locus-tag class description TepRe1_0001 PF00308 Bacterial dnaA protein TepRe1_0001 PF08299 Bacterial dnaA protein helix-turn-helix TepRe1_0001 PF11638 DnaA N-terminal domain TepRe1_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain TepRe1_0002 PF02767 DNA polymerase III beta subunit, central domain TepRe1_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain TepRe1_0004 PF02463 RecF/RecN/SMC N terminal domain TepRe1_0006 PF04025 Domain of unknown function (DUF370) TepRe1_0007 PF01751 Toprim domain TepRe1_0007 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TepRe1_0007 PF00986 DNA gyrase B subunit, carboxyl terminus TepRe1_0007 PF00204 DNA gyrase B TepRe1_0008 PF03989 DNA gyrase C-terminal domain, beta-propeller TepRe1_0008 PF00521 DNA gyrase/topoisomerase IV, subunit A TepRe1_0009 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain TepRe1_0009 PF01276 Orn/Lys/Arg decarboxylase, major domain TepRe1_0010 PF02223 Thymidylate kinase TepRe1_0011 PF06153 Cyclic-di-AMP receptor TepRe1_0012 PF03885 Protein of unknown function (DUF327) TepRe1_0014 PF04468 PSP1 C-terminal conserved region TepRe1_0015 PF04298 Putative neutral zinc metallopeptidase TepRe1_0016 PF00989 PAS fold TepRe1_0016 PF00158 Sigma-54 interaction domain TepRe1_0016 PF02954 Bacterial regulatory protein, Fis family TepRe1_0017 PF01266 FAD dependent oxidoreductase TepRe1_0018 PF00701 Dihydrodipicolinate synthetase family TepRe1_0020 PF05175 Methyltransferase small domain TepRe1_0021 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TepRe1_0023 PF00664 ABC transporter transmembrane region TepRe1_0023 PF00005 ABC transporter TepRe1_0024 PF00664 ABC transporter transmembrane region TepRe1_0024 PF00005 ABC transporter TepRe1_0033 PF03807 NADP oxidoreductase coenzyme F420-dependent TepRe1_0033 PF14748 Pyrroline-5-carboxylate reductase dimerisation TepRe1_0034 PF18277 AbrB C-terminal domain TepRe1_0034 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin TepRe1_0037 PF01381 Helix-turn-helix TepRe1_0038 PF01321 Creatinase/Prolidase N-terminal domain TepRe1_0038 PF00557 Metallopeptidase family M24 TepRe1_0039 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TepRe1_0040 PF00528 Binding-protein-dependent transport system inner membrane component TepRe1_0041 PF12911 N-terminal TM domain of oligopeptide transport permease C TepRe1_0041 PF00528 Binding-protein-dependent transport system inner membrane component TepRe1_0042 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TepRe1_0042 PF00005 ABC transporter TepRe1_0043 PF00005 ABC transporter TepRe1_0043 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TepRe1_0044 PF02901 Pyruvate formate lyase-like TepRe1_0044 PF01228 Glycine radical TepRe1_0045 PF04055 Radical SAM superfamily TepRe1_0046 PF00171 Aldehyde dehydrogenase family TepRe1_0049 PF02447 GntP family permease TepRe1_0052 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TepRe1_0052 PF02378 Phosphotransferase system, EIIC TepRe1_0054 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit TepRe1_0058 PF03806 AbgT putative transporter family TepRe1_0059 PF07687 Peptidase dimerisation domain TepRe1_0059 PF01546 Peptidase family M20/M25/M40 TepRe1_0060 PF07687 Peptidase dimerisation domain TepRe1_0060 PF01546 Peptidase family M20/M25/M40 TepRe1_0064 PF05378 Hydantoinase/oxoprolinase N-terminal region TepRe1_0064 PF01968 Hydantoinase/oxoprolinase TepRe1_0067 PF00890 FAD binding domain TepRe1_0070 PF01588 Putative tRNA binding domain TepRe1_0070 PF09334 tRNA synthetases class I (M) TepRe1_0070 PF00133 tRNA synthetases class I (I, L, M and V) TepRe1_0073 PF01026 TatD related DNase TepRe1_0074 PF06463 Molybdenum Cofactor Synthesis C TepRe1_0074 PF04055 Radical SAM superfamily TepRe1_0075 PF00398 Ribosomal RNA adenine dimethylase TepRe1_0076 PF04308 Ribonuclease H-like TepRe1_0078 PF05582 YabG peptidase U57 TepRe1_0079 PF08486 Stage II sporulation protein TepRe1_0080 PF06257 Biofilm formation stimulator VEG TepRe1_0082 PF00188 Cysteine-rich secretory protein family TepRe1_0084 PF01476 LysM domain TepRe1_0085 PF00288 GHMP kinases N terminal domain TepRe1_0085 PF08544 GHMP kinases C terminal TepRe1_0086 PF00392 Bacterial regulatory proteins, gntR family TepRe1_0086 PF07729 FCD domain TepRe1_0087 PF00132 Bacterial transferase hexapeptide (six repeats) TepRe1_0087 PF12804 MobA-like NTP transferase domain TepRe1_0088 PF00156 Phosphoribosyl transferase domain TepRe1_0088 PF09182 Bacterial purine repressor, N-terminal TepRe1_0089 PF04026 SpoVG TepRe1_0090 PF00132 Bacterial transferase hexapeptide (six repeats) TepRe1_0090 PF00483 Nucleotidyl transferase TepRe1_0091 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TepRe1_0091 PF14572 Phosphoribosyl synthetase-associated domain TepRe1_0092 PF01386 Ribosomal L25p family TepRe1_0092 PF14693 Ribosomal protein TL5, C-terminal domain TepRe1_0093 PF01195 Peptidyl-tRNA hydrolase TepRe1_0098 PF01381 Helix-turn-helix TepRe1_0100 PF00085 Thioredoxin TepRe1_0101 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment TepRe1_0101 PF01297 Zinc-uptake complex component A periplasmic TepRe1_0102 PF00005 ABC transporter TepRe1_0103 PF00950 ABC 3 transport family TepRe1_0104 PF01475 Ferric uptake regulator family TepRe1_0111 PF09827 CRISPR associated protein Cas2 TepRe1_0112 PF02310 B12 binding domain TepRe1_0113 PF13941 MutL protein TepRe1_0114 PF06368 Methylaspartate mutase E chain (MutE) TepRe1_0115 PF07476 Methylaspartate ammonia-lyase C-terminus TepRe1_0115 PF05034 Methylaspartate ammonia-lyase N-terminus TepRe1_0118 PF06207 Protein of unknown function (DUF1002) TepRe1_0119 PF07478 D-ala D-ala ligase C-terminus TepRe1_0130 PF03313 Serine dehydratase alpha chain TepRe1_0132 PF00171 Aldehyde dehydrogenase family TepRe1_0134 PF03480 Bacterial extracellular solute-binding protein, family 7 TepRe1_0135 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component TepRe1_0136 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TepRe1_0141 PF00994 Probable molybdopterin binding domain TepRe1_0141 PF02464 Competence-damaged protein TepRe1_0143 PF02954 Bacterial regulatory protein, Fis family TepRe1_0143 PF00158 Sigma-54 interaction domain TepRe1_0143 PF13426 PAS domain TepRe1_0144 PF02127 Aminopeptidase I zinc metalloprotease (M18) TepRe1_0147 PF12822 ECF transporter, substrate-specific component TepRe1_0148 PF00291 Pyridoxal-phosphate dependent enzyme TepRe1_0149 PF17099 Tryptophan transporter TrpP TepRe1_0150 PF17674 HHH domain TepRe1_0150 PF00575 S1 RNA binding domain TepRe1_0150 PF09371 Tex-like protein N-terminal domain TepRe1_0150 PF16921 Tex protein YqgF-like domain TepRe1_0152 PF00266 Aminotransferase class-V TepRe1_0153 PF13411 MerR HTH family regulatory protein TepRe1_0154 PF00682 HMGL-like TepRe1_0155 PF00330 Aconitase family (aconitate hydratase) TepRe1_0156 PF00180 Isocitrate/isopropylmalate dehydrogenase TepRe1_0156 PF18324 Hypothetical protein TT1725 TepRe1_0157 PF17774 Putative RNA-binding domain in YlmH TepRe1_0157 PF01479 S4 domain TepRe1_0158 PF01553 Acyltransferase TepRe1_0159 PF00245 Alkaline phosphatase TepRe1_0161 PF01042 Endoribonuclease L-PSP TepRe1_0162 PF00291 Pyridoxal-phosphate dependent enzyme TepRe1_0162 PF13291 ACT domain TepRe1_0164 PF01554 MatE TepRe1_0166 PF01555 DNA methylase TepRe1_0167 PF17757 UvrB interaction domain TepRe1_0167 PF03461 TRCF domain TepRe1_0167 PF00271 Helicase conserved C-terminal domain TepRe1_0167 PF00270 DEAD/DEAH box helicase TepRe1_0167 PF02559 CarD-like/TRCF domain TepRe1_0168 PF13145 PPIC-type PPIASE domain TepRe1_0169 PF15714 Stage V sporulation protein T C-terminal, transcription factor TepRe1_0169 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin TepRe1_0170 PF01293 Phosphoenolpyruvate carboxykinase TepRe1_0171 PF01943 Polysaccharide biosynthesis protein TepRe1_0171 PF14667 Polysaccharide biosynthesis C-terminal domain TepRe1_0172 PF03819 MazG nucleotide pyrophosphohydrolase domain TepRe1_0173 PF00216 Bacterial DNA-binding protein TepRe1_0175 PF08486 Stage II sporulation protein TepRe1_0179 PF00575 S1 RNA binding domain TepRe1_0180 PF02541 Ppx/GppA phosphatase family TepRe1_0182 PF04997 RNA polymerase Rpb1, domain 1 TepRe1_0182 PF00623 RNA polymerase Rpb1, domain 2 TepRe1_0182 PF04983 RNA polymerase Rpb1, domain 3 TepRe1_0182 PF04998 RNA polymerase Rpb1, domain 5 TepRe1_0182 PF05000 RNA polymerase Rpb1, domain 4 TepRe1_0183 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family TepRe1_0184 PF00164 Ribosomal protein S12/S23 TepRe1_0186 PF00679 Elongation factor G C-terminus TepRe1_0186 PF03764 Elongation factor G, domain IV TepRe1_0186 PF00009 Elongation factor Tu GTP binding domain TepRe1_0186 PF03144 Elongation factor Tu domain 2 TepRe1_0186 PF14492 Elongation Factor G, domain II TepRe1_0187 PF03143 Elongation factor Tu C-terminal domain TepRe1_0187 PF00009 Elongation factor Tu GTP binding domain TepRe1_0187 PF03144 Elongation factor Tu domain 2 TepRe1_0189 PF00297 Ribosomal protein L3 TepRe1_0190 PF00573 Ribosomal protein L4/L1 family TepRe1_0191 PF00276 Ribosomal protein L23 TepRe1_0192 PF00181 Ribosomal Proteins L2, RNA binding domain TepRe1_0192 PF03947 Ribosomal Proteins L2, C-terminal domain TepRe1_0194 PF00237 Ribosomal protein L22p/L17e TepRe1_0195 PF00189 Ribosomal protein S3, C-terminal domain TepRe1_0195 PF07650 KH domain TepRe1_0196 PF00252 Ribosomal protein L16p/L10e TepRe1_0197 PF00831 Ribosomal L29 protein TepRe1_0198 PF00366 Ribosomal protein S17 TepRe1_0200 PF00467 KOW motif TepRe1_0200 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 TepRe1_0201 PF00673 ribosomal L5P family C-terminus TepRe1_0201 PF00281 Ribosomal protein L5 TepRe1_0202 PF00253 Ribosomal protein S14p/S29e TepRe1_0203 PF00410 Ribosomal protein S8 TepRe1_0204 PF00347 Ribosomal protein L6 TepRe1_0205 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast TepRe1_0206 PF00333 Ribosomal protein S5, N-terminal domain TepRe1_0206 PF03719 Ribosomal protein S5, C-terminal domain TepRe1_0207 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A TepRe1_0208 PF00344 SecY translocase TepRe1_0209 PF05191 Adenylate kinase, active site lid TepRe1_0210 PF00557 Metallopeptidase family M24 TepRe1_0212 PF01176 Translation initiation factor 1A / IF-1 TepRe1_0214 PF00416 Ribosomal protein S13/S18 TepRe1_0215 PF00411 Ribosomal protein S11 TepRe1_0216 PF01479 S4 domain TepRe1_0216 PF00163 Ribosomal protein S4/S9 N-terminal domain TepRe1_0217 PF01000 RNA polymerase Rpb3/RpoA insert domain TepRe1_0217 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain TepRe1_0217 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain TepRe1_0218 PF01196 Ribosomal protein L17 TepRe1_0219 PF00005 ABC transporter TepRe1_0220 PF00005 ABC transporter TepRe1_0221 PF02361 Cobalt transport protein TepRe1_0222 PF01416 tRNA pseudouridine synthase TepRe1_0223 PF00572 Ribosomal protein L13 TepRe1_0224 PF00380 Ribosomal protein S9/S16 TepRe1_0225 PF04055 Radical SAM superfamily TepRe1_0225 PF06968 Biotin and Thiamin Synthesis associated domain TepRe1_0226 PF01926 50S ribosome-binding GTPase TepRe1_0226 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal TepRe1_0227 PF01554 MatE TepRe1_0230 PF01259 SAICAR synthetase TepRe1_0231 PF07992 Pyridine nucleotide-disulphide oxidoreductase TepRe1_0232 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TepRe1_0232 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TepRe1_0235 PF00152 tRNA synthetases class II (D, K and N) TepRe1_0235 PF01336 OB-fold nucleic acid binding domain TepRe1_0236 PF01047 MarR family TepRe1_0239 PF02769 AIR synthase related protein, C-terminal domain TepRe1_0239 PF00586 AIR synthase related protein, N-terminal domain TepRe1_0241 PF02403 Seryl-tRNA synthetase N-terminal domain TepRe1_0241 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TepRe1_0246 PF10609 NUBPL iron-transfer P-loop NTPase TepRe1_0246 PF01883 Iron-sulfur cluster assembly protein TepRe1_0247 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TepRe1_0247 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TepRe1_0248 PF02001 Protein of unknown function DUF134 TepRe1_0249 PF10609 NUBPL iron-transfer P-loop NTPase TepRe1_0254 PF00933 Glycosyl hydrolase family 3 N terminal domain TepRe1_0254 PF01915 Glycosyl hydrolase family 3 C-terminal domain TepRe1_0256 PF17910 FeoB cytosolic helical domain TepRe1_0256 PF07670 Nucleoside recognition TepRe1_0256 PF07664 Ferrous iron transport protein B C terminus TepRe1_0256 PF02421 Ferrous iron transport protein B TepRe1_0256 PF04023 FeoA domain TepRe1_0259 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TepRe1_0259 PF07992 Pyridine nucleotide-disulphide oxidoreductase TepRe1_0269 PF01116 Fructose-bisphosphate aldolase class-II TepRe1_0270 PF00107 Zinc-binding dehydrogenase TepRe1_0270 PF08240 Alcohol dehydrogenase GroES-like domain TepRe1_0271 PF03613 PTS system mannose/fructose/sorbose family IID component TepRe1_0272 PF03609 PTS system sorbose-specific iic component TepRe1_0273 PF03830 PTS system sorbose subfamily IIB component TepRe1_0274 PF03610 PTS system fructose IIA component TepRe1_0274 PF03830 PTS system sorbose subfamily IIB component TepRe1_0277 PF00271 Helicase conserved C-terminal domain TepRe1_0277 PF00270 DEAD/DEAH box helicase TepRe1_0280 PF05173 Dihydrodipicolinate reductase, C-terminus TepRe1_0280 PF01113 Dihydrodipicolinate reductase, N-terminus TepRe1_0281 PF06445 GyrI-like small molecule binding domain TepRe1_0281 PF13411 MerR HTH family regulatory protein TepRe1_0282 PF09335 SNARE associated Golgi protein TepRe1_0284 PF13533 Biotin-lipoyl like TepRe1_0285 PF00873 AcrB/AcrD/AcrF family TepRe1_0291 PF02310 B12 binding domain TepRe1_0291 PF02607 B12 binding domain TepRe1_0294 PF02310 B12 binding domain TepRe1_0294 PF02607 B12 binding domain TepRe1_0300 PF02310 B12 binding domain TepRe1_0300 PF02607 B12 binding domain TepRe1_0303 PF01268 Formate--tetrahydrofolate ligase TepRe1_0304 PF04961 Formiminotransferase-cyclodeaminase TepRe1_0308 PF07992 Pyridine nucleotide-disulphide oxidoreductase TepRe1_0308 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TepRe1_0310 PF02607 B12 binding domain TepRe1_0310 PF02310 B12 binding domain TepRe1_0313 PF00082 Subtilase family TepRe1_0314 PF00072 Response regulator receiver domain TepRe1_0315 PF13426 PAS domain TepRe1_0315 PF13188 PAS domain TepRe1_0315 PF00989 PAS fold TepRe1_0315 PF00512 His Kinase A (phospho-acceptor) domain TepRe1_0315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TepRe1_0317 PF07497 Rho termination factor, RNA-binding domain TepRe1_0317 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TepRe1_0317 PF07498 Rho termination factor, N-terminal domain TepRe1_0319 PF07670 Nucleoside recognition TepRe1_0320 PF07670 Nucleoside recognition TepRe1_0321 PF03422 Carbohydrate binding module (family 6) TepRe1_0321 PF01522 Polysaccharide deacetylase TepRe1_0321 PF00457 Glycosyl hydrolases family 11 TepRe1_0323 PF02457 DisA bacterial checkpoint controller nucleotide-binding TepRe1_0326 PF02080 TrkA-C domain TepRe1_0326 PF02254 TrkA-N domain TepRe1_0327 PF02386 Cation transport protein TepRe1_0329 PF08241 Methyltransferase domain TepRe1_0329 PF12697 Alpha/beta hydrolase family TepRe1_0331 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TepRe1_0332 PF00528 Binding-protein-dependent transport system inner membrane component TepRe1_0334 PF00005 ABC transporter TepRe1_0334 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TepRe1_0337 PF00753 Metallo-beta-lactamase superfamily TepRe1_0337 PF00258 Flavodoxin TepRe1_0337 PF00301 Rubredoxin TepRe1_0338 PF00403 Heavy-metal-associated domain TepRe1_0339 PF04073 Aminoacyl-tRNA editing domain TepRe1_0341 PF01791 DeoC/LacD family aldolase TepRe1_0343 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain TepRe1_0343 PF01118 Semialdehyde dehydrogenase, NAD binding domain TepRe1_0344 PF01554 MatE TepRe1_0345 PF01571 Aminomethyltransferase folate-binding domain TepRe1_0345 PF08669 Glycine cleavage T-protein C-terminal barrel domain TepRe1_0346 PF01597 Glycine cleavage H-protein TepRe1_0347 PF02347 Glycine cleavage system P-protein TepRe1_0348 PF02347 Glycine cleavage system P-protein TepRe1_0349 PF07486 Cell Wall Hydrolase TepRe1_0349 PF01471 Putative peptidoglycan binding domain TepRe1_0351 PF17746 SfsA N-terminal OB domain TepRe1_0351 PF03749 Sugar fermentation stimulation protein RE domain TepRe1_0352 PF01614 Bacterial transcriptional regulator TepRe1_0352 PF09339 IclR helix-turn-helix domain TepRe1_0353 PF00465 Iron-containing alcohol dehydrogenase TepRe1_0354 PF01557 Fumarylacetoacetate (FAA) hydrolase family TepRe1_0355 PF07992 Pyridine nucleotide-disulphide oxidoreductase TepRe1_0355 PF18267 Rubredoxin NAD+ reductase C-terminal domain TepRe1_0356 PF00301 Rubredoxin TepRe1_0357 PF02915 Rubrerythrin TepRe1_0358 PF01820 D-ala D-ala ligase N-terminus TepRe1_0358 PF07478 D-ala D-ala ligase C-terminus TepRe1_0361 PF02558 Ketopantoate reductase PanE/ApbA TepRe1_0361 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain TepRe1_0363 PF03061 Thioesterase superfamily TepRe1_0364 PF01790 Prolipoprotein diacylglyceryl transferase TepRe1_0369 PF00704 Glycosyl hydrolases family 18 TepRe1_0371 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B TepRe1_0371 PF00175 Oxidoreductase NAD-binding domain TepRe1_0372 PF13247 4Fe-4S dicluster domain TepRe1_0372 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TepRe1_0372 PF07992 Pyridine nucleotide-disulphide oxidoreductase TepRe1_0375 PF01869 BadF/BadG/BcrA/BcrD ATPase family TepRe1_0376 PF00731 AIR carboxylase TepRe1_0377 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain TepRe1_0377 PF02222 ATP-grasp domain TepRe1_0378 PF01168 Alanine racemase, N-terminal domain TepRe1_0378 PF00842 Alanine racemase, C-terminal domain TepRe1_0379 PF04820 Tryptophan halogenase TepRe1_0381 PF16697 Inner membrane component of T3SS, cytoplasmic domain TepRe1_0382 PF01098 Cell cycle protein TepRe1_0383 PF00905 Penicillin binding protein transpeptidase domain TepRe1_0385 PF00005 ABC transporter TepRe1_0386 PF00005 ABC transporter TepRe1_0386 PF12399 Branched-chain amino acid ATP-binding cassette transporter TepRe1_0387 PF11862 Domain of unknown function (DUF3382) TepRe1_0387 PF02653 Branched-chain amino acid transport system / permease component TepRe1_0388 PF02653 Branched-chain amino acid transport system / permease component TepRe1_0389 PF13458 Periplasmic binding protein TepRe1_0390 PF00166 Chaperonin 10 Kd subunit TepRe1_0392 PF01008 Initiation factor 2 subunit family TepRe1_0397 PF00158 Sigma-54 interaction domain TepRe1_0397 PF13426 PAS domain TepRe1_0397 PF02954 Bacterial regulatory protein, Fis family TepRe1_0398 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TepRe1_0398 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TepRe1_0400 PF00330 Aconitase family (aconitate hydratase) TepRe1_0401 PF00694 Aconitase C-terminal domain TepRe1_0402 PF02310 B12 binding domain TepRe1_0403 PF04303 PrpF protein TepRe1_0404 PF13941 MutL protein TepRe1_0406 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin TepRe1_0407 PF01979 Amidohydrolase family TepRe1_0409 PF00890 FAD binding domain TepRe1_0409 PF02910 Fumarate reductase flavoprotein C-term TepRe1_0411 PF03450 CO dehydrogenase flavoprotein C-terminal domain TepRe1_0411 PF00941 FAD binding domain in molybdopterin dehydrogenase TepRe1_0412 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase TepRe1_0412 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TepRe1_0413 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase TepRe1_0414 PF01979 Amidohydrolase family TepRe1_0415 PF00037 4Fe-4S binding domain TepRe1_0418 PF02348 Cytidylyltransferase TepRe1_0419 PF13478 XdhC Rossmann domain TepRe1_0419 PF02625 XdhC and CoxI family TepRe1_0420 PF02625 XdhC and CoxI family TepRe1_0420 PF13478 XdhC Rossmann domain TepRe1_0421 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TepRe1_0421 PF03459 TOBE domain TepRe1_0424 PF00005 ABC transporter TepRe1_0426 PF02769 AIR synthase related protein, C-terminal domain TepRe1_0426 PF00586 AIR synthase related protein, N-terminal domain TepRe1_0427 PF01206 Sulfurtransferase TusA TepRe1_0428 PF00266 Aminotransferase class-V TepRe1_0433 PF04198 Putative sugar-binding domain TepRe1_0434 PF00596 Class II Aldolase and Adducin N-terminal domain TepRe1_0435 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TepRe1_0435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TepRe1_0437 PF08240 Alcohol dehydrogenase GroES-like domain TepRe1_0437 PF00107 Zinc-binding dehydrogenase TepRe1_0438 PF01053 Cys/Met metabolism PLP-dependent enzyme TepRe1_0439 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TepRe1_0439 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TepRe1_0440 PF00528 Binding-protein-dependent transport system inner membrane component TepRe1_0441 PF12911 N-terminal TM domain of oligopeptide transport permease C TepRe1_0441 PF00528 Binding-protein-dependent transport system inner membrane component TepRe1_0442 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TepRe1_0443 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TepRe1_0443 PF00005 ABC transporter TepRe1_0444 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TepRe1_0444 PF00005 ABC transporter TepRe1_0445 PF01546 Peptidase family M20/M25/M40 TepRe1_0446 PF03313 Serine dehydratase alpha chain TepRe1_0448 PF01891 Cobalt uptake substrate-specific transmembrane region TepRe1_0449 PF00005 ABC transporter TepRe1_0450 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TepRe1_0450 PF07685 CobB/CobQ-like glutamine amidotransferase domain TepRe1_0451 PF01903 CbiX TepRe1_0452 PF02570 Precorrin-8X methylmutase TepRe1_0453 PF01888 CbiD TepRe1_0455 PF05175 Methyltransferase small domain TepRe1_0456 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TepRe1_0457 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TepRe1_0458 PF01890 Cobalamin synthesis G C-terminus TepRe1_0458 PF11760 Cobalamin synthesis G N-terminal TepRe1_0458 PF11761 Cobalamin biosynthesis central region TepRe1_0459 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TepRe1_0460 PF02571 Precorrin-6x reductase CbiJ/CobK TepRe1_0461 PF01488 Shikimate / quinate 5-dehydrogenase TepRe1_0461 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain TepRe1_0461 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain TepRe1_0462 PF03900 Porphobilinogen deaminase, C-terminal domain TepRe1_0462 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain TepRe1_0464 PF00490 Delta-aminolevulinic acid dehydratase TepRe1_0465 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TepRe1_0465 PF14824 Sirohaem biosynthesis protein central TepRe1_0465 PF10414 Sirohaem synthase dimerisation region TepRe1_0466 PF00202 Aminotransferase class-III TepRe1_0467 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase TepRe1_0468 PF01979 Amidohydrolase family TepRe1_0469 PF03932 CutC family TepRe1_0470 PF05698 Bacterial trigger factor protein (TF) C-terminus TepRe1_0472 PF12833 Helix-turn-helix domain TepRe1_0472 PF00072 Response regulator receiver domain TepRe1_0473 PF02743 Cache domain TepRe1_0473 PF00672 HAMP domain TepRe1_0473 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TepRe1_0473 PF06580 Histidine kinase TepRe1_0474 PF00005 ABC transporter TepRe1_0475 PF00005 ABC transporter TepRe1_0476 PF02653 Branched-chain amino acid transport system / permease component TepRe1_0478 PF00365 Phosphofructokinase TepRe1_0480 PF00011 Hsp20/alpha crystallin family TepRe1_0481 PF01648 4'-phosphopantetheinyl transferase superfamily TepRe1_0482 PF03853 YjeF-related protein N-terminus TepRe1_0482 PF01256 Carbohydrate kinase TepRe1_0483 PF00842 Alanine racemase, C-terminal domain TepRe1_0483 PF01168 Alanine racemase, N-terminal domain TepRe1_0484 PF01402 Ribbon-helix-helix protein, copG family TepRe1_0485 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system TepRe1_0487 PF07722 Peptidase C26 TepRe1_0488 PF04951 D-aminopeptidase TepRe1_0489 PF01979 Amidohydrolase family TepRe1_0490 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE TepRe1_0491 PF00814 Glycoprotease family TepRe1_0492 PF00583 Acetyltransferase (GNAT) family TepRe1_0493 PF14602 Hexapeptide repeat of succinyl-transferase TepRe1_0495 PF00005 ABC transporter TepRe1_0495 PF16326 ABC transporter C-terminal domain TepRe1_0495 PF12848 ABC transporter TepRe1_0496 PF05683 Fumarase C-terminus TepRe1_0496 PF05681 Fumarate hydratase (Fumerase) TepRe1_0498 PF00390 Malic enzyme, N-terminal domain TepRe1_0498 PF03949 Malic enzyme, NAD binding domain TepRe1_0502 PF04309 Glycerol-3-phosphate responsive antiterminator TepRe1_0503 PF02308 MgtC family TepRe1_0504 PF01312 FlhB HrpN YscU SpaS Family TepRe1_0506 PF00860 Permease family TepRe1_0509 PF01496 V-type ATPase 116kDa subunit family TepRe1_0510 PF00137 ATP synthase subunit C TepRe1_0513 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TepRe1_0513 PF02874 ATP synthase alpha/beta family, beta-barrel domain TepRe1_0513 PF16886 ATPsynthase alpha/beta subunit N-term extension TepRe1_0514 PF02874 ATP synthase alpha/beta family, beta-barrel domain TepRe1_0514 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TepRe1_0515 PF01813 ATP synthase subunit D TepRe1_0516 PF02954 Bacterial regulatory protein, Fis family TepRe1_0516 PF00158 Sigma-54 interaction domain TepRe1_0516 PF13426 PAS domain TepRe1_0519 PF00375 Sodium:dicarboxylate symporter family TepRe1_0532 PF18255 DNA processing protein A sterile alpha motif domain TepRe1_0532 PF02481 DNA recombination-mediator protein A TepRe1_0538 PF03069 Acetamidase/Formamidase family TepRe1_0541 PF05139 Erythromycin esterase TepRe1_0541 PF00156 Phosphoribosyl transferase domain TepRe1_0542 PF12146 Serine aminopeptidase, S33 TepRe1_0546 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TepRe1_0546 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TepRe1_0547 PF13247 4Fe-4S dicluster domain TepRe1_0548 PF03063 Prismane/CO dehydrogenase family TepRe1_0549 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TepRe1_0552 PF04961 Formiminotransferase-cyclodeaminase TepRe1_0553 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TepRe1_0553 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain TepRe1_0555 PF02219 Methylenetetrahydrofolate reductase TepRe1_0556 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TepRe1_0556 PF07992 Pyridine nucleotide-disulphide oxidoreductase TepRe1_0557 PF13614 AAA domain TepRe1_0558 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit TepRe1_0559 PF04060 Putative Fe-S cluster TepRe1_0559 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit TepRe1_0560 PF00809 Pterin binding enzyme TepRe1_0561 PF03598 CO dehydrogenase/acetyl-CoA synthase complex beta subunit TepRe1_0561 PF18537 Carbon monoxide dehydrogenase subunit alpha N-terminal domain TepRe1_0562 PF01597 Glycine cleavage H-protein TepRe1_0567 PF02660 Glycerol-3-phosphate acyltransferase TepRe1_0568 PF04309 Glycerol-3-phosphate responsive antiterminator TepRe1_0571 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TepRe1_0571 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TepRe1_0572 PF04324 BFD-like [2Fe-2S] binding domain TepRe1_0572 PF01266 FAD dependent oxidoreductase TepRe1_0573 PF04324 BFD-like [2Fe-2S] binding domain TepRe1_0573 PF07992 Pyridine nucleotide-disulphide oxidoreductase TepRe1_0575 PF00158 Sigma-54 interaction domain TepRe1_0575 PF02954 Bacterial regulatory protein, Fis family TepRe1_0575 PF01590 GAF domain TepRe1_0576 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TepRe1_0576 PF00672 HAMP domain TepRe1_0577 PF02733 Dak1 domain TepRe1_0578 PF02734 DAK2 domain TepRe1_0579 PF03610 PTS system fructose IIA component TepRe1_0581 PF01894 Uncharacterised protein family UPF0047 TepRe1_0583 PF11798 IMS family HHH motif TepRe1_0583 PF00817 impB/mucB/samB family TepRe1_0583 PF11799 impB/mucB/samB family C-terminal domain TepRe1_0585 PF01661 Macro domain TepRe1_0586 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TepRe1_0586 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TepRe1_0587 PF00483 Nucleotidyl transferase TepRe1_0587 PF01050 Mannose-6-phosphate isomerase TepRe1_0588 PF05651 Putative sugar diacid recognition TepRe1_0588 PF17853 GGDEF-like domain TepRe1_0588 PF13556 PucR C-terminal helix-turn-helix domain TepRe1_0589 PF17912 MalK OB fold domain TepRe1_0589 PF03459 TOBE domain TepRe1_0589 PF00005 ABC transporter TepRe1_0591 PF10502 Signal peptidase, peptidase S26 TepRe1_0593 PF01926 50S ribosome-binding GTPase TepRe1_0593 PF06071 Protein of unknown function (DUF933) TepRe1_0596 PF06971 Putative DNA-binding protein N-terminus TepRe1_0596 PF02629 CoA binding domain TepRe1_0598 PF01520 N-acetylmuramoyl-L-alanine amidase TepRe1_0599 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TepRe1_0601 PF01138 3' exoribonuclease family, domain 1 TepRe1_0601 PF03725 3' exoribonuclease family, domain 2 TepRe1_0602 PF01725 Ham1 family TepRe1_0604 PF05698 Bacterial trigger factor protein (TF) C-terminus TepRe1_0604 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TepRe1_0604 PF05697 Bacterial trigger factor protein (TF) TepRe1_0605 PF00574 Clp protease TepRe1_0606 PF06689 ClpX C4-type zinc finger TepRe1_0606 PF10431 C-terminal, D2-small domain, of ClpB protein TepRe1_0606 PF07724 AAA domain (Cdc48 subfamily) TepRe1_0607 PF00004 ATPase family associated with various cellular activities (AAA) TepRe1_0607 PF05362 Lon protease (S16) C-terminal proteolytic domain TepRe1_0608 PF01476 LysM domain TepRe1_0608 PF00704 Glycosyl hydrolases family 18 TepRe1_0610 PF01546 Peptidase family M20/M25/M40 TepRe1_0611 PF01371 Trp repressor protein TepRe1_0612 PF00580 UvrD/REP helicase N-terminal domain TepRe1_0612 PF13361 UvrD-like helicase C-terminal domain TepRe1_0613 PF12826 Helix-hairpin-helix motif TepRe1_0613 PF03119 NAD-dependent DNA ligase C4 zinc finger domain TepRe1_0613 PF03120 NAD-dependent DNA ligase OB-fold domain TepRe1_0613 PF01653 NAD-dependent DNA ligase adenylation domain TepRe1_0613 PF00533 BRCA1 C Terminus (BRCT) domain TepRe1_0615 PF00158 Sigma-54 interaction domain TepRe1_0615 PF03610 PTS system fructose IIA component TepRe1_0615 PF00874 PRD domain TepRe1_0617 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TepRe1_0618 PF03611 PTS system sugar-specific permease component TepRe1_0619 PF00107 Zinc-binding dehydrogenase TepRe1_0619 PF08240 Alcohol dehydrogenase GroES-like domain TepRe1_0620 PF08240 Alcohol dehydrogenase GroES-like domain TepRe1_0620 PF00107 Zinc-binding dehydrogenase TepRe1_0621 PF02796 Helix-turn-helix domain of resolvase TepRe1_0621 PF00239 Resolvase, N terminal domain TepRe1_0626 PF01883 Iron-sulfur cluster assembly protein TepRe1_0626 PF10609 NUBPL iron-transfer P-loop NTPase TepRe1_0627 PF00437 Type II/IV secretion system protein TepRe1_0636 PF04198 Putative sugar-binding domain TepRe1_0638 PF03608 PTS system enzyme II sorbitol-specific factor TepRe1_0639 PF07663 Sorbitol phosphotransferase enzyme II C-terminus TepRe1_0639 PF03612 Sorbitol phosphotransferase enzyme II N-terminus TepRe1_0642 PF00676 Dehydrogenase E1 component TepRe1_0643 PF02779 Transketolase, pyrimidine binding domain TepRe1_0643 PF02780 Transketolase, C-terminal domain TepRe1_0644 PF02817 e3 binding domain TepRe1_0644 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TepRe1_0644 PF00364 Biotin-requiring enzyme TepRe1_0645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TepRe1_0645 PF07992 Pyridine nucleotide-disulphide oxidoreductase TepRe1_0646 PF10415 Fumarase C C-terminus TepRe1_0646 PF00206 Lyase TepRe1_0647 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TepRe1_0647 PF03129 Anticodon binding domain TepRe1_0648 PF00356 Bacterial regulatory proteins, lacI family TepRe1_0649 PF13407 Periplasmic binding protein domain TepRe1_0650 PF00005 ABC transporter TepRe1_0651 PF02653 Branched-chain amino acid transport system / permease component TepRe1_0653 PF02633 Creatinine amidohydrolase TepRe1_0654 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TepRe1_0654 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TepRe1_0655 PF01261 Xylose isomerase-like TIM barrel TepRe1_0656 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TepRe1_0656 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TepRe1_0656 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TepRe1_0656 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TepRe1_0660 PF13393 Histidyl-tRNA synthetase TepRe1_0661 PF01634 ATP phosphoribosyltransferase TepRe1_0662 PF00155 Aminotransferase class I and II TepRe1_0664 PF00977 Histidine biosynthesis protein TepRe1_0665 PF00977 Histidine biosynthesis protein TepRe1_0666 PF01502 Phosphoribosyl-AMP cyclohydrolase TepRe1_0666 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase TepRe1_0668 PF04286 Protein of unknown function (DUF445) TepRe1_0668 PF04286 Protein of unknown function (DUF445) TepRe1_0669 PF03129 Anticodon binding domain TepRe1_0669 PF02824 TGS domain TepRe1_0669 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TepRe1_0669 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TepRe1_0670 PF05198 Translation initiation factor IF-3, N-terminal domain TepRe1_0670 PF00707 Translation initiation factor IF-3, C-terminal domain TepRe1_0671 PF01632 Ribosomal protein L35 TepRe1_0672 PF00453 Ribosomal protein L20 TepRe1_0673 PF02386 Cation transport protein TepRe1_0674 PF02080 TrkA-C domain TepRe1_0674 PF02254 TrkA-N domain TepRe1_0675 PF00588 SpoU rRNA Methylase family TepRe1_0675 PF08032 RNA 2'-O ribose methyltransferase substrate binding TepRe1_0677 PF01409 tRNA synthetases class II core domain (F) TepRe1_0677 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain TepRe1_0678 PF03147 Ferredoxin-fold anticodon binding domain TepRe1_0678 PF01588 Putative tRNA binding domain TepRe1_0678 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain TepRe1_0678 PF03484 tRNA synthetase B5 domain TepRe1_0678 PF03483 B3/4 domain TepRe1_0679 PF05164 Cell division protein ZapA TepRe1_0680 PF02811 PHP domain TepRe1_0680 PF14716 Helix-hairpin-helix domain TepRe1_0680 PF14791 DNA polymerase beta thumb TepRe1_0681 PF01713 Smr domain TepRe1_0681 PF00488 MutS domain V TepRe1_0683 PF00912 Transglycosylase TepRe1_0683 PF00905 Penicillin binding protein transpeptidase domain TepRe1_0684 PF00133 tRNA synthetases class I (I, L, M and V) TepRe1_0684 PF08264 Anticodon-binding domain of tRNA TepRe1_0688 PF00753 Metallo-beta-lactamase superfamily TepRe1_0689 PF01336 OB-fold nucleic acid binding domain TepRe1_0689 PF01966 HD domain TepRe1_0690 PF07475 HPr Serine kinase C-terminal domain TepRe1_0690 PF02603 HPr Serine kinase N terminus TepRe1_0691 PF10432 Bacterial phospho-glucose isomerase C-terminal SIS domain TepRe1_0691 PF01380 SIS domain TepRe1_0692 PF02811 PHP domain TepRe1_0693 PF01063 Amino-transferase class IV TepRe1_0695 PF01565 FAD binding domain TepRe1_0695 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain TepRe1_0696 PF01968 Hydantoinase/oxoprolinase TepRe1_0696 PF05378 Hydantoinase/oxoprolinase N-terminal region TepRe1_0697 PF00850 Histone deacetylase domain TepRe1_0700 PF03448 MgtE intracellular N domain TepRe1_0700 PF00571 CBS domain TepRe1_0700 PF01769 Divalent cation transporter TepRe1_0701 PF03448 MgtE intracellular N domain TepRe1_0701 PF00571 CBS domain TepRe1_0701 PF01769 Divalent cation transporter TepRe1_0702 PF06133 Control of competence regulator ComK, YlbF/YmcA TepRe1_0703 PF03668 P-loop ATPase protein family TepRe1_0704 PF01933 Uncharacterised protein family UPF0052 TepRe1_0705 PF10298 WhiA N-terminal LAGLIDADG-like domain TepRe1_0705 PF02650 WhiA C-terminal HTH domain TepRe1_0705 PF14527 WhiA LAGLIDADG-like domain TepRe1_0706 PF00381 PTS HPr component phosphorylation site TepRe1_0707 PF00571 CBS domain TepRe1_0707 PF03061 Thioesterase superfamily TepRe1_0707 PF00392 Bacterial regulatory proteins, gntR family TepRe1_0707 PF07085 DRTGG domain TepRe1_0708 PF01336 OB-fold nucleic acid binding domain TepRe1_0708 PF02811 PHP domain TepRe1_0708 PF14579 Helix-hairpin-helix motif TepRe1_0708 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TepRe1_0708 PF07733 Bacterial DNA polymerase III alpha NTPase domain TepRe1_0710 PF00365 Phosphofructokinase TepRe1_0711 PF02887 Pyruvate kinase, alpha/beta domain TepRe1_0711 PF00224 Pyruvate kinase, barrel domain TepRe1_0711 PF00391 PEP-utilising enzyme, mobile domain TepRe1_0712 PF13419 Haloacid dehalogenase-like hydrolase TepRe1_0714 PF02645 Uncharacterised protein, DegV family COG1307 TepRe1_0717 PF00356 Bacterial regulatory proteins, lacI family TepRe1_0718 PF13580 SIS domain TepRe1_0720 PF00294 pfkB family carbohydrate kinase TepRe1_0720 PF01467 Cytidylyltransferase-like TepRe1_0722 PF00005 ABC transporter TepRe1_0723 PF02653 Branched-chain amino acid transport system / permease component TepRe1_0724 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TepRe1_0724 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TepRe1_0725 PF01261 Xylose isomerase-like TIM barrel TepRe1_0726 PF01325 Iron dependent repressor, N-terminal DNA binding domain TepRe1_0726 PF00480 ROK family TepRe1_0727 PF14535 AMP-binding enzyme C-terminal domain TepRe1_0727 PF00501 AMP-binding enzyme TepRe1_0729 PF08353 Domain of unknown function (DUF1727) TepRe1_0729 PF08245 Mur ligase middle domain TepRe1_0730 PF07685 CobB/CobQ-like glutamine amidotransferase domain TepRe1_0733 PF08279 HTH domain TepRe1_0733 PF02829 3H domain TepRe1_0735 PF05504 Spore germination B3/ GerAC like, C-terminal TepRe1_0737 PF03323 Bacillus/Clostridium GerA spore germination protein TepRe1_0738 PF10437 Bacterial lipoate protein ligase C-terminus TepRe1_0738 PF03099 Biotin/lipoate A/B protein ligase family TepRe1_0739 PF02742 Iron dependent repressor, metal binding and dimerisation domain TepRe1_0739 PF01325 Iron dependent repressor, N-terminal DNA binding domain TepRe1_0741 PF17910 FeoB cytosolic helical domain TepRe1_0741 PF02421 Ferrous iron transport protein B TepRe1_0741 PF07670 Nucleoside recognition TepRe1_0741 PF07664 Ferrous iron transport protein B C terminus TepRe1_0742 PF00480 ROK family TepRe1_0743 PF00480 ROK family TepRe1_0744 PF01116 Fructose-bisphosphate aldolase class-II TepRe1_0745 PF10432 Bacterial phospho-glucose isomerase C-terminal SIS domain TepRe1_0745 PF01380 SIS domain TepRe1_0746 PF00294 pfkB family carbohydrate kinase TepRe1_0747 PF13407 Periplasmic binding protein domain TepRe1_0748 PF00005 ABC transporter TepRe1_0749 PF02653 Branched-chain amino acid transport system / permease component TepRe1_0750 PF02929 Beta galactosidase small chain TepRe1_0750 PF16353 Domain of unknown function(DUF4981) TepRe1_0750 PF02837 Glycosyl hydrolases family 2, sugar binding domain TepRe1_0750 PF00703 Glycosyl hydrolases family 2 TepRe1_0750 PF02836 Glycosyl hydrolases family 2, TIM barrel domain TepRe1_0751 PF00395 S-layer homology domain TepRe1_0751 PF00331 Glycosyl hydrolase family 10 TepRe1_0751 PF02018 Carbohydrate binding domain TepRe1_0751 PF06452 Carbohydrate family 9 binding domain-like TepRe1_0754 PF02525 Flavodoxin-like fold TepRe1_0759 PF04542 Sigma-70 region 2 TepRe1_0759 PF04545 Sigma-70, region 4 TepRe1_0768 PF00486 Transcriptional regulatory protein, C terminal TepRe1_0768 PF00072 Response regulator receiver domain TepRe1_0769 PF00512 His Kinase A (phospho-acceptor) domain TepRe1_0769 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TepRe1_0769 PF00672 HAMP domain TepRe1_0770 PF00291 Pyridoxal-phosphate dependent enzyme TepRe1_0771 PF01678 Diaminopimelate epimerase TepRe1_0772 PF00221 Aromatic amino acid lyase TepRe1_0773 PF00474 Sodium:solute symporter family TepRe1_0774 PF01175 Urocanase Rossmann-like domain TepRe1_0774 PF17391 Urocanase N-terminal domain TepRe1_0774 PF17392 Urocanase C-terminal domain TepRe1_0775 PF07837 Formiminotransferase domain, N-terminal subdomain TepRe1_0775 PF02971 Formiminotransferase domain TepRe1_0776 PF01979 Amidohydrolase family TepRe1_0777 PF04961 Formiminotransferase-cyclodeaminase TepRe1_0778 PF12822 ECF transporter, substrate-specific component TepRe1_0781 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TepRe1_0782 PF00528 Binding-protein-dependent transport system inner membrane component TepRe1_0783 PF12911 N-terminal TM domain of oligopeptide transport permease C TepRe1_0783 PF00528 Binding-protein-dependent transport system inner membrane component TepRe1_0784 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TepRe1_0784 PF00005 ABC transporter TepRe1_0785 PF00005 ABC transporter TepRe1_0785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TepRe1_0798 PF00005 ABC transporter TepRe1_0799 PF02659 Putative manganese efflux pump TepRe1_0800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TepRe1_0801 PF00072 Response regulator receiver domain TepRe1_0801 PF08664 YcbB domain TepRe1_0804 PF16868 NMT1-like family TepRe1_0805 PF04011 LemA family TepRe1_0807 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TepRe1_0807 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TepRe1_0807 PF02824 TGS domain TepRe1_0807 PF03129 Anticodon binding domain TepRe1_0808 PF00313 'Cold-shock' DNA-binding domain TepRe1_0809 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus TepRe1_0809 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein TepRe1_0818 PF07517 SecA DEAD-like domain TepRe1_0818 PF02810 SEC-C motif TepRe1_0818 PF01043 SecA preprotein cross-linking domain TepRe1_0818 PF07516 SecA Wing and Scaffold domain TepRe1_0820 PF02535 ZIP Zinc transporter TepRe1_0825 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TepRe1_0825 PF00460 Flagella basal body rod protein TepRe1_0826 PF00700 Bacterial flagellin C-terminal helical region TepRe1_0826 PF00669 Bacterial flagellin N-terminal helical region TepRe1_0828 PF02623 FliW protein TepRe1_0829 PF02599 Global regulator protein family TepRe1_0834 PF18273 Type III R-M EcoP15I C-terminal domain TepRe1_0834 PF01555 DNA methylase TepRe1_0835 PF04851 Type III restriction enzyme, res subunit TepRe1_0835 PF08774 VRR-NUC domain TepRe1_0836 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system TepRe1_0843 PF03787 RAMP superfamily TepRe1_0849 PF01926 50S ribosome-binding GTPase TepRe1_0849 PF06071 Protein of unknown function (DUF933) TepRe1_0855 PF00700 Bacterial flagellin C-terminal helical region TepRe1_0855 PF00669 Bacterial flagellin N-terminal helical region TepRe1_0857 PF07196 Flagellin hook IN motif TepRe1_0857 PF07195 Flagellar hook-associated protein 2 C-terminus TepRe1_0857 PF02465 Flagellar hook-associated protein 2 N-terminus TepRe1_0858 PF02561 Flagellar protein FliS TepRe1_0861 PF13426 PAS domain TepRe1_0861 PF00158 Sigma-54 interaction domain TepRe1_0861 PF02954 Bacterial regulatory protein, Fis family TepRe1_0862 PF01053 Cys/Met metabolism PLP-dependent enzyme TepRe1_0864 PF02811 PHP domain TepRe1_0865 PF00588 SpoU rRNA Methylase family TepRe1_0866 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TepRe1_0866 PF00672 HAMP domain TepRe1_0866 PF02743 Cache domain TepRe1_0867 PF05958 tRNA (Uracil-5-)-methyltransferase TepRe1_0867 PF01938 TRAM domain TepRe1_0869 PF05958 tRNA (Uracil-5-)-methyltransferase TepRe1_0869 PF01938 TRAM domain TepRe1_0871 PF13732 Domain of unknown function (DUF4162) TepRe1_0871 PF00005 ABC transporter TepRe1_0874 PF03193 RsgA GTPase TepRe1_0876 PF08241 Methyltransferase domain TepRe1_0876 PF13649 Methyltransferase domain TepRe1_0879 PF08291 Peptidase M15 TepRe1_0879 PF01471 Putative peptidoglycan binding domain TepRe1_0890 PF00005 ABC transporter TepRe1_0890 PF13732 Domain of unknown function (DUF4162) TepRe1_0892 PF12833 Helix-turn-helix domain TepRe1_0892 PF06445 GyrI-like small molecule binding domain TepRe1_0901 PF00486 Transcriptional regulatory protein, C terminal TepRe1_0901 PF00072 Response regulator receiver domain TepRe1_0902 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TepRe1_0902 PF00512 His Kinase A (phospho-acceptor) domain TepRe1_0903 PF00005 ABC transporter TepRe1_0903 PF13732 Domain of unknown function (DUF4162) TepRe1_0907 PF12848 ABC transporter TepRe1_0907 PF00005 ABC transporter TepRe1_0915 PF00072 Response regulator receiver domain TepRe1_0915 PF04397 LytTr DNA-binding domain TepRe1_0922 PF00872 Transposase, Mutator family TepRe1_0950 PF07969 Amidohydrolase family TepRe1_0951 PF02447 GntP family permease TepRe1_0952 PF00291 Pyridoxal-phosphate dependent enzyme TepRe1_0962 PF00486 Transcriptional regulatory protein, C terminal TepRe1_0962 PF00072 Response regulator receiver domain TepRe1_0963 PF00512 His Kinase A (phospho-acceptor) domain TepRe1_0963 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TepRe1_0964 PF00005 ABC transporter TepRe1_0967 PF00202 Aminotransferase class-III TepRe1_0968 PF01554 MatE TepRe1_0969 PF06725 3D domain TepRe1_0969 PF03990 G5-linked-Ubiquitin-like domain TepRe1_0969 PF07501 G5 domain TepRe1_0970 PF07943 Penicillin-binding protein 5, C-terminal domain TepRe1_0970 PF00768 D-alanyl-D-alanine carboxypeptidase TepRe1_0972 PF04239 Protein of unknown function (DUF421) TepRe1_0977 PF00271 Helicase conserved C-terminal domain TepRe1_0977 PF00270 DEAD/DEAH box helicase TepRe1_0977 PF09369 Domain of unknown function (DUF1998) TepRe1_0978 PF13482 RNase_H superfamily TepRe1_0980 PF12849 PBP superfamily domain TepRe1_0981 PF00528 Binding-protein-dependent transport system inner membrane component TepRe1_0982 PF00528 Binding-protein-dependent transport system inner membrane component TepRe1_0983 PF00072 Response regulator receiver domain TepRe1_0983 PF00486 Transcriptional regulatory protein, C terminal TepRe1_0984 PF16736 Single Cache-like TepRe1_0984 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TepRe1_0984 PF00989 PAS fold TepRe1_0984 PF00512 His Kinase A (phospho-acceptor) domain TepRe1_0985 PF00005 ABC transporter TepRe1_0986 PF01895 PhoU domain TepRe1_0987 PF00923 Transaldolase/Fructose-6-phosphate aldolase TepRe1_0988 PF03829 PTS system glucitol/sorbitol-specific IIA component TepRe1_0991 PF05524 PEP-utilising enzyme, N-terminal TepRe1_0991 PF00391 PEP-utilising enzyme, mobile domain TepRe1_0991 PF02896 PEP-utilising enzyme, TIM barrel domain TepRe1_0995 PF00005 ABC transporter TepRe1_0999 PF01497 Periplasmic binding protein TepRe1_1000 PF01032 FecCD transport family TepRe1_1001 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase TepRe1_1002 PF00288 GHMP kinases N terminal domain TepRe1_1003 PF00155 Aminotransferase class I and II TepRe1_1004 PF03186 CobD/Cbib protein TepRe1_1005 PF02654 Cobalamin-5-phosphate synthase TepRe1_1006 PF00300 Histidine phosphatase superfamily (branch 1) TepRe1_1007 PF01106 NifU-like domain TepRe1_1011 PF08281 Sigma-70, region 4 TepRe1_1011 PF04542 Sigma-70 region 2 TepRe1_1012 PF11738 Protein of unknown function (DUF3298) TepRe1_1012 PF13739 Deacetylase PdaC TepRe1_1015 PF05569 BlaR1 peptidase M56 TepRe1_1015 PF00905 Penicillin binding protein transpeptidase domain TepRe1_1017 PF01476 LysM domain TepRe1_1017 PF01520 N-acetylmuramoyl-L-alanine amidase TepRe1_1018 PF08206 Ribonuclease B OB domain TepRe1_1018 PF17876 Cold shock domain TepRe1_1018 PF00773 RNB domain TepRe1_1018 PF00575 S1 RNA binding domain TepRe1_1021 PF01381 Helix-turn-helix TepRe1_1031 PF00772 DnaB-like helicase N terminal domain TepRe1_1031 PF03796 DnaB-like helicase C terminal domain TepRe1_1035 PF04025 Domain of unknown function (DUF370) TepRe1_1036 PF00436 Single-strand binding protein family TepRe1_1045 PF10668 Phage terminase small subunit TepRe1_1046 PF17288 Terminase RNAseH like domain TepRe1_1046 PF04466 Phage terminase large subunit TepRe1_1065 PF02899 Phage integrase, N-terminal SAM-like domain TepRe1_1065 PF00589 Phage integrase family TepRe1_1067 PF01668 SmpB protein TepRe1_1068 PF01170 Putative RNA methylase family UPF0020 TepRe1_1068 PF02926 THUMP domain TepRe1_1069 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain TepRe1_1069 PF00753 Metallo-beta-lactamase superfamily TepRe1_1069 PF10996 Beta-Casp domain TepRe1_1070 PF14098 Small, acid-soluble spore protein I TepRe1_1071 PF01569 PAP2 superfamily TepRe1_1072 PF00155 Aminotransferase class I and II TepRe1_1073 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase TepRe1_1075 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain TepRe1_1075 PF02769 AIR synthase related protein, C-terminal domain TepRe1_1075 PF00586 AIR synthase related protein, N-terminal domain TepRe1_1076 PF00156 Phosphoribosyl transferase domain TepRe1_1077 PF00586 AIR synthase related protein, N-terminal domain TepRe1_1077 PF02769 AIR synthase related protein, C-terminal domain TepRe1_1078 PF00551 Formyl transferase TepRe1_1079 PF01808 AICARFT/IMPCHase bienzyme TepRe1_1079 PF02142 MGS-like domain TepRe1_1080 PF02843 Phosphoribosylglycinamide synthetase, C domain TepRe1_1080 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain TepRe1_1080 PF02844 Phosphoribosylglycinamide synthetase, N domain TepRe1_1081 PF02915 Rubrerythrin TepRe1_1082 PF01113 Dihydrodipicolinate reductase, N-terminus TepRe1_1082 PF05173 Dihydrodipicolinate reductase, C-terminus TepRe1_1084 PF02277 Phosphoribosyltransferase TepRe1_1085 PF00753 Metallo-beta-lactamase superfamily TepRe1_1085 PF03772 Competence protein TepRe1_1085 PF13567 Domain of unknown function (DUF4131) TepRe1_1086 PF06144 DNA polymerase III, delta subunit TepRe1_1087 PF01649 Ribosomal protein S20 TepRe1_1089 PF03418 Germination protease TepRe1_1092 PF03144 Elongation factor Tu domain 2 TepRe1_1092 PF00009 Elongation factor Tu GTP binding domain TepRe1_1092 PF00679 Elongation factor G C-terminus TepRe1_1092 PF06421 GTP-binding protein LepA C-terminus TepRe1_1092 PF14492 Elongation Factor G, domain II TepRe1_1093 PF06969 HemN C-terminal domain TepRe1_1093 PF04055 Radical SAM superfamily TepRe1_1094 PF01628 HrcA protein C terminal domain TepRe1_1095 PF00118 TCP-1/cpn60 chaperonin family TepRe1_1097 PF00012 Hsp70 protein TepRe1_1098 PF00226 DnaJ domain TepRe1_1098 PF01556 DnaJ C terminal domain TepRe1_1098 PF00684 DnaJ central domain TepRe1_1100 PF04452 RNA methyltransferase TepRe1_1101 PF01938 TRAM domain TepRe1_1101 PF00919 Uncharacterized protein family UPF0004 TepRe1_1101 PF04055 Radical SAM superfamily TepRe1_1102 PF01230 HIT domain TepRe1_1103 PF01165 Ribosomal protein S21 TepRe1_1104 PF09424 Yqey-like protein TepRe1_1105 PF01957 NfeD-like C-terminal, partner-binding TepRe1_1105 PF01972 Serine dehydrogenase proteinase TepRe1_1106 PF12127 SigmaW regulon antibacterial TepRe1_1108 PF07873 YabP family TepRe1_1110 PF02562 PhoH-like protein TepRe1_1111 PF07698 7TM receptor with intracellular HD hydrolase TepRe1_1111 PF01966 HD domain TepRe1_1111 PF07697 7TM-HD extracellular TepRe1_1112 PF02130 Uncharacterized protein family UPF0054 TepRe1_1113 PF01219 Prokaryotic diacylglycerol kinase TepRe1_1114 PF11258 Protein of unknown function (DUF3048) N-terminal domain TepRe1_1114 PF17479 Protein of unknown function (DUF3048) C-terminal domain TepRe1_1115 PF11967 Recombination protein O N terminal TepRe1_1115 PF02565 Recombination protein O C terminal TepRe1_1116 PF08279 HTH domain TepRe1_1116 PF00571 CBS domain TepRe1_1117 PF03618 Kinase/pyrophosphorylase TepRe1_1118 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TepRe1_1118 PF02896 PEP-utilising enzyme, TIM barrel domain TepRe1_1118 PF00391 PEP-utilising enzyme, mobile domain TepRe1_1119 PF01966 HD domain TepRe1_1119 PF13286 Phosphohydrolase-associated domain TepRe1_1120 PF08275 DNA primase catalytic core, N-terminal domain TepRe1_1120 PF01807 CHC2 zinc finger TepRe1_1120 PF10410 DnaB-helicase binding domain of primase TepRe1_1121 PF04542 Sigma-70 region 2 TepRe1_1121 PF04539 Sigma-70 region 3 TepRe1_1121 PF04545 Sigma-70, region 4 TepRe1_1121 PF00140 Sigma-70 factor, region 1.2 TepRe1_1121 PF03979 Sigma-70 factor, region 1.1 TepRe1_1123 PF01784 NIF3 (NGG1p interacting factor 3) TepRe1_1125 PF00075 RNase H TepRe1_1126 PF01814 Hemerythrin HHE cation binding domain TepRe1_1129 PF05193 Peptidase M16 inactive domain TepRe1_1130 PF05193 Peptidase M16 inactive domain TepRe1_1130 PF00675 Insulinase (Peptidase family M16) TepRe1_1131 PF02381 MraZ protein, putative antitoxin-like TepRe1_1133 PF04977 Septum formation initiator TepRe1_1134 PF03793 PASTA domain TepRe1_1134 PF03717 Penicillin-binding Protein dimerisation domain TepRe1_1134 PF00905 Penicillin binding protein transpeptidase domain TepRe1_1135 PF01225 Mur ligase family, catalytic domain TepRe1_1135 PF02875 Mur ligase family, glutamate ligase domain TepRe1_1135 PF08245 Mur ligase middle domain TepRe1_1136 PF01225 Mur ligase family, catalytic domain TepRe1_1136 PF02875 Mur ligase family, glutamate ligase domain TepRe1_1136 PF08245 Mur ligase middle domain TepRe1_1137 PF00953 Glycosyl transferase family 4 TepRe1_1137 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 TepRe1_1138 PF02875 Mur ligase family, glutamate ligase domain TepRe1_1138 PF08245 Mur ligase middle domain TepRe1_1139 PF01098 Cell cycle protein TepRe1_1140 PF04101 Glycosyltransferase family 28 C-terminal domain TepRe1_1140 PF03033 Glycosyltransferase family 28 N-terminal domain TepRe1_1141 PF01225 Mur ligase family, catalytic domain TepRe1_1141 PF02875 Mur ligase family, glutamate ligase domain TepRe1_1141 PF08245 Mur ligase middle domain TepRe1_1142 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TepRe1_1144 PF05949 Bacterial protein of unknown function (DUF881) TepRe1_1145 PF06947 Protein of unknown function (DUF1290) TepRe1_1146 PF02491 SHS2 domain inserted in FTSA TepRe1_1147 PF12327 FtsZ family, C-terminal domain TepRe1_1147 PF00091 Tubulin/FtsZ family, GTPase domain TepRe1_1148 PF03419 Sporulation factor SpoIIGA TepRe1_1149 PF04545 Sigma-70, region 4 TepRe1_1149 PF04542 Sigma-70 region 2 TepRe1_1150 PF04545 Sigma-70, region 4 TepRe1_1150 PF04539 Sigma-70 region 3 TepRe1_1150 PF04542 Sigma-70 region 2 TepRe1_1152 PF05239 PRC-barrel domain TepRe1_1153 PF03477 ATP cone domain TepRe1_1154 PF00919 Uncharacterized protein family UPF0004 TepRe1_1154 PF18693 TRAM domain TepRe1_1154 PF04055 Radical SAM superfamily TepRe1_1160 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TepRe1_1160 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus TepRe1_1161 PF09547 Stage IV sporulation protein A (spore_IV_A) TepRe1_1162 PF00708 Acylphosphatase TepRe1_1163 PF12002 MgsA AAA+ ATPase C terminal TepRe1_1163 PF16193 AAA C-terminal domain TepRe1_1163 PF00004 ATPase family associated with various cellular activities (AAA) TepRe1_1164 PF01339 CheB methylesterase TepRe1_1164 PF00072 Response regulator receiver domain TepRe1_1165 PF03576 Peptidase family S58 TepRe1_1167 PF01471 Putative peptidoglycan binding domain TepRe1_1167 PF07486 Cell Wall Hydrolase TepRe1_1168 PF01205 Uncharacterized protein family UPF0029 TepRe1_1168 PF09186 Domain of unknown function (DUF1949) TepRe1_1169 PF02540 NAD synthase TepRe1_1170 PF01709 Transcriptional regulator TepRe1_1173 PF07499 RuvA, C-terminal domain TepRe1_1173 PF01330 RuvA N terminal domain TepRe1_1174 PF17864 RuvB AAA lid domain TepRe1_1174 PF05491 RuvB C-terminal winged helix domain TepRe1_1174 PF05496 Holliday junction DNA helicase RuvB P-loop domain TepRe1_1175 PF08486 Stage II sporulation protein TepRe1_1176 PF02547 Queuosine biosynthesis protein TepRe1_1179 PF02699 Preprotein translocase subunit TepRe1_1182 PF07549 SecD/SecF GG Motif TepRe1_1182 PF02355 Protein export membrane protein TepRe1_1183 PF07549 SecD/SecF GG Motif TepRe1_1183 PF02355 Protein export membrane protein TepRe1_1185 PF03061 Thioesterase superfamily TepRe1_1186 PF02504 Fatty acid synthesis protein TepRe1_1187 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TepRe1_1187 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TepRe1_1188 PF03060 Nitronate monooxygenase TepRe1_1189 PF00698 Acyl transferase domain TepRe1_1191 PF00550 Phosphopantetheine attachment site TepRe1_1192 PF02801 Beta-ketoacyl synthase, C-terminal domain TepRe1_1192 PF00109 Beta-ketoacyl synthase, N-terminal domain TepRe1_1193 PF14622 Ribonuclease-III-like TepRe1_1193 PF00035 Double-stranded RNA binding motif TepRe1_1194 PF04232 Stage V sporulation protein S (SpoVS) TepRe1_1195 PF02463 RecF/RecN/SMC N terminal domain TepRe1_1195 PF06470 SMC proteins Flexible Hinge Domain TepRe1_1196 PF02881 SRP54-type protein, helical bundle domain TepRe1_1196 PF00448 SRP54-type protein, GTPase domain TepRe1_1197 PF04297 Putative helix-turn-helix protein, YlxM / p13 like TepRe1_1198 PF00448 SRP54-type protein, GTPase domain TepRe1_1198 PF02881 SRP54-type protein, helical bundle domain TepRe1_1198 PF02978 Signal peptide binding domain TepRe1_1199 PF00886 Ribosomal protein S16 TepRe1_1202 PF01746 tRNA (Guanine-1)-methyltransferase TepRe1_1203 PF01245 Ribosomal protein L19 TepRe1_1204 PF01926 50S ribosome-binding GTPase TepRe1_1205 PF01351 Ribonuclease HII TepRe1_1206 PF02021 Uncharacterised protein family UPF0102 TepRe1_1207 PF13335 Magnesium chelatase, subunit ChlI C-terminal TepRe1_1207 PF01078 Magnesium chelatase, subunit ChlI TepRe1_1208 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP TepRe1_1208 PF12557 Cob(I)alamin adenosyltransferase N terminal TepRe1_1209 PF17782 DprA winged helix domain TepRe1_1209 PF02481 DNA recombination-mediator protein A TepRe1_1210 PF01131 DNA topoisomerase TepRe1_1210 PF01396 Topoisomerase DNA binding C4 zinc finger TepRe1_1210 PF01751 Toprim domain TepRe1_1211 PF01134 Glucose inhibited division protein A TepRe1_1212 PF00589 Phage integrase family TepRe1_1212 PF02899 Phage integrase, N-terminal SAM-like domain TepRe1_1213 PF00227 Proteasome subunit TepRe1_1214 PF00004 ATPase family associated with various cellular activities (AAA) TepRe1_1214 PF07724 AAA domain (Cdc48 subfamily) TepRe1_1214 PF10431 C-terminal, D2-small domain, of ClpB protein TepRe1_1215 PF08222 CodY helix-turn-helix domain TepRe1_1215 PF06018 CodY GAF-like domain TepRe1_1216 PF00460 Flagella basal body rod protein TepRe1_1217 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TepRe1_1217 PF00460 Flagella basal body rod protein TepRe1_1218 PF02049 Flagellar hook-basal body complex protein FliE TepRe1_1219 PF01514 Secretory protein of YscJ/FliF family TepRe1_1219 PF08345 Flagellar M-ring protein C-terminal TepRe1_1220 PF14842 FliG N-terminal domain TepRe1_1220 PF14841 FliG middle domain TepRe1_1220 PF01706 FliG C-terminal domain TepRe1_1222 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TepRe1_1222 PF18269 T3SS EscN ATPase C-terminal domain TepRe1_1222 PF02874 ATP synthase alpha/beta family, beta-barrel domain TepRe1_1226 PF03963 Flagellar hook capping protein - N-terminal region TepRe1_1228 PF07559 Flagellar basal body protein FlaE TepRe1_1228 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TepRe1_1228 PF00460 Flagella basal body rod protein TepRe1_1230 PF01618 MotA/TolQ/ExbB proton channel family TepRe1_1231 PF00691 OmpA family TepRe1_1231 PF13677 Membrane MotB of proton-channel complex MotA/MotB TepRe1_1233 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TepRe1_1233 PF02154 Flagellar motor switch protein FliM TepRe1_1234 PF04509 CheC-like family TepRe1_1234 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TepRe1_1235 PF00072 Response regulator receiver domain TepRe1_1237 PF00813 FliP family TepRe1_1238 PF01313 Bacterial export proteins, family 3 TepRe1_1239 PF01311 Bacterial export proteins, family 1 TepRe1_1240 PF01312 FlhB HrpN YscU SpaS Family TepRe1_1241 PF00771 FHIPEP family TepRe1_1242 PF00448 SRP54-type protein, GTPase domain TepRe1_1243 PF10609 NUBPL iron-transfer P-loop NTPase TepRe1_1245 PF01584 CheW-like domain TepRe1_1245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TepRe1_1245 PF01627 Hpt domain TepRe1_1245 PF07194 P2 response regulator binding domain TepRe1_1245 PF02895 Signal transducing histidine kinase, homodimeric domain TepRe1_1246 PF01584 CheW-like domain TepRe1_1247 PF04509 CheC-like family TepRe1_1248 PF03975 CheD chemotactic sensory transduction TepRe1_1249 PF04545 Sigma-70, region 4 TepRe1_1249 PF04539 Sigma-70 region 3 TepRe1_1249 PF04542 Sigma-70 region 2 TepRe1_1253 PF01594 AI-2E family transporter TepRe1_1254 PF00318 Ribosomal protein S2 TepRe1_1255 PF00889 Elongation factor TS TepRe1_1256 PF00696 Amino acid kinase family TepRe1_1257 PF01765 Ribosome recycling factor TepRe1_1258 PF01255 Putative undecaprenyl diphosphate synthase TepRe1_1260 PF01594 AI-2E family transporter TepRe1_1261 PF02163 Peptidase family M50 TepRe1_1261 PF17820 PDZ domain TepRe1_1262 PF04551 GcpE protein TepRe1_1263 PF09180 Prolyl-tRNA synthetase, C-terminal TepRe1_1263 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TepRe1_1263 PF03129 Anticodon binding domain TepRe1_1264 PF00535 Glycosyl transferase family 2 TepRe1_1265 PF14579 Helix-hairpin-helix motif TepRe1_1265 PF11490 DNA polymerase III polC-type N-terminus II TepRe1_1265 PF07733 Bacterial DNA polymerase III alpha NTPase domain TepRe1_1265 PF00929 Exonuclease TepRe1_1265 PF02811 PHP domain TepRe1_1265 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TepRe1_1267 PF00575 S1 RNA binding domain TepRe1_1267 PF13184 NusA-like KH domain TepRe1_1267 PF08529 NusA N-terminal domain TepRe1_1268 PF04296 Protein of unknown function (DUF448) TepRe1_1269 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family TepRe1_1270 PF00009 Elongation factor Tu GTP binding domain TepRe1_1270 PF11987 Translation-initiation factor 2 TepRe1_1270 PF04760 Translation initiation factor IF-2, N-terminal region TepRe1_1271 PF02033 Ribosome-binding factor A TepRe1_1272 PF02272 DHHA1 domain TepRe1_1272 PF01368 DHH family TepRe1_1273 PF16198 tRNA pseudouridylate synthase B C-terminal domain TepRe1_1273 PF01509 TruB family pseudouridylate synthase (N terminal domain) TepRe1_1274 PF01687 Riboflavin kinase TepRe1_1274 PF06574 FAD synthetase TepRe1_1275 PF00312 Ribosomal protein S15 TepRe1_1276 PF00013 KH domain TepRe1_1276 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain TepRe1_1276 PF01138 3' exoribonuclease family, domain 1 TepRe1_1276 PF03725 3' exoribonuclease family, domain 2 TepRe1_1276 PF00575 S1 RNA binding domain TepRe1_1277 PF11738 Protein of unknown function (DUF3298) TepRe1_1277 PF13739 Deacetylase PdaC TepRe1_1277 PF01522 Polysaccharide deacetylase TepRe1_1278 PF00842 Alanine racemase, C-terminal domain TepRe1_1278 PF01168 Alanine racemase, N-terminal domain TepRe1_1279 PF00692 dUTPase TepRe1_1280 PF05239 PRC-barrel domain TepRe1_1281 PF17770 Ribonuclease J C-terminal domain TepRe1_1281 PF00753 Metallo-beta-lactamase superfamily TepRe1_1281 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain TepRe1_1282 PF00574 Clp protease TepRe1_1284 PF01580 FtsK/SpoIIIE family TepRe1_1284 PF13491 4TM region of DNA translocase FtsK/SpoIIIE TepRe1_1284 PF17854 FtsK alpha domain TepRe1_1284 PF09397 Ftsk gamma domain TepRe1_1285 PF13464 Domain of unknown function (DUF4115) TepRe1_1286 PF00919 Uncharacterized protein family UPF0004 TepRe1_1286 PF18693 TRAM domain TepRe1_1286 PF04055 Radical SAM superfamily TepRe1_1288 PF00004 ATPase family associated with various cellular activities (AAA) TepRe1_1288 PF17862 AAA+ lid domain TepRe1_1288 PF01434 Peptidase family M41 TepRe1_1290 PF02834 LigT like Phosphoesterase TepRe1_1291 PF00154 recA bacterial DNA recombination protein TepRe1_1293 PF02463 RecF/RecN/SMC N terminal domain TepRe1_1293 PF06470 SMC proteins Flexible Hinge Domain TepRe1_1296 PF01966 HD domain TepRe1_1296 PF00013 KH domain TepRe1_1296 PF12072 Domain of unknown function (DUF3552) TepRe1_1297 PF13277 YmdB-like protein TepRe1_1298 PF04232 Stage V sporulation protein S (SpoVS) TepRe1_1299 PF02811 PHP domain TepRe1_1301 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase TepRe1_1301 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II TepRe1_1301 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TepRe1_1302 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TepRe1_1304 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TepRe1_1304 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TepRe1_1306 PF02310 B12 binding domain TepRe1_1306 PF01642 Methylmalonyl-CoA mutase TepRe1_1309 PF01039 Carboxyl transferase domain TepRe1_1311 PF00364 Biotin-requiring enzyme TepRe1_1312 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit TepRe1_1313 PF00682 HMGL-like TepRe1_1313 PF02436 Conserved carboxylase domain TepRe1_1313 PF00364 Biotin-requiring enzyme TepRe1_1315 PF04294 VanW like protein TepRe1_1318 PF03167 Uracil DNA glycosylase superfamily TepRe1_1319 PF04055 Radical SAM superfamily TepRe1_1319 PF01938 TRAM domain TepRe1_1319 PF00919 Uncharacterized protein family UPF0004 TepRe1_1321 PF01119 DNA mismatch repair protein, C-terminal domain TepRe1_1321 PF08676 MutL C terminal dimerisation domain TepRe1_1323 PF17209 Hfq protein TepRe1_1324 PF17866 AAA lid domain TepRe1_1324 PF00004 ATPase family associated with various cellular activities (AAA) TepRe1_1325 PF01926 50S ribosome-binding GTPase TepRe1_1325 PF01018 GTP1/OBG TepRe1_1325 PF09269 Domain of unknown function (DUF1967) TepRe1_1328 PF06838 Methionine gamma-lyase TepRe1_1329 PF01726 LexA DNA binding domain TepRe1_1329 PF00717 Peptidase S24-like TepRe1_1330 PF00155 Aminotransferase class I and II TepRe1_1332 PF14084 Protein of unknown function (DUF4264) TepRe1_1333 PF01975 Survival protein SurE TepRe1_1339 PF03705 CheR methyltransferase, all-alpha domain TepRe1_1339 PF01739 CheR methyltransferase, SAM binding domain TepRe1_1341 PF01070 FMN-dependent dehydrogenase TepRe1_1342 PF02401 LytB protein TepRe1_1342 PF00575 S1 RNA binding domain TepRe1_1344 PF02224 Cytidylate kinase TepRe1_1347 PF00005 ABC transporter TepRe1_1348 PF00491 Arginase family TepRe1_1349 PF17284 Spermidine synthase tetramerisation domain TepRe1_1351 PF00849 RNA pseudouridylate synthase TepRe1_1351 PF01479 S4 domain TepRe1_1354 PF02310 B12 binding domain TepRe1_1354 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase TepRe1_1357 PF13932 GidA associated domain TepRe1_1357 PF01134 Glucose inhibited division protein A TepRe1_1358 PF12390 Selenocysteine synthase N terminal TepRe1_1358 PF03841 L-seryl-tRNA selenium transferase TepRe1_1361 PF09579 Sporulation protein YtfJ (Spore_YtfJ) TepRe1_1363 PF04079 Segregation and condensation complex subunit ScpB TepRe1_1364 PF02616 Segregation and condensation protein ScpA TepRe1_1365 PF00579 tRNA synthetases class I (W and Y) TepRe1_1366 PF02163 Peptidase family M50 TepRe1_1367 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TepRe1_1367 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TepRe1_1368 PF01869 BadF/BadG/BcrA/BcrD ATPase family TepRe1_1372 PF03862 SpoVAC/SpoVAEB sporulation membrane protein TepRe1_1373 PF07451 Stage V sporulation protein AD (SpoVAD) TepRe1_1374 PF03862 SpoVAC/SpoVAEB sporulation membrane protein TepRe1_1375 PF07311 Dodecin TepRe1_1377 PF04542 Sigma-70 region 2 TepRe1_1377 PF04545 Sigma-70, region 4 TepRe1_1377 PF04539 Sigma-70 region 3 TepRe1_1378 PF13581 Histidine kinase-like ATPase domain TepRe1_1379 PF01740 STAS domain TepRe1_1380 PF00768 D-alanyl-D-alanine carboxypeptidase TepRe1_1380 PF07943 Penicillin-binding protein 5, C-terminal domain TepRe1_1381 PF02899 Phage integrase, N-terminal SAM-like domain TepRe1_1381 PF00589 Phage integrase family TepRe1_1382 PF01944 Stage II sporulation protein M TepRe1_1384 PF00293 NUDIX domain TepRe1_1385 PF00072 Response regulator receiver domain TepRe1_1385 PF08769 Sporulation initiation factor Spo0A C terminal TepRe1_1386 PF05580 SpoIVB peptidase S55 TepRe1_1386 PF17820 PDZ domain TepRe1_1387 PF13476 AAA domain TepRe1_1388 PF01316 Arginine repressor, DNA binding domain TepRe1_1388 PF02863 Arginine repressor, C-terminal domain TepRe1_1389 PF01513 ATP-NAD kinase TepRe1_1391 PF01479 S4 domain TepRe1_1391 PF01728 FtsJ-like methyltransferase TepRe1_1393 PF00348 Polyprenyl synthetase TepRe1_1394 PF02609 Exonuclease VII small subunit TepRe1_1395 PF02601 Exonuclease VII, large subunit TepRe1_1395 PF13742 OB-fold nucleic acid binding domain TepRe1_1396 PF01029 NusB family TepRe1_1399 PF03780 Asp23 family, cell envelope-related function TepRe1_1403 PF09546 Stage III sporulation protein AE (spore_III_AE) TepRe1_1404 PF06686 Stage III sporulation protein AC/AD protein family TepRe1_1405 PF06686 Stage III sporulation protein AC/AD protein family TepRe1_1409 PF01132 Elongation factor P (EF-P) OB domain TepRe1_1409 PF08207 Elongation factor P (EF-P) KOW-like domain TepRe1_1409 PF09285 Elongation factor P, C-terminal TepRe1_1410 PF01321 Creatinase/Prolidase N-terminal domain TepRe1_1410 PF00557 Metallopeptidase family M24 TepRe1_1417 PF00114 Pilin (bacterial filament) TepRe1_1417 PF07963 Prokaryotic N-terminal methylation motif TepRe1_1418 PF00482 Type II secretion system (T2SS), protein F TepRe1_1419 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain TepRe1_1419 PF00437 Type II/IV secretion system protein TepRe1_1421 PF04542 Sigma-70 region 2 TepRe1_1421 PF04545 Sigma-70, region 4 TepRe1_1422 PF03717 Penicillin-binding Protein dimerisation domain TepRe1_1422 PF00905 Penicillin binding protein transpeptidase domain TepRe1_1422 PF03793 PASTA domain TepRe1_1423 PF02618 YceG-like family TepRe1_1425 PF00690 Cation transporter/ATPase, N-terminus TepRe1_1425 PF00689 Cation transporting ATPase, C-terminus TepRe1_1426 PF01475 Ferric uptake regulator family TepRe1_1427 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TepRe1_1427 PF01842 ACT domain TepRe1_1427 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TepRe1_1428 PF06949 Protein of unknown function (DUF1292) TepRe1_1429 PF03652 Holliday junction resolvase TepRe1_1430 PF00248 Aldo/keto reductase family TepRe1_1431 PF06135 IreB regulatory phosphoprotein TepRe1_1432 PF02272 DHHA1 domain TepRe1_1432 PF01411 tRNA synthetases class II (A) TepRe1_1432 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TepRe1_1434 PF00899 ThiF family TepRe1_1435 PF01336 OB-fold nucleic acid binding domain TepRe1_1435 PF00152 tRNA synthetases class II (D, K and N) TepRe1_1435 PF02938 GAD domain TepRe1_1436 PF13180 PDZ domain TepRe1_1436 PF17820 PDZ domain TepRe1_1438 PF00753 Metallo-beta-lactamase superfamily TepRe1_1439 PF02580 D-Tyr-tRNA(Tyr) deacylase TepRe1_1440 PF04607 Region found in RelA / SpoT proteins TepRe1_1440 PF02824 TGS domain TepRe1_1440 PF13291 ACT domain TepRe1_1441 PF00156 Phosphoribosyl transferase domain TepRe1_1442 PF01368 DHH family TepRe1_1442 PF17768 RecJ OB domain TepRe1_1442 PF02272 DHHA1 domain TepRe1_1442 PF10141 Single-strand DNA-specific exonuclease, C terminal domain TepRe1_1444 PF17863 AAA lid domain TepRe1_1444 PF01078 Magnesium chelatase, subunit ChlI TepRe1_1445 PF01783 Ribosomal L32p protein family TepRe1_1447 PF00871 Acetokinase family TepRe1_1448 PF01515 Phosphate acetyl/butaryl transferase TepRe1_1449 PF05636 HIGH Nucleotidyl Transferase TepRe1_1450 PF05362 Lon protease (S16) C-terminal proteolytic domain TepRe1_1450 PF13180 PDZ domain TepRe1_1451 PF07670 Nucleoside recognition TepRe1_1453 PF01467 Cytidylyltransferase-like TepRe1_1455 PF00269 Small, acid-soluble spore proteins, alpha/beta type TepRe1_1456 PF00270 DEAD/DEAH box helicase TepRe1_1456 PF00271 Helicase conserved C-terminal domain TepRe1_1456 PF17191 RecG wedge domain TepRe1_1457 PF13684 Dihydroxyacetone kinase family TepRe1_1457 PF02734 DAK2 domain TepRe1_1458 PF03780 Asp23 family, cell envelope-related function TepRe1_1459 PF00830 Ribosomal L28 family TepRe1_1461 PF00834 Ribulose-phosphate 3 epimerase family TepRe1_1462 PF00069 Protein kinase domain TepRe1_1462 PF03793 PASTA domain TepRe1_1464 PF04055 Radical SAM superfamily TepRe1_1465 PF01189 16S rRNA methyltransferase RsmB/F TepRe1_1465 PF01029 NusB family TepRe1_1467 PF00551 Formyl transferase TepRe1_1467 PF02911 Formyl transferase, C-terminal domain TepRe1_1468 PF01327 Polypeptide deformylase TepRe1_1469 PF17764 3′ DNA-binding domain (3′BD) TepRe1_1469 PF18074 Primosomal protein N C-terminal domain TepRe1_1469 PF04851 Type III restriction enzyme, res subunit TepRe1_1469 PF00271 Helicase conserved C-terminal domain TepRe1_1469 PF18319 PriA DNA helicase Cys-rich region (CRR) domain TepRe1_1470 PF04127 DNA / pantothenate metabolism flavoprotein TepRe1_1470 PF02441 Flavoprotein TepRe1_1472 PF00625 Guanylate kinase TepRe1_1473 PF04025 Domain of unknown function (DUF370) TepRe1_1474 PF03755 YicC-like family, N-terminal region TepRe1_1474 PF08340 Domain of unknown function (DUF1732) TepRe1_1476 PF00156 Phosphoribosyl transferase domain TepRe1_1477 PF00849 RNA pseudouridylate synthase TepRe1_1477 PF01479 S4 domain TepRe1_1478 PF01252 Signal peptidase (SPase) II TepRe1_1479 PF01258 Prokaryotic dksA/traR C4-type zinc finger TepRe1_1481 PF05103 DivIVA protein TepRe1_1483 PF04472 Cell division protein SepF TepRe1_1484 PF01168 Alanine racemase, N-terminal domain TepRe1_1486 PF00288 GHMP kinases N terminal domain TepRe1_1486 PF08544 GHMP kinases C terminal TepRe1_1487 PF00291 Pyridoxal-phosphate dependent enzyme TepRe1_1488 PF03447 Homoserine dehydrogenase, NAD binding domain TepRe1_1488 PF01842 ACT domain TepRe1_1488 PF00742 Homoserine dehydrogenase TepRe1_1490 PF07187 Protein of unknown function (DUF1405) TepRe1_1491 PF00633 Helix-hairpin-helix motif TepRe1_1491 PF00730 HhH-GPD superfamily base excision DNA repair protein TepRe1_1491 PF10576 Iron-sulfur binding domain of endonuclease III TepRe1_1492 PF01471 Putative peptidoglycan binding domain TepRe1_1492 PF03572 Peptidase family S41 TepRe1_1492 PF17820 PDZ domain TepRe1_1493 PF03060 Nitronate monooxygenase TepRe1_1494 PF00348 Polyprenyl synthetase TepRe1_1495 PF00005 ABC transporter TepRe1_1497 PF12704 MacB-like periplasmic core domain TepRe1_1497 PF00005 ABC transporter TepRe1_1497 PF02687 FtsX-like permease family TepRe1_1499 PF02875 Mur ligase family, glutamate ligase domain TepRe1_1499 PF08245 Mur ligase middle domain TepRe1_1500 PF10458 Valyl tRNA synthetase tRNA binding arm TepRe1_1500 PF00133 tRNA synthetases class I (I, L, M and V) TepRe1_1500 PF08264 Anticodon-binding domain of tRNA TepRe1_1501 PF02673 Bacitracin resistance protein BacA TepRe1_1502 PF07690 Major Facilitator Superfamily TepRe1_1504 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TepRe1_1504 PF07685 CobB/CobQ-like glutamine amidotransferase domain TepRe1_1505 PF01458 Uncharacterized protein family (UPF0051) TepRe1_1506 PF00005 ABC transporter TepRe1_1506 PF12399 Branched-chain amino acid ATP-binding cassette transporter TepRe1_1508 PF13603 Leucyl-tRNA synthetase, Domain 2 TepRe1_1508 PF00133 tRNA synthetases class I (I, L, M and V) TepRe1_1508 PF08264 Anticodon-binding domain of tRNA TepRe1_1508 PF09334 tRNA synthetases class I (M) TepRe1_1510 PF03816 Cell envelope-related transcriptional attenuator domain TepRe1_1511 PF01966 HD domain TepRe1_1512 PF01467 Cytidylyltransferase-like TepRe1_1513 PF01926 50S ribosome-binding GTPase TepRe1_1513 PF09269 Domain of unknown function (DUF1967) TepRe1_1513 PF01018 GTP1/OBG TepRe1_1515 PF01016 Ribosomal L27 protein TepRe1_1516 PF04327 Cysteine protease Prp TepRe1_1517 PF00829 Ribosomal prokaryotic L21 protein TepRe1_1519 PF14620 YpeB sporulation TepRe1_1520 PF01471 Putative peptidoglycan binding domain TepRe1_1520 PF07486 Cell Wall Hydrolase TepRe1_1525 PF00575 S1 RNA binding domain TepRe1_1525 PF10150 Ribonuclease E/G family TepRe1_1528 PF00571 CBS domain TepRe1_1528 PF02163 Peptidase family M50 TepRe1_1529 PF01476 LysM domain TepRe1_1529 PF01551 Peptidase family M23 TepRe1_1531 PF01098 Cell cycle protein TepRe1_1532 PF02491 SHS2 domain inserted in FTSA TepRe1_1533 PF03776 Septum formation topological specificity factor MinE TepRe1_1534 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TepRe1_1535 PF03775 Septum formation inhibitor MinC, C-terminal domain TepRe1_1536 PF00905 Penicillin binding protein transpeptidase domain TepRe1_1536 PF03717 Penicillin-binding Protein dimerisation domain TepRe1_1538 PF04085 rod shape-determining protein MreC TepRe1_1540 PF04002 RadC-like JAB domain TepRe1_1541 PF02545 Maf-like protein TepRe1_1545 PF04542 Sigma-70 region 2 TepRe1_1545 PF08281 Sigma-70, region 4 TepRe1_1551 PF08240 Alcohol dehydrogenase GroES-like domain TepRe1_1551 PF00107 Zinc-binding dehydrogenase TepRe1_1553 PF02447 GntP family permease TepRe1_1555 PF08240 Alcohol dehydrogenase GroES-like domain TepRe1_1555 PF00107 Zinc-binding dehydrogenase TepRe1_1556 PF04166 Pyridoxal phosphate biosynthetic protein PdxA TepRe1_1557 PF17042 Nucleotide-binding C-terminal domain TepRe1_1557 PF07005 Sugar-binding N-terminal domain TepRe1_1558 PF00158 Sigma-54 interaction domain TepRe1_1558 PF02954 Bacterial regulatory protein, Fis family TepRe1_1558 PF00989 PAS fold TepRe1_1560 PF01212 Beta-eliminating lyase TepRe1_1561 PF00672 HAMP domain TepRe1_1561 PF16591 Helical bimodular sensor domain TepRe1_1561 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TepRe1_1562 PF07670 Nucleoside recognition TepRe1_1563 PF07670 Nucleoside recognition TepRe1_1564 PF08459 UvrC Helix-hairpin-helix N-terminal TepRe1_1564 PF01541 GIY-YIG catalytic domain TepRe1_1564 PF12826 Helix-hairpin-helix motif TepRe1_1564 PF02151 UvrB/uvrC motif TepRe1_1565 PF01022 Bacterial regulatory protein, arsR family TepRe1_1566 PF05222 Alanine dehydrogenase/PNT, N-terminal domain TepRe1_1566 PF01262 Alanine dehydrogenase/PNT, C-terminal domain TepRe1_1568 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TepRe1_1568 PF00989 PAS fold TepRe1_1568 PF00512 His Kinase A (phospho-acceptor) domain TepRe1_1568 PF18698 Histidine kinase sensor domain TepRe1_1568 PF00672 HAMP domain TepRe1_1569 PF00072 Response regulator receiver domain TepRe1_1569 PF00486 Transcriptional regulatory protein, C terminal TepRe1_1570 PF01522 Polysaccharide deacetylase TepRe1_1573 PF02690 Na+/Pi-cotransporter TepRe1_1574 PF02690 Na+/Pi-cotransporter TepRe1_1575 PF02535 ZIP Zinc transporter TepRe1_1577 PF13407 Periplasmic binding protein domain TepRe1_1578 PF02653 Branched-chain amino acid transport system / permease component TepRe1_1579 PF00005 ABC transporter TepRe1_1579 PF08402 TOBE domain TepRe1_1580 PF01938 TRAM domain TepRe1_1580 PF00919 Uncharacterized protein family UPF0004 TepRe1_1580 PF04055 Radical SAM superfamily TepRe1_1582 PF08666 SAF domain TepRe1_1582 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus TepRe1_1583 PF08125 Mannitol dehydrogenase C-terminal domain TepRe1_1583 PF01232 Mannitol dehydrogenase Rossmann domain TepRe1_1584 PF04962 KduI/IolB family TepRe1_1586 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TepRe1_1588 PF03480 Bacterial extracellular solute-binding protein, family 7 TepRe1_1589 PF01047 MarR family TepRe1_1589 PF00480 ROK family TepRe1_1590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TepRe1_1590 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TepRe1_1592 PF01266 FAD dependent oxidoreductase TepRe1_1593 PF07992 Pyridine nucleotide-disulphide oxidoreductase TepRe1_1593 PF04324 BFD-like [2Fe-2S] binding domain TepRe1_1594 PF12798 4Fe-4S binding domain TepRe1_1594 PF00037 4Fe-4S binding domain TepRe1_1595 PF07992 Pyridine nucleotide-disulphide oxidoreductase TepRe1_1595 PF04324 BFD-like [2Fe-2S] binding domain TepRe1_1598 PF02926 THUMP domain TepRe1_1598 PF02568 Thiamine biosynthesis protein (ThiI) TepRe1_1599 PF00266 Aminotransferase class-V TepRe1_1601 PF08331 Domain of unknown function (DUF1730) TepRe1_1602 PF05979 Bacterial protein of unknown function (DUF896) TepRe1_1607 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TepRe1_1609 PF04284 Protein of unknown function (DUF441) TepRe1_1610 PF01464 Transglycosylase SLT domain TepRe1_1611 PF01121 Dephospho-CoA kinase TepRe1_1612 PF01367 5'-3' exonuclease, C-terminal SAM fold TepRe1_1612 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TepRe1_1612 PF00476 DNA polymerase family A TepRe1_1613 PF13490 Putative zinc-finger TepRe1_1614 PF08281 Sigma-70, region 4 TepRe1_1614 PF04542 Sigma-70 region 2 TepRe1_1615 PF00005 ABC transporter TepRe1_1616 PF12399 Branched-chain amino acid ATP-binding cassette transporter TepRe1_1616 PF00005 ABC transporter TepRe1_1617 PF11862 Domain of unknown function (DUF3382) TepRe1_1617 PF02653 Branched-chain amino acid transport system / permease component TepRe1_1618 PF02653 Branched-chain amino acid transport system / permease component TepRe1_1619 PF13458 Periplasmic binding protein TepRe1_1620 PF02535 ZIP Zinc transporter TepRe1_1621 PF00290 Tryptophan synthase alpha chain TepRe1_1622 PF00291 Pyridoxal-phosphate dependent enzyme TepRe1_1624 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase TepRe1_1626 PF02885 Glycosyl transferase family, helical bundle domain TepRe1_1626 PF00591 Glycosyl transferase family, a/b domain TepRe1_1627 PF00591 Glycosyl transferase family, a/b domain TepRe1_1627 PF02885 Glycosyl transferase family, helical bundle domain TepRe1_1627 PF00117 Glutamine amidotransferase class-I TepRe1_1628 PF04715 Anthranilate synthase component I, N terminal region TepRe1_1628 PF00425 chorismate binding enzyme TepRe1_1631 PF00232 Glycosyl hydrolase family 1 TepRe1_1632 PF02417 Chromate transporter TepRe1_1633 PF02417 Chromate transporter TepRe1_1634 PF00480 ROK family TepRe1_1634 PF01325 Iron dependent repressor, N-terminal DNA binding domain TepRe1_1635 PF13186 Iron-sulfur cluster-binding domain TepRe1_1635 PF04055 Radical SAM superfamily TepRe1_1636 PF16347 Domain of unknown function (DUF4976) TepRe1_1636 PF00884 Sulfatase TepRe1_1637 PF02378 Phosphotransferase system, EIIC TepRe1_1638 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TepRe1_1639 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit TepRe1_1642 PF02378 Phosphotransferase system, EIIC TepRe1_1644 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit TepRe1_1645 PF03610 PTS system fructose IIA component TepRe1_1645 PF00158 Sigma-54 interaction domain TepRe1_1645 PF00874 PRD domain TepRe1_1646 PF02743 Cache domain TepRe1_1646 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TepRe1_1646 PF00672 HAMP domain TepRe1_1647 PF01471 Putative peptidoglycan binding domain TepRe1_1647 PF07486 Cell Wall Hydrolase TepRe1_1648 PF13419 Haloacid dehalogenase-like hydrolase TepRe1_1649 PF01545 Cation efflux family TepRe1_1649 PF16916 Dimerisation domain of Zinc Transporter TepRe1_1651 PF17755 UvrA DNA-binding domain TepRe1_1651 PF17760 UvrA interaction domain TepRe1_1652 PF17757 UvrB interaction domain TepRe1_1652 PF04851 Type III restriction enzyme, res subunit TepRe1_1652 PF02151 UvrB/uvrC motif TepRe1_1652 PF12344 Ultra-violet resistance protein B TepRe1_1652 PF00271 Helicase conserved C-terminal domain TepRe1_1654 PF01177 Asp/Glu/Hydantoin racemase TepRe1_1655 PF17820 PDZ domain TepRe1_1655 PF13180 PDZ domain TepRe1_1656 PF03572 Peptidase family S41 TepRe1_1656 PF13180 PDZ domain TepRe1_1657 PF10145 Phage-related minor tail protein TepRe1_1657 PF01551 Peptidase family M23 TepRe1_1657 PF01464 Transglycosylase SLT domain TepRe1_1658 PF18075 FtsX extracellular domain TepRe1_1658 PF02687 FtsX-like permease family TepRe1_1659 PF00005 ABC transporter TepRe1_1660 PF00209 Sodium:neurotransmitter symporter family TepRe1_1661 PF04041 beta-1,4-mannooligosaccharide phosphorylase TepRe1_1667 PF01979 Amidohydrolase family TepRe1_1669 PF02779 Transketolase, pyrimidine binding domain TepRe1_1669 PF02780 Transketolase, C-terminal domain TepRe1_1669 PF13292 1-deoxy-D-xylulose-5-phosphate synthase TepRe1_1670 PF00456 Transketolase, thiamine diphosphate binding domain TepRe1_1671 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TepRe1_1671 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 TepRe1_1672 PF03808 Glycosyl transferase WecB/TagA/CpsF family TepRe1_1674 PF13439 Glycosyltransferase Family 4 TepRe1_1674 PF00534 Glycosyl transferases group 1 TepRe1_1677 PF00534 Glycosyl transferases group 1 TepRe1_1677 PF13439 Glycosyltransferase Family 4 TepRe1_1679 PF03109 ABC1 family TepRe1_1680 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP TepRe1_1680 PF12557 Cob(I)alamin adenosyltransferase N terminal TepRe1_1681 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase TepRe1_1682 PF01116 Fructose-bisphosphate aldolase class-II TepRe1_1684 PF03734 L,D-transpeptidase catalytic domain TepRe1_1685 PF00749 tRNA synthetases class I (E and Q), catalytic domain TepRe1_1686 PF01969 Protein of unknown function DUF111 TepRe1_1687 PF00731 AIR carboxylase TepRe1_1688 PF02540 NAD synthase TepRe1_1689 PF14490 Helix-hairpin-helix containing domain TepRe1_1689 PF13538 UvrD-like helicase C-terminal domain TepRe1_1689 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain TepRe1_1690 PF00704 Glycosyl hydrolases family 18 TepRe1_1691 PF00563 EAL domain TepRe1_1691 PF00990 Diguanylate cyclase, GGDEF domain TepRe1_1691 PF03707 Bacterial signalling protein N terminal repeat TepRe1_1692 PF03841 L-seryl-tRNA selenium transferase TepRe1_1693 PF00155 Aminotransferase class I and II TepRe1_1694 PF03830 PTS system sorbose subfamily IIB component TepRe1_1695 PF03613 PTS system mannose/fructose/sorbose family IID component TepRe1_1696 PF00266 Aminotransferase class-V TepRe1_1698 PF03830 PTS system sorbose subfamily IIB component TepRe1_1699 PF03830 PTS system sorbose subfamily IIB component TepRe1_1699 PF03610 PTS system fructose IIA component TepRe1_1700 PF03610 PTS system fructose IIA component TepRe1_1700 PF00874 PRD domain TepRe1_1700 PF00158 Sigma-54 interaction domain TepRe1_1701 PF00196 Bacterial regulatory proteins, luxR family TepRe1_1701 PF00072 Response regulator receiver domain TepRe1_1702 PF07730 Histidine kinase TepRe1_1702 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TepRe1_1702 PF05384 Sensor protein DegS TepRe1_1703 PF02773 S-adenosylmethionine synthetase, C-terminal domain TepRe1_1703 PF02772 S-adenosylmethionine synthetase, central domain TepRe1_1703 PF00438 S-adenosylmethionine synthetase, N-terminal domain TepRe1_1706 PF01950 Fructose-1,6-bisphosphatase TepRe1_1717 PF00958 GMP synthase C terminal domain TepRe1_1717 PF02540 NAD synthase TepRe1_1717 PF00117 Glutamine amidotransferase class-I TepRe1_1718 PF12704 MacB-like periplasmic core domain TepRe1_1718 PF02687 FtsX-like permease family TepRe1_1719 PF00005 ABC transporter TepRe1_1720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TepRe1_1722 PF00005 ABC transporter TepRe1_1723 PF00392 Bacterial regulatory proteins, gntR family TepRe1_1724 PF13580 SIS domain TepRe1_1725 PF00583 Acetyltransferase (GNAT) family TepRe1_1728 PF03609 PTS system sorbose-specific iic component TepRe1_1730 PF02585 GlcNAc-PI de-N-acetylase TepRe1_1731 PF01418 Helix-turn-helix domain, rpiR family TepRe1_1731 PF01380 SIS domain TepRe1_1732 PF02233 NAD(P) transhydrogenase beta subunit TepRe1_1733 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch TepRe1_1734 PF05222 Alanine dehydrogenase/PNT, N-terminal domain TepRe1_1734 PF01262 Alanine dehydrogenase/PNT, C-terminal domain TepRe1_1736 PF00989 PAS fold TepRe1_1736 PF00158 Sigma-54 interaction domain TepRe1_1736 PF02954 Bacterial regulatory protein, Fis family TepRe1_1737 PF00367 phosphotransferase system, EIIB TepRe1_1737 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 TepRe1_1737 PF02378 Phosphotransferase system, EIIC TepRe1_1738 PF03123 CAT RNA binding domain TepRe1_1738 PF00874 PRD domain TepRe1_1739 PF02378 Phosphotransferase system, EIIC TepRe1_1739 PF00367 phosphotransferase system, EIIB TepRe1_1739 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 TepRe1_1740 PF07729 FCD domain TepRe1_1740 PF00392 Bacterial regulatory proteins, gntR family TepRe1_1741 PF04962 KduI/IolB family TepRe1_1743 PF00107 Zinc-binding dehydrogenase TepRe1_1743 PF08240 Alcohol dehydrogenase GroES-like domain TepRe1_1744 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TepRe1_1744 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TepRe1_1745 PF00005 ABC transporter TepRe1_1746 PF00005 ABC transporter TepRe1_1746 PF12399 Branched-chain amino acid ATP-binding cassette transporter TepRe1_1747 PF11862 Domain of unknown function (DUF3382) TepRe1_1747 PF02653 Branched-chain amino acid transport system / permease component TepRe1_1748 PF02653 Branched-chain amino acid transport system / permease component TepRe1_1749 PF13458 Periplasmic binding protein TepRe1_1751 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain TepRe1_1751 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TepRe1_1753 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TepRe1_1753 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TepRe1_1754 PF01842 ACT domain TepRe1_1754 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TepRe1_1754 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TepRe1_1755 PF01232 Mannitol dehydrogenase Rossmann domain TepRe1_1755 PF08125 Mannitol dehydrogenase C-terminal domain TepRe1_1757 PF02719 Polysaccharide biosynthesis protein TepRe1_1758 PF03023 Lipid II flippase MurJ TepRe1_1760 PF01966 HD domain TepRe1_1764 PF13439 Glycosyltransferase Family 4 TepRe1_1764 PF00534 Glycosyl transferases group 1 TepRe1_1767 PF01370 NAD dependent epimerase/dehydratase family TepRe1_1768 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TepRe1_1768 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TepRe1_1768 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TepRe1_1770 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TepRe1_1771 PF01648 4'-phosphopantetheinyl transferase superfamily TepRe1_1772 PF00132 Bacterial transferase hexapeptide (six repeats) TepRe1_1772 PF14602 Hexapeptide repeat of succinyl-transferase TepRe1_1772 PF12464 Maltose acetyltransferase TepRe1_1774 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TepRe1_1774 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TepRe1_1776 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TepRe1_1776 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TepRe1_1777 PF02397 Bacterial sugar transferase TepRe1_1786 PF02861 Clp amino terminal domain, pathogenicity island component TepRe1_1786 PF17871 AAA lid domain TepRe1_1786 PF07724 AAA domain (Cdc48 subfamily) TepRe1_1786 PF00004 ATPase family associated with various cellular activities (AAA) TepRe1_1786 PF10431 C-terminal, D2-small domain, of ClpB protein TepRe1_1787 PF02142 MGS-like domain TepRe1_1789 PF02687 FtsX-like permease family TepRe1_1789 PF00005 ABC transporter TepRe1_1789 PF12704 MacB-like periplasmic core domain TepRe1_1790 PF00005 ABC transporter TepRe1_1791 PF13533 Biotin-lipoyl like TepRe1_1792 PF01142 tRNA pseudouridine synthase D (TruD) TepRe1_1795 PF01522 Polysaccharide deacetylase TepRe1_1796 PF01479 S4 domain TepRe1_1796 PF00849 RNA pseudouridylate synthase TepRe1_1797 PF01070 FMN-dependent dehydrogenase TepRe1_1798 PF07992 Pyridine nucleotide-disulphide oxidoreductase TepRe1_1798 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TepRe1_1801 PF00294 pfkB family carbohydrate kinase TepRe1_1802 PF01380 SIS domain TepRe1_1802 PF00571 CBS domain TepRe1_1803 PF00701 Dihydrodipicolinate synthetase family TepRe1_1804 PF03949 Malic enzyme, NAD binding domain TepRe1_1804 PF00390 Malic enzyme, N-terminal domain TepRe1_1806 PF01557 Fumarylacetoacetate (FAA) hydrolase family TepRe1_1807 PF00701 Dihydrodipicolinate synthetase family TepRe1_1808 PF02615 Malate/L-lactate dehydrogenase TepRe1_1809 PF00005 ABC transporter TepRe1_1810 PF00005 ABC transporter TepRe1_1810 PF12399 Branched-chain amino acid ATP-binding cassette transporter TepRe1_1811 PF02653 Branched-chain amino acid transport system / permease component TepRe1_1811 PF11862 Domain of unknown function (DUF3382) TepRe1_1812 PF02653 Branched-chain amino acid transport system / permease component TepRe1_1814 PF00356 Bacterial regulatory proteins, lacI family TepRe1_1816 PF00486 Transcriptional regulatory protein, C terminal TepRe1_1816 PF00072 Response regulator receiver domain TepRe1_1817 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TepRe1_1817 PF00512 His Kinase A (phospho-acceptor) domain TepRe1_1819 PF12704 MacB-like periplasmic core domain TepRe1_1819 PF02687 FtsX-like permease family TepRe1_1819 PF00005 ABC transporter TepRe1_1821 PF00890 FAD binding domain TepRe1_1821 PF02910 Fumarate reductase flavoprotein C-term TepRe1_1822 PF08240 Alcohol dehydrogenase GroES-like domain TepRe1_1822 PF00107 Zinc-binding dehydrogenase TepRe1_1824 PF04962 KduI/IolB family TepRe1_1825 PF00378 Enoyl-CoA hydratase/isomerase TepRe1_1826 PF01144 Coenzyme A transferase TepRe1_1827 PF01575 MaoC like domain TepRe1_1828 PF01261 Xylose isomerase-like TIM barrel TepRe1_1829 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TepRe1_1830 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component TepRe1_1831 PF03480 Bacterial extracellular solute-binding protein, family 7 TepRe1_1832 PF08501 Shikimate dehydrogenase substrate binding domain TepRe1_1832 PF18317 Shikimate 5'-dehydrogenase C-terminal domain TepRe1_1832 PF01488 Shikimate / quinate 5-dehydrogenase TepRe1_1833 PF00356 Bacterial regulatory proteins, lacI family TepRe1_1834 PF00294 pfkB family carbohydrate kinase TepRe1_1835 PF01081 KDPG and KHG aldolase TepRe1_1837 PF02653 Branched-chain amino acid transport system / permease component TepRe1_1838 PF00005 ABC transporter TepRe1_1839 PF13407 Periplasmic binding protein domain TepRe1_1840 PF13407 Periplasmic binding protein domain TepRe1_1841 PF00072 Response regulator receiver domain TepRe1_1841 PF04397 LytTr DNA-binding domain TepRe1_1842 PF07694 5TMR of 5TMR-LYT TepRe1_1842 PF06580 Histidine kinase TepRe1_1842 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TepRe1_1846 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TepRe1_1846 PF02743 Cache domain TepRe1_1846 PF00672 HAMP domain TepRe1_1847 PF01613 Flavin reductase like domain TepRe1_1848 PF00885 6,7-dimethyl-8-ribityllumazine synthase TepRe1_1849 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase TepRe1_1849 PF00925 GTP cyclohydrolase II TepRe1_1850 PF00677 Lumazine binding domain TepRe1_1851 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TepRe1_1851 PF01872 RibD C-terminal domain TepRe1_1852 PF03829 PTS system glucitol/sorbitol-specific IIA component TepRe1_1854 PF03612 Sorbitol phosphotransferase enzyme II N-terminus TepRe1_1854 PF07663 Sorbitol phosphotransferase enzyme II C-terminus TepRe1_1855 PF03608 PTS system enzyme II sorbitol-specific factor TepRe1_1857 PF00474 Sodium:solute symporter family TepRe1_1859 PF07969 Amidohydrolase family TepRe1_1860 PF01546 Peptidase family M20/M25/M40 TepRe1_1860 PF07687 Peptidase dimerisation domain TepRe1_1861 PF00291 Pyridoxal-phosphate dependent enzyme TepRe1_1863 PF02378 Phosphotransferase system, EIIC TepRe1_1864 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TepRe1_1865 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit TepRe1_1867 PF03610 PTS system fructose IIA component TepRe1_1867 PF00158 Sigma-54 interaction domain TepRe1_1867 PF00874 PRD domain TepRe1_1876 PF01212 Beta-eliminating lyase TepRe1_1877 PF13426 PAS domain TepRe1_1877 PF00158 Sigma-54 interaction domain TepRe1_1877 PF02954 Bacterial regulatory protein, Fis family TepRe1_1880 PF05067 Manganese containing catalase TepRe1_1881 PF00037 4Fe-4S binding domain TepRe1_1881 PF13187 4Fe-4S dicluster domain TepRe1_1881 PF04060 Putative Fe-S cluster TepRe1_1882 PF02508 Rnf-Nqr subunit, membrane protein TepRe1_1883 PF02508 Rnf-Nqr subunit, membrane protein TepRe1_1884 PF04205 FMN-binding domain TepRe1_1885 PF03116 NQR2, RnfD, RnfE family TepRe1_1886 PF13237 4Fe-4S dicluster domain TepRe1_1886 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TepRe1_1886 PF13375 RnfC Barrel sandwich hybrid domain TepRe1_1886 PF10531 SLBB domain TepRe1_1887 PF01226 Formate/nitrite transporter TepRe1_1888 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TepRe1_1888 PF00037 4Fe-4S binding domain TepRe1_1888 PF02256 Iron hydrogenase small subunit TepRe1_1888 PF02906 Iron only hydrogenase large subunit, C-terminal domain TepRe1_1889 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TepRe1_1889 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TepRe1_1889 PF00037 4Fe-4S binding domain TepRe1_1891 PF13426 PAS domain TepRe1_1891 PF13493 Domain of unknown function (DUF4118) TepRe1_1891 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TepRe1_1891 PF00989 PAS fold TepRe1_1891 PF00512 His Kinase A (phospho-acceptor) domain TepRe1_1891 PF08447 PAS fold TepRe1_1895 PF04060 Putative Fe-S cluster TepRe1_1896 PF13581 Histidine kinase-like ATPase domain TepRe1_1897 PF02629 CoA binding domain TepRe1_1897 PF06971 Putative DNA-binding protein N-terminus TepRe1_1898 PF02424 ApbE family TepRe1_1900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TepRe1_1900 PF00005 ABC transporter TepRe1_1901 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TepRe1_1901 PF00005 ABC transporter TepRe1_1904 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TepRe1_1905 PF02637 GatB domain TepRe1_1905 PF02934 GatB/GatE catalytic domain TepRe1_1906 PF01425 Amidase TepRe1_1907 PF02686 Glu-tRNAGln amidotransferase C subunit TepRe1_1910 PF00005 ABC transporter TepRe1_1911 PF00392 Bacterial regulatory proteins, gntR family TepRe1_1912 PF13735 tRNA nucleotidyltransferase domain 2 putative TepRe1_1912 PF01743 Poly A polymerase head domain TepRe1_1912 PF12627 Probable RNA and SrmB- binding site of polymerase A TepRe1_1914 PF03099 Biotin/lipoate A/B protein ligase family TepRe1_1914 PF08279 HTH domain TepRe1_1914 PF02237 Biotin protein ligase C terminal domain TepRe1_1918 PF04273 Putative phosphatase (DUF442) TepRe1_1918 PF00753 Metallo-beta-lactamase superfamily TepRe1_1920 PF00690 Cation transporter/ATPase, N-terminus TepRe1_1920 PF00689 Cation transporting ATPase, C-terminus TepRe1_1921 PF01884 PcrB family TepRe1_1923 PF01053 Cys/Met metabolism PLP-dependent enzyme TepRe1_1925 PF00375 Sodium:dicarboxylate symporter family TepRe1_1926 PF01048 Phosphorylase superfamily TepRe1_1927 PF01979 Amidohydrolase family TepRe1_1928 PF03129 Anticodon binding domain TepRe1_1928 PF13393 Histidyl-tRNA synthetase TepRe1_1935 PF01063 Amino-transferase class IV TepRe1_1936 PF00205 Thiamine pyrophosphate enzyme, central domain TepRe1_1936 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TepRe1_1936 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TepRe1_1937 PF00180 Isocitrate/isopropylmalate dehydrogenase TepRe1_1938 PF00694 Aconitase C-terminal domain TepRe1_1939 PF00330 Aconitase family (aconitate hydratase) TepRe1_1940 PF08502 LeuA allosteric (dimerisation) domain TepRe1_1940 PF00682 HMGL-like TepRe1_1941 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain TepRe1_1941 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain TepRe1_1942 PF10369 Small subunit of acetolactate synthase TepRe1_1943 PF00205 Thiamine pyrophosphate enzyme, central domain TepRe1_1943 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TepRe1_1943 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TepRe1_1948 PF01926 50S ribosome-binding GTPase TepRe1_1948 PF13167 GTP-binding GTPase N-terminal TepRe1_1948 PF16360 GTP-binding GTPase Middle Region TepRe1_1949 PF07687 Peptidase dimerisation domain TepRe1_1949 PF01546 Peptidase family M20/M25/M40 TepRe1_1950 PF04199 Putative cyclase TepRe1_1951 PF00920 Dehydratase family TepRe1_1952 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TepRe1_1952 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain TepRe1_1953 PF00392 Bacterial regulatory proteins, gntR family TepRe1_1953 PF07729 FCD domain TepRe1_1954 PF02779 Transketolase, pyrimidine binding domain TepRe1_1954 PF02780 Transketolase, C-terminal domain TepRe1_1955 PF00456 Transketolase, thiamine diphosphate binding domain TepRe1_1957 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component TepRe1_1957 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TepRe1_1959 PF03480 Bacterial extracellular solute-binding protein, family 7 TepRe1_1962 PF00440 Bacterial regulatory proteins, tetR family TepRe1_1963 PF07992 Pyridine nucleotide-disulphide oxidoreductase TepRe1_1963 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TepRe1_1964 PF02743 Cache domain TepRe1_1964 PF00672 HAMP domain TepRe1_1964 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TepRe1_1964 PF06580 Histidine kinase TepRe1_1965 PF00005 ABC transporter TepRe1_1966 PF00528 Binding-protein-dependent transport system inner membrane component TepRe1_1967 PF00497 Bacterial extracellular solute-binding proteins, family 3 TepRe1_1968 PF03030 Inorganic H+ pyrophosphatase TepRe1_1969 PF03840 Preprotein translocase SecG subunit TepRe1_1970 PF13361 UvrD-like helicase C-terminal domain TepRe1_1970 PF00580 UvrD/REP helicase N-terminal domain TepRe1_1970 PF12705 PD-(D/E)XK nuclease superfamily TepRe1_1971 PF12705 PD-(D/E)XK nuclease superfamily TepRe1_1972 PF03952 Enolase, N-terminal domain TepRe1_1972 PF00113 Enolase, C-terminal TIM barrel domain TepRe1_1973 PF01676 Metalloenzyme superfamily TepRe1_1973 PF06415 BPG-independent PGAM N-terminus (iPGM_N) TepRe1_1974 PF00121 Triosephosphate isomerase TepRe1_1975 PF00162 Phosphoglycerate kinase TepRe1_1976 PF04198 Putative sugar-binding domain TepRe1_1977 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TepRe1_1977 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TepRe1_1978 PF04552 Sigma-54, DNA binding domain TepRe1_1978 PF04963 Sigma-54 factor, core binding domain TepRe1_1978 PF00309 Sigma-54 factor, Activator interacting domain (AID) TepRe1_1982 PF02774 Semialdehyde dehydrogenase, dimerisation domain TepRe1_1982 PF01118 Semialdehyde dehydrogenase, NAD binding domain TepRe1_1983 PF13840 ACT domain TepRe1_1983 PF00696 Amino acid kinase family TepRe1_1984 PF01118 Semialdehyde dehydrogenase, NAD binding domain TepRe1_1984 PF02774 Semialdehyde dehydrogenase, dimerisation domain TepRe1_1985 PF00132 Bacterial transferase hexapeptide (six repeats) TepRe1_1988 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II TepRe1_1988 PF10371 Domain of unknown function TepRe1_1988 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase TepRe1_1988 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TepRe1_1988 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TepRe1_1989 PF02645 Uncharacterised protein, DegV family COG1307 TepRe1_1990 PF01048 Phosphorylase superfamily TepRe1_1992 PF00591 Glycosyl transferase family, a/b domain TepRe1_1992 PF02885 Glycosyl transferase family, helical bundle domain TepRe1_1992 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain TepRe1_1993 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TepRe1_1994 PF07702 UTRA domain TepRe1_1994 PF00392 Bacterial regulatory proteins, gntR family TepRe1_2001 PF01118 Semialdehyde dehydrogenase, NAD binding domain TepRe1_2001 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain TepRe1_2004 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain TepRe1_2004 PF17203 Single cache domain 3 TepRe1_2004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TepRe1_2006 PF04397 LytTr DNA-binding domain TepRe1_2006 PF00072 Response regulator receiver domain TepRe1_2010 PF04260 Protein of unknown function (DUF436) TepRe1_2011 PF00271 Helicase conserved C-terminal domain TepRe1_2011 PF12419 SNF2 Helicase protein TepRe1_2011 PF00176 SNF2 family N-terminal domain TepRe1_2012 PF04434 SWIM zinc finger TepRe1_2013 PF03932 CutC family TepRe1_2014 PF13580 SIS domain TepRe1_2017 PF03611 PTS system sugar-specific permease component TepRe1_2018 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TepRe1_2019 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TepRe1_2020 PF09861 Lactate racemase N-terminal domain TepRe1_2023 PF00155 Aminotransferase class I and II TepRe1_2024 PF01965 DJ-1/PfpI family TepRe1_2027 PF01676 Metalloenzyme superfamily TepRe1_2028 PF01168 Alanine racemase, N-terminal domain TepRe1_2029 PF00155 Aminotransferase class I and II TepRe1_2030 PF02126 Phosphotriesterase family TepRe1_2031 PF10797 Protein of unknown function TepRe1_2032 PF10941 Protein of unknown function DUF2620 TepRe1_2033 PF00874 PRD domain TepRe1_2033 PF03123 CAT RNA binding domain TepRe1_2034 PF14502 Helix-turn-helix domain TepRe1_2034 PF14503 YhfZ C-terminal domain TepRe1_2037 PF01244 Membrane dipeptidase (Peptidase family M19) TepRe1_2038 PF03006 Haemolysin-III related TepRe1_2039 PF02583 Metal-sensitive transcriptional repressor TepRe1_2040 PF00403 Heavy-metal-associated domain TepRe1_2041 PF00155 Aminotransferase class I and II TepRe1_2043 PF00512 His Kinase A (phospho-acceptor) domain TepRe1_2043 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TepRe1_2043 PF00672 HAMP domain TepRe1_2044 PF00486 Transcriptional regulatory protein, C terminal TepRe1_2044 PF00072 Response regulator receiver domain TepRe1_2048 PF10662 Ethanolamine utilisation - propanediol utilisation TepRe1_2049 PF00936 BMC domain TepRe1_2050 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TepRe1_2051 PF01791 DeoC/LacD family aldolase TepRe1_2052 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TepRe1_2052 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TepRe1_2053 PF00248 Aldo/keto reductase family TepRe1_2054 PF02653 Branched-chain amino acid transport system / permease component TepRe1_2055 PF00005 ABC transporter TepRe1_2056 PF13407 Periplasmic binding protein domain TepRe1_2057 PF00356 Bacterial regulatory proteins, lacI family TepRe1_2057 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family TepRe1_2059 PF01384 Phosphate transporter family TepRe1_2060 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain TepRe1_2060 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TepRe1_2062 PF01479 S4 domain TepRe1_2062 PF00579 tRNA synthetases class I (W and Y) TepRe1_2064 PF06305 Lipopolysaccharide assembly protein A domain TepRe1_2065 PF07977 FabA-like domain TepRe1_2066 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase TepRe1_2066 PF10135 Rod binding protein TepRe1_2067 PF00460 Flagella basal body rod protein TepRe1_2067 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TepRe1_2068 PF00460 Flagella basal body rod protein TepRe1_2068 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TepRe1_2070 PF12116 Stage III sporulation protein D TepRe1_2071 PF01551 Peptidase family M23 TepRe1_2071 PF01476 LysM domain TepRe1_2072 PF08486 Stage II sporulation protein TepRe1_2073 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TepRe1_2075 PF00535 Glycosyl transferase family 2 TepRe1_2076 PF01813 ATP synthase subunit D TepRe1_2077 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TepRe1_2077 PF02874 ATP synthase alpha/beta family, beta-barrel domain TepRe1_2078 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TepRe1_2078 PF02874 ATP synthase alpha/beta family, beta-barrel domain TepRe1_2078 PF16886 ATPsynthase alpha/beta subunit N-term extension TepRe1_2079 PF01990 ATP synthase (F/14-kDa) subunit TepRe1_2081 PF01991 ATP synthase (E/31 kDa) subunit TepRe1_2082 PF00137 ATP synthase subunit C TepRe1_2083 PF01496 V-type ATPase 116kDa subunit family TepRe1_2089 PF02350 UDP-N-acetylglucosamine 2-epimerase TepRe1_2090 PF00953 Glycosyl transferase family 4 TepRe1_2091 PF02780 Transketolase, C-terminal domain TepRe1_2091 PF13292 1-deoxy-D-xylulose-5-phosphate synthase TepRe1_2091 PF02779 Transketolase, pyrimidine binding domain TepRe1_2092 PF00456 Transketolase, thiamine diphosphate binding domain TepRe1_2093 PF00528 Binding-protein-dependent transport system inner membrane component TepRe1_2094 PF00528 Binding-protein-dependent transport system inner membrane component TepRe1_2095 PF01547 Bacterial extracellular solute-binding protein TepRe1_2096 PF07729 FCD domain TepRe1_2096 PF00392 Bacterial regulatory proteins, gntR family TepRe1_2099 PF01970 Tripartite tricarboxylate transporter TctA family TepRe1_2101 PF03401 Tripartite tricarboxylate transporter family receptor TepRe1_2102 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TepRe1_2103 PF01380 SIS domain TepRe1_2103 PF01418 Helix-turn-helix domain, rpiR family TepRe1_2104 PF00480 ROK family TepRe1_2105 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase TepRe1_2106 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TepRe1_2107 PF13419 Haloacid dehalogenase-like hydrolase TepRe1_2108 PF02378 Phosphotransferase system, EIIC TepRe1_2108 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TepRe1_2109 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TepRe1_2109 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TepRe1_2111 PF00464 Serine hydroxymethyltransferase TepRe1_2112 PF02502 Ribose/Galactose Isomerase TepRe1_2113 PF01451 Low molecular weight phosphotyrosine protein phosphatase TepRe1_2114 PF03481 Putative GTP-binding controlling metal-binding TepRe1_2114 PF01300 Telomere recombination TepRe1_2115 PF05175 Methyltransferase small domain TepRe1_2115 PF17827 PrmC N-terminal domain TepRe1_2116 PF03462 PCRF domain TepRe1_2116 PF00472 RF-1 domain TepRe1_2117 PF07136 Protein of unknown function (DUF1385) TepRe1_2118 PF01197 Ribosomal protein L31 TepRe1_2121 PF00171 Aldehyde dehydrogenase family TepRe1_2122 PF00696 Amino acid kinase family TepRe1_2122 PF01472 PUA domain TepRe1_2123 PF11871 Domain of unknown function (DUF3391) TepRe1_2123 PF01966 HD domain TepRe1_2124 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase TepRe1_2124 PF01871 AMMECR1 TepRe1_2126 PF00202 Aminotransferase class-III TepRe1_2130 PF01207 Dihydrouridine synthase (Dus) TepRe1_2131 PF03309 Type III pantothenate kinase TepRe1_2134 PF01434 Peptidase family M41 TepRe1_2134 PF17862 AAA+ lid domain TepRe1_2134 PF00004 ATPase family associated with various cellular activities (AAA) TepRe1_2134 PF06480 FtsH Extracellular TepRe1_2137 PF13556 PucR C-terminal helix-turn-helix domain TepRe1_2137 PF17853 GGDEF-like domain TepRe1_2137 PF05651 Putative sugar diacid recognition TepRe1_2138 PF00672 HAMP domain TepRe1_2138 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TepRe1_2138 PF02743 Cache domain TepRe1_2139 PF00107 Zinc-binding dehydrogenase TepRe1_2139 PF08240 Alcohol dehydrogenase GroES-like domain TepRe1_2140 PF02447 GntP family permease TepRe1_2141 PF02595 Glycerate kinase family TepRe1_2142 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TepRe1_2142 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TepRe1_2143 PF02447 GntP family permease TepRe1_2144 PF01116 Fructose-bisphosphate aldolase class-II TepRe1_2145 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TepRe1_2145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TepRe1_2146 PF01418 Helix-turn-helix domain, rpiR family TepRe1_2146 PF01380 SIS domain TepRe1_2147 PF04962 KduI/IolB family TepRe1_2148 PF03480 Bacterial extracellular solute-binding protein, family 7 TepRe1_2150 PF01171 PP-loop family TepRe1_2150 PF11734 TilS substrate C-terminal domain TepRe1_2155 PF00535 Glycosyl transferase family 2 TepRe1_2156 PF00011 Hsp20/alpha crystallin family TepRe1_2157 PF16320 Ribosomal protein L7/L12 dimerisation domain TepRe1_2157 PF00542 Ribosomal protein L7/L12 C-terminal domain TepRe1_2158 PF00466 Ribosomal protein L10 TepRe1_2159 PF00687 Ribosomal protein L1p/L10e family TepRe1_2160 PF00298 Ribosomal protein L11, RNA binding domain TepRe1_2160 PF03946 Ribosomal protein L11, N-terminal domain TepRe1_2161 PF00467 KOW motif TepRe1_2161 PF02357 Transcription termination factor nusG TepRe1_2162 PF00584 SecE/Sec61-gamma subunits of protein translocation complex TepRe1_2163 PF00471 Ribosomal protein L33 TepRe1_2166 PF03143 Elongation factor Tu C-terminal domain TepRe1_2166 PF03144 Elongation factor Tu domain 2 TepRe1_2166 PF00009 Elongation factor Tu GTP binding domain TepRe1_2167 PF04542 Sigma-70 region 2 TepRe1_2167 PF08281 Sigma-70, region 4 TepRe1_2168 PF05991 YacP-like NYN domain TepRe1_2169 PF00588 SpoU rRNA Methylase family TepRe1_2169 PF08032 RNA 2'-O ribose methyltransferase substrate binding TepRe1_2170 PF02511 Thymidylate synthase complementing protein TepRe1_2171 PF00636 Ribonuclease III domain TepRe1_2172 PF09190 DALR domain TepRe1_2172 PF01406 tRNA synthetases class I (C) catalytic domain TepRe1_2173 PF00132 Bacterial transferase hexapeptide (six repeats) TepRe1_2174 PF02542 YgbB family TepRe1_2175 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TepRe1_2177 PF02559 CarD-like/TRCF domain TepRe1_2179 PF18073 Rubredoxin metal binding domain TepRe1_2180 PF02861 Clp amino terminal domain, pathogenicity island component TepRe1_2180 PF10431 C-terminal, D2-small domain, of ClpB protein TepRe1_2180 PF17871 AAA lid domain TepRe1_2180 PF07724 AAA domain (Cdc48 subfamily) TepRe1_2180 PF00004 ATPase family associated with various cellular activities (AAA) TepRe1_2181 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain TepRe1_2182 PF02151 UvrB/uvrC motif TepRe1_2183 PF17727 CtsR C-terminal dimerization domain TepRe1_2183 PF05848 CtsR N-terminal HTH domain TepRe1_2185 PF00679 Elongation factor G C-terminus TepRe1_2185 PF03764 Elongation factor G, domain IV TepRe1_2185 PF03144 Elongation factor Tu domain 2 TepRe1_2185 PF00009 Elongation factor Tu GTP binding domain TepRe1_2185 PF14492 Elongation Factor G, domain II TepRe1_2186 PF00571 CBS domain TepRe1_2186 PF00478 IMP dehydrogenase / GMP reductase domain TepRe1_2188 PF00158 Sigma-54 interaction domain TepRe1_2188 PF00874 PRD domain TepRe1_2188 PF03610 PTS system fructose IIA component TepRe1_2189 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TepRe1_2190 PF02378 Phosphotransferase system, EIIC TepRe1_2191 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit TepRe1_2193 PF02056 Family 4 glycosyl hydrolase TepRe1_2193 PF11975 Family 4 glycosyl hydrolase C-terminal domain TepRe1_2194 PF00265 Thymidine kinase TepRe1_2195 PF03477 ATP cone domain TepRe1_2195 PF02867 Ribonucleotide reductase, barrel domain TepRe1_2195 PF00317 Ribonucleotide reductase, all-alpha domain TepRe1_2195 PF00317 Ribonucleotide reductase, all-alpha domain TepRe1_2195 PF02867 Ribonucleotide reductase, barrel domain TepRe1_2195 PF03477 ATP cone domain TepRe1_2199 PF01734 Patatin-like phospholipase TepRe1_2200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TepRe1_2201 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II TepRe1_2201 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TepRe1_2203 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase TepRe1_2209 PF00365 Phosphofructokinase TepRe1_2210 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain TepRe1_2210 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain TepRe1_2212 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TepRe1_2212 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TepRe1_2213 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TepRe1_2213 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TepRe1_2215 PF04324 BFD-like [2Fe-2S] binding domain TepRe1_2215 PF07992 Pyridine nucleotide-disulphide oxidoreductase TepRe1_2216 PF01266 FAD dependent oxidoreductase TepRe1_2217 PF00121 Triosephosphate isomerase TepRe1_2218 PF02502 Ribose/Galactose Isomerase TepRe1_2219 PF08220 DeoR-like helix-turn-helix domain TepRe1_2219 PF00455 DeoR C terminal sensor domain TepRe1_2220 PF02734 DAK2 domain TepRe1_2221 PF02733 Dak1 domain TepRe1_2222 PF00478 IMP dehydrogenase / GMP reductase domain TepRe1_2222 PF00571 CBS domain TepRe1_2225 PF02384 N-6 DNA Methylase TepRe1_2226 PF07690 Major Facilitator Superfamily TepRe1_2228 PF01515 Phosphate acetyl/butaryl transferase TepRe1_2235 PF03358 NADPH-dependent FMN reductase TepRe1_2239 PF00005 ABC transporter TepRe1_2240 PF01022 Bacterial regulatory protein, arsR family TepRe1_2243 PF00990 Diguanylate cyclase, GGDEF domain TepRe1_2244 PF01980 tRNA-methyltransferase O TepRe1_2245 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit TepRe1_2246 PF01112 Asparaginase TepRe1_2247 PF01546 Peptidase family M20/M25/M40 TepRe1_2249 PF02378 Phosphotransferase system, EIIC TepRe1_2251 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TepRe1_2252 PF05043 Mga helix-turn-helix domain TepRe1_2252 PF00874 PRD domain TepRe1_2252 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TepRe1_2252 PF08279 HTH domain TepRe1_2252 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TepRe1_2253 PF01242 6-pyruvoyl tetrahydropterin synthase TepRe1_2254 PF02649 Type I GTP cyclohydrolase folE2 TepRe1_2255 PF00809 Pterin binding enzyme TepRe1_2256 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) TepRe1_2256 PF02152 Dihydroneopterin aldolase TepRe1_2258 PF00232 Glycosyl hydrolase family 1 TepRe1_2259 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TepRe1_2259 PF07992 Pyridine nucleotide-disulphide oxidoreductase TepRe1_2260 PF02378 Phosphotransferase system, EIIC TepRe1_2263 PF05043 Mga helix-turn-helix domain TepRe1_2263 PF08279 HTH domain TepRe1_2263 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TepRe1_2263 PF00874 PRD domain TepRe1_2264 PF02743 Cache domain TepRe1_2264 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TepRe1_2264 PF00672 HAMP domain TepRe1_2265 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase TepRe1_2265 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase TepRe1_2266 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase TepRe1_2272 PF09861 Lactate racemase N-terminal domain TepRe1_2273 PF04223 Citrate lyase, alpha subunit (CitF) TepRe1_2274 PF03328 HpcH/HpaI aldolase/citrate lyase family TepRe1_2275 PF06857 Malonate decarboxylase delta subunit (MdcD) TepRe1_2276 PF00330 Aconitase family (aconitate hydratase) TepRe1_2277 PF00330 Aconitase family (aconitate hydratase) TepRe1_2277 PF00694 Aconitase C-terminal domain TepRe1_2278 PF00180 Isocitrate/isopropylmalate dehydrogenase TepRe1_2278 PF18324 Hypothetical protein TT1725 TepRe1_2279 PF04303 PrpF protein TepRe1_2280 PF04303 PrpF protein TepRe1_2282 PF03466 LysR substrate binding domain TepRe1_2282 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TepRe1_2284 PF08218 Citrate lyase ligase C-terminal domain TepRe1_2284 PF00583 Acetyltransferase (GNAT) family TepRe1_2290 PF01451 Low molecular weight phosphotyrosine protein phosphatase TepRe1_2293 PF00694 Aconitase C-terminal domain TepRe1_2294 PF00330 Aconitase family (aconitate hydratase) TepRe1_2295 PF02447 GntP family permease TepRe1_2312 PF03793 PASTA domain TepRe1_2312 PF00069 Protein kinase domain TepRe1_2334 PF02132 RecR protein TepRe1_2334 PF13662 Toprim domain TepRe1_2335 PF02575 YbaB/EbfC DNA-binding family TepRe1_2336 PF12169 DNA polymerase III subunits gamma and tau domain III TepRe1_2337 PF14437 MafB19-like deaminase TepRe1_2338 PF00583 Acetyltransferase (GNAT) family TepRe1_2339 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain TepRe1_2339 PF01522 Polysaccharide deacetylase TepRe1_2340 PF04456 Protein of unknown function (DUF503) TepRe1_2342 PF00005 ABC transporter TepRe1_2343 PF00528 Binding-protein-dependent transport system inner membrane component TepRe1_2344 PF02423 Ornithine cyclodeaminase/mu-crystallin family TepRe1_2345 PF00497 Bacterial extracellular solute-binding proteins, family 3 TepRe1_2347 PF00209 Sodium:neurotransmitter symporter family TepRe1_2348 PF01212 Beta-eliminating lyase TepRe1_2349 PF02954 Bacterial regulatory protein, Fis family TepRe1_2349 PF00158 Sigma-54 interaction domain TepRe1_2349 PF00989 PAS fold TepRe1_2354 PF07729 FCD domain TepRe1_2354 PF00392 Bacterial regulatory proteins, gntR family TepRe1_2355 PF02652 L-lactate permease TepRe1_2356 PF01012 Electron transfer flavoprotein domain TepRe1_2357 PF01012 Electron transfer flavoprotein domain TepRe1_2357 PF00766 Electron transfer flavoprotein FAD-binding domain TepRe1_2358 PF01565 FAD binding domain TepRe1_2358 PF02913 FAD linked oxidases, C-terminal domain TepRe1_2362 PF04542 Sigma-70 region 2 TepRe1_2362 PF08281 Sigma-70, region 4 TepRe1_2364 PF00528 Binding-protein-dependent transport system inner membrane component TepRe1_2365 PF00571 CBS domain TepRe1_2365 PF00005 ABC transporter TepRe1_2367 PF11738 Protein of unknown function (DUF3298) TepRe1_2367 PF01522 Polysaccharide deacetylase TepRe1_2367 PF13739 Deacetylase PdaC TepRe1_2368 PF13520 Amino acid permease TepRe1_2369 PF00155 Aminotransferase class I and II TepRe1_2371 PF01381 Helix-turn-helix TepRe1_2371 PF07883 Cupin domain TepRe1_2377 PF03965 Penicillinase repressor TepRe1_2391 PF04221 RelB antitoxin TepRe1_2400 PF04754 Putative transposase, YhgA-like TepRe1_2402 PF00589 Phage integrase family TepRe1_2402 PF02899 Phage integrase, N-terminal SAM-like domain TepRe1_2403 PF01520 N-acetylmuramoyl-L-alanine amidase TepRe1_2403 PF08239 Bacterial SH3 domain TepRe1_2404 PF05105 Bacteriophage holin family TepRe1_2422 PF00574 Clp protease TepRe1_2424 PF03354 Phage Terminase TepRe1_2430 PF01555 DNA methylase TepRe1_2431 PF04221 RelB antitoxin TepRe1_2432 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ TepRe1_2439 PF00005 ABC transporter TepRe1_2443 PF01367 5'-3' exonuclease, C-terminal SAM fold TepRe1_2443 PF01612 3'-5' exonuclease TepRe1_2443 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TepRe1_2443 PF00476 DNA polymerase family A TepRe1_2454 PF00395 S-layer homology domain TepRe1_2456 PF02388 FemAB family TepRe1_2457 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TepRe1_2457 PF00672 HAMP domain TepRe1_2458 PF06418 CTP synthase N-terminus TepRe1_2458 PF00117 Glutamine amidotransferase class-I TepRe1_2460 PF00750 tRNA synthetases class I (R) TepRe1_2460 PF03485 Arginyl tRNA synthetase N terminal domain TepRe1_2460 PF05746 DALR anticodon binding domain TepRe1_2462 PF00156 Phosphoribosyl transferase domain TepRe1_2463 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family TepRe1_2464 PF01180 Dihydroorotate dehydrogenase TepRe1_2465 PF00970 Oxidoreductase FAD-binding domain TepRe1_2465 PF00175 Oxidoreductase NAD-binding domain TepRe1_2465 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B TepRe1_2466 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TepRe1_2466 PF02142 MGS-like domain TepRe1_2466 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TepRe1_2467 PF01979 Amidohydrolase family TepRe1_2468 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TepRe1_2468 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TepRe1_2469 PF00800 Prephenate dehydratase TepRe1_2469 PF01817 Chorismate mutase type II TepRe1_2469 PF01842 ACT domain TepRe1_2470 PF18152 DAHP synthase ferredoxin-like domain TepRe1_2470 PF00793 DAHP synthetase I family TepRe1_2471 PF01842 ACT domain TepRe1_2471 PF02153 Prephenate dehydrogenase TepRe1_2472 PF01761 3-dehydroquinate synthase TepRe1_2473 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TepRe1_2474 PF01264 Chorismate synthase TepRe1_2476 PF08501 Shikimate dehydrogenase substrate binding domain TepRe1_2476 PF01488 Shikimate / quinate 5-dehydrogenase TepRe1_2477 PF01202 Shikimate kinase TepRe1_2478 PF01220 Dehydroquinase class II TepRe1_2479 PF01177 Asp/Glu/Hydantoin racemase TepRe1_2480 PF01471 Putative peptidoglycan binding domain TepRe1_2480 PF07486 Cell Wall Hydrolase TepRe1_2481 PF00269 Small, acid-soluble spore proteins, alpha/beta type TepRe1_2482 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain TepRe1_2482 PF01276 Orn/Lys/Arg decarboxylase, major domain TepRe1_2483 PF09551 Stage II sporulation protein R (spore_II_R) TepRe1_2487 PF05167 Uncharacterised ACR (DUF711) TepRe1_2488 PF06452 Carbohydrate family 9 binding domain-like TepRe1_2488 PF00331 Glycosyl hydrolase family 10 TepRe1_2488 PF00395 S-layer homology domain TepRe1_2488 PF02018 Carbohydrate binding domain TepRe1_2492 PF02417 Chromate transporter TepRe1_2493 PF02417 Chromate transporter TepRe1_2494 PF01235 Sodium:alanine symporter family TepRe1_2495 PF04960 Glutaminase TepRe1_2499 PF01554 MatE TepRe1_2500 PF02311 AraC-like ligand binding domain TepRe1_2500 PF12833 Helix-turn-helix domain TepRe1_2501 PF01751 Toprim domain TepRe1_2501 PF01131 DNA topoisomerase TepRe1_2503 PF16124 RecQ zinc-binding TepRe1_2503 PF00271 Helicase conserved C-terminal domain TepRe1_2503 PF00270 DEAD/DEAH box helicase TepRe1_2503 PF00570 HRDC domain TepRe1_2503 PF09382 RQC domain TepRe1_2504 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TepRe1_2504 PF02256 Iron hydrogenase small subunit TepRe1_2504 PF00037 4Fe-4S binding domain TepRe1_2504 PF02906 Iron only hydrogenase large subunit, C-terminal domain TepRe1_2505 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TepRe1_2505 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TepRe1_2505 PF00037 4Fe-4S binding domain TepRe1_2507 PF01476 LysM domain TepRe1_2513 PF00005 ABC transporter TepRe1_2521 PF10369 Small subunit of acetolactate synthase TepRe1_2522 PF01478 Type IV leader peptidase family TepRe1_2522 PF06750 Bacterial Peptidase A24 N-terminal domain TepRe1_2525 PF00072 Response regulator receiver domain TepRe1_2527 PF00196 Bacterial regulatory proteins, luxR family TepRe1_2527 PF00072 Response regulator receiver domain TepRe1_2528 PF00072 Response regulator receiver domain TepRe1_2528 PF01584 CheW-like domain TepRe1_2530 PF01680 SOR/SNZ family TepRe1_2531 PF00155 Aminotransferase class I and II TepRe1_2532 PF00392 Bacterial regulatory proteins, gntR family TepRe1_2532 PF07729 FCD domain TepRe1_2533 PF02743 Cache domain TepRe1_2533 PF00672 HAMP domain TepRe1_2533 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TepRe1_2534 PF01590 GAF domain TepRe1_2534 PF08446 PAS fold TepRe1_2534 PF00512 His Kinase A (phospho-acceptor) domain TepRe1_2534 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TepRe1_2534 PF00360 Phytochrome region TepRe1_2535 PF11871 Domain of unknown function (DUF3391) TepRe1_2535 PF01966 HD domain TepRe1_2536 PF00158 Sigma-54 interaction domain TepRe1_2536 PF00874 PRD domain TepRe1_2536 PF03610 PTS system fructose IIA component TepRe1_2537 PF03830 PTS system sorbose subfamily IIB component TepRe1_2537 PF03610 PTS system fructose IIA component TepRe1_2538 PF03830 PTS system sorbose subfamily IIB component TepRe1_2539 PF03609 PTS system sorbose-specific iic component TepRe1_2540 PF03613 PTS system mannose/fructose/sorbose family IID component TepRe1_2541 PF00107 Zinc-binding dehydrogenase TepRe1_2541 PF08240 Alcohol dehydrogenase GroES-like domain TepRe1_2542 PF01116 Fructose-bisphosphate aldolase class-II TepRe1_2544 PF07992 Pyridine nucleotide-disulphide oxidoreductase TepRe1_2544 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TepRe1_2545 PF00701 Dihydrodipicolinate synthetase family TepRe1_2546 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TepRe1_2546 PF02203 Tar ligand binding domain homologue TepRe1_2546 PF00672 HAMP domain TepRe1_2548 PF03313 Serine dehydratase alpha chain TepRe1_2551 PF02146 Sir2 family TepRe1_2552 PF02645 Uncharacterised protein, DegV family COG1307 TepRe1_2555 PF17284 Spermidine synthase tetramerisation domain TepRe1_2558 PF01835 MG2 domain TepRe1_2558 PF07703 Alpha-2-macroglobulin bait region domain TepRe1_2558 PF00207 Alpha-2-macroglobulin family TepRe1_2560 PF02632 BioY family TepRe1_2561 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 TepRe1_2564 PF00149 Calcineurin-like phosphoesterase TepRe1_2565 PF03372 Endonuclease/Exonuclease/phosphatase family TepRe1_2566 PF07992 Pyridine nucleotide-disulphide oxidoreductase TepRe1_2568 PF00581 Rhodanese-like domain TepRe1_2568 PF01206 Sulfurtransferase TusA TepRe1_2569 PF04143 Sulphur transport TepRe1_2570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TepRe1_2570 PF03466 LysR substrate binding domain TepRe1_2574 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TepRe1_2574 PF02378 Phosphotransferase system, EIIC TepRe1_2575 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TepRe1_2575 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TepRe1_2576 PF00294 pfkB family carbohydrate kinase TepRe1_2577 PF08220 DeoR-like helix-turn-helix domain TepRe1_2577 PF00455 DeoR C terminal sensor domain TepRe1_2578 PF03063 Prismane/CO dehydrogenase family TepRe1_2581 PF00027 Cyclic nucleotide-binding domain TepRe1_2581 PF13545 Crp-like helix-turn-helix domain TepRe1_2584 PF12728 Helix-turn-helix domain TepRe1_2584 PF02661 Fic/DOC family TepRe1_2596 PF02310 B12 binding domain TepRe1_2596 PF00809 Pterin binding enzyme TepRe1_2596 PF02607 B12 binding domain TepRe1_2596 PF02965 Vitamin B12 dependent methionine synthase, activation domain TepRe1_2596 PF02574 Homocysteine S-methyltransferase TepRe1_2597 PF00005 ABC transporter TepRe1_2598 PF00528 Binding-protein-dependent transport system inner membrane component TepRe1_2599 PF00497 Bacterial extracellular solute-binding proteins, family 3 TepRe1_2600 PF13180 PDZ domain TepRe1_2605 PF00672 HAMP domain TepRe1_2605 PF13426 PAS domain TepRe1_2605 PF00512 His Kinase A (phospho-acceptor) domain TepRe1_2605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TepRe1_2606 PF00486 Transcriptional regulatory protein, C terminal TepRe1_2606 PF00072 Response regulator receiver domain TepRe1_2609 PF01551 Peptidase family M23 TepRe1_2613 PF00772 DnaB-like helicase N terminal domain TepRe1_2613 PF03796 DnaB-like helicase C terminal domain TepRe1_2615 PF01368 DHH family TepRe1_2615 PF02272 DHHA1 domain TepRe1_2616 PF09991 Predicted membrane protein (DUF2232) TepRe1_2618 PF00436 Single-strand binding protein family TepRe1_2619 PF01250 Ribosomal protein S6 TepRe1_2620 PF06107 Bacterial protein of unknown function (DUF951) TepRe1_2621 PF00924 Mechanosensitive ion channel TepRe1_2625 PF06866 Protein of unknown function (DUF1256) TepRe1_2627 PF01551 Peptidase family M23 TepRe1_2627 PF01476 LysM domain TepRe1_2631 PF02195 ParB-like nuclease domain TepRe1_2631 PF17762 HTH domain found in ParB protein TepRe1_2632 PF13614 AAA domain TepRe1_2633 PF17762 HTH domain found in ParB protein TepRe1_2633 PF02195 ParB-like nuclease domain TepRe1_2634 PF02527 rRNA small subunit methyltransferase G TepRe1_2635 PF01134 Glucose inhibited division protein A TepRe1_2635 PF13932 GidA associated domain TepRe1_2636 PF10396 GTP-binding protein TrmE N-terminus TepRe1_2636 PF12631 MnmE helical domain TepRe1_2636 PF01926 50S ribosome-binding GTPase TepRe1_2637 PF01424 R3H domain TepRe1_2637 PF14804 Jag N-terminus TepRe1_2638 PF02096 60Kd inner membrane protein TepRe1_2639 PF01809 Putative membrane protein insertion efficiency factor TepRe1_2640 PF00825 Ribonuclease P TepRe1_2641 PF00468 Ribosomal protein L34