locus-tag	class	description
TepRe1_0002	COG0592	DNA-directed DNA polymerase activity
TepRe1_0003	COG2501	S4 domain
TepRe1_0004	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
TepRe1_0007	COG0187	DNA topoisomerase II activity
TepRe1_0008	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
TepRe1_0009	COG1982	Orn Lys Arg decarboxylase major
TepRe1_0010	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
TepRe1_0011	COG3870	Protein conserved in bacteria
TepRe1_0012	COG1728	Protein conserved in bacteria
TepRe1_0014	COG1774	PSP1 C-terminal conserved region
TepRe1_0015	COG2738	Putative neutral zinc metallopeptidase
TepRe1_0016	COG3290	protein histidine kinase activity
TepRe1_0016	COG3829	transcription factor binding
TepRe1_0018	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
TepRe1_0020	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
TepRe1_0021	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
TepRe1_0033	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
TepRe1_0034	COG2002	toxin-antitoxin pair type II binding
TepRe1_0037	COG1396	sequence-specific DNA binding
TepRe1_0038	COG0006	proline dipeptidase activity
TepRe1_0039	COG4166	transmembrane transport
TepRe1_0040	COG0601	transmembrane transport
TepRe1_0041	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
TepRe1_0042	COG0444	Belongs to the ABC transporter superfamily
TepRe1_0043	COG4608	Belongs to the ABC transporter superfamily
TepRe1_0046	COG1012	belongs to the aldehyde dehydrogenase family
TepRe1_0049	COG2610	gluconate transmembrane transporter activity
TepRe1_0052	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
TepRe1_0052	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
TepRe1_0058	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
TepRe1_0059	COG1473	amidohydrolase
TepRe1_0060	COG1473	amidohydrolase
TepRe1_0067	COG1053	succinate dehydrogenase
TepRe1_0070	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
TepRe1_0070	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
TepRe1_0073	COG0084	hydrolase, TatD family'
TepRe1_0075	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
TepRe1_0076	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
TepRe1_0079	COG2385	sporulation resulting in formation of a cellular spore
TepRe1_0080	COG4466	Protein conserved in bacteria
TepRe1_0082	COG2340	Cysteine-rich secretory protein family
TepRe1_0085	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
TepRe1_0086	COG1802	Transcriptional regulator
TepRe1_0087	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
TepRe1_0088	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
TepRe1_0089	COG2088	sporulation resulting in formation of a cellular spore
TepRe1_0090	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
TepRe1_0091	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
TepRe1_0093	COG0193	aminoacyl-tRNA hydrolase activity
TepRe1_0097	COG2081	HI0933 family
TepRe1_0098	COG1396	sequence-specific DNA binding
TepRe1_0101	COG3443	Belongs to the bacterial solute-binding protein 9 family
TepRe1_0101	COG0803	Belongs to the bacterial solute-binding protein 9 family
TepRe1_0102	COG1121	(ABC) transporter
TepRe1_0103	COG1108	ABC-type Mn2 Zn2 transport systems permease components
TepRe1_0104	COG0735	belongs to the Fur family
TepRe1_0111	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
TepRe1_0114	COG4865	methylaspartate mutase activity
TepRe1_0115	COG3799	methylaspartate ammonia-lyase activity
TepRe1_0118	COG4086	secreted protein
TepRe1_0119	COG1181	Belongs to the D-alanine--D-alanine ligase family
TepRe1_0134	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
TepRe1_0135	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
TepRe1_0143	COG3829	transcription factor binding
TepRe1_0144	COG1362	aminopeptidase activity
TepRe1_0147	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
TepRe1_0148	COG1350	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
TepRe1_0150	COG2183	response to ionizing radiation
TepRe1_0153	COG0789	Transcriptional regulator
TepRe1_0154	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
TepRe1_0155	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
TepRe1_0156	COG0473	3-isopropylmalate dehydrogenase activity
TepRe1_0157	COG2302	S4 RNA-binding domain
TepRe1_0159	COG1785	Belongs to the alkaline phosphatase family
TepRe1_0162	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
TepRe1_0163	COG0561	phosphatase activity
TepRe1_0164	COG0534	Mate efflux family protein
TepRe1_0167	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
TepRe1_0169	COG2002	toxin-antitoxin pair type II binding
TepRe1_0170	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
TepRe1_0171	COG2244	polysaccharide biosynthetic process
TepRe1_0172	COG3956	TIGRFAM MazG family protein
TepRe1_0175	COG2385	sporulation resulting in formation of a cellular spore
TepRe1_0179	COG1098	S1 RNA binding domain
TepRe1_0183	COG1358	cellular component organization or biogenesis
TepRe1_0184	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
TepRe1_0186	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
TepRe1_0187	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
TepRe1_0189	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
TepRe1_0190	COG0088	Forms part of the polypeptide exit tunnel
TepRe1_0191	COG0089	rRNA binding
TepRe1_0192	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
TepRe1_0194	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
TepRe1_0195	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
TepRe1_0197	COG0255	Belongs to the universal ribosomal protein uL29 family
TepRe1_0198	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
TepRe1_0200	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
TepRe1_0201	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
TepRe1_0202	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
TepRe1_0203	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
TepRe1_0204	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
TepRe1_0205	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
TepRe1_0206	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
TepRe1_0207	COG0200	Binds to the 23S rRNA
TepRe1_0208	COG0201	protein transport
TepRe1_0209	COG0563	adenylate kinase activity
TepRe1_0210	COG0024	Methionine aminopeptidase
TepRe1_0212	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
TepRe1_0214	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
TepRe1_0215	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
TepRe1_0216	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
TepRe1_0217	COG0202	RNA polymerase activity
TepRe1_0218	COG0203	ribosomal protein L17
TepRe1_0219	COG1122	ATPase activity
TepRe1_0221	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
TepRe1_0222	COG0101	tRNA pseudouridine synthase activity
TepRe1_0223	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
TepRe1_0224	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
TepRe1_0225	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
TepRe1_0226	COG1160	GTP binding
TepRe1_0227	COG0534	Mate efflux family protein
TepRe1_0231	COG0492	ferredoxin-NADP+ reductase activity
TepRe1_0232	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
TepRe1_0235	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
TepRe1_0236	COG1846	Transcriptional regulator
TepRe1_0239	COG0309	Hydrogenase expression formation protein (HypE)
TepRe1_0241	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
TepRe1_0243	COG3069	C4-dicarboxylate transmembrane transporter activity
TepRe1_0246	COG0489	protein tyrosine kinase activity
TepRe1_0247	COG2894	cell division
TepRe1_0247	COG2894	cell division
TepRe1_0248	COG1342	Belongs to the UPF0251 family
TepRe1_0254	COG1472	Belongs to the glycosyl hydrolase 3 family
TepRe1_0256	COG1918	ferrous iron import across plasma membrane
TepRe1_0256	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
TepRe1_0260	COG0640	Transcriptional regulator
TepRe1_0269	COG0191	fructose-bisphosphate aldolase activity
TepRe1_0270	COG1063	alcohol dehydrogenase
TepRe1_0271	COG3716	PTS system mannose fructose sorbose family IID component
TepRe1_0272	COG3715	PTS system
TepRe1_0273	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
TepRe1_0280	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
TepRe1_0281	COG0789	Transcriptional regulator
TepRe1_0281	COG4978	Transcriptional regulator
TepRe1_0282	COG1238	metal cluster binding
TepRe1_0291	COG5012	cobalamin binding
TepRe1_0294	COG5012	cobalamin binding
TepRe1_0300	COG5012	cobalamin binding
TepRe1_0304	COG3404	Formiminotransferase-cyclodeaminase
TepRe1_0308	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
TepRe1_0310	COG5012	cobalamin binding
TepRe1_0313	COG1404	Belongs to the peptidase S8 family
TepRe1_0315	COG5002	protein histidine kinase activity
TepRe1_0317	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
TepRe1_0319	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
TepRe1_0320	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
TepRe1_0323	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
TepRe1_0326	COG0569	domain protein
TepRe1_0327	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
TepRe1_0329	COG1073	alpha beta
TepRe1_0329	COG2226	methyltransferase
TepRe1_0331	COG0747	negative chemotaxis
TepRe1_0332	COG0601	transmembrane transport
TepRe1_0334	COG4172	Belongs to the ABC transporter superfamily
TepRe1_0338	COG2217	Heavy metal translocating P-type atpase
TepRe1_0339	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
TepRe1_0343	COG0673	inositol 2-dehydrogenase activity
TepRe1_0344	COG0534	Mate efflux family protein
TepRe1_0345	COG0404	The glycine cleavage system catalyzes the degradation of glycine
TepRe1_0346	COG0509	glycine decarboxylation via glycine cleavage system
TepRe1_0347	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
TepRe1_0348	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
TepRe1_0349	COG3409	Peptidoglycan-binding domain 1 protein
TepRe1_0349	COG3773	Cell wall hydrolase
TepRe1_0351	COG1489	DNA binding
TepRe1_0355	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
TepRe1_0356	COG1773	rubredoxin
TepRe1_0357	COG1592	Rubrerythrin
TepRe1_0357	COG1773	rubredoxin
TepRe1_0358	COG1181	Belongs to the D-alanine--D-alanine ligase family
TepRe1_0363	COG2050	protein possibly involved in aromatic compounds catabolism
TepRe1_0364	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
TepRe1_0369	COG3858	chitin binding
TepRe1_0372	COG0493	'glutamate synthase
TepRe1_0372	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
TepRe1_0375	COG1924	4 iron, 4 sulfur cluster binding
TepRe1_0376	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
TepRe1_0377	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
TepRe1_0383	COG0768	penicillin binding
TepRe1_0385	COG0410	ABC transporter
TepRe1_0386	COG0411	ABC transporter
TepRe1_0388	COG0559	Belongs to the binding-protein-dependent transport system permease family
TepRe1_0392	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
TepRe1_0396	COG0482	sulfurtransferase activity
TepRe1_0400	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
TepRe1_0401	COG0066	3-isopropylmalate dehydratase activity
TepRe1_0406	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
TepRe1_0409	COG1053	succinate dehydrogenase
TepRe1_0417	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
TepRe1_0418	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
TepRe1_0419	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
TepRe1_0419	COG3608	succinylglutamate desuccinylase aspartoacylase
TepRe1_0420	COG3608	succinylglutamate desuccinylase aspartoacylase
TepRe1_0420	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
TepRe1_0424	COG1120	ATPase activity
TepRe1_0426	COG0709	Synthesizes selenophosphate from selenide and ATP
TepRe1_0427	COG0425	Belongs to the sulfur carrier protein TusA family
TepRe1_0428	COG1104	cysteine desulfurase activity
TepRe1_0434	COG0235	Class ii aldolase
TepRe1_0435	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
TepRe1_0437	COG1063	alcohol dehydrogenase
TepRe1_0438	COG0626	cystathionine gamma-synthase activity
TepRe1_0439	COG1070	Carbohydrate kinase
TepRe1_0440	COG0601	transmembrane transport
TepRe1_0441	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
TepRe1_0443	COG0444	Belongs to the ABC transporter superfamily
TepRe1_0444	COG4608	Belongs to the ABC transporter superfamily
TepRe1_0445	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
TepRe1_0446	COG3681	Belongs to the UPF0597 family
TepRe1_0448	COG0310	cobalt ion transport
TepRe1_0449	COG1122	ATPase activity
TepRe1_0450	COG1797	cobyrinic acid a,c-diamide synthase activity
TepRe1_0455	COG2242	protein methyltransferase activity
TepRe1_0457	COG2875	Belongs to the precorrin methyltransferase family
TepRe1_0460	COG2099	Precorrin-6x reductase
TepRe1_0461	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
TepRe1_0462	COG0181	hydroxymethylbilane synthase activity
TepRe1_0464	COG0113	porphobilinogen synthase activity
TepRe1_0465	COG1648	precorrin-2 dehydrogenase activity
TepRe1_0465	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
TepRe1_0466	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
TepRe1_0467	COG0363	glucosamine-6-phosphate deaminase activity
TepRe1_0470	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
TepRe1_0472	COG4753	response regulator
TepRe1_0472	COG2207	Transcriptional regulator
TepRe1_0473	COG2972	Histidine kinase
TepRe1_0474	COG1129	ABC transporter
TepRe1_0475	COG1129	ABC transporter
TepRe1_0476	COG1172	Belongs to the binding-protein-dependent transport system permease family
TepRe1_0480	COG0071	Belongs to the small heat shock protein (HSP20) family
TepRe1_0481	COG0736	holo-[acyl-carrier-protein] synthase activity
TepRe1_0482	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
TepRe1_0482	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
TepRe1_0483	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
TepRe1_0484	COG0864	Transcriptional regulator
TepRe1_0485	COG2337	Toxic component of a toxin-antitoxin (TA) module
TepRe1_0486	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
TepRe1_0487	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
TepRe1_0488	COG2362	D-Aminopeptidase
TepRe1_0490	COG0802	atpase or kinase
TepRe1_0491	COG1214	PFAM Peptidase M22, glycoprotease
TepRe1_0492	COG0456	acetyltransferase
TepRe1_0493	COG0110	maltose O-acetyltransferase activity
TepRe1_0495	COG0488	(ABC) transporter
TepRe1_0498	COG0281	malic enzyme
TepRe1_0502	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
TepRe1_0503	COG1285	pathogenesis
TepRe1_0504	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
TepRe1_0506	COG2252	PERMEase
TepRe1_0509	COG1269	ATP hydrolysis coupled proton transport
TepRe1_0510	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
TepRe1_0515	COG1394	ATPase activity, coupled to movement of substances
TepRe1_0532	COG0758	DNA mediated transformation
TepRe1_0542	COG2267	carboxylic ester hydrolase activity
TepRe1_0546	COG0673	inositol 2-dehydrogenase activity
TepRe1_0547	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
TepRe1_0548	COG1151	hydroxylamine reductase activity
TepRe1_0552	COG3404	Formiminotransferase-cyclodeaminase
TepRe1_0553	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
TepRe1_0555	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
TepRe1_0556	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
TepRe1_0557	COG1192	Involved in chromosome partitioning
TepRe1_0562	COG0509	glycine decarboxylation via glycine cleavage system
TepRe1_0567	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
TepRe1_0568	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
TepRe1_0571	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
TepRe1_0572	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
TepRe1_0573	COG0446	pyridine nucleotide-disulphide oxidoreductase
TepRe1_0577	COG2376	Dihydroxyacetone kinase
TepRe1_0579	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
TepRe1_0581	COG0432	Pfam Uncharacterised protein family UPF0047
TepRe1_0583	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
TepRe1_0584	COG0561	phosphatase activity
TepRe1_0585	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
TepRe1_0586	COG2084	Dehydrogenase
TepRe1_0587	COG0662	Cupin 2, conserved barrel domain protein
TepRe1_0587	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
TepRe1_0588	COG3835	regulator
TepRe1_0589	COG3842	ATPase activity
TepRe1_0591	COG0681	Belongs to the peptidase S26 family
TepRe1_0593	COG0012	GTP binding
TepRe1_0596	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
TepRe1_0598	COG0860	N-Acetylmuramoyl-L-alanine amidase
TepRe1_0599	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
TepRe1_0601	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
TepRe1_0602	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
TepRe1_0604	COG0544	peptidyl-prolyl cis-trans isomerase activity
TepRe1_0605	COG0740	serine-type endopeptidase activity
TepRe1_0606	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
TepRe1_0607	COG1067	ATP-dependent peptidase activity
TepRe1_0607	COG0470	DNA polymerase III
TepRe1_0608	COG3858	chitin binding
TepRe1_0608	COG1388	LysM domain
TepRe1_0610	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
TepRe1_0611	COG4496	protein, YerC YecD
TepRe1_0615	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
TepRe1_0615	COG3933	PFAM sigma-54 factor interaction domain-containing protein
TepRe1_0617	COG3414	Phosphotransferase system galactitol-specific IIB component
TepRe1_0618	COG3775	system Galactitol-specific IIC component
TepRe1_0619	COG1063	alcohol dehydrogenase
TepRe1_0620	COG1063	alcohol dehydrogenase
TepRe1_0626	COG0489	protein tyrosine kinase activity
TepRe1_0636	COG2390	Transcriptional regulator
TepRe1_0639	COG3732	PTS system glucitol sorbitol-specific
TepRe1_0642	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
TepRe1_0643	COG0022	dehydrogenase e1 component
TepRe1_0644	COG0508	dehydrogenase complex catalyzes the overall conversion of
TepRe1_0645	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
TepRe1_0646	COG1027	Aspartate ammonia-lyase
TepRe1_0647	COG0423	glycine-tRNA ligase activity
TepRe1_0648	COG1609	Transcriptional regulator
TepRe1_0649	COG1879	ABC-type sugar transport system periplasmic component
TepRe1_0650	COG1129	ABC transporter
TepRe1_0651	COG1172	Belongs to the binding-protein-dependent transport system permease family
TepRe1_0653	COG1402	creatininase
TepRe1_0654	COG0673	inositol 2-dehydrogenase activity
TepRe1_0655	COG1082	Xylose isomerase domain protein TIM barrel
TepRe1_0660	COG0124	histidyl-tRNA synthetase
TepRe1_0661	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
TepRe1_0664	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
TepRe1_0665	COG0107	imidazoleglycerol-phosphate synthase activity
TepRe1_0666	COG0140	phosphoribosyl-ATP diphosphatase activity
TepRe1_0666	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
TepRe1_0668	COG4399	Belongs to the UPF0754 family
TepRe1_0668	COG4399	Belongs to the UPF0754 family
TepRe1_0669	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
TepRe1_0670	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
TepRe1_0671	COG0291	Belongs to the bacterial ribosomal protein bL35 family
TepRe1_0672	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
TepRe1_0673	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
TepRe1_0674	COG0569	domain protein
TepRe1_0675	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
TepRe1_0677	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
TepRe1_0678	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
TepRe1_0678	COG0072	phenylalanine-tRNA ligase activity
TepRe1_0679	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
TepRe1_0680	COG1796	DNA polymerase
TepRe1_0680	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
TepRe1_0681	COG1193	negative regulation of DNA recombination
TepRe1_0684	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
TepRe1_0688	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
TepRe1_0689	COG3481	metal-dependent phosphohydrolase, HD sub domain
TepRe1_0690	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
TepRe1_0691	COG2222	sugar isomerase
TepRe1_0692	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
TepRe1_0695	COG0812	UDP-N-acetylmuramate dehydrogenase activity
TepRe1_0700	COG2239	Acts as a magnesium transporter
TepRe1_0701	COG2239	Acts as a magnesium transporter
TepRe1_0702	COG3679	Belongs to the UPF0342 family
TepRe1_0703	COG1660	Displays ATPase and GTPase activities
TepRe1_0704	COG0391	Required for morphogenesis under gluconeogenic growth conditions
TepRe1_0705	COG1481	regulation of sporulation
TepRe1_0706	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
TepRe1_0707	COG4109	DRTGG domain
TepRe1_0710	COG0205	6-phosphofructokinase activity
TepRe1_0712	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
TepRe1_0714	COG1307	EDD domain protein, DegV family
TepRe1_0718	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
TepRe1_0720	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
TepRe1_0720	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
TepRe1_0722	COG1129	ABC transporter
TepRe1_0723	COG1172	Belongs to the binding-protein-dependent transport system permease family
TepRe1_0724	COG0673	inositol 2-dehydrogenase activity
TepRe1_0725	COG1082	Xylose isomerase domain protein TIM barrel
TepRe1_0726	COG1940	carbohydrate kinase activity
TepRe1_0727	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
TepRe1_0733	COG1827	regulation of RNA biosynthetic process
TepRe1_0737	COG0697	spore germination
TepRe1_0738	COG0095	Lipoate-protein ligase
TepRe1_0739	COG1321	iron dependent repressor
TepRe1_0741	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
TepRe1_0742	COG1940	carbohydrate kinase activity
TepRe1_0743	COG1940	carbohydrate kinase activity
TepRe1_0744	COG0191	fructose-bisphosphate aldolase activity
TepRe1_0745	COG2222	sugar isomerase
TepRe1_0747	COG1879	ABC-type sugar transport system periplasmic component
TepRe1_0749	COG4211	Belongs to the binding-protein-dependent transport system permease family
TepRe1_0751	COG3693	PFAM glycoside hydrolase, family 10
TepRe1_0754	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
TepRe1_0768	COG0745	RESPONSE REGULATOR receiver
TepRe1_0769	COG2205	protein histidine kinase activity
TepRe1_0769	COG2770	Histidine kinase
TepRe1_0770	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
TepRe1_0772	COG2986	histidine ammonia-lyase
TepRe1_0773	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
TepRe1_0774	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
TepRe1_0776	COG1228	amidohydrolase
TepRe1_0777	COG3404	Formiminotransferase-cyclodeaminase
TepRe1_0781	COG4166	transmembrane transport
TepRe1_0782	COG0601	transmembrane transport
TepRe1_0783	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
TepRe1_0784	COG0444	Belongs to the ABC transporter superfamily
TepRe1_0785	COG4608	Belongs to the ABC transporter superfamily
TepRe1_0791	COG0438	transferase activity, transferring glycosyl groups
TepRe1_0799	COG1971	Probably functions as a manganese efflux pump
TepRe1_0800	COG4191	Histidine kinase
TepRe1_0801	COG0784	Response regulator, receiver
TepRe1_0805	COG1704	LemA family
TepRe1_0807	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
TepRe1_0808	COG1278	Cold shock
TepRe1_0818	COG0653	protein targeting
TepRe1_0820	COG0428	transporter
TepRe1_0821	COG1040	competence protein
TepRe1_0825	COG1256	bacterial-type flagellum assembly
TepRe1_0825	COG4786	Flagellar basal body rod
TepRe1_0826	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
TepRe1_0828	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
TepRe1_0829	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
TepRe1_0836	COG1598	PFAM Uncharacterised protein family UPF0150
TepRe1_0849	COG0012	GTP binding
TepRe1_0857	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
TepRe1_0858	COG1516	flagellar protein fliS
TepRe1_0864	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
TepRe1_0866	COG0840	transmembrane signaling receptor activity
TepRe1_0867	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
TepRe1_0869	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
TepRe1_0874	COG1162	GTPase activity
TepRe1_0892	COG3708	Transcriptional regulator
TepRe1_0892	COG2207	Transcriptional regulator
TepRe1_0901	COG0745	RESPONSE REGULATOR receiver
TepRe1_0903	COG1131	(ABC) transporter
TepRe1_0907	COG0488	(ABC) transporter
TepRe1_0915	COG3279	Response regulator of the LytR AlgR family
TepRe1_0922	COG3328	transposase activity
TepRe1_0949	COG1396	sequence-specific DNA binding
TepRe1_0950	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
TepRe1_0962	COG0745	RESPONSE REGULATOR receiver
TepRe1_0963	COG2205	protein histidine kinase activity
TepRe1_0967	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
TepRe1_0968	COG0534	Mate efflux family protein
TepRe1_0969	COG3583	domain protein
TepRe1_0969	COG3584	3D domain protein
TepRe1_0970	COG1686	Belongs to the peptidase S11 family
TepRe1_0972	COG2323	membrane
TepRe1_0974	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
TepRe1_0977	COG1205	dead DEAH box helicase
TepRe1_0977	COG1111	helicase
TepRe1_0978	COG3359	exonuclease
TepRe1_0980	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
TepRe1_0981	COG0573	inorganic phosphate transmembrane transporter activity
TepRe1_0982	COG0581	inorganic phosphate transmembrane transporter activity
TepRe1_0983	COG0745	RESPONSE REGULATOR receiver
TepRe1_0984	COG5002	protein histidine kinase activity
TepRe1_0985	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
TepRe1_0986	COG0704	Plays a role in the regulation of phosphate uptake
TepRe1_0987	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
TepRe1_0991	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
TepRe1_0995	COG1131	(ABC) transporter
TepRe1_0999	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
TepRe1_1000	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
TepRe1_1003	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
TepRe1_1005	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
TepRe1_1006	COG0406	alpha-ribazole phosphatase activity
TepRe1_1007	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
TepRe1_1011	COG1595	DNA-templated transcription, initiation
TepRe1_1015	COG2602	Beta-lactamase
TepRe1_1015	COG4219	Peptidase M56
TepRe1_1017	COG0860	N-Acetylmuramoyl-L-alanine amidase
TepRe1_1017	COG1388	LysM domain
TepRe1_1018	COG0557	exoribonuclease II activity
TepRe1_1021	COG1396	sequence-specific DNA binding
TepRe1_1031	COG0305	Participates in initiation and elongation during chromosome replication
TepRe1_1035	COG2052	Domain of unknown function (DUF370)
TepRe1_1036	COG0629	single-stranded DNA binding
TepRe1_1045	COG5484	DNA packaging
TepRe1_1046	COG1783	phage Terminase large subunit
TepRe1_1068	COG0116	Belongs to the methyltransferase superfamily
TepRe1_1069	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
TepRe1_1071	COG0671	phosphoesterase, PA-phosphatase related
TepRe1_1072	COG0436	Aminotransferase
TepRe1_1073	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
TepRe1_1074	COG0047	phosphoribosylformylglycinamidine synthase activity
TepRe1_1075	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
TepRe1_1076	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
TepRe1_1077	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
TepRe1_1078	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
TepRe1_1079	COG0138	bifunctional purine biosynthesis protein purh
TepRe1_1080	COG0151	Belongs to the GarS family
TepRe1_1081	COG1592	Rubrerythrin
TepRe1_1082	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
TepRe1_1084	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
TepRe1_1085	COG0658	competence protein
TepRe1_1085	COG2333	competence protein COMEC
TepRe1_1086	COG1466	dna polymerase III delta subunit
TepRe1_1087	COG0268	Binds directly to 16S ribosomal RNA
TepRe1_1089	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
TepRe1_1092	COG0481	GTPase activity
TepRe1_1093	COG0635	Involved in the biosynthesis of porphyrin-containing compound
TepRe1_1094	COG1420	regulation of RNA biosynthetic process
TepRe1_1095	COG0459	protein refolding
TepRe1_1097	COG0443	Heat shock 70 kDa protein
TepRe1_1098	COG0484	heat shock protein binding
TepRe1_1099	COG2264	protein methyltransferase activity
TepRe1_1100	COG1385	rRNA (uridine-N3-)-methyltransferase activity
TepRe1_1101	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
TepRe1_1102	COG0537	adenosine 5'-monophosphoramidase activity
TepRe1_1103	COG0828	Belongs to the bacterial ribosomal protein bS21 family
TepRe1_1104	COG1610	YqeY-like protein
TepRe1_1105	COG1030	water channel activity
TepRe1_1106	COG4864	UPF0365 protein
TepRe1_1110	COG1702	phosphate starvation-inducible protein PhoH
TepRe1_1111	COG1480	7TM receptor with intracellular HD hydrolase
TepRe1_1112	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
TepRe1_1113	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
TepRe1_1114	COG1470	cell adhesion involved in biofilm formation
TepRe1_1115	COG1381	Involved in DNA repair and RecF pathway recombination
TepRe1_1116	COG0517	IMP dehydrogenase activity
TepRe1_1117	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
TepRe1_1118	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
TepRe1_1118	COG0574	Belongs to the PEP-utilizing enzyme family
TepRe1_1119	COG0232	Belongs to the dGTPase family. Type 2 subfamily
TepRe1_1120	COG0358	DNA primase activity
TepRe1_1121	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
TepRe1_1123	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
TepRe1_1125	COG0328	RNA-DNA hybrid ribonuclease activity
TepRe1_1126	COG2703	oxygen carrier activity
TepRe1_1129	COG0612	Peptidase, M16
TepRe1_1130	COG0612	Peptidase, M16
TepRe1_1131	COG2001	Belongs to the MraZ family
TepRe1_1133	COG3116	cell division
TepRe1_1134	COG0768	penicillin binding
TepRe1_1136	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
TepRe1_1137	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
TepRe1_1138	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
TepRe1_1139	COG0772	Belongs to the SEDS family
TepRe1_1140	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
TepRe1_1141	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
TepRe1_1142	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
TepRe1_1145	COG3856	small basic protein
TepRe1_1147	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
TepRe1_1149	COG1191	sigma factor activity
TepRe1_1150	COG1191	sigma factor activity
TepRe1_1152	COG1873	PFAM PRC-barrel domain
TepRe1_1153	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
TepRe1_1154	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
TepRe1_1160	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
TepRe1_1161	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
TepRe1_1162	COG1254	Belongs to the acylphosphatase family
TepRe1_1163	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
TepRe1_1164	COG2201	protein-glutamate methylesterase activity
TepRe1_1165	COG3191	aminopeptidase activity
TepRe1_1167	COG3409	Peptidoglycan-binding domain 1 protein
TepRe1_1167	COG3773	Cell wall hydrolase
TepRe1_1168	COG1739	Uncharacterized protein family UPF0029
TepRe1_1169	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
TepRe1_1170	COG0217	transcriptional regulatory protein
TepRe1_1173	COG0632	four-way junction helicase activity
TepRe1_1174	COG2255	four-way junction helicase activity
TepRe1_1175	COG2385	sporulation resulting in formation of a cellular spore
TepRe1_1176	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
TepRe1_1179	COG1862	Preprotein translocase
TepRe1_1182	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
TepRe1_1183	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
TepRe1_1185	COG2030	dehydratase
TepRe1_1187	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
TepRe1_1189	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
TepRe1_1190	COG1028	Short-chain dehydrogenase reductase Sdr
TepRe1_1191	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
TepRe1_1192	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
TepRe1_1193	COG0571	ribonuclease III activity
TepRe1_1194	COG2359	stage V sporulation protein S
TepRe1_1195	COG1196	nuclear chromosome segregation
TepRe1_1196	COG0552	protein localization to endoplasmic reticulum
TepRe1_1197	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
TepRe1_1198	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
TepRe1_1199	COG0228	four-way junction DNA binding
TepRe1_1202	COG0336	Belongs to the RNA methyltransferase TrmD family
TepRe1_1203	COG0335	large ribosomal subunit rRNA binding
TepRe1_1205	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
TepRe1_1206	COG0792	nuclease activity
TepRe1_1207	COG0606	chelatase, subunit chli
TepRe1_1208	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
TepRe1_1209	COG0758	DNA mediated transformation
TepRe1_1210	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
TepRe1_1211	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
TepRe1_1212	COG4974	Belongs to the 'phage' integrase family
TepRe1_1213	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
TepRe1_1214	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
TepRe1_1216	COG1815	bacterial-type flagellum-dependent cell motility
TepRe1_1218	COG1677	Flagellar hook-basal body complex protein FliE
TepRe1_1219	COG1766	The M ring may be actively involved in energy transduction
TepRe1_1220	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
TepRe1_1222	COG1157	protein secretion by the type III secretion system
TepRe1_1226	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
TepRe1_1233	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
TepRe1_1234	COG1776	CheC inhibitor of MCP methylation
TepRe1_1234	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
TepRe1_1235	COG2201	protein-glutamate methylesterase activity
TepRe1_1237	COG1338	Plays a role in the flagellum-specific transport system
TepRe1_1238	COG1987	bacterial-type flagellum assembly
TepRe1_1239	COG1684	flagellar biosynthetic protein fliR
TepRe1_1240	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
TepRe1_1241	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
TepRe1_1242	COG1419	protein localization to endoplasmic reticulum
TepRe1_1243	COG0455	bacterial-type flagellum organization
TepRe1_1245	COG0643	Histidine kinase
TepRe1_1245	COG2198	Histidine kinase
TepRe1_1246	COG0835	chemotaxis
TepRe1_1247	COG1776	CheC inhibitor of MCP methylation
TepRe1_1248	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
TepRe1_1249	COG1191	sigma factor activity
TepRe1_1253	COG0628	permease
TepRe1_1254	COG0052	Belongs to the universal ribosomal protein uS2 family
TepRe1_1255	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
TepRe1_1256	COG0528	UMP kinase activity
TepRe1_1257	COG0233	cytoplasmic translational termination
TepRe1_1259	COG4589	Belongs to the CDS family
TepRe1_1260	COG0628	permease
TepRe1_1261	COG0750	zinc metalloprotease
TepRe1_1262	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
TepRe1_1263	COG0442	prolyl-tRNA aminoacylation
TepRe1_1265	COG2176	DNA-directed DNA polymerase activity
TepRe1_1267	COG0195	Participates in both transcription termination and antitermination
TepRe1_1268	COG2740	Nucleic-acid-binding protein implicated in transcription termination
TepRe1_1269	COG1358	cellular component organization or biogenesis
TepRe1_1270	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
TepRe1_1272	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
TepRe1_1273	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
TepRe1_1274	COG0196	riboflavin kinase activity
TepRe1_1275	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
TepRe1_1276	COG1185	polyribonucleotide nucleotidyltransferase activity
TepRe1_1277	COG0726	polysaccharide deacetylase
TepRe1_1278	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
TepRe1_1279	COG0756	dUTP diphosphatase activity
TepRe1_1280	COG1873	PFAM PRC-barrel domain
TepRe1_1281	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
TepRe1_1282	COG0740	serine-type endopeptidase activity
TepRe1_1284	COG1674	ftsk spoiiie
TepRe1_1285	COG1426	Protein conserved in bacteria
TepRe1_1286	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
TepRe1_1288	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
TepRe1_1290	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
TepRe1_1291	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
TepRe1_1293	COG1196	nuclear chromosome segregation
TepRe1_1297	COG1692	metallophosphoesterase
TepRe1_1298	COG2359	stage V sporulation protein S
TepRe1_1299	COG0613	PHP domain protein
TepRe1_1301	COG0674	pyruvate-flavodoxin oxidoreductase activity
TepRe1_1301	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
TepRe1_1302	COG1013	pyruvate-flavodoxin oxidoreductase activity
TepRe1_1306	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
TepRe1_1306	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
TepRe1_1307	COG1703	isobutyryl-CoA mutase activity
TepRe1_1308	COG0346	lactoylglutathione lyase activity
TepRe1_1309	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
TepRe1_1311	COG4770	biotin carboxylase activity
TepRe1_1312	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
TepRe1_1315	COG2720	vancomycin resistance protein
TepRe1_1318	COG1573	uracil-dna glycosylase
TepRe1_1319	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
TepRe1_1321	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
TepRe1_1322	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
TepRe1_1323	COG1923	regulation of RNA biosynthetic process
TepRe1_1324	COG0464	growth
TepRe1_1325	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
TepRe1_1328	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
TepRe1_1329	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
TepRe1_1333	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
TepRe1_1339	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
TepRe1_1341	COG1304	FMN binding
TepRe1_1342	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
TepRe1_1342	COG0539	negative regulation of cytoplasmic translation
TepRe1_1345	COG2081	HI0933 family
TepRe1_1347	COG1120	ATPase activity
TepRe1_1348	COG0010	Belongs to the arginase family
TepRe1_1349	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
TepRe1_1351	COG1187	pseudouridine synthase activity
TepRe1_1354	COG5012	cobalamin binding
TepRe1_1357	COG0445	tRNA wobble uridine modification
TepRe1_1358	COG1921	L-seryl-tRNASec selenium transferase activity
TepRe1_1361	COG3874	Sporulation protein YtfJ
TepRe1_1363	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
TepRe1_1365	COG0180	Tryptophanyl-tRNA synthetase
TepRe1_1366	COG1994	Peptidase M50
TepRe1_1367	COG0019	diaminopimelate decarboxylase activity
TepRe1_1368	COG1924	4 iron, 4 sulfur cluster binding
TepRe1_1373	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
TepRe1_1375	COG3360	Dodecin
TepRe1_1377	COG1191	sigma factor activity
TepRe1_1378	COG2172	sigma factor antagonist activity
TepRe1_1379	COG1366	Belongs to the anti-sigma-factor antagonist family
TepRe1_1380	COG1686	Belongs to the peptidase S11 family
TepRe1_1381	COG4974	Belongs to the 'phage' integrase family
TepRe1_1382	COG1300	Membrane
TepRe1_1383	COG1379	DNA repair
TepRe1_1386	COG0750	zinc metalloprotease
TepRe1_1387	COG0497	DNA recombination
TepRe1_1388	COG1438	arginine binding
TepRe1_1389	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
TepRe1_1391	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
TepRe1_1394	COG1722	exodeoxyribonuclease VII activity
TepRe1_1395	COG1570	exodeoxyribonuclease VII activity
TepRe1_1396	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
TepRe1_1399	COG1302	Protein conserved in bacteria
TepRe1_1407	COG3854	ATPases associated with a variety of cellular activities
TepRe1_1409	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
TepRe1_1410	COG0006	proline dipeptidase activity
TepRe1_1419	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
TepRe1_1420	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
TepRe1_1421	COG1191	sigma factor activity
TepRe1_1422	COG0768	penicillin binding
TepRe1_1423	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
TepRe1_1426	COG0735	belongs to the Fur family
TepRe1_1427	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
TepRe1_1428	COG3906	Belongs to the UPF0473 family
TepRe1_1429	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
TepRe1_1430	COG0667	Aldo Keto reductase
TepRe1_1431	COG4472	Bacterial protein of unknown function (DUF965)
TepRe1_1432	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
TepRe1_1434	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
TepRe1_1435	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
TepRe1_1436	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
TepRe1_1438	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
TepRe1_1439	COG1490	D-aminoacyl-tRNA deacylase activity
TepRe1_1440	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
TepRe1_1441	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
TepRe1_1442	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
TepRe1_1442	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
TepRe1_1445	COG0333	Belongs to the bacterial ribosomal protein bL32 family
TepRe1_1448	COG0280	phosphate acetyltransferase
TepRe1_1450	COG3480	Lon protease (S16) C-terminal proteolytic domain
TepRe1_1451	COG3314	Sporulation integral membrane protein YlbJ
TepRe1_1453	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
TepRe1_1454	COG0742	ribosomal rna small subunit methyltransferase
TepRe1_1456	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
TepRe1_1457	COG1461	Dihydroxyacetone kinase
TepRe1_1458	COG1302	Protein conserved in bacteria
TepRe1_1461	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
TepRe1_1462	COG0515	serine threonine protein kinase
TepRe1_1462	COG2815	serine threonine protein kinase
TepRe1_1463	COG0631	protein serine/threonine phosphatase activity
TepRe1_1464	COG0820	rRNA (adenine-C2-)-methyltransferase activity
TepRe1_1465	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
TepRe1_1465	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
TepRe1_1467	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
TepRe1_1469	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
TepRe1_1470	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
TepRe1_1472	COG0194	GDP metabolic process
TepRe1_1474	COG1561	YicC-like family, N-terminal region
TepRe1_1476	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
TepRe1_1477	COG0564	pseudouridine synthase activity
TepRe1_1478	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
TepRe1_1479	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
TepRe1_1481	COG3599	regulation of cell shape
TepRe1_1483	COG1799	cell septum assembly
TepRe1_1484	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
TepRe1_1486	COG0083	homoserine kinase activity
TepRe1_1487	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
TepRe1_1488	COG0460	homoserine dehydrogenase
TepRe1_1489	COG4492	Belongs to the UPF0735 family
TepRe1_1490	COG4347	Protein of unknown function (DUF1405)
TepRe1_1491	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
TepRe1_1492	COG0793	Belongs to the peptidase S41A family
TepRe1_1492	COG3409	Peptidoglycan-binding domain 1 protein
TepRe1_1493	COG2070	2-Nitropropane dioxygenase
TepRe1_1495	COG1136	(ABC) transporter
TepRe1_1497	COG1136	(ABC) transporter
TepRe1_1497	COG0577	efflux transmembrane transporter activity
TepRe1_1500	COG0525	valine-tRNA ligase activity
TepRe1_1501	COG1968	undecaprenyl-diphosphatase activity
TepRe1_1503	COG1555	photosystem II stabilization
TepRe1_1505	COG0719	Fe-S assembly protein
TepRe1_1506	COG1137	ATPase activity
TepRe1_1508	COG0495	leucyl-tRNA aminoacylation
TepRe1_1510	COG1316	TRANSCRIPTIONal
TepRe1_1511	COG1713	HD superfamily hydrolase involved in NAD metabolism
TepRe1_1512	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
TepRe1_1513	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
TepRe1_1515	COG0211	Belongs to the bacterial ribosomal protein bL27 family
TepRe1_1516	COG2868	ribosomal protein
TepRe1_1519	COG2959	enzyme of heme biosynthesis
TepRe1_1520	COG3773	Cell wall hydrolase
TepRe1_1520	COG3409	Peptidoglycan-binding domain 1 protein
TepRe1_1525	COG1530	ribonuclease E activity
TepRe1_1531	COG0772	Belongs to the SEDS family
TepRe1_1533	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
TepRe1_1534	COG2894	cell division
TepRe1_1535	COG0850	regulation of cytokinetic process
TepRe1_1536	COG0768	penicillin binding
TepRe1_1538	COG1792	Involved in formation and maintenance of cell shape
TepRe1_1539	COG1077	Cell shape determining protein MreB Mrl
TepRe1_1540	COG2003	Belongs to the UPF0758 family
TepRe1_1541	COG0424	maF-like protein
TepRe1_1545	COG1595	DNA-templated transcription, initiation
TepRe1_1551	COG1063	alcohol dehydrogenase
TepRe1_1555	COG1063	alcohol dehydrogenase
TepRe1_1558	COG3829	transcription factor binding
TepRe1_1558	COG3290	protein histidine kinase activity
TepRe1_1561	COG0840	transmembrane signaling receptor activity
TepRe1_1562	COG0700	Nucleoside recognition
TepRe1_1563	COG2715	membrane protein required for spore maturation
TepRe1_1564	COG0322	excinuclease ABC activity
TepRe1_1566	COG0686	Belongs to the AlaDH PNT family
TepRe1_1568	COG5002	protein histidine kinase activity
TepRe1_1569	COG0745	RESPONSE REGULATOR receiver
TepRe1_1573	COG1283	sodium-dependent phosphate transmembrane transporter activity
TepRe1_1574	COG1283	sodium-dependent phosphate transmembrane transporter activity
TepRe1_1577	COG1879	ABC-type sugar transport system periplasmic component
TepRe1_1578	COG4120	Belongs to the binding-protein-dependent transport system permease family
TepRe1_1580	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
TepRe1_1582	COG2721	sulfolactate sulfo-lyase activity
TepRe1_1583	COG0246	Mannitol dehydrogenase
TepRe1_1584	COG3718	enzyme involved in inositol metabolism
TepRe1_1588	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
TepRe1_1594	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
TepRe1_1598	COG0301	tRNA thio-modification
TepRe1_1607	COG0747	negative chemotaxis
TepRe1_1609	COG2707	UPF0756 membrane protein
TepRe1_1610	COG0741	lytic transglycosylase activity
TepRe1_1611	COG0237	dephospho-CoA kinase activity
TepRe1_1613	COG5662	AntiSigma factor
TepRe1_1614	COG1595	DNA-templated transcription, initiation
TepRe1_1618	COG0559	Belongs to the binding-protein-dependent transport system permease family
TepRe1_1620	COG0428	transporter
TepRe1_1621	COG0159	tryptophan synthase activity
TepRe1_1622	COG0133	tryptophan synthase activity
TepRe1_1627	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
TepRe1_1627	COG0512	Glutamine amidotransferase of anthranilate synthase
TepRe1_1628	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
TepRe1_1631	COG2723	6-phospho-beta-galactosidase activity
TepRe1_1632	COG2059	Chromate
TepRe1_1633	COG2059	Chromate
TepRe1_1634	COG1940	carbohydrate kinase activity
TepRe1_1635	COG0641	radical SAM
TepRe1_1637	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
TepRe1_1639	COG1447	Phosphotransferase system cellobiose-specific component IIA
TepRe1_1642	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
TepRe1_1644	COG1447	Phosphotransferase system cellobiose-specific component IIA
TepRe1_1645	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
TepRe1_1645	COG3933	PFAM sigma-54 factor interaction domain-containing protein
TepRe1_1646	COG0840	transmembrane signaling receptor activity
TepRe1_1647	COG3773	Cell wall hydrolase
TepRe1_1647	COG3409	Peptidoglycan-binding domain 1 protein
TepRe1_1648	COG0546	phosphoglycolate phosphatase activity
TepRe1_1649	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
TepRe1_1652	COG0556	nucleotide-excision repair
TepRe1_1654	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
TepRe1_1655	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
TepRe1_1656	COG0793	Belongs to the peptidase S41A family
TepRe1_1657	COG0741	lytic transglycosylase activity
TepRe1_1657	COG1196	nuclear chromosome segregation
TepRe1_1657	COG0739	heme binding
TepRe1_1658	COG2177	Part of the ABC transporter FtsEX involved in
TepRe1_1659	COG2884	Cell division ATP-binding protein ftsE
TepRe1_1660	COG0733	neurotransmitter:sodium symporter activity
TepRe1_1661	COG2152	Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose
TepRe1_1669	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
TepRe1_1670	COG3959	Transketolase, thiamine diphosphate binding domain
TepRe1_1671	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
TepRe1_1674	COG0438	transferase activity, transferring glycosyl groups
TepRe1_1677	COG0297	glycogen (starch) synthase activity
TepRe1_1680	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
TepRe1_1681	COG0363	glucosamine-6-phosphate deaminase activity
TepRe1_1682	COG0191	fructose-bisphosphate aldolase activity
TepRe1_1684	COG1376	ErfK ybiS ycfS ynhG family protein
TepRe1_1685	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
TepRe1_1686	COG1641	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
TepRe1_1687	COG1691	(AIR) carboxylase
TepRe1_1688	COG1606	tRNA processing
TepRe1_1689	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
TepRe1_1690	COG3858	chitin binding
TepRe1_1693	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
TepRe1_1694	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
TepRe1_1695	COG3716	PTS system mannose fructose sorbose family IID component
TepRe1_1696	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
TepRe1_1698	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
TepRe1_1699	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
TepRe1_1699	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
TepRe1_1700	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
TepRe1_1700	COG3933	PFAM sigma-54 factor interaction domain-containing protein
TepRe1_1703	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
TepRe1_1706	COG1980	fructose-bisphosphate aldolase activity
TepRe1_1717	COG0519	Catalyzes the synthesis of GMP from XMP
TepRe1_1717	COG0518	GMP synthase (glutamine-hydrolyzing) activity
TepRe1_1718	COG0577	efflux transmembrane transporter activity
TepRe1_1719	COG1136	(ABC) transporter
TepRe1_1720	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
TepRe1_1722	COG1131	(ABC) transporter
TepRe1_1723	COG1725	Transcriptional regulator
TepRe1_1724	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
TepRe1_1725	COG0456	acetyltransferase
TepRe1_1728	COG3715	PTS system
TepRe1_1731	COG1737	Transcriptional regulator
TepRe1_1732	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
TepRe1_1733	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
TepRe1_1734	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
TepRe1_1736	COG3829	transcription factor binding
TepRe1_1736	COG3290	protein histidine kinase activity
TepRe1_1737	COG2190	(PTS) system
TepRe1_1737	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
TepRe1_1737	COG1263	PTS System
TepRe1_1738	COG3711	transcriptional antiterminator
TepRe1_1739	COG1263	PTS System
TepRe1_1739	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
TepRe1_1739	COG2190	(PTS) system
TepRe1_1740	COG1802	Transcriptional regulator
TepRe1_1741	COG3718	enzyme involved in inositol metabolism
TepRe1_1743	COG1063	alcohol dehydrogenase
TepRe1_1744	COG0673	inositol 2-dehydrogenase activity
TepRe1_1745	COG0410	ABC transporter
TepRe1_1748	COG0559	Belongs to the binding-protein-dependent transport system permease family
TepRe1_1751	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
TepRe1_1753	COG1070	Carbohydrate kinase
TepRe1_1754	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
TepRe1_1755	COG0246	Mannitol dehydrogenase
TepRe1_1758	COG0728	peptidoglycan biosynthetic process
TepRe1_1764	COG0438	transferase activity, transferring glycosyl groups
TepRe1_1770	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
TepRe1_1771	COG0736	holo-[acyl-carrier-protein] synthase activity
TepRe1_1774	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
TepRe1_1776	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
TepRe1_1777	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
TepRe1_1786	COG0542	response to heat
TepRe1_1787	COG1803	Methylglyoxal synthase
TepRe1_1789	COG1136	(ABC) transporter
TepRe1_1789	COG0577	efflux transmembrane transporter activity
TepRe1_1790	COG1136	(ABC) transporter
TepRe1_1792	COG0585	pseudouridine synthase activity
TepRe1_1795	COG0726	polysaccharide deacetylase
TepRe1_1796	COG1187	pseudouridine synthase activity
TepRe1_1799	COG1028	Short-chain dehydrogenase reductase Sdr
TepRe1_1801	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
TepRe1_1803	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
TepRe1_1804	COG0281	malic enzyme
TepRe1_1806	COG0179	Fumarylacetoacetate (FAA) hydrolase
TepRe1_1807	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
TepRe1_1808	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
TepRe1_1809	COG0410	ABC transporter
TepRe1_1810	COG0411	ABC transporter
TepRe1_1812	COG0559	Belongs to the binding-protein-dependent transport system permease family
TepRe1_1816	COG0745	RESPONSE REGULATOR receiver
TepRe1_1819	COG1136	(ABC) transporter
TepRe1_1819	COG0577	efflux transmembrane transporter activity
TepRe1_1821	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
TepRe1_1822	COG1063	alcohol dehydrogenase
TepRe1_1824	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
TepRe1_1825	COG1024	Enoyl-CoA hydratase
TepRe1_1827	COG2030	dehydratase
TepRe1_1828	COG1082	Xylose isomerase domain protein TIM barrel
TepRe1_1830	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
TepRe1_1831	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
TepRe1_1832	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
TepRe1_1835	COG0800	Aldolase
TepRe1_1837	COG4211	Belongs to the binding-protein-dependent transport system permease family
TepRe1_1839	COG1879	ABC-type sugar transport system periplasmic component
TepRe1_1840	COG4213	ABC transporter substrate-binding protein
TepRe1_1841	COG3279	Response regulator of the LytR AlgR family
TepRe1_1842	COG3275	phosphorelay sensor kinase activity
TepRe1_1846	COG0840	transmembrane signaling receptor activity
TepRe1_1848	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
TepRe1_1849	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
TepRe1_1849	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
TepRe1_1851	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
TepRe1_1851	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
TepRe1_1854	COG3732	PTS system glucitol sorbitol-specific
TepRe1_1857	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
TepRe1_1859	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
TepRe1_1863	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
TepRe1_1865	COG1447	Phosphotransferase system cellobiose-specific component IIA
TepRe1_1867	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
TepRe1_1867	COG3933	PFAM sigma-54 factor interaction domain-containing protein
TepRe1_1876	COG3033	Beta-eliminating lyase
TepRe1_1880	COG3546	catalase activity
TepRe1_1881	COG2878	Part of a membrane complex involved in electron transport
TepRe1_1881	COG1245	4Fe-4S binding domain
TepRe1_1882	COG4657	Part of a membrane complex involved in electron transport
TepRe1_1883	COG4660	Part of a membrane complex involved in electron transport
TepRe1_1884	COG4659	FMN binding
TepRe1_1885	COG4658	electron transport chain
TepRe1_1886	COG4656	Part of a membrane complex involved in electron transport
TepRe1_1887	COG2116	formate transmembrane transporter activity
TepRe1_1891	COG4191	Histidine kinase
TepRe1_1896	COG2172	sigma factor antagonist activity
TepRe1_1897	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
TepRe1_1900	COG4608	Belongs to the ABC transporter superfamily
TepRe1_1901	COG0444	Belongs to the ABC transporter superfamily
TepRe1_1904	COG0747	negative chemotaxis
TepRe1_1905	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
TepRe1_1906	COG0154	amidase activity
TepRe1_1907	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
TepRe1_1911	COG1725	Transcriptional regulator
TepRe1_1914	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
TepRe1_1914	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
TepRe1_1920	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
TepRe1_1921	COG1646	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
TepRe1_1925	COG1301	dicarboxylic acid transport
TepRe1_1926	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
TepRe1_1927	COG0402	S-adenosylhomocysteine deaminase activity
TepRe1_1932	COG1215	transferase activity, transferring glycosyl groups
TepRe1_1935	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
TepRe1_1936	COG0028	Belongs to the TPP enzyme family
TepRe1_1937	COG0473	3-isopropylmalate dehydrogenase activity
TepRe1_1938	COG0066	3-isopropylmalate dehydratase activity
TepRe1_1939	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
TepRe1_1940	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
TepRe1_1941	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
TepRe1_1942	COG0440	acetolactate synthase activity
TepRe1_1943	COG0028	Belongs to the TPP enzyme family
TepRe1_1948	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
TepRe1_1949	COG1473	amidohydrolase
TepRe1_1950	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
TepRe1_1951	COG0129	dihydroxy-acid dehydratase activity
TepRe1_1952	COG1250	3-hydroxyacyl-CoA dehydrogenase
TepRe1_1953	COG2186	Transcriptional regulator
TepRe1_1954	COG3958	Transketolase
TepRe1_1955	COG3959	Transketolase, thiamine diphosphate binding domain
TepRe1_1959	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
TepRe1_1964	COG2972	Histidine kinase
TepRe1_1965	COG1126	abc transporter atp-binding protein
TepRe1_1966	COG0765	amino acid transport
TepRe1_1967	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
TepRe1_1968	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
TepRe1_1969	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
TepRe1_1970	COG1074	ATP-dependent DNA helicase activity
TepRe1_1971	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
TepRe1_1972	COG0148	phosphopyruvate hydratase activity
TepRe1_1974	COG0149	triose-phosphate isomerase activity
TepRe1_1975	COG0126	phosphoglycerate kinase activity
TepRe1_1976	COG2390	Transcriptional regulator
TepRe1_1978	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
TepRe1_1982	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
TepRe1_1983	COG0527	aspartate kinase activity
TepRe1_1984	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
TepRe1_1985	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
TepRe1_1988	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
TepRe1_1988	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
TepRe1_1988	COG1013	pyruvate-flavodoxin oxidoreductase activity
TepRe1_1988	COG0674	pyruvate-flavodoxin oxidoreductase activity
TepRe1_1989	COG1307	EDD domain protein, DegV family
TepRe1_1993	COG0295	cytidine deaminase activity
TepRe1_1994	COG2188	Transcriptional regulator
TepRe1_2001	COG0673	inositol 2-dehydrogenase activity
TepRe1_2004	COG3290	protein histidine kinase activity
TepRe1_2006	COG3279	Response regulator of the LytR AlgR family
TepRe1_2011	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
TepRe1_2012	COG4279	zinc finger
TepRe1_2014	COG4821	SIS domain
TepRe1_2017	COG3037	sugar-specific permease SgaT UlaA
TepRe1_2019	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
TepRe1_2020	COG3875	lactate racemase activity
TepRe1_2023	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
TepRe1_2024	COG0693	protein deglycase activity
TepRe1_2027	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
TepRe1_2028	COG3457	Alanine racemase
TepRe1_2029	COG0626	cystathionine gamma-synthase activity
TepRe1_2030	COG1735	metal-dependent hydrolase with the TIM-barrel fold
TepRe1_2033	COG3711	transcriptional antiterminator
TepRe1_2034	COG2188	Transcriptional regulator
TepRe1_2035	COG0561	phosphatase activity
TepRe1_2041	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
TepRe1_2043	COG5002	protein histidine kinase activity
TepRe1_2043	COG3850	Histidine kinase
TepRe1_2044	COG0745	RESPONSE REGULATOR receiver
TepRe1_2049	COG4810	utilization protein
TepRe1_2050	COG0346	lactoylglutathione lyase activity
TepRe1_2051	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
TepRe1_2052	COG1070	Carbohydrate kinase
TepRe1_2053	COG0667	Aldo Keto reductase
TepRe1_2054	COG1172	Belongs to the binding-protein-dependent transport system permease family
TepRe1_2055	COG1129	ABC transporter
TepRe1_2056	COG1879	ABC-type sugar transport system periplasmic component
TepRe1_2059	COG0306	phosphate transporter
TepRe1_2060	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
TepRe1_2064	COG5416	Lipopolysaccharide assembly protein A domain
TepRe1_2065	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
TepRe1_2068	COG4786	Flagellar basal body rod
TepRe1_2069	COG1077	Cell shape determining protein MreB Mrl
TepRe1_2070	COG1609	Transcriptional regulator
TepRe1_2072	COG2385	sporulation resulting in formation of a cellular spore
TepRe1_2073	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
TepRe1_2076	COG1394	ATPase activity, coupled to movement of substances
TepRe1_2078	COG1155	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit
TepRe1_2079	COG1436	Produces ATP from ADP in the presence of a proton gradient across the membrane
TepRe1_2081	COG1390	Produces ATP from ADP in the presence of a proton gradient across the membrane
TepRe1_2082	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
TepRe1_2083	COG1269	ATP hydrolysis coupled proton transport
TepRe1_2089	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
TepRe1_2090	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
TepRe1_2092	COG3959	Transketolase, thiamine diphosphate binding domain
TepRe1_2095	COG1653	transport
TepRe1_2096	COG2186	Transcriptional regulator
TepRe1_2102	COG2131	deaminase
TepRe1_2105	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
TepRe1_2107	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
TepRe1_2109	COG0673	inositol 2-dehydrogenase activity
TepRe1_2110	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
TepRe1_2111	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
TepRe1_2112	COG0698	ribose 5-phosphate isomerase
TepRe1_2114	COG0009	L-threonylcarbamoyladenylate synthase
TepRe1_2116	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
TepRe1_2117	COG3872	metal-dependent enzyme
TepRe1_2118	COG0254	rRNA binding
TepRe1_2122	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
TepRe1_2124	COG3885	ferrous iron binding
TepRe1_2124	COG2078	PFAM AMMECR1 domain protein
TepRe1_2126	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
TepRe1_2126	COG5322	oxidoreductase activity
TepRe1_2130	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
TepRe1_2131	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
TepRe1_2137	COG3835	regulator
TepRe1_2138	COG0840	transmembrane signaling receptor activity
TepRe1_2141	COG1929	Belongs to the glycerate kinase type-1 family
TepRe1_2142	COG1070	Carbohydrate kinase
TepRe1_2143	COG2610	gluconate transmembrane transporter activity
TepRe1_2145	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
TepRe1_2146	COG1737	Transcriptional regulator
TepRe1_2147	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
TepRe1_2148	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
TepRe1_2149	COG1028	Short-chain dehydrogenase reductase Sdr
TepRe1_2150	COG0037	tRNA processing
TepRe1_2155	COG0463	Glycosyl transferase, family 2
TepRe1_2156	COG0071	Belongs to the small heat shock protein (HSP20) family
TepRe1_2157	COG0222	ribosome binding
TepRe1_2158	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
TepRe1_2160	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
TepRe1_2161	COG0250	Participates in transcription elongation, termination and antitermination
TepRe1_2162	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
TepRe1_2163	COG0267	Belongs to the bacterial ribosomal protein bL33 family
TepRe1_2166	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
TepRe1_2168	COG3688	RNA-binding protein containing a PIN domain
TepRe1_2169	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
TepRe1_2171	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
TepRe1_2172	COG0215	cysteine-tRNA ligase activity
TepRe1_2173	COG1045	serine acetyltransferase
TepRe1_2174	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
TepRe1_2175	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
TepRe1_2176	COG4956	integral membrane protein (PIN domain superfamily)
TepRe1_2177	COG1329	Transcriptional regulator
TepRe1_2179	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
TepRe1_2180	COG0542	response to heat
TepRe1_2181	COG3869	Catalyzes the specific phosphorylation of arginine residues in
TepRe1_2182	COG3880	PFAM UvrB UvrC protein
TepRe1_2185	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
TepRe1_2186	COG0517	IMP dehydrogenase activity
TepRe1_2186	COG0516	GMP reductase activity
TepRe1_2188	COG3933	PFAM sigma-54 factor interaction domain-containing protein
TepRe1_2188	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
TepRe1_2189	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
TepRe1_2190	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
TepRe1_2193	COG1486	melibiose metabolic process
TepRe1_2194	COG1435	thymidine kinase activity
TepRe1_2199	COG1752	Esterase of the alpha-beta hydrolase superfamily
TepRe1_2200	COG1013	pyruvate-flavodoxin oxidoreductase activity
TepRe1_2201	COG0674	pyruvate-flavodoxin oxidoreductase activity
TepRe1_2202	COG1144	Oxidoreductase
TepRe1_2203	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
TepRe1_2210	COG1850	ribulose-bisphosphate carboxylase activity
TepRe1_2212	COG1070	Carbohydrate kinase
TepRe1_2213	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
TepRe1_2215	COG0446	pyridine nucleotide-disulphide oxidoreductase
TepRe1_2216	COG0579	oxidoreductase
TepRe1_2218	COG0698	ribose 5-phosphate isomerase
TepRe1_2219	COG1349	DNA-binding transcription factor activity
TepRe1_2220	COG1461	Dihydroxyacetone kinase
TepRe1_2221	COG2376	Dihydroxyacetone kinase
TepRe1_2222	COG0517	IMP dehydrogenase activity
TepRe1_2222	COG0516	GMP reductase activity
TepRe1_2225	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
TepRe1_2226	COG2814	Major facilitator Superfamily
TepRe1_2228	COG0280	phosphate acetyltransferase
TepRe1_2235	COG0655	NAD(P)H dehydrogenase (quinone) activity
TepRe1_2239	COG1131	(ABC) transporter
TepRe1_2240	COG0640	Transcriptional regulator
TepRe1_2243	COG2199	diguanylate cyclase activity
TepRe1_2243	COG2203	Gaf domain
TepRe1_2245	COG1447	Phosphotransferase system cellobiose-specific component IIA
TepRe1_2246	COG1446	asparaginase
TepRe1_2247	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
TepRe1_2249	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
TepRe1_2252	COG3711	transcriptional antiterminator
TepRe1_2253	COG0720	synthase
TepRe1_2254	COG1469	GTP cyclohydrolase I activity
TepRe1_2255	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
TepRe1_2256	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
TepRe1_2256	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
TepRe1_2258	COG2723	6-phospho-beta-galactosidase activity
TepRe1_2259	COG1902	pentaerythritol trinitrate reductase activity
TepRe1_2259	COG0446	pyridine nucleotide-disulphide oxidoreductase
TepRe1_2260	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
TepRe1_2263	COG3711	transcriptional antiterminator
TepRe1_2263	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
TepRe1_2265	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
TepRe1_2265	COG3697	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
TepRe1_2272	COG3875	lactate racemase activity
TepRe1_2275	COG3052	prosthetic group binding
TepRe1_2277	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
TepRe1_2278	COG0473	3-isopropylmalate dehydrogenase activity
TepRe1_2280	COG2828	Protein conserved in bacteria
TepRe1_2282	COG0583	DNA-binding transcription factor activity
TepRe1_2290	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
TepRe1_2294	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
TepRe1_2295	COG2610	gluconate transmembrane transporter activity
TepRe1_2335	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
TepRe1_2336	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
TepRe1_2337	COG0590	tRNA wobble adenosine to inosine editing
TepRe1_2338	COG1247	-acetyltransferase
TepRe1_2339	COG0726	polysaccharide deacetylase
TepRe1_2340	COG1550	Protein conserved in bacteria
TepRe1_2343	COG0765	amino acid transport
TepRe1_2344	COG2423	ornithine cyclodeaminase activity
TepRe1_2347	COG0733	neurotransmitter:sodium symporter activity
TepRe1_2348	COG3033	Beta-eliminating lyase
TepRe1_2349	COG3290	protein histidine kinase activity
TepRe1_2349	COG3829	transcription factor binding
TepRe1_2354	COG2186	Transcriptional regulator
TepRe1_2355	COG1620	l-lactate permease
TepRe1_2356	COG2086	electron transfer activity
TepRe1_2357	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
TepRe1_2358	COG0277	FAD linked oxidase domain protein
TepRe1_2362	COG1595	DNA-templated transcription, initiation
TepRe1_2364	COG4176	ABC-type proline glycine betaine transport system permease component
TepRe1_2367	COG0726	polysaccharide deacetylase
TepRe1_2368	COG0531	amino acid
TepRe1_2369	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
TepRe1_2371	COG1917	Cupin 2, conserved barrel domain protein
TepRe1_2371	COG1396	sequence-specific DNA binding
TepRe1_2391	COG3077	Addiction module antitoxin, RelB DinJ family
TepRe1_2400	COG5464	transposase or invertase
TepRe1_2402	COG4974	Belongs to the 'phage' integrase family
TepRe1_2403	COG0860	N-Acetylmuramoyl-L-alanine amidase
TepRe1_2404	COG4824	toxin secretion phage lysis holin
TepRe1_2422	COG0740	serine-type endopeptidase activity
TepRe1_2424	COG1802	Transcriptional regulator
TepRe1_2424	COG4626	Terminase
TepRe1_2431	COG3077	Addiction module antitoxin, RelB DinJ family
TepRe1_2432	COG3041	Addiction module toxin RelE StbE family
TepRe1_2439	COG4133	protoheme IX ABC transporter activity
TepRe1_2443	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
TepRe1_2443	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
TepRe1_2454	COG0497	DNA recombination
TepRe1_2456	COG2348	transferase activity, transferring amino-acyl groups
TepRe1_2458	COG0504	CTP synthase activity
TepRe1_2459	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
TepRe1_2460	COG0018	arginyl-trna synthetase
TepRe1_2462	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
TepRe1_2463	COG0284	orotidine-5'-phosphate decarboxylase activity
TepRe1_2464	COG0167	dihydroorotate dehydrogenase activity
TepRe1_2465	COG0543	2 iron, 2 sulfur cluster binding
TepRe1_2467	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
TepRe1_2468	COG0540	Belongs to the ATCase OTCase family
TepRe1_2469	COG1605	Chorismate mutase
TepRe1_2469	COG0077	Prephenate dehydratase
TepRe1_2470	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
TepRe1_2471	COG0287	Prephenate dehydrogenase
TepRe1_2472	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
TepRe1_2473	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
TepRe1_2474	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
TepRe1_2476	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
TepRe1_2477	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
TepRe1_2478	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
TepRe1_2479	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
TepRe1_2480	COG3409	Peptidoglycan-binding domain 1 protein
TepRe1_2480	COG3773	Cell wall hydrolase
TepRe1_2482	COG1982	Orn Lys Arg decarboxylase major
TepRe1_2486	COG3830	Belongs to the UPF0237 family
TepRe1_2492	COG2059	Chromate
TepRe1_2493	COG2059	Chromate
TepRe1_2494	COG1115	amino acid carrier protein
TepRe1_2499	COG0534	Mate efflux family protein
TepRe1_2500	COG2207	Transcriptional regulator
TepRe1_2500	COG1917	Cupin 2, conserved barrel domain protein
TepRe1_2503	COG0514	ATP-dependent DNA helicase (RecQ)
TepRe1_2507	COG1388	LysM domain
TepRe1_2516	COG1215	transferase activity, transferring glycosyl groups
TepRe1_2521	COG0440	acetolactate synthase activity
TepRe1_2522	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
TepRe1_2525	COG2201	protein-glutamate methylesterase activity
TepRe1_2527	COG2197	response regulator
TepRe1_2528	COG0835	chemotaxis
TepRe1_2528	COG0784	Response regulator, receiver
TepRe1_2531	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
TepRe1_2532	COG1802	Transcriptional regulator
TepRe1_2533	COG0840	transmembrane signaling receptor activity
TepRe1_2534	COG4251	negative regulation of phosphorylation
TepRe1_2536	COG3933	PFAM sigma-54 factor interaction domain-containing protein
TepRe1_2536	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
TepRe1_2537	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
TepRe1_2537	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
TepRe1_2538	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
TepRe1_2539	COG3715	PTS system
TepRe1_2540	COG3716	PTS system mannose fructose sorbose family IID component
TepRe1_2541	COG1063	alcohol dehydrogenase
TepRe1_2544	COG0446	pyridine nucleotide-disulphide oxidoreductase
TepRe1_2546	COG0840	transmembrane signaling receptor activity
TepRe1_2551	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
TepRe1_2552	COG1307	EDD domain protein, DegV family
TepRe1_2555	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
TepRe1_2561	COG1671	Belongs to the UPF0178 family
TepRe1_2564	COG1408	metallophosphoesterase
TepRe1_2565	COG0708	Exodeoxyribonuclease III
TepRe1_2568	COG0425	Belongs to the sulfur carrier protein TusA family
TepRe1_2568	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
TepRe1_2569	COG2391	methyltransferase activity
TepRe1_2570	COG0583	DNA-binding transcription factor activity
TepRe1_2575	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
TepRe1_2575	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
TepRe1_2575	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
TepRe1_2576	COG1105	Belongs to the carbohydrate kinase PfkB family
TepRe1_2577	COG1349	DNA-binding transcription factor activity
TepRe1_2578	COG1151	hydroxylamine reductase activity
TepRe1_2581	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
TepRe1_2584	COG3177	Filamentation induced by cAMP protein fic
TepRe1_2596	COG0646	methionine synthase
TepRe1_2596	COG1410	methionine synthase
TepRe1_2598	COG0765	amino acid transport
TepRe1_2599	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
TepRe1_2600	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
TepRe1_2605	COG5002	protein histidine kinase activity
TepRe1_2606	COG0745	RESPONSE REGULATOR receiver
TepRe1_2609	COG0739	heme binding
TepRe1_2611	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
TepRe1_2613	COG0305	Participates in initiation and elongation during chromosome replication
TepRe1_2615	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
TepRe1_2616	COG4241	membrane
TepRe1_2619	COG0360	Binds together with S18 to 16S ribosomal RNA
TepRe1_2620	COG4481	Protein conserved in bacteria
TepRe1_2621	COG0668	transmembrane transport
TepRe1_2624	COG3949	Membrane
TepRe1_2627	COG1388	LysM domain
TepRe1_2627	COG4942	peptidase
TepRe1_2630	COG1943	Transposase
TepRe1_2631	COG1475	DNA binding
TepRe1_2632	COG1192	Involved in chromosome partitioning
TepRe1_2634	COG0357	Ribosomal RNA small subunit methyltransferase G
TepRe1_2635	COG0445	tRNA wobble uridine modification
TepRe1_2636	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
TepRe1_2637	COG1847	R3H domain protein
TepRe1_2638	COG0706	membrane insertase activity
TepRe1_2639	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
TepRe1_2640	COG0594	ribonuclease P activity
TepRe1_2641	COG0230	Belongs to the bacterial ribosomal protein bL34 family