locus-tag class description LCC91_00005 PF00308 Bacterial dnaA protein LCC91_00005 PF08299 Bacterial dnaA protein helix-turn-helix LCC91_00005 PF11638 DnaA N-terminal domain LCC91_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LCC91_00010 PF02767 DNA polymerase III beta subunit, central domain LCC91_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LCC91_00015 PF01751 Toprim domain LCC91_00015 PF18053 DNA gyrase B subunit insert domain LCC91_00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCC91_00015 PF00204 DNA gyrase B LCC91_00015 PF00986 DNA gyrase B subunit, carboxyl terminus LCC91_00020 PF09820 Predicted AAA-ATPase LCC91_00020 PF08011 PD-(D/E)XK nuclease superfamily LCC91_00025 PF04055 Radical SAM superfamily LCC91_00025 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LCC91_00030 PF03099 Biotin/lipoate A/B protein ligase family LCC91_00035 PF04359 Protein of unknown function (DUF493) LCC91_00045 PF00119 ATP synthase A chain LCC91_00050 PF00137 ATP synthase subunit C LCC91_00055 PF00430 ATP synthase B/B' CF(0) LCC91_00060 PF00213 ATP synthase delta (OSCP) subunit LCC91_00065 PF02874 ATP synthase alpha/beta family, beta-barrel domain LCC91_00065 PF00306 ATP synthase alpha/beta chain, C terminal domain LCC91_00065 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LCC91_00070 PF00231 ATP synthase LCC91_00075 PF02874 ATP synthase alpha/beta family, beta-barrel domain LCC91_00075 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LCC91_00080 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LCC91_00080 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LCC91_00085 PF00561 alpha/beta hydrolase fold LCC91_00095 PF01220 Dehydroquinase class II LCC91_00100 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LCC91_00125 PF01966 HD domain LCC91_00125 PF18211 Csm1 subunit domain B LCC91_00135 PF03787 RAMP superfamily LCC91_00145 PF03787 RAMP superfamily LCC91_00155 PF09827 CRISPR associated protein Cas2 LCC91_00160 PF01867 CRISPR associated protein Cas1 LCC91_00165 PF09827 CRISPR associated protein Cas2 LCC91_00185 PF00962 Adenosine/AMP deaminase LCC91_00195 PF05280 Flagellar transcriptional activator (FlhC) LCC91_00275 PF01758 Sodium Bile acid symporter family LCC91_00295 PF00486 Transcriptional regulatory protein, C terminal LCC91_00295 PF00072 Response regulator receiver domain LCC91_00300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCC91_00305 PF00043 Glutathione S-transferase, C-terminal domain LCC91_00305 PF13417 Glutathione S-transferase, N-terminal domain LCC91_00310 PF08328 Adenylosuccinate lyase C-terminal LCC91_00310 PF00206 Lyase LCC91_00320 PF01435 Peptidase family M48 LCC91_00320 PF13181 Tetratricopeptide repeat LCC91_00325 PF01967 MoaC family LCC91_00330 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LCC91_00330 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LCC91_00340 PF00583 Acetyltransferase (GNAT) family LCC91_00340 PF13380 CoA binding domain LCC91_00340 PF13607 Succinyl-CoA ligase like flavodoxin domain LCC91_00350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LCC91_00355 PF02021 Uncharacterised protein family UPF0102 LCC91_00360 PF13580 SIS domain LCC91_00365 PF04972 BON domain LCC91_00370 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LCC91_00370 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LCC91_00375 PF00437 Type II/IV secretion system protein LCC91_00380 PF00437 Type II/IV secretion system protein LCC91_00385 PF01168 Alanine racemase, N-terminal domain LCC91_00390 PF00171 Aldehyde dehydrogenase family LCC91_00390 PF01619 Proline dehydrogenase LCC91_00390 PF14850 DNA-binding domain of Proline dehydrogenase LCC91_00390 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LCC91_00395 PF01037 Lrp/AsnC ligand binding domain LCC91_00400 PF02423 Ornithine cyclodeaminase/mu-crystallin family LCC91_00405 PF01037 Lrp/AsnC ligand binding domain LCC91_00410 PF00425 chorismate binding enzyme LCC91_00410 PF04715 Anthranilate synthase component I, N terminal region LCC91_00415 PF01042 Endoribonuclease L-PSP LCC91_00420 PF02423 Ornithine cyclodeaminase/mu-crystallin family LCC91_00425 PF00360 Phytochrome region LCC91_00425 PF08446 PAS fold LCC91_00425 PF00512 His Kinase A (phospho-acceptor) domain LCC91_00425 PF01590 GAF domain LCC91_00425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCC91_00430 PF01565 FAD binding domain LCC91_00430 PF02913 FAD linked oxidases, C-terminal domain LCC91_00435 PF00011 Hsp20/alpha crystallin family LCC91_00440 PF03466 LysR substrate binding domain LCC91_00440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCC91_00445 PF00551 Formyl transferase LCC91_00450 PF02558 Ketopantoate reductase PanE/ApbA LCC91_00450 PF08546 Ketopantoate reductase PanE/ApbA C terminal LCC91_00455 PF00132 Bacterial transferase hexapeptide (six repeats) LCC91_00455 PF12804 MobA-like NTP transferase domain LCC91_00460 PF01037 Lrp/AsnC ligand binding domain LCC91_00465 PF01380 SIS domain LCC91_00475 PF09278 MerR, DNA binding LCC91_00475 PF00376 MerR family regulatory protein LCC91_00485 PF01297 Zinc-uptake complex component A periplasmic LCC91_00490 PF02769 AIR synthase related protein, C-terminal domain LCC91_00490 PF00586 AIR synthase related protein, N-terminal domain LCC91_00495 PF00581 Rhodanese-like domain LCC91_00505 PF01925 Sulfite exporter TauE/SafE LCC91_00510 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LCC91_00515 PF00009 Elongation factor Tu GTP binding domain LCC91_00520 PF01507 Phosphoadenosine phosphosulfate reductase family LCC91_00525 PF01507 Phosphoadenosine phosphosulfate reductase family LCC91_00540 PF03009 Glycerophosphoryl diester phosphodiesterase family LCC91_00545 PF08402 TOBE domain LCC91_00545 PF00005 ABC transporter LCC91_00550 PF00528 Binding-protein-dependent transport system inner membrane component LCC91_00555 PF00528 Binding-protein-dependent transport system inner membrane component LCC91_00560 PF13416 Bacterial extracellular solute-binding protein LCC91_00565 PF01266 FAD dependent oxidoreductase LCC91_00565 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LCC91_00570 PF00455 DeoR C terminal sensor domain LCC91_00570 PF08220 DeoR-like helix-turn-helix domain LCC91_00580 PF00202 Aminotransferase class-III LCC91_00585 PF00561 alpha/beta hydrolase fold LCC91_00585 PF07021 Methionine biosynthesis protein MetW LCC91_00590 PF00561 alpha/beta hydrolase fold LCC91_00595 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) LCC91_00610 PF00571 CBS domain LCC91_00610 PF01380 SIS domain LCC91_00615 PF00999 Sodium/hydrogen exchanger family LCC91_00615 PF02080 TrkA-C domain LCC91_00615 PF02254 TrkA-N domain LCC91_00620 PF00156 Phosphoribosyl transferase domain LCC91_00625 PF01584 CheW-like domain LCC91_00630 PF02203 Tar ligand binding domain homologue LCC91_00630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCC91_00630 PF00672 HAMP domain LCC91_00635 PF00672 HAMP domain LCC91_00635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCC91_00635 PF02203 Tar ligand binding domain homologue LCC91_00640 PF00563 EAL domain LCC91_00640 PF03707 Bacterial signalling protein N terminal repeat LCC91_00640 PF00990 Diguanylate cyclase, GGDEF domain LCC91_00650 PF07690 Major Facilitator Superfamily LCC91_00660 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LCC91_00660 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LCC91_00670 PF00893 Small Multidrug Resistance protein LCC91_00675 PF00072 Response regulator receiver domain LCC91_00680 PF00072 Response regulator receiver domain LCC91_00680 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCC91_00680 PF01627 Hpt domain LCC91_00680 PF00512 His Kinase A (phospho-acceptor) domain LCC91_00680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCC91_00680 PF00989 PAS fold LCC91_00685 PF07690 Major Facilitator Superfamily LCC91_00690 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LCC91_00710 PF00549 CoA-ligase LCC91_00710 PF02629 CoA binding domain LCC91_00715 PF08442 ATP-grasp domain LCC91_00715 PF00549 CoA-ligase LCC91_00720 PF01118 Semialdehyde dehydrogenase, NAD binding domain LCC91_00740 PF00501 AMP-binding enzyme LCC91_00740 PF13193 AMP-binding enzyme C-terminal domain LCC91_00750 PF00571 CBS domain LCC91_00750 PF03471 Transporter associated domain LCC91_00755 PF00795 Carbon-nitrogen hydrolase LCC91_00760 PF02091 Glycyl-tRNA synthetase alpha subunit LCC91_00765 PF05746 DALR anticodon binding domain LCC91_00765 PF02092 Glycyl-tRNA synthetase beta subunit LCC91_00790 PF13411 MerR HTH family regulatory protein LCC91_00795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LCC91_00795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LCC91_00795 PF02770 Acyl-CoA dehydrogenase, middle domain LCC91_00800 PF00484 Carbonic anhydrase LCC91_00805 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) LCC91_00810 PF00108 Thiolase, N-terminal domain LCC91_00810 PF02803 Thiolase, C-terminal domain LCC91_00815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LCC91_00815 PF02770 Acyl-CoA dehydrogenase, middle domain LCC91_00815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LCC91_00825 PF05016 ParE toxin of type II toxin-antitoxin system, parDE LCC91_00830 PF02080 TrkA-C domain LCC91_00830 PF02254 TrkA-N domain LCC91_00835 PF02386 Cation transport protein LCC91_00840 PF02386 Cation transport protein LCC91_00845 PF02417 Chromate transporter LCC91_00855 PF00528 Binding-protein-dependent transport system inner membrane component LCC91_00860 PF00005 ABC transporter LCC91_00870 PF09347 Domain of unknown function (DUF1989) LCC91_00875 PF02785 Biotin carboxylase C-terminal domain LCC91_00875 PF00289 Biotin carboxylase, N-terminal domain LCC91_00875 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LCC91_00880 PF01425 Amidase LCC91_00890 PF01039 Carboxyl transferase domain LCC91_00895 PF00378 Enoyl-CoA hydratase/isomerase LCC91_00900 PF00289 Biotin carboxylase, N-terminal domain LCC91_00900 PF00364 Biotin-requiring enzyme LCC91_00900 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LCC91_00900 PF02785 Biotin carboxylase C-terminal domain LCC91_00905 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LCC91_00910 PF00682 HMGL-like LCC91_00925 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LCC91_00925 PF10531 SLBB domain LCC91_00925 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LCC91_00930 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LCC91_00930 PF01568 Molydopterin dinucleotide binding domain LCC91_00930 PF00384 Molybdopterin oxidoreductase LCC91_00930 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LCC91_00930 PF12838 4Fe-4S dicluster domain LCC91_00945 PF02661 Fic/DOC family LCC91_00950 PF00582 Universal stress protein family LCC91_00960 PF00005 ABC transporter LCC91_00960 PF17760 UvrA interaction domain LCC91_00960 PF17755 UvrA DNA-binding domain LCC91_00970 PF04143 Sulphur transport LCC91_00980 PF00829 Ribosomal prokaryotic L21 protein LCC91_00985 PF01016 Ribosomal L27 protein LCC91_00990 PF01926 50S ribosome-binding GTPase LCC91_00990 PF01018 GTP1/OBG LCC91_00995 PF01472 PUA domain LCC91_00995 PF00696 Amino acid kinase family LCC91_01005 PF00293 NUDIX domain LCC91_01010 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LCC91_01010 PF04073 Aminoacyl-tRNA editing domain LCC91_01010 PF03129 Anticodon binding domain LCC91_01015 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LCC91_01015 PF01464 Transglycosylase SLT domain LCC91_01025 PF00004 ATPase family associated with various cellular activities (AAA) LCC91_01025 PF05362 Lon protease (S16) C-terminal proteolytic domain LCC91_01025 PF02190 ATP-dependent protease La (LON) substrate-binding domain LCC91_01030 PF00462 Glutaredoxin LCC91_01035 PF17827 PrmC N-terminal domain LCC91_01035 PF05175 Methyltransferase small domain LCC91_01040 PF03462 PCRF domain LCC91_01040 PF00472 RF-1 domain LCC91_01045 PF01488 Shikimate / quinate 5-dehydrogenase LCC91_01045 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LCC91_01045 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LCC91_01070 PF01209 ubiE/COQ5 methyltransferase family LCC91_01085 PF03109 ABC1 family LCC91_01100 PF02938 GAD domain LCC91_01100 PF00152 tRNA synthetases class II (D, K and N) LCC91_01100 PF01336 OB-fold nucleic acid binding domain LCC91_01120 PF01618 MotA/TolQ/ExbB proton channel family LCC91_01125 PF00691 OmpA family LCC91_01125 PF13677 Membrane MotB of proton-channel complex MotA/MotB LCC91_01130 PF00072 Response regulator receiver domain LCC91_01135 PF04344 Chemotaxis phosphatase, CheZ LCC91_01140 PF01312 FlhB HrpN YscU SpaS Family LCC91_01145 PF00771 FHIPEP family LCC91_01150 PF00448 SRP54-type protein, GTPase domain LCC91_01160 PF04542 Sigma-70 region 2 LCC91_01160 PF04539 Sigma-70 region 3 LCC91_01160 PF04545 Sigma-70, region 4 LCC91_01180 PF00460 Flagella basal body rod protein LCC91_01185 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LCC91_01185 PF00460 Flagella basal body rod protein LCC91_01190 PF03963 Flagellar hook capping protein - N-terminal region LCC91_01190 PF13860 FlgD Ig-like domain LCC91_01190 PF13861 FlgD Tudor-like domain LCC91_01195 PF07559 Flagellar basal body protein FlaE LCC91_01195 PF00460 Flagella basal body rod protein LCC91_01195 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LCC91_01200 PF00460 Flagella basal body rod protein LCC91_01200 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LCC91_01205 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LCC91_01205 PF00460 Flagella basal body rod protein LCC91_01210 PF02107 Flagellar L-ring protein LCC91_01215 PF02119 Flagellar P-ring protein LCC91_01220 PF10135 Rod binding protein LCC91_01220 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LCC91_01225 PF00460 Flagella basal body rod protein LCC91_01225 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LCC91_01230 PF00669 Bacterial flagellin N-terminal helical region LCC91_01245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LCC91_01245 PF02770 Acyl-CoA dehydrogenase, middle domain LCC91_01245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LCC91_01250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LCC91_01250 PF02770 Acyl-CoA dehydrogenase, middle domain LCC91_01250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LCC91_01260 PF00118 TCP-1/cpn60 chaperonin family LCC91_01265 PF00166 Chaperonin 10 Kd subunit LCC91_01280 PF00378 Enoyl-CoA hydratase/isomerase LCC91_01285 PF00378 Enoyl-CoA hydratase/isomerase LCC91_01295 PF10411 Disulfide bond isomerase protein N-terminus LCC91_01295 PF13098 Thioredoxin-like domain LCC91_01300 PF01494 FAD binding domain LCC91_01310 PF01926 50S ribosome-binding GTPase LCC91_01310 PF06071 Protein of unknown function (DUF933) LCC91_01315 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) LCC91_01320 PF00361 Proton-conducting membrane transporter LCC91_01320 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LCC91_01325 PF03466 LysR substrate binding domain LCC91_01325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCC91_01330 PF02965 Vitamin B12 dependent methionine synthase, activation domain LCC91_01330 PF00809 Pterin binding enzyme LCC91_01330 PF02574 Homocysteine S-methyltransferase LCC91_01330 PF02310 B12 binding domain LCC91_01330 PF02607 B12 binding domain LCC91_01335 PF08361 MAATS-type transcriptional repressor, C-terminal region LCC91_01335 PF00440 Bacterial regulatory proteins, tetR family LCC91_01340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCC91_01345 PF00873 AcrB/AcrD/AcrF family LCC91_01350 PF02321 Outer membrane efflux protein LCC91_01355 PF00437 Type II/IV secretion system protein LCC91_01355 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LCC91_01360 PF01078 Magnesium chelatase, subunit ChlI LCC91_01360 PF13335 Magnesium chelatase, subunit ChlI C-terminal LCC91_01365 PF00543 Nitrogen regulatory protein P-II LCC91_01370 PF00909 Ammonium Transporter Family LCC91_01375 PF01925 Sulfite exporter TauE/SafE LCC91_01380 PF03717 Penicillin-binding Protein dimerisation domain LCC91_01380 PF00905 Penicillin binding protein transpeptidase domain LCC91_01400 PF02686 Glu-tRNAGln amidotransferase C subunit LCC91_01405 PF01425 Amidase LCC91_01420 PF02934 GatB/GatE catalytic domain LCC91_01420 PF02637 GatB domain LCC91_01430 PF00156 Phosphoribosyl transferase domain LCC91_01435 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LCC91_01445 PF00528 Binding-protein-dependent transport system inner membrane component LCC91_01450 PF12857 TOBE-like domain LCC91_01450 PF00005 ABC transporter LCC91_01465 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LCC91_01465 PF02403 Seryl-tRNA synthetase N-terminal domain LCC91_01475 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LCC91_01480 PF00270 DEAD/DEAH box helicase LCC91_01480 PF00271 Helicase conserved C-terminal domain LCC91_01485 PF00005 ABC transporter LCC91_01485 PF12848 ABC transporter LCC91_01495 PF00072 Response regulator receiver domain LCC91_01495 PF00486 Transcriptional regulatory protein, C terminal LCC91_01505 PF01207 Dihydrouridine synthase (Dus) LCC91_01510 PF02954 Bacterial regulatory protein, Fis family LCC91_01515 PF01808 AICARFT/IMPCHase bienzyme LCC91_01515 PF02142 MGS-like domain LCC91_01520 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LCC91_01525 PF02545 Maf-like protein LCC91_01535 PF06965 Na+/H+ antiporter 1 LCC91_01535 PF01343 Peptidase family S49 LCC91_01540 PF01494 FAD binding domain LCC91_01545 PF03401 Tripartite tricarboxylate transporter family receptor LCC91_01550 PF00591 Glycosyl transferase family, a/b domain LCC91_01550 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LCC91_01550 PF02885 Glycosyl transferase family, helical bundle domain LCC91_01555 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LCC91_01555 PF14572 Phosphoribosyl synthetase-associated domain LCC91_01560 PF03471 Transporter associated domain LCC91_01560 PF00999 Sodium/hydrogen exchanger family LCC91_01560 PF02080 TrkA-C domain LCC91_01565 PF00990 Diguanylate cyclase, GGDEF domain LCC91_01570 PF01625 Peptide methionine sulfoxide reductase LCC91_01590 PF00886 Ribosomal protein S16 LCC91_01595 PF05239 PRC-barrel domain LCC91_01595 PF01782 RimM N-terminal domain LCC91_01600 PF01746 tRNA (Guanine-1)-methyltransferase LCC91_01605 PF01245 Ribosomal protein L19 LCC91_01615 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LCC91_01620 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding LCC91_01620 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCC91_01620 PF10518 TAT (twin-arginine translocation) pathway signal sequence LCC91_01630 PF00448 SRP54-type protein, GTPase domain LCC91_01630 PF02881 SRP54-type protein, helical bundle domain LCC91_01635 PF00675 Insulinase (Peptidase family M16) LCC91_01635 PF05193 Peptidase M16 inactive domain LCC91_01640 PF05193 Peptidase M16 inactive domain LCC91_01650 PF01467 Cytidylyltransferase-like LCC91_01655 PF00037 4Fe-4S binding domain LCC91_01660 PF01195 Peptidyl-tRNA hydrolase LCC91_01665 PF01386 Ribosomal L25p family LCC91_01665 PF14693 Ribosomal protein TL5, C-terminal domain LCC91_01670 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LCC91_01670 PF14572 Phosphoribosyl synthetase-associated domain LCC91_01680 PF00288 GHMP kinases N terminal domain LCC91_01680 PF08544 GHMP kinases C terminal LCC91_01685 PF03550 Outer membrane lipoprotein LolB LCC91_01695 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LCC91_01695 PF06827 Zinc finger found in FPG and IleRS LCC91_01695 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LCC91_01700 PF06421 GTP-binding protein LepA C-terminus LCC91_01700 PF03144 Elongation factor Tu domain 2 LCC91_01700 PF00679 Elongation factor G C-terminus LCC91_01700 PF00009 Elongation factor Tu GTP binding domain LCC91_01705 PF14815 NUDIX domain LCC91_01705 PF00633 Helix-hairpin-helix motif LCC91_01705 PF00730 HhH-GPD superfamily base excision DNA repair protein LCC91_01715 PF02463 RecF/RecN/SMC N terminal domain LCC91_01720 PF01513 ATP-NAD kinase LCC91_01725 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LCC91_01725 PF01628 HrcA protein C terminal domain LCC91_01730 PF02646 RmuC family LCC91_01745 PF00005 ABC transporter LCC91_01750 PF00950 ABC 3 transport family LCC91_01755 PF01979 Amidohydrolase family LCC91_01760 PF02321 Outer membrane efflux protein LCC91_01765 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCC91_01770 PF00005 ABC transporter LCC91_01770 PF02687 FtsX-like permease family LCC91_01770 PF12704 MacB-like periplasmic core domain LCC91_01775 PF00005 ABC transporter LCC91_01775 PF02687 FtsX-like permease family LCC91_01775 PF12704 MacB-like periplasmic core domain LCC91_01780 PF12323 Helix-turn-helix domain LCC91_01780 PF01385 Probable transposase LCC91_01780 PF07282 Putative transposase DNA-binding domain LCC91_01785 PF05598 Transposase domain (DUF772) LCC91_01795 PF05598 Transposase domain (DUF772) LCC91_01805 PF05598 Transposase domain (DUF772) LCC91_01825 PF06733 DEAD_2 LCC91_01825 PF13307 Helicase C-terminal domain LCC91_01830 PF01261 Xylose isomerase-like TIM barrel LCC91_01835 PF05161 MOFRL family LCC91_01835 PF13660 Domain of unknown function (DUF4147) LCC91_01840 PF04055 Radical SAM superfamily LCC91_01845 PF00005 ABC transporter LCC91_01850 PF02653 Branched-chain amino acid transport system / permease component LCC91_01855 PF02653 Branched-chain amino acid transport system / permease component LCC91_01860 PF02608 ABC transporter substrate-binding protein PnrA-like LCC91_01865 PF00355 Rieske [2Fe-2S] domain LCC91_01870 PF00692 dUTPase LCC91_01895 PF01555 DNA methylase LCC91_01920 PF03591 AzlC protein LCC91_01925 PF01381 Helix-turn-helix LCC91_01940 PF00303 Thymidylate synthase LCC91_01945 PF01565 FAD binding domain LCC91_01945 PF02913 FAD linked oxidases, C-terminal domain LCC91_01955 PF03631 Virulence factor BrkB LCC91_01960 PF00672 HAMP domain LCC91_01960 PF00909 Ammonium Transporter Family LCC91_01965 PF12697 Alpha/beta hydrolase family LCC91_01970 PF01053 Cys/Met metabolism PLP-dependent enzyme LCC91_01985 PF01264 Chorismate synthase LCC91_01990 PF12832 MFS_1 like family LCC91_02000 PF00141 Peroxidase LCC91_02005 PF00563 EAL domain LCC91_02005 PF00990 Diguanylate cyclase, GGDEF domain LCC91_02005 PF03707 Bacterial signalling protein N terminal repeat LCC91_02010 PF13667 ThiC-associated domain LCC91_02010 PF01964 Radical SAM ThiC family LCC91_02015 PF01176 Translation initiation factor 1A / IF-1 LCC91_02020 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LCC91_02020 PF00749 tRNA synthetases class I (E and Q), catalytic domain LCC91_02030 PF02673 Bacitracin resistance protein BacA LCC91_02045 PF13538 UvrD-like helicase C-terminal domain LCC91_02050 PF13361 UvrD-like helicase C-terminal domain LCC91_02050 PF00580 UvrD/REP helicase N-terminal domain LCC91_02050 PF12705 PD-(D/E)XK nuclease superfamily LCC91_02055 PF17946 RecC C-terminal domain LCC91_02060 PF03449 Transcription elongation factor, N-terminal LCC91_02060 PF01272 Transcription elongation factor, GreA/GreB, C-term LCC91_02065 PF13291 ACT domain LCC91_02065 PF04607 Region found in RelA / SpoT proteins LCC91_02065 PF02824 TGS domain LCC91_02070 PF01192 RNA polymerase Rpb6 LCC91_02075 PF00625 Guanylate kinase LCC91_02080 PF08340 Domain of unknown function (DUF1732) LCC91_02080 PF03755 YicC-like family, N-terminal region LCC91_02085 PF07238 PilZ domain LCC91_02085 PF00069 Protein kinase domain LCC91_02095 PF01138 3' exoribonuclease family, domain 1 LCC91_02095 PF03725 3' exoribonuclease family, domain 2 LCC91_02100 PF01725 Ham1 family LCC91_02105 PF06969 HemN C-terminal domain LCC91_02105 PF04055 Radical SAM superfamily LCC91_02110 PF01743 Poly A polymerase head domain LCC91_02110 PF01368 DHH family LCC91_02110 PF02272 DHHA1 domain LCC91_02110 PF00571 CBS domain LCC91_02125 PF00149 Calcineurin-like phosphoesterase LCC91_02130 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LCC91_02140 PF09190 DALR domain LCC91_02140 PF01406 tRNA synthetases class I (C) catalytic domain LCC91_02145 PF02805 Metal binding domain of Ada LCC91_02145 PF06029 AlkA N-terminal domain LCC91_02145 PF00730 HhH-GPD superfamily base excision DNA repair protein LCC91_02145 PF12833 Helix-turn-helix domain LCC91_02150 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LCC91_02155 PF01171 PP-loop family LCC91_02155 PF09179 TilS substrate binding domain LCC91_02165 PF00696 Amino acid kinase family LCC91_02165 PF13840 ACT domain LCC91_02165 PF01842 ACT domain LCC91_02175 PF00710 Asparaginase, N-terminal LCC91_02175 PF17763 Glutaminase/Asparaginase C-terminal domain LCC91_02180 PF05191 Adenylate kinase, active site lid LCC91_02185 PF02348 Cytidylyltransferase LCC91_02190 PF03966 Trm112p-like protein LCC91_02195 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LCC91_02200 PF02472 Biopolymer transport protein ExbD/TolR LCC91_02205 PF01618 MotA/TolQ/ExbB proton channel family LCC91_02210 PF02601 Exonuclease VII, large subunit LCC91_02210 PF13742 OB-fold nucleic acid binding domain LCC91_02215 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LCC91_02215 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LCC91_02225 PF00180 Isocitrate/isopropylmalate dehydrogenase LCC91_02235 PF02617 ATP-dependent Clp protease adaptor protein ClpS LCC91_02240 PF07724 AAA domain (Cdc48 subfamily) LCC91_02240 PF17871 AAA lid domain LCC91_02240 PF00004 ATPase family associated with various cellular activities (AAA) LCC91_02240 PF02861 Clp amino terminal domain, pathogenicity island component LCC91_02240 PF10431 C-terminal, D2-small domain, of ClpB protein LCC91_02245 PF02805 Metal binding domain of Ada LCC91_02245 PF12833 Helix-turn-helix domain LCC91_02245 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LCC91_02245 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LCC91_02250 PF00929 Exonuclease LCC91_02250 PF08411 Exonuclease C-terminal LCC91_02255 PF00563 EAL domain LCC91_02255 PF00990 Diguanylate cyclase, GGDEF domain LCC91_02255 PF03707 Bacterial signalling protein N terminal repeat LCC91_02260 PF05872 Bacterial protein of unknown function (DUF853) LCC91_02265 PF01709 Transcriptional regulator LCC91_02270 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LCC91_02270 PF02843 Phosphoribosylglycinamide synthetase, C domain LCC91_02270 PF02844 Phosphoribosylglycinamide synthetase, N domain LCC91_02275 PF01218 Coproporphyrinogen III oxidase LCC91_02280 PF01467 Cytidylyltransferase-like LCC91_02290 PF02590 Predicted SPOUT methyltransferase LCC91_02295 PF02545 Maf-like protein LCC91_02300 PF10150 Ribonuclease E/G family LCC91_02300 PF00575 S1 RNA binding domain LCC91_02305 PF00664 ABC transporter transmembrane region LCC91_02305 PF00005 ABC transporter LCC91_02310 PF04052 TolB amino-terminal domain LCC91_02310 PF07676 WD40-like Beta Propeller Repeat LCC91_02315 PF00691 OmpA family LCC91_02325 PF04143 Sulphur transport LCC91_02330 PF00899 ThiF family LCC91_02345 PF01177 Asp/Glu/Hydantoin racemase LCC91_02355 PF01165 Ribosomal protein S21 LCC91_02360 PF03976 Polyphosphate kinase 2 (PPK2) LCC91_02370 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LCC91_02370 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LCC91_02375 PF00202 Aminotransferase class-III LCC91_02385 PF01649 Ribosomal protein S20 LCC91_02395 PF00271 Helicase conserved C-terminal domain LCC91_02395 PF00270 DEAD/DEAH box helicase LCC91_02400 PF00149 Calcineurin-like phosphoesterase LCC91_02405 PF01595 Cyclin M transmembrane N-terminal domain LCC91_02405 PF03471 Transporter associated domain LCC91_02405 PF00571 CBS domain LCC91_02410 PF03466 LysR substrate binding domain LCC91_02410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCC91_02415 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain LCC91_02415 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain LCC91_02420 PF00101 Ribulose bisphosphate carboxylase, small chain LCC91_02445 PF00936 BMC domain LCC91_02450 PF00936 BMC domain LCC91_02455 PF00210 Ferritin-like domain LCC91_02465 PF13614 AAA domain LCC91_02475 PF08406 CbbQ/NirQ/NorQ C-terminal LCC91_02475 PF07728 AAA domain (dynein-related subfamily) LCC91_02480 PF00092 von Willebrand factor type A domain LCC91_02510 PF00580 UvrD/REP helicase N-terminal domain LCC91_02510 PF13361 UvrD-like helicase C-terminal domain LCC91_02515 PF04244 Deoxyribodipyrimidine photo-lyase-related protein LCC91_02520 PF00875 DNA photolyase LCC91_02520 PF03441 FAD binding domain of DNA photolyase LCC91_02530 PF03441 FAD binding domain of DNA photolyase LCC91_02530 PF00875 DNA photolyase LCC91_02540 PF00106 short chain dehydrogenase LCC91_02575 PF01593 Flavin containing amine oxidoreductase LCC91_02595 PF00892 EamA-like transporter family LCC91_02600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCC91_02600 PF03466 LysR substrate binding domain LCC91_02605 PF13419 Haloacid dehalogenase-like hydrolase LCC91_02610 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LCC91_02615 PF00485 Phosphoribulokinase / Uridine kinase family LCC91_02620 PF02779 Transketolase, pyrimidine binding domain LCC91_02620 PF02780 Transketolase, C-terminal domain LCC91_02620 PF00456 Transketolase, thiamine diphosphate binding domain LCC91_02625 PF13419 Haloacid dehalogenase-like hydrolase LCC91_02630 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LCC91_02630 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LCC91_02635 PF00162 Phosphoglycerate kinase LCC91_02640 PF01116 Fructose-bisphosphate aldolase class-II LCC91_02645 PF00027 Cyclic nucleotide-binding domain LCC91_02645 PF13545 Crp-like helix-turn-helix domain LCC91_02650 PF18073 Rubredoxin metal binding domain LCC91_02660 PF00216 Bacterial DNA-binding protein LCC91_02665 PF00575 S1 RNA binding domain LCC91_02670 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LCC91_02675 PF02153 Prephenate dehydrogenase LCC91_02680 PF01842 ACT domain LCC91_02680 PF01817 Chorismate mutase type II LCC91_02680 PF00800 Prephenate dehydratase LCC91_02685 PF00266 Aminotransferase class-V LCC91_02690 PF03989 DNA gyrase C-terminal domain, beta-propeller LCC91_02690 PF00521 DNA gyrase/topoisomerase IV, subunit A LCC91_02695 PF00691 OmpA family LCC91_02705 PF13419 Haloacid dehalogenase-like hydrolase LCC91_02725 PF01169 Uncharacterized protein family UPF0016 LCC91_02735 PF00753 Metallo-beta-lactamase superfamily LCC91_02740 PF00528 Binding-protein-dependent transport system inner membrane component LCC91_02745 PF00005 ABC transporter LCC91_02750 PF12849 PBP superfamily domain LCC91_02760 PF13247 4Fe-4S dicluster domain LCC91_02765 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 LCC91_02765 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain LCC91_02770 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCC91_02790 PF04381 Putative exonuclease, RdgC LCC91_02800 PF00171 Aldehyde dehydrogenase family LCC91_02805 PF00491 Arginase family LCC91_02815 PF00528 Binding-protein-dependent transport system inner membrane component LCC91_02820 PF00528 Binding-protein-dependent transport system inner membrane component LCC91_02830 PF00005 ABC transporter LCC91_02830 PF08402 TOBE domain LCC91_02835 PF02515 CoA-transferase family III LCC91_02840 PF02770 Acyl-CoA dehydrogenase, middle domain LCC91_02840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LCC91_02840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LCC91_02845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCC91_02845 PF03466 LysR substrate binding domain LCC91_02855 PF00202 Aminotransferase class-III LCC91_02860 PF00155 Aminotransferase class I and II LCC91_02865 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LCC91_02865 PF10996 Beta-Casp domain LCC91_02865 PF00753 Metallo-beta-lactamase superfamily LCC91_02870 PF00226 DnaJ domain LCC91_02870 PF01556 DnaJ C terminal domain LCC91_02870 PF00684 DnaJ central domain LCC91_02875 PF00012 Hsp70 protein LCC91_02880 PF01025 GrpE LCC91_02885 PF01557 Fumarylacetoacetate (FAA) hydrolase family LCC91_02895 PF00117 Glutamine amidotransferase class-I LCC91_02925 PF01494 FAD binding domain LCC91_02940 PF00989 PAS fold LCC91_02940 PF00512 His Kinase A (phospho-acceptor) domain LCC91_02940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCC91_02950 PF03707 Bacterial signalling protein N terminal repeat LCC91_02950 PF00990 Diguanylate cyclase, GGDEF domain LCC91_02950 PF00563 EAL domain LCC91_02955 PF04545 Sigma-70, region 4 LCC91_02955 PF04539 Sigma-70 region 3 LCC91_02955 PF04542 Sigma-70 region 2 LCC91_02955 PF03979 Sigma-70 factor, region 1.1 LCC91_02955 PF04546 Sigma-70, non-essential region LCC91_02955 PF00140 Sigma-70 factor, region 1.2 LCC91_02965 PF13188 PAS domain LCC91_02965 PF00563 EAL domain LCC91_02965 PF00990 Diguanylate cyclase, GGDEF domain LCC91_02965 PF03707 Bacterial signalling protein N terminal repeat LCC91_02975 PF05598 Transposase domain (DUF772) LCC91_02985 PF00990 Diguanylate cyclase, GGDEF domain LCC91_02990 PF00106 short chain dehydrogenase LCC91_02995 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) LCC91_03000 PF01270 Glycosyl hydrolases family 8 LCC91_03010 PF03552 Cellulose synthase LCC91_03010 PF00535 Glycosyl transferase family 2 LCC91_03010 PF07238 PilZ domain LCC91_03015 PF05598 Transposase domain (DUF772) LCC91_03030 PF03552 Cellulose synthase LCC91_03030 PF00535 Glycosyl transferase family 2 LCC91_03030 PF07238 PilZ domain LCC91_03045 PF01734 Patatin-like phospholipase LCC91_03050 PF09361 Phasin protein LCC91_03055 PF00850 Histone deacetylase domain LCC91_03065 PF00881 Nitroreductase family LCC91_03075 PF17886 HSP20-like domain found in ArsA LCC91_03075 PF02374 Anion-transporting ATPase LCC91_03085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LCC91_03085 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LCC91_03090 PF13244 Domain of unknown function (DUF4040) LCC91_03090 PF00361 Proton-conducting membrane transporter LCC91_03090 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LCC91_03095 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LCC91_03100 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LCC91_03105 PF00361 Proton-conducting membrane transporter LCC91_03115 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LCC91_03120 PF03334 Na+/H+ antiporter subunit LCC91_03125 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LCC91_03125 PF00361 Proton-conducting membrane transporter LCC91_03125 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LCC91_03125 PF13244 Domain of unknown function (DUF4040) LCC91_03130 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LCC91_03135 PF00361 Proton-conducting membrane transporter LCC91_03145 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LCC91_03150 PF03334 Na+/H+ antiporter subunit LCC91_03155 PF03641 Possible lysine decarboxylase LCC91_03160 PF09285 Elongation factor P, C-terminal LCC91_03160 PF08207 Elongation factor P (EF-P) KOW-like domain LCC91_03160 PF01132 Elongation factor P (EF-P) OB domain LCC91_03180 PF01541 GIY-YIG catalytic domain LCC91_03180 PF08459 UvrC Helix-hairpin-helix N-terminal LCC91_03185 PF01066 CDP-alcohol phosphatidyltransferase LCC91_03190 PF00892 EamA-like transporter family LCC91_03195 PF00180 Isocitrate/isopropylmalate dehydrogenase LCC91_03200 PF00216 Bacterial DNA-binding protein LCC91_03210 PF00467 KOW motif LCC91_03210 PF02357 Transcription termination factor nusG LCC91_03215 PF08011 PD-(D/E)XK nuclease superfamily LCC91_03215 PF09820 Predicted AAA-ATPase LCC91_03220 PF16363 GDP-mannose 4,6 dehydratase LCC91_03245 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LCC91_03245 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LCC91_03245 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LCC91_03250 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LCC91_03250 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LCC91_03255 PF00132 Bacterial transferase hexapeptide (six repeats) LCC91_03260 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LCC91_03265 PF02350 UDP-N-acetylglucosamine 2-epimerase LCC91_03270 PF16363 GDP-mannose 4,6 dehydratase LCC91_03275 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LCC91_03290 PF00733 Asparagine synthase LCC91_03290 PF13537 Glutamine amidotransferase domain LCC91_03295 PF01370 NAD dependent epimerase/dehydratase family LCC91_03295 PF02911 Formyl transferase, C-terminal domain LCC91_03295 PF00551 Formyl transferase LCC91_03305 PF01609 Transposase DDE domain LCC91_03305 PF05598 Transposase domain (DUF772) LCC91_03320 PF01554 MatE LCC91_03335 PF00733 Asparagine synthase LCC91_03335 PF13537 Glutamine amidotransferase domain LCC91_03340 PF05598 Transposase domain (DUF772) LCC91_03350 PF05598 Transposase domain (DUF772) LCC91_03375 PF00534 Glycosyl transferases group 1 LCC91_03375 PF13439 Glycosyltransferase Family 4 LCC91_03380 PF13537 Glutamine amidotransferase domain LCC91_03380 PF00733 Asparagine synthase LCC91_03390 PF00953 Glycosyl transferase family 4 LCC91_03420 PF08240 Alcohol dehydrogenase GroES-like domain LCC91_03420 PF08659 KR domain LCC91_03420 PF16197 Ketoacyl-synthetase C-terminal extension LCC91_03420 PF02801 Beta-ketoacyl synthase, C-terminal domain LCC91_03420 PF00109 Beta-ketoacyl synthase, N-terminal domain LCC91_03420 PF00107 Zinc-binding dehydrogenase LCC91_03420 PF00698 Acyl transferase domain LCC91_03420 PF14765 Polyketide synthase dehydratase LCC91_03420 PF00550 Phosphopantetheine attachment site LCC91_03430 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system LCC91_03455 PF01476 LysM domain LCC91_03455 PF01551 Peptidase family M23 LCC91_03460 PF05958 tRNA (Uracil-5-)-methyltransferase LCC91_03470 PF01027 Inhibitor of apoptosis-promoting Bax1 LCC91_03475 PF02472 Biopolymer transport protein ExbD/TolR LCC91_03480 PF01618 MotA/TolQ/ExbB proton channel family LCC91_03490 PF01070 FMN-dependent dehydrogenase LCC91_03495 PF18331 PKHD-type hydroxylase C-terminal domain LCC91_03495 PF13640 2OG-Fe(II) oxygenase superfamily LCC91_03500 PF07715 TonB-dependent Receptor Plug Domain LCC91_03500 PF00593 TonB dependent receptor LCC91_03505 PF10417 C-terminal domain of 1-Cys peroxiredoxin LCC91_03505 PF00578 AhpC/TSA family LCC91_03510 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCC91_03510 PF13192 Thioredoxin domain LCC91_03515 PF07715 TonB-dependent Receptor Plug Domain LCC91_03515 PF00593 TonB dependent receptor LCC91_03520 PF05171 Haemin-degrading HemS.ChuX domain LCC91_03525 PF01497 Periplasmic binding protein LCC91_03530 PF01032 FecCD transport family LCC91_03535 PF00005 ABC transporter LCC91_03540 PF06804 NlpB/DapX lipoprotein LCC91_03545 PF00701 Dihydrodipicolinate synthetase family LCC91_03565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCC91_03565 PF00986 DNA gyrase B subunit, carboxyl terminus LCC91_03565 PF00204 DNA gyrase B LCC91_03565 PF01751 Toprim domain LCC91_03575 PF00072 Response regulator receiver domain LCC91_03575 PF00486 Transcriptional regulatory protein, C terminal LCC91_03580 PF08521 Two-component sensor kinase N-terminal LCC91_03580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCC91_03580 PF00512 His Kinase A (phospho-acceptor) domain LCC91_03585 PF08019 Phosphoethanolamine transferase EptA/EptB LCC91_03585 PF00884 Sulfatase LCC91_03590 PF01219 Prokaryotic diacylglycerol kinase LCC91_03595 PF04345 Chorismate lyase LCC91_03600 PF00521 DNA gyrase/topoisomerase IV, subunit A LCC91_03615 PF00753 Metallo-beta-lactamase superfamily LCC91_03615 PF03772 Competence protein LCC91_03620 PF00990 Diguanylate cyclase, GGDEF domain LCC91_03620 PF13188 PAS domain LCC91_03620 PF00563 EAL domain LCC91_03620 PF03707 Bacterial signalling protein N terminal repeat LCC91_03625 PF14403 Circularly permuted ATP-grasp type 2 LCC91_03645 PF16868 NMT1-like family LCC91_03650 PF13559 Domain of unknown function (DUF4129) LCC91_03650 PF11992 Domain of unknown function (DUF3488) LCC91_03650 PF01841 Transglutaminase-like superfamily LCC91_03660 PF17863 AAA lid domain LCC91_03660 PF07726 ATPase family associated with various cellular activities (AAA) LCC91_03665 PF00850 Histone deacetylase domain LCC91_03670 PF00378 Enoyl-CoA hydratase/isomerase LCC91_03675 PF00924 Mechanosensitive ion channel LCC91_03675 PF12795 Mechanosensitive ion channel porin domain LCC91_03675 PF12794 Mechanosensitive ion channel inner membrane domain 1 LCC91_03680 PF01012 Electron transfer flavoprotein domain LCC91_03685 PF01012 Electron transfer flavoprotein domain LCC91_03685 PF00766 Electron transfer flavoprotein FAD-binding domain LCC91_03690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LCC91_03690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LCC91_03690 PF02770 Acyl-CoA dehydrogenase, middle domain LCC91_03690 PF12806 Acetyl-CoA dehydrogenase C-terminal like LCC91_03700 PF00271 Helicase conserved C-terminal domain LCC91_03700 PF00176 SNF2 family N-terminal domain LCC91_03715 PF02463 RecF/RecN/SMC N terminal domain LCC91_03730 PF00270 DEAD/DEAH box helicase LCC91_03730 PF13749 Putative ATP-dependent DNA helicase recG C-terminal LCC91_03730 PF17191 RecG wedge domain LCC91_03745 PF07690 Major Facilitator Superfamily LCC91_03750 PF08676 MutL C terminal dimerisation domain LCC91_03750 PF01119 DNA mismatch repair protein, C-terminal domain LCC91_03755 PF01520 N-acetylmuramoyl-L-alanine amidase LCC91_03755 PF11741 AMIN domain LCC91_03760 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LCC91_03765 PF08331 Domain of unknown function (DUF1730) LCC91_03785 PF01936 NYN domain LCC91_03795 PF00075 RNase H LCC91_03800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LCC91_03805 PF00873 AcrB/AcrD/AcrF family LCC91_03820 PF02562 PhoH-like protein LCC91_03820 PF13638 PIN domain LCC91_03825 PF00578 AhpC/TSA family LCC91_03830 PF04430 Protein of unknown function (DUF498/DUF598) LCC91_03835 PF00155 Aminotransferase class I and II LCC91_03840 PF00742 Homoserine dehydrogenase LCC91_03840 PF03447 Homoserine dehydrogenase, NAD binding domain LCC91_03840 PF01842 ACT domain LCC91_03845 PF00291 Pyridoxal-phosphate dependent enzyme LCC91_03845 PF14821 Threonine synthase N terminus LCC91_03850 PF00994 Probable molybdopterin binding domain LCC91_03850 PF03454 MoeA C-terminal region (domain IV) LCC91_03850 PF03453 MoeA N-terminal region (domain I and II) LCC91_03855 PF00563 EAL domain LCC91_03855 PF03707 Bacterial signalling protein N terminal repeat LCC91_03855 PF00990 Diguanylate cyclase, GGDEF domain LCC91_03860 PF02597 ThiS family LCC91_03865 PF02391 MoaE protein LCC91_03870 PF00004 ATPase family associated with various cellular activities (AAA) LCC91_03870 PF07724 AAA domain (Cdc48 subfamily) LCC91_03870 PF17871 AAA lid domain LCC91_03870 PF02861 Clp amino terminal domain, pathogenicity island component LCC91_03870 PF10431 C-terminal, D2-small domain, of ClpB protein LCC91_03875 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LCC91_03875 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LCC91_03880 PF00535 Glycosyl transferase family 2 LCC91_03900 PF04279 Intracellular septation protein A LCC91_03905 PF01641 SelR domain LCC91_03910 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LCC91_03920 PF05598 Transposase domain (DUF772) LCC91_03930 PF13276 HTH-like domain LCC91_03930 PF00665 Integrase core domain LCC91_03930 PF13333 Integrase core domain LCC91_03940 PF05598 Transposase domain (DUF772) LCC91_03950 PF05598 Transposase domain (DUF772) LCC91_03955 PF05598 Transposase domain (DUF772) LCC91_03960 PF00743 Flavin-binding monooxygenase-like LCC91_03965 PF12697 Alpha/beta hydrolase family LCC91_03975 PF05721 Phytanoyl-CoA dioxygenase (PhyH) LCC91_03980 PF05598 Transposase domain (DUF772) LCC91_03995 PF00501 AMP-binding enzyme LCC91_03995 PF13193 AMP-binding enzyme C-terminal domain LCC91_04005 PF02653 Branched-chain amino acid transport system / permease component LCC91_04015 PF00005 ABC transporter LCC91_04015 PF12399 Branched-chain amino acid ATP-binding cassette transporter LCC91_04020 PF00005 ABC transporter LCC91_04025 PF00571 CBS domain LCC91_04030 PF00474 Sodium:solute symporter family LCC91_04035 PF01250 Ribosomal protein S6 LCC91_04045 PF01084 Ribosomal protein S18 LCC91_04050 PF03948 Ribosomal protein L9, C-terminal domain LCC91_04050 PF01281 Ribosomal protein L9, N-terminal domain LCC91_04055 PF13525 Outer membrane lipoprotein LCC91_04060 PF01479 S4 domain LCC91_04060 PF00849 RNA pseudouridylate synthase LCC91_04065 PF04079 Segregation and condensation complex subunit ScpB LCC91_04075 PF00334 Nucleoside diphosphate kinase LCC91_04080 PF04055 Radical SAM superfamily LCC91_04095 PF04551 GcpE protein LCC91_04100 PF03129 Anticodon binding domain LCC91_04100 PF13393 Histidyl-tRNA synthetase LCC91_04105 PF09976 Tetratricopeptide repeat-like domain LCC91_04110 PF13360 PQQ-like domain LCC91_04115 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LCC91_04115 PF01926 50S ribosome-binding GTPase LCC91_04120 PF17209 Hfq protein LCC91_04125 PF01926 50S ribosome-binding GTPase LCC91_04125 PF13167 GTP-binding GTPase N-terminal LCC91_04125 PF16360 GTP-binding GTPase Middle Region LCC91_04130 PF01145 SPFH domain / Band 7 family LCC91_04130 PF12221 Bacterial membrane protein N terminal LCC91_04135 PF01145 SPFH domain / Band 7 family LCC91_04140 PF13393 Histidyl-tRNA synthetase LCC91_04145 PF00709 Adenylosuccinate synthetase LCC91_04155 PF01053 Cys/Met metabolism PLP-dependent enzyme LCC91_04160 PF00491 Arginase family LCC91_04165 PF01979 Amidohydrolase family LCC91_04170 PF00221 Aromatic amino acid lyase LCC91_04175 PF17391 Urocanase N-terminal domain LCC91_04175 PF17392 Urocanase C-terminal domain LCC91_04175 PF01175 Urocanase Rossmann-like domain LCC91_04180 PF07670 Nucleoside recognition LCC91_04185 PF07702 UTRA domain LCC91_04185 PF00392 Bacterial regulatory proteins, gntR family LCC91_04190 PF13472 GDSL-like Lipase/Acylhydrolase family LCC91_04195 PF00005 ABC transporter LCC91_04200 PF00588 SpoU rRNA Methylase family LCC91_04200 PF08032 RNA 2'-O ribose methyltransferase substrate binding LCC91_04215 PF05233 PHB accumulation regulatory domain LCC91_04215 PF07879 PHB/PHA accumulation regulator DNA-binding domain LCC91_04220 PF04055 Radical SAM superfamily LCC91_04220 PF18693 TRAM domain LCC91_04220 PF00919 Uncharacterized protein family UPF0004 LCC91_04235 PF17876 Cold shock domain LCC91_04235 PF08461 Ribonuclease R winged-helix domain LCC91_04235 PF08206 Ribonuclease B OB domain LCC91_04235 PF00773 RNB domain LCC91_04235 PF00575 S1 RNA binding domain LCC91_04240 PF02325 YGGT family LCC91_04245 PF00994 Probable molybdopterin binding domain LCC91_04245 PF03454 MoeA C-terminal region (domain IV) LCC91_04245 PF03453 MoeA N-terminal region (domain I and II) LCC91_04250 PF12804 MobA-like NTP transferase domain LCC91_04255 PF06463 Molybdenum Cofactor Synthesis C LCC91_04255 PF04055 Radical SAM superfamily LCC91_04265 PF00719 Inorganic pyrophosphatase LCC91_04275 PF02540 NAD synthase LCC91_04275 PF00795 Carbon-nitrogen hydrolase LCC91_04280 PF00543 Nitrogen regulatory protein P-II LCC91_04285 PF03641 Possible lysine decarboxylase LCC91_04295 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LCC91_04295 PF00205 Thiamine pyrophosphate enzyme, central domain LCC91_04295 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LCC91_04300 PF10369 Small subunit of acetolactate synthase LCC91_04305 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LCC91_04305 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LCC91_04310 PF01066 CDP-alcohol phosphatidyltransferase LCC91_04315 PF00682 HMGL-like LCC91_04315 PF08502 LeuA allosteric (dimerisation) domain LCC91_04320 PF00768 D-alanyl-D-alanine carboxypeptidase LCC91_04325 PF09339 IclR helix-turn-helix domain LCC91_04325 PF01614 Bacterial transcriptional regulator LCC91_04330 PF04377 Arginine-tRNA-protein transferase, C terminus LCC91_04330 PF04376 Arginine-tRNA-protein transferase, N terminus LCC91_04335 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LCC91_04340 PF00730 HhH-GPD superfamily base excision DNA repair protein LCC91_04340 PF10576 Iron-sulfur binding domain of endonuclease III LCC91_04340 PF00633 Helix-hairpin-helix motif LCC91_04345 PF00155 Aminotransferase class I and II LCC91_04405 PF00291 Pyridoxal-phosphate dependent enzyme LCC91_04415 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LCC91_04415 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LCC91_04420 PF03461 TRCF domain LCC91_04420 PF02559 CarD-like/TRCF domain LCC91_04420 PF17757 UvrB interaction domain LCC91_04420 PF00271 Helicase conserved C-terminal domain LCC91_04420 PF00270 DEAD/DEAH box helicase LCC91_04425 PF12697 Alpha/beta hydrolase family LCC91_04435 PF05598 Transposase domain (DUF772) LCC91_04440 PF00990 Diguanylate cyclase, GGDEF domain LCC91_04440 PF00072 Response regulator receiver domain LCC91_04445 PF02542 YgbB family LCC91_04445 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LCC91_04450 PF00672 HAMP domain LCC91_04450 PF00512 His Kinase A (phospho-acceptor) domain LCC91_04450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCC91_04455 PF00486 Transcriptional regulatory protein, C terminal LCC91_04455 PF00072 Response regulator receiver domain LCC91_04465 PF00106 short chain dehydrogenase LCC91_04475 PF04607 Region found in RelA / SpoT proteins LCC91_04475 PF02824 TGS domain LCC91_04475 PF13291 ACT domain LCC91_04485 PF00772 DnaB-like helicase N terminal domain LCC91_04485 PF14528 LAGLIDADG-like domain LCC91_04485 PF03796 DnaB-like helicase C terminal domain LCC91_04495 PF07687 Peptidase dimerisation domain LCC91_04495 PF01546 Peptidase family M20/M25/M40 LCC91_04500 PF01546 Peptidase family M20/M25/M40 LCC91_04500 PF07687 Peptidase dimerisation domain LCC91_04510 PF00392 Bacterial regulatory proteins, gntR family LCC91_04510 PF07729 FCD domain LCC91_04515 PF00576 HIUase/Transthyretin family LCC91_04525 PF02492 CobW/HypB/UreG, nucleotide-binding domain LCC91_04530 PF01730 UreF LCC91_04535 PF05194 UreE urease accessory protein, C-terminal domain LCC91_04535 PF02814 UreE urease accessory protein, N-terminal domain LCC91_04540 PF01979 Amidohydrolase family LCC91_04540 PF00449 Urease alpha-subunit, N-terminal domain LCC91_04545 PF00699 Urease beta subunit LCC91_04550 PF04955 HupE / UreJ protein LCC91_04555 PF00547 Urease, gamma subunit LCC91_04560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCC91_04560 PF00072 Response regulator receiver domain LCC91_04560 PF01627 Hpt domain LCC91_04560 PF00512 His Kinase A (phospho-acceptor) domain LCC91_04565 PF00072 Response regulator receiver domain LCC91_04575 PF02653 Branched-chain amino acid transport system / permease component LCC91_04580 PF02653 Branched-chain amino acid transport system / permease component LCC91_04585 PF00005 ABC transporter LCC91_04585 PF12399 Branched-chain amino acid ATP-binding cassette transporter LCC91_04590 PF00005 ABC transporter LCC91_04595 PF01774 UreD urease accessory protein LCC91_04600 PF00528 Binding-protein-dependent transport system inner membrane component LCC91_04605 PF00005 ABC transporter LCC91_04615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCC91_04615 PF03466 LysR substrate binding domain LCC91_04620 PF01799 [2Fe-2S] binding domain LCC91_04620 PF00111 2Fe-2S iron-sulfur cluster binding domain LCC91_04620 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LCC91_04620 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LCC91_04625 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LCC91_04625 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LCC91_04650 PF05598 Transposase domain (DUF772) LCC91_04665 PF05598 Transposase domain (DUF772) LCC91_04670 PF05384 Sensor protein DegS LCC91_04670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCC91_04670 PF07730 Histidine kinase LCC91_04675 PF00072 Response regulator receiver domain LCC91_04675 PF00196 Bacterial regulatory proteins, luxR family LCC91_04690 PF07690 Major Facilitator Superfamily LCC91_04695 PF07690 Major Facilitator Superfamily LCC91_04700 PF00384 Molybdopterin oxidoreductase LCC91_04700 PF14710 Respiratory nitrate reductase alpha N-terminal LCC91_04700 PF01568 Molydopterin dinucleotide binding domain LCC91_04705 PF14711 Respiratory nitrate reductase beta C-terminal LCC91_04705 PF13247 4Fe-4S dicluster domain LCC91_04710 PF02613 Nitrate reductase delta subunit LCC91_04715 PF02665 Nitrate reductase gamma subunit LCC91_04725 PF13187 4Fe-4S dicluster domain LCC91_04725 PF01645 Conserved region in glutamate synthase LCC91_04745 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LCC91_04750 PF02441 Flavoprotein LCC91_04755 PF08859 DGC domain LCC91_04760 PF02036 SCP-2 sterol transfer family LCC91_04765 PF01136 Peptidase family U32 LCC91_04770 PF01136 Peptidase family U32 LCC91_04775 PF01814 Hemerythrin HHE cation binding domain LCC91_04775 PF04405 Domain of Unknown function (DUF542) LCC91_04780 PF02082 Transcriptional regulator LCC91_04790 PF13746 4Fe-4S dicluster domain LCC91_04790 PF12801 4Fe-4S binding domain LCC91_04790 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase LCC91_04795 PF03477 ATP cone domain LCC91_04795 PF00317 Ribonucleotide reductase, all-alpha domain LCC91_04795 PF02867 Ribonucleotide reductase, barrel domain LCC91_04805 PF00589 Phage integrase family LCC91_04815 PF02581 Thiamine monophosphate synthase LCC91_04820 PF05690 Thiazole biosynthesis protein ThiG LCC91_04830 PF01266 FAD dependent oxidoreductase LCC91_04835 PF08543 Phosphomethylpyrimidine kinase LCC91_04835 PF02581 Thiamine monophosphate synthase LCC91_04840 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCC91_04845 PF00037 4Fe-4S binding domain LCC91_04845 PF11953 Domain of unknown function (DUF3470) LCC91_04850 PF05598 Transposase domain (DUF772) LCC91_04860 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LCC91_04860 PF01266 FAD dependent oxidoreductase LCC91_04865 PF04362 Bacterial Fe(2+) trafficking LCC91_04870 PF00970 Oxidoreductase FAD-binding domain LCC91_04870 PF00175 Oxidoreductase NAD-binding domain LCC91_04875 PF02600 Disulfide bond formation protein DsbB LCC91_04880 PF01266 FAD dependent oxidoreductase LCC91_04890 PF01180 Dihydroorotate dehydrogenase LCC91_04895 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LCC91_04900 PF01432 Peptidase family M3 LCC91_04905 PF01985 CRS1 / YhbY (CRM) domain LCC91_04910 PF01728 FtsJ-like methyltransferase LCC91_04915 PF00004 ATPase family associated with various cellular activities (AAA) LCC91_04915 PF17862 AAA+ lid domain LCC91_04915 PF06480 FtsH Extracellular LCC91_04915 PF01434 Peptidase family M41 LCC91_04920 PF00809 Pterin binding enzyme LCC91_04925 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LCC91_04925 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LCC91_04925 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LCC91_04925 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LCC91_04940 PF13089 Polyphosphate kinase N-terminal domain LCC91_04940 PF17941 Polyphosphate kinase C-terminal domain 1 LCC91_04940 PF13090 Polyphosphate kinase C-terminal domain 2 LCC91_04940 PF02503 Polyphosphate kinase middle domain LCC91_04950 PF02541 Ppx/GppA phosphatase family LCC91_04955 PF00005 ABC transporter LCC91_04960 PF00528 Binding-protein-dependent transport system inner membrane component LCC91_04965 PF00528 Binding-protein-dependent transport system inner membrane component LCC91_04970 PF12849 PBP superfamily domain LCC91_04975 PF01895 PhoU domain LCC91_04980 PF00486 Transcriptional regulatory protein, C terminal LCC91_04980 PF00072 Response regulator receiver domain LCC91_04985 PF11808 Phosphate regulon sensor protein PhoR LCC91_04985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCC91_04985 PF00512 His Kinase A (phospho-acceptor) domain LCC91_04985 PF00989 PAS fold LCC91_04995 PF01197 Ribosomal protein L31 LCC91_05000 PF07497 Rho termination factor, RNA-binding domain LCC91_05000 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LCC91_05000 PF07498 Rho termination factor, N-terminal domain LCC91_05005 PF00085 Thioredoxin LCC91_05015 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LCC91_05015 PF12170 DNA polymerase III tau subunit V interacting with alpha LCC91_05015 PF12169 DNA polymerase III subunits gamma and tau domain III LCC91_05020 PF02575 YbaB/EbfC DNA-binding family LCC91_05025 PF13662 Toprim domain LCC91_05025 PF02132 RecR protein LCC91_05035 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LCC91_05035 PF12826 Helix-hairpin-helix motif LCC91_05035 PF03120 NAD-dependent DNA ligase OB-fold domain LCC91_05035 PF01653 NAD-dependent DNA ligase adenylation domain LCC91_05035 PF00533 BRCA1 C Terminus (BRCT) domain LCC91_05045 PF08335 GlnD PII-uridylyltransferase LCC91_05045 PF01966 HD domain LCC91_05045 PF01909 Nucleotidyltransferase domain LCC91_05050 PF00557 Metallopeptidase family M24 LCC91_05075 PF02576 RimP N-terminal domain LCC91_05080 PF08529 NusA N-terminal domain LCC91_05080 PF00575 S1 RNA binding domain LCC91_05080 PF13184 NusA-like KH domain LCC91_05085 PF08364 Bacterial translation initiation factor IF-2 associated region LCC91_05085 PF11987 Translation-initiation factor 2 LCC91_05085 PF00009 Elongation factor Tu GTP binding domain LCC91_05085 PF04760 Translation initiation factor IF-2, N-terminal region LCC91_05090 PF02033 Ribosome-binding factor A LCC91_05095 PF16198 tRNA pseudouridylate synthase B C-terminal domain LCC91_05095 PF01509 TruB family pseudouridylate synthase (N terminal domain) LCC91_05100 PF00679 Elongation factor G C-terminus LCC91_05100 PF00009 Elongation factor Tu GTP binding domain LCC91_05100 PF03144 Elongation factor Tu domain 2 LCC91_05110 PF00378 Enoyl-CoA hydratase/isomerase LCC91_05115 PF01668 SmpB protein LCC91_05120 PF03364 Polyketide cyclase / dehydrase and lipid transport LCC91_05125 PF03658 RnfH family Ubiquitin LCC91_05130 PF00478 IMP dehydrogenase / GMP reductase domain LCC91_05130 PF00571 CBS domain LCC91_05145 PF00117 Glutamine amidotransferase class-I LCC91_05145 PF00958 GMP synthase C terminal domain LCC91_05145 PF02540 NAD synthase LCC91_05165 PF14437 MafB19-like deaminase LCC91_05170 PF02016 LD-carboxypeptidase N-terminal domain LCC91_05170 PF17676 LD-carboxypeptidase C-terminal domain LCC91_05175 PF02875 Mur ligase family, glutamate ligase domain LCC91_05175 PF08245 Mur ligase middle domain LCC91_05175 PF08443 RimK-like ATP-grasp domain LCC91_05180 PF08443 RimK-like ATP-grasp domain LCC91_05180 PF08245 Mur ligase middle domain LCC91_05180 PF02875 Mur ligase family, glutamate ligase domain LCC91_05185 PF00664 ABC transporter transmembrane region LCC91_05185 PF00005 ABC transporter LCC91_05195 PF00005 ABC transporter LCC91_05205 PF00528 Binding-protein-dependent transport system inner membrane component LCC91_05210 PF00528 Binding-protein-dependent transport system inner membrane component LCC91_05215 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCC91_05220 PF01970 Tripartite tricarboxylate transporter TctA family LCC91_05235 PF01026 TatD related DNase LCC91_05245 PF09115 DNA polymerase III, delta subunit, C terminal LCC91_05250 PF02223 Thymidylate kinase LCC91_05260 PF02618 YceG-like family LCC91_05265 PF01571 Aminomethyltransferase folate-binding domain LCC91_05275 PF13673 Acetyltransferase (GNAT) domain LCC91_05280 PF01136 Peptidase family U32 LCC91_05280 PF12392 Collagenase LCC91_05290 PF02769 AIR synthase related protein, C-terminal domain LCC91_05290 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LCC91_05290 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LCC91_05320 PF00877 NlpC/P60 family LCC91_05325 PF04325 Protein of unknown function (DUF465) LCC91_05330 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LCC91_05330 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LCC91_05330 PF01276 Orn/Lys/Arg decarboxylase, major domain LCC91_05340 PF01145 SPFH domain / Band 7 family LCC91_05385 PF00589 Phage integrase family LCC91_05385 PF13356 Arm DNA-binding domain LCC91_05390 PF03707 Bacterial signalling protein N terminal repeat LCC91_05390 PF00990 Diguanylate cyclase, GGDEF domain LCC91_05390 PF00563 EAL domain LCC91_05395 PF03969 AFG1-like ATPase LCC91_05400 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCC91_05400 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LCC91_05405 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LCC91_05405 PF00364 Biotin-requiring enzyme LCC91_05405 PF02817 e3 binding domain LCC91_05410 PF00676 Dehydrogenase E1 component LCC91_05410 PF02779 Transketolase, pyrimidine binding domain LCC91_05410 PF16078 2-oxoglutarate dehydrogenase N-terminus LCC91_05410 PF16870 2-oxoglutarate dehydrogenase C-terminal LCC91_05425 PF16177 Acetyl-coenzyme A synthetase N-terminus LCC91_05425 PF13193 AMP-binding enzyme C-terminal domain LCC91_05425 PF00501 AMP-binding enzyme LCC91_05440 PF00929 Exonuclease LCC91_05445 PF00111 2Fe-2S iron-sulfur cluster binding domain LCC91_05450 PF00012 Hsp70 protein LCC91_05455 PF07743 HSCB C-terminal oligomerisation domain LCC91_05460 PF01521 Iron-sulphur cluster biosynthesis LCC91_05465 PF01592 NifU-like N terminal domain LCC91_05470 PF00266 Aminotransferase class-V LCC91_05475 PF02082 Transcriptional regulator LCC91_05480 PF05231 MASE1 LCC91_05480 PF07730 Histidine kinase LCC91_05480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCC91_05485 PF00072 Response regulator receiver domain LCC91_05485 PF00196 Bacterial regulatory proteins, luxR family LCC91_05490 PF17757 UvrB interaction domain LCC91_05490 PF02151 UvrB/uvrC motif LCC91_05490 PF12344 Ultra-violet resistance protein B LCC91_05490 PF04851 Type III restriction enzyme, res subunit LCC91_05490 PF00271 Helicase conserved C-terminal domain LCC91_05495 PF00155 Aminotransferase class I and II LCC91_05505 PF04060 Putative Fe-S cluster LCC91_05515 PF18140 Propionyl-coenzyme A carboxylase BT domain LCC91_05515 PF02785 Biotin carboxylase C-terminal domain LCC91_05515 PF00289 Biotin carboxylase, N-terminal domain LCC91_05515 PF00364 Biotin-requiring enzyme LCC91_05515 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LCC91_05520 PF01039 Carboxyl transferase domain LCC91_05535 PF02310 B12 binding domain LCC91_05535 PF01642 Methylmalonyl-CoA mutase LCC91_05540 PF07729 FCD domain LCC91_05540 PF00392 Bacterial regulatory proteins, gntR family LCC91_05545 PF01207 Dihydrouridine synthase (Dus) LCC91_05550 PF00106 short chain dehydrogenase LCC91_05555 PF00108 Thiolase, N-terminal domain LCC91_05555 PF02803 Thiolase, C-terminal domain LCC91_05560 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus LCC91_05570 PF02578 Multi-copper polyphenol oxidoreductase laccase LCC91_05575 PF13417 Glutathione S-transferase, N-terminal domain LCC91_05580 PF03099 Biotin/lipoate A/B protein ligase family LCC91_05580 PF00293 NUDIX domain LCC91_05585 PF00563 EAL domain LCC91_05585 PF03707 Bacterial signalling protein N terminal repeat LCC91_05585 PF00990 Diguanylate cyclase, GGDEF domain LCC91_05600 PF06470 SMC proteins Flexible Hinge Domain LCC91_05600 PF02463 RecF/RecN/SMC N terminal domain LCC91_05605 PF00155 Aminotransferase class I and II LCC91_05610 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LCC91_05610 PF14602 Hexapeptide repeat of succinyl-transferase LCC91_05615 PF00437 Type II/IV secretion system protein LCC91_05620 PF07687 Peptidase dimerisation domain LCC91_05620 PF01546 Peptidase family M20/M25/M40 LCC91_05640 PF05175 Methyltransferase small domain LCC91_05645 PF00005 ABC transporter LCC91_05645 PF12848 ABC transporter LCC91_05650 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF LCC91_05650 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF LCC91_05650 PF01189 16S rRNA methyltransferase RsmB/F LCC91_05660 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LCC91_05660 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LCC91_05670 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LCC91_05670 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain LCC91_05670 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LCC91_05675 PF00378 Enoyl-CoA hydratase/isomerase LCC91_05680 PF00027 Cyclic nucleotide-binding domain LCC91_05680 PF13545 Crp-like helix-turn-helix domain LCC91_05690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LCC91_05690 PF02770 Acyl-CoA dehydrogenase, middle domain LCC91_05690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LCC91_05695 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LCC91_05695 PF00437 Type II/IV secretion system protein LCC91_05710 PF00005 ABC transporter LCC91_05710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCC91_05715 PF00528 Binding-protein-dependent transport system inner membrane component LCC91_05715 PF12911 N-terminal TM domain of oligopeptide transport permease C LCC91_05720 PF00528 Binding-protein-dependent transport system inner membrane component LCC91_05725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCC91_05735 PF00034 Cytochrome c LCC91_05740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LCC91_05740 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCC91_05745 PF02817 e3 binding domain LCC91_05745 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LCC91_05745 PF00364 Biotin-requiring enzyme LCC91_05750 PF00456 Transketolase, thiamine diphosphate binding domain LCC91_05750 PF17831 Pyruvate dehydrogenase E1 component middle domain LCC91_05755 PF00512 His Kinase A (phospho-acceptor) domain LCC91_05755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCC91_05755 PF00989 PAS fold LCC91_05760 PF00196 Bacterial regulatory proteins, luxR family LCC91_05760 PF00072 Response regulator receiver domain LCC91_05765 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LCC91_05765 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LCC91_05775 PF03449 Transcription elongation factor, N-terminal LCC91_05775 PF01272 Transcription elongation factor, GreA/GreB, C-term LCC91_05780 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LCC91_05780 PF02142 MGS-like domain LCC91_05780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LCC91_05785 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LCC91_05785 PF00117 Glutamine amidotransferase class-I LCC91_05790 PF08032 RNA 2'-O ribose methyltransferase substrate binding LCC91_05790 PF00588 SpoU rRNA Methylase family LCC91_05795 PF01351 Ribonuclease HII LCC91_05800 PF02684 Lipid-A-disaccharide synthetase LCC91_05805 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LCC91_05805 PF00132 Bacterial transferase hexapeptide (six repeats) LCC91_05810 PF07977 FabA-like domain LCC91_05815 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LCC91_05815 PF00132 Bacterial transferase hexapeptide (six repeats) LCC91_05815 PF14602 Hexapeptide repeat of succinyl-transferase LCC91_05825 PF01103 Surface antigen LCC91_05825 PF07244 Surface antigen variable number repeat LCC91_05830 PF17820 PDZ domain LCC91_05830 PF02163 Peptidase family M50 LCC91_05835 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LCC91_05835 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LCC91_05835 PF13288 DXP reductoisomerase C-terminal domain LCC91_05845 PF01255 Putative undecaprenyl diphosphate synthase LCC91_05850 PF01765 Ribosome recycling factor LCC91_05855 PF00696 Amino acid kinase family LCC91_05860 PF00889 Elongation factor TS LCC91_05865 PF00318 Ribosomal protein S2 LCC91_05870 PF01256 Carbohydrate kinase LCC91_05870 PF03853 YjeF-related protein N-terminus LCC91_05875 PF00565 Staphylococcal nuclease homologue LCC91_05880 PF09339 IclR helix-turn-helix domain LCC91_05880 PF01614 Bacterial transcriptional regulator LCC91_05885 PF01494 FAD binding domain LCC91_05890 PF08497 Radical SAM N-terminal LCC91_05890 PF04055 Radical SAM superfamily LCC91_05890 PF11842 Domain of unknown function (DUF3362) LCC91_05895 PF01575 MaoC like domain LCC91_05895 PF00171 Aldehyde dehydrogenase family LCC91_05900 PF07859 alpha/beta hydrolase fold LCC91_05905 PF00465 Iron-containing alcohol dehydrogenase LCC91_05920 PF08668 HDOD domain LCC91_05925 PF17674 HHH domain LCC91_05925 PF00575 S1 RNA binding domain LCC91_05925 PF09371 Tex-like protein N-terminal domain LCC91_05925 PF16921 Tex protein YqgF-like domain LCC91_05935 PF00106 short chain dehydrogenase LCC91_05940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LCC91_05940 PF02770 Acyl-CoA dehydrogenase, middle domain LCC91_05940 PF18158 Adaptive response protein AidB N-terminal domain LCC91_05945 PF00107 Zinc-binding dehydrogenase LCC91_05945 PF16884 N-terminal domain of oxidoreductase LCC91_05960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LCC91_05960 PF12806 Acetyl-CoA dehydrogenase C-terminal like LCC91_05960 PF02770 Acyl-CoA dehydrogenase, middle domain LCC91_05960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LCC91_05965 PF02803 Thiolase, C-terminal domain LCC91_05965 PF00108 Thiolase, N-terminal domain LCC91_05970 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LCC91_05970 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LCC91_05970 PF00378 Enoyl-CoA hydratase/isomerase LCC91_05980 PF13173 AAA domain LCC91_05980 PF13635 Domain of unknown function (DUF4143) LCC91_05985 PF00929 Exonuclease LCC91_05990 PF00072 Response regulator receiver domain LCC91_05990 PF00486 Transcriptional regulatory protein, C terminal LCC91_05995 PF00512 His Kinase A (phospho-acceptor) domain LCC91_05995 PF18698 Histidine kinase sensor domain LCC91_05995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCC91_05995 PF00989 PAS fold LCC91_05995 PF00672 HAMP domain LCC91_06005 PF00391 PEP-utilising enzyme, mobile domain LCC91_06005 PF02896 PEP-utilising enzyme, TIM barrel domain LCC91_06005 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LCC91_06010 PF03618 Kinase/pyrophosphorylase LCC91_06020 PF00474 Sodium:solute symporter family LCC91_06035 PF02654 Cobalamin-5-phosphate synthase LCC91_06040 PF02277 Phosphoribosyltransferase LCC91_06045 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LCC91_06045 PF07685 CobB/CobQ-like glutamine amidotransferase domain LCC91_06050 PF00155 Aminotransferase class I and II LCC91_06055 PF03186 CobD/Cbib protein LCC91_06065 PF13519 von Willebrand factor type A domain LCC91_06065 PF17863 AAA lid domain LCC91_06065 PF07728 AAA domain (dynein-related subfamily) LCC91_06070 PF02514 CobN/Magnesium Chelatase LCC91_06075 PF02492 CobW/HypB/UreG, nucleotide-binding domain LCC91_06075 PF07683 Cobalamin synthesis protein cobW C-terminal domain LCC91_06080 PF12557 Cob(I)alamin adenosyltransferase N terminal LCC91_06080 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP LCC91_06085 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LCC91_06090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LCC91_06095 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LCC91_06100 PF02571 Precorrin-6x reductase CbiJ/CobK LCC91_06105 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LCC91_06110 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LCC91_06115 PF02570 Precorrin-8X methylmutase LCC91_06130 PF04055 Radical SAM superfamily LCC91_06130 PF06968 Biotin and Thiamin Synthesis associated domain LCC91_06135 PF00005 ABC transporter LCC91_06140 PF01032 FecCD transport family LCC91_06145 PF01497 Periplasmic binding protein LCC91_06150 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase LCC91_06165 PF07685 CobB/CobQ-like glutamine amidotransferase domain LCC91_06165 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LCC91_06195 PF01925 Sulfite exporter TauE/SafE LCC91_06200 PF03737 Aldolase/RraA LCC91_06210 PF13458 Periplasmic binding protein LCC91_06225 PF00883 Cytosol aminopeptidase family, catalytic domain LCC91_06225 PF02789 Cytosol aminopeptidase family, N-terminal domain LCC91_06240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCC91_06240 PF03466 LysR substrate binding domain LCC91_06245 PF00155 Aminotransferase class I and II LCC91_06250 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LCC91_06250 PF00271 Helicase conserved C-terminal domain LCC91_06250 PF00270 DEAD/DEAH box helicase LCC91_06250 PF11898 Domain of unknown function (DUF3418) LCC91_06250 PF04408 Helicase associated domain (HA2) LCC91_06255 PF00696 Amino acid kinase family LCC91_06255 PF00583 Acetyltransferase (GNAT) family LCC91_06265 PF08007 Cupin superfamily protein LCC91_06275 PF00692 dUTPase LCC91_06280 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LCC91_06280 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LCC91_06290 PF03480 Bacterial extracellular solute-binding protein, family 7 LCC91_06295 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LCC91_06295 PF02779 Transketolase, pyrimidine binding domain LCC91_06295 PF02780 Transketolase, C-terminal domain LCC91_06300 PF00348 Polyprenyl synthetase LCC91_06305 PF02609 Exonuclease VII small subunit LCC91_06315 PF00892 EamA-like transporter family LCC91_06320 PF00581 Rhodanese-like domain LCC91_06340 PF00476 DNA polymerase family A LCC91_06340 PF01612 3'-5' exonuclease LCC91_06340 PF01367 5'-3' exonuclease, C-terminal SAM fold LCC91_06340 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LCC91_06350 PF01636 Phosphotransferase enzyme family LCC91_06365 PF01266 FAD dependent oxidoreductase LCC91_06370 PF13361 UvrD-like helicase C-terminal domain LCC91_06370 PF00580 UvrD/REP helicase N-terminal domain LCC91_06375 PF00691 OmpA family LCC91_06375 PF13677 Membrane MotB of proton-channel complex MotA/MotB LCC91_06380 PF01618 MotA/TolQ/ExbB proton channel family LCC91_06385 PF00478 IMP dehydrogenase / GMP reductase domain LCC91_06395 PF01384 Phosphate transporter family LCC91_06400 PF00929 Exonuclease LCC91_06405 PF01435 Peptidase family M48 LCC91_06405 PF16491 CAAX prenyl protease N-terminal, five membrane helices LCC91_06410 PF03193 RsgA GTPase LCC91_06420 PF00293 NUDIX domain LCC91_06425 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LCC91_06425 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LCC91_06445 PF00361 Proton-conducting membrane transporter LCC91_06450 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus LCC91_06450 PF00361 Proton-conducting membrane transporter LCC91_06455 PF00361 Proton-conducting membrane transporter LCC91_06455 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LCC91_06460 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LCC91_06465 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LCC91_06470 PF12838 4Fe-4S dicluster domain LCC91_06475 PF00146 NADH dehydrogenase LCC91_06480 PF00384 Molybdopterin oxidoreductase LCC91_06480 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LCC91_06480 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal LCC91_06485 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LCC91_06485 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LCC91_06485 PF10531 SLBB domain LCC91_06495 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LCC91_06500 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LCC91_06505 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LCC91_06510 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LCC91_06520 PF03840 Preprotein translocase SecG subunit LCC91_06525 PF00121 Triosephosphate isomerase LCC91_06530 PF08240 Alcohol dehydrogenase GroES-like domain LCC91_06530 PF00107 Zinc-binding dehydrogenase LCC91_06535 PF00013 KH domain LCC91_06535 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LCC91_06535 PF01138 3' exoribonuclease family, domain 1 LCC91_06535 PF03725 3' exoribonuclease family, domain 2 LCC91_06535 PF00575 S1 RNA binding domain LCC91_06540 PF00312 Ribosomal protein S15 LCC91_06545 PF13458 Periplasmic binding protein LCC91_06550 PF00814 Glycoprotease family LCC91_06555 PF03707 Bacterial signalling protein N terminal repeat LCC91_06555 PF00563 EAL domain LCC91_06555 PF00990 Diguanylate cyclase, GGDEF domain LCC91_06585 PF00749 tRNA synthetases class I (E and Q), catalytic domain LCC91_06590 PF01053 Cys/Met metabolism PLP-dependent enzyme LCC91_06595 PF00156 Phosphoribosyl transferase domain LCC91_06615 PF02875 Mur ligase family, glutamate ligase domain LCC91_06615 PF08245 Mur ligase middle domain LCC91_06620 PF03960 ArsC family LCC91_06625 PF06865 Pyrimidine/purine nucleoside phosphorylase LCC91_06630 PF00764 Arginosuccinate synthase LCC91_06645 PF01565 FAD binding domain LCC91_06645 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LCC91_06650 PF04461 Protein of unknown function (DUF520) LCC91_06660 PF02660 Glycerol-3-phosphate acyltransferase LCC91_06665 PF00248 Aldo/keto reductase family LCC91_06670 PF16177 Acetyl-coenzyme A synthetase N-terminus LCC91_06670 PF00501 AMP-binding enzyme LCC91_06670 PF13193 AMP-binding enzyme C-terminal domain LCC91_06675 PF12697 Alpha/beta hydrolase family LCC91_06690 PF11940 Domain of unknown function (DUF3458) Ig-like fold LCC91_06690 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LCC91_06690 PF01433 Peptidase family M1 domain LCC91_06695 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LCC91_06735 PF05598 Transposase domain (DUF772) LCC91_06750 PF02594 Uncharacterised ACR, YggU family COG1872 LCC91_06755 PF00440 Bacterial regulatory proteins, tetR family LCC91_06755 PF16859 Tetracyclin repressor-like, C-terminal domain LCC91_06765 PF00873 AcrB/AcrD/AcrF family LCC91_06770 PF05016 ParE toxin of type II toxin-antitoxin system, parDE LCC91_06780 PF02441 Flavoprotein LCC91_06780 PF04127 DNA / pantothenate metabolism flavoprotein LCC91_06785 PF06418 CTP synthase N-terminus LCC91_06785 PF00117 Glutamine amidotransferase class-I LCC91_06790 PF00793 DAHP synthetase I family LCC91_06800 PF00113 Enolase, C-terminal TIM barrel domain LCC91_06800 PF03952 Enolase, N-terminal domain LCC91_06805 PF04977 Septum formation initiator LCC91_06810 PF01430 Hsp33 protein LCC91_06815 PF00132 Bacterial transferase hexapeptide (six repeats) LCC91_06820 PF04305 Protein of unknown function (DUF455) LCC91_06825 PF02899 Phage integrase, N-terminal SAM-like domain LCC91_06825 PF00589 Phage integrase family LCC91_06830 PF16123 Hydroxyacylglutathione hydrolase C-terminus LCC91_06830 PF00753 Metallo-beta-lactamase superfamily LCC91_06835 PF01464 Transglycosylase SLT domain LCC91_06835 PF01476 LysM domain LCC91_06860 PF02190 ATP-dependent protease La (LON) substrate-binding domain LCC91_06860 PF05362 Lon protease (S16) C-terminal proteolytic domain LCC91_06860 PF00004 ATPase family associated with various cellular activities (AAA) LCC91_06865 PF07724 AAA domain (Cdc48 subfamily) LCC91_06865 PF10431 C-terminal, D2-small domain, of ClpB protein LCC91_06865 PF06689 ClpX C4-type zinc finger LCC91_06870 PF00574 Clp protease LCC91_06875 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LCC91_06875 PF05698 Bacterial trigger factor protein (TF) C-terminus LCC91_06875 PF05697 Bacterial trigger factor protein (TF) LCC91_06880 PF03600 Citrate transporter LCC91_06890 PF00990 Diguanylate cyclase, GGDEF domain LCC91_06905 PF00873 AcrB/AcrD/AcrF family LCC91_06920 PF00043 Glutathione S-transferase, C-terminal domain LCC91_06920 PF13417 Glutathione S-transferase, N-terminal domain LCC91_06925 PF13419 Haloacid dehalogenase-like hydrolase LCC91_06930 PF00762 Ferrochelatase LCC91_06935 PF01479 S4 domain LCC91_06955 PF01571 Aminomethyltransferase folate-binding domain LCC91_06955 PF08669 Glycine cleavage T-protein C-terminal barrel domain LCC91_06960 PF01597 Glycine cleavage H-protein LCC91_06965 PF02347 Glycine cleavage system P-protein LCC91_06975 PF03458 UPF0126 domain LCC91_06980 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LCC91_06985 PF08501 Shikimate dehydrogenase substrate binding domain LCC91_06985 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LCC91_06985 PF01488 Shikimate / quinate 5-dehydrogenase LCC91_06990 PF00923 Transaldolase/Fructose-6-phosphate aldolase LCC91_07010 PF01545 Cation efflux family LCC91_07025 PF03773 Predicted permease LCC91_07030 PF00990 Diguanylate cyclase, GGDEF domain LCC91_07030 PF00563 EAL domain LCC91_07030 PF03707 Bacterial signalling protein N terminal repeat LCC91_07040 PF01523 Putative modulator of DNA gyrase LCC91_07045 PF04751 Protein of unknown function (DUF615) LCC91_07050 PF00994 Probable molybdopterin binding domain LCC91_07055 PF00132 Bacterial transferase hexapeptide (six repeats) LCC91_07060 PF00588 SpoU rRNA Methylase family LCC91_07065 PF00459 Inositol monophosphatase family LCC91_07070 PF00488 MutS domain V LCC91_07070 PF05188 MutS domain II LCC91_07070 PF05192 MutS domain III LCC91_07070 PF05190 MutS family domain IV LCC91_07070 PF01624 MutS domain I LCC91_07085 PF02321 Outer membrane efflux protein LCC91_07090 PF00534 Glycosyl transferases group 1 LCC91_07090 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LCC91_07095 PF00534 Glycosyl transferases group 1 LCC91_07100 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LCC91_07100 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LCC91_07100 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LCC91_07100 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LCC91_07110 PF00216 Bacterial DNA-binding protein LCC91_07115 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LCC91_07115 PF03484 tRNA synthetase B5 domain LCC91_07115 PF03147 Ferredoxin-fold anticodon binding domain LCC91_07115 PF03483 B3/4 domain LCC91_07115 PF01588 Putative tRNA binding domain LCC91_07120 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LCC91_07120 PF01409 tRNA synthetases class II core domain (F) LCC91_07125 PF00453 Ribosomal protein L20 LCC91_07130 PF01632 Ribosomal protein L35 LCC91_07135 PF00707 Translation initiation factor IF-3, C-terminal domain LCC91_07135 PF05198 Translation initiation factor IF-3, N-terminal domain LCC91_07140 PF03129 Anticodon binding domain LCC91_07140 PF02824 TGS domain LCC91_07140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LCC91_07140 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LCC91_07145 PF00881 Nitroreductase family LCC91_07150 PF00463 Isocitrate lyase family LCC91_07160 PF02445 Quinolinate synthetase A protein LCC91_07165 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LCC91_07165 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LCC91_07170 PF02548 Ketopantoate hydroxymethyltransferase LCC91_07175 PF02569 Pantoate-beta-alanine ligase LCC91_07180 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LCC91_07180 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LCC91_07185 PF02556 Preprotein translocase subunit SecB LCC91_07190 PF00462 Glutaredoxin LCC91_07200 PF00300 Histidine phosphatase superfamily (branch 1) LCC91_07205 PF13180 PDZ domain LCC91_07205 PF03572 Peptidase family S41 LCC91_07210 PF00899 ThiF family LCC91_07220 PF01227 GTP cyclohydrolase I LCC91_07230 PF13091 PLD-like domain LCC91_07240 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LCC91_07245 PF01850 PIN domain LCC91_07250 PF00293 NUDIX domain LCC91_07270 PF00700 Bacterial flagellin C-terminal helical region LCC91_07270 PF07196 Flagellin hook IN motif LCC91_07270 PF00669 Bacterial flagellin N-terminal helical region LCC91_07275 PF02465 Flagellar hook-associated protein 2 N-terminus LCC91_07275 PF07195 Flagellar hook-associated protein 2 C-terminus LCC91_07280 PF00669 Bacterial flagellin N-terminal helical region LCC91_07280 PF00700 Bacterial flagellin C-terminal helical region LCC91_07280 PF07196 Flagellin hook IN motif LCC91_07285 PF02561 Flagellar protein FliS LCC91_07295 PF02049 Flagellar hook-basal body complex protein FliE LCC91_07300 PF01514 Secretory protein of YscJ/FliF family LCC91_07300 PF08345 Flagellar M-ring protein C-terminal LCC91_07305 PF01706 FliG C-terminal domain LCC91_07305 PF14841 FliG middle domain LCC91_07305 PF14842 FliG N-terminal domain LCC91_07310 PF02108 Flagellar assembly protein FliH LCC91_07315 PF18269 T3SS EscN ATPase C-terminal domain LCC91_07315 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LCC91_07335 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LCC91_07335 PF02154 Flagellar motor switch protein FliM LCC91_07340 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LCC91_07340 PF16973 Flagellar motor switch protein FliN N-terminal LCC91_07350 PF00813 FliP family LCC91_07355 PF01313 Bacterial export proteins, family 3 LCC91_07360 PF01311 Bacterial export proteins, family 1 LCC91_07365 PF00196 Bacterial regulatory proteins, luxR family LCC91_07365 PF00072 Response regulator receiver domain LCC91_07370 PF05231 MASE1 LCC91_07370 PF07730 Histidine kinase LCC91_07370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCC91_07380 PF00072 Response regulator receiver domain LCC91_07385 PF01584 CheW-like domain LCC91_07385 PF09078 CheY binding LCC91_07385 PF02895 Signal transducing histidine kinase, homodimeric domain LCC91_07385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCC91_07385 PF01627 Hpt domain LCC91_07390 PF01739 CheR methyltransferase, SAM binding domain LCC91_07390 PF03705 CheR methyltransferase, all-alpha domain LCC91_07395 PF03975 CheD chemotactic sensory transduction LCC91_07400 PF01339 CheB methylesterase LCC91_07400 PF00072 Response regulator receiver domain LCC91_07410 PF01063 Amino-transferase class IV LCC91_07435 PF03061 Thioesterase superfamily LCC91_07440 PF00378 Enoyl-CoA hydratase/isomerase LCC91_07445 PF00108 Thiolase, N-terminal domain LCC91_07445 PF02803 Thiolase, C-terminal domain LCC91_07450 PF00378 Enoyl-CoA hydratase/isomerase LCC91_07450 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LCC91_07450 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LCC91_07460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LCC91_07460 PF02770 Acyl-CoA dehydrogenase, middle domain LCC91_07460 PF12806 Acetyl-CoA dehydrogenase C-terminal like LCC91_07460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LCC91_07470 PF00696 Amino acid kinase family LCC91_07480 PF00689 Cation transporting ATPase, C-terminus LCC91_07480 PF00690 Cation transporter/ATPase, N-terminus LCC91_07485 PF00919 Uncharacterized protein family UPF0004 LCC91_07485 PF04055 Radical SAM superfamily LCC91_07485 PF01938 TRAM domain LCC91_07490 PF03372 Endonuclease/Exonuclease/phosphatase family LCC91_07495 PF02954 Bacterial regulatory protein, Fis family LCC91_07495 PF00072 Response regulator receiver domain LCC91_07495 PF00158 Sigma-54 interaction domain LCC91_07500 PF00512 His Kinase A (phospho-acceptor) domain LCC91_07500 PF00989 PAS fold LCC91_07500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCC91_07510 PF00120 Glutamine synthetase, catalytic domain LCC91_07510 PF03951 Glutamine synthetase, beta-Grasp domain LCC91_07515 PF02464 Competence-damaged protein LCC91_07515 PF18146 Damage-inducible protein CinA KH domain LCC91_07515 PF00994 Probable molybdopterin binding domain LCC91_07525 PF00849 RNA pseudouridylate synthase LCC91_07525 PF01479 S4 domain LCC91_07540 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase LCC91_07550 PF03900 Porphobilinogen deaminase, C-terminal domain LCC91_07550 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LCC91_07555 PF04397 LytTr DNA-binding domain LCC91_07555 PF00072 Response regulator receiver domain LCC91_07560 PF14698 Argininosuccinate lyase C-terminal LCC91_07560 PF00206 Lyase LCC91_07565 PF17284 Spermidine synthase tetramerisation domain LCC91_07570 PF00034 Cytochrome c LCC91_07575 PF00004 ATPase family associated with various cellular activities (AAA) LCC91_07575 PF17862 AAA+ lid domain LCC91_07575 PF01434 Peptidase family M41 LCC91_07640 PF04984 Phage tail sheath protein subtilisin-like domain LCC91_07640 PF17482 Phage tail sheath C-terminal domain LCC91_07660 PF05598 Transposase domain (DUF772) LCC91_07705 PF05069 Phage virion morphogenesis family LCC91_07805 PF01381 Helix-turn-helix LCC91_07805 PF00717 Peptidase S24-like LCC91_07855 PF00271 Helicase conserved C-terminal domain LCC91_07855 PF04851 Type III restriction enzyme, res subunit LCC91_07865 PF00692 dUTPase LCC91_07920 PF00589 Phage integrase family LCC91_07930 PF00528 Binding-protein-dependent transport system inner membrane component LCC91_07935 PF00005 ABC transporter LCC91_07935 PF08402 TOBE domain LCC91_07955 PF02630 SCO1/SenC LCC91_07965 PF00390 Malic enzyme, N-terminal domain LCC91_07965 PF01515 Phosphate acetyl/butaryl transferase LCC91_07965 PF03949 Malic enzyme, NAD binding domain LCC91_07990 PF06750 Bacterial Peptidase A24 N-terminal domain LCC91_07990 PF01478 Type IV leader peptidase family LCC91_07995 PF01121 Dephospho-CoA kinase LCC91_08000 PF07072 Cell division protein LCC91_08005 PF03884 DNA gyrase inhibitor YacG LCC91_08015 PF00293 NUDIX domain LCC91_08025 PF01960 ArgJ family LCC91_08030 PF02810 SEC-C motif LCC91_08030 PF07517 SecA DEAD-like domain LCC91_08030 PF01043 SecA preprotein cross-linking domain LCC91_08030 PF07516 SecA Wing and Scaffold domain LCC91_08045 PF01850 PIN domain LCC91_08050 PF07995 Glucose / Sorbosone dehydrogenase LCC91_08075 PF02463 RecF/RecN/SMC N terminal domain LCC91_08080 PF01555 DNA methylase LCC91_08085 PF00140 Sigma-70 factor, region 1.2 LCC91_08085 PF04545 Sigma-70, region 4 LCC91_08085 PF04542 Sigma-70 region 2 LCC91_08100 PF00152 tRNA synthetases class II (D, K and N) LCC91_08100 PF01336 OB-fold nucleic acid binding domain LCC91_08105 PF00005 ABC transporter LCC91_08110 PF00005 ABC transporter LCC91_08110 PF12399 Branched-chain amino acid ATP-binding cassette transporter LCC91_08115 PF02653 Branched-chain amino acid transport system / permease component LCC91_08115 PF11862 Domain of unknown function (DUF3382) LCC91_08120 PF02653 Branched-chain amino acid transport system / permease component LCC91_08125 PF16193 AAA C-terminal domain LCC91_08125 PF00004 ATPase family associated with various cellular activities (AAA) LCC91_08125 PF12002 MgsA AAA+ ATPase C terminal LCC91_08130 PF01810 LysE type translocator LCC91_08135 PF03548 Outer membrane lipoprotein carrier protein LolA LCC91_08145 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCC91_08150 PF00830 Ribosomal L28 family LCC91_08155 PF00471 Ribosomal protein L33 LCC91_08175 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LCC91_08175 PF14579 Helix-hairpin-helix motif LCC91_08175 PF02811 PHP domain LCC91_08175 PF01336 OB-fold nucleic acid binding domain LCC91_08175 PF07733 Bacterial DNA polymerase III alpha NTPase domain LCC91_08180 PF01726 LexA DNA binding domain LCC91_08180 PF00717 Peptidase S24-like LCC91_08185 PF01926 50S ribosome-binding GTPase LCC91_08195 PF13419 Haloacid dehalogenase-like hydrolase LCC91_08205 PF00849 RNA pseudouridylate synthase LCC91_08205 PF01479 S4 domain LCC91_08220 PF01070 FMN-dependent dehydrogenase LCC91_08225 PF02872 5'-nucleotidase, C-terminal domain LCC91_08225 PF00149 Calcineurin-like phosphoesterase LCC91_08240 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LCC91_08245 PF00034 Cytochrome c LCC91_08250 PF00174 Oxidoreductase molybdopterin binding domain LCC91_08255 PF01022 Bacterial regulatory protein, arsR family LCC91_08260 PF00005 ABC transporter LCC91_08265 PF02687 FtsX-like permease family LCC91_08265 PF12704 MacB-like periplasmic core domain LCC91_08275 PF17768 RecJ OB domain LCC91_08275 PF02272 DHHA1 domain LCC91_08275 PF01368 DHH family LCC91_08280 PF00849 RNA pseudouridylate synthase LCC91_08295 PF01734 Patatin-like phospholipase LCC91_08300 PF01144 Coenzyme A transferase LCC91_08305 PF01144 Coenzyme A transferase LCC91_08310 PF00196 Bacterial regulatory proteins, luxR family LCC91_08310 PF00072 Response regulator receiver domain LCC91_08315 PF04542 Sigma-70 region 2 LCC91_08315 PF08281 Sigma-70, region 4 LCC91_08335 PF14489 QueF-like protein LCC91_08335 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LCC91_08345 PF03883 Peroxide stress protein YaaA LCC91_08350 PF18019 HD domain LCC91_08350 PF18395 Cas3 C-terminal domain LCC91_08380 PF01867 CRISPR associated protein Cas1 LCC91_08390 PF05598 Transposase domain (DUF772) LCC91_08415 PF02754 Cysteine-rich domain LCC91_08415 PF13183 4Fe-4S dicluster domain LCC91_08420 PF02915 Rubrerythrin LCC91_08425 PF08264 Anticodon-binding domain of tRNA LCC91_08425 PF00133 tRNA synthetases class I (I, L, M and V) LCC91_08425 PF10458 Valyl tRNA synthetase tRNA binding arm LCC91_08430 PF01206 Sulfurtransferase TusA LCC91_08435 PF00291 Pyridoxal-phosphate dependent enzyme LCC91_08450 PF00970 Oxidoreductase FAD-binding domain LCC91_08450 PF00111 2Fe-2S iron-sulfur cluster binding domain LCC91_08450 PF00175 Oxidoreductase NAD-binding domain LCC91_08455 PF02630 SCO1/SenC LCC91_08460 PF01040 UbiA prenyltransferase family LCC91_08465 PF02628 Cytochrome oxidase assembly protein LCC91_08485 PF00510 Cytochrome c oxidase subunit III LCC91_08495 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 LCC91_08505 PF00115 Cytochrome C and Quinol oxidase polypeptide I LCC91_08510 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LCC91_08510 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LCC91_08520 PF08241 Methyltransferase domain LCC91_08525 PF00156 Phosphoribosyl transferase domain LCC91_08530 PF00588 SpoU rRNA Methylase family LCC91_08535 PF01575 MaoC like domain LCC91_08545 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LCC91_08545 PF01464 Transglycosylase SLT domain LCC91_08550 PF00464 Serine hydroxymethyltransferase LCC91_08555 PF03477 ATP cone domain LCC91_08560 PF06580 Histidine kinase LCC91_08560 PF07694 5TMR of 5TMR-LYT LCC91_08595 PF05567 Neisseria PilC beta-propeller domain LCC91_08610 PF00677 Lumazine binding domain LCC91_08615 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LCC91_08615 PF00925 GTP cyclohydrolase II LCC91_08620 PF00885 6,7-dimethyl-8-ribityllumazine synthase LCC91_08625 PF01029 NusB family LCC91_08630 PF03061 Thioesterase superfamily LCC91_08635 PF01618 MotA/TolQ/ExbB proton channel family LCC91_08640 PF02472 Biopolymer transport protein ExbD/TolR LCC91_08650 PF00595 PDZ domain LCC91_08660 PF07733 Bacterial DNA polymerase III alpha NTPase domain LCC91_08660 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LCC91_08660 PF14579 Helix-hairpin-helix motif LCC91_08660 PF02811 PHP domain LCC91_08660 PF01336 OB-fold nucleic acid binding domain LCC91_08665 PF03358 NADPH-dependent FMN reductase LCC91_08670 PF17954 Quercetinase C-terminal cupin domain LCC91_08670 PF02678 Pirin LCC91_08675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCC91_08675 PF03466 LysR substrate binding domain LCC91_08680 PF01593 Flavin containing amine oxidoreductase LCC91_08685 PF00749 tRNA synthetases class I (E and Q), catalytic domain LCC91_08690 PF02390 Putative methyltransferase LCC91_08695 PF01872 RibD C-terminal domain LCC91_08695 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LCC91_08700 PF00849 RNA pseudouridylate synthase LCC91_08720 PF02272 DHHA1 domain LCC91_08720 PF01411 tRNA synthetases class II (A) LCC91_08720 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LCC91_08725 PF03060 Nitronate monooxygenase LCC91_08730 PF00186 Dihydrofolate reductase LCC91_08750 PF00448 SRP54-type protein, GTPase domain LCC91_08750 PF02881 SRP54-type protein, helical bundle domain LCC91_08750 PF02978 Signal peptide binding domain LCC91_08765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCC91_08765 PF00512 His Kinase A (phospho-acceptor) domain LCC91_08785 PF00158 Sigma-54 interaction domain LCC91_08785 PF00072 Response regulator receiver domain LCC91_08785 PF02954 Bacterial regulatory protein, Fis family LCC91_08795 PF01850 PIN domain LCC91_08830 PF00535 Glycosyl transferase family 2 LCC91_08835 PF00534 Glycosyl transferases group 1 LCC91_08835 PF13439 Glycosyltransferase Family 4 LCC91_08840 PF00534 Glycosyl transferases group 1 LCC91_08840 PF13439 Glycosyltransferase Family 4 LCC91_08850 PF01609 Transposase DDE domain LCC91_08855 PF13847 Methyltransferase domain LCC91_08855 PF03551 Transcriptional regulator PadR-like family LCC91_08860 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LCC91_08860 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LCC91_08860 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LCC91_08870 PF16363 GDP-mannose 4,6 dehydratase LCC91_08885 PF08011 PD-(D/E)XK nuclease superfamily LCC91_08885 PF09820 Predicted AAA-ATPase LCC91_08890 PF05685 Putative restriction endonuclease LCC91_08895 PF02401 LytB protein LCC91_08900 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LCC91_08905 PF04002 RadC-like JAB domain LCC91_08910 PF01713 Smr domain LCC91_08925 PF02634 FdhD/NarQ family LCC91_08945 PF13247 4Fe-4S dicluster domain LCC91_08950 PF00384 Molybdopterin oxidoreductase LCC91_08950 PF01568 Molydopterin dinucleotide binding domain LCC91_08950 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LCC91_08960 PF02954 Bacterial regulatory protein, Fis family LCC91_08960 PF00158 Sigma-54 interaction domain LCC91_08960 PF00072 Response regulator receiver domain LCC91_08965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCC91_08965 PF00512 His Kinase A (phospho-acceptor) domain LCC91_08965 PF00989 PAS fold LCC91_08990 PF10609 NUBPL iron-transfer P-loop NTPase LCC91_08995 PF09334 tRNA synthetases class I (M) LCC91_08995 PF01588 Putative tRNA binding domain LCC91_09000 PF01740 STAS domain LCC91_09000 PF00916 Sulfate permease family LCC91_09010 PF02616 Segregation and condensation protein ScpA LCC91_09015 PF00890 FAD binding domain LCC91_09015 PF02910 Fumarate reductase flavoprotein C-term LCC91_09030 PF06969 HemN C-terminal domain LCC91_09030 PF04055 Radical SAM superfamily LCC91_09035 PF00027 Cyclic nucleotide-binding domain LCC91_09035 PF13545 Crp-like helix-turn-helix domain LCC91_09050 PF13746 4Fe-4S dicluster domain LCC91_09050 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase LCC91_09050 PF12801 4Fe-4S binding domain LCC91_09055 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LCC91_09055 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP LCC91_09070 PF00115 Cytochrome C and Quinol oxidase polypeptide I LCC91_09080 PF00403 Heavy-metal-associated domain LCC91_09085 PF00582 Universal stress protein family LCC91_09090 PF00501 AMP-binding enzyme LCC91_09090 PF13193 AMP-binding enzyme C-terminal domain LCC91_09095 PF01790 Prolipoprotein diacylglyceryl transferase LCC91_09105 PF00920 Dehydratase family LCC91_09115 PF00034 Cytochrome c LCC91_09120 PF00501 AMP-binding enzyme LCC91_09120 PF13193 AMP-binding enzyme C-terminal domain LCC91_09120 PF16177 Acetyl-coenzyme A synthetase N-terminus LCC91_09125 PF03350 Uncharacterized protein family, UPF0114 LCC91_09140 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB LCC91_09145 PF01381 Helix-turn-helix LCC91_09155 PF01189 16S rRNA methyltransferase RsmB/F LCC91_09155 PF01029 NusB family LCC91_09160 PF16658 Class II release factor RF3, C-terminal domain LCC91_09160 PF03144 Elongation factor Tu domain 2 LCC91_09160 PF00009 Elongation factor Tu GTP binding domain LCC91_09165 PF09335 SNARE associated Golgi protein LCC91_09175 PF00551 Formyl transferase LCC91_09180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LCC91_09180 PF02770 Acyl-CoA dehydrogenase, middle domain LCC91_09180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LCC91_09185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LCC91_09185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LCC91_09185 PF02770 Acyl-CoA dehydrogenase, middle domain LCC91_09190 PF05199 GMC oxidoreductase LCC91_09195 PF00171 Aldehyde dehydrogenase family LCC91_09210 PF06574 FAD synthetase LCC91_09210 PF01687 Riboflavin kinase LCC91_09215 PF06827 Zinc finger found in FPG and IleRS LCC91_09215 PF08264 Anticodon-binding domain of tRNA LCC91_09215 PF00133 tRNA synthetases class I (I, L, M and V) LCC91_09220 PF01252 Signal peptidase (SPase) II LCC91_09225 PF00672 HAMP domain LCC91_09225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCC91_09225 PF02203 Tar ligand binding domain homologue LCC91_09245 PF08240 Alcohol dehydrogenase GroES-like domain LCC91_09245 PF00107 Zinc-binding dehydrogenase LCC91_09250 PF00892 EamA-like transporter family LCC91_09255 PF00106 short chain dehydrogenase LCC91_09265 PF00990 Diguanylate cyclase, GGDEF domain LCC91_09265 PF00072 Response regulator receiver domain LCC91_09285 PF01026 TatD related DNase LCC91_09290 PF03401 Tripartite tricarboxylate transporter family receptor LCC91_09305 PF08240 Alcohol dehydrogenase GroES-like domain LCC91_09305 PF00107 Zinc-binding dehydrogenase LCC91_09310 PF13193 AMP-binding enzyme C-terminal domain LCC91_09310 PF00501 AMP-binding enzyme LCC91_09315 PF07690 Major Facilitator Superfamily LCC91_09330 PF07732 Multicopper oxidase LCC91_09330 PF00394 Multicopper oxidase LCC91_09345 PF03232 Ubiquinone biosynthesis protein COQ7 LCC91_09355 PF00585 C-terminal regulatory domain of Threonine dehydratase LCC91_09355 PF00291 Pyridoxal-phosphate dependent enzyme LCC91_09370 PF08334 Type II secretion system (T2SS), protein G LCC91_09370 PF07963 Prokaryotic N-terminal methylation motif LCC91_09375 PF12019 Type II transport protein GspH LCC91_09380 PF07963 Prokaryotic N-terminal methylation motif LCC91_09380 PF02501 Type II secretion system (T2SS), protein I LCC91_09390 PF03934 Type II secretion system (T2SS), protein K LCC91_09410 PF00263 Bacterial type II and III secretion system protein LCC91_09410 PF03958 Bacterial type II/III secretion system short domain LCC91_09415 PF00437 Type II/IV secretion system protein LCC91_09420 PF00482 Type II secretion system (T2SS), protein F LCC91_09425 PF01510 N-acetylmuramoyl-L-alanine amidase LCC91_09430 PF03477 ATP cone domain LCC91_09430 PF02867 Ribonucleotide reductase, barrel domain LCC91_09430 PF00317 Ribonucleotide reductase, all-alpha domain LCC91_09435 PF00268 Ribonucleotide reductase, small chain LCC91_09445 PF00962 Adenosine/AMP deaminase LCC91_09450 PF02608 ABC transporter substrate-binding protein PnrA-like LCC91_09455 PF00356 Bacterial regulatory proteins, lacI family LCC91_09460 PF00005 ABC transporter LCC91_09465 PF02653 Branched-chain amino acid transport system / permease component LCC91_09470 PF02653 Branched-chain amino acid transport system / permease component LCC91_09475 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LCC91_09480 PF01048 Phosphorylase superfamily LCC91_09485 PF01791 DeoC/LacD family aldolase LCC91_09490 PF00591 Glycosyl transferase family, a/b domain LCC91_09490 PF02885 Glycosyl transferase family, helical bundle domain LCC91_09490 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LCC91_09495 PF01676 Metalloenzyme superfamily LCC91_09510 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LCC91_09510 PF02785 Biotin carboxylase C-terminal domain LCC91_09510 PF00289 Biotin carboxylase, N-terminal domain LCC91_09515 PF00364 Biotin-requiring enzyme LCC91_09520 PF00437 Type II/IV secretion system protein LCC91_09520 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LCC91_09525 PF00482 Type II secretion system (T2SS), protein F LCC91_09530 PF00072 Response regulator receiver domain LCC91_09535 PF00072 Response regulator receiver domain LCC91_09565 PF01553 Acyltransferase LCC91_09570 PF01979 Amidohydrolase family LCC91_09575 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LCC91_09575 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LCC91_09580 PF00156 Phosphoribosyl transferase domain LCC91_09585 PF03652 Holliday junction resolvase LCC91_09590 PF02622 Uncharacterized ACR, COG1678 LCC91_09595 PF03441 FAD binding domain of DNA photolyase LCC91_09595 PF00875 DNA photolyase LCC91_09605 PF00301 Rubredoxin LCC91_09615 PF00202 Aminotransferase class-III LCC91_09620 PF03575 Peptidase family S51 LCC91_09625 PF16325 Peptidase family U32 C-terminal domain LCC91_09625 PF01136 Peptidase family U32 LCC91_09630 PF00330 Aconitase family (aconitate hydratase) LCC91_09630 PF06434 Aconitate hydratase 2 N-terminus LCC91_09630 PF11791 Aconitate B N-terminal domain LCC91_09640 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LCC91_09640 PF00056 lactate/malate dehydrogenase, NAD binding domain LCC91_09645 PF07702 UTRA domain LCC91_09645 PF00392 Bacterial regulatory proteins, gntR family LCC91_09660 PF02910 Fumarate reductase flavoprotein C-term LCC91_09660 PF00890 FAD binding domain LCC91_09665 PF13085 2Fe-2S iron-sulfur cluster binding domain LCC91_09670 PF03937 Flavinator of succinate dehydrogenase LCC91_09675 PF00285 Citrate synthase, C-terminal domain LCC91_09680 PF00330 Aconitase family (aconitate hydratase) LCC91_09690 PF00694 Aconitase C-terminal domain LCC91_09695 PF00180 Isocitrate/isopropylmalate dehydrogenase LCC91_09705 PF01118 Semialdehyde dehydrogenase, NAD binding domain LCC91_09705 PF02774 Semialdehyde dehydrogenase, dimerisation domain LCC91_09715 PF01416 tRNA pseudouridine synthase LCC91_09720 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LCC91_09725 PF00291 Pyridoxal-phosphate dependent enzyme LCC91_09730 PF00290 Tryptophan synthase alpha chain LCC91_09735 PF01039 Carboxyl transferase domain LCC91_09735 PF17848 Acetyl-coA carboxylase zinc finger domain LCC91_09750 PF12441 CopG antitoxin of type II toxin-antitoxin system LCC91_09760 PF00933 Glycosyl hydrolase family 3 N terminal domain LCC91_09765 PF01648 4'-phosphopantetheinyl transferase superfamily LCC91_09770 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LCC91_09775 PF02565 Recombination protein O C terminal LCC91_09775 PF11967 Recombination protein O N terminal LCC91_09780 PF07650 KH domain LCC91_09780 PF01926 50S ribosome-binding GTPase LCC91_09785 PF00035 Double-stranded RNA binding motif LCC91_09785 PF14622 Ribonuclease-III-like LCC91_09795 PF10502 Signal peptidase, peptidase S26 LCC91_09800 PF00679 Elongation factor G C-terminus LCC91_09800 PF00009 Elongation factor Tu GTP binding domain LCC91_09800 PF06421 GTP-binding protein LepA C-terminus LCC91_09805 PF13180 PDZ domain LCC91_09820 PF04542 Sigma-70 region 2 LCC91_09820 PF08281 Sigma-70, region 4 LCC91_09830 PF00109 Beta-ketoacyl synthase, N-terminal domain LCC91_09830 PF02801 Beta-ketoacyl synthase, C-terminal domain LCC91_09835 PF00550 Phosphopantetheine attachment site LCC91_09845 PF00698 Acyl transferase domain LCC91_09850 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LCC91_09850 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LCC91_09855 PF02504 Fatty acid synthesis protein LCC91_09860 PF01783 Ribosomal L32p protein family LCC91_09865 PF02620 Large ribosomal RNA subunit accumulation protein YceD LCC91_09870 PF01243 Pyridoxamine 5'-phosphate oxidase LCC91_09870 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LCC91_09875 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system LCC91_09880 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system LCC91_09885 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LCC91_09890 PF12627 Probable RNA and SrmB- binding site of polymerase A LCC91_09890 PF01743 Poly A polymerase head domain LCC91_09890 PF12626 Polymerase A arginine-rich C-terminus LCC91_09900 PF00308 Bacterial dnaA protein LCC91_09905 PF01594 AI-2E family transporter LCC91_09910 PF02769 AIR synthase related protein, C-terminal domain LCC91_09910 PF00586 AIR synthase related protein, N-terminal domain LCC91_09915 PF13369 Transglutaminase-like superfamily LCC91_09920 PF03023 Lipid II flippase MurJ LCC91_09925 PF02811 PHP domain LCC91_09930 PF01300 Telomere recombination LCC91_09935 PF02163 Peptidase family M50 LCC91_09940 PF00579 tRNA synthetases class I (W and Y) LCC91_09995 PF00589 Phage integrase family LCC91_09995 PF13356 Arm DNA-binding domain LCC91_10005 PF04386 Stringent starvation protein B LCC91_10010 PF00043 Glutathione S-transferase, C-terminal domain LCC91_10010 PF02798 Glutathione S-transferase, N-terminal domain LCC91_10015 PF02167 Cytochrome C1 family LCC91_10020 PF00032 Cytochrome b(C-terminal)/b6/petD LCC91_10020 PF00033 Cytochrome b/b6/petB LCC91_10025 PF00355 Rieske [2Fe-2S] domain LCC91_10025 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LCC91_10030 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LCC91_10035 PF01784 NIF3 (NGG1p interacting factor 3) LCC91_10045 PF13180 PDZ domain LCC91_10045 PF17820 PDZ domain LCC91_10050 PF00902 Sec-independent protein translocase protein (TatC) LCC91_10055 PF02416 mttA/Hcf106 family LCC91_10060 PF02416 mttA/Hcf106 family LCC91_10065 PF01230 HIT domain LCC91_10075 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LCC91_10080 PF01502 Phosphoribosyl-AMP cyclohydrolase LCC91_10085 PF00977 Histidine biosynthesis protein LCC91_10090 PF00977 Histidine biosynthesis protein LCC91_10095 PF00117 Glutamine amidotransferase class-I LCC91_10100 PF00475 Imidazoleglycerol-phosphate dehydratase LCC91_10105 PF00155 Aminotransferase class I and II LCC91_10110 PF00815 Histidinol dehydrogenase LCC91_10115 PF01634 ATP phosphoribosyltransferase LCC91_10120 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LCC91_10125 PF01722 BolA-like protein LCC91_10130 PF01061 ABC-2 type transporter LCC91_10135 PF00005 ABC transporter LCC91_10150 PF04333 MlaA lipoprotein LCC91_10155 PF02470 MlaD protein LCC91_10160 PF02405 Permease MlaE LCC91_10165 PF00005 ABC transporter LCC91_10170 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LCC91_10170 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCC91_10175 PF00310 Glutamine amidotransferases class-II LCC91_10175 PF04898 Glutamate synthase central domain LCC91_10175 PF01645 Conserved region in glutamate synthase LCC91_10175 PF01493 GXGXG motif LCC91_10185 PF07690 Major Facilitator Superfamily LCC91_10190 PF13286 Phosphohydrolase-associated domain LCC91_10190 PF01966 HD domain LCC91_10195 PF01761 3-dehydroquinate synthase LCC91_10200 PF01202 Shikimate kinase LCC91_10210 PF11741 AMIN domain LCC91_10210 PF00263 Bacterial type II and III secretion system protein LCC91_10210 PF03958 Bacterial type II/III secretion system short domain LCC91_10210 PF07660 Secretin and TonB N terminus short domain LCC91_10225 PF05137 Fimbrial assembly protein (PilN) LCC91_10235 PF17092 Penicillin-binding protein OB-like domain LCC91_10235 PF00912 Transglycosylase LCC91_10235 PF00905 Penicillin binding protein transpeptidase domain LCC91_10240 PF01491 Frataxin-like domain LCC91_10250 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LCC91_10250 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LCC91_10255 PF01794 Ferric reductase like transmembrane component LCC91_10260 PF00174 Oxidoreductase molybdopterin binding domain LCC91_10265 PF01578 Cytochrome C assembly protein LCC91_10270 PF05140 ResB-like family LCC91_10275 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LCC91_10280 PF01926 50S ribosome-binding GTPase LCC91_10295 PF02773 S-adenosylmethionine synthetase, C-terminal domain LCC91_10295 PF02772 S-adenosylmethionine synthetase, central domain LCC91_10295 PF00438 S-adenosylmethionine synthetase, N-terminal domain LCC91_10305 PF00953 Glycosyl transferase family 4 LCC91_10305 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LCC91_10310 PF01551 Peptidase family M23 LCC91_10310 PF10145 Phage-related minor tail protein LCC91_10310 PF01464 Transglycosylase SLT domain LCC91_10320 PF00535 Glycosyl transferase family 2 LCC91_10330 PF01757 Acyltransferase family LCC91_10350 PF00005 ABC transporter LCC91_10350 PF14524 Wzt C-terminal domain LCC91_10375 PF00263 Bacterial type II and III secretion system protein LCC91_10375 PF03958 Bacterial type II/III secretion system short domain LCC91_10405 PF07963 Prokaryotic N-terminal methylation motif LCC91_10410 PF07963 Prokaryotic N-terminal methylation motif LCC91_10415 PF07963 Prokaryotic N-terminal methylation motif LCC91_10415 PF08334 Type II secretion system (T2SS), protein G LCC91_10420 PF00482 Type II secretion system (T2SS), protein F LCC91_10425 PF00437 Type II/IV secretion system protein LCC91_10425 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LCC91_10435 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LCC91_10440 PF00483 Nucleotidyl transferase LCC91_10455 PF04321 RmlD substrate binding domain LCC91_10465 PF16363 GDP-mannose 4,6 dehydratase LCC91_10480 PF01568 Molydopterin dinucleotide binding domain LCC91_10480 PF00384 Molybdopterin oxidoreductase LCC91_10480 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LCC91_10485 PF07687 Peptidase dimerisation domain LCC91_10485 PF01546 Peptidase family M20/M25/M40 LCC91_10490 PF03309 Type III pantothenate kinase LCC91_10505 PF02310 B12 binding domain LCC91_10505 PF01642 Methylmalonyl-CoA mutase LCC91_10520 PF01551 Peptidase family M23 LCC91_10520 PF01464 Transglycosylase SLT domain LCC91_10520 PF10145 Phage-related minor tail protein LCC91_10530 PF02583 Metal-sensitive transcriptional repressor LCC91_10535 PF01966 HD domain LCC91_10535 PF12627 Probable RNA and SrmB- binding site of polymerase A LCC91_10535 PF01743 Poly A polymerase head domain LCC91_10540 PF00085 Thioredoxin LCC91_10565 PF01171 PP-loop family LCC91_10575 PF01584 CheW-like domain LCC91_10575 PF00072 Response regulator receiver domain LCC91_10580 PF00300 Histidine phosphatase superfamily (branch 1) LCC91_10585 PF05491 RuvB C-terminal winged helix domain LCC91_10585 PF17864 RuvB AAA lid domain LCC91_10585 PF05496 Holliday junction DNA helicase RuvB P-loop domain LCC91_10590 PF07499 RuvA, C-terminal domain LCC91_10590 PF01330 RuvA N terminal domain LCC91_10595 PF02562 PhoH-like protein LCC91_10600 PF02130 Uncharacterized protein family UPF0054 LCC91_10605 PF01545 Cation efflux family LCC91_10605 PF16916 Dimerisation domain of Zinc Transporter LCC91_10610 PF01479 S4 domain LCC91_10610 PF00579 tRNA synthetases class I (W and Y) LCC91_10615 PF01551 Peptidase family M23 LCC91_10615 PF08460 Bacterial SH3 domain LCC91_10620 PF03702 Anhydro-N-acetylmuramic acid kinase LCC91_10625 PF01521 Iron-sulphur cluster biosynthesis LCC91_10630 PF00380 Ribosomal protein S9/S16 LCC91_10635 PF00572 Ribosomal protein L13 LCC91_10640 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LCC91_10645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCC91_10645 PF02203 Tar ligand binding domain homologue LCC91_10645 PF00672 HAMP domain LCC91_10650 PF01053 Cys/Met metabolism PLP-dependent enzyme LCC91_10655 PF04754 Putative transposase, YhgA-like LCC91_10660 PF02219 Methylenetetrahydrofolate reductase LCC91_10665 PF01728 FtsJ-like methyltransferase LCC91_10665 PF01479 S4 domain LCC91_10670 PF05221 S-adenosyl-L-homocysteine hydrolase LCC91_10670 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LCC91_10675 PF00348 Polyprenyl synthetase LCC91_10685 PF05985 Ethanolamine ammonia-lyase light chain (EutC) LCC91_10690 PF06751 Ethanolamine ammonia lyase large subunit (EutB) LCC91_10695 PF13520 Amino acid permease LCC91_10700 PF12833 Helix-turn-helix domain LCC91_10715 PF03707 Bacterial signalling protein N terminal repeat LCC91_10715 PF00563 EAL domain LCC91_10715 PF00990 Diguanylate cyclase, GGDEF domain LCC91_10720 PF00578 AhpC/TSA family LCC91_10730 PF01225 Mur ligase family, catalytic domain LCC91_10730 PF02875 Mur ligase family, glutamate ligase domain LCC91_10730 PF08245 Mur ligase middle domain LCC91_10740 PF00793 DAHP synthetase I family LCC91_10745 PF01523 Putative modulator of DNA gyrase LCC91_10750 PF01098 Cell cycle protein LCC91_10755 PF05728 Uncharacterised protein family (UPF0227) LCC91_10760 PF18073 Rubredoxin metal binding domain LCC91_10765 PF02592 Putative vitamin uptake transporter LCC91_10770 PF00773 RNB domain LCC91_10780 PF00912 Transglycosylase LCC91_10785 PF02075 Crossover junction endodeoxyribonuclease RuvC LCC91_10795 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LCC91_10800 PF00091 Tubulin/FtsZ family, GTPase domain LCC91_10800 PF12327 FtsZ family, C-terminal domain LCC91_10805 PF02491 SHS2 domain inserted in FTSA LCC91_10810 PF03799 Cell division protein FtsQ LCC91_10810 PF08478 POTRA domain, FtsQ-type LCC91_10815 PF07478 D-ala D-ala ligase C-terminus LCC91_10815 PF01820 D-ala D-ala ligase N-terminus LCC91_10820 PF01225 Mur ligase family, catalytic domain LCC91_10820 PF02875 Mur ligase family, glutamate ligase domain LCC91_10820 PF08245 Mur ligase middle domain LCC91_10825 PF03033 Glycosyltransferase family 28 N-terminal domain LCC91_10825 PF04101 Glycosyltransferase family 28 C-terminal domain LCC91_10830 PF01098 Cell cycle protein LCC91_10835 PF08245 Mur ligase middle domain LCC91_10835 PF02875 Mur ligase family, glutamate ligase domain LCC91_10840 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LCC91_10840 PF00953 Glycosyl transferase family 4 LCC91_10845 PF02875 Mur ligase family, glutamate ligase domain LCC91_10845 PF08245 Mur ligase middle domain LCC91_10845 PF01225 Mur ligase family, catalytic domain LCC91_10850 PF02875 Mur ligase family, glutamate ligase domain LCC91_10850 PF08245 Mur ligase middle domain LCC91_10855 PF00905 Penicillin binding protein transpeptidase domain LCC91_10855 PF03717 Penicillin-binding Protein dimerisation domain LCC91_10865 PF01795 MraW methylase family LCC91_10870 PF02381 MraZ protein, putative antitoxin-like LCC91_10875 PF00004 ATPase family associated with various cellular activities (AAA) LCC91_10875 PF07724 AAA domain (Cdc48 subfamily) LCC91_10880 PF00227 Proteasome subunit LCC91_10890 PF01258 Prokaryotic dksA/traR C4-type zinc finger LCC91_10895 PF02492 CobW/HypB/UreG, nucleotide-binding domain LCC91_10895 PF07683 Cobalamin synthesis protein cobW C-terminal domain LCC91_10900 PF10672 S-adenosylmethionine-dependent methyltransferase LCC91_10900 PF17785 PUA-like domain LCC91_10910 PF02899 Phage integrase, N-terminal SAM-like domain LCC91_10910 PF00589 Phage integrase family LCC91_10920 PF01678 Diaminopimelate epimerase LCC91_10925 PF04972 BON domain LCC91_10925 PF00691 OmpA family LCC91_10955 PF01435 Peptidase family M48 LCC91_10965 PF00072 Response regulator receiver domain LCC91_10965 PF00486 Transcriptional regulatory protein, C terminal LCC91_10970 PF08521 Two-component sensor kinase N-terminal LCC91_10970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCC91_10970 PF00512 His Kinase A (phospho-acceptor) domain LCC91_10985 PF01970 Tripartite tricarboxylate transporter TctA family LCC91_10990 PF01979 Amidohydrolase family LCC91_10995 PF00005 ABC transporter LCC91_11000 PF00528 Binding-protein-dependent transport system inner membrane component LCC91_11005 PF00528 Binding-protein-dependent transport system inner membrane component LCC91_11010 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCC91_11015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCC91_11015 PF03466 LysR substrate binding domain LCC91_11020 PF00664 ABC transporter transmembrane region LCC91_11020 PF00005 ABC transporter LCC91_11025 PF03061 Thioesterase superfamily LCC91_11030 PF07690 Major Facilitator Superfamily LCC91_11040 PF00753 Metallo-beta-lactamase superfamily LCC91_11050 PF01037 Lrp/AsnC ligand binding domain LCC91_11065 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LCC91_11070 PF01329 Pterin 4 alpha carbinolamine dehydratase LCC91_11075 PF00351 Biopterin-dependent aromatic amino acid hydroxylase LCC91_11080 PF09820 Predicted AAA-ATPase LCC91_11080 PF08011 PD-(D/E)XK nuclease superfamily LCC91_11085 PF13609 Gram-negative porin LCC91_11090 PF13609 Gram-negative porin LCC91_11095 PF13609 Gram-negative porin LCC91_11100 PF03922 OmpW family LCC91_11110 PF00768 D-alanyl-D-alanine carboxypeptidase LCC91_11110 PF07943 Penicillin-binding protein 5, C-terminal domain LCC91_11130 PF03653 Uncharacterised protein family (UPF0093) LCC91_11135 PF01565 FAD binding domain LCC91_11140 PF02754 Cysteine-rich domain LCC91_11140 PF13183 4Fe-4S dicluster domain LCC91_11150 PF03401 Tripartite tricarboxylate transporter family receptor LCC91_11155 PF07690 Major Facilitator Superfamily LCC91_11160 PF00842 Alanine racemase, C-terminal domain LCC91_11160 PF01168 Alanine racemase, N-terminal domain LCC91_11165 PF08011 PD-(D/E)XK nuclease superfamily LCC91_11165 PF09820 Predicted AAA-ATPase LCC91_11170 PF08011 PD-(D/E)XK nuclease superfamily LCC91_11170 PF09820 Predicted AAA-ATPase LCC91_11195 PF00873 AcrB/AcrD/AcrF family LCC91_11215 PF01627 Hpt domain LCC91_11215 PF07194 P2 response regulator binding domain LCC91_11215 PF02895 Signal transducing histidine kinase, homodimeric domain LCC91_11215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCC91_11215 PF01584 CheW-like domain LCC91_11220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCC91_11220 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LCC91_11230 PF00072 Response regulator receiver domain LCC91_11235 PF00072 Response regulator receiver domain LCC91_11240 PF01557 Fumarylacetoacetate (FAA) hydrolase family LCC91_11245 PF00171 Aldehyde dehydrogenase family LCC91_11250 PF00474 Sodium:solute symporter family LCC91_11265 PF10634 Fe2+ transport protein LCC91_11285 PF00210 Ferritin-like domain LCC91_11300 PF01740 STAS domain LCC91_11300 PF00916 Sulfate permease family LCC91_11305 PF01152 Bacterial-like globin LCC91_11310 PF18766 SWI2/SNF2 ATPase LCC91_11310 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LCC91_11310 PF11867 Domain of unknown function (DUF3387) LCC91_11330 PF01909 Nucleotidyltransferase domain LCC91_11335 PF08780 Nucleotidyltransferase substrate binding protein like LCC91_11340 PF13784 Fic/DOC family N-terminal LCC91_11340 PF02661 Fic/DOC family LCC91_11350 PF02384 N-6 DNA Methylase LCC91_11355 PF00436 Single-strand binding protein family LCC91_11360 PF00654 Voltage gated chloride channel LCC91_11365 PF07690 Major Facilitator Superfamily LCC91_11370 PF02203 Tar ligand binding domain homologue LCC91_11370 PF00672 HAMP domain LCC91_11370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCC91_11375 PF00834 Ribulose-phosphate 3 epimerase family LCC91_11385 PF00586 AIR synthase related protein, N-terminal domain LCC91_11385 PF02769 AIR synthase related protein, C-terminal domain LCC91_11395 PF04608 Phosphatidylglycerophosphatase A LCC91_11400 PF02464 Competence-damaged protein LCC91_11400 PF18146 Damage-inducible protein CinA KH domain LCC91_11400 PF00994 Probable molybdopterin binding domain LCC91_11405 PF02810 SEC-C motif LCC91_11405 PF03695 Uncharacterised protein family (UPF0149) LCC91_11410 PF05362 Lon protease (S16) C-terminal proteolytic domain LCC91_11410 PF13654 AAA domain LCC91_11415 PF01867 CRISPR associated protein Cas1 LCC91_11420 PF09827 CRISPR associated protein Cas2 LCC91_11440 PF00557 Metallopeptidase family M24 LCC91_11440 PF05195 Aminopeptidase P, N-terminal domain LCC91_11445 PF00483 Nucleotidyl transferase LCC91_11455 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain LCC91_11455 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain LCC91_11465 PF03466 LysR substrate binding domain LCC91_11465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCC91_11475 PF11871 Domain of unknown function (DUF3391) LCC91_11475 PF01966 HD domain LCC91_11480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCC91_11480 PF00672 HAMP domain LCC91_11485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCC91_11485 PF03466 LysR substrate binding domain LCC91_11490 PF01266 FAD dependent oxidoreductase LCC91_11495 PF01613 Flavin reductase like domain LCC91_11515 PF00860 Permease family LCC91_11525 PF05199 GMC oxidoreductase LCC91_11525 PF00732 GMC oxidoreductase LCC91_11530 PF00171 Aldehyde dehydrogenase family LCC91_11535 PF03466 LysR substrate binding domain LCC91_11535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCC91_11545 PF11455 Protein of unknown function (DUF3018) LCC91_11550 PF08681 Protein of unknown function (DUF1778) LCC91_11580 PF11855 Protein of unknown function (DUF3375) LCC91_11590 PF04221 RelB antitoxin LCC91_11595 PF00814 Glycoprotease family LCC91_11600 PF00583 Acetyltransferase (GNAT) family LCC91_11605 PF03167 Uracil DNA glycosylase superfamily LCC91_11610 PF00005 ABC transporter LCC91_11610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCC91_11615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCC91_11615 PF00005 ABC transporter LCC91_11620 PF00528 Binding-protein-dependent transport system inner membrane component LCC91_11620 PF12911 N-terminal TM domain of oligopeptide transport permease C LCC91_11625 PF00528 Binding-protein-dependent transport system inner membrane component LCC91_11630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCC91_11635 PF00365 Phosphofructokinase LCC91_11640 PF03562 MltA specific insert domain LCC91_11640 PF06725 3D domain LCC91_11645 PF00795 Carbon-nitrogen hydrolase LCC91_11655 PF03710 Glutamate-ammonia ligase adenylyltransferase LCC91_11655 PF08335 GlnD PII-uridylyltransferase LCC91_11660 PF00255 Glutathione peroxidase LCC91_11665 PF00877 NlpC/P60 family LCC91_11670 PF06144 DNA polymerase III, delta subunit LCC91_11670 PF14840 Processivity clamp loader gamma complex DNA pol III C-term LCC91_11675 PF00491 Arginase family LCC91_11680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCC91_11680 PF00672 HAMP domain LCC91_11680 PF02743 Cache domain LCC91_11695 PF09334 tRNA synthetases class I (M) LCC91_11695 PF13603 Leucyl-tRNA synthetase, Domain 2 LCC91_11695 PF00133 tRNA synthetases class I (I, L, M and V) LCC91_11695 PF08264 Anticodon-binding domain of tRNA LCC91_11705 PF00672 HAMP domain LCC91_11705 PF02203 Tar ligand binding domain homologue LCC91_11705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCC91_11710 PF01113 Dihydrodipicolinate reductase, N-terminus LCC91_11710 PF05173 Dihydrodipicolinate reductase, C-terminus LCC91_11715 PF04355 SmpA / OmlA family LCC91_11720 PF01475 Ferric uptake regulator family LCC91_11725 PF07475 HPr Serine kinase C-terminal domain LCC91_11725 PF02603 HPr Serine kinase N terminus LCC91_11730 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LCC91_11735 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LCC91_11750 PF05114 Protein of unknown function (DUF692) LCC91_11770 PF04542 Sigma-70 region 2 LCC91_11770 PF08281 Sigma-70, region 4 LCC91_11785 PF01966 HD domain LCC91_11795 PF01048 Phosphorylase superfamily LCC91_11800 PF01734 Patatin-like phospholipase LCC91_11805 PF01544 CorA-like Mg2+ transporter protein LCC91_11810 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LCC91_11810 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LCC91_11815 PF01048 Phosphorylase superfamily LCC91_11820 PF00501 AMP-binding enzyme LCC91_11820 PF13193 AMP-binding enzyme C-terminal domain LCC91_11830 PF00293 NUDIX domain LCC91_11840 PF02233 NAD(P) transhydrogenase beta subunit LCC91_11845 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LCC91_11850 PF02261 Aspartate decarboxylase LCC91_11855 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LCC91_11855 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LCC91_11865 PF13419 Haloacid dehalogenase-like hydrolase LCC91_11870 PF04452 RNA methyltransferase LCC91_11875 PF01636 Phosphotransferase enzyme family LCC91_11880 PF04453 LPS transport system D LCC91_11885 PF09312 SurA N-terminal domain LCC91_11885 PF00639 PPIC-type PPIASE domain LCC91_11890 PF00398 Ribosomal RNA adenine dimethylase LCC91_11900 PF00545 ribonuclease LCC91_11910 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LCC91_11915 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LCC91_11920 PF03480 Bacterial extracellular solute-binding protein, family 7 LCC91_11925 PF03480 Bacterial extracellular solute-binding protein, family 7 LCC91_11930 PF00512 His Kinase A (phospho-acceptor) domain LCC91_11930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCC91_11930 PF00989 PAS fold LCC91_11940 PF00990 Diguanylate cyclase, GGDEF domain LCC91_11955 PF04011 LemA family LCC91_11960 PF03746 LamB/YcsF family LCC91_11965 PF02626 Carboxyltransferase domain, subdomain A and B LCC91_11970 PF02682 Carboxyltransferase domain, subdomain C and D LCC91_11975 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LCC91_12000 PF01654 Cytochrome bd terminal oxidase subunit I LCC91_12005 PF02322 Cytochrome bd terminal oxidase subunit II LCC91_12015 PF00005 ABC transporter LCC91_12020 PF02687 FtsX-like permease family LCC91_12020 PF12704 MacB-like periplasmic core domain LCC91_12030 PF02515 CoA-transferase family III LCC91_12035 PF02887 Pyruvate kinase, alpha/beta domain LCC91_12035 PF00224 Pyruvate kinase, barrel domain LCC91_12060 PF00474 Sodium:solute symporter family LCC91_12065 PF00311 Phosphoenolpyruvate carboxylase LCC91_12070 PF01116 Fructose-bisphosphate aldolase class-II LCC91_12075 PF01259 SAICAR synthetase LCC91_12080 PF00672 HAMP domain LCC91_12080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCC91_12080 PF00512 His Kinase A (phospho-acceptor) domain LCC91_12085 PF00486 Transcriptional regulatory protein, C terminal LCC91_12085 PF00072 Response regulator receiver domain LCC91_12095 PF00111 2Fe-2S iron-sulfur cluster binding domain LCC91_12100 PF00085 Thioredoxin LCC91_12105 PF00731 AIR carboxylase LCC91_12110 PF02222 ATP-grasp domain LCC91_12110 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LCC91_12115 PF03481 Putative GTP-binding controlling metal-binding LCC91_12115 PF01300 Telomere recombination LCC91_12125 PF03776 Septum formation topological specificity factor MinE LCC91_12130 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LCC91_12135 PF05209 Septum formation inhibitor MinC, N-terminal domain LCC91_12135 PF03775 Septum formation inhibitor MinC, C-terminal domain LCC91_12140 PF00403 Heavy-metal-associated domain LCC91_12145 PF00403 Heavy-metal-associated domain LCC91_12155 PF00202 Aminotransferase class-III LCC91_12170 PF01266 FAD dependent oxidoreductase LCC91_12175 PF00155 Aminotransferase class I and II LCC91_12175 PF00392 Bacterial regulatory proteins, gntR family LCC91_12180 PF07722 Peptidase C26 LCC91_12185 PF00120 Glutamine synthetase, catalytic domain LCC91_12190 PF00202 Aminotransferase class-III LCC91_12195 PF13416 Bacterial extracellular solute-binding protein LCC91_12200 PF00005 ABC transporter LCC91_12200 PF08402 TOBE domain LCC91_12205 PF00528 Binding-protein-dependent transport system inner membrane component LCC91_12210 PF00528 Binding-protein-dependent transport system inner membrane component LCC91_12220 PF00171 Aldehyde dehydrogenase family LCC91_12225 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LCC91_12240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCC91_12240 PF08447 PAS fold LCC91_12245 PF00990 Diguanylate cyclase, GGDEF domain LCC91_12245 PF00563 EAL domain LCC91_12245 PF03707 Bacterial signalling protein N terminal repeat LCC91_12250 PF05598 Transposase domain (DUF772) LCC91_12255 PF00990 Diguanylate cyclase, GGDEF domain LCC91_12255 PF03707 Bacterial signalling protein N terminal repeat LCC91_12255 PF00563 EAL domain LCC91_12260 PF00563 EAL domain LCC91_12260 PF03707 Bacterial signalling protein N terminal repeat LCC91_12260 PF00990 Diguanylate cyclase, GGDEF domain LCC91_12270 PF03692 Putative zinc- or iron-chelating domain LCC91_12275 PF08011 PD-(D/E)XK nuclease superfamily LCC91_12275 PF09820 Predicted AAA-ATPase LCC91_12280 PF13932 GidA associated domain LCC91_12280 PF01134 Glucose inhibited division protein A LCC91_12285 PF02527 rRNA small subunit methyltransferase G LCC91_12290 PF01810 LysE type translocator LCC91_12295 PF13614 AAA domain LCC91_12300 PF17762 HTH domain found in ParB protein LCC91_12300 PF02195 ParB-like nuclease domain LCC91_12310 PF00563 EAL domain LCC91_12310 PF00990 Diguanylate cyclase, GGDEF domain LCC91_12310 PF03707 Bacterial signalling protein N terminal repeat LCC91_12315 PF01565 FAD binding domain LCC91_12315 PF02913 FAD linked oxidases, C-terminal domain LCC91_12320 PF01923 Cobalamin adenosyltransferase LCC91_12325 PF05247 Flagellar transcriptional activator (FlhD) LCC91_12330 PF05280 Flagellar transcriptional activator (FlhC) LCC91_12335 PF07848 PaaX-like protein LCC91_12335 PF08223 PaaX-like protein C-terminal domain LCC91_12340 PF03061 Thioesterase superfamily LCC91_12345 PF00501 AMP-binding enzyme LCC91_12345 PF14535 AMP-binding enzyme C-terminal domain LCC91_12350 PF05138 Phenylacetic acid catabolic protein LCC91_12355 PF06243 Phenylacetic acid degradation B LCC91_12360 PF05138 Phenylacetic acid catabolic protein LCC91_12365 PF01883 Iron-sulfur cluster assembly protein LCC91_12370 PF00111 2Fe-2S iron-sulfur cluster binding domain LCC91_12370 PF00970 Oxidoreductase FAD-binding domain LCC91_12370 PF00175 Oxidoreductase NAD-binding domain LCC91_12385 PF12399 Branched-chain amino acid ATP-binding cassette transporter LCC91_12385 PF00005 ABC transporter LCC91_12390 PF00005 ABC transporter LCC91_12395 PF01575 MaoC like domain LCC91_12395 PF00171 Aldehyde dehydrogenase family LCC91_12400 PF05598 Transposase domain (DUF772) LCC91_12410 PF02803 Thiolase, C-terminal domain LCC91_12410 PF00108 Thiolase, N-terminal domain LCC91_12415 PF01170 Putative RNA methylase family UPF0020 LCC91_12415 PF02926 THUMP domain LCC91_12420 PF04963 Sigma-54 factor, core binding domain LCC91_12420 PF00309 Sigma-54 factor, Activator interacting domain (AID) LCC91_12420 PF04552 Sigma-54, DNA binding domain LCC91_12425 PF00005 ABC transporter LCC91_12425 PF12399 Branched-chain amino acid ATP-binding cassette transporter LCC91_12435 PF00085 Thioredoxin LCC91_12435 PF01323 DSBA-like thioredoxin domain LCC91_12445 PF03485 Arginyl tRNA synthetase N terminal domain LCC91_12445 PF05746 DALR anticodon binding domain LCC91_12445 PF00750 tRNA synthetases class I (R) LCC91_12450 PF00491 Arginase family LCC91_12465 PF03466 LysR substrate binding domain LCC91_12465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCC91_12470 PF00528 Binding-protein-dependent transport system inner membrane component LCC91_12480 PF00005 ABC transporter LCC91_12480 PF08402 TOBE domain LCC91_12485 PF13416 Bacterial extracellular solute-binding protein LCC91_12490 PF01810 LysE type translocator LCC91_12495 PF02027 RolB/RolC glucosidase family LCC91_12495 PF01593 Flavin containing amine oxidoreductase LCC91_12500 PF00795 Carbon-nitrogen hydrolase LCC91_12510 PF01850 PIN domain LCC91_12515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCC91_12515 PF03466 LysR substrate binding domain LCC91_12520 PF01274 Malate synthase LCC91_12525 PF00990 Diguanylate cyclase, GGDEF domain LCC91_12540 PF00490 Delta-aminolevulinic acid dehydratase LCC91_12550 PF00270 DEAD/DEAH box helicase LCC91_12550 PF00271 Helicase conserved C-terminal domain LCC91_12550 PF00570 HRDC domain LCC91_12550 PF16124 RecQ zinc-binding LCC91_12550 PF09382 RQC domain LCC91_12570 PF00210 Ferritin-like domain LCC91_12575 PF00034 Cytochrome c LCC91_12575 PF03150 Di-haem cytochrome c peroxidase LCC91_12610 PF00226 DnaJ domain LCC91_12610 PF01556 DnaJ C terminal domain LCC91_12620 PF00004 ATPase family associated with various cellular activities (AAA) LCC91_12620 PF17862 AAA+ lid domain LCC91_12620 PF01434 Peptidase family M41 LCC91_12625 PF01702 Queuine tRNA-ribosyltransferase LCC91_12640 PF02547 Queuosine biosynthesis protein LCC91_12645 PF01699 Sodium/calcium exchanger protein LCC91_12650 PF00990 Diguanylate cyclase, GGDEF domain LCC91_12655 PF00270 DEAD/DEAH box helicase LCC91_12655 PF17191 RecG wedge domain LCC91_12655 PF00271 Helicase conserved C-terminal domain LCC91_12660 PF03466 LysR substrate binding domain LCC91_12660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCC91_12665 PF01040 UbiA prenyltransferase family LCC91_12670 PF03807 NADP oxidoreductase coenzyme F420-dependent LCC91_12670 PF14748 Pyrroline-5-carboxylate reductase dimerisation LCC91_12675 PF01235 Sodium:alanine symporter family LCC91_12680 PF00238 Ribosomal protein L14p/L23e LCC91_12685 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LCC91_12690 PF00281 Ribosomal protein L5 LCC91_12690 PF00673 ribosomal L5P family C-terminus LCC91_12695 PF00253 Ribosomal protein S14p/S29e LCC91_12700 PF00410 Ribosomal protein S8 LCC91_12705 PF00347 Ribosomal protein L6 LCC91_12710 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LCC91_12715 PF00333 Ribosomal protein S5, N-terminal domain LCC91_12715 PF03719 Ribosomal protein S5, C-terminal domain LCC91_12720 PF00327 Ribosomal protein L30p/L7e LCC91_12725 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LCC91_12730 PF00344 SecY translocase LCC91_12735 PF01176 Translation initiation factor 1A / IF-1 LCC91_12740 PF00444 Ribosomal protein L36 LCC91_12745 PF00416 Ribosomal protein S13/S18 LCC91_12750 PF00411 Ribosomal protein S11 LCC91_12755 PF01479 S4 domain LCC91_12755 PF00163 Ribosomal protein S4/S9 N-terminal domain LCC91_12760 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LCC91_12760 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LCC91_12760 PF01000 RNA polymerase Rpb3/RpoA insert domain LCC91_12765 PF01196 Ribosomal protein L17 LCC91_12775 PF02515 CoA-transferase family III LCC91_12780 PF01451 Low molecular weight phosphotyrosine protein phosphatase LCC91_12785 PF01547 Bacterial extracellular solute-binding protein LCC91_12790 PF00528 Binding-protein-dependent transport system inner membrane component LCC91_12795 PF00528 Binding-protein-dependent transport system inner membrane component LCC91_12800 PF08402 TOBE domain LCC91_12800 PF00005 ABC transporter LCC91_12805 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LCC91_12805 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LCC91_12810 PF02685 Glucokinase LCC91_12815 PF01418 Helix-turn-helix domain, rpiR family LCC91_12815 PF01380 SIS domain LCC91_12820 PF00342 Phosphoglucose isomerase LCC91_12825 PF01081 KDPG and KHG aldolase LCC91_12830 PF00920 Dehydratase family LCC91_12835 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LCC91_12840 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LCC91_12840 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LCC91_12845 PF00294 pfkB family carbohydrate kinase LCC91_12850 PF13407 Periplasmic binding protein domain LCC91_12855 PF02653 Branched-chain amino acid transport system / permease component LCC91_12860 PF00005 ABC transporter LCC91_12870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCC91_12870 PF00512 His Kinase A (phospho-acceptor) domain LCC91_12875 PF00486 Transcriptional regulatory protein, C terminal LCC91_12875 PF00072 Response regulator receiver domain LCC91_12880 PF01914 MarC family integral membrane protein LCC91_12890 PF00892 EamA-like transporter family LCC91_12895 PF02699 Preprotein translocase subunit LCC91_12900 PF07549 SecD/SecF GG Motif LCC91_12900 PF13721 SecD export protein N-terminal TM region LCC91_12900 PF02355 Protein export membrane protein LCC91_12905 PF07549 SecD/SecF GG Motif LCC91_12905 PF02355 Protein export membrane protein LCC91_12910 PF02481 DNA recombination-mediator protein A LCC91_12910 PF17782 DprA winged helix domain LCC91_12920 PF01327 Polypeptide deformylase LCC91_12925 PF02911 Formyl transferase, C-terminal domain LCC91_12925 PF00551 Formyl transferase LCC91_12940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCC91_12940 PF00512 His Kinase A (phospho-acceptor) domain LCC91_12940 PF01627 Hpt domain LCC91_12940 PF00072 Response regulator receiver domain LCC91_12950 PF00580 UvrD/REP helicase N-terminal domain LCC91_12950 PF13361 UvrD-like helicase C-terminal domain LCC91_12960 PF00271 Helicase conserved C-terminal domain LCC91_12960 PF17764 3′ DNA-binding domain (3′BD) LCC91_12960 PF00270 DEAD/DEAH box helicase LCC91_12960 PF18074 Primosomal protein N C-terminal domain LCC91_12960 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LCC91_12965 PF01208 Uroporphyrinogen decarboxylase (URO-D) LCC91_12970 PF02683 Cytochrome C biogenesis protein transmembrane region LCC91_12970 PF00085 Thioredoxin LCC91_12970 PF11412 Disulphide bond corrector protein DsbC LCC91_12980 PF02633 Creatinine amidohydrolase LCC91_12995 PF12848 ABC transporter LCC91_12995 PF00005 ABC transporter LCC91_12995 PF16326 ABC transporter C-terminal domain LCC91_13075 PF00809 Pterin binding enzyme LCC91_13075 PF02965 Vitamin B12 dependent methionine synthase, activation domain LCC91_13075 PF02607 B12 binding domain LCC91_13075 PF02310 B12 binding domain LCC91_13075 PF02574 Homocysteine S-methyltransferase LCC91_13080 PF00990 Diguanylate cyclase, GGDEF domain LCC91_13085 PF10609 NUBPL iron-transfer P-loop NTPase LCC91_13095 PF03401 Tripartite tricarboxylate transporter family receptor LCC91_13100 PF02705 K+ potassium transporter LCC91_13110 PF00005 ABC transporter LCC91_13125 PF02653 Branched-chain amino acid transport system / permease component LCC91_13130 PF00005 ABC transporter LCC91_13130 PF12399 Branched-chain amino acid ATP-binding cassette transporter LCC91_13135 PF00501 AMP-binding enzyme LCC91_13140 PF13545 Crp-like helix-turn-helix domain LCC91_13140 PF00027 Cyclic nucleotide-binding domain LCC91_13145 PF00183 Hsp90 protein LCC91_13145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCC91_13150 PF02566 OsmC-like protein LCC91_13155 PF01047 MarR family LCC91_13160 PF02308 MgtC family LCC91_13180 PF04107 Glutamate-cysteine ligase family 2(GCS2) LCC91_13190 PF01061 ABC-2 type transporter LCC91_13195 PF00005 ABC transporter LCC91_13215 PF02666 Phosphatidylserine decarboxylase LCC91_13220 PF01048 Phosphorylase superfamily LCC91_13220 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus LCC91_13225 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCC91_13225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LCC91_13230 PF17755 UvrA DNA-binding domain LCC91_13230 PF17760 UvrA interaction domain LCC91_13235 PF04715 Anthranilate synthase component I, N terminal region LCC91_13235 PF00425 chorismate binding enzyme LCC91_13240 PF00117 Glutamine amidotransferase class-I LCC91_13245 PF02885 Glycosyl transferase family, helical bundle domain LCC91_13245 PF00591 Glycosyl transferase family, a/b domain LCC91_13250 PF00218 Indole-3-glycerol phosphate synthase LCC91_13275 PF03143 Elongation factor Tu C-terminal domain LCC91_13275 PF03144 Elongation factor Tu domain 2 LCC91_13275 PF00009 Elongation factor Tu GTP binding domain LCC91_13290 PF02357 Transcription termination factor nusG LCC91_13290 PF00467 KOW motif LCC91_13295 PF03946 Ribosomal protein L11, N-terminal domain LCC91_13295 PF00298 Ribosomal protein L11, RNA binding domain LCC91_13300 PF00687 Ribosomal protein L1p/L10e family LCC91_13305 PF00466 Ribosomal protein L10 LCC91_13310 PF16320 Ribosomal protein L7/L12 dimerisation domain LCC91_13310 PF00542 Ribosomal protein L7/L12 C-terminal domain LCC91_13315 PF00562 RNA polymerase Rpb2, domain 6 LCC91_13315 PF10385 RNA polymerase beta subunit external 1 domain LCC91_13315 PF04561 RNA polymerase Rpb2, domain 2 LCC91_13315 PF04565 RNA polymerase Rpb2, domain 3 LCC91_13315 PF04563 RNA polymerase beta subunit LCC91_13315 PF04560 RNA polymerase Rpb2, domain 7 LCC91_13320 PF04998 RNA polymerase Rpb1, domain 5 LCC91_13320 PF05000 RNA polymerase Rpb1, domain 4 LCC91_13320 PF04983 RNA polymerase Rpb1, domain 3 LCC91_13320 PF04997 RNA polymerase Rpb1, domain 1 LCC91_13320 PF00623 RNA polymerase Rpb1, domain 2 LCC91_13325 PF04011 LemA family LCC91_13330 PF01435 Peptidase family M48 LCC91_13335 PF01029 NusB family LCC91_13335 PF01189 16S rRNA methyltransferase RsmB/F LCC91_13345 PF00989 PAS fold LCC91_13345 PF00512 His Kinase A (phospho-acceptor) domain LCC91_13345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCC91_13345 PF00672 HAMP domain LCC91_13350 PF00072 Response regulator receiver domain LCC91_13350 PF02954 Bacterial regulatory protein, Fis family LCC91_13350 PF00158 Sigma-54 interaction domain LCC91_13385 PF02796 Helix-turn-helix domain of resolvase LCC91_13385 PF00239 Resolvase, N terminal domain LCC91_13415 PF05598 Transposase domain (DUF772) LCC91_13425 PF05598 Transposase domain (DUF772) LCC91_13455 PF00672 HAMP domain LCC91_13455 PF00512 His Kinase A (phospho-acceptor) domain LCC91_13455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCC91_13460 PF00072 Response regulator receiver domain LCC91_13460 PF00486 Transcriptional regulatory protein, C terminal LCC91_13465 PF05598 Transposase domain (DUF772) LCC91_13470 PF00394 Multicopper oxidase LCC91_13470 PF07732 Multicopper oxidase LCC91_13470 PF07731 Multicopper oxidase LCC91_13475 PF05275 Copper resistance protein B precursor (CopB) LCC91_13505 PF11525 Copper resistance protein K LCC91_13510 PF00561 alpha/beta hydrolase fold LCC91_13525 PF03372 Endonuclease/Exonuclease/phosphatase family LCC91_13530 PF00164 Ribosomal protein S12/S23 LCC91_13535 PF00177 Ribosomal protein S7p/S5e LCC91_13540 PF14492 Elongation Factor G, domain II LCC91_13540 PF03144 Elongation factor Tu domain 2 LCC91_13540 PF00009 Elongation factor Tu GTP binding domain LCC91_13540 PF03764 Elongation factor G, domain IV LCC91_13540 PF00679 Elongation factor G C-terminus LCC91_13545 PF03144 Elongation factor Tu domain 2 LCC91_13545 PF03143 Elongation factor Tu C-terminal domain LCC91_13545 PF00009 Elongation factor Tu GTP binding domain LCC91_13550 PF00338 Ribosomal protein S10p/S20e LCC91_13555 PF00297 Ribosomal protein L3 LCC91_13560 PF00573 Ribosomal protein L4/L1 family LCC91_13565 PF00276 Ribosomal protein L23 LCC91_13570 PF00181 Ribosomal Proteins L2, RNA binding domain LCC91_13570 PF03947 Ribosomal Proteins L2, C-terminal domain LCC91_13575 PF00203 Ribosomal protein S19 LCC91_13580 PF00237 Ribosomal protein L22p/L17e LCC91_13585 PF00189 Ribosomal protein S3, C-terminal domain LCC91_13585 PF07650 KH domain LCC91_13590 PF00252 Ribosomal protein L16p/L10e LCC91_13595 PF00831 Ribosomal L29 protein LCC91_13600 PF00366 Ribosomal protein S17 LCC91_13605 PF08534 Redoxin LCC91_13625 PF01292 Prokaryotic cytochrome b561 LCC91_13630 PF01322 Cytochrome C' LCC91_13635 PF00578 AhpC/TSA family LCC91_13640 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LCC91_13640 PF00072 Response regulator receiver domain LCC91_13640 PF01627 Hpt domain LCC91_13640 PF00512 His Kinase A (phospho-acceptor) domain LCC91_13640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCC91_13640 PF00672 HAMP domain LCC91_13645 PF00672 HAMP domain LCC91_13645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCC91_13645 PF00512 His Kinase A (phospho-acceptor) domain LCC91_13645 PF01627 Hpt domain LCC91_13645 PF00072 Response regulator receiver domain LCC91_13645 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LCC91_13650 PF00990 Diguanylate cyclase, GGDEF domain LCC91_13650 PF00360 Phytochrome region LCC91_13650 PF01590 GAF domain LCC91_13650 PF00563 EAL domain LCC91_13670 PF00381 PTS HPr component phosphorylation site LCC91_13675 PF00391 PEP-utilising enzyme, mobile domain LCC91_13675 PF05524 PEP-utilising enzyme, N-terminal LCC91_13675 PF02896 PEP-utilising enzyme, TIM barrel domain LCC91_13680 PF01850 PIN domain LCC91_13690 PF16473 3' exoribonuclease, RNase T-like LCC91_13705 PF00120 Glutamine synthetase, catalytic domain LCC91_13710 PF00291 Pyridoxal-phosphate dependent enzyme LCC91_13710 PF13291 ACT domain LCC91_13725 PF04675 DNA ligase N terminus LCC91_13725 PF01068 ATP dependent DNA ligase domain LCC91_13725 PF04679 ATP dependent DNA ligase C terminal region LCC91_13730 PF04679 ATP dependent DNA ligase C terminal region LCC91_13730 PF04675 DNA ligase N terminus LCC91_13730 PF01068 ATP dependent DNA ligase domain LCC91_13735 PF00270 DEAD/DEAH box helicase LCC91_13735 PF08494 DEAD/H associated LCC91_13735 PF00271 Helicase conserved C-terminal domain LCC91_13750 PF03099 Biotin/lipoate A/B protein ligase family LCC91_13750 PF02237 Biotin protein ligase C terminal domain LCC91_13755 PF01751 Toprim domain LCC91_13755 PF01131 DNA topoisomerase LCC91_13760 PF02798 Glutathione S-transferase, N-terminal domain LCC91_13760 PF00043 Glutathione S-transferase, C-terminal domain LCC91_13765 PF08521 Two-component sensor kinase N-terminal LCC91_13765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCC91_13765 PF00512 His Kinase A (phospho-acceptor) domain LCC91_13770 PF00072 Response regulator receiver domain LCC91_13770 PF00486 Transcriptional regulatory protein, C terminal LCC91_13780 PF00154 recA bacterial DNA recombination protein LCC91_13785 PF02631 RecX family LCC91_13790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LCC91_13790 PF08447 PAS fold LCC91_13795 PF00155 Aminotransferase class I and II LCC91_13800 PF01926 50S ribosome-binding GTPase LCC91_13800 PF12631 MnmE helical domain LCC91_13800 PF10396 GTP-binding protein TrmE N-terminus LCC91_13805 PF02096 60Kd inner membrane protein LCC91_13805 PF14849 YidC periplasmic domain LCC91_13810 PF01809 Putative membrane protein insertion efficiency factor LCC91_13820 PF00468 Ribosomal protein L34