locus-tag	class	description
TERTU_0002	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
TERTU_0003	COG0592	DNA-directed DNA polymerase activity
TERTU_0004	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
TERTU_0018	COG1280	lysine exporter protein (LysE YggA)
TERTU_0022	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
TERTU_0025	COG0204	Acyl-transferase
TERTU_0026	COG0751	glycine-tRNA ligase activity
TERTU_0027	COG0752	glycyl-tRNA synthetase alpha subunit
TERTU_0033	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
TERTU_0034	COG0569	domain protein
TERTU_0036	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
TERTU_0037	COG0242	peptide deformylase activity
TERTU_0038	COG1652	LysM domain
TERTU_0039	COG0758	DNA mediated transformation
TERTU_0040	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
TERTU_0041	COG0009	L-threonylcarbamoyladenylate synthase
TERTU_0042	COG0408	coproporphyrinogen oxidase activity
TERTU_0043	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
TERTU_0047	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
TERTU_0049	COG2010	Cytochrome c
TERTU_0051	COG1108	ABC-type Mn2 Zn2 transport systems permease components
TERTU_0052	COG1121	(ABC) transporter
TERTU_0053	COG0735	belongs to the Fur family
TERTU_0054	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
TERTU_0070	COG2824	Alkylphosphonate utilization operon protein PhnA
TERTU_0077	COG0534	Mate efflux family protein
TERTU_0078	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
TERTU_0079	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
TERTU_0080	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
TERTU_0081	COG1845	cytochrome c oxidase, subunit III
TERTU_0083	COG3346	SURF1 family
TERTU_0085	COG1612	heme a metabolic process
TERTU_0086	COG0109	protoheme IX farnesyltransferase activity
TERTU_0100	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
TERTU_0101	COG2205	protein histidine kinase activity
TERTU_0101	COG2198	Histidine kinase
TERTU_0101	COG0784	Response regulator, receiver
TERTU_0103	COG4948	Mandelate Racemase Muconate Lactonizing
TERTU_0105	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
TERTU_0111	COG1312	Catalyzes the dehydration of D-mannonate
TERTU_0122	COG2169	Transcriptional regulator
TERTU_0122	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
TERTU_0126	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
TERTU_0128	COG2119	membrane
TERTU_0131	COG5001	Diguanylate cyclase
TERTU_0131	COG5002	protein histidine kinase activity
TERTU_0132	COG2198	Histidine kinase
TERTU_0132	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
TERTU_0132	COG0784	Response regulator, receiver
TERTU_0132	COG2205	protein histidine kinase activity
TERTU_0147	COG0668	transmembrane transport
TERTU_0149	COG4124	Belongs to the glycosyl hydrolase 26 family
TERTU_0152	COG0596	Alpha beta hydrolase
TERTU_0162	COG0583	DNA-binding transcription factor activity
TERTU_0163	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
TERTU_0166	COG1478	Catalyzes the GTP-dependent successive addition of multiple gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives
TERTU_0166	COG0778	Nitroreductase
TERTU_0169	COG2045	Belongs to the ComB family
TERTU_0170	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
TERTU_0172	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
TERTU_0173	COG1758	RNA polymerase activity
TERTU_0174	COG0194	GDP metabolic process
TERTU_0175	COG1561	YicC-like family, N-terminal region
TERTU_0176	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
TERTU_0178	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
TERTU_0180	COG0267	Belongs to the bacterial ribosomal protein bL33 family
TERTU_0181	COG0227	Belongs to the bacterial ribosomal protein bL28 family
TERTU_0184	COG2003	Belongs to the UPF0758 family
TERTU_0185	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
TERTU_0187	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
TERTU_0188	COG1309	transcriptional regulator
TERTU_0190	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
TERTU_0192	COG0708	Exodeoxyribonuclease III
TERTU_0193	COG0165	Argininosuccinate lyase
TERTU_0194	COG3275	phosphorelay sensor kinase activity
TERTU_0197	COG0181	hydroxymethylbilane synthase activity
TERTU_0198	COG1587	Uroporphyrinogen-III synthase
TERTU_0199	COG2959	enzyme of heme biosynthesis
TERTU_0201	COG1028	Short-chain dehydrogenase reductase Sdr
TERTU_0208	COG3706	GGDEF domain
TERTU_0209	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
TERTU_0214	COG0635	Involved in the biosynthesis of porphyrin-containing compound
TERTU_0216	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
TERTU_0218	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
TERTU_0218	COG2813	Specifically methylates the guanine in position
TERTU_0219	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
TERTU_0220	COG1872	DUF167
TERTU_0227	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
TERTU_0228	COG1678	Uncharacterized ACR, COG1678
TERTU_0233	COG0835	chemotaxis
TERTU_0236	COG0643	Histidine kinase
TERTU_0236	COG2198	Histidine kinase
TERTU_0239	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
TERTU_0240	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
TERTU_0241	COG1011	Hydrolase
TERTU_0242	COG0494	nUDIX hydrolase
TERTU_0243	COG1218	3'(2'),5'-bisphosphate nucleotidase
TERTU_0246	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
TERTU_0247	COG0742	ribosomal rna small subunit methyltransferase
TERTU_0248	COG0552	protein localization to endoplasmic reticulum
TERTU_0249	COG2884	Cell division ATP-binding protein ftsE
TERTU_0250	COG2177	Part of the ABC transporter FtsEX involved in
TERTU_0252	COG2363	Small membrane protein
TERTU_0253	COG0220	tRNA (guanine-N7-)-methyltransferase activity
TERTU_0261	COG2918	glutathione biosynthetic process
TERTU_0264	COG3031	protein transport across the cell outer membrane
TERTU_0266	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
TERTU_0293	COG5001	Diguanylate cyclase
TERTU_0293	COG3706	GGDEF domain
TERTU_0293	COG2203	Gaf domain
TERTU_0293	COG4251	negative regulation of phosphorylation
TERTU_0300	COG4302	ethanolamine ammonia-lyase activity
TERTU_0301	COG4303	Ethanolamine ammonia lyase large subunit
TERTU_0308	COG1733	regulation of RNA biosynthetic process
TERTU_0309	COG0446	pyridine nucleotide-disulphide oxidoreductase
TERTU_0309	COG1902	pentaerythritol trinitrate reductase activity
TERTU_0314	COG0126	phosphoglycerate kinase activity
TERTU_0316	COG0737	Belongs to the 5'-nucleotidase family
TERTU_0321	COG1294	oxidase, subunit
TERTU_0322	COG1271	oxidase subunit
TERTU_0331	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
TERTU_0341	COG1741	Belongs to the pirin family
TERTU_0342	COG0431	NADPH-dependent FMN reductase
TERTU_0344	COG1397	ADP-ribosylglycohydrolase
TERTU_0350	COG0534	Mate efflux family protein
TERTU_0351	COG2249	NAD(P)H dehydrogenase (quinone) activity
TERTU_0352	COG0039	L-malate dehydrogenase activity
TERTU_0354	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
TERTU_0356	COG0404	The glycine cleavage system catalyzes the degradation of glycine
TERTU_0357	COG0509	glycine decarboxylation via glycine cleavage system
TERTU_0362	COG1051	belongs to the nudix hydrolase family
TERTU_0364	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
TERTU_0365	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
TERTU_0369	COG0811	peptide transport
TERTU_0370	COG0811	peptide transport
TERTU_0371	COG0848	biopolymer transport protein
TERTU_0374	COG0129	dihydroxy-acid dehydratase activity
TERTU_0377	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
TERTU_0377	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
TERTU_0378	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
TERTU_0382	COG1882	Formate acetyltransferase
TERTU_0384	COG0668	transmembrane transport
TERTU_0386	COG0477	Major facilitator Superfamily
TERTU_0391	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
TERTU_0392	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
TERTU_0393	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
TERTU_0397	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
TERTU_0402	COG0006	proline dipeptidase activity
TERTU_0403	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
TERTU_0404	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
TERTU_0405	COG2995	paraquat-inducible protein a
TERTU_0406	COG3008	intermembrane lipid transfer
TERTU_0406	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
TERTU_0417	COG0131	Imidazoleglycerol-phosphate dehydratase
TERTU_0418	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
TERTU_0419	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
TERTU_0420	COG0107	imidazoleglycerol-phosphate synthase activity
TERTU_0421	COG0306	phosphate transporter
TERTU_0422	COG1392	Phosphate transport regulator
TERTU_0427	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
TERTU_0428	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
TERTU_0434	COG3132	Protein of unknown function, DUF480
TERTU_0436	COG1132	(ABC) transporter
TERTU_0445	COG0386	Belongs to the glutathione peroxidase family
TERTU_0446	COG3509	depolymerase
TERTU_0453	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
TERTU_0454	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
TERTU_0455	COG0471	metal ion transport
TERTU_0455	COG3273	potassium ion transport
TERTU_0458	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
TERTU_0460	COG2382	esterase
TERTU_0469	COG0460	homoserine dehydrogenase
TERTU_0469	COG0527	aspartate kinase activity
TERTU_0470	COG3604	Transcriptional regulator
TERTU_0481	COG0358	DNA primase activity
TERTU_0482	COG0625	glutathione transferase activity
TERTU_0484	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
TERTU_0485	COG2315	Protein conserved in bacteria
TERTU_0486	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
TERTU_0489	COG1040	competence protein
TERTU_0490	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
TERTU_0491	COG0156	8-amino-7-oxononanoate synthase activity
TERTU_0492	COG0596	Alpha beta hydrolase
TERTU_0492	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
TERTU_0492	COG2226	methyltransferase
TERTU_0493	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
TERTU_0498	COG1960	acyl-CoA dehydrogenase activity
TERTU_0514	COG0745	RESPONSE REGULATOR receiver
TERTU_0514	COG3706	GGDEF domain
TERTU_0515	COG3706	GGDEF domain
TERTU_0515	COG0745	RESPONSE REGULATOR receiver
TERTU_0521	COG1596	polysaccharide export
TERTU_0521	COG1555	photosystem II stabilization
TERTU_0546	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
TERTU_0547	COG0360	Binds together with S18 to 16S ribosomal RNA
TERTU_0548	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
TERTU_0550	COG0359	binds to the 23S rRNA
TERTU_0552	COG0305	Participates in initiation and elongation during chromosome replication
TERTU_0555	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
TERTU_0556	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
TERTU_0557	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
TERTU_0559	COG1611	Belongs to the LOG family
TERTU_0564	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
TERTU_0565	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
TERTU_0567	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
TERTU_0568	COG1428	Deoxynucleoside kinase
TERTU_0569	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
TERTU_0570	COG0617	tRNA 3'-terminal CCA addition
TERTU_0572	COG4191	Histidine kinase
TERTU_0575	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
TERTU_0577	COG1489	DNA binding
TERTU_0583	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
TERTU_0585	COG2205	protein histidine kinase activity
TERTU_0585	COG3437	response regulator, receiver
TERTU_0585	COG3850	Histidine kinase
TERTU_0585	COG4999	Histidine kinase
TERTU_0587	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
TERTU_0592	COG2205	protein histidine kinase activity
TERTU_0593	COG0745	RESPONSE REGULATOR receiver
TERTU_0600	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
TERTU_0602	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
TERTU_0603	COG0768	penicillin binding
TERTU_0604	COG0772	Belongs to the SEDS family
TERTU_0605	COG2951	lytic endotransglycosylase activity
TERTU_0607	COG3291	Pkd domain containing protein
TERTU_0608	COG1686	Belongs to the peptidase S11 family
TERTU_0609	COG2921	Belongs to the UPF0250 family
TERTU_0610	COG0321	lipoyl(octanoyl) transferase activity
TERTU_0611	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
TERTU_0613	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
TERTU_0614	COG5001	Diguanylate cyclase
TERTU_0614	COG3706	GGDEF domain
TERTU_0614	COG2203	Gaf domain
TERTU_0614	COG4251	negative regulation of phosphorylation
TERTU_0621	COG1042	CoA-binding domain protein
TERTU_0621	COG0045	succinate-CoA ligase (ADP-forming) activity
TERTU_0621	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
TERTU_0623	COG2169	Transcriptional regulator
TERTU_0623	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
TERTU_0626	COG0471	metal ion transport
TERTU_0631	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
TERTU_0635	COG0205	6-phosphofructokinase activity
TERTU_0640	COG1560	Kdo2-lipid A biosynthetic process
TERTU_0641	COG2205	protein histidine kinase activity
TERTU_0641	COG2198	Histidine kinase
TERTU_0641	COG0784	Response regulator, receiver
TERTU_0643	COG1643	Atp-dependent helicase
TERTU_0645	COG4447	cellulose binding
TERTU_0645	COG3291	Pkd domain containing protein
TERTU_0645	COG5520	Belongs to the glycosyl hydrolase 30 family
TERTU_0647	COG0514	ATP-dependent DNA helicase (RecQ)
TERTU_0648	COG4989	oxidoreductase activity
TERTU_0651	COG1047	Peptidyl-prolyl cis-trans
TERTU_0654	COG0534	Mate efflux family protein
TERTU_0657	COG1649	PFAM Uncharacterised BCR, COG1649
TERTU_0657	COG0726	polysaccharide deacetylase
TERTU_0659	COG1785	Belongs to the alkaline phosphatase family
TERTU_0663	COG3830	Belongs to the UPF0237 family
TERTU_0663	COG0560	Phosphoserine phosphatase
TERTU_0666	COG1509	lysine 2,3-aminomutase activity
TERTU_0667	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
TERTU_0669	COG1045	serine acetyltransferase
TERTU_0672	COG1802	Transcriptional regulator
TERTU_0676	COG3250	beta-galactosidase activity
TERTU_0678	COG3380	Catalyzes the oxidation of the 1,2-dihydro- and 1,6- dihydro- isomeric forms of beta-NAD(P) back to beta-NAD(P) . May serve to protect primary metabolism dehydrogenases from inhibition by the 1,2-dihydro- and 1,6-dihydro-beta-NAD(P) isomers
TERTU_0679	COG0415	Belongs to the DNA photolyase family
TERTU_0682	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
TERTU_0684	COG0739	heme binding
TERTU_0685	COG3706	GGDEF domain
TERTU_0686	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
TERTU_0694	COG1216	Glycosyl transferase, family 2
TERTU_0697	COG1560	Kdo2-lipid A biosynthetic process
TERTU_0700	COG0859	PFAM glycosyl transferase family 9
TERTU_0705	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
TERTU_0707	COG0628	permease
TERTU_0710	COG0745	RESPONSE REGULATOR receiver
TERTU_0714	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
TERTU_0714	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
TERTU_0718	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
TERTU_0721	COG0848	biopolymer transport protein
TERTU_0724	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
TERTU_0724	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
TERTU_0726	COG0494	nUDIX hydrolase
TERTU_0727	COG3706	GGDEF domain
TERTU_0729	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
TERTU_0733	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
TERTU_0734	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
TERTU_0735	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
TERTU_0737	COG2205	protein histidine kinase activity
TERTU_0738	COG0784	Response regulator, receiver
TERTU_0744	COG2308	Evidence 4 Homologs of previously reported genes of
TERTU_0744	COG2307	Protein conserved in bacteria
TERTU_0749	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
TERTU_0759	COG0067	glutamate synthase
TERTU_0759	COG0070	glutamate synthase
TERTU_0759	COG0069	glutamate synthase activity
TERTU_0760	COG0493	'glutamate synthase
TERTU_0763	COG5520	Belongs to the glycosyl hydrolase 30 family
TERTU_0764	COG4977	sequence-specific DNA binding
TERTU_0767	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
TERTU_0771	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
TERTU_0772	COG0084	hydrolase, TatD family'
TERTU_0773	COG0069	glutamate synthase activity
TERTU_0774	COG0069	glutamate synthase activity
TERTU_0775	COG2373	Large extracellular alpha-helical protein
TERTU_0776	COG4953	penicillin-binding protein 1C
TERTU_0778	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
TERTU_0779	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
TERTU_0797	COG0840	transmembrane signaling receptor activity
TERTU_0798	COG0450	alkyl hydroperoxide reductase
TERTU_0799	COG3634	alkyl hydroperoxide reductase activity
TERTU_0802	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
TERTU_0810	COG2971	BadF BadG BcrA BcrD
TERTU_0811	COG3525	Glycosyl hydrolase, family 20, catalytic domain
TERTU_0814	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
TERTU_0815	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
TERTU_0816	COG1609	Transcriptional regulator
TERTU_0819	COG2311	Membrane
TERTU_0820	COG0123	including yeast histone deacetylase and acetoin utilization protein
TERTU_0823	COG1074	ATP-dependent DNA helicase activity
TERTU_0824	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
TERTU_0824	COG4191	Histidine kinase
TERTU_0827	COG2308	Evidence 4 Homologs of previously reported genes of
TERTU_0829	COG1858	cytochrome C peroxidase
TERTU_0834	COG1730	sister chromatid segregation
TERTU_0835	COG3693	PFAM glycoside hydrolase, family 10
TERTU_0837	COG5002	protein histidine kinase activity
TERTU_0838	COG0745	RESPONSE REGULATOR receiver
TERTU_0843	COG0515	serine threonine protein kinase
TERTU_0843	COG2815	serine threonine protein kinase
TERTU_0845	COG2906	2 iron, 2 sulfur cluster binding
TERTU_0846	COG0450	alkyl hydroperoxide reductase
TERTU_0848	COG3265	gluconokinase activity
TERTU_0849	COG1609	Transcriptional regulator
TERTU_0850	COG2211	Major facilitator Superfamily
TERTU_0851	COG3459	Glycosyltransferase 36 associated
TERTU_0854	COG0463	Glycosyl transferase, family 2
TERTU_0858	COG0442	prolyl-tRNA aminoacylation
TERTU_0863	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
TERTU_0864	COG0217	transcriptional regulatory protein
TERTU_0865	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
TERTU_0866	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
TERTU_0866	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
TERTU_0867	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
TERTU_0878	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
TERTU_0879	COG0081	regulation of translation
TERTU_0881	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
TERTU_0882	COG0222	ribosome binding
TERTU_0883	COG0085	RNA polymerase activity
TERTU_0884	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
TERTU_0886	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
TERTU_0887	COG0049	tRNA binding
TERTU_0888	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
TERTU_0889	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
TERTU_0892	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
TERTU_0895	COG2186	Transcriptional regulator
TERTU_0896	COG0800	Aldolase
TERTU_0897	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
TERTU_0898	COG1904	glucuronate isomerase
TERTU_0899	COG0246	Mannitol dehydrogenase
TERTU_0900	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
TERTU_0901	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
TERTU_0902	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
TERTU_0907	COG0051	transcription antitermination factor activity, RNA binding
TERTU_0908	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
TERTU_0909	COG0088	Forms part of the polypeptide exit tunnel
TERTU_0910	COG0089	rRNA binding
TERTU_0911	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
TERTU_0912	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
TERTU_0913	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
TERTU_0914	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
TERTU_0915	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
TERTU_0916	COG0255	Belongs to the universal ribosomal protein uL29 family
TERTU_0917	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
TERTU_0918	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
TERTU_0919	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
TERTU_0920	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
TERTU_0921	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
TERTU_0922	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
TERTU_0923	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
TERTU_0924	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
TERTU_0925	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
TERTU_0926	COG1841	ribosomal large subunit assembly
TERTU_0927	COG0200	Binds to the 23S rRNA
TERTU_0930	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
TERTU_0931	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
TERTU_0932	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
TERTU_0933	COG0202	RNA polymerase activity
TERTU_0934	COG0203	ribosomal protein L17
TERTU_0935	COG1640	4-alpha-glucanotransferase
TERTU_0936	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
TERTU_0938	COG0058	SHG alpha-glucan phosphorylase activity
TERTU_0939	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
TERTU_0940	COG0297	glycogen (starch) synthase activity
TERTU_0943	COG2197	response regulator
TERTU_0944	COG2814	Major facilitator Superfamily
TERTU_0945	COG0629	single-stranded DNA binding
TERTU_0948	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
TERTU_0955	COG3220	belongs to the UPF0276 family
TERTU_0957	COG0166	Belongs to the GPI family
TERTU_0958	COG0142	geranyltranstransferase activity
TERTU_0960	COG0261	This protein binds to 23S rRNA in the presence of protein L20
TERTU_0961	COG0211	Belongs to the bacterial ribosomal protein bL27 family
TERTU_0962	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
TERTU_0963	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
TERTU_0964	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
TERTU_0965	COG0268	Binds directly to 16S ribosomal RNA
TERTU_0967	COG0745	RESPONSE REGULATOR receiver
TERTU_0968	COG2703	oxygen carrier activity
TERTU_0969	COG2703	oxygen carrier activity
TERTU_0971	COG3122	Protein conserved in bacteria
TERTU_0977	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
TERTU_0978	COG0667	Aldo Keto reductase
TERTU_0979	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
TERTU_0981	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
TERTU_0985	COG2885	chlorophyll binding
TERTU_0991	COG0848	biopolymer transport protein
TERTU_0994	COG0742	ribosomal rna small subunit methyltransferase
TERTU_0995	COG0314	molybdopterin synthase activity
TERTU_0996	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
TERTU_0997	COG0315	cyclic pyranopterin monophosphate synthase activity
TERTU_0998	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
TERTU_0999	COG2171	N-acyltransferase activity
TERTU_1000	COG1393	Belongs to the ArsC family
TERTU_1001	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
TERTU_1002	COG0436	Aminotransferase
TERTU_1003	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
TERTU_1004	COG0024	Methionine aminopeptidase
TERTU_1005	COG0052	Belongs to the universal ribosomal protein uS2 family
TERTU_1006	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
TERTU_1007	COG0528	UMP kinase activity
TERTU_1008	COG0233	cytoplasmic translational termination
TERTU_1009	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
TERTU_1010	COG0575	Belongs to the CDS family
TERTU_1014	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
TERTU_1015	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
TERTU_1016	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
TERTU_1017	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
TERTU_1018	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
TERTU_1021	COG0023	Translation Initiation Factor
TERTU_1022	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
TERTU_1024	COG4783	chaperone-mediated protein folding
TERTU_1025	COG0425	Belongs to the sulfur carrier protein TusA family
TERTU_1038	COG0728	peptidoglycan biosynthetic process
TERTU_1039	COG0196	riboflavin kinase activity
TERTU_1040	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
TERTU_1041	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
TERTU_1042	COG1047	Peptidyl-prolyl cis-trans
TERTU_1048	COG4968	Prepilin-type N-terminal cleavage methylation domain
TERTU_1053	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
TERTU_1053	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
TERTU_1060	COG0028	Belongs to the TPP enzyme family
TERTU_1065	COG0583	DNA-binding transcription factor activity
TERTU_1066	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
TERTU_1067	COG1183	phosphatidylcholine synthase activity
TERTU_1074	COG2985	domain, Protein
TERTU_1074	COG0569	domain protein
TERTU_1077	COG0825	malonyl-CoA metabolic process
TERTU_1078	COG1643	Atp-dependent helicase
TERTU_1079	COG2853	Lipoprotein
TERTU_1081	COG2204	response regulator
TERTU_1085	COG2815	serine threonine protein kinase
TERTU_1085	COG0515	serine threonine protein kinase
TERTU_1086	COG1716	ATPase activity
TERTU_1087	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
TERTU_1087	COG1116	anion transmembrane transporter activity
TERTU_1090	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
TERTU_1090	COG1116	anion transmembrane transporter activity
TERTU_1095	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
TERTU_1101	COG3409	Peptidoglycan-binding domain 1 protein
TERTU_1101	COG3267	Type II secretory pathway component ExeA
TERTU_1103	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
TERTU_1104	COG1459	type II secretion system
TERTU_1115	COG3409	Peptidoglycan-binding domain 1 protein
TERTU_1115	COG3267	Type II secretory pathway component ExeA
TERTU_1121	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
TERTU_1125	COG3101	peptidyl-lysine hydroxylation
TERTU_1126	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
TERTU_1126	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
TERTU_1127	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
TERTU_1128	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
TERTU_1128	COG0116	Belongs to the methyltransferase superfamily
TERTU_1129	COG5001	Diguanylate cyclase
TERTU_1129	COG5002	protein histidine kinase activity
TERTU_1132	COG0436	Aminotransferase
TERTU_1133	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
TERTU_1139	COG1131	(ABC) transporter
TERTU_1140	COG0842	Transport permease protein
TERTU_1141	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
TERTU_1141	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
TERTU_1156	COG4536	flavin adenine dinucleotide binding
TERTU_1157	COG4137	Cytochrome C assembly protein
TERTU_1158	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
TERTU_1159	COG0228	four-way junction DNA binding
TERTU_1160	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
TERTU_1161	COG0336	Belongs to the RNA methyltransferase TrmD family
TERTU_1162	COG0335	large ribosomal subunit rRNA binding
TERTU_1163	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
TERTU_1167	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
TERTU_1172	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
TERTU_1174	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
TERTU_1176	COG0354	folic acid binding
TERTU_1184	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
TERTU_1185	COG0481	GTPase activity
TERTU_1186	COG0681	Belongs to the peptidase S26 family
TERTU_1189	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
TERTU_1190	COG1381	Involved in DNA repair and RecF pathway recombination
TERTU_1191	COG0784	Response regulator, receiver
TERTU_1191	COG2205	protein histidine kinase activity
TERTU_1191	COG5002	protein histidine kinase activity
TERTU_1193	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
TERTU_1194	COG3956	TIGRFAM MazG family protein
TERTU_1196	COG0563	adenylate kinase activity
TERTU_1198	COG1214	PFAM Peptidase M22, glycoprotease
TERTU_1199	COG1968	undecaprenyl-diphosphatase activity
TERTU_1204	COG0840	transmembrane signaling receptor activity
TERTU_1210	COG0037	tRNA processing
TERTU_1212	COG1385	rRNA (uridine-N3-)-methyltransferase activity
TERTU_1214	COG3590	peptidase
TERTU_1219	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
TERTU_1220	COG0835	chemotaxis
TERTU_1220	COG0784	Response regulator, receiver
TERTU_1221	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
TERTU_1222	COG1815	bacterial-type flagellum-dependent cell motility
TERTU_1223	COG1558	bacterial-type flagellum-dependent cell motility
TERTU_1224	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
TERTU_1225	COG1749	Flagellar hook protein flgE
TERTU_1229	COG4787	bacterial-type flagellum-dependent cell motility
TERTU_1230	COG4786	Flagellar basal body rod
TERTU_1231	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
TERTU_1238	COG1404	Belongs to the peptidase S8 family
TERTU_1242	COG4977	sequence-specific DNA binding
TERTU_1242	COG1917	Cupin 2, conserved barrel domain protein
TERTU_1243	COG4771	TonB-dependent receptor
TERTU_1244	COG3300	MHYT domain
TERTU_1244	COG5001	Diguanylate cyclase
TERTU_1265	COG4771	TonB-dependent receptor
TERTU_1269	COG2175	clavaminate synthase activity
TERTU_1271	COG1802	Transcriptional regulator
TERTU_1273	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
TERTU_1274	COG2186	Transcriptional regulator
TERTU_1275	COG0730	response to heat
TERTU_1279	COG0405	Gamma-glutamyltransferase
TERTU_1286	COG0252	asparaginase activity
TERTU_1298	COG1228	amidohydrolase
TERTU_1304	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
TERTU_1305	COG0107	imidazoleglycerol-phosphate synthase activity
TERTU_1306	COG1083	cytidylyl-transferase
TERTU_1308	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
TERTU_1309	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
TERTU_1310	COG2089	acid synthase
TERTU_1312	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
TERTU_1313	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
TERTU_1315	COG1334	flagellar protein FlaG
TERTU_1322	COG2204	response regulator
TERTU_1326	COG3852	Histidine kinase
TERTU_1330	COG1677	Flagellar hook-basal body complex protein FliE
TERTU_1339	COG0643	Histidine kinase
TERTU_1339	COG2198	Histidine kinase
TERTU_1340	COG0835	chemotaxis
TERTU_1343	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
TERTU_1344	COG2201	protein-glutamate methylesterase activity
TERTU_1346	COG2201	protein-glutamate methylesterase activity
TERTU_1354	COG1987	bacterial-type flagellum assembly
TERTU_1356	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
TERTU_1358	COG0281	malic enzyme
TERTU_1362	COG0455	bacterial-type flagellum organization
TERTU_1366	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
TERTU_1367	COG2198	Histidine kinase
TERTU_1367	COG0643	Histidine kinase
TERTU_1369	COG2201	protein-glutamate methylesterase activity
TERTU_1370	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
TERTU_1373	COG1192	Involved in chromosome partitioning
TERTU_1375	COG0835	chemotaxis
TERTU_1377	COG1028	Short-chain dehydrogenase reductase Sdr
TERTU_1380	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
TERTU_1381	COG0402	S-adenosylhomocysteine deaminase activity
TERTU_1384	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
TERTU_1385	COG0175	sulfate reduction
TERTU_1387	COG2895	sulfate adenylyltransferase (ATP) activity
TERTU_1388	COG1555	photosystem II stabilization
TERTU_1389	COG0284	orotidine-5'-phosphate decarboxylase activity
TERTU_1390	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
TERTU_1392	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
TERTU_1399	COG0776	regulation of translation
TERTU_1400	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
TERTU_1400	COG0662	Cupin 2, conserved barrel domain protein
TERTU_1414	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
TERTU_1420	COG2211	Major facilitator Superfamily
TERTU_1424	COG4974	Belongs to the 'phage' integrase family
TERTU_1452	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
TERTU_1458	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
TERTU_1459	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
TERTU_1460	COG0072	phenylalanine-tRNA ligase activity
TERTU_1461	COG0776	regulation of translation
TERTU_1469	COG0693	protein deglycase activity
TERTU_1470	COG0277	FAD linked oxidase domain protein
TERTU_1471	COG0625	glutathione transferase activity
TERTU_1477	COG0583	DNA-binding transcription factor activity
TERTU_1483	COG3866	Pectate lyase
TERTU_1485	COG3507	Belongs to the glycosyl hydrolase 43 family
TERTU_1486	COG1028	Short-chain dehydrogenase reductase Sdr
TERTU_1487	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
TERTU_1492	COG2186	Transcriptional regulator
TERTU_1493	COG2721	sulfolactate sulfo-lyase activity
TERTU_1498	COG1501	Belongs to the glycosyl hydrolase 31 family
TERTU_1507	COG3300	MHYT domain
TERTU_1507	COG5001	Diguanylate cyclase
TERTU_1510	COG2977	Belongs to the P-Pant transferase superfamily
TERTU_1515	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
TERTU_1524	COG4657	Part of a membrane complex involved in electron transport
TERTU_1525	COG2878	Part of a membrane complex involved in electron transport
TERTU_1529	COG4660	Part of a membrane complex involved in electron transport
TERTU_1532	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
TERTU_1537	COG1348	The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex which has 2 components the iron protein and the molybdenum-iron protein
TERTU_1560	COG0686	Belongs to the AlaDH PNT family
TERTU_1566	COG0247	lactate metabolic process
TERTU_1570	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
TERTU_1571	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
TERTU_1582	COG3383	formate dehydrogenase (NAD+) activity
TERTU_1583	COG3411	Ferredoxin
TERTU_1599	COG3693	PFAM glycoside hydrolase, family 10
TERTU_1600	COG0745	RESPONSE REGULATOR receiver
TERTU_1600	COG2205	protein histidine kinase activity
TERTU_1600	COG4191	Histidine kinase
TERTU_1601	COG5002	protein histidine kinase activity
TERTU_1601	COG5001	Diguanylate cyclase
TERTU_1607	COG3706	GGDEF domain
TERTU_1607	COG0745	RESPONSE REGULATOR receiver
TERTU_1610	COG1166	arginine decarboxylase activity
TERTU_1614	COG1090	epimerase
TERTU_1615	COG0071	Belongs to the small heat shock protein (HSP20) family
TERTU_1619	COG1917	Cupin 2, conserved barrel domain protein
TERTU_1619	COG1396	sequence-specific DNA binding
TERTU_1620	COG1024	Enoyl-CoA hydratase
TERTU_1620	COG1250	3-hydroxyacyl-CoA dehydrogenase
TERTU_1621	COG0183	Belongs to the thiolase family
TERTU_1623	COG0544	peptidyl-prolyl cis-trans isomerase activity
TERTU_1624	COG0740	serine-type endopeptidase activity
TERTU_1625	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
TERTU_1626	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
TERTU_1628	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
TERTU_1630	COG1322	Protein conserved in bacteria
TERTU_1632	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
TERTU_1635	COG0670	Belongs to the BI1 family
TERTU_1637	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
TERTU_1640	COG3501	Rhs element vgr protein
TERTU_1701	COG0471	metal ion transport
TERTU_1704	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
TERTU_1705	COG4181	ATPase activity
TERTU_1708	COG1530	ribonuclease E activity
TERTU_1711	COG0546	phosphoglycolate phosphatase activity
TERTU_1713	COG0488	(ABC) transporter
TERTU_1714	COG0424	maF-like protein
TERTU_1715	COG1399	metal-binding, possibly nucleic acid-binding protein
TERTU_1716	COG0333	Belongs to the bacterial ribosomal protein bL32 family
TERTU_1717	COG0416	fatty acid biosynthetic process
TERTU_1718	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
TERTU_1721	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
TERTU_1722	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
TERTU_1724	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
TERTU_1725	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
TERTU_1726	COG0564	pseudouridine synthase activity
TERTU_1729	COG0084	hydrolase, TatD family'
TERTU_1732	COG0039	L-malate dehydrogenase activity
TERTU_1734	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
TERTU_1735	COG4753	response regulator
TERTU_1735	COG2207	Transcriptional regulator
TERTU_1736	COG1862	Preprotein translocase
TERTU_1738	COG2515	1-aminocyclopropane-1-carboxylate deaminase
TERTU_1739	COG1115	amino acid carrier protein
TERTU_1742	COG0583	DNA-binding transcription factor activity
TERTU_1747	COG2153	protein acetylation
TERTU_1748	COG2850	peptidyl-arginine hydroxylation
TERTU_1750	COG2915	High frequency lysogenization protein hflD homolog
TERTU_1751	COG0482	sulfurtransferase activity
TERTU_1752	COG2267	carboxylic ester hydrolase activity
TERTU_1755	COG4591	ABC-type transport system involved in lipoprotein release permease component
TERTU_1756	COG1136	(ABC) transporter
TERTU_1829	COG3706	GGDEF domain
TERTU_1830	COG0500	methyltransferase
TERTU_1831	COG4106	trans-aconitate 2-methyltransferase activity
TERTU_1836	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
TERTU_1839	COG0745	RESPONSE REGULATOR receiver
TERTU_1839	COG3706	GGDEF domain
TERTU_1842	COG1575	Belongs to the MenA family. Type 1 subfamily
TERTU_1843	COG1515	deoxyribonuclease V activity
TERTU_1859	COG3123	guanosine phosphorylase activity
TERTU_1860	COG2205	protein histidine kinase activity
TERTU_1861	COG2257	FlhB HrpN YscU SpaS Family
TERTU_1863	COG4133	protoheme IX ABC transporter activity
TERTU_1867	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
TERTU_1870	COG2957	Belongs to the agmatine deiminase family
TERTU_1871	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
TERTU_1880	COG1196	nuclear chromosome segregation
TERTU_1882	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
TERTU_1889	COG1960	acyl-CoA dehydrogenase activity
TERTU_1891	COG0318	PFAM AMP-dependent synthetase and ligase
TERTU_1892	COG0330	HflC and HflK could
TERTU_1904	COG3437	response regulator, receiver
TERTU_1904	COG3850	Histidine kinase
TERTU_1904	COG2205	protein histidine kinase activity
TERTU_1904	COG4999	Histidine kinase
TERTU_1905	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
TERTU_1906	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
TERTU_1907	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
TERTU_1908	COG0215	cysteine-tRNA ligase activity
TERTU_1911	COG2205	protein histidine kinase activity
TERTU_1911	COG2202	Pas domain
TERTU_1913	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
TERTU_1916	COG1278	Cold shock
TERTU_1920	COG0564	pseudouridine synthase activity
TERTU_1924	COG2813	Specifically methylates the guanine in position
TERTU_1925	COG1187	pseudouridine synthase activity
TERTU_1926	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
TERTU_1931	COG0840	transmembrane signaling receptor activity
TERTU_1938	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
TERTU_1941	COG1472	Belongs to the glycosyl hydrolase 3 family
TERTU_1943	COG0668	transmembrane transport
TERTU_1946	COG1278	Cold shock
TERTU_1948	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
TERTU_1949	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
TERTU_1953	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
TERTU_1954	COG2871	sodium ion transport
TERTU_1955	COG1477	protein flavinylation
TERTU_1957	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
TERTU_1961	COG1278	Cold shock
TERTU_1962	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
TERTU_1963	COG0542	response to heat
TERTU_1964	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
TERTU_1966	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
TERTU_1967	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
TERTU_1968	COG0492	ferredoxin-NADP+ reductase activity
TERTU_1970	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
TERTU_1971	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
TERTU_1972	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
TERTU_1973	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
TERTU_1974	COG1648	precorrin-2 dehydrogenase activity
TERTU_1974	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
TERTU_1978	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
TERTU_1980	COG0798	PFAM Bile acid sodium symporter
TERTU_1982	COG0640	Transcriptional regulator
TERTU_1983	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
TERTU_1990	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
TERTU_1990	COG3321	synthase
TERTU_1990	COG4221	oxidoreductase activity
TERTU_1990	COG1028	Short-chain dehydrogenase reductase Sdr
TERTU_1992	COG0156	8-amino-7-oxononanoate synthase activity
TERTU_2000	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
TERTU_2012	COG2233	PERMEase
TERTU_2015	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
TERTU_2018	COG0811	peptide transport
TERTU_2019	COG0811	peptide transport
TERTU_2020	COG0848	biopolymer transport protein
TERTU_2025	COG0730	response to heat
TERTU_2026	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
TERTU_2028	COG1028	Short-chain dehydrogenase reductase Sdr
TERTU_2050	COG4771	TonB-dependent receptor
TERTU_2052	COG0523	cobalamin synthesis protein
TERTU_2055	COG0500	methyltransferase
TERTU_2062	COG0402	S-adenosylhomocysteine deaminase activity
TERTU_2063	COG2351	hydroxyisourate hydrolase activity
TERTU_2066	COG1529	Aldehyde oxidase and xanthine dehydrogenase
TERTU_2069	COG1309	transcriptional regulator
TERTU_2073	COG2252	PERMEase
TERTU_2076	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
TERTU_2077	COG1858	cytochrome C peroxidase
TERTU_2081	COG0625	glutathione transferase activity
TERTU_2083	COG0339	signal peptide processing
TERTU_2088	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
TERTU_2093	COG3046	protein related to deoxyribodipyrimidine photolyase
TERTU_2096	COG3291	Pkd domain containing protein
TERTU_2096	COG4412	M6 family metalloprotease domain protein
TERTU_2100	COG3104	oligopeptide transport
TERTU_2102	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
TERTU_2106	COG4166	transmembrane transport
TERTU_2108	COG1388	LysM domain
TERTU_2108	COG0741	lytic transglycosylase activity
TERTU_2109	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
TERTU_2110	COG2226	methyltransferase
TERTU_2111	COG0328	RNA-DNA hybrid ribonuclease activity
TERTU_2112	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
TERTU_2113	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
TERTU_2117	COG0616	signal peptide processing
TERTU_2118	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
TERTU_2118	COG0475	glutathione-regulated potassium exporter activity
TERTU_2120	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
TERTU_2127	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
TERTU_2127	COG0316	Belongs to the HesB IscA family
TERTU_2129	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
TERTU_2131	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
TERTU_2134	COG1946	Acyl-CoA thioesterase
TERTU_2141	COG0708	Exodeoxyribonuclease III
TERTU_2145	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
TERTU_2150	COG0656	L-ascorbic acid biosynthetic process
TERTU_2152	COG1902	pentaerythritol trinitrate reductase activity
TERTU_2154	COG0604	alcohol dehydrogenase
TERTU_2158	COG1917	Cupin 2, conserved barrel domain protein
TERTU_2158	COG4977	sequence-specific DNA binding
TERTU_2172	COG0110	maltose O-acetyltransferase activity
TERTU_2191	COG3034	peptidoglycan biosynthetic process
TERTU_2193	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
TERTU_2194	COG0583	DNA-binding transcription factor activity
TERTU_2198	COG0454	-acetyltransferase
TERTU_2202	COG0318	PFAM AMP-dependent synthetase and ligase
TERTU_2202	COG3321	synthase
TERTU_2202	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
TERTU_2202	COG0300	oxidoreductase activity
TERTU_2202	COG1028	Short-chain dehydrogenase reductase Sdr
TERTU_2203	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
TERTU_2203	COG3321	synthase
TERTU_2203	COG0300	oxidoreductase activity
TERTU_2203	COG3321	synthase
TERTU_2203	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
TERTU_2203	COG4221	oxidoreductase activity
TERTU_2203	COG0300	oxidoreductase activity
TERTU_2203	COG4221	oxidoreductase activity
TERTU_2204	COG3321	synthase
TERTU_2204	COG1028	Short-chain dehydrogenase reductase Sdr
TERTU_2204	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
TERTU_2204	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
TERTU_2204	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
TERTU_2207	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
TERTU_2207	COG2070	2-Nitropropane dioxygenase
TERTU_2211	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
TERTU_2232	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
TERTU_2236	COG1309	transcriptional regulator
TERTU_2238	COG1131	(ABC) transporter
TERTU_2239	COG0842	Transport permease protein
TERTU_2240	COG2885	chlorophyll binding
TERTU_2251	COG0583	DNA-binding transcription factor activity
TERTU_2253	COG0318	PFAM AMP-dependent synthetase and ligase
TERTU_2258	COG0277	FAD linked oxidase domain protein
TERTU_2260	COG3263	regulation of cellular component size
TERTU_2263	COG0523	cobalamin synthesis protein
TERTU_2266	COG1121	(ABC) transporter
TERTU_2268	COG0803	Belongs to the bacterial solute-binding protein 9 family
TERTU_2271	COG0577	efflux transmembrane transporter activity
TERTU_2271	COG1136	(ABC) transporter
TERTU_2274	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
TERTU_2278	COG1136	(ABC) transporter
TERTU_2281	COG4555	ABC transporter
TERTU_2283	COG3251	PFAM MbtH domain protein
TERTU_2285	COG2124	cytochrome p450
TERTU_2286	COG0300	oxidoreductase activity
TERTU_2286	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
TERTU_2286	COG1028	Short-chain dehydrogenase reductase Sdr
TERTU_2286	COG3321	synthase
TERTU_2286	COG0318	PFAM AMP-dependent synthetase and ligase
TERTU_2304	COG2186	Transcriptional regulator
TERTU_2307	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
TERTU_2314	COG3693	PFAM glycoside hydrolase, family 10
TERTU_2315	COG1063	alcohol dehydrogenase
TERTU_2316	COG1028	Short-chain dehydrogenase reductase Sdr
TERTU_2317	COG0596	Alpha beta hydrolase
TERTU_2320	COG3693	PFAM glycoside hydrolase, family 10
TERTU_2321	COG3693	PFAM glycoside hydrolase, family 10
TERTU_2329	COG3507	Belongs to the glycosyl hydrolase 43 family
TERTU_2330	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
TERTU_2336	COG4615	Cyclic peptide transporter
TERTU_2346	COG4325	translation initiation factor activity
TERTU_2355	COG1522	sequence-specific DNA binding
TERTU_2356	COG0457	Tetratricopeptide repeat
TERTU_2357	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
TERTU_2358	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
TERTU_2360	COG1012	belongs to the aldehyde dehydrogenase family
TERTU_2361	COG3724	N-succinylarginine dihydrolase activity
TERTU_2375	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
TERTU_2376	COG0604	alcohol dehydrogenase
TERTU_2376	COG3321	synthase
TERTU_2377	COG0604	alcohol dehydrogenase
TERTU_2377	COG3321	synthase
TERTU_2393	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
TERTU_2394	COG1715	Restriction endonuclease
TERTU_2400	COG3609	addiction module antidote protein, CC2985 family
TERTU_2407	COG0322	excinuclease ABC activity
TERTU_2416	COG0463	Glycosyl transferase, family 2
TERTU_2417	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
TERTU_2418	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
TERTU_2419	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
TERTU_2421	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
TERTU_2424	COG0556	nucleotide-excision repair
TERTU_2425	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
TERTU_2425	COG0116	Belongs to the methyltransferase superfamily
TERTU_2426	COG3130	regulation of translation
TERTU_2427	COG0167	dihydroorotate dehydrogenase activity
TERTU_2430	COG0714	Associated with various cellular activities
TERTU_2436	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
TERTU_2439	COG3038	cytochrome b561
TERTU_2440	COG0308	aminopeptidase N
TERTU_2441	COG3139	Protein of unknown function (DUF1315)
TERTU_2443	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
TERTU_2444	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
TERTU_2456	COG0589	response to stress
TERTU_2458	COG0741	lytic transglycosylase activity
TERTU_2460	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
TERTU_2461	COG0812	UDP-N-acetylmuramate dehydrogenase activity
TERTU_2462	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
TERTU_2463	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
TERTU_2464	COG1663	tetraacyldisaccharide 4'-kinase activity
TERTU_2465	COG0848	biopolymer transport protein
TERTU_2466	COG0811	peptide transport
TERTU_2470	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
TERTU_2472	COG0009	L-threonylcarbamoyladenylate synthase
TERTU_2473	COG0613	PHP domain protein
TERTU_2475	COG2350	Protein conserved in bacteria
TERTU_2477	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
TERTU_2478	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
TERTU_2481	COG0004	ammonium transporteR
TERTU_2484	COG0714	Associated with various cellular activities
TERTU_2488	COG1286	toxin biosynthetic process
TERTU_2492	COG0285	dihydrofolate synthase activity
TERTU_2493	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
TERTU_2494	COG0159	tryptophan synthase activity
TERTU_2495	COG0133	tryptophan synthase activity
TERTU_2496	COG0135	phosphoribosylanthranilate isomerase activity
TERTU_2500	COG0473	3-isopropylmalate dehydrogenase activity
TERTU_2501	COG0066	3-isopropylmalate dehydratase activity
TERTU_2502	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
TERTU_2507	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
TERTU_2509	COG0302	gtp cyclohydrolase
TERTU_2513	COG2062	phosphohistidine phosphatase, SixA
TERTU_2515	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
TERTU_2516	COG0326	Molecular chaperone. Has ATPase activity
TERTU_2519	COG0045	succinate-CoA ligase (ADP-forming) activity
TERTU_2526	COG2009	succinate dehydrogenase
TERTU_2530	COG1131	(ABC) transporter
TERTU_2534	COG0513	Belongs to the DEAD box helicase family
TERTU_2536	COG0714	Associated with various cellular activities
TERTU_2543	COG0545	Peptidyl-prolyl cis-trans isomerase
TERTU_2544	COG2974	May be involved in recombination
TERTU_2545	COG4681	YaeQ
TERTU_2546	COG3693	PFAM glycoside hydrolase, family 10
TERTU_2553	COG3128	pkhd-type hydroxylase
TERTU_2555	COG4774	siderophore transport
TERTU_2556	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
TERTU_2558	COG0848	biopolymer transport protein
TERTU_2559	COG0811	peptide transport
TERTU_2561	COG1690	Belongs to the RtcB family
TERTU_2563	COG4650	regulator
TERTU_2565	COG1162	GTPase activity
TERTU_2567	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
TERTU_2569	COG3039	Transposase
TERTU_2570	COG3039	Transposase
TERTU_2579	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
TERTU_2582	COG2095	MarC family integral membrane protein
TERTU_2583	COG0697	spore germination
TERTU_2584	COG0783	Belongs to the Dps family
TERTU_2585	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
TERTU_2586	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
TERTU_2589	COG0516	GMP reductase activity
TERTU_2589	COG0517	IMP dehydrogenase activity
TERTU_2591	COG0667	Aldo Keto reductase
TERTU_2595	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
TERTU_2597	COG0590	tRNA wobble adenosine to inosine editing
TERTU_2598	COG2226	methyltransferase
TERTU_2600	COG0716	FMN binding
TERTU_2601	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
TERTU_2601	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
TERTU_2606	COG0676	glucose-6-phosphate 1-epimerase activity
TERTU_2610	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
TERTU_2612	COG3094	Invasion gene expression up-regulator, SirB
TERTU_2615	COG0518	GMP synthase (glutamine-hydrolyzing) activity
TERTU_2615	COG0519	Catalyzes the synthesis of GMP from XMP
TERTU_2618	COG1570	exodeoxyribonuclease VII activity
TERTU_2623	COG2022	thiamine diphosphate biosynthetic process
TERTU_2624	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
TERTU_2625	COG0730	response to heat
TERTU_2630	COG1160	GTP binding
TERTU_2631	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
TERTU_2632	COG2976	Protein conserved in bacteria
TERTU_2633	COG0124	histidyl-tRNA synthetase
TERTU_2636	COG0820	rRNA (adenine-C2-)-methyltransferase activity
TERTU_2637	COG0105	UTP biosynthetic process
TERTU_2640	COG2166	iron-sulfur cluster assembly
TERTU_2643	COG0316	Belongs to the HesB IscA family
TERTU_2644	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
TERTU_2645	COG0719	Fe-S assembly protein
TERTU_2646	COG0396	ATPase activity
TERTU_2647	COG0719	Fe-S assembly protein
TERTU_2652	COG2205	protein histidine kinase activity
TERTU_2652	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
TERTU_2656	COG0343	queuine tRNA-ribosyltransferase activity
TERTU_2657	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
TERTU_2667	COG0300	oxidoreductase activity
TERTU_2668	COG1309	transcriptional regulator
TERTU_2669	COG0024	Methionine aminopeptidase
TERTU_2683	COG2169	Transcriptional regulator
TERTU_2684	COG3250	beta-galactosidase activity
TERTU_2705	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
TERTU_2707	COG1597	lipid kinase activity
TERTU_2711	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
TERTU_2715	COG0795	lipopolysaccharide-transporting ATPase activity
TERTU_2716	COG0795	lipopolysaccharide-transporting ATPase activity
TERTU_2717	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
TERTU_2719	COG3706	GGDEF domain
TERTU_2721	COG0525	valine-tRNA ligase activity
TERTU_2722	COG4221	oxidoreductase activity
TERTU_2723	COG2050	protein possibly involved in aromatic compounds catabolism
TERTU_2724	COG0318	PFAM AMP-dependent synthetase and ligase
TERTU_2731	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
TERTU_2733	COG0501	Belongs to the peptidase M48B family
TERTU_2736	COG2900	Belongs to the SlyX family
TERTU_2737	COG2983	Belongs to the UPF0260 family
TERTU_2738	COG3100	YcgL domain-containing protein
TERTU_2740	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
TERTU_2741	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
TERTU_2748	COG3447	MASE1 domain protein
TERTU_2748	COG5002	protein histidine kinase activity
TERTU_2748	COG5001	Diguanylate cyclase
TERTU_2749	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
TERTU_2752	COG3118	belongs to the thioredoxin family
TERTU_2753	COG1028	Short-chain dehydrogenase reductase Sdr
TERTU_2757	COG5394	Polyhydroxyalkanoate synthesis repressor PhaR
TERTU_2758	COG3243	poly(R)-hydroxyalkanoic acid synthase
TERTU_2759	COG1028	Short-chain dehydrogenase reductase Sdr
TERTU_2762	COG3459	Glycosyltransferase 36 associated
TERTU_2765	COG2211	Major facilitator Superfamily
TERTU_2769	COG1983	PspC domain protein
TERTU_2771	COG1842	Phage shock protein A
TERTU_2772	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
TERTU_2776	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
TERTU_2779	COG1739	Uncharacterized protein family UPF0029
TERTU_2781	COG0271	Belongs to the BolA IbaG family
TERTU_2784	COG0469	pyruvate kinase activity
TERTU_2785	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
TERTU_2786	COG5016	pyruvate
TERTU_2786	COG0511	ligase activity, forming carbon-carbon bonds
TERTU_2787	COG3630	sodium ion export across plasma membrane
TERTU_2788	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
TERTU_2789	COG0405	Gamma-glutamyltransferase
TERTU_2791	COG1803	Methylglyoxal synthase
TERTU_2800	COG2205	protein histidine kinase activity
TERTU_2809	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
TERTU_2810	COG0527	aspartate kinase activity
TERTU_2811	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
TERTU_2812	COG0537	adenosine 5'-monophosphoramidase activity
TERTU_2813	COG2835	tetraacyldisaccharide 4'-kinase activity
TERTU_2814	COG0739	heme binding
TERTU_2817	COG0133	tryptophan synthase activity
TERTU_2818	COG0159	tryptophan synthase activity
TERTU_2823	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
TERTU_2828	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
TERTU_2829	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
TERTU_2833	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
TERTU_2834	COG0585	pseudouridine synthase activity
TERTU_2836	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
TERTU_2841	COG2353	YceI-like domain
TERTU_2842	COG1472	Belongs to the glycosyl hydrolase 3 family
TERTU_2843	COG3661	Belongs to the glycosyl hydrolase 67 family
TERTU_2844	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
TERTU_2845	COG4221	oxidoreductase activity
TERTU_2847	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
TERTU_2849	COG0148	phosphopyruvate hydratase activity
TERTU_2850	COG2877	3-deoxy-8-phosphooctulonate synthase activity
TERTU_2851	COG0504	CTP synthase activity
TERTU_2852	COG0037	tRNA processing
TERTU_2854	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
TERTU_2861	COG4615	Cyclic peptide transporter
TERTU_2869	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
TERTU_2872	COG1522	sequence-specific DNA binding
TERTU_2873	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
TERTU_2874	COG0259	pyridoxamine-phosphate oxidase activity
TERTU_2875	COG0746	molybdenum cofactor guanylyltransferase activity
TERTU_2894	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
TERTU_2895	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
TERTU_2898	COG5297	Belongs to the glycosyl hydrolase family 6
TERTU_2902	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
TERTU_2905	COG0640	Transcriptional regulator
TERTU_2911	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
TERTU_2918	COG2223	nitrite transmembrane transporter activity
TERTU_2919	COG2815	serine threonine protein kinase
TERTU_2919	COG0515	serine threonine protein kinase
TERTU_2920	COG0840	transmembrane signaling receptor activity
TERTU_2924	COG1940	carbohydrate kinase activity
TERTU_2929	COG0587	DNA-directed DNA polymerase activity
TERTU_2931	COG0837	glucose binding
TERTU_2935	COG0840	transmembrane signaling receptor activity
TERTU_2937	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
TERTU_2939	COG0745	RESPONSE REGULATOR receiver
TERTU_2940	COG5002	protein histidine kinase activity
TERTU_2942	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
TERTU_2944	COG3639	organic phosphonate transmembrane transporter activity
TERTU_2947	COG2146	nitrite reductase [NAD(P)H] activity
TERTU_2947	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
TERTU_2948	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
TERTU_2949	COG1648	precorrin-2 dehydrogenase activity
TERTU_2949	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
TERTU_2954	COG0247	lactate metabolic process
TERTU_2954	COG0277	FAD linked oxidase domain protein
TERTU_2957	COG1028	Short-chain dehydrogenase reductase Sdr
TERTU_2958	COG1024	Enoyl-CoA hydratase
TERTU_2959	COG0018	arginyl-trna synthetase
TERTU_2961	COG1199	ATP-dependent helicase activity
TERTU_2963	COG3706	GGDEF domain
TERTU_2963	COG5001	Diguanylate cyclase
TERTU_2963	COG4251	negative regulation of phosphorylation
TERTU_2963	COG2203	Gaf domain
TERTU_2965	COG0540	Belongs to the ATCase OTCase family
TERTU_2966	COG2925	Exonuclease
TERTU_2967	COG0288	reversible hydration of carbon dioxide
TERTU_2968	COG0717	Belongs to the dCTP deaminase family
TERTU_2969	COG0489	protein tyrosine kinase activity
TERTU_2971	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
TERTU_2971	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
TERTU_2972	COG4657	Part of a membrane complex involved in electron transport
TERTU_2973	COG2878	Part of a membrane complex involved in electron transport
TERTU_2975	COG4658	electron transport chain
TERTU_2976	COG4659	FMN binding
TERTU_2977	COG4660	Part of a membrane complex involved in electron transport
TERTU_2979	COG0512	Glutamine amidotransferase of anthranilate synthase
TERTU_2979	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
TERTU_2980	COG0346	lactoylglutathione lyase activity
TERTU_2984	COG0393	Putative heavy-metal-binding
TERTU_2986	COG1595	DNA-templated transcription, initiation
TERTU_2988	COG0693	protein deglycase activity
TERTU_2991	COG2217	Heavy metal translocating P-type atpase
TERTU_2994	COG2010	Cytochrome c
TERTU_2997	COG3278	Belongs to the heme-copper respiratory oxidase family
TERTU_2998	COG0137	argininosuccinate synthase activity
TERTU_2999	COG0390	transport system, permease component
TERTU_3002	COG0418	dihydroorotase activity
TERTU_3003	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
TERTU_3004	COG3977	Valine--pyruvate aminotransferase
TERTU_3005	COG4753	response regulator
TERTU_3005	COG2207	Transcriptional regulator
TERTU_3006	COG1295	ribonuclease BN
TERTU_3007	COG1393	Belongs to the ArsC family
TERTU_3010	COG0616	signal peptide processing
TERTU_3011	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
TERTU_3013	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
TERTU_3014	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
TERTU_3016	COG2154	pterin-4-alpha-carbinolamine dehydratase
TERTU_3022	COG0459	protein refolding
TERTU_3023	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
TERTU_3027	COG3023	N-Acetylmuramoyl-L-alanine amidase
TERTU_3033	COG4969	Belongs to the N-Me-Phe pilin family
TERTU_3036	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
TERTU_3037	COG0237	dephospho-CoA kinase activity
TERTU_3041	COG0653	protein targeting
TERTU_3042	COG0739	heme binding
TERTU_3043	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
TERTU_3046	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
TERTU_3047	COG1181	Belongs to the D-alanine--D-alanine ligase family
TERTU_3048	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
TERTU_3049	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
TERTU_3050	COG0772	Belongs to the SEDS family
TERTU_3051	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
TERTU_3052	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
TERTU_3053	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
TERTU_3054	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
TERTU_3057	COG0275	rRNA processing
TERTU_3058	COG2001	Belongs to the MraZ family
TERTU_3059	COG2205	protein histidine kinase activity
TERTU_3059	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
TERTU_3061	COG0316	Belongs to the HesB IscA family
TERTU_3064	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
TERTU_3068	COG0352	thiamine-phosphate diphosphorylase activity
TERTU_3069	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
TERTU_3073	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
TERTU_3078	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
TERTU_3079	COG0511	ligase activity, forming carbon-carbon bonds
TERTU_3081	COG2264	protein methyltransferase activity
TERTU_3086	COG0138	bifunctional purine biosynthesis protein purh
TERTU_3087	COG0151	Belongs to the GarS family
TERTU_3096	COG3706	GGDEF domain
TERTU_3096	COG0745	RESPONSE REGULATOR receiver
TERTU_3113	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
TERTU_3114	COG1518	maintenance of DNA repeat elements
TERTU_3121	COG0659	secondary active sulfate transmembrane transporter activity
TERTU_3122	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
TERTU_3123	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
TERTU_3124	COG1765	OsmC-like protein
TERTU_3127	COG0134	indole-3-glycerol-phosphate synthase activity
TERTU_3128	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
TERTU_3134	COG2198	Histidine kinase
TERTU_3134	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
TERTU_3134	COG0784	Response regulator, receiver
TERTU_3134	COG2205	protein histidine kinase activity
TERTU_3135	COG2204	response regulator
TERTU_3138	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
TERTU_3139	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
TERTU_3141	COG3178	'Phosphotransferase
TERTU_3142	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
TERTU_3143	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
TERTU_3144	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
TERTU_3145	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
TERTU_3147	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
TERTU_3148	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
TERTU_3149	COG2766	serine protein kinase
TERTU_3150	COG2718	Belongs to the UPF0229 family
TERTU_3151	COG2719	SpoVR family
TERTU_3152	COG2719	SpoVR family
TERTU_3154	COG0617	tRNA 3'-terminal CCA addition
TERTU_3156	COG0302	gtp cyclohydrolase
TERTU_3156	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
TERTU_3157	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
TERTU_3158	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
TERTU_3159	COG1620	l-lactate permease
TERTU_3161	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
TERTU_3162	COG0828	Belongs to the bacterial ribosomal protein bS21 family
TERTU_3163	COG1610	YqeY-like protein
TERTU_3165	COG3769	mannosylglycerate metabolic process
TERTU_3166	COG1215	transferase activity, transferring glycosyl groups
TERTU_3182	COG4555	ABC transporter
TERTU_3185	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
TERTU_3186	COG0521	Mo-molybdopterin cofactor biosynthetic process
TERTU_3190	COG1360	Flagellar Motor Protein
TERTU_3191	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
TERTU_3194	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
TERTU_3195	COG0140	phosphoribosyl-ATP diphosphatase activity
TERTU_3196	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
TERTU_3197	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
TERTU_3199	COG2205	protein histidine kinase activity
TERTU_3201	COG0745	RESPONSE REGULATOR receiver
TERTU_3204	COG1490	D-aminoacyl-tRNA deacylase activity
TERTU_3205	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
TERTU_3207	COG1984	allophanate hydrolase subunit 2
TERTU_3209	COG4191	Histidine kinase
TERTU_3213	COG1185	polyribonucleotide nucleotidyltransferase activity
TERTU_3214	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
TERTU_3215	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
TERTU_3216	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
TERTU_3217	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
TERTU_3218	COG2251	uridine kinase activity
TERTU_3218	COG0195	Participates in both transcription termination and antitermination
TERTU_3219	COG0779	Required for maturation of 30S ribosomal subunits
TERTU_3221	COG2199	diguanylate cyclase activity
TERTU_3226	COG0848	biopolymer transport protein
TERTU_3227	COG0811	peptide transport
TERTU_3228	COG0811	peptide transport
TERTU_3230	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
TERTU_3240	COG1657	PFAM Prenyltransferase squalene oxidase
TERTU_3241	COG1562	ergosterol biosynthetic process
TERTU_3244	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
TERTU_3249	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
TERTU_3250	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
TERTU_3251	COG3425	synthase
TERTU_3252	COG0142	geranyltranstransferase activity
TERTU_3256	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
TERTU_3260	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
TERTU_3261	COG0149	triose-phosphate isomerase activity
TERTU_3262	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
TERTU_3263	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
TERTU_3264	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
TERTU_3265	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
TERTU_3267	COG2205	protein histidine kinase activity
TERTU_3268	COG0745	RESPONSE REGULATOR receiver
TERTU_3272	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
TERTU_3274	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
TERTU_3278	COG2226	methyltransferase
TERTU_3280	COG0318	PFAM AMP-dependent synthetase and ligase
TERTU_3280	COG0204	Acyl-transferase
TERTU_3281	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
TERTU_3282	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
TERTU_3288	COG1028	Short-chain dehydrogenase reductase Sdr
TERTU_3289	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
TERTU_3290	COG2198	Histidine kinase
TERTU_3290	COG0643	Histidine kinase
TERTU_3291	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
TERTU_3292	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
TERTU_3293	COG0505	Belongs to the CarA family
TERTU_3294	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
TERTU_3295	COG0484	heat shock protein binding
TERTU_3296	COG0443	Heat shock 70 kDa protein
TERTU_3297	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
TERTU_3298	COG0497	DNA recombination
TERTU_3300	COG2914	Belongs to the UPF0125 (RnfH) family
TERTU_3301	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
TERTU_3302	COG2867	negative regulation of translational initiation
TERTU_3303	COG0733	neurotransmitter:sodium symporter activity
TERTU_3305	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
TERTU_3309	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
TERTU_3313	COG0583	DNA-binding transcription factor activity
TERTU_3314	COG2258	MOSC domain
TERTU_3322	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
TERTU_3327	COG2084	Dehydrogenase
TERTU_3328	COG3384	dioxygenase
TERTU_3329	COG0435	Glutathione S-transferase
TERTU_3330	COG2259	Doxx family
TERTU_3335	COG0583	DNA-binding transcription factor activity
TERTU_3340	COG2814	Major facilitator Superfamily
TERTU_3342	COG1940	carbohydrate kinase activity
TERTU_3348	COG3153	acetyltransferase
TERTU_3348	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
TERTU_3349	COG3693	PFAM glycoside hydrolase, family 10
TERTU_3356	COG3401	FG-GAP repeat protein
TERTU_3361	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
TERTU_3367	COG0840	transmembrane signaling receptor activity
TERTU_3370	COG0028	Belongs to the TPP enzyme family
TERTU_3375	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
TERTU_3377	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
TERTU_3379	COG0527	aspartate kinase activity
TERTU_3380	COG1917	Cupin 2, conserved barrel domain protein
TERTU_3381	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
TERTU_3383	COG1846	Transcriptional regulator
TERTU_3384	COG0189	ligase activity
TERTU_3386	COG0189	ligase activity
TERTU_3386	COG4067	protein conserved in archaea
TERTU_3387	COG3693	PFAM glycoside hydrolase, family 10
TERTU_3391	COG0745	RESPONSE REGULATOR receiver
TERTU_3392	COG2205	protein histidine kinase activity
TERTU_3393	COG1482	cell wall glycoprotein biosynthetic process
TERTU_3394	COG0519	Catalyzes the synthesis of GMP from XMP
TERTU_3395	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
TERTU_3400	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
TERTU_3403	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
TERTU_3404	COG2329	Antibiotic biosynthesis monooxygenase
TERTU_3413	COG0033	Phosphoglucomutase
TERTU_3417	COG0456	acetyltransferase
TERTU_3419	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
TERTU_3421	COG0217	transcriptional regulatory protein
TERTU_3422	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
TERTU_3425	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
TERTU_3427	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
TERTU_3428	COG2885	chlorophyll binding
TERTU_3429	COG0823	Involved in the tonB-independent uptake of proteins
TERTU_3433	COG0824	Thioesterase
TERTU_3434	COG2255	four-way junction helicase activity
TERTU_3435	COG0632	four-way junction helicase activity
TERTU_3436	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
TERTU_3442	COG1216	Glycosyl transferase, family 2
TERTU_3448	COG0745	RESPONSE REGULATOR receiver
TERTU_3448	COG3706	GGDEF domain
TERTU_3469	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
TERTU_3471	COG3380	Catalyzes the oxidation of the 1,2-dihydro- and 1,6- dihydro- isomeric forms of beta-NAD(P) back to beta-NAD(P) . May serve to protect primary metabolism dehydrogenases from inhibition by the 1,2-dihydro- and 1,6-dihydro-beta-NAD(P) isomers
TERTU_3472	COG0300	oxidoreductase activity
TERTU_3474	COG1595	DNA-templated transcription, initiation
TERTU_3475	COG3806	Anti-sigma factor
TERTU_3478	COG2205	protein histidine kinase activity
TERTU_3478	COG0784	Response regulator, receiver
TERTU_3478	COG5002	protein histidine kinase activity
TERTU_3482	COG1116	anion transmembrane transporter activity
TERTU_3484	COG3665	Urea carboxylase-associated protein
TERTU_3485	COG0439	Biotin carboxylase
TERTU_3490	COG1671	Belongs to the UPF0178 family
TERTU_3494	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
TERTU_3494	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
TERTU_3494	COG0674	pyruvate-flavodoxin oxidoreductase activity
TERTU_3494	COG1013	pyruvate-flavodoxin oxidoreductase activity
TERTU_3495	COG0493	'glutamate synthase
TERTU_3520	COG3220	belongs to the UPF0276 family
TERTU_3530	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
TERTU_3534	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
TERTU_3536	COG0513	Belongs to the DEAD box helicase family
TERTU_3537	COG0730	response to heat
TERTU_3541	COG3530	Putative quorum-sensing-regulated virulence factor
TERTU_3542	COG1666	GTP binding
TERTU_3545	COG1607	acyl-coa hydrolase
TERTU_3546	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
TERTU_3548	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
TERTU_3551	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
TERTU_3552	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
TERTU_3554	COG0330	HflC and HflK could
TERTU_3556	COG0330	HflC and HflK could
TERTU_3557	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
TERTU_3558	COG1923	regulation of RNA biosynthetic process
TERTU_3559	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
TERTU_3560	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
TERTU_3561	COG0860	N-Acetylmuramoyl-L-alanine amidase
TERTU_3562	COG0802	atpase or kinase
TERTU_3563	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
TERTU_3563	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
TERTU_3569	COG1162	GTPase activity
TERTU_3571	COG0688	phosphatidylethanolamine metabolic process
TERTU_3572	COG0784	Response regulator, receiver
TERTU_3572	COG3437	response regulator, receiver
TERTU_3573	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
TERTU_3575	COG0493	'glutamate synthase
TERTU_3576	COG0070	glutamate synthase
TERTU_3576	COG0069	glutamate synthase activity
TERTU_3576	COG0067	glutamate synthase
TERTU_3578	COG3266	domain, Protein
TERTU_3579	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
TERTU_3580	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
TERTU_3587	COG0254	rRNA binding
TERTU_3589	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
TERTU_3592	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
TERTU_3593	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
TERTU_3595	COG2226	methyltransferase
TERTU_3597	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
TERTU_3598	COG0729	surface antigen
TERTU_3600	COG3591	Belongs to the peptidase S1B family
TERTU_3600	COG4990	cell redox homeostasis
TERTU_3603	COG3693	PFAM glycoside hydrolase, family 10
TERTU_3604	COG1877	trehalose-phosphatase activity
TERTU_3605	COG3387	PFAM Glycoside hydrolase 15-related
TERTU_3606	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
TERTU_3610	COG1404	Belongs to the peptidase S8 family
TERTU_3614	COG1492	cobalamin metabolic process
TERTU_3616	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
TERTU_3617	COG0406	alpha-ribazole phosphatase activity
TERTU_3621	COG0577	efflux transmembrane transporter activity
TERTU_3621	COG1136	(ABC) transporter
TERTU_3622	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
TERTU_3626	COG4251	negative regulation of phosphorylation
TERTU_3627	COG0784	Response regulator, receiver
TERTU_3634	COG0628	permease
TERTU_3665	COG3107	peptidoglycan biosynthetic process
TERTU_3666	COG0792	nuclease activity
TERTU_3667	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
TERTU_3669	COG0183	Belongs to the thiolase family
TERTU_3671	COG1704	LemA family
TERTU_3672	COG0501	Belongs to the peptidase M48B family
TERTU_3675	COG2969	positive regulation of protein catabolic process
TERTU_3676	COG0625	glutathione transferase activity
TERTU_3677	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
TERTU_3678	COG0723	plastoquinol--plastocyanin reductase activity
TERTU_3679	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
TERTU_3680	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
TERTU_3681	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
TERTU_3683	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
TERTU_3684	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
TERTU_3685	COG1053	succinate dehydrogenase
TERTU_3691	COG0697	spore germination
TERTU_3694	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
TERTU_3695	COG5001	Diguanylate cyclase
TERTU_3695	COG3300	MHYT domain
TERTU_3696	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
TERTU_3697	COG3577	Aspartyl protease
TERTU_3698	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
TERTU_3699	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
TERTU_3700	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
TERTU_3701	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
TERTU_3704	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
TERTU_3704	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
TERTU_3705	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
TERTU_3707	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
TERTU_3709	COG0488	(ABC) transporter
TERTU_3713	COG1192	Involved in chromosome partitioning
TERTU_3717	COG1566	PFAM secretion protein HlyD family protein
TERTU_3719	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
TERTU_3731	COG3501	Rhs element vgr protein
TERTU_3739	COG2197	response regulator
TERTU_3760	COG1280	lysine exporter protein (LysE YggA)
TERTU_3762	COG1280	lysine exporter protein (LysE YggA)
TERTU_3764	COG1280	lysine exporter protein (LysE YggA)
TERTU_3765	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
TERTU_3776	COG4771	TonB-dependent receptor
TERTU_3777	COG0457	Tetratricopeptide repeat
TERTU_3778	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
TERTU_3783	COG3693	PFAM glycoside hydrolase, family 10
TERTU_3789	COG0346	lactoylglutathione lyase activity
TERTU_3792	COG1278	Cold shock
TERTU_3794	COG0084	hydrolase, TatD family'
TERTU_3798	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
TERTU_3806	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
TERTU_3808	COG2311	Membrane
TERTU_3809	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
TERTU_3810	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
TERTU_3811	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
TERTU_3817	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
TERTU_3819	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
TERTU_3820	COG1137	ATPase activity
TERTU_3824	COG1660	Displays ATPase and GTPase activities
TERTU_3826	COG2239	Acts as a magnesium transporter
TERTU_3827	COG3028	Belongs to the UPF0307 family
TERTU_3828	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
TERTU_3830	COG1530	ribonuclease E activity
TERTU_3831	COG0424	maF-like protein
TERTU_3833	COG1792	Involved in formation and maintenance of cell shape
TERTU_3834	COG1077	Cell shape determining protein MreB Mrl
TERTU_3835	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
TERTU_3836	COG0154	amidase activity
TERTU_3837	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
TERTU_3839	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
TERTU_3842	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
TERTU_3844	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
TERTU_3845	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
TERTU_3851	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
TERTU_3852	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
TERTU_3853	COG0193	aminoacyl-tRNA hydrolase activity
TERTU_3865	COG4771	TonB-dependent receptor
TERTU_3869	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
TERTU_3872	COG0596	Alpha beta hydrolase
TERTU_3874	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
TERTU_3875	COG1702	phosphate starvation-inducible protein PhoH
TERTU_3877	COG4535	Mg2 and Co2 transporter CorC
TERTU_3879	COG2010	Cytochrome c
TERTU_3885	COG0495	leucyl-tRNA aminoacylation
TERTU_3886	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
TERTU_3887	COG1466	dna polymerase III delta subunit
TERTU_3889	COG5265	(ABC) transporter
TERTU_3893	COG0432	Pfam Uncharacterised protein family UPF0047
TERTU_3894	COG1132	(ABC) transporter
TERTU_3895	COG0583	DNA-binding transcription factor activity
TERTU_3898	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
TERTU_3902	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
TERTU_3906	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
TERTU_3907	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
TERTU_3908	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
TERTU_3909	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
TERTU_3911	COG0514	ATP-dependent DNA helicase (RecQ)
TERTU_3912	COG0732	type I restriction modification DNA specificity domain
TERTU_3913	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
TERTU_3920	COG3150	esterase
TERTU_3921	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
TERTU_3923	COG0494	nUDIX hydrolase
TERTU_3924	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
TERTU_3925	COG0351	phosphomethylpyrimidine kinase
TERTU_3927	COG1538	Outer membrane efflux protein
TERTU_3928	COG2183	response to ionizing radiation
TERTU_3930	COG1846	Transcriptional regulator
TERTU_3938	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
TERTU_3942	COG1297	OPT oligopeptide transporter protein
TERTU_3943	COG3236	hydrolase activity, hydrolyzing N-glycosyl compounds
TERTU_3945	COG3012	SEC-C Motif Domain Protein
TERTU_3946	COG1595	DNA-templated transcription, initiation
TERTU_3947	COG2304	oxidoreductase activity
TERTU_3956	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
TERTU_3958	COG3706	GGDEF domain
TERTU_3960	COG0840	transmembrane signaling receptor activity
TERTU_3961	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
TERTU_3963	COG1132	(ABC) transporter
TERTU_3964	COG1519	Transferase
TERTU_3969	COG0126	phosphoglycerate kinase activity
TERTU_3970	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
TERTU_3973	COG1262	PFAM Formylglycine-generating sulfatase enzyme
TERTU_3974	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
TERTU_3976	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
TERTU_3977	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
TERTU_3978	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
TERTU_3979	COG1385	rRNA (uridine-N3-)-methyltransferase activity
TERTU_3983	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
TERTU_3984	COG5002	protein histidine kinase activity
TERTU_3984	COG5001	Diguanylate cyclase
TERTU_3988	COG1115	amino acid carrier protein
TERTU_3995	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
TERTU_3996	COG5297	Belongs to the glycosyl hydrolase family 6
TERTU_3999	COG0454	-acetyltransferase
TERTU_4004	COG1012	belongs to the aldehyde dehydrogenase family
TERTU_4005	COG0006	proline dipeptidase activity
TERTU_4006	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
TERTU_4007	COG1473	amidohydrolase
TERTU_4015	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
TERTU_4023	COG0583	DNA-binding transcription factor activity
TERTU_4024	COG1028	Short-chain dehydrogenase reductase Sdr
TERTU_4025	COG1131	(ABC) transporter
TERTU_4026	COG0842	Transport permease protein
TERTU_4031	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
TERTU_4032	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
TERTU_4034	COG4890	Cyd operon protein YbgT
TERTU_4035	COG1294	oxidase, subunit
TERTU_4037	COG2202	Pas domain
TERTU_4037	COG2205	protein histidine kinase activity
TERTU_4039	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
TERTU_4049	COG1309	transcriptional regulator
TERTU_4051	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
TERTU_4055	COG4771	TonB-dependent receptor
TERTU_4059	COG1169	isochorismate synthase
TERTU_4060	COG1021	2,3-dihydroxybenzoate-AMP ligase
TERTU_4061	COG1535	isochorismatase
TERTU_4061	COG3433	isochorismatase activity
TERTU_4062	COG1028	Short-chain dehydrogenase reductase Sdr
TERTU_4063	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
TERTU_4064	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
TERTU_4065	COG2382	esterase
TERTU_4066	COG3251	PFAM MbtH domain protein
TERTU_4068	COG0477	Major facilitator Superfamily
TERTU_4071	COG2885	chlorophyll binding
TERTU_4080	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
TERTU_4086	COG1472	Belongs to the glycosyl hydrolase 3 family
TERTU_4087	COG4771	TonB-dependent receptor
TERTU_4088	COG3279	Response regulator of the LytR AlgR family
TERTU_4089	COG3275	phosphorelay sensor kinase activity
TERTU_4091	COG3345	alpha-galactosidase
TERTU_4094	COG4124	Belongs to the glycosyl hydrolase 26 family
TERTU_4096	COG2152	Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose
TERTU_4097	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
TERTU_4107	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
TERTU_4144	COG0758	DNA mediated transformation
TERTU_4160	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
TERTU_4161	COG2815	serine threonine protein kinase
TERTU_4161	COG0515	serine threonine protein kinase
TERTU_4162	COG2116	formate transmembrane transporter activity
TERTU_4165	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
TERTU_4168	COG3064	Membrane
TERTU_4180	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
TERTU_4183	COG0347	Belongs to the P(II) protein family
TERTU_4184	COG0004	ammonium transporteR
TERTU_4185	COG0347	Belongs to the P(II) protein family
TERTU_4188	COG1733	regulation of RNA biosynthetic process
TERTU_4194	COG3039	Transposase
TERTU_4195	COG3039	Transposase
TERTU_4196	COG0410	ABC transporter
TERTU_4197	COG0411	ABC transporter
TERTU_4198	COG1172	Belongs to the binding-protein-dependent transport system permease family
TERTU_4204	COG0830	nickel cation binding
TERTU_4205	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
TERTU_4206	COG0804	urea catabolic process
TERTU_4207	COG0832	Belongs to the urease beta subunit family
TERTU_4208	COG0831	urea catabolic process
TERTU_4209	COG0829	nickel cation binding
TERTU_4210	COG0754	glutathionylspermidine amidase activity
TERTU_4212	COG3766	membrane
TERTU_4217	COG1842	Phage shock protein A
TERTU_4222	COG3507	Belongs to the glycosyl hydrolase 43 family
TERTU_4225	COG3509	depolymerase
TERTU_4225	COG3693	PFAM glycoside hydrolase, family 10
TERTU_4228	COG1957	nucleoside hydrolase
TERTU_4229	COG2072	flavoprotein involved in K transport
TERTU_4231	COG2144	transferase activity, transferring acyl groups
TERTU_4237	COG3604	Transcriptional regulator
TERTU_4238	COG3693	PFAM glycoside hydrolase, family 10
TERTU_4238	COG3509	depolymerase
TERTU_4241	COG2755	lipolytic protein G-D-S-L family
TERTU_4247	COG3209	COG3209 Rhs family protein
TERTU_4254	COG0745	RESPONSE REGULATOR receiver
TERTU_4256	COG5002	protein histidine kinase activity
TERTU_4256	COG0784	Response regulator, receiver
TERTU_4256	COG2198	Histidine kinase
TERTU_4257	COG0683	leucine binding
TERTU_4261	COG0410	ABC transporter
TERTU_4270	COG5001	Diguanylate cyclase
TERTU_4274	COG3237	CsbD-like
TERTU_4280	COG0392	lysyltransferase activity
TERTU_4281	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
TERTU_4282	COG3568	Endonuclease Exonuclease Phosphatase
TERTU_4286	COG1028	Short-chain dehydrogenase reductase Sdr
TERTU_4288	COG0546	phosphoglycolate phosphatase activity
TERTU_4288	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
TERTU_4294	COG2264	protein methyltransferase activity
TERTU_4301	COG0367	asparagine synthase
TERTU_4302	COG0482	sulfurtransferase activity
TERTU_4317	COG1215	transferase activity, transferring glycosyl groups
TERTU_4320	COG0175	sulfate reduction
TERTU_4321	COG1218	3'(2'),5'-bisphosphate nucleotidase
TERTU_4327	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
TERTU_4328	COG1088	dTDP-glucose 4,6-dehydratase activity
TERTU_4338	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
TERTU_4342	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
TERTU_4344	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
TERTU_4348	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
TERTU_4351	COG0446	pyridine nucleotide-disulphide oxidoreductase
TERTU_4352	COG5001	Diguanylate cyclase
TERTU_4353	COG1349	DNA-binding transcription factor activity
TERTU_4354	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
TERTU_4357	COG0464	growth
TERTU_4359	COG1404	Belongs to the peptidase S8 family
TERTU_4381	COG0643	Histidine kinase
TERTU_4381	COG2198	Histidine kinase
TERTU_4383	COG0835	chemotaxis
TERTU_4384	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
TERTU_4385	COG2201	protein-glutamate methylesterase activity
TERTU_4386	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
TERTU_4391	COG0642	Histidine kinase
TERTU_4392	COG0745	RESPONSE REGULATOR receiver
TERTU_4393	COG4948	Mandelate Racemase Muconate Lactonizing
TERTU_4402	COG1858	cytochrome C peroxidase
TERTU_4409	COG0346	lactoylglutathione lyase activity
TERTU_4412	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
TERTU_4417	COG1609	Transcriptional regulator
TERTU_4420	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
TERTU_4420	COG0301	tRNA thio-modification
TERTU_4423	COG3852	Histidine kinase
TERTU_4425	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
TERTU_4426	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
TERTU_4427	COG0588	phosphoglycerate mutase activity
TERTU_4429	COG0793	Belongs to the peptidase S41A family
TERTU_4430	COG2861	carbohydrate metabolic process
TERTU_4433	COG0745	RESPONSE REGULATOR receiver
TERTU_4436	COG0668	transmembrane transport
TERTU_4503	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
TERTU_4509	COG0438	transferase activity, transferring glycosyl groups
TERTU_4524	COG0318	PFAM AMP-dependent synthetase and ligase
TERTU_4525	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
TERTU_4531	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
TERTU_4534	COG2193	ferroxidase activity
TERTU_4543	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
TERTU_4545	COG0339	signal peptide processing
TERTU_4547	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
TERTU_4548	COG2897	thiosulfate sulfurtransferase activity
TERTU_4549	COG2356	endonuclease I
TERTU_4553	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
TERTU_4564	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
TERTU_4565	COG0776	regulation of translation
TERTU_4566	COG1301	dicarboxylic acid transport
TERTU_4575	COG3022	response to hydroperoxide
TERTU_4577	COG4783	chaperone-mediated protein folding
TERTU_4583	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
TERTU_4585	COG0573	inorganic phosphate transmembrane transporter activity
TERTU_4588	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
TERTU_4589	COG1607	acyl-coa hydrolase
TERTU_4590	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
TERTU_4594	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
TERTU_4595	COG2827	Endonuclease containing a URI domain
TERTU_4596	COG2962	Rard protein
TERTU_4598	COG3706	GGDEF domain
TERTU_4599	COG5001	Diguanylate cyclase
TERTU_4599	COG3300	MHYT domain
TERTU_4601	COG2808	Putative FMN-binding domain
TERTU_4607	COG2814	Major facilitator Superfamily
TERTU_4618	COG4771	TonB-dependent receptor
TERTU_4632	COG0583	DNA-binding transcription factor activity
TERTU_4635	COG2081	HI0933 family
TERTU_4636	COG4452	Inner membrane protein CreD
TERTU_4637	COG0667	Aldo Keto reductase
TERTU_4638	COG2354	Protein conserved in bacteria
TERTU_4641	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
TERTU_4642	COG0071	Belongs to the small heat shock protein (HSP20) family
TERTU_4643	COG0071	Belongs to the small heat shock protein (HSP20) family
TERTU_4644	COG0218	Necessary for normal cell division and for the maintenance of normal septation
TERTU_4647	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
TERTU_4650	COG3706	GGDEF domain
TERTU_4650	COG0745	RESPONSE REGULATOR receiver
TERTU_4651	COG2205	protein histidine kinase activity
TERTU_4651	COG0784	Response regulator, receiver
TERTU_4651	COG5002	protein histidine kinase activity
TERTU_4660	COG0210	DNA helicase
TERTU_4661	COG1858	cytochrome C peroxidase
TERTU_4664	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
TERTU_4667	COG2017	converts alpha-aldose to the beta-anomer
TERTU_4673	COG1136	(ABC) transporter
TERTU_4673	COG0577	efflux transmembrane transporter activity
TERTU_4674	COG1136	(ABC) transporter
TERTU_4682	COG0745	RESPONSE REGULATOR receiver
TERTU_4682	COG3706	GGDEF domain
TERTU_4683	COG1942	4-Oxalocrotonate Tautomerase
TERTU_4685	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
TERTU_4688	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
TERTU_4689	COG0583	DNA-binding transcription factor activity
TERTU_4690	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
TERTU_4691	COG0243	molybdopterin cofactor binding
TERTU_4697	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
TERTU_4703	COG1733	regulation of RNA biosynthetic process
TERTU_4715	COG0355	proton-transporting ATP synthase activity, rotational mechanism
TERTU_4716	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
TERTU_4717	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
TERTU_4718	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
TERTU_4719	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
TERTU_4720	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
TERTU_4722	COG0356	it plays a direct role in the translocation of protons across the membrane
TERTU_4726	COG1475	DNA binding
TERTU_4727	COG1192	Involved in chromosome partitioning
TERTU_4728	COG0357	Ribosomal RNA small subunit methyltransferase G
TERTU_4733	COG3275	phosphorelay sensor kinase activity
TERTU_4735	COG0445	tRNA wobble uridine modification
TERTU_4736	COG3279	Response regulator of the LytR AlgR family
TERTU_4738	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
TERTU_4739	COG0706	membrane insertase activity
TERTU_4740	COG0594	ribonuclease P activity