locus-tag class description KHQ82_00055 PF02899 Phage integrase, N-terminal SAM-like domain KHQ82_00055 PF00589 Phage integrase family KHQ82_00065 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KHQ82_00065 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KHQ82_00070 PF00664 ABC transporter transmembrane region KHQ82_00070 PF00005 ABC transporter KHQ82_00075 PF00664 ABC transporter transmembrane region KHQ82_00075 PF00005 ABC transporter KHQ82_00085 PF00696 Amino acid kinase family KHQ82_00105 PF00005 ABC transporter KHQ82_00110 PF00440 Bacterial regulatory proteins, tetR family KHQ82_00120 PF00293 NUDIX domain KHQ82_00125 PF00730 HhH-GPD superfamily base excision DNA repair protein KHQ82_00135 PF02417 Chromate transporter KHQ82_00145 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KHQ82_00145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KHQ82_00165 PF01967 MoaC family KHQ82_00170 PF06463 Molybdenum Cofactor Synthesis C KHQ82_00170 PF04055 Radical SAM superfamily KHQ82_00175 PF00994 Probable molybdopterin binding domain KHQ82_00175 PF03454 MoeA C-terminal region (domain IV) KHQ82_00175 PF03453 MoeA N-terminal region (domain I and II) KHQ82_00180 PF03453 MoeA N-terminal region (domain I and II) KHQ82_00180 PF00994 Probable molybdopterin binding domain KHQ82_00180 PF03454 MoeA C-terminal region (domain IV) KHQ82_00185 PF00005 ABC transporter KHQ82_00185 PF08402 TOBE domain KHQ82_00190 PF00528 Binding-protein-dependent transport system inner membrane component KHQ82_00195 PF12849 PBP superfamily domain KHQ82_00200 PF00994 Probable molybdopterin binding domain KHQ82_00205 PF00581 Rhodanese-like domain KHQ82_00205 PF00899 ThiF family KHQ82_00225 PF00581 Rhodanese-like domain KHQ82_00240 PF13382 Adenine deaminase C-terminal domain KHQ82_00240 PF01979 Amidohydrolase family KHQ82_00245 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KHQ82_00245 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KHQ82_00250 PF00111 2Fe-2S iron-sulfur cluster binding domain KHQ82_00250 PF01799 [2Fe-2S] binding domain KHQ82_00255 PF03450 CO dehydrogenase flavoprotein C-terminal domain KHQ82_00255 PF00941 FAD binding domain in molybdopterin dehydrogenase KHQ82_00260 PF01979 Amidohydrolase family KHQ82_00270 PF00860 Permease family KHQ82_00280 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain KHQ82_00280 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 KHQ82_00295 PF00899 ThiF family KHQ82_00305 PF02625 XdhC and CoxI family KHQ82_00305 PF13478 XdhC Rossmann domain KHQ82_00310 PF02625 XdhC and CoxI family KHQ82_00310 PF13478 XdhC Rossmann domain KHQ82_00320 PF00860 Permease family KHQ82_00325 PF01979 Amidohydrolase family KHQ82_00330 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KHQ82_00330 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHQ82_00335 PF01979 Amidohydrolase family KHQ82_00340 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KHQ82_00340 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KHQ82_00345 PF07687 Peptidase dimerisation domain KHQ82_00345 PF01546 Peptidase family M20/M25/M40 KHQ82_00350 PF00291 Pyridoxal-phosphate dependent enzyme KHQ82_00360 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KHQ82_00360 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KHQ82_00365 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KHQ82_00365 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KHQ82_00370 PF00941 FAD binding domain in molybdopterin dehydrogenase KHQ82_00370 PF03450 CO dehydrogenase flavoprotein C-terminal domain KHQ82_00375 PF01799 [2Fe-2S] binding domain KHQ82_00375 PF00111 2Fe-2S iron-sulfur cluster binding domain KHQ82_00385 PF00665 Integrase core domain KHQ82_00385 PF13276 HTH-like domain KHQ82_00385 PF13333 Integrase core domain KHQ82_00400 PF04556 DpnII restriction endonuclease KHQ82_00405 PF02086 D12 class N6 adenine-specific DNA methyltransferase KHQ82_00410 PF01555 DNA methylase KHQ82_00415 PF01555 DNA methylase KHQ82_00420 PF01555 DNA methylase KHQ82_00505 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHQ82_00505 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KHQ82_00510 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KHQ82_00515 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KHQ82_00520 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KHQ82_00525 PF00146 NADH dehydrogenase KHQ82_00530 PF00361 Proton-conducting membrane transporter KHQ82_00535 PF00361 Proton-conducting membrane transporter KHQ82_00540 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KHQ82_00545 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KHQ82_00560 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KHQ82_00565 PF01899 Na+/H+ ion antiporter subunit KHQ82_00575 PF03313 Serine dehydratase alpha chain KHQ82_00590 PF07690 Major Facilitator Superfamily KHQ82_00595 PF01156 Inosine-uridine preferring nucleoside hydrolase KHQ82_00605 PF12558 ATP-binding cassette cobalt transporter KHQ82_00605 PF00005 ABC transporter KHQ82_00610 PF00005 ABC transporter KHQ82_00615 PF02361 Cobalt transport protein KHQ82_00625 PF01156 Inosine-uridine preferring nucleoside hydrolase KHQ82_00630 PF01156 Inosine-uridine preferring nucleoside hydrolase KHQ82_00635 PF01156 Inosine-uridine preferring nucleoside hydrolase KHQ82_00640 PF00294 pfkB family carbohydrate kinase KHQ82_00645 PF00356 Bacterial regulatory proteins, lacI family KHQ82_00650 PF02445 Quinolinate synthetase A protein KHQ82_00655 PF00890 FAD binding domain KHQ82_00660 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KHQ82_00660 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KHQ82_00665 PF02592 Putative vitamin uptake transporter KHQ82_00670 PF02915 Rubrerythrin KHQ82_00675 PF02595 Glycerate kinase family KHQ82_00680 PF02447 GntP family permease KHQ82_00685 PF05651 Putative sugar diacid recognition KHQ82_00685 PF17853 GGDEF-like domain KHQ82_00685 PF13556 PucR C-terminal helix-turn-helix domain KHQ82_00690 PF00842 Alanine racemase, C-terminal domain KHQ82_00690 PF01168 Alanine racemase, N-terminal domain KHQ82_00695 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KHQ82_00695 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KHQ82_00705 PF01168 Alanine racemase, N-terminal domain KHQ82_00710 PF13941 MutL protein KHQ82_00715 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase KHQ82_00715 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit KHQ82_00715 PF02310 B12 binding domain KHQ82_00720 PF16552 D-ornithine 4,5-aminomutase alpha-subunit KHQ82_00725 PF02645 Uncharacterised protein, DegV family COG1307 KHQ82_00730 PF00291 Pyridoxal-phosphate dependent enzyme KHQ82_00750 PF03551 Transcriptional regulator PadR-like family KHQ82_00775 PF01636 Phosphotransferase enzyme family KHQ82_00785 PF00005 ABC transporter KHQ82_00795 PF11862 Domain of unknown function (DUF3382) KHQ82_00795 PF02653 Branched-chain amino acid transport system / permease component KHQ82_00800 PF02653 Branched-chain amino acid transport system / permease component KHQ82_00805 PF13458 Periplasmic binding protein KHQ82_00820 PF03006 Haemolysin-III related KHQ82_00825 PF02645 Uncharacterised protein, DegV family COG1307 KHQ82_00830 PF00528 Binding-protein-dependent transport system inner membrane component KHQ82_00835 PF00005 ABC transporter KHQ82_00850 PF03309 Type III pantothenate kinase KHQ82_00855 PF03063 Prismane/CO dehydrogenase family KHQ82_00865 PF00258 Flavodoxin KHQ82_00890 PF01381 Helix-turn-helix KHQ82_00905 PF00465 Iron-containing alcohol dehydrogenase KHQ82_00920 PF00440 Bacterial regulatory proteins, tetR family KHQ82_00940 PF02653 Branched-chain amino acid transport system / permease component KHQ82_00945 PF02653 Branched-chain amino acid transport system / permease component KHQ82_00950 PF00005 ABC transporter KHQ82_00955 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KHQ82_00955 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KHQ82_00960 PF01546 Peptidase family M20/M25/M40 KHQ82_00960 PF07687 Peptidase dimerisation domain KHQ82_00975 PF00291 Pyridoxal-phosphate dependent enzyme KHQ82_00985 PF00005 ABC transporter KHQ82_00985 PF02687 FtsX-like permease family KHQ82_00985 PF12704 MacB-like periplasmic core domain KHQ82_00995 PF00005 ABC transporter KHQ82_00995 PF02687 FtsX-like permease family KHQ82_00995 PF12704 MacB-like periplasmic core domain KHQ82_01010 PF04231 Endonuclease I KHQ82_01030 PF00392 Bacterial regulatory proteins, gntR family KHQ82_01035 PF01979 Amidohydrolase family KHQ82_01040 PF01048 Phosphorylase superfamily KHQ82_01045 PF01048 Phosphorylase superfamily KHQ82_01050 PF02653 Branched-chain amino acid transport system / permease component KHQ82_01055 PF02653 Branched-chain amino acid transport system / permease component KHQ82_01060 PF00005 ABC transporter KHQ82_01065 PF02608 ABC transporter substrate-binding protein PnrA-like KHQ82_01070 PF01979 Amidohydrolase family KHQ82_01075 PF00005 ABC transporter KHQ82_01080 PF12704 MacB-like periplasmic core domain KHQ82_01080 PF02687 FtsX-like permease family KHQ82_01080 PF00005 ABC transporter KHQ82_01085 PF07497 Rho termination factor, RNA-binding domain KHQ82_01085 PF07498 Rho termination factor, N-terminal domain KHQ82_01085 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KHQ82_01105 PF00561 alpha/beta hydrolase fold KHQ82_01110 PF01209 ubiE/COQ5 methyltransferase family KHQ82_01145 PF00085 Thioredoxin KHQ82_01150 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHQ82_01155 PF02028 BCCT, betaine/carnitine/choline family transporter KHQ82_01165 PF09338 Glycine/sarcosine/betaine reductase component B subunits KHQ82_01175 PF09997 Predicted membrane protein (DUF2238) KHQ82_01180 PF13333 Integrase core domain KHQ82_01180 PF13276 HTH-like domain KHQ82_01180 PF00665 Integrase core domain KHQ82_01190 PF02554 Carbon starvation protein CstA KHQ82_01195 PF04397 LytTr DNA-binding domain KHQ82_01195 PF00072 Response regulator receiver domain KHQ82_01200 PF07694 5TMR of 5TMR-LYT KHQ82_01200 PF13492 GAF domain KHQ82_01200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHQ82_01200 PF06580 Histidine kinase KHQ82_01210 PF00072 Response regulator receiver domain KHQ82_01210 PF00486 Transcriptional regulatory protein, C terminal KHQ82_01215 PF00512 His Kinase A (phospho-acceptor) domain KHQ82_01215 PF18719 ArlS sensor domain KHQ82_01215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHQ82_01225 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KHQ82_01225 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KHQ82_01235 PF00005 ABC transporter KHQ82_01240 PF00005 ABC transporter KHQ82_01250 PF00293 NUDIX domain KHQ82_01265 PF01638 HxlR-like helix-turn-helix KHQ82_01280 PF00583 Acetyltransferase (GNAT) family KHQ82_01285 PF00005 ABC transporter KHQ82_01290 PF00005 ABC transporter KHQ82_01295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHQ82_01295 PF00989 PAS fold KHQ82_01295 PF17203 Single cache domain 3 KHQ82_01295 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KHQ82_01300 PF00072 Response regulator receiver domain KHQ82_01300 PF04397 LytTr DNA-binding domain KHQ82_01355 PF04015 Domain of unknown function (DUF362) KHQ82_01360 PF01523 Putative modulator of DNA gyrase KHQ82_01365 PF01523 Putative modulator of DNA gyrase KHQ82_01370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KHQ82_01370 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHQ82_01375 PF01266 FAD dependent oxidoreductase KHQ82_01375 PF00355 Rieske [2Fe-2S] domain KHQ82_01390 PF01545 Cation efflux family KHQ82_01390 PF16916 Dimerisation domain of Zinc Transporter KHQ82_01400 PF02926 THUMP domain KHQ82_01400 PF01170 Putative RNA methylase family UPF0020 KHQ82_01415 PF00072 Response regulator receiver domain KHQ82_01420 PF02223 Thymidylate kinase KHQ82_01425 PF04286 Protein of unknown function (DUF445) KHQ82_01435 PF03062 MBOAT, membrane-bound O-acyltransferase family KHQ82_01445 PF06445 GyrI-like small molecule binding domain KHQ82_01445 PF12833 Helix-turn-helix domain KHQ82_01450 PF00293 NUDIX domain KHQ82_01460 PF00528 Binding-protein-dependent transport system inner membrane component KHQ82_01465 PF00528 Binding-protein-dependent transport system inner membrane component KHQ82_01470 PF00005 ABC transporter KHQ82_01475 PF02872 5'-nucleotidase, C-terminal domain KHQ82_01475 PF00149 Calcineurin-like phosphoesterase KHQ82_01485 PF00561 alpha/beta hydrolase fold KHQ82_01490 PF00561 alpha/beta hydrolase fold KHQ82_01495 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KHQ82_01495 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KHQ82_01505 PF00005 ABC transporter KHQ82_01510 PF00005 ABC transporter KHQ82_01510 PF12399 Branched-chain amino acid ATP-binding cassette transporter KHQ82_01525 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KHQ82_01525 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KHQ82_01535 PF02803 Thiolase, C-terminal domain KHQ82_01535 PF00108 Thiolase, N-terminal domain KHQ82_01545 PF00528 Binding-protein-dependent transport system inner membrane component KHQ82_01550 PF00005 ABC transporter KHQ82_01555 PF00497 Bacterial extracellular solute-binding proteins, family 3 KHQ82_01570 PF14398 YheC/D like ATP-grasp KHQ82_01580 PF01225 Mur ligase family, catalytic domain KHQ82_01580 PF02875 Mur ligase family, glutamate ligase domain KHQ82_01580 PF08245 Mur ligase middle domain KHQ82_01605 PF00005 ABC transporter KHQ82_01605 PF13732 Domain of unknown function (DUF4162) KHQ82_01610 PF02308 MgtC family KHQ82_01615 PF00155 Aminotransferase class I and II KHQ82_01620 PF08240 Alcohol dehydrogenase GroES-like domain KHQ82_01620 PF00107 Zinc-binding dehydrogenase KHQ82_01630 PF00873 AcrB/AcrD/AcrF family KHQ82_01645 PF00155 Aminotransferase class I and II KHQ82_01665 PF02517 CPBP intramembrane metalloprotease KHQ82_01675 PF00892 EamA-like transporter family KHQ82_01705 PF01144 Coenzyme A transferase KHQ82_01710 PF01144 Coenzyme A transferase KHQ82_01715 PF02310 B12 binding domain KHQ82_01715 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase KHQ82_01720 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit KHQ82_01730 PF12544 Lysine-2,3-aminomutase KHQ82_01730 PF04055 Radical SAM superfamily KHQ82_01735 PF02567 Phenazine biosynthesis-like protein KHQ82_01745 PF05853 beta-keto acid cleavage enzyme KHQ82_01750 PF03061 Thioesterase superfamily KHQ82_01755 PF02535 ZIP Zinc transporter KHQ82_01760 PF01575 MaoC like domain KHQ82_01765 PF01244 Membrane dipeptidase (Peptidase family M19) KHQ82_01775 PF03190 Protein of unknown function, DUF255 KHQ82_01800 PF02803 Thiolase, C-terminal domain KHQ82_01800 PF00108 Thiolase, N-terminal domain KHQ82_01805 PF02667 Short chain fatty acid transporter KHQ82_01810 PF01144 Coenzyme A transferase KHQ82_01815 PF01144 Coenzyme A transferase KHQ82_01850 PF01797 Transposase IS200 like KHQ82_01945 PF08486 Stage II sporulation protein KHQ82_01950 PF09371 Tex-like protein N-terminal domain KHQ82_01950 PF17674 HHH domain KHQ82_01950 PF00575 S1 RNA binding domain KHQ82_01950 PF16921 Tex protein YqgF-like domain KHQ82_01960 PF04070 Domain of unknown function (DUF378) KHQ82_01965 PF01381 Helix-turn-helix KHQ82_01970 PF14527 WhiA LAGLIDADG-like domain KHQ82_01970 PF10298 WhiA N-terminal LAGLIDADG-like domain KHQ82_01970 PF02650 WhiA C-terminal HTH domain KHQ82_01975 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHQ82_01980 PF01790 Prolipoprotein diacylglyceryl transferase KHQ82_01990 PF17760 UvrA interaction domain KHQ82_01990 PF17755 UvrA DNA-binding domain KHQ82_02005 PF01476 LysM domain KHQ82_02005 PF01510 N-acetylmuramoyl-L-alanine amidase KHQ82_02005 PF01471 Putative peptidoglycan binding domain KHQ82_02010 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase KHQ82_02010 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase KHQ82_02015 PF08218 Citrate lyase ligase C-terminal domain KHQ82_02020 PF04223 Citrate lyase, alpha subunit (CitF) KHQ82_02025 PF03328 HpcH/HpaI aldolase/citrate lyase family KHQ82_02030 PF06857 Malonate decarboxylase delta subunit (MdcD) KHQ82_02035 PF07476 Methylaspartate ammonia-lyase C-terminus KHQ82_02035 PF05034 Methylaspartate ammonia-lyase N-terminus KHQ82_02040 PF06368 Methylaspartate mutase E chain (MutE) KHQ82_02045 PF13941 MutL protein KHQ82_02050 PF02310 B12 binding domain KHQ82_02055 PF00533 BRCA1 C Terminus (BRCT) domain KHQ82_02055 PF01653 NAD-dependent DNA ligase adenylation domain KHQ82_02055 PF03120 NAD-dependent DNA ligase OB-fold domain KHQ82_02055 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KHQ82_02055 PF12826 Helix-hairpin-helix motif KHQ82_02065 PF13361 UvrD-like helicase C-terminal domain KHQ82_02065 PF00580 UvrD/REP helicase N-terminal domain KHQ82_02070 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KHQ82_02070 PF00749 tRNA synthetases class I (E and Q), catalytic domain KHQ82_02080 PF07977 FabA-like domain KHQ82_02085 PF00109 Beta-ketoacyl synthase, N-terminal domain KHQ82_02085 PF02801 Beta-ketoacyl synthase, C-terminal domain KHQ82_02095 PF00698 Acyl transferase domain KHQ82_02100 PF03060 Nitronate monooxygenase KHQ82_02105 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KHQ82_02105 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KHQ82_02110 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KHQ82_02115 PF17848 Acetyl-coA carboxylase zinc finger domain KHQ82_02115 PF01039 Carboxyl transferase domain KHQ82_02120 PF02785 Biotin carboxylase C-terminal domain KHQ82_02120 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KHQ82_02120 PF00289 Biotin carboxylase, N-terminal domain KHQ82_02125 PF00364 Biotin-requiring enzyme KHQ82_02130 PF00550 Phosphopantetheine attachment site KHQ82_02135 PF03060 Nitronate monooxygenase KHQ82_02140 PF08279 HTH domain KHQ82_02140 PF03099 Biotin/lipoate A/B protein ligase family KHQ82_02140 PF02237 Biotin protein ligase C terminal domain KHQ82_02160 PF01022 Bacterial regulatory protein, arsR family KHQ82_02170 PF00814 Glycoprotease family KHQ82_02180 PF00814 Glycoprotease family KHQ82_02185 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KHQ82_02190 PF01520 N-acetylmuramoyl-L-alanine amidase KHQ82_02200 PF00575 S1 RNA binding domain KHQ82_02205 PF04608 Phosphatidylglycerophosphatase A KHQ82_02210 PF01106 NifU-like domain KHQ82_02215 PF06265 Protein of unknown function (DUF1027) KHQ82_02225 PF08827 Domain of unknown function (DUF1805) KHQ82_02230 PF00571 CBS domain KHQ82_02240 PF06271 RDD family KHQ82_02245 PF02542 YgbB family KHQ82_02250 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KHQ82_02255 PF01812 5-formyltetrahydrofolate cyclo-ligase family KHQ82_02265 PF02142 MGS-like domain KHQ82_02275 PF02457 DisA bacterial checkpoint controller nucleotide-binding KHQ82_02290 PF10431 C-terminal, D2-small domain, of ClpB protein KHQ82_02290 PF07724 AAA domain (Cdc48 subfamily) KHQ82_02290 PF00004 ATPase family associated with various cellular activities (AAA) KHQ82_02290 PF17871 AAA lid domain KHQ82_02290 PF02861 Clp amino terminal domain, pathogenicity island component KHQ82_02295 PF00317 Ribonucleotide reductase, all-alpha domain KHQ82_02295 PF02867 Ribonucleotide reductase, barrel domain KHQ82_02295 PF03477 ATP cone domain KHQ82_02300 PF04055 Radical SAM superfamily KHQ82_02300 PF08497 Radical SAM N-terminal KHQ82_02300 PF11842 Domain of unknown function (DUF3362) KHQ82_02310 PF01207 Dihydrouridine synthase (Dus) KHQ82_02315 PF01430 Hsp33 protein KHQ82_02320 PF05343 M42 glutamyl aminopeptidase KHQ82_02340 PF03193 RsgA GTPase KHQ82_02345 PF04389 Peptidase family M28 KHQ82_02350 PF04389 Peptidase family M28 KHQ82_02365 PF00719 Inorganic pyrophosphatase KHQ82_02405 PF02545 Maf-like protein KHQ82_02410 PF11700 Vacuole effluxer Atg22 like KHQ82_02420 PF01975 Survival protein SurE KHQ82_02430 PF01171 PP-loop family KHQ82_02430 PF09179 TilS substrate binding domain KHQ82_02430 PF11734 TilS substrate C-terminal domain KHQ82_02435 PF00156 Phosphoribosyl transferase domain KHQ82_02440 PF17862 AAA+ lid domain KHQ82_02440 PF01434 Peptidase family M41 KHQ82_02440 PF06480 FtsH Extracellular KHQ82_02440 PF00004 ATPase family associated with various cellular activities (AAA) KHQ82_02445 PF01479 S4 domain KHQ82_02450 PF07873 YabP family KHQ82_02460 PF01336 OB-fold nucleic acid binding domain KHQ82_02460 PF00152 tRNA synthetases class II (D, K and N) KHQ82_02475 PF02535 ZIP Zinc transporter KHQ82_02480 PF07687 Peptidase dimerisation domain KHQ82_02480 PF01546 Peptidase family M20/M25/M40 KHQ82_02485 PF01116 Fructose-bisphosphate aldolase class-II KHQ82_02490 PF00117 Glutamine amidotransferase class-I KHQ82_02490 PF06418 CTP synthase N-terminus KHQ82_02510 PF02690 Na+/Pi-cotransporter KHQ82_02515 PF13977 BetI-type transcriptional repressor, C-terminal KHQ82_02515 PF00440 Bacterial regulatory proteins, tetR family KHQ82_02520 PF00873 AcrB/AcrD/AcrF family KHQ82_02525 PF01022 Bacterial regulatory protein, arsR family KHQ82_02530 PF00403 Heavy-metal-associated domain KHQ82_02540 PF02132 RecR protein KHQ82_02540 PF13662 Toprim domain KHQ82_02545 PF02575 YbaB/EbfC DNA-binding family KHQ82_02550 PF12169 DNA polymerase III subunits gamma and tau domain III KHQ82_02555 PF01926 50S ribosome-binding GTPase KHQ82_02555 PF12631 MnmE helical domain KHQ82_02555 PF10396 GTP-binding protein TrmE N-terminus KHQ82_02560 PF01171 PP-loop family KHQ82_02580 PF01145 SPFH domain / Band 7 family KHQ82_02610 PF00152 tRNA synthetases class II (D, K and N) KHQ82_02610 PF01336 OB-fold nucleic acid binding domain KHQ82_02615 PF02646 RmuC family KHQ82_02630 PF14849 YidC periplasmic domain KHQ82_02630 PF02096 60Kd inner membrane protein KHQ82_02635 PF00825 Ribonuclease P KHQ82_02640 PF00468 Ribosomal protein L34 KHQ82_02650 PF00308 Bacterial dnaA protein KHQ82_02650 PF08299 Bacterial dnaA protein helix-turn-helix KHQ82_02650 PF11638 DnaA N-terminal domain KHQ82_02655 PF00712 DNA polymerase III beta subunit, N-terminal domain KHQ82_02655 PF02767 DNA polymerase III beta subunit, central domain KHQ82_02655 PF02768 DNA polymerase III beta subunit, C-terminal domain KHQ82_02665 PF02463 RecF/RecN/SMC N terminal domain KHQ82_02670 PF00204 DNA gyrase B KHQ82_02670 PF00986 DNA gyrase B subunit, carboxyl terminus KHQ82_02670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHQ82_02670 PF01751 Toprim domain KHQ82_02675 PF03989 DNA gyrase C-terminal domain, beta-propeller KHQ82_02675 PF00521 DNA gyrase/topoisomerase IV, subunit A KHQ82_02685 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KHQ82_02685 PF02403 Seryl-tRNA synthetase N-terminal domain KHQ82_02690 PF02789 Cytosol aminopeptidase family, N-terminal domain KHQ82_02690 PF00883 Cytosol aminopeptidase family, catalytic domain KHQ82_02695 PF01230 HIT domain KHQ82_02705 PF09671 Spore coat protein (Spore_GerQ) KHQ82_02710 PF07486 Cell Wall Hydrolase KHQ82_02715 PF01515 Phosphate acetyl/butaryl transferase KHQ82_02725 PF00248 Aldo/keto reductase family KHQ82_02730 PF01751 Toprim domain KHQ82_02730 PF13331 Domain of unknown function (DUF4093) KHQ82_02735 PF00398 Ribosomal RNA adenine dimethylase KHQ82_02740 PF00860 Permease family KHQ82_02745 PF05582 YabG peptidase U57 KHQ82_02750 PF08544 GHMP kinases C terminal KHQ82_02750 PF00288 GHMP kinases N terminal domain KHQ82_02755 PF04026 SpoVG KHQ82_02760 PF14572 Phosphoribosyl synthetase-associated domain KHQ82_02760 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KHQ82_02765 PF16326 ABC transporter C-terminal domain KHQ82_02765 PF12848 ABC transporter KHQ82_02765 PF00005 ABC transporter KHQ82_02770 PF01195 Peptidyl-tRNA hydrolase KHQ82_02775 PF17757 UvrB interaction domain KHQ82_02775 PF02559 CarD-like/TRCF domain KHQ82_02775 PF00270 DEAD/DEAH box helicase KHQ82_02775 PF00271 Helicase conserved C-terminal domain KHQ82_02775 PF03461 TRCF domain KHQ82_02780 PF15714 Stage V sporulation protein T C-terminal, transcription factor KHQ82_02780 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KHQ82_02795 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KHQ82_02795 PF00037 4Fe-4S binding domain KHQ82_02795 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KHQ82_02800 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KHQ82_02800 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KHQ82_02800 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHQ82_02810 PF00709 Adenylosuccinate synthetase KHQ82_02815 PF01268 Formate--tetrahydrofolate ligase KHQ82_02915 PF00155 Aminotransferase class I and II KHQ82_02920 PF01678 Diaminopimelate epimerase KHQ82_02925 PF01118 Semialdehyde dehydrogenase, NAD binding domain KHQ82_02925 PF02774 Semialdehyde dehydrogenase, dimerisation domain KHQ82_02930 PF00701 Dihydrodipicolinate synthetase family KHQ82_02935 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal KHQ82_02935 PF00132 Bacterial transferase hexapeptide (six repeats) KHQ82_02935 PF14602 Hexapeptide repeat of succinyl-transferase KHQ82_02940 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KHQ82_02940 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KHQ82_02950 PF02073 Thermophilic metalloprotease (M29) KHQ82_02955 PF01546 Peptidase family M20/M25/M40 KHQ82_02955 PF07687 Peptidase dimerisation domain KHQ82_02960 PF02347 Glycine cleavage system P-protein KHQ82_02965 PF02347 Glycine cleavage system P-protein KHQ82_02970 PF01597 Glycine cleavage H-protein KHQ82_02975 PF01571 Aminomethyltransferase folate-binding domain KHQ82_02975 PF08669 Glycine cleavage T-protein C-terminal barrel domain KHQ82_02980 PF03099 Biotin/lipoate A/B protein ligase family KHQ82_02980 PF10437 Bacterial lipoate protein ligase C-terminus KHQ82_02985 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KHQ82_02985 PF04055 Radical SAM superfamily KHQ82_02990 PF00011 Hsp20/alpha crystallin family KHQ82_03000 PF11799 impB/mucB/samB family C-terminal domain KHQ82_03000 PF00817 impB/mucB/samB family KHQ82_03000 PF11798 IMS family HHH motif KHQ82_03025 PF00464 Serine hydroxymethyltransferase KHQ82_03030 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KHQ82_03030 PF13237 4Fe-4S dicluster domain KHQ82_03030 PF13375 RnfC Barrel sandwich hybrid domain KHQ82_03030 PF10531 SLBB domain KHQ82_03035 PF03116 NQR2, RnfD, RnfE family KHQ82_03045 PF02508 Rnf-Nqr subunit, membrane protein KHQ82_03050 PF02508 Rnf-Nqr subunit, membrane protein KHQ82_03055 PF04060 Putative Fe-S cluster KHQ82_03070 PF03951 Glutamine synthetase, beta-Grasp domain KHQ82_03070 PF00120 Glutamine synthetase, catalytic domain KHQ82_03080 PF05683 Fumarase C-terminus KHQ82_03080 PF05681 Fumarate hydratase (Fumerase) KHQ82_03085 PF05683 Fumarase C-terminus KHQ82_03085 PF05681 Fumarate hydratase (Fumerase) KHQ82_03090 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KHQ82_03095 PF01197 Ribosomal protein L31 KHQ82_03100 PF00265 Thymidine kinase KHQ82_03105 PF14437 MafB19-like deaminase KHQ82_03120 PF00512 His Kinase A (phospho-acceptor) domain KHQ82_03120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHQ82_03120 PF00672 HAMP domain KHQ82_03125 PF00486 Transcriptional regulatory protein, C terminal KHQ82_03125 PF00072 Response regulator receiver domain KHQ82_03130 PF13932 GidA associated domain KHQ82_03130 PF01134 Glucose inhibited division protein A KHQ82_03135 PF02527 rRNA small subunit methyltransferase G KHQ82_03140 PF13614 AAA domain KHQ82_03145 PF02195 ParB-like nuclease domain KHQ82_03145 PF17762 HTH domain found in ParB protein KHQ82_03150 PF06107 Bacterial protein of unknown function (DUF951) KHQ82_03160 PF07690 Major Facilitator Superfamily KHQ82_03165 PF01594 AI-2E family transporter KHQ82_03170 PF00072 Response regulator receiver domain KHQ82_03205 PF01293 Phosphoenolpyruvate carboxykinase KHQ82_03215 PF00664 ABC transporter transmembrane region KHQ82_03215 PF00005 ABC transporter KHQ82_03290 PF00588 SpoU rRNA Methylase family KHQ82_03290 PF08032 RNA 2'-O ribose methyltransferase substrate binding KHQ82_03305 PF00589 Phage integrase family KHQ82_03305 PF02899 Phage integrase, N-terminal SAM-like domain KHQ82_03315 PF01555 DNA methylase KHQ82_03360 PF00293 NUDIX domain KHQ82_03415 PF01844 HNH endonuclease KHQ82_03425 PF00589 Phage integrase family KHQ82_03425 PF02899 Phage integrase, N-terminal SAM-like domain KHQ82_03450 PF05547 Immune inhibitor A peptidase M6 KHQ82_03450 PF00801 PKD domain KHQ82_03455 PF03422 Carbohydrate binding module (family 6) KHQ82_03455 PF00404 Dockerin type I domain KHQ82_03455 PF00756 Putative esterase KHQ82_03455 PF00331 Glycosyl hydrolase family 10 KHQ82_03465 PF01209 ubiE/COQ5 methyltransferase family KHQ82_03520 PF00881 Nitroreductase family KHQ82_03525 PF01381 Helix-turn-helix KHQ82_03535 PF02906 Iron only hydrogenase large subunit, C-terminal domain KHQ82_03535 PF02256 Iron hydrogenase small subunit KHQ82_03535 PF12838 4Fe-4S dicluster domain KHQ82_03545 PF03116 NQR2, RnfD, RnfE family KHQ82_03555 PF02508 Rnf-Nqr subunit, membrane protein KHQ82_03560 PF02508 Rnf-Nqr subunit, membrane protein KHQ82_03565 PF04060 Putative Fe-S cluster KHQ82_03590 PF02769 AIR synthase related protein, C-terminal domain KHQ82_03590 PF00586 AIR synthase related protein, N-terminal domain KHQ82_03595 PF03841 L-seryl-tRNA selenium transferase KHQ82_03595 PF12390 Selenocysteine synthase N terminal KHQ82_03600 PF09106 Elongation factor SelB, winged helix KHQ82_03600 PF09107 Elongation factor SelB, winged helix KHQ82_03600 PF00009 Elongation factor Tu GTP binding domain KHQ82_03600 PF03144 Elongation factor Tu domain 2 KHQ82_03605 PF02906 Iron only hydrogenase large subunit, C-terminal domain KHQ82_03605 PF12838 4Fe-4S dicluster domain KHQ82_03605 PF02256 Iron hydrogenase small subunit KHQ82_03610 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KHQ82_03610 PF00037 4Fe-4S binding domain KHQ82_03610 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KHQ82_03635 PF00338 Ribosomal protein S10p/S20e KHQ82_03640 PF00297 Ribosomal protein L3 KHQ82_03645 PF00573 Ribosomal protein L4/L1 family KHQ82_03650 PF00276 Ribosomal protein L23 KHQ82_03655 PF00181 Ribosomal Proteins L2, RNA binding domain KHQ82_03655 PF03947 Ribosomal Proteins L2, C-terminal domain KHQ82_03660 PF00203 Ribosomal protein S19 KHQ82_03665 PF00237 Ribosomal protein L22p/L17e KHQ82_03670 PF07650 KH domain KHQ82_03670 PF00189 Ribosomal protein S3, C-terminal domain KHQ82_03675 PF00252 Ribosomal protein L16p/L10e KHQ82_03680 PF00831 Ribosomal L29 protein KHQ82_03685 PF00366 Ribosomal protein S17 KHQ82_03690 PF00238 Ribosomal protein L14p/L23e KHQ82_03695 PF00467 KOW motif KHQ82_03695 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KHQ82_03700 PF00281 Ribosomal protein L5 KHQ82_03700 PF00673 ribosomal L5P family C-terminus KHQ82_03705 PF00253 Ribosomal protein S14p/S29e KHQ82_03710 PF00410 Ribosomal protein S8 KHQ82_03715 PF00347 Ribosomal protein L6 KHQ82_03720 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KHQ82_03725 PF00333 Ribosomal protein S5, N-terminal domain KHQ82_03725 PF03719 Ribosomal protein S5, C-terminal domain KHQ82_03730 PF00327 Ribosomal protein L30p/L7e KHQ82_03735 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KHQ82_03740 PF00344 SecY translocase KHQ82_03745 PF05191 Adenylate kinase, active site lid KHQ82_03750 PF00557 Metallopeptidase family M24 KHQ82_03755 PF01176 Translation initiation factor 1A / IF-1 KHQ82_03760 PF00444 Ribosomal protein L36 KHQ82_03765 PF00416 Ribosomal protein S13/S18 KHQ82_03770 PF00411 Ribosomal protein S11 KHQ82_03775 PF01000 RNA polymerase Rpb3/RpoA insert domain KHQ82_03775 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KHQ82_03775 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KHQ82_03780 PF01196 Ribosomal protein L17 KHQ82_03825 PF01712 Deoxynucleoside kinase KHQ82_03835 PF00005 ABC transporter KHQ82_03840 PF00005 ABC transporter KHQ82_03845 PF02361 Cobalt transport protein KHQ82_03850 PF01416 tRNA pseudouridine synthase KHQ82_03855 PF02223 Thymidylate kinase KHQ82_03860 PF09115 DNA polymerase III, delta subunit, C terminal KHQ82_03865 PF04468 PSP1 C-terminal conserved region KHQ82_03870 PF05175 Methyltransferase small domain KHQ82_03880 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KHQ82_03890 PF01588 Putative tRNA binding domain KHQ82_03890 PF09334 tRNA synthetases class I (M) KHQ82_03895 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KHQ82_03895 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KHQ82_03900 PF00731 AIR carboxylase KHQ82_03905 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KHQ82_03905 PF02222 ATP-grasp domain KHQ82_03905 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KHQ82_03910 PF00586 AIR synthase related protein, N-terminal domain KHQ82_03910 PF02769 AIR synthase related protein, C-terminal domain KHQ82_03910 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KHQ82_03915 PF01259 SAICAR synthetase KHQ82_03920 PF00156 Phosphoribosyl transferase domain KHQ82_03925 PF00586 AIR synthase related protein, N-terminal domain KHQ82_03925 PF02769 AIR synthase related protein, C-terminal domain KHQ82_03930 PF00551 Formyl transferase KHQ82_03935 PF01808 AICARFT/IMPCHase bienzyme KHQ82_03935 PF02142 MGS-like domain KHQ82_03940 PF02843 Phosphoribosylglycinamide synthetase, C domain KHQ82_03940 PF02844 Phosphoribosylglycinamide synthetase, N domain KHQ82_03940 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KHQ82_03945 PF00571 CBS domain KHQ82_03945 PF00478 IMP dehydrogenase / GMP reductase domain KHQ82_03950 PF00156 Phosphoribosyl transferase domain KHQ82_03955 PF00117 Glutamine amidotransferase class-I KHQ82_03955 PF00958 GMP synthase C terminal domain KHQ82_03955 PF02540 NAD synthase KHQ82_03960 PF01966 HD domain KHQ82_03965 PF00572 Ribosomal protein L13 KHQ82_03970 PF00380 Ribosomal protein S9/S16 KHQ82_03975 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KHQ82_03975 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KHQ82_03990 PF00749 tRNA synthetases class I (E and Q), catalytic domain KHQ82_04000 PF01406 tRNA synthetases class I (C) catalytic domain KHQ82_04005 PF00636 Ribonuclease III domain KHQ82_04010 PF00588 SpoU rRNA Methylase family KHQ82_04010 PF08032 RNA 2'-O ribose methyltransferase substrate binding KHQ82_04020 PF00471 Ribosomal protein L33 KHQ82_04030 PF00467 KOW motif KHQ82_04030 PF02357 Transcription termination factor nusG KHQ82_04035 PF00293 NUDIX domain KHQ82_04045 PF00298 Ribosomal protein L11, RNA binding domain KHQ82_04045 PF03946 Ribosomal protein L11, N-terminal domain KHQ82_04050 PF00687 Ribosomal protein L1p/L10e family KHQ82_04055 PF00466 Ribosomal protein L10 KHQ82_04060 PF16320 Ribosomal protein L7/L12 dimerisation domain KHQ82_04060 PF00542 Ribosomal protein L7/L12 C-terminal domain KHQ82_04065 PF05175 Methyltransferase small domain KHQ82_04070 PF04563 RNA polymerase beta subunit KHQ82_04070 PF04565 RNA polymerase Rpb2, domain 3 KHQ82_04070 PF04561 RNA polymerase Rpb2, domain 2 KHQ82_04070 PF10385 RNA polymerase beta subunit external 1 domain KHQ82_04070 PF00562 RNA polymerase Rpb2, domain 6 KHQ82_04070 PF04560 RNA polymerase Rpb2, domain 7 KHQ82_04075 PF00623 RNA polymerase Rpb1, domain 2 KHQ82_04075 PF04997 RNA polymerase Rpb1, domain 1 KHQ82_04075 PF04983 RNA polymerase Rpb1, domain 3 KHQ82_04075 PF05000 RNA polymerase Rpb1, domain 4 KHQ82_04075 PF04998 RNA polymerase Rpb1, domain 5 KHQ82_04080 PF00164 Ribosomal protein S12/S23 KHQ82_04085 PF00177 Ribosomal protein S7p/S5e KHQ82_04090 PF00009 Elongation factor Tu GTP binding domain KHQ82_04090 PF14492 Elongation Factor G, domain II KHQ82_04090 PF00679 Elongation factor G C-terminus KHQ82_04090 PF03764 Elongation factor G, domain IV KHQ82_04090 PF03144 Elongation factor Tu domain 2 KHQ82_04095 PF00009 Elongation factor Tu GTP binding domain KHQ82_04095 PF03144 Elongation factor Tu domain 2 KHQ82_04095 PF03143 Elongation factor Tu C-terminal domain KHQ82_04100 PF02464 Competence-damaged protein KHQ82_04100 PF00994 Probable molybdopterin binding domain KHQ82_04100 PF18146 Damage-inducible protein CinA KH domain KHQ82_04105 PF01026 TatD related DNase KHQ82_04110 PF13180 PDZ domain KHQ82_04120 PF00923 Transaldolase/Fructose-6-phosphate aldolase KHQ82_04125 PF00905 Penicillin binding protein transpeptidase domain KHQ82_04125 PF00912 Transglycosylase KHQ82_04130 PF01926 50S ribosome-binding GTPase KHQ82_04130 PF06071 Protein of unknown function (DUF933) KHQ82_04150 PF01250 Ribosomal protein S6 KHQ82_04155 PF00436 Single-strand binding protein family KHQ82_04160 PF01084 Ribosomal protein S18 KHQ82_04165 PF01368 DHH family KHQ82_04165 PF02272 DHHA1 domain KHQ82_04170 PF03948 Ribosomal protein L9, C-terminal domain KHQ82_04170 PF01281 Ribosomal protein L9, N-terminal domain KHQ82_04175 PF00772 DnaB-like helicase N terminal domain KHQ82_04175 PF03796 DnaB-like helicase C terminal domain KHQ82_04185 PF03462 PCRF domain KHQ82_04185 PF00472 RF-1 domain KHQ82_04190 PF13847 Methyltransferase domain KHQ82_04190 PF17827 PrmC N-terminal domain KHQ82_04200 PF03481 Putative GTP-binding controlling metal-binding KHQ82_04200 PF01300 Telomere recombination KHQ82_04215 PF02502 Ribose/Galactose Isomerase KHQ82_04235 PF00119 ATP synthase A chain KHQ82_04240 PF00137 ATP synthase subunit C KHQ82_04245 PF00430 ATP synthase B/B' CF(0) KHQ82_04250 PF00213 ATP synthase delta (OSCP) subunit KHQ82_04255 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KHQ82_04255 PF00306 ATP synthase alpha/beta chain, C terminal domain KHQ82_04255 PF02874 ATP synthase alpha/beta family, beta-barrel domain KHQ82_04260 PF00231 ATP synthase KHQ82_04265 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KHQ82_04265 PF02874 ATP synthase alpha/beta family, beta-barrel domain KHQ82_04270 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KHQ82_04270 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KHQ82_04295 PF08486 Stage II sporulation protein KHQ82_04305 PF12116 Stage III sporulation protein D KHQ82_04310 PF09186 Domain of unknown function (DUF1949) KHQ82_04310 PF01205 Uncharacterized protein family UPF0029 KHQ82_04315 PF02645 Uncharacterised protein, DegV family COG1307 KHQ82_04320 PF01743 Poly A polymerase head domain KHQ82_04320 PF12627 Probable RNA and SrmB- binding site of polymerase A KHQ82_04320 PF13735 tRNA nucleotidyltransferase domain 2 putative KHQ82_04325 PF01966 HD domain KHQ82_04340 PF00753 Metallo-beta-lactamase superfamily KHQ82_04345 PF02590 Predicted SPOUT methyltransferase KHQ82_04350 PF01381 Helix-turn-helix KHQ82_04360 PF13195 Protein of unknown function (DUF4011) KHQ82_04360 PF13086 AAA domain KHQ82_04360 PF13087 AAA domain KHQ82_04375 PF00696 Amino acid kinase family KHQ82_04380 PF00171 Aldehyde dehydrogenase family KHQ82_04385 PF03807 NADP oxidoreductase coenzyme F420-dependent KHQ82_04385 PF14748 Pyrroline-5-carboxylate reductase dimerisation KHQ82_04390 PF00497 Bacterial extracellular solute-binding proteins, family 3 KHQ82_04395 PF00528 Binding-protein-dependent transport system inner membrane component KHQ82_04400 PF00005 ABC transporter KHQ82_04430 PF00005 ABC transporter KHQ82_04430 PF13732 Domain of unknown function (DUF4162) KHQ82_04480 PF12706 Beta-lactamase superfamily domain KHQ82_04480 PF00753 Metallo-beta-lactamase superfamily KHQ82_04485 PF00733 Asparagine synthase KHQ82_04485 PF13537 Glutamine amidotransferase domain KHQ82_04500 PF03144 Elongation factor Tu domain 2 KHQ82_04500 PF00009 Elongation factor Tu GTP binding domain KHQ82_04500 PF00679 Elongation factor G C-terminus KHQ82_04505 PF09383 NIL domain KHQ82_04505 PF00005 ABC transporter KHQ82_04510 PF00528 Binding-protein-dependent transport system inner membrane component KHQ82_04515 PF03180 NLPA lipoprotein KHQ82_04520 PF00005 ABC transporter KHQ82_04535 PF13649 Methyltransferase domain KHQ82_04550 PF01966 HD domain KHQ82_04580 PF01266 FAD dependent oxidoreductase KHQ82_04585 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHQ82_04585 PF04324 BFD-like [2Fe-2S] binding domain KHQ82_04600 PF00474 Sodium:solute symporter family KHQ82_04605 PF09515 Thiamine transporter protein (Thia_YuaJ) KHQ82_04610 PF01131 DNA topoisomerase KHQ82_04610 PF01751 Toprim domain KHQ82_04615 PF00881 Nitroreductase family KHQ82_04620 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KHQ82_04620 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KHQ82_04625 PF09587 Bacterial capsule synthesis protein PGA_cap KHQ82_04645 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KHQ82_04655 PF00005 ABC transporter KHQ82_04655 PF13732 Domain of unknown function (DUF4162) KHQ82_04670 PF01523 Putative modulator of DNA gyrase KHQ82_04695 PF01047 MarR family KHQ82_04700 PF01554 MatE KHQ82_04705 PF00588 SpoU rRNA Methylase family KHQ82_04705 PF08032 RNA 2'-O ribose methyltransferase substrate binding KHQ82_04710 PF02681 Divergent PAP2 family KHQ82_04715 PF01368 DHH family KHQ82_04715 PF02272 DHHA1 domain KHQ82_04720 PF01368 DHH family KHQ82_04720 PF02272 DHHA1 domain KHQ82_04725 PF02153 Prephenate dehydrogenase KHQ82_04730 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KHQ82_04735 PF01761 3-dehydroquinate synthase KHQ82_04740 PF01264 Chorismate synthase KHQ82_04745 PF01842 ACT domain KHQ82_04745 PF01817 Chorismate mutase type II KHQ82_04745 PF00800 Prephenate dehydratase KHQ82_04750 PF01488 Shikimate / quinate 5-dehydrogenase KHQ82_04750 PF08501 Shikimate dehydrogenase substrate binding domain KHQ82_04755 PF01220 Dehydroquinase class II KHQ82_04760 PF18152 DAHP synthase ferredoxin-like domain KHQ82_04760 PF00793 DAHP synthetase I family KHQ82_04765 PF03061 Thioesterase superfamily KHQ82_04775 PF00892 EamA-like transporter family KHQ82_04795 PF00313 'Cold-shock' DNA-binding domain KHQ82_04800 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KHQ82_04800 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KHQ82_04805 PF00156 Phosphoribosyl transferase domain KHQ82_04810 PF01979 Amidohydrolase family KHQ82_04815 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B KHQ82_04820 PF01180 Dihydroorotate dehydrogenase KHQ82_04825 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KHQ82_04830 PF00156 Phosphoribosyl transferase domain KHQ82_04835 PF00072 Response regulator receiver domain KHQ82_04835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHQ82_04840 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KHQ82_04850 PF01709 Transcriptional regulator KHQ82_04880 PF00497 Bacterial extracellular solute-binding proteins, family 3 KHQ82_04885 PF00528 Binding-protein-dependent transport system inner membrane component KHQ82_04890 PF00005 ABC transporter KHQ82_04895 PF10371 Domain of unknown function KHQ82_04895 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II KHQ82_04895 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase KHQ82_04895 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg KHQ82_04895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KHQ82_04895 PF12838 4Fe-4S dicluster domain KHQ82_04900 PF02424 ApbE family KHQ82_04905 PF00005 ABC transporter KHQ82_04910 PF01458 Uncharacterized protein family (UPF0051) KHQ82_04915 PF00266 Aminotransferase class-V KHQ82_04920 PF01592 NifU-like N terminal domain KHQ82_04925 PF01458 Uncharacterized protein family (UPF0051) KHQ82_04930 PF00561 alpha/beta hydrolase fold KHQ82_04930 PF00561 alpha/beta hydrolase fold KHQ82_04935 PF01225 Mur ligase family, catalytic domain KHQ82_04935 PF02875 Mur ligase family, glutamate ligase domain KHQ82_04935 PF08245 Mur ligase middle domain KHQ82_04940 PF07478 D-ala D-ala ligase C-terminus KHQ82_04940 PF01820 D-ala D-ala ligase N-terminus KHQ82_04960 PF00144 Beta-lactamase KHQ82_04970 PF00005 ABC transporter KHQ82_04975 PF00005 ABC transporter KHQ82_05020 PF02463 RecF/RecN/SMC N terminal domain KHQ82_05025 PF03459 TOBE domain KHQ82_05025 PF17912 MalK OB fold domain KHQ82_05025 PF00005 ABC transporter KHQ82_05035 PF00162 Phosphoglycerate kinase KHQ82_05040 PF00121 Triosephosphate isomerase KHQ82_05045 PF00196 Bacterial regulatory proteins, luxR family KHQ82_05065 PF05239 PRC-barrel domain KHQ82_05065 PF01782 RimM N-terminal domain KHQ82_05070 PF01746 tRNA (Guanine-1)-methyltransferase KHQ82_05075 PF01245 Ribosomal protein L19 KHQ82_05080 PF00313 'Cold-shock' DNA-binding domain KHQ82_05085 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus KHQ82_05085 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KHQ82_05090 PF07516 SecA Wing and Scaffold domain KHQ82_05090 PF07517 SecA DEAD-like domain KHQ82_05090 PF02810 SEC-C motif KHQ82_05090 PF01043 SecA preprotein cross-linking domain KHQ82_05095 PF00472 RF-1 domain KHQ82_05095 PF03462 PCRF domain KHQ82_05100 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KHQ82_05100 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KHQ82_05105 PF02631 RecX family KHQ82_05115 PF12822 ECF transporter, substrate-specific component KHQ82_05140 PF17854 FtsK alpha domain KHQ82_05140 PF09397 Ftsk gamma domain KHQ82_05140 PF01580 FtsK/SpoIIIE family KHQ82_05145 PF10502 Signal peptidase, peptidase S26 KHQ82_05150 PF01926 50S ribosome-binding GTPase KHQ82_05155 PF01351 Ribonuclease HII KHQ82_05160 PF01751 Toprim domain KHQ82_05160 PF01131 DNA topoisomerase KHQ82_05160 PF01396 Topoisomerase DNA binding C4 zinc finger KHQ82_05165 PF08245 Mur ligase middle domain KHQ82_05165 PF02875 Mur ligase family, glutamate ligase domain KHQ82_05165 PF01225 Mur ligase family, catalytic domain KHQ82_05170 PF00356 Bacterial regulatory proteins, lacI family KHQ82_05175 PF01479 S4 domain KHQ82_05175 PF00579 tRNA synthetases class I (W and Y) KHQ82_05185 PF01432 Peptidase family M3 KHQ82_05185 PF08439 Oligopeptidase F KHQ82_05190 PF00579 tRNA synthetases class I (W and Y) KHQ82_05200 PF00528 Binding-protein-dependent transport system inner membrane component KHQ82_05205 PF12911 N-terminal TM domain of oligopeptide transport permease C KHQ82_05205 PF00528 Binding-protein-dependent transport system inner membrane component KHQ82_05210 PF00005 ABC transporter KHQ82_05210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KHQ82_05215 PF00005 ABC transporter KHQ82_05215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KHQ82_05225 PF03960 ArsC family KHQ82_05230 PF01513 ATP-NAD kinase KHQ82_05240 PF00574 Clp protease KHQ82_05245 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KHQ82_05245 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KHQ82_05250 PF03167 Uracil DNA glycosylase superfamily KHQ82_05260 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KHQ82_05260 PF01676 Metalloenzyme superfamily KHQ82_05265 PF00113 Enolase, C-terminal TIM barrel domain KHQ82_05265 PF03952 Enolase, N-terminal domain KHQ82_05280 PF00575 S1 RNA binding domain KHQ82_05280 PF17876 Cold shock domain KHQ82_05280 PF08206 Ribonuclease B OB domain KHQ82_05280 PF00773 RNB domain KHQ82_05285 PF01668 SmpB protein KHQ82_05295 PF02899 Phage integrase, N-terminal SAM-like domain KHQ82_05295 PF00589 Phage integrase family KHQ82_05330 PF01555 DNA methylase KHQ82_05410 PF13610 DDE domain KHQ82_05435 PF13276 HTH-like domain KHQ82_05435 PF00665 Integrase core domain KHQ82_05435 PF13333 Integrase core domain KHQ82_05450 PF00144 Beta-lactamase KHQ82_05475 PF02687 FtsX-like permease family KHQ82_05475 PF00005 ABC transporter KHQ82_05475 PF12704 MacB-like periplasmic core domain KHQ82_05485 PF01554 MatE KHQ82_05505 PF00196 Bacterial regulatory proteins, luxR family KHQ82_05505 PF00072 Response regulator receiver domain KHQ82_05515 PF00209 Sodium:neurotransmitter symporter family KHQ82_05520 PF16360 GTP-binding GTPase Middle Region KHQ82_05520 PF13167 GTP-binding GTPase N-terminal KHQ82_05520 PF01926 50S ribosome-binding GTPase KHQ82_05535 PF01966 HD domain KHQ82_05535 PF00072 Response regulator receiver domain KHQ82_05540 PF13411 MerR HTH family regulatory protein KHQ82_05540 PF06445 GyrI-like small molecule binding domain KHQ82_05565 PF00892 EamA-like transporter family KHQ82_05570 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KHQ82_05575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KHQ82_05580 PF00528 Binding-protein-dependent transport system inner membrane component KHQ82_05585 PF12911 N-terminal TM domain of oligopeptide transport permease C KHQ82_05585 PF00528 Binding-protein-dependent transport system inner membrane component KHQ82_05590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KHQ82_05590 PF00005 ABC transporter KHQ82_05595 PF00005 ABC transporter KHQ82_05595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KHQ82_05605 PF00557 Metallopeptidase family M24 KHQ82_05605 PF01321 Creatinase/Prolidase N-terminal domain KHQ82_05620 PF02073 Thermophilic metalloprotease (M29) KHQ82_05625 PF01546 Peptidase family M20/M25/M40 KHQ82_05630 PF00155 Aminotransferase class I and II KHQ82_05635 PF00557 Metallopeptidase family M24 KHQ82_05635 PF01321 Creatinase/Prolidase N-terminal domain KHQ82_05640 PF00557 Metallopeptidase family M24 KHQ82_05640 PF01321 Creatinase/Prolidase N-terminal domain KHQ82_05645 PF01042 Endoribonuclease L-PSP KHQ82_05655 PF00155 Aminotransferase class I and II KHQ82_05665 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KHQ82_05670 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KHQ82_05675 PF03611 PTS system sugar-specific permease component KHQ82_05680 PF13580 SIS domain KHQ82_05685 PF01979 Amidohydrolase family KHQ82_05690 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KHQ82_05695 PF00381 PTS HPr component phosphorylation site KHQ82_05700 PF02896 PEP-utilising enzyme, TIM barrel domain KHQ82_05700 PF00391 PEP-utilising enzyme, mobile domain KHQ82_05700 PF05524 PEP-utilising enzyme, N-terminal KHQ82_05720 PF05893 Acyl-CoA reductase (LuxC) KHQ82_05740 PF02734 DAK2 domain KHQ82_05745 PF02733 Dak1 domain KHQ82_05750 PF00005 ABC transporter KHQ82_05755 PF02653 Branched-chain amino acid transport system / permease component KHQ82_05760 PF02653 Branched-chain amino acid transport system / permease component KHQ82_05765 PF05343 M42 glutamyl aminopeptidase KHQ82_05770 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KHQ82_05770 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KHQ82_05775 PF03437 BtpA family KHQ82_05785 PF00356 Bacterial regulatory proteins, lacI family KHQ82_05790 PF01212 Beta-eliminating lyase KHQ82_05795 PF13419 Haloacid dehalogenase-like hydrolase KHQ82_05800 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KHQ82_05800 PF01872 RibD C-terminal domain KHQ82_05805 PF00677 Lumazine binding domain KHQ82_05810 PF00925 GTP cyclohydrolase II KHQ82_05810 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KHQ82_05815 PF00885 6,7-dimethyl-8-ribityllumazine synthase KHQ82_05820 PF00196 Bacterial regulatory proteins, luxR family KHQ82_05820 PF00072 Response regulator receiver domain KHQ82_05840 PF00106 short chain dehydrogenase KHQ82_05870 PF00625 Guanylate kinase KHQ82_05905 PF10609 NUBPL iron-transfer P-loop NTPase KHQ82_05925 PF10609 NUBPL iron-transfer P-loop NTPase KHQ82_05930 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KHQ82_05940 PF02735 Ku70/Ku80 beta-barrel domain KHQ82_05945 PF01068 ATP dependent DNA ligase domain KHQ82_05945 PF13298 DNA polymerase Ligase (LigD) KHQ82_05945 PF04679 ATP dependent DNA ligase C terminal region KHQ82_05960 PF00392 Bacterial regulatory proteins, gntR family KHQ82_05960 PF00155 Aminotransferase class I and II KHQ82_05980 PF01799 [2Fe-2S] binding domain KHQ82_05980 PF00111 2Fe-2S iron-sulfur cluster binding domain KHQ82_05985 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KHQ82_05985 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KHQ82_05995 PF00005 ABC transporter KHQ82_05995 PF00664 ABC transporter transmembrane region KHQ82_06000 PF00664 ABC transporter transmembrane region KHQ82_06000 PF00005 ABC transporter KHQ82_06010 PF02909 Tetracyclin repressor-like, C-terminal domain KHQ82_06010 PF00440 Bacterial regulatory proteins, tetR family KHQ82_06020 PF01554 MatE KHQ82_06030 PF01470 Pyroglutamyl peptidase KHQ82_06035 PF03951 Glutamine synthetase, beta-Grasp domain KHQ82_06035 PF00120 Glutamine synthetase, catalytic domain KHQ82_06040 PF06874 Firmicute fructose-1,6-bisphosphatase KHQ82_06045 PF00291 Pyridoxal-phosphate dependent enzyme KHQ82_06050 PF00271 Helicase conserved C-terminal domain KHQ82_06050 PF00270 DEAD/DEAH box helicase KHQ82_06065 PF01734 Patatin-like phospholipase KHQ82_06085 PF01551 Peptidase family M23 KHQ82_06105 PF00037 4Fe-4S binding domain KHQ82_06105 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KHQ82_06105 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KHQ82_06110 PF02256 Iron hydrogenase small subunit KHQ82_06110 PF02906 Iron only hydrogenase large subunit, C-terminal domain KHQ82_06110 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KHQ82_06110 PF00037 4Fe-4S binding domain KHQ82_06120 PF01546 Peptidase family M20/M25/M40 KHQ82_06125 PF12833 Helix-turn-helix domain KHQ82_06155 PF12791 Anti-sigma factor N-terminus KHQ82_06160 PF00704 Glycosyl hydrolases family 18 KHQ82_06160 PF01476 LysM domain KHQ82_06170 PF00072 Response regulator receiver domain KHQ82_06170 PF01966 HD domain KHQ82_06215 PF12368 Rhodanase C-terminal KHQ82_06215 PF00581 Rhodanese-like domain KHQ82_06215 PF17773 UPF0176 acylphosphatase like domain KHQ82_06225 PF11490 DNA polymerase III polC-type N-terminus II KHQ82_06225 PF07733 Bacterial DNA polymerase III alpha NTPase domain KHQ82_06225 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KHQ82_06225 PF14579 Helix-hairpin-helix motif KHQ82_06225 PF02811 PHP domain KHQ82_06225 PF00929 Exonuclease KHQ82_06225 PF14480 DNA polymerase III polC-type N-terminus I KHQ82_06240 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KHQ82_06240 PF01409 tRNA synthetases class II core domain (F) KHQ82_06245 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KHQ82_06245 PF03147 Ferredoxin-fold anticodon binding domain KHQ82_06245 PF03484 tRNA synthetase B5 domain KHQ82_06245 PF03483 B3/4 domain KHQ82_06245 PF01588 Putative tRNA binding domain KHQ82_06255 PF01029 NusB family KHQ82_06255 PF01189 16S rRNA methyltransferase RsmB/F KHQ82_06260 PF04055 Radical SAM superfamily KHQ82_06265 PF03193 RsgA GTPase KHQ82_06265 PF16745 RsgA N-terminal domain KHQ82_06270 PF00834 Ribulose-phosphate 3 epimerase family KHQ82_06280 PF00830 Ribosomal L28 family KHQ82_06285 PF13684 Dihydroxyacetone kinase family KHQ82_06285 PF02734 DAK2 domain KHQ82_06300 PF03323 Bacillus/Clostridium GerA spore germination protein KHQ82_06330 PF00270 DEAD/DEAH box helicase KHQ82_06330 PF00271 Helicase conserved C-terminal domain KHQ82_06330 PF17191 RecG wedge domain KHQ82_06335 PF02504 Fatty acid synthesis protein KHQ82_06340 PF14622 Ribonuclease-III-like KHQ82_06340 PF00035 Double-stranded RNA binding motif KHQ82_06345 PF05173 Dihydrodipicolinate reductase, C-terminus KHQ82_06345 PF01113 Dihydrodipicolinate reductase, N-terminus KHQ82_06355 PF00633 Helix-hairpin-helix motif KHQ82_06355 PF00730 HhH-GPD superfamily base excision DNA repair protein KHQ82_06355 PF10576 Iron-sulfur binding domain of endonuclease III KHQ82_06360 PF10957 Sporulation protein Cse60 KHQ82_06380 PF05636 HIGH Nucleotidyl Transferase KHQ82_06390 PF01783 Ribosomal L32p protein family KHQ82_06395 PF01795 MraW methylase family KHQ82_06400 PF03793 PASTA domain KHQ82_06400 PF03717 Penicillin-binding Protein dimerisation domain KHQ82_06400 PF00905 Penicillin binding protein transpeptidase domain KHQ82_06405 PF01225 Mur ligase family, catalytic domain KHQ82_06405 PF02875 Mur ligase family, glutamate ligase domain KHQ82_06405 PF08245 Mur ligase middle domain KHQ82_06410 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 KHQ82_06410 PF00953 Glycosyl transferase family 4 KHQ82_06415 PF02875 Mur ligase family, glutamate ligase domain KHQ82_06415 PF08245 Mur ligase middle domain KHQ82_06420 PF01467 Cytidylyltransferase-like KHQ82_06425 PF00795 Carbon-nitrogen hydrolase KHQ82_06425 PF02540 NAD synthase KHQ82_06435 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KHQ82_06440 PF14490 Helix-hairpin-helix containing domain KHQ82_06440 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain KHQ82_06440 PF13538 UvrD-like helicase C-terminal domain KHQ82_06450 PF01594 AI-2E family transporter KHQ82_06455 PF01594 AI-2E family transporter KHQ82_06460 PF02272 DHHA1 domain KHQ82_06460 PF01411 tRNA synthetases class II (A) KHQ82_06460 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KHQ82_06465 PF03652 Holliday junction resolvase KHQ82_06470 PF06949 Protein of unknown function (DUF1292) KHQ82_06475 PF01596 O-methyltransferase KHQ82_06480 PF01136 Peptidase family U32 KHQ82_06485 PF16325 Peptidase family U32 C-terminal domain KHQ82_06485 PF01136 Peptidase family U32 KHQ82_06490 PF00485 Phosphoribulokinase / Uridine kinase family KHQ82_06495 PF01272 Transcription elongation factor, GreA/GreB, C-term KHQ82_06495 PF03449 Transcription elongation factor, N-terminal KHQ82_06500 PF04542 Sigma-70 region 2 KHQ82_06500 PF04545 Sigma-70, region 4 KHQ82_06510 PF01926 50S ribosome-binding GTPase KHQ82_06525 PF13649 Methyltransferase domain KHQ82_06535 PF03772 Competence protein KHQ82_06535 PF13567 Domain of unknown function (DUF4131) KHQ82_06535 PF00753 Metallo-beta-lactamase superfamily KHQ82_06545 PF01649 Ribosomal protein S20 KHQ82_06550 PF03418 Germination protease KHQ82_06560 PF01066 CDP-alcohol phosphatidyltransferase KHQ82_06565 PF00154 recA bacterial DNA recombination protein KHQ82_06570 PF12072 Domain of unknown function (DUF3552) KHQ82_06570 PF01966 HD domain KHQ82_06570 PF00013 KH domain KHQ82_06575 PF13277 YmdB-like protein KHQ82_06580 PF04232 Stage V sporulation protein S (SpoVS) KHQ82_06590 PF04055 Radical SAM superfamily KHQ82_06590 PF01938 TRAM domain KHQ82_06590 PF00919 Uncharacterized protein family UPF0004 KHQ82_06595 PF10628 Outer spore coat protein E (CotE) KHQ82_06600 PF02632 BioY family KHQ82_06605 PF00528 Binding-protein-dependent transport system inner membrane component KHQ82_06610 PF00528 Binding-protein-dependent transport system inner membrane component KHQ82_06610 PF12911 N-terminal TM domain of oligopeptide transport permease C KHQ82_06615 PF00005 ABC transporter KHQ82_06615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KHQ82_06620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KHQ82_06620 PF00005 ABC transporter KHQ82_06625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KHQ82_06645 PF07499 RuvA, C-terminal domain KHQ82_06645 PF01330 RuvA N terminal domain KHQ82_06650 PF17864 RuvB AAA lid domain KHQ82_06650 PF05496 Holliday junction DNA helicase RuvB P-loop domain KHQ82_06650 PF05491 RuvB C-terminal winged helix domain KHQ82_06655 PF02547 Queuosine biosynthesis protein KHQ82_06660 PF03313 Serine dehydratase alpha chain KHQ82_06660 PF03315 Serine dehydratase beta chain KHQ82_06665 PF01702 Queuine tRNA-ribosyltransferase KHQ82_06670 PF01098 Cell cycle protein KHQ82_06675 PF04101 Glycosyltransferase family 28 C-terminal domain KHQ82_06675 PF03033 Glycosyltransferase family 28 N-terminal domain KHQ82_06680 PF01565 FAD binding domain KHQ82_06680 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KHQ82_06690 PF12327 FtsZ family, C-terminal domain KHQ82_06690 PF00091 Tubulin/FtsZ family, GTPase domain KHQ82_06700 PF04542 Sigma-70 region 2 KHQ82_06700 PF04545 Sigma-70, region 4 KHQ82_06705 PF04539 Sigma-70 region 3 KHQ82_06705 PF04545 Sigma-70, region 4 KHQ82_06705 PF04542 Sigma-70 region 2 KHQ82_06710 PF05239 PRC-barrel domain KHQ82_06715 PF01168 Alanine racemase, N-terminal domain KHQ82_06720 PF04472 Cell division protein SepF KHQ82_06725 PF02325 YGGT family KHQ82_06735 PF00133 tRNA synthetases class I (I, L, M and V) KHQ82_06735 PF08264 Anticodon-binding domain of tRNA KHQ82_06735 PF06827 Zinc finger found in FPG and IleRS KHQ82_06740 PF00391 PEP-utilising enzyme, mobile domain KHQ82_06740 PF02896 PEP-utilising enzyme, TIM barrel domain KHQ82_06740 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KHQ82_06745 PF01554 MatE KHQ82_06755 PF08331 Domain of unknown function (DUF1730) KHQ82_06760 PF00588 SpoU rRNA Methylase family KHQ82_06790 PF04167 Protein of unknown function (DUF402) KHQ82_06810 PF01321 Creatinase/Prolidase N-terminal domain KHQ82_06810 PF00557 Metallopeptidase family M24 KHQ82_06815 PF00072 Response regulator receiver domain KHQ82_06815 PF00512 His Kinase A (phospho-acceptor) domain KHQ82_06815 PF09308 LuxQ, periplasmic KHQ82_06815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHQ82_06830 PF01734 Patatin-like phospholipase KHQ82_06835 PF12652 CotJB protein KHQ82_06840 PF05067 Manganese containing catalase KHQ82_06865 PF00571 CBS domain KHQ82_06865 PF01769 Divalent cation transporter KHQ82_06865 PF03448 MgtE intracellular N domain KHQ82_06885 PF02779 Transketolase, pyrimidine binding domain KHQ82_06885 PF02780 Transketolase, C-terminal domain KHQ82_06885 PF00456 Transketolase, thiamine diphosphate binding domain KHQ82_06915 PF14098 Small, acid-soluble spore protein I KHQ82_06920 PF02390 Putative methyltransferase KHQ82_06925 PF05343 M42 glutamyl aminopeptidase KHQ82_06930 PF00550 Phosphopantetheine attachment site KHQ82_06935 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KHQ82_06935 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KHQ82_06935 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KHQ82_06935 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KHQ82_06940 PF05195 Aminopeptidase P, N-terminal domain KHQ82_06940 PF00557 Metallopeptidase family M24 KHQ82_06960 PF00005 ABC transporter KHQ82_06970 PF00707 Translation initiation factor IF-3, C-terminal domain KHQ82_06970 PF05198 Translation initiation factor IF-3, N-terminal domain KHQ82_06975 PF01632 Ribosomal protein L35 KHQ82_06980 PF00453 Ribosomal protein L20 KHQ82_06985 PF00924 Mechanosensitive ion channel KHQ82_06995 PF03485 Arginyl tRNA synthetase N terminal domain KHQ82_06995 PF05746 DALR anticodon binding domain KHQ82_06995 PF00750 tRNA synthetases class I (R) KHQ82_07000 PF05343 M42 glutamyl aminopeptidase KHQ82_07010 PF01467 Cytidylyltransferase-like KHQ82_07025 PF17910 FeoB cytosolic helical domain KHQ82_07025 PF02421 Ferrous iron transport protein B KHQ82_07025 PF07670 Nucleoside recognition KHQ82_07025 PF07664 Ferrous iron transport protein B C terminus KHQ82_07030 PF05257 CHAP domain KHQ82_07030 PF01476 LysM domain KHQ82_07035 PF00990 Diguanylate cyclase, GGDEF domain KHQ82_07035 PF00072 Response regulator receiver domain KHQ82_07055 PF14537 Cytochrome c3 KHQ82_07055 PF00890 FAD binding domain KHQ82_07060 PF00072 Response regulator receiver domain KHQ82_07065 PF17203 Single cache domain 3 KHQ82_07065 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KHQ82_07065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHQ82_07065 PF00989 PAS fold KHQ82_07070 PF00072 Response regulator receiver domain KHQ82_07095 PF13333 Integrase core domain KHQ82_07095 PF00665 Integrase core domain KHQ82_07095 PF13276 HTH-like domain KHQ82_07105 PF02702 Osmosensitive K+ channel His kinase sensor domain KHQ82_07105 PF00512 His Kinase A (phospho-acceptor) domain KHQ82_07105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHQ82_07105 PF13493 Domain of unknown function (DUF4118) KHQ82_07110 PF00072 Response regulator receiver domain KHQ82_07110 PF00486 Transcriptional regulatory protein, C terminal KHQ82_07115 PF02687 FtsX-like permease family KHQ82_07115 PF12704 MacB-like periplasmic core domain KHQ82_07120 PF00005 ABC transporter KHQ82_07145 PF00583 Acetyltransferase (GNAT) family KHQ82_07155 PF00072 Response regulator receiver domain KHQ82_07155 PF00486 Transcriptional regulatory protein, C terminal KHQ82_07160 PF00005 ABC transporter KHQ82_07170 PF00512 His Kinase A (phospho-acceptor) domain KHQ82_07170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHQ82_07240 PF00440 Bacterial regulatory proteins, tetR family KHQ82_07345 PF01555 DNA methylase KHQ82_07355 PF00589 Phage integrase family KHQ82_07355 PF02899 Phage integrase, N-terminal SAM-like domain KHQ82_07365 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHQ82_07365 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KHQ82_07375 PF00403 Heavy-metal-associated domain KHQ82_07380 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KHQ82_07380 PF05698 Bacterial trigger factor protein (TF) C-terminus KHQ82_07380 PF05697 Bacterial trigger factor protein (TF) KHQ82_07385 PF06689 ClpX C4-type zinc finger KHQ82_07385 PF10431 C-terminal, D2-small domain, of ClpB protein KHQ82_07385 PF07724 AAA domain (Cdc48 subfamily) KHQ82_07390 PF00004 ATPase family associated with various cellular activities (AAA) KHQ82_07390 PF05362 Lon protease (S16) C-terminal proteolytic domain KHQ82_07390 PF02190 ATP-dependent protease La (LON) substrate-binding domain KHQ82_07395 PF01926 50S ribosome-binding GTPase KHQ82_07415 PF10458 Valyl tRNA synthetase tRNA binding arm KHQ82_07415 PF08264 Anticodon-binding domain of tRNA KHQ82_07415 PF00133 tRNA synthetases class I (I, L, M and V) KHQ82_07420 PF03144 Elongation factor Tu domain 2 KHQ82_07420 PF00009 Elongation factor Tu GTP binding domain KHQ82_07420 PF03764 Elongation factor G, domain IV KHQ82_07420 PF14492 Elongation Factor G, domain II KHQ82_07420 PF00679 Elongation factor G C-terminus KHQ82_07425 PF02645 Uncharacterised protein, DegV family COG1307 KHQ82_07430 PF02675 S-adenosylmethionine decarboxylase KHQ82_07435 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KHQ82_07435 PF01276 Orn/Lys/Arg decarboxylase, major domain KHQ82_07440 PF17284 Spermidine synthase tetramerisation domain KHQ82_07445 PF00491 Arginase family KHQ82_07450 PF00106 short chain dehydrogenase KHQ82_07455 PF00155 Aminotransferase class I and II KHQ82_07470 PF02645 Uncharacterised protein, DegV family COG1307 KHQ82_07475 PF02875 Mur ligase family, glutamate ligase domain KHQ82_07475 PF08245 Mur ligase middle domain KHQ82_07485 PF04002 RadC-like JAB domain KHQ82_07495 PF02163 Peptidase family M50 KHQ82_07500 PF00829 Ribosomal prokaryotic L21 protein KHQ82_07510 PF01016 Ribosomal L27 protein KHQ82_07525 PF01926 50S ribosome-binding GTPase KHQ82_07525 PF01018 GTP1/OBG KHQ82_07525 PF09269 Domain of unknown function (DUF1967) KHQ82_07530 PF03309 Type III pantothenate kinase KHQ82_07535 PF05192 MutS domain III KHQ82_07535 PF05190 MutS family domain IV KHQ82_07535 PF00488 MutS domain V KHQ82_07535 PF05188 MutS domain II KHQ82_07535 PF01624 MutS domain I KHQ82_07540 PF01119 DNA mismatch repair protein, C-terminal domain KHQ82_07540 PF08676 MutL C terminal dimerisation domain KHQ82_07550 PF09285 Elongation factor P, C-terminal KHQ82_07550 PF01132 Elongation factor P (EF-P) OB domain KHQ82_07550 PF08207 Elongation factor P (EF-P) KOW-like domain KHQ82_07555 PF01906 Putative heavy-metal-binding KHQ82_07560 PF00571 CBS domain KHQ82_07560 PF03471 Transporter associated domain KHQ82_07560 PF01595 Cyclin M transmembrane N-terminal domain KHQ82_07565 PF09515 Thiamine transporter protein (Thia_YuaJ) KHQ82_07570 PF00912 Transglycosylase KHQ82_07570 PF00905 Penicillin binding protein transpeptidase domain KHQ82_07575 PF03838 Recombination protein U KHQ82_07580 PF01522 Polysaccharide deacetylase KHQ82_07590 PF00696 Amino acid kinase family KHQ82_07590 PF13840 ACT domain KHQ82_07595 PF17770 Ribonuclease J C-terminal domain KHQ82_07595 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KHQ82_07595 PF00753 Metallo-beta-lactamase superfamily KHQ82_07610 PF02608 ABC transporter substrate-binding protein PnrA-like KHQ82_07615 PF00005 ABC transporter KHQ82_07620 PF02653 Branched-chain amino acid transport system / permease component KHQ82_07625 PF02653 Branched-chain amino acid transport system / permease component KHQ82_07630 PF01212 Beta-eliminating lyase KHQ82_07635 PF16193 AAA C-terminal domain KHQ82_07635 PF05496 Holliday junction DNA helicase RuvB P-loop domain KHQ82_07635 PF12002 MgsA AAA+ ATPase C terminal KHQ82_07645 PF02080 TrkA-C domain KHQ82_07645 PF02254 TrkA-N domain KHQ82_07655 PF01138 3' exoribonuclease family, domain 1 KHQ82_07655 PF03725 3' exoribonuclease family, domain 2 KHQ82_07660 PF01725 Ham1 family KHQ82_07665 PF12850 Calcineurin-like phosphoesterase superfamily domain KHQ82_07680 PF01625 Peptide methionine sulfoxide reductase KHQ82_07690 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KHQ82_07695 PF13180 PDZ domain KHQ82_07695 PF05362 Lon protease (S16) C-terminal proteolytic domain KHQ82_07705 PF01252 Signal peptidase (SPase) II KHQ82_07710 PF00849 RNA pseudouridylate synthase KHQ82_07710 PF01479 S4 domain KHQ82_07715 PF00210 Ferritin-like domain KHQ82_07720 PF11858 Domain of unknown function (DUF3378) KHQ82_07720 PF01351 Ribonuclease HII KHQ82_07725 PF00488 MutS domain V KHQ82_07725 PF01713 Smr domain KHQ82_07730 PF00085 Thioredoxin KHQ82_07735 PF16198 tRNA pseudouridylate synthase B C-terminal domain KHQ82_07735 PF01509 TruB family pseudouridylate synthase (N terminal domain) KHQ82_07740 PF06574 FAD synthetase KHQ82_07740 PF01687 Riboflavin kinase KHQ82_07745 PF00312 Ribosomal protein S15 KHQ82_07750 PF00013 KH domain KHQ82_07750 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KHQ82_07750 PF01138 3' exoribonuclease family, domain 1 KHQ82_07750 PF03725 3' exoribonuclease family, domain 2 KHQ82_07750 PF00575 S1 RNA binding domain KHQ82_07755 PF04324 BFD-like [2Fe-2S] binding domain KHQ82_07755 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KHQ82_07755 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KHQ82_07755 PF18267 Rubredoxin NAD+ reductase C-terminal domain KHQ82_07755 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHQ82_07760 PF00390 Malic enzyme, N-terminal domain KHQ82_07760 PF03949 Malic enzyme, NAD binding domain KHQ82_07770 PF00679 Elongation factor G C-terminus KHQ82_07770 PF00009 Elongation factor Tu GTP binding domain KHQ82_07770 PF03144 Elongation factor Tu domain 2 KHQ82_07770 PF06421 GTP-binding protein LepA C-terminus KHQ82_07775 PF04055 Radical SAM superfamily KHQ82_07775 PF06969 HemN C-terminal domain KHQ82_07785 PF00589 Phage integrase family KHQ82_07785 PF02899 Phage integrase, N-terminal SAM-like domain KHQ82_07790 PF01676 Metalloenzyme superfamily KHQ82_07800 PF04229 GrpB protein KHQ82_07800 PF13673 Acetyltransferase (GNAT) domain KHQ82_07810 PF02811 PHP domain KHQ82_07820 PF03989 DNA gyrase C-terminal domain, beta-propeller KHQ82_07820 PF00521 DNA gyrase/topoisomerase IV, subunit A KHQ82_07825 PF00204 DNA gyrase B KHQ82_07825 PF00986 DNA gyrase B subunit, carboxyl terminus KHQ82_07825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHQ82_07825 PF01751 Toprim domain KHQ82_07830 PF02660 Glycerol-3-phosphate acyltransferase KHQ82_07835 PF03672 Uncharacterised protein family (UPF0154) KHQ82_07840 PF00037 4Fe-4S binding domain KHQ82_07845 PF00027 Cyclic nucleotide-binding domain KHQ82_07845 PF13545 Crp-like helix-turn-helix domain KHQ82_07855 PF00005 ABC transporter KHQ82_07860 PF02492 CobW/HypB/UreG, nucleotide-binding domain KHQ82_07870 PF01521 Iron-sulphur cluster biosynthesis KHQ82_07870 PF01106 NifU-like domain KHQ82_07885 PF01979 Amidohydrolase family KHQ82_07890 PF08000 Bacterial PH domain KHQ82_07900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHQ82_07900 PF00512 His Kinase A (phospho-acceptor) domain KHQ82_07900 PF00672 HAMP domain KHQ82_07905 PF00486 Transcriptional regulatory protein, C terminal KHQ82_07905 PF00072 Response regulator receiver domain KHQ82_07910 PF12704 MacB-like periplasmic core domain KHQ82_07910 PF02687 FtsX-like permease family KHQ82_07915 PF00005 ABC transporter KHQ82_07920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KHQ82_07935 PF17853 GGDEF-like domain KHQ82_07935 PF13556 PucR C-terminal helix-turn-helix domain KHQ82_07935 PF05651 Putative sugar diacid recognition KHQ82_07950 PF00324 Amino acid permease KHQ82_07960 PF08546 Ketopantoate reductase PanE/ApbA C terminal KHQ82_07960 PF02558 Ketopantoate reductase PanE/ApbA KHQ82_07965 PF00144 Beta-lactamase KHQ82_07975 PF02504 Fatty acid synthesis protein KHQ82_07980 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KHQ82_07995 PF09338 Glycine/sarcosine/betaine reductase component B subunits KHQ82_08000 PF00085 Thioredoxin KHQ82_08005 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHQ82_08020 PF00140 Sigma-70 factor, region 1.2 KHQ82_08020 PF04542 Sigma-70 region 2 KHQ82_08020 PF04539 Sigma-70 region 3 KHQ82_08020 PF04545 Sigma-70, region 4 KHQ82_08020 PF03979 Sigma-70 factor, region 1.1 KHQ82_08025 PF10410 DnaB-helicase binding domain of primase KHQ82_08025 PF01807 CHC2 zinc finger KHQ82_08025 PF08275 DNA primase catalytic core, N-terminal domain KHQ82_08030 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KHQ82_08030 PF03129 Anticodon binding domain KHQ82_08040 PF01925 Sulfite exporter TauE/SafE KHQ82_08045 PF02565 Recombination protein O C terminal KHQ82_08045 PF11967 Recombination protein O N terminal KHQ82_08050 PF07650 KH domain KHQ82_08050 PF01926 50S ribosome-binding GTPase KHQ82_08055 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KHQ82_08060 PF02130 Uncharacterized protein family UPF0054 KHQ82_08065 PF02562 PhoH-like protein KHQ82_08075 PF01165 Ribosomal protein S21 KHQ82_08085 PF04055 Radical SAM superfamily KHQ82_08085 PF01938 TRAM domain KHQ82_08085 PF00919 Uncharacterized protein family UPF0004 KHQ82_08090 PF01979 Amidohydrolase family KHQ82_08095 PF00226 DnaJ domain KHQ82_08095 PF01556 DnaJ C terminal domain KHQ82_08095 PF00684 DnaJ central domain KHQ82_08100 PF00012 Hsp70 protein KHQ82_08105 PF01025 GrpE KHQ82_08110 PF01628 HrcA protein C terminal domain KHQ82_08115 PF00753 Metallo-beta-lactamase superfamily KHQ82_08120 PF00471 Ribosomal protein L33 KHQ82_08125 PF04551 GcpE protein KHQ82_08145 PF06750 Bacterial Peptidase A24 N-terminal domain KHQ82_08145 PF01478 Type IV leader peptidase family KHQ82_08150 PF00114 Pilin (bacterial filament) KHQ82_08150 PF07963 Prokaryotic N-terminal methylation motif KHQ82_08155 PF00482 Type II secretion system (T2SS), protein F KHQ82_08160 PF00437 Type II/IV secretion system protein KHQ82_08160 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KHQ82_08185 PF01261 Xylose isomerase-like TIM barrel KHQ82_08190 PF00270 DEAD/DEAH box helicase KHQ82_08190 PF00271 Helicase conserved C-terminal domain KHQ82_08195 PF02401 LytB protein KHQ82_08205 PF00072 Response regulator receiver domain KHQ82_08205 PF08769 Sporulation initiation factor Spo0A C terminal KHQ82_08210 PF05580 SpoIVB peptidase S55 KHQ82_08210 PF17820 PDZ domain KHQ82_08215 PF02463 RecF/RecN/SMC N terminal domain KHQ82_08220 PF01479 S4 domain KHQ82_08220 PF01728 FtsJ-like methyltransferase KHQ82_08225 PF02779 Transketolase, pyrimidine binding domain KHQ82_08225 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KHQ82_08225 PF02780 Transketolase, C-terminal domain KHQ82_08230 PF02609 Exonuclease VII small subunit KHQ82_08235 PF02601 Exonuclease VII, large subunit KHQ82_08235 PF13742 OB-fold nucleic acid binding domain KHQ82_08240 PF01029 NusB family KHQ82_08250 PF00899 ThiF family KHQ82_08255 PF02938 GAD domain KHQ82_08255 PF00152 tRNA synthetases class II (D, K and N) KHQ82_08255 PF01336 OB-fold nucleic acid binding domain KHQ82_08260 PF03129 Anticodon binding domain KHQ82_08260 PF13393 Histidyl-tRNA synthetase KHQ82_08270 PF02580 D-Tyr-tRNA(Tyr) deacylase KHQ82_08275 PF02824 TGS domain KHQ82_08275 PF13291 ACT domain KHQ82_08275 PF04607 Region found in RelA / SpoT proteins KHQ82_08280 PF00156 Phosphoribosyl transferase domain KHQ82_08285 PF14667 Polysaccharide biosynthesis C-terminal domain KHQ82_08285 PF01943 Polysaccharide biosynthesis protein KHQ82_08290 PF04239 Protein of unknown function (DUF421) KHQ82_08300 PF00216 Bacterial DNA-binding protein KHQ82_08305 PF09547 Stage IV sporulation protein A (spore_IV_A) KHQ82_08315 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KHQ82_08315 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KHQ82_08320 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KHQ82_08320 PF01926 50S ribosome-binding GTPase KHQ82_08325 PF00575 S1 RNA binding domain KHQ82_08330 PF02224 Cytidylate kinase KHQ82_08335 PF03030 Inorganic H+ pyrophosphatase KHQ82_08340 PF00849 RNA pseudouridylate synthase KHQ82_08340 PF01479 S4 domain KHQ82_08345 PF07670 Nucleoside recognition KHQ82_08350 PF07670 Nucleoside recognition KHQ82_08355 PF07943 Penicillin-binding protein 5, C-terminal domain KHQ82_08355 PF00768 D-alanyl-D-alanine carboxypeptidase KHQ82_08360 PF03323 Bacillus/Clostridium GerA spore germination protein KHQ82_08365 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KHQ82_08370 PF07451 Stage V sporulation protein AD (SpoVAD) KHQ82_08375 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KHQ82_08385 PF13581 Histidine kinase-like ATPase domain KHQ82_08390 PF01740 STAS domain KHQ82_08395 PF00583 Acetyltransferase (GNAT) family KHQ82_08415 PF07943 Penicillin-binding protein 5, C-terminal domain KHQ82_08415 PF00768 D-alanyl-D-alanine carboxypeptidase KHQ82_08420 PF02885 Glycosyl transferase family, helical bundle domain KHQ82_08420 PF00591 Glycosyl transferase family, a/b domain KHQ82_08420 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KHQ82_08430 PF00186 Dihydrofolate reductase KHQ82_08435 PF00303 Thymidylate synthase KHQ82_08440 PF00436 Single-strand binding protein family KHQ82_08445 PF00675 Insulinase (Peptidase family M16) KHQ82_08445 PF05193 Peptidase M16 inactive domain KHQ82_08455 PF01048 Phosphorylase superfamily KHQ82_08470 PF01325 Iron dependent repressor, N-terminal DNA binding domain KHQ82_08470 PF02742 Iron dependent repressor, metal binding and dimerisation domain KHQ82_08475 PF00849 RNA pseudouridylate synthase KHQ82_08475 PF01479 S4 domain KHQ82_08490 PF12838 4Fe-4S dicluster domain KHQ82_08490 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KHQ82_08490 PF00384 Molybdopterin oxidoreductase KHQ82_08490 PF01568 Molydopterin dinucleotide binding domain KHQ82_08490 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KHQ82_08495 PF01266 FAD dependent oxidoreductase KHQ82_08510 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHQ82_08510 PF04324 BFD-like [2Fe-2S] binding domain KHQ82_08525 PF04199 Putative cyclase KHQ82_08530 PF17156 Gammaproteobacterial periplasmic sensor domain KHQ82_08530 PF00990 Diguanylate cyclase, GGDEF domain KHQ82_08535 PF06397 Desulfoferrodoxin, N-terminal domain KHQ82_08535 PF01880 Desulfoferrodoxin KHQ82_08540 PF02915 Rubrerythrin KHQ82_08565 PF00753 Metallo-beta-lactamase superfamily KHQ82_08565 PF00258 Flavodoxin KHQ82_08565 PF00301 Rubredoxin KHQ82_08580 PF01515 Phosphate acetyl/butaryl transferase KHQ82_08585 PF03319 Ethanolamine utilisation protein EutN/carboxysome KHQ82_08590 PF03319 Ethanolamine utilisation protein EutN/carboxysome KHQ82_08595 PF02502 Ribose/Galactose Isomerase KHQ82_08600 PF03319 Ethanolamine utilisation protein EutN/carboxysome KHQ82_08605 PF01791 DeoC/LacD family aldolase KHQ82_08610 PF00936 BMC domain KHQ82_08615 PF00936 BMC domain KHQ82_08620 PF00936 BMC domain KHQ82_08625 PF00936 BMC domain KHQ82_08630 PF13237 4Fe-4S dicluster domain KHQ82_08630 PF10531 SLBB domain KHQ82_08630 PF13375 RnfC Barrel sandwich hybrid domain KHQ82_08630 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KHQ82_08635 PF00171 Aldehyde dehydrogenase family KHQ82_08645 PF00121 Triosephosphate isomerase KHQ82_08650 PF00356 Bacterial regulatory proteins, lacI family KHQ82_08655 PF00313 'Cold-shock' DNA-binding domain KHQ82_08660 PF09297 NADH pyrophosphatase zinc ribbon domain KHQ82_08660 PF00293 NUDIX domain KHQ82_08675 PF08241 Methyltransferase domain KHQ82_08685 PF00196 Bacterial regulatory proteins, luxR family KHQ82_08685 PF17874 MalT-like TPR region KHQ82_08695 PF00005 ABC transporter KHQ82_08700 PF00512 His Kinase A (phospho-acceptor) domain KHQ82_08700 PF02702 Osmosensitive K+ channel His kinase sensor domain KHQ82_08700 PF13493 Domain of unknown function (DUF4118) KHQ82_08700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHQ82_08705 PF00486 Transcriptional regulatory protein, C terminal KHQ82_08705 PF00072 Response regulator receiver domain KHQ82_08715 PF14659 Phage integrase, N-terminal SAM-like domain KHQ82_08715 PF00589 Phage integrase family KHQ82_08735 PF02463 RecF/RecN/SMC N terminal domain KHQ82_08755 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) KHQ82_08795 PF00886 Ribosomal protein S16 KHQ82_08810 PF14071 Putative coat protein KHQ82_08815 PF14667 Polysaccharide biosynthesis C-terminal domain KHQ82_08815 PF01943 Polysaccharide biosynthesis protein KHQ82_08830 PF01327 Polypeptide deformylase KHQ82_08835 PF13333 Integrase core domain KHQ82_08835 PF00665 Integrase core domain KHQ82_08835 PF13276 HTH-like domain KHQ82_08850 PF17770 Ribonuclease J C-terminal domain KHQ82_08850 PF00753 Metallo-beta-lactamase superfamily KHQ82_08850 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KHQ82_08855 PF01177 Asp/Glu/Hydantoin racemase KHQ82_08885 PF00196 Bacterial regulatory proteins, luxR family KHQ82_08890 PF12826 Helix-hairpin-helix motif KHQ82_08890 PF02151 UvrB/uvrC motif KHQ82_08890 PF01541 GIY-YIG catalytic domain KHQ82_08890 PF08459 UvrC Helix-hairpin-helix N-terminal KHQ82_08900 PF02033 Ribosome-binding factor A KHQ82_08905 PF11987 Translation-initiation factor 2 KHQ82_08905 PF00009 Elongation factor Tu GTP binding domain KHQ82_08905 PF04760 Translation initiation factor IF-2, N-terminal region KHQ82_08910 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KHQ82_08915 PF04296 Protein of unknown function (DUF448) KHQ82_08920 PF08529 NusA N-terminal domain KHQ82_08920 PF13184 NusA-like KH domain KHQ82_08920 PF00575 S1 RNA binding domain KHQ82_08925 PF17384 RimP C-terminal SH3 domain KHQ82_08925 PF02576 RimP N-terminal domain KHQ82_08930 PF00588 SpoU rRNA Methylase family KHQ82_08930 PF08032 RNA 2'-O ribose methyltransferase substrate binding KHQ82_08935 PF01966 HD domain KHQ82_08935 PF00072 Response regulator receiver domain KHQ82_08950 PF02256 Iron hydrogenase small subunit KHQ82_08950 PF02906 Iron only hydrogenase large subunit, C-terminal domain KHQ82_08950 PF12838 4Fe-4S dicluster domain KHQ82_08955 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KHQ82_08955 PF00037 4Fe-4S binding domain KHQ82_08955 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KHQ82_08980 PF00698 Acyl transferase domain KHQ82_08980 PF08240 Alcohol dehydrogenase GroES-like domain KHQ82_08980 PF00107 Zinc-binding dehydrogenase KHQ82_08980 PF08659 KR domain KHQ82_08980 PF00109 Beta-ketoacyl synthase, N-terminal domain KHQ82_08980 PF16197 Ketoacyl-synthetase C-terminal extension KHQ82_08980 PF00550 Phosphopantetheine attachment site KHQ82_08980 PF14765 Polyketide synthase dehydratase KHQ82_08980 PF02801 Beta-ketoacyl synthase, C-terminal domain KHQ82_09035 PF00403 Heavy-metal-associated domain KHQ82_09040 PF01790 Prolipoprotein diacylglyceryl transferase KHQ82_09055 PF00512 His Kinase A (phospho-acceptor) domain KHQ82_09055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHQ82_09060 PF00072 Response regulator receiver domain KHQ82_09060 PF00486 Transcriptional regulatory protein, C terminal KHQ82_09075 PF00089 Trypsin KHQ82_09080 PF00269 Small, acid-soluble spore proteins, alpha/beta type KHQ82_09085 PF02568 Thiamine biosynthesis protein (ThiI) KHQ82_09085 PF02926 THUMP domain KHQ82_09090 PF13185 GAF domain KHQ82_09095 PF00163 Ribosomal protein S4/S9 N-terminal domain KHQ82_09095 PF01479 S4 domain KHQ82_09105 PF02645 Uncharacterised protein, DegV family COG1307 KHQ82_09110 PF02074 Carboxypeptidase Taq (M32) metallopeptidase KHQ82_09120 PF01212 Beta-eliminating lyase KHQ82_09125 PF09529 Integral membrane protein (intg_mem_TP0381) KHQ82_09135 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KHQ82_09150 PF00849 RNA pseudouridylate synthase KHQ82_09150 PF01479 S4 domain KHQ82_09155 PF02634 FdhD/NarQ family KHQ82_09160 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KHQ82_09160 PF00384 Molybdopterin oxidoreductase KHQ82_09160 PF01568 Molydopterin dinucleotide binding domain KHQ82_09160 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KHQ82_09160 PF12838 4Fe-4S dicluster domain KHQ82_09165 PF00037 4Fe-4S binding domain KHQ82_09165 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KHQ82_09165 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KHQ82_09195 PF00005 ABC transporter KHQ82_09195 PF02687 FtsX-like permease family KHQ82_09195 PF12704 MacB-like periplasmic core domain KHQ82_09205 PF01175 Urocanase Rossmann-like domain KHQ82_09205 PF17391 Urocanase N-terminal domain KHQ82_09205 PF17392 Urocanase C-terminal domain KHQ82_09210 PF00221 Aromatic amino acid lyase KHQ82_09215 PF01979 Amidohydrolase family KHQ82_09220 PF07837 Formiminotransferase domain, N-terminal subdomain KHQ82_09220 PF02971 Formiminotransferase domain KHQ82_09245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KHQ82_09245 PF00005 ABC transporter KHQ82_09250 PF12911 N-terminal TM domain of oligopeptide transport permease C KHQ82_09250 PF00528 Binding-protein-dependent transport system inner membrane component KHQ82_09255 PF00528 Binding-protein-dependent transport system inner membrane component KHQ82_09260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KHQ82_09275 PF01048 Phosphorylase superfamily KHQ82_09280 PF00664 ABC transporter transmembrane region KHQ82_09280 PF00005 ABC transporter KHQ82_09285 PF00664 ABC transporter transmembrane region KHQ82_09285 PF00005 ABC transporter KHQ82_09295 PF00583 Acetyltransferase (GNAT) family KHQ82_09300 PF02645 Uncharacterised protein, DegV family COG1307 KHQ82_09305 PF13302 Acetyltransferase (GNAT) domain KHQ82_09310 PF13411 MerR HTH family regulatory protein KHQ82_09310 PF07739 TipAS antibiotic-recognition domain KHQ82_09315 PF00365 Phosphofructokinase KHQ82_09335 PF00664 ABC transporter transmembrane region KHQ82_09335 PF00005 ABC transporter KHQ82_09340 PF00005 ABC transporter KHQ82_09340 PF00664 ABC transporter transmembrane region KHQ82_09350 PF01451 Low molecular weight phosphotyrosine protein phosphatase KHQ82_09355 PF01758 Sodium Bile acid symporter family KHQ82_09380 PF00005 ABC transporter KHQ82_09385 PF01938 TRAM domain KHQ82_09385 PF05958 tRNA (Uracil-5-)-methyltransferase KHQ82_09390 PF13091 PLD-like domain KHQ82_09390 PF13396 Phospholipase_D-nuclease N-terminal KHQ82_09395 PF00871 Acetokinase family KHQ82_09400 PF01515 Phosphate acetyl/butaryl transferase KHQ82_09405 PF05343 M42 glutamyl aminopeptidase KHQ82_09415 PF00005 ABC transporter KHQ82_09430 PF01906 Putative heavy-metal-binding KHQ82_09440 PF00291 Pyridoxal-phosphate dependent enzyme KHQ82_09445 PF06426 Serine acetyltransferase, N-terminal KHQ82_09445 PF00132 Bacterial transferase hexapeptide (six repeats) KHQ82_09510 PF04073 Aminoacyl-tRNA editing domain KHQ82_09510 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KHQ82_09510 PF03129 Anticodon binding domain KHQ82_09515 PF02163 Peptidase family M50 KHQ82_09515 PF17820 PDZ domain KHQ82_09520 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KHQ82_09520 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KHQ82_09520 PF13288 DXP reductoisomerase C-terminal domain KHQ82_09530 PF01255 Putative undecaprenyl diphosphate synthase KHQ82_09535 PF01765 Ribosome recycling factor KHQ82_09540 PF00696 Amino acid kinase family KHQ82_09545 PF00889 Elongation factor TS KHQ82_09550 PF00318 Ribosomal protein S2 KHQ82_09555 PF00692 dUTPase KHQ82_09560 PF00589 Phage integrase family KHQ82_09560 PF02899 Phage integrase, N-terminal SAM-like domain KHQ82_09565 PF01134 Glucose inhibited division protein A KHQ82_09570 PF01042 Endoribonuclease L-PSP KHQ82_09575 PF05257 CHAP domain KHQ82_09575 PF01476 LysM domain KHQ82_09585 PF00781 Diacylglycerol kinase catalytic domain KHQ82_09590 PF03129 Anticodon binding domain KHQ82_09590 PF02824 TGS domain KHQ82_09590 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KHQ82_09590 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KHQ82_09600 PF01209 ubiE/COQ5 methyltransferase family KHQ82_09605 PF07319 Primosomal protein DnaI N-terminus KHQ82_09605 PF01695 IstB-like ATP binding protein KHQ82_09615 PF01121 Dephospho-CoA kinase KHQ82_09620 PF01926 50S ribosome-binding GTPase KHQ82_09620 PF01018 GTP1/OBG KHQ82_09620 PF04055 Radical SAM superfamily KHQ82_09625 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KHQ82_09625 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KHQ82_09625 PF06827 Zinc finger found in FPG and IleRS KHQ82_09630 PF01367 5'-3' exonuclease, C-terminal SAM fold KHQ82_09630 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KHQ82_09630 PF00476 DNA polymerase family A KHQ82_09635 PF02557 D-alanyl-D-alanine carboxypeptidase KHQ82_09655 PF13419 Haloacid dehalogenase-like hydrolase KHQ82_09665 PF02881 SRP54-type protein, helical bundle domain KHQ82_09665 PF00448 SRP54-type protein, GTPase domain KHQ82_09665 PF02978 Signal peptide binding domain KHQ82_09675 PF04297 Putative helix-turn-helix protein, YlxM / p13 like KHQ82_09680 PF00448 SRP54-type protein, GTPase domain KHQ82_09680 PF02881 SRP54-type protein, helical bundle domain KHQ82_09685 PF08264 Anticodon-binding domain of tRNA KHQ82_09685 PF00133 tRNA synthetases class I (I, L, M and V) KHQ82_09685 PF13603 Leucyl-tRNA synthetase, Domain 2 KHQ82_09685 PF09334 tRNA synthetases class I (M) KHQ82_09695 PF01235 Sodium:alanine symporter family KHQ82_09700 PF16199 Radical_SAM C-terminal domain KHQ82_09700 PF04055 Radical SAM superfamily KHQ82_09705 PF01795 MraW methylase family KHQ82_09710 PF10397 Adenylosuccinate lyase C-terminus KHQ82_09710 PF00206 Lyase KHQ82_09720 PF04608 Phosphatidylglycerophosphatase A KHQ82_09730 PF01636 Phosphotransferase enzyme family KHQ82_09735 PF00551 Formyl transferase KHQ82_09735 PF02911 Formyl transferase, C-terminal domain KHQ82_09740 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KHQ82_09740 PF00271 Helicase conserved C-terminal domain KHQ82_09740 PF17764 3′ DNA-binding domain (3′BD) KHQ82_09740 PF18074 Primosomal protein N C-terminal domain KHQ82_09740 PF04851 Type III restriction enzyme, res subunit KHQ82_09745 PF01192 RNA polymerase Rpb6 KHQ82_09750 PF00625 Guanylate kinase KHQ82_09755 PF05670 NFACT protein RNA binding domain KHQ82_09765 PF13333 Integrase core domain KHQ82_09765 PF00665 Integrase core domain KHQ82_09765 PF13276 HTH-like domain KHQ82_09770 PF04055 Radical SAM superfamily KHQ82_09775 PF12848 ABC transporter KHQ82_09775 PF00005 ABC transporter KHQ82_09775 PF16326 ABC transporter C-terminal domain KHQ82_09780 PF02386 Cation transport protein KHQ82_09790 PF01522 Polysaccharide deacetylase KHQ82_09815 PF05958 tRNA (Uracil-5-)-methyltransferase KHQ82_09815 PF01938 TRAM domain KHQ82_09840 PF01648 4'-phosphopantetheinyl transferase superfamily KHQ82_09845 PF17757 UvrB interaction domain KHQ82_09845 PF12344 Ultra-violet resistance protein B KHQ82_09845 PF02151 UvrB/uvrC motif KHQ82_09845 PF04851 Type III restriction enzyme, res subunit KHQ82_09845 PF00271 Helicase conserved C-terminal domain KHQ82_09850 PF10396 GTP-binding protein TrmE N-terminus KHQ82_09850 PF12631 MnmE helical domain KHQ82_09850 PF01926 50S ribosome-binding GTPase KHQ82_09860 PF06968 Biotin and Thiamin Synthesis associated domain KHQ82_09860 PF04055 Radical SAM superfamily KHQ82_09865 PF02310 B12 binding domain KHQ82_09865 PF04055 Radical SAM superfamily KHQ82_09870 PF01225 Mur ligase family, catalytic domain KHQ82_09870 PF08245 Mur ligase middle domain KHQ82_09870 PF02875 Mur ligase family, glutamate ligase domain KHQ82_09875 PF02887 Pyruvate kinase, alpha/beta domain KHQ82_09875 PF00224 Pyruvate kinase, barrel domain KHQ82_09875 PF00391 PEP-utilising enzyme, mobile domain KHQ82_09880 PF00365 Phosphofructokinase KHQ82_09885 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KHQ82_09885 PF01336 OB-fold nucleic acid binding domain KHQ82_09885 PF07733 Bacterial DNA polymerase III alpha NTPase domain KHQ82_09885 PF14579 Helix-hairpin-helix motif KHQ82_09885 PF02811 PHP domain KHQ82_09900 PF01471 Putative peptidoglycan binding domain KHQ82_09900 PF01476 LysM domain KHQ82_09900 PF01510 N-acetylmuramoyl-L-alanine amidase KHQ82_09905 PF13087 AAA domain KHQ82_09905 PF13195 Protein of unknown function (DUF4011) KHQ82_09905 PF13086 AAA domain KHQ82_09915 PF01380 SIS domain KHQ82_09935 PF00483 Nucleotidyl transferase KHQ82_09935 PF00132 Bacterial transferase hexapeptide (six repeats) KHQ82_09940 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KHQ82_09940 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KHQ82_09940 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KHQ82_09940 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KHQ82_09960 PF13537 Glutamine amidotransferase domain KHQ82_09960 PF00733 Asparagine synthase KHQ82_09970 PF01370 NAD dependent epimerase/dehydratase family KHQ82_09975 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KHQ82_09975 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KHQ82_09975 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KHQ82_09985 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KHQ82_09995 PF02397 Bacterial sugar transferase KHQ82_10000 PF00009 Elongation factor Tu GTP binding domain KHQ82_10005 PF01507 Phosphoadenosine phosphosulfate reductase family KHQ82_10015 PF02719 Polysaccharide biosynthesis protein KHQ82_10020 PF00005 ABC transporter KHQ82_10020 PF12857 TOBE-like domain KHQ82_10030 PF13416 Bacterial extracellular solute-binding protein KHQ82_10035 PF00871 Acetokinase family KHQ82_10040 PF02384 N-6 DNA Methylase KHQ82_10045 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KHQ82_10055 PF00733 Asparagine synthase KHQ82_10055 PF13537 Glutamine amidotransferase domain KHQ82_10060 PF01734 Patatin-like phospholipase KHQ82_10065 PF01809 Putative membrane protein insertion efficiency factor KHQ82_10075 PF07687 Peptidase dimerisation domain KHQ82_10075 PF01546 Peptidase family M20/M25/M40 KHQ82_10080 PF02673 Bacitracin resistance protein BacA KHQ82_10090 PF00999 Sodium/hydrogen exchanger family KHQ82_10095 PF01063 Amino-transferase class IV KHQ82_10100 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KHQ82_10100 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KHQ82_10110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KHQ82_10110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KHQ82_10115 PF00266 Aminotransferase class-V KHQ82_10135 PF04055 Radical SAM superfamily KHQ82_10135 PF12544 Lysine-2,3-aminomutase KHQ82_10180 PF02687 FtsX-like permease family KHQ82_10180 PF00005 ABC transporter KHQ82_10180 PF12704 MacB-like periplasmic core domain KHQ82_10190 PF00440 Bacterial regulatory proteins, tetR family KHQ82_10205 PF00465 Iron-containing alcohol dehydrogenase KHQ82_10210 PF01638 HxlR-like helix-turn-helix KHQ82_10230 PF00486 Transcriptional regulatory protein, C terminal KHQ82_10230 PF00072 Response regulator receiver domain KHQ82_10235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHQ82_10235 PF00989 PAS fold KHQ82_10235 PF16736 Single Cache-like KHQ82_10235 PF00512 His Kinase A (phospho-acceptor) domain KHQ82_10260 PF00005 ABC transporter KHQ82_10265 PF00438 S-adenosylmethionine synthetase, N-terminal domain KHQ82_10265 PF02773 S-adenosylmethionine synthetase, C-terminal domain KHQ82_10265 PF02772 S-adenosylmethionine synthetase, central domain KHQ82_10270 PF00581 Rhodanese-like domain KHQ82_10280 PF07853 Protein of unknown function (DUF1648) KHQ82_10285 PF01022 Bacterial regulatory protein, arsR family KHQ82_10295 PF02525 Flavodoxin-like fold KHQ82_10315 PF00781 Diacylglycerol kinase catalytic domain KHQ82_10325 PF00009 Elongation factor Tu GTP binding domain KHQ82_10325 PF00679 Elongation factor G C-terminus KHQ82_10325 PF14492 Elongation Factor G, domain II KHQ82_10325 PF03764 Elongation factor G, domain IV KHQ82_10370 PF06271 RDD family KHQ82_10375 PF00196 Bacterial regulatory proteins, luxR family KHQ82_10375 PF00072 Response regulator receiver domain KHQ82_10380 PF07730 Histidine kinase KHQ82_10395 PF00465 Iron-containing alcohol dehydrogenase KHQ82_10400 PF03099 Biotin/lipoate A/B protein ligase family KHQ82_10400 PF10437 Bacterial lipoate protein ligase C-terminus KHQ82_10405 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHQ82_10405 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KHQ82_10415 PF01047 MarR family KHQ82_10420 PF00596 Class II Aldolase and Adducin N-terminal domain KHQ82_10425 PF00465 Iron-containing alcohol dehydrogenase KHQ82_10430 PF01008 Initiation factor 2 subunit family KHQ82_10435 PF01979 Amidohydrolase family KHQ82_10440 PF01048 Phosphorylase superfamily KHQ82_10445 PF02653 Branched-chain amino acid transport system / permease component KHQ82_10455 PF00005 ABC transporter KHQ82_10460 PF02608 ABC transporter substrate-binding protein PnrA-like KHQ82_10485 PF01209 ubiE/COQ5 methyltransferase family KHQ82_10505 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KHQ82_10515 PF12034 Domain of unknown function (DUF3520) KHQ82_10515 PF00092 von Willebrand factor type A domain KHQ82_10515 PF12450 von Willebrand factor KHQ82_10540 PF13302 Acetyltransferase (GNAT) domain KHQ82_10550 PF13443 Cro/C1-type HTH DNA-binding domain KHQ82_10565 PF05684 Protein of unknown function (DUF819) KHQ82_10590 PF00440 Bacterial regulatory proteins, tetR family KHQ82_10590 PF18665 Tetracyclin repressor-like, C-terminal domain KHQ82_10635 PF13302 Acetyltransferase (GNAT) domain KHQ82_10675 PF01381 Helix-turn-helix