locus-tag	class	description
H0I31_00025	COG1959	2 iron, 2 sulfur cluster binding
H0I31_00045	COG2826	transposase and inactivated derivatives, IS30 family
H0I31_00085	COG0156	8-amino-7-oxononanoate synthase activity
H0I31_00100	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
H0I31_00110	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
H0I31_00120	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
H0I31_00125	COG0737	Belongs to the 5'-nucleotidase family
H0I31_00135	COG1702	phosphate starvation-inducible protein PhoH
H0I31_00170	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
H0I31_00200	COG1132	(ABC) transporter
H0I31_00220	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
H0I31_00235	COG4191	Histidine kinase
H0I31_00250	COG1858	cytochrome C peroxidase
H0I31_00260	COG0783	Belongs to the Dps family
H0I31_00270	COG0659	secondary active sulfate transmembrane transporter activity
H0I31_00275	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
H0I31_00280	COG0540	Belongs to the ATCase OTCase family
H0I31_00295	COG1234	tRNA 3'-trailer cleavage
H0I31_00305	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
H0I31_00310	COG0326	Molecular chaperone. Has ATPase activity
H0I31_00315	COG4628	conserved protein (DUF2132)
H0I31_00385	COG1090	epimerase
H0I31_00400	COG0508	dehydrogenase complex catalyzes the overall conversion of
H0I31_00410	COG0408	coproporphyrinogen oxidase activity
H0I31_00425	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
H0I31_00435	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
H0I31_00440	COG0113	porphobilinogen synthase activity
H0I31_00450	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
H0I31_00465	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
H0I31_00470	COG1981	membrane
H0I31_00475	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
H0I31_00480	COG2195	Cleaves the N-terminal amino acid of tripeptides
H0I31_00485	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
H0I31_00490	COG0405	Gamma-glutamyltransferase
H0I31_00505	COG0336	Belongs to the RNA methyltransferase TrmD family
H0I31_00510	COG0463	Glycosyl transferase, family 2
H0I31_00515	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
H0I31_00520	COG0335	large ribosomal subunit rRNA binding
H0I31_00530	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
H0I31_00575	COG1418	mRNA catabolic process
H0I31_00640	COG3177	Filamentation induced by cAMP protein fic
H0I31_00690	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
H0I31_00805	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
H0I31_00810	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
H0I31_00960	COG2732	(Barnase) inhibitor
H0I31_00980	COG3547	Transposase (IS116 IS110 IS902 family)
H0I31_01000	COG1902	pentaerythritol trinitrate reductase activity
H0I31_01005	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
H0I31_01010	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
H0I31_01025	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
H0I31_01040	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
H0I31_01045	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
H0I31_01050	COG1595	DNA-templated transcription, initiation
H0I31_01055	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
H0I31_01070	COG4771	TonB-dependent receptor
H0I31_01105	COG3275	phosphorelay sensor kinase activity
H0I31_01110	COG3279	Response regulator of the LytR AlgR family
H0I31_01115	COG1678	Uncharacterized ACR, COG1678
H0I31_01140	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
H0I31_01180	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
H0I31_01185	COG0626	cystathionine gamma-synthase activity
H0I31_01230	COG0183	Belongs to the thiolase family
H0I31_01235	COG0791	NLP P60 protein
H0I31_01250	COG0542	response to heat
H0I31_01255	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
H0I31_01260	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
H0I31_01320	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
H0I31_01330	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
H0I31_01340	COG0671	phosphoesterase, PA-phosphatase related
H0I31_01345	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
H0I31_01360	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
H0I31_01365	COG0105	UTP biosynthetic process
H0I31_01375	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
H0I31_01385	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
H0I31_01395	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
H0I31_01420	COG1529	Aldehyde oxidase and xanthine dehydrogenase
H0I31_01430	COG3608	succinylglutamate desuccinylase aspartoacylase
H0I31_01430	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
H0I31_01435	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
H0I31_01445	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
H0I31_01470	COG0259	pyridoxamine-phosphate oxidase activity
H0I31_01525	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
H0I31_01555	COG4166	transmembrane transport
H0I31_01565	COG2329	Antibiotic biosynthesis monooxygenase
H0I31_01575	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
H0I31_01600	COG4895	conserved protein (DUF2196)
H0I31_01605	COG1278	Cold shock
H0I31_01610	COG1278	Cold shock
H0I31_01615	COG1278	Cold shock
H0I31_01630	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
H0I31_01645	COG0302	gtp cyclohydrolase
H0I31_01650	COG0124	histidyl-tRNA synthetase
H0I31_01655	COG1295	ribonuclease BN
H0I31_01665	COG0339	signal peptide processing
H0I31_01675	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
H0I31_01690	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
H0I31_01695	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
H0I31_01700	COG1120	ATPase activity
H0I31_01705	COG2234	aminopeptidase activity
H0I31_01715	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
H0I31_01720	COG2022	thiamine diphosphate biosynthetic process
H0I31_01725	COG0352	thiamine-phosphate diphosphorylase activity
H0I31_01740	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
H0I31_01755	COG0010	Belongs to the arginase family
H0I31_01770	COG0148	phosphopyruvate hydratase activity
H0I31_01775	COG0505	Belongs to the CarA family
H0I31_01780	COG0203	ribosomal protein L17
H0I31_01785	COG0202	RNA polymerase activity
H0I31_01790	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
H0I31_01795	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
H0I31_01800	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
H0I31_01805	COG0257	Belongs to the bacterial ribosomal protein bL36 family
H0I31_01810	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
H0I31_01820	COG0200	Binds to the 23S rRNA
H0I31_01825	COG1841	ribosomal large subunit assembly
H0I31_01830	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
H0I31_01835	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
H0I31_01840	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
H0I31_01845	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
H0I31_01850	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
H0I31_01855	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
H0I31_01860	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
H0I31_01865	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
H0I31_01870	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
H0I31_01875	COG0255	Belongs to the universal ribosomal protein uL29 family
H0I31_01880	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
H0I31_01885	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
H0I31_01890	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
H0I31_01895	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
H0I31_01900	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
H0I31_01905	COG0089	rRNA binding
H0I31_01910	COG0088	Forms part of the polypeptide exit tunnel
H0I31_01915	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
H0I31_01920	COG0051	transcription antitermination factor activity, RNA binding
H0I31_01925	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
H0I31_01930	COG0049	tRNA binding
H0I31_01935	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
H0I31_01940	COG1629	transport
H0I31_01940	COG4206	TonB-dependent receptor
H0I31_01950	COG1629	transport
H0I31_01965	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
H0I31_01975	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
H0I31_01985	COG1011	Hydrolase
H0I31_01995	COG2003	Belongs to the UPF0758 family
H0I31_02000	COG0569	domain protein
H0I31_02005	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
H0I31_02040	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
H0I31_02045	COG1629	transport
H0I31_02060	COG1404	Belongs to the peptidase S8 family
H0I31_02080	COG3530	Putative quorum-sensing-regulated virulence factor
H0I31_02155	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
H0I31_02180	COG1459	type II secretion system
H0I31_02220	COG1166	arginine decarboxylase activity
H0I31_02225	COG0010	Belongs to the arginase family
H0I31_02230	COG3153	acetyltransferase
H0I31_02230	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
H0I31_02235	COG1899	peptidyl-lysine modification to peptidyl-hypusine
H0I31_02245	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
H0I31_02250	COG1129	ABC transporter
H0I31_02280	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
H0I31_02310	COG0174	glutamine synthetase
H0I31_02340	COG2885	chlorophyll binding
H0I31_02365	COG2264	protein methyltransferase activity
H0I31_02370	COG0149	triose-phosphate isomerase activity
H0I31_02380	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
H0I31_02390	COG0601	transmembrane transport
H0I31_02395	COG0284	orotidine-5'-phosphate decarboxylase activity
H0I31_02400	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
H0I31_02425	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
H0I31_02430	COG2986	histidine ammonia-lyase
H0I31_02435	COG0583	DNA-binding transcription factor activity
H0I31_02445	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
H0I31_02445	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
H0I31_02445	COG1703	isobutyryl-CoA mutase activity
H0I31_02485	COG0514	ATP-dependent DNA helicase (RecQ)
H0I31_02490	COG4946	Tricorn protease homolog
H0I31_02490	COG0793	Belongs to the peptidase S41A family
H0I31_02495	COG1629	transport
H0I31_02500	COG1047	Peptidyl-prolyl cis-trans
H0I31_02505	COG0159	tryptophan synthase activity
H0I31_02510	COG0133	tryptophan synthase activity
H0I31_02515	COG0135	phosphoribosylanthranilate isomerase activity
H0I31_02520	COG0134	indole-3-glycerol-phosphate synthase activity
H0I31_02525	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
H0I31_02530	COG0512	Glutamine amidotransferase of anthranilate synthase
H0I31_02535	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
H0I31_02545	COG0367	asparagine synthase
H0I31_02550	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
H0I31_02560	COG0187	DNA topoisomerase II activity
H0I31_02575	COG0039	L-malate dehydrogenase activity
H0I31_02580	COG2884	Cell division ATP-binding protein ftsE
H0I31_02605	COG1574	metal-dependent hydrolase with the TIM-barrel fold
H0I31_02610	COG0545	Peptidyl-prolyl cis-trans isomerase
H0I31_02615	COG1595	DNA-templated transcription, initiation
H0I31_02625	COG1032	radical SAM domain protein
H0I31_02640	COG2072	flavoprotein involved in K transport
H0I31_02650	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
H0I31_02655	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
H0I31_02695	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
H0I31_02705	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
H0I31_02710	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
H0I31_02715	COG0339	signal peptide processing
H0I31_02725	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
H0I31_02735	COG1253	flavin adenine dinucleotide binding
H0I31_02760	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
H0I31_02785	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
H0I31_02790	COG3279	Response regulator of the LytR AlgR family
H0I31_02795	COG3275	phosphorelay sensor kinase activity
H0I31_02805	COG3942	CHAP domain
H0I31_02805	COG1705	Flagellar rod assembly protein muramidase FlgJ
H0I31_02815	COG0488	(ABC) transporter
H0I31_02845	COG1262	PFAM Formylglycine-generating sulfatase enzyme
H0I31_02860	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
H0I31_02865	COG3604	Transcriptional regulator
H0I31_02885	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
H0I31_02890	COG0459	protein refolding
H0I31_02910	COG0820	rRNA (adenine-C2-)-methyltransferase activity
H0I31_02915	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
H0I31_02940	COG2814	Major facilitator Superfamily
H0I31_02950	COG0635	Involved in the biosynthesis of porphyrin-containing compound
H0I31_02955	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
H0I31_02960	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
H0I31_02965	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
H0I31_02970	COG2363	Small membrane protein
H0I31_02985	COG0596	Alpha beta hydrolase
H0I31_02990	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
H0I31_02995	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
H0I31_02995	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
H0I31_03005	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
H0I31_03035	COG0519	Catalyzes the synthesis of GMP from XMP
H0I31_03045	COG0616	signal peptide processing
H0I31_03050	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
H0I31_03075	COG0612	Peptidase, M16
H0I31_03085	COG0436	Aminotransferase
H0I31_03095	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
H0I31_03100	COG1162	GTPase activity
H0I31_03105	COG1490	D-aminoacyl-tRNA deacylase activity
H0I31_03115	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
H0I31_03125	COG0321	lipoyl(octanoyl) transferase activity
H0I31_03165	COG1428	Deoxynucleoside kinase
H0I31_03170	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
H0I31_03180	COG0191	fructose-bisphosphate aldolase activity
H0I31_03185	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
H0I31_03190	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
H0I31_03195	COG1185	polyribonucleotide nucleotidyltransferase activity
H0I31_03200	COG1428	Deoxynucleoside kinase
H0I31_03215	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
H0I31_03220	COG0358	DNA primase activity
H0I31_03230	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
H0I31_03240	COG0544	peptidyl-prolyl cis-trans isomerase activity
H0I31_03245	COG1950	PFAM Membrane protein of
H0I31_03255	COG0101	tRNA pseudouridine synthase activity
H0I31_03260	COG2267	carboxylic ester hydrolase activity
H0I31_03265	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
H0I31_03275	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
H0I31_03285	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
H0I31_03305	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
H0I31_03350	COG0415	Belongs to the DNA photolyase family
H0I31_03360	COG3046	protein related to deoxyribodipyrimidine photolyase
H0I31_03370	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
H0I31_03380	COG1160	GTP binding
H0I31_03400	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
H0I31_03415	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
H0I31_03425	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
H0I31_03445	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
H0I31_03460	COG2363	Small membrane protein
H0I31_03480	COG1704	LemA family
H0I31_03495	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
H0I31_03505	COG2314	TM2 domain
H0I31_03510	COG0415	Belongs to the DNA photolyase family
H0I31_03520	COG0386	Belongs to the glutathione peroxidase family
H0I31_03530	COG0300	oxidoreductase activity
H0I31_03535	COG0702	epimerase
H0I31_03545	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
H0I31_03555	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
H0I31_03595	COG3186	Phenylalanine-4-hydroxylase
H0I31_03600	COG0501	Belongs to the peptidase M48B family
H0I31_03615	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
H0I31_03635	COG2226	methyltransferase
H0I31_03640	COG1477	protein flavinylation
H0I31_03650	COG1368	sulfuric ester hydrolase activity
H0I31_03655	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
H0I31_03660	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
H0I31_03665	COG0052	Belongs to the universal ribosomal protein uS2 family
H0I31_03670	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
H0I31_03675	COG0528	UMP kinase activity
H0I31_03680	COG0233	cytoplasmic translational termination
H0I31_03690	COG0017	Asparaginyl-tRNA synthetase
H0I31_03725	COG0811	peptide transport
H0I31_03730	COG0252	asparaginase activity
H0I31_03740	COG0481	GTPase activity
H0I31_03745	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
H0I31_03750	COG4591	ABC-type transport system involved in lipoprotein release permease component
H0I31_03755	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
H0I31_03765	COG4585	Histidine kinase
H0I31_03780	COG0346	lactoylglutathione lyase activity
H0I31_03785	COG2177	Part of the ABC transporter FtsEX involved in
H0I31_03795	COG1968	undecaprenyl-diphosphatase activity
H0I31_03800	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
H0I31_03815	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
H0I31_03825	COG2137	regulation of response to DNA damage stimulus
H0I31_03835	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
H0I31_03845	COG1309	transcriptional regulator
H0I31_03865	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
H0I31_03875	COG0333	Belongs to the bacterial ribosomal protein bL32 family
H0I31_03880	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
H0I31_03885	COG0511	ligase activity, forming carbon-carbon bonds
H0I31_03890	COG0439	Biotin carboxylase
H0I31_03915	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
H0I31_03930	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
H0I31_03935	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
H0I31_03950	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
H0I31_03955	COG3655	Transcriptional regulator
H0I31_03975	COG1522	sequence-specific DNA binding
H0I31_03990	COG0793	Belongs to the peptidase S41A family
H0I31_03990	COG3409	Peptidoglycan-binding domain 1 protein
H0I31_03995	COG2258	MOSC domain
H0I31_04005	COG5002	protein histidine kinase activity
H0I31_04020	COG0739	heme binding
H0I31_04025	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
H0I31_04030	COG0194	GDP metabolic process
H0I31_04035	COG1561	YicC-like family, N-terminal region
H0I31_04045	COG1652	LysM domain
H0I31_04050	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
H0I31_04070	COG1858	cytochrome C peroxidase
H0I31_04080	COG0719	Fe-S assembly protein
H0I31_04090	COG0396	ATPase activity
H0I31_04095	COG0719	Fe-S assembly protein
H0I31_04105	COG0508	dehydrogenase complex catalyzes the overall conversion of
H0I31_04155	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
H0I31_04165	COG0156	8-amino-7-oxononanoate synthase activity
H0I31_04175	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
H0I31_04185	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
H0I31_04205	COG2268	Band 7 protein
H0I31_04210	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
H0I31_04230	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
H0I31_04235	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
H0I31_04250	COG1595	DNA-templated transcription, initiation
H0I31_04260	COG4122	O-methyltransferase activity
H0I31_04265	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
H0I31_04270	COG0355	proton-transporting ATP synthase activity, rotational mechanism
H0I31_04275	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
H0I31_04285	COG0156	8-amino-7-oxononanoate synthase activity
H0I31_04290	COG1074	ATP-dependent DNA helicase activity
H0I31_04295	COG1108	ABC-type Mn2 Zn2 transport systems permease components
H0I31_04300	COG1108	ABC-type Mn2 Zn2 transport systems permease components
H0I31_04310	COG1121	(ABC) transporter
H0I31_04315	COG0803	Belongs to the bacterial solute-binding protein 9 family
H0I31_04325	COG4771	TonB-dependent receptor
H0I31_04345	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
H0I31_04350	COG2251	uridine kinase activity
H0I31_04350	COG0195	Participates in both transcription termination and antitermination
H0I31_04355	COG0779	Required for maturation of 30S ribosomal subunits
H0I31_04370	COG1435	thymidine kinase activity
H0I31_04375	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
H0I31_04380	COG1970	mechanosensitive ion channel activity
H0I31_04395	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
H0I31_04395	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
H0I31_04435	COG1946	Acyl-CoA thioesterase
H0I31_04450	COG0495	leucyl-tRNA aminoacylation
H0I31_04470	COG4771	TonB-dependent receptor
H0I31_04485	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
H0I31_04500	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
H0I31_04505	COG0463	Glycosyl transferase, family 2
H0I31_04520	COG0306	phosphate transporter
H0I31_04535	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
H0I31_04545	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
H0I31_04565	COG1215	transferase activity, transferring glycosyl groups
H0I31_04595	COG0509	glycine decarboxylation via glycine cleavage system
H0I31_04605	COG0632	four-way junction helicase activity
H0I31_04610	COG0280	phosphate acetyltransferase
H0I31_04610	COG0281	malic enzyme
H0I31_04615	COG0840	transmembrane signaling receptor activity
H0I31_04670	COG4206	TonB-dependent receptor
H0I31_04675	COG1381	Involved in DNA repair and RecF pathway recombination
H0I31_04680	COG2954	triphosphatase activity
H0I31_04685	COG1272	protein, Hemolysin III
H0I31_04705	COG0667	Aldo Keto reductase
H0I31_04710	COG0126	phosphoglycerate kinase activity
H0I31_04715	COG0314	molybdopterin synthase activity
H0I31_04725	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
H0I31_04750	COG1629	transport
H0I31_04750	COG4206	TonB-dependent receptor
H0I31_04755	COG0166	Belongs to the GPI family
H0I31_04770	COG3483	tryptophan 2,3-dioxygenase activity
H0I31_04775	COG3185	4-Hydroxyphenylpyruvate dioxygenase
H0I31_04785	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
H0I31_04800	COG0492	ferredoxin-NADP+ reductase activity
H0I31_04810	COG0489	protein tyrosine kinase activity
H0I31_04820	COG0220	tRNA (guanine-N7-)-methyltransferase activity
H0I31_04835	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
H0I31_04840	COG2267	carboxylic ester hydrolase activity
H0I31_04850	COG1114	Component of the transport system for branched-chain amino acids
H0I31_04870	COG0470	DNA polymerase III
H0I31_04880	COG5000	phosphorelay sensor kinase activity
H0I31_04885	COG1024	Enoyl-CoA hydratase
H0I31_04900	COG1418	mRNA catabolic process
H0I31_04905	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
H0I31_04915	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
H0I31_04925	COG3279	Response regulator of the LytR AlgR family
H0I31_04930	COG0211	Belongs to the bacterial ribosomal protein bL27 family
H0I31_04935	COG0261	This protein binds to 23S rRNA in the presence of protein L20
H0I31_04940	COG0612	Peptidase, M16
H0I31_04945	COG0612	Peptidase, M16
H0I31_04975	COG0629	single-stranded DNA binding
H0I31_04980	COG1194	a g-specific adenine glycosylase
H0I31_04985	COG0776	regulation of translation
H0I31_04990	COG1530	ribonuclease E activity
H0I31_05000	COG0322	excinuclease ABC activity
H0I31_05005	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
H0I31_05010	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
H0I31_05020	COG0303	'Molybdopterin
H0I31_05025	COG2827	Endonuclease containing a URI domain
H0I31_05030	COG0315	cyclic pyranopterin monophosphate synthase activity
H0I31_05030	COG0746	molybdenum cofactor guanylyltransferase activity
H0I31_05035	COG0746	molybdenum cofactor guanylyltransferase activity
H0I31_05035	COG0315	cyclic pyranopterin monophosphate synthase activity
H0I31_05045	COG4067	protein conserved in archaea
H0I31_05045	COG0189	ligase activity
H0I31_05085	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
H0I31_05090	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
H0I31_05095	COG0193	aminoacyl-tRNA hydrolase activity
H0I31_05100	COG0720	synthase
H0I31_05125	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
H0I31_05140	COG4585	Histidine kinase
H0I31_05150	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
H0I31_05170	COG0594	ribonuclease P activity
H0I31_05175	COG0793	Belongs to the peptidase S41A family
H0I31_05185	COG0151	Belongs to the GarS family
H0I31_05190	COG5002	protein histidine kinase activity
H0I31_05195	COG0745	RESPONSE REGULATOR receiver
H0I31_05205	COG0488	(ABC) transporter
H0I31_05215	COG5297	Belongs to the glycosyl hydrolase family 6
H0I31_05215	COG4733	cellulase activity
H0I31_05230	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
H0I31_05250	COG0628	permease
H0I31_05255	COG1607	acyl-coa hydrolase
H0I31_05265	COG0758	DNA mediated transformation
H0I31_05265	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
H0I31_05280	COG0697	spore germination
H0I31_05285	COG1988	membrane-bound metal-dependent
H0I31_05290	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
H0I31_05295	COG0419	ATPase involved in DNA repair
H0I31_05300	COG0420	3'-5' exonuclease activity
H0I31_05315	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
H0I31_05330	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
H0I31_05335	COG0445	tRNA wobble uridine modification
H0I31_05360	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
H0I31_05370	COG0557	exoribonuclease II activity
H0I31_05375	COG1597	lipid kinase activity
H0I31_05385	COG0698	ribose 5-phosphate isomerase
H0I31_05390	COG2153	protein acetylation
H0I31_05395	COG1187	pseudouridine synthase activity
H0I31_05405	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
H0I31_05415	COG1228	amidohydrolase
H0I31_05425	COG0756	dUTP diphosphatase activity
H0I31_05430	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
H0I31_05460	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
H0I31_05475	COG1012	belongs to the aldehyde dehydrogenase family
H0I31_05485	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
H0I31_05510	COG4221	oxidoreductase activity
H0I31_05545	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
H0I31_05550	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
H0I31_05555	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
H0I31_05570	COG3842	ATPase activity
H0I31_05585	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
H0I31_05615	COG0584	glycerophosphoryl diester phosphodiesterase
H0I31_05620	COG3590	peptidase
H0I31_05625	COG1505	serine-type exopeptidase activity
H0I31_05640	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
H0I31_05640	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
H0I31_05655	COG0232	Belongs to the dGTPase family. Type 2 subfamily
H0I31_05675	COG2095	MarC family integral membrane protein
H0I31_05685	COG2356	endonuclease I
H0I31_05690	COG3279	Response regulator of the LytR AlgR family
H0I31_05695	COG3275	phosphorelay sensor kinase activity
H0I31_05710	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
H0I31_05715	COG1053	succinate dehydrogenase
H0I31_05725	COG1051	belongs to the nudix hydrolase family
H0I31_05730	COG0598	Magnesium transport protein CorA
H0I31_05760	COG0006	proline dipeptidase activity
H0I31_05770	COG0513	Belongs to the DEAD box helicase family
H0I31_05805	COG0189	ligase activity
H0I31_05830	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
H0I31_05850	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
H0I31_05855	COG1774	PSP1 C-terminal conserved region
H0I31_05865	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
H0I31_05870	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
H0I31_05875	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
H0I31_05890	COG0708	Exodeoxyribonuclease III
H0I31_05895	COG1388	LysM domain
H0I31_05895	COG4932	domain protein
H0I31_05940	COG0356	it plays a direct role in the translocation of protons across the membrane
H0I31_05945	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
H0I31_05950	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
H0I31_05955	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
H0I31_05960	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
H0I31_05965	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
H0I31_05975	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
H0I31_05980	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
H0I31_06030	COG2239	Acts as a magnesium transporter
H0I31_06035	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
H0I31_06055	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
H0I31_06060	COG0196	riboflavin kinase activity
H0I31_06065	COG1629	transport
H0I31_06075	COG0423	glycine-tRNA ligase activity
H0I31_06095	COG1040	competence protein
H0I31_06115	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
H0I31_06115	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
H0I31_06120	COG1408	metallophosphoesterase
H0I31_06155	COG0626	cystathionine gamma-synthase activity
H0I31_06165	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
H0I31_06175	COG0460	homoserine dehydrogenase
H0I31_06175	COG0527	aspartate kinase activity
H0I31_06190	COG1999	signal sequence binding
H0I31_06205	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
H0I31_06220	COG1115	amino acid carrier protein
H0I31_06230	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
H0I31_06235	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
H0I31_06245	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
H0I31_06255	COG0297	glycogen (starch) synthase activity
H0I31_06260	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
H0I31_06265	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
H0I31_06275	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
H0I31_06285	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
H0I31_06295	COG2226	methyltransferase
H0I31_06310	COG1054	Belongs to the UPF0176 family
H0I31_06345	COG0109	protoheme IX farnesyltransferase activity
H0I31_06350	COG1845	cytochrome c oxidase, subunit III
H0I31_06370	COG1999	signal sequence binding
H0I31_06375	COG2322	membrane
H0I31_06390	COG1214	PFAM Peptidase M22, glycoprotease
H0I31_06395	COG0668	transmembrane transport
H0I31_06400	COG3759	membrane
H0I31_06410	COG0328	RNA-DNA hybrid ribonuclease activity
H0I31_06410	COG3341	Caulimovirus viroplasmin
H0I31_06415	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
H0I31_06420	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
H0I31_06425	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
H0I31_06430	COG0571	ribonuclease III activity
H0I31_06440	COG0469	pyruvate kinase activity
H0I31_06450	COG0516	GMP reductase activity
H0I31_06450	COG0517	IMP dehydrogenase activity
H0I31_06465	COG0629	single-stranded DNA binding
H0I31_06485	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
H0I31_06485	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
H0I31_06490	COG1619	proteins homologs of microcin C7 resistance protein MccF
H0I31_06495	COG0792	nuclease activity
H0I31_06505	COG1028	Short-chain dehydrogenase reductase Sdr
H0I31_06535	COG0288	reversible hydration of carbon dioxide
H0I31_06540	COG0659	secondary active sulfate transmembrane transporter activity
H0I31_06565	COG2304	oxidoreductase activity
H0I31_06570	COG2304	oxidoreductase activity
H0I31_06585	COG0714	Associated with various cellular activities
H0I31_06605	COG0084	hydrolase, TatD family'
H0I31_06620	COG0436	Aminotransferase
H0I31_06625	COG3239	Fatty acid desaturase
H0I31_06630	COG0357	Ribosomal RNA small subunit methyltransferase G
H0I31_06650	COG0513	Belongs to the DEAD box helicase family
H0I31_06665	COG0494	nUDIX hydrolase
H0I31_06670	COG2066	Belongs to the glutaminase family
H0I31_06680	COG1012	belongs to the aldehyde dehydrogenase family
H0I31_06695	COG2967	ApaG domain
H0I31_06705	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
H0I31_06710	COG1805	sodium ion transport
H0I31_06715	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
H0I31_06720	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
H0I31_06725	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
H0I31_06735	COG0513	Belongs to the DEAD box helicase family
H0I31_06745	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
H0I31_06750	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
H0I31_06765	COG1253	flavin adenine dinucleotide binding
H0I31_06785	COG2151	metal-sulfur cluster biosynthetic enzyme
H0I31_06790	COG2166	iron-sulfur cluster assembly
H0I31_06800	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
H0I31_06810	COG3474	cytochrome
H0I31_06815	COG0437	4 iron, 4 sulfur cluster binding
H0I31_06845	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
H0I31_06850	COG2255	four-way junction helicase activity
H0I31_06865	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
H0I31_06865	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
H0I31_06890	COG1045	serine acetyltransferase
H0I31_06925	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
H0I31_06930	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
H0I31_06935	COG0606	chelatase, subunit chli
H0I31_06940	COG0785	Cytochrome C biogenesis protein
H0I31_06945	COG0037	tRNA processing
H0I31_06950	COG2267	carboxylic ester hydrolase activity
H0I31_06965	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
H0I31_06970	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
H0I31_06975	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
H0I31_06985	COG0508	dehydrogenase complex catalyzes the overall conversion of
H0I31_06985	COG0022	dehydrogenase e1 component
H0I31_06990	COG2086	electron transfer activity
H0I31_06995	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
H0I31_07005	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
H0I31_07010	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
H0I31_07020	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
H0I31_07045	COG1278	Cold shock
H0I31_07050	COG0228	four-way junction DNA binding
H0I31_07055	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
H0I31_07060	COG2824	Alkylphosphonate utilization operon protein PhnA
H0I31_07070	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
H0I31_07090	COG1757	Na H antiporter
H0I31_07100	COG2095	MarC family integral membrane protein
H0I31_07160	COG0668	transmembrane transport
H0I31_07170	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
H0I31_07200	COG1012	belongs to the aldehyde dehydrogenase family
H0I31_07210	COG0564	pseudouridine synthase activity
H0I31_07215	COG0218	Necessary for normal cell division and for the maintenance of normal septation
H0I31_07225	COG2001	Belongs to the MraZ family
H0I31_07230	COG0275	rRNA processing
H0I31_07240	COG0768	penicillin binding
H0I31_07245	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
H0I31_07250	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
H0I31_07255	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
H0I31_07260	COG0772	Belongs to the SEDS family
H0I31_07265	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
H0I31_07270	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
H0I31_07275	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
H0I31_07285	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
H0I31_07290	COG1610	YqeY-like protein
H0I31_07305	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
H0I31_07310	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
H0I31_07315	COG1595	DNA-templated transcription, initiation
H0I31_07340	COG2226	methyltransferase
H0I31_07345	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
H0I31_07360	COG0442	prolyl-tRNA aminoacylation
H0I31_07375	COG0268	Binds directly to 16S ribosomal RNA
H0I31_07380	COG0772	Belongs to the SEDS family
H0I31_07385	COG0768	penicillin binding
H0I31_07400	COG1077	Cell shape determining protein MreB Mrl
H0I31_07405	COG0138	bifunctional purine biosynthesis protein purh
H0I31_07430	COG1187	pseudouridine synthase activity
H0I31_07455	COG3279	Response regulator of the LytR AlgR family
H0I31_07495	COG2081	HI0933 family
H0I31_07510	COG1506	peptidase
H0I31_07510	COG0823	Involved in the tonB-independent uptake of proteins
H0I31_07525	COG4232	protein-disulfide reductase activity
H0I31_07530	COG2333	competence protein COMEC
H0I31_07530	COG0658	competence protein
H0I31_07545	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
H0I31_07595	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
H0I31_07605	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
H0I31_07610	COG0791	NLP P60 protein
H0I31_07620	COG0791	NLP P60 protein
H0I31_07630	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
H0I31_07635	COG0563	adenylate kinase activity
H0I31_07640	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
H0I31_07645	COG2759	Belongs to the formate--tetrahydrofolate ligase family
H0I31_07660	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
H0I31_07665	COG0291	Belongs to the bacterial ribosomal protein bL35 family
H0I31_07670	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
H0I31_07675	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
H0I31_07710	COG1960	acyl-CoA dehydrogenase activity
H0I31_07715	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
H0I31_07730	COG0811	peptide transport
H0I31_07735	COG0848	biopolymer transport protein
H0I31_07770	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
H0I31_07780	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
H0I31_07830	COG1215	transferase activity, transferring glycosyl groups
H0I31_07835	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
H0I31_07845	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
H0I31_07865	COG0519	Catalyzes the synthesis of GMP from XMP
H0I31_07865	COG0518	GMP synthase (glutamine-hydrolyzing) activity
H0I31_07870	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
H0I31_07875	COG0295	cytidine deaminase activity
H0I31_07885	COG1262	PFAM Formylglycine-generating sulfatase enzyme
H0I31_07890	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
H0I31_07905	COG1333	cytochrome c biogenesis protein
H0I31_07905	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
H0I31_07910	COG0688	phosphatidylethanolamine metabolic process
H0I31_07915	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
H0I31_07915	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
H0I31_07920	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
H0I31_07955	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
H0I31_07970	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
H0I31_07975	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
H0I31_07985	COG1132	(ABC) transporter
H0I31_07990	COG0101	tRNA pseudouridine synthase activity
H0I31_08000	COG4585	Histidine kinase
H0I31_08010	COG2197	response regulator
H0I31_08025	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
H0I31_08105	COG2217	Heavy metal translocating P-type atpase
H0I31_08120	COG0347	Belongs to the P(II) protein family
H0I31_08145	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
H0I31_08165	COG2217	Heavy metal translocating P-type atpase
H0I31_08210	COG2132	Multicopper oxidase
H0I31_08225	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
H0I31_08235	COG4974	Belongs to the 'phage' integrase family
H0I31_08245	COG0492	ferredoxin-NADP+ reductase activity
H0I31_08260	COG4106	trans-aconitate 2-methyltransferase activity
H0I31_08270	COG1960	acyl-CoA dehydrogenase activity
H0I31_08275	COG0183	Belongs to the thiolase family
H0I31_08280	COG1024	Enoyl-CoA hydratase
H0I31_08280	COG1250	3-hydroxyacyl-CoA dehydrogenase
H0I31_08290	COG4152	abc transporter atp-binding protein
H0I31_08295	COG1668	transmembrane transport
H0I31_08300	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
H0I31_08300	COG3264	Mechanosensitive ion channel
H0I31_08335	COG0450	alkyl hydroperoxide reductase
H0I31_08355	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
H0I31_08360	COG0778	Nitroreductase
H0I31_08385	COG1611	Belongs to the LOG family
H0I31_08390	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
H0I31_08410	COG1115	amino acid carrier protein
H0I31_08420	COG1960	acyl-CoA dehydrogenase activity
H0I31_08425	COG0828	Belongs to the bacterial ribosomal protein bS21 family
H0I31_08460	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
H0I31_08480	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
H0I31_08485	COG0081	regulation of translation
H0I31_08490	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
H0I31_08495	COG0222	ribosome binding
H0I31_08500	COG0085	RNA polymerase activity
H0I31_08505	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
H0I31_08530	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
H0I31_08535	COG0635	Involved in the biosynthesis of porphyrin-containing compound
H0I31_08560	COG0348	domain, Protein
H0I31_08575	COG0589	response to stress
H0I31_08610	COG1073	alpha beta
H0I31_08635	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
H0I31_08645	COG2072	flavoprotein involved in K transport
H0I31_08665	COG0247	lactate metabolic process
H0I31_08665	COG0277	FAD linked oxidase domain protein
H0I31_08680	COG5383	Protein conserved in bacteria
H0I31_08690	COG0300	oxidoreductase activity
H0I31_08695	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
H0I31_08700	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
H0I31_08705	COG2996	Protein conserved in bacteria
H0I31_08720	COG0179	Fumarylacetoacetate (FAA) hydrolase
H0I31_08725	COG1546	Belongs to the CinA family
H0I31_08725	COG1058	Belongs to the CinA family
H0I31_08730	COG0227	Belongs to the bacterial ribosomal protein bL28 family
H0I31_08735	COG0267	Belongs to the bacterial ribosomal protein bL33 family
H0I31_08745	COG0552	protein localization to endoplasmic reticulum
H0I31_08755	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
H0I31_08780	COG3279	Response regulator of the LytR AlgR family
H0I31_08785	COG3275	phosphorelay sensor kinase activity
H0I31_08800	COG1136	(ABC) transporter
H0I31_08810	COG0045	succinate-CoA ligase (ADP-forming) activity
H0I31_08830	COG0556	nucleotide-excision repair
H0I31_08865	COG1131	(ABC) transporter
H0I31_08880	COG0237	dephospho-CoA kinase activity
H0I31_08890	COG1862	Preprotein translocase
H0I31_08900	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
H0I31_08910	COG1132	(ABC) transporter
H0I31_08920	COG1169	isochorismate synthase
H0I31_08930	COG2050	protein possibly involved in aromatic compounds catabolism
H0I31_08940	COG0009	L-threonylcarbamoyladenylate synthase
H0I31_08975	COG2095	MarC family integral membrane protein
H0I31_09025	COG0628	permease
H0I31_09040	COG2076	Multidrug Resistance protein
H0I31_09050	COG1846	Transcriptional regulator
H0I31_09085	COG0488	(ABC) transporter
H0I31_09090	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
H0I31_09110	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
H0I31_09120	COG0189	ligase activity
H0I31_09135	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
H0I31_09140	COG1663	tetraacyldisaccharide 4'-kinase activity
H0I31_09150	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
H0I31_09150	COG0662	Cupin 2, conserved barrel domain protein
H0I31_09165	COG0402	S-adenosylhomocysteine deaminase activity
H0I31_09180	COG0254	rRNA binding
H0I31_09185	COG0069	glutamate synthase activity
H0I31_09190	COG2813	Specifically methylates the guanine in position
H0I31_09200	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
H0I31_09200	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
H0I31_09210	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
H0I31_09215	COG3844	kynureninase activity
H0I31_09220	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
H0I31_09225	COG2827	Endonuclease containing a URI domain
H0I31_09255	COG1028	Short-chain dehydrogenase reductase Sdr
H0I31_09285	COG2274	protein secretion by the type I secretion system
H0I31_09295	COG3104	oligopeptide transport
H0I31_09315	COG4589	Belongs to the CDS family
H0I31_09325	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
H0I31_09330	COG0799	negative regulation of ribosome biogenesis
H0I31_09345	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
H0I31_09355	COG0443	Heat shock 70 kDa protein
H0I31_09360	COG3275	phosphorelay sensor kinase activity
H0I31_09365	COG3279	Response regulator of the LytR AlgR family
H0I31_09380	COG1252	NADH dehydrogenase
H0I31_09405	COG0655	NAD(P)H dehydrogenase (quinone) activity
H0I31_09410	COG2326	polyphosphate kinase activity
H0I31_09425	COG1472	Belongs to the glycosyl hydrolase 3 family
H0I31_09450	COG1385	rRNA (uridine-N3-)-methyltransferase activity
H0I31_09515	COG0681	Belongs to the peptidase S26 family
H0I31_09520	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
H0I31_09530	COG1475	DNA binding
H0I31_09535	COG1192	Involved in chromosome partitioning
H0I31_09540	COG0592	DNA-directed DNA polymerase activity
H0I31_09570	COG1104	cysteine desulfurase activity
H0I31_09600	COG3547	Transposase (IS116 IS110 IS902 family)
H0I31_09620	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
H0I31_09630	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
H0I31_09635	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
H0I31_09645	COG1482	cell wall glycoprotein biosynthetic process
H0I31_09685	COG1595	DNA-templated transcription, initiation
H0I31_09695	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
H0I31_09695	COG0321	lipoyl(octanoyl) transferase activity
H0I31_09700	COG3022	response to hydroperoxide
H0I31_09705	COG2949	membrane
H0I31_09710	COG1760	l-serine dehydratase
H0I31_09730	COG0205	6-phosphofructokinase activity
H0I31_09750	COG0251	oxidation-reduction process
H0I31_09760	COG0860	N-Acetylmuramoyl-L-alanine amidase
H0I31_09770	COG2181	nitrate reductase activity
H0I31_09770	COG0247	lactate metabolic process
H0I31_09775	COG2181	nitrate reductase activity
H0I31_09775	COG0247	lactate metabolic process
H0I31_09780	COG1575	Belongs to the MenA family. Type 1 subfamily
H0I31_09790	COG4948	Mandelate Racemase Muconate Lactonizing
H0I31_09795	COG1266	CAAX protease self-immunity
H0I31_09805	COG0217	transcriptional regulatory protein
H0I31_09815	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
H0I31_09825	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
H0I31_09870	COG1741	Belongs to the pirin family
H0I31_09875	COG1902	pentaerythritol trinitrate reductase activity
H0I31_09875	COG0446	pyridine nucleotide-disulphide oxidoreductase
H0I31_09880	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
H0I31_09890	COG0488	(ABC) transporter
H0I31_09905	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
H0I31_09910	COG0018	arginyl-trna synthetase
H0I31_09940	COG0482	sulfurtransferase activity
H0I31_09955	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
H0I31_09955	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
H0I31_09970	COG1674	ftsk spoiiie
H0I31_09980	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
H0I31_09985	COG0534	Mate efflux family protein
H0I31_10015	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
H0I31_10020	COG0653	protein targeting
H0I31_10040	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
H0I31_10045	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
H0I31_10050	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
H0I31_10080	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
H0I31_10090	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
H0I31_10095	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
H0I31_10115	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
H0I31_10150	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
H0I31_10155	COG1528	Iron-storage protein
H0I31_10180	COG0497	DNA recombination
H0I31_10190	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
H0I31_10205	COG1393	Belongs to the ArsC family
H0I31_10210	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
H0I31_10240	COG3275	phosphorelay sensor kinase activity
H0I31_10265	COG3279	Response regulator of the LytR AlgR family
H0I31_10270	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
H0I31_10280	COG1228	amidohydrolase
H0I31_10290	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
H0I31_10290	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
H0I31_10300	COG1595	DNA-templated transcription, initiation
H0I31_10315	COG0215	cysteine-tRNA ligase activity
H0I31_10320	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
H0I31_10325	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
H0I31_10335	COG0590	tRNA wobble adenosine to inosine editing
H0I31_10360	COG1446	asparaginase
H0I31_10365	COG0706	membrane insertase activity
H0I31_10370	COG0504	CTP synthase activity
H0I31_10375	COG0230	Belongs to the bacterial ribosomal protein bL34 family
H0I31_10380	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
H0I31_10410	COG1607	acyl-coa hydrolase
H0I31_10435	COG1595	DNA-templated transcription, initiation
H0I31_10445	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
H0I31_10450	COG1181	Belongs to the D-alanine--D-alanine ligase family
H0I31_10460	COG0564	pseudouridine synthase activity
H0I31_10470	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
H0I31_10495	COG1187	pseudouridine synthase activity
H0I31_10500	COG0343	queuine tRNA-ribosyltransferase activity
H0I31_10515	COG0825	malonyl-CoA metabolic process
H0I31_10525	COG0602	queuosine metabolic process
H0I31_10530	COG0433	COG0433 Predicted ATPase
H0I31_10540	COG0662	Cupin 2, conserved barrel domain protein
H0I31_10540	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
H0I31_10555	COG0116	Belongs to the methyltransferase superfamily
H0I31_10575	COG0776	regulation of translation
H0I31_10580	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
H0I31_10585	COG0514	ATP-dependent DNA helicase (RecQ)
H0I31_10600	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
H0I31_10610	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
H0I31_10615	COG0714	Associated with various cellular activities
H0I31_10625	COG1250	3-hydroxyacyl-CoA dehydrogenase
H0I31_10630	COG0673	inositol 2-dehydrogenase activity
H0I31_10635	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
H0I31_10650	COG0813	purine-nucleoside phosphorylase activity
H0I31_10680	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
H0I31_10695	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
H0I31_10700	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
H0I31_10700	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
H0I31_10730	COG0714	Associated with various cellular activities
H0I31_10750	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
H0I31_10780	COG3876	Protein conserved in bacteria
H0I31_10795	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
H0I31_10815	COG0812	UDP-N-acetylmuramate dehydrogenase activity
H0I31_10820	COG0436	Aminotransferase
H0I31_10835	COG0525	valine-tRNA ligase activity
H0I31_10860	COG1595	DNA-templated transcription, initiation
H0I31_10880	COG1730	sister chromatid segregation
H0I31_10905	COG0516	GMP reductase activity
H0I31_10905	COG0517	IMP dehydrogenase activity
H0I31_10920	COG0668	transmembrane transport
H0I31_10940	COG1301	dicarboxylic acid transport
H0I31_10945	COG2897	thiosulfate sulfurtransferase activity
H0I31_10970	COG0210	DNA helicase
H0I31_10980	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
H0I31_10990	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
H0I31_10995	COG0484	heat shock protein binding
H0I31_11010	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
H0I31_11025	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
H0I31_11045	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
H0I31_11140	COG4206	TonB-dependent receptor
H0I31_11145	COG3011	Protein conserved in bacteria
H0I31_11150	COG1136	(ABC) transporter
H0I31_11155	COG0577	efflux transmembrane transporter activity
H0I31_11155	COG1136	(ABC) transporter
H0I31_11160	COG1136	(ABC) transporter
H0I31_11160	COG0577	efflux transmembrane transporter activity
H0I31_11170	COG0404	The glycine cleavage system catalyzes the degradation of glycine
H0I31_11175	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
H0I31_11190	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
H0I31_11195	COG1028	Short-chain dehydrogenase reductase Sdr
H0I31_11200	COG3956	TIGRFAM MazG family protein
H0I31_11210	COG0242	peptide deformylase activity
H0I31_11215	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
H0I31_11220	COG2171	N-acyltransferase activity
H0I31_11230	COG2089	acid synthase
H0I31_11240	COG1083	cytidylyl-transferase
H0I31_11250	COG1086	Polysaccharide biosynthesis protein
H0I31_11255	COG0438	transferase activity, transferring glycosyl groups
H0I31_11260	COG0009	L-threonylcarbamoyladenylate synthase
H0I31_11265	COG0617	tRNA 3'-terminal CCA addition
H0I31_11265	COG0517	IMP dehydrogenase activity
H0I31_11265	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
H0I31_11270	COG1132	(ABC) transporter
H0I31_11275	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
H0I31_11280	COG0463	Glycosyl transferase, family 2
H0I31_11295	COG4974	Belongs to the 'phage' integrase family
H0I31_11305	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
H0I31_11320	COG1183	phosphatidylcholine synthase activity
H0I31_11325	COG1137	ATPase activity
H0I31_11335	COG0805	protein transport
H0I31_11345	COG0514	ATP-dependent DNA helicase (RecQ)
H0I31_11360	COG0686	Belongs to the AlaDH PNT family
H0I31_11365	COG0802	atpase or kinase
H0I31_11370	COG2204	response regulator
H0I31_11375	COG1078	dGTPase activity
H0I31_11380	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
H0I31_11385	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
H0I31_11385	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
H0I31_11390	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
H0I31_11395	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
H0I31_11405	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
H0I31_11410	COG0612	Peptidase, M16
H0I31_11415	COG1028	Short-chain dehydrogenase reductase Sdr
H0I31_11425	COG4191	Histidine kinase
H0I31_11430	COG2204	response regulator
H0I31_11440	COG1136	(ABC) transporter
H0I31_11440	COG4591	ABC-type transport system involved in lipoprotein release permease component
H0I31_11465	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
H0I31_11465	COG0047	phosphoribosylformylglycinamidine synthase activity
H0I31_11485	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
H0I31_11490	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
H0I31_11495	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
H0I31_11510	COG3958	Transketolase
H0I31_11515	COG0424	maF-like protein
H0I31_11525	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
H0I31_11535	COG0542	response to heat
H0I31_11555	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
H0I31_11580	COG1278	Cold shock
H0I31_11595	COG1979	alcohol dehydrogenase
H0I31_11610	COG1309	transcriptional regulator
H0I31_11625	COG1902	pentaerythritol trinitrate reductase activity
H0I31_11630	COG1764	response to oxidative stress
H0I31_11635	COG1064	alcohol dehydrogenase
H0I31_11645	COG0668	transmembrane transport
H0I31_11665	COG2095	MarC family integral membrane protein
H0I31_11690	COG3938	Belongs to the proline racemase family
H0I31_11695	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
H0I31_11700	COG2207	Transcriptional regulator
H0I31_11720	COG0300	oxidoreductase activity
H0I31_11730	COG2814	Major facilitator Superfamily
H0I31_11735	COG0564	pseudouridine synthase activity
H0I31_11745	COG1522	sequence-specific DNA binding
H0I31_11760	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
H0I31_11770	COG0539	negative regulation of cytoplasmic translation
H0I31_11790	COG1739	Uncharacterized protein family UPF0029
H0I31_11795	COG0697	spore germination
H0I31_11800	COG1011	Hydrolase
H0I31_11805	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
H0I31_11805	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
H0I31_11820	COG2890	protein-(glutamine-N5) methyltransferase activity
H0I31_11825	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
H0I31_11835	COG3813	Protein conserved in bacteria
H0I31_11870	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
H0I31_11890	COG0564	pseudouridine synthase activity
H0I31_11895	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
H0I31_11905	COG2318	DinB family
H0I31_11920	COG0167	dihydroorotate dehydrogenase activity
H0I31_11950	COG1363	Peptidase, m42
H0I31_11985	COG0488	(ABC) transporter
H0I31_12015	COG1607	acyl-coa hydrolase
H0I31_12035	COG2346	COG2346, Truncated hemoglobins
H0I31_12040	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
H0I31_12055	COG0861	Integral membrane protein TerC family
H0I31_12075	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
H0I31_12080	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
H0I31_12085	COG3263	regulation of cellular component size
H0I31_12100	COG4953	penicillin-binding protein 1C
H0I31_12110	COG0513	Belongs to the DEAD box helicase family
H0I31_12115	COG2197	response regulator
H0I31_12205	COG2373	Large extracellular alpha-helical protein
H0I31_12225	COG2340	Cysteine-rich secretory protein family
H0I31_12235	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
H0I31_12245	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
H0I31_12285	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
H0I31_12290	COG1482	cell wall glycoprotein biosynthetic process
H0I31_12300	COG0745	RESPONSE REGULATOR receiver
H0I31_12345	COG3279	Response regulator of the LytR AlgR family
H0I31_12355	COG4251	negative regulation of phosphorylation
H0I31_12365	COG4251	negative regulation of phosphorylation
H0I31_12375	COG0784	Response regulator, receiver
H0I31_12385	COG3012	SEC-C Motif Domain Protein
H0I31_12390	COG1022	Amp-dependent synthetase and ligase
H0I31_12395	COG1022	Amp-dependent synthetase and ligase
H0I31_12400	COG0564	pseudouridine synthase activity
H0I31_12405	COG2270	Major facilitator Superfamily
H0I31_12440	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
H0I31_12445	COG3340	Belongs to the peptidase S51 family
H0I31_12495	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
H0I31_12500	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
H0I31_12500	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
H0I31_12515	COG2860	membrane
H0I31_12530	COG0534	Mate efflux family protein
H0I31_12540	COG0012	GTP binding
H0I31_12545	COG1629	transport
H0I31_12545	COG4206	TonB-dependent receptor
H0I31_12550	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
H0I31_12560	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
H0I31_12565	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
H0I31_12575	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
H0I31_12580	COG2176	DNA-directed DNA polymerase activity
H0I31_12585	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
H0I31_12590	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
H0I31_12615	COG0697	spore germination
H0I31_12625	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
H0I31_12630	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
H0I31_12630	COG0140	phosphoribosyl-ATP diphosphatase activity
H0I31_12635	COG0107	imidazoleglycerol-phosphate synthase activity
H0I31_12640	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
H0I31_12650	COG0131	Imidazoleglycerol-phosphate dehydratase
H0I31_12655	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
H0I31_12660	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
H0I31_12665	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
H0I31_12670	COG1217	gtp-binding protein TYPA
H0I31_12685	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
H0I31_12695	COG0783	Belongs to the Dps family
H0I31_12730	COG0438	transferase activity, transferring glycosyl groups
H0I31_12735	COG3959	Transketolase, thiamine diphosphate binding domain
H0I31_12760	COG2195	Cleaves the N-terminal amino acid of tripeptides
H0I31_12765	COG0019	diaminopimelate decarboxylase activity
H0I31_12770	COG0359	binds to the 23S rRNA
H0I31_12775	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
H0I31_12780	COG0360	Binds together with S18 to 16S ribosomal RNA
H0I31_12805	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
H0I31_12815	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
H0I31_12825	COG0076	glutamate decarboxylase activity
H0I31_12835	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
H0I31_12840	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
H0I31_12850	COG1410	methionine synthase
H0I31_12850	COG0646	methionine synthase
H0I31_12860	COG1045	serine acetyltransferase
H0I31_12865	COG0633	Ferredoxin
H0I31_12870	COG0492	ferredoxin-NADP+ reductase activity
H0I31_12875	COG1648	precorrin-2 dehydrogenase activity
H0I31_12875	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
H0I31_12885	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
H0I31_12890	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein