locus-tag class description KHQ88_00010 IPR013785 Aldolase-type TIM barrel KHQ88_00010 IPR000771 Fructose-bisphosphate aldolase, class-II KHQ88_00010 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 KHQ88_00015 IPR000577 Carbohydrate kinase, FGGY KHQ88_00015 IPR018485 Carbohydrate kinase, FGGY, C-terminal KHQ88_00015 IPR018483 Carbohydrate kinase, FGGY, conserved site KHQ88_00015 IPR018484 Carbohydrate kinase, FGGY, N-terminal KHQ88_00015 IPR006000 Xylulokinase KHQ88_00020 IPR003474 Gluconate transporter KHQ88_00025 IPR036390 Winged helix DNA-binding domain superfamily KHQ88_00025 IPR018356 Transcription regulator, HTH DeoR-type, conserved site KHQ88_00025 IPR036388 Winged helix-like DNA-binding domain superfamily KHQ88_00025 IPR001034 DeoR-type HTH domain KHQ88_00025 IPR014036 DeoR C-terminal sensor domain KHQ88_00025 IPR037171 NagB/RpiA transferase-like KHQ88_00030 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily KHQ88_00030 IPR010737 Four-carbon acid sugar kinase, N-terminal domain KHQ88_00030 IPR031475 Nucleotide-binding C-terminal domain KHQ88_00030 IPR042213 Nucleotide-binding, C-terminal domain superfamily KHQ88_00035 IPR005255 PdxA family KHQ88_00040 IPR012340 Nucleic acid-binding, OB-fold KHQ88_00040 IPR022967 RNA-binding domain, S1 KHQ88_00040 IPR003029 S1 domain KHQ88_00045 IPR035476 Phosphoglucose isomerase, SIS domain 1 KHQ88_00045 IPR001672 Phosphoglucose isomerase (PGI) KHQ88_00045 IPR018189 Phosphoglucose isomerase, conserved site KHQ88_00045 IPR035482 Phosphoglucose isomerase, SIS domain 2 KHQ88_00055 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE KHQ88_00055 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_00060 IPR000905 Gcp-like domain KHQ88_00060 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB KHQ88_00070 IPR000905 Gcp-like domain KHQ88_00070 IPR017861 Kae1/TsaD family KHQ88_00070 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD KHQ88_00075 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily KHQ88_00075 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold KHQ88_00075 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal KHQ88_00075 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain KHQ88_00075 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily KHQ88_00075 IPR000924 Glutamyl/glutaminyl-tRNA synthetase KHQ88_00075 IPR022861 Glutamine-tRNA ligase, bacterial KHQ88_00075 IPR004514 Glutamine-tRNA synthetase KHQ88_00075 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site KHQ88_00075 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain KHQ88_00080 IPR005751 ATP-dependent DNA helicase PcrA KHQ88_00080 IPR013986 DExx box DNA helicase domain superfamily KHQ88_00080 IPR014017 UvrD-like DNA helicase, C-terminal KHQ88_00080 IPR000212 DNA helicase, UvrD/REP type KHQ88_00080 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_00080 IPR014016 UvrD-like helicase, ATP-binding domain KHQ88_00080 IPR034739 UvrD/AddA helicase, N-terminal KHQ88_00085 IPR012340 Nucleic acid-binding, OB-fold KHQ88_00085 IPR004150 NAD-dependent DNA ligase, OB-fold KHQ88_00085 IPR013840 NAD-dependent DNA ligase, N-terminal KHQ88_00085 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type KHQ88_00085 IPR010994 RuvA domain 2-like KHQ88_00085 IPR013839 NAD-dependent DNA ligase, adenylation KHQ88_00085 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 KHQ88_00085 IPR033136 NAD-dependent DNA ligase, conserved site KHQ88_00085 IPR001679 NAD-dependent DNA ligase KHQ88_00085 IPR018239 NAD-dependent DNA ligase, active site KHQ88_00085 IPR041663 DisA/LigA, helix-hairpin-helix motif KHQ88_00085 IPR036420 BRCT domain superfamily KHQ88_00085 IPR001357 BRCT domain KHQ88_00090 IPR003439 ABC transporter-like KHQ88_00090 IPR017871 ABC transporter, conserved site KHQ88_00090 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_00090 IPR004602 UvrABC system subunit A KHQ88_00090 IPR041552 UvrA DNA-binding domain KHQ88_00090 IPR041102 UvrA, interaction domain KHQ88_00100 IPR003755 HPr(Ser) kinase/phosphorylase KHQ88_00100 IPR011104 HPr kinase/phosphorylase, C-terminal KHQ88_00100 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal KHQ88_00100 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily KHQ88_00105 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt KHQ88_00110 IPR027434 Homing endonuclease KHQ88_00110 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain KHQ88_00110 IPR003802 Sporulation regulator WhiA KHQ88_00110 IPR023054 Sporulation regulator WhiA, C-terminal KHQ88_00110 IPR036388 Winged helix-like DNA-binding domain superfamily KHQ88_00110 IPR039518 WhiA, LAGLIDADG-like domain KHQ88_00115 IPR008278 4'-phosphopantetheinyl transferase domain KHQ88_00115 IPR037143 4'-phosphopantetheinyl transferase domain superfamily KHQ88_00115 IPR002582 Holo-[acyl carrier protein] synthase KHQ88_00115 IPR004568 Phosphopantetheine-protein transferase domain KHQ88_00125 IPR006641 YqgF/RNase H-like domain KHQ88_00125 IPR032639 Tex protein, YqgF-like domain KHQ88_00125 IPR018974 Tex-like protein, N-terminal KHQ88_00125 IPR037027 YqgF/RNase H-like domain superfamily KHQ88_00125 IPR023319 Tex-like protein, HTH domain superfamily KHQ88_00125 IPR023323 Tex-like domain superfamily KHQ88_00125 IPR010994 RuvA domain 2-like KHQ88_00125 IPR022967 RNA-binding domain, S1 KHQ88_00125 IPR012337 Ribonuclease H-like superfamily KHQ88_00125 IPR012340 Nucleic acid-binding, OB-fold KHQ88_00125 IPR041692 HHH domain 9 KHQ88_00125 IPR003029 S1 domain KHQ88_00170 IPR005524 Predicted permease DUF318 KHQ88_00185 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily KHQ88_00185 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta KHQ88_00185 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal KHQ88_00185 IPR013760 DNA topoisomerase, type IIA-like domain superfamily KHQ88_00185 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal KHQ88_00185 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat KHQ88_00185 IPR005743 DNA gyrase, subunit A KHQ88_00190 IPR034160 DNA gyrase subunit B, TOPRIM domain KHQ88_00190 IPR006171 TOPRIM domain KHQ88_00190 IPR018522 DNA topoisomerase, type IIA, conserved site KHQ88_00190 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 KHQ88_00190 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal KHQ88_00190 IPR013760 DNA topoisomerase, type IIA-like domain superfamily KHQ88_00190 IPR002288 DNA gyrase B subunit, C-terminal KHQ88_00190 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup KHQ88_00190 IPR020568 Ribosomal protein S5 domain 2-type fold KHQ88_00190 IPR036890 Histidine kinase/HSP90-like ATPase superfamily KHQ88_00190 IPR003594 Histidine kinase/HSP90-like ATPase KHQ88_00190 IPR011557 DNA gyrase, subunit B KHQ88_00190 IPR001241 DNA topoisomerase, type IIA KHQ88_00195 IPR042174 DNA-binding RecF, domain 2 KHQ88_00195 IPR003395 RecF/RecN/SMC, N-terminal KHQ88_00195 IPR001238 DNA-binding, RecF KHQ88_00195 IPR018078 DNA-binding, RecF, conserved site KHQ88_00195 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_00205 IPR036101 CarD-like/TRCF domain superfamily KHQ88_00205 IPR003711 CarD-like/TRCF domain KHQ88_00205 IPR011545 DEAD/DEAH box helicase domain KHQ88_00205 IPR014001 Helicase superfamily 1/2, ATP-binding domain KHQ88_00205 IPR001650 Helicase, C-terminal KHQ88_00205 IPR004576 Transcription-repair coupling factor KHQ88_00205 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_00205 IPR037235 TRCF-like, C-terminal domain KHQ88_00205 IPR005118 Transcription-repair-coupling factor, C-terminal domain KHQ88_00205 IPR041471 UvrB, interaction domain KHQ88_00210 IPR020904 Short-chain dehydrogenase/reductase, conserved site KHQ88_00210 IPR002347 Short-chain dehydrogenase/reductase SDR KHQ88_00210 IPR036291 NAD(P)-binding domain superfamily KHQ88_00220 IPR012792 3-oxoacid CoA-transferase, subunit A KHQ88_00220 IPR004165 Coenzyme A transferase family I KHQ88_00220 IPR004163 Coenzyme A transferase binding site KHQ88_00220 IPR037171 NagB/RpiA transferase-like KHQ88_00225 IPR012791 3-oxoacid CoA-transferase, subunit B KHQ88_00225 IPR004165 Coenzyme A transferase family I KHQ88_00225 IPR004164 Coenzyme A transferase active site KHQ88_00225 IPR037171 NagB/RpiA transferase-like KHQ88_00230 IPR029069 HotDog domain superfamily KHQ88_00230 IPR006683 Thioesterase domain KHQ88_00235 IPR013785 Aldolase-type TIM barrel KHQ88_00235 IPR008567 3-keto-5-aminohexanoate cleavage enzyme KHQ88_00240 IPR036291 NAD(P)-binding domain superfamily KHQ88_00245 IPR007197 Radical SAM KHQ88_00245 IPR022459 Lysine-2,3-aminomutase KHQ88_00245 IPR013785 Aldolase-type TIM barrel KHQ88_00245 IPR025895 Lysine-2,3-aminomutase, C-terminal domain KHQ88_00245 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase KHQ88_00255 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic KHQ88_00255 IPR015130 D-Lysine 5,6-aminomutase alpha subunit KHQ88_00255 IPR037086 D-Lysine 5,6-aminomutase alpha subunit superfamily KHQ88_00260 IPR006158 Cobalamin (vitamin B12)-binding domain KHQ88_00260 IPR036724 Cobalamin-binding domain superfamily KHQ88_00260 IPR028991 D-lysine 5,6-aminomutase beta subunit KamE, N-terminal KHQ88_00260 IPR036843 D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain superfamily KHQ88_00265 IPR016030 Cobalamin adenosyltransferase-like KHQ88_00265 IPR036451 Cobalamin adenosyltransferase-like superfamily KHQ88_00265 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KHQ88_00270 IPR006394 Glutamate mutase sigma subunit KHQ88_00270 IPR036724 Cobalamin-binding domain superfamily KHQ88_00270 IPR006159 Methylmalonyl-CoA mutase, C-terminal KHQ88_00270 IPR006158 Cobalamin (vitamin B12)-binding domain KHQ88_00275 IPR006230 Protein MutL KHQ88_00280 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic KHQ88_00280 IPR006396 Glutamate mutase epsilon subunit KHQ88_00280 IPR014714 Glutamate mutase E subunit, C-terminal domain superfamily KHQ88_00285 IPR022662 Methylaspartate ammonia-lyase, C-terminal KHQ88_00285 IPR036849 Enolase-like, C-terminal domain superfamily KHQ88_00285 IPR029017 Enolase-like, N-terminal KHQ88_00285 IPR006395 Methylaspartate ammonia-lyase KHQ88_00285 IPR022665 Methylaspartate ammonia-lyase, N-terminal KHQ88_00290 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein KHQ88_00290 IPR006495 Citrate lyase acyl carrier protein CitD KHQ88_00295 IPR005000 HpcH/HpaI aldolase/citrate lyase domain KHQ88_00295 IPR011206 Citrate lyase beta subunit-like KHQ88_00295 IPR006475 Citrate lyase, beta subunit, bacteria KHQ88_00295 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily KHQ88_00295 IPR040442 Pyruvate kinase-like domain superfamily KHQ88_00300 IPR006472 Citrate lyase, alpha subunit KHQ88_00300 IPR037171 NagB/RpiA transferase-like KHQ88_00305 IPR002736 Triphosphoribosyl-dephospho-CoA protein KHQ88_00305 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase KHQ88_00305 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG KHQ88_00320 IPR002528 Multi antimicrobial extrusion protein KHQ88_00350 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family KHQ88_00370 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KHQ88_00370 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain KHQ88_00370 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily KHQ88_00370 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain KHQ88_00370 IPR022878 V-type ATP synthase catalytic alpha chain KHQ88_00370 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KHQ88_00370 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension KHQ88_00370 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_00370 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site KHQ88_00375 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site KHQ88_00375 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain KHQ88_00375 IPR022879 V-type ATP synthase regulatory subunit B/beta KHQ88_00375 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_00375 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain KHQ88_00380 IPR002699 ATPase, V1 complex, subunit D KHQ88_00390 IPR016181 Acyl-CoA N-acyltransferase KHQ88_00390 IPR000182 GNAT domain KHQ88_00390 IPR039143 Glucosamine 6-phosphate N-acetyltransferase KHQ88_00415 IPR030395 Glycerophosphodiester phosphodiesterase domain KHQ88_00415 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily KHQ88_00425 IPR035647 EF-G domain III/V-like KHQ88_00425 IPR000795 Transcription factor, GTP-binding domain KHQ88_00425 IPR005225 Small GTP-binding protein domain KHQ88_00425 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup KHQ88_00425 IPR020568 Ribosomal protein S5 domain 2-type fold KHQ88_00425 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_00425 IPR031157 Tr-type G domain, conserved site KHQ88_00425 IPR004161 Translation elongation factor EFTu-like, domain 2 KHQ88_00425 IPR004540 Translation elongation factor EFG/EF2 KHQ88_00425 IPR035649 EFG, domain V KHQ88_00425 IPR009000 Translation protein, beta-barrel domain superfamily KHQ88_00425 IPR009022 Elongation factor G, domain III KHQ88_00425 IPR041095 Elongation Factor G, domain II KHQ88_00425 IPR005517 Translation elongation factor EFG/EF2, domain IV KHQ88_00425 IPR000640 Elongation factor EFG, domain V-like KHQ88_00430 IPR003797 DegV KHQ88_00460 IPR002696 Putative membrane protein insertion efficiency factor KHQ88_00465 IPR007346 Endonuclease I KHQ88_00470 IPR028082 Periplasmic binding protein-like I KHQ88_00470 IPR003760 ABC transporter substrate-binding protein PnrA-like KHQ88_00475 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_00475 IPR003439 ABC transporter-like KHQ88_00475 IPR003593 AAA+ ATPase domain KHQ88_00475 IPR017871 ABC transporter, conserved site KHQ88_00480 IPR002229 Blood group Rhesus C/E/D polypeptide KHQ88_00480 IPR001851 ABC transporter, permease KHQ88_00485 IPR001851 ABC transporter, permease KHQ88_00490 IPR003356 DNA methylase, adenine-specific KHQ88_00490 IPR016843 S-adenosyl-L-methionine dependent adenine methyltransferase, bacteria, predicted KHQ88_00490 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase KHQ88_00495 IPR023042 Peptidase M17, leucine aminopeptidase KHQ88_00495 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B KHQ88_00495 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal KHQ88_00495 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal KHQ88_00500 IPR004372 Acetate/propionate kinase KHQ88_00500 IPR000890 Aliphatic acid kinase, short-chain KHQ88_00500 IPR023865 Aliphatic acid kinase, short-chain, conserved site KHQ88_00515 IPR004013 PHP domain KHQ88_00515 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type KHQ88_00515 IPR029460 DNA polymerase, helix-hairpin-helix motif KHQ88_00515 IPR040982 DNA polymerase III alpha subunit finger domain KHQ88_00515 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain KHQ88_00515 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain KHQ88_00515 IPR004805 DNA polymerase III, alpha subunit KHQ88_00515 IPR003141 Polymerase/histidinol phosphatase, N-terminal KHQ88_00515 IPR016195 Polymerase/histidinol phosphatase-like KHQ88_00520 IPR022953 ATP-dependent 6-phosphofructokinase KHQ88_00520 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type KHQ88_00520 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic KHQ88_00520 IPR000023 Phosphofructokinase domain KHQ88_00520 IPR035966 Phosphofructokinase superfamily KHQ88_00520 IPR015912 Phosphofructokinase, conserved site KHQ88_00525 IPR023404 Radical SAM, alpha/beta horseshoe KHQ88_00525 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN KHQ88_00525 IPR034505 Anaerobic coproporphyrinogen-III oxidase KHQ88_00525 IPR006638 Elp3/MiaB/NifB KHQ88_00525 IPR010723 HemN, C-terminal KHQ88_00525 IPR007197 Radical SAM KHQ88_00530 IPR024759 UvrB, YAD/RRR-motif-containing domain KHQ88_00530 IPR041471 UvrB, interaction domain KHQ88_00530 IPR004807 UvrABC system, subunit B KHQ88_00530 IPR036876 UVR domain superfamily KHQ88_00530 IPR001943 UVR domain KHQ88_00530 IPR006935 Helicase/UvrB, N-terminal KHQ88_00530 IPR014001 Helicase superfamily 1/2, ATP-binding domain KHQ88_00530 IPR001650 Helicase, C-terminal KHQ88_00530 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_00550 IPR030390 RNA methyltransferase TrmA, active site KHQ88_00550 IPR002792 TRAM domain KHQ88_00550 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase KHQ88_00550 IPR010280 (Uracil-5)-methyltransferase family KHQ88_00550 IPR030391 RNA methyltransferase TrmA, conserved site KHQ88_00550 IPR012340 Nucleic acid-binding, OB-fold KHQ88_00560 IPR038770 Sodium/solute symporter superfamily KHQ88_00560 IPR006153 Cation/H+ exchanger KHQ88_00580 IPR004007 DhaL domain KHQ88_00580 IPR019986 DAK2 domain-containing protein YloV KHQ88_00580 IPR036117 DhaL domain superfamily KHQ88_00580 IPR033470 Uncharacterised protein, DhaK domain KHQ88_00600 IPR015424 Pyridoxal phosphate-dependent transferase KHQ88_00600 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 KHQ88_00600 IPR015421 Pyridoxal phosphate-dependent transferase, major domain KHQ88_00600 IPR013440 Tryptophanase KHQ88_00600 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase KHQ88_00600 IPR018176 Tryptophanase, conserved site KHQ88_00600 IPR011166 Beta-eliminating lyase family KHQ88_00605 IPR003876 Arginine deiminase KHQ88_00650 IPR004462 Desulforodoxin domain KHQ88_00650 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain KHQ88_00650 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily KHQ88_00650 IPR004793 Desulfoferrodoxin KHQ88_00650 IPR038094 Desulforodoxin domain superfamily KHQ88_00655 IPR003824 Undecaprenyl-diphosphatase UppP KHQ88_00660 IPR003824 Undecaprenyl-diphosphatase UppP KHQ88_00670 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_00670 IPR005702 Exopolysaccharide synthesis protein KHQ88_00670 IPR025669 AAA domain KHQ88_00680 IPR001789 Signal transduction response regulator, receiver domain KHQ88_00680 IPR001867 OmpR/PhoB-type DNA-binding domain KHQ88_00680 IPR011006 CheY-like superfamily KHQ88_00680 IPR039420 Transcriptional regulatory protein WalR-like KHQ88_00680 IPR036388 Winged helix-like DNA-binding domain superfamily KHQ88_00685 IPR003594 Histidine kinase/HSP90-like ATPase KHQ88_00685 IPR005467 Histidine kinase domain KHQ88_00685 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain KHQ88_00685 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily KHQ88_00685 IPR004358 Signal transduction histidine kinase-related protein, C-terminal KHQ88_00685 IPR003660 HAMP domain KHQ88_00685 IPR036890 Histidine kinase/HSP90-like ATPase superfamily KHQ88_00690 IPR036291 NAD(P)-binding domain superfamily KHQ88_00690 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain KHQ88_00690 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase KHQ88_00695 IPR030390 RNA methyltransferase TrmA, active site KHQ88_00695 IPR010280 (Uracil-5)-methyltransferase family KHQ88_00695 IPR002792 TRAM domain KHQ88_00695 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase KHQ88_00695 IPR030391 RNA methyltransferase TrmA, conserved site KHQ88_00695 IPR012340 Nucleic acid-binding, OB-fold KHQ88_00700 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site KHQ88_00700 IPR000559 Formate-tetrahydrofolate ligase, FTHFS KHQ88_00700 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_00715 IPR002528 Multi antimicrobial extrusion protein KHQ88_00720 IPR029058 Alpha/Beta hydrolase fold KHQ88_00720 IPR022742 Serine aminopeptidase, S33 KHQ88_00730 IPR041069 FeoB, cytosolic helical domain KHQ88_00730 IPR011640 Ferrous iron transport protein B, C-terminal KHQ88_00730 IPR003373 Ferrous iron transport protein B KHQ88_00730 IPR030389 FeoB-type guanine nucleotide-binding (G) domain KHQ88_00730 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_00730 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain KHQ88_00740 IPR017853 Glycoside hydrolase superfamily KHQ88_00740 IPR013780 Glycosyl hydrolase, all-beta KHQ88_00740 IPR006047 Glycosyl hydrolase, family 13, catalytic domain KHQ88_00745 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO KHQ88_00745 IPR020595 MnmG-related, conserved site KHQ88_00745 IPR036188 FAD/NAD(P)-binding domain superfamily KHQ88_00745 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related KHQ88_00750 IPR011931 Tyrosine recombinase XerC KHQ88_00750 IPR011932 Tyrosine recombinase XerD KHQ88_00750 IPR023009 Tyrosine recombinase XerC/XerD KHQ88_00750 IPR004107 Integrase, SAM-like, N-terminal KHQ88_00750 IPR011010 DNA breaking-rejoining enzyme, catalytic core KHQ88_00750 IPR013762 Integrase-like, catalytic domain superfamily KHQ88_00750 IPR002104 Integrase, catalytic domain KHQ88_00750 IPR010998 Integrase/recombinase, N-terminal KHQ88_00755 IPR003742 RNA methyltransferase RlmH KHQ88_00755 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal KHQ88_00755 IPR029028 Alpha/beta knot methyltransferases KHQ88_00765 IPR023214 HAD superfamily KHQ88_00765 IPR001757 P-type ATPase KHQ88_00765 IPR023299 P-type ATPase, cytoplasmic domain N KHQ88_00765 IPR018303 P-type ATPase, phosphorylation site KHQ88_00765 IPR023298 P-type ATPase, transmembrane domain superfamily KHQ88_00765 IPR008250 P-type ATPase, A domain superfamily KHQ88_00765 IPR036412 HAD-like superfamily KHQ88_00765 IPR027256 P-type ATPase, subfamily IB KHQ88_00805 IPR008201 Protein of unknown function DUF86 KHQ88_00810 IPR036812 NADP-dependent oxidoreductase domain superfamily KHQ88_00810 IPR023210 NADP-dependent oxidoreductase domain KHQ88_00810 IPR018170 Aldo/keto reductase, conserved site KHQ88_00810 IPR020471 Aldo/keto reductase KHQ88_00840 IPR008753 Peptidase M13, N-terminal domain KHQ88_00840 IPR042089 Peptidase M13, domain 2 KHQ88_00840 IPR018497 Peptidase M13, C-terminal domain KHQ88_00840 IPR000718 Peptidase M13 KHQ88_00840 IPR024079 Metallopeptidase, catalytic domain superfamily KHQ88_00845 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site KHQ88_00845 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain KHQ88_00845 IPR036452 Ribonucleoside hydrolase-like KHQ88_00845 IPR023186 Inosine/uridine-preferring nucleoside hydrolase KHQ88_00845 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA KHQ88_00855 IPR036291 NAD(P)-binding domain superfamily KHQ88_00855 IPR002347 Short-chain dehydrogenase/reductase SDR KHQ88_00855 IPR005979 Light-dependent protochlorophyllide reductase KHQ88_00865 IPR023353 LemA-like domain superfamily KHQ88_00865 IPR007156 LemA KHQ88_00880 IPR001320 Ionotropic glutamate receptor KHQ88_00880 IPR018313 Solute-binding protein family 3, conserved site KHQ88_00880 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF KHQ88_00885 IPR003593 AAA+ ATPase domain KHQ88_00885 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_00885 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type KHQ88_00885 IPR017871 ABC transporter, conserved site KHQ88_00885 IPR003439 ABC transporter-like KHQ88_00900 IPR010982 Lambda repressor-like, DNA-binding domain superfamily KHQ88_00900 IPR001387 Cro/C1-type helix-turn-helix domain KHQ88_00905 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily KHQ88_00905 IPR005145 Putative GTP-binding controlling metal-binding domain KHQ88_00905 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily KHQ88_00905 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 KHQ88_00905 IPR006070 YrdC-like domain KHQ88_00910 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site KHQ88_00910 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain KHQ88_00910 IPR029000 Cyclophilin-like domain superfamily KHQ88_00920 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_00920 IPR003439 ABC transporter-like KHQ88_00920 IPR003593 AAA+ ATPase domain KHQ88_00920 IPR032781 ABC-transporter extension domain KHQ88_00930 IPR017938 Riboflavin synthase-like beta-barrel KHQ88_00930 IPR001433 Oxidoreductase FAD/NAD(P)-binding KHQ88_00930 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F KHQ88_00930 IPR017927 FAD-binding domain, ferredoxin reductase-type KHQ88_00930 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain KHQ88_00930 IPR012675 Beta-grasp domain superfamily KHQ88_00930 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain KHQ88_00930 IPR036010 2Fe-2S ferredoxin-like superfamily KHQ88_00930 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain KHQ88_00935 IPR003667 NqrDE/RnfAE KHQ88_00935 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E KHQ88_00940 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D KHQ88_00940 IPR003667 NqrDE/RnfAE KHQ88_00950 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B KHQ88_00950 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD KHQ88_00955 IPR006286 Deglycase PfpI KHQ88_00955 IPR029062 Class I glutamine amidotransferase-like KHQ88_00955 IPR002818 DJ-1/PfpI KHQ88_01010 IPR006076 FAD dependent oxidoreductase KHQ88_01010 IPR036188 FAD/NAD(P)-binding domain superfamily KHQ88_01015 IPR042204 2Fe-2S iron-sulfur cluster binding domain, N-terminal KHQ88_01015 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily KHQ88_01015 IPR036188 FAD/NAD(P)-binding domain superfamily KHQ88_01015 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal KHQ88_01015 IPR006222 Aminomethyltransferase, folate-binding domain KHQ88_01015 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 KHQ88_01015 IPR041117 SoxA, A3 domain KHQ88_01015 IPR006277 Sarcosine oxidase, alpha subunit KHQ88_01015 IPR023753 FAD/NAD(P)-binding domain KHQ88_01015 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KHQ88_01025 IPR005999 Glycerol kinase KHQ88_01025 IPR018484 Carbohydrate kinase, FGGY, N-terminal KHQ88_01025 IPR018483 Carbohydrate kinase, FGGY, conserved site KHQ88_01025 IPR018485 Carbohydrate kinase, FGGY, C-terminal KHQ88_01025 IPR000577 Carbohydrate kinase, FGGY KHQ88_01045 IPR000182 GNAT domain KHQ88_01045 IPR016181 Acyl-CoA N-acyltransferase KHQ88_01050 IPR002549 Transmembrane protein TqsA-like KHQ88_01070 IPR042109 Adenylosuccinate synthetase, domain 1 KHQ88_01070 IPR018220 Adenylosuccinate synthase, GTP-binding site KHQ88_01070 IPR033128 Adenylosuccinate synthase, active site KHQ88_01070 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_01070 IPR001114 Adenylosuccinate synthetase KHQ88_01070 IPR042111 Adenylosuccinate synthetase, domain 3 KHQ88_01070 IPR042110 Adenylosuccinate synthetase, domain 2 KHQ88_01075 IPR004769 Adenylosuccinate lyase KHQ88_01075 IPR020557 Fumarate lyase, conserved site KHQ88_01075 IPR024083 Fumarase/histidase, N-terminal KHQ88_01075 IPR008948 L-Aspartase-like KHQ88_01075 IPR022761 Fumarate lyase, N-terminal KHQ88_01075 IPR000362 Fumarate lyase family KHQ88_01075 IPR019468 Adenylosuccinate lyase C-terminal KHQ88_01080 IPR019734 Tetratricopeptide repeat KHQ88_01080 IPR011990 Tetratricopeptide-like helical domain superfamily KHQ88_01080 IPR013026 Tetratricopeptide repeat-containing domain KHQ88_01080 IPR035952 Rhomboid-like superfamily KHQ88_01080 IPR022764 Peptidase S54, rhomboid domain KHQ88_01090 IPR004381 Glycerate kinase KHQ88_01090 IPR036129 Glycerate kinase superfamily KHQ88_01090 IPR018193 Glycerate kinase, flavodoxin-like fold KHQ88_01090 IPR018197 Glycerate kinase, restriction-enzyme-like fold KHQ88_01100 IPR000209 Peptidase S8/S53 domain KHQ88_01100 IPR036852 Peptidase S8/S53 domain superfamily KHQ88_01100 IPR023827 Peptidase S8, subtilisin, Asp-active site KHQ88_01100 IPR022398 Peptidase S8, subtilisin, His-active site KHQ88_01100 IPR023828 Peptidase S8, subtilisin, Ser-active site KHQ88_01100 IPR015500 Peptidase S8, subtilisin-related KHQ88_01100 IPR034202 Subtilisin Carlsberg-like catalytic domain KHQ88_01115 IPR018043 Sodium:galactoside symporter, conserved site KHQ88_01115 IPR001927 Sodium:galactoside symporter KHQ88_01115 IPR039672 Lactose permease-like KHQ88_01115 IPR036259 MFS transporter superfamily KHQ88_01120 IPR026891 Fibronectin type III-like domain KHQ88_01120 IPR019800 Glycoside hydrolase, family 3, active site KHQ88_01120 IPR013783 Immunoglobulin-like fold KHQ88_01120 IPR017853 Glycoside hydrolase superfamily KHQ88_01120 IPR001764 Glycoside hydrolase, family 3, N-terminal KHQ88_01120 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily KHQ88_01120 IPR002772 Glycoside hydrolase family 3 C-terminal domain KHQ88_01120 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily KHQ88_01135 IPR023358 Peptidase M18, domain 2 KHQ88_01135 IPR001948 Peptidase M18 KHQ88_01135 IPR022983 M18 family aminopeptidase 1, putative KHQ88_01150 IPR038062 ScdA-like, N-terminal domain superfamily KHQ88_01150 IPR023551 Iron-sulfur cluster repair protein ScdA KHQ88_01150 IPR019903 Repair of iron centres family KHQ88_01150 IPR012312 Haemerythrin-like KHQ88_01240 IPR014001 Helicase superfamily 1/2, ATP-binding domain KHQ88_01240 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_01240 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal KHQ88_01240 IPR004473 Restriction endonuclease, type I, HsdR KHQ88_01240 IPR040980 SWI2/SNF2 ATPase KHQ88_01240 IPR021810 Protein of unknown function DUF3387 KHQ88_01275 IPR001633 EAL domain KHQ88_01275 IPR035919 EAL domain superfamily KHQ88_01275 IPR029787 Nucleotide cyclase KHQ88_01275 IPR005330 MHYT domain KHQ88_01275 IPR000160 GGDEF domain KHQ88_01285 IPR011545 DEAD/DEAH box helicase domain KHQ88_01285 IPR030880 DEAD-box ATP-dependent RNA helicase CshA KHQ88_01285 IPR014001 Helicase superfamily 1/2, ATP-binding domain KHQ88_01285 IPR001650 Helicase, C-terminal KHQ88_01285 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_01285 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site KHQ88_01285 IPR014014 RNA helicase, DEAD-box type, Q motif KHQ88_01300 IPR000160 GGDEF domain KHQ88_01300 IPR003607 HD/PDEase domain KHQ88_01300 IPR037522 HD-GYP domain KHQ88_01300 IPR029787 Nucleotide cyclase KHQ88_01300 IPR006674 HD domain KHQ88_01315 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site KHQ88_01315 IPR029056 Ribokinase-like KHQ88_01315 IPR011611 Carbohydrate kinase PfkB KHQ88_01320 IPR022830 Indigoidine synthase A-like KHQ88_01320 IPR007342 Pseudouridine-5'-phosphate glycosidase KHQ88_01330 IPR012156 Cold shock, CspA KHQ88_01330 IPR011129 Cold shock domain KHQ88_01330 IPR019844 Cold-shock (CSD) domain KHQ88_01330 IPR002059 Cold-shock protein, DNA-binding KHQ88_01330 IPR012340 Nucleic acid-binding, OB-fold KHQ88_01340 IPR011607 Methylglyoxal synthase-like domain KHQ88_01340 IPR004363 Methylglyoxal synthase KHQ88_01340 IPR018148 Methylglyoxal synthase, active site KHQ88_01340 IPR036914 Methylglyoxal synthase-like domain superfamily KHQ88_01345 IPR002139 Ribokinase/fructokinase KHQ88_01345 IPR011611 Carbohydrate kinase PfkB KHQ88_01345 IPR011877 Ribokinase KHQ88_01345 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site KHQ88_01345 IPR029056 Ribokinase-like KHQ88_01350 IPR023186 Inosine/uridine-preferring nucleoside hydrolase KHQ88_01350 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site KHQ88_01350 IPR022977 Pyrimidine-specific ribonucleoside hydrolase RihB KHQ88_01350 IPR036452 Ribonucleoside hydrolase-like KHQ88_01350 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain KHQ88_01360 IPR004839 Aminotransferase, class I/classII KHQ88_01360 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site KHQ88_01360 IPR015421 Pyridoxal phosphate-dependent transferase, major domain KHQ88_01360 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 KHQ88_01360 IPR015424 Pyridoxal phosphate-dependent transferase KHQ88_01370 IPR029000 Cyclophilin-like domain superfamily KHQ88_01370 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain KHQ88_01370 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site KHQ88_01370 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase KHQ88_01380 IPR036412 HAD-like superfamily KHQ88_01380 IPR018303 P-type ATPase, phosphorylation site KHQ88_01380 IPR023298 P-type ATPase, transmembrane domain superfamily KHQ88_01380 IPR008250 P-type ATPase, A domain superfamily KHQ88_01380 IPR023299 P-type ATPase, cytoplasmic domain N KHQ88_01380 IPR023214 HAD superfamily KHQ88_01380 IPR006122 Heavy metal-associated domain, copper ion-binding KHQ88_01380 IPR036163 Heavy metal-associated domain superfamily KHQ88_01380 IPR027256 P-type ATPase, subfamily IB KHQ88_01380 IPR001757 P-type ATPase KHQ88_01380 IPR017969 Heavy-metal-associated, conserved site KHQ88_01380 IPR006121 Heavy metal-associated domain, HMA KHQ88_01395 IPR009057 Homeobox-like domain superfamily KHQ88_01395 IPR001647 DNA-binding HTH domain, TetR-type KHQ88_01395 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily KHQ88_01395 IPR013570 Transcription regulator YsiA, C-terminal KHQ88_01410 IPR006183 6-phosphogluconate dehydrogenase KHQ88_01410 IPR036291 NAD(P)-binding domain superfamily KHQ88_01410 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding KHQ88_01410 IPR013328 6-phosphogluconate dehydrogenase, domain 2 KHQ88_01410 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type KHQ88_01410 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily KHQ88_01410 IPR006114 6-phosphogluconate dehydrogenase, C-terminal KHQ88_01410 IPR006184 6-phosphogluconate-binding site KHQ88_01415 IPR001282 Glucose-6-phosphate dehydrogenase KHQ88_01415 IPR019796 Glucose-6-phosphate dehydrogenase, active site KHQ88_01415 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal KHQ88_01415 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding KHQ88_01415 IPR036291 NAD(P)-binding domain superfamily KHQ88_01420 IPR007325 Kynurenine formamidase/cyclase-like KHQ88_01420 IPR037175 Kynurenine formamidase superfamily KHQ88_01420 IPR017484 Kynurenine formamidase, bacteria KHQ88_01425 IPR013785 Aldolase-type TIM barrel KHQ88_01425 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal KHQ88_01430 IPR003719 Phenazine biosynthesis PhzF protein KHQ88_01435 IPR030395 Glycerophosphodiester phosphodiesterase domain KHQ88_01435 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily KHQ88_01445 IPR007530 Aminoglycoside 6-adenylyltransferase KHQ88_01450 IPR023772 DNA-binding HTH domain, TetR-type, conserved site KHQ88_01450 IPR009057 Homeobox-like domain superfamily KHQ88_01450 IPR001647 DNA-binding HTH domain, TetR-type KHQ88_01465 IPR011042 Six-bladed beta-propeller, TolB-like KHQ88_01465 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain KHQ88_01465 IPR011659 WD40-like Beta Propeller KHQ88_01465 IPR029058 Alpha/Beta hydrolase fold KHQ88_01480 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_01480 IPR003593 AAA+ ATPase domain KHQ88_01480 IPR003439 ABC transporter-like KHQ88_01480 IPR017871 ABC transporter, conserved site KHQ88_01480 IPR025302 Domain of unknown function DUF4162 KHQ88_01490 IPR035651 BipA, domain V KHQ88_01490 IPR035647 EF-G domain III/V-like KHQ88_01490 IPR000640 Elongation factor EFG, domain V-like KHQ88_01490 IPR004161 Translation elongation factor EFTu-like, domain 2 KHQ88_01490 IPR042116 GTP-binding protein TypA/BipA, C-terminal KHQ88_01490 IPR005225 Small GTP-binding protein domain KHQ88_01490 IPR031157 Tr-type G domain, conserved site KHQ88_01490 IPR006298 GTP-binding protein TypA KHQ88_01490 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_01490 IPR000795 Transcription factor, GTP-binding domain KHQ88_01490 IPR009000 Translation protein, beta-barrel domain superfamily KHQ88_01500 IPR035569 Antitoxin epsilon/PezA domain superfamily KHQ88_01500 IPR001387 Cro/C1-type helix-turn-helix domain KHQ88_01500 IPR010982 Lambda repressor-like, DNA-binding domain superfamily KHQ88_01515 IPR011528 Nuclease-related domain, NERD KHQ88_01520 IPR002539 MaoC-like dehydratase domain KHQ88_01520 IPR029069 HotDog domain superfamily KHQ88_01525 IPR006089 Acyl-CoA dehydrogenase, conserved site KHQ88_01525 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain KHQ88_01525 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal KHQ88_01525 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal KHQ88_01525 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily KHQ88_01525 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily KHQ88_01525 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal KHQ88_01530 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold KHQ88_01530 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal KHQ88_01530 IPR012255 Electron transfer flavoprotein, beta subunit KHQ88_01530 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal KHQ88_01530 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site KHQ88_01535 IPR029035 DHS-like NAD/FAD-binding domain superfamily KHQ88_01535 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal KHQ88_01535 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal KHQ88_01535 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site KHQ88_01535 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold KHQ88_01535 IPR001308 Electron transfer flavoprotein alpha subunit/FixB KHQ88_01535 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal KHQ88_01540 IPR023166 HI0933-like insert domain superfamily KHQ88_01540 IPR036188 FAD/NAD(P)-binding domain superfamily KHQ88_01540 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like KHQ88_01545 IPR036388 Winged helix-like DNA-binding domain superfamily KHQ88_01545 IPR036390 Winged helix DNA-binding domain superfamily KHQ88_01545 IPR000847 Transcription regulator HTH, LysR KHQ88_01545 IPR005119 LysR, substrate-binding KHQ88_01550 IPR036390 Winged helix DNA-binding domain superfamily KHQ88_01550 IPR009718 Rex DNA-binding, C-terminal domain KHQ88_01550 IPR036291 NAD(P)-binding domain superfamily KHQ88_01550 IPR003781 CoA-binding KHQ88_01550 IPR022876 Redox-sensing transcriptional repressor Rex KHQ88_01550 IPR036388 Winged helix-like DNA-binding domain superfamily KHQ88_01560 IPR036249 Thioredoxin-like superfamily KHQ88_01585 IPR000515 ABC transporter type 1, transmembrane domain MetI-like KHQ88_01585 IPR035906 MetI-like superfamily KHQ88_01595 IPR029009 Allosteric substrate binding domain superfamily KHQ88_01595 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form KHQ88_01595 IPR005130 Serine dehydratase-like, alpha subunit KHQ88_01595 IPR005131 Serine dehydratase beta chain KHQ88_01605 IPR036249 Thioredoxin-like superfamily KHQ88_01605 IPR002023 NADH-quinone oxidoreductase subunit E-like KHQ88_01605 IPR042128 NuoE domain KHQ88_01605 IPR028431 NADP-reducing hydrogenase subunit HndA KHQ88_01605 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal KHQ88_01610 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain KHQ88_01610 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site KHQ88_01610 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site KHQ88_01610 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain KHQ88_01610 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily KHQ88_01610 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain KHQ88_01610 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily KHQ88_01615 IPR036010 2Fe-2S ferredoxin-like superfamily KHQ88_01615 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain KHQ88_01615 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site KHQ88_01615 IPR009016 Iron hydrogenase KHQ88_01615 IPR004108 Iron hydrogenase, large subunit, C-terminal KHQ88_01615 IPR003149 Iron hydrogenase, small subunit KHQ88_01615 IPR036991 Iron hydrogenase, small subunit superfamily KHQ88_01615 IPR013352 Iron hydrogenase, subset KHQ88_01615 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding KHQ88_01615 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain KHQ88_01640 IPR005904 Hypoxanthine phosphoribosyl transferase KHQ88_01640 IPR000836 Phosphoribosyltransferase domain KHQ88_01640 IPR029057 Phosphoribosyltransferase-like KHQ88_01645 IPR033828 CTP synthase GATase domain KHQ88_01645 IPR017456 CTP synthase, N-terminal KHQ88_01645 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_01645 IPR029062 Class I glutamine amidotransferase-like KHQ88_01645 IPR017926 Glutamine amidotransferase KHQ88_01645 IPR004468 CTP synthase KHQ88_01665 IPR003593 AAA+ ATPase domain KHQ88_01665 IPR003439 ABC transporter-like KHQ88_01665 IPR017871 ABC transporter, conserved site KHQ88_01665 IPR015854 ABC transporter, lipoprotein release, LolD KHQ88_01665 IPR011924 Lipoprotein releasing system, ATP-binding protein KHQ88_01665 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_01700 IPR003735 Metal-sensitive transcriptional repressor KHQ88_01700 IPR038390 Metal-sensitive transcriptional repressor superfamily KHQ88_01705 IPR036249 Thioredoxin-like superfamily KHQ88_01705 IPR036188 FAD/NAD(P)-binding domain superfamily KHQ88_01705 IPR023753 FAD/NAD(P)-binding domain KHQ88_01705 IPR002109 Glutaredoxin KHQ88_01705 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site KHQ88_01705 IPR012336 Thioredoxin-like fold KHQ88_01705 IPR012081 Alkyl hydroperoxide reductase subunit F KHQ88_01710 IPR012081 Alkyl hydroperoxide reductase subunit F KHQ88_01710 IPR036188 FAD/NAD(P)-binding domain superfamily KHQ88_01710 IPR002109 Glutaredoxin KHQ88_01710 IPR023753 FAD/NAD(P)-binding domain KHQ88_01710 IPR012336 Thioredoxin-like fold KHQ88_01710 IPR036249 Thioredoxin-like superfamily KHQ88_01710 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site KHQ88_01715 IPR036291 NAD(P)-binding domain superfamily KHQ88_01715 IPR001236 Lactate/malate dehydrogenase, N-terminal KHQ88_01715 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal KHQ88_01715 IPR018177 L-lactate dehydrogenase, active site KHQ88_01715 IPR011304 L-lactate dehydrogenase KHQ88_01715 IPR001557 L-lactate/malate dehydrogenase KHQ88_01715 IPR022383 Lactate/malate dehydrogenase, C-terminal KHQ88_01720 IPR001602 Uncharacterised protein family UPF0047 KHQ88_01720 IPR035917 YjbQ-like superfamily KHQ88_01740 IPR019219 Protein of unknown function DUF2130 KHQ88_01740 IPR019219 Protein of unknown function DUF2130 KHQ88_01745 IPR006675 HDIG domain KHQ88_01745 IPR037522 HD-GYP domain KHQ88_01745 IPR003607 HD/PDEase domain KHQ88_01745 IPR006674 HD domain KHQ88_01745 IPR021812 Protein of unknown function DUF3391 KHQ88_01755 IPR005760 A/G-specific adenine glycosylase MutY KHQ88_01755 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif KHQ88_01755 IPR003265 HhH-GPD domain KHQ88_01755 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal KHQ88_01755 IPR029119 MutY, C-terminal KHQ88_01755 IPR015797 NUDIX hydrolase-like domain superfamily KHQ88_01755 IPR011257 DNA glycosylase KHQ88_01760 IPR018723 Protein of unknown function DUF2254, membrane KHQ88_01775 IPR037523 Vicinal oxygen chelate (VOC) domain KHQ88_01775 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain KHQ88_01775 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase KHQ88_01785 IPR002925 Dienelactone hydrolase KHQ88_01785 IPR029058 Alpha/Beta hydrolase fold KHQ88_01795 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_01795 IPR003439 ABC transporter-like KHQ88_01795 IPR003593 AAA+ ATPase domain KHQ88_01795 IPR017871 ABC transporter, conserved site KHQ88_01805 IPR013785 Aldolase-type TIM barrel KHQ88_01805 IPR036188 FAD/NAD(P)-binding domain superfamily KHQ88_01805 IPR023753 FAD/NAD(P)-binding domain KHQ88_01805 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal KHQ88_01810 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal KHQ88_01810 IPR029751 Ribosomal protein L25 KHQ88_01810 IPR001021 Ribosomal protein L25, long-form KHQ88_01810 IPR037121 Ribosomal protein L25, C-terminal KHQ88_01810 IPR020057 Ribosomal protein L25, beta domain KHQ88_01810 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily KHQ88_01815 IPR039425 RNA polymerase sigma-70 like KHQ88_01815 IPR014284 RNA polymerase sigma-70 like domain KHQ88_01815 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site KHQ88_01815 IPR007627 RNA polymerase sigma-70 region 2 KHQ88_01815 IPR007630 RNA polymerase sigma-70 region 4 KHQ88_01815 IPR013325 RNA polymerase sigma factor, region 2 KHQ88_01815 IPR013324 RNA polymerase sigma factor, region 3/4-like KHQ88_01815 IPR036388 Winged helix-like DNA-binding domain superfamily KHQ88_01835 IPR007346 Endonuclease I KHQ88_01845 IPR000845 Nucleoside phosphorylase domain KHQ88_01845 IPR035994 Nucleoside phosphorylase superfamily KHQ88_01845 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific KHQ88_01845 IPR018099 Purine phosphorylase, family 2, conserved site KHQ88_01845 IPR011268 Purine nucleoside phosphorylase KHQ88_01850 IPR000787 Peptidase M29 KHQ88_01850 IPR035097 Peptidase M29, N-terminal KHQ88_01855 IPR003767 Malate/L-lactate dehydrogenase-like KHQ88_01855 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily KHQ88_01860 IPR028427 Peptide methionine sulfoxide reductase KHQ88_01860 IPR002579 Peptide methionine sulphoxide reductase MrsB KHQ88_01860 IPR011057 Mss4-like superfamily KHQ88_01875 IPR003679 Aminoglycoside N(3)-acetyltransferase KHQ88_01875 IPR028345 Aminoglycoside 3-N-acetyltransferase-like KHQ88_01880 IPR000101 Gamma-glutamyltranspeptidase KHQ88_01880 IPR029055 Nucleophile aminohydrolases, N-terminal KHQ88_01890 IPR036264 Bacterial exopeptidase dimerisation domain KHQ88_01890 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site KHQ88_01890 IPR002933 Peptidase M20 KHQ88_01890 IPR011650 Peptidase M20, dimerisation domain KHQ88_01890 IPR010161 Peptidase M20B, tripeptide aminopeptidase KHQ88_01895 IPR029058 Alpha/Beta hydrolase fold KHQ88_01895 IPR013094 Alpha/beta hydrolase fold-3 KHQ88_01910 IPR003445 Cation transporter KHQ88_01910 IPR004772 TrkH potassium transport family KHQ88_01915 IPR017665 Guanylate kinase KHQ88_01915 IPR008145 Guanylate kinase/L-type calcium channel beta subunit KHQ88_01915 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_01915 IPR020590 Guanylate kinase, conserved site KHQ88_01915 IPR008144 Guanylate kinase-like domain KHQ88_01925 IPR005746 Thioredoxin KHQ88_01925 IPR036249 Thioredoxin-like superfamily KHQ88_01925 IPR013766 Thioredoxin domain KHQ88_01925 IPR017937 Thioredoxin, conserved site KHQ88_01930 IPR005982 Thioredoxin reductase KHQ88_01930 IPR036188 FAD/NAD(P)-binding domain superfamily KHQ88_01930 IPR023753 FAD/NAD(P)-binding domain KHQ88_01930 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site KHQ88_01935 IPR036412 HAD-like superfamily KHQ88_01935 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like KHQ88_01935 IPR023214 HAD superfamily KHQ88_01940 IPR005925 Agmatinase-related KHQ88_01940 IPR006035 Ureohydrolase KHQ88_01940 IPR023696 Ureohydrolase domain superfamily KHQ88_01940 IPR020855 Ureohydrolase, manganese-binding site KHQ88_01945 IPR000310 Orn/Lys/Arg decarboxylase, major domain KHQ88_01945 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily KHQ88_01945 IPR015424 Pyridoxal phosphate-dependent transferase KHQ88_01945 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 KHQ88_01945 IPR015421 Pyridoxal phosphate-dependent transferase, major domain KHQ88_01945 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal KHQ88_01955 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase KHQ88_01955 IPR015424 Pyridoxal phosphate-dependent transferase KHQ88_01955 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 KHQ88_01955 IPR015421 Pyridoxal phosphate-dependent transferase, major domain KHQ88_01955 IPR023603 Threonine aldolase KHQ88_01960 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain KHQ88_01960 IPR009051 Alpha-helical ferredoxin KHQ88_01960 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC KHQ88_01960 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain KHQ88_01960 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily KHQ88_01960 IPR026902 RnfC Barrel sandwich hybrid domain KHQ88_01960 IPR019554 Soluble ligand binding domain KHQ88_01960 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site KHQ88_01965 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD KHQ88_01965 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D KHQ88_01980 IPR003667 NqrDE/RnfAE KHQ88_01980 IPR010968 Ion-translocating oxidoreductase complex subunit E KHQ88_01985 IPR003667 NqrDE/RnfAE KHQ88_01985 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA KHQ88_02000 IPR001106 Aromatic amino acid lyase KHQ88_02000 IPR005921 Histidine ammonia-lyase KHQ88_02000 IPR008948 L-Aspartase-like KHQ88_02000 IPR022313 Phenylalanine/histidine ammonia-lyases, active site KHQ88_02000 IPR024083 Fumarase/histidase, N-terminal KHQ88_02005 IPR023637 Urocanase KHQ88_02005 IPR035401 Urocanase, C-terminal domain KHQ88_02005 IPR023636 Urocanase conserved site KHQ88_02005 IPR035400 Urocanase, N-terminal domain KHQ88_02005 IPR035085 Urocanase, Rossmann-like domain KHQ88_02005 IPR036190 Urocanase superfamily KHQ88_02005 IPR038364 Urocanase, central domain superfamily KHQ88_02010 IPR013802 Formiminotransferase, C-terminal subdomain KHQ88_02010 IPR004227 Formiminotransferase catalytic domain KHQ88_02010 IPR012886 Formiminotransferase, N-terminal subdomain KHQ88_02010 IPR037064 Formiminotransferase, N-terminal subdomain superfamily KHQ88_02010 IPR022384 Formiminotransferase catalytic domain superfamily KHQ88_02010 IPR037070 Formiminotransferase, C-terminal subdomain superfamily KHQ88_02015 IPR006680 Amidohydrolase-related KHQ88_02015 IPR005920 Imidazolonepropionase KHQ88_02015 IPR011059 Metal-dependent hydrolase, composite domain superfamily KHQ88_02015 IPR032466 Metal-dependent hydrolase KHQ88_02020 IPR007044 Cyclodeaminase/cyclohydrolase KHQ88_02020 IPR036178 Formimidoyltransferase-cyclodeaminase-like superfamily KHQ88_02025 IPR001585 Transaldolase/Fructose-6-phosphate aldolase KHQ88_02025 IPR022999 Transaldolase type 3B, putative KHQ88_02025 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase KHQ88_02025 IPR018225 Transaldolase, active site KHQ88_02025 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial KHQ88_02025 IPR013785 Aldolase-type TIM barrel KHQ88_02030 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains KHQ88_02030 IPR001036 Acriflavin resistance protein KHQ88_02040 IPR003593 AAA+ ATPase domain KHQ88_02040 IPR003838 ABC transporter permease protein domain KHQ88_02040 IPR003439 ABC transporter-like KHQ88_02040 IPR017911 ABC transporter, macrolide export, ATP-binding domain KHQ88_02040 IPR025857 MacB-like periplasmic core domain KHQ88_02040 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_02040 IPR017871 ABC transporter, conserved site KHQ88_02045 IPR015421 Pyridoxal phosphate-dependent transferase, major domain KHQ88_02045 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 KHQ88_02045 IPR004839 Aminotransferase, class I/classII KHQ88_02045 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type KHQ88_02045 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site KHQ88_02045 IPR015424 Pyridoxal phosphate-dependent transferase KHQ88_02050 IPR036291 NAD(P)-binding domain superfamily KHQ88_02050 IPR020904 Short-chain dehydrogenase/reductase, conserved site KHQ88_02050 IPR002347 Short-chain dehydrogenase/reductase SDR KHQ88_02055 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site KHQ88_02055 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain KHQ88_02055 IPR036291 NAD(P)-binding domain superfamily KHQ88_02100 IPR035919 EAL domain superfamily KHQ88_02100 IPR000160 GGDEF domain KHQ88_02100 IPR005330 MHYT domain KHQ88_02100 IPR029787 Nucleotide cyclase KHQ88_02100 IPR000014 PAS domain KHQ88_02100 IPR035965 PAS domain superfamily KHQ88_02100 IPR001633 EAL domain KHQ88_02105 IPR036249 Thioredoxin-like superfamily KHQ88_02105 IPR029760 Glutathione peroxidase conserved site KHQ88_02105 IPR029759 Glutathione peroxidase active site KHQ88_02105 IPR000889 Glutathione peroxidase KHQ88_02110 IPR020846 Major facilitator superfamily domain KHQ88_02110 IPR005829 Sugar transporter, conserved site KHQ88_02110 IPR036259 MFS transporter superfamily KHQ88_02110 IPR011701 Major facilitator superfamily KHQ88_02115 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising KHQ88_02115 IPR035077 Phosphoenolpyruvate carboxykinase, C-terminal P-loop domain KHQ88_02115 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal KHQ88_02115 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal KHQ88_02115 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site KHQ88_02115 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal KHQ88_02125 IPR029066 PLP-binding barrel KHQ88_02125 IPR001608 Alanine racemase, N-terminal KHQ88_02130 IPR006230 Protein MutL KHQ88_02135 IPR036724 Cobalamin-binding domain superfamily KHQ88_02135 IPR028991 D-lysine 5,6-aminomutase beta subunit KamE, N-terminal KHQ88_02135 IPR037086 D-Lysine 5,6-aminomutase alpha subunit superfamily KHQ88_02135 IPR006158 Cobalamin (vitamin B12)-binding domain KHQ88_02135 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic KHQ88_02135 IPR036843 D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain superfamily KHQ88_02135 IPR015130 D-Lysine 5,6-aminomutase alpha subunit KHQ88_02140 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic KHQ88_02140 IPR015130 D-Lysine 5,6-aminomutase alpha subunit KHQ88_02145 IPR001926 Pyridoxal-phosphate dependent enzyme KHQ88_02145 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme KHQ88_02155 IPR036291 NAD(P)-binding domain superfamily KHQ88_02160 IPR036393 Acetylglutamate kinase-like superfamily KHQ88_02160 IPR001048 Aspartate/glutamate/uridylate kinase KHQ88_02160 IPR003964 Carbamate kinase KHQ88_02165 IPR002292 Ornithine/putrescine carbamoyltransferase KHQ88_02165 IPR006130 Aspartate/ornithine carbamoyltransferase KHQ88_02165 IPR024904 Ornithine carbamoyltransferase KHQ88_02165 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding KHQ88_02165 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily KHQ88_02165 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain KHQ88_02175 IPR002052 DNA methylase, N-6 adenine-specific, conserved site KHQ88_02175 IPR000241 Putative RNA methylase domain KHQ88_02175 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase KHQ88_02175 IPR004114 THUMP domain KHQ88_02190 IPR013324 RNA polymerase sigma factor, region 3/4-like KHQ88_02190 IPR002852 Uncharacterised protein family UPF0251 KHQ88_02190 IPR036388 Winged helix-like DNA-binding domain superfamily KHQ88_02200 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant KHQ88_02200 IPR019479 Peroxiredoxin, C-terminal KHQ88_02200 IPR022915 Peroxiredoxin, TDXH subfamily KHQ88_02200 IPR036249 Thioredoxin-like superfamily KHQ88_02200 IPR013766 Thioredoxin domain KHQ88_02200 IPR024706 Peroxiredoxin, AhpC-type KHQ88_02210 IPR011961 16S rRNA processing protein RimM KHQ88_02210 IPR027275 PRC-barrel domain KHQ88_02210 IPR011033 PRC-barrel-like superfamily KHQ88_02210 IPR002676 RimM, N-terminal KHQ88_02210 IPR009000 Translation protein, beta-barrel domain superfamily KHQ88_02210 IPR036976 RimM, N-terminal domain superfamily KHQ88_02215 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal KHQ88_02215 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal KHQ88_02215 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KHQ88_02215 IPR029028 Alpha/beta knot methyltransferases KHQ88_02215 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria KHQ88_02220 IPR038657 Ribosomal protein L19 superfamily KHQ88_02220 IPR001857 Ribosomal protein L19 KHQ88_02220 IPR018257 Ribosomal protein L19, conserved site KHQ88_02220 IPR008991 Translation protein SH3-like domain superfamily KHQ88_02225 IPR006377 Catabolite control protein A KHQ88_02225 IPR010982 Lambda repressor-like, DNA-binding domain superfamily KHQ88_02225 IPR028082 Periplasmic binding protein-like I KHQ88_02225 IPR000843 LacI-type HTH domain KHQ88_02230 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site KHQ88_02230 IPR002305 Aminoacyl-tRNA synthetase, class Ic KHQ88_02230 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold KHQ88_02230 IPR002942 RNA-binding S4 domain KHQ88_02230 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 KHQ88_02230 IPR036986 RNA-binding S4 domain superfamily KHQ88_02230 IPR002307 Tyrosine-tRNA ligase KHQ88_02230 IPR024088 Tyrosine-tRNA ligase, bacterial-type KHQ88_02235 IPR016169 FAD-binding, type PCMH, subdomain 2 KHQ88_02235 IPR000644 CBS domain KHQ88_02235 IPR005170 Transporter-associated domain KHQ88_02235 IPR002550 CNNM, transmembrane domain KHQ88_02235 IPR036318 FAD-binding, type PCMH-like superfamily KHQ88_02240 IPR023299 P-type ATPase, cytoplasmic domain N KHQ88_02240 IPR018303 P-type ATPase, phosphorylation site KHQ88_02240 IPR023298 P-type ATPase, transmembrane domain superfamily KHQ88_02240 IPR008250 P-type ATPase, A domain superfamily KHQ88_02240 IPR036412 HAD-like superfamily KHQ88_02240 IPR023214 HAD superfamily KHQ88_02240 IPR017969 Heavy-metal-associated, conserved site KHQ88_02240 IPR006121 Heavy metal-associated domain, HMA KHQ88_02240 IPR027256 P-type ATPase, subfamily IB KHQ88_02240 IPR001757 P-type ATPase KHQ88_02240 IPR036163 Heavy metal-associated domain superfamily KHQ88_02245 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site KHQ88_02245 IPR036264 Bacterial exopeptidase dimerisation domain KHQ88_02245 IPR010964 Peptidase M20A, peptidase V-related KHQ88_02245 IPR002933 Peptidase M20 KHQ88_02250 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase KHQ88_02250 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type KHQ88_02255 IPR023367 Peptidase M42, domain 2 KHQ88_02255 IPR008007 Peptidase M42 KHQ88_02265 IPR004619 Type III pantothenate kinase KHQ88_02270 IPR020045 DNA polymerase I-like, H3TH domain KHQ88_02270 IPR018320 DNA polymerase 1 KHQ88_02270 IPR002298 DNA polymerase A KHQ88_02270 IPR008918 Helix-hairpin-helix motif, class 2 KHQ88_02270 IPR029060 PIN-like domain superfamily KHQ88_02270 IPR012337 Ribonuclease H-like superfamily KHQ88_02270 IPR036397 Ribonuclease H superfamily KHQ88_02270 IPR019760 DNA-directed DNA polymerase, family A, conserved site KHQ88_02270 IPR001098 DNA-directed DNA polymerase, family A, palm domain KHQ88_02270 IPR036279 5'-3' exonuclease, C-terminal domain superfamily KHQ88_02270 IPR002421 5'-3' exonuclease, N-terminal KHQ88_02270 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal KHQ88_02270 IPR002562 3'-5' exonuclease domain KHQ88_02275 IPR020629 Formamidopyrimidine-DNA glycosylase KHQ88_02275 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site KHQ88_02275 IPR010979 Ribosomal protein S13-like, H2TH KHQ88_02275 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type KHQ88_02275 IPR010663 Zinc finger, FPG/IleRS-type KHQ88_02275 IPR035937 MutM-like, N-terminal KHQ88_02275 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain KHQ88_02275 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding KHQ88_02280 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_02280 IPR001977 Dephospho-CoA kinase KHQ88_02285 IPR006343 DnaD domain KHQ88_02290 IPR002611 IstB-like ATP-binding protein KHQ88_02290 IPR003593 AAA+ ATPase domain KHQ88_02290 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_02290 IPR009928 Primosomal DnaI, N-terminal KHQ88_02295 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) KHQ88_02295 IPR006195 Aminoacyl-tRNA synthetase, class II KHQ88_02295 IPR004154 Anticodon-binding KHQ88_02295 IPR036621 Anticodon-binding domain superfamily KHQ88_02295 IPR012675 Beta-grasp domain superfamily KHQ88_02295 IPR004095 TGS KHQ88_02295 IPR012676 TGS-like KHQ88_02295 IPR033728 Threonine-tRNA ligase catalytic core domain KHQ88_02295 IPR012947 Threonyl/alanyl tRNA synthetase, SAD KHQ88_02295 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily KHQ88_02295 IPR002320 Threonine-tRNA ligase, class IIa KHQ88_02300 IPR008532 NFACT, RNA-binding domain KHQ88_02305 IPR008145 Guanylate kinase/L-type calcium channel beta subunit KHQ88_02305 IPR008144 Guanylate kinase-like domain KHQ88_02305 IPR017665 Guanylate kinase KHQ88_02305 IPR020590 Guanylate kinase, conserved site KHQ88_02305 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_02310 IPR006110 RNA polymerase, subunit omega/K/RPB6 KHQ88_02310 IPR012293 RNA polymerase subunit, RPB6/omega KHQ88_02310 IPR036161 RPB6/omega subunit-like superfamily KHQ88_02310 IPR003716 DNA-directed RNA polymerase, omega subunit KHQ88_02315 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type KHQ88_02315 IPR024754 DNA polymerase III polC-like, N-terminal domain II KHQ88_02315 IPR028112 DNA polymerase III polC-type, N-terminal domain I KHQ88_02315 IPR029460 DNA polymerase, helix-hairpin-helix motif KHQ88_02315 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain KHQ88_02315 IPR013520 Exonuclease, RNase T/DNA polymerase III KHQ88_02315 IPR012340 Nucleic acid-binding, OB-fold KHQ88_02315 IPR004013 PHP domain KHQ88_02315 IPR003141 Polymerase/histidinol phosphatase, N-terminal KHQ88_02315 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain KHQ88_02315 IPR012337 Ribonuclease H-like superfamily KHQ88_02315 IPR036397 Ribonuclease H superfamily KHQ88_02315 IPR040982 DNA polymerase III alpha subunit finger domain KHQ88_02325 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm KHQ88_02325 IPR006195 Aminoacyl-tRNA synthetase, class II KHQ88_02325 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit KHQ88_02325 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal KHQ88_02325 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial KHQ88_02325 IPR002319 Phenylalanyl-tRNA synthetase KHQ88_02330 IPR005121 Ferrodoxin-fold anticodon-binding domain KHQ88_02330 IPR005146 B3/B4 tRNA-binding domain KHQ88_02330 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KHQ88_02330 IPR012340 Nucleic acid-binding, OB-fold KHQ88_02330 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit KHQ88_02330 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KHQ88_02330 IPR009061 Putative DNA-binding domain superfamily KHQ88_02330 IPR005147 tRNA synthetase, B5-domain KHQ88_02330 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain KHQ88_02330 IPR002547 tRNA-binding domain KHQ88_02330 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain KHQ88_02335 IPR013785 Aldolase-type TIM barrel KHQ88_02335 IPR007197 Radical SAM KHQ88_02335 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr KHQ88_02335 IPR027492 Dual-specificity RNA methyltransferase RlmN KHQ88_02335 IPR040072 Methyltransferase (Class A) KHQ88_02340 IPR000023 Phosphofructokinase domain KHQ88_02340 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type KHQ88_02340 IPR035966 Phosphofructokinase superfamily KHQ88_02340 IPR015912 Phosphofructokinase, conserved site KHQ88_02340 IPR022953 ATP-dependent 6-phosphofructokinase KHQ88_02340 IPR012829 Phosphofructokinase, mixed-substrate PFK group III KHQ88_02345 IPR012347 Ferritin-like KHQ88_02345 IPR009078 Ferritin-like superfamily KHQ88_02345 IPR024934 Rubredoxin-like domain KHQ88_02345 IPR003251 Rubrerythrin KHQ88_02345 IPR009040 Ferritin-like diiron domain KHQ88_02350 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal KHQ88_02350 IPR010914 RsgA GTPase domain KHQ88_02350 IPR012340 Nucleic acid-binding, OB-fold KHQ88_02350 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_02350 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain KHQ88_02350 IPR004881 Ribosome biogenesis GTPase RsgA KHQ88_02355 IPR013785 Aldolase-type TIM barrel KHQ88_02355 IPR026019 Ribulose-phosphate 3-epimerase KHQ88_02355 IPR011060 Ribulose-phosphate binding barrel KHQ88_02355 IPR000056 Ribulose-phosphate 3-epimerase-like KHQ88_02365 IPR001478 PDZ domain KHQ88_02365 IPR036034 PDZ superfamily KHQ88_02365 IPR009003 Peptidase S1, PA clan KHQ88_02365 IPR001940 Peptidase S1C KHQ88_02370 IPR001478 PDZ domain KHQ88_02370 IPR036034 PDZ superfamily KHQ88_02370 IPR001940 Peptidase S1C KHQ88_02370 IPR009003 Peptidase S1, PA clan KHQ88_02375 IPR006175 YjgF/YER057c/UK114 family KHQ88_02375 IPR035959 RutC-like superfamily KHQ88_02375 IPR019897 RidA, conserved site KHQ88_02375 IPR006056 RidA family KHQ88_02380 IPR001383 Ribosomal protein L28 KHQ88_02380 IPR037147 Ribosomal protein L28/L24 superfamily KHQ88_02380 IPR026569 Ribosomal protein L28/L24 KHQ88_02380 IPR034704 L28p-like KHQ88_02385 IPR036117 DhaL domain superfamily KHQ88_02385 IPR019986 DAK2 domain-containing protein YloV KHQ88_02385 IPR033470 Uncharacterised protein, DhaK domain KHQ88_02385 IPR004007 DhaL domain KHQ88_02390 IPR004609 ATP-dependent DNA helicase RecG KHQ88_02390 IPR011545 DEAD/DEAH box helicase domain KHQ88_02390 IPR014001 Helicase superfamily 1/2, ATP-binding domain KHQ88_02390 IPR001650 Helicase, C-terminal KHQ88_02390 IPR033454 RecG, wedge domain KHQ88_02390 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_02390 IPR012340 Nucleic acid-binding, OB-fold KHQ88_02395 IPR003664 Fatty acid synthesis PlsX protein KHQ88_02395 IPR012281 Phospholipid biosynthesis protein, PlsX-like KHQ88_02400 IPR014720 Double-stranded RNA-binding domain KHQ88_02400 IPR011907 Ribonuclease III KHQ88_02400 IPR000999 Ribonuclease III domain KHQ88_02400 IPR036389 Ribonuclease III, endonuclease domain superfamily KHQ88_02410 IPR011257 DNA glycosylase KHQ88_02410 IPR004036 Endonuclease III-like, conserved site-2 KHQ88_02410 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif KHQ88_02410 IPR004035 Endonuclease III, iron-sulphur binding site KHQ88_02410 IPR000445 Helix-hairpin-helix motif KHQ88_02410 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal KHQ88_02410 IPR005759 Endonuclease III KHQ88_02410 IPR003265 HhH-GPD domain KHQ88_02420 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_02420 IPR019591 Mrp/NBP35 ATP-binding protein KHQ88_02420 IPR000808 Mrp, conserved site KHQ88_02420 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 KHQ88_02430 IPR002677 Ribosomal protein L32p KHQ88_02430 IPR011332 Zinc-binding ribosomal protein KHQ88_02435 IPR002903 Ribosomal RNA small subunit methyltransferase H KHQ88_02435 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily KHQ88_02435 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase KHQ88_02450 IPR011066 Mechanosensitive ion channel MscS, C-terminal KHQ88_02450 IPR010920 LSM domain superfamily KHQ88_02450 IPR006685 Mechanosensitive ion channel MscS KHQ88_02450 IPR023408 Mechanosensitive ion channel MscS domain superfamily KHQ88_02450 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 KHQ88_02455 IPR003593 AAA+ ATPase domain KHQ88_02455 IPR003439 ABC transporter-like KHQ88_02455 IPR017871 ABC transporter, conserved site KHQ88_02455 IPR015854 ABC transporter, lipoprotein release, LolD KHQ88_02455 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_02460 IPR025857 MacB-like periplasmic core domain KHQ88_02460 IPR003838 ABC transporter permease protein domain KHQ88_02460 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E KHQ88_02470 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) KHQ88_02470 IPR006195 Aminoacyl-tRNA synthetase, class II KHQ88_02470 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb KHQ88_02470 IPR012340 Nucleic acid-binding, OB-fold KHQ88_02470 IPR004523 Aspartate-tRNA synthetase, type 2 KHQ88_02470 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type KHQ88_02475 IPR020103 Pseudouridine synthase, catalytic domain superfamily KHQ88_02475 IPR006225 Pseudouridine synthase, RluC/RluD KHQ88_02475 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site KHQ88_02475 IPR006145 Pseudouridine synthase, RsuA/RluA KHQ88_02475 IPR002942 RNA-binding S4 domain KHQ88_02475 IPR036986 RNA-binding S4 domain superfamily KHQ88_02480 IPR000766 Galactose-1-phosphate uridyl transferase, class II KHQ88_02480 IPR023425 Galactose-1-phosphate uridyl transferase, class II, conserved site KHQ88_02480 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal KHQ88_02480 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal KHQ88_02485 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) KHQ88_02485 IPR006195 Aminoacyl-tRNA synthetase, class II KHQ88_02485 IPR004154 Anticodon-binding KHQ88_02485 IPR036621 Anticodon-binding domain superfamily KHQ88_02485 IPR002316 Proline-tRNA ligase, class IIa KHQ88_02485 IPR033721 Prolyl-tRNA synthetase, catalytic domain KHQ88_02485 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type KHQ88_02485 IPR016061 Proline-tRNA ligase, class II, C-terminal KHQ88_02485 IPR017449 Prolyl-tRNA synthetase, class II KHQ88_02495 IPR011167 Iron-dependent fumarate hydratase KHQ88_02495 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain KHQ88_02495 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain KHQ88_02495 IPR020557 Fumarate lyase, conserved site KHQ88_02495 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily KHQ88_02505 IPR003797 DegV KHQ88_02510 IPR003593 AAA+ ATPase domain KHQ88_02510 IPR011527 ABC transporter type 1, transmembrane domain KHQ88_02510 IPR036640 ABC transporter type 1, transmembrane domain superfamily KHQ88_02510 IPR003439 ABC transporter-like KHQ88_02510 IPR017871 ABC transporter, conserved site KHQ88_02510 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_02510 IPR039421 Type I protein exporter KHQ88_02515 IPR011527 ABC transporter type 1, transmembrane domain KHQ88_02515 IPR036640 ABC transporter type 1, transmembrane domain superfamily KHQ88_02515 IPR003439 ABC transporter-like KHQ88_02515 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_02515 IPR039421 Type I protein exporter KHQ88_02515 IPR003593 AAA+ ATPase domain KHQ88_02525 IPR003593 AAA+ ATPase domain KHQ88_02525 IPR011527 ABC transporter type 1, transmembrane domain KHQ88_02525 IPR036640 ABC transporter type 1, transmembrane domain superfamily KHQ88_02525 IPR017871 ABC transporter, conserved site KHQ88_02525 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_02525 IPR039421 Type I protein exporter KHQ88_02525 IPR003439 ABC transporter-like KHQ88_02530 IPR039421 Type I protein exporter KHQ88_02530 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_02530 IPR003439 ABC transporter-like KHQ88_02530 IPR036640 ABC transporter type 1, transmembrane domain superfamily KHQ88_02530 IPR011527 ABC transporter type 1, transmembrane domain KHQ88_02530 IPR003593 AAA+ ATPase domain KHQ88_02535 IPR002792 TRAM domain KHQ88_02535 IPR005839 Methylthiotransferase KHQ88_02535 IPR038135 Methylthiotransferase, N-terminal domain superfamily KHQ88_02535 IPR006638 Elp3/MiaB/NifB KHQ88_02535 IPR007197 Radical SAM KHQ88_02535 IPR020612 Methylthiotransferase, conserved site KHQ88_02535 IPR013848 Methylthiotransferase, N-terminal KHQ88_02535 IPR023404 Radical SAM, alpha/beta horseshoe KHQ88_02535 IPR041582 RimO, TRAM domain KHQ88_02535 IPR005840 Ribosomal protein S12 methylthiotransferase RimO KHQ88_02545 IPR017439 Amidohydrolase KHQ88_02545 IPR011650 Peptidase M20, dimerisation domain KHQ88_02545 IPR036264 Bacterial exopeptidase dimerisation domain KHQ88_02545 IPR002933 Peptidase M20 KHQ88_02550 IPR006680 Amidohydrolase-related KHQ88_02550 IPR011059 Metal-dependent hydrolase, composite domain superfamily KHQ88_02550 IPR032466 Metal-dependent hydrolase KHQ88_02550 IPR023512 Deaminase MtaD/DadD KHQ88_02555 IPR036649 Inorganic pyrophosphatase superfamily KHQ88_02555 IPR008162 Inorganic pyrophosphatase KHQ88_02565 IPR002114 Phosphotransferase system, HPr serine phosphorylation site KHQ88_02565 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site KHQ88_02565 IPR035895 HPr-like superfamily KHQ88_02565 IPR000032 Phosphocarrier protein HPr-like KHQ88_02575 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold KHQ88_02575 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site KHQ88_02575 IPR002306 Tryptophan-tRNA ligase KHQ88_02575 IPR024109 Tryptophan-tRNA ligase, bacterial-type KHQ88_02575 IPR002305 Aminoacyl-tRNA synthetase, class Ic KHQ88_02580 IPR013647 Oligopeptidase F, N-terminal domain KHQ88_02580 IPR042088 Oligoendopeptidase F, C-terminal domain KHQ88_02580 IPR001567 Peptidase M3A/M3B catalytic domain KHQ88_02580 IPR004438 Peptidase M3B, oligoendopeptidase F KHQ88_02585 IPR006660 Arsenate reductase-like KHQ88_02585 IPR036249 Thioredoxin-like superfamily KHQ88_02585 IPR006504 Transcriptional regulator Spx/MgsR KHQ88_02585 IPR023731 Regulatory protein Spx KHQ88_02590 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family KHQ88_02590 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site KHQ88_02590 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain KHQ88_02590 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain KHQ88_02590 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I KHQ88_02590 IPR036291 NAD(P)-binding domain superfamily KHQ88_02600 IPR007865 Aminopeptidase P, N-terminal KHQ88_02600 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal KHQ88_02600 IPR036005 Creatinase/aminopeptidase-like KHQ88_02600 IPR001714 Peptidase M24, methionine aminopeptidase KHQ88_02600 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site KHQ88_02600 IPR000994 Peptidase M24 KHQ88_02605 IPR006345 RecD-like DNA helicase KHQ88_02605 IPR029493 RecD helicase-like helix-hairpin-helix domain KHQ88_02605 IPR041451 RecD-like DNA helicase, SH3 domain KHQ88_02605 IPR027785 UvrD-like helicase C-terminal domain KHQ88_02605 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_02605 IPR003593 AAA+ ATPase domain KHQ88_02610 IPR012947 Threonyl/alanyl tRNA synthetase, SAD KHQ88_02610 IPR009000 Translation protein, beta-barrel domain superfamily KHQ88_02610 IPR003156 DHHA1 domain KHQ88_02610 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria KHQ88_02610 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal KHQ88_02610 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain KHQ88_02610 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily KHQ88_02610 IPR002318 Alanine-tRNA ligase, class IIc KHQ88_02610 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily KHQ88_02615 IPR005227 Putative pre-16S rRNA nuclease KHQ88_02615 IPR012337 Ribonuclease H-like superfamily KHQ88_02615 IPR037027 YqgF/RNase H-like domain superfamily KHQ88_02615 IPR006641 YqgF/RNase H-like domain KHQ88_02620 IPR009711 Uncharacterised protein family UPF0473 KHQ88_02625 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase KHQ88_02625 IPR002935 Class I-like SAM-dependent O-methyltransferase KHQ88_02635 IPR032525 Peptidase family U32, C-terminal KHQ88_02635 IPR001539 Peptidase U32 KHQ88_02640 IPR018151 Transcription elongation factor, GreA/GreB, conserved site KHQ88_02640 IPR006359 Transcription elongation factor GreA KHQ88_02640 IPR028624 Transcription elongation factor GreA/GreB KHQ88_02640 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal KHQ88_02640 IPR023459 Transcription elongation factor GreA/GreB family KHQ88_02640 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal KHQ88_02640 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily KHQ88_02640 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily KHQ88_02645 IPR010049 MTA/SAH nucleosidase KHQ88_02645 IPR000845 Nucleoside phosphorylase domain KHQ88_02645 IPR035994 Nucleoside phosphorylase superfamily KHQ88_02655 IPR006439 HAD hydrolase, subfamily IA KHQ88_02655 IPR006549 HAD-superfamily hydrolase,subfamily IIIA KHQ88_02655 IPR023214 HAD superfamily KHQ88_02655 IPR010021 HAD-superfamily phosphatase, YqeG-like KHQ88_02655 IPR036412 HAD-like superfamily KHQ88_02660 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain KHQ88_02660 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH KHQ88_02660 IPR006073 GTP binding domain KHQ88_02660 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_02670 IPR004394 Protein Iojap/ribosomal silencing factor RsfS KHQ88_02675 IPR041698 Methyltransferase domain 25 KHQ88_02675 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase KHQ88_02680 IPR004787 Competence protein ComEA KHQ88_02680 IPR019554 Soluble ligand binding domain KHQ88_02680 IPR004509 Competence protein ComEA, helix-hairpin-helix domain KHQ88_02680 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 KHQ88_02680 IPR010994 RuvA domain 2-like KHQ88_02690 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal KHQ88_02690 IPR010372 DNA polymerase III delta, N-terminal KHQ88_02690 IPR005790 DNA polymerase III, delta subunit KHQ88_02690 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_02695 IPR002583 Ribosomal protein S20 KHQ88_02695 IPR036510 Ribosomal protein S20 superfamily KHQ88_02705 IPR015806 Pyruvate kinase, insert domain superfamily KHQ88_02705 IPR036918 Pyruvate kinase, C-terminal domain superfamily KHQ88_02705 IPR015795 Pyruvate kinase, C-terminal KHQ88_02705 IPR001697 Pyruvate kinase KHQ88_02705 IPR040442 Pyruvate kinase-like domain superfamily KHQ88_02705 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily KHQ88_02705 IPR036637 Phosphohistidine domain superfamily KHQ88_02705 IPR011037 Pyruvate kinase-like, insert domain superfamily KHQ88_02705 IPR008279 PEP-utilising enzyme, mobile domain KHQ88_02705 IPR015793 Pyruvate kinase, barrel KHQ88_02710 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain KHQ88_02710 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger KHQ88_02710 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain KHQ88_02745 IPR011006 CheY-like superfamily KHQ88_02745 IPR001867 OmpR/PhoB-type DNA-binding domain KHQ88_02745 IPR016032 Signal transduction response regulator, C-terminal effector KHQ88_02745 IPR039420 Transcriptional regulatory protein WalR-like KHQ88_02745 IPR036388 Winged helix-like DNA-binding domain superfamily KHQ88_02745 IPR001789 Signal transduction response regulator, receiver domain KHQ88_02750 IPR005467 Histidine kinase domain KHQ88_02750 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily KHQ88_02750 IPR003594 Histidine kinase/HSP90-like ATPase KHQ88_02750 IPR003660 HAMP domain KHQ88_02750 IPR001610 PAC motif KHQ88_02750 IPR000014 PAS domain KHQ88_02750 IPR000700 PAS-associated, C-terminal KHQ88_02750 IPR035965 PAS domain superfamily KHQ88_02750 IPR004358 Signal transduction histidine kinase-related protein, C-terminal KHQ88_02750 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain KHQ88_02750 IPR036890 Histidine kinase/HSP90-like ATPase superfamily KHQ88_02755 IPR014922 Domain of unknown function DUF1801 KHQ88_02760 IPR021354 Protein of unknown function DUF2975 KHQ88_02770 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain KHQ88_02770 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain KHQ88_02770 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger KHQ88_02790 IPR003593 AAA+ ATPase domain KHQ88_02790 IPR032524 ABC transporter Uup, C-terminal KHQ88_02790 IPR032781 ABC-transporter extension domain KHQ88_02790 IPR003439 ABC transporter-like KHQ88_02790 IPR017871 ABC transporter, conserved site KHQ88_02790 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_02790 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily KHQ88_02795 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding KHQ88_02795 IPR001278 Arginine-tRNA ligase KHQ88_02795 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold KHQ88_02795 IPR005148 Arginyl tRNA synthetase N-terminal domain KHQ88_02795 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily KHQ88_02795 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KHQ88_02795 IPR008909 DALR anticodon binding KHQ88_02800 IPR003593 AAA+ ATPase domain KHQ88_02800 IPR011527 ABC transporter type 1, transmembrane domain KHQ88_02800 IPR036640 ABC transporter type 1, transmembrane domain superfamily KHQ88_02800 IPR017871 ABC transporter, conserved site KHQ88_02800 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_02800 IPR003439 ABC transporter-like KHQ88_02800 IPR039421 Type I protein exporter KHQ88_02805 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_02805 IPR039421 Type I protein exporter KHQ88_02805 IPR003593 AAA+ ATPase domain KHQ88_02805 IPR017871 ABC transporter, conserved site KHQ88_02805 IPR003439 ABC transporter-like KHQ88_02805 IPR036640 ABC transporter type 1, transmembrane domain superfamily KHQ88_02805 IPR011527 ABC transporter type 1, transmembrane domain KHQ88_02820 IPR001789 Signal transduction response regulator, receiver domain KHQ88_02820 IPR037522 HD-GYP domain KHQ88_02820 IPR003607 HD/PDEase domain KHQ88_02820 IPR011006 CheY-like superfamily KHQ88_02825 IPR001110 Uncharacterised protein family UPF0012, conserved site KHQ88_02825 IPR036526 Carbon-nitrogen hydrolase superfamily KHQ88_02825 IPR003010 Carbon-nitrogen hydrolase KHQ88_02845 IPR005982 Thioredoxin reductase KHQ88_02845 IPR036188 FAD/NAD(P)-binding domain superfamily KHQ88_02845 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site KHQ88_02845 IPR023753 FAD/NAD(P)-binding domain KHQ88_02850 IPR000515 ABC transporter type 1, transmembrane domain MetI-like KHQ88_02850 IPR035906 MetI-like superfamily KHQ88_02855 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent KHQ88_02855 IPR016161 Aldehyde/histidinol dehydrogenase KHQ88_02855 IPR016163 Aldehyde dehydrogenase, C-terminal KHQ88_02855 IPR016160 Aldehyde dehydrogenase, cysteine active site KHQ88_02855 IPR029510 Aldehyde dehydrogenase, glutamic acid active site KHQ88_02855 IPR016162 Aldehyde dehydrogenase, N-terminal KHQ88_02855 IPR015590 Aldehyde dehydrogenase domain KHQ88_02880 IPR027469 Cation efflux transmembrane domain superfamily KHQ88_02880 IPR023500 Zinc transporter ZitB KHQ88_02880 IPR036837 Cation efflux protein, cytoplasmic domain superfamily KHQ88_02880 IPR002524 Cation efflux protein KHQ88_02895 IPR025110 AMP-binding enzyme, C-terminal domain KHQ88_02895 IPR042099 AMP-dependent synthetase-like superfamily KHQ88_02895 IPR020845 AMP-binding, conserved site KHQ88_02895 IPR000873 AMP-dependent synthetase/ligase KHQ88_02900 IPR009057 Homeobox-like domain superfamily KHQ88_02900 IPR001647 DNA-binding HTH domain, TetR-type KHQ88_02920 IPR036884 [2Fe-2S]-binding domain superfamily KHQ88_02920 IPR002888 [2Fe-2S]-binding KHQ88_02920 IPR012675 Beta-grasp domain superfamily KHQ88_02920 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site KHQ88_02920 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain KHQ88_02920 IPR036010 2Fe-2S ferredoxin-like superfamily KHQ88_02925 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding KHQ88_02925 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily KHQ88_02925 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead KHQ88_02925 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily KHQ88_02945 IPR006680 Amidohydrolase-related KHQ88_02945 IPR011059 Metal-dependent hydrolase, composite domain superfamily KHQ88_02945 IPR011778 Hydantoinase/dihydropyrimidinase KHQ88_02945 IPR032466 Metal-dependent hydrolase KHQ88_02950 IPR006680 Amidohydrolase-related KHQ88_02950 IPR023512 Deaminase MtaD/DadD KHQ88_02950 IPR011059 Metal-dependent hydrolase, composite domain superfamily KHQ88_02950 IPR032466 Metal-dependent hydrolase KHQ88_02955 IPR013785 Aldolase-type TIM barrel KHQ88_02955 IPR033888 Dihydroorotate dehydrogenase, class 1B KHQ88_02955 IPR005720 Dihydroorotate dehydrogenase domain KHQ88_02955 IPR024920 Dihydroorotate dehydrogenase, class 1 KHQ88_02955 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 KHQ88_02955 IPR001295 Dihydroorotate dehydrogenase, conserved site KHQ88_02960 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding KHQ88_02960 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily KHQ88_02960 IPR017609 Xanthine dehydrogenase D subunit KHQ88_02960 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily KHQ88_02960 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead KHQ88_02965 IPR036884 [2Fe-2S]-binding domain superfamily KHQ88_02965 IPR012675 Beta-grasp domain superfamily KHQ88_02965 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site KHQ88_02965 IPR002888 [2Fe-2S]-binding KHQ88_02965 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain KHQ88_02965 IPR036010 2Fe-2S ferredoxin-like superfamily KHQ88_02975 IPR006679 Adenine deaminase KHQ88_02975 IPR032466 Metal-dependent hydrolase KHQ88_02975 IPR011059 Metal-dependent hydrolase, composite domain superfamily KHQ88_02975 IPR006680 Amidohydrolase-related KHQ88_02975 IPR026912 Adenine deaminase C-terminal domain KHQ88_02980 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme KHQ88_02980 IPR001926 Pyridoxal-phosphate dependent enzyme KHQ88_02980 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site KHQ88_02980 IPR026260 Threonine synthase, bacterial/archaeal KHQ88_02980 IPR004450 Threonine synthase-like KHQ88_02985 IPR005859 Cysteine synthase CysK KHQ88_02985 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site KHQ88_02985 IPR001926 Pyridoxal-phosphate dependent enzyme KHQ88_02985 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme KHQ88_02985 IPR005856 Cysteine synthase KHQ88_02990 IPR036264 Bacterial exopeptidase dimerisation domain KHQ88_02990 IPR017706 Peptidase M20/DapE, YgeY KHQ88_02990 IPR011650 Peptidase M20, dimerisation domain KHQ88_02990 IPR002933 Peptidase M20 KHQ88_02990 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site KHQ88_02995 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding KHQ88_02995 IPR006130 Aspartate/ornithine carbamoyltransferase KHQ88_02995 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily KHQ88_02995 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain KHQ88_02995 IPR002292 Ornithine/putrescine carbamoyltransferase KHQ88_02995 IPR024904 Ornithine carbamoyltransferase KHQ88_03005 IPR016193 Cytidine deaminase-like KHQ88_03005 IPR016192 APOBEC/CMP deaminase, zinc-binding KHQ88_03005 IPR002125 Cytidine and deoxycytidylate deaminase domain KHQ88_03015 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain KHQ88_03015 IPR019491 Lipoate protein ligase, C-terminal KHQ88_03015 IPR004562 Lipoyltransferase/lipoate-protein ligase KHQ88_03020 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 KHQ88_03020 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal KHQ88_03020 IPR022903 Glycine cleavage system T protein, bacteria KHQ88_03020 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KHQ88_03020 IPR028896 Aminomethyltransferase-like KHQ88_03020 IPR006222 Aminomethyltransferase, folate-binding domain KHQ88_03020 IPR006223 Glycine cleavage system T protein KHQ88_03025 IPR000089 Biotin/lipoyl attachment KHQ88_03025 IPR002930 Glycine cleavage system H-protein KHQ88_03025 IPR033753 Glycine cleavage system H-protein/Simiate KHQ88_03025 IPR017453 Glycine cleavage system H-protein, subgroup KHQ88_03025 IPR011053 Single hybrid motif KHQ88_03030 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 KHQ88_03030 IPR020581 Glycine cleavage system P protein KHQ88_03030 IPR015424 Pyridoxal phosphate-dependent transferase KHQ88_03030 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 KHQ88_03030 IPR015421 Pyridoxal phosphate-dependent transferase, major domain KHQ88_03035 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 KHQ88_03035 IPR020581 Glycine cleavage system P protein KHQ88_03035 IPR015424 Pyridoxal phosphate-dependent transferase KHQ88_03035 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 KHQ88_03035 IPR015421 Pyridoxal phosphate-dependent transferase, major domain KHQ88_03045 IPR029787 Nucleotide cyclase KHQ88_03045 IPR033422 Gammaproteobacterial periplasmic sensor domain GAPES2 KHQ88_03045 IPR000160 GGDEF domain KHQ88_03050 IPR011005 Dihydropteroate synthase-like KHQ88_03050 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type KHQ88_03050 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial KHQ88_03055 IPR001544 Aminotransferase class IV KHQ88_03055 IPR018300 Aminotransferase, class IV, conserved site KHQ88_03055 IPR036038 Aminotransferase-like, PLP-dependent enzymes KHQ88_03055 IPR005786 Branched-chain amino acid aminotransferase II KHQ88_03055 IPR033939 Branched-chain aminotransferase KHQ88_03060 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain KHQ88_03060 IPR033922 NAD(P) binding domain of glutamate dehydrogenase KHQ88_03060 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase KHQ88_03060 IPR014362 Glutamate dehydrogenase KHQ88_03060 IPR036291 NAD(P)-binding domain superfamily KHQ88_03060 IPR033524 Leu/Phe/Val dehydrogenases active site KHQ88_03060 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal KHQ88_03070 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 KHQ88_03070 IPR015421 Pyridoxal phosphate-dependent transferase, major domain KHQ88_03070 IPR000192 Aminotransferase class V domain KHQ88_03070 IPR015424 Pyridoxal phosphate-dependent transferase KHQ88_03070 IPR022278 Phosphoserine aminotransferase KHQ88_03070 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site KHQ88_03075 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain KHQ88_03075 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site KHQ88_03075 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KHQ88_03075 IPR036291 NAD(P)-binding domain superfamily KHQ88_03085 IPR038584 Ribosomal protein L33 superfamily KHQ88_03085 IPR001705 Ribosomal protein L33 KHQ88_03085 IPR018264 Ribosomal protein L33, conserved site KHQ88_03085 IPR011332 Zinc-binding ribosomal protein KHQ88_03090 IPR001279 Metallo-beta-lactamase KHQ88_03090 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like KHQ88_03095 IPR001789 Signal transduction response regulator, receiver domain KHQ88_03095 IPR037522 HD-GYP domain KHQ88_03095 IPR003607 HD/PDEase domain KHQ88_03095 IPR011006 CheY-like superfamily KHQ88_03120 IPR018170 Aldo/keto reductase, conserved site KHQ88_03120 IPR036812 NADP-dependent oxidoreductase domain superfamily KHQ88_03120 IPR023210 NADP-dependent oxidoreductase domain KHQ88_03120 IPR020471 Aldo/keto reductase KHQ88_03125 IPR036390 Winged helix DNA-binding domain superfamily KHQ88_03125 IPR000600 ROK family KHQ88_03125 IPR036388 Winged helix-like DNA-binding domain superfamily KHQ88_03125 IPR022687 DTXR-type HTH domain KHQ88_03130 IPR036237 Xylose isomerase-like superfamily KHQ88_03130 IPR013022 Xylose isomerase-like, TIM barrel domain KHQ88_03130 IPR001998 Xylose isomerase KHQ88_03130 IPR013452 Xylose isomerase, bacterial-type KHQ88_03135 IPR000577 Carbohydrate kinase, FGGY KHQ88_03135 IPR018485 Carbohydrate kinase, FGGY, C-terminal KHQ88_03135 IPR018483 Carbohydrate kinase, FGGY, conserved site KHQ88_03135 IPR018484 Carbohydrate kinase, FGGY, N-terminal KHQ88_03135 IPR006000 Xylulokinase KHQ88_03140 IPR003593 AAA+ ATPase domain KHQ88_03140 IPR003439 ABC transporter-like KHQ88_03140 IPR017871 ABC transporter, conserved site KHQ88_03140 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_03145 IPR001851 ABC transporter, permease KHQ88_03150 IPR028082 Periplasmic binding protein-like I KHQ88_03150 IPR025997 Periplasmic binding protein KHQ88_03155 IPR036291 NAD(P)-binding domain superfamily KHQ88_03155 IPR000683 Oxidoreductase, N-terminal KHQ88_03160 IPR000683 Oxidoreductase, N-terminal KHQ88_03160 IPR036291 NAD(P)-binding domain superfamily KHQ88_03160 IPR004104 Oxidoreductase, C-terminal KHQ88_03165 IPR029016 GAF-like domain superfamily KHQ88_03165 IPR002571 Heat-inducible transcription repressor HrcA KHQ88_03165 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal KHQ88_03165 IPR036388 Winged helix-like DNA-binding domain superfamily KHQ88_03165 IPR036390 Winged helix DNA-binding domain superfamily KHQ88_03165 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily KHQ88_03170 IPR000740 GrpE nucleotide exchange factor KHQ88_03170 IPR013805 GrpE nucleotide exchange factor, coiled-coil KHQ88_03170 IPR009012 GrpE nucleotide exchange factor, head KHQ88_03175 IPR012725 Chaperone DnaK KHQ88_03175 IPR018181 Heat shock protein 70, conserved site KHQ88_03175 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily KHQ88_03175 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily KHQ88_03175 IPR013126 Heat shock protein 70 family KHQ88_03180 IPR012724 Chaperone DnaJ KHQ88_03180 IPR001623 DnaJ domain KHQ88_03180 IPR018253 DnaJ domain, conserved site KHQ88_03180 IPR008971 HSP40/DnaJ peptide-binding KHQ88_03180 IPR001305 Heat shock protein DnaJ, cysteine-rich domain KHQ88_03180 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily KHQ88_03180 IPR036869 Chaperone J-domain superfamily KHQ88_03180 IPR002939 Chaperone DnaJ, C-terminal KHQ88_03185 IPR011991 ArsR-like helix-turn-helix domain KHQ88_03185 IPR005149 Transcription regulator PadR, N-terminal KHQ88_03185 IPR036390 Winged helix DNA-binding domain superfamily KHQ88_03185 IPR036388 Winged helix-like DNA-binding domain superfamily KHQ88_03205 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal KHQ88_03205 IPR001206 Diacylglycerol kinase, catalytic domain KHQ88_03205 IPR029028 Alpha/beta knot methyltransferases KHQ88_03205 IPR006700 Ribosomal RNA small subunit methyltransferase E KHQ88_03205 IPR015947 PUA-like superfamily KHQ88_03210 IPR006638 Elp3/MiaB/NifB KHQ88_03210 IPR005839 Methylthiotransferase KHQ88_03210 IPR020612 Methylthiotransferase, conserved site KHQ88_03210 IPR013848 Methylthiotransferase, N-terminal KHQ88_03210 IPR038135 Methylthiotransferase, N-terminal domain superfamily KHQ88_03210 IPR006467 MiaB-like tRNA modifying enzyme KHQ88_03210 IPR007197 Radical SAM KHQ88_03210 IPR023404 Radical SAM, alpha/beta horseshoe KHQ88_03210 IPR034557 Threonylcarbamoyladenosine tRNA methylthiotransferase KHQ88_03210 IPR002792 TRAM domain KHQ88_03220 IPR001911 Ribosomal protein S21 KHQ88_03220 IPR038380 Ribosomal protein S21 superfamily KHQ88_03225 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_03225 IPR003714 PhoH-like protein KHQ88_03230 IPR002036 Endoribonuclease YbeY KHQ88_03230 IPR023091 Metalloprotease catalytic domain superfamily, predicted KHQ88_03230 IPR020549 Endoribonuclease YbeY, conserved site KHQ88_03235 IPR016192 APOBEC/CMP deaminase, zinc-binding KHQ88_03235 IPR002125 Cytidine and deoxycytidylate deaminase domain KHQ88_03235 IPR006262 Cytidine deaminase, homotetrameric KHQ88_03235 IPR016193 Cytidine deaminase-like KHQ88_03240 IPR030388 Era-type guanine nucleotide-binding (G) domain KHQ88_03240 IPR015946 K homology domain-like, alpha/beta KHQ88_03240 IPR004044 K Homology domain, type 2 KHQ88_03240 IPR009019 K homology domain superfamily, prokaryotic type KHQ88_03240 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_03240 IPR005225 Small GTP-binding protein domain KHQ88_03240 IPR005662 GTP-binding protein Era KHQ88_03240 IPR006073 GTP binding domain KHQ88_03245 IPR042242 Recombination protein O, zinc-binding domain KHQ88_03245 IPR037278 ARFGAP/RecO-like zinc finger KHQ88_03245 IPR022572 DNA replication/recombination mediator RecO, N-terminal KHQ88_03245 IPR012340 Nucleic acid-binding, OB-fold KHQ88_03245 IPR003717 Recombination protein O, RecO KHQ88_03260 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) KHQ88_03260 IPR027031 Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 KHQ88_03260 IPR036621 Anticodon-binding domain superfamily KHQ88_03260 IPR004154 Anticodon-binding KHQ88_03260 IPR006195 Aminoacyl-tRNA synthetase, class II KHQ88_03260 IPR022961 Glycine-tRNA ligase, bacterial KHQ88_03260 IPR033731 Glycyl-tRNA synthetase-like core domain KHQ88_03260 IPR002315 Glycyl-tRNA synthetase KHQ88_03265 IPR036977 DNA Primase, CHC2-type zinc finger KHQ88_03265 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily KHQ88_03265 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal KHQ88_03265 IPR013264 DNA primase, catalytic core, N-terminal KHQ88_03265 IPR002694 Zinc finger, CHC2-type KHQ88_03265 IPR006171 TOPRIM domain KHQ88_03265 IPR034151 Bacterial DnaG primase, TOPRIM domain KHQ88_03265 IPR030846 DNA primase DnaG, bacteria KHQ88_03265 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily KHQ88_03265 IPR006295 DNA primase, DnaG KHQ88_03265 IPR019475 DNA primase, DnaB-helicase binding domain KHQ88_03270 IPR013324 RNA polymerase sigma factor, region 3/4-like KHQ88_03270 IPR014284 RNA polymerase sigma-70 like domain KHQ88_03270 IPR000943 RNA polymerase sigma-70 KHQ88_03270 IPR009042 RNA polymerase sigma-70 region 1.2 KHQ88_03270 IPR007627 RNA polymerase sigma-70 region 2 KHQ88_03270 IPR007624 RNA polymerase sigma-70 region 3 KHQ88_03270 IPR007630 RNA polymerase sigma-70 region 4 KHQ88_03270 IPR007127 RNA polymerase sigma factor 70, region 1.1 KHQ88_03270 IPR012760 RNA polymerase sigma factor RpoD, C-terminal KHQ88_03270 IPR042189 Sigma-70 factor, region 1.1 superfamily KHQ88_03270 IPR013325 RNA polymerase sigma factor, region 2 KHQ88_03270 IPR036388 Winged helix-like DNA-binding domain superfamily KHQ88_03270 IPR028630 RNA polymerase sigma factor RpoD KHQ88_03280 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 KHQ88_03280 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal KHQ88_03280 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily KHQ88_03280 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria KHQ88_03285 IPR003797 DegV KHQ88_03295 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain KHQ88_03295 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site KHQ88_03295 IPR000813 7Fe ferredoxin KHQ88_03300 IPR005359 Protein with unknown function UPF0154 KHQ88_03305 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY KHQ88_03310 IPR020568 Ribosomal protein S5 domain 2-type fold KHQ88_03310 IPR002288 DNA gyrase B subunit, C-terminal KHQ88_03310 IPR003594 Histidine kinase/HSP90-like ATPase KHQ88_03310 IPR036890 Histidine kinase/HSP90-like ATPase superfamily KHQ88_03310 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes KHQ88_03310 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup KHQ88_03310 IPR001241 DNA topoisomerase, type IIA KHQ88_03310 IPR013760 DNA topoisomerase, type IIA-like domain superfamily KHQ88_03310 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal KHQ88_03310 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 KHQ88_03310 IPR018522 DNA topoisomerase, type IIA, conserved site KHQ88_03310 IPR006171 TOPRIM domain KHQ88_03315 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta KHQ88_03315 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily KHQ88_03315 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat KHQ88_03315 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal KHQ88_03315 IPR013760 DNA topoisomerase, type IIA-like domain superfamily KHQ88_03315 IPR005741 DNA topoisomerase IV subunit A, Gram-positive KHQ88_03315 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal KHQ88_03330 IPR001667 DDH domain KHQ88_03330 IPR003156 DHHA1 domain KHQ88_03330 IPR004610 Bacterial RecJ exonuclease KHQ88_03330 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal KHQ88_03330 IPR041122 RecJ, OB domain KHQ88_03330 IPR038763 DHH phosphoesterase superfamily KHQ88_03335 IPR005764 Adenine phosphoribosyl transferase KHQ88_03335 IPR000836 Phosphoribosyltransferase domain KHQ88_03335 IPR029057 Phosphoribosyltransferase-like KHQ88_03340 IPR002912 ACT domain KHQ88_03340 IPR012675 Beta-grasp domain superfamily KHQ88_03340 IPR003607 HD/PDEase domain KHQ88_03340 IPR004811 RelA/SpoT family KHQ88_03340 IPR007685 RelA/SpoT KHQ88_03340 IPR004095 TGS KHQ88_03340 IPR012676 TGS-like KHQ88_03340 IPR033655 RelA, TGS domain KHQ88_03345 IPR003732 D-aminoacyl-tRNA deacylase DTD KHQ88_03345 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily KHQ88_03350 IPR003231 Acyl carrier protein (ACP) KHQ88_03350 IPR020806 Polyketide synthase, phosphopantetheine-binding domain KHQ88_03350 IPR009081 Phosphopantetheine binding ACP domain KHQ88_03350 IPR006162 Phosphopantetheine attachment site KHQ88_03350 IPR036736 ACP-like superfamily KHQ88_03355 IPR006195 Aminoacyl-tRNA synthetase, class II KHQ88_03355 IPR004154 Anticodon-binding KHQ88_03355 IPR036621 Anticodon-binding domain superfamily KHQ88_03355 IPR015807 Histidine-tRNA ligase KHQ88_03355 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain KHQ88_03355 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit KHQ88_03355 IPR033656 Histidyl-anticodon-binding KHQ88_03360 IPR002549 Transmembrane protein TqsA-like KHQ88_03370 IPR000594 THIF-type NAD/FAD binding fold KHQ88_03370 IPR035985 Ubiquitin-activating enzyme KHQ88_03375 IPR028427 Peptide methionine sulfoxide reductase KHQ88_03375 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily KHQ88_03375 IPR002569 Peptide methionine sulphoxide reductase MsrA KHQ88_03380 IPR016192 APOBEC/CMP deaminase, zinc-binding KHQ88_03380 IPR002125 Cytidine and deoxycytidylate deaminase domain KHQ88_03380 IPR016473 Deoxycytidylate deaminase KHQ88_03380 IPR015517 Deoxycytidylate deaminase-related KHQ88_03380 IPR035105 Deoxycytidylate deaminase domain KHQ88_03380 IPR016193 Cytidine deaminase-like KHQ88_03385 IPR004815 Lon protease, bacterial/eukaryotic-type KHQ88_03385 IPR027065 Lon protease KHQ88_03385 IPR003959 ATPase, AAA-type, core KHQ88_03385 IPR003593 AAA+ ATPase domain KHQ88_03385 IPR003111 Lon, substrate-binding domain KHQ88_03385 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_03385 IPR008268 Peptidase S16, active site KHQ88_03385 IPR015947 PUA-like superfamily KHQ88_03385 IPR020568 Ribosomal protein S5 domain 2-type fold KHQ88_03385 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup KHQ88_03385 IPR008269 Peptidase S16, Lon proteolytic domain KHQ88_03385 IPR027543 Lon protease, bacterial KHQ88_03395 IPR001872 Peptidase A8, signal peptidase II KHQ88_03400 IPR006225 Pseudouridine synthase, RluC/RluD KHQ88_03400 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site KHQ88_03400 IPR006145 Pseudouridine synthase, RsuA/RluA KHQ88_03400 IPR002942 RNA-binding S4 domain KHQ88_03400 IPR036986 RNA-binding S4 domain superfamily KHQ88_03400 IPR020103 Pseudouridine synthase, catalytic domain superfamily KHQ88_03405 IPR012337 Ribonuclease H-like superfamily KHQ88_03405 IPR001352 Ribonuclease HII/HIII KHQ88_03405 IPR024567 Ribonuclease HII/HIII domain KHQ88_03405 IPR004641 Ribonuclease HIII KHQ88_03405 IPR012295 TBP domain superfamily KHQ88_03405 IPR036397 Ribonuclease H superfamily KHQ88_03405 IPR024568 Ribonuclease HIII, N-terminal KHQ88_03410 IPR036063 Smr domain superfamily KHQ88_03410 IPR000432 DNA mismatch repair protein MutS, C-terminal KHQ88_03410 IPR007696 DNA mismatch repair protein MutS, core KHQ88_03410 IPR036187 DNA mismatch repair protein MutS, core domain superfamily KHQ88_03410 IPR005747 Endonuclease MutS2 KHQ88_03410 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_03410 IPR002625 Smr domain KHQ88_03415 IPR002501 Pseudouridine synthase II, N-terminal KHQ88_03415 IPR014780 tRNA pseudouridine synthase II, TruB KHQ88_03415 IPR032819 tRNA pseudouridylate synthase B, C-terminal KHQ88_03415 IPR020103 Pseudouridine synthase, catalytic domain superfamily KHQ88_03420 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic KHQ88_03420 IPR002606 Riboflavin kinase, bacterial KHQ88_03420 IPR023468 Riboflavin kinase KHQ88_03420 IPR015864 FAD synthetase KHQ88_03420 IPR004821 Cytidyltransferase-like domain KHQ88_03420 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold KHQ88_03420 IPR023465 Riboflavin kinase domain superfamily KHQ88_03430 IPR036611 Trigger factor ribosome-binding domain superfamily KHQ88_03430 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain KHQ88_03430 IPR005215 Trigger factor KHQ88_03430 IPR008880 Trigger factor, C-terminal KHQ88_03430 IPR037041 Trigger factor, C-terminal domain superfamily KHQ88_03430 IPR008881 Trigger factor, ribosome-binding, bacterial KHQ88_03430 IPR027304 Trigger factor/SurA domain superfamily KHQ88_03435 IPR008268 Peptidase S16, active site KHQ88_03435 IPR003959 ATPase, AAA-type, core KHQ88_03435 IPR027543 Lon protease, bacterial KHQ88_03435 IPR004815 Lon protease, bacterial/eukaryotic-type KHQ88_03435 IPR008269 Peptidase S16, Lon proteolytic domain KHQ88_03435 IPR027065 Lon protease KHQ88_03435 IPR003111 Lon, substrate-binding domain KHQ88_03435 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup KHQ88_03435 IPR020568 Ribosomal protein S5 domain 2-type fold KHQ88_03435 IPR015947 PUA-like superfamily KHQ88_03435 IPR003593 AAA+ ATPase domain KHQ88_03435 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_03445 IPR020476 NUDIX hydrolase KHQ88_03445 IPR015797 NUDIX hydrolase-like domain superfamily KHQ88_03445 IPR020084 NUDIX hydrolase, conserved site KHQ88_03445 IPR000086 NUDIX hydrolase domain KHQ88_03445 IPR003562 Mutator MutX protein KHQ88_03455 IPR000589 Ribosomal protein S15 KHQ88_03455 IPR005290 Ribosomal protein S15, bacterial-type KHQ88_03455 IPR009068 S15/NS1, RNA-binding KHQ88_03460 IPR003029 S1 domain KHQ88_03460 IPR022967 RNA-binding domain, S1 KHQ88_03460 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily KHQ88_03460 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain KHQ88_03460 IPR027408 PNPase/RNase PH domain superfamily KHQ88_03460 IPR020568 Ribosomal protein S5 domain 2-type fold KHQ88_03460 IPR012340 Nucleic acid-binding, OB-fold KHQ88_03460 IPR012162 Polyribonucleotide nucleotidyltransferase KHQ88_03460 IPR001247 Exoribonuclease, phosphorolytic domain 1 KHQ88_03460 IPR004087 K Homology domain KHQ88_03460 IPR036345 Exoribonuclease, PH domain 2 superfamily KHQ88_03460 IPR036612 K Homology domain, type 1 superfamily KHQ88_03460 IPR015847 Exoribonuclease, phosphorolytic domain 2 KHQ88_03470 IPR006297 Elongation factor 4 KHQ88_03470 IPR035647 EF-G domain III/V-like KHQ88_03470 IPR000640 Elongation factor EFG, domain V-like KHQ88_03470 IPR031157 Tr-type G domain, conserved site KHQ88_03470 IPR038363 LepA, C-terminal domain superfamily KHQ88_03470 IPR035654 Elongation factor 4, domain IV KHQ88_03470 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_03470 IPR005225 Small GTP-binding protein domain KHQ88_03470 IPR000795 Transcription factor, GTP-binding domain KHQ88_03470 IPR009000 Translation protein, beta-barrel domain superfamily KHQ88_03470 IPR004161 Translation elongation factor EFTu-like, domain 2 KHQ88_03470 IPR013842 GTP-binding protein LepA, C-terminal KHQ88_03475 IPR034505 Anaerobic coproporphyrinogen-III oxidase KHQ88_03475 IPR010723 HemN, C-terminal KHQ88_03475 IPR004559 Heme chaperone HemW-like KHQ88_03475 IPR007197 Radical SAM KHQ88_03475 IPR023404 Radical SAM, alpha/beta horseshoe KHQ88_03475 IPR006638 Elp3/MiaB/NifB KHQ88_03480 IPR011010 DNA breaking-rejoining enzyme, catalytic core KHQ88_03480 IPR013762 Integrase-like, catalytic domain superfamily KHQ88_03480 IPR002104 Integrase, catalytic domain KHQ88_03480 IPR010998 Integrase/recombinase, N-terminal KHQ88_03480 IPR004107 Integrase, SAM-like, N-terminal KHQ88_03480 IPR011932 Tyrosine recombinase XerD KHQ88_03480 IPR023009 Tyrosine recombinase XerC/XerD KHQ88_03485 IPR017850 Alkaline-phosphatase-like, core domain superfamily KHQ88_03485 IPR010045 Phosphopentomutase KHQ88_03485 IPR006124 Metalloenzyme KHQ88_03485 IPR024052 Phosphopentomutase DeoB cap domain superfamily KHQ88_03500 IPR041445 RuvB, AAA lid domain KHQ88_03500 IPR004605 DNA helicase, Holliday junction RuvB-type KHQ88_03500 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_03500 IPR008824 RuvB-like P-loop domain KHQ88_03500 IPR008823 RuvB C-terminal winged helix domain KHQ88_03500 IPR036388 Winged helix-like DNA-binding domain superfamily KHQ88_03500 IPR036390 Winged helix DNA-binding domain superfamily KHQ88_03500 IPR003593 AAA+ ATPase domain KHQ88_03505 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA KHQ88_03505 IPR042118 QueA, domain 1 KHQ88_03505 IPR042119 QueA, domain 2 KHQ88_03505 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily KHQ88_03510 IPR003744 Queuosine precursor transporter KHQ88_03515 IPR009010 Aspartate decarboxylase-like domain superfamily KHQ88_03515 IPR008300 Phosphate propanoyltransferase KHQ88_03520 IPR004803 tRNA-guanine transglycosylase KHQ88_03520 IPR002616 tRNA-guanine(15) transglycosylase-like KHQ88_03520 IPR036511 Queuine tRNA-ribosyltransferase-like KHQ88_03525 IPR000158 Cell division protein FtsZ KHQ88_03525 IPR020805 Cell division protein FtsZ, conserved site KHQ88_03525 IPR024757 Cell division protein FtsZ, C-terminal KHQ88_03525 IPR008280 Tubulin/FtsZ, C-terminal KHQ88_03525 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain KHQ88_03525 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily KHQ88_03525 IPR036525 Tubulin/FtsZ, GTPase domain superfamily KHQ88_03525 IPR003008 Tubulin/FtsZ, GTPase domain KHQ88_03530 IPR000644 CBS domain KHQ88_03530 IPR006668 Magnesium transporter, MgtE intracellular domain KHQ88_03530 IPR038076 MgtE, N-terminal domain superfamily KHQ88_03530 IPR038048 Magnesium transporter MgtE, transmembrane domain KHQ88_03530 IPR006669 Magnesium transporter MgtE KHQ88_03530 IPR006667 SLC41 divalent cation transporters, integral membrane domain KHQ88_03530 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily KHQ88_03535 IPR000644 CBS domain KHQ88_03535 IPR006668 Magnesium transporter, MgtE intracellular domain KHQ88_03535 IPR038076 MgtE, N-terminal domain superfamily KHQ88_03535 IPR038048 Magnesium transporter MgtE, transmembrane domain KHQ88_03535 IPR006669 Magnesium transporter MgtE KHQ88_03535 IPR006667 SLC41 divalent cation transporters, integral membrane domain KHQ88_03535 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily KHQ88_03545 IPR030048 Survival protein SurE KHQ88_03545 IPR002828 Survival protein SurE-like phosphatase/nucleotidase KHQ88_03545 IPR036523 SurE-like phosphatase/nucleotidase superfamily KHQ88_03550 IPR029066 PLP-binding barrel KHQ88_03550 IPR001608 Alanine racemase, N-terminal KHQ88_03550 IPR011078 Pyridoxal phosphate homeostasis protein KHQ88_03555 IPR023052 Cell division protein SepF KHQ88_03555 IPR007561 Cell division protein SepF/SepF-related KHQ88_03555 IPR038594 SepF-like superfamily KHQ88_03565 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site KHQ88_03565 IPR002300 Aminoacyl-tRNA synthetase, class Ia KHQ88_03565 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain KHQ88_03565 IPR002301 Isoleucine-tRNA ligase KHQ88_03565 IPR023585 Isoleucine-tRNA ligase, type 1 KHQ88_03565 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding KHQ88_03565 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold KHQ88_03565 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding KHQ88_03565 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain KHQ88_03565 IPR010663 Zinc finger, FPG/IleRS-type KHQ88_03570 IPR013785 Aldolase-type TIM barrel KHQ88_03570 IPR002915 DeoC/FbaB/ lacD aldolase KHQ88_03570 IPR028581 Deoxyribose-phosphate aldolase type I KHQ88_03570 IPR011343 Deoxyribose-phosphate aldolase KHQ88_03580 IPR004402 Purine nucleoside phosphorylase DeoD-type KHQ88_03580 IPR018016 Nucleoside phosphorylase, conserved site KHQ88_03580 IPR000845 Nucleoside phosphorylase domain KHQ88_03580 IPR035994 Nucleoside phosphorylase superfamily KHQ88_03585 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like KHQ88_03585 IPR007863 Peptidase M16, C-terminal KHQ88_03595 IPR030393 EngB-type guanine nucleotide-binding (G) domain KHQ88_03595 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC KHQ88_03595 IPR006073 GTP binding domain KHQ88_03595 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_03605 IPR036412 HAD-like superfamily KHQ88_03605 IPR020084 NUDIX hydrolase, conserved site KHQ88_03605 IPR023214 HAD superfamily KHQ88_03605 IPR000086 NUDIX hydrolase domain KHQ88_03605 IPR020476 NUDIX hydrolase KHQ88_03605 IPR006357 HAD-superfamily hydrolase, subfamily IIA KHQ88_03605 IPR015797 NUDIX hydrolase-like domain superfamily KHQ88_03610 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site KHQ88_03610 IPR002300 Aminoacyl-tRNA synthetase, class Ia KHQ88_03610 IPR033705 Valyl tRNA synthetase, anticodon-binding domain KHQ88_03610 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding KHQ88_03610 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold KHQ88_03610 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm KHQ88_03610 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding KHQ88_03610 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily KHQ88_03610 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm KHQ88_03610 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain KHQ88_03610 IPR002303 Valine-tRNA ligase KHQ88_03615 IPR001645 Folylpolyglutamate synthetase KHQ88_03615 IPR036565 Mur-like, catalytic domain superfamily KHQ88_03615 IPR004101 Mur ligase, C-terminal KHQ88_03615 IPR036615 Mur ligase, C-terminal domain superfamily KHQ88_03615 IPR013221 Mur ligase, central KHQ88_03615 IPR018109 Folylpolyglutamate synthetase, conserved site KHQ88_03620 IPR041663 DisA/LigA, helix-hairpin-helix motif KHQ88_03620 IPR037518 MPN domain KHQ88_03620 IPR025657 RadC-like JAB domain KHQ88_03620 IPR010994 RuvA domain 2-like KHQ88_03620 IPR001405 Uncharacterised protein family UPF0758 KHQ88_03620 IPR020891 Uncharacterised protein family UPF0758, conserved site KHQ88_03645 IPR000577 Carbohydrate kinase, FGGY KHQ88_03645 IPR018485 Carbohydrate kinase, FGGY, C-terminal KHQ88_03645 IPR018483 Carbohydrate kinase, FGGY, conserved site KHQ88_03645 IPR005999 Glycerol kinase KHQ88_03645 IPR018484 Carbohydrate kinase, FGGY, N-terminal KHQ88_03660 IPR012340 Nucleic acid-binding, OB-fold KHQ88_03660 IPR000424 Primosome PriB/single-strand DNA-binding KHQ88_03660 IPR011344 Single-stranded DNA-binding protein KHQ88_03665 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KHQ88_03665 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KHQ88_03665 IPR000398 Thymidylate synthase KHQ88_03670 IPR012259 Dihydrofolate reductase KHQ88_03670 IPR024072 Dihydrofolate reductase-like domain superfamily KHQ88_03670 IPR017925 Dihydrofolate reductase conserved site KHQ88_03670 IPR001796 Dihydrofolate reductase domain KHQ88_03680 IPR014047 Chromate transporter, long chain KHQ88_03680 IPR003370 Chromate transporter KHQ88_03705 IPR036034 PDZ superfamily KHQ88_03705 IPR001478 PDZ domain KHQ88_03705 IPR041489 PDZ domain 6 KHQ88_03705 IPR011782 Peptidase S1C, Do KHQ88_03705 IPR009003 Peptidase S1, PA clan KHQ88_03705 IPR001940 Peptidase S1C KHQ88_03720 IPR008334 5'-Nucleotidase, C-terminal KHQ88_03720 IPR036907 5'-Nucleotidase, C-terminal domain superfamily KHQ88_03720 IPR006146 5'-Nucleotidase, conserved site KHQ88_03720 IPR006179 5'-Nucleotidase/apyrase KHQ88_03720 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type KHQ88_03720 IPR029052 Metallo-dependent phosphatase-like KHQ88_03725 IPR012337 Ribonuclease H-like superfamily KHQ88_03725 IPR014636 RNase H, phosphoglycerate mutase domain-containing KHQ88_03725 IPR036397 Ribonuclease H superfamily KHQ88_03725 IPR013078 Histidine phosphatase superfamily, clade-1 KHQ88_03725 IPR002156 Ribonuclease H domain KHQ88_03725 IPR029033 Histidine phosphatase superfamily KHQ88_03730 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic KHQ88_03730 IPR017459 Glycosyl transferase family 3, N-terminal domain KHQ88_03730 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site KHQ88_03730 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase KHQ88_03730 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily KHQ88_03730 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily KHQ88_03730 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily KHQ88_03730 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal KHQ88_03730 IPR000312 Glycosyl transferase, family 3 KHQ88_03740 IPR036890 Histidine kinase/HSP90-like ATPase superfamily KHQ88_03740 IPR019805 Heat shock protein Hsp90, conserved site KHQ88_03740 IPR037196 HSP90, C-terminal domain KHQ88_03740 IPR001404 Heat shock protein Hsp90 family KHQ88_03740 IPR020568 Ribosomal protein S5 domain 2-type fold KHQ88_03740 IPR020575 Heat shock protein Hsp90, N-terminal KHQ88_03755 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain KHQ88_03755 IPR027302 Glutamine synthetase, N-terminal conserved site KHQ88_03755 IPR001637 Glutamine synthetase class-I, adenylation site KHQ88_03755 IPR004809 Glutamine synthetase type I KHQ88_03755 IPR027303 Glutamine synthetase, glycine-rich site KHQ88_03755 IPR008146 Glutamine synthetase, catalytic domain KHQ88_03755 IPR036651 Glutamine synthetase, N-terminal domain superfamily KHQ88_03755 IPR008147 Glutamine synthetase, beta-Grasp domain KHQ88_03760 IPR004612 Holliday junction resolvase RecU KHQ88_03760 IPR011856 tRNA endonuclease-like domain superfamily KHQ88_03760 IPR011335 Restriction endonuclease type II-like KHQ88_03765 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like KHQ88_03765 IPR001279 Metallo-beta-lactamase KHQ88_03765 IPR004613 Ribonuclease J KHQ88_03765 IPR042173 Ribonuclease J, domain 2 KHQ88_03765 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain KHQ88_03765 IPR041636 Ribonuclease J, C-terminal KHQ88_03765 IPR030854 Ribonuclease J, bacteria KHQ88_03770 IPR008254 Flavodoxin/nitric oxide synthase KHQ88_03770 IPR001226 Flavodoxin, conserved site KHQ88_03770 IPR029039 Flavoprotein-like superfamily KHQ88_03770 IPR001279 Metallo-beta-lactamase KHQ88_03770 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like KHQ88_03770 IPR016440 Rubredoxin-oxygen oxidoreductase KHQ88_03775 IPR001173 Glycosyltransferase 2-like KHQ88_03775 IPR029044 Nucleotide-diphospho-sugar transferases KHQ88_03775 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA KHQ88_03780 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal KHQ88_03780 IPR021886 MgsA AAA+ ATPase C-terminal KHQ88_03780 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_03780 IPR008824 RuvB-like P-loop domain KHQ88_03780 IPR003593 AAA+ ATPase domain KHQ88_03780 IPR032423 AAA C-terminal domain KHQ88_03790 IPR027474 L-asparaginase, N-terminal KHQ88_03790 IPR027473 L-asparaginase, C-terminal KHQ88_03790 IPR040919 Asparaginase/glutaminase, C-terminal KHQ88_03790 IPR027475 Asparaginase/glutaminase, active site 2 KHQ88_03790 IPR020827 Asparaginase/glutaminase, active site 1 KHQ88_03790 IPR006034 Asparaginase/glutaminase-like KHQ88_03790 IPR036152 Asparaginase/glutaminase-like superfamily KHQ88_03790 IPR004550 L-asparaginase, type II KHQ88_03790 IPR037152 L-asparaginase, N-terminal domain superfamily KHQ88_03795 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 KHQ88_03795 IPR000085 Bacterial DNA recombination protein RuvA KHQ88_03795 IPR010994 RuvA domain 2-like KHQ88_03795 IPR011114 Holliday junction DNA helicase RuvA, C-terminal KHQ88_03795 IPR036267 RuvA, C-terminal domain superfamily KHQ88_03795 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial KHQ88_03795 IPR012340 Nucleic acid-binding, OB-fold KHQ88_03800 IPR014100 GTP-binding protein Obg/CgtA KHQ88_03800 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily KHQ88_03800 IPR006074 GTP1/OBG, conserved site KHQ88_03800 IPR006169 GTP1/OBG domain KHQ88_03800 IPR036726 GTP1/OBG domain superfamily KHQ88_03800 IPR006073 GTP binding domain KHQ88_03800 IPR015349 GTP-binding protein OBG, C-terminal KHQ88_03800 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_03800 IPR035101 GTP-binding protein, Obg-type KHQ88_03800 IPR005225 Small GTP-binding protein domain KHQ88_03800 IPR031167 OBG-type guanine nucleotide-binding (G) domain KHQ88_03815 IPR018261 Ribosomal protein L27, conserved site KHQ88_03815 IPR001684 Ribosomal protein L27 KHQ88_03820 IPR036164 L21-like superfamily KHQ88_03820 IPR028909 Ribosomal protein L21-like KHQ88_03820 IPR001787 Ribosomal protein L21 KHQ88_03820 IPR018258 Ribosomal protein L21, conserved site KHQ88_03845 IPR004821 Cytidyltransferase-like domain KHQ88_03845 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold KHQ88_03845 IPR001980 Phosphopantetheine adenylyltransferase KHQ88_03850 IPR004398 RNA methyltransferase, RsmD KHQ88_03850 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase KHQ88_03855 IPR013815 ATP-grasp fold, subdomain 1 KHQ88_03855 IPR008279 PEP-utilising enzyme, mobile domain KHQ88_03855 IPR018274 PEP-utilising enzyme, active site KHQ88_03855 IPR000121 PEP-utilising enzyme, C-terminal KHQ88_03855 IPR023151 PEP-utilising enzyme, conserved site KHQ88_03855 IPR036637 Phosphohistidine domain superfamily KHQ88_03855 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding KHQ88_03855 IPR010121 Pyruvate, phosphate dikinase KHQ88_03855 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily KHQ88_03855 IPR040442 Pyruvate kinase-like domain superfamily KHQ88_03865 IPR003593 AAA+ ATPase domain KHQ88_03865 IPR017871 ABC transporter, conserved site KHQ88_03865 IPR003439 ABC transporter-like KHQ88_03865 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_03875 IPR011831 Glucose-1-phosphate adenylyltransferase KHQ88_03875 IPR005836 ADP-glucose pyrophosphorylase, conserved site KHQ88_03875 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial KHQ88_03875 IPR005835 Nucleotidyl transferase domain KHQ88_03875 IPR029044 Nucleotide-diphospho-sugar transferases KHQ88_03875 IPR011004 Trimeric LpxA-like superfamily KHQ88_03880 IPR001296 Glycosyl transferase, family 1 KHQ88_03880 IPR013534 Starch synthase, catalytic domain KHQ88_03880 IPR011835 Bacterial/plant glycogen synthase KHQ88_03885 IPR023214 HAD superfamily KHQ88_03885 IPR023299 P-type ATPase, cytoplasmic domain N KHQ88_03885 IPR018303 P-type ATPase, phosphorylation site KHQ88_03885 IPR023298 P-type ATPase, transmembrane domain superfamily KHQ88_03885 IPR008250 P-type ATPase, A domain superfamily KHQ88_03885 IPR036412 HAD-like superfamily KHQ88_03885 IPR001757 P-type ATPase KHQ88_03890 IPR000764 Uridine kinase-like KHQ88_03890 IPR006083 Phosphoribulokinase/uridine kinase KHQ88_03890 IPR026008 Uridine kinase KHQ88_03890 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_03920 IPR032688 ABC-2 family transporter protein KHQ88_03925 IPR003593 AAA+ ATPase domain KHQ88_03925 IPR003439 ABC transporter-like KHQ88_03925 IPR017871 ABC transporter, conserved site KHQ88_03925 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_03930 IPR035566 Ribosomal protein L20, C-terminal KHQ88_03930 IPR005813 Ribosomal protein L20 KHQ88_03935 IPR037229 Ribosomal protein L35 superfamily KHQ88_03935 IPR001706 Ribosomal protein L35, non-mitochondrial KHQ88_03935 IPR021137 Ribosomal protein L35 KHQ88_03940 IPR019814 Translation initiation factor 3, N-terminal KHQ88_03940 IPR019813 Translation initiation factor 3, conserved site KHQ88_03940 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily KHQ88_03940 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily KHQ88_03940 IPR019815 Translation initiation factor 3, C-terminal KHQ88_03940 IPR001288 Translation initiation factor 3 KHQ88_03945 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase KHQ88_03945 IPR038009 GlmU, C-terminal LbH domain KHQ88_03945 IPR001451 Hexapeptide repeat KHQ88_03945 IPR018357 Hexapeptide transferase, conserved site KHQ88_03945 IPR005835 Nucleotidyl transferase domain KHQ88_03945 IPR029044 Nucleotide-diphospho-sugar transferases KHQ88_03945 IPR011004 Trimeric LpxA-like superfamily KHQ88_03950 IPR006352 Phosphoglucosamine mutase, bacterial type KHQ88_03950 IPR005841 Alpha-D-phosphohexomutase superfamily KHQ88_03950 IPR016066 Alpha-D-phosphohexomutase, conserved site KHQ88_03950 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III KHQ88_03950 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II KHQ88_03950 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III KHQ88_03950 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I KHQ88_03950 IPR005843 Alpha-D-phosphohexomutase, C-terminal KHQ88_03950 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily KHQ88_03955 IPR017932 Glutamine amidotransferase type 2 domain KHQ88_03955 IPR035466 GlmS/AgaS, SIS domain 1 KHQ88_03955 IPR035490 GlmS/FrlB, SIS domain 2 KHQ88_03955 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising KHQ88_03955 IPR029055 Nucleophile aminohydrolases, N-terminal KHQ88_03955 IPR001347 Sugar isomerase (SIS) KHQ88_03965 IPR003593 AAA+ ATPase domain KHQ88_03965 IPR003439 ABC transporter-like KHQ88_03965 IPR017917 ABC transporter, arabinose import, ATP-binding protein, AraG KHQ88_03965 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_03965 IPR017871 ABC transporter, conserved site KHQ88_03985 IPR023382 Adenine nucleotide alpha hydrolase-like domains KHQ88_03985 IPR004506 tRNA-specific 2-thiouridylase KHQ88_03985 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold KHQ88_03990 IPR003010 Carbon-nitrogen hydrolase KHQ88_03990 IPR036526 Carbon-nitrogen hydrolase superfamily KHQ88_03990 IPR014445 Glutamine-dependent NAD(+) synthetase KHQ88_03990 IPR022310 NAD/GMP synthase KHQ88_03990 IPR003694 NAD(+) synthetase KHQ88_03990 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold KHQ88_03990 IPR041856 Glutamine-dependent NAD+ synthetase, C-terminal KHQ88_03995 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase KHQ88_03995 IPR004821 Cytidyltransferase-like domain KHQ88_03995 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold KHQ88_04000 IPR023367 Peptidase M42, domain 2 KHQ88_04000 IPR008007 Peptidase M42 KHQ88_04005 IPR020103 Pseudouridine synthase, catalytic domain superfamily KHQ88_04005 IPR006225 Pseudouridine synthase, RluC/RluD KHQ88_04005 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site KHQ88_04005 IPR006145 Pseudouridine synthase, RsuA/RluA KHQ88_04005 IPR002942 RNA-binding S4 domain KHQ88_04010 IPR007295 Domain of unknown function DUF402 KHQ88_04010 IPR035930 FomD-like superfamily KHQ88_04010 IPR016882 Uncharacterised protein family UPF0374 KHQ88_04015 IPR001537 tRNA/rRNA methyltransferase, SpoU type KHQ88_04015 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase KHQ88_04015 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal KHQ88_04015 IPR029028 Alpha/beta knot methyltransferases KHQ88_04020 IPR030881 DEAD-box ATP-dependent RNA helicase CshB KHQ88_04020 IPR011545 DEAD/DEAH box helicase domain KHQ88_04020 IPR014001 Helicase superfamily 1/2, ATP-binding domain KHQ88_04020 IPR001650 Helicase, C-terminal KHQ88_04020 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_04020 IPR014014 RNA helicase, DEAD-box type, Q motif KHQ88_04025 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase KHQ88_04035 IPR004604 DNA recombination/repair protein RecN KHQ88_04035 IPR038729 Rad50/SbcC-type AAA domain KHQ88_04035 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_04040 IPR033248 Transketolase, C-terminal domain KHQ88_04040 IPR005477 Deoxyxylulose-5-phosphate synthase KHQ88_04040 IPR029061 Thiamin diphosphate-binding fold KHQ88_04040 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II KHQ88_04040 IPR005475 Transketolase-like, pyrimidine-binding domain KHQ88_04040 IPR020826 Transketolase binding site KHQ88_04040 IPR005474 Transketolase, N-terminal KHQ88_04045 IPR003761 Exonuclease VII, small subunit KHQ88_04045 IPR037004 Exonuclease VII, small subunit superfamily KHQ88_04050 IPR003753 Exonuclease VII, large subunit KHQ88_04050 IPR020579 Exonuclease VII, large subunit, C-terminal KHQ88_04050 IPR025824 OB-fold nucleic acid binding domain KHQ88_04055 IPR011605 NusB antitermination factor KHQ88_04055 IPR035926 NusB-like superfamily KHQ88_04055 IPR006027 NusB/RsmB/TIM44 KHQ88_04070 IPR020922 dITP/XTP pyrophosphatase KHQ88_04070 IPR002637 Ham1-like protein KHQ88_04070 IPR029001 Inosine triphosphate pyrophosphatase-like KHQ88_04075 IPR036291 NAD(P)-binding domain superfamily KHQ88_04075 IPR006037 Regulator of K+ conductance, C-terminal KHQ88_04075 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily KHQ88_04075 IPR003148 Regulator of K+ conductance, N-terminal KHQ88_04085 IPR003594 Histidine kinase/HSP90-like ATPase KHQ88_04085 IPR003660 HAMP domain KHQ88_04085 IPR029151 Periplasmic sensor-like domain superfamily KHQ88_04085 IPR036890 Histidine kinase/HSP90-like ATPase superfamily KHQ88_04085 IPR005467 Histidine kinase domain KHQ88_04085 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain KHQ88_04085 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily KHQ88_04085 IPR000014 PAS domain KHQ88_04085 IPR000700 PAS-associated, C-terminal KHQ88_04085 IPR035965 PAS domain superfamily KHQ88_04085 IPR004358 Signal transduction histidine kinase-related protein, C-terminal KHQ88_04090 IPR016032 Signal transduction response regulator, C-terminal effector KHQ88_04090 IPR011006 CheY-like superfamily KHQ88_04090 IPR001867 OmpR/PhoB-type DNA-binding domain KHQ88_04090 IPR039420 Transcriptional regulatory protein WalR-like KHQ88_04090 IPR036388 Winged helix-like DNA-binding domain superfamily KHQ88_04090 IPR001789 Signal transduction response regulator, receiver domain KHQ88_04095 IPR038078 PhoU-like domain superfamily KHQ88_04095 IPR026022 PhoU domain KHQ88_04095 IPR028366 Phosphate transport system protein PhoU KHQ88_04100 IPR003593 AAA+ ATPase domain KHQ88_04100 IPR003439 ABC transporter-like KHQ88_04100 IPR017871 ABC transporter, conserved site KHQ88_04100 IPR015850 ABC transporter, phosphate import, PstB KHQ88_04100 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_04100 IPR005670 Phosphate transport system permease protein 1 KHQ88_04105 IPR000515 ABC transporter type 1, transmembrane domain MetI-like KHQ88_04105 IPR035906 MetI-like superfamily KHQ88_04105 IPR005672 Phosphate transport system permease protein PstA KHQ88_04110 IPR000515 ABC transporter type 1, transmembrane domain MetI-like KHQ88_04110 IPR035906 MetI-like superfamily KHQ88_04110 IPR011864 Phosphate ABC transporter, permease protein PstC KHQ88_04115 IPR011862 Phosphate binding protein KHQ88_04115 IPR024370 PBP domain KHQ88_04120 IPR000119 Histone-like DNA-binding protein KHQ88_04120 IPR020816 Histone-like DNA-binding protein, conserved site KHQ88_04120 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily KHQ88_04125 IPR031166 EngA-type guanine nucleotide-binding (G) domain KHQ88_04125 IPR016484 GTP-binding protein EngA KHQ88_04125 IPR006073 GTP binding domain KHQ88_04125 IPR032859 GTPase Der, C-terminal KH-domain-like KHQ88_04125 IPR015946 K homology domain-like, alpha/beta KHQ88_04125 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_04125 IPR005225 Small GTP-binding protein domain KHQ88_04130 IPR012340 Nucleic acid-binding, OB-fold KHQ88_04130 IPR022967 RNA-binding domain, S1 KHQ88_04130 IPR003029 S1 domain KHQ88_04135 IPR003136 Cytidylate kinase KHQ88_04135 IPR011994 Cytidylate kinase domain KHQ88_04135 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_04140 IPR002942 RNA-binding S4 domain KHQ88_04140 IPR036986 RNA-binding S4 domain superfamily KHQ88_04140 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site KHQ88_04140 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F KHQ88_04140 IPR006145 Pseudouridine synthase, RsuA/RluA KHQ88_04140 IPR020103 Pseudouridine synthase, catalytic domain superfamily KHQ88_04140 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain KHQ88_04145 IPR005170 Transporter-associated domain KHQ88_04145 IPR016169 FAD-binding, type PCMH, subdomain 2 KHQ88_04145 IPR036318 FAD-binding, type PCMH-like superfamily KHQ88_04145 IPR002550 CNNM, transmembrane domain KHQ88_04145 IPR000644 CBS domain KHQ88_04150 IPR001059 Translation elongation factor P/YeiP, central KHQ88_04150 IPR015365 Elongation factor P, C-terminal KHQ88_04150 IPR012340 Nucleic acid-binding, OB-fold KHQ88_04150 IPR013185 Translation elongation factor, KOW-like KHQ88_04150 IPR014722 Ribosomal protein L2, domain 2 KHQ88_04150 IPR020599 Translation elongation factor P/YeiP KHQ88_04150 IPR013852 Translation elongation factor P/YeiP, conserved site KHQ88_04150 IPR011768 Translation elongation factor P KHQ88_04150 IPR008991 Translation protein SH3-like domain superfamily KHQ88_04160 IPR039657 Dimethylallyltransferase KHQ88_04160 IPR018022 IPP transferase KHQ88_04160 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_04165 IPR014790 MutL, C-terminal, dimerisation KHQ88_04165 IPR036890 Histidine kinase/HSP90-like ATPase superfamily KHQ88_04165 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms KHQ88_04165 IPR020667 DNA mismatch repair protein, MutL KHQ88_04165 IPR042120 MutL, C-terminal domain, dimerisation subdomain KHQ88_04165 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup KHQ88_04165 IPR037198 MutL, C-terminal domain superfamily KHQ88_04165 IPR020568 Ribosomal protein S5 domain 2-type fold KHQ88_04165 IPR013507 DNA mismatch repair protein, S5 domain 2-like KHQ88_04165 IPR014762 DNA mismatch repair, conserved site KHQ88_04165 IPR042121 MutL, C-terminal domain, regulatory subdomain KHQ88_04165 IPR002099 DNA mismatch repair protein family, N-terminal KHQ88_04170 IPR017261 DNA mismatch repair protein MutS/MSH KHQ88_04170 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_04170 IPR036678 MutS, connector domain superfamily KHQ88_04170 IPR007860 DNA mismatch repair protein MutS, connector domain KHQ88_04170 IPR016151 DNA mismatch repair protein MutS, N-terminal KHQ88_04170 IPR005748 DNA mismatch repair protein MutS KHQ88_04170 IPR007861 DNA mismatch repair protein MutS, clamp KHQ88_04170 IPR000432 DNA mismatch repair protein MutS, C-terminal KHQ88_04170 IPR007695 DNA mismatch repair protein MutS-like, N-terminal KHQ88_04170 IPR007696 DNA mismatch repair protein MutS, core KHQ88_04170 IPR036187 DNA mismatch repair protein MutS, core domain superfamily KHQ88_04180 IPR007197 Radical SAM KHQ88_04180 IPR006638 Elp3/MiaB/NifB KHQ88_04180 IPR005839 Methylthiotransferase KHQ88_04180 IPR013848 Methylthiotransferase, N-terminal KHQ88_04180 IPR038135 Methylthiotransferase, N-terminal domain superfamily KHQ88_04180 IPR020612 Methylthiotransferase, conserved site KHQ88_04180 IPR023404 Radical SAM, alpha/beta horseshoe KHQ88_04180 IPR002792 TRAM domain KHQ88_04180 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB KHQ88_04185 IPR029052 Metallo-dependent phosphatase-like KHQ88_04185 IPR005235 Metallophosphoesterase, YmdB-like KHQ88_04195 IPR006674 HD domain KHQ88_04195 IPR022711 Ribonuclease Y, N-terminal KHQ88_04195 IPR006675 HDIG domain KHQ88_04195 IPR004087 K Homology domain KHQ88_04195 IPR004088 K Homology domain, type 1 KHQ88_04195 IPR036612 K Homology domain, type 1 superfamily KHQ88_04195 IPR017705 Ribonuclease Y KHQ88_04195 IPR003607 HD/PDEase domain KHQ88_04200 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain KHQ88_04200 IPR023400 DNA recombination and repair protein RecA, C-terminal KHQ88_04200 IPR003593 AAA+ ATPase domain KHQ88_04200 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_04200 IPR020584 DNA recombination/repair protein RecA, conserved site KHQ88_04200 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface KHQ88_04200 IPR013765 DNA recombination and repair protein RecA KHQ88_04205 IPR000462 CDP-alcohol phosphatidyltransferase KHQ88_04205 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase KHQ88_04210 IPR017856 Integrase-like, N-terminal KHQ88_04210 IPR002876 Transcriptional regulator TACO1-like KHQ88_04210 IPR026564 Transcriptional regulator TACO1-like, domain 3 KHQ88_04210 IPR029072 YebC-like KHQ88_04215 IPR036388 Winged helix-like DNA-binding domain superfamily KHQ88_04215 IPR003029 S1 domain KHQ88_04215 IPR040764 Conserved virulence factor B-like, winged helix domain KHQ88_04215 IPR012340 Nucleic acid-binding, OB-fold KHQ88_04215 IPR039566 Conserved virulence factor B, S1 domain KHQ88_04215 IPR022967 RNA-binding domain, S1 KHQ88_04215 IPR014464 Conserved virulence factor B KHQ88_04225 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site KHQ88_04225 IPR036264 Bacterial exopeptidase dimerisation domain KHQ88_04225 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria KHQ88_04225 IPR011650 Peptidase M20, dimerisation domain KHQ88_04225 IPR002933 Peptidase M20 KHQ88_04250 IPR014152 DNA helicase subunit AddA KHQ88_04250 IPR014017 UvrD-like DNA helicase, C-terminal KHQ88_04250 IPR000212 DNA helicase, UvrD/REP type KHQ88_04250 IPR011604 Exonuclease, phage-type/RecB, C-terminal KHQ88_04250 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_04250 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type KHQ88_04250 IPR011335 Restriction endonuclease type II-like KHQ88_04250 IPR014016 UvrD-like helicase, ATP-binding domain KHQ88_04250 IPR034739 UvrD/AddA helicase, N-terminal KHQ88_04260 IPR000917 Sulfatase, N-terminal KHQ88_04260 IPR012160 Lipoteichoic acid synthase-like KHQ88_04260 IPR017850 Alkaline-phosphatase-like, core domain superfamily KHQ88_04265 IPR002068 Alpha crystallin/Hsp20 domain KHQ88_04265 IPR031107 Small heat shock protein HSP20 KHQ88_04265 IPR008978 HSP20-like chaperone KHQ88_04270 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme KHQ88_04270 IPR005859 Cysteine synthase CysK KHQ88_04270 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site KHQ88_04270 IPR005856 Cysteine synthase KHQ88_04270 IPR001926 Pyridoxal-phosphate dependent enzyme KHQ88_04275 IPR001451 Hexapeptide repeat KHQ88_04275 IPR011004 Trimeric LpxA-like superfamily KHQ88_04275 IPR042122 Serine acetyltransferase, N-terminal domain superfamily KHQ88_04285 IPR000192 Aminotransferase class V domain KHQ88_04285 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site KHQ88_04285 IPR010240 Cysteine desulfurase IscS KHQ88_04285 IPR017772 Cysteine desulfurase NifS, bacterial/archaeal KHQ88_04285 IPR016454 Cysteine desulfurase KHQ88_04285 IPR015424 Pyridoxal phosphate-dependent transferase KHQ88_04285 IPR015421 Pyridoxal phosphate-dependent transferase, major domain KHQ88_04285 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 KHQ88_04295 IPR036188 FAD/NAD(P)-binding domain superfamily KHQ88_04295 IPR023753 FAD/NAD(P)-binding domain KHQ88_04295 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily KHQ88_04295 IPR006258 Dihydrolipoamide dehydrogenase KHQ88_04295 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I KHQ88_04295 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KHQ88_04295 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site KHQ88_04300 IPR018368 ClpA/B, conserved site 1 KHQ88_04300 IPR003959 ATPase, AAA-type, core KHQ88_04300 IPR003593 AAA+ ATPase domain KHQ88_04300 IPR019489 Clp ATPase, C-terminal KHQ88_04300 IPR036628 Clp, N-terminal domain superfamily KHQ88_04300 IPR004176 Clp, N-terminal KHQ88_04300 IPR001270 ClpA/B family KHQ88_04300 IPR028299 ClpA/B, conserved site 2 KHQ88_04300 IPR041546 ClpA/ClpB, AAA lid domain KHQ88_04300 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_04300 IPR017730 Chaperonin ClpB KHQ88_04305 IPR035965 PAS domain superfamily KHQ88_04305 IPR000160 GGDEF domain KHQ88_04305 IPR005330 MHYT domain KHQ88_04305 IPR029787 Nucleotide cyclase KHQ88_04305 IPR001633 EAL domain KHQ88_04305 IPR035919 EAL domain superfamily KHQ88_04310 IPR029787 Nucleotide cyclase KHQ88_04310 IPR016132 Phytochrome chromophore attachment domain KHQ88_04310 IPR013515 Phytochrome, central region KHQ88_04310 IPR001633 EAL domain KHQ88_04310 IPR029016 GAF-like domain superfamily KHQ88_04310 IPR003018 GAF domain KHQ88_04310 IPR001294 Phytochrome KHQ88_04310 IPR000160 GGDEF domain KHQ88_04310 IPR035919 EAL domain superfamily KHQ88_04315 IPR036019 Gated mechanosensitive channel KHQ88_04315 IPR001185 Large-conductance mechanosensitive channel KHQ88_04315 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L KHQ88_04320 IPR024922 Rubredoxin KHQ88_04320 IPR024934 Rubredoxin-like domain KHQ88_04320 IPR024935 Rubredoxin domain KHQ88_04320 IPR018527 Rubredoxin, iron-binding site KHQ88_04345 IPR036388 Winged helix-like DNA-binding domain superfamily KHQ88_04345 IPR013324 RNA polymerase sigma factor, region 3/4-like KHQ88_04345 IPR013325 RNA polymerase sigma factor, region 2 KHQ88_04345 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site KHQ88_04345 IPR007627 RNA polymerase sigma-70 region 2 KHQ88_04345 IPR014284 RNA polymerase sigma-70 like domain KHQ88_04345 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 KHQ88_04345 IPR039425 RNA polymerase sigma-70 like KHQ88_04360 IPR021354 Protein of unknown function DUF2975 KHQ88_04365 IPR014922 Domain of unknown function DUF1801 KHQ88_04390 IPR011493 GLUG KHQ88_04390 IPR013378 Listeria/Bacterioides repeat KHQ88_04390 IPR042229 Listeria-Bacteroides repeat domain superfamily KHQ88_04405 IPR001789 Signal transduction response regulator, receiver domain KHQ88_04405 IPR037522 HD-GYP domain KHQ88_04405 IPR003607 HD/PDEase domain KHQ88_04405 IPR011006 CheY-like superfamily KHQ88_04410 IPR003797 DegV KHQ88_04420 IPR036852 Peptidase S8/S53 domain superfamily KHQ88_04420 IPR000209 Peptidase S8/S53 domain KHQ88_04420 IPR022398 Peptidase S8, subtilisin, His-active site KHQ88_04420 IPR023828 Peptidase S8, subtilisin, Ser-active site KHQ88_04420 IPR015500 Peptidase S8, subtilisin-related KHQ88_04420 IPR034084 Thermitase-like, domain KHQ88_04420 IPR023827 Peptidase S8, subtilisin, Asp-active site KHQ88_04445 IPR025875 Leucine rich repeat 4 KHQ88_04445 IPR001611 Leucine-rich repeat KHQ88_04445 IPR014756 Immunoglobulin E-set KHQ88_04445 IPR013783 Immunoglobulin-like fold KHQ88_04445 IPR003591 Leucine-rich repeat, typical subtype KHQ88_04445 IPR035986 PKD domain superfamily KHQ88_04445 IPR009459 MucBP domain KHQ88_04445 IPR032675 Leucine-rich repeat domain superfamily KHQ88_04445 IPR012569 Leucine-rich repeat-containing adjacent domain KHQ88_04445 IPR019931 LPXTG cell wall anchor domain KHQ88_04450 IPR013785 Aldolase-type TIM barrel KHQ88_04450 IPR004136 Nitronate monooxygenase KHQ88_04455 IPR002071 Thermonuclease active site KHQ88_04455 IPR035437 SNase-like, OB-fold superfamily KHQ88_04455 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold KHQ88_04470 IPR001972 Stomatin family KHQ88_04470 IPR001107 Band 7 domain KHQ88_04470 IPR036013 Band 7/SPFH domain superfamily KHQ88_04470 IPR018080 Band 7/stomatin-like, conserved site KHQ88_04470 IPR032435 Band 7, C-terminal extension KHQ88_04475 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site KHQ88_04475 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_04475 IPR001650 Helicase, C-terminal KHQ88_04475 IPR014014 RNA helicase, DEAD-box type, Q motif KHQ88_04475 IPR014001 Helicase superfamily 1/2, ATP-binding domain KHQ88_04475 IPR028622 ATP-dependent RNA helicase RhlE KHQ88_04475 IPR011545 DEAD/DEAH box helicase domain KHQ88_04500 IPR013974 SAF domain KHQ88_04500 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal KHQ88_04500 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily KHQ88_04500 IPR013785 Aldolase-type TIM barrel KHQ88_04500 IPR020030 Pseudaminic acid biosynthesis, PseI KHQ88_04500 IPR013132 N-acetylneuraminic acid synthase, N-terminal KHQ88_04505 IPR029044 Nucleotide-diphospho-sugar transferases KHQ88_04505 IPR003329 Acylneuraminate cytidylyltransferase KHQ88_04505 IPR020039 Pseudaminic acid cytidylyltransferase KHQ88_04510 IPR003329 Acylneuraminate cytidylyltransferase KHQ88_04510 IPR029044 Nucleotide-diphospho-sugar transferases KHQ88_04515 IPR015421 Pyridoxal phosphate-dependent transferase, major domain KHQ88_04515 IPR015424 Pyridoxal phosphate-dependent transferase KHQ88_04515 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase KHQ88_04515 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 KHQ88_04520 IPR036291 NAD(P)-binding domain superfamily KHQ88_04520 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain KHQ88_04520 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) KHQ88_04540 IPR036291 NAD(P)-binding domain superfamily KHQ88_04540 IPR001509 NAD-dependent epimerase/dehydratase KHQ88_04545 IPR001173 Glycosyltransferase 2-like KHQ88_04545 IPR029044 Nucleotide-diphospho-sugar transferases KHQ88_04555 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal KHQ88_04555 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily KHQ88_04555 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation KHQ88_04555 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal KHQ88_04555 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type KHQ88_04555 IPR017476 UDP-glucose/GDP-mannose dehydrogenase KHQ88_04555 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily KHQ88_04555 IPR036291 NAD(P)-binding domain superfamily KHQ88_04565 IPR003362 Bacterial sugar transferase KHQ88_04570 IPR015424 Pyridoxal phosphate-dependent transferase KHQ88_04570 IPR015421 Pyridoxal phosphate-dependent transferase, major domain KHQ88_04570 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 KHQ88_04570 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase KHQ88_04580 IPR023733 Pyrophosphatase PpaX KHQ88_04580 IPR023198 Phosphoglycolate phosphatase-like, domain 2 KHQ88_04580 IPR023214 HAD superfamily KHQ88_04580 IPR041492 Haloacid dehalogenase-like hydrolase KHQ88_04580 IPR006439 HAD hydrolase, subfamily IA KHQ88_04580 IPR036412 HAD-like superfamily KHQ88_04585 IPR016185 Pre-ATP-grasp domain superfamily KHQ88_04585 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KHQ88_04585 IPR005905 D-alanine--D-alanine ligase KHQ88_04585 IPR011761 ATP-grasp fold KHQ88_04585 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KHQ88_04585 IPR013815 ATP-grasp fold, subdomain 1 KHQ88_04585 IPR011095 D-alanine--D-alanine ligase, C-terminal KHQ88_04610 IPR036390 Winged helix DNA-binding domain superfamily KHQ88_04610 IPR036388 Winged helix-like DNA-binding domain superfamily KHQ88_04610 IPR000524 Transcription regulator HTH, GntR KHQ88_04610 IPR028082 Periplasmic binding protein-like I KHQ88_04610 IPR033532 Arabinose metabolism transcriptional repressor, ligand-binding domain KHQ88_04620 IPR003439 ABC transporter-like KHQ88_04620 IPR003593 AAA+ ATPase domain KHQ88_04620 IPR017871 ABC transporter, conserved site KHQ88_04620 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_04625 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site KHQ88_04625 IPR011877 Ribokinase KHQ88_04625 IPR011611 Carbohydrate kinase PfkB KHQ88_04625 IPR002139 Ribokinase/fructokinase KHQ88_04625 IPR029056 Ribokinase-like KHQ88_04640 IPR006083 Phosphoribulokinase/uridine kinase KHQ88_04640 IPR003593 AAA+ ATPase domain KHQ88_04640 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_04640 IPR026008 Uridine kinase KHQ88_04640 IPR000764 Uridine kinase-like KHQ88_04645 IPR037294 ABC transporter, BtuC-like KHQ88_04645 IPR000522 ABC transporter, permease protein, BtuC-like KHQ88_04650 IPR037294 ABC transporter, BtuC-like KHQ88_04650 IPR000522 ABC transporter, permease protein, BtuC-like KHQ88_04655 IPR002491 ABC transporter periplasmic binding domain KHQ88_04660 IPR003593 AAA+ ATPase domain KHQ88_04660 IPR003439 ABC transporter-like KHQ88_04660 IPR017871 ABC transporter, conserved site KHQ88_04660 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_04670 IPR041679 DNA2/NAM7 helicase-like, AAA domain KHQ88_04670 IPR041677 DNA2/NAM7 helicase, AAA domain KHQ88_04670 IPR025103 Protein of unknown function DUF4011 KHQ88_04670 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_04675 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KHQ88_04675 IPR023753 FAD/NAD(P)-binding domain KHQ88_04675 IPR036188 FAD/NAD(P)-binding domain superfamily KHQ88_04675 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily KHQ88_04675 IPR023536 Coenzyme A disulphide reductase, staphyolococci KHQ88_04675 IPR017758 Coenzyme A disulphide reductase KHQ88_04680 IPR000891 Pyruvate carboxyltransferase KHQ88_04680 IPR005776 Oxaloacetate decarboxylase, alpha subunit KHQ88_04680 IPR013785 Aldolase-type TIM barrel KHQ88_04680 IPR001882 Biotin-binding site KHQ88_04680 IPR011053 Single hybrid motif KHQ88_04680 IPR000089 Biotin/lipoyl attachment KHQ88_04680 IPR003379 Carboxylase, conserved domain KHQ88_04690 IPR001249 Acetyl-CoA biotin carboxyl carrier KHQ88_04690 IPR001882 Biotin-binding site KHQ88_04690 IPR000089 Biotin/lipoyl attachment KHQ88_04690 IPR011053 Single hybrid motif KHQ88_04695 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit KHQ88_04710 IPR000060 BCCT transporter family KHQ88_04720 IPR013785 Aldolase-type TIM barrel KHQ88_04720 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase KHQ88_04720 IPR007197 Radical SAM KHQ88_04725 IPR002481 Ferric-uptake regulator KHQ88_04725 IPR036388 Winged helix-like DNA-binding domain superfamily KHQ88_04725 IPR036390 Winged helix DNA-binding domain superfamily KHQ88_04730 IPR037294 ABC transporter, BtuC-like KHQ88_04730 IPR001626 ABC transporter, TroCD-like KHQ88_04735 IPR003593 AAA+ ATPase domain KHQ88_04735 IPR003439 ABC transporter-like KHQ88_04735 IPR017871 ABC transporter, conserved site KHQ88_04735 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_04740 IPR006127 Periplasmic solute binding protein, ZnuA-like KHQ88_04740 IPR006129 Adhesin B KHQ88_04740 IPR006128 Adhesion lipoprotein KHQ88_04760 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain KHQ88_04760 IPR000515 ABC transporter type 1, transmembrane domain MetI-like KHQ88_04760 IPR035906 MetI-like superfamily KHQ88_04765 IPR003593 AAA+ ATPase domain KHQ88_04765 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type KHQ88_04765 IPR003439 ABC transporter-like KHQ88_04765 IPR017871 ABC transporter, conserved site KHQ88_04765 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_04775 IPR012226 Diguanylate cyclase/phosphodiesterase KHQ88_04775 IPR035919 EAL domain superfamily KHQ88_04775 IPR000160 GGDEF domain KHQ88_04775 IPR029787 Nucleotide cyclase KHQ88_04775 IPR001610 PAC motif KHQ88_04775 IPR000014 PAS domain KHQ88_04775 IPR000700 PAS-associated, C-terminal KHQ88_04775 IPR035965 PAS domain superfamily KHQ88_04775 IPR001633 EAL domain KHQ88_04780 IPR011245 Butyrate kinase KHQ88_04780 IPR000890 Aliphatic acid kinase, short-chain KHQ88_04780 IPR023865 Aliphatic acid kinase, short-chain, conserved site KHQ88_04785 IPR012147 Phosphate acetyl/butyryltransferase KHQ88_04785 IPR014079 Phosphate butyryltransferase KHQ88_04785 IPR002505 Phosphate acetyl/butaryl transferase KHQ88_04815 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily KHQ88_04815 IPR013328 6-phosphogluconate dehydrogenase, domain 2 KHQ88_04815 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent KHQ88_04815 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal KHQ88_04815 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal KHQ88_04815 IPR036291 NAD(P)-binding domain superfamily KHQ88_04820 IPR007346 Endonuclease I KHQ88_04830 IPR019629 Uncharacterised protein family HI1736/YgjV KHQ88_04845 IPR015946 K homology domain-like, alpha/beta KHQ88_04845 IPR003718 OsmC/Ohr family KHQ88_04845 IPR036102 OsmC/Ohr superfamily KHQ88_04850 IPR016161 Aldehyde/histidinol dehydrogenase KHQ88_04850 IPR016163 Aldehyde dehydrogenase, C-terminal KHQ88_04850 IPR016160 Aldehyde dehydrogenase, cysteine active site KHQ88_04850 IPR029510 Aldehyde dehydrogenase, glutamic acid active site KHQ88_04850 IPR016162 Aldehyde dehydrogenase, N-terminal KHQ88_04850 IPR005932 1-pyrroline-5-carboxylate dehydrogenase KHQ88_04850 IPR015590 Aldehyde dehydrogenase domain KHQ88_04855 IPR012727 Glycine oxidase ThiO KHQ88_04855 IPR036188 FAD/NAD(P)-binding domain superfamily KHQ88_04855 IPR006076 FAD dependent oxidoreductase KHQ88_04860 IPR023753 FAD/NAD(P)-binding domain KHQ88_04860 IPR036188 FAD/NAD(P)-binding domain superfamily KHQ88_04860 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily KHQ88_04860 IPR007419 BFD-like [2Fe-2S]-binding domain KHQ88_04860 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B KHQ88_04870 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 KHQ88_04870 IPR041117 SoxA, A3 domain KHQ88_04870 IPR006277 Sarcosine oxidase, alpha subunit KHQ88_04870 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal KHQ88_04870 IPR006222 Aminomethyltransferase, folate-binding domain KHQ88_04870 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KHQ88_04870 IPR023753 FAD/NAD(P)-binding domain KHQ88_04870 IPR036188 FAD/NAD(P)-binding domain superfamily KHQ88_04870 IPR042204 2Fe-2S iron-sulfur cluster binding domain, N-terminal KHQ88_04870 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily KHQ88_04880 IPR036388 Winged helix-like DNA-binding domain superfamily KHQ88_04880 IPR000524 Transcription regulator HTH, GntR KHQ88_04880 IPR015421 Pyridoxal phosphate-dependent transferase, major domain KHQ88_04880 IPR015424 Pyridoxal phosphate-dependent transferase KHQ88_04880 IPR004839 Aminotransferase, class I/classII KHQ88_04880 IPR036390 Winged helix DNA-binding domain superfamily KHQ88_04885 IPR013785 Aldolase-type TIM barrel KHQ88_04885 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ KHQ88_04885 IPR033755 PdxS/SNZ N-terminal domain KHQ88_04885 IPR011060 Ribulose-phosphate binding barrel KHQ88_04890 IPR021196 PdxT/SNO family, conserved site KHQ88_04890 IPR029062 Class I glutamine amidotransferase-like KHQ88_04890 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO KHQ88_04895 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KHQ88_04895 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal KHQ88_04895 IPR011079 Alanine racemase, C-terminal KHQ88_04895 IPR001608 Alanine racemase, N-terminal KHQ88_04895 IPR029066 PLP-binding barrel KHQ88_04895 IPR000821 Alanine racemase KHQ88_04900 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm KHQ88_04900 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily KHQ88_04900 IPR015866 Serine-tRNA synthetase, type1, N-terminal KHQ88_04900 IPR006195 Aminoacyl-tRNA synthetase, class II KHQ88_04900 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) KHQ88_04900 IPR002317 Serine-tRNA ligase, type1 KHQ88_04905 IPR002528 Multi antimicrobial extrusion protein KHQ88_04920 IPR022953 ATP-dependent 6-phosphofructokinase KHQ88_04920 IPR000023 Phosphofructokinase domain KHQ88_04920 IPR035966 Phosphofructokinase superfamily KHQ88_04920 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 KHQ88_04930 IPR015421 Pyridoxal phosphate-dependent transferase, major domain KHQ88_04930 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 KHQ88_04930 IPR015424 Pyridoxal phosphate-dependent transferase KHQ88_04930 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type KHQ88_04930 IPR004839 Aminotransferase, class I/classII KHQ88_04930 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type KHQ88_04930 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site KHQ88_04935 IPR013149 Alcohol dehydrogenase, C-terminal KHQ88_04935 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site KHQ88_04935 IPR011032 GroES-like superfamily KHQ88_04935 IPR004627 L-threonine 3-dehydrogenase KHQ88_04935 IPR036291 NAD(P)-binding domain superfamily KHQ88_04935 IPR020843 Polyketide synthase, enoylreductase domain KHQ88_04935 IPR013154 Alcohol dehydrogenase, N-terminal KHQ88_04950 IPR017871 ABC transporter, conserved site KHQ88_04950 IPR025302 Domain of unknown function DUF4162 KHQ88_04950 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_04950 IPR003439 ABC transporter-like KHQ88_04950 IPR003593 AAA+ ATPase domain KHQ88_04965 IPR022930 Protein of unknown function UPF0316 KHQ88_04965 IPR019264 Domain of unknown function DUF2179 KHQ88_04970 IPR017850 Alkaline-phosphatase-like, core domain superfamily KHQ88_04970 IPR012160 Lipoteichoic acid synthase-like KHQ88_04970 IPR000917 Sulfatase, N-terminal KHQ88_04975 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit KHQ88_04975 IPR036928 Amidase signature (AS) superfamily KHQ88_04975 IPR023631 Amidase signature domain KHQ88_04975 IPR000120 Amidase KHQ88_04975 IPR020556 Amidase, conserved site KHQ88_04985 IPR017953 Carbohydrate kinase, predicted, conserved site KHQ88_04985 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr KHQ88_04985 IPR029056 Ribokinase-like KHQ88_04985 IPR036652 YjeF N-terminal domain superfamily KHQ88_04985 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase KHQ88_04985 IPR004443 YjeF N-terminal domain KHQ88_04990 IPR009164 Fructose-1,6-bisphosphatase class 3 KHQ88_05010 IPR003593 AAA+ ATPase domain KHQ88_05010 IPR003439 ABC transporter-like KHQ88_05010 IPR017871 ABC transporter, conserved site KHQ88_05010 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal KHQ88_05010 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_05015 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal KHQ88_05015 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal KHQ88_05015 IPR017871 ABC transporter, conserved site KHQ88_05015 IPR003439 ABC transporter-like KHQ88_05015 IPR003593 AAA+ ATPase domain KHQ88_05015 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_05015 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_05015 IPR017871 ABC transporter, conserved site KHQ88_05015 IPR003439 ABC transporter-like KHQ88_05015 IPR003593 AAA+ ATPase domain KHQ88_05020 IPR000515 ABC transporter type 1, transmembrane domain MetI-like KHQ88_05020 IPR025966 Oligopeptide transport permease C-like, N-terminal domain KHQ88_05020 IPR035906 MetI-like superfamily KHQ88_05025 IPR000515 ABC transporter type 1, transmembrane domain MetI-like KHQ88_05025 IPR035906 MetI-like superfamily KHQ88_05050 IPR004131 Pyrophosphate-energised proton pump KHQ88_05060 IPR008331 Ferritin/DPS protein domain KHQ88_05060 IPR009078 Ferritin-like superfamily KHQ88_05060 IPR041719 Ferritin, prokaryotic-type KHQ88_05060 IPR009040 Ferritin-like diiron domain KHQ88_05060 IPR012347 Ferritin-like KHQ88_05060 IPR001519 Ferritin KHQ88_05095 IPR007229 Nicotinate phosphoribosyltransferase family KHQ88_05095 IPR013785 Aldolase-type TIM barrel KHQ88_05095 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase KHQ88_05095 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal KHQ88_05095 IPR006405 Nicotinate phosphoribosyltransferase pncB-type KHQ88_05095 IPR041619 Nicotinate phosphoribosyltransferase C-terminal domain KHQ88_05095 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain KHQ88_05105 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily KHQ88_05105 IPR001189 Manganese/iron superoxide dismutase KHQ88_05105 IPR019833 Manganese/iron superoxide dismutase, binding site KHQ88_05105 IPR019832 Manganese/iron superoxide dismutase, C-terminal KHQ88_05105 IPR019831 Manganese/iron superoxide dismutase, N-terminal KHQ88_05105 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily KHQ88_05110 IPR005744 Hly-III KHQ88_05110 IPR004254 AdipoR/Haemolysin-III-related KHQ88_05120 IPR004785 Ribose 5-phosphate isomerase B KHQ88_05120 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily KHQ88_05120 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family KHQ88_05125 IPR003439 ABC transporter-like KHQ88_05125 IPR017871 ABC transporter, conserved site KHQ88_05125 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_05125 IPR003593 AAA+ ATPase domain KHQ88_05125 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type KHQ88_05130 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain KHQ88_05130 IPR000515 ABC transporter type 1, transmembrane domain MetI-like KHQ88_05130 IPR035906 MetI-like superfamily KHQ88_05135 IPR001320 Ionotropic glutamate receptor KHQ88_05135 IPR018313 Solute-binding protein family 3, conserved site KHQ88_05135 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF KHQ88_05140 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain KHQ88_05140 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site KHQ88_05140 IPR009051 Alpha-helical ferredoxin KHQ88_05140 IPR004453 Epoxyqueuosine reductase QueG KHQ88_05140 IPR013542 Domain of unknown function DUF1730 KHQ88_05165 IPR002563 Flavin reductase like domain KHQ88_05165 IPR008254 Flavodoxin/nitric oxide synthase KHQ88_05165 IPR029039 Flavoprotein-like superfamily KHQ88_05165 IPR001279 Metallo-beta-lactamase KHQ88_05165 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like KHQ88_05165 IPR012349 FMN-binding split barrel KHQ88_05190 IPR004808 AP endonuclease 1 KHQ88_05190 IPR020847 AP endonuclease 1, binding site KHQ88_05190 IPR020848 AP endonuclease 1, conserved site KHQ88_05190 IPR036691 Endonuclease/exonuclease/phosphatase superfamily KHQ88_05190 IPR005135 Endonuclease/exonuclease/phosphatase KHQ88_05195 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal KHQ88_05195 IPR003740 Uncharacterised membrane protein YitT KHQ88_05195 IPR019264 Domain of unknown function DUF2179 KHQ88_05205 IPR003593 AAA+ ATPase domain KHQ88_05205 IPR003439 ABC transporter-like KHQ88_05205 IPR017871 ABC transporter, conserved site KHQ88_05205 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_05215 IPR001204 Phosphate transporter KHQ88_05240 IPR013216 Methyltransferase type 11 KHQ88_05240 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase KHQ88_05240 IPR023553 Uncharacterised methyltransferase, YrrT KHQ88_05245 IPR012337 Ribonuclease H-like superfamily KHQ88_05245 IPR036397 Ribonuclease H superfamily KHQ88_05245 IPR025948 HTH-like domain KHQ88_05245 IPR001584 Integrase, catalytic core KHQ88_05255 IPR002524 Cation efflux protein KHQ88_05255 IPR036837 Cation efflux protein, cytoplasmic domain superfamily KHQ88_05255 IPR027469 Cation efflux transmembrane domain superfamily KHQ88_05255 IPR027470 Cation efflux protein, cytoplasmic domain KHQ88_05265 IPR023299 P-type ATPase, cytoplasmic domain N KHQ88_05265 IPR018303 P-type ATPase, phosphorylation site KHQ88_05265 IPR023298 P-type ATPase, transmembrane domain superfamily KHQ88_05265 IPR008250 P-type ATPase, A domain superfamily KHQ88_05265 IPR036412 HAD-like superfamily KHQ88_05265 IPR023214 HAD superfamily KHQ88_05265 IPR017969 Heavy-metal-associated, conserved site KHQ88_05265 IPR006121 Heavy metal-associated domain, HMA KHQ88_05265 IPR036163 Heavy metal-associated domain superfamily KHQ88_05265 IPR001757 P-type ATPase KHQ88_05265 IPR027256 P-type ATPase, subfamily IB KHQ88_05270 IPR011006 CheY-like superfamily KHQ88_05270 IPR001867 OmpR/PhoB-type DNA-binding domain KHQ88_05270 IPR016032 Signal transduction response regulator, C-terminal effector KHQ88_05270 IPR001789 Signal transduction response regulator, receiver domain KHQ88_05270 IPR039420 Transcriptional regulatory protein WalR-like KHQ88_05270 IPR036388 Winged helix-like DNA-binding domain superfamily KHQ88_05295 IPR000037 SsrA-binding protein KHQ88_05295 IPR023620 Small protein B KHQ88_05295 IPR020081 SsrA-binding protein, conserved site KHQ88_05300 IPR040476 RNase II/RNase R, cold shock domain KHQ88_05300 IPR012340 Nucleic acid-binding, OB-fold KHQ88_05300 IPR013223 Ribonuclease B, N-terminal OB domain KHQ88_05300 IPR001900 Ribonuclease II/R KHQ88_05300 IPR022966 Ribonuclease II/R, conserved site KHQ88_05300 IPR004476 Ribonuclease II/ribonuclease R KHQ88_05300 IPR011805 Ribonuclease R KHQ88_05300 IPR022967 RNA-binding domain, S1 KHQ88_05300 IPR003029 S1 domain KHQ88_05300 IPR011129 Cold shock domain KHQ88_05310 IPR020811 Enolase, N-terminal KHQ88_05310 IPR029017 Enolase-like, N-terminal KHQ88_05310 IPR020810 Enolase, C-terminal TIM barrel domain KHQ88_05310 IPR020809 Enolase, conserved site KHQ88_05310 IPR000941 Enolase KHQ88_05310 IPR036849 Enolase-like, C-terminal domain superfamily KHQ88_05320 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily KHQ88_05320 IPR006124 Metalloenzyme KHQ88_05320 IPR011258 BPG-independent PGAM, N-terminal KHQ88_05320 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent KHQ88_05320 IPR017850 Alkaline-phosphatase-like, core domain superfamily KHQ88_05335 IPR002043 Uracil-DNA glycosylase family 1 KHQ88_05335 IPR018085 Uracil-DNA glycosylase, active site KHQ88_05335 IPR005122 Uracil-DNA glycosylase-like KHQ88_05335 IPR036895 Uracil-DNA glycosylase-like domain superfamily KHQ88_05345 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily KHQ88_05345 IPR005843 Alpha-D-phosphohexomutase, C-terminal KHQ88_05345 IPR005841 Alpha-D-phosphohexomutase superfamily KHQ88_05345 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II KHQ88_05345 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III KHQ88_05345 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I KHQ88_05345 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III KHQ88_05345 IPR016066 Alpha-D-phosphohexomutase, conserved site KHQ88_05350 IPR029479 Nitroreductase KHQ88_05350 IPR000415 Nitroreductase-like KHQ88_05365 IPR024529 ECF transporter, substrate-specific component KHQ88_05365 IPR025720 ECF transporter, Riboflavin transporter RibU KHQ88_05370 IPR007325 Kynurenine formamidase/cyclase-like KHQ88_05370 IPR037175 Kynurenine formamidase superfamily KHQ88_05370 IPR017484 Kynurenine formamidase, bacteria KHQ88_05375 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KHQ88_05375 IPR011833 Glycogen/starch/alpha-glucan phosphorylase KHQ88_05375 IPR000811 Glycosyl transferase, family 35 KHQ88_05380 IPR001296 Glycosyl transferase, family 1 KHQ88_05380 IPR013534 Starch synthase, catalytic domain KHQ88_05380 IPR011835 Bacterial/plant glycogen synthase KHQ88_05385 IPR011831 Glucose-1-phosphate adenylyltransferase KHQ88_05385 IPR005836 ADP-glucose pyrophosphorylase, conserved site KHQ88_05385 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial KHQ88_05385 IPR005835 Nucleotidyl transferase domain KHQ88_05385 IPR029044 Nucleotide-diphospho-sugar transferases KHQ88_05385 IPR011004 Trimeric LpxA-like superfamily KHQ88_05390 IPR014756 Immunoglobulin E-set KHQ88_05390 IPR013783 Immunoglobulin-like fold KHQ88_05390 IPR017853 Glycoside hydrolase superfamily KHQ88_05390 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta KHQ88_05390 IPR004193 Glycoside hydrolase, family 13, N-terminal KHQ88_05390 IPR006047 Glycosyl hydrolase, family 13, catalytic domain KHQ88_05390 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB KHQ88_05390 IPR037439 1,4-alpha-glucan-branching enzyme KHQ88_05390 IPR013780 Glycosyl hydrolase, all-beta KHQ88_05395 IPR003783 Regulatory protein RecX KHQ88_05395 IPR036388 Winged helix-like DNA-binding domain superfamily KHQ88_05400 IPR000352 Peptide chain release factor class I KHQ88_05400 IPR004374 Peptide chain release factor 2 KHQ88_05400 IPR005139 Peptide chain release factor KHQ88_05405 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_05405 IPR000185 Protein translocase subunit SecA KHQ88_05405 IPR020937 SecA conserved site KHQ88_05405 IPR014018 SecA motor DEAD KHQ88_05405 IPR011130 SecA, preprotein cross-linking domain KHQ88_05405 IPR011116 SecA Wing/Scaffold KHQ88_05405 IPR036266 SecA, Wing/Scaffold superfamily KHQ88_05405 IPR036670 SecA, preprotein cross-linking domain superfamily KHQ88_05405 IPR004027 SEC-C motif KHQ88_05405 IPR011115 SecA DEAD-like, N-terminal KHQ88_05410 IPR036567 Ribosome hibernation promotion factor-like KHQ88_05410 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal KHQ88_05410 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily KHQ88_05410 IPR003489 Ribosome hibernation promoting factor/RaiA KHQ88_05410 IPR034694 Ribosome hibernation promoting factor, long/plastid KHQ88_05420 IPR006935 Helicase/UvrB, N-terminal KHQ88_05420 IPR014001 Helicase superfamily 1/2, ATP-binding domain KHQ88_05420 IPR001650 Helicase, C-terminal KHQ88_05420 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_05425 IPR002300 Aminoacyl-tRNA synthetase, class Ia KHQ88_05425 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site KHQ88_05425 IPR002302 Leucine-tRNA ligase KHQ88_05425 IPR025709 Leucyl-tRNA synthetase, editing domain KHQ88_05425 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding KHQ88_05425 IPR015413 Methionyl/Leucyl tRNA synthetase KHQ88_05425 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold KHQ88_05425 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding KHQ88_05425 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain KHQ88_05435 IPR032432 Radical SAM, C-terminal extension KHQ88_05435 IPR023404 Radical SAM, alpha/beta horseshoe KHQ88_05435 IPR005911 Protein YhcC-like KHQ88_05435 IPR007197 Radical SAM KHQ88_05435 IPR006638 Elp3/MiaB/NifB KHQ88_05435 IPR039661 ELP3/YhcC KHQ88_05440 IPR000620 EamA domain KHQ88_05445 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase KHQ88_05445 IPR010719 Putative rRNA methylase KHQ88_05455 IPR022636 S-adenosylmethionine synthetase superfamily KHQ88_05455 IPR002133 S-adenosylmethionine synthetase KHQ88_05455 IPR022628 S-adenosylmethionine synthetase, N-terminal KHQ88_05455 IPR022629 S-adenosylmethionine synthetase, central domain KHQ88_05455 IPR022630 S-adenosylmethionine synthetase, C-terminal KHQ88_05455 IPR022631 S-adenosylmethionine synthetase, conserved site KHQ88_05465 IPR026038 Putative phosphatidylglycerophosphatase KHQ88_05465 IPR036681 PgpA-like superfamily KHQ88_05465 IPR007686 YutG/PgpA domain KHQ88_05470 IPR011034 Formyl transferase-like, C-terminal domain superfamily KHQ88_05470 IPR036477 Formyl transferase, N-terminal domain superfamily KHQ88_05470 IPR002376 Formyl transferase, N-terminal KHQ88_05470 IPR037022 Formyl transferase, C-terminal domain superfamily KHQ88_05470 IPR005793 Formyl transferase, C-terminal KHQ88_05470 IPR005794 Methionyl-tRNA formyltransferase KHQ88_05470 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain KHQ88_05475 IPR041222 Primosomal protein N', 3' DNA-binding domain KHQ88_05475 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily KHQ88_05475 IPR041236 Primosomal protein N, C-terminal domain KHQ88_05475 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain KHQ88_05475 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_05475 IPR006935 Helicase/UvrB, N-terminal KHQ88_05475 IPR001650 Helicase, C-terminal KHQ88_05475 IPR014001 Helicase superfamily 1/2, ATP-binding domain KHQ88_05475 IPR005259 Primosomal protein N' KHQ88_05480 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain KHQ88_05480 IPR001587 Ribonuclease J, conserved site KHQ88_05480 IPR041636 Ribonuclease J, C-terminal KHQ88_05480 IPR030854 Ribonuclease J, bacteria KHQ88_05480 IPR042173 Ribonuclease J, domain 2 KHQ88_05480 IPR004613 Ribonuclease J KHQ88_05480 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like KHQ88_05480 IPR001279 Metallo-beta-lactamase KHQ88_05490 IPR010994 RuvA domain 2-like KHQ88_05490 IPR001943 UVR domain KHQ88_05490 IPR038476 UvrC homology region 2 superfamily KHQ88_05490 IPR001162 UvrC family homology region KHQ88_05490 IPR035901 GIY-YIG endonuclease superfamily KHQ88_05490 IPR000305 GIY-YIG endonuclease KHQ88_05490 IPR004791 UvrABC system, subunit C KHQ88_05490 IPR036876 UVR domain superfamily KHQ88_05495 IPR015946 K homology domain-like, alpha/beta KHQ88_05495 IPR023799 Ribosome-binding factor A domain superfamily KHQ88_05495 IPR000238 Ribosome-binding factor A KHQ88_05495 IPR020053 Ribosome-binding factor A, conserved site KHQ88_05500 IPR006847 Translation initiation factor IF-2, N-terminal KHQ88_05500 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_05500 IPR005225 Small GTP-binding protein domain KHQ88_05500 IPR000795 Transcription factor, GTP-binding domain KHQ88_05500 IPR000178 Translation initiation factor aIF-2, bacterial-like KHQ88_05500 IPR015760 Translation initiation factor IF- 2 KHQ88_05500 IPR023115 Translation initiation factor IF- 2, domain 3 KHQ88_05500 IPR036925 Translation initiation factor IF-2, domain 3 superfamily KHQ88_05500 IPR009000 Translation protein, beta-barrel domain superfamily KHQ88_05510 IPR035931 YlxR-like superfamily KHQ88_05510 IPR007393 Domain of unknown function DUF448 KHQ88_05510 IPR037465 Uncharacterized protein YlxR KHQ88_05515 IPR015946 K homology domain-like, alpha/beta KHQ88_05515 IPR025249 KH domain, NusA-like KHQ88_05515 IPR009019 K homology domain superfamily, prokaryotic type KHQ88_05515 IPR012340 Nucleic acid-binding, OB-fold KHQ88_05515 IPR030842 Transcription termination/antitermination protein NusA, bacterial KHQ88_05515 IPR036555 NusA, N-terminal domain superfamily KHQ88_05515 IPR022967 RNA-binding domain, S1 KHQ88_05515 IPR003029 S1 domain KHQ88_05515 IPR013735 Transcription factor NusA, N-terminal KHQ88_05515 IPR010213 Transcription termination factor NusA KHQ88_05515 IPR004087 K Homology domain KHQ88_05520 IPR028998 Ribosome maturation factor RimP, C-terminal KHQ88_05520 IPR028989 Ribosome maturation factor RimP, N-terminal KHQ88_05520 IPR035956 RimP, N-terminal domain superfamily KHQ88_05520 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily KHQ88_05520 IPR003728 Ribosome maturation factor RimP KHQ88_05530 IPR029064 50S ribosomal protein L30e-like KHQ88_05530 IPR013123 RNA 2-O ribose methyltransferase, substrate binding KHQ88_05530 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal KHQ88_05530 IPR029028 Alpha/beta knot methyltransferases KHQ88_05530 IPR001537 tRNA/rRNA methyltransferase, SpoU type KHQ88_05540 IPR016181 Acyl-CoA N-acyltransferase KHQ88_05540 IPR000182 GNAT domain KHQ88_05545 IPR003720 tRNA sulfurtransferase ThiI KHQ88_05545 IPR004114 THUMP domain KHQ88_05545 IPR020536 Thil, AANH domain KHQ88_05545 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold KHQ88_05550 IPR003018 GAF domain KHQ88_05550 IPR029016 GAF-like domain superfamily KHQ88_05550 IPR000614 Free Met sulfoxide reductase conserved site KHQ88_05555 IPR022801 Ribosomal protein S4/S9 KHQ88_05555 IPR001912 Ribosomal protein S4/S9, N-terminal KHQ88_05555 IPR005709 Ribosomal protein S4, bacterial-type KHQ88_05555 IPR018079 Ribosomal protein S4, conserved site KHQ88_05555 IPR002942 RNA-binding S4 domain KHQ88_05555 IPR036986 RNA-binding S4 domain superfamily KHQ88_05560 IPR023536 Coenzyme A disulphide reductase, staphyolococci KHQ88_05560 IPR017758 Coenzyme A disulphide reductase KHQ88_05560 IPR036188 FAD/NAD(P)-binding domain superfamily KHQ88_05560 IPR023753 FAD/NAD(P)-binding domain KHQ88_05560 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily KHQ88_05560 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KHQ88_05565 IPR035990 Triosephosphate isomerase superfamily KHQ88_05565 IPR020861 Triosephosphate isomerase, active site KHQ88_05565 IPR000652 Triosephosphate isomerase KHQ88_05565 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic KHQ88_05565 IPR013785 Aldolase-type TIM barrel KHQ88_05570 IPR015824 Phosphoglycerate kinase, N-terminal KHQ88_05570 IPR001576 Phosphoglycerate kinase KHQ88_05570 IPR036043 Phosphoglycerate kinase superfamily KHQ88_05570 IPR015911 Phosphoglycerate kinase, conserved site KHQ88_05580 IPR010375 Cyclic-di-AMP receptor KHQ88_05580 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal KHQ88_05580 IPR011322 Nitrogen regulatory PII-like, alpha/beta KHQ88_05595 IPR000825 SUF system FeS cluster assembly, SufBD KHQ88_05595 IPR037284 SUF system FeS cluster assembly, SufBD superfamily KHQ88_05595 IPR010231 SUF system FeS cluster assembly, SufB KHQ88_05600 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal KHQ88_05605 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 KHQ88_05605 IPR015421 Pyridoxal phosphate-dependent transferase, major domain KHQ88_05605 IPR015424 Pyridoxal phosphate-dependent transferase KHQ88_05605 IPR000192 Aminotransferase class V domain KHQ88_05605 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site KHQ88_05605 IPR016454 Cysteine desulfurase KHQ88_05605 IPR010970 Cysteine desulfurase, SufS KHQ88_05610 IPR000825 SUF system FeS cluster assembly, SufBD KHQ88_05610 IPR037284 SUF system FeS cluster assembly, SufBD superfamily KHQ88_05610 IPR011542 SUF system FeS cluster assembly, SufD KHQ88_05615 IPR017871 ABC transporter, conserved site KHQ88_05615 IPR010230 FeS cluster assembly SUF system, ATPase SufC KHQ88_05615 IPR003439 ABC transporter-like KHQ88_05615 IPR003593 AAA+ ATPase domain KHQ88_05615 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_05620 IPR003416 MgtC/SapB/SrpB/YhiD family KHQ88_05625 IPR027469 Cation efflux transmembrane domain superfamily KHQ88_05625 IPR036837 Cation efflux protein, cytoplasmic domain superfamily KHQ88_05625 IPR027470 Cation efflux protein, cytoplasmic domain KHQ88_05625 IPR002524 Cation efflux protein KHQ88_05635 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding KHQ88_05635 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II KHQ88_05635 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain KHQ88_05635 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain KHQ88_05635 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal KHQ88_05635 IPR011895 Pyruvate-flavodoxin oxidoreductase KHQ88_05635 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain KHQ88_05635 IPR029061 Thiamin diphosphate-binding fold KHQ88_05635 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site KHQ88_05635 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain KHQ88_05635 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II KHQ88_05640 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like KHQ88_05640 IPR001279 Metallo-beta-lactamase KHQ88_05685 IPR000073 Alpha/beta hydrolase fold-1 KHQ88_05685 IPR000639 Epoxide hydrolase-like KHQ88_05685 IPR023791 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase KHQ88_05685 IPR029058 Alpha/Beta hydrolase fold KHQ88_05690 IPR029058 Alpha/Beta hydrolase fold KHQ88_05690 IPR000073 Alpha/beta hydrolase fold-1 KHQ88_05690 IPR026968 3-oxoadipate enol-lactonase 1/2 KHQ88_05695 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain KHQ88_05695 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily KHQ88_05695 IPR003702 Acetyl-CoA hydrolase/transferase KHQ88_05695 IPR037171 NagB/RpiA transferase-like KHQ88_05705 IPR017871 ABC transporter, conserved site KHQ88_05705 IPR003593 AAA+ ATPase domain KHQ88_05705 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein KHQ88_05705 IPR003439 ABC transporter-like KHQ88_05705 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_05710 IPR003439 ABC transporter-like KHQ88_05710 IPR017871 ABC transporter, conserved site KHQ88_05710 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal KHQ88_05710 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_05710 IPR003593 AAA+ ATPase domain KHQ88_05720 IPR001851 ABC transporter, permease KHQ88_05725 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 KHQ88_05725 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KHQ88_05725 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KHQ88_05725 IPR016039 Thiolase-like KHQ88_05730 IPR036291 NAD(P)-binding domain superfamily KHQ88_05730 IPR020904 Short-chain dehydrogenase/reductase, conserved site KHQ88_05730 IPR002347 Short-chain dehydrogenase/reductase SDR KHQ88_05730 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase KHQ88_05735 IPR016039 Thiolase-like KHQ88_05735 IPR020615 Thiolase, acyl-enzyme intermediate active site KHQ88_05735 IPR020610 Thiolase, active site KHQ88_05735 IPR002155 Thiolase KHQ88_05735 IPR020613 Thiolase, conserved site KHQ88_05735 IPR020616 Thiolase, N-terminal KHQ88_05735 IPR020617 Thiolase, C-terminal KHQ88_05740 IPR009057 Homeobox-like domain superfamily KHQ88_05740 IPR001647 DNA-binding HTH domain, TetR-type KHQ88_05740 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily KHQ88_05745 IPR013515 Phytochrome, central region KHQ88_05745 IPR001294 Phytochrome KHQ88_05745 IPR016132 Phytochrome chromophore attachment domain KHQ88_05745 IPR000160 GGDEF domain KHQ88_05745 IPR029016 GAF-like domain superfamily KHQ88_05745 IPR003018 GAF domain KHQ88_05745 IPR035919 EAL domain superfamily KHQ88_05745 IPR029787 Nucleotide cyclase KHQ88_05745 IPR001633 EAL domain KHQ88_05750 IPR008984 SMAD/FHA domain superfamily KHQ88_05750 IPR029787 Nucleotide cyclase KHQ88_05750 IPR000160 GGDEF domain KHQ88_05750 IPR000253 Forkhead-associated (FHA) domain KHQ88_05750 IPR035919 EAL domain superfamily KHQ88_05750 IPR001633 EAL domain KHQ88_05770 IPR006674 HD domain KHQ88_05770 IPR020873 3'-5' exoribonuclease YhaM KHQ88_05770 IPR003607 HD/PDEase domain KHQ88_05770 IPR012340 Nucleic acid-binding, OB-fold KHQ88_05775 IPR006047 Glycosyl hydrolase, family 13, catalytic domain KHQ88_05775 IPR013780 Glycosyl hydrolase, all-beta KHQ88_05775 IPR017853 Glycoside hydrolase superfamily KHQ88_05775 IPR013783 Immunoglobulin-like fold KHQ88_05775 IPR014756 Immunoglobulin E-set KHQ88_05775 IPR040697 Pullulanase, N1 domain KHQ88_05775 IPR011840 Pullulanase, type I KHQ88_05775 IPR004193 Glycoside hydrolase, family 13, N-terminal KHQ88_05780 IPR032810 CCA-adding enzyme, C-terminal KHQ88_05780 IPR002646 Poly A polymerase, head domain KHQ88_05780 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain KHQ88_05780 IPR023068 CCA-adding enzyme, firmicutes KHQ88_05785 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site KHQ88_05785 IPR015796 Impact family, bacterial/archaeal KHQ88_05785 IPR001498 Impact, N-terminal KHQ88_05785 IPR036956 Impact, N-terminal domain superfamily KHQ88_05785 IPR020568 Ribosomal protein S5 domain 2-type fold KHQ88_05785 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal KHQ88_05785 IPR023582 Impact family KHQ88_05785 IPR035647 EF-G domain III/V-like KHQ88_05820 IPR036390 Winged helix DNA-binding domain superfamily KHQ88_05820 IPR036388 Winged helix-like DNA-binding domain superfamily KHQ88_05820 IPR005149 Transcription regulator PadR, N-terminal KHQ88_05825 IPR003797 DegV KHQ88_05830 IPR033420 Gammaproteobacterial periplasmic sensor domain GAPES1 KHQ88_05830 IPR029787 Nucleotide cyclase KHQ88_05830 IPR000160 GGDEF domain KHQ88_05845 IPR015946 K homology domain-like, alpha/beta KHQ88_05845 IPR009019 K homology domain superfamily, prokaryotic type KHQ88_05845 IPR020627 Uncharacterised protein family UPF0109 KHQ88_05850 IPR000307 Ribosomal protein S16 KHQ88_05850 IPR020592 Ribosomal protein S16, conserved site KHQ88_05850 IPR023803 Ribosomal protein S16 domain superfamily KHQ88_05860 IPR036821 Peptide deformylase superfamily KHQ88_05860 IPR023635 Peptide deformylase KHQ88_05865 IPR003797 DegV KHQ88_05870 IPR038765 Papain-like cysteine peptidase superfamily KHQ88_05870 IPR025660 Cysteine peptidase, histidine active site KHQ88_05870 IPR004134 Peptidase C1B, bleomycin hydrolase KHQ88_05870 IPR000169 Cysteine peptidase, cysteine active site KHQ88_05875 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit KHQ88_05875 IPR017927 FAD-binding domain, ferredoxin reductase-type KHQ88_05875 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain KHQ88_05875 IPR017938 Riboflavin synthase-like beta-barrel KHQ88_05875 IPR001433 Oxidoreductase FAD/NAD(P)-binding KHQ88_05875 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain KHQ88_05880 IPR028261 Dihydroprymidine dehydrogenase domain II KHQ88_05880 IPR036188 FAD/NAD(P)-binding domain superfamily KHQ88_05880 IPR023753 FAD/NAD(P)-binding domain KHQ88_05880 IPR009051 Alpha-helical ferredoxin KHQ88_05890 IPR003439 ABC transporter-like KHQ88_05890 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_05890 IPR003593 AAA+ ATPase domain KHQ88_05890 IPR017871 ABC transporter, conserved site KHQ88_05910 IPR015424 Pyridoxal phosphate-dependent transferase KHQ88_05910 IPR027619 Putative C-S lyase KHQ88_05910 IPR004839 Aminotransferase, class I/classII KHQ88_05910 IPR015421 Pyridoxal phosphate-dependent transferase, major domain KHQ88_05910 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 KHQ88_05915 IPR000160 GGDEF domain KHQ88_05915 IPR000014 PAS domain KHQ88_05915 IPR000700 PAS-associated, C-terminal KHQ88_05915 IPR035965 PAS domain superfamily KHQ88_05915 IPR013656 PAS fold-4 KHQ88_05915 IPR029787 Nucleotide cyclase KHQ88_05925 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding KHQ88_05925 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain KHQ88_05925 IPR036388 Winged helix-like DNA-binding domain superfamily KHQ88_05930 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily KHQ88_05930 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase KHQ88_05935 IPR026033 Azaguanine-like transporters KHQ88_05935 IPR006043 Xanthine/uracil/vitamin C permease KHQ88_05940 IPR006043 Xanthine/uracil/vitamin C permease KHQ88_05940 IPR006042 Xanthine/uracil permease KHQ88_05940 IPR029935 Uracil permease KHQ88_05945 IPR004837 Sodium/calcium exchanger membrane region KHQ88_05945 IPR004481 Sodium/potassium/calcium exchanger KHQ88_05980 IPR003439 ABC transporter-like KHQ88_05980 IPR011527 ABC transporter type 1, transmembrane domain KHQ88_05980 IPR017871 ABC transporter, conserved site KHQ88_05980 IPR036640 ABC transporter type 1, transmembrane domain superfamily KHQ88_05980 IPR005896 Glucan exporter ATP-binding protein, NdvA KHQ88_05980 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_05980 IPR039421 Type I protein exporter KHQ88_05980 IPR003593 AAA+ ATPase domain KHQ88_05980 IPR017902 ABC transporter, beta-glucan-transporting ATPase KHQ88_06005 IPR003593 AAA+ ATPase domain KHQ88_06005 IPR011527 ABC transporter type 1, transmembrane domain KHQ88_06005 IPR036640 ABC transporter type 1, transmembrane domain superfamily KHQ88_06005 IPR003439 ABC transporter-like KHQ88_06005 IPR017871 ABC transporter, conserved site KHQ88_06005 IPR005897 Peptidase C39, ABC-type bacteriocin transporter KHQ88_06005 IPR005074 Peptidase C39, bacteriocin processing KHQ88_06005 IPR039421 Type I protein exporter KHQ88_06005 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_06045 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase KHQ88_06045 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain KHQ88_06045 IPR037523 Vicinal oxygen chelate (VOC) domain KHQ88_06045 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II KHQ88_06055 IPR013678 Ribonucleotide reductase class II vitamin B12-dependent, N-terminal domain KHQ88_06055 IPR000788 Ribonucleotide reductase large subunit, C-terminal KHQ88_06055 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent KHQ88_06060 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding KHQ88_06060 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KHQ88_06060 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold KHQ88_06060 IPR000924 Glutamyl/glutaminyl-tRNA synthetase KHQ88_06060 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site KHQ88_06060 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain KHQ88_06060 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial KHQ88_06065 IPR005130 Serine dehydratase-like, alpha subunit KHQ88_06065 IPR021144 Uncharacterised protein family UPF0597 KHQ88_06070 IPR027057 CAAX prenyl protease 1 KHQ88_06070 IPR001915 Peptidase M48 KHQ88_06070 IPR032456 CAAX prenyl protease 1, N-terminal KHQ88_06080 IPR001017 Dehydrogenase, E1 component KHQ88_06080 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KHQ88_06080 IPR029061 Thiamin diphosphate-binding fold KHQ88_06085 IPR029061 Thiamin diphosphate-binding fold KHQ88_06085 IPR005475 Transketolase-like, pyrimidine-binding domain KHQ88_06085 IPR033248 Transketolase, C-terminal domain KHQ88_06085 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II KHQ88_06090 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site KHQ88_06090 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain KHQ88_06090 IPR000089 Biotin/lipoyl attachment KHQ88_06090 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily KHQ88_06090 IPR036625 E3-binding domain superfamily KHQ88_06090 IPR004167 Peripheral subunit-binding domain KHQ88_06090 IPR011053 Single hybrid motif KHQ88_06095 IPR036188 FAD/NAD(P)-binding domain superfamily KHQ88_06095 IPR023753 FAD/NAD(P)-binding domain KHQ88_06095 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site KHQ88_06100 IPR019491 Lipoate protein ligase, C-terminal KHQ88_06100 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain KHQ88_06100 IPR004562 Lipoyltransferase/lipoate-protein ligase KHQ88_06110 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit KHQ88_06110 IPR003918 NADH:ubiquinone oxidoreductase KHQ88_06115 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit KHQ88_06115 IPR003918 NADH:ubiquinone oxidoreductase KHQ88_06120 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit KHQ88_06120 IPR003918 NADH:ubiquinone oxidoreductase KHQ88_06120 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 KHQ88_06130 IPR007182 Na+/H+ antiporter MnhB subunit-related protein KHQ88_06130 IPR005281 Monovalent cation:proton antiporter, subunit B KHQ88_06145 IPR005133 Na+/H+ antiporter subunit G KHQ88_06150 IPR007208 Na(+)/H(+) antiporter subunit F-like KHQ88_06160 IPR039697 Iron-type alcohol dehydrogenase-like KHQ88_06160 IPR018211 Alcohol dehydrogenase, iron-type, conserved site KHQ88_06160 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA KHQ88_06185 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_06185 IPR013374 ATPase, type IV, pilus assembly, PilB KHQ88_06185 IPR037257 General secretory system II, protein E, N-terminal superfamily KHQ88_06185 IPR007831 General secretory system II, protein E, N-terminal KHQ88_06185 IPR042181 Type II secretion system, protein E, N-terminal KHQ88_06185 IPR001482 Type II/IV secretion system protein KHQ88_06185 IPR003593 AAA+ ATPase domain KHQ88_06190 IPR042094 Type II secretion system F domain superfamily KHQ88_06190 IPR018076 Type II secretion system F domain KHQ88_06190 IPR001992 Type II secretion system conserved site KHQ88_06190 IPR003004 GspF/PilC family KHQ88_06195 IPR010054 General secretion pathway protein G KHQ88_06195 IPR012902 Prokaryotic N-terminal methylation site KHQ88_06195 IPR000983 Bacterial general secretion pathway protein G-type pilin KHQ88_06195 IPR013545 Type II secretion system protein G KHQ88_06200 IPR000983 Bacterial general secretion pathway protein G-type pilin KHQ88_06200 IPR012902 Prokaryotic N-terminal methylation site KHQ88_06200 IPR001082 Fimbrial protein pilin KHQ88_06210 IPR010627 Peptidase A24A, N-terminal KHQ88_06210 IPR000045 Prepilin type IV endopeptidase, peptidase domain KHQ88_06225 IPR010582 Catalase immune-responsive domain KHQ88_06225 IPR020835 Catalase superfamily KHQ88_06225 IPR037060 Catalase core domain superfamily KHQ88_06225 IPR011614 Catalase core domain KHQ88_06225 IPR018028 Catalase, mono-functional, haem-containing KHQ88_06225 IPR040333 Catalase, clade 3 KHQ88_06225 IPR002226 Catalase haem-binding site KHQ88_06225 IPR024708 Catalase active site KHQ88_06225 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 KHQ88_06230 IPR007401 Protein of unknown function DUF454 KHQ88_06250 IPR005583 Peroxide stress protein YaaA KHQ88_06255 IPR000917 Sulfatase, N-terminal KHQ88_06255 IPR012160 Lipoteichoic acid synthase-like KHQ88_06255 IPR017850 Alkaline-phosphatase-like, core domain superfamily KHQ88_06260 IPR041682 AAA domain, group 14 KHQ88_06260 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_06260 IPR025420 Domain of unknown function DUF4143 KHQ88_06310 IPR013785 Aldolase-type TIM barrel KHQ88_06310 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme KHQ88_06310 IPR007197 Radical SAM KHQ88_06310 IPR023885 4Fe4S-binding SPASM domain KHQ88_06355 IPR001478 PDZ domain KHQ88_06355 IPR036034 PDZ superfamily KHQ88_06355 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase KHQ88_06355 IPR008915 Peptidase M50 KHQ88_06360 IPR036291 NAD(P)-binding domain superfamily KHQ88_06360 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KHQ88_06360 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal KHQ88_06360 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal KHQ88_06360 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase KHQ88_06360 IPR026877 DXP reductoisomerase C-terminal domain KHQ88_06365 IPR000374 Phosphatidate cytidylyltransferase KHQ88_06370 IPR001441 Decaprenyl diphosphate synthase-like KHQ88_06370 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site KHQ88_06370 IPR036424 Decaprenyl diphosphate synthase-like superfamily KHQ88_06375 IPR002661 Ribosome recycling factor KHQ88_06375 IPR023584 Ribosome recycling factor domain KHQ88_06375 IPR036191 RRF superfamily KHQ88_06380 IPR001048 Aspartate/glutamate/uridylate kinase KHQ88_06380 IPR011817 Uridylate kinase KHQ88_06380 IPR015963 Uridylate kinase, bacteria KHQ88_06380 IPR036393 Acetylglutamate kinase-like superfamily KHQ88_06385 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation KHQ88_06385 IPR036402 Elongation factor Ts, dimerisation domain superfamily KHQ88_06385 IPR018101 Translation elongation factor Ts, conserved site KHQ88_06385 IPR009060 UBA-like superfamily KHQ88_06385 IPR001816 Translation elongation factor EFTs/EF1B KHQ88_06390 IPR001865 Ribosomal protein S2 KHQ88_06390 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid KHQ88_06390 IPR018130 Ribosomal protein S2, conserved site KHQ88_06390 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily KHQ88_06395 IPR029054 dUTPase-like KHQ88_06395 IPR036157 dUTPase-like superfamily KHQ88_06395 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase KHQ88_06395 IPR033704 dUTPase, trimeric KHQ88_06400 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain KHQ88_06400 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal KHQ88_06400 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal KHQ88_06400 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit KHQ88_06400 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily KHQ88_06405 IPR003593 AAA+ ATPase domain KHQ88_06405 IPR005722 ATP synthase, F1 complex, beta subunit KHQ88_06405 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site KHQ88_06405 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain KHQ88_06405 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily KHQ88_06405 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain KHQ88_06405 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_06405 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KHQ88_06410 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily KHQ88_06410 IPR000131 ATP synthase, F1 complex, gamma subunit KHQ88_06415 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KHQ88_06415 IPR000793 ATP synthase, alpha subunit, C-terminal KHQ88_06415 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KHQ88_06415 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain KHQ88_06415 IPR005294 ATP synthase, F1 complex, alpha subunit KHQ88_06415 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site KHQ88_06415 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain KHQ88_06415 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain KHQ88_06415 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily KHQ88_06415 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_06420 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily KHQ88_06420 IPR000711 ATPase, OSCP/delta subunit KHQ88_06425 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily KHQ88_06425 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast KHQ88_06425 IPR005864 ATP synthase, F0 complex, subunit b, bacterial KHQ88_06435 IPR000568 ATP synthase, F0 complex, subunit A KHQ88_06435 IPR035908 ATP synthase, F0 complex, subunit A superfamily KHQ88_06450 IPR005765 Uracil phosphoribosyl transferase KHQ88_06450 IPR000836 Phosphoribosyltransferase domain KHQ88_06450 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KHQ88_06450 IPR029057 Phosphoribosyltransferase-like KHQ88_06455 IPR036412 HAD-like superfamily KHQ88_06455 IPR006439 HAD hydrolase, subfamily IA KHQ88_06455 IPR041492 Haloacid dehalogenase-like hydrolase KHQ88_06455 IPR023214 HAD superfamily KHQ88_06455 IPR023198 Phosphoglycolate phosphatase-like, domain 2 KHQ88_06455 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic KHQ88_06455 IPR037512 Phosphoglycolate phosphatase, prokaryotic KHQ88_06460 IPR001352 Ribonuclease HII/HIII KHQ88_06460 IPR036397 Ribonuclease H superfamily KHQ88_06460 IPR012337 Ribonuclease H-like superfamily KHQ88_06460 IPR024567 Ribonuclease HII/HIII domain KHQ88_06460 IPR022898 Ribonuclease HII KHQ88_06465 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_06465 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain KHQ88_06465 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily KHQ88_06465 IPR019991 GTP-binding protein, ribosome biogenesis KHQ88_06465 IPR006073 GTP binding domain KHQ88_06465 IPR016478 GTPase, MTG1 KHQ88_06470 IPR036286 LexA/Signal peptidase-like superfamily KHQ88_06470 IPR000223 Peptidase S26A, signal peptidase I KHQ88_06470 IPR019533 Peptidase S26 KHQ88_06470 IPR019757 Peptidase S26A, signal peptidase I, lysine active site KHQ88_06470 IPR019758 Peptidase S26A, signal peptidase I, conserved site KHQ88_06470 IPR019756 Peptidase S26A, signal peptidase I, serine active site KHQ88_06475 IPR003593 AAA+ ATPase domain KHQ88_06475 IPR041027 FtsK alpha domain KHQ88_06475 IPR002543 FtsK domain KHQ88_06475 IPR018541 FtsK gamma domain KHQ88_06475 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_06475 IPR036388 Winged helix-like DNA-binding domain superfamily KHQ88_06475 IPR036390 Winged helix DNA-binding domain superfamily KHQ88_06485 IPR000150 Cof family KHQ88_06485 IPR036412 HAD-like superfamily KHQ88_06485 IPR023214 HAD superfamily KHQ88_06485 IPR006379 HAD-superfamily hydrolase, subfamily IIB KHQ88_06490 IPR003593 AAA+ ATPase domain KHQ88_06490 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_06490 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily KHQ88_06490 IPR013822 Signal recognition particle SRP54, helical bundle KHQ88_06490 IPR004125 Signal recognition particle, SRP54 subunit, M-domain KHQ88_06490 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily KHQ88_06490 IPR004780 Signal recognition particle protein KHQ88_06490 IPR022941 Signal recognition particle, SRP54 subunit KHQ88_06490 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain KHQ88_06495 IPR013324 RNA polymerase sigma factor, region 3/4-like KHQ88_06495 IPR036388 Winged helix-like DNA-binding domain superfamily KHQ88_06495 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like KHQ88_06500 IPR003593 AAA+ ATPase domain KHQ88_06500 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_06500 IPR013822 Signal recognition particle SRP54, helical bundle KHQ88_06500 IPR004390 Signal-recognition particle receptor FtsY KHQ88_06500 IPR036225 SRP/SRP receptor, N-terminal KHQ88_06500 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain KHQ88_06500 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily KHQ88_06505 IPR034149 DNA topoisomerase 1, TOPRIM domain KHQ88_06505 IPR028612 DNA topoisomerase I, type IA KHQ88_06505 IPR005733 DNA topoisomerase I, bacterial-type KHQ88_06505 IPR013498 DNA topoisomerase, type IA, zn finger KHQ88_06505 IPR003602 DNA topoisomerase, type IA, DNA-binding domain KHQ88_06505 IPR013497 DNA topoisomerase, type IA, central KHQ88_06505 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 KHQ88_06505 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 KHQ88_06505 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 KHQ88_06505 IPR003601 DNA topoisomerase, type IA, domain 2 KHQ88_06505 IPR000380 DNA topoisomerase, type IA KHQ88_06505 IPR023405 DNA topoisomerase, type IA, core domain KHQ88_06505 IPR006171 TOPRIM domain KHQ88_06505 IPR023406 DNA topoisomerase, type IA, active site KHQ88_06510 IPR025714 Methyltransferase domain KHQ88_06510 IPR002052 DNA methylase, N-6 adenine-specific, conserved site KHQ88_06510 IPR040758 Release factor glutamine methyltransferase, N-terminal domain KHQ88_06510 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific KHQ88_06510 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase KHQ88_06510 IPR004556 Methyltransferase HemK-like KHQ88_06515 IPR005139 Peptide chain release factor KHQ88_06515 IPR000352 Peptide chain release factor class I KHQ88_06515 IPR004373 Peptide chain release factor 1 KHQ88_06520 IPR003593 AAA+ ATPase domain KHQ88_06520 IPR007692 DNA helicase, DnaB type KHQ88_06520 IPR007694 DNA helicase, DnaB-like, C-terminal KHQ88_06520 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily KHQ88_06520 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_06520 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal KHQ88_06520 IPR007693 DNA helicase, DnaB-like, N-terminal KHQ88_06525 IPR001667 DDH domain KHQ88_06525 IPR038763 DHH phosphoesterase superfamily KHQ88_06525 IPR003156 DHHA1 domain KHQ88_06525 IPR000160 GGDEF domain KHQ88_06525 IPR009027 Ribosomal protein L9/RNase H1, N-terminal KHQ88_06525 IPR020594 Ribosomal protein L9, bacteria/chloroplast KHQ88_06525 IPR036791 Ribosomal protein L9, C-terminal domain superfamily KHQ88_06525 IPR020070 Ribosomal protein L9, N-terminal KHQ88_06525 IPR036935 Ribosomal protein L9, N-terminal domain superfamily KHQ88_06525 IPR020069 Ribosomal protein L9, C-terminal KHQ88_06530 IPR018275 Ribosomal protein S18, conserved site KHQ88_06530 IPR001648 Ribosomal protein S18 KHQ88_06530 IPR036870 Ribosomal protein S18 superfamily KHQ88_06535 IPR012340 Nucleic acid-binding, OB-fold KHQ88_06535 IPR000424 Primosome PriB/single-strand DNA-binding KHQ88_06535 IPR011344 Single-stranded DNA-binding protein KHQ88_06540 IPR000529 Ribosomal protein S6 KHQ88_06540 IPR020815 Ribosomal protein S6, conserved site KHQ88_06540 IPR020814 Ribosomal protein S6, plastid/chloroplast KHQ88_06540 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 KHQ88_06540 IPR035980 Ribosomal protein S6 superfamily KHQ88_06555 IPR001453 MoaB/Mog domain KHQ88_06555 IPR036653 CinA-like, C-terminal KHQ88_06555 IPR008136 CinA, C-terminal KHQ88_06555 IPR041424 CinA, KH domain KHQ88_06555 IPR008135 Competence-induced protein CinA KHQ88_06555 IPR036425 MoaB/Mog-like domain superfamily KHQ88_06560 IPR006073 GTP binding domain KHQ88_06560 IPR031167 OBG-type guanine nucleotide-binding (G) domain KHQ88_06560 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 KHQ88_06560 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_06560 IPR004095 TGS KHQ88_06560 IPR012676 TGS-like KHQ88_06560 IPR023192 TGS-like domain superfamily KHQ88_06560 IPR013029 YchF, C-terminal domain KHQ88_06560 IPR041706 YchF, N-terminal KHQ88_06560 IPR012675 Beta-grasp domain superfamily KHQ88_06565 IPR032466 Metal-dependent hydrolase KHQ88_06565 IPR018228 Deoxyribonuclease, TatD-related, conserved site KHQ88_06565 IPR001130 TatD family KHQ88_06565 IPR015991 Uncharacterised hydrolase TatD-type KHQ88_06570 IPR005474 Transketolase, N-terminal KHQ88_06570 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II KHQ88_06570 IPR005475 Transketolase-like, pyrimidine-binding domain KHQ88_06570 IPR005478 Transketolase, bacterial-like KHQ88_06570 IPR020826 Transketolase binding site KHQ88_06570 IPR033248 Transketolase, C-terminal domain KHQ88_06570 IPR029061 Thiamin diphosphate-binding fold KHQ88_06570 IPR033247 Transketolase family KHQ88_06575 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain KHQ88_06575 IPR009000 Translation protein, beta-barrel domain superfamily KHQ88_06575 IPR031157 Tr-type G domain, conserved site KHQ88_06575 IPR004161 Translation elongation factor EFTu-like, domain 2 KHQ88_06575 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal KHQ88_06575 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle KHQ88_06575 IPR033720 Elongation factor Tu, domain 2 KHQ88_06575 IPR000795 Transcription factor, GTP-binding domain KHQ88_06575 IPR005225 Small GTP-binding protein domain KHQ88_06575 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_06575 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal KHQ88_06580 IPR005517 Translation elongation factor EFG/EF2, domain IV KHQ88_06580 IPR004540 Translation elongation factor EFG/EF2 KHQ88_06580 IPR009000 Translation protein, beta-barrel domain superfamily KHQ88_06580 IPR000795 Transcription factor, GTP-binding domain KHQ88_06580 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup KHQ88_06580 IPR020568 Ribosomal protein S5 domain 2-type fold KHQ88_06580 IPR031157 Tr-type G domain, conserved site KHQ88_06580 IPR004161 Translation elongation factor EFTu-like, domain 2 KHQ88_06580 IPR035649 EFG, domain V KHQ88_06580 IPR035647 EF-G domain III/V-like KHQ88_06580 IPR009022 Elongation factor G, domain III KHQ88_06580 IPR041095 Elongation Factor G, domain II KHQ88_06580 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_06580 IPR000640 Elongation factor EFG, domain V-like KHQ88_06580 IPR005225 Small GTP-binding protein domain KHQ88_06585 IPR036823 Ribosomal protein S7 domain superfamily KHQ88_06585 IPR023798 Ribosomal protein S7 domain KHQ88_06585 IPR020606 Ribosomal protein S7, conserved site KHQ88_06585 IPR005717 Ribosomal protein S7, bacterial/organellar-type KHQ88_06585 IPR000235 Ribosomal protein S5/S7 KHQ88_06590 IPR005679 Ribosomal protein S12, bacterial-type KHQ88_06590 IPR006032 Ribosomal protein S12/S23 KHQ88_06590 IPR012340 Nucleic acid-binding, OB-fold KHQ88_06600 IPR000086 NUDIX hydrolase domain KHQ88_06600 IPR020084 NUDIX hydrolase, conserved site KHQ88_06600 IPR015797 NUDIX hydrolase-like domain superfamily KHQ88_06600 IPR020476 NUDIX hydrolase KHQ88_06600 IPR003561 Mutator MutT KHQ88_06605 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase KHQ88_06605 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase KHQ88_06610 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase KHQ88_06610 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase KHQ88_06645 IPR007080 RNA polymerase Rpb1, domain 1 KHQ88_06645 IPR007066 RNA polymerase Rpb1, domain 3 KHQ88_06645 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KHQ88_06645 IPR007081 RNA polymerase Rpb1, domain 5 KHQ88_06645 IPR006592 RNA polymerase, N-terminal KHQ88_06645 IPR012754 DNA-directed RNA polymerase, subunit beta-prime KHQ88_06645 IPR000722 RNA polymerase, alpha subunit KHQ88_06645 IPR042102 RNA polymerase Rpb1, domain 3 superfamily KHQ88_06645 IPR007083 RNA polymerase Rpb1, domain 4 KHQ88_06650 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain KHQ88_06650 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain KHQ88_06650 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type KHQ88_06650 IPR007121 RNA polymerase, beta subunit, conserved site KHQ88_06650 IPR007644 RNA polymerase, beta subunit, protrusion KHQ88_06650 IPR007642 RNA polymerase Rpb2, domain 2 KHQ88_06650 IPR037034 RNA polymerase Rpb2, domain 2 superfamily KHQ88_06650 IPR007645 RNA polymerase Rpb2, domain 3 KHQ88_06650 IPR007641 RNA polymerase Rpb2, domain 7 KHQ88_06650 IPR014724 RNA polymerase Rpb2, OB-fold KHQ88_06650 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily KHQ88_06650 IPR015712 DNA-directed RNA polymerase, subunit 2 KHQ88_06655 IPR007848 Methyltransferase small domain KHQ88_06655 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase KHQ88_06660 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily KHQ88_06660 IPR008932 Ribosomal protein L7/L12, oligomerisation KHQ88_06660 IPR013823 Ribosomal protein L7/L12, C-terminal KHQ88_06660 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like KHQ88_06660 IPR000206 Ribosomal protein L7/L12 KHQ88_06665 IPR001790 Ribosomal protein L10P KHQ88_06665 IPR002363 Ribosomal protein L10, eubacterial, conserved site KHQ88_06665 IPR022973 Ribosomal protein L10 KHQ88_06670 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich KHQ88_06670 IPR023674 Ribosomal protein L1-like KHQ88_06670 IPR002143 Ribosomal protein L1 KHQ88_06670 IPR005878 Ribosomal protein L1, bacterial-type KHQ88_06670 IPR023673 Ribosomal protein L1, conserved site KHQ88_06670 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein KHQ88_06675 IPR000911 Ribosomal protein L11/L12 KHQ88_06675 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily KHQ88_06675 IPR006519 Ribosomal protein L11, bacterial-type KHQ88_06675 IPR020783 Ribosomal protein L11, C-terminal KHQ88_06675 IPR036769 Ribosomal protein L11, C-terminal domain superfamily KHQ88_06675 IPR020785 Ribosomal protein L11, conserved site KHQ88_06675 IPR020784 Ribosomal protein L11, N-terminal KHQ88_06680 IPR017871 ABC transporter, conserved site KHQ88_06680 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_06680 IPR015854 ABC transporter, lipoprotein release, LolD KHQ88_06680 IPR003593 AAA+ ATPase domain KHQ88_06680 IPR003439 ABC transporter-like KHQ88_06685 IPR017911 ABC transporter, macrolide export, ATP-binding domain KHQ88_06685 IPR003593 AAA+ ATPase domain KHQ88_06685 IPR003838 ABC transporter permease protein domain KHQ88_06685 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_06685 IPR003439 ABC transporter-like KHQ88_06685 IPR017871 ABC transporter, conserved site KHQ88_06685 IPR025857 MacB-like periplasmic core domain KHQ88_06690 IPR006645 NusG, N-terminal KHQ88_06690 IPR005824 KOW KHQ88_06690 IPR008991 Translation protein SH3-like domain superfamily KHQ88_06690 IPR014722 Ribosomal protein L2, domain 2 KHQ88_06690 IPR036735 NusG, N-terminal domain superfamily KHQ88_06690 IPR001062 Transcription antitermination protein, NusG KHQ88_06690 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site KHQ88_06700 IPR038584 Ribosomal protein L33 superfamily KHQ88_06700 IPR001705 Ribosomal protein L33 KHQ88_06700 IPR018264 Ribosomal protein L33, conserved site KHQ88_06700 IPR011332 Zinc-binding ribosomal protein KHQ88_06710 IPR029028 Alpha/beta knot methyltransferases KHQ88_06710 IPR029064 50S ribosomal protein L30e-like KHQ88_06710 IPR004441 RNA methyltransferase TrmH family KHQ88_06710 IPR001537 tRNA/rRNA methyltransferase, SpoU type KHQ88_06710 IPR013123 RNA 2-O ribose methyltransferase, substrate binding KHQ88_06710 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal KHQ88_06715 IPR008226 Mini-ribonuclease 3 family KHQ88_06715 IPR000999 Ribonuclease III domain KHQ88_06715 IPR036389 Ribonuclease III, endonuclease domain superfamily KHQ88_06720 IPR015803 Cysteine-tRNA ligase KHQ88_06720 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR KHQ88_06720 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KHQ88_06720 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold KHQ88_06720 IPR032678 tRNA synthetases class I, catalytic domain KHQ88_06720 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding KHQ88_06725 IPR002059 Cold-shock protein, DNA-binding KHQ88_06725 IPR019844 Cold-shock (CSD) domain KHQ88_06725 IPR011129 Cold shock domain KHQ88_06725 IPR012156 Cold shock, CspA KHQ88_06725 IPR012340 Nucleic acid-binding, OB-fold KHQ88_06730 IPR003798 DNA recombination RmuC KHQ88_06735 IPR000515 ABC transporter type 1, transmembrane domain MetI-like KHQ88_06735 IPR025202 Phospholipase D-like domain KHQ88_06735 IPR022924 Cardiolipin synthase KHQ88_06735 IPR030874 Cardiolipin synthase, Firmicutes-type KHQ88_06735 IPR001736 Phospholipase D/Transphosphatidylase KHQ88_06735 IPR027379 Cardiolipin synthase N-terminal KHQ88_06745 IPR020568 Ribosomal protein S5 domain 2-type fold KHQ88_06745 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup KHQ88_06745 IPR000754 Ribosomal protein S9 KHQ88_06745 IPR020574 Ribosomal protein S9, conserved site KHQ88_06745 IPR023035 Ribosomal protein S9, bacterial/plastid KHQ88_06750 IPR005822 Ribosomal protein L13 KHQ88_06750 IPR005823 Ribosomal protein L13, bacterial-type KHQ88_06750 IPR023563 Ribosomal protein L13, conserved site KHQ88_06750 IPR036899 Ribosomal protein L13 superfamily KHQ88_06755 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site KHQ88_06755 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain KHQ88_06755 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding KHQ88_06755 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal KHQ88_06755 IPR014758 Methionyl-tRNA synthetase KHQ88_06755 IPR023457 Methionine-tRNA synthetase, type 2 KHQ88_06755 IPR033911 Methioninyl-tRNA synthetase core domain KHQ88_06755 IPR012340 Nucleic acid-binding, OB-fold KHQ88_06755 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold KHQ88_06755 IPR002547 tRNA-binding domain KHQ88_06755 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding KHQ88_06755 IPR015413 Methionyl/Leucyl tRNA synthetase KHQ88_06760 IPR029062 Class I glutamine amidotransferase-like KHQ88_06760 IPR002818 DJ-1/PfpI KHQ88_06765 IPR018063 SAM-dependent methyltransferase RsmI, conserved site KHQ88_06765 IPR008189 rRNA small subunit methyltransferase I KHQ88_06765 IPR014777 Tetrapyrrole methylase, subdomain 1 KHQ88_06765 IPR035996 Tetrapyrrole methylase superfamily KHQ88_06765 IPR000878 Tetrapyrrole methylase KHQ88_06765 IPR014776 Tetrapyrrole methylase, subdomain 2 KHQ88_06770 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase KHQ88_06770 IPR007848 Methyltransferase small domain KHQ88_06775 IPR007557 PSP1, C-terminal KHQ88_06780 IPR004622 DNA polymerase III, delta prime subunit KHQ88_06780 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_06780 IPR015199 DNA polymerase III, delta subunit, C-terminal KHQ88_06785 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_06785 IPR018095 Thymidylate kinase, conserved site KHQ88_06785 IPR018094 Thymidylate kinase KHQ88_06785 IPR039430 Thymidylate kinase-like domain KHQ88_06790 IPR003593 AAA+ ATPase domain KHQ88_06790 IPR003439 ABC transporter-like KHQ88_06790 IPR017871 ABC transporter, conserved site KHQ88_06790 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_06795 IPR037294 ABC transporter, BtuC-like KHQ88_06795 IPR001626 ABC transporter, TroCD-like KHQ88_06800 IPR020103 Pseudouridine synthase, catalytic domain superfamily KHQ88_06800 IPR001406 Pseudouridine synthase I, TruA KHQ88_06800 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain KHQ88_06800 IPR020095 Pseudouridine synthase I, TruA, C-terminal KHQ88_06805 IPR003339 ABC/ECF transporter, transmembrane component KHQ88_06805 IPR024919 ECF transporter transmembrane protein EcfT KHQ88_06810 IPR003593 AAA+ ATPase domain KHQ88_06810 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_06810 IPR015856 ABC transporter, CbiO/EcfA subunit KHQ88_06810 IPR017871 ABC transporter, conserved site KHQ88_06810 IPR003439 ABC transporter-like KHQ88_06810 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 KHQ88_06815 IPR003439 ABC transporter-like KHQ88_06815 IPR017871 ABC transporter, conserved site KHQ88_06815 IPR015856 ABC transporter, CbiO/EcfA subunit KHQ88_06815 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 KHQ88_06815 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_06815 IPR003593 AAA+ ATPase domain KHQ88_06825 IPR036373 Ribosomal protein L17 superfamily KHQ88_06825 IPR000456 Ribosomal protein L17 KHQ88_06830 IPR011262 DNA-directed RNA polymerase, insert domain KHQ88_06830 IPR011773 DNA-directed RNA polymerase, alpha subunit KHQ88_06830 IPR036603 RNA polymerase, RBP11-like subunit KHQ88_06830 IPR011260 RNA polymerase, alpha subunit, C-terminal KHQ88_06830 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KHQ88_06830 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type KHQ88_06835 IPR036967 Ribosomal protein S11 superfamily KHQ88_06835 IPR018102 Ribosomal S11, conserved site KHQ88_06835 IPR019981 Ribosomal protein S11, bacterial-type KHQ88_06835 IPR001971 Ribosomal protein S11 KHQ88_06840 IPR010979 Ribosomal protein S13-like, H2TH KHQ88_06840 IPR019980 Ribosomal protein S13, bacterial-type KHQ88_06840 IPR018269 Ribosomal protein S13, conserved site KHQ88_06840 IPR001892 Ribosomal protein S13 KHQ88_06840 IPR027437 30s ribosomal protein S13, C-terminal KHQ88_06845 IPR035977 Ribosomal protein L36 superfamily KHQ88_06845 IPR000473 Ribosomal protein L36 KHQ88_06850 IPR022967 RNA-binding domain, S1 KHQ88_06850 IPR012340 Nucleic acid-binding, OB-fold KHQ88_06850 IPR004368 Translation initiation factor IF-1 KHQ88_06850 IPR006196 RNA-binding domain, S1, IF1 type KHQ88_06855 IPR036005 Creatinase/aminopeptidase-like KHQ88_06855 IPR000994 Peptidase M24 KHQ88_06855 IPR001714 Peptidase M24, methionine aminopeptidase KHQ88_06855 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 KHQ88_06860 IPR006259 Adenylate kinase subfamily KHQ88_06860 IPR000850 Adenylate kinase/UMP-CMP kinase KHQ88_06860 IPR033690 Adenylate kinase, conserved site KHQ88_06860 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_06860 IPR007862 Adenylate kinase, active site lid domain KHQ88_06865 IPR030659 SecY conserved site KHQ88_06865 IPR023201 SecY domain superfamily KHQ88_06865 IPR026593 Protein translocase subunit SecY KHQ88_06865 IPR002208 SecY/SEC61-alpha family KHQ88_06870 IPR036227 Ribosomal L18e/L15P superfamily KHQ88_06870 IPR030878 Ribosomal protein L15 KHQ88_06870 IPR005749 Ribosomal protein L15, bacterial-type KHQ88_06870 IPR001196 Ribosomal protein L15, conserved site KHQ88_06870 IPR021131 Ribosomal protein L18e/L15P KHQ88_06875 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily KHQ88_06875 IPR018038 Ribosomal protein L30, conserved site KHQ88_06875 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain KHQ88_06875 IPR005996 Ribosomal protein L30, bacterial-type KHQ88_06880 IPR000851 Ribosomal protein S5 KHQ88_06880 IPR005324 Ribosomal protein S5, C-terminal KHQ88_06880 IPR020568 Ribosomal protein S5 domain 2-type fold KHQ88_06880 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup KHQ88_06880 IPR005712 Ribosomal protein S5, bacterial-type KHQ88_06880 IPR018192 Ribosomal protein S5, N-terminal, conserved site KHQ88_06880 IPR013810 Ribosomal protein S5, N-terminal KHQ88_06885 IPR005484 Ribosomal protein L18 KHQ88_06885 IPR004389 Ribosomal protein L18, bacterial-type KHQ88_06890 IPR019906 Ribosomal protein L6, bacterial-type KHQ88_06890 IPR002358 Ribosomal protein L6, conserved site KHQ88_06890 IPR020040 Ribosomal protein L6, alpha-beta domain KHQ88_06890 IPR000702 Ribosomal protein L6 KHQ88_06890 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily KHQ88_06895 IPR000630 Ribosomal protein S8 KHQ88_06895 IPR035987 Ribosomal protein S8 superfamily KHQ88_06900 IPR001209 Ribosomal protein S14 KHQ88_06900 IPR023053 Ribosomal protein S14, type Z KHQ88_06900 IPR018271 Ribosomal protein S14, conserved site KHQ88_06905 IPR002132 Ribosomal protein L5 KHQ88_06905 IPR020930 Ribosomal protein L5, bacterial-type KHQ88_06905 IPR020929 Ribosomal protein L5, conserved site KHQ88_06905 IPR022803 Ribosomal protein L5 domain superfamily KHQ88_06905 IPR031310 Ribosomal protein L5, N-terminal KHQ88_06905 IPR031309 Ribosomal protein L5, C-terminal KHQ88_06910 IPR008991 Translation protein SH3-like domain superfamily KHQ88_06910 IPR005825 Ribosomal protein L24/L26, conserved site KHQ88_06910 IPR003256 Ribosomal protein L24 KHQ88_06910 IPR014722 Ribosomal protein L2, domain 2 KHQ88_06910 IPR041988 Ribosomal Protein L26/L24, KOW domain KHQ88_06910 IPR005824 KOW KHQ88_06915 IPR005745 Ribosomal protein L14P, bacterial-type KHQ88_06915 IPR000218 Ribosomal protein L14P KHQ88_06915 IPR036853 Ribosomal protein L14 superfamily KHQ88_06915 IPR019972 Ribosomal protein L14P, conserved site KHQ88_06920 IPR012340 Nucleic acid-binding, OB-fold KHQ88_06920 IPR019984 30S ribosomal protein S17 KHQ88_06920 IPR000266 Ribosomal protein S17/S11 KHQ88_06920 IPR019979 Ribosomal protein S17, conserved site KHQ88_06925 IPR036049 Ribosomal protein L29/L35 superfamily KHQ88_06925 IPR018254 Ribosomal protein L29, conserved site KHQ88_06925 IPR001854 Ribosomal protein L29/L35 KHQ88_06930 IPR016180 Ribosomal protein L10e/L16 KHQ88_06930 IPR036920 Ribosomal protein L10e/L16 superfamily KHQ88_06930 IPR000114 Ribosomal protein L16 KHQ88_06930 IPR020798 Ribosomal protein L16, conserved site KHQ88_06935 IPR004087 K Homology domain KHQ88_06935 IPR015946 K homology domain-like, alpha/beta KHQ88_06935 IPR004044 K Homology domain, type 2 KHQ88_06935 IPR009019 K homology domain superfamily, prokaryotic type KHQ88_06935 IPR001351 Ribosomal protein S3, C-terminal KHQ88_06935 IPR036419 Ribosomal protein S3, C-terminal domain superfamily KHQ88_06935 IPR018280 Ribosomal protein S3, conserved site KHQ88_06935 IPR005704 Ribosomal protein S3, bacterial-type KHQ88_06940 IPR018260 Ribosomal protein L22/L17, conserved site KHQ88_06940 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type KHQ88_06940 IPR036394 Ribosomal protein L22/L17 superfamily KHQ88_06940 IPR001063 Ribosomal protein L22/L17 KHQ88_06945 IPR023575 Ribosomal protein S19, superfamily KHQ88_06945 IPR020934 Ribosomal protein S19 conserved site KHQ88_06945 IPR005732 Ribosomal protein S19, bacterial-type KHQ88_06945 IPR002222 Ribosomal protein S19/S15 KHQ88_06950 IPR022671 Ribosomal protein L2, conserved site KHQ88_06950 IPR022669 Ribosomal protein L2, C-terminal KHQ88_06950 IPR005880 Ribosomal protein L2, bacterial/organellar-type KHQ88_06950 IPR002171 Ribosomal protein L2 KHQ88_06950 IPR008991 Translation protein SH3-like domain superfamily KHQ88_06950 IPR022666 Ribosomal Proteins L2, RNA binding domain KHQ88_06950 IPR012340 Nucleic acid-binding, OB-fold KHQ88_06950 IPR014726 Ribosomal protein L2, domain 3 KHQ88_06950 IPR014722 Ribosomal protein L2, domain 2 KHQ88_06955 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily KHQ88_06955 IPR013025 Ribosomal protein L25/L23 KHQ88_06955 IPR012678 Ribosomal protein L23/L15e core domain superfamily KHQ88_06960 IPR013005 50S ribosomal protein uL4 KHQ88_06960 IPR002136 Ribosomal protein L4/L1e KHQ88_06960 IPR023574 Ribosomal protein L4 domain superfamily KHQ88_06965 IPR000597 Ribosomal protein L3 KHQ88_06965 IPR019927 Ribosomal protein L3, bacterial/organelle-type KHQ88_06965 IPR019926 Ribosomal protein L3, conserved site KHQ88_06965 IPR009000 Translation protein, beta-barrel domain superfamily KHQ88_06970 IPR001848 Ribosomal protein S10 KHQ88_06970 IPR027486 Ribosomal protein S10 domain KHQ88_06970 IPR036838 Ribosomal protein S10 domain superfamily KHQ88_06970 IPR018268 Ribosomal protein S10, conserved site KHQ88_06975 IPR006555 ATP-dependent helicase, C-terminal KHQ88_06975 IPR006310 3'-5' exonuclease DinG KHQ88_06975 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain KHQ88_06975 IPR013520 Exonuclease, RNase T/DNA polymerase III KHQ88_06975 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type KHQ88_06975 IPR006935 Helicase/UvrB, N-terminal KHQ88_06975 IPR036397 Ribonuclease H superfamily KHQ88_06975 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_06975 IPR012337 Ribonuclease H-like superfamily KHQ88_06975 IPR001650 Helicase, C-terminal KHQ88_06985 IPR003689 Zinc/iron permease KHQ88_06985 IPR023498 Zinc transporter ZupT KHQ88_06990 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA KHQ88_06990 IPR018211 Alcohol dehydrogenase, iron-type, conserved site KHQ88_06995 IPR030395 Glycerophosphodiester phosphodiesterase domain KHQ88_06995 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily KHQ88_07010 IPR001757 P-type ATPase KHQ88_07010 IPR023299 P-type ATPase, cytoplasmic domain N KHQ88_07010 IPR018303 P-type ATPase, phosphorylation site KHQ88_07010 IPR023298 P-type ATPase, transmembrane domain superfamily KHQ88_07010 IPR008250 P-type ATPase, A domain superfamily KHQ88_07010 IPR036412 HAD-like superfamily KHQ88_07010 IPR023214 HAD superfamily KHQ88_07010 IPR006068 Cation-transporting P-type ATPase, C-terminal KHQ88_07010 IPR004014 Cation-transporting P-type ATPase, N-terminal KHQ88_07020 IPR023210 NADP-dependent oxidoreductase domain KHQ88_07020 IPR036812 NADP-dependent oxidoreductase domain superfamily KHQ88_07020 IPR020471 Aldo/keto reductase KHQ88_07020 IPR018170 Aldo/keto reductase, conserved site KHQ88_07025 IPR003791 Protein of unknown function UPF0178 KHQ88_07045 IPR020904 Short-chain dehydrogenase/reductase, conserved site KHQ88_07045 IPR036291 NAD(P)-binding domain superfamily KHQ88_07045 IPR002347 Short-chain dehydrogenase/reductase SDR KHQ88_07050 IPR001584 Integrase, catalytic core KHQ88_07050 IPR012337 Ribonuclease H-like superfamily KHQ88_07050 IPR036397 Ribonuclease H superfamily KHQ88_07050 IPR025948 HTH-like domain KHQ88_07065 IPR042229 Listeria-Bacteroides repeat domain superfamily KHQ88_07065 IPR013378 Listeria/Bacterioides repeat KHQ88_07065 IPR011493 GLUG KHQ88_07135 IPR003115 ParB/Sulfiredoxin KHQ88_07135 IPR004437 ParB/RepB/Spo0J partition protein KHQ88_07135 IPR036086 ParB/Sulfiredoxin superfamily KHQ88_07135 IPR041468 ParB/Spo0J, HTH domain KHQ88_07155 IPR003682 rRNA small subunit methyltransferase G KHQ88_07155 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase KHQ88_07160 IPR020595 MnmG-related, conserved site KHQ88_07160 IPR026904 GidA associated domain 3 KHQ88_07160 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG KHQ88_07160 IPR036188 FAD/NAD(P)-binding domain superfamily KHQ88_07160 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related KHQ88_07165 IPR023214 HAD superfamily KHQ88_07165 IPR036412 HAD-like superfamily KHQ88_07165 IPR006379 HAD-superfamily hydrolase, subfamily IIB KHQ88_07165 IPR000150 Cof family KHQ88_07175 IPR016192 APOBEC/CMP deaminase, zinc-binding KHQ88_07175 IPR002125 Cytidine and deoxycytidylate deaminase domain KHQ88_07175 IPR028883 tRNA-specific adenosine deaminase KHQ88_07175 IPR016193 Cytidine deaminase-like KHQ88_07180 IPR020633 Thymidine kinase, conserved site KHQ88_07180 IPR001267 Thymidine kinase KHQ88_07180 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_07185 IPR027491 Ribosomal protein L31 type A KHQ88_07185 IPR002150 Ribosomal protein L31 KHQ88_07185 IPR034704 L28p-like KHQ88_07185 IPR042105 Ribosomal protein L31 superfamily KHQ88_07190 IPR036291 NAD(P)-binding domain superfamily KHQ88_07190 IPR015884 Malic enzyme, conserved site KHQ88_07190 IPR012301 Malic enzyme, N-terminal domain KHQ88_07190 IPR037062 Malic enzyme, N-terminal domain superfamily KHQ88_07190 IPR012302 Malic enzyme, NAD-binding KHQ88_07190 IPR001891 Malic oxidoreductase KHQ88_07195 IPR029001 Inosine triphosphate pyrophosphatase-like KHQ88_07195 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein KHQ88_07200 IPR012094 tRNA(Ile)-lysidine synthase KHQ88_07200 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal KHQ88_07200 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold KHQ88_07200 IPR029057 Phosphoribosyltransferase-like KHQ88_07200 IPR000836 Phosphoribosyltransferase domain KHQ88_07200 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal KHQ88_07200 IPR005904 Hypoxanthine phosphoribosyl transferase KHQ88_07200 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal KHQ88_07205 IPR003960 ATPase, AAA-type, conserved site KHQ88_07205 IPR005936 Peptidase, FtsH KHQ88_07205 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_07205 IPR000642 Peptidase M41 KHQ88_07205 IPR037219 Peptidase M41-like KHQ88_07205 IPR003959 ATPase, AAA-type, core KHQ88_07205 IPR041569 AAA ATPase, AAA+ lid domain KHQ88_07205 IPR003593 AAA+ ATPase domain KHQ88_07210 IPR025490 RNA-binding protein, HP1423 type KHQ88_07210 IPR002942 RNA-binding S4 domain KHQ88_07210 IPR036986 RNA-binding S4 domain superfamily KHQ88_07220 IPR006195 Aminoacyl-tRNA synthetase, class II KHQ88_07220 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type KHQ88_07220 IPR012340 Nucleic acid-binding, OB-fold KHQ88_07220 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) KHQ88_07220 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal KHQ88_07220 IPR002313 Lysine-tRNA ligase, class II KHQ88_07220 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II KHQ88_07245 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 KHQ88_07245 IPR000771 Fructose-bisphosphate aldolase, class-II KHQ88_07245 IPR013785 Aldolase-type TIM barrel KHQ88_07250 IPR036059 Metalloprotease TldD/PmbA superfamily KHQ88_07250 IPR002510 Metalloprotease TldD/PmbA KHQ88_07250 IPR035068 Metalloprotease TldD/PmbA, N-terminal KHQ88_07255 IPR036059 Metalloprotease TldD/PmbA superfamily KHQ88_07255 IPR035068 Metalloprotease TldD/PmbA, N-terminal KHQ88_07255 IPR002510 Metalloprotease TldD/PmbA KHQ88_07255 IPR025502 TldD KHQ88_07260 IPR001333 Peptidase M32, carboxypeptidase Taq KHQ88_07270 IPR003841 Sodium-dependent phosphate transport protein KHQ88_07270 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein KHQ88_07275 IPR001667 DDH domain KHQ88_07275 IPR038763 DHH phosphoesterase superfamily KHQ88_07275 IPR003156 DHHA1 domain KHQ88_07285 IPR007346 Endonuclease I KHQ88_07305 IPR035906 MetI-like superfamily KHQ88_07305 IPR000515 ABC transporter type 1, transmembrane domain MetI-like KHQ88_07310 IPR000515 ABC transporter type 1, transmembrane domain MetI-like KHQ88_07310 IPR035906 MetI-like superfamily KHQ88_07315 IPR040582 MalK, OB fold domain KHQ88_07315 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC KHQ88_07315 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_07315 IPR008995 Molybdate/tungstate binding, C-terminal KHQ88_07315 IPR017871 ABC transporter, conserved site KHQ88_07315 IPR003439 ABC transporter-like KHQ88_07315 IPR003593 AAA+ ATPase domain KHQ88_07325 IPR035437 SNase-like, OB-fold superfamily KHQ88_07325 IPR002071 Thermonuclease active site KHQ88_07325 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold KHQ88_07335 IPR000093 DNA recombination protein RecR KHQ88_07335 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 KHQ88_07335 IPR023627 Recombination protein RecR KHQ88_07335 IPR023628 Recombination protein RecR, C4-type zinc finger KHQ88_07335 IPR015967 Recombination protein RecR, conserved site KHQ88_07335 IPR006171 TOPRIM domain KHQ88_07335 IPR034137 RecR, TOPRIM domain KHQ88_07340 IPR004401 Nucleoid-associated protein YbaB/EbfC family KHQ88_07340 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily KHQ88_07345 IPR022754 DNA polymerase III, gamma subunit, domain III KHQ88_07345 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_07345 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal KHQ88_07345 IPR001270 ClpA/B family KHQ88_07345 IPR012763 DNA polymerase III, subunit gamma/ tau KHQ88_07345 IPR003593 AAA+ ATPase domain KHQ88_07355 IPR031168 TrmE-type guanine nucleotide-binding domain KHQ88_07355 IPR018948 GTP-binding protein TrmE, N-terminal KHQ88_07355 IPR006073 GTP binding domain KHQ88_07355 IPR004520 tRNA modification GTPase MnmE KHQ88_07355 IPR027368 tRNA modification GTPase MnmE domain 2 KHQ88_07355 IPR025867 MnmE, helical domain KHQ88_07355 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_07355 IPR005225 Small GTP-binding protein domain KHQ88_07355 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 KHQ88_07360 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase KHQ88_07360 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type KHQ88_07360 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal KHQ88_07360 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold KHQ88_07380 IPR001107 Band 7 domain KHQ88_07380 IPR036013 Band 7/SPFH domain superfamily KHQ88_07380 IPR018080 Band 7/stomatin-like, conserved site KHQ88_07380 IPR001972 Stomatin family KHQ88_07395 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) KHQ88_07395 IPR006195 Aminoacyl-tRNA synthetase, class II KHQ88_07395 IPR004522 Asparagine-tRNA ligase KHQ88_07395 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb KHQ88_07395 IPR012340 Nucleic acid-binding, OB-fold KHQ88_07395 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type KHQ88_07405 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site KHQ88_07405 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KHQ88_07405 IPR000836 Phosphoribosyltransferase domain KHQ88_07405 IPR005946 Ribose-phosphate pyrophosphokinase KHQ88_07405 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type KHQ88_07405 IPR029057 Phosphoribosyltransferase-like KHQ88_07410 IPR036751 Stage V sporulation protein G superfamily KHQ88_07410 IPR007170 Stage V sporulation protein G KHQ88_07415 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase KHQ88_07415 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup KHQ88_07415 IPR020568 Ribosomal protein S5 domain 2-type fold KHQ88_07415 IPR006204 GHMP kinase N-terminal domain KHQ88_07415 IPR013750 GHMP kinase, C-terminal domain KHQ88_07415 IPR036554 GHMP kinase, C-terminal domain superfamily KHQ88_07425 IPR036775 DNA polymerase, Y-family, little finger domain superfamily KHQ88_07425 IPR017961 DNA polymerase, Y-family, little finger domain KHQ88_07425 IPR024728 DNA polymerase type-Y, HhH motif KHQ88_07425 IPR001126 UmuC domain KHQ88_07430 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KHQ88_07430 IPR036291 NAD(P)-binding domain superfamily KHQ88_07430 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase KHQ88_07430 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KHQ88_07435 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta KHQ88_07435 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KHQ88_07435 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase KHQ88_07435 IPR036968 Enolpyruvate transferase domain superfamily KHQ88_07435 IPR001986 Enolpyruvate transferase domain KHQ88_07440 IPR030960 3-dehydroquinate synthase domain KHQ88_07440 IPR016037 3-dehydroquinate synthase AroB KHQ88_07440 IPR030963 3-dehydroquinate synthase family KHQ88_07445 IPR020541 Chorismate synthase, conserved site KHQ88_07445 IPR035904 Chorismate synthase AroC superfamily KHQ88_07445 IPR000453 Chorismate synthase KHQ88_07450 IPR022893 Shikimate dehydrogenase family KHQ88_07450 IPR036291 NAD(P)-binding domain superfamily KHQ88_07450 IPR011342 Shikimate dehydrogenase KHQ88_07450 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal KHQ88_07455 IPR018509 Dehydroquinase, class II, conserved site KHQ88_07455 IPR036441 Dehydroquinase, class II superfamily KHQ88_07455 IPR001874 Dehydroquinase, class II KHQ88_07460 IPR013785 Aldolase-type TIM barrel KHQ88_07460 IPR006218 DAHP synthetase I/KDSA KHQ88_07460 IPR041071 DAHP synthase ferredoxin-like domain KHQ88_07460 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 KHQ88_07475 IPR003439 ABC transporter-like KHQ88_07475 IPR003593 AAA+ ATPase domain KHQ88_07475 IPR032781 ABC-transporter extension domain KHQ88_07475 IPR017871 ABC transporter, conserved site KHQ88_07475 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_07475 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily KHQ88_07480 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal KHQ88_07480 IPR022637 DNA polymerase III, beta sliding clamp, central KHQ88_07480 IPR001001 DNA polymerase III, beta sliding clamp KHQ88_07480 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal KHQ88_07485 IPR013159 Chromosomal replication initiator, DnaA C-terminal KHQ88_07485 IPR024633 DnaA N-terminal domain KHQ88_07485 IPR027417 P-loop containing nucleoside triphosphate hydrolase KHQ88_07485 IPR038454 DnaA, N-terminal domain superfamily KHQ88_07485 IPR013317 Chromosomal replication initiator protein DnaA KHQ88_07485 IPR018312 Chromosomal replication control, initiator DnaA, conserved site KHQ88_07485 IPR010921 Trp repressor/replication initiator KHQ88_07485 IPR001957 Chromosomal replication control, initiator DnaA KHQ88_07485 IPR003593 AAA+ ATPase domain KHQ88_07485 IPR020591 Chromosomal replication control, initiator DnaA-like KHQ88_07490 IPR000271 Ribosomal protein L34 KHQ88_07490 IPR020939 Ribosomal protein L34, conserved site KHQ88_07495 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup KHQ88_07495 IPR000100 Ribonuclease P KHQ88_07495 IPR020539 Ribonuclease P, conserved site KHQ88_07495 IPR020568 Ribosomal protein S5 domain 2-type fold KHQ88_07500 IPR028055 Membrane insertase YidC/Oxa1, C-terminal KHQ88_07500 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 KHQ88_07500 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes KHQ88_07510 IPR001328 Peptidyl-tRNA hydrolase KHQ88_07510 IPR018171 Peptidyl-tRNA hydrolase, conserved site KHQ88_07510 IPR036416 Peptidyl-tRNA hydrolase superfamily KHQ88_07515 IPR001310 Histidine triad (HIT) protein KHQ88_07515 IPR036265 HIT-like superfamily KHQ88_07515 IPR011146 HIT-like domain KHQ88_07515 IPR019808 Histidine triad, conserved site KHQ88_07515 IPR039384 HINT family KHQ88_07520 IPR023198 Phosphoglycolate phosphatase-like, domain 2 KHQ88_07520 IPR023733 Pyrophosphatase PpaX KHQ88_07520 IPR036412 HAD-like superfamily KHQ88_07520 IPR006439 HAD hydrolase, subfamily IA KHQ88_07520 IPR006549 HAD-superfamily hydrolase,subfamily IIIA KHQ88_07520 IPR041492 Haloacid dehalogenase-like hydrolase KHQ88_07520 IPR023214 HAD superfamily KHQ88_07525 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal KHQ88_07525 IPR005218 Diacylglycerol/lipid kinase KHQ88_07525 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily KHQ88_07525 IPR001206 Diacylglycerol kinase, catalytic domain KHQ88_07530 IPR025156 Ribonuclease M5, C-terminal domain KHQ88_07530 IPR006171 TOPRIM domain KHQ88_07530 IPR004466 Ribonuclease M5 KHQ88_07535 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm KHQ88_07535 IPR023165 rRNA adenine dimethylase-like KHQ88_07535 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site KHQ88_07535 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal KHQ88_07535 IPR011530 Ribosomal RNA adenine dimethylase KHQ88_07535 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase KHQ88_07540 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 KHQ88_07540 IPR015424 Pyridoxal phosphate-dependent transferase KHQ88_07540 IPR015421 Pyridoxal phosphate-dependent transferase, major domain KHQ88_07540 IPR001085 Serine hydroxymethyltransferase KHQ88_07540 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site KHQ88_07540 IPR039429 Serine hydroxymethyltransferase-like domain KHQ88_07545 IPR016153 Heat shock protein Hsp33, N-terminal KHQ88_07545 IPR016154 Heat shock protein Hsp33, C-terminal KHQ88_07545 IPR000397 Heat shock protein Hsp33 KHQ88_07550 IPR013785 Aldolase-type TIM barrel KHQ88_07550 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 KHQ88_07550 IPR018517 tRNA-dihydrouridine synthase, conserved site KHQ88_07550 IPR001269 tRNA-dihydrouridine synthase KHQ88_07550 IPR035587 DUS-like, FMN-binding domain KHQ88_07550 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal KHQ88_07570 IPR029044 Nucleotide-diphospho-sugar transferases KHQ88_07570 IPR001173 Glycosyltransferase 2-like KHQ88_07580 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily KHQ88_07580 IPR034701 Diadenylate cyclase CdaA KHQ88_07580 IPR014046 Diadenylate cyclase KHQ88_07580 IPR003390 DNA integrity scanning protein, DisA, N-terminal KHQ88_07595 IPR036291 NAD(P)-binding domain superfamily KHQ88_07595 IPR034683 Cytidylyltransferase IspD/TarI KHQ88_07595 IPR029044 Nucleotide-diphospho-sugar transferases KHQ88_07595 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KHQ88_07595 IPR002347 Short-chain dehydrogenase/reductase SDR KHQ88_07595 IPR020904 Short-chain dehydrogenase/reductase, conserved site KHQ88_07595 IPR012115 Bifunctional ribulose 5-phosphate reductase/CDP-ribitol pyrophosphorylase KHQ88_07600 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily KHQ88_07600 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase KHQ88_07600 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site KHQ88_07610 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal KHQ88_07610 IPR034904 Fe-S cluster assembly domain superfamily KHQ88_07615 IPR036681 PgpA-like superfamily KHQ88_07615 IPR026038 Putative phosphatidylglycerophosphatase KHQ88_07615 IPR007686 YutG/PgpA domain