BK011_00005 SM00382 ATPases associated with a variety of cellular activities BK011_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain BK011_00010 SM00480 DNA polymerase III beta subunit BK011_00025 SM00387 Histidine kinase-like ATPases BK011_00025 SM00433 TopoisomeraseII BK011_00030 SM00434 DNA Topoisomerase IV BK011_00035 SM00382 ATPases associated with a variety of cellular activities BK011_00035 SM00930 BK011_00035 BK011_00080 SM00448 cheY-homologous receiver domain BK011_00080 SM00862 Transcriptional regulatory protein, C terminal BK011_00085 SM00387 Histidine kinase-like ATPases BK011_00085 SM00388 His Kinase A (phosphoacceptor) domain BK011_00105 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BK011_00115 SM00650 Ribosomal RNA adenine dimethylases BK011_00140 SM01400 BK011_00140 BK011_00150 SM00487 DEAD-like helicases superfamily BK011_00150 SM00490 helicase superfamily c-terminal domain BK011_00150 SM00982 BK011_00150 BK011_00150 SM01058 CarD-like/TRCF domain BK011_00205 SM00316 Ribosomal protein S1-like RNA-binding domain BK011_00280 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BK011_00280 SM00292 breast cancer carboxy-terminal domain BK011_00280 SM00532 Ligase N family BK011_00330 SM00316 Ribosomal protein S1-like RNA-binding domain BK011_00330 SM00732 Likely ribonuclease with RNase H fold. BK011_00335 SM00382 ATPases associated with a variety of cellular activities BK011_00395 SM00530 Helix-turn-helix XRE-family like proteins BK011_00425 SM00450 Rhodanese Homology Domain BK011_00475 SM00861 Transketolase, pyrimidine binding domain BK011_00525 SM00450 Rhodanese Homology Domain BK011_00615 SM00382 ATPases associated with a variety of cellular activities BK011_00685 SM01221 BK011_00685 BK011_00685 SM01222 BK011_00685 BK011_00715 SM00764 Citrate lyase ligase C-terminal domain BK011_00760 SM00363 S4 RNA-binding domain BK011_00765 SM00382 ATPases associated with a variety of cellular activities BK011_00775 SM00977 TilS substrate C-terminal domain BK011_00785 SM00642 Alpha-amylase domain BK011_00800 SM01217 BK011_00800 BK011_00940 SM00861 Transketolase, pyrimidine binding domain BK011_00945 SM01228 BK011_00945 BK011_00960 SM00470 ParB-like nuclease domain BK011_01065 SM00347 helix_turn_helix multiple antibiotic resistance protein BK011_01080 SM01403 BK011_01080 BK011_01100 SM01382 BK011_01100 BK011_01100 SM01383 BK011_01100 BK011_01115 SM00322 K homology RNA-binding domain BK011_01135 SM01374 BK011_01135 BK011_01200 SM00316 Ribosomal protein S1-like RNA-binding domain BK011_01220 SM00662 RNA polymerases D BK011_01245 SM00382 ATPases associated with a variety of cellular activities BK011_01280 SM00382 ATPases associated with a variety of cellular activities BK011_01285 SM00382 ATPases associated with a variety of cellular activities BK011_01420 SM00840 BK011_01420 BK011_01435 SM00967 RNA 2'-O ribose methyltransferase substrate binding BK011_01450 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BK011_01450 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BK011_01480 SM00649 Ribosomal protein L11/L12 BK011_01510 SM00663 RNA polymerase I subunit A N-terminus BK011_01560 SM00838 Elongation factor G C-terminus BK011_01560 SM00889 Elongation factor G, domain IV BK011_01620 SM00850 LytTr DNA-binding domain BK011_01635 SM00382 ATPases associated with a variety of cellular activities BK011_01745 SM00448 cheY-homologous receiver domain BK011_01745 SM00862 Transcriptional regulatory protein, C terminal BK011_01750 SM00387 Histidine kinase-like ATPases BK011_01810 SM00937 BK011_01810 BK011_01825 SM00838 Elongation factor G C-terminus BK011_01880 SM00382 ATPases associated with a variety of cellular activities BK011_01965 SM00382 ATPases associated with a variety of cellular activities BK011_01965 SM00464 Found in ATP-dependent protease La (LON) BK011_01995 SM01126 BK011_01995 BK011_02050 SM01230 BK011_02050 BK011_02080 SM00116 Domain in cystathionine beta-synthase and other proteins. BK011_02080 SM00382 ATPases associated with a variety of cellular activities BK011_02100 SM00382 ATPases associated with a variety of cellular activities BK011_02115 SM00345 helix_turn_helix gluconate operon transcriptional repressor BK011_02135 SM00342 helix_turn_helix, arabinose operon control protein BK011_02170 SM00382 ATPases associated with a variety of cellular activities BK011_02185 SM00421 helix_turn_helix, Lux Regulon BK011_02185 SM00448 cheY-homologous receiver domain BK011_02205 SM00382 ATPases associated with a variety of cellular activities BK011_02260 SM00642 Alpha-amylase domain BK011_02265 SM00354 helix_turn _helix lactose operon repressor BK011_02280 SM00091 PAS domain BK011_02295 SM00881 CoA binding domain BK011_02325 SM00116 Domain in cystathionine beta-synthase and other proteins. BK011_02325 SM01240 BK011_02325 BK011_02345 SM00984 UDP binding domain BK011_02440 SM00530 Helix-turn-helix XRE-family like proteins BK011_02450 SM00857 Resolvase, N terminal domain BK011_02455 SM00857 Resolvase, N terminal domain BK011_02470 SM00954 Region found in RelA / SpoT proteins BK011_02495 SM00382 ATPases associated with a variety of cellular activities BK011_02520 SM00642 Alpha-amylase domain BK011_02580 SM00345 helix_turn_helix gluconate operon transcriptional repressor BK011_02580 SM00866 BK011_02580 BK011_02630 SM00919 Malic enzyme, NAD binding domain BK011_02630 SM01274 BK011_02630 BK011_02640 SM01022 BK011_02640 BK011_02645 SM00341 Helicase and RNase D C-terminal BK011_02660 SM00530 Helix-turn-helix XRE-family like proteins BK011_02715 SM00387 Histidine kinase-like ATPases BK011_02715 SM00388 His Kinase A (phosphoacceptor) domain BK011_02740 SM00382 ATPases associated with a variety of cellular activities BK011_02760 SM00342 helix_turn_helix, arabinose operon control protein BK011_02785 SM00345 helix_turn_helix gluconate operon transcriptional repressor BK011_02830 SM00900 BK011_02830 BK011_02835 SM00347 helix_turn_helix multiple antibiotic resistance protein BK011_02845 SM00862 Transcriptional regulatory protein, C terminal BK011_02860 SM00382 ATPases associated with a variety of cellular activities BK011_02885 SM01266 BK011_02885 BK011_02930 SM00155 Phospholipase D. Active site motifs. BK011_02975 SM00836 DALR anticodon binding domain BK011_02975 SM01016 Arginyl tRNA synthetase N terminal dom BK011_02985 SM00998 Adenylosuccinate lyase C-terminus BK011_02990 SM00788 Adenylosuccinate synthetase BK011_03000 SM00518 AP endonuclease family 2 BK011_03005 SM00487 DEAD-like helicases superfamily BK011_03005 SM00490 helicase superfamily c-terminal domain BK011_03025 SM00363 S4 RNA-binding domain BK011_03030 SM00861 Transketolase, pyrimidine binding domain BK011_03060 SM00382 ATPases associated with a variety of cellular activities BK011_03180 SM01126 BK011_03180 BK011_03185 SM00052 Putative diguanylate phosphodiesterase BK011_03185 SM00267 diguanylate cyclase BK011_03190 SM00052 Putative diguanylate phosphodiesterase BK011_03190 SM00267 diguanylate cyclase BK011_03195 SM00387 Histidine kinase-like ATPases BK011_03195 SM00388 His Kinase A (phosphoacceptor) domain BK011_03195 SM00448 cheY-homologous receiver domain BK011_03260 SM00267 diguanylate cyclase BK011_03270 SM00829 Enoylreductase BK011_03380 SM00850 LytTr DNA-binding domain BK011_03420 SM00825 Beta-ketoacyl synthase BK011_03425 SM00822 BK011_03425 BK011_03430 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BK011_03455 SM00878 Biotin carboxylase C-terminal domain BK011_03490 SM01350 BK011_03490 BK011_03495 SM00478 endonuclease III BK011_03530 SM00072 Guanylate kinase homologues. BK011_03550 SM00267 diguanylate cyclase BK011_03550 SM00448 cheY-homologous receiver domain BK011_03580 SM00244 prohibitin homologues BK011_03625 SM00382 ATPases associated with a variety of cellular activities BK011_03650 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BK011_03660 SM00100 Cyclic nucleotide-monophosphate binding domain BK011_03660 SM00419 helix_turn_helix, cAMP Regulatory protein BK011_03675 SM00530 Helix-turn-helix XRE-family like proteins BK011_03715 SM00347 helix_turn_helix multiple antibiotic resistance protein BK011_03750 SM00487 DEAD-like helicases superfamily BK011_03750 SM00490 helicase superfamily c-terminal domain BK011_03770 SM00245 tail specific protease BK011_03780 SM00937 BK011_03780 BK011_03785 SM00957 SecA DEAD-like domain BK011_03785 SM00958 SecA preprotein cross-linking domain BK011_03825 SM00487 DEAD-like helicases superfamily BK011_03825 SM00490 helicase superfamily c-terminal domain BK011_03850 SM00316 Ribosomal protein S1-like RNA-binding domain BK011_03865 SM00382 ATPases associated with a variety of cellular activities BK011_03905 SM00849 Metallo-beta-lactamase superfamily BK011_03910 SM00479 BK011_03910 BK011_03915 SM00465 GIY-YIG type nucleases (URI domain) BK011_03920 SM01409 BK011_03920 BK011_03925 SM00072 Guanylate kinase homologues. BK011_03940 SM00530 Helix-turn-helix XRE-family like proteins BK011_03950 SM00382 ATPases associated with a variety of cellular activities BK011_03975 SM00838 Elongation factor G C-terminus BK011_03975 SM00889 Elongation factor G, domain IV BK011_03980 SM01234 BK011_03980 BK011_03985 SM00530 Helix-turn-helix XRE-family like proteins BK011_04035 SM00946 Prolyl-tRNA synthetase, C-terminal BK011_04055 SM00382 ATPases associated with a variety of cellular activities BK011_04065 SM00062 Bacterial periplasmic substrate-binding proteins BK011_04070 SM00357 Cold shock protein domain BK011_04090 SM00853 MutL C terminal dimerisation domain BK011_04090 SM01340 BK011_04090 BK011_04095 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BK011_04095 SM00534 ATPase domain of DNA mismatch repair MUTS family BK011_04110 SM00729 Elongator protein 3, MiaB family, Radical SAM BK011_04120 SM00322 K homology RNA-binding domain BK011_04120 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BK011_04130 SM00382 ATPases associated with a variety of cellular activities BK011_04155 SM00382 ATPases associated with a variety of cellular activities BK011_04170 SM00479 BK011_04170 BK011_04200 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BK011_04245 SM00732 Likely ribonuclease with RNase H fold. BK011_04250 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BK011_04260 SM00014 Acid phosphatase homologues BK011_04275 SM00316 Ribosomal protein S1-like RNA-binding domain BK011_04275 SM00955 BK011_04275 BK011_04280 SM01192 BK011_04280 BK011_04280 SM01193 BK011_04280 BK011_04295 SM01126 BK011_04295 BK011_04325 SM01126 BK011_04325 BK011_04385 SM00382 ATPases associated with a variety of cellular activities BK011_04390 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BK011_04415 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BK011_04415 SM01232 BK011_04415 BK011_04420 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BK011_04420 SM00474 3'-5' exonuclease BK011_04420 SM00475 5'-3' exonuclease BK011_04420 SM00482 DNA polymerase A domain BK011_04425 SM00962 SRP54-type protein, GTPase domain BK011_04425 SM00963 SRP54-type protein, helical bundle domain BK011_04435 SM00382 ATPases associated with a variety of cellular activities BK011_04435 SM00962 SRP54-type protein, GTPase domain BK011_04435 SM00963 SRP54-type protein, helical bundle domain BK011_04445 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BK011_04445 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BK011_04445 SM00493 BK011_04445 BK011_04470 SM00843 BK011_04470 BK011_04565 SM00857 Resolvase, N terminal domain BK011_04600 SM00347 helix_turn_helix multiple antibiotic resistance protein BK011_04615 SM00400 zinc finger BK011_04615 SM00493 BK011_04615 BK011_04675 SM00849 Metallo-beta-lactamase superfamily BK011_04705 SM00116 Domain in cystathionine beta-synthase and other proteins. BK011_04705 SM00924 MgtE intracellular N domain BK011_04710 SM00924 MgtE intracellular N domain BK011_04715 SM00529 Helix-turn-helix diphteria tox regulatory element BK011_04735 SM00382 ATPases associated with a variety of cellular activities BK011_04740 SM00382 ATPases associated with a variety of cellular activities BK011_04765 SM00671 Sel1-like repeats. BK011_04775 SM00487 DEAD-like helicases superfamily BK011_04775 SM00490 helicase superfamily c-terminal domain BK011_04785 SM01126 BK011_04785 BK011_04840 SM00530 Helix-turn-helix XRE-family like proteins BK011_04855 SM00481 DNA polymerase alpha chain like domain BK011_04870 SM00382 ATPases associated with a variety of cellular activities BK011_04875 SM00382 ATPases associated with a variety of cellular activities BK011_04880 SM00530 Helix-turn-helix XRE-family like proteins BK011_04885 SM00478 endonuclease III BK011_04895 SM00358 Double-stranded RNA binding motif BK011_04895 SM00535 Ribonuclease III family BK011_04905 SM00487 DEAD-like helicases superfamily BK011_04905 SM00490 helicase superfamily c-terminal domain BK011_04915 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BK011_04930 SM00830 Chorismate mutase type II BK011_05020 SM00849 Metallo-beta-lactamase superfamily BK011_05060 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BK011_05065 SM00382 ATPases associated with a variety of cellular activities BK011_05120 SM01011 Aminopeptidase P, N-terminal domain BK011_05155 SM00959 Rho termination factor, N-terminal domain BK011_05185 SM01207 BK011_05185 BK011_05190 SM00387 Histidine kinase-like ATPases BK011_05190 SM00433 TopoisomeraseII BK011_05195 SM00434 DNA Topoisomerase IV BK011_05235 SM00893 Electron transfer flavoprotein domain BK011_05240 SM00893 Electron transfer flavoprotein domain BK011_05250 SM00822 BK011_05250 BK011_05270 SM00382 ATPases associated with a variety of cellular activities BK011_05275 SM00382 ATPases associated with a variety of cellular activities BK011_05300 SM00870 BK011_05300 BK011_05320 SM00729 Elongator protein 3, MiaB family, Radical SAM BK011_05325 SM00838 Elongation factor G C-terminus BK011_05335 SM01091 Transporter associated domain BK011_05340 SM01091 Transporter associated domain BK011_05370 SM01091 Transporter associated domain BK011_05380 SM00316 Ribosomal protein S1-like RNA-binding domain BK011_05380 SM00322 K homology RNA-binding domain BK011_05390 SM01126 BK011_05390 BK011_05405 SM00267 diguanylate cyclase BK011_05420 SM01126 BK011_05420 BK011_05430 SM01387 BK011_05430 BK011_05440 SM00904 Riboflavin kinase BK011_05470 SM00463 Small MutS-related domain BK011_05470 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BK011_05470 SM00534 ATPase domain of DNA mismatch repair MUTS family BK011_05480 SM00363 S4 RNA-binding domain BK011_05540 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BK011_05540 SM00954 Region found in RelA / SpoT proteins BK011_05550 SM00382 ATPases associated with a variety of cellular activities BK011_05565 SM01005 Alanine racemase, C-terminal domain BK011_05610 SM00849 Metallo-beta-lactamase superfamily BK011_05640 SM00244 prohibitin homologues BK011_05650 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BK011_05655 SM00855 Phosphoglycerate mutase family BK011_05660 SM00563 Phosphate acyltransferases BK011_05725 SM01133 BK011_05725 BK011_05765 SM00864 Tubulin/FtsZ family, GTPase domain BK011_05765 SM00865 Tubulin/FtsZ family, C-terminal domain BK011_05785 SM00478 endonuclease III BK011_05785 SM00525 BK011_05785 BK011_05790 SM00855 Phosphoglycerate mutase family BK011_05800 SM00382 ATPases associated with a variety of cellular activities BK011_05805 SM00382 ATPases associated with a variety of cellular activities BK011_05855 SM00363 S4 RNA-binding domain BK011_05880 SM00347 helix_turn_helix multiple antibiotic resistance protein BK011_05930 SM00636 BK011_05930 BK011_05945 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BK011_05950 SM01240 BK011_05950 BK011_06015 SM00382 ATPases associated with a variety of cellular activities BK011_06020 SM00382 ATPases associated with a variety of cellular activities BK011_06070 SM00530 Helix-turn-helix XRE-family like proteins BK011_06075 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BK011_06095 SM00450 Rhodanese Homology Domain BK011_06130 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BK011_06140 SM00116 Domain in cystathionine beta-synthase and other proteins. BK011_06155 SM00563 Phosphate acyltransferases BK011_06160 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BK011_06160 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BK011_06210 SM00851 MGS-like domain BK011_06245 SM01120 BK011_06245 BK011_06245 SM01121 BK011_06245 BK011_06250 SM00271 DnaJ molecular chaperone homology domain BK011_06270 SM00849 Metallo-beta-lactamase superfamily BK011_06305 SM00382 ATPases associated with a variety of cellular activities BK011_06410 SM00354 helix_turn _helix lactose operon repressor BK011_06450 SM00052 Putative diguanylate phosphodiesterase BK011_06450 SM00267 diguanylate cyclase BK011_06465 SM00883 Chaperonin 10 Kd subunit BK011_06530 SM00052 Putative diguanylate phosphodiesterase BK011_06555 SM00248 ankyrin repeats BK011_06560 SM00411 bacterial (prokaryotic) histone like domain BK011_06575 SM00316 Ribosomal protein S1-like RNA-binding domain BK011_06585 SM00363 S4 RNA-binding domain BK011_06590 SM00841 Elongation factor P, C-terminal BK011_06590 SM01185 BK011_06590 BK011_06595 SM00382 ATPases associated with a variety of cellular activities BK011_06600 SM00382 ATPases associated with a variety of cellular activities BK011_06730 SM00507 HNH nucleases BK011_06840 SM00530 Helix-turn-helix XRE-family like proteins BK011_06850 SM00530 Helix-turn-helix XRE-family like proteins BK011_06860 SM00857 Resolvase, N terminal domain BK011_07005 SM00530 Helix-turn-helix XRE-family like proteins BK011_07015 SM00966 SpoVT / AbrB like domain BK011_07035 SM00530 Helix-turn-helix XRE-family like proteins BK011_07060 SM00966 SpoVT / AbrB like domain BK011_07065 SM00530 Helix-turn-helix XRE-family like proteins BK011_07110 SM00382 ATPases associated with a variety of cellular activities BK011_07115 SM00382 ATPases associated with a variety of cellular activities BK011_07120 SM00857 Resolvase, N terminal domain BK011_07125 SM00857 Resolvase, N terminal domain BK011_07200 SM00382 ATPases associated with a variety of cellular activities BK011_07270 SM01120 BK011_07270 BK011_07270 SM01121 BK011_07270 BK011_07280 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain BK011_07305 SM00873 B3/4 domain BK011_07305 SM00874 tRNA synthetase B5 domain BK011_07305 SM00896 Ferredoxin-fold anticodon binding domain BK011_07320 SM00479 BK011_07320 BK011_07320 SM00481 DNA polymerase alpha chain like domain BK011_07330 SM00729 Elongator protein 3, MiaB family, Radical SAM BK011_07365 SM00062 Bacterial periplasmic substrate-binding proteins BK011_07375 SM00382 ATPases associated with a variety of cellular activities BK011_07385 SM00642 Alpha-amylase domain BK011_07390 SM00642 Alpha-amylase domain BK011_07395 SM00354 helix_turn _helix lactose operon repressor BK011_07400 SM00642 Alpha-amylase domain BK011_07405 SM00642 Alpha-amylase domain BK011_07410 SM00642 Alpha-amylase domain BK011_07440 SM00642 Alpha-amylase domain BK011_07465 SM00902 Iron hydrogenase small subunit BK011_07470 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BK011_07480 SM00387 Histidine kinase-like ATPases BK011_07485 SM00481 DNA polymerase alpha chain like domain BK011_07515 SM00642 Alpha-amylase domain BK011_07580 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BK011_07585 SM01059 Chloramphenicol acetyltransferase BK011_07600 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BK011_07600 SM00387 Histidine kinase-like ATPases BK011_07600 SM00388 His Kinase A (phosphoacceptor) domain BK011_07600 SM00448 cheY-homologous receiver domain BK011_07615 SM00704 CDGSH-type zinc finger. Function unknown. BK011_07660 SM00831 Cation transporter/ATPase, N-terminus BK011_07690 SM00226 Low molecular weight phosphatase family BK011_07710 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BK011_07715 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BK011_07715 SM00267 diguanylate cyclase BK011_07740 SM00530 Helix-turn-helix XRE-family like proteins BK011_07850 SM00530 Helix-turn-helix XRE-family like proteins BK011_07865 SM00382 ATPases associated with a variety of cellular activities BK011_07890 SM00226 Low molecular weight phosphatase family BK011_07895 SM00382 ATPases associated with a variety of cellular activities BK011_07910 SM00382 ATPases associated with a variety of cellular activities BK011_07910 SM01086 C-terminal, D2-small domain, of ClpB protein BK011_07930 SM00052 Putative diguanylate phosphodiesterase BK011_07930 SM00267 diguanylate cyclase BK011_07940 SM00267 diguanylate cyclase BK011_07940 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BK011_07990 SM00530 Helix-turn-helix XRE-family like proteins BK011_08000 SM00530 Helix-turn-helix XRE-family like proteins BK011_08135 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BK011_08170 SM00959 Rho termination factor, N-terminal domain BK011_08200 SM00986 Uracil DNA glycosylase superfamily BK011_08200 SM00987 UreE urease accessory protein, C-terminal domain BK011_08220 SM00495 Chitin-binding domain type 3 BK011_08250 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BK011_08255 SM01118 BK011_08255 BK011_08285 SM00363 S4 RNA-binding domain BK011_08295 SM00354 helix_turn _helix lactose operon repressor BK011_08365 SM00363 S4 RNA-binding domain BK011_08365 SM01390 BK011_08365 BK011_08380 SM00530 Helix-turn-helix XRE-family like proteins BK011_08395 SM00382 ATPases associated with a variety of cellular activities BK011_08440 SM00382 ATPases associated with a variety of cellular activities BK011_08465 SM00382 ATPases associated with a variety of cellular activities BK011_08470 SM00382 ATPases associated with a variety of cellular activities BK011_08490 SM00245 tail specific protease BK011_08495 SM00890 Domain of unknown function BK011_08540 SM00387 Histidine kinase-like ATPases BK011_08540 SM00388 His Kinase A (phosphoacceptor) domain BK011_08545 SM00448 cheY-homologous receiver domain BK011_08545 SM00862 Transcriptional regulatory protein, C terminal BK011_08555 SM00382 ATPases associated with a variety of cellular activities BK011_08575 SM00530 Helix-turn-helix XRE-family like proteins BK011_08595 SM00267 diguanylate cyclase BK011_08605 SM00382 ATPases associated with a variety of cellular activities BK011_08630 SM00871 Bacterial transcription activator, effector binding domain BK011_08645 SM00382 ATPases associated with a variety of cellular activities BK011_08695 SM01350 BK011_08695 BK011_08720 SM01126 BK011_08720 BK011_08775 SM00487 DEAD-like helicases superfamily BK011_08775 SM00490 helicase superfamily c-terminal domain BK011_08845 SM00382 ATPases associated with a variety of cellular activities BK011_08865 SM00387 Histidine kinase-like ATPases BK011_08870 SM00448 cheY-homologous receiver domain BK011_08870 SM00862 Transcriptional regulatory protein, C terminal BK011_08895 SM00530 Helix-turn-helix XRE-family like proteins BK011_08930 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BK011_08930 SM00091 PAS domain BK011_08930 SM00267 diguanylate cyclase BK011_08930 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BK011_08940 SM00342 helix_turn_helix, arabinose operon control protein BK011_08960 SM00358 Double-stranded RNA binding motif BK011_08960 SM00535 Ribonuclease III family BK011_08965 SM00487 DEAD-like helicases superfamily BK011_08965 SM00490 helicase superfamily c-terminal domain BK011_08990 SM00487 DEAD-like helicases superfamily BK011_08990 SM00490 helicase superfamily c-terminal domain BK011_09050 SM00859 Semialdehyde dehydrogenase, NAD binding domain BK011_09070 SM00267 diguanylate cyclase BK011_09090 SM00382 ATPases associated with a variety of cellular activities BK011_09110 SM00530 Helix-turn-helix XRE-family like proteins BK011_09130 SM00382 ATPases associated with a variety of cellular activities BK011_09135 SM00345 helix_turn_helix gluconate operon transcriptional repressor BK011_09140 SM00267 diguanylate cyclase BK011_09140 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BK011_09165 SM00642 Alpha-amylase domain BK011_09185 SM00354 helix_turn _helix lactose operon repressor BK011_09220 SM01321 BK011_09220 BK011_09225 SM00866 BK011_09225 BK011_09230 SM00345 helix_turn_helix gluconate operon transcriptional repressor BK011_09230 SM00866 BK011_09230 BK011_09235 SM00881 CoA binding domain BK011_09260 SM00861 Transketolase, pyrimidine binding domain BK011_09320 SM00244 prohibitin homologues BK011_09350 SM00354 helix_turn _helix lactose operon repressor BK011_09360 SM01217 BK011_09360 BK011_09425 SM00642 Alpha-amylase domain BK011_09475 SM00327 von Willebrand factor (vWF) type A domain BK011_09540 SM00382 ATPases associated with a variety of cellular activities BK011_09645 SM00642 Alpha-amylase domain BK011_09650 SM00354 helix_turn _helix lactose operon repressor BK011_09690 SM00382 ATPases associated with a variety of cellular activities BK011_09695 SM00382 ATPases associated with a variety of cellular activities BK011_09770 SM00046 Diacylglycerol kinase catalytic domain (presumed) BK011_09805 SM00882 Coenzyme A transferase BK011_09810 SM00882 Coenzyme A transferase BK011_09825 SM00900 BK011_09825 BK011_09850 SM00861 Transketolase, pyrimidine binding domain BK011_09885 SM00342 helix_turn_helix, arabinose operon control protein BK011_09895 SM00899 BK011_09895 BK011_09905 SM00267 diguanylate cyclase BK011_09910 SM01126 BK011_09910 BK011_09935 SM00382 ATPases associated with a variety of cellular activities BK011_10010 SM00062 Bacterial periplasmic substrate-binding proteins BK011_10030 SM00900 BK011_10030 BK011_10075 SM00382 ATPases associated with a variety of cellular activities BK011_10090 SM00345 helix_turn_helix gluconate operon transcriptional repressor BK011_10110 SM00387 Histidine kinase-like ATPases BK011_10150 SM00488 BK011_10150 BK011_10150 SM00491 BK011_10150 BK011_10175 SM00267 diguanylate cyclase BK011_10180 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BK011_10180 SM00091 PAS domain BK011_10180 SM00267 diguanylate cyclase BK011_10270 SM00635 Bacterial Ig-like domain 2 BK011_10270 SM00644 BK011_10270 BK011_10310 SM00893 Electron transfer flavoprotein domain BK011_10315 SM00893 Electron transfer flavoprotein domain BK011_10390 SM00493 BK011_10390 BK011_10400 SM00382 ATPases associated with a variety of cellular activities BK011_10460 SM00382 ATPases associated with a variety of cellular activities BK011_10480 SM00393 Putative single-stranded nucleic acids-binding domain BK011_10480 SM01245 BK011_10480