFAM Formylglycine-generating sulfatase enzyme
PG913_02685	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
PG913_02700	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
PG913_02700	COG1333	cytochrome c biogenesis protein
PG913_02705	COG0688	phosphatidylethanolamine metabolic process
PG913_02720	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
PG913_02730	COG0572	uridine kinase
PG913_02755	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PG913_02775	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PG913_02785	COG1132	(ABC) transporter
PG913_02790	COG0101	tRNA pseudouridine synthase activity
PG913_02800	COG2198	Histidine kinase
PG913_02800	COG0643	Histidine kinase
PG913_02825	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PG913_02850	COG0492	ferredoxin-NADP+ reductase activity
PG913_02860	COG2866	Carboxypeptidase
PG913_02865	COG0450	alkyl hydroperoxide reductase
PG913_02870	COG1960	acyl-CoA dehydrogenase activity
PG913_02875	COG0183	Belongs to the thiolase family
PG913_02880	COG1250	3-hydroxyacyl-CoA dehydrogenase
PG913_02880	COG1024	Enoyl-CoA hydratase
PG913_02890	COG4152	abc transporter atp-binding protein
PG913_02895	COG1668	transmembrane transport
PG913_02900	COG3264	Mechanosensitive ion channel
PG913_02900	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
PG913_02910	COG0450	alkyl hydroperoxide reductase
PG913_02940	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PG913_02945	COG0778	Nitroreductase
PG913_02965	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PG913_02980	COG1611	Belongs to the LOG family
PG913_03005	COG1115	amino acid carrier protein
PG913_03015	COG1960	acyl-CoA dehydrogenase activity
PG913_03020	COG0828	Belongs to the bacterial ribosomal protein bS21 family
PG913_03055	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PG913_03075	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PG913_03080	COG0081	regulation of translation
PG913_03085	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PG913_03090	COG0222	ribosome binding
PG913_03095	COG0085	RNA polymerase activity
PG913_03100	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PG913_03125	COG0635	Involved in the biosynthesis of porphyrin-containing compound
PG913_03145	COG1678	Uncharacterized ACR, COG1678
PG913_03155	COG4771	TonB-dependent receptor
PG913_03180	COG1595	DNA-templated transcription, initiation
PG913_03190	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PG913_03195	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
PG913_03210	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
PG913_03220	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
PG913_03225	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
PG913_03235	COG0681	Belongs to the peptidase S26 family
PG913_03240	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
PG913_03250	COG0592	DNA-directed DNA polymerase activity
PG913_03310	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PG913_03315	COG1663	tetraacyldisaccharide 4'-kinase activity
PG913_03335	COG1028	Short-chain dehydrogenase reductase Sdr
PG913_03350	COG0254	rRNA binding
PG913_03355	COG0069	glutamate synthase activity
PG913_03360	COG2813	Specifically methylates the guanine in position
PG913_03375	COG0076	glutamate decarboxylase activity
PG913_03380	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
PG913_03380	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
PG913_03390	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
PG913_03425	COG1028	Short-chain dehydrogenase reductase Sdr
PG913_03430	COG1917	Cupin 2, conserved barrel domain protein
PG913_03450	COG2274	protein secretion by the type I secretion system
PG913_03470	COG4589	Belongs to the CDS family
PG913_03490	COG0799	negative regulation of ribosome biogenesis
PG913_03495	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
PG913_03495	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
PG913_03510	COG0443	Heat shock 70 kDa protein
PG913_03515	COG0681	Belongs to the peptidase S26 family
PG913_03565	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PG913_03685	COG0326	Molecular chaperone. Has ATPase activity
PG913_03710	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PG913_03730	COG1234	tRNA 3'-trailer cleavage
PG913_03745	COG0540	Belongs to the ATCase OTCase family
PG913_03750	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PG913_03755	COG0659	secondary active sulfate transmembrane transporter activity
PG913_03765	COG0783	Belongs to the Dps family
PG913_03770	COG1253	flavin adenine dinucleotide binding
PG913_03780	COG1858	cytochrome C peroxidase
PG913_03805	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
PG913_03820	COG1132	(ABC) transporter
PG913_03840	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
PG913_03845	COG0745	RESPONSE REGULATOR receiver
PG913_03850	COG5002	protein histidine kinase activity
PG913_03890	COG1702	phosphate starvation-inducible protein PhoH
PG913_03895	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
PG913_03905	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
PG913_03950	COG1278	Cold shock
PG913_03955	COG1278	Cold shock
PG913_03960	COG1278	Cold shock
PG913_03965	COG4895	conserved protein (DUF2196)
PG913_03980	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PG913_03990	COG2329	Antibiotic biosynthesis monooxygenase
PG913_04000	COG4166	transmembrane transport
PG913_04035	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PG913_04045	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
PG913_04070	COG0300	oxidoreductase activity
PG913_04075	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PG913_04080	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
PG913_04085	COG2996	Protein conserved in bacteria
PG913_04105	COG1546	Belongs to the CinA family
PG913_04105	COG1058	Belongs to the CinA family
PG913_04110	COG0227	Belongs to the bacterial ribosomal protein bL28 family
PG913_04115	COG0267	Belongs to the bacterial ribosomal protein bL33 family
PG913_04125	COG0552	protein localization to endoplasmic reticulum
PG913_04130	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PG913_04150	COG1136	(ABC) transporter
PG913_04160	COG0045	succinate-CoA ligase (ADP-forming) activity
PG913_04180	COG0556	nucleotide-excision repair
PG913_04210	COG0237	dephospho-CoA kinase activity
PG913_04220	COG1862	Preprotein translocase
PG913_04230	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PG913_04240	COG1132	(ABC) transporter
PG913_04255	COG2050	protein possibly involved in aromatic compounds catabolism
PG913_04265	COG0009	L-threonylcarbamoyladenylate synthase
PG913_04285	COG0488	(ABC) transporter
PG913_04290	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PG913_04310	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PG913_04330	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PG913_04340	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PG913_04365	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
PG913_04380	COG0302	gtp cyclohydrolase
PG913_04385	COG0523	cobalamin synthesis protein
PG913_04410	COG1595	DNA-templated transcription, initiation
PG913_04425	COG3022	response to hydroperoxide
PG913_04430	COG2949	membrane
PG913_04440	COG1760	l-serine dehydratase
PG913_04465	COG0251	oxidation-reduction process
PG913_04470	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
PG913_04475	COG0860	N-Acetylmuramoyl-L-alanine amidase
PG913_04495	COG0247	lactate metabolic process
PG913_04495	COG2181	nitrate reductase activity
PG913_04500	COG1575	Belongs to the MenA family. Type 1 subfamily
PG913_04505	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
PG913_04515	COG4948	Mandelate Racemase Muconate Lactonizing
PG913_04520	COG1266	CAAX protease self-immunity
PG913_04525	COG0318	PFAM AMP-dependent synthetase and ligase
PG913_04535	COG0217	transcriptional regulatory protein
PG913_04550	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
PG913_04595	COG1522	sequence-specific DNA binding
PG913_04600	COG0076	glutamate decarboxylase activity
PG913_04605	COG0446	pyridine nucleotide-disulphide oxidoreductase
PG913_04605	COG1902	pentaerythritol trinitrate reductase activity
PG913_04610	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PG913_04620	COG0488	(ABC) transporter
PG913_04650	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PG913_04655	COG0018	arginyl-trna synthetase
PG913_04690	COG0482	sulfurtransferase activity
PG913_04700	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
PG913_04700	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
PG913_04715	COG1674	ftsk spoiiie
PG913_04730	COG0534	Mate efflux family protein
PG913_04765	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PG913_04780	COG0653	protein targeting
PG913_04795	COG0824	Thioesterase
PG913_04800	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PG913_04805	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PG913_04810	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PG913_04820	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PG913_04830	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PG913_04835	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PG913_04850	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PG913_04855	COG1028	Short-chain dehydrogenase reductase Sdr
PG913_04860	COG3956	TIGRFAM MazG family protein
PG913_04870	COG0242	peptide deformylase activity
PG913_04885	COG0463	Glycosyl transferase, family 2
PG913_04905	COG2089	acid synthase
PG913_04915	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
PG913_04920	COG1861	Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase
PG913_04930	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
PG913_04935	COG1086	Polysaccharide biosynthesis protein
PG913_04940	COG1086	Polysaccharide biosynthesis protein
PG913_04945	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
PG913_04945	COG0517	IMP dehydrogenase activity
PG913_04945	COG0617	tRNA 3'-terminal CCA addition
PG913_04950	COG1132	(ABC) transporter
PG913_04955	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PG913_04960	COG0463	Glycosyl transferase, family 2
PG913_04975	COG4974	Belongs to the 'phage' integrase family
PG913_04985	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
PG913_05000	COG1183	phosphatidylcholine synthase activity
PG913_05005	COG1137	ATPase activity
PG913_05015	COG0805	protein transport
PG913_05025	COG0514	ATP-dependent DNA helicase (RecQ)
PG913_05045	COG0802	atpase or kinase
PG913_05055	COG1078	dGTPase activity
PG913_05060	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PG913_05070	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PG913_05075	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PG913_05085	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
PG913_05100	COG2096	Adenosyltransferase
PG913_05105	COG1797	cobyrinic acid a,c-diamide synthase activity
PG913_05110	COG1239	Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX
PG913_05120	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
PG913_05140	COG0778	Nitroreductase
PG913_05160	COG1648	precorrin-2 dehydrogenase activity
PG913_05160	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
PG913_05185	COG1492	cobalamin metabolic process
PG913_05205	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PG913_05215	COG1217	gtp-binding protein TYPA
PG913_05225	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
PG913_05230	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PG913_05235	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PG913_05240	COG0131	Imidazoleglycerol-phosphate dehydratase
PG913_05250	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PG913_05255	COG0107	imidazoleglycerol-phosphate synthase activity
PG913_05280	COG4771	TonB-dependent receptor
PG913_05290	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PG913_05295	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PG913_05300	COG0012	GTP binding
PG913_05325	COG2860	membrane
PG913_05330	COG1705	Flagellar rod assembly protein muramidase FlgJ
PG913_05330	COG1388	LysM domain
PG913_05340	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PG913_05360	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PG913_05385	COG0596	Alpha beta hydrolase
PG913_05390	COG0513	Belongs to the DEAD box helicase family
PG913_05440	COG1301	dicarboxylic acid transport
PG913_05460	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PG913_05465	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PG913_05470	COG0484	heat shock protein binding
PG913_05485	COG1028	Short-chain dehydrogenase reductase Sdr
PG913_05515	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PG913_05520	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PG913_05525	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
PG913_05540	COG3958	Transketolase
PG913_05545	COG0424	maF-like protein
PG913_05555	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
PG913_05560	COG0542	response to heat
PG913_05580	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PG913_05610	COG1278	Cold shock
PG913_05635	COG1309	transcriptional regulator
PG913_05645	COG1522	sequence-specific DNA binding
PG913_05650	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
PG913_05655	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PG913_05660	COG0513	Belongs to the DEAD box helicase family
PG913_05665	COG0564	pseudouridine synthase activity
PG913_05690	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PG913_05695	COG0539	negative regulation of cytoplasmic translation
PG913_05710	COG1739	Uncharacterized protein family UPF0029
PG913_05715	COG0697	spore germination
PG913_05735	COG2890	protein-(glutamine-N5) methyltransferase activity
PG913_05745	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
PG913_05780	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
PG913_05795	COG0167	dihydroorotate dehydrogenase activity
PG913_05820	COG1363	Peptidase, m42
PG913_05860	COG0488	(ABC) transporter
PG913_05905	COG1607	acyl-coa hydrolase
PG913_05915	COG2346	COG2346, Truncated hemoglobins
PG913_05945	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PG913_05950	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PG913_06000	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PG913_06010	COG1690	Belongs to the RtcB family
PG913_06035	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PG913_06035	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
PG913_06040	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
PG913_06045	COG0668	transmembrane transport
PG913_06050	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PG913_06080	COG0813	purine-nucleoside phosphorylase activity
PG913_06095	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
PG913_06110	COG1250	3-hydroxyacyl-CoA dehydrogenase
PG913_06125	COG3420	alginic acid biosynthetic process
PG913_06130	COG2373	Large extracellular alpha-helical protein
PG913_06150	COG2885	chlorophyll binding
PG913_06165	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PG913_06205	COG3177	Filamentation induced by cAMP protein fic
PG913_06210	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
PG913_06235	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
PG913_06265	COG0668	transmembrane transport
PG913_06290	COG0517	IMP dehydrogenase activity
PG913_06290	COG0516	GMP reductase activity
PG913_06345	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
PG913_06385	COG3842	ATPase activity
PG913_06390	COG1175	transmembrane transport
PG913_06395	COG1840	ABC-type Fe3 transport system, periplasmic component
PG913_06435	COG1595	DNA-templated transcription, initiation
PG913_06475	COG0436	Aminotransferase
PG913_06480	COG0812	UDP-N-acetylmuramate dehydrogenase activity
PG913_06525	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
PG913_06535	COG3876	Protein conserved in bacteria
PG913_06550	COG3340	Belongs to the peptidase S51 family
PG913_06585	COG0714	Associated with various cellular activities
PG913_06590	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
PG913_06600	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
PG913_06615	COG0514	ATP-dependent DNA helicase (RecQ)
PG913_06620	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PG913_06625	COG0776	regulation of translation
PG913_06635	COG0116	Belongs to the methyltransferase superfamily
PG913_06655	COG0602	queuosine metabolic process
PG913_06660	COG0825	malonyl-CoA metabolic process
PG913_06680	COG0343	queuine tRNA-ribosyltransferase activity
PG913_06685	COG1187	pseudouridine synthase activity
PG913_06725	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
PG913_06730	COG0564	pseudouridine synthase activity
PG913_06740	COG1181	Belongs to the D-alanine--D-alanine ligase family
PG913_06745	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PG913_06770	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PG913_06775	COG1482	cell wall glycoprotein biosynthetic process
PG913_06785	COG0745	RESPONSE REGULATOR receiver
PG913_06830	COG3279	Response regulator of the LytR AlgR family
PG913_06840	COG2205	protein histidine kinase activity
PG913_06850	COG4251	negative regulation of phosphorylation
PG913_06860	COG0784	Response regulator, receiver
PG913_06885	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
PG913_06910	COG3012	SEC-C Motif Domain Protein
PG913_06925	COG0083	homoserine kinase activity
PG913_06930	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
PG913_06935	COG1022	Amp-dependent synthetase and ligase
PG913_06950	COG2270	Major facilitator Superfamily
PG913_06970	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PG913_06975	COG4771	TonB-dependent receptor
PG913_06980	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
PG913_06990	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PG913_06995	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
PG913_07015	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
PG913_07020	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PG913_07030	COG0697	spore germination
PG913_07040	COG3959	Transketolase, thiamine diphosphate binding domain
PG913_07075	COG2195	Cleaves the N-terminal amino acid of tripeptides
PG913_07080	COG0019	diaminopimelate decarboxylase activity
PG913_07090	COG0359	binds to the 23S rRNA
PG913_07095	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PG913_07100	COG0360	Binds together with S18 to 16S ribosomal RNA
PG913_07105	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PG913_07115	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PG913_07120	COG0076	glutamate decarboxylase activity
PG913_07130	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
PG913_07135	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
PG913_07140	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PG913_07145	COG0440	acetolactate synthase activity
PG913_07150	COG0028	Belongs to the TPP enzyme family
PG913_07155	COG0129	dihydroxy-acid dehydratase activity
PG913_07165	COG0066	3-isopropylmalate dehydratase activity
PG913_07170	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PG913_07175	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PG913_07185	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
PG913_07190	COG1410	methionine synthase
PG913_07190	COG0646	methionine synthase
PG913_07195	COG1410	methionine synthase
PG913_07195	COG0646	methionine synthase
PG913_07205	COG1045	serine acetyltransferase
PG913_07210	COG0633	Ferredoxin
PG913_07215	COG0492	ferredoxin-NADP+ reductase activity
PG913_07220	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
PG913_07220	COG1648	precorrin-2 dehydrogenase activity
PG913_07225	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
PG913_07230	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
PG913_07235	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
PG913_07245	COG0175	sulfate reduction
PG913_07250	COG0175	sulfate reduction
PG913_07260	COG1959	2 iron, 2 sulfur cluster binding
PG913_07270	COG0460	homoserine dehydrogenase
PG913_07270	COG0527	aspartate kinase activity
PG913_07280	COG1228	amidohydrolase
PG913_07310	COG3279	Response regulator of the LytR AlgR family
PG913_07325	COG2972	Histidine kinase
PG913_07345	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PG913_07350	COG1393	Belongs to the ArsC family
PG913_07360	COG0463	Glycosyl transferase, family 2
PG913_07360	COG1216	Glycosyl transferase, family 2
PG913_07370	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
PG913_07375	COG0497	DNA recombination
PG913_07400	COG1528	Iron-storage protein
PG913_07405	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PG913_07425	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PG913_07435	COG0404	The glycine cleavage system catalyzes the degradation of glycine
PG913_07445	COG1136	(ABC) transporter
PG913_07445	COG0577	efflux transmembrane transporter activity
PG913_07450	COG1136	(ABC) transporter
PG913_07450	COG0577	efflux transmembrane transporter activity
PG913_07455	COG1136	(ABC) transporter
PG913_07460	COG3011	Protein conserved in bacteria
PG913_07470	COG4206	TonB-dependent receptor
PG913_07480	COG2087	Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate
PG913_07485	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
PG913_07490	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
PG913_07495	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
PG913_07505	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
PG913_07585	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PG913_07595	COG1595	DNA-templated transcription, initiation
PG913_07620	COG1607	acyl-coa hydrolase
PG913_07630	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PG913_07645	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
PG913_07650	COG0230	Belongs to the bacterial ribosomal protein bL34 family
PG913_07655	COG0504	CTP synthase activity
PG913_07700	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PG913_07705	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
PG913_07710	COG0215	cysteine-tRNA ligase activity
PG913_07715	COG1703	isobutyryl-CoA mutase activity
PG913_07745	COG1090	epimerase
PG913_07755	COG0508	dehydrogenase complex catalyzes the overall conversion of
PG913_07780	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
PG913_07785	COG0113	porphobilinogen synthase activity
PG913_07795	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
PG913_07815	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
PG913_07825	COG1981	membrane
PG913_07835	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PG913_07840	COG2195	Cleaves the N-terminal amino acid of tripeptides
PG913_07880	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
PG913_07885	COG0564	pseudouridine synthase activity
PG913_07890	COG0336	Belongs to the RNA methyltransferase TrmD family
PG913_07895	COG0335	large ribosomal subunit rRNA binding
PG913_07905	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PG913_07960	COG1418	mRNA catabolic process
PG913_08000	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
PG913_08005	COG4680	protein conserved in bacteria
PG913_08065	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PG913_08185	COG3392	D12 class N6 adenine-specific DNA methyltransferase
PG913_08460	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
PG913_08565	COG0270	DNA (cytosine-5-)-methyltransferase activity
PG913_08645	COG4774	siderophore transport
PG913_08745	COG4680	protein conserved in bacteria
PG913_08810	COG1408	metallophosphoesterase
PG913_08875	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
PG913_08930	COG1278	Cold shock
PG913_08945	COG0302	gtp cyclohydrolase
PG913_08950	COG0124	histidyl-tRNA synthetase
PG913_08955	COG1295	ribonuclease BN
PG913_08980	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PG913_08990	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PG913_08995	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PG913_09000	COG1120	ATPase activity
PG913_09005	COG2234	aminopeptidase activity
PG913_09015	COG0300	oxidoreductase activity
PG913_09045	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
PG913_09050	COG2022	thiamine diphosphate biosynthetic process
PG913_09055	COG0352	thiamine-phosphate diphosphorylase activity
PG913_09070	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
PG913_09080	COG0010	Belongs to the arginase family
PG913_09090	COG0148	phosphopyruvate hydratase activity
PG913_09095	COG0505	Belongs to the CarA family
PG913_09100	COG0203	ribosomal protein L17
PG913_09110	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PG913_09120	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PG913_09125	COG0257	Belongs to the bacterial ribosomal protein bL36 family
PG913_09130	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PG913_09140	COG0200	Binds to the 23S rRNA
PG913_09145	COG1841	ribosomal large subunit assembly
PG913_09150	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PG913_09155	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PG913_09160	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PG913_09165	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PG913_09175	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PG913_09180	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PG913_09185	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PG913_09190	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PG913_09195	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PG913_09200	COG0255	Belongs to the universal ribosomal protein uL29 family
PG913_09205	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PG913_09210	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PG913_09215	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PG913_09220	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PG913_09225	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PG913_09230	COG0089	rRNA binding
PG913_09235	COG0088	Forms part of the polypeptide exit tunnel
PG913_09240	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PG913_09245	COG0051	transcription antitermination factor activity, RNA binding
PG913_09255	COG0049	tRNA binding
PG913_09260	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PG913_09265	COG4771	TonB-dependent receptor
PG913_09275	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PG913_09285	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
PG913_09295	COG1011	Hydrolase
PG913_09305	COG0569	domain protein
PG913_09310	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
PG913_09330	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
PG913_09360	COG2877	3-deoxy-8-phosphooctulonate synthase activity
PG913_09395	COG0010	Belongs to the arginase family
PG913_09415	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PG913_09430	COG0277	FAD linked oxidase domain protein
PG913_09430	COG0247	lactate metabolic process
PG913_09450	COG2072	flavoprotein involved in K transport
PG913_09490	COG0589	response to stress
PG913_09505	COG0348	domain, Protein
PG913_09510	COG2010	Cytochrome c
PG913_09540	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
PG913_09550	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
PG913_09570	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
PG913_09590	COG1842	Phage shock protein A
PG913_09600	COG1396	sequence-specific DNA binding
PG913_09700	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
PG913_09725	COG0671	phosphoesterase, PA-phosphatase related
PG913_09730	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PG913_09745	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
PG913_09750	COG0105	UTP biosynthetic process
PG913_09755	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
PG913_09765	COG0259	pyridoxamine-phosphate oxidase activity
PG913_09780	COG2885	chlorophyll binding
PG913_09780	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
PG913_09795	COG1215	transferase activity, transferring glycosyl groups
PG913_09815	COG3579	cysteine-type endopeptidase activity
PG913_09830	COG1017	nitric oxide dioxygenase activity
PG913_09830	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
PG913_09835	COG1017	nitric oxide dioxygenase activity
PG913_09835	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
PG913_09850	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
PG913_09905	COG2264	protein methyltransferase activity
PG913_09910	COG0149	triose-phosphate isomerase activity
PG913_09920	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
PG913_09930	COG0601	transmembrane transport
PG913_09935	COG0284	orotidine-5'-phosphate decarboxylase activity
PG913_09970	COG2986	histidine ammonia-lyase
PG913_10000	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PG913_10015	COG0159	tryptophan synthase activity
PG913_10020	COG0133	tryptophan synthase activity
PG913_10025	COG0135	phosphoribosylanthranilate isomerase activity
PG913_10030	COG0134	indole-3-glycerol-phosphate synthase activity
PG913_10035	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PG913_10040	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PG913_10040	COG0512	Glutamine amidotransferase of anthranilate synthase
PG913_10045	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PG913_10050	COG0367	asparagine synthase
PG913_10055	COG0187	DNA topoisomerase II activity
PG913_10060	COG0039	L-malate dehydrogenase activity
PG913_10065	COG2884	Cell division ATP-binding protein ftsE
PG913_10085	COG1595	DNA-templated transcription, initiation
PG913_10105	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
PG913_10140	COG0183	Belongs to the thiolase family
PG913_10145	COG0791	NLP P60 protein
PG913_10160	COG0542	response to heat
PG913_10165	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
PG913_10200	COG2733	membrane
PG913_10215	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
PG913_10235	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PG913_10265	COG1032	radical SAM domain protein
PG913_10290	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
PG913_10295	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
PG913_10335	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
PG913_10345	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PG913_10350	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PG913_10355	COG4115	mRNA cleavage
PG913_10360	COG2161	toxin-antitoxin pair type II binding
PG913_10365	COG0339	signal peptide processing
PG913_10380	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PG913_10385	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
PG913_10415	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
PG913_10435	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
PG913_10440	COG1705	Flagellar rod assembly protein muramidase FlgJ
PG913_10440	COG1388	LysM domain
PG913_10445	COG2515	1-aminocyclopropane-1-carboxylate deaminase
PG913_10455	COG0488	(ABC) transporter
PG913_10485	COG1262	PFAM Formylglycine-generating sulfatase enzyme
PG913_10500	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PG913_10505	COG3604	Transcriptional regulator
PG913_10520	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PG913_10525	COG0459	protein refolding
PG913_10545	COG0820	rRNA (adenine-C2-)-methyltransferase activity
PG913_10550	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PG913_10570	COG2814	Major facilitator Superfamily
PG913_10580	COG0635	Involved in the biosynthesis of porphyrin-containing compound
PG913_10590	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
PG913_10595	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
PG913_10600	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
PG913_10605	COG2363	Small membrane protein
PG913_10625	COG1271	oxidase subunit
PG913_10630	COG1294	oxidase, subunit
PG913_10640	COG0596	Alpha beta hydrolase
PG913_10645	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
PG913_10660	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
PG913_10660	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
PG913_10665	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
PG913_10690	COG0519	Catalyzes the synthesis of GMP from XMP
PG913_10695	COG0616	signal peptide processing
PG913_10705	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PG913_10750	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PG913_10755	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PG913_10760	COG0291	Belongs to the bacterial ribosomal protein bL35 family
PG913_10775	COG2759	Belongs to the formate--tetrahydrofolate ligase family
PG913_10780	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
PG913_10785	COG0563	adenylate kinase activity
PG913_10790	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PG913_10805	COG2249	NAD(P)H dehydrogenase (quinone) activity
PG913_10810	COG0791	NLP P60 protein
PG913_10815	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PG913_10825	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
PG913_10875	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
PG913_10890	COG4232	protein-disulfide reductase activity
PG913_10895	COG3104	oligopeptide transport
PG913_10905	COG1506	peptidase
PG913_10905	COG0823	Involved in the tonB-independent uptake of proteins
PG913_10920	COG2081	HI0933 family
PG913_10945	COG1629	transport
PG913_10980	COG1187	pseudouridine synthase activity
PG913_11005	COG0138	bifunctional purine biosynthesis protein purh
PG913_11010	COG1077	Cell shape determining protein MreB Mrl
PG913_11025	COG0768	penicillin binding
PG913_11030	COG0772	Belongs to the SEDS family
PG913_11045	COG0268	Binds directly to 16S ribosomal RNA
PG913_11060	COG0442	prolyl-tRNA aminoacylation
PG913_11075	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
PG913_11080	COG2226	methyltransferase
PG913_11100	COG1595	DNA-templated transcription, initiation
PG913_11105	COG1595	DNA-templated transcription, initiation
PG913_11110	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PG913_11115	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
PG913_11120	COG0517	IMP dehydrogenase activity
PG913_11155	COG1610	YqeY-like protein
PG913_11160	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PG913_11175	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
PG913_11180	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PG913_11185	COG0772	Belongs to the SEDS family
PG913_11190	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PG913_11195	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PG913_11200	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PG913_11205	COG0768	penicillin binding
PG913_11215	COG0275	rRNA processing
PG913_11220	COG2001	Belongs to the MraZ family
PG913_11225	COG2267	carboxylic ester hydrolase activity
PG913_11235	COG0564	pseudouridine synthase activity
PG913_11240	COG1012	belongs to the aldehyde dehydrogenase family
PG913_11255	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
PG913_11265	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
PG913_11270	COG0668	transmembrane transport
PG913_11300	COG1522	sequence-specific DNA binding
PG913_11305	COG1757	Na H antiporter
PG913_11315	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PG913_11330	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PG913_11335	COG0228	four-way junction DNA binding
PG913_11340	COG1278	Cold shock
PG913_11355	COG1131	(ABC) transporter
PG913_11360	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PG913_11370	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PG913_11375	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
PG913_11390	COG2086	electron transfer activity
PG913_11395	COG0022	dehydrogenase e1 component
PG913_11395	COG0508	dehydrogenase complex catalyzes the overall conversion of
PG913_11405	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
PG913_11420	COG2267	carboxylic ester hydrolase activity
PG913_11425	COG0037	tRNA processing
PG913_11430	COG0785	Cytochrome C biogenesis protein
PG913_11435	COG0606	chelatase, subunit chli
PG913_11440	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
PG913_11445	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
PG913_11450	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
PG913_11495	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
PG913_11495	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PG913_11510	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
PG913_11515	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
PG913_11545	COG3474	cytochrome
PG913_11555	COG1253	flavin adenine dinucleotide binding
PG913_11570	COG2151	metal-sulfur cluster biosynthetic enzyme
PG913_11575	COG2166	iron-sulfur cluster assembly
PG913_11610	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PG913_11615	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PG913_11635	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PG913_11640	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PG913_11645	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PG913_11650	COG1805	sodium ion transport
PG913_11655	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
PG913_11665	COG2967	ApaG domain
PG913_11690	COG1012	belongs to the aldehyde dehydrogenase family
PG913_11695	COG0612	Peptidase, M16
PG913_11700	COG2066	Belongs to the glutaminase family
PG913_11705	COG0513	Belongs to the DEAD box helicase family
PG913_11725	COG0357	Ribosomal RNA small subunit methyltransferase G
PG913_11730	COG3239	Fatty acid desaturase
PG913_11735	COG0436	Aminotransferase
PG913_11750	COG0084	hydrolase, TatD family'
PG913_11770	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
PG913_11775	COG0714	Associated with various cellular activities
PG913_11790	COG2304	oxidoreductase activity
PG913_11795	COG2304	oxidoreductase activity
PG913_11820	COG0659	secondary active sulfate transmembrane transporter activity
PG913_11825	COG0288	reversible hydration of carbon dioxide
PG913_11850	COG0792	nuclease activity
PG913_11855	COG1619	proteins homologs of microcin C7 resistance protein MccF
PG913_11860	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PG913_11860	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PG913_11870	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PG913_11875	COG0629	single-stranded DNA binding
PG913_11885	COG0469	pyruvate kinase activity
PG913_11895	COG0571	ribonuclease III activity
PG913_11900	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
PG913_11905	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
PG913_11910	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PG913_11930	COG0668	transmembrane transport
PG913_11935	COG1214	PFAM Peptidase M22, glycoprotease
PG913_11950	COG2322	membrane
PG913_11955	COG1999	signal sequence binding
PG913_11970	COG1845	cytochrome c oxidase, subunit III
PG913_11975	COG1845	cytochrome c oxidase, subunit III
PG913_11980	COG0109	protoheme IX farnesyltransferase activity
PG913_12030	COG1054	Belongs to the UPF0176 family
PG913_12045	COG2226	methyltransferase
PG913_12060	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PG913_12070	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
PG913_12080	COG0297	glycogen (starch) synthase activity
PG913_12090	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
PG913_12095	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
PG913_12100	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PG913_12150	COG0464	growth
PG913_12195	COG0584	glycerophosphoryl diester phosphodiesterase
PG913_12205	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PG913_12220	COG1999	signal sequence binding
PG913_12225	COG0750	zinc metalloprotease
PG913_12235	COG0460	homoserine dehydrogenase
PG913_12235	COG0527	aspartate kinase activity
PG913_12245	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
PG913_12285	COG3118	belongs to the thioredoxin family
PG913_12290	COG1408	metallophosphoesterase
PG913_12295	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PG913_12295	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PG913_12315	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
PG913_12330	COG0423	glycine-tRNA ligase activity
PG913_12350	COG0196	riboflavin kinase activity
PG913_12355	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PG913_12370	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
PG913_12375	COG2239	Acts as a magnesium transporter
PG913_12385	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
PG913_12400	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PG913_12410	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PG913_12415	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PG913_12425	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PG913_12430	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PG913_12435	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PG913_12440	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PG913_12445	COG0356	it plays a direct role in the translocation of protons across the membrane
PG913_12480	COG0791	NLP P60 protein
PG913_12480	COG1388	LysM domain
PG913_12485	COG0708	Exodeoxyribonuclease III
PG913_12495	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
PG913_12500	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
PG913_12505	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
PG913_12520	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PG913_12560	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
PG913_12580	COG0189	ligase activity
PG913_12590	COG0513	Belongs to the DEAD box helicase family
PG913_12595	COG0006	proline dipeptidase activity
PG913_12615	COG0598	Magnesium transport protein CorA
PG913_12630	COG1053	succinate dehydrogenase
PG913_12635	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
PG913_12650	COG3275	phosphorelay sensor kinase activity
PG913_12655	COG3279	Response regulator of the LytR AlgR family
PG913_12665	COG2095	MarC family integral membrane protein
PG913_12675	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PG913_12675	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PG913_12690	COG1505	serine-type exopeptidase activity
PG913_12715	COG4221	oxidoreductase activity
PG913_12740	COG1012	belongs to the aldehyde dehydrogenase family
PG913_12755	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
PG913_12780	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
PG913_12785	COG0756	dUTP diphosphatase activity
PG913_12790	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PG913_12810	COG2153	protein acetylation
PG913_12815	COG0698	ribose 5-phosphate isomerase