locus-tag class description Tbon_00010 PF00582 Universal stress protein family Tbon_00015 PF02080 TrkA-C domain Tbon_00015 PF02254 TrkA-N domain Tbon_00020 PF02080 TrkA-C domain Tbon_00020 PF02254 TrkA-N domain Tbon_00025 PF01842 ACT domain Tbon_00025 PF01817 Chorismate mutase type II Tbon_00025 PF00800 Prephenate dehydratase Tbon_00050 PF13478 XdhC Rossmann domain Tbon_00050 PF02625 XdhC and CoxI family Tbon_00055 PF02416 mttA/Hcf106 family Tbon_00060 PF10576 Iron-sulfur binding domain of endonuclease III Tbon_00060 PF00633 Helix-hairpin-helix motif Tbon_00060 PF00730 HhH-GPD superfamily base excision DNA repair protein Tbon_00080 PF01202 Shikimate kinase Tbon_00085 PF00378 Enoyl-CoA hydratase/isomerase Tbon_00095 PF00561 alpha/beta hydrolase fold Tbon_00100 PF00561 alpha/beta hydrolase fold Tbon_00120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tbon_00120 PF03466 LysR substrate binding domain Tbon_00130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tbon_00135 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Tbon_00135 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Tbon_00135 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Tbon_00140 PF00571 CBS domain Tbon_00140 PF00478 IMP dehydrogenase / GMP reductase domain Tbon_00145 PF11871 Domain of unknown function (DUF3391) Tbon_00145 PF01966 HD domain Tbon_00170 PF00155 Aminotransferase class I and II Tbon_00170 PF00392 Bacterial regulatory proteins, gntR family Tbon_00175 PF13335 Magnesium chelatase, subunit ChlI C-terminal Tbon_00175 PF01078 Magnesium chelatase, subunit ChlI Tbon_00180 PF02824 TGS domain Tbon_00180 PF04607 Region found in RelA / SpoT proteins Tbon_00180 PF13291 ACT domain Tbon_00185 PF13393 Histidyl-tRNA synthetase Tbon_00185 PF03129 Anticodon binding domain Tbon_00190 PF00684 DnaJ central domain Tbon_00190 PF01556 DnaJ C terminal domain Tbon_00190 PF00226 DnaJ domain Tbon_00210 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Tbon_00210 PF02154 Flagellar motor switch protein FliM Tbon_00215 PF01584 CheW-like domain Tbon_00220 PF01584 CheW-like domain Tbon_00220 PF02895 Signal transducing histidine kinase, homodimeric domain Tbon_00220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tbon_00220 PF01627 Hpt domain Tbon_00220 PF07194 P2 response regulator binding domain Tbon_00230 PF03975 CheD chemotactic sensory transduction Tbon_00235 PF00072 Response regulator receiver domain Tbon_00240 PF01339 CheB methylesterase Tbon_00240 PF00072 Response regulator receiver domain Tbon_00245 PF01739 CheR methyltransferase, SAM binding domain Tbon_00245 PF03705 CheR methyltransferase, all-alpha domain Tbon_00260 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Tbon_00260 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Tbon_00265 PF02515 CoA-transferase family III Tbon_00270 PF02515 CoA-transferase family III Tbon_00275 PF16177 Acetyl-coenzyme A synthetase N-terminus Tbon_00275 PF00501 AMP-binding enzyme Tbon_00275 PF13193 AMP-binding enzyme C-terminal domain Tbon_00280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tbon_00280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tbon_00280 PF02770 Acyl-CoA dehydrogenase, middle domain Tbon_00305 PF01551 Peptidase family M23 Tbon_00305 PF01476 LysM domain Tbon_00310 PF00296 Luciferase-like monooxygenase Tbon_00330 PF00561 alpha/beta hydrolase fold Tbon_00340 PF01713 Smr domain Tbon_00340 PF00488 MutS domain V Tbon_00345 PF00004 ATPase family associated with various cellular activities (AAA) Tbon_00345 PF16193 AAA C-terminal domain Tbon_00345 PF12002 MgsA AAA+ ATPase C terminal Tbon_00355 PF00300 Histidine phosphatase superfamily (branch 1) Tbon_00370 PF07728 AAA domain (dynein-related subfamily) Tbon_00370 PF08406 CbbQ/NirQ/NorQ C-terminal Tbon_00375 PF01121 Dephospho-CoA kinase Tbon_00390 PF00378 Enoyl-CoA hydratase/isomerase Tbon_00400 PF00291 Pyridoxal-phosphate dependent enzyme Tbon_00410 PF02597 ThiS family Tbon_00415 PF00501 AMP-binding enzyme Tbon_00420 PF00753 Metallo-beta-lactamase superfamily Tbon_00425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tbon_00425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tbon_00425 PF02770 Acyl-CoA dehydrogenase, middle domain Tbon_00455 PF01938 TRAM domain Tbon_00455 PF04055 Radical SAM superfamily Tbon_00455 PF00919 Uncharacterized protein family UPF0004 Tbon_00465 PF00293 NUDIX domain Tbon_00480 PF00528 Binding-protein-dependent transport system inner membrane component Tbon_00485 PF12857 TOBE-like domain Tbon_00485 PF00005 ABC transporter Tbon_00510 PF00291 Pyridoxal-phosphate dependent enzyme Tbon_00525 PF01063 Amino-transferase class IV Tbon_00545 PF00113 Enolase, C-terminal TIM barrel domain Tbon_00545 PF03952 Enolase, N-terminal domain Tbon_00550 PF01327 Polypeptide deformylase Tbon_00560 PF01488 Shikimate / quinate 5-dehydrogenase Tbon_00560 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Tbon_00560 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Tbon_00565 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Tbon_00565 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Tbon_00570 PF00271 Helicase conserved C-terminal domain Tbon_00570 PF00270 DEAD/DEAH box helicase Tbon_00570 PF08494 DEAD/H associated Tbon_00580 PF01638 HxlR-like helix-turn-helix Tbon_00585 PF04055 Radical SAM superfamily Tbon_00590 PF00296 Luciferase-like monooxygenase Tbon_00605 PF01212 Beta-eliminating lyase Tbon_00630 PF00440 Bacterial regulatory proteins, tetR family Tbon_00635 PF00440 Bacterial regulatory proteins, tetR family Tbon_00640 PF02580 D-Tyr-tRNA(Tyr) deacylase Tbon_00645 PF03129 Anticodon binding domain Tbon_00645 PF04073 Aminoacyl-tRNA editing domain Tbon_00645 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Tbon_00650 PF00743 Flavin-binding monooxygenase-like Tbon_00665 PF00330 Aconitase family (aconitate hydratase) Tbon_00665 PF00694 Aconitase C-terminal domain Tbon_00670 PF00180 Isocitrate/isopropylmalate dehydrogenase Tbon_00680 PF13307 Helicase C-terminal domain Tbon_00680 PF04851 Type III restriction enzyme, res subunit Tbon_00685 PF00679 Elongation factor G C-terminus Tbon_00685 PF14492 Elongation Factor G, domain II Tbon_00685 PF03764 Elongation factor G, domain IV Tbon_00685 PF00009 Elongation factor Tu GTP binding domain Tbon_00685 PF03144 Elongation factor Tu domain 2 Tbon_00705 PF02163 Peptidase family M50 Tbon_00710 PF02153 Prephenate dehydrogenase Tbon_00715 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Tbon_00720 PF00625 Guanylate kinase Tbon_00740 PF08546 Ketopantoate reductase PanE/ApbA C terminal Tbon_00740 PF02558 Ketopantoate reductase PanE/ApbA Tbon_00780 PF00005 ABC transporter Tbon_00780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tbon_00785 PF00005 ABC transporter Tbon_00785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tbon_00790 PF00296 Luciferase-like monooxygenase Tbon_00795 PF00069 Protein kinase domain Tbon_00795 PF03793 PASTA domain Tbon_00800 PF01098 Cell cycle protein Tbon_00805 PF01842 ACT domain Tbon_00805 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Tbon_00805 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Tbon_00810 PF00266 Aminotransferase class-V Tbon_00815 PF02629 CoA binding domain Tbon_00815 PF06971 Putative DNA-binding protein N-terminus Tbon_00825 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Tbon_00830 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Tbon_00830 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Tbon_00835 PF02874 ATP synthase alpha/beta family, beta-barrel domain Tbon_00835 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tbon_00840 PF13419 Haloacid dehalogenase-like hydrolase Tbon_00845 PF00231 ATP synthase Tbon_00850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tbon_00850 PF00306 ATP synthase alpha/beta chain, C terminal domain Tbon_00850 PF02874 ATP synthase alpha/beta family, beta-barrel domain Tbon_00855 PF00213 ATP synthase delta (OSCP) subunit Tbon_00860 PF00430 ATP synthase B/B' CF(0) Tbon_00865 PF00137 ATP synthase subunit C Tbon_00870 PF00119 ATP synthase A chain Tbon_00880 PF02577 Bifunctional nuclease Tbon_00895 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Tbon_00900 PF01177 Asp/Glu/Hydantoin racemase Tbon_00905 PF04029 2-phosphosulpholactate phosphatase Tbon_00920 PF17863 AAA lid domain Tbon_00920 PF07726 ATPase family associated with various cellular activities (AAA) Tbon_00930 PF01584 CheW-like domain Tbon_00935 PF01475 Ferric uptake regulator family Tbon_00950 PF01923 Cobalamin adenosyltransferase Tbon_00965 PF03109 ABC1 family Tbon_00970 PF00684 DnaJ central domain Tbon_00970 PF01556 DnaJ C terminal domain Tbon_00970 PF00226 DnaJ domain Tbon_00975 PF16295 Tetracyclin repressor-like, C-terminal domain Tbon_00975 PF00440 Bacterial regulatory proteins, tetR family Tbon_00980 PF00156 Phosphoribosyl transferase domain Tbon_00985 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Tbon_00985 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Tbon_00990 PF01979 Amidohydrolase family Tbon_00995 PF00117 Glutamine amidotransferase class-I Tbon_00995 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Tbon_01005 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Tbon_01005 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Tbon_01005 PF02142 MGS-like domain Tbon_01010 PF00970 Oxidoreductase FAD-binding domain Tbon_01010 PF00175 Oxidoreductase NAD-binding domain Tbon_01010 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Tbon_01015 PF00994 Probable molybdopterin binding domain Tbon_01015 PF02464 Competence-damaged protein Tbon_01020 PF02567 Phenazine biosynthesis-like protein Tbon_01030 PF00501 AMP-binding enzyme Tbon_01030 PF13193 AMP-binding enzyme C-terminal domain Tbon_01035 PF02386 Cation transport protein Tbon_01040 PF02254 TrkA-N domain Tbon_01040 PF02080 TrkA-C domain Tbon_01060 PF03120 NAD-dependent DNA ligase OB-fold domain Tbon_01060 PF01653 NAD-dependent DNA ligase adenylation domain Tbon_01060 PF00533 BRCA1 C Terminus (BRCT) domain Tbon_01060 PF12826 Helix-hairpin-helix motif Tbon_01060 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Tbon_01080 PF13361 UvrD-like helicase C-terminal domain Tbon_01080 PF00580 UvrD/REP helicase N-terminal domain Tbon_01085 PF00924 Mechanosensitive ion channel Tbon_01090 PF01638 HxlR-like helix-turn-helix Tbon_01095 PF00920 Dehydratase family Tbon_01105 PF00289 Biotin carboxylase, N-terminal domain Tbon_01105 PF00364 Biotin-requiring enzyme Tbon_01105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Tbon_01105 PF02785 Biotin carboxylase C-terminal domain Tbon_01135 PF10609 NUBPL iron-transfer P-loop NTPase Tbon_01140 PF00437 Type II/IV secretion system protein Tbon_01165 PF01047 MarR family Tbon_01170 PF00296 Luciferase-like monooxygenase Tbon_01175 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Tbon_01175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tbon_01175 PF00205 Thiamine pyrophosphate enzyme, central domain Tbon_01180 PF00248 Aldo/keto reductase family Tbon_01185 PF02446 4-alpha-glucanotransferase Tbon_01190 PF00342 Phosphoglucose isomerase Tbon_01205 PF00581 Rhodanese-like domain Tbon_01210 PF00905 Penicillin binding protein transpeptidase domain Tbon_01210 PF00912 Transglycosylase Tbon_01215 PF02686 Glu-tRNAGln amidotransferase C subunit Tbon_01220 PF01425 Amidase Tbon_01230 PF01425 Amidase Tbon_01235 PF10119 Predicted methyltransferase regulatory domain Tbon_01235 PF13847 Methyltransferase domain Tbon_01240 PF00155 Aminotransferase class I and II Tbon_01250 PF05199 GMC oxidoreductase Tbon_01250 PF00732 GMC oxidoreductase Tbon_01255 PF00583 Acetyltransferase (GNAT) family Tbon_01255 PF13380 CoA binding domain Tbon_01255 PF13607 Succinyl-CoA ligase like flavodoxin domain Tbon_01265 PF00196 Bacterial regulatory proteins, luxR family Tbon_01265 PF00072 Response regulator receiver domain Tbon_01270 PF02545 Maf-like protein Tbon_01275 PF01938 TRAM domain Tbon_01275 PF05958 tRNA (Uracil-5-)-methyltransferase Tbon_01300 PF00549 CoA-ligase Tbon_01300 PF02629 CoA binding domain Tbon_01315 PF02515 CoA-transferase family III Tbon_01320 PF13847 Methyltransferase domain Tbon_01335 PF02511 Thymidylate synthase complementing protein Tbon_01350 PF03099 Biotin/lipoate A/B protein ligase family Tbon_01355 PF01709 Transcriptional regulator Tbon_01390 PF03144 Elongation factor Tu domain 2 Tbon_01390 PF00009 Elongation factor Tu GTP binding domain Tbon_01390 PF03143 Elongation factor Tu C-terminal domain Tbon_01395 PF00471 Ribosomal protein L33 Tbon_01400 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Tbon_01405 PF00467 KOW motif Tbon_01405 PF02357 Transcription termination factor nusG Tbon_01415 PF00528 Binding-protein-dependent transport system inner membrane component Tbon_01425 PF03946 Ribosomal protein L11, N-terminal domain Tbon_01425 PF00298 Ribosomal protein L11, RNA binding domain Tbon_01430 PF00687 Ribosomal protein L1p/L10e family Tbon_01450 PF00005 ABC transporter Tbon_01465 PF00633 Helix-hairpin-helix motif Tbon_01465 PF00730 HhH-GPD superfamily base excision DNA repair protein Tbon_01465 PF10576 Iron-sulfur binding domain of endonuclease III Tbon_01485 PF00075 RNase H Tbon_01495 PF02463 RecF/RecN/SMC N terminal domain Tbon_01500 PF01513 ATP-NAD kinase Tbon_01505 PF01728 FtsJ-like methyltransferase Tbon_01505 PF01479 S4 domain Tbon_01510 PF00205 Thiamine pyrophosphate enzyme, central domain Tbon_01510 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tbon_01510 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Tbon_01515 PF01432 Peptidase family M3 Tbon_01545 PF00156 Phosphoribosyl transferase domain Tbon_01550 PF01008 Initiation factor 2 subunit family Tbon_01555 PF01048 Phosphorylase superfamily Tbon_01560 PF00294 pfkB family carbohydrate kinase Tbon_01570 PF05221 S-adenosyl-L-homocysteine hydrolase Tbon_01570 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Tbon_01575 PF10576 Iron-sulfur binding domain of endonuclease III Tbon_01575 PF00633 Helix-hairpin-helix motif Tbon_01575 PF00730 HhH-GPD superfamily base excision DNA repair protein Tbon_01580 PF00378 Enoyl-CoA hydratase/isomerase Tbon_01590 PF01979 Amidohydrolase family Tbon_01600 PF08447 PAS fold Tbon_01600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tbon_01600 PF13426 PAS domain Tbon_01610 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Tbon_01630 PF12704 MacB-like periplasmic core domain Tbon_01630 PF00005 ABC transporter Tbon_01630 PF02687 FtsX-like permease family Tbon_01635 PF12704 MacB-like periplasmic core domain Tbon_01635 PF02687 FtsX-like permease family Tbon_01635 PF00005 ABC transporter Tbon_01650 PF14579 Helix-hairpin-helix motif Tbon_01650 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Tbon_01650 PF02811 PHP domain Tbon_01650 PF07733 Bacterial DNA polymerase III alpha NTPase domain Tbon_01660 PF01687 Riboflavin kinase Tbon_01660 PF06574 FAD synthetase Tbon_01665 PF00579 tRNA synthetases class I (W and Y) Tbon_01665 PF01479 S4 domain Tbon_01690 PF13247 4Fe-4S dicluster domain Tbon_01700 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Tbon_01700 PF00384 Molybdopterin oxidoreductase Tbon_01700 PF01568 Molydopterin dinucleotide binding domain Tbon_01720 PF00378 Enoyl-CoA hydratase/isomerase Tbon_01730 PF03747 ADP-ribosylglycohydrolase Tbon_01735 PF00271 Helicase conserved C-terminal domain Tbon_01735 PF00176 SNF2 family N-terminal domain Tbon_01745 PF00364 Biotin-requiring enzyme Tbon_01750 PF00682 HMGL-like Tbon_01750 PF00364 Biotin-requiring enzyme Tbon_01750 PF02436 Conserved carboxylase domain Tbon_01760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tbon_01760 PF02770 Acyl-CoA dehydrogenase, middle domain Tbon_01760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tbon_01780 PF02620 Large ribosomal RNA subunit accumulation protein YceD Tbon_01790 PF00698 Acyl transferase domain Tbon_01800 PF01029 NusB family Tbon_01805 PF00550 Phosphopantetheine attachment site Tbon_01810 PF02416 mttA/Hcf106 family Tbon_01815 PF00902 Sec-independent protein translocase protein (TatC) Tbon_01825 PF03167 Uracil DNA glycosylase superfamily Tbon_01830 PF00753 Metallo-beta-lactamase superfamily Tbon_01830 PF17770 Ribonuclease J C-terminal domain Tbon_01830 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Tbon_01835 PF17854 FtsK alpha domain Tbon_01835 PF01580 FtsK/SpoIIIE family Tbon_01835 PF09397 Ftsk gamma domain Tbon_01840 PF17848 Acetyl-coA carboxylase zinc finger domain Tbon_01840 PF01039 Carboxyl transferase domain Tbon_01840 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Tbon_01845 PF01925 Sulfite exporter TauE/SafE Tbon_01850 PF02637 GatB domain Tbon_01850 PF02934 GatB/GatE catalytic domain Tbon_01855 PF01933 Uncharacterised protein family UPF0052 Tbon_01865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tbon_01870 PF02911 Formyl transferase, C-terminal domain Tbon_01870 PF00551 Formyl transferase Tbon_01875 PF04055 Radical SAM superfamily Tbon_01885 PF02547 Queuosine biosynthesis protein Tbon_01895 PF02515 CoA-transferase family III Tbon_01910 PF00091 Tubulin/FtsZ family, GTPase domain Tbon_01910 PF12327 FtsZ family, C-terminal domain Tbon_01915 PF02491 SHS2 domain inserted in FTSA Tbon_01920 PF08478 POTRA domain, FtsQ-type Tbon_01920 PF03799 Cell division protein FtsQ Tbon_01925 PF07478 D-ala D-ala ligase C-terminus Tbon_01925 PF01820 D-ala D-ala ligase N-terminus Tbon_01930 PF01565 FAD binding domain Tbon_01930 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Tbon_01935 PF01225 Mur ligase family, catalytic domain Tbon_01935 PF02875 Mur ligase family, glutamate ligase domain Tbon_01935 PF08245 Mur ligase middle domain Tbon_01940 PF04101 Glycosyltransferase family 28 C-terminal domain Tbon_01940 PF03033 Glycosyltransferase family 28 N-terminal domain Tbon_01945 PF01098 Cell cycle protein Tbon_01955 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Tbon_01955 PF00953 Glycosyl transferase family 4 Tbon_01960 PF01225 Mur ligase family, catalytic domain Tbon_01960 PF02875 Mur ligase family, glutamate ligase domain Tbon_01960 PF08245 Mur ligase middle domain Tbon_01965 PF03717 Penicillin-binding Protein dimerisation domain Tbon_01965 PF00905 Penicillin binding protein transpeptidase domain Tbon_01965 PF03793 PASTA domain Tbon_01975 PF01795 MraW methylase family Tbon_01980 PF02381 MraZ protein, putative antitoxin-like Tbon_01985 PF00994 Probable molybdopterin binding domain Tbon_01990 PF01746 tRNA (Guanine-1)-methyltransferase Tbon_02000 PF00440 Bacterial regulatory proteins, tetR family Tbon_02005 PF02687 FtsX-like permease family Tbon_02010 PF00005 ABC transporter Tbon_02015 PF00953 Glycosyl transferase family 4 Tbon_02025 PF03631 Virulence factor BrkB Tbon_02035 PF00005 ABC transporter Tbon_02040 PF01458 Uncharacterized protein family (UPF0051) Tbon_02045 PF01458 Uncharacterized protein family (UPF0051) Tbon_02050 PF00355 Rieske [2Fe-2S] domain Tbon_02055 PF00266 Aminotransferase class-V Tbon_02060 PF01592 NifU-like N terminal domain Tbon_02065 PF01883 Iron-sulfur cluster assembly protein Tbon_02070 PF00378 Enoyl-CoA hydratase/isomerase Tbon_02085 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Tbon_02085 PF00205 Thiamine pyrophosphate enzyme, central domain Tbon_02085 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tbon_02090 PF00378 Enoyl-CoA hydratase/isomerase Tbon_02095 PF00571 CBS domain Tbon_02095 PF01380 SIS domain Tbon_02110 PF00589 Phage integrase family Tbon_02115 PF00565 Staphylococcal nuclease homologue Tbon_02145 PF00717 Peptidase S24-like Tbon_02145 PF01726 LexA DNA binding domain Tbon_02165 PF01695 IstB-like ATP binding protein Tbon_02280 PF01476 LysM domain Tbon_02280 PF08525 Opacity-associated protein A N-terminal motif Tbon_02280 PF01551 Peptidase family M23 Tbon_02330 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tbon_02330 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Tbon_02330 PF13247 4Fe-4S dicluster domain Tbon_02350 PF00753 Metallo-beta-lactamase superfamily Tbon_02350 PF16123 Hydroxyacylglutathione hydrolase C-terminus Tbon_02360 PF00144 Beta-lactamase Tbon_02370 PF00378 Enoyl-CoA hydratase/isomerase Tbon_02375 PF03279 Bacterial lipid A biosynthesis acyltransferase Tbon_02385 PF02811 PHP domain Tbon_02390 PF13439 Glycosyltransferase Family 4 Tbon_02395 PF00483 Nucleotidyl transferase Tbon_02395 PF01066 CDP-alcohol phosphatidyltransferase Tbon_02415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tbon_02415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tbon_02415 PF02770 Acyl-CoA dehydrogenase, middle domain Tbon_02420 PF00266 Aminotransferase class-V Tbon_02425 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Tbon_02425 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Tbon_02425 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Tbon_02430 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Tbon_02430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Tbon_02435 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Tbon_02440 PF00132 Bacterial transferase hexapeptide (six repeats) Tbon_02445 PF02719 Polysaccharide biosynthesis protein Tbon_02450 PF02397 Bacterial sugar transferase Tbon_02455 PF02542 YgbB family Tbon_02460 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Tbon_02475 PF10385 RNA polymerase beta subunit external 1 domain Tbon_02475 PF04565 RNA polymerase Rpb2, domain 3 Tbon_02475 PF04561 RNA polymerase Rpb2, domain 2 Tbon_02475 PF04563 RNA polymerase beta subunit Tbon_02475 PF00562 RNA polymerase Rpb2, domain 6 Tbon_02475 PF04560 RNA polymerase Rpb2, domain 7 Tbon_02505 PF02861 Clp amino terminal domain, pathogenicity island component Tbon_02505 PF10431 C-terminal, D2-small domain, of ClpB protein Tbon_02505 PF00004 ATPase family associated with various cellular activities (AAA) Tbon_02505 PF07724 AAA domain (Cdc48 subfamily) Tbon_02505 PF17871 AAA lid domain Tbon_02510 PF00575 S1 RNA binding domain Tbon_02530 PF00140 Sigma-70 factor, region 1.2 Tbon_02530 PF04545 Sigma-70, region 4 Tbon_02530 PF04539 Sigma-70 region 3 Tbon_02530 PF04542 Sigma-70 region 2 Tbon_02535 PF01195 Peptidyl-tRNA hydrolase Tbon_02550 PF00037 4Fe-4S binding domain Tbon_02555 PF14693 Ribosomal protein TL5, C-terminal domain Tbon_02555 PF01386 Ribosomal L25p family Tbon_02565 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Tbon_02565 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Tbon_02570 PF00072 Response regulator receiver domain Tbon_02570 PF00990 Diguanylate cyclase, GGDEF domain Tbon_02575 PF00106 short chain dehydrogenase Tbon_02590 PF00232 Glycosyl hydrolase family 1 Tbon_02595 PF00255 Glutathione peroxidase Tbon_02605 PF00480 ROK family Tbon_02610 PF01738 Dienelactone hydrolase family Tbon_02615 PF01435 Peptidase family M48 Tbon_02620 PF02469 Fasciclin domain Tbon_02630 PF02622 Uncharacterized ACR, COG1678 Tbon_02640 PF02515 CoA-transferase family III Tbon_02655 PF01479 S4 domain Tbon_02655 PF00849 RNA pseudouridylate synthase Tbon_02660 PF02224 Cytidylate kinase Tbon_02670 PF02401 LytB protein Tbon_02680 PF01039 Carboxyl transferase domain Tbon_02690 PF01293 Phosphoenolpyruvate carboxykinase Tbon_02700 PF01699 Sodium/calcium exchanger protein Tbon_02710 PF01545 Cation efflux family Tbon_02715 PF00270 DEAD/DEAH box helicase Tbon_02715 PF17757 UvrB interaction domain Tbon_02715 PF03461 TRCF domain Tbon_02715 PF00271 Helicase conserved C-terminal domain Tbon_02715 PF02559 CarD-like/TRCF domain Tbon_02725 PF00108 Thiolase, N-terminal domain Tbon_02725 PF02803 Thiolase, C-terminal domain Tbon_02735 PF01594 AI-2E family transporter Tbon_02745 PF10369 Small subunit of acetolactate synthase Tbon_02750 PF00205 Thiamine pyrophosphate enzyme, central domain Tbon_02750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Tbon_02750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tbon_02760 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Tbon_02760 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Tbon_02760 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Tbon_02760 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Tbon_02765 PF00483 Nucleotidyl transferase Tbon_02775 PF02616 Segregation and condensation protein ScpA Tbon_02780 PF18152 DAHP synthase ferredoxin-like domain Tbon_02780 PF00793 DAHP synthetase I family Tbon_02785 PF07736 Chorismate mutase type I Tbon_02790 PF00290 Tryptophan synthase alpha chain Tbon_02805 PF00291 Pyridoxal-phosphate dependent enzyme Tbon_02815 PF00218 Indole-3-glycerol phosphate synthase Tbon_02820 PF00591 Glycosyl transferase family, a/b domain Tbon_02820 PF02885 Glycosyl transferase family, helical bundle domain Tbon_02825 PF00117 Glutamine amidotransferase class-I Tbon_02835 PF13419 Haloacid dehalogenase-like hydrolase Tbon_02855 PF00579 tRNA synthetases class I (W and Y) Tbon_02865 PF03070 TENA/THI-4/PQQC family Tbon_02870 PF00291 Pyridoxal-phosphate dependent enzyme Tbon_02875 PF12146 Serine aminopeptidase, S33 Tbon_02885 PF00132 Bacterial transferase hexapeptide (six repeats) Tbon_02885 PF00483 Nucleotidyl transferase Tbon_02895 PF00795 Carbon-nitrogen hydrolase Tbon_02895 PF02540 NAD synthase Tbon_02900 PF00285 Citrate synthase, C-terminal domain Tbon_02915 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Tbon_02920 PF00814 Glycoprotease family Tbon_02925 PF00334 Nucleoside diphosphate kinase Tbon_02930 PF03641 Possible lysine decarboxylase Tbon_02935 PF07687 Peptidase dimerisation domain Tbon_02935 PF01546 Peptidase family M20/M25/M40 Tbon_02970 PF08331 Domain of unknown function (DUF1730) Tbon_02975 PF01738 Dienelactone hydrolase family Tbon_02995 PF16657 Maltogenic Amylase, C-terminal domain Tbon_02995 PF00128 Alpha amylase, catalytic domain Tbon_03000 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Tbon_03000 PF00128 Alpha amylase, catalytic domain Tbon_03000 PF02806 Alpha amylase, C-terminal all-beta domain Tbon_03010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tbon_03020 PF01841 Transglutaminase-like superfamily Tbon_03020 PF11992 Domain of unknown function (DUF3488) Tbon_03020 PF13559 Domain of unknown function (DUF4129) Tbon_03030 PF07726 ATPase family associated with various cellular activities (AAA) Tbon_03030 PF17863 AAA lid domain Tbon_03035 PF00440 Bacterial regulatory proteins, tetR family Tbon_03035 PF17925 Tetracyclin repressor-like, C-terminal domain Tbon_03040 PF03176 MMPL family Tbon_03045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tbon_03045 PF08028 Acyl-CoA dehydrogenase, C-terminal domain Tbon_03045 PF02770 Acyl-CoA dehydrogenase, middle domain Tbon_03080 PF00583 Acetyltransferase (GNAT) family Tbon_03095 PF13411 MerR HTH family regulatory protein Tbon_03100 PF04055 Radical SAM superfamily Tbon_03100 PF06463 Molybdenum Cofactor Synthesis C Tbon_03120 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Tbon_03120 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Tbon_03125 PF13419 Haloacid dehalogenase-like hydrolase Tbon_03130 PF00067 Cytochrome P450 Tbon_03135 PF02515 CoA-transferase family III Tbon_03140 PF02515 CoA-transferase family III Tbon_03145 PF01152 Bacterial-like globin Tbon_03155 PF00881 Nitroreductase family Tbon_03170 PF01926 50S ribosome-binding GTPase Tbon_03170 PF06071 Protein of unknown function (DUF933) Tbon_03190 PF02875 Mur ligase family, glutamate ligase domain Tbon_03190 PF08245 Mur ligase middle domain Tbon_03195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tbon_03200 PF00528 Binding-protein-dependent transport system inner membrane component Tbon_03205 PF00528 Binding-protein-dependent transport system inner membrane component Tbon_03205 PF12911 N-terminal TM domain of oligopeptide transport permease C Tbon_03230 PF01575 MaoC like domain Tbon_03240 PF00067 Cytochrome P450 Tbon_03245 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Tbon_03250 PF00809 Pterin binding enzyme Tbon_03260 PF00394 Multicopper oxidase Tbon_03260 PF07731 Multicopper oxidase Tbon_03260 PF07732 Multicopper oxidase Tbon_03275 PF02515 CoA-transferase family III Tbon_03280 PF16363 GDP-mannose 4,6 dehydratase Tbon_03355 PF00330 Aconitase family (aconitate hydratase) Tbon_03360 PF00694 Aconitase C-terminal domain Tbon_03370 PF03588 Leucyl/phenylalanyl-tRNA protein transferase Tbon_03380 PF00180 Isocitrate/isopropylmalate dehydrogenase Tbon_03385 PF00107 Zinc-binding dehydrogenase Tbon_03385 PF08240 Alcohol dehydrogenase GroES-like domain Tbon_03395 PF00289 Biotin carboxylase, N-terminal domain Tbon_03395 PF00364 Biotin-requiring enzyme Tbon_03395 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Tbon_03395 PF02785 Biotin carboxylase C-terminal domain Tbon_03405 PF01039 Carboxyl transferase domain Tbon_03410 PF00692 dUTPase Tbon_03415 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Tbon_03415 PF00753 Metallo-beta-lactamase superfamily Tbon_03415 PF10996 Beta-Casp domain Tbon_03420 PF00753 Metallo-beta-lactamase superfamily Tbon_03430 PF02515 CoA-transferase family III Tbon_03445 PF02699 Preprotein translocase subunit Tbon_03450 PF02355 Protein export membrane protein Tbon_03455 PF07549 SecD/SecF GG Motif Tbon_03455 PF02355 Protein export membrane protein Tbon_03460 PF04055 Radical SAM superfamily Tbon_03470 PF13545 Crp-like helix-turn-helix domain Tbon_03470 PF00027 Cyclic nucleotide-binding domain Tbon_03475 PF13369 Transglutaminase-like superfamily Tbon_03480 PF00005 ABC transporter Tbon_03500 PF00753 Metallo-beta-lactamase superfamily Tbon_03505 PF01571 Aminomethyltransferase folate-binding domain Tbon_03505 PF08669 Glycine cleavage T-protein C-terminal barrel domain Tbon_03530 PF08281 Sigma-70, region 4 Tbon_03530 PF04542 Sigma-70 region 2 Tbon_03535 PF10502 Signal peptidase, peptidase S26 Tbon_03540 PF00156 Phosphoribosyl transferase domain Tbon_03550 PF00809 Pterin binding enzyme Tbon_03565 PF04030 D-arabinono-1,4-lactone oxidase Tbon_03565 PF01565 FAD binding domain Tbon_03590 PF00535 Glycosyl transferase family 2 Tbon_03595 PF02515 CoA-transferase family III Tbon_03610 PF03109 ABC1 family Tbon_03620 PF00534 Glycosyl transferases group 1 Tbon_03620 PF13439 Glycosyltransferase Family 4 Tbon_03625 PF00483 Nucleotidyl transferase Tbon_03630 PF16363 GDP-mannose 4,6 dehydratase Tbon_03635 PF00994 Probable molybdopterin binding domain Tbon_03635 PF03454 MoeA C-terminal region (domain IV) Tbon_03635 PF03453 MoeA N-terminal region (domain I and II) Tbon_03645 PF00578 AhpC/TSA family Tbon_03650 PF01409 tRNA synthetases class II core domain (F) Tbon_03650 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Tbon_03655 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Tbon_03655 PF03147 Ferredoxin-fold anticodon binding domain Tbon_03655 PF01588 Putative tRNA binding domain Tbon_03655 PF03483 B3/4 domain Tbon_03655 PF03484 tRNA synthetase B5 domain Tbon_03675 PF00733 Asparagine synthase Tbon_03675 PF13537 Glutamine amidotransferase domain Tbon_03680 PF00106 short chain dehydrogenase Tbon_03695 PF00528 Binding-protein-dependent transport system inner membrane component Tbon_03700 PF09084 NMT1/THI5 like Tbon_03705 PF00005 ABC transporter Tbon_03710 PF00378 Enoyl-CoA hydratase/isomerase Tbon_03715 PF02515 CoA-transferase family III Tbon_03735 PF01565 FAD binding domain Tbon_03735 PF02913 FAD linked oxidases, C-terminal domain Tbon_03740 PF02913 FAD linked oxidases, C-terminal domain Tbon_03740 PF01565 FAD binding domain Tbon_03745 PF13183 4Fe-4S dicluster domain Tbon_03745 PF02754 Cysteine-rich domain Tbon_03750 PF08448 PAS fold Tbon_03750 PF00990 Diguanylate cyclase, GGDEF domain Tbon_03770 PF00413 Matrixin Tbon_03775 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Tbon_03775 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Tbon_03790 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter Tbon_03805 PF01899 Na+/H+ ion antiporter subunit Tbon_03810 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) Tbon_03815 PF03334 Na+/H+ antiporter subunit Tbon_03820 PF13426 PAS domain Tbon_03820 PF08447 PAS fold Tbon_03820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tbon_03830 PF00132 Bacterial transferase hexapeptide (six repeats) Tbon_03840 PF00378 Enoyl-CoA hydratase/isomerase Tbon_03845 PF13649 Methyltransferase domain Tbon_03850 PF02504 Fatty acid synthesis protein Tbon_03885 PF00781 Diacylglycerol kinase catalytic domain Tbon_03890 PF00108 Thiolase, N-terminal domain Tbon_03890 PF02803 Thiolase, C-terminal domain Tbon_03910 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Tbon_03915 PF01370 NAD dependent epimerase/dehydratase family Tbon_03920 PF04321 RmlD substrate binding domain Tbon_03950 PF00701 Dihydrodipicolinate synthetase family Tbon_03970 PF04545 Sigma-70, region 4 Tbon_03970 PF04542 Sigma-70 region 2 Tbon_03975 PF13180 PDZ domain Tbon_03985 PF00561 alpha/beta hydrolase fold Tbon_03990 PF01979 Amidohydrolase family Tbon_04010 PF03449 Transcription elongation factor, N-terminal Tbon_04010 PF01272 Transcription elongation factor, GreA/GreB, C-term Tbon_04015 PF02527 rRNA small subunit methyltransferase G Tbon_04030 PF07859 alpha/beta hydrolase fold Tbon_04045 PF00266 Aminotransferase class-V Tbon_04070 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Tbon_04085 PF00005 ABC transporter Tbon_04090 PF01032 FecCD transport family Tbon_04095 PF01497 Periplasmic binding protein Tbon_04115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tbon_04115 PF02770 Acyl-CoA dehydrogenase, middle domain Tbon_04115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tbon_04135 PF00378 Enoyl-CoA hydratase/isomerase Tbon_04140 PF00700 Bacterial flagellin C-terminal helical region Tbon_04140 PF00669 Bacterial flagellin N-terminal helical region Tbon_04145 PF00460 Flagella basal body rod protein Tbon_04145 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tbon_04160 PF00460 Flagella basal body rod protein Tbon_04160 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tbon_04165 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tbon_04165 PF00460 Flagella basal body rod protein Tbon_04180 PF04539 Sigma-70 region 3 Tbon_04180 PF04542 Sigma-70 region 2 Tbon_04180 PF04545 Sigma-70, region 4 Tbon_04200 PF00771 FHIPEP family Tbon_04205 PF01312 FlhB HrpN YscU SpaS Family Tbon_04210 PF01311 Bacterial export proteins, family 1 Tbon_04215 PF01313 Bacterial export proteins, family 3 Tbon_04220 PF00813 FliP family Tbon_04230 PF04509 CheC-like family Tbon_04230 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Tbon_04240 PF13677 Membrane MotB of proton-channel complex MotA/MotB Tbon_04240 PF00691 OmpA family Tbon_04245 PF01618 MotA/TolQ/ExbB proton channel family Tbon_04255 PF00392 Bacterial regulatory proteins, gntR family Tbon_04255 PF07729 FCD domain Tbon_04270 PF17668 Acetyltransferase (GNAT) domain Tbon_04270 PF13530 Sterol carrier protein domain Tbon_04275 PF05193 Peptidase M16 inactive domain Tbon_04275 PF00675 Insulinase (Peptidase family M16) Tbon_04285 PF01578 Cytochrome C assembly protein Tbon_04300 PF04545 Sigma-70, region 4 Tbon_04300 PF04542 Sigma-70 region 2 Tbon_04310 PF02463 RecF/RecN/SMC N terminal domain Tbon_04325 PF00990 Diguanylate cyclase, GGDEF domain Tbon_04325 PF03707 Bacterial signalling protein N terminal repeat Tbon_04325 PF00563 EAL domain Tbon_04350 PF02163 Peptidase family M50 Tbon_04350 PF00571 CBS domain Tbon_04355 PF08353 Domain of unknown function (DUF1727) Tbon_04355 PF08245 Mur ligase middle domain Tbon_04360 PF02625 XdhC and CoxI family Tbon_04360 PF13478 XdhC Rossmann domain Tbon_04365 PF00300 Histidine phosphatase superfamily (branch 1) Tbon_04390 PF00378 Enoyl-CoA hydratase/isomerase Tbon_04400 PF00753 Metallo-beta-lactamase superfamily Tbon_04400 PF16123 Hydroxyacylglutathione hydrolase C-terminus Tbon_04410 PF00171 Aldehyde dehydrogenase family Tbon_04430 PF00571 CBS domain Tbon_04430 PF01595 Cyclin M transmembrane N-terminal domain Tbon_04430 PF03471 Transporter associated domain Tbon_04435 PF00005 ABC transporter Tbon_04435 PF00664 ABC transporter transmembrane region Tbon_04440 PF00005 ABC transporter Tbon_04440 PF00664 ABC transporter transmembrane region Tbon_04445 PF00565 Staphylococcal nuclease homologue Tbon_04450 PF13649 Methyltransferase domain Tbon_04455 PF00986 DNA gyrase B subunit, carboxyl terminus Tbon_04455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tbon_04455 PF01751 Toprim domain Tbon_04455 PF00204 DNA gyrase B Tbon_04465 PF07687 Peptidase dimerisation domain Tbon_04465 PF01546 Peptidase family M20/M25/M40 Tbon_04480 PF13185 GAF domain Tbon_04480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tbon_04480 PF07730 Histidine kinase Tbon_04485 PF00072 Response regulator receiver domain Tbon_04485 PF00196 Bacterial regulatory proteins, luxR family Tbon_04495 PF03976 Polyphosphate kinase 2 (PPK2) Tbon_04500 PF00291 Pyridoxal-phosphate dependent enzyme Tbon_04510 PF03447 Homoserine dehydrogenase, NAD binding domain Tbon_04510 PF01842 ACT domain Tbon_04510 PF00742 Homoserine dehydrogenase Tbon_04520 PF01084 Ribosomal protein S18 Tbon_04525 PF00436 Single-strand binding protein family Tbon_04530 PF01250 Ribosomal protein S6 Tbon_04535 PF00464 Serine hydroxymethyltransferase Tbon_04555 PF00378 Enoyl-CoA hydratase/isomerase Tbon_04560 PF04264 YceI-like domain Tbon_04585 PF00378 Enoyl-CoA hydratase/isomerase Tbon_04610 PF00561 alpha/beta hydrolase fold Tbon_04615 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tbon_04615 PF07497 Rho termination factor, RNA-binding domain Tbon_04615 PF07498 Rho termination factor, N-terminal domain Tbon_04620 PF08460 Bacterial SH3 domain Tbon_04620 PF01551 Peptidase family M23 Tbon_04640 PF01980 tRNA-methyltransferase O Tbon_04640 PF18389 TrmO C-terminal domain Tbon_04645 PF00561 alpha/beta hydrolase fold Tbon_04645 PF08386 TAP-like protein Tbon_04650 PF13350 Tyrosine phosphatase family Tbon_04655 PF10502 Signal peptidase, peptidase S26 Tbon_04660 PF00378 Enoyl-CoA hydratase/isomerase Tbon_04665 PF00466 Ribosomal protein L10 Tbon_04670 PF16320 Ribosomal protein L7/L12 dimerisation domain Tbon_04670 PF00542 Ribosomal protein L7/L12 C-terminal domain Tbon_04675 PF02254 TrkA-N domain Tbon_04675 PF00999 Sodium/hydrogen exchanger family Tbon_04680 PF08240 Alcohol dehydrogenase GroES-like domain Tbon_04680 PF00107 Zinc-binding dehydrogenase Tbon_04685 PF01725 Ham1 family Tbon_04695 PF04055 Radical SAM superfamily Tbon_04695 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family Tbon_04700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tbon_04700 PF00672 HAMP domain Tbon_04700 PF00512 His Kinase A (phospho-acceptor) domain Tbon_04705 PF00072 Response regulator receiver domain Tbon_04710 PF00682 HMGL-like Tbon_04710 PF08502 LeuA allosteric (dimerisation) domain Tbon_04720 PF00005 ABC transporter Tbon_04720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tbon_04725 PF00717 Peptidase S24-like Tbon_04725 PF01726 LexA DNA binding domain Tbon_04740 PF04545 Sigma-70, region 4 Tbon_04740 PF04542 Sigma-70 region 2 Tbon_04745 PF11638 DnaA N-terminal domain Tbon_04745 PF08299 Bacterial dnaA protein helix-turn-helix Tbon_04745 PF00308 Bacterial dnaA protein Tbon_04760 PF00005 ABC transporter Tbon_04770 PF00005 ABC transporter Tbon_04770 PF13732 Domain of unknown function (DUF4162) Tbon_04790 PF01343 Peptidase family S49 Tbon_04795 PF00067 Cytochrome P450 Tbon_04800 PF00067 Cytochrome P450 Tbon_04820 PF00731 AIR carboxylase Tbon_04825 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain Tbon_04825 PF02222 ATP-grasp domain Tbon_04830 PF13193 AMP-binding enzyme C-terminal domain Tbon_04830 PF00501 AMP-binding enzyme Tbon_04835 PF00378 Enoyl-CoA hydratase/isomerase Tbon_04855 PF00072 Response regulator receiver domain Tbon_04855 PF00196 Bacterial regulatory proteins, luxR family Tbon_04875 PF03030 Inorganic H+ pyrophosphatase Tbon_04880 PF00180 Isocitrate/isopropylmalate dehydrogenase Tbon_04900 PF02021 Uncharacterised protein family UPF0102 Tbon_04905 PF01351 Ribonuclease HII Tbon_04910 PF02769 AIR synthase related protein, C-terminal domain Tbon_04910 PF00586 AIR synthase related protein, N-terminal domain Tbon_04930 PF00561 alpha/beta hydrolase fold Tbon_04940 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tbon_04955 PF01425 Amidase Tbon_04965 PF00684 DnaJ central domain Tbon_04965 PF01556 DnaJ C terminal domain Tbon_04965 PF00226 DnaJ domain Tbon_04985 PF04055 Radical SAM superfamily Tbon_04985 PF18693 TRAM domain Tbon_04985 PF00919 Uncharacterized protein family UPF0004 Tbon_04990 PF03951 Glutamine synthetase, beta-Grasp domain Tbon_04990 PF00120 Glutamine synthetase, catalytic domain Tbon_05010 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tbon_05015 PF00085 Thioredoxin Tbon_05020 PF02583 Metal-sensitive transcriptional repressor Tbon_05025 PF02595 Glycerate kinase family Tbon_05045 PF00378 Enoyl-CoA hydratase/isomerase Tbon_05050 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Tbon_05050 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Tbon_05060 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Tbon_05075 PF00989 PAS fold Tbon_05075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tbon_05075 PF00512 His Kinase A (phospho-acceptor) domain Tbon_05080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tbon_05080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tbon_05080 PF02770 Acyl-CoA dehydrogenase, middle domain Tbon_05085 PF00561 alpha/beta hydrolase fold Tbon_05090 PF01202 Shikimate kinase Tbon_05095 PF00753 Metallo-beta-lactamase superfamily Tbon_05120 PF00296 Luciferase-like monooxygenase Tbon_05125 PF02965 Vitamin B12 dependent methionine synthase, activation domain Tbon_05125 PF02607 B12 binding domain Tbon_05125 PF02574 Homocysteine S-methyltransferase Tbon_05125 PF00809 Pterin binding enzyme Tbon_05125 PF02310 B12 binding domain Tbon_05150 PF00583 Acetyltransferase (GNAT) family Tbon_05150 PF00814 Glycoprotease family Tbon_05155 PF09335 SNARE associated Golgi protein Tbon_05160 PF04127 DNA / pantothenate metabolism flavoprotein Tbon_05160 PF02441 Flavoprotein Tbon_05165 PF03309 Type III pantothenate kinase Tbon_05170 PF00570 HRDC domain Tbon_05170 PF09382 RQC domain Tbon_05170 PF16124 RecQ zinc-binding Tbon_05170 PF00271 Helicase conserved C-terminal domain Tbon_05170 PF00270 DEAD/DEAH box helicase Tbon_05180 PF12697 Alpha/beta hydrolase family Tbon_05185 PF05173 Dihydrodipicolinate reductase, C-terminus Tbon_05185 PF01113 Dihydrodipicolinate reductase, N-terminus Tbon_05195 PF13193 AMP-binding enzyme C-terminal domain Tbon_05195 PF00501 AMP-binding enzyme Tbon_05210 PF09827 CRISPR associated protein Cas2 Tbon_05215 PF01867 CRISPR associated protein Cas1 Tbon_05215 PF01930 Domain of unknown function DUF83 Tbon_05275 PF03741 Integral membrane protein TerC family Tbon_05305 PF00108 Thiolase, N-terminal domain Tbon_05305 PF02803 Thiolase, C-terminal domain Tbon_05320 PF00521 DNA gyrase/topoisomerase IV, subunit A Tbon_05320 PF03989 DNA gyrase C-terminal domain, beta-propeller Tbon_05325 PF00293 NUDIX domain Tbon_05330 PF02086 D12 class N6 adenine-specific DNA methyltransferase Tbon_05340 PF00067 Cytochrome P450 Tbon_05345 PF00378 Enoyl-CoA hydratase/isomerase Tbon_05375 PF00633 Helix-hairpin-helix motif Tbon_05375 PF14815 NUDIX domain Tbon_05375 PF00730 HhH-GPD superfamily base excision DNA repair protein Tbon_05385 PF00145 C-5 cytosine-specific DNA methylase Tbon_05405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tbon_05405 PF02770 Acyl-CoA dehydrogenase, middle domain Tbon_05405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tbon_05425 PF04143 Sulphur transport Tbon_05435 PF07859 alpha/beta hydrolase fold Tbon_05440 PF00296 Luciferase-like monooxygenase Tbon_05450 PF00005 ABC transporter Tbon_05450 PF00664 ABC transporter transmembrane region Tbon_05455 PF00664 ABC transporter transmembrane region Tbon_05455 PF00005 ABC transporter Tbon_05460 PF05140 ResB-like family Tbon_05465 PF00578 AhpC/TSA family Tbon_05475 PF00271 Helicase conserved C-terminal domain Tbon_05475 PF09369 Domain of unknown function (DUF1998) Tbon_05475 PF00270 DEAD/DEAH box helicase Tbon_05490 PF01808 AICARFT/IMPCHase bienzyme Tbon_05490 PF02142 MGS-like domain Tbon_05495 PF00293 NUDIX domain Tbon_05515 PF00440 Bacterial regulatory proteins, tetR family Tbon_05520 PF00108 Thiolase, N-terminal domain Tbon_05520 PF02803 Thiolase, C-terminal domain Tbon_05530 PF00109 Beta-ketoacyl synthase, N-terminal domain Tbon_05530 PF02801 Beta-ketoacyl synthase, C-terminal domain Tbon_05535 PF12706 Beta-lactamase superfamily domain Tbon_05550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tbon_05570 PF00730 HhH-GPD superfamily base excision DNA repair protein Tbon_05570 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain Tbon_05580 PF00459 Inositol monophosphatase family Tbon_05585 PF08450 SMP-30/Gluconolactonase/LRE-like region Tbon_05590 PF00012 Hsp70 protein Tbon_05595 PF01025 GrpE Tbon_05600 PF01628 HrcA protein C terminal domain Tbon_05615 PF13188 PAS domain Tbon_05615 PF00512 His Kinase A (phospho-acceptor) domain Tbon_05615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tbon_05615 PF00072 Response regulator receiver domain Tbon_05615 PF08448 PAS fold Tbon_05620 PF00011 Hsp20/alpha crystallin family Tbon_05645 PF02630 SCO1/SenC Tbon_05660 PF00106 short chain dehydrogenase Tbon_05665 PF00300 Histidine phosphatase superfamily (branch 1) Tbon_05670 PF00709 Adenylosuccinate synthetase Tbon_05675 PF00528 Binding-protein-dependent transport system inner membrane component Tbon_05675 PF12911 N-terminal TM domain of oligopeptide transport permease C Tbon_05680 PF00528 Binding-protein-dependent transport system inner membrane component Tbon_05685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tbon_05710 PF01551 Peptidase family M23 Tbon_05710 PF01476 LysM domain Tbon_05715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tbon_05715 PF00512 His Kinase A (phospho-acceptor) domain Tbon_05715 PF00989 PAS fold Tbon_05720 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Tbon_05720 PF06827 Zinc finger found in FPG and IleRS Tbon_05720 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Tbon_05730 PF02515 CoA-transferase family III Tbon_05750 PF00266 Aminotransferase class-V Tbon_05755 PF13840 ACT domain Tbon_05755 PF01842 ACT domain Tbon_05755 PF00696 Amino acid kinase family Tbon_05770 PF00067 Cytochrome P450 Tbon_05775 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Tbon_05780 PF07722 Peptidase C26 Tbon_05785 PF00226 DnaJ domain Tbon_05785 PF00684 DnaJ central domain Tbon_05785 PF01556 DnaJ C terminal domain Tbon_05805 PF02146 Sir2 family Tbon_05810 PF00144 Beta-lactamase Tbon_05815 PF13087 AAA domain Tbon_05815 PF13195 Protein of unknown function (DUF4011) Tbon_05815 PF13086 AAA domain Tbon_05820 PF00970 Oxidoreductase FAD-binding domain Tbon_05820 PF00111 2Fe-2S iron-sulfur cluster binding domain Tbon_05820 PF00175 Oxidoreductase NAD-binding domain Tbon_05830 PF08534 Redoxin Tbon_05835 PF00486 Transcriptional regulatory protein, C terminal Tbon_05835 PF00072 Response regulator receiver domain Tbon_05840 PF16736 Single Cache-like Tbon_05840 PF00989 PAS fold Tbon_05840 PF00512 His Kinase A (phospho-acceptor) domain Tbon_05840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tbon_05850 PF01741 Large-conductance mechanosensitive channel, MscL Tbon_05855 PF08240 Alcohol dehydrogenase GroES-like domain Tbon_05855 PF00107 Zinc-binding dehydrogenase Tbon_05860 PF00118 TCP-1/cpn60 chaperonin family Tbon_05865 PF00166 Chaperonin 10 Kd subunit Tbon_05885 PF00378 Enoyl-CoA hydratase/isomerase Tbon_05890 PF00690 Cation transporter/ATPase, N-terminus Tbon_05890 PF00689 Cation transporting ATPase, C-terminus Tbon_05905 PF01544 CorA-like Mg2+ transporter protein Tbon_05915 PF04542 Sigma-70 region 2 Tbon_05915 PF04545 Sigma-70, region 4 Tbon_05945 PF00156 Phosphoribosyl transferase domain Tbon_05950 PF00132 Bacterial transferase hexapeptide (six repeats) Tbon_05950 PF06426 Serine acetyltransferase, N-terminal Tbon_05955 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Tbon_05955 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Tbon_05960 PF00486 Transcriptional regulatory protein, C terminal Tbon_05965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tbon_05965 PF00072 Response regulator receiver domain Tbon_05965 PF13188 PAS domain Tbon_05965 PF08448 PAS fold Tbon_05965 PF00512 His Kinase A (phospho-acceptor) domain Tbon_05970 PF07685 CobB/CobQ-like glutamine amidotransferase domain Tbon_05970 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Tbon_05975 PF13426 PAS domain Tbon_05975 PF08447 PAS fold Tbon_05975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tbon_05990 PF01176 Translation initiation factor 1A / IF-1 Tbon_05995 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Tbon_06000 PF02569 Pantoate-beta-alanine ligase Tbon_06005 PF02548 Ketopantoate hydroxymethyltransferase Tbon_06010 PF02261 Aspartate decarboxylase Tbon_06020 PF09190 DALR domain Tbon_06020 PF01406 tRNA synthetases class I (C) catalytic domain Tbon_06040 PF01169 Uncharacterized protein family UPF0016 Tbon_06050 PF13732 Domain of unknown function (DUF4162) Tbon_06050 PF00005 ABC transporter Tbon_06060 PF02417 Chromate transporter Tbon_06065 PF00719 Inorganic pyrophosphatase Tbon_06075 PF12848 ABC transporter Tbon_06075 PF00005 ABC transporter Tbon_06080 PF02913 FAD linked oxidases, C-terminal domain Tbon_06080 PF01565 FAD binding domain Tbon_06090 PF00781 Diacylglycerol kinase catalytic domain Tbon_06090 PF02142 MGS-like domain Tbon_06100 PF00072 Response regulator receiver domain Tbon_06100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tbon_06100 PF00512 His Kinase A (phospho-acceptor) domain Tbon_06100 PF13188 PAS domain Tbon_06100 PF08448 PAS fold Tbon_06105 PF00990 Diguanylate cyclase, GGDEF domain Tbon_06105 PF00072 Response regulator receiver domain Tbon_06130 PF06965 Na+/H+ antiporter 1 Tbon_06145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tbon_06145 PF08447 PAS fold Tbon_06145 PF13426 PAS domain Tbon_06150 PF00403 Heavy-metal-associated domain Tbon_06175 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Tbon_06175 PF06827 Zinc finger found in FPG and IleRS Tbon_06175 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Tbon_06190 PF00891 O-methyltransferase domain Tbon_06195 PF07859 alpha/beta hydrolase fold Tbon_06200 PF13173 AAA domain Tbon_06200 PF13635 Domain of unknown function (DUF4143) Tbon_06210 PF00378 Enoyl-CoA hydratase/isomerase Tbon_06225 PF08402 TOBE domain Tbon_06225 PF00005 ABC transporter Tbon_06230 PF00528 Binding-protein-dependent transport system inner membrane component Tbon_06235 PF01547 Bacterial extracellular solute-binding protein Tbon_06240 PF02768 DNA polymerase III beta subunit, C-terminal domain Tbon_06240 PF02767 DNA polymerase III beta subunit, central domain Tbon_06240 PF00712 DNA polymerase III beta subunit, N-terminal domain Tbon_06250 PF01161 Phosphatidylethanolamine-binding protein Tbon_06265 PF00141 Peroxidase Tbon_06285 PF02600 Disulfide bond formation protein DsbB Tbon_06305 PF02190 ATP-dependent protease La (LON) substrate-binding domain Tbon_06305 PF00004 ATPase family associated with various cellular activities (AAA) Tbon_06305 PF05362 Lon protease (S16) C-terminal proteolytic domain Tbon_06325 PF02653 Branched-chain amino acid transport system / permease component Tbon_06325 PF11862 Domain of unknown function (DUF3382) Tbon_06335 PF00005 ABC transporter Tbon_06340 PF00005 ABC transporter Tbon_06340 PF12399 Branched-chain amino acid ATP-binding cassette transporter Tbon_06370 PF01040 UbiA prenyltransferase family Tbon_06375 PF02075 Crossover junction endodeoxyribonuclease RuvC Tbon_06390 PF00271 Helicase conserved C-terminal domain Tbon_06390 PF04851 Type III restriction enzyme, res subunit Tbon_06390 PF02151 UvrB/uvrC motif Tbon_06390 PF17757 UvrB interaction domain Tbon_06390 PF12344 Ultra-violet resistance protein B Tbon_06395 PF00378 Enoyl-CoA hydratase/isomerase Tbon_06400 PF07885 Ion channel Tbon_06400 PF02254 TrkA-N domain Tbon_06415 PF00378 Enoyl-CoA hydratase/isomerase Tbon_06420 PF01926 50S ribosome-binding GTPase Tbon_06420 PF01018 GTP1/OBG Tbon_06420 PF09269 Domain of unknown function (DUF1967) Tbon_06425 PF02585 GlcNAc-PI de-N-acetylase Tbon_06430 PF00391 PEP-utilising enzyme, mobile domain Tbon_06430 PF01370 NAD dependent epimerase/dehydratase family Tbon_06435 PF02896 PEP-utilising enzyme, TIM barrel domain Tbon_06435 PF00391 PEP-utilising enzyme, mobile domain Tbon_06435 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Tbon_06450 PF02811 PHP domain Tbon_06450 PF14579 Helix-hairpin-helix motif Tbon_06450 PF07733 Bacterial DNA polymerase III alpha NTPase domain Tbon_06450 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Tbon_06455 PF00923 Transaldolase/Fructose-6-phosphate aldolase Tbon_06470 PF05922 Peptidase inhibitor I9 Tbon_06470 PF00082 Subtilase family Tbon_06485 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Tbon_06490 PF01168 Alanine racemase, N-terminal domain Tbon_06490 PF00842 Alanine racemase, C-terminal domain Tbon_06495 PF01551 Peptidase family M23 Tbon_06495 PF10145 Phage-related minor tail protein Tbon_06495 PF01464 Transglycosylase SLT domain Tbon_06500 PF00468 Ribosomal protein L34 Tbon_06505 PF00825 Ribonuclease P Tbon_06510 PF01809 Putative membrane protein insertion efficiency factor Tbon_06520 PF02096 60Kd inner membrane protein Tbon_06525 PF01424 R3H domain Tbon_06525 PF01424 R3H domain Tbon_06525 PF14804 Jag N-terminus Tbon_06525 PF14804 Jag N-terminus Tbon_06535 PF13614 AAA domain Tbon_06540 PF02195 ParB-like nuclease domain Tbon_06540 PF17762 HTH domain found in ParB protein Tbon_06550 PF14572 Phosphoribosyl synthetase-associated domain Tbon_06550 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Tbon_06555 PF13462 Thioredoxin Tbon_06555 PF06965 Na+/H+ antiporter 1 Tbon_06560 PF00561 alpha/beta hydrolase fold Tbon_06570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tbon_06570 PF02770 Acyl-CoA dehydrogenase, middle domain Tbon_06570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tbon_06585 PF04226 Transglycosylase associated protein Tbon_06610 PF00296 Luciferase-like monooxygenase Tbon_06640 PF00005 ABC transporter Tbon_06655 PF04542 Sigma-70 region 2 Tbon_06655 PF08281 Sigma-70, region 4 Tbon_06660 PF00535 Glycosyl transferase family 2 Tbon_06720 PF00133 tRNA synthetases class I (I, L, M and V) Tbon_06720 PF08264 Anticodon-binding domain of tRNA Tbon_06730 PF00561 alpha/beta hydrolase fold Tbon_06745 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Tbon_06745 PF00390 Malic enzyme, N-terminal domain Tbon_06745 PF03949 Malic enzyme, NAD binding domain Tbon_06760 PF13380 CoA binding domain Tbon_06765 PF00108 Thiolase, N-terminal domain Tbon_06765 PF02803 Thiolase, C-terminal domain Tbon_06775 PF04002 RadC-like JAB domain Tbon_06780 PF00089 Trypsin Tbon_06795 PF08239 Bacterial SH3 domain Tbon_06795 PF01476 LysM domain Tbon_06795 PF00877 NlpC/P60 family Tbon_06800 PF02617 ATP-dependent Clp protease adaptor protein ClpS Tbon_06810 PF00561 alpha/beta hydrolase fold Tbon_06815 PF07690 Major Facilitator Superfamily Tbon_06830 PF02223 Thymidylate kinase Tbon_06845 PF01174 SNO glutamine amidotransferase family Tbon_06850 PF02617 ATP-dependent Clp protease adaptor protein ClpS Tbon_06860 PF03062 MBOAT, membrane-bound O-acyltransferase family Tbon_06875 PF07859 alpha/beta hydrolase fold Tbon_06885 PF00230 Major intrinsic protein Tbon_06890 PF01451 Low molecular weight phosphotyrosine protein phosphatase Tbon_06895 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Tbon_06895 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Tbon_06905 PF03328 HpcH/HpaI aldolase/citrate lyase family Tbon_06910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Tbon_06910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Tbon_06925 PF00293 NUDIX domain Tbon_06940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tbon_06940 PF00512 His Kinase A (phospho-acceptor) domain Tbon_06940 PF00072 Response regulator receiver domain Tbon_06940 PF13188 PAS domain Tbon_06940 PF08448 PAS fold Tbon_06945 PF12627 Probable RNA and SrmB- binding site of polymerase A Tbon_06945 PF13735 tRNA nucleotidyltransferase domain 2 putative Tbon_06945 PF01743 Poly A polymerase head domain Tbon_06950 PF01593 Flavin containing amine oxidoreductase Tbon_06960 PF00543 Nitrogen regulatory protein P-II Tbon_06965 PF00909 Ammonium Transporter Family Tbon_06970 PF01012 Electron transfer flavoprotein domain Tbon_06975 PF00766 Electron transfer flavoprotein FAD-binding domain Tbon_06975 PF01012 Electron transfer flavoprotein domain Tbon_06995 PF13439 Glycosyltransferase Family 4 Tbon_07005 PF00916 Sulfate permease family Tbon_07005 PF01740 STAS domain Tbon_07015 PF00990 Diguanylate cyclase, GGDEF domain Tbon_07015 PF05230 MASE2 domain Tbon_07030 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Tbon_07030 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Tbon_07045 PF12169 DNA polymerase III subunits gamma and tau domain III Tbon_07050 PF04468 PSP1 C-terminal conserved region Tbon_07060 PF00144 Beta-lactamase Tbon_07070 PF00248 Aldo/keto reductase family Tbon_07085 PF01040 UbiA prenyltransferase family Tbon_07090 PF01209 ubiE/COQ5 methyltransferase family Tbon_07095 PF00535 Glycosyl transferase family 2 Tbon_07100 PF00033 Cytochrome b/b6/petB Tbon_07130 PF01165 Ribosomal protein S21 Tbon_07135 PF09424 Yqey-like protein Tbon_07145 PF01966 HD domain Tbon_07145 PF07697 7TM-HD extracellular Tbon_07145 PF07698 7TM receptor with intracellular HD hydrolase Tbon_07160 PF02769 AIR synthase related protein, C-terminal domain Tbon_07160 PF00586 AIR synthase related protein, N-terminal domain Tbon_07160 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Tbon_07165 PF02163 Peptidase family M50 Tbon_07165 PF00571 CBS domain Tbon_07175 PF00905 Penicillin binding protein transpeptidase domain Tbon_07175 PF03717 Penicillin-binding Protein dimerisation domain Tbon_07180 PF00378 Enoyl-CoA hydratase/isomerase Tbon_07190 PF00483 Nucleotidyl transferase Tbon_07195 PF01066 CDP-alcohol phosphatidyltransferase Tbon_07195 PF00483 Nucleotidyl transferase Tbon_07240 PF00512 His Kinase A (phospho-acceptor) domain Tbon_07240 PF00072 Response regulator receiver domain Tbon_07240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tbon_07240 PF08448 PAS fold Tbon_07240 PF13188 PAS domain Tbon_07245 PF00109 Beta-ketoacyl synthase, N-terminal domain Tbon_07245 PF02801 Beta-ketoacyl synthase, C-terminal domain Tbon_07250 PF13183 4Fe-4S dicluster domain Tbon_07250 PF02665 Nitrate reductase gamma subunit Tbon_07250 PF02754 Cysteine-rich domain Tbon_07255 PF00501 AMP-binding enzyme Tbon_07255 PF13193 AMP-binding enzyme C-terminal domain Tbon_07270 PF04679 ATP dependent DNA ligase C terminal region Tbon_07270 PF13298 DNA polymerase Ligase (LigD) Tbon_07270 PF01068 ATP dependent DNA ligase domain Tbon_07295 PF02126 Phosphotriesterase family Tbon_07315 PF01022 Bacterial regulatory protein, arsR family Tbon_07320 PF00561 alpha/beta hydrolase fold Tbon_07325 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Tbon_07340 PF07690 Major Facilitator Superfamily Tbon_07345 PF00588 SpoU rRNA Methylase family Tbon_07345 PF08032 RNA 2'-O ribose methyltransferase substrate binding Tbon_07350 PF00919 Uncharacterized protein family UPF0004 Tbon_07350 PF04055 Radical SAM superfamily Tbon_07350 PF01938 TRAM domain Tbon_07360 PF04079 Segregation and condensation complex subunit ScpB Tbon_07365 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Tbon_07370 PF07685 CobB/CobQ-like glutamine amidotransferase domain Tbon_07375 PF01790 Prolipoprotein diacylglyceryl transferase Tbon_07385 PF08241 Methyltransferase domain Tbon_07400 PF00890 FAD binding domain Tbon_07400 PF14537 Cytochrome c3 Tbon_07425 PF00378 Enoyl-CoA hydratase/isomerase Tbon_07430 PF12697 Alpha/beta hydrolase family Tbon_07435 PF13419 Haloacid dehalogenase-like hydrolase Tbon_07440 PF12706 Beta-lactamase superfamily domain Tbon_07450 PF00072 Response regulator receiver domain Tbon_07450 PF00486 Transcriptional regulatory protein, C terminal Tbon_07455 PF01638 HxlR-like helix-turn-helix Tbon_07460 PF05257 CHAP domain Tbon_07460 PF01476 LysM domain Tbon_07465 PF03773 Predicted permease Tbon_07475 PF07676 WD40-like Beta Propeller Repeat Tbon_07475 PF04052 TolB amino-terminal domain Tbon_07495 PF00106 short chain dehydrogenase Tbon_07500 PF10145 Phage-related minor tail protein Tbon_07500 PF01551 Peptidase family M23 Tbon_07500 PF01464 Transglycosylase SLT domain Tbon_07510 PF00534 Glycosyl transferases group 1 Tbon_07510 PF13439 Glycosyltransferase Family 4 Tbon_07520 PF11066 Protein of unknown function (DUF2867) Tbon_07520 PF13460 NAD(P)H-binding Tbon_07540 PF00291 Pyridoxal-phosphate dependent enzyme Tbon_07545 PF01209 ubiE/COQ5 methyltransferase family Tbon_07560 PF01546 Peptidase family M20/M25/M40 Tbon_07560 PF07687 Peptidase dimerisation domain Tbon_07570 PF03576 Peptidase family S58 Tbon_07575 PF00300 Histidine phosphatase superfamily (branch 1) Tbon_07590 PF12857 TOBE-like domain Tbon_07590 PF00005 ABC transporter Tbon_07595 PF00528 Binding-protein-dependent transport system inner membrane component Tbon_07600 PF12849 PBP superfamily domain Tbon_07605 PF12146 Serine aminopeptidase, S33 Tbon_07610 PF00814 Glycoprotease family Tbon_07625 PF00296 Luciferase-like monooxygenase Tbon_07635 PF06965 Na+/H+ antiporter 1 Tbon_07635 PF13462 Thioredoxin Tbon_07650 PF00528 Binding-protein-dependent transport system inner membrane component Tbon_07660 PF00067 Cytochrome P450 Tbon_07665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tbon_07665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tbon_07665 PF02770 Acyl-CoA dehydrogenase, middle domain Tbon_07680 PF01370 NAD dependent epimerase/dehydratase family Tbon_07680 PF00391 PEP-utilising enzyme, mobile domain Tbon_07690 PF00440 Bacterial regulatory proteins, tetR family Tbon_07690 PF13977 BetI-type transcriptional repressor, C-terminal Tbon_07695 PF00676 Dehydrogenase E1 component Tbon_07700 PF02780 Transketolase, C-terminal domain Tbon_07700 PF02779 Transketolase, pyrimidine binding domain Tbon_07705 PF01513 ATP-NAD kinase Tbon_07710 PF00364 Biotin-requiring enzyme Tbon_07710 PF02817 e3 binding domain Tbon_07710 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Tbon_07715 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Tbon_07715 PF00403 Heavy-metal-associated domain Tbon_07715 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tbon_07750 PF00848 Ring hydroxylating alpha subunit (catalytic domain) Tbon_07750 PF00355 Rieske [2Fe-2S] domain Tbon_07760 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Tbon_07760 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Tbon_07770 PF00581 Rhodanese-like domain Tbon_07775 PF02657 Fe-S metabolism associated domain Tbon_07780 PF06418 CTP synthase N-terminus Tbon_07780 PF00117 Glutamine amidotransferase class-I Tbon_07790 PF03239 Iron permease FTR1 family Tbon_07820 PF05193 Peptidase M16 inactive domain Tbon_07820 PF00675 Insulinase (Peptidase family M16) Tbon_07825 PF00120 Glutamine synthetase, catalytic domain Tbon_07825 PF03951 Glutamine synthetase, beta-Grasp domain Tbon_07835 PF00135 Carboxylesterase family Tbon_07845 PF02801 Beta-ketoacyl synthase, C-terminal domain Tbon_07845 PF14765 Polyketide synthase dehydratase Tbon_07845 PF00698 Acyl transferase domain Tbon_07845 PF00109 Beta-ketoacyl synthase, N-terminal domain Tbon_07845 PF16197 Ketoacyl-synthetase C-terminal extension Tbon_07845 PF08659 KR domain Tbon_07845 PF00550 Phosphopantetheine attachment site Tbon_07845 PF08240 Alcohol dehydrogenase GroES-like domain Tbon_07870 PF01654 Cytochrome bd terminal oxidase subunit I Tbon_07880 PF00296 Luciferase-like monooxygenase Tbon_07895 PF00561 alpha/beta hydrolase fold Tbon_07895 PF08386 TAP-like protein Tbon_07900 PF01551 Peptidase family M23 Tbon_07900 PF08525 Opacity-associated protein A N-terminal motif Tbon_07900 PF01476 LysM domain Tbon_07910 PF03109 ABC1 family Tbon_07915 PF00106 short chain dehydrogenase Tbon_07920 PF01649 Ribosomal protein S20 Tbon_07925 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Tbon_07930 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Tbon_07935 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Tbon_07940 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Tbon_07945 PF00146 NADH dehydrogenase Tbon_07950 PF12838 4Fe-4S dicluster domain Tbon_07955 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Tbon_07960 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Tbon_07965 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Tbon_07965 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus Tbon_07965 PF00361 Proton-conducting membrane transporter Tbon_07970 PF00361 Proton-conducting membrane transporter Tbon_07975 PF00361 Proton-conducting membrane transporter Tbon_07985 PF07516 SecA Wing and Scaffold domain Tbon_07985 PF01043 SecA preprotein cross-linking domain Tbon_07985 PF02810 SEC-C motif Tbon_07985 PF07517 SecA DEAD-like domain Tbon_07995 PF02515 CoA-transferase family III Tbon_08015 PF02790 Cytochrome C oxidase subunit II, transmembrane domain Tbon_08015 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Tbon_08020 PF00115 Cytochrome C and Quinol oxidase polypeptide I Tbon_08030 PF00510 Cytochrome c oxidase subunit III Tbon_08045 PF01680 SOR/SNZ family Tbon_08055 PF04055 Radical SAM superfamily Tbon_08060 PF06508 Queuosine biosynthesis protein QueC Tbon_08070 PF02082 Transcriptional regulator Tbon_08075 PF00291 Pyridoxal-phosphate dependent enzyme Tbon_08080 PF00581 Rhodanese-like domain Tbon_08080 PF00899 ThiF family Tbon_08085 PF02597 ThiS family Tbon_08090 PF00291 Pyridoxal-phosphate dependent enzyme Tbon_08105 PF00210 Ferritin-like domain Tbon_08110 PF00378 Enoyl-CoA hydratase/isomerase Tbon_08125 PF00378 Enoyl-CoA hydratase/isomerase Tbon_08140 PF12706 Beta-lactamase superfamily domain Tbon_08140 PF00753 Metallo-beta-lactamase superfamily Tbon_08175 PF08502 LeuA allosteric (dimerisation) domain Tbon_08175 PF00682 HMGL-like Tbon_08195 PF00696 Amino acid kinase family Tbon_08195 PF01472 PUA domain Tbon_08210 PF02770 Acyl-CoA dehydrogenase, middle domain Tbon_08210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tbon_08210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tbon_08250 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV Tbon_08255 PF00753 Metallo-beta-lactamase superfamily Tbon_08275 PF07724 AAA domain (Cdc48 subfamily) Tbon_08275 PF17871 AAA lid domain Tbon_08275 PF02861 Clp amino terminal domain, pathogenicity island component Tbon_08275 PF10431 C-terminal, D2-small domain, of ClpB protein Tbon_08275 PF00004 ATPase family associated with various cellular activities (AAA) Tbon_08280 PF13411 MerR HTH family regulatory protein Tbon_08285 PF00684 DnaJ central domain Tbon_08285 PF00226 DnaJ domain Tbon_08285 PF01556 DnaJ C terminal domain Tbon_08290 PF00011 Hsp20/alpha crystallin family Tbon_08300 PF03966 Trm112p-like protein Tbon_08305 PF02674 Colicin V production protein Tbon_08330 PF00528 Binding-protein-dependent transport system inner membrane component Tbon_08350 PF00296 Luciferase-like monooxygenase Tbon_08360 PF00982 Glycosyltransferase family 20 Tbon_08370 PF00196 Bacterial regulatory proteins, luxR family Tbon_08370 PF00072 Response regulator receiver domain Tbon_08385 PF10458 Valyl tRNA synthetase tRNA binding arm Tbon_08385 PF00133 tRNA synthetases class I (I, L, M and V) Tbon_08385 PF08264 Anticodon-binding domain of tRNA Tbon_08395 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Tbon_08395 PF00391 PEP-utilising enzyme, mobile domain Tbon_08405 PF00271 Helicase conserved C-terminal domain Tbon_08405 PF00270 DEAD/DEAH box helicase Tbon_08410 PF00378 Enoyl-CoA hydratase/isomerase Tbon_08420 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Tbon_08420 PF00403 Heavy-metal-associated domain Tbon_08420 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tbon_08425 PF01551 Peptidase family M23 Tbon_08425 PF10145 Phage-related minor tail protein Tbon_08425 PF01464 Transglycosylase SLT domain Tbon_08435 PF01967 MoaC family Tbon_08440 PF01467 Cytidylyltransferase-like Tbon_08445 PF00118 TCP-1/cpn60 chaperonin family Tbon_08455 PF00708 Acylphosphatase Tbon_08465 PF00881 Nitroreductase family Tbon_08490 PF12867 DinB superfamily Tbon_08500 PF18324 Hypothetical protein TT1725 Tbon_08500 PF00180 Isocitrate/isopropylmalate dehydrogenase Tbon_08505 PF07690 Major Facilitator Superfamily Tbon_08510 PF00296 Luciferase-like monooxygenase Tbon_08515 PF00378 Enoyl-CoA hydratase/isomerase Tbon_08520 PF07690 Major Facilitator Superfamily Tbon_08540 PF00883 Cytosol aminopeptidase family, catalytic domain Tbon_08540 PF02789 Cytosol aminopeptidase family, N-terminal domain Tbon_08580 PF00312 Ribosomal protein S15 Tbon_08585 PF00013 KH domain Tbon_08585 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Tbon_08585 PF01138 3' exoribonuclease family, domain 1 Tbon_08585 PF03725 3' exoribonuclease family, domain 2 Tbon_08585 PF00575 S1 RNA binding domain Tbon_08610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tbon_08610 PF02770 Acyl-CoA dehydrogenase, middle domain Tbon_08610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tbon_08615 PF00990 Diguanylate cyclase, GGDEF domain Tbon_08615 PF17151 Periplasmic sensor domain Tbon_08630 PF02887 Pyruvate kinase, alpha/beta domain Tbon_08630 PF00224 Pyruvate kinase, barrel domain Tbon_08635 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Tbon_08640 PF02515 CoA-transferase family III Tbon_08645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tbon_08645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tbon_08645 PF02770 Acyl-CoA dehydrogenase, middle domain Tbon_08655 PF01488 Shikimate / quinate 5-dehydrogenase Tbon_08655 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Tbon_08655 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Tbon_08665 PF00248 Aldo/keto reductase family Tbon_08680 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tbon_08680 PF14824 Sirohaem biosynthesis protein central Tbon_08680 PF10414 Sirohaem synthase dimerisation region Tbon_08690 PF00202 Aminotransferase class-III Tbon_08695 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Tbon_08695 PF03900 Porphobilinogen deaminase, C-terminal domain Tbon_08700 PF08241 Methyltransferase domain Tbon_08710 PF09924 Uncharacterised conserved protein (DUF2156) Tbon_08710 PF03706 Lysylphosphatidylglycerol synthase TM region Tbon_08720 PF08241 Methyltransferase domain Tbon_08730 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Tbon_08730 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Tbon_08735 PF00378 Enoyl-CoA hydratase/isomerase Tbon_08765 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Tbon_08765 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Tbon_08770 PF03441 FAD binding domain of DNA photolyase Tbon_08770 PF00875 DNA photolyase Tbon_08775 PF01769 Divalent cation transporter Tbon_08775 PF00571 CBS domain Tbon_08775 PF03448 MgtE intracellular N domain Tbon_08800 PF01895 PhoU domain Tbon_08805 PF00005 ABC transporter Tbon_08810 PF00528 Binding-protein-dependent transport system inner membrane component Tbon_08815 PF00528 Binding-protein-dependent transport system inner membrane component Tbon_08820 PF12849 PBP superfamily domain Tbon_08825 PF00486 Transcriptional regulatory protein, C terminal Tbon_08825 PF00072 Response regulator receiver domain Tbon_08830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tbon_08830 PF00512 His Kinase A (phospho-acceptor) domain Tbon_08830 PF00989 PAS fold Tbon_08830 PF16736 Single Cache-like Tbon_08835 PF01636 Phosphotransferase enzyme family Tbon_08855 PF02585 GlcNAc-PI de-N-acetylase Tbon_08870 PF00132 Bacterial transferase hexapeptide (six repeats) Tbon_08875 PF00005 ABC transporter Tbon_08880 PF01061 ABC-2 type transporter Tbon_08885 PF01972 Serine dehydrogenase proteinase Tbon_08885 PF01957 NfeD-like C-terminal, partner-binding Tbon_08905 PF05491 RuvB C-terminal winged helix domain Tbon_08905 PF05496 Holliday junction DNA helicase RuvB P-loop domain Tbon_08905 PF17864 RuvB AAA lid domain Tbon_08910 PF13188 PAS domain Tbon_08910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tbon_08910 PF08448 PAS fold Tbon_08910 PF00512 His Kinase A (phospho-acceptor) domain Tbon_08910 PF00072 Response regulator receiver domain Tbon_08915 PF13520 Amino acid permease Tbon_08925 PF00689 Cation transporting ATPase, C-terminus Tbon_08925 PF00690 Cation transporter/ATPase, N-terminus Tbon_08930 PF00296 Luciferase-like monooxygenase Tbon_08940 PF11798 IMS family HHH motif Tbon_08940 PF00817 impB/mucB/samB family Tbon_08940 PF11799 impB/mucB/samB family C-terminal domain Tbon_08955 PF03948 Ribosomal protein L9, C-terminal domain Tbon_08955 PF01281 Ribosomal protein L9, N-terminal domain Tbon_08960 PF00772 DnaB-like helicase N terminal domain Tbon_08960 PF03796 DnaB-like helicase C terminal domain Tbon_08970 PF01695 IstB-like ATP binding protein Tbon_08980 PF00293 NUDIX domain Tbon_08980 PF09297 NADH pyrophosphatase zinc ribbon domain Tbon_08985 PF02391 MoaE protein Tbon_08990 PF02597 ThiS family Tbon_08995 PF17863 AAA lid domain Tbon_08995 PF07726 ATPase family associated with various cellular activities (AAA) Tbon_09030 PF04461 Protein of unknown function (DUF520) Tbon_09040 PF00155 Aminotransferase class I and II Tbon_09055 PF08546 Ketopantoate reductase PanE/ApbA C terminal Tbon_09055 PF02558 Ketopantoate reductase PanE/ApbA Tbon_09060 PF00296 Luciferase-like monooxygenase Tbon_09080 PF10442 FIST C domain Tbon_09080 PF08495 FIST N domain Tbon_09080 PF00990 Diguanylate cyclase, GGDEF domain Tbon_09080 PF00563 EAL domain Tbon_09085 PF00440 Bacterial regulatory proteins, tetR family Tbon_09085 PF17932 Tetracyclin repressor-like, C-terminal domain Tbon_09095 PF01227 GTP cyclohydrolase I Tbon_09115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tbon_09115 PF02770 Acyl-CoA dehydrogenase, middle domain Tbon_09115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tbon_09120 PF08544 GHMP kinases C terminal Tbon_09120 PF10509 Galactokinase galactose-binding signature Tbon_09120 PF00288 GHMP kinases N terminal domain Tbon_09125 PF00132 Bacterial transferase hexapeptide (six repeats) Tbon_09125 PF00483 Nucleotidyl transferase Tbon_09150 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Tbon_09155 PF02515 CoA-transferase family III Tbon_09165 PF01638 HxlR-like helix-turn-helix Tbon_09170 PF00578 AhpC/TSA family Tbon_09175 PF02780 Transketolase, C-terminal domain Tbon_09175 PF02779 Transketolase, pyrimidine binding domain Tbon_09175 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Tbon_09180 PF02779 Transketolase, pyrimidine binding domain Tbon_09180 PF00456 Transketolase, thiamine diphosphate binding domain Tbon_09180 PF02780 Transketolase, C-terminal domain Tbon_09200 PF01230 HIT domain Tbon_09210 PF01514 Secretory protein of YscJ/FliF family Tbon_09210 PF08345 Flagellar M-ring protein C-terminal Tbon_09215 PF14841 FliG middle domain Tbon_09215 PF01706 FliG C-terminal domain Tbon_09215 PF14842 FliG N-terminal domain Tbon_09225 PF18269 T3SS EscN ATPase C-terminal domain Tbon_09225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tbon_09225 PF02874 ATP synthase alpha/beta family, beta-barrel domain Tbon_09240 PF00460 Flagella basal body rod protein Tbon_09240 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tbon_09245 PF02049 Flagellar hook-basal body complex protein FliE Tbon_09255 PF03963 Flagellar hook capping protein - N-terminal region Tbon_09265 PF00460 Flagella basal body rod protein Tbon_09265 PF07559 Flagellar basal body protein FlaE Tbon_09265 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tbon_09285 PF00378 Enoyl-CoA hydratase/isomerase Tbon_09315 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Tbon_09315 PF00364 Biotin-requiring enzyme Tbon_09315 PF02817 e3 binding domain Tbon_09320 PF02779 Transketolase, pyrimidine binding domain Tbon_09320 PF02780 Transketolase, C-terminal domain Tbon_09325 PF00676 Dehydrogenase E1 component Tbon_09330 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Tbon_09330 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Tbon_09335 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Tbon_09335 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Tbon_09340 PF00156 Phosphoribosyl transferase domain Tbon_09345 PF04542 Sigma-70 region 2 Tbon_09345 PF04545 Sigma-70, region 4 Tbon_09355 PF01370 NAD dependent epimerase/dehydratase family Tbon_09365 PF00164 Ribosomal protein S12/S23 Tbon_09370 PF00177 Ribosomal protein S7p/S5e Tbon_09375 PF14492 Elongation Factor G, domain II Tbon_09375 PF00009 Elongation factor Tu GTP binding domain Tbon_09375 PF03144 Elongation factor Tu domain 2 Tbon_09375 PF03764 Elongation factor G, domain IV Tbon_09375 PF00679 Elongation factor G C-terminus Tbon_09380 PF00009 Elongation factor Tu GTP binding domain Tbon_09380 PF03144 Elongation factor Tu domain 2 Tbon_09380 PF03143 Elongation factor Tu C-terminal domain Tbon_09385 PF00338 Ribosomal protein S10p/S20e Tbon_09390 PF00297 Ribosomal protein L3 Tbon_09395 PF00573 Ribosomal protein L4/L1 family Tbon_09400 PF00276 Ribosomal protein L23 Tbon_09405 PF00181 Ribosomal Proteins L2, RNA binding domain Tbon_09405 PF03947 Ribosomal Proteins L2, C-terminal domain Tbon_09410 PF00203 Ribosomal protein S19 Tbon_09415 PF00237 Ribosomal protein L22p/L17e Tbon_09420 PF00189 Ribosomal protein S3, C-terminal domain Tbon_09420 PF07650 KH domain Tbon_09425 PF00252 Ribosomal protein L16p/L10e Tbon_09435 PF00366 Ribosomal protein S17 Tbon_09440 PF00238 Ribosomal protein L14p/L23e Tbon_09445 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Tbon_09445 PF00467 KOW motif Tbon_09450 PF00281 Ribosomal protein L5 Tbon_09450 PF00673 ribosomal L5P family C-terminus Tbon_09455 PF00253 Ribosomal protein S14p/S29e Tbon_09460 PF00410 Ribosomal protein S8 Tbon_09465 PF00347 Ribosomal protein L6 Tbon_09470 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Tbon_09475 PF03719 Ribosomal protein S5, C-terminal domain Tbon_09475 PF00333 Ribosomal protein S5, N-terminal domain Tbon_09480 PF00327 Ribosomal protein L30p/L7e Tbon_09485 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Tbon_09490 PF00344 SecY translocase Tbon_09495 PF05191 Adenylate kinase, active site lid Tbon_09500 PF00557 Metallopeptidase family M24 Tbon_09505 PF01176 Translation initiation factor 1A / IF-1 Tbon_09510 PF00444 Ribosomal protein L36 Tbon_09515 PF00416 Ribosomal protein S13/S18 Tbon_09520 PF00411 Ribosomal protein S11 Tbon_09525 PF01479 S4 domain Tbon_09525 PF00163 Ribosomal protein S4/S9 N-terminal domain Tbon_09530 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Tbon_09530 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Tbon_09530 PF01000 RNA polymerase Rpb3/RpoA insert domain Tbon_09535 PF01196 Ribosomal protein L17 Tbon_09540 PF01416 tRNA pseudouridine synthase Tbon_09545 PF00572 Ribosomal protein L13 Tbon_09550 PF00380 Ribosomal protein S9/S16 Tbon_09570 PF00561 alpha/beta hydrolase fold Tbon_09575 PF07584 Aerotolerance regulator N-terminal Tbon_09575 PF13519 von Willebrand factor type A domain Tbon_09580 PF01882 Protein of unknown function DUF58 Tbon_09585 PF17863 AAA lid domain Tbon_09585 PF07726 ATPase family associated with various cellular activities (AAA) Tbon_09595 PF02515 CoA-transferase family III Tbon_09610 PF01039 Carboxyl transferase domain Tbon_09615 PF02515 CoA-transferase family III Tbon_09640 PF02913 FAD linked oxidases, C-terminal domain Tbon_09640 PF01565 FAD binding domain Tbon_09650 PF13361 UvrD-like helicase C-terminal domain Tbon_09650 PF00580 UvrD/REP helicase N-terminal domain Tbon_09650 PF12705 PD-(D/E)XK nuclease superfamily Tbon_09665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tbon_09665 PF02770 Acyl-CoA dehydrogenase, middle domain Tbon_09665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tbon_09670 PF00950 ABC 3 transport family Tbon_09675 PF00005 ABC transporter Tbon_09680 PF01297 Zinc-uptake complex component A periplasmic Tbon_09680 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment Tbon_09685 PF13175 AAA ATPase domain Tbon_09695 PF00512 His Kinase A (phospho-acceptor) domain Tbon_09695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tbon_09695 PF00989 PAS fold Tbon_09700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tbon_09720 PF00561 alpha/beta hydrolase fold Tbon_09720 PF00364 Biotin-requiring enzyme Tbon_09725 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Tbon_09725 PF01872 RibD C-terminal domain Tbon_09750 PF08544 GHMP kinases C terminal Tbon_09750 PF00288 GHMP kinases N terminal domain Tbon_09755 PF00497 Bacterial extracellular solute-binding proteins, family 3 Tbon_09760 PF00528 Binding-protein-dependent transport system inner membrane component Tbon_09765 PF00005 ABC transporter Tbon_09775 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Tbon_09785 PF00156 Phosphoribosyl transferase domain Tbon_09785 PF05139 Erythromycin esterase Tbon_09790 PF12826 Helix-hairpin-helix motif Tbon_09790 PF01541 GIY-YIG catalytic domain Tbon_09790 PF08459 UvrC Helix-hairpin-helix N-terminal Tbon_09790 PF02151 UvrB/uvrC motif Tbon_09810 PF00082 Subtilase family Tbon_09810 PF06280 Fn3-like domain Tbon_09810 PF00746 LPXTG cell wall anchor motif Tbon_09810 PF02225 PA domain Tbon_09815 PF01476 LysM domain Tbon_09815 PF05257 CHAP domain Tbon_09825 PF02515 CoA-transferase family III Tbon_09830 PF02515 CoA-transferase family III Tbon_09835 PF00881 Nitroreductase family Tbon_09850 PF00561 alpha/beta hydrolase fold Tbon_09855 PF04060 Putative Fe-S cluster Tbon_09860 PF01329 Pterin 4 alpha carbinolamine dehydratase Tbon_09905 PF00700 Bacterial flagellin C-terminal helical region Tbon_09905 PF00669 Bacterial flagellin N-terminal helical region Tbon_09910 PF00669 Bacterial flagellin N-terminal helical region Tbon_09910 PF00700 Bacterial flagellin C-terminal helical region Tbon_09915 PF00700 Bacterial flagellin C-terminal helical region Tbon_09915 PF00669 Bacterial flagellin N-terminal helical region Tbon_09925 PF00834 Ribulose-phosphate 3 epimerase family Tbon_09930 PF02645 Uncharacterised protein, DegV family COG1307 Tbon_09935 PF17191 RecG wedge domain Tbon_09935 PF00271 Helicase conserved C-terminal domain Tbon_09935 PF00270 DEAD/DEAH box helicase Tbon_09940 PF18073 Rubredoxin metal binding domain Tbon_09945 PF01098 Cell cycle protein Tbon_09950 PF03717 Penicillin-binding Protein dimerisation domain Tbon_09950 PF00905 Penicillin binding protein transpeptidase domain Tbon_09960 PF04085 rod shape-determining protein MreC Tbon_09970 PF01653 NAD-dependent DNA ligase adenylation domain Tbon_09970 PF03120 NAD-dependent DNA ligase OB-fold domain Tbon_09970 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Tbon_09970 PF12826 Helix-hairpin-helix motif Tbon_09970 PF00533 BRCA1 C Terminus (BRCT) domain Tbon_09975 PF00117 Glutamine amidotransferase class-I Tbon_09980 PF00977 Histidine biosynthesis protein Tbon_09985 PF00977 Histidine biosynthesis protein Tbon_09990 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Tbon_09990 PF01502 Phosphoribosyl-AMP cyclohydrolase Tbon_10005 PF02040 Arsenical pump membrane protein Tbon_10020 PF00561 alpha/beta hydrolase fold Tbon_10025 PF00107 Zinc-binding dehydrogenase Tbon_10025 PF08240 Alcohol dehydrogenase GroES-like domain Tbon_10030 PF00224 Pyruvate kinase, barrel domain Tbon_10030 PF02887 Pyruvate kinase, alpha/beta domain Tbon_10035 PF00534 Glycosyl transferases group 1 Tbon_10035 PF13439 Glycosyltransferase Family 4 Tbon_10040 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Tbon_10040 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Tbon_10040 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Tbon_10060 PF08240 Alcohol dehydrogenase GroES-like domain Tbon_10060 PF00107 Zinc-binding dehydrogenase Tbon_10065 PF08534 Redoxin Tbon_10070 PF09055 Nickel-containing superoxide dismutase Tbon_10075 PF02881 SRP54-type protein, helical bundle domain Tbon_10075 PF00448 SRP54-type protein, GTPase domain Tbon_10075 PF02978 Signal peptide binding domain Tbon_10080 PF00886 Ribosomal protein S16 Tbon_10090 PF01782 RimM N-terminal domain Tbon_10090 PF05239 PRC-barrel domain Tbon_10105 PF00037 4Fe-4S binding domain Tbon_10110 PF03466 LysR substrate binding domain Tbon_10110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tbon_10115 PF12804 MobA-like NTP transferase domain Tbon_10115 PF00132 Bacterial transferase hexapeptide (six repeats) Tbon_10125 PF01906 Putative heavy-metal-binding Tbon_10130 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Tbon_10130 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Tbon_10135 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Tbon_10135 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Tbon_10140 PF01226 Formate/nitrite transporter Tbon_10165 PF01047 MarR family Tbon_10185 PF00152 tRNA synthetases class II (D, K and N) Tbon_10185 PF01336 OB-fold nucleic acid binding domain Tbon_10185 PF02938 GAD domain Tbon_10190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tbon_10195 PF00528 Binding-protein-dependent transport system inner membrane component Tbon_10205 PF05698 Bacterial trigger factor protein (TF) C-terminus Tbon_10205 PF05697 Bacterial trigger factor protein (TF) Tbon_10210 PF00574 Clp protease Tbon_10215 PF06689 ClpX C4-type zinc finger Tbon_10215 PF07724 AAA domain (Cdc48 subfamily) Tbon_10215 PF10431 C-terminal, D2-small domain, of ClpB protein Tbon_10230 PF00293 NUDIX domain Tbon_10230 PF13344 Haloacid dehalogenase-like hydrolase Tbon_10235 PF03358 NADPH-dependent FMN reductase Tbon_10240 PF00294 pfkB family carbohydrate kinase Tbon_10255 PF00885 6,7-dimethyl-8-ribityllumazine synthase Tbon_10260 PF00925 GTP cyclohydrolase II Tbon_10260 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Tbon_10265 PF00677 Lumazine binding domain Tbon_10285 PF01523 Putative modulator of DNA gyrase Tbon_10290 PF01523 Putative modulator of DNA gyrase Tbon_10300 PF01592 NifU-like N terminal domain Tbon_10305 PF01040 UbiA prenyltransferase family Tbon_10310 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Tbon_10310 PF04073 Aminoacyl-tRNA editing domain Tbon_10310 PF03129 Anticodon binding domain Tbon_10315 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Tbon_10315 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Tbon_10320 PF01648 4'-phosphopantetheinyl transferase superfamily Tbon_10325 PF01256 Carbohydrate kinase Tbon_10325 PF03853 YjeF-related protein N-terminus Tbon_10330 PF00109 Beta-ketoacyl synthase, N-terminal domain Tbon_10330 PF02801 Beta-ketoacyl synthase, C-terminal domain Tbon_10335 PF01368 DHH family Tbon_10335 PF17768 RecJ OB domain Tbon_10335 PF02272 DHHA1 domain Tbon_10335 PF10141 Single-strand DNA-specific exonuclease, C terminal domain Tbon_10345 PF02899 Phage integrase, N-terminal SAM-like domain Tbon_10345 PF00589 Phage integrase family Tbon_10350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tbon_10350 PF02770 Acyl-CoA dehydrogenase, middle domain Tbon_10350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tbon_10360 PF02541 Ppx/GppA phosphatase family Tbon_10365 PF00300 Histidine phosphatase superfamily (branch 1) Tbon_10395 PF03787 RAMP superfamily Tbon_10400 PF03787 RAMP superfamily Tbon_10410 PF18211 Csm1 subunit domain B Tbon_10420 PF12462 DNA helicase IV / RNA helicase N terminal Tbon_10420 PF12462 DNA helicase IV / RNA helicase N terminal Tbon_10420 PF00580 UvrD/REP helicase N-terminal domain Tbon_10420 PF13361 UvrD-like helicase C-terminal domain Tbon_10420 PF00580 UvrD/REP helicase N-terminal domain Tbon_10420 PF13361 UvrD-like helicase C-terminal domain Tbon_10425 PF09827 CRISPR associated protein Cas2 Tbon_10430 PF00271 Helicase conserved C-terminal domain Tbon_10430 PF00176 SNF2 family N-terminal domain Tbon_10450 PF01966 HD domain Tbon_10460 PF03641 Possible lysine decarboxylase Tbon_10480 PF02754 Cysteine-rich domain Tbon_10485 PF11870 Domain of unknown function (DUF3390) Tbon_10485 PF02589 LUD domain Tbon_10485 PF13183 4Fe-4S dicluster domain Tbon_10490 PF00072 Response regulator receiver domain Tbon_10490 PF13188 PAS domain Tbon_10490 PF08448 PAS fold Tbon_10490 PF00512 His Kinase A (phospho-acceptor) domain Tbon_10490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tbon_10495 PF00753 Metallo-beta-lactamase superfamily Tbon_10495 PF16123 Hydroxyacylglutathione hydrolase C-terminus Tbon_10515 PF13458 Periplasmic binding protein Tbon_10520 PF02653 Branched-chain amino acid transport system / permease component Tbon_10525 PF02653 Branched-chain amino acid transport system / permease component Tbon_10525 PF11862 Domain of unknown function (DUF3382) Tbon_10530 PF12399 Branched-chain amino acid ATP-binding cassette transporter Tbon_10530 PF00005 ABC transporter Tbon_10535 PF00005 ABC transporter Tbon_10545 PF02515 CoA-transferase family III Tbon_10550 PF02515 CoA-transferase family III Tbon_10555 PF00561 alpha/beta hydrolase fold Tbon_10560 PF01568 Molydopterin dinucleotide binding domain Tbon_10560 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Tbon_10560 PF00384 Molybdopterin oxidoreductase Tbon_10560 PF12838 4Fe-4S dicluster domain Tbon_10560 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Tbon_10565 PF00037 4Fe-4S binding domain Tbon_10570 PF07690 Major Facilitator Superfamily Tbon_10575 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Tbon_10575 PF00056 lactate/malate dehydrogenase, NAD binding domain Tbon_10580 PF00679 Elongation factor G C-terminus Tbon_10580 PF06421 GTP-binding protein LepA C-terminus Tbon_10580 PF00009 Elongation factor Tu GTP binding domain Tbon_10580 PF03144 Elongation factor Tu domain 2 Tbon_10590 PF01156 Inosine-uridine preferring nucleoside hydrolase Tbon_10600 PF00483 Nucleotidyl transferase Tbon_10605 PF05198 Translation initiation factor IF-3, N-terminal domain Tbon_10605 PF00707 Translation initiation factor IF-3, C-terminal domain Tbon_10610 PF01632 Ribosomal protein L35 Tbon_10615 PF00453 Ribosomal protein L20 Tbon_10620 PF01061 ABC-2 type transporter Tbon_10625 PF00005 ABC transporter Tbon_10630 PF02325 YGGT family Tbon_10635 PF02325 YGGT family Tbon_10640 PF03807 NADP oxidoreductase coenzyme F420-dependent Tbon_10640 PF14748 Pyrroline-5-carboxylate reductase dimerisation Tbon_10645 PF01168 Alanine racemase, N-terminal domain Tbon_10655 PF00317 Ribonucleotide reductase, all-alpha domain Tbon_10655 PF02867 Ribonucleotide reductase, barrel domain Tbon_10655 PF03477 ATP cone domain Tbon_10665 PF03477 ATP cone domain Tbon_10675 PF08447 PAS fold Tbon_10675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tbon_10675 PF13426 PAS domain Tbon_10685 PF13085 2Fe-2S iron-sulfur cluster binding domain Tbon_10685 PF13183 4Fe-4S dicluster domain Tbon_10690 PF02910 Fumarate reductase flavoprotein C-term Tbon_10690 PF00890 FAD binding domain Tbon_10700 PF00293 NUDIX domain Tbon_10715 PF02824 TGS domain Tbon_10715 PF03129 Anticodon binding domain Tbon_10715 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Tbon_10715 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Tbon_10730 PF01121 Dephospho-CoA kinase Tbon_10760 PF01966 HD domain Tbon_10765 PF18357 Diphteria toxin repressor SH3 domain Tbon_10765 PF02742 Iron dependent repressor, metal binding and dimerisation domain Tbon_10765 PF01325 Iron dependent repressor, N-terminal DNA binding domain Tbon_10770 PF10400 Virulence activator alpha C-term Tbon_10770 PF03551 Transcriptional regulator PadR-like family Tbon_10800 PF00535 Glycosyl transferase family 2 Tbon_10805 PF02660 Glycerol-3-phosphate acyltransferase Tbon_10835 PF03819 MazG nucleotide pyrophosphohydrolase domain Tbon_10835 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tbon_10840 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Tbon_10840 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Tbon_10845 PF08323 Starch synthase catalytic domain Tbon_10845 PF00534 Glycosyl transferases group 1 Tbon_10855 PF11897 Protein of unknown function (DUF3417) Tbon_10855 PF00343 Carbohydrate phosphorylase Tbon_10860 PF13419 Haloacid dehalogenase-like hydrolase Tbon_10865 PF14698 Argininosuccinate lyase C-terminal Tbon_10865 PF00206 Lyase Tbon_10885 PF02601 Exonuclease VII, large subunit Tbon_10885 PF13742 OB-fold nucleic acid binding domain Tbon_10890 PF08207 Elongation factor P (EF-P) KOW-like domain Tbon_10890 PF01132 Elongation factor P (EF-P) OB domain Tbon_10890 PF09285 Elongation factor P, C-terminal Tbon_10895 PF00557 Metallopeptidase family M24 Tbon_10895 PF01321 Creatinase/Prolidase N-terminal domain Tbon_10900 PF01220 Dehydroquinase class II Tbon_10905 PF02899 Phage integrase, N-terminal SAM-like domain Tbon_10905 PF00589 Phage integrase family Tbon_10910 PF01396 Topoisomerase DNA binding C4 zinc finger Tbon_10910 PF01131 DNA topoisomerase Tbon_10910 PF01751 Toprim domain Tbon_10915 PF02481 DNA recombination-mediator protein A Tbon_10915 PF17782 DprA winged helix domain Tbon_10920 PF03471 Transporter associated domain Tbon_10920 PF01595 Cyclin M transmembrane N-terminal domain Tbon_10920 PF00571 CBS domain Tbon_10925 PF00132 Bacterial transferase hexapeptide (six repeats) Tbon_10925 PF12804 MobA-like NTP transferase domain Tbon_10930 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Tbon_10930 PF01411 tRNA synthetases class II (A) Tbon_10930 PF02272 DHHA1 domain Tbon_10940 PF03652 Holliday junction resolvase Tbon_10945 PF02618 YceG-like family Tbon_10950 PF08501 Shikimate dehydrogenase substrate binding domain Tbon_10950 PF01488 Shikimate / quinate 5-dehydrogenase Tbon_10950 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Tbon_10960 PF01264 Chorismate synthase Tbon_10965 PF01761 3-dehydroquinate synthase Tbon_10970 PF01702 Queuine tRNA-ribosyltransferase Tbon_11000 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase Tbon_11005 PF07685 CobB/CobQ-like glutamine amidotransferase domain Tbon_11005 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Tbon_11010 PF00155 Aminotransferase class I and II Tbon_11015 PF03186 CobD/Cbib protein Tbon_11025 PF02277 Phosphoribosyltransferase Tbon_11030 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Tbon_11035 PF00005 ABC transporter Tbon_11045 PF01032 FecCD transport family Tbon_11050 PF00753 Metallo-beta-lactamase superfamily Tbon_11055 PF03009 Glycerophosphoryl diester phosphodiesterase family Tbon_11065 PF03450 CO dehydrogenase flavoprotein C-terminal domain Tbon_11065 PF00941 FAD binding domain in molybdopterin dehydrogenase Tbon_11070 PF00111 2Fe-2S iron-sulfur cluster binding domain Tbon_11070 PF01799 [2Fe-2S] binding domain Tbon_11075 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Tbon_11075 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Tbon_11085 PF00547 Urease, gamma subunit Tbon_11090 PF00699 Urease beta subunit Tbon_11090 PF00547 Urease, gamma subunit Tbon_11095 PF01979 Amidohydrolase family Tbon_11095 PF00449 Urease alpha-subunit, N-terminal domain Tbon_11100 PF01730 UreF Tbon_11105 PF02492 CobW/HypB/UreG, nucleotide-binding domain Tbon_11120 PF02653 Branched-chain amino acid transport system / permease component Tbon_11130 PF00005 ABC transporter Tbon_11130 PF12399 Branched-chain amino acid ATP-binding cassette transporter Tbon_11135 PF00005 ABC transporter Tbon_11150 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Tbon_11150 PF01367 5'-3' exonuclease, C-terminal SAM fold Tbon_11150 PF00476 DNA polymerase family A Tbon_11150 PF01612 3'-5' exonuclease Tbon_11155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tbon_11155 PF02770 Acyl-CoA dehydrogenase, middle domain Tbon_11155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tbon_11160 PF00005 ABC transporter Tbon_11160 PF13732 Domain of unknown function (DUF4162) Tbon_11175 PF02515 CoA-transferase family III Tbon_11190 PF00085 Thioredoxin Tbon_11195 PF18152 DAHP synthase ferredoxin-like domain Tbon_11195 PF00793 DAHP synthetase I family Tbon_11200 PF00106 short chain dehydrogenase Tbon_11205 PF00989 PAS fold Tbon_11205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tbon_11205 PF00512 His Kinase A (phospho-acceptor) domain Tbon_11210 PF13350 Tyrosine phosphatase family Tbon_11215 PF01546 Peptidase family M20/M25/M40 Tbon_11215 PF07687 Peptidase dimerisation domain Tbon_11230 PF12804 MobA-like NTP transferase domain Tbon_11240 PF00583 Acetyltransferase (GNAT) family Tbon_11255 PF00364 Biotin-requiring enzyme Tbon_11255 PF02817 e3 binding domain Tbon_11255 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Tbon_11260 PF02780 Transketolase, C-terminal domain Tbon_11260 PF02779 Transketolase, pyrimidine binding domain Tbon_11265 PF00676 Dehydrogenase E1 component Tbon_11270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Tbon_11270 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tbon_11280 PF00202 Aminotransferase class-III Tbon_11290 PF00248 Aldo/keto reductase family Tbon_11295 PF00459 Inositol monophosphatase family Tbon_11300 PF09157 Pseudouridine synthase II TruB, C-terminal Tbon_11300 PF16198 tRNA pseudouridylate synthase B C-terminal domain Tbon_11300 PF01509 TruB family pseudouridylate synthase (N terminal domain) Tbon_11310 PF00009 Elongation factor Tu GTP binding domain Tbon_11310 PF11987 Translation-initiation factor 2 Tbon_11310 PF04760 Translation initiation factor IF-2, N-terminal region Tbon_11315 PF04296 Protein of unknown function (DUF448) Tbon_11320 PF08529 NusA N-terminal domain Tbon_11320 PF00575 S1 RNA binding domain Tbon_11320 PF13184 NusA-like KH domain Tbon_11325 PF00266 Aminotransferase class-V Tbon_11330 PF00550 Phosphopantetheine attachment site Tbon_11335 PF02801 Beta-ketoacyl synthase, C-terminal domain Tbon_11335 PF00109 Beta-ketoacyl synthase, N-terminal domain Tbon_11340 PF02801 Beta-ketoacyl synthase, C-terminal domain Tbon_11340 PF00109 Beta-ketoacyl synthase, N-terminal domain Tbon_11345 PF00698 Acyl transferase domain Tbon_11350 PF18074 Primosomal protein N C-terminal domain Tbon_11350 PF00271 Helicase conserved C-terminal domain Tbon_11350 PF17764 3′ DNA-binding domain (3′BD) Tbon_11350 PF04851 Type III restriction enzyme, res subunit Tbon_11350 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Tbon_11355 PF07690 Major Facilitator Superfamily Tbon_11370 PF03372 Endonuclease/Exonuclease/phosphatase family Tbon_11375 PF05977 Transmembrane secretion effector Tbon_11410 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Tbon_11410 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Tbon_11415 PF02457 DisA bacterial checkpoint controller nucleotide-binding Tbon_11425 PF01926 50S ribosome-binding GTPase Tbon_11425 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Tbon_11430 PF02660 Glycerol-3-phosphate acyltransferase Tbon_11435 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Tbon_11435 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Tbon_11445 PF00293 NUDIX domain Tbon_11445 PF13344 Haloacid dehalogenase-like hydrolase Tbon_11460 PF01497 Periplasmic binding protein Tbon_11465 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase Tbon_11470 PF01259 SAICAR synthetase Tbon_11480 PF10397 Adenylosuccinate lyase C-terminus Tbon_11480 PF00206 Lyase Tbon_11485 PF02844 Phosphoribosylglycinamide synthetase, N domain Tbon_11485 PF02843 Phosphoribosylglycinamide synthetase, C domain Tbon_11485 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Tbon_11490 PF00958 GMP synthase C terminal domain Tbon_11490 PF02540 NAD synthase Tbon_11490 PF00117 Glutamine amidotransferase class-I Tbon_11495 PF01300 Telomere recombination Tbon_11500 PF02502 Ribose/Galactose Isomerase Tbon_11505 PF00162 Phosphoglycerate kinase Tbon_11515 PF00121 Triosephosphate isomerase Tbon_11530 PF00155 Aminotransferase class I and II Tbon_11535 PF01926 50S ribosome-binding GTPase Tbon_11535 PF13167 GTP-binding GTPase N-terminal Tbon_11535 PF16360 GTP-binding GTPase Middle Region Tbon_11540 PF02515 CoA-transferase family III Tbon_11545 PF02515 CoA-transferase family III Tbon_11555 PF00510 Cytochrome c oxidase subunit III Tbon_11560 PF00115 Cytochrome C and Quinol oxidase polypeptide I Tbon_11565 PF02790 Cytochrome C oxidase subunit II, transmembrane domain Tbon_11565 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Tbon_11570 PF01040 UbiA prenyltransferase family Tbon_11575 PF02628 Cytochrome oxidase assembly protein Tbon_11580 PF01464 Transglycosylase SLT domain Tbon_11580 PF10145 Phage-related minor tail protein Tbon_11580 PF01551 Peptidase family M23 Tbon_11590 PF01575 MaoC like domain Tbon_11605 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Tbon_11605 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Tbon_11620 PF06441 Epoxide hydrolase N terminus Tbon_11635 PF00486 Transcriptional regulatory protein, C terminal Tbon_11635 PF00072 Response regulator receiver domain Tbon_11685 PF00300 Histidine phosphatase superfamily (branch 1) Tbon_11695 PF11734 TilS substrate C-terminal domain Tbon_11695 PF01171 PP-loop family Tbon_11700 PF00296 Luciferase-like monooxygenase Tbon_11705 PF00459 Inositol monophosphatase family Tbon_11715 PF07969 Amidohydrolase family Tbon_11720 PF03190 Protein of unknown function, DUF255 Tbon_11750 PF02770 Acyl-CoA dehydrogenase, middle domain Tbon_11750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tbon_11750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tbon_11760 PF00378 Enoyl-CoA hydratase/isomerase Tbon_11765 PF08608 Wyosine base formation Tbon_11765 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain Tbon_11770 PF02785 Biotin carboxylase C-terminal domain Tbon_11770 PF00289 Biotin carboxylase, N-terminal domain Tbon_11770 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Tbon_11770 PF00364 Biotin-requiring enzyme Tbon_11775 PF01039 Carboxyl transferase domain Tbon_11805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tbon_11805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tbon_11805 PF02770 Acyl-CoA dehydrogenase, middle domain Tbon_11810 PF00296 Luciferase-like monooxygenase Tbon_11835 PF00581 Rhodanese-like domain Tbon_11840 PF01206 Sulfurtransferase TusA Tbon_11845 PF04143 Sulphur transport Tbon_11855 PF02899 Phage integrase, N-terminal SAM-like domain Tbon_11855 PF00589 Phage integrase family Tbon_11860 PF00753 Metallo-beta-lactamase superfamily Tbon_11865 PF02515 CoA-transferase family III Tbon_11870 PF02515 CoA-transferase family III Tbon_11875 PF01590 GAF domain Tbon_11875 PF02954 Bacterial regulatory protein, Fis family Tbon_11880 PF00743 Flavin-binding monooxygenase-like Tbon_11885 PF00743 Flavin-binding monooxygenase-like Tbon_11890 PF09369 Domain of unknown function (DUF1998) Tbon_11890 PF00271 Helicase conserved C-terminal domain Tbon_11890 PF00270 DEAD/DEAH box helicase Tbon_11895 PF00176 SNF2 family N-terminal domain Tbon_11895 PF18337 RapA N-terminal Tudor like domain Tbon_11895 PF18339 RapA N-terminal Tudor like domain 1 Tbon_11895 PF00271 Helicase conserved C-terminal domain Tbon_11895 PF12137 RNA polymerase recycling family C-terminal Tbon_11920 PF14659 Phage integrase, N-terminal SAM-like domain Tbon_11920 PF00589 Phage integrase family Tbon_11955 PF02673 Bacitracin resistance protein BacA Tbon_11990 PF00072 Response regulator receiver domain Tbon_11990 PF00486 Transcriptional regulatory protein, C terminal Tbon_12005 PF09281 Taq polymerase, exonuclease Tbon_12005 PF00476 DNA polymerase family A Tbon_12005 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Tbon_12005 PF01367 5'-3' exonuclease, C-terminal SAM fold Tbon_12010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tbon_12035 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Tbon_12035 PF03129 Anticodon binding domain Tbon_12040 PF02594 Uncharacterised ACR, YggU family COG1872 Tbon_12045 PF00154 recA bacterial DNA recombination protein Tbon_12050 PF02631 RecX family Tbon_12055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tbon_12055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tbon_12055 PF02770 Acyl-CoA dehydrogenase, middle domain Tbon_12060 PF00905 Penicillin binding protein transpeptidase domain Tbon_12075 PF01433 Peptidase family M1 domain Tbon_12075 PF11838 ERAP1-like C-terminal domain Tbon_12080 PF00578 AhpC/TSA family Tbon_12085 PF00365 Phosphofructokinase Tbon_12105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Tbon_12105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Tbon_12115 PF03358 NADPH-dependent FMN reductase Tbon_12125 PF11798 IMS family HHH motif Tbon_12125 PF11799 impB/mucB/samB family C-terminal domain Tbon_12125 PF00817 impB/mucB/samB family Tbon_12130 PF07136 Protein of unknown function (DUF1385) Tbon_12135 PF01197 Ribosomal protein L31 Tbon_12140 PF01016 Ribosomal L27 protein Tbon_12145 PF00829 Ribosomal prokaryotic L21 protein Tbon_12150 PF00004 ATPase family associated with various cellular activities (AAA) Tbon_12150 PF17862 AAA+ lid domain Tbon_12150 PF01434 Peptidase family M41 Tbon_12160 PF12697 Alpha/beta hydrolase family Tbon_12165 PF00881 Nitroreductase family Tbon_12165 PF01996 F420-0:Gamma-glutamyl ligase Tbon_12185 PF00692 dUTPase Tbon_12190 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Tbon_12195 PF01245 Ribosomal protein L19 Tbon_12200 PF07690 Major Facilitator Superfamily Tbon_12210 PF00378 Enoyl-CoA hydratase/isomerase Tbon_12220 PF00749 tRNA synthetases class I (E and Q), catalytic domain Tbon_12225 PF00849 RNA pseudouridylate synthase Tbon_12225 PF01479 S4 domain Tbon_12230 PF01252 Signal peptidase (SPase) II Tbon_12235 PF00174 Oxidoreductase molybdopterin binding domain Tbon_12250 PF00072 Response regulator receiver domain Tbon_12250 PF00196 Bacterial regulatory proteins, luxR family Tbon_12260 PF00072 Response regulator receiver domain Tbon_12260 PF00196 Bacterial regulatory proteins, luxR family Tbon_12270 PF02734 DAK2 domain Tbon_12270 PF13684 Dihydroxyacetone kinase family Tbon_12275 PF00830 Ribosomal L28 family Tbon_12285 PF00561 alpha/beta hydrolase fold Tbon_12290 PF02146 Sir2 family Tbon_12295 PF01266 FAD dependent oxidoreductase Tbon_12295 PF16901 C-terminal domain of alpha-glycerophosphate oxidase Tbon_12300 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Tbon_12300 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Tbon_12310 PF05195 Aminopeptidase P, N-terminal domain Tbon_12310 PF00557 Metallopeptidase family M24 Tbon_12315 PF00326 Prolyl oligopeptidase family Tbon_12315 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region Tbon_12320 PF00551 Formyl transferase Tbon_12320 PF02911 Formyl transferase, C-terminal domain Tbon_12340 PF09335 SNARE associated Golgi protein Tbon_12345 PF00561 alpha/beta hydrolase fold Tbon_12355 PF01255 Putative undecaprenyl diphosphate synthase Tbon_12360 PF01765 Ribosome recycling factor Tbon_12365 PF00696 Amino acid kinase family Tbon_12370 PF00889 Elongation factor TS Tbon_12375 PF00318 Ribosomal protein S2 Tbon_12380 PF02237 Biotin protein ligase C terminal domain Tbon_12380 PF03099 Biotin/lipoate A/B protein ligase family Tbon_12380 PF08279 HTH domain Tbon_12385 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Tbon_12390 PF01634 ATP phosphoribosyltransferase Tbon_12390 PF08029 HisG, C-terminal domain Tbon_12400 PF00815 Histidinol dehydrogenase Tbon_12405 PF00155 Aminotransferase class I and II Tbon_12410 PF00475 Imidazoleglycerol-phosphate dehydratase Tbon_12415 PF01636 Phosphotransferase enzyme family Tbon_12425 PF00293 NUDIX domain Tbon_12430 PF01225 Mur ligase family, catalytic domain Tbon_12430 PF08245 Mur ligase middle domain Tbon_12430 PF02875 Mur ligase family, glutamate ligase domain Tbon_12435 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Tbon_12450 PF03060 Nitronate monooxygenase Tbon_12455 PF02515 CoA-transferase family III Tbon_12460 PF02515 CoA-transferase family III Tbon_12465 PF04011 LemA family Tbon_12470 PF01435 Peptidase family M48 Tbon_12490 PF02445 Quinolinate synthetase A protein Tbon_12500 PF00035 Double-stranded RNA binding motif Tbon_12500 PF14622 Ribonuclease-III-like Tbon_12505 PF02463 RecF/RecN/SMC N terminal domain Tbon_12505 PF06470 SMC proteins Flexible Hinge Domain Tbon_12510 PF00448 SRP54-type protein, GTPase domain Tbon_12510 PF02881 SRP54-type protein, helical bundle domain Tbon_12530 PF01593 Flavin containing amine oxidoreductase Tbon_12540 PF00037 4Fe-4S binding domain Tbon_12540 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Tbon_12540 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Tbon_12545 PF01624 MutS domain I Tbon_12545 PF05188 MutS domain II Tbon_12545 PF00488 MutS domain V Tbon_12545 PF05190 MutS family domain IV Tbon_12545 PF05192 MutS domain III Tbon_12550 PF01119 DNA mismatch repair protein, C-terminal domain Tbon_12550 PF08676 MutL C terminal dimerisation domain Tbon_12580 PF00378 Enoyl-CoA hydratase/isomerase Tbon_12585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tbon_12585 PF02770 Acyl-CoA dehydrogenase, middle domain Tbon_12585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tbon_12590 PF14489 QueF-like protein Tbon_12595 PF03853 YjeF-related protein N-terminus Tbon_12600 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Tbon_12605 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Tbon_12610 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Tbon_12615 PF00146 NADH dehydrogenase Tbon_12620 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Tbon_12625 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Tbon_12635 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus Tbon_12635 PF00361 Proton-conducting membrane transporter Tbon_12635 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Tbon_12640 PF00361 Proton-conducting membrane transporter Tbon_12640 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus Tbon_12645 PF00361 Proton-conducting membrane transporter Tbon_12650 PF02130 Uncharacterized protein family UPF0054 Tbon_12660 PF02575 YbaB/EbfC DNA-binding family Tbon_12665 PF02132 RecR protein Tbon_12665 PF13662 Toprim domain Tbon_12665 PF00633 Helix-hairpin-helix motif Tbon_12670 PF02565 Recombination protein O C terminal Tbon_12670 PF11967 Recombination protein O N terminal Tbon_12680 PF00348 Polyprenyl synthetase Tbon_12685 PF01026 TatD related DNase Tbon_12690 PF09334 tRNA synthetases class I (M) Tbon_12690 PF08264 Anticodon-binding domain of tRNA Tbon_12695 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tbon_12700 PF00571 CBS domain Tbon_12700 PF00478 IMP dehydrogenase / GMP reductase domain Tbon_12715 PF17827 PrmC N-terminal domain Tbon_12715 PF05175 Methyltransferase small domain Tbon_12720 PF03462 PCRF domain Tbon_12720 PF00472 RF-1 domain Tbon_12725 PF07977 FabA-like domain Tbon_12735 PF13277 YmdB-like protein Tbon_12740 PF01966 HD domain Tbon_12740 PF12072 Domain of unknown function (DUF3552) Tbon_12740 PF00013 KH domain Tbon_12745 PF03458 UPF0126 domain Tbon_12760 PF11838 ERAP1-like C-terminal domain Tbon_12760 PF01433 Peptidase family M1 domain Tbon_12765 PF00425 chorismate binding enzyme Tbon_12770 PF16582 Middle domain of thiamine pyrophosphate Tbon_12770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tbon_12770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Tbon_12775 PF00561 alpha/beta hydrolase fold Tbon_12780 PF00378 Enoyl-CoA hydratase/isomerase Tbon_12785 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Tbon_12785 PF13378 Enolase C-terminal domain-like Tbon_12790 PF00501 AMP-binding enzyme Tbon_12790 PF13193 AMP-binding enzyme C-terminal domain Tbon_12795 PF00296 Luciferase-like monooxygenase Tbon_12800 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Tbon_12800 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Tbon_12800 PF13288 DXP reductoisomerase C-terminal domain Tbon_12805 PF02163 Peptidase family M50 Tbon_12805 PF13180 PDZ domain Tbon_12820 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Tbon_12820 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Tbon_12825 PF00890 FAD binding domain Tbon_12825 PF02910 Fumarate reductase flavoprotein C-term Tbon_12830 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Tbon_12830 PF00289 Biotin carboxylase, N-terminal domain Tbon_12830 PF02785 Biotin carboxylase C-terminal domain Tbon_12835 PF02436 Conserved carboxylase domain Tbon_12835 PF00682 HMGL-like Tbon_12835 PF00364 Biotin-requiring enzyme Tbon_12845 PF03990 G5-linked-Ubiquitin-like domain Tbon_12845 PF06725 3D domain Tbon_12845 PF07501 G5 domain Tbon_12850 PF00398 Ribosomal RNA adenine dimethylase Tbon_12855 PF08544 GHMP kinases C terminal Tbon_12855 PF00288 GHMP kinases N terminal domain Tbon_12890 PF00206 Lyase Tbon_12890 PF10415 Fumarase C C-terminus Tbon_12900 PF01230 HIT domain Tbon_12905 PF01138 3' exoribonuclease family, domain 1 Tbon_12905 PF03725 3' exoribonuclease family, domain 2 Tbon_12910 PF12706 Beta-lactamase superfamily domain Tbon_12930 PF01883 Iron-sulfur cluster assembly protein Tbon_12930 PF10609 NUBPL iron-transfer P-loop NTPase Tbon_12940 PF01180 Dihydroorotate dehydrogenase Tbon_12945 PF08240 Alcohol dehydrogenase GroES-like domain Tbon_12950 PF01118 Semialdehyde dehydrogenase, NAD binding domain Tbon_12950 PF02774 Semialdehyde dehydrogenase, dimerisation domain Tbon_12955 PF01960 ArgJ family Tbon_12960 PF00696 Amino acid kinase family Tbon_12965 PF13089 Polyphosphate kinase N-terminal domain Tbon_12965 PF17941 Polyphosphate kinase C-terminal domain 1 Tbon_12965 PF13090 Polyphosphate kinase C-terminal domain 2 Tbon_12965 PF02503 Polyphosphate kinase middle domain Tbon_12970 PF00202 Aminotransferase class-III Tbon_12980 PF00764 Arginosuccinate synthase Tbon_12990 PF00128 Alpha amylase, catalytic domain Tbon_12995 PF02308 MgtC family Tbon_13000 PF08264 Anticodon-binding domain of tRNA Tbon_13000 PF00133 tRNA synthetases class I (I, L, M and V) Tbon_13000 PF13603 Leucyl-tRNA synthetase, Domain 2 Tbon_13000 PF09334 tRNA synthetases class I (M) Tbon_13020 PF01467 Cytidylyltransferase-like Tbon_13035 PF13180 PDZ domain Tbon_13040 PF03449 Transcription elongation factor, N-terminal Tbon_13040 PF01272 Transcription elongation factor, GreA/GreB, C-term Tbon_13045 PF00152 tRNA synthetases class II (D, K and N) Tbon_13045 PF01336 OB-fold nucleic acid binding domain Tbon_13055 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Tbon_13055 PF02403 Seryl-tRNA synthetase N-terminal domain Tbon_13070 PF08442 ATP-grasp domain Tbon_13070 PF00549 CoA-ligase Tbon_13075 PF00574 Clp protease Tbon_13085 PF01168 Alanine racemase, N-terminal domain Tbon_13085 PF14031 Putative serine dehydratase domain Tbon_13095 PF00881 Nitroreductase family Tbon_13105 PF17668 Acetyltransferase (GNAT) domain Tbon_13105 PF13530 Sterol carrier protein domain Tbon_13115 PF00753 Metallo-beta-lactamase superfamily Tbon_13120 PF00155 Aminotransferase class I and II Tbon_13120 PF00392 Bacterial regulatory proteins, gntR family Tbon_13125 PF01493 GXGXG motif Tbon_13125 PF00310 Glutamine amidotransferases class-II Tbon_13125 PF04898 Glutamate synthase central domain Tbon_13125 PF01645 Conserved region in glutamate synthase Tbon_13130 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Tbon_13130 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tbon_13135 PF00132 Bacterial transferase hexapeptide (six repeats) Tbon_13145 PF02779 Transketolase, pyrimidine binding domain Tbon_13145 PF02780 Transketolase, C-terminal domain Tbon_13145 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Tbon_13150 PF00672 HAMP domain Tbon_13150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tbon_13150 PF00512 His Kinase A (phospho-acceptor) domain Tbon_13155 PF00072 Response regulator receiver domain Tbon_13155 PF00486 Transcriptional regulatory protein, C terminal Tbon_13160 PF01791 DeoC/LacD family aldolase Tbon_13165 PF00486 Transcriptional regulatory protein, C terminal Tbon_13165 PF00072 Response regulator receiver domain Tbon_13170 PF04542 Sigma-70 region 2 Tbon_13170 PF04545 Sigma-70, region 4 Tbon_13170 PF04539 Sigma-70 region 3 Tbon_13180 PF03572 Peptidase family S41 Tbon_13180 PF01471 Putative peptidoglycan binding domain Tbon_13180 PF17820 PDZ domain Tbon_13185 PF01668 SmpB protein Tbon_13195 PF04551 GcpE protein Tbon_13210 PF00403 Heavy-metal-associated domain Tbon_13215 PF00403 Heavy-metal-associated domain Tbon_13225 PF02515 CoA-transferase family III Tbon_13230 PF08241 Methyltransferase domain Tbon_13235 PF01261 Xylose isomerase-like TIM barrel Tbon_13245 PF01380 SIS domain Tbon_13250 PF02896 PEP-utilising enzyme, TIM barrel domain Tbon_13250 PF00391 PEP-utilising enzyme, mobile domain Tbon_13250 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Tbon_13255 PF01966 HD domain Tbon_13255 PF13286 Phosphohydrolase-associated domain Tbon_13265 PF01807 CHC2 zinc finger Tbon_13265 PF08275 DNA primase catalytic core, N-terminal domain Tbon_13265 PF10410 DnaB-helicase binding domain of primase Tbon_13275 PF00072 Response regulator receiver domain Tbon_13280 PF02515 CoA-transferase family III Tbon_13285 PF09190 DALR domain Tbon_13285 PF01406 tRNA synthetases class I (C) catalytic domain Tbon_13290 PF02515 CoA-transferase family III Tbon_13305 PF04073 Aminoacyl-tRNA editing domain Tbon_13310 PF02770 Acyl-CoA dehydrogenase, middle domain Tbon_13310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tbon_13310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tbon_13315 PF12706 Beta-lactamase superfamily domain Tbon_13340 PF02687 FtsX-like permease family Tbon_13340 PF12704 MacB-like periplasmic core domain Tbon_13340 PF00005 ABC transporter Tbon_13345 PF12704 MacB-like periplasmic core domain Tbon_13345 PF00005 ABC transporter Tbon_13345 PF02687 FtsX-like permease family Tbon_13360 PF05746 DALR anticodon binding domain Tbon_13360 PF00750 tRNA synthetases class I (R) Tbon_13360 PF03485 Arginyl tRNA synthetase N terminal domain Tbon_13375 PF00459 Inositol monophosphatase family Tbon_13380 PF18146 Damage-inducible protein CinA KH domain Tbon_13380 PF00994 Probable molybdopterin binding domain Tbon_13380 PF02464 Competence-damaged protein Tbon_13390 PF01925 Sulfite exporter TauE/SafE Tbon_13400 PF01613 Flavin reductase like domain Tbon_13415 PF00266 Aminotransferase class-V Tbon_13420 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Tbon_13420 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Tbon_13425 PF00391 PEP-utilising enzyme, mobile domain Tbon_13425 PF01370 NAD dependent epimerase/dehydratase family Tbon_13440 PF05726 Pirin C-terminal cupin domain Tbon_13440 PF02678 Pirin Tbon_13445 PF02515 CoA-transferase family III Tbon_13455 PF02515 CoA-transferase family III Tbon_13465 PF00009 Elongation factor Tu GTP binding domain Tbon_13470 PF01507 Phosphoadenosine phosphosulfate reductase family Tbon_13475 PF14306 PUA-like domain Tbon_13475 PF01747 ATP-sulfurylase Tbon_13480 PF01507 Phosphoadenosine phosphosulfate reductase family Tbon_13485 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Tbon_13485 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Tbon_13495 PF00490 Delta-aminolevulinic acid dehydratase Tbon_13500 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Tbon_13500 PF00384 Molybdopterin oxidoreductase Tbon_13500 PF01568 Molydopterin dinucleotide binding domain Tbon_13500 PF12838 4Fe-4S dicluster domain Tbon_13500 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Tbon_13505 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Tbon_13505 PF12838 4Fe-4S dicluster domain Tbon_13505 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Tbon_13505 PF01568 Molydopterin dinucleotide binding domain Tbon_13505 PF00384 Molybdopterin oxidoreductase Tbon_13510 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Tbon_13510 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Tbon_13510 PF10531 SLBB domain Tbon_13525 PF02607 B12 binding domain Tbon_13525 PF13411 MerR HTH family regulatory protein Tbon_13540 PF00551 Formyl transferase Tbon_13540 PF01842 ACT domain Tbon_13545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tbon_13550 PF00528 Binding-protein-dependent transport system inner membrane component Tbon_13555 PF00528 Binding-protein-dependent transport system inner membrane component Tbon_13555 PF12911 N-terminal TM domain of oligopeptide transport permease C Tbon_13570 PF02683 Cytochrome C biogenesis protein transmembrane region Tbon_13595 PF00440 Bacterial regulatory proteins, tetR family Tbon_13595 PF13977 BetI-type transcriptional repressor, C-terminal Tbon_13600 PF00561 alpha/beta hydrolase fold Tbon_13605 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 Tbon_13605 PF07748 Glycosyl hydrolases family 38 C-terminal domain Tbon_13605 PF01074 Glycosyl hydrolases family 38 N-terminal domain Tbon_13605 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain Tbon_13605 PF09261 Alpha mannosidase middle domain Tbon_13610 PF03023 Lipid II flippase MurJ Tbon_13615 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Tbon_13615 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Tbon_13615 PF00378 Enoyl-CoA hydratase/isomerase Tbon_13620 PF01118 Semialdehyde dehydrogenase, NAD binding domain Tbon_13620 PF02774 Semialdehyde dehydrogenase, dimerisation domain